Query 035840
Match_columns 213
No_of_seqs 130 out of 2221
Neff 8.9
Searched_HMMs 29240
Date Mon Mar 25 11:25:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/035840.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/035840hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4hg2_A Methyltransferase type 100.0 2.4E-36 8.3E-41 245.6 19.2 196 1-212 57-252 (257)
2 3g5t_A Trans-aconitate 3-methy 99.9 1.2E-25 4.1E-30 185.7 15.5 199 3-211 59-298 (299)
3 2yqz_A Hypothetical protein TT 99.8 3.2E-19 1.1E-23 143.7 10.6 192 2-212 58-263 (263)
4 3ccf_A Cyclopropane-fatty-acyl 99.7 1.2E-17 4.2E-22 136.2 10.1 191 3-213 77-279 (279)
5 2p35_A Trans-aconitate 2-methy 99.7 1.6E-16 5.4E-21 127.7 13.5 188 5-212 57-259 (259)
6 1vl5_A Unknown conserved prote 99.7 2.3E-16 7.8E-21 127.2 11.2 185 2-212 56-252 (260)
7 1xxl_A YCGJ protein; structura 99.6 1.6E-15 5.6E-20 120.9 12.7 184 2-212 40-237 (239)
8 1pjz_A Thiopurine S-methyltran 99.4 6.3E-14 2.2E-18 109.3 4.2 78 1-86 40-139 (203)
9 2o57_A Putative sarcosine dime 99.4 4.1E-13 1.4E-17 110.1 8.6 77 5-89 105-189 (297)
10 3bus_A REBM, methyltransferase 99.4 7.6E-13 2.6E-17 107.0 9.8 77 5-89 84-168 (273)
11 3mgg_A Methyltransferase; NYSG 99.4 4.4E-12 1.5E-16 102.7 12.4 77 5-89 61-144 (276)
12 4gek_A TRNA (CMO5U34)-methyltr 99.4 1E-12 3.4E-17 106.5 8.2 75 5-89 96-180 (261)
13 2p7i_A Hypothetical protein; p 99.4 1.2E-12 4.1E-17 103.8 7.1 81 2-91 61-145 (250)
14 3h2b_A SAM-dependent methyltra 99.3 1.2E-12 4E-17 101.4 6.6 81 2-90 60-144 (203)
15 3l8d_A Methyltransferase; stru 99.3 2.6E-12 8.9E-17 101.9 8.4 80 2-89 72-155 (242)
16 2gb4_A Thiopurine S-methyltran 99.3 8.4E-13 2.9E-17 106.5 5.5 78 1-86 86-190 (252)
17 3g5l_A Putative S-adenosylmeth 99.3 2E-12 6.8E-17 103.5 7.5 79 3-89 64-147 (253)
18 2aot_A HMT, histamine N-methyl 99.3 1.2E-12 4E-17 107.4 6.1 74 8-89 85-174 (292)
19 3kkz_A Uncharacterized protein 99.3 2.5E-12 8.6E-17 103.9 7.3 75 6-88 70-151 (267)
20 3ege_A Putative methyltransfer 99.3 2.8E-12 9.7E-17 103.4 7.5 80 2-90 53-133 (261)
21 3f4k_A Putative methyltransfer 99.3 3E-12 1E-16 102.5 7.2 78 3-88 66-151 (257)
22 2gs9_A Hypothetical protein TT 99.3 5.7E-12 1.9E-16 98.1 8.6 76 6-89 57-134 (211)
23 4htf_A S-adenosylmethionine-de 99.3 1.8E-12 6.2E-17 105.7 5.8 80 2-89 87-175 (285)
24 3dh0_A SAM dependent methyltra 99.3 3.9E-12 1.3E-16 99.4 7.4 76 6-89 63-145 (219)
25 3ujc_A Phosphoethanolamine N-m 99.3 3.9E-12 1.3E-16 102.1 7.3 77 5-89 78-161 (266)
26 1nkv_A Hypothetical protein YJ 99.3 2.2E-12 7.5E-17 103.3 5.8 74 5-87 59-140 (256)
27 3vc1_A Geranyl diphosphate 2-C 99.3 4.1E-12 1.4E-16 105.1 7.6 77 5-89 140-223 (312)
28 3dlc_A Putative S-adenosyl-L-m 99.3 8.1E-12 2.8E-16 97.2 8.7 77 5-89 66-150 (219)
29 4fsd_A Arsenic methyltransfera 99.3 8.3E-12 2.8E-16 106.3 9.2 76 5-88 108-204 (383)
30 3ofk_A Nodulation protein S; N 99.3 7E-12 2.4E-16 97.9 7.6 79 2-89 70-156 (216)
31 2p8j_A S-adenosylmethionine-de 99.3 6.5E-12 2.2E-16 97.4 6.9 79 3-89 44-130 (209)
32 3pfg_A N-methyltransferase; N, 99.3 1E-11 3.5E-16 99.9 8.1 81 2-91 69-155 (263)
33 3bkw_A MLL3908 protein, S-aden 99.3 1.2E-11 4.3E-16 97.9 8.3 78 4-89 64-146 (243)
34 3hnr_A Probable methyltransfer 99.3 1E-11 3.5E-16 97.1 7.7 79 2-89 64-147 (220)
35 3ou2_A SAM-dependent methyltra 99.2 2E-11 6.8E-16 95.1 8.4 81 2-91 65-150 (218)
36 3dli_A Methyltransferase; PSI- 99.2 7.3E-12 2.5E-16 99.6 5.8 79 2-90 60-143 (240)
37 3sm3_A SAM-dependent methyltra 99.2 2.8E-11 9.7E-16 95.1 9.0 82 2-91 49-145 (235)
38 3dtn_A Putative methyltransfer 99.2 2.8E-11 9.7E-16 95.5 8.3 78 5-91 68-152 (234)
39 3gu3_A Methyltransferase; alph 99.2 2E-11 6.8E-16 99.7 7.5 76 5-89 47-128 (284)
40 1p91_A Ribosomal RNA large sub 99.2 5.2E-11 1.8E-15 96.1 9.5 73 5-91 109-182 (269)
41 2ld4_A Anamorsin; methyltransf 99.2 4.6E-12 1.6E-16 96.0 3.0 69 10-86 25-100 (176)
42 3i9f_A Putative type 11 methyl 99.2 2.1E-11 7.3E-16 91.6 6.6 77 2-89 36-114 (170)
43 3e23_A Uncharacterized protein 99.2 1.2E-11 4.2E-16 96.2 5.4 78 2-88 62-142 (211)
44 3thr_A Glycine N-methyltransfe 99.2 1.3E-11 4.6E-16 100.7 5.4 80 2-89 76-177 (293)
45 1xtp_A LMAJ004091AAA; SGPP, st 99.2 2.4E-11 8.3E-16 96.9 6.7 76 5-88 116-198 (254)
46 3e8s_A Putative SAM dependent 99.2 2.7E-11 9.2E-16 94.7 6.8 84 2-90 71-155 (227)
47 2vdw_A Vaccinia virus capping 99.2 3.1E-11 1E-15 99.8 7.2 82 4-89 70-171 (302)
48 1ve3_A Hypothetical protein PH 99.2 2.6E-11 8.9E-16 95.1 6.5 80 2-89 57-144 (227)
49 2xvm_A Tellurite resistance pr 99.2 4.6E-11 1.6E-15 91.7 7.7 78 2-88 51-137 (199)
50 2avn_A Ubiquinone/menaquinone 99.2 4E-11 1.4E-15 96.5 7.3 80 2-89 73-154 (260)
51 3jwg_A HEN1, methyltransferase 99.2 3.8E-11 1.3E-15 93.9 6.5 74 6-87 54-141 (219)
52 2g72_A Phenylethanolamine N-me 99.2 2.2E-11 7.4E-16 99.6 5.3 76 4-87 93-215 (289)
53 3lcc_A Putative methyl chlorid 99.2 5.7E-11 1.9E-15 94.0 7.0 79 2-89 85-173 (235)
54 3jwh_A HEN1; methyltransferase 99.2 3.3E-11 1.1E-15 94.2 5.6 74 6-87 54-141 (217)
55 2ex4_A Adrenal gland protein A 99.1 7.3E-11 2.5E-15 93.8 7.6 77 5-89 102-187 (241)
56 3g2m_A PCZA361.24; SAM-depende 99.1 6E-11 2E-15 97.4 7.0 79 2-89 101-192 (299)
57 3g07_A 7SK snRNA methylphospha 99.1 4.7E-11 1.6E-15 98.0 6.1 59 26-87 155-220 (292)
58 2a14_A Indolethylamine N-methy 99.1 3.1E-11 1E-15 97.6 4.2 76 5-88 78-198 (263)
59 2pxx_A Uncharacterized protein 99.1 7.2E-11 2.5E-15 91.6 5.9 77 7-91 67-163 (215)
60 1vlm_A SAM-dependent methyltra 99.1 1.9E-10 6.6E-15 90.1 8.3 72 9-89 69-141 (219)
61 2qe6_A Uncharacterized protein 99.1 2.4E-10 8.2E-15 93.1 8.5 85 5-90 104-199 (274)
62 1ri5_A MRNA capping enzyme; me 99.1 9.3E-11 3.2E-15 95.6 5.3 76 6-89 88-176 (298)
63 1y8c_A S-adenosylmethionine-de 99.1 1.1E-10 3.6E-15 92.5 5.5 79 2-89 56-144 (246)
64 3bxo_A N,N-dimethyltransferase 99.1 1.5E-10 5.3E-15 91.3 6.4 79 2-89 59-143 (239)
65 3hem_A Cyclopropane-fatty-acyl 99.1 1.5E-10 5.1E-15 95.1 6.5 76 5-91 95-187 (302)
66 3cc8_A Putative methyltransfer 99.1 2.7E-10 9.3E-15 89.1 7.7 77 4-89 53-132 (230)
67 3ocj_A Putative exported prote 99.1 2.7E-10 9.1E-15 93.9 7.8 78 5-91 143-231 (305)
68 1af7_A Chemotaxis receptor met 99.1 3.3E-10 1.1E-14 92.3 8.1 71 7-85 139-250 (274)
69 3mti_A RRNA methylase; SAM-dep 99.1 2.7E-10 9.3E-15 86.7 7.2 80 2-89 41-137 (185)
70 2kw5_A SLR1183 protein; struct 99.1 1.2E-10 4.2E-15 89.8 5.2 80 2-90 48-134 (202)
71 2i62_A Nicotinamide N-methyltr 99.1 2.4E-10 8.2E-15 91.6 7.1 79 2-88 75-199 (265)
72 3ggd_A SAM-dependent methyltra 99.1 7.6E-11 2.6E-15 93.8 4.0 82 2-91 75-167 (245)
73 1kpg_A CFA synthase;, cyclopro 99.1 2.7E-10 9.3E-15 92.7 7.4 74 5-89 87-170 (287)
74 3cgg_A SAM-dependent methyltra 99.1 4.5E-10 1.5E-14 85.5 8.0 79 3-89 66-149 (195)
75 1zx0_A Guanidinoacetate N-meth 99.1 5.6E-11 1.9E-15 94.3 3.0 76 6-89 84-172 (236)
76 4e2x_A TCAB9; kijanose, tetron 99.1 8.8E-11 3E-15 100.8 4.4 83 2-88 126-209 (416)
77 3m70_A Tellurite resistance pr 99.0 2E-10 7E-15 93.5 6.2 78 2-88 139-224 (286)
78 3fpf_A Mtnas, putative unchara 99.0 5.3E-10 1.8E-14 91.7 8.6 72 5-88 146-223 (298)
79 2fk8_A Methoxy mycolic acid sy 99.0 3.1E-10 1.1E-14 93.8 6.9 76 5-91 113-198 (318)
80 3m33_A Uncharacterized protein 99.0 2.5E-10 8.6E-15 90.0 6.0 71 2-84 67-139 (226)
81 3bgv_A MRNA CAP guanine-N7 met 99.0 2.3E-10 7.8E-15 94.5 5.9 77 5-89 57-157 (313)
82 3orh_A Guanidinoacetate N-meth 99.0 5.9E-11 2E-15 94.5 1.7 77 5-87 83-170 (236)
83 3d2l_A SAM-dependent methyltra 99.0 5.5E-10 1.9E-14 88.3 7.1 77 2-88 52-138 (243)
84 3dmg_A Probable ribosomal RNA 99.0 1.1E-09 3.8E-14 93.2 7.9 93 2-102 252-355 (381)
85 3htx_A HEN1; HEN1, small RNA m 99.0 1.6E-09 5.5E-14 99.2 9.1 79 2-89 740-836 (950)
86 2fca_A TRNA (guanine-N(7)-)-me 99.0 9.5E-10 3.3E-14 86.1 6.4 77 5-89 62-155 (213)
87 3dxy_A TRNA (guanine-N(7)-)-me 98.9 9.5E-10 3.2E-14 86.6 6.3 76 6-89 59-152 (218)
88 4df3_A Fibrillarin-like rRNA/T 98.9 2.2E-09 7.6E-14 85.3 8.1 77 5-87 102-182 (233)
89 3bkx_A SAM-dependent methyltra 98.9 5.2E-10 1.8E-14 90.3 4.5 80 6-90 69-162 (275)
90 3e05_A Precorrin-6Y C5,15-meth 98.9 3.6E-09 1.2E-13 81.8 8.5 74 6-89 65-144 (204)
91 1wzn_A SAM-dependent methyltra 98.9 1.7E-09 5.8E-14 86.2 6.7 76 2-86 60-144 (252)
92 1dus_A MJ0882; hypothetical pr 98.9 3.3E-09 1.1E-13 80.6 7.7 79 2-89 71-159 (194)
93 2zfu_A Nucleomethylin, cerebra 98.9 2.1E-09 7.2E-14 83.7 6.5 67 6-89 87-153 (215)
94 3ckk_A TRNA (guanine-N(7)-)-me 98.9 2.7E-09 9.1E-14 85.0 7.2 76 6-89 71-170 (235)
95 1xdz_A Methyltransferase GIDB; 98.9 2.1E-09 7.2E-14 85.4 6.0 73 4-87 93-174 (240)
96 3giw_A Protein of unknown func 98.9 1.1E-09 3.7E-14 89.0 3.9 84 5-90 105-203 (277)
97 1yzh_A TRNA (guanine-N(7)-)-me 98.9 7.9E-09 2.7E-13 80.6 8.7 76 5-88 65-157 (214)
98 3hm2_A Precorrin-6Y C5,15-meth 98.9 4.3E-09 1.5E-13 79.2 6.9 74 5-89 49-129 (178)
99 3p9n_A Possible methyltransfer 98.9 2.4E-09 8.2E-14 81.9 5.5 77 5-89 67-155 (189)
100 3iv6_A Putative Zn-dependent a 98.9 1.9E-09 6.4E-14 87.2 5.1 78 1-87 63-148 (261)
101 3njr_A Precorrin-6Y methylase; 98.9 7.1E-09 2.4E-13 80.6 8.2 76 2-89 74-156 (204)
102 1nt2_A Fibrillarin-like PRE-rR 98.9 3.5E-09 1.2E-13 82.8 6.5 74 6-86 82-160 (210)
103 3sso_A Methyltransferase; macr 98.9 5.3E-10 1.8E-14 95.1 1.7 72 5-88 247-325 (419)
104 1fbn_A MJ fibrillarin homologu 98.8 5.9E-09 2E-13 82.3 7.3 67 6-86 99-177 (230)
105 3lbf_A Protein-L-isoaspartate 98.8 4.1E-09 1.4E-13 81.7 5.8 75 2-89 96-176 (210)
106 3mq2_A 16S rRNA methyltransfer 98.8 2.5E-09 8.6E-14 83.5 4.3 73 5-86 51-139 (218)
107 2ift_A Putative methylase HI07 98.8 2.1E-09 7.2E-14 83.3 3.5 77 5-89 76-165 (201)
108 2fpo_A Methylase YHHF; structu 98.8 8E-09 2.7E-13 80.1 6.0 77 5-89 77-162 (202)
109 2fyt_A Protein arginine N-meth 98.8 7.3E-09 2.5E-13 86.8 5.8 70 6-84 88-168 (340)
110 3evz_A Methyltransferase; NYSG 98.8 1.2E-08 4.1E-13 80.2 6.7 76 5-87 79-179 (230)
111 3eey_A Putative rRNA methylase 98.8 7.2E-09 2.5E-13 79.5 5.3 76 6-89 48-141 (197)
112 3q7e_A Protein arginine N-meth 98.7 1.6E-08 5.6E-13 84.9 7.5 71 5-84 89-170 (349)
113 3uwp_A Histone-lysine N-methyl 98.7 3.5E-09 1.2E-13 90.4 3.2 76 6-89 198-290 (438)
114 2pwy_A TRNA (adenine-N(1)-)-me 98.7 1.8E-08 6.3E-13 80.3 6.9 73 5-89 121-200 (258)
115 1fp1_D Isoliquiritigenin 2'-O- 98.7 1.3E-08 4.4E-13 86.1 6.3 72 6-89 234-308 (372)
116 3p2e_A 16S rRNA methylase; met 98.7 6.7E-09 2.3E-13 82.1 4.2 75 4-86 47-138 (225)
117 3q87_B N6 adenine specific DNA 98.7 2.8E-08 9.4E-13 74.9 6.8 74 2-89 42-125 (170)
118 3i53_A O-methyltransferase; CO 98.7 4.5E-08 1.5E-12 81.4 8.6 75 6-91 194-278 (332)
119 3dp7_A SAM-dependent methyltra 98.7 3.4E-08 1.2E-12 83.3 7.8 76 6-91 204-291 (363)
120 1fp2_A Isoflavone O-methyltran 98.7 2.7E-08 9.4E-13 83.4 7.1 72 6-89 213-290 (352)
121 1ej0_A FTSJ; methyltransferase 98.7 7.9E-09 2.7E-13 77.1 3.4 73 6-91 48-140 (180)
122 2pjd_A Ribosomal RNA small sub 98.7 1.5E-08 5E-13 85.0 5.3 87 6-102 221-318 (343)
123 3hp7_A Hemolysin, putative; st 98.7 1.4E-08 4.9E-13 83.1 4.9 75 5-86 108-184 (291)
124 1vbf_A 231AA long hypothetical 98.7 1.5E-08 5.2E-13 79.6 4.8 75 2-89 89-167 (231)
125 3g89_A Ribosomal RNA small sub 98.7 2.9E-08 1E-12 79.6 6.5 72 5-87 104-184 (249)
126 1yb2_A Hypothetical protein TA 98.7 2.4E-08 8.2E-13 81.0 6.0 72 5-89 135-213 (275)
127 4dcm_A Ribosomal RNA large sub 98.7 2.6E-08 9E-13 84.5 6.5 89 5-102 246-349 (375)
128 1l3i_A Precorrin-6Y methyltran 98.6 2.4E-08 8.1E-13 75.6 4.9 77 2-89 52-136 (192)
129 3grz_A L11 mtase, ribosomal pr 98.6 1.9E-08 6.5E-13 77.7 4.2 73 5-89 83-161 (205)
130 2fhp_A Methylase, putative; al 98.6 1.7E-08 5.9E-13 76.4 3.9 81 5-89 67-156 (187)
131 3reo_A (ISO)eugenol O-methyltr 98.6 7.1E-08 2.4E-12 81.5 8.1 74 6-91 228-304 (368)
132 1dl5_A Protein-L-isoaspartate 98.6 2.4E-08 8.3E-13 82.7 5.1 71 6-89 101-177 (317)
133 2yxe_A Protein-L-isoaspartate 98.6 2.3E-08 8E-13 77.7 4.7 71 6-89 103-179 (215)
134 3gdh_A Trimethylguanosine synt 98.6 1.3E-09 4.5E-14 86.4 -2.6 75 2-85 97-179 (241)
135 3p9c_A Caffeic acid O-methyltr 98.6 7.6E-08 2.6E-12 81.3 8.1 74 6-91 226-302 (364)
136 2bm8_A Cephalosporin hydroxyla 98.6 1.3E-08 4.5E-13 80.9 3.1 74 5-88 109-188 (236)
137 2r3s_A Uncharacterized protein 98.6 7.3E-08 2.5E-12 79.9 7.4 77 5-91 189-275 (335)
138 3mb5_A SAM-dependent methyltra 98.6 7.5E-08 2.6E-12 76.8 7.1 72 5-89 118-196 (255)
139 1ws6_A Methyltransferase; stru 98.6 2.7E-08 9.4E-13 74.1 4.2 85 2-91 60-151 (171)
140 1i9g_A Hypothetical protein RV 98.6 5.9E-08 2E-12 78.5 6.5 73 5-89 124-205 (280)
141 1jsx_A Glucose-inhibited divis 98.6 5.6E-08 1.9E-12 75.0 6.0 71 5-87 89-165 (207)
142 2frn_A Hypothetical protein PH 98.6 6.3E-08 2.2E-12 78.8 6.5 76 2-89 144-227 (278)
143 2esr_A Methyltransferase; stru 98.6 1.3E-08 4.4E-13 76.8 2.1 77 5-89 54-140 (177)
144 2ipx_A RRNA 2'-O-methyltransfe 98.6 4.7E-08 1.6E-12 77.1 5.5 75 6-87 103-182 (233)
145 2wa2_A Non-structural protein 98.6 1.7E-08 5.9E-13 82.2 2.9 75 2-89 101-195 (276)
146 3lpm_A Putative methyltransfer 98.6 6.5E-08 2.2E-12 77.7 6.3 78 2-87 68-176 (259)
147 3gwz_A MMCR; methyltransferase 98.6 1.3E-07 4.3E-12 80.0 8.1 75 6-91 227-311 (369)
148 3r0q_C Probable protein argini 98.6 6.5E-08 2.2E-12 82.1 6.3 73 3-85 83-167 (376)
149 2ip2_A Probable phenazine-spec 98.6 9.5E-08 3.3E-12 79.3 6.8 74 6-90 192-275 (334)
150 1g6q_1 HnRNP arginine N-methyl 98.6 1.1E-07 3.9E-12 79.1 7.2 70 6-84 62-142 (328)
151 1g8a_A Fibrillarin-like PRE-rR 98.6 1.4E-07 4.6E-12 74.0 7.2 74 6-86 99-177 (227)
152 3ntv_A MW1564 protein; rossman 98.6 5.9E-08 2E-12 76.7 5.1 74 5-87 95-176 (232)
153 2plw_A Ribosomal RNA methyltra 98.6 7.7E-08 2.6E-12 73.9 5.6 72 5-89 48-156 (201)
154 2oxt_A Nucleoside-2'-O-methylt 98.6 2.4E-08 8.1E-13 80.9 2.8 72 6-89 96-187 (265)
155 2qm3_A Predicted methyltransfe 98.6 1E-07 3.6E-12 80.7 6.9 72 6-85 196-275 (373)
156 3a27_A TYW2, uncharacterized p 98.6 1E-07 3.6E-12 77.3 6.6 72 6-89 144-221 (272)
157 3dr5_A Putative O-methyltransf 98.6 9.9E-08 3.4E-12 75.1 6.2 74 5-87 81-163 (221)
158 3adn_A Spermidine synthase; am 98.5 1.2E-07 4.2E-12 77.8 7.0 76 5-87 107-198 (294)
159 1x19_A CRTF-related protein; m 98.5 1.3E-07 4.4E-12 79.5 7.0 74 6-90 215-298 (359)
160 3u81_A Catechol O-methyltransf 98.5 3.9E-08 1.3E-12 77.0 3.5 82 5-91 83-174 (221)
161 3bwc_A Spermidine synthase; SA 98.5 7E-08 2.4E-12 79.6 5.0 76 5-88 119-211 (304)
162 4azs_A Methyltransferase WBDD; 98.5 2.6E-08 8.8E-13 89.0 2.5 80 1-88 84-174 (569)
163 1zg3_A Isoflavanone 4'-O-methy 98.5 1.4E-07 4.6E-12 79.3 6.8 72 6-89 218-295 (358)
164 2yvl_A TRMI protein, hypotheti 98.5 1.9E-07 6.5E-12 73.9 7.3 74 4-89 112-192 (248)
165 3tfw_A Putative O-methyltransf 98.5 8.3E-08 2.9E-12 76.7 5.1 74 5-88 88-171 (248)
166 2ozv_A Hypothetical protein AT 98.5 1.9E-07 6.4E-12 75.2 7.1 74 6-87 61-170 (260)
167 1qzz_A RDMB, aclacinomycin-10- 98.5 2.6E-07 8.9E-12 77.8 8.3 72 6-88 207-288 (374)
168 3id6_C Fibrillarin-like rRNA/T 98.5 4.6E-07 1.6E-11 71.9 9.0 77 5-88 101-182 (232)
169 2gpy_A O-methyltransferase; st 98.5 6.9E-08 2.3E-12 76.1 4.0 74 5-88 78-161 (233)
170 2vdv_E TRNA (guanine-N(7)-)-me 98.5 3.5E-07 1.2E-11 72.8 8.1 76 6-88 74-174 (246)
171 3c3p_A Methyltransferase; NP_9 98.5 9E-08 3.1E-12 74.2 4.5 73 5-87 81-160 (210)
172 2pbf_A Protein-L-isoaspartate 98.5 8.3E-08 2.8E-12 75.2 4.0 70 6-88 110-194 (227)
173 3mcz_A O-methyltransferase; ad 98.5 1.6E-07 5.4E-12 78.6 5.7 75 6-89 204-289 (352)
174 2b25_A Hypothetical protein; s 98.5 1.1E-07 3.7E-12 79.3 4.4 72 6-89 131-221 (336)
175 1o9g_A RRNA methyltransferase; 98.5 3.8E-07 1.3E-11 72.6 7.4 77 5-89 77-216 (250)
176 1inl_A Spermidine synthase; be 98.4 2.1E-07 7.3E-12 76.4 5.9 75 5-87 114-205 (296)
177 1r18_A Protein-L-isoaspartate( 98.4 2.5E-07 8.4E-12 72.6 5.9 69 6-88 115-195 (227)
178 3tma_A Methyltransferase; thum 98.4 2.7E-07 9.1E-12 77.5 6.3 76 6-89 229-319 (354)
179 1o54_A SAM-dependent O-methylt 98.4 2.1E-07 7.2E-12 75.3 5.4 72 5-89 137-215 (277)
180 1uir_A Polyamine aminopropyltr 98.4 1.7E-07 5.8E-12 77.6 4.9 75 5-87 101-195 (314)
181 3opn_A Putative hemolysin; str 98.4 3.9E-08 1.3E-12 78.1 0.9 77 3-87 57-137 (232)
182 2nxc_A L11 mtase, ribosomal pr 98.4 1.8E-07 6.1E-12 75.1 4.7 77 2-89 139-220 (254)
183 3gjy_A Spermidine synthase; AP 98.4 3.3E-07 1.1E-11 75.9 6.3 76 6-89 114-202 (317)
184 2yxd_A Probable cobalt-precorr 98.4 2.7E-07 9.2E-12 69.2 5.4 73 3-89 55-133 (183)
185 1xj5_A Spermidine synthase 1; 98.4 2.3E-07 7.9E-12 77.5 5.4 74 5-86 144-234 (334)
186 1iy9_A Spermidine synthase; ro 98.4 4.5E-07 1.5E-11 73.7 6.9 77 5-88 99-190 (275)
187 1i1n_A Protein-L-isoaspartate 98.4 2.5E-07 8.6E-12 72.4 5.1 70 6-88 103-183 (226)
188 2y1w_A Histone-arginine methyl 98.4 2.3E-07 7.7E-12 77.9 5.1 70 6-85 74-153 (348)
189 1ixk_A Methyltransferase; open 98.4 5.8E-07 2E-11 74.4 7.3 77 5-89 143-248 (315)
190 3tr6_A O-methyltransferase; ce 98.4 1.1E-07 3.7E-12 74.4 2.8 78 5-89 89-176 (225)
191 3fzg_A 16S rRNA methylase; met 98.4 1.4E-07 4.8E-12 72.4 3.2 76 2-87 71-152 (200)
192 4dzr_A Protein-(glutamine-N5) 98.4 3.2E-08 1.1E-12 76.3 -0.7 80 6-89 55-166 (215)
193 2b3t_A Protein methyltransfera 98.4 4.5E-07 1.5E-11 73.4 6.1 73 5-86 133-237 (276)
194 2o07_A Spermidine synthase; st 98.4 3.9E-07 1.3E-11 75.1 5.6 75 5-87 119-209 (304)
195 2nyu_A Putative ribosomal RNA 98.3 2.5E-07 8.7E-12 70.5 3.8 78 6-91 56-149 (196)
196 1jg1_A PIMT;, protein-L-isoasp 98.3 4.7E-07 1.6E-11 71.4 5.5 70 6-89 115-191 (235)
197 2xyq_A Putative 2'-O-methyl tr 98.3 9.2E-07 3.2E-11 72.4 7.1 83 5-104 92-187 (290)
198 3lst_A CALO1 methyltransferase 98.3 1.1E-06 3.7E-11 73.6 7.6 73 7-91 210-290 (348)
199 3r3h_A O-methyltransferase, SA 98.3 1E-07 3.4E-12 76.0 1.2 74 5-88 85-171 (242)
200 2igt_A SAM dependent methyltra 98.3 2.2E-07 7.4E-12 77.6 3.2 82 2-91 172-276 (332)
201 1tw3_A COMT, carminomycin 4-O- 98.3 1.4E-06 4.8E-11 73.0 8.2 73 6-89 208-290 (360)
202 2cmg_A Spermidine synthase; tr 98.3 7.7E-07 2.6E-11 71.8 6.2 68 5-87 94-171 (262)
203 3duw_A OMT, O-methyltransferas 98.3 3.1E-07 1.1E-11 71.7 3.6 79 5-89 83-169 (223)
204 1sui_A Caffeoyl-COA O-methyltr 98.3 1.8E-07 6.3E-12 74.7 2.1 74 5-87 104-190 (247)
205 2pt6_A Spermidine synthase; tr 98.3 5.6E-07 1.9E-11 74.8 5.0 76 5-88 140-231 (321)
206 2i7c_A Spermidine synthase; tr 98.3 4.6E-07 1.6E-11 73.9 4.4 76 5-88 102-193 (283)
207 1u2z_A Histone-lysine N-methyl 98.3 6.5E-07 2.2E-11 77.2 5.4 76 6-87 267-359 (433)
208 2b2c_A Spermidine synthase; be 98.3 4.7E-07 1.6E-11 75.0 3.8 75 5-87 132-222 (314)
209 3c3y_A Pfomt, O-methyltransfer 98.3 5.3E-07 1.8E-11 71.5 3.9 80 5-88 95-182 (237)
210 2p41_A Type II methyltransfera 98.2 2.8E-07 9.7E-12 76.0 1.6 74 6-89 104-193 (305)
211 2hnk_A SAM-dependent O-methylt 98.2 6.2E-07 2.1E-11 70.9 3.3 81 5-88 85-182 (239)
212 3cbg_A O-methyltransferase; cy 98.2 8.7E-07 3E-11 69.9 4.1 79 5-89 97-184 (232)
213 3ajd_A Putative methyltransfer 98.2 2E-06 6.9E-11 69.6 6.4 76 6-89 109-213 (274)
214 2avd_A Catechol-O-methyltransf 98.2 6.1E-07 2.1E-11 70.2 2.9 78 5-88 94-180 (229)
215 3dou_A Ribosomal RNA large sub 98.2 1.3E-06 4.3E-11 67.2 4.5 77 2-91 44-143 (191)
216 3b3j_A Histone-arginine methyl 98.2 6.3E-07 2.2E-11 78.4 3.1 70 6-85 182-261 (480)
217 1mjf_A Spermidine synthase; sp 98.2 1.3E-06 4.5E-11 71.1 4.8 74 5-87 98-193 (281)
218 1wxx_A TT1595, hypothetical pr 98.2 4.6E-07 1.6E-11 77.0 1.9 79 3-89 229-327 (382)
219 2h00_A Methyltransferase 10 do 98.2 5.2E-07 1.8E-11 71.9 1.9 77 5-86 89-191 (254)
220 3bzb_A Uncharacterized protein 98.1 4E-06 1.4E-10 68.1 6.5 78 6-86 103-204 (281)
221 2frx_A Hypothetical protein YE 98.1 3.8E-06 1.3E-10 73.4 6.6 76 6-89 143-248 (479)
222 2as0_A Hypothetical protein PH 98.1 9.4E-07 3.2E-11 75.3 2.6 77 5-89 240-337 (396)
223 1zq9_A Probable dimethyladenos 98.1 2.7E-06 9.1E-11 69.4 4.6 72 2-83 47-143 (285)
224 2b78_A Hypothetical protein SM 98.1 1.2E-06 3.9E-11 74.6 2.5 81 5-89 235-333 (385)
225 2yxl_A PH0851 protein, 450AA l 98.1 1.1E-05 3.7E-10 69.9 8.6 76 6-89 285-391 (450)
226 2efj_A 3,7-dimethylxanthine me 98.1 6.8E-06 2.3E-10 69.7 6.8 81 7-92 95-230 (384)
227 1nv8_A HEMK protein; class I a 98.0 5E-06 1.7E-10 67.8 5.4 72 5-86 146-248 (284)
228 1ne2_A Hypothetical protein TA 98.0 8.2E-06 2.8E-10 62.5 6.2 69 5-87 74-146 (200)
229 4dmg_A Putative uncharacterize 98.0 5.4E-06 1.8E-10 70.7 5.2 80 2-89 233-328 (393)
230 4hc4_A Protein arginine N-meth 98.0 1.5E-05 5.2E-10 67.5 7.5 69 6-84 107-186 (376)
231 3c0k_A UPF0064 protein YCCW; P 98.0 3.1E-06 1.1E-10 72.1 3.0 80 2-89 239-341 (396)
232 2yx1_A Hypothetical protein MJ 97.9 1.7E-05 5.6E-10 66.2 7.0 73 4-90 215-294 (336)
233 3v97_A Ribosomal RNA large sub 97.9 7E-06 2.4E-10 74.9 5.0 77 5-89 562-659 (703)
234 4a6d_A Hydroxyindole O-methylt 97.9 4.4E-05 1.5E-09 64.0 9.2 73 7-90 205-286 (353)
235 1m6e_X S-adenosyl-L-methionnin 97.9 1.1E-05 3.8E-10 67.8 5.4 79 7-90 93-212 (359)
236 1sqg_A SUN protein, FMU protei 97.9 1.5E-05 5E-10 68.7 5.6 76 6-89 271-376 (429)
237 3m4x_A NOL1/NOP2/SUN family pr 97.8 1.3E-05 4.4E-10 69.6 4.9 76 5-88 130-235 (456)
238 2jjq_A Uncharacterized RNA met 97.8 3.7E-05 1.3E-09 66.1 7.8 74 1-88 308-388 (425)
239 3m6w_A RRNA methylase; rRNA me 97.8 1.3E-05 4.4E-10 69.7 4.6 74 6-88 127-230 (464)
240 2h1r_A Dimethyladenosine trans 97.8 2.5E-05 8.6E-10 64.0 5.5 54 1-63 60-119 (299)
241 1yub_A Ermam, rRNA methyltrans 97.7 9.1E-07 3.1E-11 70.4 -3.9 77 2-87 48-145 (245)
242 1uwv_A 23S rRNA (uracil-5-)-me 97.7 6E-05 2.1E-09 64.9 7.2 81 1-88 304-390 (433)
243 3b5i_A S-adenosyl-L-methionine 97.7 2.1E-05 7.2E-10 66.5 4.0 51 40-91 140-229 (374)
244 3tm4_A TRNA (guanine N2-)-meth 97.7 4.1E-05 1.4E-09 64.7 5.7 64 7-77 243-322 (373)
245 3bt7_A TRNA (uracil-5-)-methyl 97.7 2.8E-05 9.5E-10 65.6 4.6 81 1-89 231-328 (369)
246 3frh_A 16S rRNA methylase; met 97.6 0.0002 7E-09 56.8 7.5 73 5-87 126-206 (253)
247 2f8l_A Hypothetical protein LM 97.6 0.00024 8.3E-09 59.1 8.2 73 6-87 160-256 (344)
248 3k6r_A Putative transferase PH 97.5 0.00029 1E-08 57.1 7.5 71 6-88 149-226 (278)
249 3k0b_A Predicted N6-adenine-sp 97.5 0.00033 1.1E-08 59.6 7.9 75 6-89 264-352 (393)
250 3o4f_A Spermidine synthase; am 97.4 0.00042 1.4E-08 56.6 7.7 76 5-87 107-198 (294)
251 1qam_A ERMC' methyltransferase 97.4 5.2E-05 1.8E-09 60.2 2.2 75 2-85 49-144 (244)
252 3ldg_A Putative uncharacterize 97.4 0.00062 2.1E-08 57.7 8.7 75 6-89 257-345 (384)
253 3lcv_B Sisomicin-gentamicin re 97.4 0.00051 1.7E-08 55.2 7.4 74 5-88 156-237 (281)
254 2qfm_A Spermine synthase; sper 97.3 0.00019 6.5E-09 60.3 4.5 75 6-88 212-315 (364)
255 3lec_A NADB-rossmann superfami 97.3 0.00033 1.1E-08 55.2 5.7 74 6-89 46-127 (230)
256 3gru_A Dimethyladenosine trans 97.3 0.00015 5.1E-09 59.4 3.8 55 2-63 69-127 (295)
257 1wy7_A Hypothetical protein PH 97.3 0.00033 1.1E-08 53.5 5.5 62 5-76 72-141 (207)
258 2okc_A Type I restriction enzy 97.2 0.00075 2.6E-08 58.2 7.5 73 6-87 209-307 (445)
259 3kr9_A SAM-dependent methyltra 97.2 0.00061 2.1E-08 53.5 5.9 74 6-89 40-121 (225)
260 3ldu_A Putative methylase; str 97.2 0.00073 2.5E-08 57.3 6.7 75 6-89 258-346 (385)
261 3gnl_A Uncharacterized protein 97.1 0.00065 2.2E-08 54.0 5.7 75 6-89 46-127 (244)
262 2ih2_A Modification methylase 97.0 0.00062 2.1E-08 57.9 4.6 71 5-87 64-164 (421)
263 3evf_A RNA-directed RNA polyme 96.8 0.00074 2.5E-08 54.4 3.4 76 6-89 99-186 (277)
264 3cvo_A Methyltransferase-like 96.7 0.0066 2.2E-07 46.8 7.7 76 5-85 51-152 (202)
265 3v97_A Ribosomal RNA large sub 96.6 0.0062 2.1E-07 55.6 8.4 76 6-89 257-349 (703)
266 3axs_A Probable N(2),N(2)-dime 96.6 0.0021 7.3E-08 54.5 4.8 74 6-88 78-159 (392)
267 2r6z_A UPF0341 protein in RSP 96.5 0.0006 2E-08 54.6 0.8 54 2-62 102-173 (258)
268 2b9e_A NOL1/NOP2/SUN domain fa 96.3 0.012 4.1E-07 48.2 7.8 45 5-56 127-180 (309)
269 2dul_A N(2),N(2)-dimethylguano 96.3 0.0042 1.4E-07 52.5 4.8 72 6-88 72-165 (378)
270 3tqs_A Ribosomal RNA small sub 96.3 0.0049 1.7E-07 49.2 5.0 50 1-58 47-104 (255)
271 2ar0_A M.ecoki, type I restric 96.2 0.006 2.1E-07 54.0 5.7 75 6-87 212-312 (541)
272 3fut_A Dimethyladenosine trans 96.0 0.0043 1.5E-07 50.0 3.4 55 1-62 64-122 (271)
273 3c6k_A Spermine synthase; sper 95.8 0.0085 2.9E-07 50.5 4.4 78 5-87 228-331 (381)
274 4auk_A Ribosomal RNA large sub 95.7 0.014 4.6E-07 49.1 5.3 67 2-80 230-296 (375)
275 2oyr_A UPF0341 protein YHIQ; a 95.5 0.0033 1.1E-07 50.3 0.9 72 2-81 107-194 (258)
276 1qyr_A KSGA, high level kasuga 95.4 0.0051 1.8E-07 49.0 1.7 48 5-59 41-99 (252)
277 3ll7_A Putative methyltransfer 95.0 0.005 1.7E-07 52.6 0.5 70 1-77 111-199 (410)
278 2qy6_A UPF0209 protein YFCK; s 95.0 0.024 8.2E-07 45.2 4.4 38 50-88 173-214 (257)
279 1m6y_A S-adenosyl-methyltransf 94.8 0.0069 2.4E-07 49.5 0.9 52 5-58 50-106 (301)
280 4gqb_A Protein arginine N-meth 94.6 0.049 1.7E-06 49.0 5.9 68 7-84 387-464 (637)
281 3gcz_A Polyprotein; flavivirus 94.3 0.013 4.3E-07 47.3 1.2 76 6-89 115-203 (282)
282 3uzu_A Ribosomal RNA small sub 94.0 0.018 6.2E-07 46.5 1.6 27 8-34 71-99 (279)
283 3ua3_A Protein arginine N-meth 93.9 0.032 1.1E-06 50.7 3.2 71 6-84 447-531 (745)
284 1pqw_A Polyketide synthase; ro 93.6 0.13 4.3E-06 38.7 5.7 77 4-88 62-138 (198)
285 3ftd_A Dimethyladenosine trans 93.4 0.081 2.8E-06 41.8 4.4 40 2-48 50-92 (249)
286 3khk_A Type I restriction-modi 93.1 0.12 4.1E-06 45.7 5.4 75 6-87 284-395 (544)
287 2dph_A Formaldehyde dismutase; 92.4 0.23 8E-06 41.7 6.2 79 7-88 212-300 (398)
288 2zig_A TTHA0409, putative modi 92.2 0.099 3.4E-06 42.3 3.5 54 26-87 21-97 (297)
289 1kol_A Formaldehyde dehydrogen 91.8 0.31 1E-05 40.9 6.3 79 7-88 212-301 (398)
290 2wk1_A NOVP; transferase, O-me 91.7 0.096 3.3E-06 42.3 2.8 57 25-89 189-246 (282)
291 4dvj_A Putative zinc-dependent 91.7 0.67 2.3E-05 38.4 8.1 73 5-86 197-269 (363)
292 3qwb_A Probable quinone oxidor 91.1 0.38 1.3E-05 39.2 5.9 77 4-88 172-248 (334)
293 1boo_A Protein (N-4 cytosine-s 90.5 0.15 5.2E-06 41.8 3.0 56 26-88 14-85 (323)
294 3eld_A Methyltransferase; flav 90.3 0.17 5.9E-06 41.0 3.0 76 6-89 106-193 (300)
295 2vz8_A Fatty acid synthase; tr 90.1 0.11 3.8E-06 53.8 2.2 75 5-87 1269-1348(2512)
296 3lkd_A Type I restriction-modi 89.8 1.3 4.3E-05 39.1 8.4 78 5-88 248-359 (542)
297 4fzv_A Putative methyltransfer 89.5 0.37 1.3E-05 40.3 4.6 81 6-94 173-292 (359)
298 1f8f_A Benzyl alcohol dehydrog 89.4 0.57 2E-05 38.8 5.7 75 7-89 217-291 (371)
299 3uog_A Alcohol dehydrogenase; 89.1 0.49 1.7E-05 39.2 5.0 78 4-89 212-289 (363)
300 1v3u_A Leukotriene B4 12- hydr 88.9 0.6 2E-05 38.0 5.4 75 4-88 169-245 (333)
301 3s2e_A Zinc-containing alcohol 88.8 0.76 2.6E-05 37.5 6.0 76 5-89 190-265 (340)
302 4b7c_A Probable oxidoreductase 88.8 0.64 2.2E-05 37.8 5.5 76 4-88 173-249 (336)
303 3s1s_A Restriction endonucleas 88.7 1.1 3.6E-05 41.6 7.2 76 6-89 349-467 (878)
304 1wg8_A Predicted S-adenosylmet 88.6 0.45 1.5E-05 38.4 4.2 51 5-57 44-96 (285)
305 3jyn_A Quinone oxidoreductase; 88.6 0.65 2.2E-05 37.7 5.4 78 4-89 164-241 (325)
306 4dup_A Quinone oxidoreductase; 88.4 0.38 1.3E-05 39.6 3.9 76 4-88 191-266 (353)
307 1qor_A Quinone oxidoreductase; 88.3 0.5 1.7E-05 38.4 4.5 77 4-88 164-240 (327)
308 1yb5_A Quinone oxidoreductase; 88.2 0.73 2.5E-05 38.0 5.5 77 4-88 194-270 (351)
309 2dq4_A L-threonine 3-dehydroge 88.1 0.61 2.1E-05 38.2 5.0 73 7-88 191-263 (343)
310 2c0c_A Zinc binding alcohol de 87.9 0.97 3.3E-05 37.3 6.1 76 4-88 187-262 (362)
311 3fpc_A NADP-dependent alcohol 87.7 0.61 2.1E-05 38.3 4.7 76 7-89 193-268 (352)
312 1vj0_A Alcohol dehydrogenase, 87.2 0.45 1.6E-05 39.6 3.7 77 6-89 221-300 (380)
313 2j8z_A Quinone oxidoreductase; 86.7 0.88 3E-05 37.4 5.1 77 4-88 186-262 (354)
314 2d8a_A PH0655, probable L-thre 86.6 1.1 3.7E-05 36.7 5.7 75 7-88 194-268 (348)
315 3fbg_A Putative arginate lyase 86.6 1.3 4.5E-05 36.2 6.1 74 5-87 175-248 (346)
316 3gms_A Putative NADPH:quinone 86.0 0.96 3.3E-05 36.9 5.0 78 4-89 168-245 (340)
317 1rjw_A ADH-HT, alcohol dehydro 85.7 1.4 4.9E-05 35.9 5.9 76 4-89 187-263 (339)
318 4ej6_A Putative zinc-binding d 84.8 2.3 8E-05 35.1 6.9 77 7-89 209-286 (370)
319 4eye_A Probable oxidoreductase 84.6 1 3.4E-05 36.9 4.5 76 4-88 183-258 (342)
320 3jv7_A ADH-A; dehydrogenase, n 84.3 1.2 4.1E-05 36.3 4.8 77 5-89 196-272 (345)
321 2zb4_A Prostaglandin reductase 83.7 2 6.7E-05 35.2 5.9 75 4-88 184-261 (357)
322 1wly_A CAAR, 2-haloacrylate re 83.7 0.9 3.1E-05 36.9 3.8 78 4-89 169-246 (333)
323 2j3h_A NADP-dependent oxidored 83.6 2.1 7.3E-05 34.8 6.1 75 4-88 179-256 (345)
324 2b5w_A Glucose dehydrogenase; 83.4 2.2 7.7E-05 35.0 6.1 72 7-89 201-275 (357)
325 3uko_A Alcohol dehydrogenase c 83.2 1.9 6.6E-05 35.7 5.7 75 7-89 220-297 (378)
326 1pl8_A Human sorbitol dehydrog 83.2 1.3 4.6E-05 36.3 4.7 74 7-88 198-274 (356)
327 3nx4_A Putative oxidoreductase 83.2 2.1 7.3E-05 34.4 5.8 72 5-89 171-243 (324)
328 1e3j_A NADP(H)-dependent ketos 83.1 2.8 9.6E-05 34.3 6.6 77 5-88 192-272 (352)
329 4eez_A Alcohol dehydrogenase 1 83.0 3.4 0.00012 33.5 7.1 78 5-89 188-265 (348)
330 2eih_A Alcohol dehydrogenase; 82.5 1.2 4.1E-05 36.3 4.1 77 4-88 190-266 (343)
331 3two_A Mannitol dehydrogenase; 82.0 1.4 4.9E-05 36.0 4.4 68 5-89 200-267 (348)
332 2hcy_A Alcohol dehydrogenase 1 81.4 1.1 3.8E-05 36.6 3.5 77 4-89 193-271 (347)
333 3pi7_A NADH oxidoreductase; gr 81.3 1.2 4E-05 36.6 3.6 76 5-88 189-264 (349)
334 3r24_A NSP16, 2'-O-methyl tran 81.3 1.9 6.4E-05 35.2 4.6 84 5-104 138-233 (344)
335 3ip1_A Alcohol dehydrogenase, 81.3 3.8 0.00013 34.2 6.9 77 7-89 240-320 (404)
336 1jvb_A NAD(H)-dependent alcoho 80.9 0.98 3.4E-05 37.0 3.0 77 5-88 196-272 (347)
337 1eg2_A Modification methylase 79.2 1.1 3.8E-05 36.6 2.7 42 46-88 54-107 (319)
338 1p0f_A NADP-dependent alcohol 77.7 3.9 0.00013 33.7 5.8 74 7-88 218-294 (373)
339 2h6e_A ADH-4, D-arabinose 1-de 77.6 1.9 6.5E-05 35.1 3.8 74 5-88 196-270 (344)
340 2jhf_A Alcohol dehydrogenase E 77.6 4.4 0.00015 33.4 6.0 74 7-88 218-294 (374)
341 1cdo_A Alcohol dehydrogenase; 77.4 3 0.0001 34.4 5.0 75 7-89 219-296 (374)
342 2hwk_A Helicase NSP2; rossman 77.4 1.9 6.5E-05 34.8 3.5 43 48-91 204-258 (320)
343 1uuf_A YAHK, zinc-type alcohol 76.4 1.8 6.3E-05 35.8 3.4 73 5-89 218-290 (369)
344 1e3i_A Alcohol dehydrogenase, 76.0 3.5 0.00012 34.0 5.0 74 7-88 222-298 (376)
345 2km1_A Protein DRE2; yeast, an 75.6 2.1 7E-05 30.5 2.9 40 45-85 54-96 (136)
346 3tka_A Ribosomal RNA small sub 75.4 4.4 0.00015 33.5 5.3 55 5-60 82-138 (347)
347 4a2c_A Galactitol-1-phosphate 75.3 7.6 0.00026 31.4 6.8 77 6-89 186-262 (346)
348 2fzw_A Alcohol dehydrogenase c 74.7 4 0.00014 33.6 5.0 75 7-89 217-294 (373)
349 1g60_A Adenine-specific methyl 72.9 2 6.7E-05 33.8 2.6 22 65-87 53-74 (260)
350 1xa0_A Putative NADPH dependen 72.1 6.4 0.00022 31.6 5.6 75 4-88 173-247 (328)
351 3goh_A Alcohol dehydrogenase, 71.6 2.2 7.5E-05 34.3 2.6 64 5-87 166-229 (315)
352 3m6i_A L-arabinitol 4-dehydrog 70.5 6.1 0.00021 32.3 5.2 76 7-89 206-285 (363)
353 3krt_A Crotonyl COA reductase; 68.6 12 0.00042 31.7 6.8 77 4-88 252-345 (456)
354 1iz0_A Quinone oxidoreductase; 66.6 4 0.00014 32.5 3.2 70 4-88 149-219 (302)
355 3fwz_A Inner membrane protein 66.6 13 0.00046 25.6 5.7 80 3-89 28-107 (140)
356 3gaz_A Alcohol dehydrogenase s 65.5 7.6 0.00026 31.5 4.7 74 4-88 174-247 (343)
357 3trk_A Nonstructural polyprote 63.7 2.7 9.2E-05 33.6 1.5 42 49-91 210-263 (324)
358 1wg8_A Predicted S-adenosylmet 63.7 4 0.00014 32.8 2.6 33 56-89 197-235 (285)
359 1tt7_A YHFP; alcohol dehydroge 62.9 10 0.00036 30.4 5.1 75 5-89 175-249 (330)
360 2px2_A Genome polyprotein [con 62.7 5.9 0.0002 31.5 3.3 43 46-89 135-185 (269)
361 2oo3_A Protein involved in cat 62.4 21 0.0007 28.6 6.5 80 4-87 112-198 (283)
362 3tka_A Ribosomal RNA small sub 61.1 4.5 0.00015 33.4 2.5 33 56-89 238-276 (347)
363 1piw_A Hypothetical zinc-type 60.7 2.5 8.5E-05 34.7 0.9 74 5-88 203-277 (360)
364 3tos_A CALS11; methyltransfera 60.3 3.5 0.00012 32.6 1.7 71 25-104 158-233 (257)
365 3vyw_A MNMC2; tRNA wobble urid 59.5 5.1 0.00017 32.6 2.5 41 46-88 182-227 (308)
366 3ggo_A Prephenate dehydrogenas 58.7 23 0.0008 28.4 6.4 67 7-85 60-126 (314)
367 4a0s_A Octenoyl-COA reductase/ 58.1 23 0.00078 29.8 6.5 77 4-89 244-338 (447)
368 2cdc_A Glucose dehydrogenase g 57.8 8.1 0.00028 31.6 3.6 73 5-89 204-280 (366)
369 1lss_A TRK system potassium up 56.9 20 0.00067 24.2 5.0 78 3-87 25-102 (140)
370 3gqv_A Enoyl reductase; medium 55.6 34 0.0012 27.9 7.0 74 5-87 189-263 (371)
371 4gua_A Non-structural polyprot 55.3 7.7 0.00026 34.3 3.0 42 47-89 218-271 (670)
372 2vn8_A Reticulon-4-interacting 54.2 17 0.00058 29.8 5.0 74 5-88 208-281 (375)
373 2g5c_A Prephenate dehydrogenas 50.9 30 0.001 26.8 5.8 70 7-88 28-97 (281)
374 3tqh_A Quinone oxidoreductase; 50.9 21 0.00072 28.5 4.9 68 5-87 177-245 (321)
375 1yqd_A Sinapyl alcohol dehydro 49.5 12 0.0004 30.7 3.2 73 5-89 211-284 (366)
376 1m6y_A S-adenosyl-methyltransf 48.8 6.4 0.00022 31.7 1.5 23 66-89 225-247 (301)
377 2cf5_A Atccad5, CAD, cinnamyl 48.6 7.3 0.00025 31.8 1.8 73 5-89 204-277 (357)
378 3llv_A Exopolyphosphatase-rela 46.7 18 0.00061 24.8 3.4 54 2-59 26-79 (141)
379 3c85_A Putative glutathione-re 46.6 35 0.0012 24.4 5.3 78 5-88 63-140 (183)
380 3gg2_A Sugar dehydrogenase, UD 45.6 19 0.00064 30.7 4.0 23 1-23 21-43 (450)
381 2k4m_A TR8_protein, UPF0146 pr 44.7 4.3 0.00015 29.4 -0.2 64 4-89 58-123 (153)
382 3l9w_A Glutathione-regulated p 44.3 37 0.0013 28.5 5.6 80 3-89 25-104 (413)
383 4a7p_A UDP-glucose dehydrogena 44.1 17 0.00058 31.0 3.5 23 1-23 27-49 (446)
384 3ijw_A Aminoglycoside N3-acety 43.5 24 0.00083 27.9 4.0 51 37-88 20-73 (268)
385 3ojo_A CAP5O; rossmann fold, c 42.9 62 0.0021 27.4 6.7 89 1-93 30-135 (431)
386 2f1k_A Prephenate dehydrogenas 42.2 40 0.0014 26.0 5.2 66 4-84 22-88 (279)
387 2nyg_A YOKD protein; PFAM02522 40.7 23 0.00079 28.1 3.5 49 37-86 18-69 (273)
388 3lkz_A Non-structural protein 40.6 14 0.0005 29.9 2.3 90 6-105 119-224 (321)
389 1mv8_A GMD, GDP-mannose 6-dehy 39.9 28 0.00097 29.3 4.2 22 2-23 20-41 (436)
390 4a27_A Synaptic vesicle membra 38.2 28 0.00096 28.1 3.8 72 5-88 168-239 (349)
391 4e12_A Diketoreductase; oxidor 37.8 14 0.00048 29.1 1.9 71 2-84 24-118 (283)
392 2aef_A Calcium-gated potassium 37.2 76 0.0026 23.7 6.0 76 3-87 30-105 (234)
393 3sma_A FRBF; N-acetyl transfer 35.3 31 0.0011 27.6 3.5 51 37-88 27-80 (286)
394 2g1u_A Hypothetical protein TM 34.8 48 0.0017 23.0 4.2 78 3-86 40-117 (155)
395 3pid_A UDP-glucose 6-dehydroge 34.0 59 0.002 27.6 5.2 21 2-23 56-76 (432)
396 3ufb_A Type I restriction-modi 33.6 1.2E+02 0.004 26.3 7.2 75 6-87 255-362 (530)
397 3ce6_A Adenosylhomocysteinase; 31.6 49 0.0017 28.6 4.4 67 5-90 297-364 (494)
398 3l4b_C TRKA K+ channel protien 30.3 60 0.0021 24.0 4.3 79 2-86 20-98 (218)
399 3d1l_A Putative NADP oxidoredu 30.0 58 0.002 24.9 4.3 68 8-89 37-104 (266)
400 1zcj_A Peroxisomal bifunctiona 29.7 1.1E+02 0.0038 25.9 6.3 71 2-85 57-148 (463)
401 3h2s_A Putative NADH-flavin re 29.4 1.1E+02 0.0037 22.2 5.6 78 2-86 21-103 (224)
402 3ius_A Uncharacterized conserv 28.6 1.9E+02 0.0065 21.8 7.4 50 2-61 25-74 (286)
403 3g7u_A Cytosine-specific methy 26.9 71 0.0024 26.4 4.5 82 5-89 24-120 (376)
404 2dpo_A L-gulonate 3-dehydrogen 26.6 38 0.0013 27.3 2.7 71 2-84 26-120 (319)
405 3p8z_A Mtase, non-structural p 26.5 22 0.00075 28.0 1.1 88 6-104 103-205 (267)
406 4e21_A 6-phosphogluconate dehy 24.3 37 0.0013 27.9 2.2 76 2-89 42-117 (358)
407 3c24_A Putative oxidoreductase 23.3 99 0.0034 23.9 4.6 66 3-84 33-98 (286)
408 2ew2_A 2-dehydropantoate 2-red 23.3 1.5E+02 0.0051 22.8 5.7 80 2-87 23-108 (316)
409 1pjc_A Protein (L-alanine dehy 22.0 10 0.00035 31.2 -1.7 78 4-89 189-269 (361)
410 3iup_A Putative NADPH:quinone 21.8 42 0.0014 27.5 2.1 21 5-25 196-216 (379)
411 3d4o_A Dipicolinate synthase s 21.5 1E+02 0.0035 24.1 4.3 69 5-89 178-246 (293)
412 3qha_A Putative oxidoreductase 21.3 29 0.001 27.4 1.0 75 2-91 35-109 (296)
413 2hmt_A YUAA protein; RCK, KTN, 21.2 1.5E+02 0.0051 19.5 4.7 78 3-87 27-104 (144)
414 3b1f_A Putative prephenate deh 21.1 1.1E+02 0.0039 23.5 4.5 67 5-84 31-98 (290)
415 1g55_A DNA cytosine methyltran 21.0 22 0.00076 29.0 0.2 66 5-77 26-106 (343)
416 3g79_A NDP-N-acetyl-D-galactos 20.9 2.2E+02 0.0076 24.3 6.5 45 51-96 102-156 (478)
417 2z30_B TK-subtilisin; thermoco 20.5 90 0.0031 18.5 2.9 28 7-34 33-60 (65)
No 1
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=100.00 E-value=2.4e-36 Score=245.57 Aligned_cols=196 Identities=25% Similarity=0.497 Sum_probs=175.0
Q ss_pred CcccCCeEEEEeCCHHHHHHhhcCCCceEEecCCCCcchhhccCCCCCCceeeeeechhhccCChhHHHHHHHHHhcCCC
Q 035840 1 LAKIYKNVIATDTSPKQLEFAIKLPNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWFDLPQFYKQVKWVLKKPN 80 (213)
Q Consensus 1 la~~~~~V~gvD~S~~ml~~Ar~~~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~d~~~~~~e~~rvLk~pg 80 (213)
|++++.+|+|+|+|+.|++.|++.+++++.++++ +++|+++++||+|++++++||+|++++++|++|+|| ||
T Consensus 57 l~~~~~~v~gvD~s~~ml~~a~~~~~v~~~~~~~-------e~~~~~~~sfD~v~~~~~~h~~~~~~~~~e~~rvLk-pg 128 (257)
T 4hg2_A 57 LAEFFERVHAVDPGEAQIRQALRHPRVTYAVAPA-------EDTGLPPASVDVAIAAQAMHWFDLDRFWAELRRVAR-PG 128 (257)
T ss_dssp HHTTCSEEEEEESCHHHHHTCCCCTTEEEEECCT-------TCCCCCSSCEEEEEECSCCTTCCHHHHHHHHHHHEE-EE
T ss_pred HHHhCCEEEEEeCcHHhhhhhhhcCCceeehhhh-------hhhcccCCcccEEEEeeehhHhhHHHHHHHHHHHcC-CC
Confidence 4678899999999999999999999999999998 889999999999999999999999999999999999 99
Q ss_pred eEEEEEeCCCCCcChHHHHhccccccccccccccchhHHHHcccccCCCCCCCCCCCCCCCCCcceeEEEeeCHHHHHHH
Q 035840 81 GVIAAWTYTMPEINESVGAVFKPFDTVDCEPFWEPQRKLVDNKYMSIDFPFEPVDGVDNTGPFDQFVLEKVMDLDNYFTF 160 (213)
Q Consensus 81 G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~i~~~~~~~~~~~~~~~~~~t~~~~~~~ 160 (213)
|.|++++++.+...+.++.+++.++.+.++++|.+++.++...|+++.+||.++.. ..+.+++.+|+++++++
T Consensus 129 G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~l~~pf~~~~~-------~~~~~~~~~tl~~~~~~ 201 (257)
T 4hg2_A 129 AVFAAVTYGLTRVDPEVDAVVDRLYHGLLARDWPPERVHVESGYRTLPFPFPELEA-------PPLEIEERWPMDAFLGY 201 (257)
T ss_dssp EEEEEEEECCCBCCHHHHHHHHHHHHTTTGGGCCSCCHHHHTTTTTSCCCSCEECC-------CCCEEEEEECHHHHHHH
T ss_pred CEEEEEECCCCCCCHHHHHHHHHHHhcccccccchhhhHHHhhhhhCCCCCcccee-------eEEEEEEEecHHHHHHH
Confidence 99999999888888888888888877678899998888888999999999988752 26788999999999999
Q ss_pred HhhhhHHHHHHHhCCchhhHHHHHHHHHHhCCCCCCcEEEEEeEEEEEeeeC
Q 035840 161 IRSCSGYQTAKDKGVELLTDNVMDKFKVAWNEDGQSQKVARFPIYLRIGQVG 212 (213)
Q Consensus 161 l~s~s~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (213)
++|+|+++++.++..+.+..++.++|++.|+..+ ..+.+.||+++.+||.+
T Consensus 202 l~T~S~~~~~~~~~~~d~l~~~~~~l~~~~g~~~-~~~~v~~pi~l~~Grv~ 252 (257)
T 4hg2_A 202 LGTWSAVTAHRRRTGADPLAEIAPALRAAWGTPE-RPLRVTWPIAIRAGRIL 252 (257)
T ss_dssp HTTSHHHHHHHHHHSSCHHHHHHHHHHHHHSSTT-SCEEEEEEEEEEEEESS
T ss_pred HHHHHHHHHHHHHcCccHHHHHHHHHHHhcCCCC-cEEEEEEEEEEEEEEEC
Confidence 9999999999876444444459999999998765 47899999999999875
No 2
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.93 E-value=1.2e-25 Score=185.75 Aligned_cols=199 Identities=19% Similarity=0.392 Sum_probs=155.7
Q ss_pred ccCCeEEEEeCCHHHHHHhhc--------CCCceEEecCCCCcchhhccCCCCC------CceeeeeechhhccCChhHH
Q 035840 3 KIYKNVIATDTSPKQLEFAIK--------LPNIRYQLTPPTMSITELEQNVATQ------SSVDLVTIAAALHWFDLPQF 68 (213)
Q Consensus 3 ~~~~~V~gvD~S~~ml~~Ar~--------~~~v~~~~~~~~~~~~d~~~~~~~~------~sfDlV~~~~~~hw~d~~~~ 68 (213)
..+.+|+|+|+|+.|++.|++ .++++|.++++ +++++++ ++||+|+++.++||+|+..+
T Consensus 59 ~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~-------~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~ 131 (299)
T 3g5t_A 59 KPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSS-------DDFKFLGADSVDKQKIDMITAVECAHWFDFEKF 131 (299)
T ss_dssp SCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCT-------TCCGGGCTTTTTSSCEEEEEEESCGGGSCHHHH
T ss_pred CCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCH-------HhCCccccccccCCCeeEEeHhhHHHHhCHHHH
Confidence 457899999999999999987 35889999888 6666666 89999999999999999999
Q ss_pred HHHHHHHhcCCCeEEEEEeCCCCCc--ChHHHHhccccccc--ccccccc-chhHHHHcccccCCCC---CCCCCCC---
Q 035840 69 YKQVKWVLKKPNGVIAAWTYTMPEI--NESVGAVFKPFDTV--DCEPFWE-PQRKLVDNKYMSIDFP---FEPVDGV--- 137 (213)
Q Consensus 69 ~~e~~rvLk~pgG~l~~~~~~~~~~--~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~---f~~i~~~--- 137 (213)
++++.|+|| |||.|+++++..+.+ .+.+..++..+..+ .++++|. +++..+.+.+.+++|| |.++...
T Consensus 132 l~~~~~~Lk-pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~p~~~~~~~~l~~~gfp~~~f~~v~~~~~~ 210 (299)
T 3g5t_A 132 QRSAYANLR-KDGTIAIWGYADPIFPDYPEFDDLMIEVPYGKQGLGPYWEQPGRSRLRNMLKDSHLDPELFHDIQVSYFC 210 (299)
T ss_dssp HHHHHHHEE-EEEEEEEEEEEEEECTTCGGGTTHHHHHHHCTTTTGGGSCTTHHHHHHTTTTTCCCCTTTEEEEEEEEEC
T ss_pred HHHHHHhcC-CCcEEEEEecCCccccCcHHHHHHHHHhccCcccccchhhchhhHHHHHhhhccCCChHHcCcceEEEec
Confidence 999999999 999999988776543 24555666665543 4778997 8888888899999988 3555210
Q ss_pred -----------CCCCCCcceeEEEeeCHHHHHHHHhhhhHHHHHHH--hCCc--hhhHHHHHH-HHHHhCCCCCCcEEEE
Q 035840 138 -----------DNTGPFDQFVLEKVMDLDNYFTFIRSCSGYQTAKD--KGVE--LLTDNVMDK-FKVAWNEDGQSQKVAR 201 (213)
Q Consensus 138 -----------~~~~~~~~~~~~~~~t~~~~~~~l~s~s~~~~~~~--~~~~--~~~~~~~~~-l~~~~~~~~~~~~~~~ 201 (213)
+.. . ..+.....++++++.++++|||+++++.+ +.++ .+.++++++ |++..+-.....+++.
T Consensus 211 ~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~l~t~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 288 (299)
T 3g5t_A 211 AEDVRDKVKLHQHT-K-KPLLIRKQVTLVEFADYVRTWSAYHQWKQDPKNKDKEDVADWFIKESLRRRPELSTNTKIEVV 288 (299)
T ss_dssp GGGGGCHHHHHHCS-S-CCCCCEEEECHHHHHHHHTTSHHHHHHHHCGGGTTSCCHHHHHHHHHHHHCTTCCTTCCEEEE
T ss_pred ccccccccccccCC-C-CceeeeccccHHHHHHHHHHhHHHHHHHhcccCCchhhHHHHHHHHHHHhccCCCCCCEEEEE
Confidence 001 1 14566889999999999999999999988 5443 444448888 7774444322478999
Q ss_pred EeEEEEEeee
Q 035840 202 FPIYLRIGQV 211 (213)
Q Consensus 202 ~~~~~~~~~~ 211 (213)
|++++++|||
T Consensus 289 w~~~~~~~rk 298 (299)
T 3g5t_A 289 WNTFYKLGKR 298 (299)
T ss_dssp EEEEEEEEEE
T ss_pred ecceeeeEec
Confidence 9999999998
No 3
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.79 E-value=3.2e-19 Score=143.69 Aligned_cols=192 Identities=14% Similarity=0.074 Sum_probs=125.6
Q ss_pred cccCCeEEEEeCCHHHHHHhhcC-----CCceEEecCCCCcchhhccCCCCCCceeeeeechhhccC-ChhHHHHHHHHH
Q 035840 2 AKIYKNVIATDTSPKQLEFAIKL-----PNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWF-DLPQFYKQVKWV 75 (213)
Q Consensus 2 a~~~~~V~gvD~S~~ml~~Ar~~-----~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~-d~~~~~~e~~rv 75 (213)
++...+|+|+|+|+.|++.|++. +++++..+++ +++++++++||+|++..++||+ |+..+++++.|+
T Consensus 58 ~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~-------~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~ 130 (263)
T 2yqz_A 58 IARGYRYIALDADAAMLEVFRQKIAGVDRKVQVVQADA-------RAIPLPDESVHGVIVVHLWHLVPDWPKVLAEAIRV 130 (263)
T ss_dssp HTTTCEEEEEESCHHHHHHHHHHTTTSCTTEEEEESCT-------TSCCSCTTCEEEEEEESCGGGCTTHHHHHHHHHHH
T ss_pred HHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEccc-------ccCCCCCCCeeEEEECCchhhcCCHHHHHHHHHHH
Confidence 45577999999999999999874 6789999888 7788889999999999999999 999999999999
Q ss_pred hcCCCeEEEEEeCCCC--C----cChHHHHhccccccccccccccchhHHHHcccccCCCCCCCCCCCCCCCCCcceeEE
Q 035840 76 LKKPNGVIAAWTYTMP--E----INESVGAVFKPFDTVDCEPFWEPQRKLVDNKYMSIDFPFEPVDGVDNTGPFDQFVLE 149 (213)
Q Consensus 76 Lk~pgG~l~~~~~~~~--~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~i~~~~~~~~~~~~~~~ 149 (213)
|| |||.+++. +..+ . +...+..++..+...............+.+.+...+ |..+.. ....+.
T Consensus 131 L~-pgG~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G--f~~~~~-------~~~~~~ 199 (263)
T 2yqz_A 131 LK-PGGALLEG-WDQAEASPEWTLQERWRAFAAEEGFPVERGLHAKRLKEVEEALRRLG--LKPRTR-------EVARWR 199 (263)
T ss_dssp EE-EEEEEEEE-EEEECCCHHHHHHHHHHHHHHHHTCCCCCCHHHHHHHHHHHHHHHTT--CCCEEE-------EEEEEE
T ss_pred CC-CCcEEEEE-ecCCCccHHHHHHHHHHHHHHHhCCCcccccccCCHHHHHHHHHHcC--CCcceE-------EEeeee
Confidence 99 99999876 3322 1 112233333322110000000011112223344444 332210 134566
Q ss_pred EeeCHHHHHHHHhhh--hHHHHHHHhCCchhhHHHHHHHHHHhCCCCCCcEEEEEeEEEEEeeeC
Q 035840 150 KVMDLDNYFTFIRSC--SGYQTAKDKGVELLTDNVMDKFKVAWNEDGQSQKVARFPIYLRIGQVG 212 (213)
Q Consensus 150 ~~~t~~~~~~~l~s~--s~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (213)
...+.+++.+++.+. +....+.++..+.+.+++++.+.+.++... ...+.++.+++.+||||
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~rkp 263 (263)
T 2yqz_A 200 EERTPREALEALSERLYSFTQGLPEPVHARVMERLWAWAEAELGDLD-RPFPVEKRFLLRVSRLG 263 (263)
T ss_dssp EEECHHHHHHHHHTTCSGGGSSSCHHHHHHHHHHHHHHHHHHSSCTT-SCEEEEEEEEEEEEECC
T ss_pred cCCCHHHHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHhcCCcC-ccccccceeEEEeeecC
Confidence 677999999998753 332223223333444446667777776543 36899999999999997
No 4
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.73 E-value=1.2e-17 Score=136.20 Aligned_cols=191 Identities=14% Similarity=0.128 Sum_probs=115.0
Q ss_pred ccCCeEEEEeCCHHHHHHhhcC-CCceEEecCCCCcchhhccCCCCCCceeeeeechhhccC-ChhHHHHHHHHHhcCCC
Q 035840 3 KIYKNVIATDTSPKQLEFAIKL-PNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWF-DLPQFYKQVKWVLKKPN 80 (213)
Q Consensus 3 ~~~~~V~gvD~S~~ml~~Ar~~-~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~-d~~~~~~e~~rvLk~pg 80 (213)
+...+|+|+|+|+.|++.|++. +++++..+++ +++++ +++||+|++..++||+ |+..+++++.|+|| ||
T Consensus 77 ~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~-------~~~~~-~~~fD~v~~~~~l~~~~d~~~~l~~~~~~Lk-pg 147 (279)
T 3ccf_A 77 QSGAEVLGTDNAATMIEKARQNYPHLHFDVADA-------RNFRV-DKPLDAVFSNAMLHWVKEPEAAIASIHQALK-SG 147 (279)
T ss_dssp HTTCEEEEEESCHHHHHHHHHHCTTSCEEECCT-------TTCCC-SSCEEEEEEESCGGGCSCHHHHHHHHHHHEE-EE
T ss_pred hCCCeEEEEECCHHHHHHHHhhCCCCEEEECCh-------hhCCc-CCCcCEEEEcchhhhCcCHHHHHHHHHHhcC-CC
Confidence 3567999999999999999974 6889999888 77776 6789999999999998 99999999999999 99
Q ss_pred eEEEEEeCCCCCc---ChHHHHhcccccc---ccccccccchhHHHHcccccCCCCCCCCCCCCCCCCCcceeEEEee--
Q 035840 81 GVIAAWTYTMPEI---NESVGAVFKPFDT---VDCEPFWEPQRKLVDNKYMSIDFPFEPVDGVDNTGPFDQFVLEKVM-- 152 (213)
Q Consensus 81 G~l~~~~~~~~~~---~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~f~~i~~~~~~~~~~~~~~~~~~-- 152 (213)
|.|++........ ...+..++..... ....+........+...+...+ |+.+.. ..+.....+
T Consensus 148 G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG--f~~~~~-------~~~~~~~~~~~ 218 (279)
T 3ccf_A 148 GRFVAEFGGKGNIKYILEALYNALETLGIHNPQALNPWYFPSIGEYVNILEKQG--FDVTYA-------ALFNRPTTLAE 218 (279)
T ss_dssp EEEEEEEECTTTTHHHHHHHHHHHHHHTCCCGGGGCCCCCCCHHHHHHHHHHHT--EEEEEE-------EEEECCEECSS
T ss_pred cEEEEEecCCcchHHHHHHHHHHHHhcCCccccCcCceeCCCHHHHHHHHHHcC--CEEEEE-------EEecccccccC
Confidence 9998766553332 1122222222110 0001111111111222233333 322210 011111222
Q ss_pred CHHHHHHHHhhhhH--HHHHHHhCCchhhHHHHHHHHHHhCCCCCCcEEEEEeEEEEEeeeCC
Q 035840 153 DLDNYFTFIRSCSG--YQTAKDKGVELLTDNVMDKFKVAWNEDGQSQKVARFPIYLRIGQVGN 213 (213)
Q Consensus 153 t~~~~~~~l~s~s~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (213)
+.+.+..++.+++. ...+.++..+.+.+++++.+.+.+...+ .+...|...+++|+||.
T Consensus 219 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--~~~~~~~~~~v~a~Kp~ 279 (279)
T 3ccf_A 219 GEFGMANWIQMFASAFLVGLTPDQQVQLIRKVEATLQDKLYHQE--SWTADYRRIRIVSIKAQ 279 (279)
T ss_dssp GGGHHHHHHHHHCHHHHTTCCHHHHHHHHHHHHHHHHHHHEETT--EEEECCEEEEEEEEEC-
T ss_pred CHHHHHHHHHHhhHHHhccCCHHHHHHHHHHHHHHHHhhccCCC--cEEEEEEEEEEEEecCC
Confidence 35677777776532 2222222223344445555555555443 78899999999999984
No 5
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.70 E-value=1.6e-16 Score=127.69 Aligned_cols=188 Identities=15% Similarity=0.131 Sum_probs=115.9
Q ss_pred CCeEEEEeCCHHHHHHhhc-CCCceEEecCCCCcchhhccCCCCCCceeeeeechhhccC-ChhHHHHHHHHHhcCCCeE
Q 035840 5 YKNVIATDTSPKQLEFAIK-LPNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWF-DLPQFYKQVKWVLKKPNGV 82 (213)
Q Consensus 5 ~~~V~gvD~S~~ml~~Ar~-~~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~-d~~~~~~e~~rvLk~pgG~ 82 (213)
..+|+|+|+|+.|++.|++ .+++++..+++ ++++ ++++||+|++..++||+ |+..+++++.|+|| |||.
T Consensus 57 ~~~v~~~D~s~~~~~~a~~~~~~~~~~~~d~-------~~~~-~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~-pgG~ 127 (259)
T 2p35_A 57 VNVITGIDSDDDMLEKAADRLPNTNFGKADL-------ATWK-PAQKADLLYANAVFQWVPDHLAVLSQLMDQLE-SGGV 127 (259)
T ss_dssp TTSEEEEESCHHHHHHHHHHSTTSEEEECCT-------TTCC-CSSCEEEEEEESCGGGSTTHHHHHHHHGGGEE-EEEE
T ss_pred CCEEEEEECCHHHHHHHHHhCCCcEEEECCh-------hhcC-ccCCcCEEEEeCchhhCCCHHHHHHHHHHhcC-CCeE
Confidence 5789999999999999997 47899999888 7777 78899999999999999 99999999999999 9999
Q ss_pred EEEEeCCCCCc--ChHHHHhccc-----ccccc---ccccccchhHHHHcccccCCCCCCCCCCCCCCCCCcceeEEEee
Q 035840 83 IAAWTYTMPEI--NESVGAVFKP-----FDTVD---CEPFWEPQRKLVDNKYMSIDFPFEPVDGVDNTGPFDQFVLEKVM 152 (213)
Q Consensus 83 l~~~~~~~~~~--~~~~~~~~~~-----~~~~~---~~~~~~~~~~~~~~~~~~~~~~f~~i~~~~~~~~~~~~~~~~~~ 152 (213)
|++...+.... ...+..+... ...+. ..++.. ...+.+.+...+|... +. +........
T Consensus 128 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~aGf~v~-~~--------~~~~~~~~~ 196 (259)
T 2p35_A 128 LAVQMPDNLQEPTHIAMHETADGGPWKDAFSGGGLRRKPLPP--PSDYFNALSPKSSRVD-VW--------HTVYNHPMK 196 (259)
T ss_dssp EEEEEECCTTSHHHHHHHHHHHHSTTGGGC-------CCCCC--HHHHHHHHGGGEEEEE-EE--------EEEEEEEES
T ss_pred EEEEeCCCCCcHHHHHHHHHhcCcchHHHhccccccccCCCC--HHHHHHHHHhcCCceE-EE--------EEEeeeccC
Confidence 98776442211 1122222211 11100 001111 1122233444432111 10 011112224
Q ss_pred CHHHHHHHHhhhhHH---HHHHHhCCchhhHHHHHHHHHHhCCCCCCcEEEEEeEEEEEeeeC
Q 035840 153 DLDNYFTFIRSCSGY---QTAKDKGVELLTDNVMDKFKVAWNEDGQSQKVARFPIYLRIGQVG 212 (213)
Q Consensus 153 t~~~~~~~l~s~s~~---~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (213)
+.+.+..++++.+.. ..+.++..+.+.+++.+.+++.++....+.+.++|.+.+++|+||
T Consensus 197 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~a~Kp 259 (259)
T 2p35_A 197 DADSIVEWVKGTGLRPYLAAAGEENREAFLADYTRRIAAAYPPMADGRLLLRFPRLFVVAVKK 259 (259)
T ss_dssp CHHHHHHHHTTTTTTHHHHTTCGGGHHHHHHHHHHHHHHHSCCCTTSCEEEEEEEEEEEEEEC
T ss_pred CchHHhhhhhcCcchHHHHhCCHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEeeeEEEEEecC
Confidence 788899999876521 112222223333345555555555322236899999999999997
No 6
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.68 E-value=2.3e-16 Score=127.22 Aligned_cols=185 Identities=16% Similarity=0.175 Sum_probs=112.6
Q ss_pred cccCCeEEEEeCCHHHHHHhhcC------CCceEEecCCCCcchhhccCCCCCCceeeeeechhhccC-ChhHHHHHHHH
Q 035840 2 AKIYKNVIATDTSPKQLEFAIKL------PNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWF-DLPQFYKQVKW 74 (213)
Q Consensus 2 a~~~~~V~gvD~S~~ml~~Ar~~------~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~-d~~~~~~e~~r 74 (213)
++.+.+|+|+|+|+.|++.|++. +++++.++++ +++|+++++||+|++..++||+ |+..+++++.|
T Consensus 56 ~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~-------~~l~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r 128 (260)
T 1vl5_A 56 APFVKKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDA-------EQMPFTDERFHIVTCRIAAHHFPNPASFVSEAYR 128 (260)
T ss_dssp GGGSSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC--------CCCSCTTCEEEEEEESCGGGCSCHHHHHHHHHH
T ss_pred HHhCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecH-------HhCCCCCCCEEEEEEhhhhHhcCCHHHHHHHHHH
Confidence 55677999999999999999873 5789999888 7889999999999999999999 99999999999
Q ss_pred HhcCCCeEEEEEeCCCCCcChHHHHhcc---ccccccccccccchhHHHHcccccCCCCCCCCCCCCCCCCCcceeEEEe
Q 035840 75 VLKKPNGVIAAWTYTMPEINESVGAVFK---PFDTVDCEPFWEPQRKLVDNKYMSIDFPFEPVDGVDNTGPFDQFVLEKV 151 (213)
Q Consensus 75 vLk~pgG~l~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~i~~~~~~~~~~~~~~~~~ 151 (213)
+|| |||.|++.....+.. +.+...+. .+......+++.. .. +...+...+ |+.+. .......
T Consensus 129 ~Lk-pgG~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~l~~aG--f~~~~---------~~~~~~~ 193 (260)
T 1vl5_A 129 VLK-KGGQLLLVDNSAPEN-DAFDVFYNYVEKERDYSHHRAWKK-SD-WLKMLEEAG--FELEE---------LHCFHKT 193 (260)
T ss_dssp HEE-EEEEEEEEEEEBCSS-HHHHHHHHHHHHHHCTTCCCCCBH-HH-HHHHHHHHT--CEEEE---------EEEEEEE
T ss_pred HcC-CCCEEEEEEcCCCCC-HHHHHHHHHHHHhcCccccCCCCH-HH-HHHHHHHCC--CeEEE---------EEEeecc
Confidence 999 999998865443321 22222111 1110000111111 11 122233333 32221 1223334
Q ss_pred eCHHHHHHHHhhhhHHHHHHHhCCchhhHHHHHHHHHHhCC-CCCC-cEEEEEeEEEEEeeeC
Q 035840 152 MDLDNYFTFIRSCSGYQTAKDKGVELLTDNVMDKFKVAWNE-DGQS-QKVARFPIYLRIGQVG 212 (213)
Q Consensus 152 ~t~~~~~~~l~s~s~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~-~~~~~~~~~~~~~~~~ 212 (213)
++..++...+.+......... +.+.+ +.+.+++.+.. ...+ .+.+.++..+++|+||
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~---~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~k~ 252 (260)
T 1vl5_A 194 FIFEDWCDRMNVTTEKKQELS---DFIKS-KPTEYYQKFKIVVEDGRVYSFRGESILMKARKP 252 (260)
T ss_dssp EEHHHHHHHTTCCHHHHHHHH---HHHHT-SCHHHHHHTTCEEETTEEEEEEEEEEEEEEECC
T ss_pred CCHHHHHHhcCCCHHHHHHHH---HHHHh-CcHHHHHHcceeccCCCcceEEeeEEEEEEEcc
Confidence 566777666554333222211 11111 33455556654 1111 2688999999999997
No 7
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.65 E-value=1.6e-15 Score=120.92 Aligned_cols=184 Identities=15% Similarity=0.111 Sum_probs=116.2
Q ss_pred cccCCeEEEEeCCHHHHHHhhcC------CCceEEecCCCCcchhhccCCCCCCceeeeeechhhccC-ChhHHHHHHHH
Q 035840 2 AKIYKNVIATDTSPKQLEFAIKL------PNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWF-DLPQFYKQVKW 74 (213)
Q Consensus 2 a~~~~~V~gvD~S~~ml~~Ar~~------~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~-d~~~~~~e~~r 74 (213)
++.+.+|+|+|+|+.|++.|++. +++++..+++ +++++++++||+|++..++||+ |+..++.++.|
T Consensus 40 ~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~-------~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~ 112 (239)
T 1xxl_A 40 SPYVQECIGVDATKEMVEVASSFAQEKGVENVRFQQGTA-------ESLPFPDDSFDIITCRYAAHHFSDVRKAVREVAR 112 (239)
T ss_dssp GGGSSEEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBT-------TBCCSCTTCEEEEEEESCGGGCSCHHHHHHHHHH
T ss_pred HHhCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEeccc-------ccCCCCCCcEEEEEECCchhhccCHHHHHHHHHH
Confidence 55677999999999999999873 5788988887 7888999999999999999888 99999999999
Q ss_pred HhcCCCeEEEEEeCCCCCcChHHHHhcccc---ccccccccccchhHHHHcccccCCCCCCCCCCCCCCCCCcceeEEEe
Q 035840 75 VLKKPNGVIAAWTYTMPEINESVGAVFKPF---DTVDCEPFWEPQRKLVDNKYMSIDFPFEPVDGVDNTGPFDQFVLEKV 151 (213)
Q Consensus 75 vLk~pgG~l~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~f~~i~~~~~~~~~~~~~~~~~ 151 (213)
+|| |||.+++.....+.. +.+...+..+ ....-..+.. ...+...+...+ |..+. ...+...
T Consensus 113 ~Lk-pgG~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ll~~aG--f~~~~---------~~~~~~~ 177 (239)
T 1xxl_A 113 VLK-QDGRFLLVDHYAPED-PVLDEFVNHLNRLRDPSHVRESS--LSEWQAMFSANQ--LAYQD---------IQKWNLP 177 (239)
T ss_dssp HEE-EEEEEEEEEECBCSS-HHHHHHHHHHHHHHCTTCCCCCB--HHHHHHHHHHTT--EEEEE---------EEEEEEE
T ss_pred HcC-CCcEEEEEEcCCCCC-hhHHHHHHHHHHhccccccCCCC--HHHHHHHHHHCC--CcEEE---------EEeecCc
Confidence 999 999998876553322 2222222111 0000001111 111222333333 33221 2334455
Q ss_pred eCHHHHHHHHhhhhHHHHHHHhCCchhhHHHHHHHHHHhCC---CCCCc-EEEEEeEEEEEeeeC
Q 035840 152 MDLDNYFTFIRSCSGYQTAKDKGVELLTDNVMDKFKVAWNE---DGQSQ-KVARFPIYLRIGQVG 212 (213)
Q Consensus 152 ~t~~~~~~~l~s~s~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~~~~-~~~~~~~~~~~~~~~ 212 (213)
++..++.+.+.+.+............ +.+.+++.+.. .+ +. +.++++..++.|.|+
T Consensus 178 ~~~~~w~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~-G~~~~~t~~~~~~~~~k~ 237 (239)
T 1xxl_A 178 IQYDSWIKRGGTPADREKQIITHLNH----ASDEARDTFCITLNQN-GQPISFCLKAILIQGIKR 237 (239)
T ss_dssp EEHHHHHHHHTCCHHHHHHHHHHHHT----CCHHHHHHTTCEECTT-SCEEEEEEEEEEEEEEEC
T ss_pred cCHHHHHHHcCCCHHHHHHHHHHHHh----CCHHHHHHhCeeecCC-CCceeEEeeeeehehhcc
Confidence 67788888877655544333221111 23344455553 22 24 578898888888775
No 8
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.43 E-value=6.3e-14 Score=109.28 Aligned_cols=78 Identities=12% Similarity=-0.015 Sum_probs=64.0
Q ss_pred CcccCCeEEEEeCCHHHHHHhhcC------------------CCceEEecCCCCcchhhccCCCCC-Cceeeeeechhhc
Q 035840 1 LAKIYKNVIATDTSPKQLEFAIKL------------------PNIRYQLTPPTMSITELEQNVATQ-SSVDLVTIAAALH 61 (213)
Q Consensus 1 la~~~~~V~gvD~S~~ml~~Ar~~------------------~~v~~~~~~~~~~~~d~~~~~~~~-~sfDlV~~~~~~h 61 (213)
||++..+|+|+|+|+.|++.|+++ +++++.++++ .++++++ ++||+|++..++|
T Consensus 40 la~~g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~-------~~l~~~~~~~fD~v~~~~~l~ 112 (203)
T 1pjz_A 40 LSGQGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDF-------FALTARDIGHCAAFYDRAAMI 112 (203)
T ss_dssp HHHHCCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECC-------SSSTHHHHHSEEEEEEESCGG
T ss_pred HHHCCCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECcc-------ccCCcccCCCEEEEEECcchh
Confidence 355677999999999999999863 3677888777 7777765 7899999999999
Q ss_pred cCC---hhHHHHHHHHHhcCCCeEEEEE
Q 035840 62 WFD---LPQFYKQVKWVLKKPNGVIAAW 86 (213)
Q Consensus 62 w~d---~~~~~~e~~rvLk~pgG~l~~~ 86 (213)
++. ...++++++|+|| |||.+++.
T Consensus 113 ~l~~~~~~~~l~~~~r~Lk-pgG~~~l~ 139 (203)
T 1pjz_A 113 ALPADMRERYVQHLEALMP-QACSGLLI 139 (203)
T ss_dssp GSCHHHHHHHHHHHHHHSC-SEEEEEEE
T ss_pred hCCHHHHHHHHHHHHHHcC-CCcEEEEE
Confidence 883 4568999999999 99984433
No 9
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.42 E-value=4.1e-13 Score=110.08 Aligned_cols=77 Identities=19% Similarity=0.154 Sum_probs=68.8
Q ss_pred CCeEEEEeCCHHHHHHhhcC-------CCceEEecCCCCcchhhccCCCCCCceeeeeechhhccC-ChhHHHHHHHHHh
Q 035840 5 YKNVIATDTSPKQLEFAIKL-------PNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWF-DLPQFYKQVKWVL 76 (213)
Q Consensus 5 ~~~V~gvD~S~~ml~~Ar~~-------~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~-d~~~~~~e~~rvL 76 (213)
..+|+|+|+|+.|++.|++. +++++..+++ +++|+++++||+|++..++|++ |+..+++++.|+|
T Consensus 105 ~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~-------~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L 177 (297)
T 2o57_A 105 GVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSF-------LEIPCEDNSYDFIWSQDAFLHSPDKLKVFQECARVL 177 (297)
T ss_dssp CCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCT-------TSCSSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHE
T ss_pred CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCc-------ccCCCCCCCEeEEEecchhhhcCCHHHHHHHHHHHc
Confidence 45999999999999999873 4688999888 7888999999999999999988 9999999999999
Q ss_pred cCCCeEEEEEeCC
Q 035840 77 KKPNGVIAAWTYT 89 (213)
Q Consensus 77 k~pgG~l~~~~~~ 89 (213)
| |||.|++....
T Consensus 178 k-pgG~l~~~~~~ 189 (297)
T 2o57_A 178 K-PRGVMAITDPM 189 (297)
T ss_dssp E-EEEEEEEEEEE
T ss_pred C-CCeEEEEEEec
Confidence 9 99999877654
No 10
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.41 E-value=7.6e-13 Score=107.02 Aligned_cols=77 Identities=19% Similarity=0.223 Sum_probs=69.0
Q ss_pred CCeEEEEeCCHHHHHHhhcC-------CCceEEecCCCCcchhhccCCCCCCceeeeeechhhccC-ChhHHHHHHHHHh
Q 035840 5 YKNVIATDTSPKQLEFAIKL-------PNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWF-DLPQFYKQVKWVL 76 (213)
Q Consensus 5 ~~~V~gvD~S~~ml~~Ar~~-------~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~-d~~~~~~e~~rvL 76 (213)
..+|+|+|+|+.|++.|++. +++++..+++ +++|+++++||+|++..++||+ |+..+++++.|+|
T Consensus 84 ~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~-------~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L 156 (273)
T 3bus_A 84 DVRVTGISISRPQVNQANARATAAGLANRVTFSYADA-------MDLPFEDASFDAVWALESLHHMPDRGRALREMARVL 156 (273)
T ss_dssp CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCT-------TSCCSCTTCEEEEEEESCTTTSSCHHHHHHHHHTTE
T ss_pred CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECcc-------ccCCCCCCCccEEEEechhhhCCCHHHHHHHHHHHc
Confidence 56999999999999999873 3588999887 7788999999999999999999 9999999999999
Q ss_pred cCCCeEEEEEeCC
Q 035840 77 KKPNGVIAAWTYT 89 (213)
Q Consensus 77 k~pgG~l~~~~~~ 89 (213)
| |||.+++....
T Consensus 157 ~-pgG~l~i~~~~ 168 (273)
T 3bus_A 157 R-PGGTVAIADFV 168 (273)
T ss_dssp E-EEEEEEEEEEE
T ss_pred C-CCeEEEEEEee
Confidence 9 99999877654
No 11
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.38 E-value=4.4e-12 Score=102.73 Aligned_cols=77 Identities=25% Similarity=0.251 Sum_probs=68.9
Q ss_pred CCeEEEEeCCHHHHHHhhcC------CCceEEecCCCCcchhhccCCCCCCceeeeeechhhccC-ChhHHHHHHHHHhc
Q 035840 5 YKNVIATDTSPKQLEFAIKL------PNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWF-DLPQFYKQVKWVLK 77 (213)
Q Consensus 5 ~~~V~gvD~S~~ml~~Ar~~------~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~-d~~~~~~e~~rvLk 77 (213)
..+|+|+|+|+.|++.|++. +++++..+++ .++++++++||+|++..+++++ |+..+++++.|+||
T Consensus 61 ~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~-------~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~ 133 (276)
T 3mgg_A 61 DAEITSIDISPESLEKARENTEKNGIKNVKFLQANI-------FSLPFEDSSFDHIFVCFVLEHLQSPEEALKSLKKVLK 133 (276)
T ss_dssp TSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCG-------GGCCSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEE
T ss_pred CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEccc-------ccCCCCCCCeeEEEEechhhhcCCHHHHHHHHHHHcC
Confidence 46999999999999999873 5788888887 7888899999999999999999 99999999999999
Q ss_pred CCCeEEEEEeCC
Q 035840 78 KPNGVIAAWTYT 89 (213)
Q Consensus 78 ~pgG~l~~~~~~ 89 (213)
|||.+++....
T Consensus 134 -pgG~l~~~~~~ 144 (276)
T 3mgg_A 134 -PGGTITVIEGD 144 (276)
T ss_dssp -EEEEEEEEEEC
T ss_pred -CCcEEEEEEcC
Confidence 99999876543
No 12
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.37 E-value=1e-12 Score=106.54 Aligned_cols=75 Identities=15% Similarity=0.191 Sum_probs=63.4
Q ss_pred CCeEEEEeCCHHHHHHhhcC-------CCceEEecCCCCcchhhccCCCCCCceeeeeechhhccC---ChhHHHHHHHH
Q 035840 5 YKNVIATDTSPKQLEFAIKL-------PNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWF---DLPQFYKQVKW 74 (213)
Q Consensus 5 ~~~V~gvD~S~~ml~~Ar~~-------~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~---d~~~~~~e~~r 74 (213)
..+|+|+|+|+.||+.||++ .++++.++++ .++|++ .||+|++..++||+ ++..++++++|
T Consensus 96 ~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~-------~~~~~~--~~d~v~~~~~l~~~~~~~~~~~l~~i~~ 166 (261)
T 4gek_A 96 NCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDI-------RDIAIE--NASMVVLNFTLQFLEPSERQALLDKIYQ 166 (261)
T ss_dssp SCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCT-------TTCCCC--SEEEEEEESCGGGSCHHHHHHHHHHHHH
T ss_pred CCEEEEEECCHHHHHHHHHHHHhhccCceEEEeeccc-------cccccc--ccccceeeeeeeecCchhHhHHHHHHHH
Confidence 34899999999999999973 3688888887 777664 49999999999999 34578999999
Q ss_pred HhcCCCeEEEEEeCC
Q 035840 75 VLKKPNGVIAAWTYT 89 (213)
Q Consensus 75 vLk~pgG~l~~~~~~ 89 (213)
+|| |||.|++....
T Consensus 167 ~Lk-pGG~lii~e~~ 180 (261)
T 4gek_A 167 GLN-PGGALVLSEKF 180 (261)
T ss_dssp HEE-EEEEEEEEEEB
T ss_pred HcC-CCcEEEEEecc
Confidence 999 99999887654
No 13
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.35 E-value=1.2e-12 Score=103.84 Aligned_cols=81 Identities=14% Similarity=0.153 Sum_probs=70.1
Q ss_pred cccCCeEEEEeCCHHHHHHhhcC-C-CceEEecCCCCcchhhccCCCCCCceeeeeechhhccC-ChhHHHHHHH-HHhc
Q 035840 2 AKIYKNVIATDTSPKQLEFAIKL-P-NIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWF-DLPQFYKQVK-WVLK 77 (213)
Q Consensus 2 a~~~~~V~gvD~S~~ml~~Ar~~-~-~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~-d~~~~~~e~~-rvLk 77 (213)
++.+.+|+|+|+|+.|++.|++. + ++++.++++ +++ +++++||+|++..++|++ |+..+++++. |+||
T Consensus 61 ~~~~~~v~gvD~s~~~~~~a~~~~~~~v~~~~~d~-------~~~-~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~~Lk 132 (250)
T 2p7i_A 61 QEHFNDITCVEASEEAISHAQGRLKDGITYIHSRF-------EDA-QLPRRYDNIVLTHVLEHIDDPVALLKRINDDWLA 132 (250)
T ss_dssp TTTCSCEEEEESCHHHHHHHHHHSCSCEEEEESCG-------GGC-CCSSCEEEEEEESCGGGCSSHHHHHHHHHHTTEE
T ss_pred HHhCCcEEEEeCCHHHHHHHHHhhhCCeEEEEccH-------HHc-CcCCcccEEEEhhHHHhhcCHHHHHHHHHHHhcC
Confidence 55677999999999999999974 3 788888887 665 578899999999999999 9999999999 9999
Q ss_pred CCCeEEEEEeCCCC
Q 035840 78 KPNGVIAAWTYTMP 91 (213)
Q Consensus 78 ~pgG~l~~~~~~~~ 91 (213)
|||.+++......
T Consensus 133 -pgG~l~i~~~~~~ 145 (250)
T 2p7i_A 133 -EGGRLFLVCPNAN 145 (250)
T ss_dssp -EEEEEEEEEECTT
T ss_pred -CCCEEEEEcCChH
Confidence 9999988765533
No 14
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.35 E-value=1.2e-12 Score=101.40 Aligned_cols=81 Identities=10% Similarity=0.140 Sum_probs=71.2
Q ss_pred cccCCeEEEEeCCHHHHHHhhc-CCCceEEecCCCCcchhhccCCCCCCceeeeeechhhccC---ChhHHHHHHHHHhc
Q 035840 2 AKIYKNVIATDTSPKQLEFAIK-LPNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWF---DLPQFYKQVKWVLK 77 (213)
Q Consensus 2 a~~~~~V~gvD~S~~ml~~Ar~-~~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~---d~~~~~~e~~rvLk 77 (213)
+....+|+|+|+|+.|++.|++ .+++++..+++ +++++++++||+|++..++|++ ++..+++++.|+||
T Consensus 60 ~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~-------~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~ 132 (203)
T 3h2b_A 60 ASLGHQIEGLEPATRLVELARQTHPSVTFHHGTI-------TDLSDSPKRWAGLLAWYSLIHMGPGELPDALVALRMAVE 132 (203)
T ss_dssp HHTTCCEEEECCCHHHHHHHHHHCTTSEEECCCG-------GGGGGSCCCEEEEEEESSSTTCCTTTHHHHHHHHHHTEE
T ss_pred HhcCCeEEEEeCCHHHHHHHHHhCCCCeEEeCcc-------cccccCCCCeEEEEehhhHhcCCHHHHHHHHHHHHHHcC
Confidence 3446699999999999999998 47899999887 7778889999999999999988 88999999999999
Q ss_pred CCCeEEEEEeCCC
Q 035840 78 KPNGVIAAWTYTM 90 (213)
Q Consensus 78 ~pgG~l~~~~~~~ 90 (213)
|||.+++.....
T Consensus 133 -pgG~l~i~~~~~ 144 (203)
T 3h2b_A 133 -DGGGLLMSFFSG 144 (203)
T ss_dssp -EEEEEEEEEECC
T ss_pred -CCcEEEEEEccC
Confidence 999998776553
No 15
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.34 E-value=2.6e-12 Score=101.89 Aligned_cols=80 Identities=13% Similarity=0.183 Sum_probs=71.4
Q ss_pred cccCCeEEEEeCCHHHHHHhhcC---CCceEEecCCCCcchhhccCCCCCCceeeeeechhhccC-ChhHHHHHHHHHhc
Q 035840 2 AKIYKNVIATDTSPKQLEFAIKL---PNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWF-DLPQFYKQVKWVLK 77 (213)
Q Consensus 2 a~~~~~V~gvD~S~~ml~~Ar~~---~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~-d~~~~~~e~~rvLk 77 (213)
+....+|+|+|+|+.|++.|++. +++++..+++ .++++++++||+|++..++|++ |+..++.++.|+||
T Consensus 72 ~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~-------~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~ 144 (242)
T 3l8d_A 72 SRTGYKAVGVDISEVMIQKGKERGEGPDLSFIKGDL-------SSLPFENEQFEAIMAINSLEWTEEPLRALNEIKRVLK 144 (242)
T ss_dssp HHTTCEEEEEESCHHHHHHHHTTTCBTTEEEEECBT-------TBCSSCTTCEEEEEEESCTTSSSCHHHHHHHHHHHEE
T ss_pred HHcCCeEEEEECCHHHHHHHHhhcccCCceEEEcch-------hcCCCCCCCccEEEEcChHhhccCHHHHHHHHHHHhC
Confidence 44567999999999999999985 6788888887 7788889999999999999988 99999999999999
Q ss_pred CCCeEEEEEeCC
Q 035840 78 KPNGVIAAWTYT 89 (213)
Q Consensus 78 ~pgG~l~~~~~~ 89 (213)
|||.+++....
T Consensus 145 -pgG~l~i~~~~ 155 (242)
T 3l8d_A 145 -SDGYACIAILG 155 (242)
T ss_dssp -EEEEEEEEEEC
T ss_pred -CCeEEEEEEcC
Confidence 99999887654
No 16
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.34 E-value=8.4e-13 Score=106.47 Aligned_cols=78 Identities=12% Similarity=-0.030 Sum_probs=64.3
Q ss_pred CcccCCeEEEEeCCHHHHHHhhcC-----------------------CCceEEecCCCCcchhhccCCCCC-Cceeeeee
Q 035840 1 LAKIYKNVIATDTSPKQLEFAIKL-----------------------PNIRYQLTPPTMSITELEQNVATQ-SSVDLVTI 56 (213)
Q Consensus 1 la~~~~~V~gvD~S~~ml~~Ar~~-----------------------~~v~~~~~~~~~~~~d~~~~~~~~-~sfDlV~~ 56 (213)
||+.+.+|+|||+|+.||+.|++. ++++|.++++ .++++++ ++||+|++
T Consensus 86 La~~G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~-------~~l~~~~~~~FD~V~~ 158 (252)
T 2gb4_A 86 FADRGHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSI-------FDLPRANIGKFDRIWD 158 (252)
T ss_dssp HHHTTCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCT-------TTGGGGCCCCEEEEEE
T ss_pred HHHCCCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECcc-------ccCCcccCCCEEEEEE
Confidence 466777999999999999999752 3577888777 7777654 89999999
Q ss_pred chhhccC---ChhHHHHHHHHHhcCCCeEEEEE
Q 035840 57 AAALHWF---DLPQFYKQVKWVLKKPNGVIAAW 86 (213)
Q Consensus 57 ~~~~hw~---d~~~~~~e~~rvLk~pgG~l~~~ 86 (213)
..+++++ ++..+++++.|+|| |||.|++.
T Consensus 159 ~~~l~~l~~~~~~~~l~~~~~~Lk-pGG~l~l~ 190 (252)
T 2gb4_A 159 RGALVAINPGDHDRYADIILSLLR-KEFQYLVA 190 (252)
T ss_dssp SSSTTTSCGGGHHHHHHHHHHTEE-EEEEEEEE
T ss_pred hhhhhhCCHHHHHHHHHHHHHHcC-CCeEEEEE
Confidence 9999988 45678999999999 99998643
No 17
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.33 E-value=2e-12 Score=103.51 Aligned_cols=79 Identities=22% Similarity=0.234 Sum_probs=69.6
Q ss_pred ccCC-eEEEEeCCHHHHHHhhcC---CCceEEecCCCCcchhhccCCCCCCceeeeeechhhccC-ChhHHHHHHHHHhc
Q 035840 3 KIYK-NVIATDTSPKQLEFAIKL---PNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWF-DLPQFYKQVKWVLK 77 (213)
Q Consensus 3 ~~~~-~V~gvD~S~~ml~~Ar~~---~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~-d~~~~~~e~~rvLk 77 (213)
..+. +|+|+|+|+.|++.|++. +++++..+++ +++++++++||+|++..++|++ |+..+++++.|+||
T Consensus 64 ~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~-------~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~Lk 136 (253)
T 3g5l_A 64 EHGAKKVLGIDLSERMLTEAKRKTTSPVVCYEQKAI-------EDIAIEPDAYNVVLSSLALHYIASFDDICKKVYINLK 136 (253)
T ss_dssp HTTCSEEEEEESCHHHHHHHHHHCCCTTEEEEECCG-------GGCCCCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEE
T ss_pred HcCCCEEEEEECCHHHHHHHHHhhccCCeEEEEcch-------hhCCCCCCCeEEEEEchhhhhhhhHHHHHHHHHHHcC
Confidence 3444 999999999999999984 5788888887 7888889999999999999999 99999999999999
Q ss_pred CCCeEEEEEeCC
Q 035840 78 KPNGVIAAWTYT 89 (213)
Q Consensus 78 ~pgG~l~~~~~~ 89 (213)
|||.|++....
T Consensus 137 -pgG~l~~~~~~ 147 (253)
T 3g5l_A 137 -SSGSFIFSVEH 147 (253)
T ss_dssp -EEEEEEEEEEC
T ss_pred -CCcEEEEEeCC
Confidence 99999876433
No 18
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.33 E-value=1.2e-12 Score=107.40 Aligned_cols=74 Identities=15% Similarity=0.205 Sum_probs=60.0
Q ss_pred EEEEeCCHHHHHHhhcC-------CCceEE--ecCCCCcchhhccC------CCCCCceeeeeechhhccC-ChhHHHHH
Q 035840 8 VIATDTSPKQLEFAIKL-------PNIRYQ--LTPPTMSITELEQN------VATQSSVDLVTIAAALHWF-DLPQFYKQ 71 (213)
Q Consensus 8 V~gvD~S~~ml~~Ar~~-------~~v~~~--~~~~~~~~~d~~~~------~~~~~sfDlV~~~~~~hw~-d~~~~~~e 71 (213)
++|+|+|++|++.|+++ +++++. .+++ +++ ++++++||+|+++.++||+ |+.+++++
T Consensus 85 ~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~-------~~~~~~~~~~~~~~~fD~V~~~~~l~~~~d~~~~l~~ 157 (292)
T 2aot_A 85 NEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETS-------SEYQSRMLEKKELQKWDFIHMIQMLYYVKDIPATLKF 157 (292)
T ss_dssp EEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCH-------HHHHHHHHTTTCCCCEEEEEEESCGGGCSCHHHHHHH
T ss_pred EEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecch-------hhhhhhhccccCCCceeEEEEeeeeeecCCHHHHHHH
Confidence 39999999999999863 245554 3333 333 3678999999999999999 99999999
Q ss_pred HHHHhcCCCeEEEEEeCC
Q 035840 72 VKWVLKKPNGVIAAWTYT 89 (213)
Q Consensus 72 ~~rvLk~pgG~l~~~~~~ 89 (213)
++|+|| |||.|++....
T Consensus 158 ~~r~Lk-pgG~l~i~~~~ 174 (292)
T 2aot_A 158 FHSLLG-TNAKMLIIVVS 174 (292)
T ss_dssp HHHTEE-EEEEEEEEEEC
T ss_pred HHHHcC-CCcEEEEEEec
Confidence 999999 99999876443
No 19
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.32 E-value=2.5e-12 Score=103.86 Aligned_cols=75 Identities=12% Similarity=0.053 Sum_probs=68.0
Q ss_pred CeEEEEeCCHHHHHHhhcC-------CCceEEecCCCCcchhhccCCCCCCceeeeeechhhccCChhHHHHHHHHHhcC
Q 035840 6 KNVIATDTSPKQLEFAIKL-------PNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWFDLPQFYKQVKWVLKK 78 (213)
Q Consensus 6 ~~V~gvD~S~~ml~~Ar~~-------~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~d~~~~~~e~~rvLk~ 78 (213)
.+|+|+|+|+.|++.|++. +++++..+++ +++++++++||+|++..+++++|+..+++++.|+||
T Consensus 70 ~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~-------~~~~~~~~~fD~i~~~~~~~~~~~~~~l~~~~~~Lk- 141 (267)
T 3kkz_A 70 GQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSM-------DDLPFRNEELDLIWSEGAIYNIGFERGLNEWRKYLK- 141 (267)
T ss_dssp SEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCT-------TSCCCCTTCEEEEEESSCGGGTCHHHHHHHHGGGEE-
T ss_pred CEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcCh-------hhCCCCCCCEEEEEEcCCceecCHHHHHHHHHHHcC-
Confidence 4999999999999999973 4589999888 788888999999999999999999999999999999
Q ss_pred CCeEEEEEeC
Q 035840 79 PNGVIAAWTY 88 (213)
Q Consensus 79 pgG~l~~~~~ 88 (213)
|||.+++...
T Consensus 142 pgG~l~~~~~ 151 (267)
T 3kkz_A 142 KGGYLAVSEC 151 (267)
T ss_dssp EEEEEEEEEE
T ss_pred CCCEEEEEEe
Confidence 9999987654
No 20
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.32 E-value=2.8e-12 Score=103.41 Aligned_cols=80 Identities=23% Similarity=0.291 Sum_probs=71.8
Q ss_pred cccCCeEEEEeCCHHHHHHhhcCCCceEEecCCCCcchhhccCCCCCCceeeeeechhhccC-ChhHHHHHHHHHhcCCC
Q 035840 2 AKIYKNVIATDTSPKQLEFAIKLPNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWF-DLPQFYKQVKWVLKKPN 80 (213)
Q Consensus 2 a~~~~~V~gvD~S~~ml~~Ar~~~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~-d~~~~~~e~~rvLk~pg 80 (213)
++...+|+|+|+|+.|++.|++.++++|.++++ +++|+++++||+|++..++|++ |+..+++++.|+|| |
T Consensus 53 ~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~d~-------~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~Lk--g 123 (261)
T 3ege_A 53 ANQGLFVYAVEPSIVMRQQAVVHPQVEWFTGYA-------ENLALPDKSVDGVISILAIHHFSHLEKSFQEMQRIIR--D 123 (261)
T ss_dssp HTTTCEEEEECSCHHHHHSSCCCTTEEEECCCT-------TSCCSCTTCBSEEEEESCGGGCSSHHHHHHHHHHHBC--S
T ss_pred HhCCCEEEEEeCCHHHHHHHHhccCCEEEECch-------hhCCCCCCCEeEEEEcchHhhccCHHHHHHHHHHHhC--C
Confidence 455689999999999999999988999999888 7888999999999999999988 99999999999999 8
Q ss_pred eEEEEEeCCC
Q 035840 81 GVIAAWTYTM 90 (213)
Q Consensus 81 G~l~~~~~~~ 90 (213)
|.+++..+..
T Consensus 124 G~~~~~~~~~ 133 (261)
T 3ege_A 124 GTIVLLTFDI 133 (261)
T ss_dssp SCEEEEEECG
T ss_pred cEEEEEEcCC
Confidence 9887776653
No 21
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.31 E-value=3e-12 Score=102.54 Aligned_cols=78 Identities=15% Similarity=0.092 Sum_probs=68.6
Q ss_pred ccCC-eEEEEeCCHHHHHHhhcC-------CCceEEecCCCCcchhhccCCCCCCceeeeeechhhccCChhHHHHHHHH
Q 035840 3 KIYK-NVIATDTSPKQLEFAIKL-------PNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWFDLPQFYKQVKW 74 (213)
Q Consensus 3 ~~~~-~V~gvD~S~~ml~~Ar~~-------~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~d~~~~~~e~~r 74 (213)
+.+. +|+|+|+|+.|++.|++. .++++.++++ +++|+++++||+|++..++|++|+..+++++.|
T Consensus 66 ~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~-------~~~~~~~~~fD~v~~~~~l~~~~~~~~l~~~~~ 138 (257)
T 3f4k_A 66 DYVKGQITGIDLFPDFIEIFNENAVKANCADRVKGITGSM-------DNLPFQNEELDLIWSEGAIYNIGFERGMNEWSK 138 (257)
T ss_dssp HHCCSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCT-------TSCSSCTTCEEEEEEESCSCCCCHHHHHHHHHT
T ss_pred HhCCCeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECCh-------hhCCCCCCCEEEEEecChHhhcCHHHHHHHHHH
Confidence 3443 999999999999999873 2388999888 788888999999999999999999999999999
Q ss_pred HhcCCCeEEEEEeC
Q 035840 75 VLKKPNGVIAAWTY 88 (213)
Q Consensus 75 vLk~pgG~l~~~~~ 88 (213)
+|| |||.+++...
T Consensus 139 ~L~-pgG~l~~~~~ 151 (257)
T 3f4k_A 139 YLK-KGGFIAVSEA 151 (257)
T ss_dssp TEE-EEEEEEEEEE
T ss_pred HcC-CCcEEEEEEe
Confidence 999 9999987753
No 22
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.31 E-value=5.7e-12 Score=98.06 Aligned_cols=76 Identities=17% Similarity=0.256 Sum_probs=68.8
Q ss_pred CeEEEEeCCHHHHHHhhcC-CCceEEecCCCCcchhhccCCCCCCceeeeeechhhccC-ChhHHHHHHHHHhcCCCeEE
Q 035840 6 KNVIATDTSPKQLEFAIKL-PNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWF-DLPQFYKQVKWVLKKPNGVI 83 (213)
Q Consensus 6 ~~V~gvD~S~~ml~~Ar~~-~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~-d~~~~~~e~~rvLk~pgG~l 83 (213)
.+|+|+|+|+.|++.|++. +++.+..+++ +++|+++++||+|++..++|++ |+..+++++.|+|| |||.+
T Consensus 57 ~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~-------~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~-pgG~l 128 (211)
T 2gs9_A 57 PQKVGVEPSEAMLAVGRRRAPEATWVRAWG-------EALPFPGESFDVVLLFTTLEFVEDVERVLLEARRVLR-PGGAL 128 (211)
T ss_dssp SEEEEECCCHHHHHHHHHHCTTSEEECCCT-------TSCCSCSSCEEEEEEESCTTTCSCHHHHHHHHHHHEE-EEEEE
T ss_pred CeEEEEeCCHHHHHHHHHhCCCcEEEEccc-------ccCCCCCCcEEEEEEcChhhhcCCHHHHHHHHHHHcC-CCCEE
Confidence 3899999999999999985 6888888887 7788889999999999999999 99999999999999 99999
Q ss_pred EEEeCC
Q 035840 84 AAWTYT 89 (213)
Q Consensus 84 ~~~~~~ 89 (213)
++....
T Consensus 129 ~i~~~~ 134 (211)
T 2gs9_A 129 VVGVLE 134 (211)
T ss_dssp EEEEEC
T ss_pred EEEecC
Confidence 877654
No 23
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.30 E-value=1.8e-12 Score=105.66 Aligned_cols=80 Identities=25% Similarity=0.391 Sum_probs=70.0
Q ss_pred cccCCeEEEEeCCHHHHHHhhcC-------CCceEEecCCCCcchhhccCC-CCCCceeeeeechhhccC-ChhHHHHHH
Q 035840 2 AKIYKNVIATDTSPKQLEFAIKL-------PNIRYQLTPPTMSITELEQNV-ATQSSVDLVTIAAALHWF-DLPQFYKQV 72 (213)
Q Consensus 2 a~~~~~V~gvD~S~~ml~~Ar~~-------~~v~~~~~~~~~~~~d~~~~~-~~~~sfDlV~~~~~~hw~-d~~~~~~e~ 72 (213)
+....+|+|+|+|+.|++.|++. +++++..+++ ++++ +.+++||+|++..++|++ |+..+++++
T Consensus 87 ~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~-------~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~ 159 (285)
T 4htf_A 87 AERGHQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAA-------QDVASHLETPVDLILFHAVLEWVADPRSVLQTL 159 (285)
T ss_dssp HHTTCEEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCG-------GGTGGGCSSCEEEEEEESCGGGCSCHHHHHHHH
T ss_pred HHCCCEEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCH-------HHhhhhcCCCceEEEECchhhcccCHHHHHHHH
Confidence 44567999999999999999973 5688888887 6665 778999999999999999 999999999
Q ss_pred HHHhcCCCeEEEEEeCC
Q 035840 73 KWVLKKPNGVIAAWTYT 89 (213)
Q Consensus 73 ~rvLk~pgG~l~~~~~~ 89 (213)
.|+|| |||.+++..+.
T Consensus 160 ~~~Lk-pgG~l~~~~~~ 175 (285)
T 4htf_A 160 WSVLR-PGGVLSLMFYN 175 (285)
T ss_dssp HHTEE-EEEEEEEEEEB
T ss_pred HHHcC-CCeEEEEEEeC
Confidence 99999 99999877655
No 24
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.30 E-value=3.9e-12 Score=99.44 Aligned_cols=76 Identities=20% Similarity=0.298 Sum_probs=68.8
Q ss_pred CeEEEEeCCHHHHHHhhcC------CCceEEecCCCCcchhhccCCCCCCceeeeeechhhccC-ChhHHHHHHHHHhcC
Q 035840 6 KNVIATDTSPKQLEFAIKL------PNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWF-DLPQFYKQVKWVLKK 78 (213)
Q Consensus 6 ~~V~gvD~S~~ml~~Ar~~------~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~-d~~~~~~e~~rvLk~ 78 (213)
.+|+|+|+|+.|++.|++. +++++..+++ +++++++++||+|++..++|++ |+..+++++.|+||
T Consensus 63 ~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~-------~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~Lk- 134 (219)
T 3dh0_A 63 GKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEE-------NKIPLPDNTVDFIFMAFTFHELSEPLKFLEELKRVAK- 134 (219)
T ss_dssp CEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBT-------TBCSSCSSCEEEEEEESCGGGCSSHHHHHHHHHHHEE-
T ss_pred cEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeccc-------ccCCCCCCCeeEEEeehhhhhcCCHHHHHHHHHHHhC-
Confidence 6999999999999999873 5788888887 7788889999999999999988 99999999999999
Q ss_pred CCeEEEEEeCC
Q 035840 79 PNGVIAAWTYT 89 (213)
Q Consensus 79 pgG~l~~~~~~ 89 (213)
|||.+++..+.
T Consensus 135 pgG~l~i~~~~ 145 (219)
T 3dh0_A 135 PFAYLAIIDWK 145 (219)
T ss_dssp EEEEEEEEEEC
T ss_pred CCeEEEEEEec
Confidence 99999887654
No 25
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.30 E-value=3.9e-12 Score=102.09 Aligned_cols=77 Identities=14% Similarity=0.178 Sum_probs=69.3
Q ss_pred CCeEEEEeCCHHHHHHhhcC----CCceEEecCCCCcchhhccCCCCCCceeeeeechhhccC---ChhHHHHHHHHHhc
Q 035840 5 YKNVIATDTSPKQLEFAIKL----PNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWF---DLPQFYKQVKWVLK 77 (213)
Q Consensus 5 ~~~V~gvD~S~~ml~~Ar~~----~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~---d~~~~~~e~~rvLk 77 (213)
..+|+|+|+|+.|++.|++. +++++..+++ .++|+++++||+|++..++|++ |+..+++++.|+||
T Consensus 78 ~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~-------~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~ 150 (266)
T 3ujc_A 78 GAHTHGIDICSNIVNMANERVSGNNKIIFEANDI-------LTKEFPENNFDLIYSRDAILALSLENKNKLFQKCYKWLK 150 (266)
T ss_dssp CCEEEEEESCHHHHHHHHHTCCSCTTEEEEECCT-------TTCCCCTTCEEEEEEESCGGGSCHHHHHHHHHHHHHHEE
T ss_pred CCEEEEEeCCHHHHHHHHHHhhcCCCeEEEECcc-------ccCCCCCCcEEEEeHHHHHHhcChHHHHHHHHHHHHHcC
Confidence 56999999999999999985 5788999888 7778889999999999999987 88899999999999
Q ss_pred CCCeEEEEEeCC
Q 035840 78 KPNGVIAAWTYT 89 (213)
Q Consensus 78 ~pgG~l~~~~~~ 89 (213)
|||.+++....
T Consensus 151 -pgG~l~~~~~~ 161 (266)
T 3ujc_A 151 -PTGTLLITDYC 161 (266)
T ss_dssp -EEEEEEEEEEE
T ss_pred -CCCEEEEEEec
Confidence 99999887654
No 26
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.30 E-value=2.2e-12 Score=103.26 Aligned_cols=74 Identities=15% Similarity=0.077 Sum_probs=65.9
Q ss_pred CCeEEEEeCCHHHHHHhhcC-------CCceEEecCCCCcchhhccCCCCCCceeeeeechhhccC-ChhHHHHHHHHHh
Q 035840 5 YKNVIATDTSPKQLEFAIKL-------PNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWF-DLPQFYKQVKWVL 76 (213)
Q Consensus 5 ~~~V~gvD~S~~ml~~Ar~~-------~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~-d~~~~~~e~~rvL 76 (213)
..+|+|+|+|+.|++.|++. +++++.++++ +++++ +++||+|++..++|++ |+..+++++.|+|
T Consensus 59 ~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~-------~~~~~-~~~fD~V~~~~~~~~~~~~~~~l~~~~r~L 130 (256)
T 1nkv_A 59 GITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDA-------AGYVA-NEKCDVAACVGATWIAGGFAGAEELLAQSL 130 (256)
T ss_dssp CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCC-------TTCCC-SSCEEEEEEESCGGGTSSSHHHHHHHTTSE
T ss_pred CCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECCh-------HhCCc-CCCCCEEEECCChHhcCCHHHHHHHHHHHc
Confidence 35999999999999999872 4689999888 77777 8899999999999988 9999999999999
Q ss_pred cCCCeEEEEEe
Q 035840 77 KKPNGVIAAWT 87 (213)
Q Consensus 77 k~pgG~l~~~~ 87 (213)
| |||.|++..
T Consensus 131 k-pgG~l~~~~ 140 (256)
T 1nkv_A 131 K-PGGIMLIGE 140 (256)
T ss_dssp E-EEEEEEEEE
T ss_pred C-CCeEEEEec
Confidence 9 999998764
No 27
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.30 E-value=4.1e-12 Score=105.08 Aligned_cols=77 Identities=16% Similarity=0.128 Sum_probs=69.4
Q ss_pred CCeEEEEeCCHHHHHHhhcC-------CCceEEecCCCCcchhhccCCCCCCceeeeeechhhccCChhHHHHHHHHHhc
Q 035840 5 YKNVIATDTSPKQLEFAIKL-------PNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWFDLPQFYKQVKWVLK 77 (213)
Q Consensus 5 ~~~V~gvD~S~~ml~~Ar~~-------~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~d~~~~~~e~~rvLk 77 (213)
..+|+|+|+|+.|++.|++. .++++..+++ +++|+++++||+|++..++|++|+..+++++.|+||
T Consensus 140 ~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~-------~~~~~~~~~fD~V~~~~~l~~~~~~~~l~~~~~~Lk 212 (312)
T 3vc1_A 140 GSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNM-------LDTPFDKGAVTASWNNESTMYVDLHDLFSEHSRFLK 212 (312)
T ss_dssp CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCT-------TSCCCCTTCEEEEEEESCGGGSCHHHHHHHHHHHEE
T ss_pred CCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECCh-------hcCCCCCCCEeEEEECCchhhCCHHHHHHHHHHHcC
Confidence 57999999999999999973 3689999888 788889999999999999999999999999999999
Q ss_pred CCCeEEEEEeCC
Q 035840 78 KPNGVIAAWTYT 89 (213)
Q Consensus 78 ~pgG~l~~~~~~ 89 (213)
|||.+++....
T Consensus 213 -pgG~l~~~~~~ 223 (312)
T 3vc1_A 213 -VGGRYVTITGC 223 (312)
T ss_dssp -EEEEEEEEEEE
T ss_pred -CCcEEEEEEcc
Confidence 99999877643
No 28
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.29 E-value=8.1e-12 Score=97.17 Aligned_cols=77 Identities=17% Similarity=0.154 Sum_probs=68.7
Q ss_pred CCeEEEEeCCHHHHHHhhcC-------CCceEEecCCCCcchhhccCCCCCCceeeeeechhhccC-ChhHHHHHHHHHh
Q 035840 5 YKNVIATDTSPKQLEFAIKL-------PNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWF-DLPQFYKQVKWVL 76 (213)
Q Consensus 5 ~~~V~gvD~S~~ml~~Ar~~-------~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~-d~~~~~~e~~rvL 76 (213)
..+|+|+|+|+.|++.|++. +++++..+++ +++++++++||+|++..++|++ |+..+++++.|+|
T Consensus 66 ~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~-------~~~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L 138 (219)
T 3dlc_A 66 DFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDV-------HNIPIEDNYADLIVSRGSVFFWEDVATAFREIYRIL 138 (219)
T ss_dssp EEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBT-------TBCSSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHE
T ss_pred CCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCH-------HHCCCCcccccEEEECchHhhccCHHHHHHHHHHhC
Confidence 35899999999999999973 4688999887 7788999999999999999988 9999999999999
Q ss_pred cCCCeEEEEEeCC
Q 035840 77 KKPNGVIAAWTYT 89 (213)
Q Consensus 77 k~pgG~l~~~~~~ 89 (213)
| |||.+++....
T Consensus 139 ~-pgG~l~~~~~~ 150 (219)
T 3dlc_A 139 K-SGGKTYIGGGF 150 (219)
T ss_dssp E-EEEEEEEEECC
T ss_pred C-CCCEEEEEecc
Confidence 9 99999887543
No 29
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.29 E-value=8.3e-12 Score=106.35 Aligned_cols=76 Identities=26% Similarity=0.260 Sum_probs=68.1
Q ss_pred CCeEEEEeCCHHHHHHhhcC--------------CCceEEecCCCCcchhhccC------CCCCCceeeeeechhhccC-
Q 035840 5 YKNVIATDTSPKQLEFAIKL--------------PNIRYQLTPPTMSITELEQN------VATQSSVDLVTIAAALHWF- 63 (213)
Q Consensus 5 ~~~V~gvD~S~~ml~~Ar~~--------------~~v~~~~~~~~~~~~d~~~~------~~~~~sfDlV~~~~~~hw~- 63 (213)
..+|+|+|+|+.|++.|++. ++++|..+++ +++ ++++++||+|++..++||+
T Consensus 108 ~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~-------~~l~~~~~~~~~~~~fD~V~~~~~l~~~~ 180 (383)
T 4fsd_A 108 HGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFI-------ENLATAEPEGVPDSSVDIVISNCVCNLST 180 (383)
T ss_dssp TCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCT-------TCGGGCBSCCCCTTCEEEEEEESCGGGCS
T ss_pred CCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccH-------HHhhhcccCCCCCCCEEEEEEccchhcCC
Confidence 35999999999999999974 5899999988 444 8899999999999999999
Q ss_pred ChhHHHHHHHHHhcCCCeEEEEEeC
Q 035840 64 DLPQFYKQVKWVLKKPNGVIAAWTY 88 (213)
Q Consensus 64 d~~~~~~e~~rvLk~pgG~l~~~~~ 88 (213)
|+..+++++.|+|| |||.|++...
T Consensus 181 d~~~~l~~~~r~Lk-pgG~l~i~~~ 204 (383)
T 4fsd_A 181 NKLALFKEIHRVLR-DGGELYFSDV 204 (383)
T ss_dssp CHHHHHHHHHHHEE-EEEEEEEEEE
T ss_pred CHHHHHHHHHHHcC-CCCEEEEEEe
Confidence 99999999999999 9999987654
No 30
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.28 E-value=7e-12 Score=97.88 Aligned_cols=79 Identities=22% Similarity=0.254 Sum_probs=67.5
Q ss_pred cccCCeEEEEeCCHHHHHHhhcC----CCceEEecCCCCcchhhccCCCCCCceeeeeechhhccC-Ch---hHHHHHHH
Q 035840 2 AKIYKNVIATDTSPKQLEFAIKL----PNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWF-DL---PQFYKQVK 73 (213)
Q Consensus 2 a~~~~~V~gvD~S~~ml~~Ar~~----~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~-d~---~~~~~e~~ 73 (213)
+..+.+|+|+|+|+.|++.|++. +++++.++++ ++++ ++++||+|++..++||+ |+ .+++.++.
T Consensus 70 ~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~-------~~~~-~~~~fD~v~~~~~l~~~~~~~~~~~~l~~~~ 141 (216)
T 3ofk_A 70 APHCKRLTVIDVMPRAIGRACQRTKRWSHISWAATDI-------LQFS-TAELFDLIVVAEVLYYLEDMTQMRTAIDNMV 141 (216)
T ss_dssp GGGEEEEEEEESCHHHHHHHHHHTTTCSSEEEEECCT-------TTCC-CSCCEEEEEEESCGGGSSSHHHHHHHHHHHH
T ss_pred HHcCCEEEEEECCHHHHHHHHHhcccCCCeEEEEcch-------hhCC-CCCCccEEEEccHHHhCCCHHHHHHHHHHHH
Confidence 45667999999999999999983 5788999888 6666 68899999999999999 66 47799999
Q ss_pred HHhcCCCeEEEEEeCC
Q 035840 74 WVLKKPNGVIAAWTYT 89 (213)
Q Consensus 74 rvLk~pgG~l~~~~~~ 89 (213)
|+|| |||.|++....
T Consensus 142 ~~L~-pgG~l~~~~~~ 156 (216)
T 3ofk_A 142 KMLA-PGGHLVFGSAR 156 (216)
T ss_dssp HTEE-EEEEEEEEEEC
T ss_pred HHcC-CCCEEEEEecC
Confidence 9999 99999876543
No 31
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.27 E-value=6.5e-12 Score=97.41 Aligned_cols=79 Identities=18% Similarity=0.135 Sum_probs=68.5
Q ss_pred ccCCeEEEEeCCHHHHHHhhcC-----CCceEEecCCCCcchhhccCCCCCCceeeeeechhhccC---ChhHHHHHHHH
Q 035840 3 KIYKNVIATDTSPKQLEFAIKL-----PNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWF---DLPQFYKQVKW 74 (213)
Q Consensus 3 ~~~~~V~gvD~S~~ml~~Ar~~-----~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~---d~~~~~~e~~r 74 (213)
....+|+|+|+|+.|++.|++. .++++..+++ +++++++++||+|++..++|++ ++..+++++.|
T Consensus 44 ~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~-------~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~ 116 (209)
T 2p8j_A 44 EDGYKTYGIEISDLQLKKAENFSRENNFKLNISKGDI-------RKLPFKDESMSFVYSYGTIFHMRKNDVKEAIDEIKR 116 (209)
T ss_dssp HTTCEEEEEECCHHHHHHHHHHHHHHTCCCCEEECCT-------TSCCSCTTCEEEEEECSCGGGSCHHHHHHHHHHHHH
T ss_pred hCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEECch-------hhCCCCCCceeEEEEcChHHhCCHHHHHHHHHHHHH
Confidence 3456999999999999999873 5688888887 7788889999999999999877 77899999999
Q ss_pred HhcCCCeEEEEEeCC
Q 035840 75 VLKKPNGVIAAWTYT 89 (213)
Q Consensus 75 vLk~pgG~l~~~~~~ 89 (213)
+|| |||.+++..+.
T Consensus 117 ~Lk-pgG~l~~~~~~ 130 (209)
T 2p8j_A 117 VLK-PGGLACINFLT 130 (209)
T ss_dssp HEE-EEEEEEEEEEE
T ss_pred HcC-CCcEEEEEEec
Confidence 999 99999877655
No 32
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.26 E-value=1e-11 Score=99.95 Aligned_cols=81 Identities=16% Similarity=0.183 Sum_probs=69.2
Q ss_pred cccCCeEEEEeCCHHHHHHhhc-CCCceEEecCCCCcchhhccCCCCCCceeeeeech-hhccC----ChhHHHHHHHHH
Q 035840 2 AKIYKNVIATDTSPKQLEFAIK-LPNIRYQLTPPTMSITELEQNVATQSSVDLVTIAA-ALHWF----DLPQFYKQVKWV 75 (213)
Q Consensus 2 a~~~~~V~gvD~S~~ml~~Ar~-~~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~-~~hw~----d~~~~~~e~~rv 75 (213)
+..+.+|+|+|+|+.|++.|++ .+++++.++++ .++++ +++||+|++.. ++||+ +...+++++.++
T Consensus 69 ~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~-------~~~~~-~~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~ 140 (263)
T 3pfg_A 69 ADSFGTVEGLELSADMLAIARRRNPDAVLHHGDM-------RDFSL-GRRFSAVTCMFSSIGHLAGQAELDAALERFAAH 140 (263)
T ss_dssp TTTSSEEEEEESCHHHHHHHHHHCTTSEEEECCT-------TTCCC-SCCEEEEEECTTGGGGSCHHHHHHHHHHHHHHT
T ss_pred HHcCCeEEEEECCHHHHHHHHhhCCCCEEEECCh-------HHCCc-cCCcCEEEEcCchhhhcCCHHHHHHHHHHHHHh
Confidence 5567799999999999999998 46889999888 77776 78899999998 99988 556889999999
Q ss_pred hcCCCeEEEEEeCCCC
Q 035840 76 LKKPNGVIAAWTYTMP 91 (213)
Q Consensus 76 Lk~pgG~l~~~~~~~~ 91 (213)
|| |||.|++..+..+
T Consensus 141 L~-pgG~l~i~~~~~~ 155 (263)
T 3pfg_A 141 VL-PDGVVVVEPWWFP 155 (263)
T ss_dssp EE-EEEEEEECCCCCT
T ss_pred cC-CCcEEEEEeccCh
Confidence 99 9999988655433
No 33
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.26 E-value=1.2e-11 Score=97.89 Aligned_cols=78 Identities=27% Similarity=0.298 Sum_probs=68.2
Q ss_pred cCC-eEEEEeCCHHHHHHhhcC---CCceEEecCCCCcchhhccCCCCCCceeeeeechhhccC-ChhHHHHHHHHHhcC
Q 035840 4 IYK-NVIATDTSPKQLEFAIKL---PNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWF-DLPQFYKQVKWVLKK 78 (213)
Q Consensus 4 ~~~-~V~gvD~S~~ml~~Ar~~---~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~-d~~~~~~e~~rvLk~ 78 (213)
... +|+|+|+|+.|++.|++. .++++..+++ .++++++++||+|++..++|++ ++..+++++.++||
T Consensus 64 ~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~-------~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~- 135 (243)
T 3bkw_A 64 HGASYVLGLDLSEKMLARARAAGPDTGITYERADL-------DKLHLPQDSFDLAYSSLALHYVEDVARLFRTVHQALS- 135 (243)
T ss_dssp TTCSEEEEEESCHHHHHHHHHTSCSSSEEEEECCG-------GGCCCCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEE-
T ss_pred CCCCeEEEEcCCHHHHHHHHHhcccCCceEEEcCh-------hhccCCCCCceEEEEeccccccchHHHHHHHHHHhcC-
Confidence 344 999999999999999985 3678888877 7778888999999999999988 99999999999999
Q ss_pred CCeEEEEEeCC
Q 035840 79 PNGVIAAWTYT 89 (213)
Q Consensus 79 pgG~l~~~~~~ 89 (213)
|||.+++....
T Consensus 136 pgG~l~~~~~~ 146 (243)
T 3bkw_A 136 PGGHFVFSTEH 146 (243)
T ss_dssp EEEEEEEEEEC
T ss_pred cCcEEEEEeCC
Confidence 99999876543
No 34
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.26 E-value=1e-11 Score=97.15 Aligned_cols=79 Identities=15% Similarity=0.068 Sum_probs=67.6
Q ss_pred cccCCeEEEEeCCHHHHHHhhcC-C-CceEEecCCCCcchhhccCCCCCCceeeeeechhhccC-ChhH--HHHHHHHHh
Q 035840 2 AKIYKNVIATDTSPKQLEFAIKL-P-NIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWF-DLPQ--FYKQVKWVL 76 (213)
Q Consensus 2 a~~~~~V~gvD~S~~ml~~Ar~~-~-~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~-d~~~--~~~e~~rvL 76 (213)
+....+|+|+|+|+.|++.|++. + ++++..+++ .+++++ ++||+|++..++|++ +... +++++.|+|
T Consensus 64 ~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~d~-------~~~~~~-~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L 135 (220)
T 3hnr_A 64 LLAGRTVYGIEPSREMRMIAKEKLPKEFSITEGDF-------LSFEVP-TSIDTIVSTYAFHHLTDDEKNVAIAKYSQLL 135 (220)
T ss_dssp HHTTCEEEEECSCHHHHHHHHHHSCTTCCEESCCS-------SSCCCC-SCCSEEEEESCGGGSCHHHHHHHHHHHHHHS
T ss_pred HhCCCeEEEEeCCHHHHHHHHHhCCCceEEEeCCh-------hhcCCC-CCeEEEEECcchhcCChHHHHHHHHHHHHhc
Confidence 34567999999999999999984 3 788888887 777777 899999999999999 6555 999999999
Q ss_pred cCCCeEEEEEeCC
Q 035840 77 KKPNGVIAAWTYT 89 (213)
Q Consensus 77 k~pgG~l~~~~~~ 89 (213)
| |||.+++....
T Consensus 136 k-pgG~l~i~~~~ 147 (220)
T 3hnr_A 136 N-KGGKIVFADTI 147 (220)
T ss_dssp C-TTCEEEEEEEC
T ss_pred C-CCCEEEEEecc
Confidence 9 99999887543
No 35
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.24 E-value=2e-11 Score=95.07 Aligned_cols=81 Identities=21% Similarity=0.194 Sum_probs=69.4
Q ss_pred cccCCeEEEEeCCHHHHHHhhcC--CCceEEecCCCCcchhhccCCCCCCceeeeeechhhccC-Ch--hHHHHHHHHHh
Q 035840 2 AKIYKNVIATDTSPKQLEFAIKL--PNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWF-DL--PQFYKQVKWVL 76 (213)
Q Consensus 2 a~~~~~V~gvD~S~~ml~~Ar~~--~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~-d~--~~~~~e~~rvL 76 (213)
+....+|+|+|+|+.|++.|++. +++++..+++ .++ +++++||+|++..++|++ +. ..+++++.|+|
T Consensus 65 ~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~d~-------~~~-~~~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L 136 (218)
T 3ou2_A 65 SGLADRVTALDGSAEMIAEAGRHGLDNVEFRQQDL-------FDW-TPDRQWDAVFFAHWLAHVPDDRFEAFWESVRSAV 136 (218)
T ss_dssp HHHSSEEEEEESCHHHHHHHGGGCCTTEEEEECCT-------TSC-CCSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHE
T ss_pred HhcCCeEEEEeCCHHHHHHHHhcCCCCeEEEeccc-------ccC-CCCCceeEEEEechhhcCCHHHHHHHHHHHHHHc
Confidence 34467999999999999999973 5788999887 666 788999999999999999 43 89999999999
Q ss_pred cCCCeEEEEEeCCCC
Q 035840 77 KKPNGVIAAWTYTMP 91 (213)
Q Consensus 77 k~pgG~l~~~~~~~~ 91 (213)
| |||.+++.....+
T Consensus 137 ~-pgG~l~~~~~~~~ 150 (218)
T 3ou2_A 137 A-PGGVVEFVDVTDH 150 (218)
T ss_dssp E-EEEEEEEEEECCC
T ss_pred C-CCeEEEEEeCCCC
Confidence 9 9999988776643
No 36
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.24 E-value=7.3e-12 Score=99.57 Aligned_cols=79 Identities=10% Similarity=-0.019 Sum_probs=67.0
Q ss_pred cccCCeEEEEeCCHHHHHHhhcCCCceEEecCCCCcchhhccC--CCCCCceeeeeechhhccC-Ch--hHHHHHHHHHh
Q 035840 2 AKIYKNVIATDTSPKQLEFAIKLPNIRYQLTPPTMSITELEQN--VATQSSVDLVTIAAALHWF-DL--PQFYKQVKWVL 76 (213)
Q Consensus 2 a~~~~~V~gvD~S~~ml~~Ar~~~~v~~~~~~~~~~~~d~~~~--~~~~~sfDlV~~~~~~hw~-d~--~~~~~e~~rvL 76 (213)
+....+|+|+|+|+.|++.|++. +++..+++ .+. ++++++||+|++..++|++ ++ ..+++++.|+|
T Consensus 60 ~~~~~~v~gvD~s~~~~~~a~~~--~~~~~~d~-------~~~~~~~~~~~fD~i~~~~~l~~~~~~~~~~~l~~~~~~L 130 (240)
T 3dli_A 60 KEEGIESIGVDINEDMIKFCEGK--FNVVKSDA-------IEYLKSLPDKYLDGVMISHFVEHLDPERLFELLSLCYSKM 130 (240)
T ss_dssp HHHTCCEEEECSCHHHHHHHHTT--SEEECSCH-------HHHHHTSCTTCBSEEEEESCGGGSCGGGHHHHHHHHHHHB
T ss_pred HhCCCcEEEEECCHHHHHHHHhh--cceeeccH-------HHHhhhcCCCCeeEEEECCchhhCCcHHHHHHHHHHHHHc
Confidence 34466899999999999999976 78888776 553 7889999999999999999 33 79999999999
Q ss_pred cCCCeEEEEEeCCC
Q 035840 77 KKPNGVIAAWTYTM 90 (213)
Q Consensus 77 k~pgG~l~~~~~~~ 90 (213)
| |||.+++...+.
T Consensus 131 k-pgG~l~~~~~~~ 143 (240)
T 3dli_A 131 K-YSSYIVIESPNP 143 (240)
T ss_dssp C-TTCCEEEEEECT
T ss_pred C-CCcEEEEEeCCc
Confidence 9 999998776553
No 37
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.23 E-value=2.8e-11 Score=95.15 Aligned_cols=82 Identities=21% Similarity=0.231 Sum_probs=70.0
Q ss_pred cccCCeEEEEeCCHHHHHHhhcC---C--------CceEEecCCCCcchhhccCCCCCCceeeeeechhhccC-Chh---
Q 035840 2 AKIYKNVIATDTSPKQLEFAIKL---P--------NIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWF-DLP--- 66 (213)
Q Consensus 2 a~~~~~V~gvD~S~~ml~~Ar~~---~--------~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~-d~~--- 66 (213)
+....+|+|+|+|+.|++.|++. . ++++..+++ ..+++++++||+|++..+++++ |+.
T Consensus 49 ~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~-------~~~~~~~~~~D~v~~~~~l~~~~~~~~~~ 121 (235)
T 3sm3_A 49 ASKGYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENA-------SSLSFHDSSFDFAVMQAFLTSVPDPKERS 121 (235)
T ss_dssp HHTTCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCT-------TSCCSCTTCEEEEEEESCGGGCCCHHHHH
T ss_pred HhCCCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecc-------cccCCCCCceeEEEEcchhhcCCCHHHHH
Confidence 34567999999999999999972 1 357788777 7788889999999999999988 887
Q ss_pred HHHHHHHHHhcCCCeEEEEEeCCCC
Q 035840 67 QFYKQVKWVLKKPNGVIAAWTYTMP 91 (213)
Q Consensus 67 ~~~~e~~rvLk~pgG~l~~~~~~~~ 91 (213)
.+++++.|+|| |||.+++..+...
T Consensus 122 ~~l~~~~~~L~-pgG~l~~~~~~~~ 145 (235)
T 3sm3_A 122 RIIKEVFRVLK-PGAYLYLVEFGQN 145 (235)
T ss_dssp HHHHHHHHHEE-EEEEEEEEEEBCC
T ss_pred HHHHHHHHHcC-CCeEEEEEECCcc
Confidence 89999999999 9999998876644
No 38
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.22 E-value=2.8e-11 Score=95.53 Aligned_cols=78 Identities=21% Similarity=0.227 Sum_probs=66.3
Q ss_pred CCeEEEEeCCHHHHHHhhcC----CCceEEecCCCCcchhhccCCCCCCceeeeeechhhccCChh---HHHHHHHHHhc
Q 035840 5 YKNVIATDTSPKQLEFAIKL----PNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWFDLP---QFYKQVKWVLK 77 (213)
Q Consensus 5 ~~~V~gvD~S~~ml~~Ar~~----~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~d~~---~~~~e~~rvLk 77 (213)
..+|+|+|+|+.|++.|++. +++++..+++ ++++++ ++||+|++..++|+++.. .+++++.|+||
T Consensus 68 ~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~-------~~~~~~-~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~Lk 139 (234)
T 3dtn_A 68 EATFTLVDMSEKMLEIAKNRFRGNLKVKYIEADY-------SKYDFE-EKYDMVVSALSIHHLEDEDKKELYKRSYSILK 139 (234)
T ss_dssp TCEEEEEESCHHHHHHHHHHTCSCTTEEEEESCT-------TTCCCC-SCEEEEEEESCGGGSCHHHHHHHHHHHHHHEE
T ss_pred CCeEEEEECCHHHHHHHHHhhccCCCEEEEeCch-------hccCCC-CCceEEEEeCccccCCHHHHHHHHHHHHHhcC
Confidence 56999999999999999973 3788888887 777776 889999999999999433 48999999999
Q ss_pred CCCeEEEEEeCCCC
Q 035840 78 KPNGVIAAWTYTMP 91 (213)
Q Consensus 78 ~pgG~l~~~~~~~~ 91 (213)
|||.+++.....+
T Consensus 140 -pgG~l~~~~~~~~ 152 (234)
T 3dtn_A 140 -ESGIFINADLVHG 152 (234)
T ss_dssp -EEEEEEEEEECBC
T ss_pred -CCcEEEEEEecCC
Confidence 9999998766543
No 39
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.22 E-value=2e-11 Score=99.65 Aligned_cols=76 Identities=13% Similarity=0.085 Sum_probs=66.9
Q ss_pred CCeEEEEeCCHHHHHHhhcC-----CCceEEecCCCCcchhhccCCCCCCceeeeeechhhccC-ChhHHHHHHHHHhcC
Q 035840 5 YKNVIATDTSPKQLEFAIKL-----PNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWF-DLPQFYKQVKWVLKK 78 (213)
Q Consensus 5 ~~~V~gvD~S~~ml~~Ar~~-----~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~-d~~~~~~e~~rvLk~ 78 (213)
..+|+|+|+|+.|++.|++. .++++.++++ +++++ +++||+|++..++|++ |+..+++++.|+||
T Consensus 47 ~~~v~gvD~s~~~~~~a~~~~~~~~~~v~~~~~d~-------~~~~~-~~~fD~v~~~~~l~~~~~~~~~l~~~~~~Lk- 117 (284)
T 3gu3_A 47 GSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDA-------TEIEL-NDKYDIAICHAFLLHMTTPETMLQKMIHSVK- 117 (284)
T ss_dssp TCEEEEEESCHHHHHHHHHHHHSSSSEEEEEESCT-------TTCCC-SSCEEEEEEESCGGGCSSHHHHHHHHHHTEE-
T ss_pred CCEEEEEECCHHHHHHHHHHHHhcCCceEEEEcch-------hhcCc-CCCeeEEEECChhhcCCCHHHHHHHHHHHcC-
Confidence 46999999999999999873 3788899888 77777 4689999999999988 99999999999999
Q ss_pred CCeEEEEEeCC
Q 035840 79 PNGVIAAWTYT 89 (213)
Q Consensus 79 pgG~l~~~~~~ 89 (213)
|||.|++....
T Consensus 118 pgG~l~~~~~~ 128 (284)
T 3gu3_A 118 KGGKIICFEPH 128 (284)
T ss_dssp EEEEEEEEECC
T ss_pred CCCEEEEEecc
Confidence 99999877654
No 40
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.21 E-value=5.2e-11 Score=96.11 Aligned_cols=73 Identities=19% Similarity=0.204 Sum_probs=61.8
Q ss_pred CCeEEEEeCCHHHHHHhhcC-CCceEEecCCCCcchhhccCCCCCCceeeeeechhhccCChhHHHHHHHHHhcCCCeEE
Q 035840 5 YKNVIATDTSPKQLEFAIKL-PNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWFDLPQFYKQVKWVLKKPNGVI 83 (213)
Q Consensus 5 ~~~V~gvD~S~~ml~~Ar~~-~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~d~~~~~~e~~rvLk~pgG~l 83 (213)
..+|+|+|+|+.|++.|++. +++.+..+++ +++++++++||+|++..+ ..+++++.|+|| |||.+
T Consensus 109 ~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~-------~~~~~~~~~fD~v~~~~~------~~~l~~~~~~L~-pgG~l 174 (269)
T 1p91_A 109 EITTFGLDVSKVAIKAAAKRYPQVTFCVASS-------HRLPFSDTSMDAIIRIYA------PCKAEELARVVK-PGGWV 174 (269)
T ss_dssp TSEEEEEESCHHHHHHHHHHCTTSEEEECCT-------TSCSBCTTCEEEEEEESC------CCCHHHHHHHEE-EEEEE
T ss_pred CCeEEEEeCCHHHHHHHHHhCCCcEEEEcch-------hhCCCCCCceeEEEEeCC------hhhHHHHHHhcC-CCcEE
Confidence 46999999999999999984 6788999887 778888999999998655 356899999999 99999
Q ss_pred EEEeCCCC
Q 035840 84 AAWTYTMP 91 (213)
Q Consensus 84 ~~~~~~~~ 91 (213)
++...+..
T Consensus 175 ~~~~~~~~ 182 (269)
T 1p91_A 175 ITATPGPR 182 (269)
T ss_dssp EEEEECTT
T ss_pred EEEEcCHH
Confidence 87765543
No 41
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.21 E-value=4.6e-12 Score=96.05 Aligned_cols=69 Identities=13% Similarity=0.136 Sum_probs=61.0
Q ss_pred EEeCCHHHHHHhhcC--CCceEEecCCCCcchhhccCCC---CCCceeeeeechhhccC--ChhHHHHHHHHHhcCCCeE
Q 035840 10 ATDTSPKQLEFAIKL--PNIRYQLTPPTMSITELEQNVA---TQSSVDLVTIAAALHWF--DLPQFYKQVKWVLKKPNGV 82 (213)
Q Consensus 10 gvD~S~~ml~~Ar~~--~~v~~~~~~~~~~~~d~~~~~~---~~~sfDlV~~~~~~hw~--d~~~~~~e~~rvLk~pgG~ 82 (213)
++|+|+.|++.|+++ .++++.++++ +++++ ++++||+|+++.++||+ |...++++++|+|| |||.
T Consensus 25 ~vD~s~~ml~~a~~~~~~~~~~~~~d~-------~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~l~~~~r~Lk-pgG~ 96 (176)
T 2ld4_A 25 PVEALKGLVDKLQALTGNEGRVSVENI-------KQLLQSAHKESSFDIILSGLVPGSTTLHSAEILAEIARILR-PGGC 96 (176)
T ss_dssp CHHHHHHHHHHHHHHTTTTSEEEEEEG-------GGGGGGCCCSSCEEEEEECCSTTCCCCCCHHHHHHHHHHEE-EEEE
T ss_pred eeeCCHHHHHHHHHhcccCcEEEEech-------hcCccccCCCCCEeEEEECChhhhcccCHHHHHHHHHHHCC-CCEE
Confidence 389999999999984 3688888877 66666 88999999999999998 99999999999999 9999
Q ss_pred EEEE
Q 035840 83 IAAW 86 (213)
Q Consensus 83 l~~~ 86 (213)
|++.
T Consensus 97 l~~~ 100 (176)
T 2ld4_A 97 LFLK 100 (176)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9874
No 42
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.20 E-value=2.1e-11 Score=91.59 Aligned_cols=77 Identities=18% Similarity=0.259 Sum_probs=66.6
Q ss_pred cccCCeEEEEeCCHHHHHHhhc-CCCceEEecCCCCcchhhccCCCCCCceeeeeechhhccC-ChhHHHHHHHHHhcCC
Q 035840 2 AKIYKNVIATDTSPKQLEFAIK-LPNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWF-DLPQFYKQVKWVLKKP 79 (213)
Q Consensus 2 a~~~~~V~gvD~S~~ml~~Ar~-~~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~-d~~~~~~e~~rvLk~p 79 (213)
+..+.+|+|+|+|+.|++.|++ .+++++..++ .++++++||+|++..++|++ |+..+++++.|+|| |
T Consensus 36 ~~~~~~v~~vD~s~~~~~~a~~~~~~v~~~~~d----------~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~-p 104 (170)
T 3i9f_A 36 LEFATKLYCIDINVIALKEVKEKFDSVITLSDP----------KEIPDNSVDFILFANSFHDMDDKQHVISEVKRILK-D 104 (170)
T ss_dssp HTTEEEEEEECSCHHHHHHHHHHCTTSEEESSG----------GGSCTTCEEEEEEESCSTTCSCHHHHHHHHHHHEE-E
T ss_pred HhhcCeEEEEeCCHHHHHHHHHhCCCcEEEeCC----------CCCCCCceEEEEEccchhcccCHHHHHHHHHHhcC-C
Confidence 3445699999999999999998 4778877753 46788999999999999998 99999999999999 9
Q ss_pred CeEEEEEeCC
Q 035840 80 NGVIAAWTYT 89 (213)
Q Consensus 80 gG~l~~~~~~ 89 (213)
||.+++..+.
T Consensus 105 gG~l~~~~~~ 114 (170)
T 3i9f_A 105 DGRVIIIDWR 114 (170)
T ss_dssp EEEEEEEEEC
T ss_pred CCEEEEEEcC
Confidence 9999887655
No 43
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.20 E-value=1.2e-11 Score=96.23 Aligned_cols=78 Identities=24% Similarity=0.092 Sum_probs=67.0
Q ss_pred cccCCeEEEEeCCHHHHHHhhcCCCceEEecCCCCcchhhccCCCCCCceeeeeechhhccC---ChhHHHHHHHHHhcC
Q 035840 2 AKIYKNVIATDTSPKQLEFAIKLPNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWF---DLPQFYKQVKWVLKK 78 (213)
Q Consensus 2 a~~~~~V~gvD~S~~ml~~Ar~~~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~---d~~~~~~e~~rvLk~ 78 (213)
+....+|+|+|+|+.|++.|++..++.+..+++ ++++ ++++||+|++..++|++ ++..+++++.|+||
T Consensus 62 ~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~d~-------~~~~-~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~Lk- 132 (211)
T 3e23_A 62 LAAGFDVDATDGSPELAAEASRRLGRPVRTMLF-------HQLD-AIDAYDAVWAHACLLHVPRDELADVLKLIWRALK- 132 (211)
T ss_dssp HHTTCEEEEEESCHHHHHHHHHHHTSCCEECCG-------GGCC-CCSCEEEEEECSCGGGSCHHHHHHHHHHHHHHEE-
T ss_pred HHcCCeEEEECCCHHHHHHHHHhcCCceEEeee-------ccCC-CCCcEEEEEecCchhhcCHHHHHHHHHHHHHhcC-
Confidence 345679999999999999999865677777776 7777 78899999999999988 67799999999999
Q ss_pred CCeEEEEEeC
Q 035840 79 PNGVIAAWTY 88 (213)
Q Consensus 79 pgG~l~~~~~ 88 (213)
|||.+++...
T Consensus 133 pgG~l~~~~~ 142 (211)
T 3e23_A 133 PGGLFYASYK 142 (211)
T ss_dssp EEEEEEEEEE
T ss_pred CCcEEEEEEc
Confidence 9999987643
No 44
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.19 E-value=1.3e-11 Score=100.73 Aligned_cols=80 Identities=16% Similarity=0.122 Sum_probs=66.7
Q ss_pred cccCCeEEEEeCCHHHHHHhhcC----------CCceEEecCCCCcchhhccCC---CCCCceeeeeec-hhhccC-C--
Q 035840 2 AKIYKNVIATDTSPKQLEFAIKL----------PNIRYQLTPPTMSITELEQNV---ATQSSVDLVTIA-AALHWF-D-- 64 (213)
Q Consensus 2 a~~~~~V~gvD~S~~ml~~Ar~~----------~~v~~~~~~~~~~~~d~~~~~---~~~~sfDlV~~~-~~~hw~-d-- 64 (213)
++...+|+|+|+|+.|++.|++. .++.+..+++ .+++ +++++||+|++. .++|++ +
T Consensus 76 ~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~-------~~~~~~~~~~~~fD~V~~~g~~l~~~~~~~ 148 (293)
T 3thr_A 76 VEEGFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANW-------LTLDKDVPAGDGFDAVICLGNSFAHLPDSK 148 (293)
T ss_dssp HHTTCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCG-------GGHHHHSCCTTCEEEEEECTTCGGGSCCSS
T ss_pred HHCCCeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecCh-------hhCccccccCCCeEEEEEcChHHhhcCccc
Confidence 44566999999999999999752 4567777776 5555 788999999998 899888 8
Q ss_pred -----hhHHHHHHHHHhcCCCeEEEEEeCC
Q 035840 65 -----LPQFYKQVKWVLKKPNGVIAAWTYT 89 (213)
Q Consensus 65 -----~~~~~~e~~rvLk~pgG~l~~~~~~ 89 (213)
+..++++++|+|| |||.|++...+
T Consensus 149 ~~~~~~~~~l~~~~~~Lk-pgG~l~~~~~~ 177 (293)
T 3thr_A 149 GDQSEHRLALKNIASMVR-PGGLLVIDHRN 177 (293)
T ss_dssp SSSHHHHHHHHHHHHTEE-EEEEEEEEEEC
T ss_pred cCHHHHHHHHHHHHHHcC-CCeEEEEEeCC
Confidence 8999999999999 99999876543
No 45
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.19 E-value=2.4e-11 Score=96.92 Aligned_cols=76 Identities=24% Similarity=0.315 Sum_probs=66.9
Q ss_pred CCeEEEEeCCHHHHHHhhcC----CCceEEecCCCCcchhhccCCCCCCceeeeeechhhccC---ChhHHHHHHHHHhc
Q 035840 5 YKNVIATDTSPKQLEFAIKL----PNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWF---DLPQFYKQVKWVLK 77 (213)
Q Consensus 5 ~~~V~gvD~S~~ml~~Ar~~----~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~---d~~~~~~e~~rvLk 77 (213)
+.+|+|+|+|+.|++.|++. +++++..+++ +++++++++||+|++..++|++ ++..++.++.|+||
T Consensus 116 ~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~-------~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~Lk 188 (254)
T 1xtp_A 116 YATTDLLEPVKHMLEEAKRELAGMPVGKFILASM-------ETATLPPNTYDLIVIQWTAIYLTDADFVKFFKHCQQALT 188 (254)
T ss_dssp CSEEEEEESCHHHHHHHHHHTTTSSEEEEEESCG-------GGCCCCSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEE
T ss_pred cCEEEEEeCCHHHHHHHHHHhccCCceEEEEccH-------HHCCCCCCCeEEEEEcchhhhCCHHHHHHHHHHHHHhcC
Confidence 46799999999999999974 4678888877 7788888999999999999988 47899999999999
Q ss_pred CCCeEEEEEeC
Q 035840 78 KPNGVIAAWTY 88 (213)
Q Consensus 78 ~pgG~l~~~~~ 88 (213)
|||.|++...
T Consensus 189 -pgG~l~i~~~ 198 (254)
T 1xtp_A 189 -PNGYIFFKEN 198 (254)
T ss_dssp -EEEEEEEEEE
T ss_pred -CCeEEEEEec
Confidence 9999987764
No 46
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.19 E-value=2.7e-11 Score=94.69 Aligned_cols=84 Identities=17% Similarity=0.153 Sum_probs=69.0
Q ss_pred cccCCeEEEEeCCHHHHHHhhcCCCceEEecCCCCcchhhccCCCCCC-ceeeeeechhhccCChhHHHHHHHHHhcCCC
Q 035840 2 AKIYKNVIATDTSPKQLEFAIKLPNIRYQLTPPTMSITELEQNVATQS-SVDLVTIAAALHWFDLPQFYKQVKWVLKKPN 80 (213)
Q Consensus 2 a~~~~~V~gvD~S~~ml~~Ar~~~~v~~~~~~~~~~~~d~~~~~~~~~-sfDlV~~~~~~hw~d~~~~~~e~~rvLk~pg 80 (213)
+....+|+|+|+|+.|++.|++..++.+..+++ .++...++.++ +||+|++..++|+-|+..+++++.|+|| ||
T Consensus 71 ~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~----~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~l~~~~~~L~-pg 145 (227)
T 3e8s_A 71 ADRGIEAVGVDGDRTLVDAARAAGAGEVHLASY----AQLAEAKVPVGKDYDLICANFALLHQDIIELLSAMRTLLV-PG 145 (227)
T ss_dssp HTTTCEEEEEESCHHHHHHHHHTCSSCEEECCH----HHHHTTCSCCCCCEEEEEEESCCCSSCCHHHHHHHHHTEE-EE
T ss_pred HHCCCEEEEEcCCHHHHHHHHHhcccccchhhH----HhhcccccccCCCccEEEECchhhhhhHHHHHHHHHHHhC-CC
Confidence 455679999999999999999988888888877 22333354444 5999999999995599999999999999 99
Q ss_pred eEEEEEeCCC
Q 035840 81 GVIAAWTYTM 90 (213)
Q Consensus 81 G~l~~~~~~~ 90 (213)
|.|++.....
T Consensus 146 G~l~~~~~~~ 155 (227)
T 3e8s_A 146 GALVIQTLHP 155 (227)
T ss_dssp EEEEEEECCT
T ss_pred eEEEEEecCc
Confidence 9999877653
No 47
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.18 E-value=3.1e-11 Score=99.76 Aligned_cols=82 Identities=11% Similarity=0.113 Sum_probs=62.5
Q ss_pred cCCeEEEEeCCHHHHHHhhcC----C--------CceEEecCCCCcchhh--ccC--CCCCCceeeeeechhhccC----
Q 035840 4 IYKNVIATDTSPKQLEFAIKL----P--------NIRYQLTPPTMSITEL--EQN--VATQSSVDLVTIAAALHWF---- 63 (213)
Q Consensus 4 ~~~~V~gvD~S~~ml~~Ar~~----~--------~v~~~~~~~~~~~~d~--~~~--~~~~~sfDlV~~~~~~hw~---- 63 (213)
..++|+|+|+|+.||+.|+++ . +++|.++++. +|. +++ ++++++||+|+|..++||+
T Consensus 70 ~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~---~d~~~~~l~~~~~~~~FD~V~~~~~lhy~~~~~ 146 (302)
T 2vdw_A 70 EIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIR---SDTFVSSVREVFYFGKFNIIDWQFAIHYSFHPR 146 (302)
T ss_dssp TCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTT---SSSHHHHHHTTCCSSCEEEEEEESCGGGTCSTT
T ss_pred CCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcc---cchhhhhhhccccCCCeeEEEECchHHHhCCHH
Confidence 357999999999999999974 1 1456666541 111 111 3567899999999999985
Q ss_pred ChhHHHHHHHHHhcCCCeEEEEEeCC
Q 035840 64 DLPQFYKQVKWVLKKPNGVIAAWTYT 89 (213)
Q Consensus 64 d~~~~~~e~~rvLk~pgG~l~~~~~~ 89 (213)
+...++++++|+|| |||.|++...+
T Consensus 147 ~~~~~l~~~~r~Lk-pGG~~i~~~~~ 171 (302)
T 2vdw_A 147 HYATVMNNLSELTA-SGGKVLITTMD 171 (302)
T ss_dssp THHHHHHHHHHHEE-EEEEEEEEEEC
T ss_pred HHHHHHHHHHHHcC-CCCEEEEEeCC
Confidence 55899999999999 99999876554
No 48
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.18 E-value=2.6e-11 Score=95.05 Aligned_cols=80 Identities=20% Similarity=0.256 Sum_probs=67.7
Q ss_pred cccCCeEEEEeCCHHHHHHhhcC-----CCceEEecCCCCcchhhccCCCCCCceeeeeechh--hccC-ChhHHHHHHH
Q 035840 2 AKIYKNVIATDTSPKQLEFAIKL-----PNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAA--LHWF-DLPQFYKQVK 73 (213)
Q Consensus 2 a~~~~~V~gvD~S~~ml~~Ar~~-----~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~--~hw~-d~~~~~~e~~ 73 (213)
+..+.+|+|+|+|+.|++.|++. +++++..+++ .++++++++||+|++..+ +++. ++..+++++.
T Consensus 57 ~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~-------~~~~~~~~~~D~v~~~~~~~~~~~~~~~~~l~~~~ 129 (227)
T 1ve3_A 57 EDYGFEVVGVDISEDMIRKAREYAKSRESNVEFIVGDA-------RKLSFEDKTFDYVIFIDSIVHFEPLELNQVFKEVR 129 (227)
T ss_dssp HHTTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCT-------TSCCSCTTCEEEEEEESCGGGCCHHHHHHHHHHHH
T ss_pred HHcCCEEEEEECCHHHHHHHHHHHHhcCCCceEEECch-------hcCCCCCCcEEEEEEcCchHhCCHHHHHHHHHHHH
Confidence 34566999999999999999973 6788999887 677788889999999999 4555 7889999999
Q ss_pred HHhcCCCeEEEEEeCC
Q 035840 74 WVLKKPNGVIAAWTYT 89 (213)
Q Consensus 74 rvLk~pgG~l~~~~~~ 89 (213)
++|| |||.+++....
T Consensus 130 ~~L~-~gG~l~~~~~~ 144 (227)
T 1ve3_A 130 RVLK-PSGKFIMYFTD 144 (227)
T ss_dssp HHEE-EEEEEEEEEEC
T ss_pred HHcC-CCcEEEEEecC
Confidence 9999 99999876544
No 49
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.18 E-value=4.6e-11 Score=91.67 Aligned_cols=78 Identities=14% Similarity=0.160 Sum_probs=66.5
Q ss_pred cccCCeEEEEeCCHHHHHHhhcC------CCceEEecCCCCcchhhccCCCCCCceeeeeechhhccC---ChhHHHHHH
Q 035840 2 AKIYKNVIATDTSPKQLEFAIKL------PNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWF---DLPQFYKQV 72 (213)
Q Consensus 2 a~~~~~V~gvD~S~~ml~~Ar~~------~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~---d~~~~~~e~ 72 (213)
+....+|+|+|+|+.|++.|++. +++++..+++ .++++ +++||+|++..++|++ ++..+++++
T Consensus 51 ~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~-------~~~~~-~~~~D~v~~~~~l~~~~~~~~~~~l~~~ 122 (199)
T 2xvm_A 51 AANGYDVDAWDKNAMSIANVERIKSIENLDNLHTRVVDL-------NNLTF-DRQYDFILSTVVLMFLEAKTIPGLIANM 122 (199)
T ss_dssp HHTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCG-------GGCCC-CCCEEEEEEESCGGGSCGGGHHHHHHHH
T ss_pred HHCCCeEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcch-------hhCCC-CCCceEEEEcchhhhCCHHHHHHHHHHH
Confidence 34466999999999999999872 4788888877 77777 8899999999999988 578899999
Q ss_pred HHHhcCCCeEEEEEeC
Q 035840 73 KWVLKKPNGVIAAWTY 88 (213)
Q Consensus 73 ~rvLk~pgG~l~~~~~ 88 (213)
.++|| |||.+++...
T Consensus 123 ~~~L~-~gG~l~~~~~ 137 (199)
T 2xvm_A 123 QRCTK-PGGYNLIVAA 137 (199)
T ss_dssp HHTEE-EEEEEEEEEE
T ss_pred HHhcC-CCeEEEEEEe
Confidence 99999 9999876543
No 50
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.17 E-value=4e-11 Score=96.47 Aligned_cols=80 Identities=18% Similarity=0.177 Sum_probs=66.1
Q ss_pred cccCCeEEEEeCCHHHHHHhhcCCCceEEecCCCCcchhhccCCCCCCceeeeeech-hhccC-ChhHHHHHHHHHhcCC
Q 035840 2 AKIYKNVIATDTSPKQLEFAIKLPNIRYQLTPPTMSITELEQNVATQSSVDLVTIAA-ALHWF-DLPQFYKQVKWVLKKP 79 (213)
Q Consensus 2 a~~~~~V~gvD~S~~ml~~Ar~~~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~-~~hw~-d~~~~~~e~~rvLk~p 79 (213)
++...+|+|+|+|+.|++.|++.....+..+++ +++++++++||+|++.. ..||. ++..+++++.|+|| |
T Consensus 73 ~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~d~-------~~~~~~~~~fD~v~~~~~~~~~~~~~~~~l~~~~~~Lk-p 144 (260)
T 2avn_A 73 QERGFEVVLVDPSKEMLEVAREKGVKNVVEAKA-------EDLPFPSGAFEAVLALGDVLSYVENKDKAFSEIRRVLV-P 144 (260)
T ss_dssp HTTTCEEEEEESCHHHHHHHHHHTCSCEEECCT-------TSCCSCTTCEEEEEECSSHHHHCSCHHHHHHHHHHHEE-E
T ss_pred HHcCCeEEEEeCCHHHHHHHHhhcCCCEEECcH-------HHCCCCCCCEEEEEEcchhhhccccHHHHHHHHHHHcC-C
Confidence 445679999999999999999753223777777 77888899999999876 56786 89999999999999 9
Q ss_pred CeEEEEEeCC
Q 035840 80 NGVIAAWTYT 89 (213)
Q Consensus 80 gG~l~~~~~~ 89 (213)
||.+++...+
T Consensus 145 gG~l~~~~~~ 154 (260)
T 2avn_A 145 DGLLIATVDN 154 (260)
T ss_dssp EEEEEEEEEB
T ss_pred CeEEEEEeCC
Confidence 9999876544
No 51
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.16 E-value=3.8e-11 Score=93.94 Aligned_cols=74 Identities=20% Similarity=0.135 Sum_probs=63.2
Q ss_pred CeEEEEeCCHHHHHHhhcC-----------CCceEEecCCCCcchhhccCCCCCCceeeeeechhhccCC-h--hHHHHH
Q 035840 6 KNVIATDTSPKQLEFAIKL-----------PNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWFD-L--PQFYKQ 71 (213)
Q Consensus 6 ~~V~gvD~S~~ml~~Ar~~-----------~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~d-~--~~~~~e 71 (213)
.+|+|+|+|+.|++.|++. +++++..+++ +..+.++++||+|++..++++++ + ..++++
T Consensus 54 ~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~-------~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~l~~ 126 (219)
T 3jwg_A 54 EQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSL-------VYRDKRFSGYDAATVIEVIEHLDENRLQAFEKV 126 (219)
T ss_dssp CEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCS-------SSCCGGGTTCSEEEEESCGGGCCHHHHHHHHHH
T ss_pred CEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCcc-------cccccccCCCCEEEEHHHHHhCCHHHHHHHHHH
Confidence 6999999999999999973 1788999887 66777788999999999999994 3 589999
Q ss_pred HHHHhcCCCeEEEEEe
Q 035840 72 VKWVLKKPNGVIAAWT 87 (213)
Q Consensus 72 ~~rvLk~pgG~l~~~~ 87 (213)
+.|+|| |||.+++..
T Consensus 127 ~~~~Lk-pgG~~i~~~ 141 (219)
T 3jwg_A 127 LFEFTR-PQTVIVSTP 141 (219)
T ss_dssp HHTTTC-CSEEEEEEE
T ss_pred HHHhhC-CCEEEEEcc
Confidence 999999 999765443
No 52
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.16 E-value=2.2e-11 Score=99.56 Aligned_cols=76 Identities=13% Similarity=0.118 Sum_probs=59.9
Q ss_pred cCCeEEEEeCCHHHHHHhhcC-C-------------C----------------------ceEEecCCCCcchhhcc-CC-
Q 035840 4 IYKNVIATDTSPKQLEFAIKL-P-------------N----------------------IRYQLTPPTMSITELEQ-NV- 45 (213)
Q Consensus 4 ~~~~V~gvD~S~~ml~~Ar~~-~-------------~----------------------v~~~~~~~~~~~~d~~~-~~- 45 (213)
.+.+|+|+|+|+.|++.|+++ . + +++..+++ ++ +|
T Consensus 93 ~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~D~-------~~~~~~ 165 (289)
T 2g72_A 93 HFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLRARVKRVLPIDV-------HQPQPL 165 (289)
T ss_dssp GCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHHHHEEEEECCCT-------TSSSTT
T ss_pred CCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHHhhhceEEeccc-------CCCCCc
Confidence 367999999999999998862 0 0 22334455 44 44
Q ss_pred ----CCCCceeeeeechhhcc----C-ChhHHHHHHHHHhcCCCeEEEEEe
Q 035840 46 ----ATQSSVDLVTIAAALHW----F-DLPQFYKQVKWVLKKPNGVIAAWT 87 (213)
Q Consensus 46 ----~~~~sfDlV~~~~~~hw----~-d~~~~~~e~~rvLk~pgG~l~~~~ 87 (213)
+++++||+|++..++|| + |+..+++++.|+|| |||.|++..
T Consensus 166 ~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~Lk-pGG~l~~~~ 215 (289)
T 2g72_A 166 GAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLR-PGGHLLLIG 215 (289)
T ss_dssp CSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEE-EEEEEEEEE
T ss_pred cccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcC-CCCEEEEEE
Confidence 44577999999999999 6 78999999999999 999998764
No 53
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.15 E-value=5.7e-11 Score=93.99 Aligned_cols=79 Identities=19% Similarity=0.126 Sum_probs=66.9
Q ss_pred cccCCeEEEEeCCHHHHHHhhcC-------CCceEEecCCCCcchhhccCCCCCCceeeeeechhhccC---ChhHHHHH
Q 035840 2 AKIYKNVIATDTSPKQLEFAIKL-------PNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWF---DLPQFYKQ 71 (213)
Q Consensus 2 a~~~~~V~gvD~S~~ml~~Ar~~-------~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~---d~~~~~~e 71 (213)
+....+|+|+|+|+.|++.|++. .++++.++++ .+++ ++++||+|++..++|++ ++..++++
T Consensus 85 ~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~-------~~~~-~~~~fD~v~~~~~l~~~~~~~~~~~l~~ 156 (235)
T 3lcc_A 85 ASPERFVVGLDISESALAKANETYGSSPKAEYFSFVKEDV-------FTWR-PTELFDLIFDYVFFCAIEPEMRPAWAKS 156 (235)
T ss_dssp CBTTEEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCT-------TTCC-CSSCEEEEEEESSTTTSCGGGHHHHHHH
T ss_pred HhCCCeEEEEECCHHHHHHHHHHhhccCCCcceEEEECch-------hcCC-CCCCeeEEEEChhhhcCCHHHHHHHHHH
Confidence 45677999999999999999973 2478888887 6655 55689999999999988 67889999
Q ss_pred HHHHhcCCCeEEEEEeCC
Q 035840 72 VKWVLKKPNGVIAAWTYT 89 (213)
Q Consensus 72 ~~rvLk~pgG~l~~~~~~ 89 (213)
+.|+|| |||.|++..+.
T Consensus 157 ~~~~Lk-pgG~l~~~~~~ 173 (235)
T 3lcc_A 157 MYELLK-PDGELITLMYP 173 (235)
T ss_dssp HHHHEE-EEEEEEEEECC
T ss_pred HHHHCC-CCcEEEEEEec
Confidence 999999 99999887665
No 54
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.15 E-value=3.3e-11 Score=94.20 Aligned_cols=74 Identities=15% Similarity=0.105 Sum_probs=62.9
Q ss_pred CeEEEEeCCHHHHHHhhcC-----------CCceEEecCCCCcchhhccCCCCCCceeeeeechhhccC-Ch--hHHHHH
Q 035840 6 KNVIATDTSPKQLEFAIKL-----------PNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWF-DL--PQFYKQ 71 (213)
Q Consensus 6 ~~V~gvD~S~~ml~~Ar~~-----------~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~-d~--~~~~~e 71 (213)
.+|+|+|+|+.|++.|++. +++++..+++ ...+.++++||+|++..++|++ ++ ..++++
T Consensus 54 ~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~-------~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~ 126 (217)
T 3jwh_A 54 EQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGAL-------TYQDKRFHGYDAATVIEVIEHLDLSRLGAFERV 126 (217)
T ss_dssp SEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCT-------TSCCGGGCSCSEEEEESCGGGCCHHHHHHHHHH
T ss_pred CEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCc-------ccccccCCCcCEEeeHHHHHcCCHHHHHHHHHH
Confidence 5999999999999999873 1688888887 6666777899999999999999 33 689999
Q ss_pred HHHHhcCCCeEEEEEe
Q 035840 72 VKWVLKKPNGVIAAWT 87 (213)
Q Consensus 72 ~~rvLk~pgG~l~~~~ 87 (213)
+.|+|| |||.+++..
T Consensus 127 ~~~~Lk-pgG~li~~~ 141 (217)
T 3jwh_A 127 LFEFAQ-PKIVIVTTP 141 (217)
T ss_dssp HHTTTC-CSEEEEEEE
T ss_pred HHHHcC-CCEEEEEcc
Confidence 999999 999776543
No 55
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.15 E-value=7.3e-11 Score=93.77 Aligned_cols=77 Identities=22% Similarity=0.263 Sum_probs=65.3
Q ss_pred CCeEEEEeCCHHHHHHhhcC------CCceEEecCCCCcchhhccCCCCCCceeeeeechhhccC-C--hhHHHHHHHHH
Q 035840 5 YKNVIATDTSPKQLEFAIKL------PNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWF-D--LPQFYKQVKWV 75 (213)
Q Consensus 5 ~~~V~gvD~S~~ml~~Ar~~------~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~-d--~~~~~~e~~rv 75 (213)
..+|+|+|+|+.|++.|++. .++++..+++ .++++++++||+|++..++|++ + ...+++++.|+
T Consensus 102 ~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~-------~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~ 174 (241)
T 2ex4_A 102 FREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGL-------QDFTPEPDSYDVIWIQWVIGHLTDQHLAEFLRRCKGS 174 (241)
T ss_dssp CSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCG-------GGCCCCSSCEEEEEEESCGGGSCHHHHHHHHHHHHHH
T ss_pred CCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcCh-------hhcCCCCCCEEEEEEcchhhhCCHHHHHHHHHHHHHh
Confidence 45999999999999999973 1367778776 7788888899999999999998 5 34899999999
Q ss_pred hcCCCeEEEEEeCC
Q 035840 76 LKKPNGVIAAWTYT 89 (213)
Q Consensus 76 Lk~pgG~l~~~~~~ 89 (213)
|| |||.|++....
T Consensus 175 Lk-pgG~l~i~~~~ 187 (241)
T 2ex4_A 175 LR-PNGIIVIKDNM 187 (241)
T ss_dssp EE-EEEEEEEEEEE
T ss_pred cC-CCeEEEEEEcc
Confidence 99 99999886544
No 56
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.14 E-value=6e-11 Score=97.39 Aligned_cols=79 Identities=16% Similarity=0.075 Sum_probs=66.5
Q ss_pred cccCCeEEEEeCCHHHHHHhhcC---------CCceEEecCCCCcchhhccCCCCCCceeeeee-chhhccCC---hhHH
Q 035840 2 AKIYKNVIATDTSPKQLEFAIKL---------PNIRYQLTPPTMSITELEQNVATQSSVDLVTI-AAALHWFD---LPQF 68 (213)
Q Consensus 2 a~~~~~V~gvD~S~~ml~~Ar~~---------~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~-~~~~hw~d---~~~~ 68 (213)
+....+|+|+|+|+.|++.|++. .++++.++++ .++++ +++||+|++ ..++||++ ...+
T Consensus 101 ~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~-------~~~~~-~~~fD~v~~~~~~~~~~~~~~~~~~ 172 (299)
T 3g2m_A 101 LDLGWEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDM-------SAFAL-DKRFGTVVISSGSINELDEADRRGL 172 (299)
T ss_dssp HTTTCCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBT-------TBCCC-SCCEEEEEECHHHHTTSCHHHHHHH
T ss_pred HHcCCeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCch-------hcCCc-CCCcCEEEECCcccccCCHHHHHHH
Confidence 45567999999999999999973 4688999887 77776 788999985 57788886 5899
Q ss_pred HHHHHHHhcCCCeEEEEEeCC
Q 035840 69 YKQVKWVLKKPNGVIAAWTYT 89 (213)
Q Consensus 69 ~~e~~rvLk~pgG~l~~~~~~ 89 (213)
++++.|+|| |||.|++..+.
T Consensus 173 l~~~~~~L~-pgG~l~~~~~~ 192 (299)
T 3g2m_A 173 YASVREHLE-PGGKFLLSLAM 192 (299)
T ss_dssp HHHHHHHEE-EEEEEEEEEEC
T ss_pred HHHHHHHcC-CCcEEEEEeec
Confidence 999999999 99999877655
No 57
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.14 E-value=4.7e-11 Score=98.01 Aligned_cols=59 Identities=15% Similarity=0.323 Sum_probs=45.4
Q ss_pred CceEEecCCCCcchhhccCCCCCCceeeeeechhhccC-------ChhHHHHHHHHHhcCCCeEEEEEe
Q 035840 26 NIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWF-------DLPQFYKQVKWVLKKPNGVIAAWT 87 (213)
Q Consensus 26 ~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~-------d~~~~~~e~~rvLk~pgG~l~~~~ 87 (213)
+++|..++...... +..++.+++||+|++..+++|+ +..+++++++++|| |||.|++..
T Consensus 155 ~v~f~~~d~~~~~~--~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l~~~~~~Lk-pGG~lil~~ 220 (292)
T 3g07_A 155 NVVFVTGNYVLDRD--DLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMFRRIYRHLR-PGGILVLEP 220 (292)
T ss_dssp TEEEEECCCCCSSH--HHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHHHHHHHHHEE-EEEEEEEEC
T ss_pred cceEEecccccCcc--ccccccCCCcCEEEEChHHHHhhhcCCHHHHHHHHHHHHHHhC-CCcEEEEec
Confidence 67788877621000 1123578899999999999888 78899999999999 999998753
No 58
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.12 E-value=3.1e-11 Score=97.57 Aligned_cols=76 Identities=16% Similarity=0.145 Sum_probs=58.8
Q ss_pred CCeEEEEeCCHHHHHHhhcC----C-C------------------------------ce-EEecCCCCcchhhcc-CCC-
Q 035840 5 YKNVIATDTSPKQLEFAIKL----P-N------------------------------IR-YQLTPPTMSITELEQ-NVA- 46 (213)
Q Consensus 5 ~~~V~gvD~S~~ml~~Ar~~----~-~------------------------------v~-~~~~~~~~~~~d~~~-~~~- 46 (213)
+.+|+|+|+|+.|++.|++. + . +. +..+++ .+ .|+
T Consensus 78 ~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~D~-------~~~~~~~ 150 (263)
T 2a14_A 78 FQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKLRAAVKRVLKCDV-------HLGNPLA 150 (263)
T ss_dssp EEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHHHHHEEEEEECCT-------TSSSTTT
T ss_pred hcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHHHhhhheEEeccc-------cCCCCCC
Confidence 45899999999999998862 1 1 12 566665 33 343
Q ss_pred --CCCceeeeeechhhccC-----ChhHHHHHHHHHhcCCCeEEEEEeC
Q 035840 47 --TQSSVDLVTIAAALHWF-----DLPQFYKQVKWVLKKPNGVIAAWTY 88 (213)
Q Consensus 47 --~~~sfDlV~~~~~~hw~-----d~~~~~~e~~rvLk~pgG~l~~~~~ 88 (213)
.+++||+|++..++|++ |...++++++|+|| |||.|++...
T Consensus 151 ~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LK-PGG~li~~~~ 198 (263)
T 2a14_A 151 PAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLK-PGGHLVTTVT 198 (263)
T ss_dssp TCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEE-EEEEEEEEEE
T ss_pred ccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcC-CCcEEEEEEe
Confidence 36789999999999985 44689999999999 9999988753
No 59
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.11 E-value=7.2e-11 Score=91.57 Aligned_cols=77 Identities=23% Similarity=0.275 Sum_probs=66.5
Q ss_pred eEEEEeCCHHHHHHhhcC----CCceEEecCCCCcchhhccCCCCCCceeeeeechhhccC----------------Chh
Q 035840 7 NVIATDTSPKQLEFAIKL----PNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWF----------------DLP 66 (213)
Q Consensus 7 ~V~gvD~S~~ml~~Ar~~----~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~----------------d~~ 66 (213)
+|+|+|+|+.|++.|++. +++++..+++ .++++++++||+|++..+++.+ +..
T Consensus 67 ~v~~~D~s~~~~~~a~~~~~~~~~i~~~~~d~-------~~~~~~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (215)
T 2pxx_A 67 NVTSVDYSSVVVAAMQACYAHVPQLRWETMDV-------RKLDFPSASFDVVLEKGTLDALLAGERDPWTVSSEGVHTVD 139 (215)
T ss_dssp CEEEEESCHHHHHHHHHHTTTCTTCEEEECCT-------TSCCSCSSCEEEEEEESHHHHHTTTCSCTTSCCHHHHHHHH
T ss_pred cEEEEeCCHHHHHHHHHhcccCCCcEEEEcch-------hcCCCCCCcccEEEECcchhhhccccccccccccchhHHHH
Confidence 899999999999999973 5788888887 6778888999999998887533 458
Q ss_pred HHHHHHHHHhcCCCeEEEEEeCCCC
Q 035840 67 QFYKQVKWVLKKPNGVIAAWTYTMP 91 (213)
Q Consensus 67 ~~~~e~~rvLk~pgG~l~~~~~~~~ 91 (213)
.++.++.|+|| |||.+++..+..+
T Consensus 140 ~~l~~~~~~Lk-pgG~li~~~~~~~ 163 (215)
T 2pxx_A 140 QVLSEVSRVLV-PGGRFISMTSAAP 163 (215)
T ss_dssp HHHHHHHHHEE-EEEEEEEEESCCH
T ss_pred HHHHHHHHhCc-CCCEEEEEeCCCc
Confidence 99999999999 9999999887754
No 60
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.11 E-value=1.9e-10 Score=90.10 Aligned_cols=72 Identities=18% Similarity=0.190 Sum_probs=65.5
Q ss_pred EEEeCCHHHHHHhhcCCCceEEecCCCCcchhhccCCCCCCceeeeeechhhccC-ChhHHHHHHHHHhcCCCeEEEEEe
Q 035840 9 IATDTSPKQLEFAIKLPNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWF-DLPQFYKQVKWVLKKPNGVIAAWT 87 (213)
Q Consensus 9 ~gvD~S~~ml~~Ar~~~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~-d~~~~~~e~~rvLk~pgG~l~~~~ 87 (213)
+|+|+|+.|++.|++. ++++..+++ +++++++++||+|++..++|++ |+..+++++.++|| |||.+++..
T Consensus 69 ~~vD~s~~~~~~a~~~-~~~~~~~d~-------~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~-pgG~l~i~~ 139 (219)
T 1vlm_A 69 IGVEPSERMAEIARKR-GVFVLKGTA-------ENLPLKDESFDFALMVTTICFVDDPERALKEAYRILK-KGGYLIVGI 139 (219)
T ss_dssp EEEESCHHHHHHHHHT-TCEEEECBT-------TBCCSCTTCEEEEEEESCGGGSSCHHHHHHHHHHHEE-EEEEEEEEE
T ss_pred hccCCCHHHHHHHHhc-CCEEEEccc-------ccCCCCCCCeeEEEEcchHhhccCHHHHHHHHHHHcC-CCcEEEEEE
Confidence 9999999999999987 788888877 7778888999999999999999 99999999999999 999998765
Q ss_pred CC
Q 035840 88 YT 89 (213)
Q Consensus 88 ~~ 89 (213)
..
T Consensus 140 ~~ 141 (219)
T 1vlm_A 140 VD 141 (219)
T ss_dssp EC
T ss_pred eC
Confidence 54
No 61
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.09 E-value=2.4e-10 Score=93.09 Aligned_cols=85 Identities=15% Similarity=0.142 Sum_probs=65.0
Q ss_pred CCeEEEEeCCHHHHHHhhcC----CCceEEecCCCCcchhhcc----CCCCCCceeeeeechhhccC-C--hhHHHHHHH
Q 035840 5 YKNVIATDTSPKQLEFAIKL----PNIRYQLTPPTMSITELEQ----NVATQSSVDLVTIAAALHWF-D--LPQFYKQVK 73 (213)
Q Consensus 5 ~~~V~gvD~S~~ml~~Ar~~----~~v~~~~~~~~~~~~d~~~----~~~~~~sfDlV~~~~~~hw~-d--~~~~~~e~~ 73 (213)
..+|+|+|+||.|++.||++ ++++|+.+++.....-+.. -.++..+||+|++..++||+ | +..++++++
T Consensus 104 ~~~v~~vD~sp~~l~~Ar~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~d~~~~d~v~~~~vlh~~~d~~~~~~l~~~~ 183 (274)
T 2qe6_A 104 DARVVYVDIDPMVLTHGRALLAKDPNTAVFTADVRDPEYILNHPDVRRMIDFSRPAAIMLVGMLHYLSPDVVDRVVGAYR 183 (274)
T ss_dssp TCEEEEEESSHHHHHHHHHHHTTCTTEEEEECCTTCHHHHHHSHHHHHHCCTTSCCEEEETTTGGGSCTTTHHHHHHHHH
T ss_pred CCEEEEEECChHHHHHHHHhcCCCCCeEEEEeeCCCchhhhccchhhccCCCCCCEEEEEechhhhCCcHHHHHHHHHHH
Confidence 36999999999999999973 5788999887321000000 01333589999999999999 5 789999999
Q ss_pred HHhcCCCeEEEEEeCCC
Q 035840 74 WVLKKPNGVIAAWTYTM 90 (213)
Q Consensus 74 rvLk~pgG~l~~~~~~~ 90 (213)
|+|| |||.|++.....
T Consensus 184 ~~L~-pGG~l~i~~~~~ 199 (274)
T 2qe6_A 184 DALA-PGSYLFMTSLVD 199 (274)
T ss_dssp HHSC-TTCEEEEEEEBC
T ss_pred HhCC-CCcEEEEEEecC
Confidence 9999 999998876553
No 62
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.08 E-value=9.3e-11 Score=95.59 Aligned_cols=76 Identities=11% Similarity=0.104 Sum_probs=65.0
Q ss_pred CeEEEEeCCHHHHHHhhcC-------CCceEEecCCCCcchhhccCCC-CCCceeeeeechhhcc----C-ChhHHHHHH
Q 035840 6 KNVIATDTSPKQLEFAIKL-------PNIRYQLTPPTMSITELEQNVA-TQSSVDLVTIAAALHW----F-DLPQFYKQV 72 (213)
Q Consensus 6 ~~V~gvD~S~~ml~~Ar~~-------~~v~~~~~~~~~~~~d~~~~~~-~~~sfDlV~~~~~~hw----~-d~~~~~~e~ 72 (213)
.+|+|+|+|+.|++.|++. .++++.++++ .+.++ ++++||+|++..++|+ . ++..+++++
T Consensus 88 ~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~-------~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~ 160 (298)
T 1ri5_A 88 GEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDS-------YGRHMDLGKEFDVISSQFSFHYAFSTSESLDIAQRNI 160 (298)
T ss_dssp SEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCT-------TTSCCCCSSCEEEEEEESCGGGGGSSHHHHHHHHHHH
T ss_pred CEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCc-------cccccCCCCCcCEEEECchhhhhcCCHHHHHHHHHHH
Confidence 4899999999999999973 2478888887 66677 6889999999999988 2 678999999
Q ss_pred HHHhcCCCeEEEEEeCC
Q 035840 73 KWVLKKPNGVIAAWTYT 89 (213)
Q Consensus 73 ~rvLk~pgG~l~~~~~~ 89 (213)
.|+|| |||.|++....
T Consensus 161 ~~~Lk-pgG~l~~~~~~ 176 (298)
T 1ri5_A 161 ARHLR-PGGYFIMTVPS 176 (298)
T ss_dssp HHTEE-EEEEEEEEEEC
T ss_pred HHhcC-CCCEEEEEECC
Confidence 99999 99999877644
No 63
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.08 E-value=1.1e-10 Score=92.48 Aligned_cols=79 Identities=24% Similarity=0.231 Sum_probs=65.9
Q ss_pred cccCCeEEEEeCCHHHHHHhhcC-----CCceEEecCCCCcchhhccCCCCCCceeeeeech-hhccC----ChhHHHHH
Q 035840 2 AKIYKNVIATDTSPKQLEFAIKL-----PNIRYQLTPPTMSITELEQNVATQSSVDLVTIAA-ALHWF----DLPQFYKQ 71 (213)
Q Consensus 2 a~~~~~V~gvD~S~~ml~~Ar~~-----~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~-~~hw~----d~~~~~~e 71 (213)
+....+|+|+|+|+.|++.|++. .++++..+++ .+++++ ++||+|++.. ++|++ ++..++++
T Consensus 56 ~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~d~-------~~~~~~-~~fD~v~~~~~~l~~~~~~~~~~~~l~~ 127 (246)
T 1y8c_A 56 CPKFKNTWAVDLSQEMLSEAENKFRSQGLKPRLACQDI-------SNLNIN-RKFDLITCCLDSTNYIIDSDDLKKYFKA 127 (246)
T ss_dssp GGGSSEEEEECSCHHHHHHHHHHHHHTTCCCEEECCCG-------GGCCCS-CCEEEEEECTTGGGGCCSHHHHHHHHHH
T ss_pred HHCCCcEEEEECCHHHHHHHHHHHhhcCCCeEEEeccc-------ccCCcc-CCceEEEEcCccccccCCHHHHHHHHHH
Confidence 45567999999999999999973 2678888776 777776 7899999998 99887 56789999
Q ss_pred HHHHhcCCCeEEEEEeCC
Q 035840 72 VKWVLKKPNGVIAAWTYT 89 (213)
Q Consensus 72 ~~rvLk~pgG~l~~~~~~ 89 (213)
+.|+|| |||.+++....
T Consensus 128 ~~~~L~-pgG~l~~~~~~ 144 (246)
T 1y8c_A 128 VSNHLK-EGGVFIFDINS 144 (246)
T ss_dssp HHTTEE-EEEEEEEEEEC
T ss_pred HHHhcC-CCcEEEEEecC
Confidence 999999 99999875443
No 64
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.07 E-value=1.5e-10 Score=91.31 Aligned_cols=79 Identities=15% Similarity=0.155 Sum_probs=65.1
Q ss_pred cccCCeEEEEeCCHHHHHHhhcC-CCceEEecCCCCcchhhccCCCCCCceeeeee-chhhccC----ChhHHHHHHHHH
Q 035840 2 AKIYKNVIATDTSPKQLEFAIKL-PNIRYQLTPPTMSITELEQNVATQSSVDLVTI-AAALHWF----DLPQFYKQVKWV 75 (213)
Q Consensus 2 a~~~~~V~gvD~S~~ml~~Ar~~-~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~-~~~~hw~----d~~~~~~e~~rv 75 (213)
++.+.+|+|+|+|+.|++.|++. +++++..+++ .++++ +++||+|++ ..++|++ +...+++++.++
T Consensus 59 ~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~d~-------~~~~~-~~~~D~v~~~~~~~~~~~~~~~~~~~l~~~~~~ 130 (239)
T 3bxo_A 59 TKEFGDTAGLELSEDMLTHARKRLPDATLHQGDM-------RDFRL-GRKFSAVVSMFSSVGYLKTTEELGAAVASFAEH 130 (239)
T ss_dssp HHHHSEEEEEESCHHHHHHHHHHCTTCEEEECCT-------TTCCC-SSCEEEEEECTTGGGGCCSHHHHHHHHHHHHHT
T ss_pred HHhCCcEEEEeCCHHHHHHHHHhCCCCEEEECCH-------HHccc-CCCCcEEEEcCchHhhcCCHHHHHHHHHHHHHh
Confidence 34456899999999999999984 6789999887 66666 778999995 5588887 346899999999
Q ss_pred hcCCCeEEEEEeCC
Q 035840 76 LKKPNGVIAAWTYT 89 (213)
Q Consensus 76 Lk~pgG~l~~~~~~ 89 (213)
|| |||.+++..+.
T Consensus 131 L~-pgG~l~~~~~~ 143 (239)
T 3bxo_A 131 LE-PGGVVVVEPWW 143 (239)
T ss_dssp EE-EEEEEEECCCC
T ss_pred cC-CCeEEEEEecc
Confidence 99 99999876544
No 65
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.07 E-value=1.5e-10 Score=95.11 Aligned_cols=76 Identities=22% Similarity=0.246 Sum_probs=65.0
Q ss_pred CCeEEEEeCCHHHHHHhhcC-------CCceEEecCCCCcchhhccCCCCCCceeeeeechhhccC-Ch---------hH
Q 035840 5 YKNVIATDTSPKQLEFAIKL-------PNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWF-DL---------PQ 67 (213)
Q Consensus 5 ~~~V~gvD~S~~ml~~Ar~~-------~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~-d~---------~~ 67 (213)
..+|+|+|+|+.|++.|++. .++++..+++ .++ +++||+|++..++|++ |+ ..
T Consensus 95 ~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~-------~~~---~~~fD~v~~~~~~~~~~d~~~~~~~~~~~~ 164 (302)
T 3hem_A 95 DVNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGW-------EEF---DEPVDRIVSLGAFEHFADGAGDAGFERYDT 164 (302)
T ss_dssp CCEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCG-------GGC---CCCCSEEEEESCGGGTTCCSSCCCTTHHHH
T ss_pred CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCH-------HHc---CCCccEEEEcchHHhcCccccccchhHHHH
Confidence 57899999999999999973 2688888877 554 7889999999999988 66 69
Q ss_pred HHHHHHHHhcCCCeEEEEEeCCCC
Q 035840 68 FYKQVKWVLKKPNGVIAAWTYTMP 91 (213)
Q Consensus 68 ~~~e~~rvLk~pgG~l~~~~~~~~ 91 (213)
+++++.|+|| |||.+++.....+
T Consensus 165 ~l~~~~~~Lk-pgG~l~i~~~~~~ 187 (302)
T 3hem_A 165 FFKKFYNLTP-DDGRMLLHTITIP 187 (302)
T ss_dssp HHHHHHHSSC-TTCEEEEEEEECC
T ss_pred HHHHHHHhcC-CCcEEEEEEEecc
Confidence 9999999999 9999998766543
No 66
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.07 E-value=2.7e-10 Score=89.09 Aligned_cols=77 Identities=23% Similarity=0.112 Sum_probs=65.9
Q ss_pred cCCeEEEEeCCHHHHHHhhcCCCceEEecCCCCcchhhcc--CCCCCCceeeeeechhhccC-ChhHHHHHHHHHhcCCC
Q 035840 4 IYKNVIATDTSPKQLEFAIKLPNIRYQLTPPTMSITELEQ--NVATQSSVDLVTIAAALHWF-DLPQFYKQVKWVLKKPN 80 (213)
Q Consensus 4 ~~~~V~gvD~S~~ml~~Ar~~~~v~~~~~~~~~~~~d~~~--~~~~~~sfDlV~~~~~~hw~-d~~~~~~e~~rvLk~pg 80 (213)
...+|+|+|+|+.|++.|++.. .++..+++ ++ .++++++||+|++..++|++ |+..++.++.++|| ||
T Consensus 53 ~~~~~~~~D~~~~~~~~~~~~~-~~~~~~d~-------~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~-~g 123 (230)
T 3cc8_A 53 NGTRVSGIEAFPEAAEQAKEKL-DHVVLGDI-------ETMDMPYEEEQFDCVIFGDVLEHLFDPWAVIEKVKPYIK-QN 123 (230)
T ss_dssp TTCEEEEEESSHHHHHHHHTTS-SEEEESCT-------TTCCCCSCTTCEEEEEEESCGGGSSCHHHHHHHTGGGEE-EE
T ss_pred cCCeEEEEeCCHHHHHHHHHhC-CcEEEcch-------hhcCCCCCCCccCEEEECChhhhcCCHHHHHHHHHHHcC-CC
Confidence 3579999999999999999763 36777777 44 56788999999999999988 99999999999999 99
Q ss_pred eEEEEEeCC
Q 035840 81 GVIAAWTYT 89 (213)
Q Consensus 81 G~l~~~~~~ 89 (213)
|.+++....
T Consensus 124 G~l~~~~~~ 132 (230)
T 3cc8_A 124 GVILASIPN 132 (230)
T ss_dssp EEEEEEEEC
T ss_pred CEEEEEeCC
Confidence 999876544
No 67
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.07 E-value=2.7e-10 Score=93.85 Aligned_cols=78 Identities=22% Similarity=0.248 Sum_probs=66.8
Q ss_pred CCeEEEEeCCHHHHHHhhcC-------CCceEEecCCCCcchhhccCCCCCCceeeeeechhhccC-ChhH---HHHHHH
Q 035840 5 YKNVIATDTSPKQLEFAIKL-------PNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWF-DLPQ---FYKQVK 73 (213)
Q Consensus 5 ~~~V~gvD~S~~ml~~Ar~~-------~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~-d~~~---~~~e~~ 73 (213)
..+|+|+|+|+.|++.|++. .++++.++++ .+++++ ++||+|++..++|++ |+.. +++++.
T Consensus 143 ~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~-------~~~~~~-~~fD~v~~~~~~~~~~~~~~~~~~l~~~~ 214 (305)
T 3ocj_A 143 GVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDA-------WKLDTR-EGYDLLTSNGLNIYEPDDARVTELYRRFW 214 (305)
T ss_dssp TCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCG-------GGCCCC-SCEEEEECCSSGGGCCCHHHHHHHHHHHH
T ss_pred CCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECch-------hcCCcc-CCeEEEEECChhhhcCCHHHHHHHHHHHH
Confidence 45999999999999999973 1378888887 778877 899999999999988 7876 699999
Q ss_pred HHhcCCCeEEEEEeCCCC
Q 035840 74 WVLKKPNGVIAAWTYTMP 91 (213)
Q Consensus 74 rvLk~pgG~l~~~~~~~~ 91 (213)
|+|| |||.|++.++..+
T Consensus 215 ~~Lk-pgG~l~i~~~~~~ 231 (305)
T 3ocj_A 215 QALK-PGGALVTSFLTPP 231 (305)
T ss_dssp HHEE-EEEEEEEECCCCC
T ss_pred HhcC-CCeEEEEEecCCC
Confidence 9999 9999998776543
No 68
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.07 E-value=3.3e-10 Score=92.31 Aligned_cols=71 Identities=20% Similarity=0.273 Sum_probs=58.1
Q ss_pred eEEEEeCCHHHHHHhhcC-------------------------------------CCceEEecCCCCcchhhccCCCC-C
Q 035840 7 NVIATDTSPKQLEFAIKL-------------------------------------PNIRYQLTPPTMSITELEQNVAT-Q 48 (213)
Q Consensus 7 ~V~gvD~S~~ml~~Ar~~-------------------------------------~~v~~~~~~~~~~~~d~~~~~~~-~ 48 (213)
+|+|+|+|+.||+.|++. .+|.|..++. .+.|++ +
T Consensus 139 ~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~~~~v~~~lr~~V~F~~~dl-------~~~~~~~~ 211 (274)
T 1af7_A 139 KVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEGLVRVRQELANYVEFSSVNL-------LEKQYNVP 211 (274)
T ss_dssp EEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCSEEEECHHHHTTEEEEECCT-------TCSSCCCC
T ss_pred EEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCCceeechhhcccCeEEeccc-------CCCCCCcC
Confidence 899999999999999973 1355666555 555554 5
Q ss_pred CceeeeeechhhccCCh---hHHHHHHHHHhcCCCeEEEE
Q 035840 49 SSVDLVTIAAALHWFDL---PQFYKQVKWVLKKPNGVIAA 85 (213)
Q Consensus 49 ~sfDlV~~~~~~hw~d~---~~~~~e~~rvLk~pgG~l~~ 85 (213)
++||+|+|..+++++++ .+++++++++|| |||.|++
T Consensus 212 ~~fDlI~crnvliyf~~~~~~~vl~~~~~~L~-pgG~L~l 250 (274)
T 1af7_A 212 GPFDAIFCRNVMIYFDKTTQEDILRRFVPLLK-PDGLLFA 250 (274)
T ss_dssp CCEEEEEECSSGGGSCHHHHHHHHHHHGGGEE-EEEEEEE
T ss_pred CCeeEEEECCchHhCCHHHHHHHHHHHHHHhC-CCcEEEE
Confidence 78999999999999955 589999999999 9999965
No 69
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.06 E-value=2.7e-10 Score=86.72 Aligned_cols=80 Identities=16% Similarity=0.081 Sum_probs=59.9
Q ss_pred cccCCeEEEEeCCHHHHHHhhcC------CCceEEecCCCCcchhhccCC-CCCCceeeeeechhh-cc---------CC
Q 035840 2 AKIYKNVIATDTSPKQLEFAIKL------PNIRYQLTPPTMSITELEQNV-ATQSSVDLVTIAAAL-HW---------FD 64 (213)
Q Consensus 2 a~~~~~V~gvD~S~~ml~~Ar~~------~~v~~~~~~~~~~~~d~~~~~-~~~~sfDlV~~~~~~-hw---------~d 64 (213)
|+...+|+|+|+|+.|++.|++. +++++..++. +.++ +.+++||+|++...+ +. -+
T Consensus 41 a~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~-------~~l~~~~~~~fD~v~~~~~~~~~~~~~~~~~~~~ 113 (185)
T 3mti_A 41 AGLSKKVYAFDVQEQALGKTSQRLSDLGIENTELILDGH-------ENLDHYVREPIRAAIFNLGYLPSADKSVITKPHT 113 (185)
T ss_dssp HTTSSEEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCG-------GGGGGTCCSCEEEEEEEEC-----------CHHH
T ss_pred HHhCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcH-------HHHHhhccCCcCEEEEeCCCCCCcchhcccChhh
Confidence 45578999999999999999973 5788888665 4432 347789999877322 22 14
Q ss_pred hhHHHHHHHHHhcCCCeEEEEEeCC
Q 035840 65 LPQFYKQVKWVLKKPNGVIAAWTYT 89 (213)
Q Consensus 65 ~~~~~~e~~rvLk~pgG~l~~~~~~ 89 (213)
...+++++.|+|| |||.+++..+.
T Consensus 114 ~~~~l~~~~~~Lk-pgG~l~i~~~~ 137 (185)
T 3mti_A 114 TLEAIEKILDRLE-VGGRLAIMIYY 137 (185)
T ss_dssp HHHHHHHHHHHEE-EEEEEEEEEC-
T ss_pred HHHHHHHHHHhcC-CCcEEEEEEeC
Confidence 4578899999999 99999887664
No 70
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.06 E-value=1.2e-10 Score=89.81 Aligned_cols=80 Identities=23% Similarity=0.112 Sum_probs=65.4
Q ss_pred cccCCeEEEEeCCHHHHHHhhcC-----CCceEEecCCCCcchhhccCCCCCCceeeeeechhhccC--ChhHHHHHHHH
Q 035840 2 AKIYKNVIATDTSPKQLEFAIKL-----PNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWF--DLPQFYKQVKW 74 (213)
Q Consensus 2 a~~~~~V~gvD~S~~ml~~Ar~~-----~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~--d~~~~~~e~~r 74 (213)
+....+|+|+|+|+.|++.|++. .++++..+++ .+.++++++||+|++.. .|+- +...++.++.+
T Consensus 48 ~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~-------~~~~~~~~~fD~v~~~~-~~~~~~~~~~~l~~~~~ 119 (202)
T 2kw5_A 48 ASLGYEVTAVDQSSVGLAKAKQLAQEKGVKITTVQSNL-------ADFDIVADAWEGIVSIF-CHLPSSLRQQLYPKVYQ 119 (202)
T ss_dssp HTTTCEEEEECSSHHHHHHHHHHHHHHTCCEEEECCBT-------TTBSCCTTTCSEEEEEC-CCCCHHHHHHHHHHHHT
T ss_pred HhCCCeEEEEECCHHHHHHHHHHHHhcCCceEEEEcCh-------hhcCCCcCCccEEEEEh-hcCCHHHHHHHHHHHHH
Confidence 44567999999999999999974 3678888777 67778889999999864 3443 77899999999
Q ss_pred HhcCCCeEEEEEeCCC
Q 035840 75 VLKKPNGVIAAWTYTM 90 (213)
Q Consensus 75 vLk~pgG~l~~~~~~~ 90 (213)
+|| |||.+++..+..
T Consensus 120 ~L~-pgG~l~~~~~~~ 134 (202)
T 2kw5_A 120 GLK-PGGVFILEGFAP 134 (202)
T ss_dssp TCC-SSEEEEEEEECT
T ss_pred hcC-CCcEEEEEEecc
Confidence 999 999998876653
No 71
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.06 E-value=2.4e-10 Score=91.56 Aligned_cols=79 Identities=16% Similarity=0.084 Sum_probs=63.5
Q ss_pred cccCC-eEEEEeCCHHHHHHhhcC---CC--------------------------------c-eEEecCCCCcchhhccC
Q 035840 2 AKIYK-NVIATDTSPKQLEFAIKL---PN--------------------------------I-RYQLTPPTMSITELEQN 44 (213)
Q Consensus 2 a~~~~-~V~gvD~S~~ml~~Ar~~---~~--------------------------------v-~~~~~~~~~~~~d~~~~ 44 (213)
+..+. +|+|+|+|+.|++.|++. .+ + .+..+++ .+.
T Consensus 75 ~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~d~-------~~~ 147 (265)
T 2i62_A 75 ACESFTEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLRRAIKQVLKCDV-------TQS 147 (265)
T ss_dssp GGGTEEEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHHHHEEEEEECCT-------TSS
T ss_pred hhcccCeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHhhhhheeEEEeee-------ccC
Confidence 44444 999999999999999863 22 6 7888877 443
Q ss_pred -CCCC---Cceeeeeechhhc----cC-ChhHHHHHHHHHhcCCCeEEEEEeC
Q 035840 45 -VATQ---SSVDLVTIAAALH----WF-DLPQFYKQVKWVLKKPNGVIAAWTY 88 (213)
Q Consensus 45 -~~~~---~sfDlV~~~~~~h----w~-d~~~~~~e~~rvLk~pgG~l~~~~~ 88 (213)
++++ ++||+|++..++| +. ++..+++++.|+|| |||.|++...
T Consensus 148 ~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~Lk-pgG~li~~~~ 199 (265)
T 2i62_A 148 QPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLK-PGGFLVMVDA 199 (265)
T ss_dssp STTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEE-EEEEEEEEEE
T ss_pred CCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCC-CCcEEEEEec
Confidence 3355 8999999999999 55 78899999999999 9999987653
No 72
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.06 E-value=7.6e-11 Score=93.77 Aligned_cols=82 Identities=18% Similarity=0.213 Sum_probs=66.0
Q ss_pred cccCCeEEEEeCCHHHHHHhhcC---CCceEEecCCCCcchhhccCCCC-----CCceeeeeechhhccCC---hhHHHH
Q 035840 2 AKIYKNVIATDTSPKQLEFAIKL---PNIRYQLTPPTMSITELEQNVAT-----QSSVDLVTIAAALHWFD---LPQFYK 70 (213)
Q Consensus 2 a~~~~~V~gvD~S~~ml~~Ar~~---~~v~~~~~~~~~~~~d~~~~~~~-----~~sfDlV~~~~~~hw~d---~~~~~~ 70 (213)
++.+.+|+|+|+|+.|++.|++. .++++.++++ .+.+.. ..+||+|++..++|+++ ...+++
T Consensus 75 a~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~d~-------~~~~~~~~~~~~~~~d~v~~~~~~~~~~~~~~~~~l~ 147 (245)
T 3ggd_A 75 SQFFPRVIGLDVSKSALEIAAKENTAANISYRLLDG-------LVPEQAAQIHSEIGDANIYMRTGFHHIPVEKRELLGQ 147 (245)
T ss_dssp HHHSSCEEEEESCHHHHHHHHHHSCCTTEEEEECCT-------TCHHHHHHHHHHHCSCEEEEESSSTTSCGGGHHHHHH
T ss_pred HHhCCCEEEEECCHHHHHHHHHhCcccCceEEECcc-------cccccccccccccCccEEEEcchhhcCCHHHHHHHHH
Confidence 45567999999999999999873 4788999887 333221 13499999999999994 569999
Q ss_pred HHHHHhcCCCeEEEEEeCCCC
Q 035840 71 QVKWVLKKPNGVIAAWTYTMP 91 (213)
Q Consensus 71 e~~rvLk~pgG~l~~~~~~~~ 91 (213)
++.|+|| |||.+++..+..+
T Consensus 148 ~~~~~Lk-pgG~l~i~~~~~~ 167 (245)
T 3ggd_A 148 SLRILLG-KQGAMYLIELGTG 167 (245)
T ss_dssp HHHHHHT-TTCEEEEEEECTT
T ss_pred HHHHHcC-CCCEEEEEeCCcc
Confidence 9999999 9999988776643
No 73
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.06 E-value=2.7e-10 Score=92.70 Aligned_cols=74 Identities=26% Similarity=0.266 Sum_probs=63.7
Q ss_pred CCeEEEEeCCHHHHHHhhcC-------CCceEEecCCCCcchhhccCCCCCCceeeeeechhhccC---ChhHHHHHHHH
Q 035840 5 YKNVIATDTSPKQLEFAIKL-------PNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWF---DLPQFYKQVKW 74 (213)
Q Consensus 5 ~~~V~gvD~S~~ml~~Ar~~-------~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~---d~~~~~~e~~r 74 (213)
..+|+|+|+|+.|++.|++. +++++..+++ +++| ++||+|++..++|++ ++..+++++.|
T Consensus 87 ~~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~-------~~~~---~~fD~v~~~~~l~~~~~~~~~~~l~~~~~ 156 (287)
T 1kpg_A 87 DVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGW-------EQFD---EPVDRIVSIGAFEHFGHERYDAFFSLAHR 156 (287)
T ss_dssp CCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCG-------GGCC---CCCSEEEEESCGGGTCTTTHHHHHHHHHH
T ss_pred CCEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECCh-------hhCC---CCeeEEEEeCchhhcChHHHHHHHHHHHH
Confidence 45999999999999999873 4688888877 6654 789999999999887 67899999999
Q ss_pred HhcCCCeEEEEEeCC
Q 035840 75 VLKKPNGVIAAWTYT 89 (213)
Q Consensus 75 vLk~pgG~l~~~~~~ 89 (213)
+|| |||.+++....
T Consensus 157 ~Lk-pgG~l~~~~~~ 170 (287)
T 1kpg_A 157 LLP-ADGVMLLHTIT 170 (287)
T ss_dssp HSC-TTCEEEEEEEE
T ss_pred hcC-CCCEEEEEEec
Confidence 999 99999877654
No 74
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.05 E-value=4.5e-10 Score=85.51 Aligned_cols=79 Identities=16% Similarity=0.245 Sum_probs=66.7
Q ss_pred ccCCeEEEEeCCHHHHHHhhcC-CCceEEecCCCCcchhhccCCCCCCceeeeeec-hhhccC---ChhHHHHHHHHHhc
Q 035840 3 KIYKNVIATDTSPKQLEFAIKL-PNIRYQLTPPTMSITELEQNVATQSSVDLVTIA-AALHWF---DLPQFYKQVKWVLK 77 (213)
Q Consensus 3 ~~~~~V~gvD~S~~ml~~Ar~~-~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~-~~~hw~---d~~~~~~e~~rvLk 77 (213)
....+|+|+|+|+.|++.|++. +++++..+++ .+.++++++||+|++. ..+|++ +...++.++.++||
T Consensus 66 ~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~d~-------~~~~~~~~~~D~i~~~~~~~~~~~~~~~~~~l~~~~~~l~ 138 (195)
T 3cgg_A 66 KQGHDVLGTDLDPILIDYAKQDFPEARWVVGDL-------SVDQISETDFDLIVSAGNVMGFLAEDGREPALANIHRALG 138 (195)
T ss_dssp HTTCEEEEEESCHHHHHHHHHHCTTSEEEECCT-------TTSCCCCCCEEEEEECCCCGGGSCHHHHHHHHHHHHHHEE
T ss_pred HCCCcEEEEcCCHHHHHHHHHhCCCCcEEEccc-------ccCCCCCCceeEEEECCcHHhhcChHHHHHHHHHHHHHhC
Confidence 4467999999999999999984 6788988887 6677888899999998 778887 44789999999999
Q ss_pred CCCeEEEEEeCC
Q 035840 78 KPNGVIAAWTYT 89 (213)
Q Consensus 78 ~pgG~l~~~~~~ 89 (213)
|||.+++....
T Consensus 139 -~~G~l~~~~~~ 149 (195)
T 3cgg_A 139 -ADGRAVIGFGA 149 (195)
T ss_dssp -EEEEEEEEEET
T ss_pred -CCCEEEEEeCC
Confidence 99999875543
No 75
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.05 E-value=5.6e-11 Score=94.31 Aligned_cols=76 Identities=12% Similarity=0.046 Sum_probs=60.5
Q ss_pred CeEEEEeCCHHHHHHhhcC-----CCceEEecCCCCcchhhccC--CCCCCceeeeee-chhhc--cC---ChhHHHHHH
Q 035840 6 KNVIATDTSPKQLEFAIKL-----PNIRYQLTPPTMSITELEQN--VATQSSVDLVTI-AAALH--WF---DLPQFYKQV 72 (213)
Q Consensus 6 ~~V~gvD~S~~ml~~Ar~~-----~~v~~~~~~~~~~~~d~~~~--~~~~~sfDlV~~-~~~~h--w~---d~~~~~~e~ 72 (213)
.+|+|+|+|+.|++.|++. .++++..+++ +++ ++++++||+|++ ..+++ .. ++..+++++
T Consensus 84 ~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~-------~~~~~~~~~~~fD~V~~d~~~~~~~~~~~~~~~~~l~~~ 156 (236)
T 1zx0_A 84 DEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLW-------EDVAPTLPDGHFDGILYDTYPLSEETWHTHQFNFIKNHA 156 (236)
T ss_dssp EEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCH-------HHHGGGSCTTCEEEEEECCCCCBGGGTTTHHHHHHHHTH
T ss_pred CeEEEEcCCHHHHHHHHHHHHhcCCCeEEEecCH-------HHhhcccCCCceEEEEECCcccchhhhhhhhHHHHHHHH
Confidence 4899999999999999973 4577888777 666 788999999998 55432 11 445779999
Q ss_pred HHHhcCCCeEEEEEeCC
Q 035840 73 KWVLKKPNGVIAAWTYT 89 (213)
Q Consensus 73 ~rvLk~pgG~l~~~~~~ 89 (213)
+|+|| |||.|++.+..
T Consensus 157 ~r~Lk-pgG~l~~~~~~ 172 (236)
T 1zx0_A 157 FRLLK-PGGVLTYCNLT 172 (236)
T ss_dssp HHHEE-EEEEEEECCHH
T ss_pred HHhcC-CCeEEEEEecC
Confidence 99999 99999876543
No 76
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.05 E-value=8.8e-11 Score=100.80 Aligned_cols=83 Identities=14% Similarity=0.102 Sum_probs=66.6
Q ss_pred cccCCeEEEEeCCHHHHHHhhcCCCceEEecCCCCcchhhccCCCCCCceeeeeechhhccC-ChhHHHHHHHHHhcCCC
Q 035840 2 AKIYKNVIATDTSPKQLEFAIKLPNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWF-DLPQFYKQVKWVLKKPN 80 (213)
Q Consensus 2 a~~~~~V~gvD~S~~ml~~Ar~~~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~-d~~~~~~e~~rvLk~pg 80 (213)
+++..+|+|+|+|+.|++.|++. ++...... +..++.+.+++++++||+|++..++|++ |+..++++++|+|| ||
T Consensus 126 ~~~g~~v~gvD~s~~~~~~a~~~-~~~~~~~~--~~~~~~~~l~~~~~~fD~I~~~~vl~h~~d~~~~l~~~~r~Lk-pg 201 (416)
T 4e2x_A 126 QEAGVRHLGFEPSSGVAAKAREK-GIRVRTDF--FEKATADDVRRTEGPANVIYAANTLCHIPYVQSVLEGVDALLA-PD 201 (416)
T ss_dssp HHTTCEEEEECCCHHHHHHHHTT-TCCEECSC--CSHHHHHHHHHHHCCEEEEEEESCGGGCTTHHHHHHHHHHHEE-EE
T ss_pred HHcCCcEEEECCCHHHHHHHHHc-CCCcceee--echhhHhhcccCCCCEEEEEECChHHhcCCHHHHHHHHHHHcC-CC
Confidence 45567999999999999999986 33333321 2223446777888999999999999999 99999999999999 99
Q ss_pred eEEEEEeC
Q 035840 81 GVIAAWTY 88 (213)
Q Consensus 81 G~l~~~~~ 88 (213)
|.+++...
T Consensus 202 G~l~i~~~ 209 (416)
T 4e2x_A 202 GVFVFEDP 209 (416)
T ss_dssp EEEEEEEE
T ss_pred eEEEEEeC
Confidence 99987643
No 77
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.05 E-value=2e-10 Score=93.47 Aligned_cols=78 Identities=15% Similarity=0.156 Sum_probs=65.1
Q ss_pred cccCCeEEEEeCCHHHHHHhhcC-----CCceEEecCCCCcchhhccCCCCCCceeeeeechhhccCC---hhHHHHHHH
Q 035840 2 AKIYKNVIATDTSPKQLEFAIKL-----PNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWFD---LPQFYKQVK 73 (213)
Q Consensus 2 a~~~~~V~gvD~S~~ml~~Ar~~-----~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~d---~~~~~~e~~ 73 (213)
+....+|+|+|+|+.|++.|++. .++++..+++ .+.++ +++||+|++..++||++ ...+++++.
T Consensus 139 ~~~g~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~-------~~~~~-~~~fD~i~~~~~~~~~~~~~~~~~l~~~~ 210 (286)
T 3m70_A 139 SLLGYDVTSWDHNENSIAFLNETKEKENLNISTALYDI-------NAANI-QENYDFIVSTVVFMFLNRERVPSIIKNMK 210 (286)
T ss_dssp HHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCG-------GGCCC-CSCEEEEEECSSGGGSCGGGHHHHHHHHH
T ss_pred HHCCCeEEEEECCHHHHHHHHHHHHHcCCceEEEEecc-------ccccc-cCCccEEEEccchhhCCHHHHHHHHHHHH
Confidence 45567999999999999999973 2678888877 67666 88899999999999994 348999999
Q ss_pred HHhcCCCeEEEEEeC
Q 035840 74 WVLKKPNGVIAAWTY 88 (213)
Q Consensus 74 rvLk~pgG~l~~~~~ 88 (213)
++|| |||.+++...
T Consensus 211 ~~Lk-pgG~l~i~~~ 224 (286)
T 3m70_A 211 EHTN-VGGYNLIVAA 224 (286)
T ss_dssp HTEE-EEEEEEEEEE
T ss_pred HhcC-CCcEEEEEEe
Confidence 9999 9999776543
No 78
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.05 E-value=5.3e-10 Score=91.71 Aligned_cols=72 Identities=14% Similarity=0.108 Sum_probs=61.0
Q ss_pred CCeEEEEeCCHHHHHHhhcC------CCceEEecCCCCcchhhccCCCCCCceeeeeechhhccCChhHHHHHHHHHhcC
Q 035840 5 YKNVIATDTSPKQLEFAIKL------PNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWFDLPQFYKQVKWVLKK 78 (213)
Q Consensus 5 ~~~V~gvD~S~~ml~~Ar~~------~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~d~~~~~~e~~rvLk~ 78 (213)
.++|+|+|+|++|++.||+. .+++|.++++ .+++ +++||+|++... --++.++++++.|+||
T Consensus 146 ga~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa-------~~l~--d~~FDvV~~~a~--~~d~~~~l~el~r~Lk- 213 (298)
T 3fpf_A 146 GMRVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDE-------TVID--GLEFDVLMVAAL--AEPKRRVFRNIHRYVD- 213 (298)
T ss_dssp CCEEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCG-------GGGG--GCCCSEEEECTT--CSCHHHHHHHHHHHCC-
T ss_pred CCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEECch-------hhCC--CCCcCEEEECCC--ccCHHHHHHHHHHHcC-
Confidence 57999999999999999973 5789999988 5554 788999997654 1389999999999999
Q ss_pred CCeEEEEEeC
Q 035840 79 PNGVIAAWTY 88 (213)
Q Consensus 79 pgG~l~~~~~ 88 (213)
|||+|++...
T Consensus 214 PGG~Lvv~~~ 223 (298)
T 3fpf_A 214 TETRIIYRTY 223 (298)
T ss_dssp TTCEEEEEEC
T ss_pred CCcEEEEEcC
Confidence 9999987664
No 79
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.04 E-value=3.1e-10 Score=93.83 Aligned_cols=76 Identities=18% Similarity=0.174 Sum_probs=64.6
Q ss_pred CCeEEEEeCCHHHHHHhhcC-------CCceEEecCCCCcchhhccCCCCCCceeeeeechhhccC---ChhHHHHHHHH
Q 035840 5 YKNVIATDTSPKQLEFAIKL-------PNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWF---DLPQFYKQVKW 74 (213)
Q Consensus 5 ~~~V~gvD~S~~ml~~Ar~~-------~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~---d~~~~~~e~~r 74 (213)
..+|+|+|+|+.|++.|++. +++++..+++ ++++ ++||+|++..++|++ ++..+++++.|
T Consensus 113 ~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~-------~~~~---~~fD~v~~~~~l~~~~~~~~~~~l~~~~~ 182 (318)
T 2fk8_A 113 DVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGW-------EDFA---EPVDRIVSIEAFEHFGHENYDDFFKRCFN 182 (318)
T ss_dssp CCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCG-------GGCC---CCCSEEEEESCGGGTCGGGHHHHHHHHHH
T ss_pred CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCh-------HHCC---CCcCEEEEeChHHhcCHHHHHHHHHHHHH
Confidence 56999999999999999973 3588888877 6653 789999999999988 67899999999
Q ss_pred HhcCCCeEEEEEeCCCC
Q 035840 75 VLKKPNGVIAAWTYTMP 91 (213)
Q Consensus 75 vLk~pgG~l~~~~~~~~ 91 (213)
+|| |||.+++.....+
T Consensus 183 ~Lk-pgG~l~~~~~~~~ 198 (318)
T 2fk8_A 183 IMP-ADGRMTVQSSVSY 198 (318)
T ss_dssp HSC-TTCEEEEEEEECC
T ss_pred hcC-CCcEEEEEEeccC
Confidence 999 9999988765543
No 80
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.03 E-value=2.5e-10 Score=89.96 Aligned_cols=71 Identities=14% Similarity=0.041 Sum_probs=62.4
Q ss_pred cccCCeEEEEeCCHHHHHHhhc-CCCceEEecCCCCcchhhccCCCC-CCceeeeeechhhccCChhHHHHHHHHHhcCC
Q 035840 2 AKIYKNVIATDTSPKQLEFAIK-LPNIRYQLTPPTMSITELEQNVAT-QSSVDLVTIAAALHWFDLPQFYKQVKWVLKKP 79 (213)
Q Consensus 2 a~~~~~V~gvD~S~~ml~~Ar~-~~~v~~~~~~~~~~~~d~~~~~~~-~~sfDlV~~~~~~hw~d~~~~~~e~~rvLk~p 79 (213)
++...+|+|+|+|+.|++.|++ .+++++.++++. +.+|++ +++||+|++. .++..+++++.|+|| |
T Consensus 67 ~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~------~~~~~~~~~~fD~v~~~-----~~~~~~l~~~~~~Lk-p 134 (226)
T 3m33_A 67 GPQAARWAAYDFSPELLKLARANAPHADVYEWNGK------GELPAGLGAPFGLIVSR-----RGPTSVILRLPELAA-P 134 (226)
T ss_dssp GGGSSEEEEEESCHHHHHHHHHHCTTSEEEECCSC------SSCCTTCCCCEEEEEEE-----SCCSGGGGGHHHHEE-E
T ss_pred HHcCCEEEEEECCHHHHHHHHHhCCCceEEEcchh------hccCCcCCCCEEEEEeC-----CCHHHHHHHHHHHcC-C
Confidence 4557799999999999999998 478999998873 567787 8999999987 589999999999999 9
Q ss_pred CeEEE
Q 035840 80 NGVIA 84 (213)
Q Consensus 80 gG~l~ 84 (213)
||.|+
T Consensus 135 gG~l~ 139 (226)
T 3m33_A 135 DAHFL 139 (226)
T ss_dssp EEEEE
T ss_pred CcEEE
Confidence 99997
No 81
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.03 E-value=2.3e-10 Score=94.54 Aligned_cols=77 Identities=12% Similarity=0.142 Sum_probs=63.9
Q ss_pred CCeEEEEeCCHHHHHHhhcC-------------CCceEEecCCCCcchhhccCC----C--CCCceeeeeechhhccC--
Q 035840 5 YKNVIATDTSPKQLEFAIKL-------------PNIRYQLTPPTMSITELEQNV----A--TQSSVDLVTIAAALHWF-- 63 (213)
Q Consensus 5 ~~~V~gvD~S~~ml~~Ar~~-------------~~v~~~~~~~~~~~~d~~~~~----~--~~~sfDlV~~~~~~hw~-- 63 (213)
..+|+|+|+|+.|++.|++. .++++.++++ ++.+ + ++++||+|++..++||+
T Consensus 57 ~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~-------~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~ 129 (313)
T 3bgv_A 57 INKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADS-------SKELLIDKFRDPQMCFDICSCQFVCHYSFE 129 (313)
T ss_dssp CSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCT-------TTSCSTTTCSSTTCCEEEEEEETCGGGGGG
T ss_pred CCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecc-------cccchhhhcccCCCCEEEEEEecchhhccC
Confidence 56999999999999999873 1578888888 5544 4 35589999999999998
Q ss_pred C---hhHHHHHHHHHhcCCCeEEEEEeCC
Q 035840 64 D---LPQFYKQVKWVLKKPNGVIAAWTYT 89 (213)
Q Consensus 64 d---~~~~~~e~~rvLk~pgG~l~~~~~~ 89 (213)
+ ...++.++.|+|| |||.|++...+
T Consensus 130 ~~~~~~~~l~~~~~~Lk-pgG~li~~~~~ 157 (313)
T 3bgv_A 130 SYEQADMMLRNACERLS-PGGYFIGTTPN 157 (313)
T ss_dssp SHHHHHHHHHHHHTTEE-EEEEEEEEEEC
T ss_pred CHHHHHHHHHHHHHHhC-CCcEEEEecCC
Confidence 4 3589999999999 99999877655
No 82
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.02 E-value=5.9e-11 Score=94.53 Aligned_cols=77 Identities=8% Similarity=-0.033 Sum_probs=59.7
Q ss_pred CCeEEEEeCCHHHHHHhhcC-----CCceEEecCCCCcchhhccCCCCCCceeeeee-----chhhccC-ChhHHHHHHH
Q 035840 5 YKNVIATDTSPKQLEFAIKL-----PNIRYQLTPPTMSITELEQNVATQSSVDLVTI-----AAALHWF-DLPQFYKQVK 73 (213)
Q Consensus 5 ~~~V~gvD~S~~ml~~Ar~~-----~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~-----~~~~hw~-d~~~~~~e~~ 73 (213)
.++|+|||+||.|++.|+++ .++++..++++. ...++++++||.|++ ..+.+.. |+..++++++
T Consensus 83 ~~~v~~id~~~~~~~~a~~~~~~~~~~~~~~~~~a~~-----~~~~~~~~~FD~i~~D~~~~~~~~~~~~~~~~~~~e~~ 157 (236)
T 3orh_A 83 IDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWED-----VAPTLPDGHFDGILYDTYPLSEETWHTHQFNFIKNHAF 157 (236)
T ss_dssp EEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHH-----HGGGSCTTCEEEEEECCCCCBGGGTTTHHHHHHHHTHH
T ss_pred CcEEEEEeCCHHHHHHHHHHHhhCCCceEEEeehHHh-----hcccccccCCceEEEeeeecccchhhhcchhhhhhhhh
Confidence 35899999999999999973 456777887721 112478889999873 4455444 9999999999
Q ss_pred HHhcCCCeEEEEEe
Q 035840 74 WVLKKPNGVIAAWT 87 (213)
Q Consensus 74 rvLk~pgG~l~~~~ 87 (213)
|+|| |||.|.+++
T Consensus 158 rvLk-PGG~l~f~~ 170 (236)
T 3orh_A 158 RLLK-PGGVLTYCN 170 (236)
T ss_dssp HHEE-EEEEEEECC
T ss_pred heeC-CCCEEEEEe
Confidence 9999 999997654
No 83
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.01 E-value=5.5e-10 Score=88.30 Aligned_cols=77 Identities=21% Similarity=0.253 Sum_probs=63.4
Q ss_pred cccCCeEEEEeCCHHHHHHhhcC-----CCceEEecCCCCcchhhccCCCCCCceeeeeech-hhccC----ChhHHHHH
Q 035840 2 AKIYKNVIATDTSPKQLEFAIKL-----PNIRYQLTPPTMSITELEQNVATQSSVDLVTIAA-ALHWF----DLPQFYKQ 71 (213)
Q Consensus 2 a~~~~~V~gvD~S~~ml~~Ar~~-----~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~-~~hw~----d~~~~~~e 71 (213)
++. .+|+|+|+|+.|++.|++. .++++..+++ .+++++ ++||+|++.. ++|++ +...++++
T Consensus 52 ~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~-------~~~~~~-~~fD~v~~~~~~~~~~~~~~~~~~~l~~ 122 (243)
T 3d2l_A 52 ADH-YEVTGVDLSEEMLEIAQEKAMETNRHVDFWVQDM-------RELELP-EPVDAITILCDSLNYLQTEADVKQTFDS 122 (243)
T ss_dssp TTT-SEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCG-------GGCCCS-SCEEEEEECTTGGGGCCSHHHHHHHHHH
T ss_pred hhC-CeEEEEECCHHHHHHHHHhhhhcCCceEEEEcCh-------hhcCCC-CCcCEEEEeCCchhhcCCHHHHHHHHHH
Confidence 344 7899999999999999973 4688888877 677665 7899999886 88887 45688999
Q ss_pred HHHHhcCCCeEEEEEeC
Q 035840 72 VKWVLKKPNGVIAAWTY 88 (213)
Q Consensus 72 ~~rvLk~pgG~l~~~~~ 88 (213)
+.++|| |||.+++...
T Consensus 123 ~~~~L~-pgG~l~~~~~ 138 (243)
T 3d2l_A 123 AARLLT-DGGKLLFDVH 138 (243)
T ss_dssp HHHHEE-EEEEEEEEEE
T ss_pred HHHhcC-CCeEEEEEcC
Confidence 999999 9999976443
No 84
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=98.97 E-value=1.1e-09 Score=93.19 Aligned_cols=93 Identities=12% Similarity=0.149 Sum_probs=72.9
Q ss_pred cccCCeEEEEeCCHHHHHHhhcC-----CCceEEecCCCCcchhhccCCCCCCceeeeeechhhcc-----C-ChhHHHH
Q 035840 2 AKIYKNVIATDTSPKQLEFAIKL-----PNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHW-----F-DLPQFYK 70 (213)
Q Consensus 2 a~~~~~V~gvD~S~~ml~~Ar~~-----~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw-----~-d~~~~~~ 70 (213)
+....+|+|+|+|+.|++.|++. .++++..+++ .+.+.++++||+|+++-.+|+ . +...++.
T Consensus 252 a~~g~~V~gvDis~~al~~A~~n~~~~~~~v~~~~~D~-------~~~~~~~~~fD~Ii~npp~~~~~~~~~~~~~~~l~ 324 (381)
T 3dmg_A 252 ARMGAEVVGVEDDLASVLSLQKGLEANALKAQALHSDV-------DEALTEEARFDIIVTNPPFHVGGAVILDVAQAFVN 324 (381)
T ss_dssp HHTTCEEEEEESBHHHHHHHHHHHHHTTCCCEEEECST-------TTTSCTTCCEEEEEECCCCCTTCSSCCHHHHHHHH
T ss_pred HHcCCEEEEEECCHHHHHHHHHHHHHcCCCeEEEEcch-------hhccccCCCeEEEEECCchhhcccccHHHHHHHHH
Confidence 34567999999999999999973 2478888887 666666789999999999998 4 6678999
Q ss_pred HHHHHhcCCCeEEEEEeCCCCCcChHHHHhcc
Q 035840 71 QVKWVLKKPNGVIAAWTYTMPEINESVGAVFK 102 (213)
Q Consensus 71 e~~rvLk~pgG~l~~~~~~~~~~~~~~~~~~~ 102 (213)
++.++|| |||.+++...........+.+.+.
T Consensus 325 ~~~~~Lk-pGG~l~iv~n~~l~~~~~l~~~f~ 355 (381)
T 3dmg_A 325 VAAARLR-PGGVFFLVSNPFLKYEPLLEEKFG 355 (381)
T ss_dssp HHHHHEE-EEEEEEEEECTTSCHHHHHHHHHS
T ss_pred HHHHhcC-cCcEEEEEEcCCCChHHHHHHhhc
Confidence 9999999 999999877665433334444443
No 85
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=98.96 E-value=1.6e-09 Score=99.17 Aligned_cols=79 Identities=19% Similarity=0.178 Sum_probs=65.7
Q ss_pred cccC---CeEEEEeCCHHHHHHhhc------------CCCceEEecCCCCcchhhccCCCCCCceeeeeechhhccCCh-
Q 035840 2 AKIY---KNVIATDTSPKQLEFAIK------------LPNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWFDL- 65 (213)
Q Consensus 2 a~~~---~~V~gvD~S~~ml~~Ar~------------~~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~d~- 65 (213)
++.+ .+|+|+|+|+.|++.|++ .++++|.++++ .++++++++||+|++..++||++.
T Consensus 740 Ar~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa-------~dLp~~d~sFDlVV~~eVLeHL~dp 812 (950)
T 3htx_A 740 LDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSI-------LEFDSRLHDVDIGTCLEVIEHMEED 812 (950)
T ss_dssp TSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCT-------TSCCTTSCSCCEEEEESCGGGSCHH
T ss_pred HHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECch-------HhCCcccCCeeEEEEeCchhhCChH
Confidence 4555 799999999999999986 24688889888 788889999999999999999943
Q ss_pred h--HHHHHHHHHhcCCCeEEEEEeCC
Q 035840 66 P--QFYKQVKWVLKKPNGVIAAWTYT 89 (213)
Q Consensus 66 ~--~~~~e~~rvLk~pgG~l~~~~~~ 89 (213)
. .+++++.|+|| || .+++...+
T Consensus 813 ~l~~~L~eI~RvLK-PG-~LIISTPN 836 (950)
T 3htx_A 813 QACEFGEKVLSLFH-PK-LLIVSTPN 836 (950)
T ss_dssp HHHHHHHHHHHTTC-CS-EEEEEECB
T ss_pred HHHHHHHHHHHHcC-CC-EEEEEecC
Confidence 3 48899999999 99 66565543
No 86
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=98.95 E-value=9.5e-10 Score=86.09 Aligned_cols=77 Identities=17% Similarity=0.140 Sum_probs=63.4
Q ss_pred CCeEEEEeCCHHHHHHhhc------CCCceEEecCCCCcchhhccCC--CCCCceeeeeechhhccCC---------hhH
Q 035840 5 YKNVIATDTSPKQLEFAIK------LPNIRYQLTPPTMSITELEQNV--ATQSSVDLVTIAAALHWFD---------LPQ 67 (213)
Q Consensus 5 ~~~V~gvD~S~~ml~~Ar~------~~~v~~~~~~~~~~~~d~~~~~--~~~~sfDlV~~~~~~hw~d---------~~~ 67 (213)
..+|+|+|+|+.|++.|++ .+++++..+++ .+++ +++++||.|++..+-.|.. ...
T Consensus 62 ~~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~-------~~l~~~~~~~~~d~v~~~~~~p~~~~~~~~~rl~~~~ 134 (213)
T 2fca_A 62 DINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDA-------DTLTDVFEPGEVKRVYLNFSDPWPKKRHEKRRLTYSH 134 (213)
T ss_dssp TSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCG-------GGHHHHCCTTSCCEEEEESCCCCCSGGGGGGSTTSHH
T ss_pred CCCEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCH-------HHHHhhcCcCCcCEEEEECCCCCcCccccccccCcHH
Confidence 4689999999999999987 25788998888 4444 6788999999887777763 367
Q ss_pred HHHHHHHHhcCCCeEEEEEeCC
Q 035840 68 FYKQVKWVLKKPNGVIAAWTYT 89 (213)
Q Consensus 68 ~~~e~~rvLk~pgG~l~~~~~~ 89 (213)
+++++.|+|| |||.|++.+..
T Consensus 135 ~l~~~~~~Lk-pgG~l~~~td~ 155 (213)
T 2fca_A 135 FLKKYEEVMG-KGGSIHFKTDN 155 (213)
T ss_dssp HHHHHHHHHT-TSCEEEEEESC
T ss_pred HHHHHHHHcC-CCCEEEEEeCC
Confidence 8999999999 99999877643
No 87
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=98.95 E-value=9.5e-10 Score=86.57 Aligned_cols=76 Identities=16% Similarity=0.172 Sum_probs=62.6
Q ss_pred CeEEEEeCCHHHHHHhhcC------CCceEEecCCCCcchhhccC-C--CCCCceeeeeechhhccCChh---------H
Q 035840 6 KNVIATDTSPKQLEFAIKL------PNIRYQLTPPTMSITELEQN-V--ATQSSVDLVTIAAALHWFDLP---------Q 67 (213)
Q Consensus 6 ~~V~gvD~S~~ml~~Ar~~------~~v~~~~~~~~~~~~d~~~~-~--~~~~sfDlV~~~~~~hw~d~~---------~ 67 (213)
.+|+|+|+|+.|++.|++. +|+++..+++ .++ + +++++||.|++.....|.... .
T Consensus 59 ~~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da-------~~~l~~~~~~~~~d~v~~~~~~p~~~~~~~~rr~~~~~ 131 (218)
T 3dxy_A 59 QDFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDA-------VEVLHKMIPDNSLRMVQLFFPDPWHKARHNKRRIVQVP 131 (218)
T ss_dssp SEEEEECSCHHHHHHHHHHHHHTTCSSEEEECSCH-------HHHHHHHSCTTCEEEEEEESCCCCCSGGGGGGSSCSHH
T ss_pred CeEEEEEecHHHHHHHHHHHHHhCCCcEEEEECCH-------HHHHHHHcCCCChheEEEeCCCCccchhhhhhhhhhHH
Confidence 4799999999999999862 5789999887 442 3 678999999999888877322 4
Q ss_pred HHHHHHHHhcCCCeEEEEEeCC
Q 035840 68 FYKQVKWVLKKPNGVIAAWTYT 89 (213)
Q Consensus 68 ~~~e~~rvLk~pgG~l~~~~~~ 89 (213)
+++++.|+|| |||.|.+.+..
T Consensus 132 ~l~~~~r~Lk-pGG~l~i~td~ 152 (218)
T 3dxy_A 132 FAELVKSKLQ-LGGVFHMATDW 152 (218)
T ss_dssp HHHHHHHHEE-EEEEEEEEESC
T ss_pred HHHHHHHHcC-CCcEEEEEeCC
Confidence 9999999999 99999887654
No 88
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=98.94 E-value=2.2e-09 Score=85.26 Aligned_cols=77 Identities=13% Similarity=0.070 Sum_probs=62.9
Q ss_pred CCeEEEEeCCHHHHHHhhc----CCCceEEecCCCCcchhhccCCCCCCceeeeeechhhccCChhHHHHHHHHHhcCCC
Q 035840 5 YKNVIATDTSPKQLEFAIK----LPNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWFDLPQFYKQVKWVLKKPN 80 (213)
Q Consensus 5 ~~~V~gvD~S~~ml~~Ar~----~~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~d~~~~~~e~~rvLk~pg 80 (213)
-++|+|+|+|+.|++.|++ .+|+..+.+++ .+.+..++...++|+|++-...+| +...++.++.|+|| ||
T Consensus 102 ~G~V~avD~s~~~~~~l~~~a~~~~ni~~V~~d~----~~p~~~~~~~~~vDvVf~d~~~~~-~~~~~l~~~~r~LK-pG 175 (233)
T 4df3_A 102 RGRIYGVEFAPRVMRDLLTVVRDRRNIFPILGDA----RFPEKYRHLVEGVDGLYADVAQPE-QAAIVVRNARFFLR-DG 175 (233)
T ss_dssp TCEEEEEECCHHHHHHHHHHSTTCTTEEEEESCT----TCGGGGTTTCCCEEEEEECCCCTT-HHHHHHHHHHHHEE-EE
T ss_pred CceEEEEeCCHHHHHHHHHhhHhhcCeeEEEEec----cCccccccccceEEEEEEeccCCh-hHHHHHHHHHHhcc-CC
Confidence 3689999999999999886 47888888877 344666788889999987554444 77889999999999 99
Q ss_pred eEEEEEe
Q 035840 81 GVIAAWT 87 (213)
Q Consensus 81 G~l~~~~ 87 (213)
|.+++..
T Consensus 176 G~lvI~i 182 (233)
T 4df3_A 176 GYMLMAI 182 (233)
T ss_dssp EEEEEEE
T ss_pred CEEEEEE
Confidence 9998753
No 89
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=98.94 E-value=5.2e-10 Score=90.29 Aligned_cols=80 Identities=15% Similarity=0.161 Sum_probs=62.1
Q ss_pred CeEEEEeCCHH------HHHHhhcC-------CCceEEecCCCCcchhhccCCCCCCceeeeeechhhccC-ChhHHHHH
Q 035840 6 KNVIATDTSPK------QLEFAIKL-------PNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWF-DLPQFYKQ 71 (213)
Q Consensus 6 ~~V~gvD~S~~------ml~~Ar~~-------~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~-d~~~~~~e 71 (213)
.+|+|+|+|+. |++.|+++ +++++..++ +.. ...+|+++++||+|++..++|++ ++..+++.
T Consensus 69 ~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d-~~~---~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~ 144 (275)
T 3bkx_A 69 GHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNT-NLS---DDLGPIADQHFDRVVLAHSLWYFASANALALL 144 (275)
T ss_dssp CEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSC-CTT---TCCGGGTTCCCSEEEEESCGGGSSCHHHHHHH
T ss_pred CEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECC-hhh---hccCCCCCCCEEEEEEccchhhCCCHHHHHHH
Confidence 69999999998 99999873 468888877 100 15567788999999999999999 77775566
Q ss_pred HHHHhcCCCeEEEEEeCCC
Q 035840 72 VKWVLKKPNGVIAAWTYTM 90 (213)
Q Consensus 72 ~~rvLk~pgG~l~~~~~~~ 90 (213)
+.++++ |||.+++..+..
T Consensus 145 ~~~l~~-~gG~l~~~~~~~ 162 (275)
T 3bkx_A 145 FKNMAA-VCDHVDVAEWSM 162 (275)
T ss_dssp HHHHTT-TCSEEEEEEECS
T ss_pred HHHHhC-CCCEEEEEEecC
Confidence 666666 799998876654
No 90
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=98.92 E-value=3.6e-09 Score=81.81 Aligned_cols=74 Identities=22% Similarity=0.208 Sum_probs=62.1
Q ss_pred CeEEEEeCCHHHHHHhhcC------CCceEEecCCCCcchhhccCCCCCCceeeeeechhhccCChhHHHHHHHHHhcCC
Q 035840 6 KNVIATDTSPKQLEFAIKL------PNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWFDLPQFYKQVKWVLKKP 79 (213)
Q Consensus 6 ~~V~gvD~S~~ml~~Ar~~------~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~d~~~~~~e~~rvLk~p 79 (213)
.+|+|+|+|+.|++.|++. +++++..+++ .+.....++||+|++..+++ +...+++++.++|| |
T Consensus 65 ~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~-------~~~~~~~~~~D~i~~~~~~~--~~~~~l~~~~~~Lk-p 134 (204)
T 3e05_A 65 GRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFA-------PEGLDDLPDPDRVFIGGSGG--MLEEIIDAVDRRLK-S 134 (204)
T ss_dssp SEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCT-------TTTCTTSCCCSEEEESCCTT--CHHHHHHHHHHHCC-T
T ss_pred CEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCCh-------hhhhhcCCCCCEEEECCCCc--CHHHHHHHHHHhcC-C
Confidence 7999999999999999973 5788888887 43333346799999988877 89999999999999 9
Q ss_pred CeEEEEEeCC
Q 035840 80 NGVIAAWTYT 89 (213)
Q Consensus 80 gG~l~~~~~~ 89 (213)
||.+++....
T Consensus 135 gG~l~~~~~~ 144 (204)
T 3e05_A 135 EGVIVLNAVT 144 (204)
T ss_dssp TCEEEEEECB
T ss_pred CeEEEEEecc
Confidence 9999887554
No 91
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=98.92 E-value=1.7e-09 Score=86.19 Aligned_cols=76 Identities=24% Similarity=0.283 Sum_probs=60.7
Q ss_pred cccCCeEEEEeCCHHHHHHhhcC-----CCceEEecCCCCcchhhccCCCCCCceeeeeech-hhccC---ChhHHHHHH
Q 035840 2 AKIYKNVIATDTSPKQLEFAIKL-----PNIRYQLTPPTMSITELEQNVATQSSVDLVTIAA-ALHWF---DLPQFYKQV 72 (213)
Q Consensus 2 a~~~~~V~gvD~S~~ml~~Ar~~-----~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~-~~hw~---d~~~~~~e~ 72 (213)
+....+|+|+|+|+.|++.|++. .++++..+++ .+++++ ++||+|++.. +++++ +...+++++
T Consensus 60 ~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~-------~~~~~~-~~fD~v~~~~~~~~~~~~~~~~~~l~~~ 131 (252)
T 1wzn_A 60 AERGYEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDV-------LEIAFK-NEFDAVTMFFSTIMYFDEEDLRKLFSKV 131 (252)
T ss_dssp HHTTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEESCG-------GGCCCC-SCEEEEEECSSGGGGSCHHHHHHHHHHH
T ss_pred HHCCCeEEEEECCHHHHHHHHHHHHhcCCceEEEECCh-------hhcccC-CCccEEEEcCCchhcCCHHHHHHHHHHH
Confidence 44567999999999999999873 3678888877 666654 6799999864 45555 567899999
Q ss_pred HHHhcCCCeEEEEE
Q 035840 73 KWVLKKPNGVIAAW 86 (213)
Q Consensus 73 ~rvLk~pgG~l~~~ 86 (213)
.++|| |||.+++-
T Consensus 132 ~~~L~-pgG~li~~ 144 (252)
T 1wzn_A 132 AEALK-PGGVFITD 144 (252)
T ss_dssp HHHEE-EEEEEEEE
T ss_pred HHHcC-CCeEEEEe
Confidence 99999 99998753
No 92
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=98.90 E-value=3.3e-09 Score=80.55 Aligned_cols=79 Identities=19% Similarity=0.121 Sum_probs=65.5
Q ss_pred cccCCeEEEEeCCHHHHHHhhcC------CC--ceEEecCCCCcchhhccCCCCCCceeeeeechhhccC--ChhHHHHH
Q 035840 2 AKIYKNVIATDTSPKQLEFAIKL------PN--IRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWF--DLPQFYKQ 71 (213)
Q Consensus 2 a~~~~~V~gvD~S~~ml~~Ar~~------~~--v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~--d~~~~~~e 71 (213)
+....+|+|+|+|+.|++.|++. ++ +++..+++ .+ ++++++||+|++...+||. +...++++
T Consensus 71 ~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~-------~~-~~~~~~~D~v~~~~~~~~~~~~~~~~l~~ 142 (194)
T 1dus_A 71 ADEVKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDL-------YE-NVKDRKYNKIITNPPIRAGKEVLHRIIEE 142 (194)
T ss_dssp GGGSSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECST-------TT-TCTTSCEEEEEECCCSTTCHHHHHHHHHH
T ss_pred HHcCCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECch-------hc-ccccCCceEEEECCCcccchhHHHHHHHH
Confidence 34467999999999999999973 34 88888877 44 3557789999999999883 77899999
Q ss_pred HHHHhcCCCeEEEEEeCC
Q 035840 72 VKWVLKKPNGVIAAWTYT 89 (213)
Q Consensus 72 ~~rvLk~pgG~l~~~~~~ 89 (213)
+.++|| |||.+++....
T Consensus 143 ~~~~L~-~gG~l~~~~~~ 159 (194)
T 1dus_A 143 GKELLK-DNGEIWVVIQT 159 (194)
T ss_dssp HHHHEE-EEEEEEEEEES
T ss_pred HHHHcC-CCCEEEEEECC
Confidence 999999 99999877665
No 93
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=98.90 E-value=2.1e-09 Score=83.67 Aligned_cols=67 Identities=21% Similarity=0.263 Sum_probs=59.9
Q ss_pred CeEEEEeCCHHHHHHhhcCCCceEEecCCCCcchhhccCCCCCCceeeeeechhhccCChhHHHHHHHHHhcCCCeEEEE
Q 035840 6 KNVIATDTSPKQLEFAIKLPNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWFDLPQFYKQVKWVLKKPNGVIAA 85 (213)
Q Consensus 6 ~~V~gvD~S~~ml~~Ar~~~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~d~~~~~~e~~rvLk~pgG~l~~ 85 (213)
.+|+|+|+|+. ++++..+++ +++++++++||+|++..++||-++..++.++.++|| |||.+++
T Consensus 87 ~~v~~~D~s~~---------~~~~~~~d~-------~~~~~~~~~fD~v~~~~~l~~~~~~~~l~~~~~~L~-~gG~l~i 149 (215)
T 2zfu_A 87 NPVHCFDLASL---------DPRVTVCDM-------AQVPLEDESVDVAVFCLSLMGTNIRDFLEEANRVLK-PGGLLKV 149 (215)
T ss_dssp SCEEEEESSCS---------STTEEESCT-------TSCSCCTTCEEEEEEESCCCSSCHHHHHHHHHHHEE-EEEEEEE
T ss_pred ccEEEEeCCCC---------CceEEEecc-------ccCCCCCCCEeEEEEehhccccCHHHHHHHHHHhCC-CCeEEEE
Confidence 58999999998 567888877 778888999999999999998899999999999999 9999988
Q ss_pred EeCC
Q 035840 86 WTYT 89 (213)
Q Consensus 86 ~~~~ 89 (213)
....
T Consensus 150 ~~~~ 153 (215)
T 2zfu_A 150 AEVS 153 (215)
T ss_dssp EECG
T ss_pred EEcC
Confidence 7655
No 94
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=98.90 E-value=2.7e-09 Score=84.95 Aligned_cols=76 Identities=12% Similarity=0.147 Sum_probs=59.4
Q ss_pred CeEEEEeCCHHHHHHhhc------------CCCceEEecCCCCcchhhcc-CC--CCCCceeeeeechhhccCC------
Q 035840 6 KNVIATDTSPKQLEFAIK------------LPNIRYQLTPPTMSITELEQ-NV--ATQSSVDLVTIAAALHWFD------ 64 (213)
Q Consensus 6 ~~V~gvD~S~~ml~~Ar~------------~~~v~~~~~~~~~~~~d~~~-~~--~~~~sfDlV~~~~~~hw~d------ 64 (213)
..|+|+|+|+.|++.|++ .+++++..+++ .+ ++ +++++||.|++...-.|..
T Consensus 71 ~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~-------~~~l~~~~~~~~~D~v~~~~~dp~~k~~h~kr 143 (235)
T 3ckk_A 71 TLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNA-------MKHLPNFFYKGQLTKMFFLFPDPHFKRTKHKW 143 (235)
T ss_dssp SEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCT-------TTCHHHHCCTTCEEEEEEESCC----------
T ss_pred CeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcH-------HHhhhhhCCCcCeeEEEEeCCCchhhhhhhhh
Confidence 589999999999998863 35789999988 43 45 7789999999877766652
Q ss_pred ---hhHHHHHHHHHhcCCCeEEEEEeCC
Q 035840 65 ---LPQFYKQVKWVLKKPNGVIAAWTYT 89 (213)
Q Consensus 65 ---~~~~~~e~~rvLk~pgG~l~~~~~~ 89 (213)
...+++++.|+|| |||.|.+.+..
T Consensus 144 r~~~~~~l~~~~~~Lk-pGG~l~~~td~ 170 (235)
T 3ckk_A 144 RIISPTLLAEYAYVLR-VGGLVYTITDV 170 (235)
T ss_dssp -CCCHHHHHHHHHHEE-EEEEEEEEESC
T ss_pred hhhhHHHHHHHHHHCC-CCCEEEEEeCC
Confidence 1479999999999 99999876543
No 95
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=98.88 E-value=2.1e-09 Score=85.44 Aligned_cols=73 Identities=25% Similarity=0.210 Sum_probs=60.9
Q ss_pred cCCeEEEEeCCHHHHHHhhcC------CCceEEecCCCCcchhhccCCCC---CCceeeeeechhhccCChhHHHHHHHH
Q 035840 4 IYKNVIATDTSPKQLEFAIKL------PNIRYQLTPPTMSITELEQNVAT---QSSVDLVTIAAALHWFDLPQFYKQVKW 74 (213)
Q Consensus 4 ~~~~V~gvD~S~~ml~~Ar~~------~~v~~~~~~~~~~~~d~~~~~~~---~~sfDlV~~~~~~hw~d~~~~~~e~~r 74 (213)
...+|+|+|+|+.|++.|++. +++++..+++ +++++. +++||+|++.. +.+...+++++.+
T Consensus 93 ~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~-------~~~~~~~~~~~~fD~V~~~~---~~~~~~~l~~~~~ 162 (240)
T 1xdz_A 93 PHLHVTIVDSLNKRITFLEKLSEALQLENTTFCHDRA-------ETFGQRKDVRESYDIVTARA---VARLSVLSELCLP 162 (240)
T ss_dssp TTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEESCH-------HHHTTCTTTTTCEEEEEEEC---CSCHHHHHHHHGG
T ss_pred CCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEeccH-------HHhcccccccCCccEEEEec---cCCHHHHHHHHHH
Confidence 356899999999999999872 5788888887 666653 67899999865 3489999999999
Q ss_pred HhcCCCeEEEEEe
Q 035840 75 VLKKPNGVIAAWT 87 (213)
Q Consensus 75 vLk~pgG~l~~~~ 87 (213)
+|| |||.|++..
T Consensus 163 ~Lk-pgG~l~~~~ 174 (240)
T 1xdz_A 163 LVK-KNGLFVALK 174 (240)
T ss_dssp GEE-EEEEEEEEE
T ss_pred hcC-CCCEEEEEe
Confidence 999 999998763
No 96
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=98.87 E-value=1.1e-09 Score=88.96 Aligned_cols=84 Identities=18% Similarity=0.178 Sum_probs=60.7
Q ss_pred CCeEEEEeCCHHHHHHhhcC------CCceEEecCCCCcchhhccCCCCCCcee-----eeeechhhccC-C---hhHHH
Q 035840 5 YKNVIATDTSPKQLEFAIKL------PNIRYQLTPPTMSITELEQNVATQSSVD-----LVTIAAALHWF-D---LPQFY 69 (213)
Q Consensus 5 ~~~V~gvD~S~~ml~~Ar~~------~~v~~~~~~~~~~~~d~~~~~~~~~sfD-----lV~~~~~~hw~-d---~~~~~ 69 (213)
..+|+|||.||.||+.||++ .+++|+++|+.....-++ .+...++|| .|+++.++||+ | +..++
T Consensus 105 ~arVv~VD~sp~mLa~Ar~~l~~~~~~~~~~v~aD~~~~~~~l~-~~~~~~~~D~~~p~av~~~avLH~l~d~~~p~~~l 183 (277)
T 3giw_A 105 ESRVVYVDNDPIVLTLSQGLLASTPEGRTAYVEADMLDPASILD-APELRDTLDLTRPVALTVIAIVHFVLDEDDAVGIV 183 (277)
T ss_dssp TCEEEEEECCHHHHHTTHHHHCCCSSSEEEEEECCTTCHHHHHT-CHHHHTTCCTTSCCEEEEESCGGGSCGGGCHHHHH
T ss_pred CCEEEEEeCChHHHHHHHHHhccCCCCcEEEEEecccChhhhhc-ccccccccCcCCcchHHhhhhHhcCCchhhHHHHH
Confidence 46999999999999999983 247888988731100000 011134455 58899999999 5 46799
Q ss_pred HHHHHHhcCCCeEEEEEeCCC
Q 035840 70 KQVKWVLKKPNGVIAAWTYTM 90 (213)
Q Consensus 70 ~e~~rvLk~pgG~l~~~~~~~ 90 (213)
+++.++|+ |||.|++.....
T Consensus 184 ~~l~~~L~-PGG~Lvls~~~~ 203 (277)
T 3giw_A 184 RRLLEPLP-SGSYLAMSIGTA 203 (277)
T ss_dssp HHHHTTSC-TTCEEEEEEECC
T ss_pred HHHHHhCC-CCcEEEEEeccC
Confidence 99999999 999998876553
No 97
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=98.86 E-value=7.9e-09 Score=80.55 Aligned_cols=76 Identities=22% Similarity=0.267 Sum_probs=63.1
Q ss_pred CCeEEEEeCCHHHHHHhhcC------CCceEEecCCCCcchhhccCC--CCCCceeeeeechhhccCC---------hhH
Q 035840 5 YKNVIATDTSPKQLEFAIKL------PNIRYQLTPPTMSITELEQNV--ATQSSVDLVTIAAALHWFD---------LPQ 67 (213)
Q Consensus 5 ~~~V~gvD~S~~ml~~Ar~~------~~v~~~~~~~~~~~~d~~~~~--~~~~sfDlV~~~~~~hw~d---------~~~ 67 (213)
..+|+|+|+|+.|++.|++. +++.+..+++ .+++ +++++||+|++.....|.. ...
T Consensus 65 ~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~-------~~~~~~~~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~ 137 (214)
T 1yzh_A 65 DINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDG-------SDLTDYFEDGEIDRLYLNFSDPWPKKRHEKRRLTYKT 137 (214)
T ss_dssp TSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCS-------SCGGGTSCTTCCSEEEEESCCCCCSGGGGGGSTTSHH
T ss_pred CCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCH-------HHHHhhcCCCCCCEEEEECCCCccccchhhhccCCHH
Confidence 36899999999999999872 6889999888 4454 6788999999998777763 257
Q ss_pred HHHHHHHHhcCCCeEEEEEeC
Q 035840 68 FYKQVKWVLKKPNGVIAAWTY 88 (213)
Q Consensus 68 ~~~e~~rvLk~pgG~l~~~~~ 88 (213)
++.++.++|| |||.|.+.+.
T Consensus 138 ~l~~~~~~Lk-pgG~l~~~~~ 157 (214)
T 1yzh_A 138 FLDTFKRILP-ENGEIHFKTD 157 (214)
T ss_dssp HHHHHHHHSC-TTCEEEEEES
T ss_pred HHHHHHHHcC-CCcEEEEEeC
Confidence 9999999999 9999987653
No 98
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=98.86 E-value=4.3e-09 Score=79.18 Aligned_cols=74 Identities=15% Similarity=0.098 Sum_probs=58.8
Q ss_pred CCeEEEEeCCHHHHHHhhcC------C-CceEEecCCCCcchhhccCCCCCCceeeeeechhhccCChhHHHHHHHHHhc
Q 035840 5 YKNVIATDTSPKQLEFAIKL------P-NIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWFDLPQFYKQVKWVLK 77 (213)
Q Consensus 5 ~~~V~gvD~S~~ml~~Ar~~------~-~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~d~~~~~~e~~rvLk 77 (213)
..+|+|+|+|+.|++.|++. + ++ +..+++. +.++..+++||+|++..++++ ..+++++.++||
T Consensus 49 ~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~------~~~~~~~~~~D~i~~~~~~~~---~~~l~~~~~~L~ 118 (178)
T 3hm2_A 49 QTTAVCFEISEERRERILSNAINLGVSDRI-AVQQGAP------RAFDDVPDNPDVIFIGGGLTA---PGVFAAAWKRLP 118 (178)
T ss_dssp SEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTT------GGGGGCCSCCSEEEECC-TTC---TTHHHHHHHTCC
T ss_pred CCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchH------hhhhccCCCCCEEEECCcccH---HHHHHHHHHhcC
Confidence 46899999999999999962 3 56 6776662 333333378999999999987 889999999999
Q ss_pred CCCeEEEEEeCC
Q 035840 78 KPNGVIAAWTYT 89 (213)
Q Consensus 78 ~pgG~l~~~~~~ 89 (213)
|||.+++....
T Consensus 119 -~gG~l~~~~~~ 129 (178)
T 3hm2_A 119 -VGGRLVANAVT 129 (178)
T ss_dssp -TTCEEEEEECS
T ss_pred -CCCEEEEEeec
Confidence 99999877655
No 99
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=98.86 E-value=2.4e-09 Score=81.89 Aligned_cols=77 Identities=14% Similarity=0.076 Sum_probs=64.4
Q ss_pred CCeEEEEeCCHHHHHHhhcC------CCceEEecCCCCcchhhccCC--CCCCceeeeeechhhccC--ChhHHHHHHHH
Q 035840 5 YKNVIATDTSPKQLEFAIKL------PNIRYQLTPPTMSITELEQNV--ATQSSVDLVTIAAALHWF--DLPQFYKQVKW 74 (213)
Q Consensus 5 ~~~V~gvD~S~~ml~~Ar~~------~~v~~~~~~~~~~~~d~~~~~--~~~~sfDlV~~~~~~hw~--d~~~~~~e~~r 74 (213)
..+|+|+|+|+.|++.|++. +++++.++++ .+++ +++++||+|++...+|+. +..+++.++.+
T Consensus 67 ~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~-------~~~~~~~~~~~fD~i~~~~p~~~~~~~~~~~l~~~~~ 139 (189)
T 3p9n_A 67 AASVLFVESDQRSAAVIARNIEALGLSGATLRRGAV-------AAVVAAGTTSPVDLVLADPPYNVDSADVDAILAALGT 139 (189)
T ss_dssp CSEEEEEECCHHHHHHHHHHHHHHTCSCEEEEESCH-------HHHHHHCCSSCCSEEEECCCTTSCHHHHHHHHHHHHH
T ss_pred CCeEEEEECCHHHHHHHHHHHHHcCCCceEEEEccH-------HHHHhhccCCCccEEEECCCCCcchhhHHHHHHHHHh
Confidence 45899999999999999973 4788898887 4432 457889999999989885 78999999999
Q ss_pred --HhcCCCeEEEEEeCC
Q 035840 75 --VLKKPNGVIAAWTYT 89 (213)
Q Consensus 75 --vLk~pgG~l~~~~~~ 89 (213)
+|| |||.|++....
T Consensus 140 ~~~L~-pgG~l~~~~~~ 155 (189)
T 3p9n_A 140 NGWTR-EGTVAVVERAT 155 (189)
T ss_dssp SSSCC-TTCEEEEEEET
T ss_pred cCccC-CCeEEEEEecC
Confidence 999 99999876544
No 100
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=98.86 E-value=1.9e-09 Score=87.18 Aligned_cols=78 Identities=13% Similarity=-0.001 Sum_probs=57.2
Q ss_pred CcccCCeEEEEeCCHHHHHHhhcCCCceEEecCCCCcchhhccCCC-----CCCceeeeeechhhccC---ChhHHHHHH
Q 035840 1 LAKIYKNVIATDTSPKQLEFAIKLPNIRYQLTPPTMSITELEQNVA-----TQSSVDLVTIAAALHWF---DLPQFYKQV 72 (213)
Q Consensus 1 la~~~~~V~gvD~S~~ml~~Ar~~~~v~~~~~~~~~~~~d~~~~~~-----~~~sfDlV~~~~~~hw~---d~~~~~~e~ 72 (213)
||+...+|+|+|+|+.|++.|++.....+...+. ++.+. .+++||+|++..++|++ +...++.++
T Consensus 63 La~~g~~V~gvD~S~~ml~~Ar~~~~~~~v~~~~-------~~~~~~~~~~~~~~fD~Vv~~~~l~~~~~~~~~~~l~~l 135 (261)
T 3iv6_A 63 ALERGASVTVFDFSQRMCDDLAEALADRCVTIDL-------LDITAEIPKELAGHFDFVLNDRLINRFTTEEARRACLGM 135 (261)
T ss_dssp HHHTTCEEEEEESCHHHHHHHHHHTSSSCCEEEE-------CCTTSCCCGGGTTCCSEEEEESCGGGSCHHHHHHHHHHH
T ss_pred HHhcCCEEEEEECCHHHHHHHHHHHHhccceeee-------eecccccccccCCCccEEEEhhhhHhCCHHHHHHHHHHH
Confidence 3567889999999999999999742111222222 22222 25689999999999876 556799999
Q ss_pred HHHhcCCCeEEEEEe
Q 035840 73 KWVLKKPNGVIAAWT 87 (213)
Q Consensus 73 ~rvLk~pgG~l~~~~ 87 (213)
.++| |||.|++..
T Consensus 136 ~~lL--PGG~l~lS~ 148 (261)
T 3iv6_A 136 LSLV--GSGTVRASV 148 (261)
T ss_dssp HHHH--TTSEEEEEE
T ss_pred HHhC--cCcEEEEEe
Confidence 9998 599998764
No 101
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=98.86 E-value=7.1e-09 Score=80.58 Aligned_cols=76 Identities=17% Similarity=0.100 Sum_probs=60.7
Q ss_pred cccCCeEEEEeCCHHHHHHhhcC------C-CceEEecCCCCcchhhccCCCCCCceeeeeechhhccCChhHHHHHHHH
Q 035840 2 AKIYKNVIATDTSPKQLEFAIKL------P-NIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWFDLPQFYKQVKW 74 (213)
Q Consensus 2 a~~~~~V~gvD~S~~ml~~Ar~~------~-~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~d~~~~~~e~~r 74 (213)
|....+|+|+|+|+.|++.|++. + ++++..+++ .+......+||+|++..++ +.. +++++.+
T Consensus 74 a~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~-------~~~~~~~~~~D~v~~~~~~---~~~-~l~~~~~ 142 (204)
T 3njr_A 74 CLAGGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTA-------PAALADLPLPEAVFIGGGG---SQA-LYDRLWE 142 (204)
T ss_dssp HHTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCT-------TGGGTTSCCCSEEEECSCC---CHH-HHHHHHH
T ss_pred HHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCch-------hhhcccCCCCCEEEECCcc---cHH-HHHHHHH
Confidence 44567999999999999999973 4 788999888 4422233569999987754 777 9999999
Q ss_pred HhcCCCeEEEEEeCC
Q 035840 75 VLKKPNGVIAAWTYT 89 (213)
Q Consensus 75 vLk~pgG~l~~~~~~ 89 (213)
+|| |||.|++....
T Consensus 143 ~Lk-pgG~lv~~~~~ 156 (204)
T 3njr_A 143 WLA-PGTRIVANAVT 156 (204)
T ss_dssp HSC-TTCEEEEEECS
T ss_pred hcC-CCcEEEEEecC
Confidence 999 99999877655
No 102
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=98.86 E-value=3.5e-09 Score=82.78 Aligned_cols=74 Identities=19% Similarity=0.153 Sum_probs=53.1
Q ss_pred CeEEEEeCCHHHH----HHhhcCCCceEEecCCCCcchhhcc-CCCCCCceeeeeechhhccCChhHHHHHHHHHhcCCC
Q 035840 6 KNVIATDTSPKQL----EFAIKLPNIRYQLTPPTMSITELEQ-NVATQSSVDLVTIAAALHWFDLPQFYKQVKWVLKKPN 80 (213)
Q Consensus 6 ~~V~gvD~S~~ml----~~Ar~~~~v~~~~~~~~~~~~d~~~-~~~~~~sfDlV~~~~~~hw~d~~~~~~e~~rvLk~pg 80 (213)
++|+|+|+|+.|+ +.|++..++.+..+++.. ... .++. ++||+|++..+.+ -+...++.++.|+|| ||
T Consensus 82 ~~V~gvD~s~~~l~~~~~~a~~~~~v~~~~~d~~~----~~~~~~~~-~~fD~V~~~~~~~-~~~~~~l~~~~r~Lk-pg 154 (210)
T 1nt2_A 82 GIIYAVEYSAKPFEKLLELVRERNNIIPLLFDASK----PWKYSGIV-EKVDLIYQDIAQK-NQIEILKANAEFFLK-EK 154 (210)
T ss_dssp SEEEEECCCHHHHHHHHHHHHHCSSEEEECSCTTC----GGGTTTTC-CCEEEEEECCCST-THHHHHHHHHHHHEE-EE
T ss_pred CEEEEEECCHHHHHHHHHHHhcCCCeEEEEcCCCC----chhhcccc-cceeEEEEeccCh-hHHHHHHHHHHHHhC-CC
Confidence 6999999999865 555556788888887721 111 2444 7899999874322 123345899999999 99
Q ss_pred eEEEEE
Q 035840 81 GVIAAW 86 (213)
Q Consensus 81 G~l~~~ 86 (213)
|.|++.
T Consensus 155 G~l~i~ 160 (210)
T 1nt2_A 155 GEVVIM 160 (210)
T ss_dssp EEEEEE
T ss_pred CEEEEE
Confidence 999876
No 103
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=98.85 E-value=5.3e-10 Score=95.11 Aligned_cols=72 Identities=13% Similarity=0.079 Sum_probs=59.4
Q ss_pred CCeEEEEeCCHHHHHHhhcCCCceEEecCCCCcchhhccCCCC------CCceeeeeechhhccC-ChhHHHHHHHHHhc
Q 035840 5 YKNVIATDTSPKQLEFAIKLPNIRYQLTPPTMSITELEQNVAT------QSSVDLVTIAAALHWF-DLPQFYKQVKWVLK 77 (213)
Q Consensus 5 ~~~V~gvD~S~~ml~~Ar~~~~v~~~~~~~~~~~~d~~~~~~~------~~sfDlV~~~~~~hw~-d~~~~~~e~~rvLk 77 (213)
.++|+|+|+|+.|. ...++++|.++++ +++++. +++||+|++..+ |++ |...+|+++.|+||
T Consensus 247 ~a~V~GVDiSp~m~---~~~~rI~fv~GDa-------~dlpf~~~l~~~d~sFDlVisdgs-H~~~d~~~aL~el~rvLK 315 (419)
T 3sso_A 247 RGQIYGLDIMDKSH---VDELRIRTIQGDQ-------NDAEFLDRIARRYGPFDIVIDDGS-HINAHVRTSFAALFPHVR 315 (419)
T ss_dssp TCEEEEEESSCCGG---GCBTTEEEEECCT-------TCHHHHHHHHHHHCCEEEEEECSC-CCHHHHHHHHHHHGGGEE
T ss_pred CCEEEEEECCHHHh---hcCCCcEEEEecc-------cccchhhhhhcccCCccEEEECCc-ccchhHHHHHHHHHHhcC
Confidence 46999999999994 2346899999998 666665 689999998754 555 99999999999999
Q ss_pred CCCeEEEEEeC
Q 035840 78 KPNGVIAAWTY 88 (213)
Q Consensus 78 ~pgG~l~~~~~ 88 (213)
|||.|++.+.
T Consensus 316 -PGGvlVi~Dl 325 (419)
T 3sso_A 316 -PGGLYVIEDM 325 (419)
T ss_dssp -EEEEEEEECG
T ss_pred -CCeEEEEEec
Confidence 9999988643
No 104
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=98.84 E-value=5.9e-09 Score=82.31 Aligned_cols=67 Identities=21% Similarity=0.202 Sum_probs=55.5
Q ss_pred CeEEEEeCCHHHHHHhhc----CCCceEEecCCCCcchhhcc----CCCCCCceeeeeechhhccC-Ch---hHHHHHHH
Q 035840 6 KNVIATDTSPKQLEFAIK----LPNIRYQLTPPTMSITELEQ----NVATQSSVDLVTIAAALHWF-DL---PQFYKQVK 73 (213)
Q Consensus 6 ~~V~gvD~S~~ml~~Ar~----~~~v~~~~~~~~~~~~d~~~----~~~~~~sfDlV~~~~~~hw~-d~---~~~~~e~~ 73 (213)
++|+|+|+|+.|++.|++ .+++.+..+++ ++ .+++ ++||+|+ |.+ ++ ..++.++.
T Consensus 99 ~~v~gvD~s~~~~~~a~~~~~~~~~v~~~~~d~-------~~~~~~~~~~-~~~D~v~-----~~~~~~~~~~~~l~~~~ 165 (230)
T 1fbn_A 99 GIVYAIEYAPRIMRELLDACAERENIIPILGDA-------NKPQEYANIV-EKVDVIY-----EDVAQPNQAEILIKNAK 165 (230)
T ss_dssp SEEEEEESCHHHHHHHHHHTTTCTTEEEEECCT-------TCGGGGTTTS-CCEEEEE-----ECCCSTTHHHHHHHHHH
T ss_pred cEEEEEECCHHHHHHHHHHhhcCCCeEEEECCC-------CCcccccccC-ccEEEEE-----EecCChhHHHHHHHHHH
Confidence 799999999999998875 36788888887 44 5565 7899999 444 66 77799999
Q ss_pred HHhcCCCeEEEEE
Q 035840 74 WVLKKPNGVIAAW 86 (213)
Q Consensus 74 rvLk~pgG~l~~~ 86 (213)
|+|| |||.+++.
T Consensus 166 ~~Lk-pgG~l~i~ 177 (230)
T 1fbn_A 166 WFLK-KGGYGMIA 177 (230)
T ss_dssp HHEE-EEEEEEEE
T ss_pred HhCC-CCcEEEEE
Confidence 9999 99999875
No 105
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=98.82 E-value=4.1e-09 Score=81.69 Aligned_cols=75 Identities=13% Similarity=0.036 Sum_probs=61.3
Q ss_pred cccCCeEEEEeCCHHHHHHhhcC------CCceEEecCCCCcchhhccCCCCCCceeeeeechhhccCChhHHHHHHHHH
Q 035840 2 AKIYKNVIATDTSPKQLEFAIKL------PNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWFDLPQFYKQVKWV 75 (213)
Q Consensus 2 a~~~~~V~gvD~S~~ml~~Ar~~------~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~d~~~~~~e~~rv 75 (213)
++...+|+|+|+|+.|++.|++. +++++..+++ .+.+.++++||+|++..+++++.. ++.++
T Consensus 96 a~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~-------~~~~~~~~~~D~i~~~~~~~~~~~-----~~~~~ 163 (210)
T 3lbf_A 96 AHLVQHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDG-------WQGWQARAPFDAIIVTAAPPEIPT-----ALMTQ 163 (210)
T ss_dssp HHHSSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCG-------GGCCGGGCCEEEEEESSBCSSCCT-----HHHHT
T ss_pred HHhCCEEEEEecCHHHHHHHHHHHHHcCCCceEEEECCc-------ccCCccCCCccEEEEccchhhhhH-----HHHHh
Confidence 44578999999999999999972 5688888887 555556788999999999998842 68999
Q ss_pred hcCCCeEEEEEeCC
Q 035840 76 LKKPNGVIAAWTYT 89 (213)
Q Consensus 76 Lk~pgG~l~~~~~~ 89 (213)
|| |||.+++....
T Consensus 164 L~-pgG~lv~~~~~ 176 (210)
T 3lbf_A 164 LD-EGGILVLPVGE 176 (210)
T ss_dssp EE-EEEEEEEEECS
T ss_pred cc-cCcEEEEEEcC
Confidence 99 99999876544
No 106
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=98.81 E-value=2.5e-09 Score=83.47 Aligned_cols=73 Identities=18% Similarity=0.252 Sum_probs=57.3
Q ss_pred CCeEEEEeCCHHHHHHh----hc------CCCceEEecCCCCcchhhccCCCCCCceeeeeech---hh--ccC-ChhHH
Q 035840 5 YKNVIATDTSPKQLEFA----IK------LPNIRYQLTPPTMSITELEQNVATQSSVDLVTIAA---AL--HWF-DLPQF 68 (213)
Q Consensus 5 ~~~V~gvD~S~~ml~~A----r~------~~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~---~~--hw~-d~~~~ 68 (213)
..+|+|+|+|+.|++.+ ++ .+++++.++++ +++|+++++ |.|.... .. |++ |+..+
T Consensus 51 ~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~-------~~l~~~~~~-d~v~~~~~~~~~~~~~~~~~~~~ 122 (218)
T 3mq2_A 51 SRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATA-------ERLPPLSGV-GELHVLMPWGSLLRGVLGSSPEM 122 (218)
T ss_dssp TEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCS-------TTCCSCCCE-EEEEEESCCHHHHHHHHTSSSHH
T ss_pred CCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecch-------hhCCCCCCC-CEEEEEccchhhhhhhhccHHHH
Confidence 46999999999999862 22 25789999888 778888776 7766333 33 255 88999
Q ss_pred HHHHHHHhcCCCeEEEEE
Q 035840 69 YKQVKWVLKKPNGVIAAW 86 (213)
Q Consensus 69 ~~e~~rvLk~pgG~l~~~ 86 (213)
++++.|+|| |||.|++.
T Consensus 123 l~~~~~~Lk-pgG~l~~~ 139 (218)
T 3mq2_A 123 LRGMAAVCR-PGASFLVA 139 (218)
T ss_dssp HHHHHHTEE-EEEEEEEE
T ss_pred HHHHHHHcC-CCcEEEEE
Confidence 999999999 99999874
No 107
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=98.80 E-value=2.1e-09 Score=83.31 Aligned_cols=77 Identities=17% Similarity=0.066 Sum_probs=61.6
Q ss_pred CCeEEEEeCCHHHHHHhhcC--------CCceEEecCCCCcchhhccCC--CCCCc-eeeeeechhhccCChhHHHHHH-
Q 035840 5 YKNVIATDTSPKQLEFAIKL--------PNIRYQLTPPTMSITELEQNV--ATQSS-VDLVTIAAALHWFDLPQFYKQV- 72 (213)
Q Consensus 5 ~~~V~gvD~S~~ml~~Ar~~--------~~v~~~~~~~~~~~~d~~~~~--~~~~s-fDlV~~~~~~hw~d~~~~~~e~- 72 (213)
+.+|+|+|+|+.|++.|++. +++++..+++ .++. +++++ ||+|++...++.-+...++.++
T Consensus 76 ~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~-------~~~~~~~~~~~~fD~I~~~~~~~~~~~~~~l~~~~ 148 (201)
T 2ift_A 76 AKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSS-------LDFLKQPQNQPHFDVVFLDPPFHFNLAEQAISLLC 148 (201)
T ss_dssp CSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCH-------HHHTTSCCSSCCEEEEEECCCSSSCHHHHHHHHHH
T ss_pred CCEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCH-------HHHHHhhccCCCCCEEEECCCCCCccHHHHHHHHH
Confidence 46899999999999999972 4678888876 4432 24678 9999998887755788899999
Q ss_pred -HHHhcCCCeEEEEEeCC
Q 035840 73 -KWVLKKPNGVIAAWTYT 89 (213)
Q Consensus 73 -~rvLk~pgG~l~~~~~~ 89 (213)
.|+|| |||.+++.+..
T Consensus 149 ~~~~Lk-pgG~l~i~~~~ 165 (201)
T 2ift_A 149 ENNWLK-PNALIYVETEK 165 (201)
T ss_dssp HTTCEE-EEEEEEEEEES
T ss_pred hcCccC-CCcEEEEEECC
Confidence 67899 99999876544
No 108
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=98.78 E-value=8e-09 Score=80.08 Aligned_cols=77 Identities=10% Similarity=-0.034 Sum_probs=62.5
Q ss_pred CCeEEEEeCCHHHHHHhhcC------CCceEEecCCCCcchhhcc-CCCCCCceeeeeechhhccCChhHHHHHHHH--H
Q 035840 5 YKNVIATDTSPKQLEFAIKL------PNIRYQLTPPTMSITELEQ-NVATQSSVDLVTIAAALHWFDLPQFYKQVKW--V 75 (213)
Q Consensus 5 ~~~V~gvD~S~~ml~~Ar~~------~~v~~~~~~~~~~~~d~~~-~~~~~~sfDlV~~~~~~hw~d~~~~~~e~~r--v 75 (213)
+.+|+|+|+|+.|++.|++. +++++..+++ .+ ++..+++||+|++...+|+-+...+++++.+ +
T Consensus 77 ~~~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~-------~~~~~~~~~~fD~V~~~~p~~~~~~~~~l~~l~~~~~ 149 (202)
T 2fpo_A 77 AAGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNA-------MSFLAQKGTPHNIVFVDPPFRRGLLEETINLLEDNGW 149 (202)
T ss_dssp CSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCH-------HHHHSSCCCCEEEEEECCSSSTTTHHHHHHHHHHTTC
T ss_pred CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCH-------HHHHhhcCCCCCEEEECCCCCCCcHHHHHHHHHhcCc
Confidence 45999999999999999972 4788888877 44 4556778999999888776688889999976 5
Q ss_pred hcCCCeEEEEEeCC
Q 035840 76 LKKPNGVIAAWTYT 89 (213)
Q Consensus 76 Lk~pgG~l~~~~~~ 89 (213)
|| |||.|++.+..
T Consensus 150 L~-pgG~l~i~~~~ 162 (202)
T 2fpo_A 150 LA-DEALIYVESEV 162 (202)
T ss_dssp EE-EEEEEEEEEEG
T ss_pred cC-CCcEEEEEECC
Confidence 99 99999876544
No 109
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=98.76 E-value=7.3e-09 Score=86.81 Aligned_cols=70 Identities=20% Similarity=0.123 Sum_probs=59.2
Q ss_pred CeEEEEeCCHHHHHHhhcC-------CCceEEecCCCCcchhhccCCCCCCceeeeeech---hhccC-ChhHHHHHHHH
Q 035840 6 KNVIATDTSPKQLEFAIKL-------PNIRYQLTPPTMSITELEQNVATQSSVDLVTIAA---ALHWF-DLPQFYKQVKW 74 (213)
Q Consensus 6 ~~V~gvD~S~~ml~~Ar~~-------~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~---~~hw~-d~~~~~~e~~r 74 (213)
.+|+|+|+|+ |++.|++. +++++..+++ +++++++++||+|++.. .+++. +...++.++.|
T Consensus 88 ~~v~gvD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~-------~~~~~~~~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~ 159 (340)
T 2fyt_A 88 KKVLGVDQSE-ILYQAMDIIRLNKLEDTITLIKGKI-------EEVHLPVEKVDVIISEWMGYFLLFESMLDSVLYAKNK 159 (340)
T ss_dssp SEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCT-------TTSCCSCSCEEEEEECCCBTTBTTTCHHHHHHHHHHH
T ss_pred CEEEEEChHH-HHHHHHHHHHHcCCCCcEEEEEeeH-------HHhcCCCCcEEEEEEcCchhhccCHHHHHHHHHHHHh
Confidence 4899999997 99999872 5788999888 77788888999999865 45555 67789999999
Q ss_pred HhcCCCeEEE
Q 035840 75 VLKKPNGVIA 84 (213)
Q Consensus 75 vLk~pgG~l~ 84 (213)
+|| |||.++
T Consensus 160 ~Lk-pgG~li 168 (340)
T 2fyt_A 160 YLA-KGGSVY 168 (340)
T ss_dssp HEE-EEEEEE
T ss_pred hcC-CCcEEE
Confidence 999 999986
No 110
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=98.76 E-value=1.2e-08 Score=80.18 Aligned_cols=76 Identities=17% Similarity=0.147 Sum_probs=59.3
Q ss_pred CCeEEEEeCCHHHHHHhhcC-----CCceEEecCCCCcchhhccCCCCCCceeeeeechhhccCC---------------
Q 035840 5 YKNVIATDTSPKQLEFAIKL-----PNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWFD--------------- 64 (213)
Q Consensus 5 ~~~V~gvD~S~~ml~~Ar~~-----~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~d--------------- 64 (213)
..+|+|+|+|+.|++.|++. .++++..+++. ...++++++||+|++.-.+++..
T Consensus 79 ~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~------~~~~~~~~~fD~I~~npp~~~~~~~~~~~~~~~~~~~~ 152 (230)
T 3evz_A 79 NCKVTATEVDEEFFEYARRNIERNNSNVRLVKSNGG------IIKGVVEGTFDVIFSAPPYYDKPLGRVLTEREAIGGGK 152 (230)
T ss_dssp CCEEEEEECCHHHHHHHHHHHHHTTCCCEEEECSSC------SSTTTCCSCEEEEEECCCCC---------------CCS
T ss_pred CCEEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCch------hhhhcccCceeEEEECCCCcCCccccccChhhhhccCc
Confidence 57999999999999999972 26888888862 11245578999999987776652
Q ss_pred -----hhHHHHHHHHHhcCCCeEEEEEe
Q 035840 65 -----LPQFYKQVKWVLKKPNGVIAAWT 87 (213)
Q Consensus 65 -----~~~~~~e~~rvLk~pgG~l~~~~ 87 (213)
...++.++.++|| |||.+++..
T Consensus 153 ~~~~~~~~~l~~~~~~Lk-pgG~l~~~~ 179 (230)
T 3evz_A 153 YGEEFSVKLLEEAFDHLN-PGGKVALYL 179 (230)
T ss_dssp SSCHHHHHHHHHHGGGEE-EEEEEEEEE
T ss_pred cchHHHHHHHHHHHHHhC-CCeEEEEEe
Confidence 3788999999999 999998754
No 111
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=98.76 E-value=7.2e-09 Score=79.49 Aligned_cols=76 Identities=16% Similarity=0.109 Sum_probs=60.6
Q ss_pred CeEEEEeCCHHHHHHhhcC-------CCceEEecCCCCcchhhccCC-CCCCceeeeeechhh-----ccC-----ChhH
Q 035840 6 KNVIATDTSPKQLEFAIKL-------PNIRYQLTPPTMSITELEQNV-ATQSSVDLVTIAAAL-----HWF-----DLPQ 67 (213)
Q Consensus 6 ~~V~gvD~S~~ml~~Ar~~-------~~v~~~~~~~~~~~~d~~~~~-~~~~sfDlV~~~~~~-----hw~-----d~~~ 67 (213)
++|+|+|+|+.|++.|++. +++++..+++ ++++ +.+++||+|++...+ +++ +...
T Consensus 48 ~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~-------~~~~~~~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~ 120 (197)
T 3eey_A 48 GRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGH-------QNMDKYIDCPVKAVMFNLGYLPSGDHSISTRPETTIQ 120 (197)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCG-------GGGGGTCCSCEEEEEEEESBCTTSCTTCBCCHHHHHH
T ss_pred CEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCH-------HHHhhhccCCceEEEEcCCcccCcccccccCcccHHH
Confidence 5999999999999999973 4688888887 5544 556889999988765 111 3357
Q ss_pred HHHHHHHHhcCCCeEEEEEeCC
Q 035840 68 FYKQVKWVLKKPNGVIAAWTYT 89 (213)
Q Consensus 68 ~~~e~~rvLk~pgG~l~~~~~~ 89 (213)
++.++.++|| |||.+++..+.
T Consensus 121 ~l~~~~~~Lk-~gG~l~~~~~~ 141 (197)
T 3eey_A 121 ALSKAMELLV-TGGIITVVIYY 141 (197)
T ss_dssp HHHHHHHHEE-EEEEEEEEECC
T ss_pred HHHHHHHhCc-CCCEEEEEEcc
Confidence 9999999999 99999887664
No 112
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=98.75 E-value=1.6e-08 Score=84.92 Aligned_cols=71 Identities=20% Similarity=0.222 Sum_probs=59.2
Q ss_pred CCeEEEEeCCHHHHHHhhcC-------CCceEEecCCCCcchhhccCCCCCCceeeeeechh---hccC-ChhHHHHHHH
Q 035840 5 YKNVIATDTSPKQLEFAIKL-------PNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAA---LHWF-DLPQFYKQVK 73 (213)
Q Consensus 5 ~~~V~gvD~S~~ml~~Ar~~-------~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~---~hw~-d~~~~~~e~~ 73 (213)
..+|+|+|+|+ |++.|++. .++++..+++ +++++++++||+|++... +++. +...++.++.
T Consensus 89 ~~~v~gvD~s~-~l~~a~~~~~~~~~~~~v~~~~~d~-------~~~~~~~~~fD~Iis~~~~~~l~~~~~~~~~l~~~~ 160 (349)
T 3q7e_A 89 ARKVIGIECSS-ISDYAVKIVKANKLDHVVTIIKGKV-------EEVELPVEKVDIIISEWMGYCLFYESMLNTVLHARD 160 (349)
T ss_dssp CSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCT-------TTCCCSSSCEEEEEECCCBBTBTBTCCHHHHHHHHH
T ss_pred CCEEEEECcHH-HHHHHHHHHHHcCCCCcEEEEECcH-------HHccCCCCceEEEEEccccccccCchhHHHHHHHHH
Confidence 34999999995 99999972 2388999888 777888899999998654 4444 8889999999
Q ss_pred HHhcCCCeEEE
Q 035840 74 WVLKKPNGVIA 84 (213)
Q Consensus 74 rvLk~pgG~l~ 84 (213)
|+|| |||.++
T Consensus 161 r~Lk-pgG~li 170 (349)
T 3q7e_A 161 KWLA-PDGLIF 170 (349)
T ss_dssp HHEE-EEEEEE
T ss_pred HhCC-CCCEEc
Confidence 9999 999986
No 113
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=98.74 E-value=3.5e-09 Score=90.42 Aligned_cols=76 Identities=8% Similarity=-0.022 Sum_probs=61.4
Q ss_pred CeEEEEeCCHHHHHHhhc---------------CCCceEEecCCCCcchhhccCCCCC--CceeeeeechhhccCChhHH
Q 035840 6 KNVIATDTSPKQLEFAIK---------------LPNIRYQLTPPTMSITELEQNVATQ--SSVDLVTIAAALHWFDLPQF 68 (213)
Q Consensus 6 ~~V~gvD~S~~ml~~Ar~---------------~~~v~~~~~~~~~~~~d~~~~~~~~--~sfDlV~~~~~~hw~d~~~~ 68 (213)
.+|+|||+|+.|++.|++ ..+++|+++|+ .+.++++ .+||+|+++..+++-+...+
T Consensus 198 ~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~GD~-------~~lp~~d~~~~aDVVf~Nn~~F~pdl~~a 270 (438)
T 3uwp_A 198 KHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDF-------LSEEWRERIANTSVIFVNNFAFGPEVDHQ 270 (438)
T ss_dssp SEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEECCT-------TSHHHHHHHHTCSEEEECCTTCCHHHHHH
T ss_pred CEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEECcc-------cCCccccccCCccEEEEcccccCchHHHH
Confidence 469999999999999875 14688888887 5555543 46999998877666699999
Q ss_pred HHHHHHHhcCCCeEEEEEeCC
Q 035840 69 YKQVKWVLKKPNGVIAAWTYT 89 (213)
Q Consensus 69 ~~e~~rvLk~pgG~l~~~~~~ 89 (213)
+.+++|+|| |||+|++....
T Consensus 271 L~Ei~RvLK-PGGrIVssE~f 290 (438)
T 3uwp_A 271 LKERFANMK-EGGRIVSSKPF 290 (438)
T ss_dssp HHHHHTTSC-TTCEEEESSCS
T ss_pred HHHHHHcCC-CCcEEEEeecc
Confidence 999999999 99999876443
No 114
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=98.73 E-value=1.8e-08 Score=80.30 Aligned_cols=73 Identities=19% Similarity=0.266 Sum_probs=62.0
Q ss_pred CCeEEEEeCCHHHHHHhhcC-------CCceEEecCCCCcchhhccCCCCCCceeeeeechhhccCChhHHHHHHHHHhc
Q 035840 5 YKNVIATDTSPKQLEFAIKL-------PNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWFDLPQFYKQVKWVLK 77 (213)
Q Consensus 5 ~~~V~gvD~S~~ml~~Ar~~-------~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~d~~~~~~e~~rvLk 77 (213)
..+|+|+|+|+.|++.|++. +++++..+++ .+.++++++||+|++ ++-++..++.++.++||
T Consensus 121 ~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~-------~~~~~~~~~~D~v~~----~~~~~~~~l~~~~~~L~ 189 (258)
T 2pwy_A 121 KGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKL-------EEAELEEAAYDGVAL----DLMEPWKVLEKAALALK 189 (258)
T ss_dssp TSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCG-------GGCCCCTTCEEEEEE----ESSCGGGGHHHHHHHEE
T ss_pred CCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECch-------hhcCCCCCCcCEEEE----CCcCHHHHHHHHHHhCC
Confidence 57999999999999999873 4678888777 666788889999997 44588899999999999
Q ss_pred CCCeEEEEEeCC
Q 035840 78 KPNGVIAAWTYT 89 (213)
Q Consensus 78 ~pgG~l~~~~~~ 89 (213)
|||.+++....
T Consensus 190 -~gG~l~~~~~~ 200 (258)
T 2pwy_A 190 -PDRFLVAYLPN 200 (258)
T ss_dssp -EEEEEEEEESC
T ss_pred -CCCEEEEEeCC
Confidence 99999887654
No 115
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=98.73 E-value=1.3e-08 Score=86.11 Aligned_cols=72 Identities=24% Similarity=0.221 Sum_probs=61.8
Q ss_pred CeEEEEeCCHHHHHHhhcCCCceEEecCCCCcchhhccCCCCCCceeeeeechhhccC-Chh--HHHHHHHHHhcCCCeE
Q 035840 6 KNVIATDTSPKQLEFAIKLPNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWF-DLP--QFYKQVKWVLKKPNGV 82 (213)
Q Consensus 6 ~~V~gvD~S~~ml~~Ar~~~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~-d~~--~~~~e~~rvLk~pgG~ 82 (213)
.+++++|+ +.|++.|++.+++++..+++ .+ ++++ ||+|++..++|++ |.. .++++++|+|| |||.
T Consensus 234 ~~~~~~D~-~~~~~~a~~~~~v~~~~~d~-------~~-~~~~--~D~v~~~~~lh~~~d~~~~~~l~~~~~~L~-pgG~ 301 (372)
T 1fp1_D 234 IKGINFDL-PQVIENAPPLSGIEHVGGDM-------FA-SVPQ--GDAMILKAVCHNWSDEKCIEFLSNCHKALS-PNGK 301 (372)
T ss_dssp CEEEEEEC-HHHHTTCCCCTTEEEEECCT-------TT-CCCC--EEEEEEESSGGGSCHHHHHHHHHHHHHHEE-EEEE
T ss_pred CeEEEeCh-HHHHHhhhhcCCCEEEeCCc-------cc-CCCC--CCEEEEecccccCCHHHHHHHHHHHHHhcC-CCCE
Confidence 37888999 99999999888899999887 44 5554 9999999999977 666 99999999999 9999
Q ss_pred EEEEeCC
Q 035840 83 IAAWTYT 89 (213)
Q Consensus 83 l~~~~~~ 89 (213)
|++....
T Consensus 302 l~i~e~~ 308 (372)
T 1fp1_D 302 VIIVEFI 308 (372)
T ss_dssp EEEEEEE
T ss_pred EEEEEec
Confidence 9887544
No 116
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=98.73 E-value=6.7e-09 Score=82.07 Aligned_cols=75 Identities=15% Similarity=0.115 Sum_probs=55.0
Q ss_pred cCCeEEEEeCC-HHHHHHh---hc------CCCceEEecCCCCcchhhccCCCC-CCceeeeeechhh-----ccC-Chh
Q 035840 4 IYKNVIATDTS-PKQLEFA---IK------LPNIRYQLTPPTMSITELEQNVAT-QSSVDLVTIAAAL-----HWF-DLP 66 (213)
Q Consensus 4 ~~~~V~gvD~S-~~ml~~A---r~------~~~v~~~~~~~~~~~~d~~~~~~~-~~sfDlV~~~~~~-----hw~-d~~ 66 (213)
...+|+|+|+| +.|++.| ++ .++++|..+++ +++|.. .+.+|.|++...+ |+. +..
T Consensus 47 ~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~-------~~l~~~~~d~v~~i~~~~~~~~~~~~~~~~~~ 119 (225)
T 3p2e_A 47 QNTFYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAA-------ESLPFELKNIADSISILFPWGTLLEYVIKPNR 119 (225)
T ss_dssp TTEEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBT-------TBCCGGGTTCEEEEEEESCCHHHHHHHHTTCH
T ss_pred CCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCH-------HHhhhhccCeEEEEEEeCCCcHHhhhhhcchH
Confidence 35689999999 8888887 54 25788988888 555421 2557777665432 223 667
Q ss_pred HHHHHHHHHhcCCCeEEEEE
Q 035840 67 QFYKQVKWVLKKPNGVIAAW 86 (213)
Q Consensus 67 ~~~~e~~rvLk~pgG~l~~~ 86 (213)
.++++++|+|| |||.|++.
T Consensus 120 ~~l~~~~r~Lk-pGG~l~i~ 138 (225)
T 3p2e_A 120 DILSNVADLAK-KEAHFEFV 138 (225)
T ss_dssp HHHHHHHTTEE-EEEEEEEE
T ss_pred HHHHHHHHhcC-CCcEEEEE
Confidence 89999999999 99999873
No 117
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=98.70 E-value=2.8e-08 Score=74.91 Aligned_cols=74 Identities=18% Similarity=0.045 Sum_probs=61.3
Q ss_pred cccCCeEEEEeCCHHHHHHhhcCCCceEEecCCCCcchhhccCCCCCCceeeeeechhhccC-Ch---------hHHHHH
Q 035840 2 AKIYKNVIATDTSPKQLEFAIKLPNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWF-DL---------PQFYKQ 71 (213)
Q Consensus 2 a~~~~~V~gvD~S~~ml~~Ar~~~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~-d~---------~~~~~e 71 (213)
++.+ +|+|+|+|+.|++. .+++++.++++ .+ ++++++||+|+++..+||. +. ...+.+
T Consensus 42 ~~~~-~v~gvD~s~~~~~~---~~~~~~~~~d~-------~~-~~~~~~fD~i~~n~~~~~~~~~~~~~~~~~~~~~~~~ 109 (170)
T 3q87_B 42 RKRN-TVVSTDLNIRALES---HRGGNLVRADL-------LC-SINQESVDVVVFNPPYVPDTDDPIIGGGYLGREVIDR 109 (170)
T ss_dssp TTTS-EEEEEESCHHHHHT---CSSSCEEECST-------TT-TBCGGGCSEEEECCCCBTTCCCTTTBCCGGGCHHHHH
T ss_pred HhcC-cEEEEECCHHHHhc---ccCCeEEECCh-------hh-hcccCCCCEEEECCCCccCCccccccCCcchHHHHHH
Confidence 5566 99999999999998 46788999887 54 5677899999999999987 33 678899
Q ss_pred HHHHhcCCCeEEEEEeCC
Q 035840 72 VKWVLKKPNGVIAAWTYT 89 (213)
Q Consensus 72 ~~rvLk~pgG~l~~~~~~ 89 (213)
+.+.| |||.+++....
T Consensus 110 ~~~~l--pgG~l~~~~~~ 125 (170)
T 3q87_B 110 FVDAV--TVGMLYLLVIE 125 (170)
T ss_dssp HHHHC--CSSEEEEEEEG
T ss_pred HHhhC--CCCEEEEEEec
Confidence 99999 59999876544
No 118
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=98.70 E-value=4.5e-08 Score=81.36 Aligned_cols=75 Identities=12% Similarity=0.019 Sum_probs=62.1
Q ss_pred CeEEEEeCCHHHHHHhhcC-------CCceEEecCCCCcchhhccCCCCCCceeeeeechhhccC-Ch--hHHHHHHHHH
Q 035840 6 KNVIATDTSPKQLEFAIKL-------PNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWF-DL--PQFYKQVKWV 75 (213)
Q Consensus 6 ~~V~gvD~S~~ml~~Ar~~-------~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~-d~--~~~~~e~~rv 75 (213)
.+++++|+ +.|++.|++. ++++|..++. . .+++. +||+|++..++|.+ |. .+++++++++
T Consensus 194 ~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~-------~-~~~p~-~~D~v~~~~vlh~~~~~~~~~~l~~~~~~ 263 (332)
T 3i53_A 194 LSGTVLDL-QGPASAAHRRFLDTGLSGRAQVVVGSF-------F-DPLPA-GAGGYVLSAVLHDWDDLSAVAILRRCAEA 263 (332)
T ss_dssp CEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCT-------T-SCCCC-SCSEEEEESCGGGSCHHHHHHHHHHHHHH
T ss_pred CeEEEecC-HHHHHHHHHhhhhcCcCcCeEEecCCC-------C-CCCCC-CCcEEEEehhhccCCHHHHHHHHHHHHHh
Confidence 47999999 9999999962 5689999887 3 24554 79999999999966 43 7999999999
Q ss_pred hcCCCeEEEEEeCCCC
Q 035840 76 LKKPNGVIAAWTYTMP 91 (213)
Q Consensus 76 Lk~pgG~l~~~~~~~~ 91 (213)
|| |||.|++.....+
T Consensus 264 L~-pgG~l~i~e~~~~ 278 (332)
T 3i53_A 264 AG-SGGVVLVIEAVAG 278 (332)
T ss_dssp HT-TTCEEEEEECCCC
T ss_pred cC-CCCEEEEEeecCC
Confidence 99 9999998876533
No 119
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=98.69 E-value=3.4e-08 Score=83.31 Aligned_cols=76 Identities=17% Similarity=0.114 Sum_probs=61.9
Q ss_pred CeEEEEeCCHHHHHHhhcC-------CCceEEecCCCCcchhhccC--CCCCCceeeeeechhhccC-Ch--hHHHHHHH
Q 035840 6 KNVIATDTSPKQLEFAIKL-------PNIRYQLTPPTMSITELEQN--VATQSSVDLVTIAAALHWF-DL--PQFYKQVK 73 (213)
Q Consensus 6 ~~V~gvD~S~~ml~~Ar~~-------~~v~~~~~~~~~~~~d~~~~--~~~~~sfDlV~~~~~~hw~-d~--~~~~~e~~ 73 (213)
.+|+|+|+ |.|++.|++. ++++|..+++ .+. |++ ++||+|++..++|.+ |. .+++++++
T Consensus 204 ~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~-------~~~~~~~p-~~~D~v~~~~vlh~~~~~~~~~~l~~~~ 274 (363)
T 3dp7_A 204 VEVTIVDL-PQQLEMMRKQTAGLSGSERIHGHGANL-------LDRDVPFP-TGFDAVWMSQFLDCFSEEEVISILTRVA 274 (363)
T ss_dssp CEEEEEEC-HHHHHHHHHHHTTCTTGGGEEEEECCC-------CSSSCCCC-CCCSEEEEESCSTTSCHHHHHHHHHHHH
T ss_pred CEEEEEeC-HHHHHHHHHHHHhcCcccceEEEEccc-------cccCCCCC-CCcCEEEEechhhhCCHHHHHHHHHHHH
Confidence 48999999 9999999973 3688999887 443 455 789999999999855 43 57899999
Q ss_pred HHhcCCCeEEEEEeCCCC
Q 035840 74 WVLKKPNGVIAAWTYTMP 91 (213)
Q Consensus 74 rvLk~pgG~l~~~~~~~~ 91 (213)
|+|| |||+|++.+...+
T Consensus 275 ~~L~-pgG~l~i~e~~~~ 291 (363)
T 3dp7_A 275 QSIG-KDSKVYIMETLWD 291 (363)
T ss_dssp HHCC-TTCEEEEEECCTT
T ss_pred HhcC-CCcEEEEEeeccC
Confidence 9999 9999998776533
No 120
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=98.69 E-value=2.7e-08 Score=83.43 Aligned_cols=72 Identities=19% Similarity=0.175 Sum_probs=61.7
Q ss_pred CeEEEEeCCHHHHHHhhcCCCceEEecCCCCcchhhccCCCCCCceeeeeechhhccC-Chh--HHHHHHHHHhcCC---
Q 035840 6 KNVIATDTSPKQLEFAIKLPNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWF-DLP--QFYKQVKWVLKKP--- 79 (213)
Q Consensus 6 ~~V~gvD~S~~ml~~Ar~~~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~-d~~--~~~~e~~rvLk~p--- 79 (213)
.+|+|+|+ +.|++.|++.+++++..+++ .+ ++++ ||+|++..++|.+ |.. ++++++.|+|| |
T Consensus 213 ~~~~~~D~-~~~~~~a~~~~~v~~~~~d~-------~~-~~p~--~D~v~~~~~lh~~~d~~~~~~l~~~~~~L~-p~~~ 280 (352)
T 1fp2_A 213 LKCIVFDR-PQVVENLSGSNNLTYVGGDM-------FT-SIPN--ADAVLLKYILHNWTDKDCLRILKKCKEAVT-NDGK 280 (352)
T ss_dssp CEEEEEEC-HHHHTTCCCBTTEEEEECCT-------TT-CCCC--CSEEEEESCGGGSCHHHHHHHHHHHHHHHS-GGGC
T ss_pred CeEEEeeC-HHHHhhcccCCCcEEEeccc-------cC-CCCC--ccEEEeehhhccCCHHHHHHHHHHHHHhCC-CCCC
Confidence 48999999 99999999888899999887 43 4543 9999999999955 666 99999999999 9
Q ss_pred CeEEEEEeCC
Q 035840 80 NGVIAAWTYT 89 (213)
Q Consensus 80 gG~l~~~~~~ 89 (213)
||+|++....
T Consensus 281 gG~l~i~e~~ 290 (352)
T 1fp2_A 281 RGKVTIIDMV 290 (352)
T ss_dssp CCEEEEEECE
T ss_pred CcEEEEEEee
Confidence 9999887664
No 121
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=98.69 E-value=7.9e-09 Score=77.09 Aligned_cols=73 Identities=16% Similarity=0.141 Sum_probs=60.4
Q ss_pred CeEEEEeCCHHHHHHhhcCCCceEEecCCCCcchhhccCC--------CCCCceeeeeechhhccC-Ch-----------
Q 035840 6 KNVIATDTSPKQLEFAIKLPNIRYQLTPPTMSITELEQNV--------ATQSSVDLVTIAAALHWF-DL----------- 65 (213)
Q Consensus 6 ~~V~gvD~S~~ml~~Ar~~~~v~~~~~~~~~~~~d~~~~~--------~~~~sfDlV~~~~~~hw~-d~----------- 65 (213)
.+|+|+|+|+ |++. +++++..+++ .+.+ +++++||+|++...+||+ +.
T Consensus 48 ~~v~~~D~~~-~~~~----~~~~~~~~d~-------~~~~~~~~~~~~~~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~ 115 (180)
T 1ej0_A 48 GRIIACDLLP-MDPI----VGVDFLQGDF-------RDELVMKALLERVGDSKVQVVMSDMAPNMSGTPAVDIPRAMYLV 115 (180)
T ss_dssp CEEEEEESSC-CCCC----TTEEEEESCT-------TSHHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHH
T ss_pred CeEEEEECcc-cccc----CcEEEEEccc-------ccchhhhhhhccCCCCceeEEEECCCccccCCCccchHHHHHHH
Confidence 6999999999 8654 6788888887 4444 667899999999999988 55
Q ss_pred hHHHHHHHHHhcCCCeEEEEEeCCCC
Q 035840 66 PQFYKQVKWVLKKPNGVIAAWTYTMP 91 (213)
Q Consensus 66 ~~~~~e~~rvLk~pgG~l~~~~~~~~ 91 (213)
..++.++.++|| |||.+++..+...
T Consensus 116 ~~~l~~~~~~L~-~gG~l~~~~~~~~ 140 (180)
T 1ej0_A 116 ELALEMCRDVLA-PGGSFVVKVFQGE 140 (180)
T ss_dssp HHHHHHHHHHEE-EEEEEEEEEESST
T ss_pred HHHHHHHHHHcC-CCcEEEEEEecCC
Confidence 689999999999 9999987665543
No 122
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=98.68 E-value=1.5e-08 Score=84.97 Aligned_cols=87 Identities=9% Similarity=0.064 Sum_probs=64.5
Q ss_pred CeEEEEeCCHHHHHHhhcC-----CCceEEecCCCCcchhhccCCCCCCceeeeeechhhcc-----C-ChhHHHHHHHH
Q 035840 6 KNVIATDTSPKQLEFAIKL-----PNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHW-----F-DLPQFYKQVKW 74 (213)
Q Consensus 6 ~~V~gvD~S~~ml~~Ar~~-----~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw-----~-d~~~~~~e~~r 74 (213)
.+|+|+|+|+.|++.|++. .++++..+++ .+ +.+++||+|+++..+|+ . +...++.++.|
T Consensus 221 ~~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~~d~-------~~--~~~~~fD~Iv~~~~~~~g~~~~~~~~~~~l~~~~~ 291 (343)
T 2pjd_A 221 IRLTLCDVSAPAVEASRATLAANGVEGEVFASNV-------FS--EVKGRFDMIISNPPFHDGMQTSLDAAQTLIRGAVR 291 (343)
T ss_dssp CBCEEEESBHHHHHHHHHHHHHTTCCCEEEECST-------TT--TCCSCEEEEEECCCCCSSSHHHHHHHHHHHHHHGG
T ss_pred CEEEEEECCHHHHHHHHHHHHHhCCCCEEEEccc-------cc--cccCCeeEEEECCCcccCccCCHHHHHHHHHHHHH
Confidence 4899999999999999973 2356666665 43 33678999999999986 2 56889999999
Q ss_pred HhcCCCeEEEEEeCCCCCcChHHHHhcc
Q 035840 75 VLKKPNGVIAAWTYTMPEINESVGAVFK 102 (213)
Q Consensus 75 vLk~pgG~l~~~~~~~~~~~~~~~~~~~ 102 (213)
+|| |||.+++.........+.+...+.
T Consensus 292 ~Lk-pgG~l~i~~~~~~~~~~~l~~~f~ 318 (343)
T 2pjd_A 292 HLN-SGGELRIVANAFLPYPDVLDETFG 318 (343)
T ss_dssp GEE-EEEEEEEEEETTSSHHHHHHHHHS
T ss_pred hCC-CCcEEEEEEcCCCCcHHHHHHhcC
Confidence 999 999998876554332233444433
No 123
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=98.68 E-value=1.4e-08 Score=83.12 Aligned_cols=75 Identities=19% Similarity=0.122 Sum_probs=53.8
Q ss_pred CCeEEEEeCCHHHHHHh-hcCCCceEEe-cCCCCcchhhccCCCCCCceeeeeechhhccCChhHHHHHHHHHhcCCCeE
Q 035840 5 YKNVIATDTSPKQLEFA-IKLPNIRYQL-TPPTMSITELEQNVATQSSVDLVTIAAALHWFDLPQFYKQVKWVLKKPNGV 82 (213)
Q Consensus 5 ~~~V~gvD~S~~ml~~A-r~~~~v~~~~-~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~d~~~~~~e~~rvLk~pgG~ 82 (213)
.++|+|+|+|++|++.+ ++.+.+.... .++..+ +.++ ++..+||+|++..+||+ ...++++++|+|| |||.
T Consensus 108 a~~V~aVDvs~~mL~~a~r~~~rv~~~~~~ni~~l--~~~~--l~~~~fD~v~~d~sf~s--l~~vL~e~~rvLk-pGG~ 180 (291)
T 3hp7_A 108 AKLVYAVDVGTNQLVWKLRQDDRVRSMEQYNFRYA--EPVD--FTEGLPSFASIDVSFIS--LNLILPALAKILV-DGGQ 180 (291)
T ss_dssp CSEEEEECSSSSCSCHHHHTCTTEEEECSCCGGGC--CGGG--CTTCCCSEEEECCSSSC--GGGTHHHHHHHSC-TTCE
T ss_pred CCEEEEEECCHHHHHHHHHhCcccceecccCceec--chhh--CCCCCCCEEEEEeeHhh--HHHHHHHHHHHcC-cCCE
Confidence 35999999999999995 4345543332 233111 1122 34557999999888875 5899999999999 9999
Q ss_pred EEEE
Q 035840 83 IAAW 86 (213)
Q Consensus 83 l~~~ 86 (213)
|++.
T Consensus 181 lv~l 184 (291)
T 3hp7_A 181 VVAL 184 (291)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9875
No 124
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=98.68 E-value=1.5e-08 Score=79.63 Aligned_cols=75 Identities=21% Similarity=0.171 Sum_probs=59.8
Q ss_pred cccCCeEEEEeCCHHHHHHhhcC----CCceEEecCCCCcchhhccCCCCCCceeeeeechhhccCChhHHHHHHHHHhc
Q 035840 2 AKIYKNVIATDTSPKQLEFAIKL----PNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWFDLPQFYKQVKWVLK 77 (213)
Q Consensus 2 a~~~~~V~gvD~S~~ml~~Ar~~----~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~d~~~~~~e~~rvLk 77 (213)
+..+.+|+|+|+|+.|++.|++. .++++..+++ .+....+++||+|++..++|++. .++.++||
T Consensus 89 ~~~~~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~d~-------~~~~~~~~~fD~v~~~~~~~~~~-----~~~~~~L~ 156 (231)
T 1vbf_A 89 AEIVDKVVSVEINEKMYNYASKLLSYYNNIKLILGDG-------TLGYEEEKPYDRVVVWATAPTLL-----CKPYEQLK 156 (231)
T ss_dssp HHHSSEEEEEESCHHHHHHHHHHHTTCSSEEEEESCG-------GGCCGGGCCEEEEEESSBBSSCC-----HHHHHTEE
T ss_pred HHHcCEEEEEeCCHHHHHHHHHHHhhcCCeEEEECCc-------ccccccCCCccEEEECCcHHHHH-----HHHHHHcC
Confidence 34567999999999999999973 2688888877 44223467899999999998874 37999999
Q ss_pred CCCeEEEEEeCC
Q 035840 78 KPNGVIAAWTYT 89 (213)
Q Consensus 78 ~pgG~l~~~~~~ 89 (213)
|||.+++....
T Consensus 157 -pgG~l~~~~~~ 167 (231)
T 1vbf_A 157 -EGGIMILPIGV 167 (231)
T ss_dssp -EEEEEEEEECS
T ss_pred -CCcEEEEEEcC
Confidence 99999876544
No 125
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=98.67 E-value=2.9e-08 Score=79.55 Aligned_cols=72 Identities=15% Similarity=0.104 Sum_probs=59.4
Q ss_pred CCeEEEEeCCHHHHHHhhc------CCCceEEecCCCCcchhhccCCCC---CCceeeeeechhhccCChhHHHHHHHHH
Q 035840 5 YKNVIATDTSPKQLEFAIK------LPNIRYQLTPPTMSITELEQNVAT---QSSVDLVTIAAALHWFDLPQFYKQVKWV 75 (213)
Q Consensus 5 ~~~V~gvD~S~~ml~~Ar~------~~~v~~~~~~~~~~~~d~~~~~~~---~~sfDlV~~~~~~hw~d~~~~~~e~~rv 75 (213)
..+|+|+|+|+.|++.|++ ..++++..+++ ++++.. +++||+|++... .+...++.++.++
T Consensus 104 ~~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~d~-------~~~~~~~~~~~~fD~I~s~a~---~~~~~ll~~~~~~ 173 (249)
T 3g89_A 104 ELELVLVDATRKKVAFVERAIEVLGLKGARALWGRA-------EVLAREAGHREAYARAVARAV---APLCVLSELLLPF 173 (249)
T ss_dssp TCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEECCH-------HHHTTSTTTTTCEEEEEEESS---CCHHHHHHHHGGG
T ss_pred CCEEEEEECCHHHHHHHHHHHHHhCCCceEEEECcH-------HHhhcccccCCCceEEEECCc---CCHHHHHHHHHHH
Confidence 4689999999999999997 25788999888 665543 478999998642 3778999999999
Q ss_pred hcCCCeEEEEEe
Q 035840 76 LKKPNGVIAAWT 87 (213)
Q Consensus 76 Lk~pgG~l~~~~ 87 (213)
|| |||.++++.
T Consensus 174 Lk-pgG~l~~~~ 184 (249)
T 3g89_A 174 LE-VGGAAVAMK 184 (249)
T ss_dssp EE-EEEEEEEEE
T ss_pred cC-CCeEEEEEe
Confidence 99 999988654
No 126
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=98.67 E-value=2.4e-08 Score=80.97 Aligned_cols=72 Identities=14% Similarity=0.131 Sum_probs=60.5
Q ss_pred CCeEEEEeCCHHHHHHhhcC-------CCceEEecCCCCcchhhccCCCCCCceeeeeechhhccCChhHHHHHHHHHhc
Q 035840 5 YKNVIATDTSPKQLEFAIKL-------PNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWFDLPQFYKQVKWVLK 77 (213)
Q Consensus 5 ~~~V~gvD~S~~ml~~Ar~~-------~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~d~~~~~~e~~rvLk 77 (213)
..+|+|+|+|+.|++.|++. +++++..+++ .+ ++++++||+|++ +.-++..+++++.++||
T Consensus 135 ~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~-------~~-~~~~~~fD~Vi~----~~~~~~~~l~~~~~~Lk 202 (275)
T 1yb2_A 135 KGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDI-------AD-FISDQMYDAVIA----DIPDPWNHVQKIASMMK 202 (275)
T ss_dssp SSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCT-------TT-CCCSCCEEEEEE----CCSCGGGSHHHHHHTEE
T ss_pred CCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECch-------hc-cCcCCCccEEEE----cCcCHHHHHHHHHHHcC
Confidence 57999999999999999862 3678888877 54 567788999998 45588899999999999
Q ss_pred CCCeEEEEEeCC
Q 035840 78 KPNGVIAAWTYT 89 (213)
Q Consensus 78 ~pgG~l~~~~~~ 89 (213)
|||.+++.+..
T Consensus 203 -pgG~l~i~~~~ 213 (275)
T 1yb2_A 203 -PGSVATFYLPN 213 (275)
T ss_dssp -EEEEEEEEESS
T ss_pred -CCCEEEEEeCC
Confidence 99999887654
No 127
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=98.67 E-value=2.6e-08 Score=84.52 Aligned_cols=89 Identities=13% Similarity=0.148 Sum_probs=65.4
Q ss_pred CCeEEEEeCCHHHHHHhhcC---------CCceEEecCCCCcchhhccCCCCCCceeeeeechhhcc---C-C--hhHHH
Q 035840 5 YKNVIATDTSPKQLEFAIKL---------PNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHW---F-D--LPQFY 69 (213)
Q Consensus 5 ~~~V~gvD~S~~ml~~Ar~~---------~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw---~-d--~~~~~ 69 (213)
..+|+|+|+|+.|++.|++. .+++|..+++ .+ ++++++||+|+++-.+|+ + + ...++
T Consensus 246 ~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~-------~~-~~~~~~fD~Ii~nppfh~~~~~~~~~~~~~l 317 (375)
T 4dcm_A 246 QAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNA-------LS-GVEPFRFNAVLCNPPFHQQHALTDNVAWEMF 317 (375)
T ss_dssp TCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECST-------TT-TCCTTCEEEEEECCCC-------CCHHHHHH
T ss_pred CCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechh-------hc-cCCCCCeeEEEECCCcccCcccCHHHHHHHH
Confidence 46999999999999999972 1477788877 44 467889999999999885 3 1 13679
Q ss_pred HHHHHHhcCCCeEEEEEeCCCCCcChHHHHhcc
Q 035840 70 KQVKWVLKKPNGVIAAWTYTMPEINESVGAVFK 102 (213)
Q Consensus 70 ~e~~rvLk~pgG~l~~~~~~~~~~~~~~~~~~~ 102 (213)
+++.++|| |||.+++.........+.+.+.+.
T Consensus 318 ~~~~~~Lk-pgG~l~iv~n~~~~~~~~l~~~fg 349 (375)
T 4dcm_A 318 HHARRCLK-INGELYIVANRHLDYFHKLKKIFG 349 (375)
T ss_dssp HHHHHHEE-EEEEEEEEEETTSCHHHHHHHHHS
T ss_pred HHHHHhCC-CCcEEEEEEECCcCHHHHHHHhcC
Confidence 99999999 999999876654433334444444
No 128
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=98.64 E-value=2.4e-08 Score=75.61 Aligned_cols=77 Identities=18% Similarity=0.236 Sum_probs=60.9
Q ss_pred cccCCeEEEEeCCHHHHHHhhcC-------CCceEEecCCCCcchhhccCCCCC-CceeeeeechhhccCChhHHHHHHH
Q 035840 2 AKIYKNVIATDTSPKQLEFAIKL-------PNIRYQLTPPTMSITELEQNVATQ-SSVDLVTIAAALHWFDLPQFYKQVK 73 (213)
Q Consensus 2 a~~~~~V~gvD~S~~ml~~Ar~~-------~~v~~~~~~~~~~~~d~~~~~~~~-~sfDlV~~~~~~hw~d~~~~~~e~~ 73 (213)
+..+.+|+|+|+|+.|++.|++. +++.+..+++ .+ ++++ ++||+|++...++ +...++.++.
T Consensus 52 ~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~-------~~-~~~~~~~~D~v~~~~~~~--~~~~~l~~~~ 121 (192)
T 1l3i_A 52 AGRVRRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDA-------PE-ALCKIPDIDIAVVGGSGG--ELQEILRIIK 121 (192)
T ss_dssp HTTSSEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCH-------HH-HHTTSCCEEEEEESCCTT--CHHHHHHHHH
T ss_pred HHhcCEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCH-------HH-hcccCCCCCEEEECCchH--HHHHHHHHHH
Confidence 34457999999999999999972 4678888776 43 2333 5799999887765 5689999999
Q ss_pred HHhcCCCeEEEEEeCC
Q 035840 74 WVLKKPNGVIAAWTYT 89 (213)
Q Consensus 74 rvLk~pgG~l~~~~~~ 89 (213)
++|+ |||.+++....
T Consensus 122 ~~l~-~gG~l~~~~~~ 136 (192)
T 1l3i_A 122 DKLK-PGGRIIVTAIL 136 (192)
T ss_dssp HTEE-EEEEEEEEECB
T ss_pred HhcC-CCcEEEEEecC
Confidence 9999 99999876654
No 129
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=98.63 E-value=1.9e-08 Score=77.68 Aligned_cols=73 Identities=22% Similarity=0.165 Sum_probs=60.0
Q ss_pred CCeEEEEeCCHHHHHHhhcC------CCceEEecCCCCcchhhccCCCCCCceeeeeechhhccCChhHHHHHHHHHhcC
Q 035840 5 YKNVIATDTSPKQLEFAIKL------PNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWFDLPQFYKQVKWVLKK 78 (213)
Q Consensus 5 ~~~V~gvD~S~~ml~~Ar~~------~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~d~~~~~~e~~rvLk~ 78 (213)
..+|+|+|+|+.|++.|++. .++++..+++ .+ +.+++||+|++...+++ ...+++++.++||
T Consensus 83 ~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~-------~~--~~~~~fD~i~~~~~~~~--~~~~l~~~~~~L~- 150 (205)
T 3grz_A 83 AKSVLATDISDESMTAAEENAALNGIYDIALQKTSL-------LA--DVDGKFDLIVANILAEI--LLDLIPQLDSHLN- 150 (205)
T ss_dssp CSEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESST-------TT--TCCSCEEEEEEESCHHH--HHHHGGGSGGGEE-
T ss_pred CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEeccc-------cc--cCCCCceEEEECCcHHH--HHHHHHHHHHhcC-
Confidence 34999999999999999973 3488888877 43 34688999999988876 4788999999999
Q ss_pred CCeEEEEEeCC
Q 035840 79 PNGVIAAWTYT 89 (213)
Q Consensus 79 pgG~l~~~~~~ 89 (213)
|||.+++....
T Consensus 151 ~gG~l~~~~~~ 161 (205)
T 3grz_A 151 EDGQVIFSGID 161 (205)
T ss_dssp EEEEEEEEEEE
T ss_pred CCCEEEEEecC
Confidence 99999886544
No 130
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=98.63 E-value=1.7e-08 Score=76.43 Aligned_cols=81 Identities=15% Similarity=0.130 Sum_probs=62.0
Q ss_pred CCeEEEEeCCHHHHHHhhcC-------CCceEEecCCCCcchhhccCCCCCCceeeeeechhhccCChhHHHHHH--HHH
Q 035840 5 YKNVIATDTSPKQLEFAIKL-------PNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWFDLPQFYKQV--KWV 75 (213)
Q Consensus 5 ~~~V~gvD~S~~ml~~Ar~~-------~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~d~~~~~~e~--~rv 75 (213)
..+|+|+|+|+.|++.|++. +++++..+++... +..++.++++||+|++...++..+....+..+ .|+
T Consensus 67 ~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~---~~~~~~~~~~fD~i~~~~~~~~~~~~~~~~~l~~~~~ 143 (187)
T 2fhp_A 67 MDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRA---LEQFYEEKLQFDLVLLDPPYAKQEIVSQLEKMLERQL 143 (187)
T ss_dssp CSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHH---HHHHHHTTCCEEEEEECCCGGGCCHHHHHHHHHHTTC
T ss_pred CCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHH---HHHHHhcCCCCCEEEECCCCCchhHHHHHHHHHHhcc
Confidence 36999999999999999972 3588888877210 11122336789999999887766888888888 899
Q ss_pred hcCCCeEEEEEeCC
Q 035840 76 LKKPNGVIAAWTYT 89 (213)
Q Consensus 76 Lk~pgG~l~~~~~~ 89 (213)
|| |||.+++....
T Consensus 144 L~-~gG~l~~~~~~ 156 (187)
T 2fhp_A 144 LT-NEAVIVCETDK 156 (187)
T ss_dssp EE-EEEEEEEEEET
T ss_pred cC-CCCEEEEEeCC
Confidence 99 99999876544
No 131
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=98.63 E-value=7.1e-08 Score=81.55 Aligned_cols=74 Identities=19% Similarity=0.162 Sum_probs=62.2
Q ss_pred CeEEEEeCCHHHHHHhhcCCCceEEecCCCCcchhhccCCCCCCceeeeeechhhccC-Ch--hHHHHHHHHHhcCCCeE
Q 035840 6 KNVIATDTSPKQLEFAIKLPNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWF-DL--PQFYKQVKWVLKKPNGV 82 (213)
Q Consensus 6 ~~V~gvD~S~~ml~~Ar~~~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~-d~--~~~~~e~~rvLk~pgG~ 82 (213)
.+++++|+ +.|++.|++.++++|+.++. .+ +++++ |+|++..++|++ |. .+++++++|+|| |||+
T Consensus 228 ~~~~~~D~-~~~~~~a~~~~~v~~~~~d~-------~~-~~p~~--D~v~~~~vlh~~~~~~~~~~l~~~~~~L~-pgG~ 295 (368)
T 3reo_A 228 INAINFDL-PHVIQDAPAFSGVEHLGGDM-------FD-GVPKG--DAIFIKWICHDWSDEHCLKLLKNCYAALP-DHGK 295 (368)
T ss_dssp CEEEEEEC-HHHHTTCCCCTTEEEEECCT-------TT-CCCCC--SEEEEESCGGGBCHHHHHHHHHHHHHHSC-TTCE
T ss_pred CEEEEEeh-HHHHHhhhhcCCCEEEecCC-------CC-CCCCC--CEEEEechhhcCCHHHHHHHHHHHHHHcC-CCCE
Confidence 47999999 99999999888999999887 44 56654 999999999855 43 478999999999 9999
Q ss_pred EEEEeCCCC
Q 035840 83 IAAWTYTMP 91 (213)
Q Consensus 83 l~~~~~~~~ 91 (213)
|++.....+
T Consensus 296 l~i~e~~~~ 304 (368)
T 3reo_A 296 VIVAEYILP 304 (368)
T ss_dssp EEEEECCCC
T ss_pred EEEEEeccC
Confidence 998876543
No 132
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=98.63 E-value=2.4e-08 Score=82.69 Aligned_cols=71 Identities=17% Similarity=0.079 Sum_probs=58.6
Q ss_pred CeEEEEeCCHHHHHHhhcC------CCceEEecCCCCcchhhccCCCCCCceeeeeechhhccCChhHHHHHHHHHhcCC
Q 035840 6 KNVIATDTSPKQLEFAIKL------PNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWFDLPQFYKQVKWVLKKP 79 (213)
Q Consensus 6 ~~V~gvD~S~~ml~~Ar~~------~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~d~~~~~~e~~rvLk~p 79 (213)
.+|+|+|+|+.|++.|++. +++++..+++ .+.+.++++||+|++..+++++. +++.++|| |
T Consensus 101 ~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~-------~~~~~~~~~fD~Iv~~~~~~~~~-----~~~~~~Lk-p 167 (317)
T 1dl5_A 101 GLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDG-------YYGVPEFSPYDVIFVTVGVDEVP-----ETWFTQLK-E 167 (317)
T ss_dssp CEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCG-------GGCCGGGCCEEEEEECSBBSCCC-----HHHHHHEE-E
T ss_pred CEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECCh-------hhccccCCCeEEEEEcCCHHHHH-----HHHHHhcC-C
Confidence 3599999999999999973 5688888887 55444567899999999999876 57899999 9
Q ss_pred CeEEEEEeCC
Q 035840 80 NGVIAAWTYT 89 (213)
Q Consensus 80 gG~l~~~~~~ 89 (213)
||.+++....
T Consensus 168 gG~lvi~~~~ 177 (317)
T 1dl5_A 168 GGRVIVPINL 177 (317)
T ss_dssp EEEEEEEBCB
T ss_pred CcEEEEEECC
Confidence 9999877543
No 133
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=98.63 E-value=2.3e-08 Score=77.66 Aligned_cols=71 Identities=15% Similarity=0.038 Sum_probs=57.3
Q ss_pred CeEEEEeCCHHHHHHhhcC------CCceEEecCCCCcchhhccCCCCCCceeeeeechhhccCChhHHHHHHHHHhcCC
Q 035840 6 KNVIATDTSPKQLEFAIKL------PNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWFDLPQFYKQVKWVLKKP 79 (213)
Q Consensus 6 ~~V~gvD~S~~ml~~Ar~~------~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~d~~~~~~e~~rvLk~p 79 (213)
.+|+|+|+|+.|++.|++. +++++..+++ ......+++||+|++..+++++. .++.++|| |
T Consensus 103 ~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~-------~~~~~~~~~fD~v~~~~~~~~~~-----~~~~~~L~-p 169 (215)
T 2yxe_A 103 GLVVSIERIPELAEKAERTLRKLGYDNVIVIVGDG-------TLGYEPLAPYDRIYTTAAGPKIP-----EPLIRQLK-D 169 (215)
T ss_dssp SEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCG-------GGCCGGGCCEEEEEESSBBSSCC-----HHHHHTEE-E
T ss_pred CEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCc-------ccCCCCCCCeeEEEECCchHHHH-----HHHHHHcC-C
Confidence 6999999999999999973 5688888776 33222367899999999999875 48999999 9
Q ss_pred CeEEEEEeCC
Q 035840 80 NGVIAAWTYT 89 (213)
Q Consensus 80 gG~l~~~~~~ 89 (213)
||.+++....
T Consensus 170 gG~lv~~~~~ 179 (215)
T 2yxe_A 170 GGKLLMPVGR 179 (215)
T ss_dssp EEEEEEEESS
T ss_pred CcEEEEEECC
Confidence 9999876543
No 134
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=98.63 E-value=1.3e-09 Score=86.38 Aligned_cols=75 Identities=16% Similarity=0.074 Sum_probs=62.8
Q ss_pred cccCCeEEEEeCCHHHHHHhhcC-------CCceEEecCCCCcchhhccCCCCCCceeeeeechhhccC-ChhHHHHHHH
Q 035840 2 AKIYKNVIATDTSPKQLEFAIKL-------PNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWF-DLPQFYKQVK 73 (213)
Q Consensus 2 a~~~~~V~gvD~S~~ml~~Ar~~-------~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~-d~~~~~~e~~ 73 (213)
+..+.+|+|+|+|+.|++.|++. +++++..+++ .+++ ++++||+|++...+|+. +....+.++.
T Consensus 97 a~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~-------~~~~-~~~~~D~v~~~~~~~~~~~~~~~~~~~~ 168 (241)
T 3gdh_A 97 ALTGMRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDF-------LLLA-SFLKADVVFLSPPWGGPDYATAETFDIR 168 (241)
T ss_dssp HHTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCH-------HHHG-GGCCCSEEEECCCCSSGGGGGSSSBCTT
T ss_pred HHcCCEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECCh-------HHhc-ccCCCCEEEECCCcCCcchhhhHHHHHH
Confidence 45678999999999999999973 3688888887 5554 56789999999999988 6666888999
Q ss_pred HHhcCCCeEEEE
Q 035840 74 WVLKKPNGVIAA 85 (213)
Q Consensus 74 rvLk~pgG~l~~ 85 (213)
++|+ |||.+++
T Consensus 169 ~~L~-pgG~~i~ 179 (241)
T 3gdh_A 169 TMMS-PDGFEIF 179 (241)
T ss_dssp TSCS-SCHHHHH
T ss_pred hhcC-CcceeHH
Confidence 9999 9999643
No 135
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=98.63 E-value=7.6e-08 Score=81.25 Aligned_cols=74 Identities=15% Similarity=0.143 Sum_probs=62.7
Q ss_pred CeEEEEeCCHHHHHHhhcCCCceEEecCCCCcchhhccCCCCCCceeeeeechhhccC---ChhHHHHHHHHHhcCCCeE
Q 035840 6 KNVIATDTSPKQLEFAIKLPNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWF---DLPQFYKQVKWVLKKPNGV 82 (213)
Q Consensus 6 ~~V~gvD~S~~ml~~Ar~~~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~---d~~~~~~e~~rvLk~pgG~ 82 (213)
.+++++|+ |.|++.|++.++++|+.+++ .+ |++++ |+|++..++|.. +..+++++++++|| |||+
T Consensus 226 ~~~~~~D~-~~~~~~a~~~~~v~~~~~D~-------~~-~~p~~--D~v~~~~vlh~~~d~~~~~~L~~~~~~L~-pgG~ 293 (364)
T 3p9c_A 226 IKGVNFDL-PHVISEAPQFPGVTHVGGDM-------FK-EVPSG--DTILMKWILHDWSDQHCATLLKNCYDALP-AHGK 293 (364)
T ss_dssp CEEEEEEC-HHHHTTCCCCTTEEEEECCT-------TT-CCCCC--SEEEEESCGGGSCHHHHHHHHHHHHHHSC-TTCE
T ss_pred CeEEEecC-HHHHHhhhhcCCeEEEeCCc-------CC-CCCCC--CEEEehHHhccCCHHHHHHHHHHHHHHcC-CCCE
Confidence 47999999 99999999888999999887 55 66654 999999999855 34588999999999 9999
Q ss_pred EEEEeCCCC
Q 035840 83 IAAWTYTMP 91 (213)
Q Consensus 83 l~~~~~~~~ 91 (213)
|++.....+
T Consensus 294 l~i~e~~~~ 302 (364)
T 3p9c_A 294 VVLVQCILP 302 (364)
T ss_dssp EEEEECCBC
T ss_pred EEEEEeccC
Confidence 998876543
No 136
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=98.63 E-value=1.3e-08 Score=80.91 Aligned_cols=74 Identities=15% Similarity=0.032 Sum_probs=59.6
Q ss_pred CCeEEEEeCCHHHHHHhhcC-CCceEEecCCCCcchhhcc---CCC-CCCceeeeeechhhccCChhHHHHHHHH-HhcC
Q 035840 5 YKNVIATDTSPKQLEFAIKL-PNIRYQLTPPTMSITELEQ---NVA-TQSSVDLVTIAAALHWFDLPQFYKQVKW-VLKK 78 (213)
Q Consensus 5 ~~~V~gvD~S~~ml~~Ar~~-~~v~~~~~~~~~~~~d~~~---~~~-~~~sfDlV~~~~~~hw~d~~~~~~e~~r-vLk~ 78 (213)
.++|+|+|+|+.|++.|+.. +++++.++++ .+ ++. .+.+||+|++..+ | .+...++.++.| +||
T Consensus 109 ~~~V~gvD~s~~~l~~a~~~~~~v~~~~gD~-------~~~~~l~~~~~~~fD~I~~d~~-~-~~~~~~l~~~~r~~Lk- 178 (236)
T 2bm8_A 109 DCQVIGIDRDLSRCQIPASDMENITLHQGDC-------SDLTTFEHLREMAHPLIFIDNA-H-ANTFNIMKWAVDHLLE- 178 (236)
T ss_dssp CCEEEEEESCCTTCCCCGGGCTTEEEEECCS-------SCSGGGGGGSSSCSSEEEEESS-C-SSHHHHHHHHHHHTCC-
T ss_pred CCEEEEEeCChHHHHHHhccCCceEEEECcc-------hhHHHHHhhccCCCCEEEECCc-h-HhHHHHHHHHHHhhCC-
Confidence 57999999999999999863 6799999988 33 243 3347999997655 4 488999999998 999
Q ss_pred CCeEEEEEeC
Q 035840 79 PNGVIAAWTY 88 (213)
Q Consensus 79 pgG~l~~~~~ 88 (213)
|||.|++.+.
T Consensus 179 pGG~lv~~d~ 188 (236)
T 2bm8_A 179 EGDYFIIEDM 188 (236)
T ss_dssp TTCEEEECSC
T ss_pred CCCEEEEEeC
Confidence 9999987654
No 137
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=98.61 E-value=7.3e-08 Score=79.92 Aligned_cols=77 Identities=18% Similarity=0.208 Sum_probs=63.1
Q ss_pred CCeEEEEeCCHHHHHHhhcC-------CCceEEecCCCCcchhhccCCCCCCceeeeeechhhccC---ChhHHHHHHHH
Q 035840 5 YKNVIATDTSPKQLEFAIKL-------PNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWF---DLPQFYKQVKW 74 (213)
Q Consensus 5 ~~~V~gvD~S~~ml~~Ar~~-------~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~---d~~~~~~e~~r 74 (213)
..+|+|+|+| .|++.|++. .++++..++. .+.+++++ ||+|++..++|.+ +..++++++.+
T Consensus 189 ~~~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~~d~-------~~~~~~~~-~D~v~~~~~l~~~~~~~~~~~l~~~~~ 259 (335)
T 2r3s_A 189 NAEIFGVDWA-SVLEVAKENARIQGVASRYHTIAGSA-------FEVDYGND-YDLVLLPNFLHHFDVATCEQLLRKIKT 259 (335)
T ss_dssp TCEEEEEECH-HHHHHHHHHHHHHTCGGGEEEEESCT-------TTSCCCSC-EEEEEEESCGGGSCHHHHHHHHHHHHH
T ss_pred CCeEEEEecH-HHHHHHHHHHHhcCCCcceEEEeccc-------ccCCCCCC-CcEEEEcchhccCCHHHHHHHHHHHHH
Confidence 3589999999 999999973 3588888887 55566655 9999999999876 33699999999
Q ss_pred HhcCCCeEEEEEeCCCC
Q 035840 75 VLKKPNGVIAAWTYTMP 91 (213)
Q Consensus 75 vLk~pgG~l~~~~~~~~ 91 (213)
+|| |||.+++.....+
T Consensus 260 ~L~-pgG~l~i~e~~~~ 275 (335)
T 2r3s_A 260 ALA-VEGKVIVFDFIPN 275 (335)
T ss_dssp HEE-EEEEEEEEECCCC
T ss_pred hCC-CCcEEEEEeecCC
Confidence 999 9999988876543
No 138
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=98.61 E-value=7.5e-08 Score=76.79 Aligned_cols=72 Identities=17% Similarity=0.201 Sum_probs=60.1
Q ss_pred CCeEEEEeCCHHHHHHhhcC------CC-ceEEecCCCCcchhhccCCCCCCceeeeeechhhccCChhHHHHHHHHHhc
Q 035840 5 YKNVIATDTSPKQLEFAIKL------PN-IRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWFDLPQFYKQVKWVLK 77 (213)
Q Consensus 5 ~~~V~gvD~S~~ml~~Ar~~------~~-v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~d~~~~~~e~~rvLk 77 (213)
..+|+|+|+|+.|++.|++. ++ +++..+++ .+. +++++||+|++ +.-++..++.++.++||
T Consensus 118 ~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~-------~~~-~~~~~~D~v~~----~~~~~~~~l~~~~~~L~ 185 (255)
T 3mb5_A 118 EGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDI-------YEG-IEEENVDHVIL----DLPQPERVVEHAAKALK 185 (255)
T ss_dssp TSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCG-------GGC-CCCCSEEEEEE----CSSCGGGGHHHHHHHEE
T ss_pred CeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECch-------hhc-cCCCCcCEEEE----CCCCHHHHHHHHHHHcC
Confidence 57999999999999999973 34 88888877 543 77888999998 34488899999999999
Q ss_pred CCCeEEEEEeCC
Q 035840 78 KPNGVIAAWTYT 89 (213)
Q Consensus 78 ~pgG~l~~~~~~ 89 (213)
|||.+++....
T Consensus 186 -~gG~l~~~~~~ 196 (255)
T 3mb5_A 186 -PGGFFVAYTPC 196 (255)
T ss_dssp -EEEEEEEEESS
T ss_pred -CCCEEEEEECC
Confidence 99999887644
No 139
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=98.60 E-value=2.7e-08 Score=74.11 Aligned_cols=85 Identities=12% Similarity=0.128 Sum_probs=61.9
Q ss_pred cccCCeEEEEeCCHHHHHHhhcC----C-CceEEecCCCCcchhhccCCCCCCceeeeeechhhccCChhHHHHHHH--H
Q 035840 2 AKIYKNVIATDTSPKQLEFAIKL----P-NIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWFDLPQFYKQVK--W 74 (213)
Q Consensus 2 a~~~~~V~gvD~S~~ml~~Ar~~----~-~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~d~~~~~~e~~--r 74 (213)
+.++.+|+|+|+|+.|++.|++. . ++++..+++... +...+..+++||+|++...++ -+....+..+. +
T Consensus 60 ~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~---~~~~~~~~~~~D~i~~~~~~~-~~~~~~~~~~~~~~ 135 (171)
T 1ws6_A 60 ASEGWEAVLVEKDPEAVRLLKENVRRTGLGARVVALPVEVF---LPEAKAQGERFTVAFMAPPYA-MDLAALFGELLASG 135 (171)
T ss_dssp HHTTCEEEEECCCHHHHHHHHHHHHHHTCCCEEECSCHHHH---HHHHHHTTCCEEEEEECCCTT-SCTTHHHHHHHHHT
T ss_pred HHCCCeEEEEeCCHHHHHHHHHHHHHcCCceEEEeccHHHH---HHhhhccCCceEEEEECCCCc-hhHHHHHHHHHhhc
Confidence 34566799999999999999973 1 678888776210 011111234799999998887 67778888888 9
Q ss_pred HhcCCCeEEEEEeCCCC
Q 035840 75 VLKKPNGVIAAWTYTMP 91 (213)
Q Consensus 75 vLk~pgG~l~~~~~~~~ 91 (213)
+|| |||.+++.+....
T Consensus 136 ~L~-~gG~~~~~~~~~~ 151 (171)
T 1ws6_A 136 LVE-AGGLYVLQHPKDL 151 (171)
T ss_dssp CEE-EEEEEEEEEETTS
T ss_pred ccC-CCcEEEEEeCCcc
Confidence 999 9999987665533
No 140
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=98.60 E-value=5.9e-08 Score=78.46 Aligned_cols=73 Identities=19% Similarity=0.207 Sum_probs=61.0
Q ss_pred CCeEEEEeCCHHHHHHhhcC---------CCceEEecCCCCcchhhccCCCCCCceeeeeechhhccCChhHHHHHHHHH
Q 035840 5 YKNVIATDTSPKQLEFAIKL---------PNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWFDLPQFYKQVKWV 75 (213)
Q Consensus 5 ~~~V~gvD~S~~ml~~Ar~~---------~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~d~~~~~~e~~rv 75 (213)
..+|+|+|+|+.|++.|++. +++++..+++ .+.++++++||+|++. .-++..++.++.++
T Consensus 124 ~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~-------~~~~~~~~~~D~v~~~----~~~~~~~l~~~~~~ 192 (280)
T 1i9g_A 124 AGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDL-------ADSELPDGSVDRAVLD----MLAPWEVLDAVSRL 192 (280)
T ss_dssp TSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCG-------GGCCCCTTCEEEEEEE----SSCGGGGHHHHHHH
T ss_pred CCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECch-------HhcCCCCCceeEEEEC----CcCHHHHHHHHHHh
Confidence 56999999999999999862 3677888777 6667778899999983 33778999999999
Q ss_pred hcCCCeEEEEEeCC
Q 035840 76 LKKPNGVIAAWTYT 89 (213)
Q Consensus 76 Lk~pgG~l~~~~~~ 89 (213)
|| |||.+++....
T Consensus 193 L~-pgG~l~~~~~~ 205 (280)
T 1i9g_A 193 LV-AGGVLMVYVAT 205 (280)
T ss_dssp EE-EEEEEEEEESS
T ss_pred CC-CCCEEEEEeCC
Confidence 99 99999887654
No 141
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=98.60 E-value=5.6e-08 Score=74.96 Aligned_cols=71 Identities=17% Similarity=0.126 Sum_probs=57.9
Q ss_pred CCeEEEEeCCHHHHHHhhcC------CCceEEecCCCCcchhhccCCCCCCceeeeeechhhccCChhHHHHHHHHHhcC
Q 035840 5 YKNVIATDTSPKQLEFAIKL------PNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWFDLPQFYKQVKWVLKK 78 (213)
Q Consensus 5 ~~~V~gvD~S~~ml~~Ar~~------~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~d~~~~~~e~~rvLk~ 78 (213)
..+|+|+|+|+.|++.|++. +++++..+++ ++.+ ++++||+|++.. +-+...++.++.++||
T Consensus 89 ~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~-------~~~~-~~~~~D~i~~~~---~~~~~~~l~~~~~~L~- 156 (207)
T 1jsx_A 89 EAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRV-------EEFP-SEPPFDGVISRA---FASLNDMVSWCHHLPG- 156 (207)
T ss_dssp TSEEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCT-------TTSC-CCSCEEEEECSC---SSSHHHHHHHHTTSEE-
T ss_pred CCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEecch-------hhCC-ccCCcCEEEEec---cCCHHHHHHHHHHhcC-
Confidence 46999999999999999872 4588888887 5554 467899999743 2478899999999999
Q ss_pred CCeEEEEEe
Q 035840 79 PNGVIAAWT 87 (213)
Q Consensus 79 pgG~l~~~~ 87 (213)
|||.+++..
T Consensus 157 ~gG~l~~~~ 165 (207)
T 1jsx_A 157 EQGRFYALK 165 (207)
T ss_dssp EEEEEEEEE
T ss_pred CCcEEEEEe
Confidence 999998763
No 142
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=98.60 E-value=6.3e-08 Score=78.77 Aligned_cols=76 Identities=14% Similarity=0.145 Sum_probs=60.1
Q ss_pred cccCC-eEEEEeCCHHHHHHhhcC------C-CceEEecCCCCcchhhccCCCCCCceeeeeechhhccCChhHHHHHHH
Q 035840 2 AKIYK-NVIATDTSPKQLEFAIKL------P-NIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWFDLPQFYKQVK 73 (213)
Q Consensus 2 a~~~~-~V~gvD~S~~ml~~Ar~~------~-~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~d~~~~~~e~~ 73 (213)
|..++ +|+|+|+|+.|++.|++. . ++++..+++ .+++. +++||+|++... .+...++.++.
T Consensus 144 a~~~~~~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~-------~~~~~-~~~fD~Vi~~~p---~~~~~~l~~~~ 212 (278)
T 2frn_A 144 AVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDN-------RDFPG-ENIADRILMGYV---VRTHEFIPKAL 212 (278)
T ss_dssp HHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCT-------TTCCC-CSCEEEEEECCC---SSGGGGHHHHH
T ss_pred HHhCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCH-------HHhcc-cCCccEEEECCc---hhHHHHHHHHH
Confidence 34444 699999999999999972 2 377888888 66544 778999998533 36678999999
Q ss_pred HHhcCCCeEEEEEeCC
Q 035840 74 WVLKKPNGVIAAWTYT 89 (213)
Q Consensus 74 rvLk~pgG~l~~~~~~ 89 (213)
++|| |||.+.+.+..
T Consensus 213 ~~Lk-pgG~l~~~~~~ 227 (278)
T 2frn_A 213 SIAK-DGAIIHYHNTV 227 (278)
T ss_dssp HHEE-EEEEEEEEEEE
T ss_pred HHCC-CCeEEEEEEee
Confidence 9999 99999877655
No 143
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=98.59 E-value=1.3e-08 Score=76.77 Aligned_cols=77 Identities=9% Similarity=0.008 Sum_probs=59.9
Q ss_pred CCeEEEEeCCHHHHHHhhcC-------CCceEEecCCCCcchhhcc-CCCCCCceeeeeechhhccCChhHHHHHHH--H
Q 035840 5 YKNVIATDTSPKQLEFAIKL-------PNIRYQLTPPTMSITELEQ-NVATQSSVDLVTIAAALHWFDLPQFYKQVK--W 74 (213)
Q Consensus 5 ~~~V~gvD~S~~ml~~Ar~~-------~~v~~~~~~~~~~~~d~~~-~~~~~~sfDlV~~~~~~hw~d~~~~~~e~~--r 74 (213)
..+|+|+|+|+.|++.|++. +++++..+++ .+ ++..+++||+|++...+++.+....+..+. +
T Consensus 54 ~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~-------~~~~~~~~~~fD~i~~~~~~~~~~~~~~~~~l~~~~ 126 (177)
T 2esr_A 54 MSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEA-------ERAIDCLTGRFDLVFLDPPYAKETIVATIEALAAKN 126 (177)
T ss_dssp CCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCH-------HHHHHHBCSCEEEEEECCSSHHHHHHHHHHHHHHTT
T ss_pred CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcH-------HHhHHhhcCCCCEEEECCCCCcchHHHHHHHHHhCC
Confidence 46999999999999999972 2577888776 33 233346799999987776556778888887 9
Q ss_pred HhcCCCeEEEEEeCC
Q 035840 75 VLKKPNGVIAAWTYT 89 (213)
Q Consensus 75 vLk~pgG~l~~~~~~ 89 (213)
+|| |||.+++....
T Consensus 127 ~L~-~gG~l~~~~~~ 140 (177)
T 2esr_A 127 LLS-EQVMVVCETDK 140 (177)
T ss_dssp CEE-EEEEEEEEEET
T ss_pred CcC-CCcEEEEEECC
Confidence 999 99999876554
No 144
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=98.59 E-value=4.7e-08 Score=77.13 Aligned_cols=75 Identities=17% Similarity=0.029 Sum_probs=54.6
Q ss_pred CeEEEEeCCHHHH----HHhhcCCCceEEecCCCCcchhhccCCCCCCceeeeeechhhccCCh-hHHHHHHHHHhcCCC
Q 035840 6 KNVIATDTSPKQL----EFAIKLPNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWFDL-PQFYKQVKWVLKKPN 80 (213)
Q Consensus 6 ~~V~gvD~S~~ml----~~Ar~~~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~d~-~~~~~e~~rvLk~pg 80 (213)
++|+|+|+|+.|+ +.|++.+++++..++++. ...+++.+++||+|++... ..+. ..++.++.++|| ||
T Consensus 103 ~~v~gvD~s~~~i~~~~~~a~~~~~v~~~~~d~~~----~~~~~~~~~~~D~V~~~~~--~~~~~~~~~~~~~~~Lk-pg 175 (233)
T 2ipx_A 103 GLVYAVEFSHRSGRDLINLAKKRTNIIPVIEDARH----PHKYRMLIAMVDVIFADVA--QPDQTRIVALNAHTFLR-NG 175 (233)
T ss_dssp CEEEEECCCHHHHHHHHHHHHHCTTEEEECSCTTC----GGGGGGGCCCEEEEEECCC--CTTHHHHHHHHHHHHEE-EE
T ss_pred cEEEEEECCHHHHHHHHHHhhccCCeEEEEcccCC----hhhhcccCCcEEEEEEcCC--CccHHHHHHHHHHHHcC-CC
Confidence 6999999997754 455556789999988831 1124556788999998655 2233 445889999999 99
Q ss_pred eEEEEEe
Q 035840 81 GVIAAWT 87 (213)
Q Consensus 81 G~l~~~~ 87 (213)
|.+++..
T Consensus 176 G~l~i~~ 182 (233)
T 2ipx_A 176 GHFVISI 182 (233)
T ss_dssp EEEEEEE
T ss_pred eEEEEEE
Confidence 9998753
No 145
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=98.59 E-value=1.7e-08 Score=82.19 Aligned_cols=75 Identities=11% Similarity=-0.093 Sum_probs=55.2
Q ss_pred cccCCeEEEEeCCHHHHHHhhcC--C------CceEE--ecCCCCcchhhccCCCCCCceeeeeechhhccC-----Chh
Q 035840 2 AKIYKNVIATDTSPKQLEFAIKL--P------NIRYQ--LTPPTMSITELEQNVATQSSVDLVTIAAALHWF-----DLP 66 (213)
Q Consensus 2 a~~~~~V~gvD~S~~ml~~Ar~~--~------~v~~~--~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~-----d~~ 66 (213)
++. ++|+|||+|+ |+..|++. + ++.+. ++++ .++| +++||+|++..+ ++. |..
T Consensus 101 a~~-~~V~gVD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~-------~~l~--~~~fD~Vvsd~~-~~~~~~~~d~~ 168 (276)
T 2wa2_A 101 ASQ-PNVREVKAYT-LGTSGHEKPRLVETFGWNLITFKSKVDV-------TKME--PFQADTVLCDIG-ESNPTAAVEAS 168 (276)
T ss_dssp HTS-TTEEEEEEEC-CCCTTSCCCCCCCCTTGGGEEEECSCCG-------GGCC--CCCCSEEEECCC-CCCSCHHHHHH
T ss_pred HHc-CCEEEEECch-hhhhhhhchhhhhhcCCCeEEEeccCcH-------hhCC--CCCcCEEEECCC-cCCCchhhhHH
Confidence 344 7899999999 86655442 2 67777 6665 6654 788999999877 433 333
Q ss_pred ---HHHHHHHHHhcCCCe--EEEEEeCC
Q 035840 67 ---QFYKQVKWVLKKPNG--VIAAWTYT 89 (213)
Q Consensus 67 ---~~~~e~~rvLk~pgG--~l~~~~~~ 89 (213)
.++.++.|+|| ||| .|++-.+.
T Consensus 169 ~~l~~L~~~~r~Lk-pGG~~~~v~~~~~ 195 (276)
T 2wa2_A 169 RTLTVLNVISRWLE-YNQGCGFCVKVLN 195 (276)
T ss_dssp HHHHHHHHHHHHHH-HSTTCEEEEEESC
T ss_pred HHHHHHHHHHHHhc-cCCCcEEEEEeCC
Confidence 47999999999 999 88875555
No 146
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=98.59 E-value=6.5e-08 Score=77.67 Aligned_cols=78 Identities=13% Similarity=0.100 Sum_probs=58.6
Q ss_pred cccCC-eEEEEeCCHHHHHHhhcC-------CCceEEecCCCCcchhhccCC--CCCCceeeeeechhhccC--------
Q 035840 2 AKIYK-NVIATDTSPKQLEFAIKL-------PNIRYQLTPPTMSITELEQNV--ATQSSVDLVTIAAALHWF-------- 63 (213)
Q Consensus 2 a~~~~-~V~gvD~S~~ml~~Ar~~-------~~v~~~~~~~~~~~~d~~~~~--~~~~sfDlV~~~~~~hw~-------- 63 (213)
|..+. +|+|+|+|+.|++.|++. .++++..+++ .+.+ +++++||+|+++-.++..
T Consensus 68 a~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~-------~~~~~~~~~~~fD~Ii~npPy~~~~~~~~~~~ 140 (259)
T 3lpm_A 68 STRTKAKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDL-------KKITDLIPKERADIVTCNPPYFATPDTSLKNT 140 (259)
T ss_dssp HTTCCCEEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCG-------GGGGGTSCTTCEEEEEECCCC-----------
T ss_pred HHhcCCcEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcH-------HHhhhhhccCCccEEEECCCCCCCccccCCCC
Confidence 33444 999999999999999972 2588888877 4443 567899999996433211
Q ss_pred -------------ChhHHHHHHHHHhcCCCeEEEEEe
Q 035840 64 -------------DLPQFYKQVKWVLKKPNGVIAAWT 87 (213)
Q Consensus 64 -------------d~~~~~~e~~rvLk~pgG~l~~~~ 87 (213)
+...++.++.++|| |||.+++..
T Consensus 141 ~~~~~~a~~~~~~~~~~~l~~~~~~Lk-pgG~l~~~~ 176 (259)
T 3lpm_A 141 NEHFRIARHEVMCTLEDTIRVAASLLK-QGGKANFVH 176 (259)
T ss_dssp ------------HHHHHHHHHHHHHEE-EEEEEEEEE
T ss_pred chHHHhhhccccCCHHHHHHHHHHHcc-CCcEEEEEE
Confidence 34679999999999 999998753
No 147
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=98.58 E-value=1.3e-07 Score=79.95 Aligned_cols=75 Identities=15% Similarity=0.111 Sum_probs=61.8
Q ss_pred CeEEEEeCCHHHHHHhhcC-------CCceEEecCCCCcchhhccCCCCCCceeeeeechhhccC-Chh--HHHHHHHHH
Q 035840 6 KNVIATDTSPKQLEFAIKL-------PNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWF-DLP--QFYKQVKWV 75 (213)
Q Consensus 6 ~~V~gvD~S~~ml~~Ar~~-------~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~-d~~--~~~~e~~rv 75 (213)
.+++++|+ +.|++.|++. ++++|..++. . .+++. +||+|++..++|++ |.. +++++++++
T Consensus 227 ~~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~-------~-~~~p~-~~D~v~~~~vlh~~~d~~~~~~L~~~~~~ 296 (369)
T 3gwz_A 227 LRGTLLER-PPVAEEARELLTGRGLADRCEILPGDF-------F-ETIPD-GADVYLIKHVLHDWDDDDVVRILRRIATA 296 (369)
T ss_dssp CEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCT-------T-TCCCS-SCSEEEEESCGGGSCHHHHHHHHHHHHTT
T ss_pred CeEEEEcC-HHHHHHHHHhhhhcCcCCceEEeccCC-------C-CCCCC-CceEEEhhhhhccCCHHHHHHHHHHHHHH
Confidence 48999999 9999999972 5689999887 4 34555 79999999999977 443 699999999
Q ss_pred hcCCCeEEEEEeCCCC
Q 035840 76 LKKPNGVIAAWTYTMP 91 (213)
Q Consensus 76 Lk~pgG~l~~~~~~~~ 91 (213)
|| |||.|++.....+
T Consensus 297 L~-pgG~l~i~e~~~~ 311 (369)
T 3gwz_A 297 MK-PDSRLLVIDNLID 311 (369)
T ss_dssp CC-TTCEEEEEEEBCC
T ss_pred cC-CCCEEEEEEeccC
Confidence 99 9999998766543
No 148
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=98.58 E-value=6.5e-08 Score=82.07 Aligned_cols=73 Identities=18% Similarity=0.133 Sum_probs=59.0
Q ss_pred ccCC-eEEEEeCCHHHHHHhhcC-------CCceEEecCCCCcchhhccCCCCCCceeeeeechhhccC----ChhHHHH
Q 035840 3 KIYK-NVIATDTSPKQLEFAIKL-------PNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWF----DLPQFYK 70 (213)
Q Consensus 3 ~~~~-~V~gvD~S~~ml~~Ar~~-------~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~----d~~~~~~ 70 (213)
+... +|+|+|+| .|++.|++. .++++..+++ ++++++ ++||+|++....|+. +...++.
T Consensus 83 ~~g~~~V~gvD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~-------~~~~~~-~~~D~Iv~~~~~~~l~~e~~~~~~l~ 153 (376)
T 3r0q_C 83 QAGARKVYAVEAT-KMADHARALVKANNLDHIVEVIEGSV-------EDISLP-EKVDVIISEWMGYFLLRESMFDSVIS 153 (376)
T ss_dssp HTTCSEEEEEESS-TTHHHHHHHHHHTTCTTTEEEEESCG-------GGCCCS-SCEEEEEECCCBTTBTTTCTHHHHHH
T ss_pred hcCCCEEEEEccH-HHHHHHHHHHHHcCCCCeEEEEECch-------hhcCcC-CcceEEEEcChhhcccchHHHHHHHH
Confidence 3444 99999999 999999973 3478888887 777776 789999996655554 4778999
Q ss_pred HHHHHhcCCCeEEEE
Q 035840 71 QVKWVLKKPNGVIAA 85 (213)
Q Consensus 71 e~~rvLk~pgG~l~~ 85 (213)
++.|+|| |||.|++
T Consensus 154 ~~~~~Lk-pgG~li~ 167 (376)
T 3r0q_C 154 ARDRWLK-PTGVMYP 167 (376)
T ss_dssp HHHHHEE-EEEEEES
T ss_pred HHHhhCC-CCeEEEE
Confidence 9999999 9999864
No 149
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=98.56 E-value=9.5e-08 Score=79.35 Aligned_cols=74 Identities=11% Similarity=0.055 Sum_probs=61.3
Q ss_pred CeEEEEeCCHHHHHHhhcC-------CCceEEecCCCCcchhhccCCCCCCceeeeeechhhc-cCChh--HHHHHHHHH
Q 035840 6 KNVIATDTSPKQLEFAIKL-------PNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALH-WFDLP--QFYKQVKWV 75 (213)
Q Consensus 6 ~~V~gvD~S~~ml~~Ar~~-------~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~h-w~d~~--~~~~e~~rv 75 (213)
.+++|+|+ +.|++.|++. +++++..++. .+ +++ ++||+|++..++| |-+.. ++++++.++
T Consensus 192 ~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~-------~~-~~~-~~~D~v~~~~vl~~~~~~~~~~~l~~~~~~ 261 (334)
T 2ip2_A 192 ARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDM-------LQ-EVP-SNGDIYLLSRIIGDLDEAASLRLLGNCREA 261 (334)
T ss_dssp CEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCT-------TT-CCC-SSCSEEEEESCGGGCCHHHHHHHHHHHHHH
T ss_pred CEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCC-------CC-CCC-CCCCEEEEchhccCCCHHHHHHHHHHHHHh
Confidence 48999999 9999999873 4688999877 44 444 6799999999998 54554 999999999
Q ss_pred hcCCCeEEEEEeCCC
Q 035840 76 LKKPNGVIAAWTYTM 90 (213)
Q Consensus 76 Lk~pgG~l~~~~~~~ 90 (213)
|| |||.|++.....
T Consensus 262 L~-pgG~l~i~e~~~ 275 (334)
T 2ip2_A 262 MA-GDGRVVVIERTI 275 (334)
T ss_dssp SC-TTCEEEEEECCB
T ss_pred cC-CCCEEEEEEecc
Confidence 99 999999887653
No 150
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=98.56 E-value=1.1e-07 Score=79.05 Aligned_cols=70 Identities=23% Similarity=0.187 Sum_probs=57.4
Q ss_pred CeEEEEeCCHHHHHHhhcC-------CCceEEecCCCCcchhhccCCCCCCceeeeeechh---hccC-ChhHHHHHHHH
Q 035840 6 KNVIATDTSPKQLEFAIKL-------PNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAA---LHWF-DLPQFYKQVKW 74 (213)
Q Consensus 6 ~~V~gvD~S~~ml~~Ar~~-------~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~---~hw~-d~~~~~~e~~r 74 (213)
.+|+|+|+| .|++.|++. .++++..+++ +++++++++||+|++... ++.. +...++.++.|
T Consensus 62 ~~v~~vD~s-~~~~~a~~~~~~~~~~~~i~~~~~d~-------~~~~~~~~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~ 133 (328)
T 1g6q_1 62 KHVIGVDMS-SIIEMAKELVELNGFSDKITLLRGKL-------EDVHLPFPKVDIIISEWMGYFLLYESMMDTVLYARDH 133 (328)
T ss_dssp SEEEEEESS-THHHHHHHHHHHTTCTTTEEEEESCT-------TTSCCSSSCEEEEEECCCBTTBSTTCCHHHHHHHHHH
T ss_pred CEEEEEChH-HHHHHHHHHHHHcCCCCCEEEEECch-------hhccCCCCcccEEEEeCchhhcccHHHHHHHHHHHHh
Confidence 489999999 599999872 3588888887 777788889999998743 3333 67889999999
Q ss_pred HhcCCCeEEE
Q 035840 75 VLKKPNGVIA 84 (213)
Q Consensus 75 vLk~pgG~l~ 84 (213)
+|| |||.++
T Consensus 134 ~Lk-pgG~li 142 (328)
T 1g6q_1 134 YLV-EGGLIF 142 (328)
T ss_dssp HEE-EEEEEE
T ss_pred hcC-CCeEEE
Confidence 999 999986
No 151
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=98.56 E-value=1.4e-07 Score=74.03 Aligned_cols=74 Identities=20% Similarity=0.109 Sum_probs=54.4
Q ss_pred CeEEEEeCCHHHHHHhhc----CCCceEEecCCCCcchhhccCCCCCCceeeeeechhhccCChhHH-HHHHHHHhcCCC
Q 035840 6 KNVIATDTSPKQLEFAIK----LPNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWFDLPQF-YKQVKWVLKKPN 80 (213)
Q Consensus 6 ~~V~gvD~S~~ml~~Ar~----~~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~d~~~~-~~e~~rvLk~pg 80 (213)
++|+|+|+|+.|++.+++ .+++++..++++. .......+++||+|++... ..+.... +.++.++|| ||
T Consensus 99 ~~v~~vD~s~~~~~~~~~~~~~~~~v~~~~~d~~~----~~~~~~~~~~~D~v~~~~~--~~~~~~~~l~~~~~~Lk-pg 171 (227)
T 1g8a_A 99 GKIFGIEFSPRVLRELVPIVEERRNIVPILGDATK----PEEYRALVPKVDVIFEDVA--QPTQAKILIDNAEVYLK-RG 171 (227)
T ss_dssp SEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTC----GGGGTTTCCCEEEEEECCC--STTHHHHHHHHHHHHEE-EE
T ss_pred eEEEEEECCHHHHHHHHHHHhccCCCEEEEccCCC----cchhhcccCCceEEEECCC--CHhHHHHHHHHHHHhcC-CC
Confidence 699999999998888765 3688999988731 1111122458999997654 2344445 999999999 99
Q ss_pred eEEEEE
Q 035840 81 GVIAAW 86 (213)
Q Consensus 81 G~l~~~ 86 (213)
|.+++.
T Consensus 172 G~l~~~ 177 (227)
T 1g8a_A 172 GYGMIA 177 (227)
T ss_dssp EEEEEE
T ss_pred CEEEEE
Confidence 999876
No 152
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=98.56 E-value=5.9e-08 Score=76.69 Aligned_cols=74 Identities=18% Similarity=0.186 Sum_probs=58.2
Q ss_pred CCeEEEEeCCHHHHHHhhcC-------CCceEEecCCCCcchhhccCC-CCCCceeeeeechhhccCChhHHHHHHHHHh
Q 035840 5 YKNVIATDTSPKQLEFAIKL-------PNIRYQLTPPTMSITELEQNV-ATQSSVDLVTIAAALHWFDLPQFYKQVKWVL 76 (213)
Q Consensus 5 ~~~V~gvD~S~~ml~~Ar~~-------~~v~~~~~~~~~~~~d~~~~~-~~~~sfDlV~~~~~~hw~d~~~~~~e~~rvL 76 (213)
..+|+|+|+|+.|++.|++. +++++..+++. +.++ ..+++||+|++... .-+...+++++.++|
T Consensus 95 ~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~------~~~~~~~~~~fD~V~~~~~--~~~~~~~l~~~~~~L 166 (232)
T 3ntv_A 95 DIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNAL------EQFENVNDKVYDMIFIDAA--KAQSKKFFEIYTPLL 166 (232)
T ss_dssp TCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGG------GCHHHHTTSCEEEEEEETT--SSSHHHHHHHHGGGE
T ss_pred CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHH------HHHHhhccCCccEEEEcCc--HHHHHHHHHHHHHhc
Confidence 57999999999999999972 37899998882 2222 23678999996532 227788999999999
Q ss_pred cCCCeEEEEEe
Q 035840 77 KKPNGVIAAWT 87 (213)
Q Consensus 77 k~pgG~l~~~~ 87 (213)
| |||.|++-+
T Consensus 167 k-pgG~lv~d~ 176 (232)
T 3ntv_A 167 K-HQGLVITDN 176 (232)
T ss_dssp E-EEEEEEEEC
T ss_pred C-CCeEEEEee
Confidence 9 999997743
No 153
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=98.55 E-value=7.7e-08 Score=73.85 Aligned_cols=72 Identities=14% Similarity=0.200 Sum_probs=55.3
Q ss_pred CCeEEEEeCCHHHHHHhhcCCCceEEecCCCCcchhhccCC-------------------------CCCCceeeeeechh
Q 035840 5 YKNVIATDTSPKQLEFAIKLPNIRYQLTPPTMSITELEQNV-------------------------ATQSSVDLVTIAAA 59 (213)
Q Consensus 5 ~~~V~gvD~S~~ml~~Ar~~~~v~~~~~~~~~~~~d~~~~~-------------------------~~~~sfDlV~~~~~ 59 (213)
..+|+|+|+|+.+ ..+++++..+++ .+.+ +++++||+|++..+
T Consensus 48 ~~~v~gvD~s~~~-----~~~~v~~~~~d~-------~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~fD~v~~~~~ 115 (201)
T 2plw_A 48 KNKIIGIDKKIMD-----PIPNVYFIQGEI-------GKDNMNNIKNINYIDNMNNNSVDYKLKEILQDKKIDIILSDAA 115 (201)
T ss_dssp CEEEEEEESSCCC-----CCTTCEEEECCT-------TTTSSCCC-----------CHHHHHHHHHHTTCCEEEEEECCC
T ss_pred CceEEEEeCCccC-----CCCCceEEEccc-------cchhhhhhccccccccccchhhHHHHHhhcCCCcccEEEeCCC
Confidence 3689999999932 246788888877 4443 46778999999998
Q ss_pred hccC-----Chh-------HHHHHHHHHhcCCCeEEEEEeCC
Q 035840 60 LHWF-----DLP-------QFYKQVKWVLKKPNGVIAAWTYT 89 (213)
Q Consensus 60 ~hw~-----d~~-------~~~~e~~rvLk~pgG~l~~~~~~ 89 (213)
+||. |.. .++.++.++|| |||.|++..+.
T Consensus 116 ~~~~g~~~~d~~~~~~~~~~~l~~~~~~Lk-pgG~lv~~~~~ 156 (201)
T 2plw_A 116 VPCIGNKIDDHLNSCELTLSITHFMEQYIN-IGGTYIVKMYL 156 (201)
T ss_dssp CCCCSCHHHHHHHHHHHHHHHHHHHHHHEE-EEEEEEEEEEC
T ss_pred cCCCCCcccCHHHHHHHHHHHHHHHHHHcc-CCCEEEEEEeC
Confidence 8884 333 37899999999 99999875544
No 154
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=98.55 E-value=2.4e-08 Score=80.90 Aligned_cols=72 Identities=7% Similarity=-0.119 Sum_probs=53.4
Q ss_pred CeEEEEeCCHHHHHHhhcC--C------CceEE--ecCCCCcchhhccCCCCCCceeeeeechhhccC-----Chh---H
Q 035840 6 KNVIATDTSPKQLEFAIKL--P------NIRYQ--LTPPTMSITELEQNVATQSSVDLVTIAAALHWF-----DLP---Q 67 (213)
Q Consensus 6 ~~V~gvD~S~~ml~~Ar~~--~------~v~~~--~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~-----d~~---~ 67 (213)
++|+|||+|+ |+..|++. + ++.+. ++++ .+++ +++||+|++..+ +.. |.. .
T Consensus 96 ~~V~gvD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~-------~~l~--~~~fD~V~sd~~-~~~~~~~~d~~~~l~ 164 (265)
T 2oxt_A 96 PHVMDVRAYT-LGVGGHEVPRITESYGWNIVKFKSRVDI-------HTLP--VERTDVIMCDVG-ESSPKWSVESERTIK 164 (265)
T ss_dssp TTEEEEEEEC-CCCSSCCCCCCCCBTTGGGEEEECSCCT-------TTSC--CCCCSEEEECCC-CCCSCHHHHHHHHHH
T ss_pred CcEEEEECch-hhhhhhhhhhhhhccCCCeEEEecccCH-------hHCC--CCCCcEEEEeCc-ccCCccchhHHHHHH
Confidence 7899999999 76555432 2 67777 6666 5544 788999999877 433 333 3
Q ss_pred HHHHHHHHhcCCCe--EEEEEeCC
Q 035840 68 FYKQVKWVLKKPNG--VIAAWTYT 89 (213)
Q Consensus 68 ~~~e~~rvLk~pgG--~l~~~~~~ 89 (213)
++.++.|+|| ||| .|++-.+.
T Consensus 165 ~L~~~~r~Lk-pGG~~~fv~kv~~ 187 (265)
T 2oxt_A 165 ILELLEKWKV-KNPSADFVVKVLC 187 (265)
T ss_dssp HHHHHHHHHH-HCTTCEEEEEESC
T ss_pred HHHHHHHHhc-cCCCeEEEEEeCC
Confidence 8999999999 999 88875555
No 155
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=98.55 E-value=1e-07 Score=80.69 Aligned_cols=72 Identities=13% Similarity=0.012 Sum_probs=57.7
Q ss_pred CeEEEEeCCHHHHHHhhcC------CCceEEecCCCCcchhhcc-CCC-CCCceeeeeechhhccCChhHHHHHHHHHhc
Q 035840 6 KNVIATDTSPKQLEFAIKL------PNIRYQLTPPTMSITELEQ-NVA-TQSSVDLVTIAAALHWFDLPQFYKQVKWVLK 77 (213)
Q Consensus 6 ~~V~gvD~S~~ml~~Ar~~------~~v~~~~~~~~~~~~d~~~-~~~-~~~sfDlV~~~~~~hw~d~~~~~~e~~rvLk 77 (213)
.+|+|+|+|+.|++.|++. .++++..+|+ .+ +|. .+++||+|++..-+++.....++.++.++||
T Consensus 196 ~~v~~vDi~~~~l~~a~~~~~~~g~~~v~~~~~D~-------~~~l~~~~~~~fD~Vi~~~p~~~~~~~~~l~~~~~~Lk 268 (373)
T 2qm3_A 196 KRIAVLDIDERLTKFIEKAANEIGYEDIEIFTFDL-------RKPLPDYALHKFDTFITDPPETLEAIRAFVGRGIATLK 268 (373)
T ss_dssp SEEEEECSCHHHHHHHHHHHHHHTCCCEEEECCCT-------TSCCCTTTSSCBSEEEECCCSSHHHHHHHHHHHHHTBC
T ss_pred CEEEEEECCHHHHHHHHHHHHHcCCCCEEEEEChh-------hhhchhhccCCccEEEECCCCchHHHHHHHHHHHHHcc
Confidence 5999999999999999973 3688888887 55 553 3568999999866654445889999999999
Q ss_pred CCCeEEEE
Q 035840 78 KPNGVIAA 85 (213)
Q Consensus 78 ~pgG~l~~ 85 (213)
|||++++
T Consensus 269 -pgG~~~~ 275 (373)
T 2qm3_A 269 -GPRCAGY 275 (373)
T ss_dssp -STTCEEE
T ss_pred -cCCeEEE
Confidence 9996533
No 156
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=98.55 E-value=1e-07 Score=77.26 Aligned_cols=72 Identities=19% Similarity=0.170 Sum_probs=60.2
Q ss_pred CeEEEEeCCHHHHHHhhcC------CCceEEecCCCCcchhhccCCCCCCceeeeeechhhccCChhHHHHHHHHHhcCC
Q 035840 6 KNVIATDTSPKQLEFAIKL------PNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWFDLPQFYKQVKWVLKKP 79 (213)
Q Consensus 6 ~~V~gvD~S~~ml~~Ar~~------~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~d~~~~~~e~~rvLk~p 79 (213)
.+|+|+|+|+.|++.|++. +++.+..+++ .+.+. +++||+|++.... +....+.++.++|| |
T Consensus 144 ~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~-------~~~~~-~~~~D~Vi~d~p~---~~~~~l~~~~~~Lk-p 211 (272)
T 3a27_A 144 KLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADN-------RDVEL-KDVADRVIMGYVH---KTHKFLDKTFEFLK-D 211 (272)
T ss_dssp SEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCG-------GGCCC-TTCEEEEEECCCS---SGGGGHHHHHHHEE-E
T ss_pred CEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECCh-------HHcCc-cCCceEEEECCcc---cHHHHHHHHHHHcC-C
Confidence 3999999999999999972 5788888888 55533 6789999987654 78899999999999 9
Q ss_pred CeEEEEEeCC
Q 035840 80 NGVIAAWTYT 89 (213)
Q Consensus 80 gG~l~~~~~~ 89 (213)
||.+++.++.
T Consensus 212 gG~l~~s~~~ 221 (272)
T 3a27_A 212 RGVIHYHETV 221 (272)
T ss_dssp EEEEEEEEEE
T ss_pred CCEEEEEEcC
Confidence 9999887765
No 157
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=98.55 E-value=9.9e-08 Score=75.07 Aligned_cols=74 Identities=18% Similarity=0.210 Sum_probs=57.2
Q ss_pred CCeEEEEeCCHHHHHHhhcC--------CCceEEecCCCCcchhhccCC-CCCCceeeeeechhhccCChhHHHHHHHHH
Q 035840 5 YKNVIATDTSPKQLEFAIKL--------PNIRYQLTPPTMSITELEQNV-ATQSSVDLVTIAAALHWFDLPQFYKQVKWV 75 (213)
Q Consensus 5 ~~~V~gvD~S~~ml~~Ar~~--------~~v~~~~~~~~~~~~d~~~~~-~~~~sfDlV~~~~~~hw~d~~~~~~e~~rv 75 (213)
.++|+|+|+|+.|++.|++. +++++..+++. +.++ +++++||+|++.... -+....++++.|+
T Consensus 81 ~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~------~~l~~~~~~~fD~V~~d~~~--~~~~~~l~~~~~~ 152 (221)
T 3dr5_A 81 NTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPL------DVMSRLANDSYQLVFGQVSP--MDLKALVDAAWPL 152 (221)
T ss_dssp TSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHH------HHGGGSCTTCEEEEEECCCT--TTHHHHHHHHHHH
T ss_pred CCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHH------HHHHHhcCCCcCeEEEcCcH--HHHHHHHHHHHHH
Confidence 57999999999999999972 36888888872 2222 446889999975422 1677899999999
Q ss_pred hcCCCeEEEEEe
Q 035840 76 LKKPNGVIAAWT 87 (213)
Q Consensus 76 Lk~pgG~l~~~~ 87 (213)
|| |||.|++-+
T Consensus 153 Lk-pGG~lv~dn 163 (221)
T 3dr5_A 153 LR-RGGALVLAD 163 (221)
T ss_dssp EE-EEEEEEETT
T ss_pred cC-CCcEEEEeC
Confidence 99 999997743
No 158
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=98.55 E-value=1.2e-07 Score=77.83 Aligned_cols=76 Identities=14% Similarity=0.246 Sum_probs=55.5
Q ss_pred CCeEEEEeCCHHHHHHhhcC-----------CCceEEecCCCCcchhhccCCCCCCceeeeeechhhccC-C----hhHH
Q 035840 5 YKNVIATDTSPKQLEFAIKL-----------PNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWF-D----LPQF 68 (213)
Q Consensus 5 ~~~V~gvD~S~~ml~~Ar~~-----------~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~-d----~~~~ 68 (213)
..+|++||+|+.|++.|++. +++++..+|+. +-+...+++||+|++...-++. . ...+
T Consensus 107 ~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~------~~l~~~~~~fDvIi~D~~~p~~~~~~l~~~~f 180 (294)
T 3adn_A 107 VESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGV------NFVNQTSQTFDVIISDCTDPIGPGESLFTSAF 180 (294)
T ss_dssp CCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSC------C---CCCCCEEEEEECC----------CCHHH
T ss_pred CCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHH------HHHhhcCCCccEEEECCCCccCcchhccHHHH
Confidence 46899999999999999972 36788888872 2233456889999986554443 1 1679
Q ss_pred HHHHHHHhcCCCeEEEEEe
Q 035840 69 YKQVKWVLKKPNGVIAAWT 87 (213)
Q Consensus 69 ~~e~~rvLk~pgG~l~~~~ 87 (213)
++++.|+|| |||.|++..
T Consensus 181 ~~~~~~~Lk-pgG~lv~~~ 198 (294)
T 3adn_A 181 YEGCKRCLN-PGGIFVAQN 198 (294)
T ss_dssp HHHHHHTEE-EEEEEEEEE
T ss_pred HHHHHHhcC-CCCEEEEec
Confidence 999999999 999998765
No 159
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=98.54 E-value=1.3e-07 Score=79.48 Aligned_cols=74 Identities=9% Similarity=0.069 Sum_probs=61.3
Q ss_pred CeEEEEeCCHHHHHHhhcC------C-CceEEecCCCCcchhhccCCCCCCceeeeeechhhccC-C--hhHHHHHHHHH
Q 035840 6 KNVIATDTSPKQLEFAIKL------P-NIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWF-D--LPQFYKQVKWV 75 (213)
Q Consensus 6 ~~V~gvD~S~~ml~~Ar~~------~-~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~-d--~~~~~~e~~rv 75 (213)
.+|+|+|+ +.|++.|++. + ++++..+++ .+.++++. |+|++..++|.+ | ..++++++.++
T Consensus 215 ~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~-------~~~~~~~~--D~v~~~~vlh~~~d~~~~~~l~~~~~~ 284 (359)
T 1x19_A 215 LDSTILNL-PGAIDLVNENAAEKGVADRMRGIAVDI-------YKESYPEA--DAVLFCRILYSANEQLSTIMCKKAFDA 284 (359)
T ss_dssp CEEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCT-------TTSCCCCC--SEEEEESCGGGSCHHHHHHHHHHHHTT
T ss_pred CeEEEEec-HHHHHHHHHHHHhcCCCCCEEEEeCcc-------ccCCCCCC--CEEEEechhccCCHHHHHHHHHHHHHh
Confidence 48999999 9999999862 3 488988887 55566654 999999999855 5 78999999999
Q ss_pred hcCCCeEEEEEeCCC
Q 035840 76 LKKPNGVIAAWTYTM 90 (213)
Q Consensus 76 Lk~pgG~l~~~~~~~ 90 (213)
|| |||.|++.....
T Consensus 285 L~-pgG~l~i~e~~~ 298 (359)
T 1x19_A 285 MR-SGGRLLILDMVI 298 (359)
T ss_dssp CC-TTCEEEEEEECC
T ss_pred cC-CCCEEEEEeccc
Confidence 99 999998876553
No 160
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=98.53 E-value=3.9e-08 Score=77.01 Aligned_cols=82 Identities=10% Similarity=0.104 Sum_probs=60.2
Q ss_pred CCeEEEEeCCHHHHHHhhcC-------CCceEEecCCCCcchhhccCC--CCCCceeeeeechhhccC-ChhHHHHHHHH
Q 035840 5 YKNVIATDTSPKQLEFAIKL-------PNIRYQLTPPTMSITELEQNV--ATQSSVDLVTIAAALHWF-DLPQFYKQVKW 74 (213)
Q Consensus 5 ~~~V~gvD~S~~ml~~Ar~~-------~~v~~~~~~~~~~~~d~~~~~--~~~~sfDlV~~~~~~hw~-d~~~~~~e~~r 74 (213)
..+|+|+|+|+.|++.|++. .++++..+++... +..++ +..++||+|++....++. +....+.++ +
T Consensus 83 ~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---l~~~~~~~~~~~fD~V~~d~~~~~~~~~~~~~~~~-~ 158 (221)
T 3u81_A 83 GARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDL---IPQLKKKYDVDTLDMVFLDHWKDRYLPDTLLLEKC-G 158 (221)
T ss_dssp TCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHH---GGGTTTTSCCCCCSEEEECSCGGGHHHHHHHHHHT-T
T ss_pred CCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHH---HHHHHHhcCCCceEEEEEcCCcccchHHHHHHHhc-c
Confidence 56999999999999999972 3588999887210 11111 123789999988877665 666777777 9
Q ss_pred HhcCCCeEEEEEeCCCC
Q 035840 75 VLKKPNGVIAAWTYTMP 91 (213)
Q Consensus 75 vLk~pgG~l~~~~~~~~ 91 (213)
+|| |||.|++-+...+
T Consensus 159 ~Lk-pgG~lv~~~~~~~ 174 (221)
T 3u81_A 159 LLR-KGTVLLADNVIVP 174 (221)
T ss_dssp CCC-TTCEEEESCCCCC
T ss_pred ccC-CCeEEEEeCCCCc
Confidence 999 9999977655543
No 161
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=98.52 E-value=7e-08 Score=79.57 Aligned_cols=76 Identities=20% Similarity=0.196 Sum_probs=57.7
Q ss_pred CCeEEEEeCCHHHHHHhhcC----------CCceEEecCCCCcchhhccCCC--CCCceeeeeechhhccC-Ch----hH
Q 035840 5 YKNVIATDTSPKQLEFAIKL----------PNIRYQLTPPTMSITELEQNVA--TQSSVDLVTIAAALHWF-DL----PQ 67 (213)
Q Consensus 5 ~~~V~gvD~S~~ml~~Ar~~----------~~v~~~~~~~~~~~~d~~~~~~--~~~sfDlV~~~~~~hw~-d~----~~ 67 (213)
..+|+|+|+|+.|++.|++. +++++..+++ .+.+. ++++||+|++....++. +. ..
T Consensus 119 ~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~-------~~~~~~~~~~~fDvIi~d~~~~~~~~~~l~~~~ 191 (304)
T 3bwc_A 119 VEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDG-------LAFVRQTPDNTYDVVIIDTTDPAGPASKLFGEA 191 (304)
T ss_dssp CCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCH-------HHHHHSSCTTCEEEEEEECC---------CCHH
T ss_pred CCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcH-------HHHHHhccCCceeEEEECCCCccccchhhhHHH
Confidence 46999999999999999862 4688888877 44432 47889999997766653 22 68
Q ss_pred HHHHHHHHhcCCCeEEEEEeC
Q 035840 68 FYKQVKWVLKKPNGVIAAWTY 88 (213)
Q Consensus 68 ~~~e~~rvLk~pgG~l~~~~~ 88 (213)
+++++.|+|| |||.|++...
T Consensus 192 ~l~~~~~~Lk-pgG~lv~~~~ 211 (304)
T 3bwc_A 192 FYKDVLRILK-PDGICCNQGE 211 (304)
T ss_dssp HHHHHHHHEE-EEEEEEEEEC
T ss_pred HHHHHHHhcC-CCcEEEEecC
Confidence 9999999999 9999987654
No 162
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=98.52 E-value=2.6e-08 Score=88.97 Aligned_cols=80 Identities=14% Similarity=0.123 Sum_probs=63.6
Q ss_pred CcccCCeEEEEeCCHHHHHHhhcC------CCceEEecCCCCcchhhccC--CCCCCceeeeeechhhccC-ChhHH--H
Q 035840 1 LAKIYKNVIATDTSPKQLEFAIKL------PNIRYQLTPPTMSITELEQN--VATQSSVDLVTIAAALHWF-DLPQF--Y 69 (213)
Q Consensus 1 la~~~~~V~gvD~S~~ml~~Ar~~------~~v~~~~~~~~~~~~d~~~~--~~~~~sfDlV~~~~~~hw~-d~~~~--~ 69 (213)
||+.+++|+|||+|+.||+.|+.+ .+++|.++++ +++ ++++++||+|++..++|++ |+... +
T Consensus 84 la~~ga~V~giD~~~~~i~~a~~~a~~~~~~~~~~~~~~~-------~~~~~~~~~~~fD~v~~~e~~ehv~~~~~~~~~ 156 (569)
T 4azs_A 84 LASKGATIVGIDFQQENINVCRALAEENPDFAAEFRVGRI-------EEVIAALEEGEFDLAIGLSVFHHIVHLHGIDEV 156 (569)
T ss_dssp HHHTTCEEEEEESCHHHHHHHHHHHHTSTTSEEEEEECCH-------HHHHHHCCTTSCSEEEEESCHHHHHHHHCHHHH
T ss_pred HHhCCCEEEEECCCHHHHHHHHHHHHhcCCCceEEEECCH-------HHHhhhccCCCccEEEECcchhcCCCHHHHHHH
Confidence 578899999999999999999962 3588999988 555 4678899999999999999 66533 4
Q ss_pred HHHHHHhcCCCeEEEEEeC
Q 035840 70 KQVKWVLKKPNGVIAAWTY 88 (213)
Q Consensus 70 ~e~~rvLk~pgG~l~~~~~ 88 (213)
..+.+.|+ ++|...+...
T Consensus 157 ~~~~~tl~-~~~~~~~~~~ 174 (569)
T 4azs_A 157 KRLLSRLA-DVTQAVILEL 174 (569)
T ss_dssp HHHHHHHH-HHSSEEEEEC
T ss_pred HHHHHHhc-cccceeeEEe
Confidence 56777798 8887655443
No 163
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=98.52 E-value=1.4e-07 Score=79.34 Aligned_cols=72 Identities=17% Similarity=0.133 Sum_probs=61.6
Q ss_pred CeEEEEeCCHHHHHHhhcCCCceEEecCCCCcchhhccCCCCCCceeeeeechhhccC-Chh--HHHHHHHHHhcCC---
Q 035840 6 KNVIATDTSPKQLEFAIKLPNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWF-DLP--QFYKQVKWVLKKP--- 79 (213)
Q Consensus 6 ~~V~gvD~S~~ml~~Ar~~~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~-d~~--~~~~e~~rvLk~p--- 79 (213)
.+++++|+ +.|++.|++.+++++..++. .+ +++ +||+|++..++|++ |.. ++++++.++|| |
T Consensus 218 ~~~~~~D~-~~~~~~a~~~~~v~~~~~d~-------~~-~~~--~~D~v~~~~vlh~~~d~~~~~~l~~~~~~L~-p~~~ 285 (358)
T 1zg3_A 218 LKCTVFDQ-PQVVGNLTGNENLNFVGGDM-------FK-SIP--SADAVLLKWVLHDWNDEQSLKILKNSKEAIS-HKGK 285 (358)
T ss_dssp SEEEEEEC-HHHHSSCCCCSSEEEEECCT-------TT-CCC--CCSEEEEESCGGGSCHHHHHHHHHHHHHHTG-GGGG
T ss_pred CeEEEecc-HHHHhhcccCCCcEEEeCcc-------CC-CCC--CceEEEEcccccCCCHHHHHHHHHHHHHhCC-CCCC
Confidence 37999999 79999999888899999877 44 555 39999999999966 656 99999999999 9
Q ss_pred CeEEEEEeCC
Q 035840 80 NGVIAAWTYT 89 (213)
Q Consensus 80 gG~l~~~~~~ 89 (213)
||+|++....
T Consensus 286 gG~l~i~e~~ 295 (358)
T 1zg3_A 286 DGKVIIIDIS 295 (358)
T ss_dssp GCEEEEEECE
T ss_pred CcEEEEEEec
Confidence 9999887664
No 164
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=98.52 E-value=1.9e-07 Score=73.89 Aligned_cols=74 Identities=9% Similarity=0.017 Sum_probs=59.6
Q ss_pred cCCeEEEEeCCHHHHHHhhcC-------CCceEEecCCCCcchhhccCCCCCCceeeeeechhhccCChhHHHHHHHHHh
Q 035840 4 IYKNVIATDTSPKQLEFAIKL-------PNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWFDLPQFYKQVKWVL 76 (213)
Q Consensus 4 ~~~~V~gvD~S~~ml~~Ar~~-------~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~d~~~~~~e~~rvL 76 (213)
...+|+|+|+|+.|++.|++. +++++..+++ .+..+++++||+|++. .-++..++.++.++|
T Consensus 112 ~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~-------~~~~~~~~~~D~v~~~----~~~~~~~l~~~~~~L 180 (248)
T 2yvl_A 112 VAGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDF-------KDAEVPEGIFHAAFVD----VREPWHYLEKVHKSL 180 (248)
T ss_dssp HSSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCT-------TTSCCCTTCBSEEEEC----SSCGGGGHHHHHHHB
T ss_pred hCCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcCh-------hhcccCCCcccEEEEC----CcCHHHHHHHHHHHc
Confidence 367999999999999999972 4678888776 5443366789999973 237889999999999
Q ss_pred cCCCeEEEEEeCC
Q 035840 77 KKPNGVIAAWTYT 89 (213)
Q Consensus 77 k~pgG~l~~~~~~ 89 (213)
| |||.+++....
T Consensus 181 ~-~gG~l~~~~~~ 192 (248)
T 2yvl_A 181 M-EGAPVGFLLPT 192 (248)
T ss_dssp C-TTCEEEEEESS
T ss_pred C-CCCEEEEEeCC
Confidence 9 99999887654
No 165
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=98.52 E-value=8.3e-08 Score=76.66 Aligned_cols=74 Identities=12% Similarity=0.149 Sum_probs=57.6
Q ss_pred CCeEEEEeCCHHHHHHhhcC-------CCceEEecCCCCcchhhccCCC--CCCceeeeeechhhccC-ChhHHHHHHHH
Q 035840 5 YKNVIATDTSPKQLEFAIKL-------PNIRYQLTPPTMSITELEQNVA--TQSSVDLVTIAAALHWF-DLPQFYKQVKW 74 (213)
Q Consensus 5 ~~~V~gvD~S~~ml~~Ar~~-------~~v~~~~~~~~~~~~d~~~~~~--~~~sfDlV~~~~~~hw~-d~~~~~~e~~r 74 (213)
.++|+|+|+|+.|++.|++. +++++..+++. +.++. ..++||+|++.. +. +....++++.+
T Consensus 88 ~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~------~~l~~~~~~~~fD~V~~d~---~~~~~~~~l~~~~~ 158 (248)
T 3tfw_A 88 DGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPAL------QSLESLGECPAFDLIFIDA---DKPNNPHYLRWALR 158 (248)
T ss_dssp TCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHH------HHHHTCCSCCCCSEEEECS---CGGGHHHHHHHHHH
T ss_pred CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHH------HHHHhcCCCCCeEEEEECC---chHHHHHHHHHHHH
Confidence 57999999999999999973 36889998872 11222 245899999754 33 67789999999
Q ss_pred HhcCCCeEEEEEeC
Q 035840 75 VLKKPNGVIAAWTY 88 (213)
Q Consensus 75 vLk~pgG~l~~~~~ 88 (213)
+|| |||.|++-+.
T Consensus 159 ~Lk-pGG~lv~~~~ 171 (248)
T 3tfw_A 159 YSR-PGTLIIGDNV 171 (248)
T ss_dssp TCC-TTCEEEEECC
T ss_pred hcC-CCeEEEEeCC
Confidence 999 9999977544
No 166
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=98.51 E-value=1.9e-07 Score=75.19 Aligned_cols=74 Identities=11% Similarity=0.093 Sum_probs=56.7
Q ss_pred CeEEEEeCCHHHHHHhhcC-C---------CceEEecCCCCcchhhccC-------CCCCCceeeeeechhh--------
Q 035840 6 KNVIATDTSPKQLEFAIKL-P---------NIRYQLTPPTMSITELEQN-------VATQSSVDLVTIAAAL-------- 60 (213)
Q Consensus 6 ~~V~gvD~S~~ml~~Ar~~-~---------~v~~~~~~~~~~~~d~~~~-------~~~~~sfDlV~~~~~~-------- 60 (213)
.+|+|+|+|+.|++.|++. . ++++..+++ .+. ++++++||+|+++--+
T Consensus 61 ~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~-------~~~~~~~~~~~~~~~~fD~Vv~nPPy~~~~~~~~ 133 (260)
T 2ozv_A 61 AEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADV-------TLRAKARVEAGLPDEHFHHVIMNPPYNDAGDRRT 133 (260)
T ss_dssp EEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCT-------TCCHHHHHHTTCCTTCEEEEEECCCC--------
T ss_pred CeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCH-------HHHhhhhhhhccCCCCcCEEEECCCCcCCCCCCC
Confidence 5899999999999999972 1 267788777 443 3667899999997332
Q ss_pred ---------ccC--ChhHHHHHHHHHhcCCCeEEEEEe
Q 035840 61 ---------HWF--DLPQFYKQVKWVLKKPNGVIAAWT 87 (213)
Q Consensus 61 ---------hw~--d~~~~~~e~~rvLk~pgG~l~~~~ 87 (213)
|.. +...++.++.++|| |||.|++..
T Consensus 134 ~~~~~~~a~~~~~~~~~~~l~~~~~~Lk-pgG~l~~~~ 170 (260)
T 2ozv_A 134 PDALKAEAHAMTEGLFEDWIRTASAIMV-SGGQLSLIS 170 (260)
T ss_dssp -------------CCHHHHHHHHHHHEE-EEEEEEEEE
T ss_pred cCHHHHHHhhcCcCCHHHHHHHHHHHcC-CCCEEEEEE
Confidence 222 47889999999999 999998653
No 167
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=98.51 E-value=2.6e-07 Score=77.81 Aligned_cols=72 Identities=13% Similarity=0.046 Sum_probs=59.6
Q ss_pred CeEEEEeCCHHHHHHhhcC-------CCceEEecCCCCcchhhccCCCCCCceeeeeechhhccC-Ch--hHHHHHHHHH
Q 035840 6 KNVIATDTSPKQLEFAIKL-------PNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWF-DL--PQFYKQVKWV 75 (213)
Q Consensus 6 ~~V~gvD~S~~ml~~Ar~~-------~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~-d~--~~~~~e~~rv 75 (213)
.+++|+|+ +.|++.|++. .++++..+++ .+ +++.+ ||+|++..++|++ |. ..+++++.++
T Consensus 207 ~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~-------~~-~~~~~-~D~v~~~~vl~~~~~~~~~~~l~~~~~~ 276 (374)
T 1qzz_A 207 LRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDF-------FK-PLPVT-ADVVLLSFVLLNWSDEDALTILRGCVRA 276 (374)
T ss_dssp CEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCT-------TS-CCSCC-EEEEEEESCGGGSCHHHHHHHHHHHHHH
T ss_pred CEEEEEeC-HHHHHHHHHHHHhcCCCCceEEEeCCC-------CC-cCCCC-CCEEEEeccccCCCHHHHHHHHHHHHHh
Confidence 48999999 9999999872 3688998877 33 34443 9999999999876 44 3899999999
Q ss_pred hcCCCeEEEEEeC
Q 035840 76 LKKPNGVIAAWTY 88 (213)
Q Consensus 76 Lk~pgG~l~~~~~ 88 (213)
|| |||.|++...
T Consensus 277 L~-pgG~l~i~e~ 288 (374)
T 1qzz_A 277 LE-PGGRLLVLDR 288 (374)
T ss_dssp EE-EEEEEEEEEC
T ss_pred cC-CCcEEEEEec
Confidence 99 9999988776
No 168
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=98.51 E-value=4.6e-07 Score=71.88 Aligned_cols=77 Identities=21% Similarity=0.197 Sum_probs=54.4
Q ss_pred CCeEEEEeCCHHHH----HHhhcCCCceEEecCCCCcchhhccCCCCCCceeeeeechhhccCChhHHH-HHHHHHhcCC
Q 035840 5 YKNVIATDTSPKQL----EFAIKLPNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWFDLPQFY-KQVKWVLKKP 79 (213)
Q Consensus 5 ~~~V~gvD~S~~ml----~~Ar~~~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~d~~~~~-~e~~rvLk~p 79 (213)
-++|+|+|+|+.|+ +.|++++|+.+..+|+.. ........++||+|++..+. .+....+ ..+.++|| |
T Consensus 101 ~G~V~avD~s~~~l~~l~~~a~~r~nv~~i~~Da~~----~~~~~~~~~~~D~I~~d~a~--~~~~~il~~~~~~~Lk-p 173 (232)
T 3id6_C 101 NGKAYGVEFSPRVVRELLLVAQRRPNIFPLLADARF----PQSYKSVVENVDVLYVDIAQ--PDQTDIAIYNAKFFLK-V 173 (232)
T ss_dssp TSEEEEEECCHHHHHHHHHHHHHCTTEEEEECCTTC----GGGTTTTCCCEEEEEECCCC--TTHHHHHHHHHHHHEE-E
T ss_pred CCEEEEEECcHHHHHHHHHHhhhcCCeEEEEccccc----chhhhccccceEEEEecCCC--hhHHHHHHHHHHHhCC-C
Confidence 35999999999884 556667899999998831 11111224689999988665 4555555 45566999 9
Q ss_pred CeEEEEEeC
Q 035840 80 NGVIAAWTY 88 (213)
Q Consensus 80 gG~l~~~~~ 88 (213)
||.|++...
T Consensus 174 GG~lvisik 182 (232)
T 3id6_C 174 NGDMLLVIK 182 (232)
T ss_dssp EEEEEEEEC
T ss_pred CeEEEEEEc
Confidence 999987643
No 169
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=98.49 E-value=6.9e-08 Score=76.10 Aligned_cols=74 Identities=18% Similarity=0.204 Sum_probs=59.2
Q ss_pred CCeEEEEeCCHHHHHHhhcC-------CCceEEecCCCCcchhhccC-CCC--CCceeeeeechhhccCChhHHHHHHHH
Q 035840 5 YKNVIATDTSPKQLEFAIKL-------PNIRYQLTPPTMSITELEQN-VAT--QSSVDLVTIAAALHWFDLPQFYKQVKW 74 (213)
Q Consensus 5 ~~~V~gvD~S~~ml~~Ar~~-------~~v~~~~~~~~~~~~d~~~~-~~~--~~sfDlV~~~~~~hw~d~~~~~~e~~r 74 (213)
..+|+|+|+|+.|++.|++. .++++..+++ .+. +.. +++||+|++....+ +...++.++.+
T Consensus 78 ~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~-------~~~~~~~~~~~~fD~I~~~~~~~--~~~~~l~~~~~ 148 (233)
T 2gpy_A 78 EATIVSIERDERRYEEAHKHVKALGLESRIELLFGDA-------LQLGEKLELYPLFDVLFIDAAKG--QYRRFFDMYSP 148 (233)
T ss_dssp TCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCG-------GGSHHHHTTSCCEEEEEEEGGGS--CHHHHHHHHGG
T ss_pred CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCH-------HHHHHhcccCCCccEEEECCCHH--HHHHHHHHHHH
Confidence 47999999999999999973 3588888877 332 222 57899999876644 78899999999
Q ss_pred HhcCCCeEEEEEeC
Q 035840 75 VLKKPNGVIAAWTY 88 (213)
Q Consensus 75 vLk~pgG~l~~~~~ 88 (213)
+|| |||.+++.+.
T Consensus 149 ~L~-pgG~lv~~~~ 161 (233)
T 2gpy_A 149 MVR-PGGLILSDNV 161 (233)
T ss_dssp GEE-EEEEEEEETT
T ss_pred HcC-CCeEEEEEcC
Confidence 999 9999987643
No 170
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=98.49 E-value=3.5e-07 Score=72.76 Aligned_cols=76 Identities=12% Similarity=0.119 Sum_probs=57.6
Q ss_pred CeEEEEeCCHHHHHHhhc--------------CCCceEEecCCCCcchhhccCC--CCCCceeeeeechhhccCCh----
Q 035840 6 KNVIATDTSPKQLEFAIK--------------LPNIRYQLTPPTMSITELEQNV--ATQSSVDLVTIAAALHWFDL---- 65 (213)
Q Consensus 6 ~~V~gvD~S~~ml~~Ar~--------------~~~v~~~~~~~~~~~~d~~~~~--~~~~sfDlV~~~~~~hw~d~---- 65 (213)
.+|+|+|+|+.|++.|++ .+++++..+++. +.++ ++++++|.|+....-.|...
T Consensus 74 ~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~------~~l~~~~~~~~~d~v~~~~p~p~~k~~~~~ 147 (246)
T 2vdv_E 74 DLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAM------KFLPNFFEKGQLSKMFFCFPDPHFKQRKHK 147 (246)
T ss_dssp SEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTT------SCGGGTSCTTCEEEEEEESCCCC------C
T ss_pred CCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHH------HHHHHhccccccCEEEEECCCcccccchhH
Confidence 479999999999998864 257889998882 2244 77889999996544444311
Q ss_pred -----hHHHHHHHHHhcCCCeEEEEEeC
Q 035840 66 -----PQFYKQVKWVLKKPNGVIAAWTY 88 (213)
Q Consensus 66 -----~~~~~e~~rvLk~pgG~l~~~~~ 88 (213)
..++.++.++|| |||.|++.+.
T Consensus 148 ~r~~~~~~l~~~~~~Lk-pgG~l~~~td 174 (246)
T 2vdv_E 148 ARIITNTLLSEYAYVLK-EGGVVYTITD 174 (246)
T ss_dssp SSCCCHHHHHHHHHHEE-EEEEEEEEES
T ss_pred HhhccHHHHHHHHHHcC-CCCEEEEEec
Confidence 489999999999 9999987543
No 171
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=98.49 E-value=9e-08 Score=74.21 Aligned_cols=73 Identities=15% Similarity=0.288 Sum_probs=57.1
Q ss_pred CCeEEEEeCCHHHHHHhhcC-------CCceEEecCCCCcchhhccCCCCCCceeeeeechhhccCChhHHHHHHHHHhc
Q 035840 5 YKNVIATDTSPKQLEFAIKL-------PNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWFDLPQFYKQVKWVLK 77 (213)
Q Consensus 5 ~~~V~gvD~S~~ml~~Ar~~-------~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~d~~~~~~e~~rvLk 77 (213)
..+|+|+|+|+.|++.|++. +++++..+++. +.++..++ ||+|++... .-+...+++++.++||
T Consensus 81 ~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~------~~~~~~~~-fD~v~~~~~--~~~~~~~l~~~~~~Lk 151 (210)
T 3c3p_A 81 SSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPL------GIAAGQRD-IDILFMDCD--VFNGADVLERMNRCLA 151 (210)
T ss_dssp TCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHH------HHHTTCCS-EEEEEEETT--TSCHHHHHHHHGGGEE
T ss_pred CCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHH------HHhccCCC-CCEEEEcCC--hhhhHHHHHHHHHhcC
Confidence 56999999999999999972 25788888772 22244456 999998632 3388999999999999
Q ss_pred CCCeEEEEEe
Q 035840 78 KPNGVIAAWT 87 (213)
Q Consensus 78 ~pgG~l~~~~ 87 (213)
|||.+++-+
T Consensus 152 -pgG~lv~~~ 160 (210)
T 3c3p_A 152 -KNALLIAVN 160 (210)
T ss_dssp -EEEEEEEES
T ss_pred -CCeEEEEEC
Confidence 999997754
No 172
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=98.47 E-value=8.3e-08 Score=75.19 Aligned_cols=70 Identities=14% Similarity=0.074 Sum_probs=56.6
Q ss_pred CeEEEEeCCHHHHHHhhcC-----------CCceEEecCCCCcchhhccCC----CCCCceeeeeechhhccCChhHHHH
Q 035840 6 KNVIATDTSPKQLEFAIKL-----------PNIRYQLTPPTMSITELEQNV----ATQSSVDLVTIAAALHWFDLPQFYK 70 (213)
Q Consensus 6 ~~V~gvD~S~~ml~~Ar~~-----------~~v~~~~~~~~~~~~d~~~~~----~~~~sfDlV~~~~~~hw~d~~~~~~ 70 (213)
.+|+|+|+|+.|++.|++. +++++..+++ .+.. ..+++||+|++..+++++ +.
T Consensus 110 ~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~-------~~~~~~~~~~~~~fD~I~~~~~~~~~-----~~ 177 (227)
T 2pbf_A 110 SYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNI-------YQVNEEEKKELGLFDAIHVGASASEL-----PE 177 (227)
T ss_dssp CEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCG-------GGCCHHHHHHHCCEEEEEECSBBSSC-----CH
T ss_pred CEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECCh-------HhcccccCccCCCcCEEEECCchHHH-----HH
Confidence 4999999999999999873 3688888877 4443 456789999999988764 48
Q ss_pred HHHHHhcCCCeEEEEEeC
Q 035840 71 QVKWVLKKPNGVIAAWTY 88 (213)
Q Consensus 71 e~~rvLk~pgG~l~~~~~ 88 (213)
++.++|| |||.+++...
T Consensus 178 ~~~~~Lk-pgG~lv~~~~ 194 (227)
T 2pbf_A 178 ILVDLLA-ENGKLIIPIE 194 (227)
T ss_dssp HHHHHEE-EEEEEEEEEE
T ss_pred HHHHhcC-CCcEEEEEEc
Confidence 8899999 9999976543
No 173
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=98.47 E-value=1.6e-07 Score=78.59 Aligned_cols=75 Identities=19% Similarity=0.206 Sum_probs=61.0
Q ss_pred CeEEEEeCCHHHHHHhhcC-------CCceEEecCCCCcchhhccCC-CCCCceeeeeechhhccC-Ch--hHHHHHHHH
Q 035840 6 KNVIATDTSPKQLEFAIKL-------PNIRYQLTPPTMSITELEQNV-ATQSSVDLVTIAAALHWF-DL--PQFYKQVKW 74 (213)
Q Consensus 6 ~~V~gvD~S~~ml~~Ar~~-------~~v~~~~~~~~~~~~d~~~~~-~~~~sfDlV~~~~~~hw~-d~--~~~~~e~~r 74 (213)
.+++++|+ +.|++.|++. +++++..++. .+.+ +.+++||+|++..++|++ |. ..+++++++
T Consensus 204 ~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~-------~~~~~~~~~~~D~v~~~~vlh~~~~~~~~~~l~~~~~ 275 (352)
T 3mcz_A 204 LTGQIWDL-PTTRDAARKTIHAHDLGGRVEFFEKNL-------LDARNFEGGAADVVMLNDCLHYFDAREAREVIGHAAG 275 (352)
T ss_dssp CEEEEEEC-GGGHHHHHHHHHHTTCGGGEEEEECCT-------TCGGGGTTCCEEEEEEESCGGGSCHHHHHHHHHHHHH
T ss_pred CeEEEEEC-HHHHHHHHHHHHhcCCCCceEEEeCCc-------ccCcccCCCCccEEEEecccccCCHHHHHHHHHHHHH
Confidence 58999999 8899999862 3588888877 4433 245669999999999977 43 799999999
Q ss_pred HhcCCCeEEEEEeCC
Q 035840 75 VLKKPNGVIAAWTYT 89 (213)
Q Consensus 75 vLk~pgG~l~~~~~~ 89 (213)
+|| |||.|++....
T Consensus 276 ~L~-pgG~l~i~e~~ 289 (352)
T 3mcz_A 276 LVK-PGGALLILTMT 289 (352)
T ss_dssp TEE-EEEEEEEEEEC
T ss_pred HcC-CCCEEEEEEec
Confidence 999 99999987654
No 174
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=98.46 E-value=1.1e-07 Score=79.28 Aligned_cols=72 Identities=17% Similarity=0.117 Sum_probs=54.4
Q ss_pred CeEEEEeCCHHHHHHhhcC-----------------CCceEEecCCCCcchhhccC--CCCCCceeeeeechhhccCChh
Q 035840 6 KNVIATDTSPKQLEFAIKL-----------------PNIRYQLTPPTMSITELEQN--VATQSSVDLVTIAAALHWFDLP 66 (213)
Q Consensus 6 ~~V~gvD~S~~ml~~Ar~~-----------------~~v~~~~~~~~~~~~d~~~~--~~~~~sfDlV~~~~~~hw~d~~ 66 (213)
.+|+|+|+|+.|++.|++. .++++..+++ .+. ++++++||+|++... ++.
T Consensus 131 ~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~-------~~~~~~~~~~~fD~V~~~~~----~~~ 199 (336)
T 2b25_A 131 GRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDI-------SGATEDIKSLTFDAVALDML----NPH 199 (336)
T ss_dssp CEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCT-------TCCC-------EEEEEECSS----STT
T ss_pred ceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECCh-------HHcccccCCCCeeEEEECCC----CHH
Confidence 7999999999999999872 4688888887 444 466778999998543 555
Q ss_pred HHHHHHHHHhcCCCeEEEEEeCC
Q 035840 67 QFYKQVKWVLKKPNGVIAAWTYT 89 (213)
Q Consensus 67 ~~~~e~~rvLk~pgG~l~~~~~~ 89 (213)
.++.++.++|| |||.|++....
T Consensus 200 ~~l~~~~~~Lk-pgG~lv~~~~~ 221 (336)
T 2b25_A 200 VTLPVFYPHLK-HGGVCAVYVVN 221 (336)
T ss_dssp TTHHHHGGGEE-EEEEEEEEESS
T ss_pred HHHHHHHHhcC-CCcEEEEEeCC
Confidence 68999999999 99999876654
No 175
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=98.45 E-value=3.8e-07 Score=72.63 Aligned_cols=77 Identities=23% Similarity=0.232 Sum_probs=57.2
Q ss_pred CCeEEEEeCCHHHHHHhhcC---C---C-----------------------------ce-------------EEecCCCC
Q 035840 5 YKNVIATDTSPKQLEFAIKL---P---N-----------------------------IR-------------YQLTPPTM 36 (213)
Q Consensus 5 ~~~V~gvD~S~~ml~~Ar~~---~---~-----------------------------v~-------------~~~~~~~~ 36 (213)
..+|+|+|+|+.|++.|++. . + ++ +..+++
T Consensus 77 ~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~D~-- 154 (250)
T 1o9g_A 77 LRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSERFGKPSYLEAAQAARRLRERLTAEGGALPCAIRTADV-- 154 (250)
T ss_dssp EEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHTTSSCCEEEEECCT--
T ss_pred CCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhhhcccccchhhhhhhhhhhhhccccccccccceeeccc--
Confidence 35899999999999999952 2 1 55 888776
Q ss_pred cchhhccCCC-----CCCceeeeeechhhccC-C---------hhHHHHHHHHHhcCCCeEEEEEeCC
Q 035840 37 SITELEQNVA-----TQSSVDLVTIAAALHWF-D---------LPQFYKQVKWVLKKPNGVIAAWTYT 89 (213)
Q Consensus 37 ~~~d~~~~~~-----~~~sfDlV~~~~~~hw~-d---------~~~~~~e~~rvLk~pgG~l~~~~~~ 89 (213)
.+... .+++||+|+++-.++.. + ...++.++.++|| |||.|++....
T Consensus 155 -----~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~Lk-pgG~l~~~~~~ 216 (250)
T 1o9g_A 155 -----FDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASALP-AHAVIAVTDRS 216 (250)
T ss_dssp -----TCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHSC-TTCEEEEEESS
T ss_pred -----ccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHHHHHHhcC-CCcEEEEeCcc
Confidence 33211 34589999998666544 2 3489999999999 99999885444
No 176
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=98.45 E-value=2.1e-07 Score=76.39 Aligned_cols=75 Identities=20% Similarity=0.208 Sum_probs=55.5
Q ss_pred CCeEEEEeCCHHHHHHhhcC----------CCceEEecCCCCcchhhcc-CCCCCCceeeeeechhhccCC------hhH
Q 035840 5 YKNVIATDTSPKQLEFAIKL----------PNIRYQLTPPTMSITELEQ-NVATQSSVDLVTIAAALHWFD------LPQ 67 (213)
Q Consensus 5 ~~~V~gvD~S~~ml~~Ar~~----------~~v~~~~~~~~~~~~d~~~-~~~~~~sfDlV~~~~~~hw~d------~~~ 67 (213)
..+|+++|+|+.|++.|++. +++++..+|+ .+ ++..+++||+|++...-+|.. ...
T Consensus 114 ~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~-------~~~l~~~~~~fD~Ii~d~~~~~~~~~~~l~~~~ 186 (296)
T 1inl_A 114 VEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANG-------AEYVRKFKNEFDVIIIDSTDPTAGQGGHLFTEE 186 (296)
T ss_dssp CSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCH-------HHHGGGCSSCEEEEEEEC----------CCSHH
T ss_pred CCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcH-------HHHHhhCCCCceEEEEcCCCcccCchhhhhHHH
Confidence 46999999999999999862 4678888876 32 233467899999865444442 268
Q ss_pred HHHHHHHHhcCCCeEEEEEe
Q 035840 68 FYKQVKWVLKKPNGVIAAWT 87 (213)
Q Consensus 68 ~~~e~~rvLk~pgG~l~~~~ 87 (213)
+++++.++|| |||.|++..
T Consensus 187 ~l~~~~~~Lk-pgG~lv~~~ 205 (296)
T 1inl_A 187 FYQACYDALK-EDGVFSAET 205 (296)
T ss_dssp HHHHHHHHEE-EEEEEEEEC
T ss_pred HHHHHHHhcC-CCcEEEEEc
Confidence 8999999999 999998764
No 177
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=98.44 E-value=2.5e-07 Score=72.64 Aligned_cols=69 Identities=6% Similarity=-0.036 Sum_probs=56.5
Q ss_pred CeEEEEeCCHHHHHHhhcC-----------CCceEEecCCCCcchhhccCCCCC-CceeeeeechhhccCChhHHHHHHH
Q 035840 6 KNVIATDTSPKQLEFAIKL-----------PNIRYQLTPPTMSITELEQNVATQ-SSVDLVTIAAALHWFDLPQFYKQVK 73 (213)
Q Consensus 6 ~~V~gvD~S~~ml~~Ar~~-----------~~v~~~~~~~~~~~~d~~~~~~~~-~sfDlV~~~~~~hw~d~~~~~~e~~ 73 (213)
.+|+|+|+|+.|++.|++. +++++..+++ .+ ++++ ++||+|++..+++++. .++.
T Consensus 115 ~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~-------~~-~~~~~~~fD~I~~~~~~~~~~-----~~~~ 181 (227)
T 1r18_A 115 TRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDG-------RK-GYPPNAPYNAIHVGAAAPDTP-----TELI 181 (227)
T ss_dssp CEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCG-------GG-CCGGGCSEEEEEECSCBSSCC-----HHHH
T ss_pred CEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCc-------cc-CCCcCCCccEEEECCchHHHH-----HHHH
Confidence 5899999999999999862 4788888877 44 3444 7899999999998764 7899
Q ss_pred HHhcCCCeEEEEEeC
Q 035840 74 WVLKKPNGVIAAWTY 88 (213)
Q Consensus 74 rvLk~pgG~l~~~~~ 88 (213)
++|| |||.+++...
T Consensus 182 ~~Lk-pgG~lvi~~~ 195 (227)
T 1r18_A 182 NQLA-SGGRLIVPVG 195 (227)
T ss_dssp HTEE-EEEEEEEEES
T ss_pred HHhc-CCCEEEEEEe
Confidence 9999 9999976544
No 178
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=98.43 E-value=2.7e-07 Score=77.50 Aligned_cols=76 Identities=21% Similarity=0.152 Sum_probs=61.6
Q ss_pred CeEEEEeCCHHHHHHhhcC------CCceEEecCCCCcchhhccCCCCCCceeeeeechhhccC---------ChhHHHH
Q 035840 6 KNVIATDTSPKQLEFAIKL------PNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWF---------DLPQFYK 70 (213)
Q Consensus 6 ~~V~gvD~S~~ml~~Ar~~------~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~---------d~~~~~~ 70 (213)
.+|+|+|+|+.|++.|++. +++++.++++ .+++.+.++||+|+++--+++. ....++.
T Consensus 229 ~~v~g~Di~~~~i~~a~~n~~~~g~~~i~~~~~D~-------~~~~~~~~~~D~Ii~npPyg~r~~~~~~~~~~~~~~~~ 301 (354)
T 3tma_A 229 SPVYAGDLDEKRLGLAREAALASGLSWIRFLRADA-------RHLPRFFPEVDRILANPPHGLRLGRKEGLFHLYWDFLR 301 (354)
T ss_dssp SCEEEEESCHHHHHHHHHHHHHTTCTTCEEEECCG-------GGGGGTCCCCSEEEECCCSCC----CHHHHHHHHHHHH
T ss_pred ceEEEEECCHHHHHHHHHHHHHcCCCceEEEeCCh-------hhCccccCCCCEEEECCCCcCccCCcccHHHHHHHHHH
Confidence 6899999999999999972 3688888887 7777777789999996555432 1367889
Q ss_pred HHHHHhcCCCeEEEEEeCC
Q 035840 71 QVKWVLKKPNGVIAAWTYT 89 (213)
Q Consensus 71 e~~rvLk~pgG~l~~~~~~ 89 (213)
++.++|| |||.+++.+..
T Consensus 302 ~~~~~Lk-pgG~l~i~t~~ 319 (354)
T 3tma_A 302 GALALLP-PGGRVALLTLR 319 (354)
T ss_dssp HHHHTSC-TTCEEEEEESC
T ss_pred HHHHhcC-CCcEEEEEeCC
Confidence 9999999 99999987665
No 179
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=98.43 E-value=2.1e-07 Score=75.33 Aligned_cols=72 Identities=15% Similarity=0.079 Sum_probs=58.9
Q ss_pred CCeEEEEeCCHHHHHHhhcC-------CCceEEecCCCCcchhhccCCCCCCceeeeeechhhccCChhHHHHHHHHHhc
Q 035840 5 YKNVIATDTSPKQLEFAIKL-------PNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWFDLPQFYKQVKWVLK 77 (213)
Q Consensus 5 ~~~V~gvD~S~~ml~~Ar~~-------~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~d~~~~~~e~~rvLk 77 (213)
..+|+|+|+|+.|++.|++. +++++..+++ .+. +++++||+|++. .-++..++.++.++||
T Consensus 137 ~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~-------~~~-~~~~~~D~V~~~----~~~~~~~l~~~~~~L~ 204 (277)
T 1o54_A 137 SGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDI-------SEG-FDEKDVDALFLD----VPDPWNYIDKCWEALK 204 (277)
T ss_dssp TCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCG-------GGC-CSCCSEEEEEEC----CSCGGGTHHHHHHHEE
T ss_pred CcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCH-------HHc-ccCCccCEEEEC----CcCHHHHHHHHHHHcC
Confidence 46999999999999999973 3677777776 554 667789999983 3477899999999999
Q ss_pred CCCeEEEEEeCC
Q 035840 78 KPNGVIAAWTYT 89 (213)
Q Consensus 78 ~pgG~l~~~~~~ 89 (213)
|||.|++....
T Consensus 205 -pgG~l~~~~~~ 215 (277)
T 1o54_A 205 -GGGRFATVCPT 215 (277)
T ss_dssp -EEEEEEEEESS
T ss_pred -CCCEEEEEeCC
Confidence 99999887654
No 180
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=98.43 E-value=1.7e-07 Score=77.63 Aligned_cols=75 Identities=23% Similarity=0.267 Sum_probs=59.6
Q ss_pred CCeEEEEeCCHHHHHHhhcC-----------CCceEEecCCCCcchhhcc-CCCCCCceeeeeechhhcc-C-C------
Q 035840 5 YKNVIATDTSPKQLEFAIKL-----------PNIRYQLTPPTMSITELEQ-NVATQSSVDLVTIAAALHW-F-D------ 64 (213)
Q Consensus 5 ~~~V~gvD~S~~ml~~Ar~~-----------~~v~~~~~~~~~~~~d~~~-~~~~~~sfDlV~~~~~~hw-~-d------ 64 (213)
..+|++||+|+.|++.|++. +++++..+++ .+ ++..+++||+|++....++ . .
T Consensus 101 ~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~-------~~~l~~~~~~fD~Ii~d~~~~~~~~~~~~~l~ 173 (314)
T 1uir_A 101 VEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDA-------RAYLERTEERYDVVIIDLTDPVGEDNPARLLY 173 (314)
T ss_dssp CCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCH-------HHHHHHCCCCEEEEEEECCCCBSTTCGGGGGS
T ss_pred CCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchH-------HHHHHhcCCCccEEEECCCCcccccCcchhcc
Confidence 46999999999999999862 3578888877 33 2334678999999877777 1 2
Q ss_pred hhHHHHHHHHHhcCCCeEEEEEe
Q 035840 65 LPQFYKQVKWVLKKPNGVIAAWT 87 (213)
Q Consensus 65 ~~~~~~e~~rvLk~pgG~l~~~~ 87 (213)
...+++++.|+|| |||.|++..
T Consensus 174 ~~~~l~~~~~~Lk-pgG~lv~~~ 195 (314)
T 1uir_A 174 TVEFYRLVKAHLN-PGGVMGMQT 195 (314)
T ss_dssp SHHHHHHHHHTEE-EEEEEEEEE
T ss_pred HHHHHHHHHHhcC-CCcEEEEEc
Confidence 3688999999999 999998764
No 181
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=98.42 E-value=3.9e-08 Score=78.07 Aligned_cols=77 Identities=23% Similarity=0.238 Sum_probs=49.3
Q ss_pred ccC-CeEEEEeCCHHHHHHhhcC-CCceEEe-cCCCCcc-hhhccCCCCCCceeeeeechhhccCChhHHHHHHHHHhcC
Q 035840 3 KIY-KNVIATDTSPKQLEFAIKL-PNIRYQL-TPPTMSI-TELEQNVATQSSVDLVTIAAALHWFDLPQFYKQVKWVLKK 78 (213)
Q Consensus 3 ~~~-~~V~gvD~S~~ml~~Ar~~-~~v~~~~-~~~~~~~-~d~~~~~~~~~sfDlV~~~~~~hw~d~~~~~~e~~rvLk~ 78 (213)
+.. ++|+|+|+|+.|++.|++. +.+.... .++..+. .++...+++..+||++++. ...+++++.|+||
T Consensus 57 ~~g~~~V~gvDis~~ml~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~D~v~~~-------l~~~l~~i~rvLk- 128 (232)
T 3opn_A 57 QNGAKLVYALDVGTNQLAWKIRSDERVVVMEQFNFRNAVLADFEQGRPSFTSIDVSFIS-------LDLILPPLYEILE- 128 (232)
T ss_dssp HTTCSEEEEECSSCCCCCHHHHTCTTEEEECSCCGGGCCGGGCCSCCCSEEEECCSSSC-------GGGTHHHHHHHSC-
T ss_pred hcCCCEEEEEcCCHHHHHHHHHhCccccccccceEEEeCHhHcCcCCCCEEEEEEEhhh-------HHHHHHHHHHhcc-
Confidence 444 4999999999999998864 3322211 1221111 2223222344567776654 2889999999999
Q ss_pred CCeEEEEEe
Q 035840 79 PNGVIAAWT 87 (213)
Q Consensus 79 pgG~l~~~~ 87 (213)
|||.|++..
T Consensus 129 pgG~lv~~~ 137 (232)
T 3opn_A 129 KNGEVAALI 137 (232)
T ss_dssp TTCEEEEEE
T ss_pred CCCEEEEEE
Confidence 999998753
No 182
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=98.42 E-value=1.8e-07 Score=75.06 Aligned_cols=77 Identities=16% Similarity=0.076 Sum_probs=59.8
Q ss_pred cccCCeEEEEeCCHHHHHHhhcC---CC--ceEEecCCCCcchhhccCCCCCCceeeeeechhhccCChhHHHHHHHHHh
Q 035840 2 AKIYKNVIATDTSPKQLEFAIKL---PN--IRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWFDLPQFYKQVKWVL 76 (213)
Q Consensus 2 a~~~~~V~gvD~S~~ml~~Ar~~---~~--v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~d~~~~~~e~~rvL 76 (213)
++.+.+|+|+|+|+.|++.|++. .+ +++..+++ .+. +++++||+|+++...++ ....+.++.++|
T Consensus 139 a~~g~~v~gvDi~~~~v~~a~~n~~~~~~~v~~~~~d~-------~~~-~~~~~fD~Vv~n~~~~~--~~~~l~~~~~~L 208 (254)
T 2nxc_A 139 EKLGGKALGVDIDPMVLPQAEANAKRNGVRPRFLEGSL-------EAA-LPFGPFDLLVANLYAEL--HAALAPRYREAL 208 (254)
T ss_dssp HHTTCEEEEEESCGGGHHHHHHHHHHTTCCCEEEESCH-------HHH-GGGCCEEEEEEECCHHH--HHHHHHHHHHHE
T ss_pred HHhCCeEEEEECCHHHHHHHHHHHHHcCCcEEEEECCh-------hhc-CcCCCCCEEEECCcHHH--HHHHHHHHHHHc
Confidence 34456999999999999999973 12 67777766 432 45678999999876654 468899999999
Q ss_pred cCCCeEEEEEeCC
Q 035840 77 KKPNGVIAAWTYT 89 (213)
Q Consensus 77 k~pgG~l~~~~~~ 89 (213)
| |||.+++.+..
T Consensus 209 k-pgG~lils~~~ 220 (254)
T 2nxc_A 209 V-PGGRALLTGIL 220 (254)
T ss_dssp E-EEEEEEEEEEE
T ss_pred C-CCCEEEEEeec
Confidence 9 99999886544
No 183
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=98.42 E-value=3.3e-07 Score=75.90 Aligned_cols=76 Identities=12% Similarity=0.154 Sum_probs=59.4
Q ss_pred CeEEEEeCCHHHHHHhhcC------CCceEEecCCCCcchhhccC--CCCCCceeeeeechhhccC-----ChhHHHHHH
Q 035840 6 KNVIATDTSPKQLEFAIKL------PNIRYQLTPPTMSITELEQN--VATQSSVDLVTIAAALHWF-----DLPQFYKQV 72 (213)
Q Consensus 6 ~~V~gvD~S~~ml~~Ar~~------~~v~~~~~~~~~~~~d~~~~--~~~~~sfDlV~~~~~~hw~-----d~~~~~~e~ 72 (213)
.+|++||+++.|++.||++ ++++++.+|+ .++ .+++++||+|++....++- ....+++++
T Consensus 114 ~~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da-------~~~l~~~~~~~fDvIi~D~~~~~~~~~~L~t~efl~~~ 186 (317)
T 3gjy_A 114 SRNTVVELDAELARLSREWFDIPRAPRVKIRVDDA-------RMVAESFTPASRDVIIRDVFAGAITPQNFTTVEFFEHC 186 (317)
T ss_dssp CEEEEEESCHHHHHHHHHHSCCCCTTTEEEEESCH-------HHHHHTCCTTCEEEEEECCSTTSCCCGGGSBHHHHHHH
T ss_pred cEEEEEECCHHHHHHHHHhccccCCCceEEEECcH-------HHHHhhccCCCCCEEEECCCCccccchhhhHHHHHHHH
Confidence 4899999999999999983 4688888887 332 2457889999986544432 236899999
Q ss_pred HHHhcCCCeEEEEEeCC
Q 035840 73 KWVLKKPNGVIAAWTYT 89 (213)
Q Consensus 73 ~rvLk~pgG~l~~~~~~ 89 (213)
.|+|| |||.|++....
T Consensus 187 ~r~Lk-pgGvlv~~~~~ 202 (317)
T 3gjy_A 187 HRGLA-PGGLYVANCGD 202 (317)
T ss_dssp HHHEE-EEEEEEEEEEE
T ss_pred HHhcC-CCcEEEEEecC
Confidence 99999 99999876543
No 184
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=98.42 E-value=2.7e-07 Score=69.24 Aligned_cols=73 Identities=18% Similarity=0.064 Sum_probs=60.2
Q ss_pred ccCCeEEEEeCCHHHHHHhhcC------CCceEEecCCCCcchhhccCCCCCCceeeeeechhhccCChhHHHHHHHHHh
Q 035840 3 KIYKNVIATDTSPKQLEFAIKL------PNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWFDLPQFYKQVKWVL 76 (213)
Q Consensus 3 ~~~~~V~gvD~S~~ml~~Ar~~------~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~d~~~~~~e~~rvL 76 (213)
....+|+|+|+|+.|++.|++. +++++..+++ .+ ++++++||+|++... -+...+++++.++
T Consensus 55 ~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~-------~~-~~~~~~~D~i~~~~~---~~~~~~l~~~~~~- 122 (183)
T 2yxd_A 55 KRCKFVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRA-------ED-VLDKLEFNKAFIGGT---KNIEKIIEILDKK- 122 (183)
T ss_dssp TTSSEEEEEECSHHHHHHHHHHHHHTTCCSEEEEESCH-------HH-HGGGCCCSEEEECSC---SCHHHHHHHHHHT-
T ss_pred hcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCc-------cc-cccCCCCcEEEECCc---ccHHHHHHHHhhC-
Confidence 3567999999999999999973 5788888876 54 566688999999887 6888999999998
Q ss_pred cCCCeEEEEEeCC
Q 035840 77 KKPNGVIAAWTYT 89 (213)
Q Consensus 77 k~pgG~l~~~~~~ 89 (213)
|||.+++....
T Consensus 123 --~gG~l~~~~~~ 133 (183)
T 2yxd_A 123 --KINHIVANTIV 133 (183)
T ss_dssp --TCCEEEEEESC
T ss_pred --CCCEEEEEecc
Confidence 49999877654
No 185
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=98.41 E-value=2.3e-07 Score=77.52 Aligned_cols=74 Identities=15% Similarity=0.232 Sum_probs=57.2
Q ss_pred CCeEEEEeCCHHHHHHhhcC----------CCceEEecCCCCcchhhccC--CCCCCceeeeeechhhccC--C---hhH
Q 035840 5 YKNVIATDTSPKQLEFAIKL----------PNIRYQLTPPTMSITELEQN--VATQSSVDLVTIAAALHWF--D---LPQ 67 (213)
Q Consensus 5 ~~~V~gvD~S~~ml~~Ar~~----------~~v~~~~~~~~~~~~d~~~~--~~~~~sfDlV~~~~~~hw~--d---~~~ 67 (213)
..+|++||+|+.|++.|++. +++++..+++ .+. .+++++||+|++...-++- + ...
T Consensus 144 ~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~-------~~~l~~~~~~~fDlIi~d~~~p~~~~~~l~~~~ 216 (334)
T 1xj5_A 144 IEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDG-------VAFLKNAAEGSYDAVIVDSSDPIGPAKELFEKP 216 (334)
T ss_dssp CCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCH-------HHHHHTSCTTCEEEEEECCCCTTSGGGGGGSHH
T ss_pred CCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCH-------HHHHHhccCCCccEEEECCCCccCcchhhhHHH
Confidence 46999999999999999972 4688888877 332 2346789999986543222 2 468
Q ss_pred HHHHHHHHhcCCCeEEEEE
Q 035840 68 FYKQVKWVLKKPNGVIAAW 86 (213)
Q Consensus 68 ~~~e~~rvLk~pgG~l~~~ 86 (213)
+++++.|+|| |||.|++.
T Consensus 217 ~l~~~~~~Lk-pgG~lv~~ 234 (334)
T 1xj5_A 217 FFQSVARALR-PGGVVCTQ 234 (334)
T ss_dssp HHHHHHHHEE-EEEEEEEE
T ss_pred HHHHHHHhcC-CCcEEEEe
Confidence 9999999999 99999875
No 186
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=98.41 E-value=4.5e-07 Score=73.68 Aligned_cols=77 Identities=19% Similarity=0.264 Sum_probs=59.1
Q ss_pred CCeEEEEeCCHHHHHHhhcC----------CCceEEecCCCCcchhhccCCCCCCceeeeeechhhccCC-----hhHHH
Q 035840 5 YKNVIATDTSPKQLEFAIKL----------PNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWFD-----LPQFY 69 (213)
Q Consensus 5 ~~~V~gvD~S~~ml~~Ar~~----------~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~d-----~~~~~ 69 (213)
..+|++||+++.|++.|++. +++++..+|+. +-++..+++||+|++....++.. ...++
T Consensus 99 ~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~------~~l~~~~~~fD~Ii~d~~~~~~~~~~l~~~~~~ 172 (275)
T 1iy9_A 99 VKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGF------MHIAKSENQYDVIMVDSTEPVGPAVNLFTKGFY 172 (275)
T ss_dssp CSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSH------HHHHTCCSCEEEEEESCSSCCSCCCCCSTTHHH
T ss_pred CceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHH------HHHhhCCCCeeEEEECCCCCCCcchhhhHHHHH
Confidence 46999999999999999962 46888888872 21233467899999865555432 36899
Q ss_pred HHHHHHhcCCCeEEEEEeC
Q 035840 70 KQVKWVLKKPNGVIAAWTY 88 (213)
Q Consensus 70 ~e~~rvLk~pgG~l~~~~~ 88 (213)
+++.|+|| |||.+++...
T Consensus 173 ~~~~~~L~-pgG~lv~~~~ 190 (275)
T 1iy9_A 173 AGIAKALK-EDGIFVAQTD 190 (275)
T ss_dssp HHHHHHEE-EEEEEEEECC
T ss_pred HHHHHhcC-CCcEEEEEcC
Confidence 99999999 9999987643
No 187
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=98.40 E-value=2.5e-07 Score=72.36 Aligned_cols=70 Identities=16% Similarity=0.129 Sum_probs=55.8
Q ss_pred CeEEEEeCCHHHHHHhhcC-----------CCceEEecCCCCcchhhccCCCCCCceeeeeechhhccCChhHHHHHHHH
Q 035840 6 KNVIATDTSPKQLEFAIKL-----------PNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWFDLPQFYKQVKW 74 (213)
Q Consensus 6 ~~V~gvD~S~~ml~~Ar~~-----------~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~d~~~~~~e~~r 74 (213)
.+|+|+|+|+.|++.|++. .++++..+++ ...+..+++||+|++...++.+ +.++.+
T Consensus 103 ~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~-------~~~~~~~~~fD~i~~~~~~~~~-----~~~~~~ 170 (226)
T 1i1n_A 103 GKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDG-------RMGYAEEAPYDAIHVGAAAPVV-----PQALID 170 (226)
T ss_dssp CEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCG-------GGCCGGGCCEEEEEECSBBSSC-----CHHHHH
T ss_pred cEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCc-------ccCcccCCCcCEEEECCchHHH-----HHHHHH
Confidence 5999999999999999862 3688888877 5444556789999988877543 468999
Q ss_pred HhcCCCeEEEEEeC
Q 035840 75 VLKKPNGVIAAWTY 88 (213)
Q Consensus 75 vLk~pgG~l~~~~~ 88 (213)
+|| |||.+++...
T Consensus 171 ~Lk-pgG~lv~~~~ 183 (226)
T 1i1n_A 171 QLK-PGGRLILPVG 183 (226)
T ss_dssp TEE-EEEEEEEEES
T ss_pred hcC-CCcEEEEEEe
Confidence 999 9999987543
No 188
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=98.40 E-value=2.3e-07 Score=77.89 Aligned_cols=70 Identities=21% Similarity=0.219 Sum_probs=56.5
Q ss_pred CeEEEEeCCHHHHHHhhcC-------CCceEEecCCCCcchhhccCCCCCCceeeeeechhhc-cC--ChhHHHHHHHHH
Q 035840 6 KNVIATDTSPKQLEFAIKL-------PNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALH-WF--DLPQFYKQVKWV 75 (213)
Q Consensus 6 ~~V~gvD~S~~ml~~Ar~~-------~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~h-w~--d~~~~~~e~~rv 75 (213)
.+|+|+|+|+ |++.|++. +++++..+++ ++++++ ++||+|++...++ +. +....+.++.|+
T Consensus 74 ~~V~~vD~s~-~~~~a~~~~~~~~l~~~v~~~~~d~-------~~~~~~-~~~D~Ivs~~~~~~~~~~~~~~~l~~~~~~ 144 (348)
T 2y1w_A 74 RKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKV-------EEVSLP-EQVDIIISEPMGYMLFNERMLESYLHAKKY 144 (348)
T ss_dssp SEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCT-------TTCCCS-SCEEEEEECCCBTTBTTTSHHHHHHHGGGG
T ss_pred CEEEEECCHH-HHHHHHHHHHHcCCCCcEEEEEcch-------hhCCCC-CceeEEEEeCchhcCChHHHHHHHHHHHhh
Confidence 5999999996 99998862 5688888887 666655 5799999987654 54 456888999999
Q ss_pred hcCCCeEEEE
Q 035840 76 LKKPNGVIAA 85 (213)
Q Consensus 76 Lk~pgG~l~~ 85 (213)
|| |||.+++
T Consensus 145 Lk-pgG~li~ 153 (348)
T 2y1w_A 145 LK-PSGNMFP 153 (348)
T ss_dssp EE-EEEEEES
T ss_pred cC-CCeEEEE
Confidence 99 9999873
No 189
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=98.40 E-value=5.8e-07 Score=74.42 Aligned_cols=77 Identities=14% Similarity=0.060 Sum_probs=56.9
Q ss_pred CCeEEEEeCCHHHHHHhhcC------CCceEEecCCCCcchhhccCCCCCCceeeeeec---hhhccC--Ch--------
Q 035840 5 YKNVIATDTSPKQLEFAIKL------PNIRYQLTPPTMSITELEQNVATQSSVDLVTIA---AALHWF--DL-------- 65 (213)
Q Consensus 5 ~~~V~gvD~S~~ml~~Ar~~------~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~---~~~hw~--d~-------- 65 (213)
.++|+|+|+|+.|++.|++. +++++..+++ .+++..+++||+|++. .+..-+ ++
T Consensus 143 ~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~-------~~~~~~~~~fD~Il~d~Pcsg~g~~~~~p~~~~~~~~ 215 (315)
T 1ixk_A 143 DGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSS-------LHIGELNVEFDKILLDAPCTGSGTIHKNPERKWNRTM 215 (315)
T ss_dssp CSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCG-------GGGGGGCCCEEEEEEECCTTSTTTCC--------CCH
T ss_pred CCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECCh-------hhcccccccCCEEEEeCCCCCcccccCChhHhhcCCH
Confidence 36899999999999999873 4778888877 5544446689999973 222111 11
Q ss_pred ----------hHHHHHHHHHhcCCCeEEEEEeCC
Q 035840 66 ----------PQFYKQVKWVLKKPNGVIAAWTYT 89 (213)
Q Consensus 66 ----------~~~~~e~~rvLk~pgG~l~~~~~~ 89 (213)
..++.++.++|| |||.|++.+..
T Consensus 216 ~~~~~~~~~q~~~L~~~~~~Lk-pGG~lv~stcs 248 (315)
T 1ixk_A 216 DDIKFCQGLQMRLLEKGLEVLK-PGGILVYSTCS 248 (315)
T ss_dssp HHHHHHHHHHHHHHHHHHHHEE-EEEEEEEEESC
T ss_pred HHHHHHHHHHHHHHHHHHHhCC-CCCEEEEEeCC
Confidence 588999999999 99999876543
No 190
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.39 E-value=1.1e-07 Score=74.36 Aligned_cols=78 Identities=22% Similarity=0.270 Sum_probs=57.4
Q ss_pred CCeEEEEeCCHHHHHHhhcC-------CCceEEecCCCCcchhhccCC--CCCCceeeeeechhhccC-ChhHHHHHHHH
Q 035840 5 YKNVIATDTSPKQLEFAIKL-------PNIRYQLTPPTMSITELEQNV--ATQSSVDLVTIAAALHWF-DLPQFYKQVKW 74 (213)
Q Consensus 5 ~~~V~gvD~S~~ml~~Ar~~-------~~v~~~~~~~~~~~~d~~~~~--~~~~sfDlV~~~~~~hw~-d~~~~~~e~~r 74 (213)
..+|+|+|+|+.|++.|++. .++++..+++... +...+ ...++||+|++.. +. +...++.++.+
T Consensus 89 ~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~~~~~~~~~~~~fD~v~~~~---~~~~~~~~l~~~~~ 162 (225)
T 3tr6_A 89 DGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDT---LAELIHAGQAWQYDLIYIDA---DKANTDLYYEESLK 162 (225)
T ss_dssp TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHH---HHHHHTTTCTTCEEEEEECS---CGGGHHHHHHHHHH
T ss_pred CCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHH---HHHhhhccCCCCccEEEECC---CHHHHHHHHHHHHH
Confidence 57999999999999999973 3588999887210 01111 1127899999543 34 67889999999
Q ss_pred HhcCCCeEEEEEeCC
Q 035840 75 VLKKPNGVIAAWTYT 89 (213)
Q Consensus 75 vLk~pgG~l~~~~~~ 89 (213)
+|| |||.|++.+..
T Consensus 163 ~L~-pgG~lv~~~~~ 176 (225)
T 3tr6_A 163 LLR-EGGLIAVDNVL 176 (225)
T ss_dssp HEE-EEEEEEEECSS
T ss_pred hcC-CCcEEEEeCCC
Confidence 999 99999876544
No 191
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=98.39 E-value=1.4e-07 Score=72.41 Aligned_cols=76 Identities=12% Similarity=0.178 Sum_probs=59.5
Q ss_pred cccCCeEEEEeCCHHHHHHhhcC-----CCceEEecCCCCcchhhccCCCCCCceeeeeechhhccC-ChhHHHHHHHHH
Q 035840 2 AKIYKNVIATDTSPKQLEFAIKL-----PNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWF-DLPQFYKQVKWV 75 (213)
Q Consensus 2 a~~~~~V~gvD~S~~ml~~Ar~~-----~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~-d~~~~~~e~~rv 75 (213)
++.. +|+|+|+|+.|++.|++. ...++...+. ... .++++||+|.+.-.+|.+ +.+.++..+++.
T Consensus 71 ~p~a-~~~A~Di~~~~leiar~~~~~~g~~~~v~~~d~-------~~~-~~~~~~DvVLa~k~LHlL~~~~~al~~v~~~ 141 (200)
T 3fzg_A 71 NEKI-IYHAYDIDRAEIAFLSSIIGKLKTTIKYRFLNK-------ESD-VYKGTYDVVFLLKMLPVLKQQDVNILDFLQL 141 (200)
T ss_dssp SCCC-EEEEECSCHHHHHHHHHHHHHSCCSSEEEEECC-------HHH-HTTSEEEEEEEETCHHHHHHTTCCHHHHHHT
T ss_pred CCCC-EEEEEeCCHHHHHHHHHHHHhcCCCccEEEecc-------ccc-CCCCCcChhhHhhHHHhhhhhHHHHHHHHHH
Confidence 3444 999999999999999973 1223444444 332 567889999999999999 778888899999
Q ss_pred hcCCCeEEEEEe
Q 035840 76 LKKPNGVIAAWT 87 (213)
Q Consensus 76 Lk~pgG~l~~~~ 87 (213)
|| |||.|+-..
T Consensus 142 L~-pggvfISfp 152 (200)
T 3fzg_A 142 FH-TQNFVISFP 152 (200)
T ss_dssp CE-EEEEEEEEE
T ss_pred hC-CCCEEEEeC
Confidence 99 999997554
No 192
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=98.38 E-value=3.2e-08 Score=76.31 Aligned_cols=80 Identities=10% Similarity=-0.055 Sum_probs=43.2
Q ss_pred CeEEEEeCCHHHHHHhhcCCCceEEecCCCCcchhhccCCCCC-----CceeeeeechhhccC-Ch--------------
Q 035840 6 KNVIATDTSPKQLEFAIKLPNIRYQLTPPTMSITELEQNVATQ-----SSVDLVTIAAALHWF-DL-------------- 65 (213)
Q Consensus 6 ~~V~gvD~S~~ml~~Ar~~~~v~~~~~~~~~~~~d~~~~~~~~-----~sfDlV~~~~~~hw~-d~-------------- 65 (213)
.+|+|+|+|+.|++.|++..... .. ..++..+|+.+ ++++ ++||+|++.-.+++. +.
T Consensus 55 ~~v~~vD~~~~~~~~a~~~~~~~-~~-~~~~~~~d~~~-~~~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~ 131 (215)
T 4dzr_A 55 VSVTAVDLSMDALAVARRNAERF-GA-VVDWAAADGIE-WLIERAERGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRL 131 (215)
T ss_dssp EEEEEEECC---------------------CCHHHHHH-HHHHHHHTTCCBSEEEECCCCCC------------------
T ss_pred CeEEEEECCHHHHHHHHHHHHHh-CC-ceEEEEcchHh-hhhhhhhccCcccEEEECCCCCCCccccccChhhhccCccc
Confidence 48999999999999999741100 00 23344445566 5555 899999996555433 11
Q ss_pred ------------hHHHHHHHHHhcCCCeEEEEEeCC
Q 035840 66 ------------PQFYKQVKWVLKKPNGVIAAWTYT 89 (213)
Q Consensus 66 ------------~~~~~e~~rvLk~pgG~l~~~~~~ 89 (213)
..+++++.++|| |||.+++....
T Consensus 132 ~~~~~~~~~~~~~~~l~~~~~~Lk-pgG~l~~~~~~ 166 (215)
T 4dzr_A 132 ALDGGEDGLQFYRRMAALPPYVLA-RGRAGVFLEVG 166 (215)
T ss_dssp ------CTTHHHHHHHTCCGGGBC-SSSEEEEEECT
T ss_pred cccCCCcHHHHHHHHHHHHHHHhc-CCCeEEEEEEC
Confidence 678899999999 99995444443
No 193
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=98.37 E-value=4.5e-07 Score=73.39 Aligned_cols=73 Identities=15% Similarity=0.107 Sum_probs=56.7
Q ss_pred CCeEEEEeCCHHHHHHhhcC------CCceEEecCCCCcchhhccCCCCCCceeeeeechhhccC---------------
Q 035840 5 YKNVIATDTSPKQLEFAIKL------PNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWF--------------- 63 (213)
Q Consensus 5 ~~~V~gvD~S~~ml~~Ar~~------~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~--------------- 63 (213)
..+|+|+|+|+.|++.|++. +++++..+++ .+ ++++++||+|+++-.+++.
T Consensus 133 ~~~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~d~-------~~-~~~~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~ 204 (276)
T 2b3t_A 133 DCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDW-------FS-ALAGQQFAMIVSNPPYIDEQDPHLQQGDVRFEPL 204 (276)
T ss_dssp TSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCST-------TG-GGTTCCEEEEEECCCCBCTTCHHHHSSGGGSSCS
T ss_pred CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEcch-------hh-hcccCCccEEEECCCCCCccccccChhhhhcCcH
Confidence 46899999999999999973 4688888877 33 2446789999997443322
Q ss_pred -----------ChhHHHHHHHHHhcCCCeEEEEE
Q 035840 64 -----------DLPQFYKQVKWVLKKPNGVIAAW 86 (213)
Q Consensus 64 -----------d~~~~~~e~~rvLk~pgG~l~~~ 86 (213)
+....+.++.++|| |||.+++.
T Consensus 205 ~al~~~~~g~~~~~~~l~~~~~~Lk-pgG~l~~~ 237 (276)
T 2b3t_A 205 TALVAADSGMADIVHIIEQSRNALV-SGGFLLLE 237 (276)
T ss_dssp TTTBCHHHHTHHHHHHHHHHGGGEE-EEEEEEEE
T ss_pred HHHcCCCcHHHHHHHHHHHHHHhcC-CCCEEEEE
Confidence 23678899999999 99999764
No 194
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=98.37 E-value=3.9e-07 Score=75.12 Aligned_cols=75 Identities=13% Similarity=0.197 Sum_probs=55.8
Q ss_pred CCeEEEEeCCHHHHHHhhcC----------CCceEEecCCCCcchhhcc-CCCCCCceeeeeechhhccC-----ChhHH
Q 035840 5 YKNVIATDTSPKQLEFAIKL----------PNIRYQLTPPTMSITELEQ-NVATQSSVDLVTIAAALHWF-----DLPQF 68 (213)
Q Consensus 5 ~~~V~gvD~S~~ml~~Ar~~----------~~v~~~~~~~~~~~~d~~~-~~~~~~sfDlV~~~~~~hw~-----d~~~~ 68 (213)
..+|++||+|+.|++.|+++ +++++..+++ .+ ++..+++||+|++....++. ....+
T Consensus 119 ~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da-------~~~l~~~~~~fD~Ii~d~~~~~~~~~~l~~~~~ 191 (304)
T 2o07_A 119 VESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDG-------FEFMKQNQDAFDVIITDSSDPMGPAESLFKESY 191 (304)
T ss_dssp CCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCH-------HHHHHTCSSCEEEEEEECC-----------CHH
T ss_pred CCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcH-------HHHHhhCCCCceEEEECCCCCCCcchhhhHHHH
Confidence 36999999999999999862 4678888877 33 23356789999986655543 23578
Q ss_pred HHHHHHHhcCCCeEEEEEe
Q 035840 69 YKQVKWVLKKPNGVIAAWT 87 (213)
Q Consensus 69 ~~e~~rvLk~pgG~l~~~~ 87 (213)
++++.|+|| |||.|++..
T Consensus 192 l~~~~~~Lk-pgG~lv~~~ 209 (304)
T 2o07_A 192 YQLMKTALK-EDGVLCCQG 209 (304)
T ss_dssp HHHHHHHEE-EEEEEEEEE
T ss_pred HHHHHhccC-CCeEEEEec
Confidence 999999999 999998754
No 195
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=98.35 E-value=2.5e-07 Score=70.53 Aligned_cols=78 Identities=17% Similarity=0.094 Sum_probs=53.4
Q ss_pred CeEEEEeCCHHHHHHhhcCCCceEE-ecCCCCcchhhcc---CCCCCCceeeeeechhhcc----C-Ch-------hHHH
Q 035840 6 KNVIATDTSPKQLEFAIKLPNIRYQ-LTPPTMSITELEQ---NVATQSSVDLVTIAAALHW----F-DL-------PQFY 69 (213)
Q Consensus 6 ~~V~gvD~S~~ml~~Ar~~~~v~~~-~~~~~~~~~d~~~---~~~~~~sfDlV~~~~~~hw----~-d~-------~~~~ 69 (213)
.+|+|+|+|+.+ ..+++++. .+++... +... ..+++++||+|++..++++ . |. ..++
T Consensus 56 ~~v~~vD~s~~~-----~~~~~~~~~~~d~~~~--~~~~~~~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l 128 (196)
T 2nyu_A 56 GFVLGVDLLHIF-----PLEGATFLCPADVTDP--RTSQRILEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLL 128 (196)
T ss_dssp CEEEEECSSCCC-----CCTTCEEECSCCTTSH--HHHHHHHHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHH
T ss_pred ceEEEEechhcc-----cCCCCeEEEeccCCCH--HHHHHHHHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHH
Confidence 689999999942 23567888 7665211 0000 0144568999998765554 3 44 4889
Q ss_pred HHHHHHhcCCCeEEEEEeCCCC
Q 035840 70 KQVKWVLKKPNGVIAAWTYTMP 91 (213)
Q Consensus 70 ~e~~rvLk~pgG~l~~~~~~~~ 91 (213)
+++.|+|| |||.|++..+...
T Consensus 129 ~~~~~~Lk-pgG~lv~~~~~~~ 149 (196)
T 2nyu_A 129 SVTPDILQ-PGGTFLCKTWAGS 149 (196)
T ss_dssp HHHHHHEE-EEEEEEEEECCSG
T ss_pred HHHHHHhc-CCCEEEEEecCCc
Confidence 99999999 9999988766543
No 196
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=98.35 E-value=4.7e-07 Score=71.42 Aligned_cols=70 Identities=17% Similarity=0.160 Sum_probs=55.3
Q ss_pred CeEEEEeCCHHHHHHhhcC------CCceEEecCCCCcchhhccCCCCCC-ceeeeeechhhccCChhHHHHHHHHHhcC
Q 035840 6 KNVIATDTSPKQLEFAIKL------PNIRYQLTPPTMSITELEQNVATQS-SVDLVTIAAALHWFDLPQFYKQVKWVLKK 78 (213)
Q Consensus 6 ~~V~gvD~S~~ml~~Ar~~------~~v~~~~~~~~~~~~d~~~~~~~~~-sfDlV~~~~~~hw~d~~~~~~e~~rvLk~ 78 (213)
.+|+|+|+|+.|++.|++. +++++..+++ . .++++. .||+|++..+++++. .++.++||
T Consensus 115 ~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~-------~-~~~~~~~~fD~Ii~~~~~~~~~-----~~~~~~L~- 180 (235)
T 1jg1_A 115 TDVYTIERIPELVEFAKRNLERAGVKNVHVILGDG-------S-KGFPPKAPYDVIIVTAGAPKIP-----EPLIEQLK- 180 (235)
T ss_dssp SCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCG-------G-GCCGGGCCEEEEEECSBBSSCC-----HHHHHTEE-
T ss_pred CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEECCc-------c-cCCCCCCCccEEEECCcHHHHH-----HHHHHhcC-
Confidence 7999999999999999972 4678888765 2 234443 499999999998774 37899999
Q ss_pred CCeEEEEEeCC
Q 035840 79 PNGVIAAWTYT 89 (213)
Q Consensus 79 pgG~l~~~~~~ 89 (213)
|||.+++....
T Consensus 181 pgG~lvi~~~~ 191 (235)
T 1jg1_A 181 IGGKLIIPVGS 191 (235)
T ss_dssp EEEEEEEEECS
T ss_pred CCcEEEEEEec
Confidence 99999876554
No 197
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.33 E-value=9.2e-07 Score=72.39 Aligned_cols=83 Identities=11% Similarity=-0.003 Sum_probs=58.7
Q ss_pred CCeEEEEeCCHHHHHHhhcCCCceE-EecCCCCcchhhccCCCCCCceeeeeechhhccC-----C-------hhHHHHH
Q 035840 5 YKNVIATDTSPKQLEFAIKLPNIRY-QLTPPTMSITELEQNVATQSSVDLVTIAAALHWF-----D-------LPQFYKQ 71 (213)
Q Consensus 5 ~~~V~gvD~S~~ml~~Ar~~~~v~~-~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~-----d-------~~~~~~e 71 (213)
.++|+|+|+|+. .+++++ .++++ .+.+++ ++||+|++..+.++. | ...++++
T Consensus 92 ~~~V~gvDis~~-------v~~v~~~i~gD~-------~~~~~~-~~fD~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~ 156 (290)
T 2xyq_A 92 GTLLVDSDLNDF-------VSDADSTLIGDC-------ATVHTA-NKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGF 156 (290)
T ss_dssp TCEEEEEESSCC-------BCSSSEEEESCG-------GGCCCS-SCEEEEEECCCCCC---CCSCCCCCCTHHHHHHHH
T ss_pred CCEEEEEECCCC-------CCCCEEEEECcc-------ccCCcc-CcccEEEEcCCccccccccccccchHHHHHHHHHH
Confidence 468999999998 247888 88877 666554 679999987554431 1 2478999
Q ss_pred HHHHhcCCCeEEEEEeCCCCCcChHHHHhcccc
Q 035840 72 VKWVLKKPNGVIAAWTYTMPEINESVGAVFKPF 104 (213)
Q Consensus 72 ~~rvLk~pgG~l~~~~~~~~~~~~~~~~~~~~~ 104 (213)
+.|+|| |||.|++..+..... +.+..++..+
T Consensus 157 a~r~Lk-pGG~~v~~~~~~~~~-~~l~~~l~~~ 187 (290)
T 2xyq_A 157 IKQKLA-LGGSIAVKITEHSWN-ADLYKLMGHF 187 (290)
T ss_dssp HHHHEE-EEEEEEEEECSSSCC-HHHHHHHTTE
T ss_pred HHHhcC-CCcEEEEEEeccCCH-HHHHHHHHHc
Confidence 999999 999998765543322 3445555544
No 198
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=98.33 E-value=1.1e-06 Score=73.56 Aligned_cols=73 Identities=11% Similarity=0.087 Sum_probs=55.6
Q ss_pred eEEEEeCCHHHHHHhhc-----CCCceEEecCCCCcchhhccCCCCCCceeeeeechhhccC-Ch--hHHHHHHHHHhcC
Q 035840 7 NVIATDTSPKQLEFAIK-----LPNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWF-DL--PQFYKQVKWVLKK 78 (213)
Q Consensus 7 ~V~gvD~S~~ml~~Ar~-----~~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~-d~--~~~~~e~~rvLk~ 78 (213)
+++++|++ .++..++. .++++|..+++ . .+++ +||+|++..++|.+ |. .+++++++|+||
T Consensus 210 ~~~~~D~~-~~~~~~~~~~~~~~~~v~~~~~d~-------~-~~~p--~~D~v~~~~vlh~~~d~~~~~~L~~~~~~Lk- 277 (348)
T 3lst_A 210 QGVLLDRA-EVVARHRLDAPDVAGRWKVVEGDF-------L-REVP--HADVHVLKRILHNWGDEDSVRILTNCRRVMP- 277 (348)
T ss_dssp EEEEEECH-HHHTTCCCCCGGGTTSEEEEECCT-------T-TCCC--CCSEEEEESCGGGSCHHHHHHHHHHHHHTCC-
T ss_pred EEEEecCH-HHhhcccccccCCCCCeEEEecCC-------C-CCCC--CCcEEEEehhccCCCHHHHHHHHHHHHHhcC-
Confidence 78999994 55553221 14688998877 3 2344 79999999999866 55 599999999999
Q ss_pred CCeEEEEEeCCCC
Q 035840 79 PNGVIAAWTYTMP 91 (213)
Q Consensus 79 pgG~l~~~~~~~~ 91 (213)
|||+|++.....+
T Consensus 278 pgG~l~i~e~~~~ 290 (348)
T 3lst_A 278 AHGRVLVIDAVVP 290 (348)
T ss_dssp TTCEEEEEECCBC
T ss_pred CCCEEEEEEeccC
Confidence 9999998876533
No 199
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=98.33 E-value=1e-07 Score=76.04 Aligned_cols=74 Identities=20% Similarity=0.261 Sum_probs=57.8
Q ss_pred CCeEEEEeCCHHHHHHhhcC-------CCceEEecCCCCcchhhccC-CC-----CCCceeeeeechhhccCChhHHHHH
Q 035840 5 YKNVIATDTSPKQLEFAIKL-------PNIRYQLTPPTMSITELEQN-VA-----TQSSVDLVTIAAALHWFDLPQFYKQ 71 (213)
Q Consensus 5 ~~~V~gvD~S~~ml~~Ar~~-------~~v~~~~~~~~~~~~d~~~~-~~-----~~~sfDlV~~~~~~hw~d~~~~~~e 71 (213)
.++|+|+|+|+.|++.|++. +++++..+++ .+. +. .+++||+|++... .-+....+++
T Consensus 85 ~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda-------~~~l~~~~~~~~~~~fD~V~~d~~--~~~~~~~l~~ 155 (242)
T 3r3h_A 85 DGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPA-------LDTLHSLLNEGGEHQFDFIFIDAD--KTNYLNYYEL 155 (242)
T ss_dssp TCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCH-------HHHHHHHHHHHCSSCEEEEEEESC--GGGHHHHHHH
T ss_pred CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCH-------HHHHHHHhhccCCCCEeEEEEcCC--hHHhHHHHHH
Confidence 56999999999999999872 4789999887 332 11 1578999997643 2267788999
Q ss_pred HHHHhcCCCeEEEEEeC
Q 035840 72 VKWVLKKPNGVIAAWTY 88 (213)
Q Consensus 72 ~~rvLk~pgG~l~~~~~ 88 (213)
+.++|| |||.|++-+.
T Consensus 156 ~~~~Lk-pGG~lv~d~~ 171 (242)
T 3r3h_A 156 ALKLVT-PKGLIAIDNI 171 (242)
T ss_dssp HHHHEE-EEEEEEEECS
T ss_pred HHHhcC-CCeEEEEECC
Confidence 999999 9999987544
No 200
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=98.33 E-value=2.2e-07 Score=77.60 Aligned_cols=82 Identities=20% Similarity=0.205 Sum_probs=59.9
Q ss_pred cccCCeEEEEeCCHHHHHHhhcC------C--CceEEecCCCCcchhhccCCC----CCCceeeeeec---h-------h
Q 035840 2 AKIYKNVIATDTSPKQLEFAIKL------P--NIRYQLTPPTMSITELEQNVA----TQSSVDLVTIA---A-------A 59 (213)
Q Consensus 2 a~~~~~V~gvD~S~~ml~~Ar~~------~--~v~~~~~~~~~~~~d~~~~~~----~~~sfDlV~~~---~-------~ 59 (213)
|...++|+|+|+|+.|++.|++. . ++++.++++ .++.. .+++||+|++. + .
T Consensus 172 a~~ga~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~-------~~~l~~~~~~~~~fD~Ii~dPP~~~~~~~~~~ 244 (332)
T 2igt_A 172 AAAGAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDA-------MKFIQREERRGSTYDIILTDPPKFGRGTHGEV 244 (332)
T ss_dssp HHTTCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCH-------HHHHHHHHHHTCCBSEEEECCCSEEECTTCCE
T ss_pred HHcCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcH-------HHHHHHHHhcCCCceEEEECCccccCCchHHH
Confidence 34556999999999999999972 2 378888877 33211 15689999982 1 2
Q ss_pred hccC-ChhHHHHHHHHHhcCCCeEEEEEeCCCC
Q 035840 60 LHWF-DLPQFYKQVKWVLKKPNGVIAAWTYTMP 91 (213)
Q Consensus 60 ~hw~-d~~~~~~e~~rvLk~pgG~l~~~~~~~~ 91 (213)
+++. +...++.++.++|| |||.|++.+....
T Consensus 245 ~~~~~~~~~ll~~~~~~Lk-pgG~lli~~~~~~ 276 (332)
T 2igt_A 245 WQLFDHLPLMLDICREILS-PKALGLVLTAYSI 276 (332)
T ss_dssp EEHHHHHHHHHHHHHHTBC-TTCCEEEEEECCT
T ss_pred HHHHHHHHHHHHHHHHhcC-cCcEEEEEECCCC
Confidence 3455 67899999999999 9999776554433
No 201
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=98.33 E-value=1.4e-06 Score=72.97 Aligned_cols=73 Identities=11% Similarity=0.078 Sum_probs=59.5
Q ss_pred CeEEEEeCCHHHHHHhhcC-------CCceEEecCCCCcchhhccCCCCCCceeeeeechhhccC-Ch--hHHHHHHHHH
Q 035840 6 KNVIATDTSPKQLEFAIKL-------PNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWF-DL--PQFYKQVKWV 75 (213)
Q Consensus 6 ~~V~gvD~S~~ml~~Ar~~-------~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~-d~--~~~~~e~~rv 75 (213)
.+++++|+ +.|++.|++. +++++..+++ .+ +++. .||+|++..++|.+ |. .++++++.++
T Consensus 208 ~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~-------~~-~~~~-~~D~v~~~~vl~~~~~~~~~~~l~~~~~~ 277 (360)
T 1tw3_A 208 VSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDF-------FE-PLPR-KADAIILSFVLLNWPDHDAVRILTRCAEA 277 (360)
T ss_dssp CEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCT-------TS-CCSS-CEEEEEEESCGGGSCHHHHHHHHHHHHHT
T ss_pred CEEEEecC-HHHHHHHHHHHHhcCCCCceEEEeCCC-------CC-CCCC-CccEEEEcccccCCCHHHHHHHHHHHHHh
Confidence 48999999 9999999872 3688988877 33 3444 39999999999866 44 4899999999
Q ss_pred hcCCCeEEEEEeCC
Q 035840 76 LKKPNGVIAAWTYT 89 (213)
Q Consensus 76 Lk~pgG~l~~~~~~ 89 (213)
|| |||.|++....
T Consensus 278 L~-pgG~l~i~e~~ 290 (360)
T 1tw3_A 278 LE-PGGRILIHERD 290 (360)
T ss_dssp EE-EEEEEEEEECC
T ss_pred cC-CCcEEEEEEEe
Confidence 99 99999887765
No 202
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=98.32 E-value=7.7e-07 Score=71.84 Aligned_cols=68 Identities=16% Similarity=0.111 Sum_probs=55.2
Q ss_pred CCeEEEEeCCHHHHHHhhcC----------CCceEEecCCCCcchhhccCCCCCCceeeeeechhhccCChhHHHHHHHH
Q 035840 5 YKNVIATDTSPKQLEFAIKL----------PNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWFDLPQFYKQVKW 74 (213)
Q Consensus 5 ~~~V~gvD~S~~ml~~Ar~~----------~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~d~~~~~~e~~r 74 (213)
..+|+++|+|+.|++.|+++ +++++..+++ .+.. ++||+|++.. .|+..+++++.+
T Consensus 94 ~~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~-------~~~~---~~fD~Ii~d~----~dp~~~~~~~~~ 159 (262)
T 2cmg_A 94 DTHIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLL-------DLDI---KKYDLIFCLQ----EPDIHRIDGLKR 159 (262)
T ss_dssp SCEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGG-------GSCC---CCEEEEEESS----CCCHHHHHHHHT
T ss_pred CCEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechH-------HHHH---hhCCEEEECC----CChHHHHHHHHH
Confidence 37999999999999999973 3567777776 5543 7899999862 377779999999
Q ss_pred HhcCCCeEEEEEe
Q 035840 75 VLKKPNGVIAAWT 87 (213)
Q Consensus 75 vLk~pgG~l~~~~ 87 (213)
+|| |||.+++..
T Consensus 160 ~L~-pgG~lv~~~ 171 (262)
T 2cmg_A 160 MLK-EDGVFISVA 171 (262)
T ss_dssp TEE-EEEEEEEEE
T ss_pred hcC-CCcEEEEEc
Confidence 999 999998753
No 203
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=98.31 E-value=3.1e-07 Score=71.70 Aligned_cols=79 Identities=18% Similarity=0.181 Sum_probs=56.9
Q ss_pred CCeEEEEeCCHHHHHHhhcC-------CCceEEecCCCCcchhhccCCC-CCCceeeeeechhhccCChhHHHHHHHHHh
Q 035840 5 YKNVIATDTSPKQLEFAIKL-------PNIRYQLTPPTMSITELEQNVA-TQSSVDLVTIAAALHWFDLPQFYKQVKWVL 76 (213)
Q Consensus 5 ~~~V~gvD~S~~ml~~Ar~~-------~~v~~~~~~~~~~~~d~~~~~~-~~~sfDlV~~~~~~hw~d~~~~~~e~~rvL 76 (213)
.++|+|+|+|+.|++.|++. .++++..+++... +..++. ..++||+|++..... +....+.++.++|
T Consensus 83 ~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~~~~~~~~~~~fD~v~~d~~~~--~~~~~l~~~~~~L 157 (223)
T 3duw_A 83 GGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDS---LQQIENEKYEPFDFIFIDADKQ--NNPAYFEWALKLS 157 (223)
T ss_dssp SCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHH---HHHHHHTTCCCCSEEEECSCGG--GHHHHHHHHHHTC
T ss_pred CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHH---HHHHHhcCCCCcCEEEEcCCcH--HHHHHHHHHHHhc
Confidence 57999999999999999862 2488888887210 111111 126799999765422 5678999999999
Q ss_pred cCCCeEEEEEeCC
Q 035840 77 KKPNGVIAAWTYT 89 (213)
Q Consensus 77 k~pgG~l~~~~~~ 89 (213)
| |||.+++-+..
T Consensus 158 ~-pgG~lv~~~~~ 169 (223)
T 3duw_A 158 R-PGTVIIGDNVV 169 (223)
T ss_dssp C-TTCEEEEESCS
T ss_pred C-CCcEEEEeCCC
Confidence 9 99988765443
No 204
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=98.30 E-value=1.8e-07 Score=74.75 Aligned_cols=74 Identities=18% Similarity=0.220 Sum_probs=57.2
Q ss_pred CCeEEEEeCCHHHHHHhhcC-------CCceEEecCCCCcchhhccCC-C-----CCCceeeeeechhhccCChhHHHHH
Q 035840 5 YKNVIATDTSPKQLEFAIKL-------PNIRYQLTPPTMSITELEQNV-A-----TQSSVDLVTIAAALHWFDLPQFYKQ 71 (213)
Q Consensus 5 ~~~V~gvD~S~~ml~~Ar~~-------~~v~~~~~~~~~~~~d~~~~~-~-----~~~sfDlV~~~~~~hw~d~~~~~~e 71 (213)
.++|+|+|+|+.|++.|++. +++++..+++. +.++ + ++++||+|++... .-+....+++
T Consensus 104 ~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~------~~l~~l~~~~~~~~~fD~V~~d~~--~~~~~~~l~~ 175 (247)
T 1sui_A 104 DGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPAL------PVLDEMIKDEKNHGSYDFIFVDAD--KDNYLNYHKR 175 (247)
T ss_dssp TCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHH------HHHHHHHHSGGGTTCBSEEEECSC--STTHHHHHHH
T ss_pred CCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHH------HHHHHHHhccCCCCCEEEEEEcCc--hHHHHHHHHH
Confidence 57999999999999999972 35788888872 1112 1 2578999997633 1277899999
Q ss_pred HHHHhcCCCeEEEEEe
Q 035840 72 VKWVLKKPNGVIAAWT 87 (213)
Q Consensus 72 ~~rvLk~pgG~l~~~~ 87 (213)
+.++|| |||.|++-+
T Consensus 176 ~~~~Lk-pGG~lv~d~ 190 (247)
T 1sui_A 176 LIDLVK-VGGVIGYDN 190 (247)
T ss_dssp HHHHBC-TTCCEEEEC
T ss_pred HHHhCC-CCeEEEEec
Confidence 999999 999997654
No 205
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=98.30 E-value=5.6e-07 Score=74.77 Aligned_cols=76 Identities=14% Similarity=0.175 Sum_probs=56.9
Q ss_pred CCeEEEEeCCHHHHHHhhcC----------CCceEEecCCCCcchhhcc-CCCCCCceeeeeechhhccC---C--hhHH
Q 035840 5 YKNVIATDTSPKQLEFAIKL----------PNIRYQLTPPTMSITELEQ-NVATQSSVDLVTIAAALHWF---D--LPQF 68 (213)
Q Consensus 5 ~~~V~gvD~S~~ml~~Ar~~----------~~v~~~~~~~~~~~~d~~~-~~~~~~sfDlV~~~~~~hw~---d--~~~~ 68 (213)
..+|+|+|+|+.|++.|++. +++++..+|+ .+ ++..+++||+|++...-++- + ...+
T Consensus 140 ~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~-------~~~l~~~~~~fDvIi~d~~~p~~~~~~l~~~~~ 212 (321)
T 2pt6_A 140 VENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDA-------SKFLENVTNTYDVIIVDSSDPIGPAETLFNQNF 212 (321)
T ss_dssp CCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCH-------HHHHHHCCSCEEEEEEECCCSSSGGGGGSSHHH
T ss_pred CCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccH-------HHHHhhcCCCceEEEECCcCCCCcchhhhHHHH
Confidence 46999999999999999872 3577888776 32 22236789999986533331 1 1688
Q ss_pred HHHHHHHhcCCCeEEEEEeC
Q 035840 69 YKQVKWVLKKPNGVIAAWTY 88 (213)
Q Consensus 69 ~~e~~rvLk~pgG~l~~~~~ 88 (213)
++++.++|| |||.+++...
T Consensus 213 l~~~~~~Lk-pgG~lv~~~~ 231 (321)
T 2pt6_A 213 YEKIYNALK-PNGYCVAQCE 231 (321)
T ss_dssp HHHHHHHEE-EEEEEEEEEC
T ss_pred HHHHHHhcC-CCcEEEEEcC
Confidence 999999999 9999987643
No 206
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=98.30 E-value=4.6e-07 Score=73.91 Aligned_cols=76 Identities=14% Similarity=0.181 Sum_probs=57.7
Q ss_pred CCeEEEEeCCHHHHHHhhcC----------CCceEEecCCCCcchhhcc-CCCCCCceeeeeechhhccC-C-h---hHH
Q 035840 5 YKNVIATDTSPKQLEFAIKL----------PNIRYQLTPPTMSITELEQ-NVATQSSVDLVTIAAALHWF-D-L---PQF 68 (213)
Q Consensus 5 ~~~V~gvD~S~~ml~~Ar~~----------~~v~~~~~~~~~~~~d~~~-~~~~~~sfDlV~~~~~~hw~-d-~---~~~ 68 (213)
..+|+++|+|+.|++.|++. +++++..+++ .+ ++..+++||+|++....++. . . ..+
T Consensus 102 ~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~-------~~~l~~~~~~fD~Ii~d~~~~~~~~~~l~~~~~ 174 (283)
T 2i7c_A 102 VENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDA-------SKFLENVTNTYDVIIVDSSDPIGPAETLFNQNF 174 (283)
T ss_dssp CCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCH-------HHHHHHCCSCEEEEEEECCCTTTGGGGGSSHHH
T ss_pred CCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECCh-------HHHHHhCCCCceEEEEcCCCCCCcchhhhHHHH
Confidence 46999999999999999972 4577888877 32 22236789999986554443 1 1 589
Q ss_pred HHHHHHHhcCCCeEEEEEeC
Q 035840 69 YKQVKWVLKKPNGVIAAWTY 88 (213)
Q Consensus 69 ~~e~~rvLk~pgG~l~~~~~ 88 (213)
++++.++|| |||.+++...
T Consensus 175 l~~~~~~L~-pgG~lv~~~~ 193 (283)
T 2i7c_A 175 YEKIYNALK-PNGYCVAQCE 193 (283)
T ss_dssp HHHHHHHEE-EEEEEEEECC
T ss_pred HHHHHHhcC-CCcEEEEECC
Confidence 999999999 9999987643
No 207
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=98.29 E-value=6.5e-07 Score=77.18 Aligned_cols=76 Identities=14% Similarity=0.145 Sum_probs=56.6
Q ss_pred CeEEEEeCCHHHHHHh-------hc--------CCCceEEecCCCCcchhhccCCC--CCCceeeeeechhhccCChhHH
Q 035840 6 KNVIATDTSPKQLEFA-------IK--------LPNIRYQLTPPTMSITELEQNVA--TQSSVDLVTIAAALHWFDLPQF 68 (213)
Q Consensus 6 ~~V~gvD~S~~ml~~A-------r~--------~~~v~~~~~~~~~~~~d~~~~~~--~~~sfDlV~~~~~~hw~d~~~~ 68 (213)
.+|+|+|+|+.|++.| ++ ..++++..+++.. ..+++ .+++||+|+++..++.-+...+
T Consensus 267 ~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~gD~~~-----~~~~~~~~~~~FDvIvvn~~l~~~d~~~~ 341 (433)
T 1u2z_A 267 ALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKSFV-----DNNRVAELIPQCDVILVNNFLFDEDLNKK 341 (433)
T ss_dssp SEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSCST-----TCHHHHHHGGGCSEEEECCTTCCHHHHHH
T ss_pred CEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEcCccc-----cccccccccCCCCEEEEeCccccccHHHH
Confidence 5899999999999888 54 2477888765410 11112 2468999998766643488899
Q ss_pred HHHHHHHhcCCCeEEEEEe
Q 035840 69 YKQVKWVLKKPNGVIAAWT 87 (213)
Q Consensus 69 ~~e~~rvLk~pgG~l~~~~ 87 (213)
+.++.|+|| |||.|++..
T Consensus 342 L~el~r~LK-pGG~lVi~d 359 (433)
T 1u2z_A 342 VEKILQTAK-VGCKIISLK 359 (433)
T ss_dssp HHHHHTTCC-TTCEEEESS
T ss_pred HHHHHHhCC-CCeEEEEee
Confidence 999999999 999998763
No 208
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=98.26 E-value=4.7e-07 Score=75.01 Aligned_cols=75 Identities=12% Similarity=0.168 Sum_probs=53.5
Q ss_pred CCeEEEEeCCHHHHHHhhcC----------CCceEEecCCCCcchhhcc-CCCCCCceeeeeechhhccC-Ch----hHH
Q 035840 5 YKNVIATDTSPKQLEFAIKL----------PNIRYQLTPPTMSITELEQ-NVATQSSVDLVTIAAALHWF-DL----PQF 68 (213)
Q Consensus 5 ~~~V~gvD~S~~ml~~Ar~~----------~~v~~~~~~~~~~~~d~~~-~~~~~~sfDlV~~~~~~hw~-d~----~~~ 68 (213)
..+|+++|+|+.|++.|+++ +++++..+++ .+ ++..+++||+|++...-++- +. ..+
T Consensus 132 ~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~-------~~~l~~~~~~fD~Ii~d~~~~~~~~~~l~t~~~ 204 (314)
T 2b2c_A 132 VEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDG-------FEFLKNHKNEFDVIITDSSDPVGPAESLFGQSY 204 (314)
T ss_dssp CCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCH-------HHHHHHCTTCEEEEEECCC-------------H
T ss_pred CCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChH-------HHHHHhcCCCceEEEEcCCCCCCcchhhhHHHH
Confidence 47999999999999999972 3467777776 32 22356789999986544433 11 688
Q ss_pred HHHHHHHhcCCCeEEEEEe
Q 035840 69 YKQVKWVLKKPNGVIAAWT 87 (213)
Q Consensus 69 ~~e~~rvLk~pgG~l~~~~ 87 (213)
++++.++|| |||.+++..
T Consensus 205 l~~~~~~Lk-pgG~lv~~~ 222 (314)
T 2b2c_A 205 YELLRDALK-EDGILSSQG 222 (314)
T ss_dssp HHHHHHHEE-EEEEEEEEC
T ss_pred HHHHHhhcC-CCeEEEEEC
Confidence 999999999 999998754
No 209
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=98.26 E-value=5.3e-07 Score=71.48 Aligned_cols=80 Identities=14% Similarity=0.184 Sum_probs=57.1
Q ss_pred CCeEEEEeCCHHHHHHhhcC-------CCceEEecCCCCcchhhccCCCCCCceeeeeechhhccC-ChhHHHHHHHHHh
Q 035840 5 YKNVIATDTSPKQLEFAIKL-------PNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWF-DLPQFYKQVKWVL 76 (213)
Q Consensus 5 ~~~V~gvD~S~~ml~~Ar~~-------~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~-d~~~~~~e~~rvL 76 (213)
.++|+++|+|+.|++.|++. +++++..+++......+..-..++++||+|++. ++. +....++++.++|
T Consensus 95 ~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~fD~I~~d---~~~~~~~~~l~~~~~~L 171 (237)
T 3c3y_A 95 DGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQGQESEGSYDFGFVD---ADKPNYIKYHERLMKLV 171 (237)
T ss_dssp TCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSTTCTTCEEEEEEC---SCGGGHHHHHHHHHHHE
T ss_pred CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhccCCCCCcCEEEEC---CchHHHHHHHHHHHHhc
Confidence 57999999999999999972 257888888721000010001136789999975 234 6788999999999
Q ss_pred cCCCeEEEEEeC
Q 035840 77 KKPNGVIAAWTY 88 (213)
Q Consensus 77 k~pgG~l~~~~~ 88 (213)
| |||.+++-+.
T Consensus 172 ~-pGG~lv~d~~ 182 (237)
T 3c3y_A 172 K-VGGIVAYDNT 182 (237)
T ss_dssp E-EEEEEEEECT
T ss_pred C-CCeEEEEecC
Confidence 9 9999976543
No 210
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=98.22 E-value=2.8e-07 Score=76.03 Aligned_cols=74 Identities=15% Similarity=-0.021 Sum_probs=53.0
Q ss_pred CeEEEEeC----CHHHHHHhhc--C--CCceEEec-CCCCcchhhccCCCCCCceeeeeechhh---ccC-Chh---HHH
Q 035840 6 KNVIATDT----SPKQLEFAIK--L--PNIRYQLT-PPTMSITELEQNVATQSSVDLVTIAAAL---HWF-DLP---QFY 69 (213)
Q Consensus 6 ~~V~gvD~----S~~ml~~Ar~--~--~~v~~~~~-~~~~~~~d~~~~~~~~~sfDlV~~~~~~---hw~-d~~---~~~ 69 (213)
++|+|+|+ |+.|++.++. . +++.+.++ ++ ..+ ++.+||+|+|..++ ||. |.. .++
T Consensus 104 ~~V~gvD~~~~~~~~~~~~~~~~~~~~~~v~~~~~~D~-------~~l--~~~~fD~V~sd~~~~~g~~~~d~~~~l~~L 174 (305)
T 2p41_A 104 KNVREVKGLTKGGPGHEEPIPMSTYGWNLVRLQSGVDV-------FFI--PPERCDTLLCDIGESSPNPTVEAGRTLRVL 174 (305)
T ss_dssp TTEEEEEEECCCSTTSCCCCCCCSTTGGGEEEECSCCT-------TTS--CCCCCSEEEECCCCCCSSHHHHHHHHHHHH
T ss_pred CCEEEEeccccCchhHHHHHHhhhcCCCCeEEEecccc-------ccC--CcCCCCEEEECCccccCcchhhHHHHHHHH
Confidence 68999999 6766543322 2 46778777 55 544 45689999997765 444 554 589
Q ss_pred HHHHHHhcCCCeEEEEEeCC
Q 035840 70 KQVKWVLKKPNGVIAAWTYT 89 (213)
Q Consensus 70 ~e~~rvLk~pgG~l~~~~~~ 89 (213)
.++.|+|| |||.|++-.+.
T Consensus 175 ~~~~~~Lk-pGG~~v~kv~~ 193 (305)
T 2p41_A 175 NLVENWLS-NNTQFCVKVLN 193 (305)
T ss_dssp HHHHHHCC-TTCEEEEEESC
T ss_pred HHHHHHhC-CCCEEEEEeCC
Confidence 99999999 99998875443
No 211
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=98.21 E-value=6.2e-07 Score=70.90 Aligned_cols=81 Identities=23% Similarity=0.272 Sum_probs=57.2
Q ss_pred CCeEEEEeCCHHHHHHhhcC-------CCceEEecCCCCcchhhc--------cCCCCC--CceeeeeechhhccCChhH
Q 035840 5 YKNVIATDTSPKQLEFAIKL-------PNIRYQLTPPTMSITELE--------QNVATQ--SSVDLVTIAAALHWFDLPQ 67 (213)
Q Consensus 5 ~~~V~gvD~S~~ml~~Ar~~-------~~v~~~~~~~~~~~~d~~--------~~~~~~--~sfDlV~~~~~~hw~d~~~ 67 (213)
..+|+|+|+|+.|++.|++. .++++..+++......+. ...+++ ++||+|++.... -+...
T Consensus 85 ~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~f~~~~~~fD~I~~~~~~--~~~~~ 162 (239)
T 2hnk_A 85 DGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLIDSKSAPSWASDFAFGPSSIDLFFLDADK--ENYPN 162 (239)
T ss_dssp TCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCSSCCGGGTTTCCSTTCEEEEEECSCG--GGHHH
T ss_pred CCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhcccccccccccCCCCCcCEEEEeCCH--HHHHH
Confidence 57999999999999999973 237888887621000000 011333 789999987432 16678
Q ss_pred HHHHHHHHhcCCCeEEEEEeC
Q 035840 68 FYKQVKWVLKKPNGVIAAWTY 88 (213)
Q Consensus 68 ~~~e~~rvLk~pgG~l~~~~~ 88 (213)
.++++.++|| |||.+++.+.
T Consensus 163 ~l~~~~~~L~-pgG~lv~~~~ 182 (239)
T 2hnk_A 163 YYPLILKLLK-PGGLLIADNV 182 (239)
T ss_dssp HHHHHHHHEE-EEEEEEEECS
T ss_pred HHHHHHHHcC-CCeEEEEEcc
Confidence 9999999999 9999987543
No 212
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=98.21 E-value=8.7e-07 Score=69.94 Aligned_cols=79 Identities=25% Similarity=0.336 Sum_probs=58.7
Q ss_pred CCeEEEEeCCHHHHHHhhcC-------CCceEEecCCCCcchhhccCCCCC--CceeeeeechhhccCChhHHHHHHHHH
Q 035840 5 YKNVIATDTSPKQLEFAIKL-------PNIRYQLTPPTMSITELEQNVATQ--SSVDLVTIAAALHWFDLPQFYKQVKWV 75 (213)
Q Consensus 5 ~~~V~gvD~S~~ml~~Ar~~-------~~v~~~~~~~~~~~~d~~~~~~~~--~sfDlV~~~~~~hw~d~~~~~~e~~rv 75 (213)
..+|+|+|+|+.|++.|++. +++++..+++.. .+..++.++ ++||+|++... .-+....+.++.++
T Consensus 97 ~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~---~l~~l~~~~~~~~fD~V~~d~~--~~~~~~~l~~~~~~ 171 (232)
T 3cbg_A 97 DGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALA---TLEQLTQGKPLPEFDLIFIDAD--KRNYPRYYEIGLNL 171 (232)
T ss_dssp TCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHH---HHHHHHTSSSCCCEEEEEECSC--GGGHHHHHHHHHHT
T ss_pred CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHH---HHHHHHhcCCCCCcCEEEECCC--HHHHHHHHHHHHHH
Confidence 45999999999999999973 357888887621 113333434 78999997643 12678899999999
Q ss_pred hcCCCeEEEEEeCC
Q 035840 76 LKKPNGVIAAWTYT 89 (213)
Q Consensus 76 Lk~pgG~l~~~~~~ 89 (213)
|| |||.|++-+..
T Consensus 172 Lk-pgG~lv~~~~~ 184 (232)
T 3cbg_A 172 LR-RGGLMVIDNVL 184 (232)
T ss_dssp EE-EEEEEEEECTT
T ss_pred cC-CCeEEEEeCCC
Confidence 99 99999875443
No 213
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=98.21 E-value=2e-06 Score=69.61 Aligned_cols=76 Identities=11% Similarity=-0.017 Sum_probs=56.7
Q ss_pred CeEEEEeCCHHHHHHhhcC------CCceEEecCCCCcchhhccCCC----CCCceeeeeec---hhhc-----------
Q 035840 6 KNVIATDTSPKQLEFAIKL------PNIRYQLTPPTMSITELEQNVA----TQSSVDLVTIA---AALH----------- 61 (213)
Q Consensus 6 ~~V~gvD~S~~ml~~Ar~~------~~v~~~~~~~~~~~~d~~~~~~----~~~sfDlV~~~---~~~h----------- 61 (213)
++|+|+|+|+.|++.+++. +++++..+++ .+++. .+++||+|++. .++.
T Consensus 109 ~~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~~D~-------~~~~~~~~~~~~~fD~Vl~d~Pcs~~g~~~~~p~~~~~ 181 (274)
T 3ajd_A 109 GTIVAVEISKTRTKALKSNINRMGVLNTIIINADM-------RKYKDYLLKNEIFFDKILLDAPCSGNIIKDKNRNVSEE 181 (274)
T ss_dssp SEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCH-------HHHHHHHHHTTCCEEEEEEEECCC------------HH
T ss_pred CEEEEECCCHHHHHHHHHHHHHhCCCcEEEEeCCh-------HhcchhhhhccccCCEEEEcCCCCCCcccccCCCCCHH
Confidence 7999999999999999872 4788888877 44433 36689999965 1211
Q ss_pred ----cC-ChhHHHHHHHHHhcCCCeEEEEEeCC
Q 035840 62 ----WF-DLPQFYKQVKWVLKKPNGVIAAWTYT 89 (213)
Q Consensus 62 ----w~-d~~~~~~e~~rvLk~pgG~l~~~~~~ 89 (213)
.. .....+.++.++|| |||.|++.+..
T Consensus 182 ~~~~~~~~~~~~l~~~~~~Lk-pgG~lv~stcs 213 (274)
T 3ajd_A 182 DIKYCSLRQKELIDIGIDLLK-KDGELVYSTCS 213 (274)
T ss_dssp HHTGGGTCHHHHHHHHHHHEE-EEEEEEEEESC
T ss_pred HHHHHHHHHHHHHHHHHHhCC-CCCEEEEEECC
Confidence 11 45788999999999 99999876543
No 214
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=98.19 E-value=6.1e-07 Score=70.21 Aligned_cols=78 Identities=19% Similarity=0.358 Sum_probs=57.4
Q ss_pred CCeEEEEeCCHHHHHHhhcC-------CCceEEecCCCCcchhhccCCCC--CCceeeeeechhhccCChhHHHHHHHHH
Q 035840 5 YKNVIATDTSPKQLEFAIKL-------PNIRYQLTPPTMSITELEQNVAT--QSSVDLVTIAAALHWFDLPQFYKQVKWV 75 (213)
Q Consensus 5 ~~~V~gvD~S~~ml~~Ar~~-------~~v~~~~~~~~~~~~d~~~~~~~--~~sfDlV~~~~~~hw~d~~~~~~e~~rv 75 (213)
..+|+|+|+|+.|++.|++. .++++..+++.. .+..++.. .++||+|++... .-+....++++.++
T Consensus 94 ~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~---~~~~~~~~~~~~~~D~v~~d~~--~~~~~~~l~~~~~~ 168 (229)
T 2avd_A 94 DGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALE---TLDELLAAGEAGTFDVAVVDAD--KENCSAYYERCLQL 168 (229)
T ss_dssp TCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHH---HHHHHHHTTCTTCEEEEEECSC--STTHHHHHHHHHHH
T ss_pred CCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHH---HHHHHHhcCCCCCccEEEECCC--HHHHHHHHHHHHHH
Confidence 56999999999999999972 468888887721 01111111 168999998543 22677899999999
Q ss_pred hcCCCeEEEEEeC
Q 035840 76 LKKPNGVIAAWTY 88 (213)
Q Consensus 76 Lk~pgG~l~~~~~ 88 (213)
|| |||.+++.+.
T Consensus 169 L~-pgG~lv~~~~ 180 (229)
T 2avd_A 169 LR-PGGILAVLRV 180 (229)
T ss_dssp EE-EEEEEEEECC
T ss_pred cC-CCeEEEEECC
Confidence 99 9999987553
No 215
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=98.19 E-value=1.3e-06 Score=67.16 Aligned_cols=77 Identities=13% Similarity=0.129 Sum_probs=54.0
Q ss_pred cccCCeEEEEeCCHHHHHHhhcCCCceEEecCCCCcchhhccCCC--------C---CCceeeeeechhhccC-----Ch
Q 035840 2 AKIYKNVIATDTSPKQLEFAIKLPNIRYQLTPPTMSITELEQNVA--------T---QSSVDLVTIAAALHWF-----DL 65 (213)
Q Consensus 2 a~~~~~V~gvD~S~~ml~~Ar~~~~v~~~~~~~~~~~~d~~~~~~--------~---~~sfDlV~~~~~~hw~-----d~ 65 (213)
|+..++|+|+|+|+.+ ..+++++.++|+ .+.+. + .++||+|++..+..+. |.
T Consensus 44 a~~~~~V~gvD~~~~~-----~~~~v~~~~~D~-------~~~~~~~~~~~~~~~~~~~~~D~Vlsd~~~~~~g~~~~d~ 111 (191)
T 3dou_A 44 NSLARKIISIDLQEME-----EIAGVRFIRCDI-------FKETIFDDIDRALREEGIEKVDDVVSDAMAKVSGIPSRDH 111 (191)
T ss_dssp TTTCSEEEEEESSCCC-----CCTTCEEEECCT-------TSSSHHHHHHHHHHHHTCSSEEEEEECCCCCCCSCHHHHH
T ss_pred HHcCCcEEEEeccccc-----cCCCeEEEEccc-------cCHHHHHHHHHHhhcccCCcceEEecCCCcCCCCCcccCH
Confidence 4456799999999852 346899999887 33321 1 1389999986543221 32
Q ss_pred -------hHHHHHHHHHhcCCCeEEEEEeCCCC
Q 035840 66 -------PQFYKQVKWVLKKPNGVIAAWTYTMP 91 (213)
Q Consensus 66 -------~~~~~e~~rvLk~pgG~l~~~~~~~~ 91 (213)
..++.++.++|| |||.|++-.+..+
T Consensus 112 ~~~~~l~~~~l~~a~~~Lk-pGG~lv~k~~~~~ 143 (191)
T 3dou_A 112 AVSYQIGQRVMEIAVRYLR-NGGNVLLKQFQGD 143 (191)
T ss_dssp HHHHHHHHHHHHHHHHHEE-EEEEEEEEEECST
T ss_pred HHHHHHHHHHHHHHHHHcc-CCCEEEEEEcCCC
Confidence 578899999999 9999986655433
No 216
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=98.18 E-value=6.3e-07 Score=78.38 Aligned_cols=70 Identities=21% Similarity=0.219 Sum_probs=55.9
Q ss_pred CeEEEEeCCHHHHHHhhcC-------CCceEEecCCCCcchhhccCCCCCCceeeeeechhhc-cC--ChhHHHHHHHHH
Q 035840 6 KNVIATDTSPKQLEFAIKL-------PNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALH-WF--DLPQFYKQVKWV 75 (213)
Q Consensus 6 ~~V~gvD~S~~ml~~Ar~~-------~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~h-w~--d~~~~~~e~~rv 75 (213)
.+|+|+|+|+ |++.|++. .++++..+++ ++++++ ++||+|++...++ |. +....+.++.++
T Consensus 182 ~~V~gvD~s~-~l~~A~~~~~~~gl~~~v~~~~~d~-------~~~~~~-~~fD~Ivs~~~~~~~~~e~~~~~l~~~~~~ 252 (480)
T 3b3j_A 182 RKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKV-------EEVSLP-EQVDIIISEPMGYMLFNERMLESYLHAKKY 252 (480)
T ss_dssp SEEEEEECHH-HHHHHHHHHHHTTCTTTEEEEESCT-------TTCCCS-SCEEEEECCCCHHHHTCHHHHHHHHHGGGG
T ss_pred CEEEEEEcHH-HHHHHHHHHHHcCCCCcEEEEECch-------hhCccC-CCeEEEEEeCchHhcCcHHHHHHHHHHHHh
Confidence 4999999999 99999862 5688999888 665554 5799999987654 54 346778889999
Q ss_pred hcCCCeEEEE
Q 035840 76 LKKPNGVIAA 85 (213)
Q Consensus 76 Lk~pgG~l~~ 85 (213)
|| |||.+++
T Consensus 253 Lk-pgG~li~ 261 (480)
T 3b3j_A 253 LK-PSGNMFP 261 (480)
T ss_dssp EE-EEEEEES
T ss_pred cC-CCCEEEE
Confidence 99 9999873
No 217
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=98.18 E-value=1.3e-06 Score=71.07 Aligned_cols=74 Identities=12% Similarity=0.117 Sum_probs=55.4
Q ss_pred CCeEEEEeCCHHHHHHhhcC----------------CCceEEecCCCCcchhhccC-CCCCCceeeeeechhhccCC---
Q 035840 5 YKNVIATDTSPKQLEFAIKL----------------PNIRYQLTPPTMSITELEQN-VATQSSVDLVTIAAALHWFD--- 64 (213)
Q Consensus 5 ~~~V~gvD~S~~ml~~Ar~~----------------~~v~~~~~~~~~~~~d~~~~-~~~~~sfDlV~~~~~~hw~d--- 64 (213)
..+|++||+|+.|++.|++. +++++..+++ .+. +. +++||+|++....++..
T Consensus 98 ~~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~~D~-------~~~l~~-~~~fD~Ii~d~~~~~~~~~~ 169 (281)
T 1mjf_A 98 VDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDG-------FEFIKN-NRGFDVIIADSTDPVGPAKV 169 (281)
T ss_dssp CSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCH-------HHHHHH-CCCEEEEEEECCCCC-----
T ss_pred CCEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEEECch-------HHHhcc-cCCeeEEEECCCCCCCcchh
Confidence 45999999999999999852 3567777776 221 22 67899999866544431
Q ss_pred --hhHHHHHHHHHhcCCCeEEEEEe
Q 035840 65 --LPQFYKQVKWVLKKPNGVIAAWT 87 (213)
Q Consensus 65 --~~~~~~e~~rvLk~pgG~l~~~~ 87 (213)
...+++++.++|| |||.+++..
T Consensus 170 l~~~~~l~~~~~~L~-pgG~lv~~~ 193 (281)
T 1mjf_A 170 LFSEEFYRYVYDALN-NPGIYVTQA 193 (281)
T ss_dssp TTSHHHHHHHHHHEE-EEEEEEEEE
T ss_pred hhHHHHHHHHHHhcC-CCcEEEEEc
Confidence 3678999999999 999998763
No 218
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=98.17 E-value=4.6e-07 Score=76.96 Aligned_cols=79 Identities=19% Similarity=0.208 Sum_probs=59.1
Q ss_pred ccCCeEEEEeCCHHHHHHhhcC------CCceEEecCCCCcchhhccCCC----CCCceeeeeec---------hhhccC
Q 035840 3 KIYKNVIATDTSPKQLEFAIKL------PNIRYQLTPPTMSITELEQNVA----TQSSVDLVTIA---------AALHWF 63 (213)
Q Consensus 3 ~~~~~V~gvD~S~~ml~~Ar~~------~~v~~~~~~~~~~~~d~~~~~~----~~~sfDlV~~~---------~~~hw~ 63 (213)
....+|+|+|+|+.|++.|++. .++++..+++ .++.. .+.+||+|++. ......
T Consensus 229 ~~~~~v~~vD~s~~~~~~a~~n~~~n~~~~~~~~~~d~-------~~~~~~~~~~~~~fD~Ii~dpP~~~~~~~~~~~~~ 301 (382)
T 1wxx_A 229 LGFREVVAVDSSAEALRRAEENARLNGLGNVRVLEANA-------FDLLRRLEKEGERFDLVVLDPPAFAKGKKDVERAY 301 (382)
T ss_dssp HHEEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCH-------HHHHHHHHHTTCCEEEEEECCCCSCCSTTSHHHHH
T ss_pred HhCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEECCH-------HHHHHHHHhcCCCeeEEEECCCCCCCChhHHHHHH
Confidence 3456899999999999999972 4588888887 33311 25789999973 122333
Q ss_pred -ChhHHHHHHHHHhcCCCeEEEEEeCC
Q 035840 64 -DLPQFYKQVKWVLKKPNGVIAAWTYT 89 (213)
Q Consensus 64 -d~~~~~~e~~rvLk~pgG~l~~~~~~ 89 (213)
+....+.++.++|+ |||.|++.+..
T Consensus 302 ~~~~~~l~~~~~~Lk-pgG~l~~~~~~ 327 (382)
T 1wxx_A 302 RAYKEVNLRAIKLLK-EGGILATASCS 327 (382)
T ss_dssp HHHHHHHHHHHHTEE-EEEEEEEEECC
T ss_pred HHHHHHHHHHHHhcC-CCCEEEEEECC
Confidence 55678899999999 99999877654
No 219
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=98.16 E-value=5.2e-07 Score=71.91 Aligned_cols=77 Identities=12% Similarity=0.034 Sum_probs=50.8
Q ss_pred CCeEEEEeCCHHHHHHhhcC------C-CceEEecCCCCcchhhccCCCC---CCceeeeeechhhccCC----------
Q 035840 5 YKNVIATDTSPKQLEFAIKL------P-NIRYQLTPPTMSITELEQNVAT---QSSVDLVTIAAALHWFD---------- 64 (213)
Q Consensus 5 ~~~V~gvD~S~~ml~~Ar~~------~-~v~~~~~~~~~~~~d~~~~~~~---~~sfDlV~~~~~~hw~d---------- 64 (213)
..+|+|+|+|+.|++.|++. . ++++..++++.. +.+ +++ +++||+|+++--+++..
T Consensus 89 ~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~~~-~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~ 164 (254)
T 2h00_A 89 GWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTL---LMD-ALKEESEIIYDFCMCNPPFFANQLEAKGVNSRN 164 (254)
T ss_dssp CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCS---STT-TSTTCCSCCBSEEEECCCCC-------------
T ss_pred CCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhhh---hhh-hhhcccCCcccEEEECCCCccCcchhccccccc
Confidence 36999999999999999972 2 388999887310 010 344 36899999985554332
Q ss_pred ------hhHHHHHHHHHhcCCCeEEEEE
Q 035840 65 ------LPQFYKQVKWVLKKPNGVIAAW 86 (213)
Q Consensus 65 ------~~~~~~e~~rvLk~pgG~l~~~ 86 (213)
....+.+++|+|| |||.+.+.
T Consensus 165 ~~~~~~~~~l~~~~~~~Lk-pgG~l~~~ 191 (254)
T 2h00_A 165 PRRPPPSSVNTGGITEIMA-EGGELEFV 191 (254)
T ss_dssp ------------CTTTTHH-HHTHHHHH
T ss_pred ccccCCHHHHhhhHHHHEe-cCCEEEEE
Confidence 2245688999999 99998654
No 220
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=98.12 E-value=4e-06 Score=68.13 Aligned_cols=78 Identities=18% Similarity=0.090 Sum_probs=55.2
Q ss_pred CeEEEEeC-CHHHHHHhhcCC----------------CceEEecCCCCcchhhccCC--CCCCceeeeeechhhccC-Ch
Q 035840 6 KNVIATDT-SPKQLEFAIKLP----------------NIRYQLTPPTMSITELEQNV--ATQSSVDLVTIAAALHWF-DL 65 (213)
Q Consensus 6 ~~V~gvD~-S~~ml~~Ar~~~----------------~v~~~~~~~~~~~~d~~~~~--~~~~sfDlV~~~~~~hw~-d~ 65 (213)
++|+|+|+ |+.|++.|++.. ++++...+.... .+.+. +++++||+|+++.++++. +.
T Consensus 103 ~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~---~~~~~~~~~~~~fD~Ii~~dvl~~~~~~ 179 (281)
T 3bzb_A 103 DQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDS---PDSLQRCTGLQRFQVVLLADLLSFHQAH 179 (281)
T ss_dssp SEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSC---THHHHHHHSCSSBSEEEEESCCSCGGGH
T ss_pred CEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCc---cHHHHhhccCCCCCEEEEeCcccChHHH
Confidence 38999999 899999998631 355553332100 12111 146789999999999877 89
Q ss_pred hHHHHHHHHHhcC--C--CeEEEEE
Q 035840 66 PQFYKQVKWVLKK--P--NGVIAAW 86 (213)
Q Consensus 66 ~~~~~e~~rvLk~--p--gG~l~~~ 86 (213)
..+++++.++||. | ||.+++.
T Consensus 180 ~~ll~~l~~~Lk~~~p~~gG~l~v~ 204 (281)
T 3bzb_A 180 DALLRSVKMLLALPANDPTAVALVT 204 (281)
T ss_dssp HHHHHHHHHHBCCTTTCTTCEEEEE
T ss_pred HHHHHHHHHHhcccCCCCCCEEEEE
Confidence 9999999999982 3 8987654
No 221
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=98.11 E-value=3.8e-06 Score=73.40 Aligned_cols=76 Identities=14% Similarity=0.180 Sum_probs=56.0
Q ss_pred CeEEEEeCCHHHHHHhhcC------CCceEEecCCCCcchhhccCCC-CCCceeeeee---chhhc-----------cC-
Q 035840 6 KNVIATDTSPKQLEFAIKL------PNIRYQLTPPTMSITELEQNVA-TQSSVDLVTI---AAALH-----------WF- 63 (213)
Q Consensus 6 ~~V~gvD~S~~ml~~Ar~~------~~v~~~~~~~~~~~~d~~~~~~-~~~sfDlV~~---~~~~h-----------w~- 63 (213)
++|+|+|+|+.|++.+++. +++.+..+++ .+++. .+++||.|++ +.+.. |-
T Consensus 143 g~V~avDis~~~l~~~~~n~~r~g~~nv~~~~~D~-------~~~~~~~~~~fD~Il~D~PcSg~G~~~~~pd~~~~~~~ 215 (479)
T 2frx_A 143 GAILANEFSASRVKVLHANISRCGISNVALTHFDG-------RVFGAAVPEMFDAILLDAPCSGEGVVRKDPDALKNWSP 215 (479)
T ss_dssp SEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCCS-------TTHHHHSTTCEEEEEEECCCCCGGGGGTCTTSSSSCCH
T ss_pred CEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCCH-------HHhhhhccccCCEEEECCCcCCcccccCCHHHHhhcCH
Confidence 6899999999999999872 5788888887 44332 4578999997 33221 21
Q ss_pred -C-------hhHHHHHHHHHhcCCCeEEEEEeCC
Q 035840 64 -D-------LPQFYKQVKWVLKKPNGVIAAWTYT 89 (213)
Q Consensus 64 -d-------~~~~~~e~~rvLk~pgG~l~~~~~~ 89 (213)
+ ....+.++.++|| |||.|++.+..
T Consensus 216 ~~~~~l~~~q~~iL~~a~~~Lk-pGG~LvysTcs 248 (479)
T 2frx_A 216 ESNQEIAATQRELIDSAFHALR-PGGTLVYSTCT 248 (479)
T ss_dssp HHHHHHHHHHHHHHHHHHHHEE-EEEEEEEEESC
T ss_pred hHHHHHHHHHHHHHHHHHHhcC-CCCEEEEeccc
Confidence 0 2367899999999 99999866543
No 222
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=98.11 E-value=9.4e-07 Score=75.32 Aligned_cols=77 Identities=14% Similarity=0.202 Sum_probs=58.4
Q ss_pred CCeEEEEeCCHHHHHHhhcC------C-CceEEecCCCCcchhhccCC----CCCCceeeeeec---------hhhccC-
Q 035840 5 YKNVIATDTSPKQLEFAIKL------P-NIRYQLTPPTMSITELEQNV----ATQSSVDLVTIA---------AALHWF- 63 (213)
Q Consensus 5 ~~~V~gvD~S~~ml~~Ar~~------~-~v~~~~~~~~~~~~d~~~~~----~~~~sfDlV~~~---------~~~hw~- 63 (213)
.++|+|+|+|+.|++.|++. . ++++..+++ .+.. -.+++||+|++. ..+++.
T Consensus 240 ~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~-------~~~~~~~~~~~~~fD~Vi~dpP~~~~~~~~~~~~~~ 312 (396)
T 2as0_A 240 ADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSA-------FEEMEKLQKKGEKFDIVVLDPPAFVQHEKDLKAGLR 312 (396)
T ss_dssp CSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCH-------HHHHHHHHHTTCCEEEEEECCCCSCSSGGGHHHHHH
T ss_pred CCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCH-------HHHHHHHHhhCCCCCEEEECCCCCCCCHHHHHHHHH
Confidence 45999999999999999972 2 688888887 3321 135689999973 223344
Q ss_pred ChhHHHHHHHHHhcCCCeEEEEEeCC
Q 035840 64 DLPQFYKQVKWVLKKPNGVIAAWTYT 89 (213)
Q Consensus 64 d~~~~~~e~~rvLk~pgG~l~~~~~~ 89 (213)
+....+.++.++|+ |||.+++.+..
T Consensus 313 ~~~~~l~~~~~~Lk-pgG~lv~~~~~ 337 (396)
T 2as0_A 313 AYFNVNFAGLNLVK-DGGILVTCSCS 337 (396)
T ss_dssp HHHHHHHHHHTTEE-EEEEEEEEECC
T ss_pred HHHHHHHHHHHhcC-CCcEEEEEECC
Confidence 67788999999999 99998876654
No 223
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=98.08 E-value=2.7e-06 Score=69.40 Aligned_cols=72 Identities=13% Similarity=0.126 Sum_probs=53.7
Q ss_pred cccCCeEEEEeCCHHHHHHhhcC-------CCceEEecCCCCcchhhccCCCCCCceeeeeechhhccCCh-h-HHH---
Q 035840 2 AKIYKNVIATDTSPKQLEFAIKL-------PNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWFDL-P-QFY--- 69 (213)
Q Consensus 2 a~~~~~V~gvD~S~~ml~~Ar~~-------~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~d~-~-~~~--- 69 (213)
+....+|+|+|+|+.|++.|++. +++++..+++ .+.+++ +||+|+++..++|..+ . ..+
T Consensus 47 ~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~-------~~~~~~--~fD~vv~nlpy~~~~~~~~~~l~~~ 117 (285)
T 1zq9_A 47 LEKAKKVVACELDPRLVAELHKRVQGTPVASKLQVLVGDV-------LKTDLP--FFDTCVANLPYQISSPFVFKLLLHR 117 (285)
T ss_dssp HHHSSEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCT-------TTSCCC--CCSEEEEECCGGGHHHHHHHHHHCS
T ss_pred HhhCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcce-------ecccch--hhcEEEEecCcccchHHHHHHHhcC
Confidence 45578999999999999999872 3678888887 655554 6999999888777622 1 222
Q ss_pred -----------HHH--HHHhcCCCeEE
Q 035840 70 -----------KQV--KWVLKKPNGVI 83 (213)
Q Consensus 70 -----------~e~--~rvLk~pgG~l 83 (213)
+|+ .++|| |||.+
T Consensus 118 ~~~~~~~~m~qkEva~r~vlk-PGg~~ 143 (285)
T 1zq9_A 118 PFFRCAILMFQREFALRLVAK-PGDKL 143 (285)
T ss_dssp SCCSEEEEEEEHHHHHHHHCC-TTCTT
T ss_pred cchhhhhhhhhHHHHHHHhcC-CCCcc
Confidence 344 37999 99986
No 224
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=98.08 E-value=1.2e-06 Score=74.61 Aligned_cols=81 Identities=15% Similarity=0.127 Sum_probs=55.8
Q ss_pred CCeEEEEeCCHHHHHHhhcC------C--CceEEecCCCCcchhhccCCCCCCceeeeeec---------hhhccC-Chh
Q 035840 5 YKNVIATDTSPKQLEFAIKL------P--NIRYQLTPPTMSITELEQNVATQSSVDLVTIA---------AALHWF-DLP 66 (213)
Q Consensus 5 ~~~V~gvD~S~~ml~~Ar~~------~--~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~---------~~~hw~-d~~ 66 (213)
.++|+|+|+|+.|++.|++. . +++|.++++... +..+.-.+.+||+|++. ...... +..
T Consensus 235 a~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~---l~~~~~~~~~fD~Ii~DPP~~~~~~~~~~~~~~~~~ 311 (385)
T 2b78_A 235 AMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDY---FKYARRHHLTYDIIIIDPPSFARNKKEVFSVSKDYH 311 (385)
T ss_dssp BSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHH---HHHHHHTTCCEEEEEECCCCC-----CCCCHHHHHH
T ss_pred CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHH---HHHHHHhCCCccEEEECCCCCCCChhhHHHHHHHHH
Confidence 45899999999999999972 3 788999887210 11111124579999972 111222 445
Q ss_pred HHHHHHHHHhcCCCeEEEEEeCC
Q 035840 67 QFYKQVKWVLKKPNGVIAAWTYT 89 (213)
Q Consensus 67 ~~~~e~~rvLk~pgG~l~~~~~~ 89 (213)
..+.++.++|+ |||.|++.+..
T Consensus 312 ~ll~~~~~~L~-pgG~l~~~~~~ 333 (385)
T 2b78_A 312 KLIRQGLEILS-ENGLIIASTNA 333 (385)
T ss_dssp HHHHHHHHTEE-EEEEEEEEECC
T ss_pred HHHHHHHHhcC-CCcEEEEEeCC
Confidence 56778899999 99999877654
No 225
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=98.07 E-value=1.1e-05 Score=69.95 Aligned_cols=76 Identities=12% Similarity=0.163 Sum_probs=56.7
Q ss_pred CeEEEEeCCHHHHHHhhcC------CCceEEecCCCCcchhhccCC--CCCCceeeeee---chhhccC----Ch-----
Q 035840 6 KNVIATDTSPKQLEFAIKL------PNIRYQLTPPTMSITELEQNV--ATQSSVDLVTI---AAALHWF----DL----- 65 (213)
Q Consensus 6 ~~V~gvD~S~~ml~~Ar~~------~~v~~~~~~~~~~~~d~~~~~--~~~~sfDlV~~---~~~~hw~----d~----- 65 (213)
++|+|+|+|+.|++.+++. +++.+..+++ .+.+ +++++||+|++ +.+...+ |.
T Consensus 285 ~~v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~~D~-------~~~~~~~~~~~fD~Vl~D~Pcsg~g~~~~~pd~~~~~~ 357 (450)
T 2yxl_A 285 GKIYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKDA-------RKAPEIIGEEVADKVLLDAPCTSSGTIGKNPELRWRLR 357 (450)
T ss_dssp SEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCT-------TCCSSSSCSSCEEEEEEECCCCCGGGTTTSTTHHHHCC
T ss_pred CEEEEEcCCHHHHHHHHHHHHHcCCCcEEEEEcCh-------hhcchhhccCCCCEEEEcCCCCCCeeeccChhhhhhCC
Confidence 6899999999999998862 4788888877 5544 55578999996 2222111 11
Q ss_pred -----------hHHHHHHHHHhcCCCeEEEEEeCC
Q 035840 66 -----------PQFYKQVKWVLKKPNGVIAAWTYT 89 (213)
Q Consensus 66 -----------~~~~~e~~rvLk~pgG~l~~~~~~ 89 (213)
...+.++.++|| |||.|++.+..
T Consensus 358 ~~~~~~l~~~q~~iL~~a~~~Lk-pGG~lvy~tcs 391 (450)
T 2yxl_A 358 EDKINEMSQLQRELLESAARLVK-PGGRLLYTTCS 391 (450)
T ss_dssp TTSHHHHHHHHHHHHHHHHTTEE-EEEEEEEEESC
T ss_pred HHHHHHHHHHHHHHHHHHHHhcC-CCcEEEEEeCC
Confidence 568999999999 99999876544
No 226
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=98.06 E-value=6.8e-06 Score=69.68 Aligned_cols=81 Identities=14% Similarity=0.115 Sum_probs=59.4
Q ss_pred eEEEEeCC-----------HHHHHHhhcC----CCceEEecCCCCcchhhccCCCCCCceeeeeechhhccC-ChhHH--
Q 035840 7 NVIATDTS-----------PKQLEFAIKL----PNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWF-DLPQF-- 68 (213)
Q Consensus 7 ~V~gvD~S-----------~~ml~~Ar~~----~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~-d~~~~-- 68 (213)
+|+..|+. |.+.+.+++. .+..|..+.. ++|..-.|+++|+|+|+++.|+||+ +.+..
T Consensus 95 ~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~g~~~~~~f~~gvp----gSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~ 170 (384)
T 2efj_A 95 QIFLNDLFQNDFNSVFKLLPSFYRNLEKENGRKIGSCLIGAMP----GSFYSRLFPEESMHFLHSCYCLHWLSQVPSGLV 170 (384)
T ss_dssp EEEEECCTTSCHHHHHHHHHHHHHHHHHHTCCCTTSEEEEECC----SCTTSCCSCTTCEEEEEEESCTTBCSSSCCC--
T ss_pred EEEecCCCccchHHHHhhhhhhHhhhhhhccCCCCceEEEecc----hhhhhccCCCCceEEEEecceeeecCCCchhhh
Confidence 57788887 6766655431 2346777766 5677778999999999999999999 65533
Q ss_pred -------------------------------------HHHHHHHhcCCCeEEEEEeCCCCC
Q 035840 69 -------------------------------------YKQVKWVLKKPNGVIAAWTYTMPE 92 (213)
Q Consensus 69 -------------------------------------~~e~~rvLk~pgG~l~~~~~~~~~ 92 (213)
|+..+|.|+ |||++++...+.+.
T Consensus 171 ~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~FL~~Ra~eL~-pGG~mvl~~~gr~~ 230 (384)
T 2efj_A 171 TELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTFLRIHSEELI-SRGRMLLTFICKED 230 (384)
T ss_dssp ----CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHHHHHHHHHEE-EEEEEEEEEECCCT
T ss_pred ccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhc-cCCeEEEEEecCCC
Confidence 333489999 99999877665443
No 227
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=98.04 E-value=5e-06 Score=67.76 Aligned_cols=72 Identities=17% Similarity=0.093 Sum_probs=53.2
Q ss_pred CCeEEEEeCCHHHHHHhhcC------C-CceEEecCCCCcchhhccCCCCCCce---eeeeech-----------hhcc-
Q 035840 5 YKNVIATDTSPKQLEFAIKL------P-NIRYQLTPPTMSITELEQNVATQSSV---DLVTIAA-----------ALHW- 62 (213)
Q Consensus 5 ~~~V~gvD~S~~ml~~Ar~~------~-~v~~~~~~~~~~~~d~~~~~~~~~sf---DlV~~~~-----------~~hw- 62 (213)
..+|+|+|+|+.|++.|++. . +++|..+++ .+ +++ ++| |+|+++- .+.|
T Consensus 146 ~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~-------~~-~~~-~~f~~~D~IvsnPPyi~~~~~l~~~v~~e 216 (284)
T 1nv8_A 146 DAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEF-------LE-PFK-EKFASIEMILSNPPYVKSSAHLPKDVLFE 216 (284)
T ss_dssp SCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESST-------TG-GGG-GGTTTCCEEEECCCCBCGGGSCTTSCCCS
T ss_pred CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcc-------hh-hcc-cccCCCCEEEEcCCCCCcccccChhhccC
Confidence 57999999999999999972 2 388999887 33 122 478 9999961 1111
Q ss_pred --------CChhHHHHHHH-HHhcCCCeEEEEE
Q 035840 63 --------FDLPQFYKQVK-WVLKKPNGVIAAW 86 (213)
Q Consensus 63 --------~d~~~~~~e~~-rvLk~pgG~l~~~ 86 (213)
.|...+++++. +.|+ |||.|++.
T Consensus 217 p~~al~~~~dgl~~~~~i~~~~l~-pgG~l~~e 248 (284)
T 1nv8_A 217 PPEALFGGEDGLDFYREFFGRYDT-SGKIVLME 248 (284)
T ss_dssp CHHHHBCTTTSCHHHHHHHHHCCC-TTCEEEEE
T ss_pred cHHHhcCCCcHHHHHHHHHHhcCC-CCCEEEEE
Confidence 12337899999 9999 99999763
No 228
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=98.02 E-value=8.2e-06 Score=62.45 Aligned_cols=69 Identities=13% Similarity=0.052 Sum_probs=48.9
Q ss_pred CCeEEEEeCCHHHHHHhhcC-CCceEEecCCCCcchhhccCCCCCCceeeeeechhhccCCh---hHHHHHHHHHhcCCC
Q 035840 5 YKNVIATDTSPKQLEFAIKL-PNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWFDL---PQFYKQVKWVLKKPN 80 (213)
Q Consensus 5 ~~~V~gvD~S~~ml~~Ar~~-~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~d~---~~~~~e~~rvLk~pg 80 (213)
..+|+|+|+|+.|++.|++. .++++..+++ .+++ ++||+|++...+||... ...++++.+++
T Consensus 74 ~~~v~~vD~~~~~~~~a~~~~~~~~~~~~d~-------~~~~---~~~D~v~~~~p~~~~~~~~~~~~l~~~~~~~---- 139 (200)
T 1ne2_A 74 AESVTAFDIDPDAIETAKRNCGGVNFMVADV-------SEIS---GKYDTWIMNPPFGSVVKHSDRAFIDKAFETS---- 139 (200)
T ss_dssp BSEEEEEESCHHHHHHHHHHCTTSEEEECCG-------GGCC---CCEEEEEECCCC-------CHHHHHHHHHHE----
T ss_pred CCEEEEEECCHHHHHHHHHhcCCCEEEECcH-------HHCC---CCeeEEEECCCchhccCchhHHHHHHHHHhc----
Confidence 34799999999999999974 3788888887 6653 68999999999998832 35666666655
Q ss_pred eEEEEEe
Q 035840 81 GVIAAWT 87 (213)
Q Consensus 81 G~l~~~~ 87 (213)
|.+++.+
T Consensus 140 g~~~~~~ 146 (200)
T 1ne2_A 140 MWIYSIG 146 (200)
T ss_dssp EEEEEEE
T ss_pred CcEEEEE
Confidence 4454443
No 229
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=98.00 E-value=5.4e-06 Score=70.69 Aligned_cols=80 Identities=10% Similarity=0.052 Sum_probs=54.6
Q ss_pred cccCCeEEEEeCCHHHHHHhhcC-----CCceEEecCCCCcchhhccC-CCCCCceeeeeechh---------hccC-Ch
Q 035840 2 AKIYKNVIATDTSPKQLEFAIKL-----PNIRYQLTPPTMSITELEQN-VATQSSVDLVTIAAA---------LHWF-DL 65 (213)
Q Consensus 2 a~~~~~V~gvD~S~~ml~~Ar~~-----~~v~~~~~~~~~~~~d~~~~-~~~~~sfDlV~~~~~---------~hw~-d~ 65 (213)
|...++|+|+|+|+.|++.|++. -..++.++++ .++ +..++.||+|++.-- .... +.
T Consensus 233 a~~ga~V~avDis~~al~~a~~n~~~ng~~~~~~~~D~-------~~~l~~~~~~fD~Ii~dpP~f~~~~~~~~~~~~~~ 305 (393)
T 4dmg_A 233 ARKGAYALAVDKDLEALGVLDQAALRLGLRVDIRHGEA-------LPTLRGLEGPFHHVLLDPPTLVKRPEELPAMKRHL 305 (393)
T ss_dssp HHTTCEEEEEESCHHHHHHHHHHHHHHTCCCEEEESCH-------HHHHHTCCCCEEEEEECCCCCCSSGGGHHHHHHHH
T ss_pred HHcCCeEEEEECCHHHHHHHHHHHHHhCCCCcEEEccH-------HHHHHHhcCCCCEEEECCCcCCCCHHHHHHHHHHH
Confidence 44566799999999999999972 1235666666 332 111334999996321 1222 55
Q ss_pred hHHHHHHHHHhcCCCeEEEEEeCC
Q 035840 66 PQFYKQVKWVLKKPNGVIAAWTYT 89 (213)
Q Consensus 66 ~~~~~e~~rvLk~pgG~l~~~~~~ 89 (213)
..++.++.++|| |||.|++.+..
T Consensus 306 ~~ll~~a~~~Lk-pGG~Lv~~s~s 328 (393)
T 4dmg_A 306 VDLVREALRLLA-EEGFLWLSSCS 328 (393)
T ss_dssp HHHHHHHHHTEE-EEEEEEEEECC
T ss_pred HHHHHHHHHhcC-CCCEEEEEECC
Confidence 688899999999 99999855544
No 230
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=97.98 E-value=1.5e-05 Score=67.46 Aligned_cols=69 Identities=19% Similarity=0.151 Sum_probs=54.9
Q ss_pred CeEEEEeCCHHHHHHhhcC-------CCceEEecCCCCcchhhccCCCCCCceeeeee---chhhccC-ChhHHHHHHHH
Q 035840 6 KNVIATDTSPKQLEFAIKL-------PNIRYQLTPPTMSITELEQNVATQSSVDLVTI---AAALHWF-DLPQFYKQVKW 74 (213)
Q Consensus 6 ~~V~gvD~S~~ml~~Ar~~-------~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~---~~~~hw~-d~~~~~~e~~r 74 (213)
++|+|||.|+ |++.|++. ..|++..+++ +++.++ ..||+|++ ...+.+- ..+.++....|
T Consensus 107 ~~V~ave~s~-~~~~a~~~~~~n~~~~~i~~i~~~~-------~~~~lp-e~~DvivsE~~~~~l~~e~~l~~~l~a~~r 177 (376)
T 4hc4_A 107 RRVYAVEASA-IWQQAREVVRFNGLEDRVHVLPGPV-------ETVELP-EQVDAIVSEWMGYGLLHESMLSSVLHARTK 177 (376)
T ss_dssp SEEEEEECST-THHHHHHHHHHTTCTTTEEEEESCT-------TTCCCS-SCEEEEECCCCBTTBTTTCSHHHHHHHHHH
T ss_pred CEEEEEeChH-HHHHHHHHHHHcCCCceEEEEeeee-------eeecCC-ccccEEEeecccccccccchhhhHHHHHHh
Confidence 4899999996 99999872 4688888887 666665 56999997 4555555 67788888899
Q ss_pred HhcCCCeEEE
Q 035840 75 VLKKPNGVIA 84 (213)
Q Consensus 75 vLk~pgG~l~ 84 (213)
.|| |||.++
T Consensus 178 ~Lk-p~G~~i 186 (376)
T 4hc4_A 178 WLK-EGGLLL 186 (376)
T ss_dssp HEE-EEEEEE
T ss_pred hCC-CCceEC
Confidence 999 999985
No 231
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=97.97 E-value=3.1e-06 Score=72.14 Aligned_cols=80 Identities=11% Similarity=0.145 Sum_probs=58.9
Q ss_pred ccc-CCeEEEEeCCHHHHHHhhcC-------C-CceEEecCCCCcchhhccCC----CCCCceeeeeech---------h
Q 035840 2 AKI-YKNVIATDTSPKQLEFAIKL-------P-NIRYQLTPPTMSITELEQNV----ATQSSVDLVTIAA---------A 59 (213)
Q Consensus 2 a~~-~~~V~gvD~S~~ml~~Ar~~-------~-~v~~~~~~~~~~~~d~~~~~----~~~~sfDlV~~~~---------~ 59 (213)
|.. .++|+|+|+|+.+++.|++. + ++++..+++ .++. -.+.+||+|++.- .
T Consensus 239 a~~g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~-------~~~~~~~~~~~~~fD~Ii~dpP~~~~~~~~~ 311 (396)
T 3c0k_A 239 LMGGCSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDV-------FKLLRTYRDRGEKFDVIVMDPPKFVENKSQL 311 (396)
T ss_dssp HHTTCSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCH-------HHHHHHHHHTTCCEEEEEECCSSTTTCSSSS
T ss_pred HHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCH-------HHHHHHHHhcCCCCCEEEECCCCCCCChhHH
Confidence 344 46999999999999999972 2 678888887 3321 1256799999752 2
Q ss_pred hccC-ChhHHHHHHHHHhcCCCeEEEEEeCC
Q 035840 60 LHWF-DLPQFYKQVKWVLKKPNGVIAAWTYT 89 (213)
Q Consensus 60 ~hw~-d~~~~~~e~~rvLk~pgG~l~~~~~~ 89 (213)
.+.. +....+.++.++|+ |||.+++.+..
T Consensus 312 ~~~~~~~~~~l~~~~~~Lk-pgG~l~~~~~~ 341 (396)
T 3c0k_A 312 MGACRGYKDINMLAIQLLN-EGGILLTFSCS 341 (396)
T ss_dssp SCCCTHHHHHHHHHHHTEE-EEEEEEEEECC
T ss_pred HHHHHHHHHHHHHHHHhcC-CCcEEEEEeCC
Confidence 2233 56788899999999 99999877654
No 232
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=97.94 E-value=1.7e-05 Score=66.18 Aligned_cols=73 Identities=19% Similarity=0.147 Sum_probs=57.2
Q ss_pred cCCeEEEEeCCHHHHHHhhcC-------CCceEEecCCCCcchhhccCCCCCCceeeeeechhhccCChhHHHHHHHHHh
Q 035840 4 IYKNVIATDTSPKQLEFAIKL-------PNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWFDLPQFYKQVKWVL 76 (213)
Q Consensus 4 ~~~~V~gvD~S~~ml~~Ar~~-------~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~d~~~~~~e~~rvL 76 (213)
...+|+|+|+|+.+++.|++. +++++..+++ .++. ++||+|++.--. ....++.++.++|
T Consensus 215 ~~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~-------~~~~---~~fD~Vi~dpP~---~~~~~l~~~~~~L 281 (336)
T 2yx1_A 215 NAKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDV-------REVD---VKGNRVIMNLPK---FAHKFIDKALDIV 281 (336)
T ss_dssp TSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCG-------GGCC---CCEEEEEECCTT---TGGGGHHHHHHHE
T ss_pred CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCh-------HHhc---CCCcEEEECCcH---hHHHHHHHHHHHc
Confidence 467999999999999999972 4688888887 5543 789999985221 2348899999999
Q ss_pred cCCCeEEEEEeCCC
Q 035840 77 KKPNGVIAAWTYTM 90 (213)
Q Consensus 77 k~pgG~l~~~~~~~ 90 (213)
+ |||.+.+.++..
T Consensus 282 ~-~gG~l~~~~~~~ 294 (336)
T 2yx1_A 282 E-EGGVIHYYTIGK 294 (336)
T ss_dssp E-EEEEEEEEEEES
T ss_pred C-CCCEEEEEEeec
Confidence 9 999998765543
No 233
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=97.94 E-value=7e-06 Score=74.95 Aligned_cols=77 Identities=21% Similarity=0.174 Sum_probs=58.9
Q ss_pred CCeEEEEeCCHHHHHHhhcC--------CCceEEecCCCCcchhhcc-CCCCCCceeeeeech-----------hhccC-
Q 035840 5 YKNVIATDTSPKQLEFAIKL--------PNIRYQLTPPTMSITELEQ-NVATQSSVDLVTIAA-----------ALHWF- 63 (213)
Q Consensus 5 ~~~V~gvD~S~~ml~~Ar~~--------~~v~~~~~~~~~~~~d~~~-~~~~~~sfDlV~~~~-----------~~hw~- 63 (213)
..+|+|||+|+.|++.|++. .++++.++|+ .+ ++..+++||+|++.- .++..
T Consensus 562 a~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~-------~~~l~~~~~~fD~Ii~DPP~f~~~~~~~~~~~~~~ 634 (703)
T 3v97_A 562 ARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADC-------LAWLREANEQFDLIFIDPPTFSNSKRMEDAFDVQR 634 (703)
T ss_dssp CSEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCH-------HHHHHHCCCCEEEEEECCCSBC-------CCBHHH
T ss_pred CCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCH-------HHHHHhcCCCccEEEECCccccCCccchhHHHHHH
Confidence 34799999999999999972 2688888887 33 333467899999732 34444
Q ss_pred ChhHHHHHHHHHhcCCCeEEEEEeCC
Q 035840 64 DLPQFYKQVKWVLKKPNGVIAAWTYT 89 (213)
Q Consensus 64 d~~~~~~e~~rvLk~pgG~l~~~~~~ 89 (213)
+....+.++.++|| |||.|++.+..
T Consensus 635 ~~~~ll~~a~~~Lk-pgG~L~~s~~~ 659 (703)
T 3v97_A 635 DHLALMKDLKRLLR-AGGTIMFSNNK 659 (703)
T ss_dssp HHHHHHHHHHHHEE-EEEEEEEEECC
T ss_pred HHHHHHHHHHHhcC-CCcEEEEEECC
Confidence 77888999999999 99999866544
No 234
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=97.92 E-value=4.4e-05 Score=63.99 Aligned_cols=73 Identities=22% Similarity=0.286 Sum_probs=57.9
Q ss_pred eEEEEeCCHHHHHHhhcC------CCceEEecCCCCcchhhccCCCCCCceeeeeechhhc-cCCh--hHHHHHHHHHhc
Q 035840 7 NVIATDTSPKQLEFAIKL------PNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALH-WFDL--PQFYKQVKWVLK 77 (213)
Q Consensus 7 ~V~gvD~S~~ml~~Ar~~------~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~h-w~d~--~~~~~e~~rvLk 77 (213)
+++..|. |.+++.|++. ++|+++.+|. .+-|++ .+|+|++...+| |-|. .+.+++++++|+
T Consensus 205 ~~~~~dl-p~v~~~a~~~~~~~~~~rv~~~~gD~-------~~~~~~--~~D~~~~~~vlh~~~d~~~~~iL~~~~~al~ 274 (353)
T 4a6d_A 205 KITVFDI-PEVVWTAKQHFSFQEEEQIDFQEGDF-------FKDPLP--EADLYILARVLHDWADGKCSHLLERIYHTCK 274 (353)
T ss_dssp EEEEEEC-HHHHHHHHHHSCC--CCSEEEEESCT-------TTSCCC--CCSEEEEESSGGGSCHHHHHHHHHHHHHHCC
T ss_pred eeEeccC-HHHHHHHHHhhhhcccCceeeecCcc-------ccCCCC--CceEEEeeeecccCCHHHHHHHHHHHHhhCC
Confidence 6788887 8999999872 5788888876 333443 479999999999 5554 577999999999
Q ss_pred CCCeEEEEEeCCC
Q 035840 78 KPNGVIAAWTYTM 90 (213)
Q Consensus 78 ~pgG~l~~~~~~~ 90 (213)
|||+|++.....
T Consensus 275 -pgg~lli~e~~~ 286 (353)
T 4a6d_A 275 -PGGGILVIESLL 286 (353)
T ss_dssp -TTCEEEEEECCC
T ss_pred -CCCEEEEEEeee
Confidence 999999887653
No 235
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=97.91 E-value=1.1e-05 Score=67.83 Aligned_cols=79 Identities=13% Similarity=0.299 Sum_probs=60.1
Q ss_pred eEEEEeCCHHHHHHhhc-CC------CceEEecCCCCcchhhccCCCCCCceeeeeechhhccC-ChhH-----------
Q 035840 7 NVIATDTSPKQLEFAIK-LP------NIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWF-DLPQ----------- 67 (213)
Q Consensus 7 ~V~gvD~S~~ml~~Ar~-~~------~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~-d~~~----------- 67 (213)
+|+..|+..++-...-+ .+ +..|..+.+ ++|..-.|+++|+|+|+++.|+||+ +.+.
T Consensus 93 ~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvp----gSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~ 168 (359)
T 1m6e_X 93 QIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVP----GSFYGRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYM 168 (359)
T ss_dssp EEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEE----SCSSSCCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSS
T ss_pred EEEecCCCchHHHHHHHhcchhcccCCCEEEEecc----hhhhhccCCCCceEEEEehhhhhhcccCchhhhccCCceEe
Confidence 68889999988887665 23 235666544 4566677999999999999999999 5332
Q ss_pred ----------------------HHHHHHHHhcCCCeEEEEEeCCC
Q 035840 68 ----------------------FYKQVKWVLKKPNGVIAAWTYTM 90 (213)
Q Consensus 68 ----------------------~~~e~~rvLk~pgG~l~~~~~~~ 90 (213)
+|+..++.|+ |||++++...+.
T Consensus 169 ~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~-pGG~mvl~~~gr 212 (359)
T 1m6e_X 169 ANTCPQSVLNAYYKQFQEDHALFLRCRAQEVV-PGGRMVLTILGR 212 (359)
T ss_dssp CSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBC-TTCEEEEEEEEC
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCceEEEEEecC
Confidence 2777899999 999998665443
No 236
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=97.87 E-value=1.5e-05 Score=68.66 Aligned_cols=76 Identities=13% Similarity=0.095 Sum_probs=55.7
Q ss_pred CeEEEEeCCHHHHHHhhcC-----CCceEEecCCCCcchhhccCC--CCCCceeeeee---chhhccC--Ch--------
Q 035840 6 KNVIATDTSPKQLEFAIKL-----PNIRYQLTPPTMSITELEQNV--ATQSSVDLVTI---AAALHWF--DL-------- 65 (213)
Q Consensus 6 ~~V~gvD~S~~ml~~Ar~~-----~~v~~~~~~~~~~~~d~~~~~--~~~~sfDlV~~---~~~~hw~--d~-------- 65 (213)
++|+|+|+|+.+++.+++. .++.+..+++ .+.+ +++++||+|++ +.+...+ ++
T Consensus 271 ~~v~a~D~~~~~l~~~~~~~~~~g~~~~~~~~D~-------~~~~~~~~~~~fD~Vl~D~Pcsg~g~~~~~p~~~~~~~~ 343 (429)
T 1sqg_A 271 AQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDG-------RYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRD 343 (429)
T ss_dssp CEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCT-------TCTHHHHTTCCEEEEEEECCCCCGGGTTTCTTHHHHCCT
T ss_pred CEEEEECCCHHHHHHHHHHHHHcCCCeEEEeCch-------hhchhhcccCCCCEEEEeCCCCcccccCCCcchhhcCCH
Confidence 6999999999999999872 2467778777 4443 45678999996 3333221 11
Q ss_pred ----------hHHHHHHHHHhcCCCeEEEEEeCC
Q 035840 66 ----------PQFYKQVKWVLKKPNGVIAAWTYT 89 (213)
Q Consensus 66 ----------~~~~~e~~rvLk~pgG~l~~~~~~ 89 (213)
...+.++.++|| |||.|++.+..
T Consensus 344 ~~~~~l~~~q~~~L~~a~~~Lk-pGG~lvystcs 376 (429)
T 1sqg_A 344 RDIPELAQLQSEILDAIWPHLK-TGGTLVYATCS 376 (429)
T ss_dssp THHHHHHHHHHHHHHHHGGGEE-EEEEEEEEESC
T ss_pred HHHHHHHHHHHHHHHHHHHhcC-CCCEEEEEECC
Confidence 377899999999 99999876543
No 237
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=97.85 E-value=1.3e-05 Score=69.60 Aligned_cols=76 Identities=16% Similarity=0.171 Sum_probs=54.6
Q ss_pred CCeEEEEeCCHHHHHHhhc------CCCceEEecCCCCcchhhccCC-CCCCceeeeee---chhhccC--Ch-------
Q 035840 5 YKNVIATDTSPKQLEFAIK------LPNIRYQLTPPTMSITELEQNV-ATQSSVDLVTI---AAALHWF--DL------- 65 (213)
Q Consensus 5 ~~~V~gvD~S~~ml~~Ar~------~~~v~~~~~~~~~~~~d~~~~~-~~~~sfDlV~~---~~~~hw~--d~------- 65 (213)
.++|+|+|+|+.|++.+++ ..++.+..+++ .+++ ..+++||+|++ +.+..-+ ++
T Consensus 130 ~g~V~AvDis~~rl~~~~~n~~r~g~~nv~v~~~Da-------~~l~~~~~~~FD~Il~DaPCSg~G~~rr~p~~~~~~~ 202 (456)
T 3m4x_A 130 KGLLVTNEIFPKRAKILSENIERWGVSNAIVTNHAP-------AELVPHFSGFFDRIVVDAPCSGEGMFRKDPNAIKEWT 202 (456)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHHTCSSEEEECCCH-------HHHHHHHTTCEEEEEEECCCCCGGGTTTCHHHHHHCC
T ss_pred CCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeCCH-------HHhhhhccccCCEEEECCCCCCccccccCHHHhhhcC
Confidence 3689999999999999987 25677777776 4432 23578999996 2222211 22
Q ss_pred -----------hHHHHHHHHHhcCCCeEEEEEeC
Q 035840 66 -----------PQFYKQVKWVLKKPNGVIAAWTY 88 (213)
Q Consensus 66 -----------~~~~~e~~rvLk~pgG~l~~~~~ 88 (213)
...+.++.++|| |||.|+..+.
T Consensus 203 ~~~~~~l~~~Q~~iL~~a~~~Lk-pGG~LvYsTC 235 (456)
T 3m4x_A 203 EESPLYCQKRQQEILSSAIKMLK-NKGQLIYSTC 235 (456)
T ss_dssp TTHHHHHHHHHHHHHHHHHHTEE-EEEEEEEEES
T ss_pred HHHHHHHHHHHHHHHHHHHHhcC-CCcEEEEEEe
Confidence 267899999999 9999976543
No 238
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=97.85 E-value=3.7e-05 Score=66.13 Aligned_cols=74 Identities=19% Similarity=0.174 Sum_probs=52.2
Q ss_pred CcccCCeEEEEeCCHHHHHHhhcC------CCceEEecCCCCcchhhccCCCCCCceeeeeechhhccCChh-HHHHHHH
Q 035840 1 LAKIYKNVIATDTSPKQLEFAIKL------PNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWFDLP-QFYKQVK 73 (213)
Q Consensus 1 la~~~~~V~gvD~S~~ml~~Ar~~------~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~d~~-~~~~e~~ 73 (213)
||+.+.+|+|+|+|+.|++.|++. . ++|..+++ +++. ++ +||+|++.--- .... .+++.+
T Consensus 308 la~~~~~V~gvD~s~~ai~~A~~n~~~ngl~-v~~~~~d~-------~~~~-~~-~fD~Vv~dPPr--~g~~~~~~~~l- 374 (425)
T 2jjq_A 308 LAKRGFNVKGFDSNEFAIEMARRNVEINNVD-AEFEVASD-------REVS-VK-GFDTVIVDPPR--AGLHPRLVKRL- 374 (425)
T ss_dssp HHHTTCEEEEEESCHHHHHHHHHHHHHHTCC-EEEEECCT-------TTCC-CT-TCSEEEECCCT--TCSCHHHHHHH-
T ss_pred HHHcCCEEEEEECCHHHHHHHHHHHHHcCCc-EEEEECCh-------HHcC-cc-CCCEEEEcCCc--cchHHHHHHHH-
Confidence 356678999999999999999973 3 78888888 5543 22 79999974321 1122 344444
Q ss_pred HHhcCCCeEEEEEeC
Q 035840 74 WVLKKPNGVIAAWTY 88 (213)
Q Consensus 74 rvLk~pgG~l~~~~~ 88 (213)
+.|+ |||.+++.+.
T Consensus 375 ~~l~-p~givyvsc~ 388 (425)
T 2jjq_A 375 NREK-PGVIVYVSCN 388 (425)
T ss_dssp HHHC-CSEEEEEESC
T ss_pred HhcC-CCcEEEEECC
Confidence 5699 9999988753
No 239
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=97.83 E-value=1.3e-05 Score=69.72 Aligned_cols=74 Identities=19% Similarity=0.262 Sum_probs=53.3
Q ss_pred CeEEEEeCCHHHHHHhhcC------CCceEEecCCCCcchhhccCC-CCCCceeeeee---chhhc-----------cC-
Q 035840 6 KNVIATDTSPKQLEFAIKL------PNIRYQLTPPTMSITELEQNV-ATQSSVDLVTI---AAALH-----------WF- 63 (213)
Q Consensus 6 ~~V~gvD~S~~ml~~Ar~~------~~v~~~~~~~~~~~~d~~~~~-~~~~sfDlV~~---~~~~h-----------w~- 63 (213)
++|+|+|+|+.|++.+++. . +.+..+++ .+++ ..+++||+|++ +.+.. |-
T Consensus 127 g~V~AvDis~~~l~~a~~n~~r~G~~-v~~~~~Da-------~~l~~~~~~~FD~Il~D~PcSg~G~~rr~pd~~~~~~~ 198 (464)
T 3m6w_A 127 GLLLANEVDGKRVRGLLENVERWGAP-LAVTQAPP-------RALAEAFGTYFHRVLLDAPCSGEGMFRKDREAARHWGP 198 (464)
T ss_dssp SEEEEECSCHHHHHHHHHHHHHHCCC-CEEECSCH-------HHHHHHHCSCEEEEEEECCCCCGGGTTTCTTSGGGCCT
T ss_pred CEEEEEECCHHHHHHHHHHHHHcCCe-EEEEECCH-------HHhhhhccccCCEEEECCCcCCccccccChHHhhhcCH
Confidence 6899999999999999872 3 67777776 4443 24678999995 22211 11
Q ss_pred -C-------hhHHHHHHHHHhcCCCeEEEEEeC
Q 035840 64 -D-------LPQFYKQVKWVLKKPNGVIAAWTY 88 (213)
Q Consensus 64 -d-------~~~~~~e~~rvLk~pgG~l~~~~~ 88 (213)
+ ....+.++.++|| |||.|++.+.
T Consensus 199 ~~~~~l~~~Q~~iL~~a~~~Lk-pGG~LvysTC 230 (464)
T 3m6w_A 199 SAPKRMAEVQKALLAQASRLLG-PGGVLVYSTC 230 (464)
T ss_dssp THHHHHHHHHHHHHHHHHTTEE-EEEEEEEEES
T ss_pred HHHHHHHHHHHHHHHHHHHhcC-CCcEEEEEec
Confidence 0 1678899999999 9999986543
No 240
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=97.79 E-value=2.5e-05 Score=64.02 Aligned_cols=54 Identities=19% Similarity=0.140 Sum_probs=40.2
Q ss_pred CcccCCeEEEEeCCHHHHHHhhcC------CCceEEecCCCCcchhhccCCCCCCceeeeeechhhccC
Q 035840 1 LAKIYKNVIATDTSPKQLEFAIKL------PNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWF 63 (213)
Q Consensus 1 la~~~~~V~gvD~S~~ml~~Ar~~------~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~ 63 (213)
|++..++|+|+|+|+.|++.|++. +++++..+++ .+.++ .+||+|+++...+|.
T Consensus 60 La~~~~~v~~vDi~~~~~~~a~~~~~~~~~~~v~~~~~D~-------~~~~~--~~~D~Vv~n~py~~~ 119 (299)
T 2h1r_A 60 LLPLAKKVITIDIDSRMISEVKKRCLYEGYNNLEVYEGDA-------IKTVF--PKFDVCTANIPYKIS 119 (299)
T ss_dssp HTTTSSEEEEECSCHHHHHHHHHHHHHTTCCCEEC----C-------CSSCC--CCCSEEEEECCGGGH
T ss_pred HHhcCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEECch-------hhCCc--ccCCEEEEcCCcccc
Confidence 356678999999999999999862 5677888777 66554 379999999888876
No 241
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=97.74 E-value=9.1e-07 Score=70.45 Aligned_cols=77 Identities=10% Similarity=-0.002 Sum_probs=56.8
Q ss_pred cccCCeEEEEeCCHHHHHHhhcC----CCceEEecCCCCcchhhccCCCCC-Cceeeeeech------------hhccCC
Q 035840 2 AKIYKNVIATDTSPKQLEFAIKL----PNIRYQLTPPTMSITELEQNVATQ-SSVDLVTIAA------------ALHWFD 64 (213)
Q Consensus 2 a~~~~~V~gvD~S~~ml~~Ar~~----~~v~~~~~~~~~~~~d~~~~~~~~-~sfDlV~~~~------------~~hw~d 64 (213)
+.++.+|+|+|+|+.|++.|++. +++++..+|+ .++++++ ++| .|+++- +.|+.+
T Consensus 48 ~~~~~~v~~id~~~~~~~~a~~~~~~~~~v~~~~~D~-------~~~~~~~~~~f-~vv~n~Py~~~~~~~~~~~~~~~~ 119 (245)
T 1yub_A 48 AKISKQVTSIELDSHLFNLSSEKLKLNTRVTLIHQDI-------LQFQFPNKQRY-KIVGNIPYHLSTQIIKKVVFESRA 119 (245)
T ss_dssp HHHSSEEEESSSSCSSSSSSSCTTTTCSEEEECCSCC-------TTTTCCCSSEE-EEEEECCSSSCHHHHHHHHHHCCC
T ss_pred HHhCCeEEEEECCHHHHHHHHHHhccCCceEEEECCh-------hhcCcccCCCc-EEEEeCCccccHHHHHHHHhCCCC
Confidence 45568999999999999999874 3577777777 7777664 688 565541 224446
Q ss_pred hhHHH----HHHHHHhcCCCeEEEEEe
Q 035840 65 LPQFY----KQVKWVLKKPNGVIAAWT 87 (213)
Q Consensus 65 ~~~~~----~e~~rvLk~pgG~l~~~~ 87 (213)
....+ +.+.|+|+ |||.+.+..
T Consensus 120 ~~~~lm~q~e~a~rll~-~~G~l~v~~ 145 (245)
T 1yub_A 120 SDIYLIVEEGFYKRTLD-IHRTLGLLL 145 (245)
T ss_dssp EEEEEEEESSHHHHHHC-GGGSHHHHT
T ss_pred CeEEEEeeHHHHHHHhC-CCCchhhhh
Confidence 66677 77999999 999986543
No 242
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=97.73 E-value=6e-05 Score=64.93 Aligned_cols=81 Identities=15% Similarity=0.141 Sum_probs=54.4
Q ss_pred CcccCCeEEEEeCCHHHHHHhhcC------CCceEEecCCCCcchhhccCCCCCCceeeeeechhhccCChhHHHHHHHH
Q 035840 1 LAKIYKNVIATDTSPKQLEFAIKL------PNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWFDLPQFYKQVKW 74 (213)
Q Consensus 1 la~~~~~V~gvD~S~~ml~~Ar~~------~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~d~~~~~~e~~r 74 (213)
||....+|+|+|+|+.|++.|++. ++++|..++++. .+..+++.+++||+|++.---... ...+..+.
T Consensus 304 la~~~~~V~gvD~s~~al~~A~~n~~~~~~~~v~f~~~d~~~---~l~~~~~~~~~fD~Vv~dPPr~g~--~~~~~~l~- 377 (433)
T 1uwv_A 304 LATQAASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEE---DVTKQPWAKNGFDKVLLDPARAGA--AGVMQQII- 377 (433)
T ss_dssp HHTTSSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCTTS---CCSSSGGGTTCCSEEEECCCTTCC--HHHHHHHH-
T ss_pred HHhhCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEECCHHH---HhhhhhhhcCCCCEEEECCCCccH--HHHHHHHH-
Confidence 356678999999999999999972 478999998831 012244567789999974222211 23444443
Q ss_pred HhcCCCeEEEEEeC
Q 035840 75 VLKKPNGVIAAWTY 88 (213)
Q Consensus 75 vLk~pgG~l~~~~~ 88 (213)
-++ |++.+++.+.
T Consensus 378 ~~~-p~~ivyvsc~ 390 (433)
T 1uwv_A 378 KLE-PIRIVYVSCN 390 (433)
T ss_dssp HHC-CSEEEEEESC
T ss_pred hcC-CCeEEEEECC
Confidence 378 8888877654
No 243
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=97.72 E-value=2.1e-05 Score=66.51 Aligned_cols=51 Identities=18% Similarity=0.362 Sum_probs=40.4
Q ss_pred hhccCCCCCCceeeeeechhhccC-ChhH--------------------------------------HHHHHHHHhcCCC
Q 035840 40 ELEQNVATQSSVDLVTIAAALHWF-DLPQ--------------------------------------FYKQVKWVLKKPN 80 (213)
Q Consensus 40 d~~~~~~~~~sfDlV~~~~~~hw~-d~~~--------------------------------------~~~e~~rvLk~pg 80 (213)
+|..-.++++|||+|+++.|+||+ +.+. +++..+|.|+ ||
T Consensus 140 SFy~rlfP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~ra~eL~-pG 218 (374)
T 3b5i_A 140 SFYRRLFPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRARAAEVK-RG 218 (374)
T ss_dssp CTTSCCSCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHEE-EE
T ss_pred hhhcccCCCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhC-CC
Confidence 455566899999999999999999 4442 4677899999 99
Q ss_pred eEEEEEeCCCC
Q 035840 81 GVIAAWTYTMP 91 (213)
Q Consensus 81 G~l~~~~~~~~ 91 (213)
|++++...+.+
T Consensus 219 G~mvl~~~gr~ 229 (374)
T 3b5i_A 219 GAMFLVCLGRT 229 (374)
T ss_dssp EEEEEEEEECC
T ss_pred CEEEEEEecCC
Confidence 99986655543
No 244
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=97.70 E-value=4.1e-05 Score=64.66 Aligned_cols=64 Identities=19% Similarity=0.156 Sum_probs=48.6
Q ss_pred eEEEEeCCHHHHHHhhcC-------CCceEEecCCCCcchhhccCCCCCCceeeeeechhhccC-----Ch----hHHHH
Q 035840 7 NVIATDTSPKQLEFAIKL-------PNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWF-----DL----PQFYK 70 (213)
Q Consensus 7 ~V~gvD~S~~ml~~Ar~~-------~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~-----d~----~~~~~ 70 (213)
+|+|+|+|+.|++.|++. .++++.++++ .++++++++||+|+++--++.. +. ..++.
T Consensus 243 ~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~-------~~~~~~~~~fD~Ii~npPyg~r~~~~~~~~~ly~~~~~ 315 (373)
T 3tm4_A 243 EIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDA-------TQLSQYVDSVDFAISNLPYGLKIGKKSMIPDLYMKFFN 315 (373)
T ss_dssp CEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCG-------GGGGGTCSCEEEEEEECCCC------CCHHHHHHHHHH
T ss_pred eEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECCh-------hhCCcccCCcCEEEECCCCCcccCcchhHHHHHHHHHH
Confidence 899999999999999973 3678888887 7778888899999997554321 12 45666
Q ss_pred HHHHHhc
Q 035840 71 QVKWVLK 77 (213)
Q Consensus 71 e~~rvLk 77 (213)
++.|+|.
T Consensus 316 ~l~r~l~ 322 (373)
T 3tm4_A 316 ELAKVLE 322 (373)
T ss_dssp HHHHHEE
T ss_pred HHHHHcC
Confidence 7777664
No 245
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=97.70 E-value=2.8e-05 Score=65.60 Aligned_cols=81 Identities=12% Similarity=0.142 Sum_probs=56.2
Q ss_pred CcccCCeEEEEeCCHHHHHHhhc------CCCceEEecCCCCcchhhcc---------CCCCCCceeeeeechhhccCCh
Q 035840 1 LAKIYKNVIATDTSPKQLEFAIK------LPNIRYQLTPPTMSITELEQ---------NVATQSSVDLVTIAAALHWFDL 65 (213)
Q Consensus 1 la~~~~~V~gvD~S~~ml~~Ar~------~~~v~~~~~~~~~~~~d~~~---------~~~~~~sfDlV~~~~~~hw~d~ 65 (213)
||+.+++|+|+|+|+.|++.|++ ..+++|..++++.....+.. ..+.+.+||+|++ ||
T Consensus 231 la~~~~~V~gvd~~~~ai~~a~~n~~~ng~~~v~~~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~fD~Vv~-------dP 303 (369)
T 3bt7_A 231 LARNFDRVLATEIAKPSVAAAQYNIAANHIDNVQIIRMAAEEFTQAMNGVREFNRLQGIDLKSYQCETIFV-------DP 303 (369)
T ss_dssp HGGGSSEEEEECCCHHHHHHHHHHHHHTTCCSEEEECCCSHHHHHHHSSCCCCTTGGGSCGGGCCEEEEEE-------CC
T ss_pred HHhcCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEECCHHHHHHHHhhccccccccccccccCCCCEEEE-------Cc
Confidence 46678899999999999999986 25788999888321100000 0001137999974 66
Q ss_pred hH--HHHHHHHHhcCCCeEEEEEeCC
Q 035840 66 PQ--FYKQVKWVLKKPNGVIAAWTYT 89 (213)
Q Consensus 66 ~~--~~~e~~rvLk~pgG~l~~~~~~ 89 (213)
+. +..++.+.|+ |+|.+++.+.+
T Consensus 304 Pr~g~~~~~~~~l~-~~g~ivyvsc~ 328 (369)
T 3bt7_A 304 PRSGLDSETEKMVQ-AYPRILYISCN 328 (369)
T ss_dssp CTTCCCHHHHHHHT-TSSEEEEEESC
T ss_pred CccccHHHHHHHHh-CCCEEEEEECC
Confidence 55 3688999999 89998766554
No 246
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=97.57 E-value=0.0002 Score=56.82 Aligned_cols=73 Identities=11% Similarity=0.039 Sum_probs=56.9
Q ss_pred CCeEEEEeCCHHHHHHhhcC-----CCceEEecCCCCcchhhccCCCCCCceeeeeechhhccC---ChhHHHHHHHHHh
Q 035840 5 YKNVIATDTSPKQLEFAIKL-----PNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWF---DLPQFYKQVKWVL 76 (213)
Q Consensus 5 ~~~V~gvD~S~~ml~~Ar~~-----~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~---d~~~~~~e~~rvL 76 (213)
..+|+|+|+|+.|++.|++. ++.++.+++. ...++ ++++|+|++.-++|.+ .....+ ++.+.|
T Consensus 126 ~~~y~a~DId~~~i~~ar~~~~~~g~~~~~~v~D~-------~~~~~-~~~~DvvLllk~lh~LE~q~~~~~~-~ll~aL 196 (253)
T 3frh_A 126 IASVWGCDIHQGLGDVITPFAREKDWDFTFALQDV-------LCAPP-AEAGDLALIFKLLPLLEREQAGSAM-ALLQSL 196 (253)
T ss_dssp CSEEEEEESBHHHHHHHHHHHHHTTCEEEEEECCT-------TTSCC-CCBCSEEEEESCHHHHHHHSTTHHH-HHHHHC
T ss_pred CCeEEEEeCCHHHHHHHHHHHHhcCCCceEEEeec-------ccCCC-CCCcchHHHHHHHHHhhhhchhhHH-HHHHHh
Confidence 45899999999999999983 4556777766 44444 4489999999999988 444555 899999
Q ss_pred cCCCeEEEEEe
Q 035840 77 KKPNGVIAAWT 87 (213)
Q Consensus 77 k~pgG~l~~~~ 87 (213)
+ ++|.++-+.
T Consensus 197 ~-~~~vvVsfP 206 (253)
T 3frh_A 197 N-TPRMAVSFP 206 (253)
T ss_dssp B-CSEEEEEEE
T ss_pred c-CCCEEEEcC
Confidence 9 998886554
No 247
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=97.55 E-value=0.00024 Score=59.10 Aligned_cols=73 Identities=15% Similarity=0.104 Sum_probs=56.1
Q ss_pred CeEEEEeCCHHHHHHhhcC-----CCceEEecCCCCcchhhccCCCCCCceeeeeechhhccC-Ch--------------
Q 035840 6 KNVIATDTSPKQLEFAIKL-----PNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWF-DL-------------- 65 (213)
Q Consensus 6 ~~V~gvD~S~~ml~~Ar~~-----~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~-d~-------------- 65 (213)
.+|+|+|+|+.|++.|+.. .++.+..+++ .. +..+.+||+|+++--+++. +.
T Consensus 160 ~~v~GiDi~~~~~~~a~~n~~~~g~~~~i~~~D~-------l~-~~~~~~fD~Ii~NPPfg~~~~~~~~~~~~~~~~~g~ 231 (344)
T 2f8l_A 160 VHASGVDVDDLLISLALVGADLQRQKMTLLHQDG-------LA-NLLVDPVDVVISDLPVGYYPDDENAKTFELCREEGH 231 (344)
T ss_dssp EEEEEEESCHHHHHHHHHHHHHHTCCCEEEESCT-------TS-CCCCCCEEEEEEECCCSEESCHHHHTTSTTCCSSSC
T ss_pred ceEEEEECCHHHHHHHHHHHHhCCCCceEEECCC-------CC-ccccCCccEEEECCCCCCcCchhhhhhccccCCCCc
Confidence 5899999999999999872 2567777776 33 2346789999998777554 21
Q ss_pred ----hHHHHHHHHHhcCCCeEEEEEe
Q 035840 66 ----PQFYKQVKWVLKKPNGVIAAWT 87 (213)
Q Consensus 66 ----~~~~~e~~rvLk~pgG~l~~~~ 87 (213)
..++.++.+.|| |||.+++..
T Consensus 232 ~~~~~~~l~~~~~~Lk-~gG~~~~v~ 256 (344)
T 2f8l_A 232 SFAHFLFIEQGMRYTK-PGGYLFFLV 256 (344)
T ss_dssp EEHHHHHHHHHHHTEE-EEEEEEEEE
T ss_pred chHHHHHHHHHHHHhC-CCCEEEEEE
Confidence 157899999999 999998665
No 248
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=97.48 E-value=0.00029 Score=57.13 Aligned_cols=71 Identities=13% Similarity=0.148 Sum_probs=54.7
Q ss_pred CeEEEEeCCHHHHHHhhcC-------CCceEEecCCCCcchhhccCCCCCCceeeeeechhhccCChhHHHHHHHHHhcC
Q 035840 6 KNVIATDTSPKQLEFAIKL-------PNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWFDLPQFYKQVKWVLKK 78 (213)
Q Consensus 6 ~~V~gvD~S~~ml~~Ar~~-------~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~d~~~~~~e~~rvLk~ 78 (213)
++|+|+|+||.+++.+++. ..+++..+|+ .+++ ..+.||.|++..- .....++..+.++||
T Consensus 149 ~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~-------~~~~-~~~~~D~Vi~~~p---~~~~~~l~~a~~~lk- 216 (278)
T 3k6r_A 149 AKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDN-------RDFP-GENIADRILMGYV---VRTHEFIPKALSIAK- 216 (278)
T ss_dssp CEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCT-------TTCC-CCSCEEEEEECCC---SSGGGGHHHHHHHEE-
T ss_pred CeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcH-------HHhc-cccCCCEEEECCC---CcHHHHHHHHHHHcC-
Confidence 5899999999999999971 4577888887 5553 4577999986532 144578889999999
Q ss_pred CCeEEEEEeC
Q 035840 79 PNGVIAAWTY 88 (213)
Q Consensus 79 pgG~l~~~~~ 88 (213)
|||.+-+.+.
T Consensus 217 ~gG~ih~~~~ 226 (278)
T 3k6r_A 217 DGAIIHYHNT 226 (278)
T ss_dssp EEEEEEEEEE
T ss_pred CCCEEEEEee
Confidence 9999866544
No 249
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=97.46 E-value=0.00033 Score=59.63 Aligned_cols=75 Identities=16% Similarity=0.139 Sum_probs=56.5
Q ss_pred CeEEEEeCCHHHHHHhhcC-------CCceEEecCCCCcchhhccCCCCCCceeeeeec--hhhccC---ChhHHHHHHH
Q 035840 6 KNVIATDTSPKQLEFAIKL-------PNIRYQLTPPTMSITELEQNVATQSSVDLVTIA--AALHWF---DLPQFYKQVK 73 (213)
Q Consensus 6 ~~V~gvD~S~~ml~~Ar~~-------~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~--~~~hw~---d~~~~~~e~~ 73 (213)
.+|+|+|+|+.|++.|++. ..+++.++++ .+++.+ .+||+|+++ +....- +....++++.
T Consensus 264 ~~V~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~-------~~~~~~-~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg 335 (393)
T 3k0b_A 264 LNIIGGDIDARLIEIAKQNAVEAGLGDLITFRQLQV-------ADFQTE-DEYGVVVANPPYGERLEDEEAVRQLYREMG 335 (393)
T ss_dssp CCEEEEESCHHHHHHHHHHHHHTTCTTCSEEEECCG-------GGCCCC-CCSCEEEECCCCCCSHHHHHHHHHHHHHHH
T ss_pred ceEEEEECCHHHHHHHHHHHHHcCCCCceEEEECCh-------HhCCCC-CCCCEEEECCCCccccCCchhHHHHHHHHH
Confidence 4699999999999999972 2478888887 666654 489999988 333221 3456788888
Q ss_pred HHhcCC--CeEEEEEeCC
Q 035840 74 WVLKKP--NGVIAAWTYT 89 (213)
Q Consensus 74 rvLk~p--gG~l~~~~~~ 89 (213)
++|| + ||.+.+.+..
T Consensus 336 ~~lk-~~~g~~~~iit~~ 352 (393)
T 3k0b_A 336 IVYK-RMPTWSVYVLTSY 352 (393)
T ss_dssp HHHH-TCTTCEEEEEECC
T ss_pred HHHh-cCCCCEEEEEECC
Confidence 8888 6 8888877654
No 250
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=97.41 E-value=0.00042 Score=56.55 Aligned_cols=76 Identities=14% Similarity=0.258 Sum_probs=56.7
Q ss_pred CCeEEEEeCCHHHHHHhhcC-----------CCceEEecCCCCcchhhccCCCCCCceeeeeechhhcc-----CChhHH
Q 035840 5 YKNVIATDTSPKQLEFAIKL-----------PNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHW-----FDLPQF 68 (213)
Q Consensus 5 ~~~V~gvD~S~~ml~~Ar~~-----------~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw-----~d~~~~ 68 (213)
..+|+.||+.+.+++.|+++ ++++...+|+- +-+.-..++||+|+.-..=.+ .--..+
T Consensus 107 v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~------~~l~~~~~~yDvIi~D~~dp~~~~~~L~t~eF 180 (294)
T 3o4f_A 107 VESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGV------NFVNQTSQTFDVIISDCTDPIGPGESLFTSAF 180 (294)
T ss_dssp CCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTT------TTTSCSSCCEEEEEESCCCCCCTTCCSSCCHH
T ss_pred cceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHH------HHHhhccccCCEEEEeCCCcCCCchhhcCHHH
Confidence 46899999999999999972 57888888882 333345678999984321111 123578
Q ss_pred HHHHHHHhcCCCeEEEEEe
Q 035840 69 YKQVKWVLKKPNGVIAAWT 87 (213)
Q Consensus 69 ~~e~~rvLk~pgG~l~~~~ 87 (213)
++.+.|+|+ |||.++.+.
T Consensus 181 y~~~~~~L~-p~Gv~v~q~ 198 (294)
T 3o4f_A 181 YEGCKRCLN-PGGIFVAQN 198 (294)
T ss_dssp HHHHHHTEE-EEEEEEEEE
T ss_pred HHHHHHHhC-CCCEEEEec
Confidence 999999999 999998764
No 251
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=97.40 E-value=5.2e-05 Score=60.24 Aligned_cols=75 Identities=12% Similarity=-0.035 Sum_probs=50.4
Q ss_pred cccCCeEEEEeCCHHHHHHhhcC----CCceEEecCCCCcchhhccCCCCC-Cceeeeeechhhc------------cCC
Q 035840 2 AKIYKNVIATDTSPKQLEFAIKL----PNIRYQLTPPTMSITELEQNVATQ-SSVDLVTIAAALH------------WFD 64 (213)
Q Consensus 2 a~~~~~V~gvD~S~~ml~~Ar~~----~~v~~~~~~~~~~~~d~~~~~~~~-~sfDlV~~~~~~h------------w~d 64 (213)
++.+.+|+|+|+|+.|++.|++. +++++..+++ .++++++ ..|+ |+++--.+ |.+
T Consensus 49 ~~~~~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~D~-------~~~~~~~~~~~~-vv~nlPy~~~~~~l~~~l~~~~~ 120 (244)
T 1qam_A 49 VQRCNFVTAIEIDHKLCKTTENKLVDHDNFQVLNKDI-------LQFKFPKNQSYK-IFGNIPYNISTDIIRKIVFDSIA 120 (244)
T ss_dssp HHHSSEEEEECSCHHHHHHHHHHTTTCCSEEEECCCG-------GGCCCCSSCCCE-EEEECCGGGHHHHHHHHHHSCCC
T ss_pred HHcCCeEEEEECCHHHHHHHHHhhccCCCeEEEEChH-------HhCCcccCCCeE-EEEeCCcccCHHHHHHHHhcCCC
Confidence 45678999999999999999873 5788888877 7777764 4564 44443222 223
Q ss_pred hhHHH----HHHHHHhcCCCeEEEE
Q 035840 65 LPQFY----KQVKWVLKKPNGVIAA 85 (213)
Q Consensus 65 ~~~~~----~e~~rvLk~pgG~l~~ 85 (213)
...++ +.+.|+|+ |||.+.+
T Consensus 121 ~~~~lm~q~e~a~rll~-~~G~l~v 144 (244)
T 1qam_A 121 DEIYLIVEYGFAKRLLN-TKRSLAL 144 (244)
T ss_dssp SEEEEEEEHHHHHHHTC-TTSHHHH
T ss_pred CeEEEEEEHHHHHHHhc-CCcchhH
Confidence 33344 34778888 7776543
No 252
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=97.38 E-value=0.00062 Score=57.71 Aligned_cols=75 Identities=9% Similarity=0.044 Sum_probs=57.3
Q ss_pred CeEEEEeCCHHHHHHhhcC-------CCceEEecCCCCcchhhccCCCCCCceeeeeec--hhhccC---ChhHHHHHHH
Q 035840 6 KNVIATDTSPKQLEFAIKL-------PNIRYQLTPPTMSITELEQNVATQSSVDLVTIA--AALHWF---DLPQFYKQVK 73 (213)
Q Consensus 6 ~~V~gvD~S~~ml~~Ar~~-------~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~--~~~hw~---d~~~~~~e~~ 73 (213)
.+|+|+|+|+.|++.|++. ..+++..+++ .+++.+ .+||+|+++ +....- +....++++.
T Consensus 257 ~~v~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~-------~~l~~~-~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg 328 (384)
T 3ldg_A 257 LDISGFDFDGRMVEIARKNAREVGLEDVVKLKQMRL-------QDFKTN-KINGVLISNPPYGERLLDDKAVDILYNEMG 328 (384)
T ss_dssp CCEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCG-------GGCCCC-CCSCEEEECCCCTTTTSCHHHHHHHHHHHH
T ss_pred ceEEEEECCHHHHHHHHHHHHHcCCCCceEEEECCh-------HHCCcc-CCcCEEEECCchhhccCCHHHHHHHHHHHH
Confidence 4699999999999999972 2478888877 666654 489999987 443322 4567888888
Q ss_pred HHhcCC--CeEEEEEeCC
Q 035840 74 WVLKKP--NGVIAAWTYT 89 (213)
Q Consensus 74 rvLk~p--gG~l~~~~~~ 89 (213)
++|| + ||.+++.+..
T Consensus 329 ~~lk-~~~g~~~~iit~~ 345 (384)
T 3ldg_A 329 ETFA-PLKTWSQFILTND 345 (384)
T ss_dssp HHHT-TCTTSEEEEEESC
T ss_pred HHHh-hCCCcEEEEEECC
Confidence 9998 6 9998877664
No 253
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=97.36 E-value=0.00051 Score=55.18 Aligned_cols=74 Identities=11% Similarity=0.128 Sum_probs=57.5
Q ss_pred CCeEEEEeCCHHHHHHhhcC-----CCceEEecCCCCcchhhccCCCCCCceeeeeechhhccCCh---hHHHHHHHHHh
Q 035840 5 YKNVIATDTSPKQLEFAIKL-----PNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWFDL---PQFYKQVKWVL 76 (213)
Q Consensus 5 ~~~V~gvD~S~~ml~~Ar~~-----~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~d~---~~~~~e~~rvL 76 (213)
..+|+|+|+++.|++.+++. .+.++.+.+. .. ..+.+.+|+|+++-++|.++. ...+ ++.+.|
T Consensus 156 ~a~y~a~DId~~~le~a~~~l~~~g~~~~~~v~D~-------~~-~~p~~~~DvaL~lkti~~Le~q~kg~g~-~ll~aL 226 (281)
T 3lcv_B 156 ETVYIASDIDARLVGFVDEALTRLNVPHRTNVADL-------LE-DRLDEPADVTLLLKTLPCLETQQRGSGW-EVIDIV 226 (281)
T ss_dssp TCEEEEEESBHHHHHHHHHHHHHTTCCEEEEECCT-------TT-SCCCSCCSEEEETTCHHHHHHHSTTHHH-HHHHHS
T ss_pred CCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEeee-------cc-cCCCCCcchHHHHHHHHHhhhhhhHHHH-HHHHHh
Confidence 46999999999999999983 3456666654 22 346777999999999999933 2566 999999
Q ss_pred cCCCeEEEEEeC
Q 035840 77 KKPNGVIAAWTY 88 (213)
Q Consensus 77 k~pgG~l~~~~~ 88 (213)
+ |||.|+-+..
T Consensus 227 ~-~~~vvVSfp~ 237 (281)
T 3lcv_B 227 N-SPNIVVTFPT 237 (281)
T ss_dssp S-CSEEEEEEEC
T ss_pred C-CCCEEEeccc
Confidence 9 9999875543
No 254
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=97.31 E-value=0.00019 Score=60.26 Aligned_cols=75 Identities=13% Similarity=0.001 Sum_probs=52.7
Q ss_pred CeEEEEeCCHHHHHHhhcC-C-------------CceEEecCCCCcchhhccCC--C--CCCceeeeeechhh-cc----
Q 035840 6 KNVIATDTSPKQLEFAIKL-P-------------NIRYQLTPPTMSITELEQNV--A--TQSSVDLVTIAAAL-HW---- 62 (213)
Q Consensus 6 ~~V~gvD~S~~ml~~Ar~~-~-------------~v~~~~~~~~~~~~d~~~~~--~--~~~sfDlV~~~~~~-hw---- 62 (213)
.+|++||+++.+++.||++ + ++++..+|+ .++- . .+++||+|++--.- ..
T Consensus 212 ~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da-------~~~L~~~~~~~~~fDvII~D~~d~P~~~~p 284 (364)
T 2qfm_A 212 KMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDC-------IPVLKRYAKEGREFDYVINDLTAVPISTSP 284 (364)
T ss_dssp SEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCH-------HHHHHHHHHHTCCEEEEEEECCSSCCCCC-
T ss_pred CEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcH-------HHHHHhhhccCCCceEEEECCCCcccCcCc
Confidence 6899999999999999973 2 467777777 3321 1 35789999965322 11
Q ss_pred --CChhHHHHHH----HHHhcCCCeEEEEEeC
Q 035840 63 --FDLPQFYKQV----KWVLKKPNGVIAAWTY 88 (213)
Q Consensus 63 --~d~~~~~~e~----~rvLk~pgG~l~~~~~ 88 (213)
.--..+++.+ .++|+ |||.+++.+.
T Consensus 285 ~~L~t~eFy~~~~~~~~~~L~-pgGilv~qs~ 315 (364)
T 2qfm_A 285 EEDSTWEFLRLILDLSMKVLK-QDGKYFTQGN 315 (364)
T ss_dssp ---CHHHHHHHHHHHHHHTEE-EEEEEEEEEE
T ss_pred hhhhHHHHHHHHHHHHHhhCC-CCcEEEEEcC
Confidence 1224666776 89999 9999987643
No 255
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=97.30 E-value=0.00033 Score=55.19 Aligned_cols=74 Identities=14% Similarity=0.069 Sum_probs=54.3
Q ss_pred CeEEEEeCCHHHHHHhhcC-------CCceEEecCCCCcchhhccCCCCCCceeeeeec-hhhccCChhHHHHHHHHHhc
Q 035840 6 KNVIATDTSPKQLEFAIKL-------PNIRYQLTPPTMSITELEQNVATQSSVDLVTIA-AALHWFDLPQFYKQVKWVLK 77 (213)
Q Consensus 6 ~~V~gvD~S~~ml~~Ar~~-------~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~-~~~hw~d~~~~~~e~~rvLk 77 (213)
++|+|+|+|+.+++.|++. .++++..+++ .+...++..||+|+.+ ..-. -....+.+..+.|+
T Consensus 46 ~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~-------l~~~~~~~~~D~IviaGmGg~--lI~~IL~~~~~~l~ 116 (230)
T 3lec_A 46 DFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANG-------LSAFEEADNIDTITICGMGGR--LIADILNNDIDKLQ 116 (230)
T ss_dssp EEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSG-------GGGCCGGGCCCEEEEEEECHH--HHHHHHHHTGGGGT
T ss_pred CEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECch-------hhccccccccCEEEEeCCchH--HHHHHHHHHHHHhC
Confidence 4899999999999999972 3588888887 4443344479998743 2211 24567788888999
Q ss_pred CCCeEEEEEeCC
Q 035840 78 KPNGVIAAWTYT 89 (213)
Q Consensus 78 ~pgG~l~~~~~~ 89 (213)
++|.|.+....
T Consensus 117 -~~~~lIlqp~~ 127 (230)
T 3lec_A 117 -HVKTLVLQPNN 127 (230)
T ss_dssp -TCCEEEEEESS
T ss_pred -cCCEEEEECCC
Confidence 89999887654
No 256
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=97.30 E-value=0.00015 Score=59.37 Aligned_cols=55 Identities=18% Similarity=0.059 Sum_probs=46.7
Q ss_pred cccCCeEEEEeCCHHHHHHhhcC----CCceEEecCCCCcchhhccCCCCCCceeeeeechhhccC
Q 035840 2 AKIYKNVIATDTSPKQLEFAIKL----PNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWF 63 (213)
Q Consensus 2 a~~~~~V~gvD~S~~ml~~Ar~~----~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~ 63 (213)
+...++|+|+|+|+.|++.|++. +++++..+|+ .++++++.+||.|+++..+++.
T Consensus 69 a~~~~~V~aVEid~~li~~a~~~~~~~~~v~vi~gD~-------l~~~~~~~~fD~Iv~NlPy~is 127 (295)
T 3gru_A 69 AKNAKKVYVIEIDKSLEPYANKLKELYNNIEIIWGDA-------LKVDLNKLDFNKVVANLPYQIS 127 (295)
T ss_dssp HHHSSEEEEEESCGGGHHHHHHHHHHCSSEEEEESCT-------TTSCGGGSCCSEEEEECCGGGH
T ss_pred HhcCCEEEEEECCHHHHHHHHHHhccCCCeEEEECch-------hhCCcccCCccEEEEeCccccc
Confidence 45678999999999999999873 7899999988 7777777789999999877764
No 257
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=97.30 E-value=0.00033 Score=53.50 Aligned_cols=62 Identities=15% Similarity=0.115 Sum_probs=47.7
Q ss_pred CCeEEEEeCCHHHHHHhhcCC-----CceEEecCCCCcchhhccCCCCCCceeeeeechhhccCC---hhHHHHHHHHHh
Q 035840 5 YKNVIATDTSPKQLEFAIKLP-----NIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWFD---LPQFYKQVKWVL 76 (213)
Q Consensus 5 ~~~V~gvD~S~~ml~~Ar~~~-----~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~d---~~~~~~e~~rvL 76 (213)
..+|+|+|+|+.|++.|++.. ++++..+++ .+++ ++||+|++.-.+|+.. ....+.++.++|
T Consensus 72 ~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~-------~~~~---~~~D~v~~~~p~~~~~~~~~~~~l~~~~~~l 141 (207)
T 1wy7_A 72 AKEVICVEVDKEAVDVLIENLGEFKGKFKVFIGDV-------SEFN---SRVDIVIMNPPFGSQRKHADRPFLLKAFEIS 141 (207)
T ss_dssp CSEEEEEESCHHHHHHHHHHTGGGTTSEEEEESCG-------GGCC---CCCSEEEECCCCSSSSTTTTHHHHHHHHHHC
T ss_pred CCEEEEEECCHHHHHHHHHHHHHcCCCEEEEECch-------HHcC---CCCCEEEEcCCCccccCCchHHHHHHHHHhc
Confidence 357999999999999999731 678888877 5543 4899999998888762 345667777766
No 258
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=97.22 E-value=0.00075 Score=58.19 Aligned_cols=73 Identities=15% Similarity=0.135 Sum_probs=54.0
Q ss_pred CeEEEEeCCHHHHHHhhcC------C--CceEEecCCCCcchhhccCCCCCCceeeeeechhhc---cCCh---------
Q 035840 6 KNVIATDTSPKQLEFAIKL------P--NIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALH---WFDL--------- 65 (213)
Q Consensus 6 ~~V~gvD~S~~ml~~Ar~~------~--~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~h---w~d~--------- 65 (213)
.+++|+|+++.|++.|+.. . ++.+..+++ ...+.. .+||+|+++--++ +.+.
T Consensus 209 ~~i~G~Ei~~~~~~lA~~nl~l~g~~~~~~~i~~gD~-------l~~~~~-~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~ 280 (445)
T 2okc_A 209 KALHGVDNTPLVVTLASMNLYLHGIGTDRSPIVCEDS-------LEKEPS-TLVDVILANPPFGTRPAGSVDINRPDFYV 280 (445)
T ss_dssp TTEEEEESCHHHHHHHHHHHHHTTCCSSCCSEEECCT-------TTSCCS-SCEEEEEECCCSSCCCTTCCCCCCTTSSS
T ss_pred eEEEEEeCCHHHHHHHHHHHHHhCCCcCCCCEeeCCC-------CCCccc-CCcCEEEECCCCCCcccccchhhHhhcCC
Confidence 5799999999999999861 2 556777766 443333 3799999875543 2222
Q ss_pred ------hHHHHHHHHHhcCCCeEEEEEe
Q 035840 66 ------PQFYKQVKWVLKKPNGVIAAWT 87 (213)
Q Consensus 66 ------~~~~~e~~rvLk~pgG~l~~~~ 87 (213)
..++.++.+.|| |||++++..
T Consensus 281 ~~~~~~~~fl~~~~~~Lk-~gG~~a~V~ 307 (445)
T 2okc_A 281 ETKNNQLNFLQHMMLMLK-TGGRAAVVL 307 (445)
T ss_dssp CCSCHHHHHHHHHHHHEE-EEEEEEEEE
T ss_pred CCcchHHHHHHHHHHHhc-cCCEEEEEE
Confidence 267899999999 999998664
No 259
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=97.17 E-value=0.00061 Score=53.52 Aligned_cols=74 Identities=18% Similarity=0.107 Sum_probs=53.9
Q ss_pred CeEEEEeCCHHHHHHhhcC-------CCceEEecCCCCcchhhccCCCCCC-ceeeeeechhhccCChhHHHHHHHHHhc
Q 035840 6 KNVIATDTSPKQLEFAIKL-------PNIRYQLTPPTMSITELEQNVATQS-SVDLVTIAAALHWFDLPQFYKQVKWVLK 77 (213)
Q Consensus 6 ~~V~gvD~S~~ml~~Ar~~-------~~v~~~~~~~~~~~~d~~~~~~~~~-sfDlV~~~~~~hw~d~~~~~~e~~rvLk 77 (213)
.+|+|+|+|+.+++.|++. .++++..+++ ++.+ +++ .||+|+.+-.-. --....+.+..+.|+
T Consensus 40 ~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~------l~~l--~~~~~~D~IviaG~Gg-~~i~~Il~~~~~~L~ 110 (225)
T 3kr9_A 40 KSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANG------LAAF--EETDQVSVITIAGMGG-RLIARILEEGLGKLA 110 (225)
T ss_dssp EEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSG------GGGC--CGGGCCCEEEEEEECH-HHHHHHHHHTGGGCT
T ss_pred CEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECch------hhhc--ccCcCCCEEEEcCCCh-HHHHHHHHHHHHHhC
Confidence 4899999999999999972 3578888877 2443 333 699888642211 014678888999999
Q ss_pred CCCeEEEEEeCC
Q 035840 78 KPNGVIAAWTYT 89 (213)
Q Consensus 78 ~pgG~l~~~~~~ 89 (213)
|+|+|++....
T Consensus 111 -~~~~lVlq~~~ 121 (225)
T 3kr9_A 111 -NVERLILQPNN 121 (225)
T ss_dssp -TCCEEEEEESS
T ss_pred -CCCEEEEECCC
Confidence 99999876553
No 260
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=97.16 E-value=0.00073 Score=57.30 Aligned_cols=75 Identities=12% Similarity=0.165 Sum_probs=57.1
Q ss_pred CeEEEEeCCHHHHHHhhcC-------CCceEEecCCCCcchhhccCCCCCCceeeeeechhhc--cC---ChhHHHHHHH
Q 035840 6 KNVIATDTSPKQLEFAIKL-------PNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALH--WF---DLPQFYKQVK 73 (213)
Q Consensus 6 ~~V~gvD~S~~ml~~Ar~~-------~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~h--w~---d~~~~~~e~~ 73 (213)
.+|+|+|+|+.|++.|++. .+++|.++++ .+++. +.+||+|+++=-+. .- +....++++.
T Consensus 258 ~~V~GvDid~~ai~~Ar~Na~~~gl~~~i~~~~~D~-------~~l~~-~~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg 329 (385)
T 3ldu_A 258 FKIYGYDIDEESIDIARENAEIAGVDEYIEFNVGDA-------TQFKS-EDEFGFIITNPPYGERLEDKDSVKQLYKELG 329 (385)
T ss_dssp CCEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCG-------GGCCC-SCBSCEEEECCCCCCSHHHHHHHHHHHHHHH
T ss_pred ceEEEEECCHHHHHHHHHHHHHcCCCCceEEEECCh-------hhcCc-CCCCcEEEECCCCcCccCCHHHHHHHHHHHH
Confidence 4799999999999999972 2578888877 66654 35899999854442 21 4567888899
Q ss_pred HHhcCC--CeEEEEEeCC
Q 035840 74 WVLKKP--NGVIAAWTYT 89 (213)
Q Consensus 74 rvLk~p--gG~l~~~~~~ 89 (213)
++|| + ||.+.+.+..
T Consensus 330 ~~lk-~~~g~~~~iit~~ 346 (385)
T 3ldu_A 330 YAFR-KLKNWSYYLITSY 346 (385)
T ss_dssp HHHH-TSBSCEEEEEESC
T ss_pred HHHh-hCCCCEEEEEECC
Confidence 9998 7 8888877654
No 261
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=97.13 E-value=0.00065 Score=53.98 Aligned_cols=75 Identities=12% Similarity=-0.004 Sum_probs=53.7
Q ss_pred CeEEEEeCCHHHHHHhhcC-------CCceEEecCCCCcchhhccCCCCCCceeeeeechhhccCChhHHHHHHHHHhcC
Q 035840 6 KNVIATDTSPKQLEFAIKL-------PNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWFDLPQFYKQVKWVLKK 78 (213)
Q Consensus 6 ~~V~gvD~S~~ml~~Ar~~-------~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~d~~~~~~e~~rvLk~ 78 (213)
.+|+|+|+|+.+++.|++. ..+++..+++ .+...++.+||+|+++-.-- --....+.+..+.|+
T Consensus 46 ~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~-------l~~~~~~~~~D~IviagmGg-~lI~~IL~~~~~~L~- 116 (244)
T 3gnl_A 46 SFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNG-------LAVIEKKDAIDTIVIAGMGG-TLIRTILEEGAAKLA- 116 (244)
T ss_dssp EEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSG-------GGGCCGGGCCCEEEEEEECH-HHHHHHHHHTGGGGT-
T ss_pred CEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecch-------hhccCccccccEEEEeCCch-HHHHHHHHHHHHHhC-
Confidence 4899999999999999972 3478888887 44333333699988532110 024567788889999
Q ss_pred CCeEEEEEeCC
Q 035840 79 PNGVIAAWTYT 89 (213)
Q Consensus 79 pgG~l~~~~~~ 89 (213)
++|+|.+....
T Consensus 117 ~~~~lIlq~~~ 127 (244)
T 3gnl_A 117 GVTKLILQPNI 127 (244)
T ss_dssp TCCEEEEEESS
T ss_pred CCCEEEEEcCC
Confidence 89999887654
No 262
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=96.98 E-value=0.00062 Score=57.85 Aligned_cols=71 Identities=18% Similarity=0.172 Sum_probs=51.9
Q ss_pred CCeEEEEeCCHHHHHHhhcCCCceEEecCCCCcchhhccCCCCCCceeeeeechhh---cc-------CC----------
Q 035840 5 YKNVIATDTSPKQLEFAIKLPNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAAL---HW-------FD---------- 64 (213)
Q Consensus 5 ~~~V~gvD~S~~ml~~Ar~~~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~---hw-------~d---------- 64 (213)
..+|+|+|+++.|++.| .++.+..++. .+++ ++++||+|+++=-+ +. ++
T Consensus 64 ~~~i~gvDi~~~~~~~a---~~~~~~~~D~-------~~~~-~~~~fD~Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~ 132 (421)
T 2ih2_A 64 AYRFVGVEIDPKALDLP---PWAEGILADF-------LLWE-PGEAFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKA 132 (421)
T ss_dssp CSEEEEEESCTTTCCCC---TTEEEEESCG-------GGCC-CSSCEEEEEECCCCCCBSCTTTCSBCCCHHHHHHHHHH
T ss_pred CCeEEEEECCHHHHHhC---CCCcEEeCCh-------hhcC-ccCCCCEEEECcCccCcccccccccccCHHHHHHHHHh
Confidence 36899999999999988 4678888776 5543 35689999985111 11 11
Q ss_pred ----------hhHHHHHHHHHhcCCCeEEEEEe
Q 035840 65 ----------LPQFYKQVKWVLKKPNGVIAAWT 87 (213)
Q Consensus 65 ----------~~~~~~e~~rvLk~pgG~l~~~~ 87 (213)
...++..+.++|+ |||.+++..
T Consensus 133 ~~~~~~~~~~~~~fl~~~~~~Lk-~~G~~~~i~ 164 (421)
T 2ih2_A 133 FSTWKGKYNLYGAFLEKAVRLLK-PGGVLVFVV 164 (421)
T ss_dssp CTTCCTTCCHHHHHHHHHHHHEE-EEEEEEEEE
T ss_pred hhcccCCccHHHHHHHHHHHHhC-CCCEEEEEE
Confidence 1156889999999 999998654
No 263
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=96.80 E-value=0.00074 Score=54.38 Aligned_cols=76 Identities=9% Similarity=-0.083 Sum_probs=51.9
Q ss_pred CeEEEEeCCHHHHHHhhcC----CCceEEecCCCCcchhhccCCCCCCceeeeeechhhc----cCChhHH---HHHHHH
Q 035840 6 KNVIATDTSPKQLEFAIKL----PNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALH----WFDLPQF---YKQVKW 74 (213)
Q Consensus 6 ~~V~gvD~S~~ml~~Ar~~----~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~h----w~d~~~~---~~e~~r 74 (213)
..|+|+|++-++....+.. .++....+++ +...++++.||+|++-.+.+ |.|.... +..+.+
T Consensus 99 ~~v~g~dVGvDl~~~pi~~~~~g~~ii~~~~~~-------dv~~l~~~~~DlVlsD~apnsG~~~~D~~rs~~LL~~a~~ 171 (277)
T 3evf_A 99 SGVKGFTLGRDGHEKPMNVQSLGWNIITFKDKT-------DIHRLEPVKCDTLLCDIGESSSSSVTEGERTVRVLDTVEK 171 (277)
T ss_dssp EEEEEECCCCTTCCCCCCCCBTTGGGEEEECSC-------CTTTSCCCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHH
T ss_pred CcceeEEEeccCcccccccCcCCCCeEEEeccc-------eehhcCCCCccEEEecCccCcCchHHHHHHHHHHHHHHHH
Confidence 4788999986663222221 1445555554 33457788899999888776 7776554 488899
Q ss_pred HhcCCC-eEEEEEeCC
Q 035840 75 VLKKPN-GVIAAWTYT 89 (213)
Q Consensus 75 vLk~pg-G~l~~~~~~ 89 (213)
+|| || |.|++--+.
T Consensus 172 ~Lk-pG~G~FV~KVf~ 186 (277)
T 3evf_A 172 WLA-CGVDNFCVKVLA 186 (277)
T ss_dssp HHT-TCCSEEEEEESC
T ss_pred HhC-CCCCeEEEEecC
Confidence 999 99 999864444
No 264
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=96.66 E-value=0.0066 Score=46.78 Aligned_cols=76 Identities=7% Similarity=-0.034 Sum_probs=51.2
Q ss_pred CCeEEEEeCCHHHHHHhhcC---------CCceEEecCCCCcc--------hhhccCC--------C-CCCceeeeeech
Q 035840 5 YKNVIATDTSPKQLEFAIKL---------PNIRYQLTPPTMSI--------TELEQNV--------A-TQSSVDLVTIAA 58 (213)
Q Consensus 5 ~~~V~gvD~S~~ml~~Ar~~---------~~v~~~~~~~~~~~--------~d~~~~~--------~-~~~sfDlV~~~~ 58 (213)
.++|+.||.++++.+.|++. .++++..+++.... ...+.++ . ..++||+|+.=-
T Consensus 51 ~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~~~~~wg~p~~~~~~~~l~~~~~~i~~~~~~~~fDlIfIDg 130 (202)
T 3cvo_A 51 GKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDIGPTGDWGHPVSDAKWRSYPDYPLAVWRTEGFRHPDVVLVDG 130 (202)
T ss_dssp TCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCSSBCGGGCBSSSTTGGGTTHHHHGGGGCTTCCCCSEEEECS
T ss_pred CCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCchhhhcccccccchhhhhHHHHhhhhhccccCCCCCEEEEeC
Confidence 58999999999999999972 14778888863110 0001111 2 246799999654
Q ss_pred hhccCChhHHHHHHHHHhcCCCeEEEE
Q 035840 59 ALHWFDLPQFYKQVKWVLKKPNGVIAA 85 (213)
Q Consensus 59 ~~hw~d~~~~~~e~~rvLk~pgG~l~~ 85 (213)
.. ....+..+.+.|+ |||.+++
T Consensus 131 ~k----~~~~~~~~l~~l~-~GG~Iv~ 152 (202)
T 3cvo_A 131 RF----RVGCALATAFSIT-RPVTLLF 152 (202)
T ss_dssp SS----HHHHHHHHHHHCS-SCEEEEE
T ss_pred CC----chhHHHHHHHhcC-CCeEEEE
Confidence 32 2366777889999 9999944
No 265
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=96.61 E-value=0.0062 Score=55.56 Aligned_cols=76 Identities=8% Similarity=-0.017 Sum_probs=51.6
Q ss_pred CeEEEEeCCHHHHHHhhcC------C-CceEEecCCCCcchhhccC--CCCCCceeeeeec--hhhccC---ChhHHHH-
Q 035840 6 KNVIATDTSPKQLEFAIKL------P-NIRYQLTPPTMSITELEQN--VATQSSVDLVTIA--AALHWF---DLPQFYK- 70 (213)
Q Consensus 6 ~~V~gvD~S~~ml~~Ar~~------~-~v~~~~~~~~~~~~d~~~~--~~~~~sfDlV~~~--~~~hw~---d~~~~~~- 70 (213)
.+|+|+|+++.|++.|++. . .++|.++++ .++ |..+++||+|+++ +....- +....++
T Consensus 257 ~~i~G~Did~~av~~A~~N~~~agv~~~i~~~~~D~-------~~~~~~~~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly~~ 329 (703)
T 3v97_A 257 SHFYGSDSDARVIQRARTNARLAGIGELITFEVKDV-------AQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSL 329 (703)
T ss_dssp CCEEEEESCHHHHHHHHHHHHHTTCGGGEEEEECCG-------GGCCCSCTTCCCCEEEECCCCCC---CCHHHHHHHHH
T ss_pred ccEEEEECCHHHHHHHHHHHHHcCCCCceEEEECCh-------hhCccccccCCCCEEEeCCCccccccchhHHHHHHHH
Confidence 5899999999999999972 2 367888877 555 3334489999987 444332 2234444
Q ss_pred --HHHHHhcCCCeEEEEEeCC
Q 035840 71 --QVKWVLKKPNGVIAAWTYT 89 (213)
Q Consensus 71 --e~~rvLk~pgG~l~~~~~~ 89 (213)
++.+.+. |||.+++.+..
T Consensus 330 l~~~lk~~~-~g~~~~ilt~~ 349 (703)
T 3v97_A 330 LGRIMKNQF-GGWNLSLFSAS 349 (703)
T ss_dssp HHHHHHHHC-TTCEEEEEESC
T ss_pred HHHHHHhhC-CCCeEEEEeCC
Confidence 4455566 79999877654
No 266
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=96.56 E-value=0.0021 Score=54.54 Aligned_cols=74 Identities=16% Similarity=0.167 Sum_probs=53.0
Q ss_pred CeEEEEeCCHHHHHHhhcC------CC--ceEEecCCCCcchhhccCCCCCCceeeeeechhhccCChhHHHHHHHHHhc
Q 035840 6 KNVIATDTSPKQLEFAIKL------PN--IRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWFDLPQFYKQVKWVLK 77 (213)
Q Consensus 6 ~~V~gvD~S~~ml~~Ar~~------~~--v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~d~~~~~~e~~rvLk 77 (213)
++|+++|+|+..++.+++. .+ +++..+|+. ++-...+ .++||+|++-= +-.....+..+.+.|+
T Consensus 78 ~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~----~~l~~~~-~~~fD~V~lDP---~g~~~~~l~~a~~~Lk 149 (392)
T 3axs_A 78 EKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEAN----FFLRKEW-GFGFDYVDLDP---FGTPVPFIESVALSMK 149 (392)
T ss_dssp EEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHH----HHHHSCC-SSCEEEEEECC---SSCCHHHHHHHHHHEE
T ss_pred CEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHH----HHHHHhh-CCCCcEEEECC---CcCHHHHHHHHHHHhC
Confidence 5899999999999999972 33 777777772 1111011 45799998643 2234578999999999
Q ss_pred CCCeEEEEEeC
Q 035840 78 KPNGVIAAWTY 88 (213)
Q Consensus 78 ~pgG~l~~~~~ 88 (213)
|||.|++.+.
T Consensus 150 -~gGll~~t~t 159 (392)
T 3axs_A 150 -RGGILSLTAT 159 (392)
T ss_dssp -EEEEEEEEEC
T ss_pred -CCCEEEEEec
Confidence 9998887663
No 267
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=96.47 E-value=0.0006 Score=54.64 Aligned_cols=54 Identities=15% Similarity=0.151 Sum_probs=39.3
Q ss_pred cccCCeEEEEeCCH-------HHHHHhhcC-------CCceEEecCCCCcchhhccC-C-CCC--Cceeeeeechhhcc
Q 035840 2 AKIYKNVIATDTSP-------KQLEFAIKL-------PNIRYQLTPPTMSITELEQN-V-ATQ--SSVDLVTIAAALHW 62 (213)
Q Consensus 2 a~~~~~V~gvD~S~-------~ml~~Ar~~-------~~v~~~~~~~~~~~~d~~~~-~-~~~--~sfDlV~~~~~~hw 62 (213)
|..+.+|+|+|+|+ .|++.|++. .++++..+++ ++. + +++ ++||+|++.-.+++
T Consensus 102 A~~g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~-------~~~l~~~~~~~~~fD~V~~dP~~~~ 173 (258)
T 2r6z_A 102 ASLGLTVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNA-------AEQMPALVKTQGKPDIVYLDPMYPE 173 (258)
T ss_dssp HHTTCCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCH-------HHHHHHHHHHHCCCSEEEECCCC--
T ss_pred HHhCCEEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCH-------HHHHHhhhccCCCccEEEECCCCCC
Confidence 55678999999999 999999863 2388999887 332 2 333 68999998655544
No 268
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=96.32 E-value=0.012 Score=48.24 Aligned_cols=45 Identities=13% Similarity=0.078 Sum_probs=34.7
Q ss_pred CCeEEEEeCCHHHHHHhhcC------CCceEEecCCCCcchhhccCCCCC---Cceeeeee
Q 035840 5 YKNVIATDTSPKQLEFAIKL------PNIRYQLTPPTMSITELEQNVATQ---SSVDLVTI 56 (213)
Q Consensus 5 ~~~V~gvD~S~~ml~~Ar~~------~~v~~~~~~~~~~~~d~~~~~~~~---~sfDlV~~ 56 (213)
.++|+|+|+|+.|++.+++. .++++..+++ .+++... .+||.|++
T Consensus 127 ~g~V~a~D~~~~~l~~~~~n~~r~g~~~v~~~~~D~-------~~~~~~~~~~~~fD~Vl~ 180 (309)
T 2b9e_A 127 QGKIFAFDLDAKRLASMATLLARAGVSCCELAEEDF-------LAVSPSDPRYHEVHYILL 180 (309)
T ss_dssp CSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCG-------GGSCTTCGGGTTEEEEEE
T ss_pred CCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeCCh-------HhcCccccccCCCCEEEE
Confidence 36899999999999999872 5788888877 5543322 57999995
No 269
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=96.26 E-value=0.0042 Score=52.47 Aligned_cols=72 Identities=11% Similarity=0.130 Sum_probs=51.5
Q ss_pred CeEEEEeCCHHHHHHhhcC---C---------------C---ceEEecCCCCcchhhccCC-CCCCceeeeeechhhccC
Q 035840 6 KNVIATDTSPKQLEFAIKL---P---------------N---IRYQLTPPTMSITELEQNV-ATQSSVDLVTIAAALHWF 63 (213)
Q Consensus 6 ~~V~gvD~S~~ml~~Ar~~---~---------------~---v~~~~~~~~~~~~d~~~~~-~~~~sfDlV~~~~~~hw~ 63 (213)
.+|+++|+|+.+++.|++. . + +++..+|+ .++. ...++||+|+.. - +.
T Consensus 72 ~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~Da-------~~~~~~~~~~fD~I~lD-P--~~ 141 (378)
T 2dul_A 72 EEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDA-------NRLMAERHRYFHFIDLD-P--FG 141 (378)
T ss_dssp SEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCH-------HHHHHHSTTCEEEEEEC-C--SS
T ss_pred CeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEEcCcH-------HHHHHhccCCCCEEEeC-C--CC
Confidence 5799999999999999962 1 2 55666666 3221 114579999942 1 23
Q ss_pred ChhHHHHHHHHHhcCCCeEEEEEeC
Q 035840 64 DLPQFYKQVKWVLKKPNGVIAAWTY 88 (213)
Q Consensus 64 d~~~~~~e~~rvLk~pgG~l~~~~~ 88 (213)
.....+..+.+.|| |||.|++.+.
T Consensus 142 ~~~~~l~~a~~~lk-~gG~l~vt~t 165 (378)
T 2dul_A 142 SPMEFLDTALRSAK-RRGILGVTAT 165 (378)
T ss_dssp CCHHHHHHHHHHEE-EEEEEEEEEC
T ss_pred CHHHHHHHHHHhcC-CCCEEEEEee
Confidence 45688999999999 9998877653
No 270
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=96.26 E-value=0.0049 Score=49.20 Aligned_cols=50 Identities=16% Similarity=0.054 Sum_probs=37.9
Q ss_pred CcccCCeEEEEeCCHHHHHHhhcC----CCceEEecCCCCcchhhccCCCC----CCceeeeeech
Q 035840 1 LAKIYKNVIATDTSPKQLEFAIKL----PNIRYQLTPPTMSITELEQNVAT----QSSVDLVTIAA 58 (213)
Q Consensus 1 la~~~~~V~gvD~S~~ml~~Ar~~----~~v~~~~~~~~~~~~d~~~~~~~----~~sfDlV~~~~ 58 (213)
|+...++|+|+|+|+.|++.|++. +++++..+|+ .+++++ ++.|| |+++-
T Consensus 47 La~~~~~V~avEid~~~~~~~~~~~~~~~~v~~i~~D~-------~~~~~~~~~~~~~~~-vv~Nl 104 (255)
T 3tqs_A 47 LLTECDNLALVEIDRDLVAFLQKKYNQQKNITIYQNDA-------LQFDFSSVKTDKPLR-VVGNL 104 (255)
T ss_dssp HTTTSSEEEEEECCHHHHHHHHHHHTTCTTEEEEESCT-------TTCCGGGSCCSSCEE-EEEEC
T ss_pred HHHhCCEEEEEECCHHHHHHHHHHHhhCCCcEEEEcch-------HhCCHHHhccCCCeE-EEecC
Confidence 356678999999999999999873 6788999888 555443 35688 55543
No 271
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=96.20 E-value=0.006 Score=53.95 Aligned_cols=75 Identities=15% Similarity=0.162 Sum_probs=52.5
Q ss_pred CeEEEEeCCHHHHHHhhc------CCC-----ceEEecCCCCcchhhccCCCCCCceeeeeechhhc--cC-C-------
Q 035840 6 KNVIATDTSPKQLEFAIK------LPN-----IRYQLTPPTMSITELEQNVATQSSVDLVTIAAALH--WF-D------- 64 (213)
Q Consensus 6 ~~V~gvD~S~~ml~~Ar~------~~~-----v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~h--w~-d------- 64 (213)
.+++|+|+++.|++.|+. ..+ +.+..+++ +...+....+||+|+++=-+. |- +
T Consensus 212 ~~i~GiEid~~~~~lA~~nl~l~gi~~~~~~~~~I~~gDt------L~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~ 285 (541)
T 2ar0_A 212 RAFIGLELVPGTRRLALMNCLLHDIEGNLDHGGAIRLGNT------LGSDGENLPKAHIVATNPPFGSAAGTNITRTFVH 285 (541)
T ss_dssp TSEEEEESCHHHHHHHHHHHHTTTCCCBGGGTBSEEESCT------TSHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSS
T ss_pred ceEEEEcCCHHHHHHHHHHHHHhCCCccccccCCeEeCCC------cccccccccCCeEEEECCCcccccchhhHhhcCC
Confidence 479999999999999986 122 56677765 121123456799999864332 21 1
Q ss_pred -----hhHHHHHHHHHhcCCCeEEEEEe
Q 035840 65 -----LPQFYKQVKWVLKKPNGVIAAWT 87 (213)
Q Consensus 65 -----~~~~~~e~~rvLk~pgG~l~~~~ 87 (213)
-..++..+.+.|| |||++++..
T Consensus 286 ~~~~~~~~Fl~~~l~~Lk-~gGr~a~V~ 312 (541)
T 2ar0_A 286 PTSNKQLCFMQHIIETLH-PGGRAAVVV 312 (541)
T ss_dssp CCSCHHHHHHHHHHHHEE-EEEEEEEEE
T ss_pred CCCchHHHHHHHHHHHhC-CCCEEEEEe
Confidence 1267899999999 999998664
No 272
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=95.99 E-value=0.0043 Score=50.00 Aligned_cols=55 Identities=11% Similarity=-0.002 Sum_probs=42.4
Q ss_pred CcccCCeEEEEeCCHHHHHHhhcC---CCceEEecCCCCcchhhccCCCCCC-ceeeeeechhhcc
Q 035840 1 LAKIYKNVIATDTSPKQLEFAIKL---PNIRYQLTPPTMSITELEQNVATQS-SVDLVTIAAALHW 62 (213)
Q Consensus 1 la~~~~~V~gvD~S~~ml~~Ar~~---~~v~~~~~~~~~~~~d~~~~~~~~~-sfDlV~~~~~~hw 62 (213)
|+...++|+|+|+|+.|++.+++. .++++..+|+ .++++++. .+|.|+++--.+.
T Consensus 64 L~~~~~~V~avEid~~~~~~l~~~~~~~~v~vi~~D~-------l~~~~~~~~~~~~iv~NlPy~i 122 (271)
T 3fut_A 64 LLEAGAEVTAIEKDLRLRPVLEETLSGLPVRLVFQDA-------LLYPWEEVPQGSLLVANLPYHI 122 (271)
T ss_dssp HHHTTCCEEEEESCGGGHHHHHHHTTTSSEEEEESCG-------GGSCGGGSCTTEEEEEEECSSC
T ss_pred HHHcCCEEEEEECCHHHHHHHHHhcCCCCEEEEECCh-------hhCChhhccCccEEEecCcccc
Confidence 355678999999999999999873 4678888877 66666542 5899988876654
No 273
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=95.76 E-value=0.0085 Score=50.51 Aligned_cols=78 Identities=13% Similarity=0.005 Sum_probs=51.5
Q ss_pred CCeEEEEeCCHHHHHHhhcC--------------CCceEEecCCCCcchhh-ccCCCCCCceeeeeechhhccC--C---
Q 035840 5 YKNVIATDTSPKQLEFAIKL--------------PNIRYQLTPPTMSITEL-EQNVATQSSVDLVTIAAALHWF--D--- 64 (213)
Q Consensus 5 ~~~V~gvD~S~~ml~~Ar~~--------------~~v~~~~~~~~~~~~d~-~~~~~~~~sfDlV~~~~~~hw~--d--- 64 (213)
..+|+.||+.|.+++.|+++ ++++...+|+- .+ ++..-..++||+|+.=..-... +
T Consensus 228 ~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~----~fl~~~~~~~~~yDvIIvDl~D~~~s~~p~g 303 (381)
T 3c6k_A 228 PKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCI----PVLKRYAKEGREFDYVINDLTAVPISTSPEE 303 (381)
T ss_dssp CSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHH----HHHHHHHHHTCCEEEEEEECCSSCCCCC---
T ss_pred CceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHH----HHHHhhhhccCceeEEEECCCCCcccCcccC
Confidence 46899999999999999972 23556666651 11 1111234679999954221111 1
Q ss_pred ------hhHHHHHHHHHhcCCCeEEEEEe
Q 035840 65 ------LPQFYKQVKWVLKKPNGVIAAWT 87 (213)
Q Consensus 65 ------~~~~~~e~~rvLk~pgG~l~~~~ 87 (213)
-..+++.+.++|+ |||.++..+
T Consensus 304 ~a~~Lft~eFy~~~~~~L~-p~GVlv~Q~ 331 (381)
T 3c6k_A 304 DSTWEFLRLILDLSMKVLK-QDGKYFTQG 331 (381)
T ss_dssp -CHHHHHHHHHHHHHHTEE-EEEEEEEEE
T ss_pred cchHHHHHHHHHHHHHhcC-CCCEEEEec
Confidence 2467889999999 999997653
No 274
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=95.70 E-value=0.014 Score=49.11 Aligned_cols=67 Identities=10% Similarity=0.012 Sum_probs=51.5
Q ss_pred cccCCeEEEEeCCHHHHHHhhcCCCceEEecCCCCcchhhccCCCCCCceeeeeechhhccCChhHHHHHHHHHhcCCC
Q 035840 2 AKIYKNVIATDTSPKQLEFAIKLPNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWFDLPQFYKQVKWVLKKPN 80 (213)
Q Consensus 2 a~~~~~V~gvD~S~~ml~~Ar~~~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~d~~~~~~e~~rvLk~pg 80 (213)
+.+.++|+|||+++ |-......++|++..+++ .....+.+.||+|+|=++. .+.....-+.+.|. .|
T Consensus 230 ~~rg~~V~aVD~~~-l~~~l~~~~~V~~~~~d~-------~~~~~~~~~~D~vvsDm~~---~p~~~~~l~~~wl~-~~ 296 (375)
T 4auk_A 230 VKRNMWVYSVDNGP-MAQSLMDTGQVTWLREDG-------FKFRPTRSNISWMVCDMVE---KPAKVAALMAQWLV-NG 296 (375)
T ss_dssp HHTTCEEEEECSSC-CCHHHHTTTCEEEECSCT-------TTCCCCSSCEEEEEECCSS---CHHHHHHHHHHHHH-TT
T ss_pred HHCCCEEEEEEhhh-cChhhccCCCeEEEeCcc-------ccccCCCCCcCEEEEcCCC---ChHHhHHHHHHHHh-cc
Confidence 45678999999984 555566678999999888 5555667789999998887 56677777777777 45
No 275
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=95.49 E-value=0.0033 Score=50.33 Aligned_cols=72 Identities=8% Similarity=-0.019 Sum_probs=46.0
Q ss_pred cccCCeEEEEeCCHHHHHHhhc-------C--------CCceEEecCCCCcchhhcc-CCCCCCceeeeeechhhccCCh
Q 035840 2 AKIYKNVIATDTSPKQLEFAIK-------L--------PNIRYQLTPPTMSITELEQ-NVATQSSVDLVTIAAALHWFDL 65 (213)
Q Consensus 2 a~~~~~V~gvD~S~~ml~~Ar~-------~--------~~v~~~~~~~~~~~~d~~~-~~~~~~sfDlV~~~~~~hw~d~ 65 (213)
|..+++|+|+|.|+.+.+.+++ . .++++..+++ .+ ++--+.+||+|++-=.+++-+.
T Consensus 107 A~~g~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~-------~~~L~~~~~~fDvV~lDP~y~~~~~ 179 (258)
T 2oyr_A 107 ASVGCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASS-------LTALTDITPRPQVVYLDPMFPHKQK 179 (258)
T ss_dssp HHHTCCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCH-------HHHSTTCSSCCSEEEECCCCCCCCC
T ss_pred HHcCCEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCH-------HHHHHhCcccCCEEEEcCCCCCccc
Confidence 4557799999999987444332 1 2477888877 33 2311236999998777766544
Q ss_pred hHHHHHHHHHhcCCCe
Q 035840 66 PQFYKQVKWVLKKPNG 81 (213)
Q Consensus 66 ~~~~~e~~rvLk~pgG 81 (213)
..++++..++|+ +.|
T Consensus 180 saavkk~~~~lr-~l~ 194 (258)
T 2oyr_A 180 SALVKKEMRVFQ-SLV 194 (258)
T ss_dssp -----HHHHHHH-HHS
T ss_pred chHHHHHHHHHH-Hhh
Confidence 467788899998 766
No 276
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=95.41 E-value=0.0051 Score=48.97 Aligned_cols=48 Identities=4% Similarity=-0.177 Sum_probs=34.9
Q ss_pred CCe--EEEEeCCHHHHHHhhcC----CCceEEecCCCCcchhhccCCCCC-----Cceeeeeechh
Q 035840 5 YKN--VIATDTSPKQLEFAIKL----PNIRYQLTPPTMSITELEQNVATQ-----SSVDLVTIAAA 59 (213)
Q Consensus 5 ~~~--V~gvD~S~~ml~~Ar~~----~~v~~~~~~~~~~~~d~~~~~~~~-----~sfDlV~~~~~ 59 (213)
.++ |+|+|+|+.|++.|++. +++++..+|+ .++++++ +..|.|+++--
T Consensus 41 ~~~~~v~avEid~~~~~~a~~~~~~~~~v~~i~~D~-------~~~~~~~~~~~~~~~~~vvsNlP 99 (252)
T 1qyr_A 41 ERLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDA-------MTFNFGELAEKMGQPLRVFGNLP 99 (252)
T ss_dssp TTCSCEEEECCCHHHHHHHHTCTTTGGGEEEECSCG-------GGCCHHHHHHHHTSCEEEEEECC
T ss_pred CCCCeEEEEECCHHHHHHHHHHhccCCceEEEECch-------hhCCHHHhhcccCCceEEEECCC
Confidence 456 99999999999999984 3678888877 5555432 23567776654
No 277
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=94.98 E-value=0.005 Score=52.56 Aligned_cols=70 Identities=9% Similarity=-0.079 Sum_probs=46.7
Q ss_pred CcccCCeEEEEeCCHHHHHHhhcC--------CCceEEecCCCCcchhhccC-C-CCCCceeeeeech--------hhcc
Q 035840 1 LAKIYKNVIATDTSPKQLEFAIKL--------PNIRYQLTPPTMSITELEQN-V-ATQSSVDLVTIAA--------ALHW 62 (213)
Q Consensus 1 la~~~~~V~gvD~S~~ml~~Ar~~--------~~v~~~~~~~~~~~~d~~~~-~-~~~~sfDlV~~~~--------~~hw 62 (213)
||+.+.+|+|+|+|+.|++.|++. .++++..+++ .+. + .++++||+|++.= -.+-
T Consensus 111 LA~~g~~V~~VD~s~~~l~~Ar~N~~~~~~gl~~i~~i~~Da-------~~~L~~~~~~~fDvV~lDPPrr~~~~grv~~ 183 (410)
T 3ll7_A 111 LMSKASQGIYIERNDETAVAARHNIPLLLNEGKDVNILTGDF-------KEYLPLIKTFHPDYIYVDPARRSGADKRVYA 183 (410)
T ss_dssp HHTTCSEEEEEESCHHHHHHHHHHHHHHSCTTCEEEEEESCG-------GGSHHHHHHHCCSEEEECCEEC-----CCCC
T ss_pred HHhcCCEEEEEECCHHHHHHHHHhHHHhccCCCcEEEEECcH-------HHhhhhccCCCceEEEECCCCcCCCCceEEe
Confidence 356678999999999999999872 3578888887 432 2 1345799999631 1111
Q ss_pred C-ChhHHHHHHHHHhc
Q 035840 63 F-DLPQFYKQVKWVLK 77 (213)
Q Consensus 63 ~-d~~~~~~e~~rvLk 77 (213)
. |...-+.++.+.|.
T Consensus 184 led~~P~l~~~~~~l~ 199 (410)
T 3ll7_A 184 IADCEPDLIPLATELL 199 (410)
T ss_dssp GGGEESCHHHHHHHHG
T ss_pred hhhcCCCHHHHHHHHH
Confidence 1 44556666666554
No 278
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=94.97 E-value=0.024 Score=45.23 Aligned_cols=38 Identities=18% Similarity=0.267 Sum_probs=26.6
Q ss_pred ceeeeee-chhh--cc-CChhHHHHHHHHHhcCCCeEEEEEeC
Q 035840 50 SVDLVTI-AAAL--HW-FDLPQFYKQVKWVLKKPNGVIAAWTY 88 (213)
Q Consensus 50 sfDlV~~-~~~~--hw-~d~~~~~~e~~rvLk~pgG~l~~~~~ 88 (213)
.||+|+. +++- +. +=-+.++++++|+|| |||+|+.++.
T Consensus 173 ~~D~iflD~fsp~~~p~lw~~~~l~~l~~~L~-pGG~l~tysa 214 (257)
T 2qy6_A 173 KVDAWFLDGFAPAKNPDMWTQNLFNAMARLAR-PGGTLATFTS 214 (257)
T ss_dssp CEEEEEECSSCTTTCGGGCCHHHHHHHHHHEE-EEEEEEESCC
T ss_pred eEEEEEECCCCcccChhhcCHHHHHHHHHHcC-CCcEEEEEeC
Confidence 7999996 2221 11 113578999999999 9999986543
No 279
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=94.80 E-value=0.0069 Score=49.54 Aligned_cols=52 Identities=13% Similarity=0.022 Sum_probs=35.4
Q ss_pred CCeEEEEeCCHHHHHHhhcC-----CCceEEecCCCCcchhhccCCCCCCceeeeeech
Q 035840 5 YKNVIATDTSPKQLEFAIKL-----PNIRYQLTPPTMSITELEQNVATQSSVDLVTIAA 58 (213)
Q Consensus 5 ~~~V~gvD~S~~ml~~Ar~~-----~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~ 58 (213)
..+|+|+|.|+.|++.|++. ++++++.+++..+...+.+ ...++||.|++..
T Consensus 50 ~~~VigvD~d~~al~~A~~~~~~~g~~v~~v~~d~~~l~~~l~~--~g~~~~D~Vl~D~ 106 (301)
T 1m6y_A 50 GCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYREADFLLKT--LGIEKVDGILMDL 106 (301)
T ss_dssp TCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGGGHHHHHHH--TTCSCEEEEEEEC
T ss_pred CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCHHHHHHHHHh--cCCCCCCEEEEcC
Confidence 37999999999999999973 4688888887321100111 1225799999643
No 280
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=94.62 E-value=0.049 Score=48.98 Aligned_cols=68 Identities=15% Similarity=0.179 Sum_probs=49.0
Q ss_pred eEEEEeCCHHHHHHhhcC-------CCceEEecCCCCcchhhccCCCCCCceeeeee---chhhccCChhHHHHHHHHHh
Q 035840 7 NVIATDTSPKQLEFAIKL-------PNIRYQLTPPTMSITELEQNVATQSSVDLVTI---AAALHWFDLPQFYKQVKWVL 76 (213)
Q Consensus 7 ~V~gvD~S~~ml~~Ar~~-------~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~---~~~~hw~d~~~~~~e~~rvL 76 (213)
+|+|||-|+ |...|++. ..|+.+.++. +++.+| ..+|+|++ +..+-.=-...++....|.|
T Consensus 387 kVyAVEknp-~A~~a~~~v~~N~~~dkVtVI~gd~-------eev~LP-EKVDIIVSEwMG~fLl~E~mlevL~Ardr~L 457 (637)
T 4gqb_A 387 KLYAVEKNP-NAVVTLENWQFEEWGSQVTVVSSDM-------REWVAP-EKADIIVSELLGSFADNELSPECLDGAQHFL 457 (637)
T ss_dssp EEEEEESCH-HHHHHHHHHHHHTTGGGEEEEESCT-------TTCCCS-SCEEEEECCCCBTTBGGGCHHHHHHHHGGGE
T ss_pred EEEEEECCH-HHHHHHHHHHhccCCCeEEEEeCcc-------eeccCC-cccCEEEEEcCcccccccCCHHHHHHHHHhc
Confidence 689999997 77777762 4688888887 777665 46999994 22221113446777788999
Q ss_pred cCCCeEEE
Q 035840 77 KKPNGVIA 84 (213)
Q Consensus 77 k~pgG~l~ 84 (213)
| |||.++
T Consensus 458 K-PgGimi 464 (637)
T 4gqb_A 458 K-DDGVSI 464 (637)
T ss_dssp E-EEEEEE
T ss_pred C-CCcEEc
Confidence 9 999875
No 281
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=94.28 E-value=0.013 Score=47.31 Aligned_cols=76 Identities=12% Similarity=-0.083 Sum_probs=50.2
Q ss_pred CeEEEEeCCHHHHHHhhcC----CCceEEecCCCCcchhhccCCCCCCceeeeeechhhc----cCChhH---HHHHHHH
Q 035840 6 KNVIATDTSPKQLEFAIKL----PNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALH----WFDLPQ---FYKQVKW 74 (213)
Q Consensus 6 ~~V~gvD~S~~ml~~Ar~~----~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~h----w~d~~~---~~~e~~r 74 (213)
..|+|+|++.+|...+... .++.+...+++ +. .+++..+|+|+|-.+.+ ++|... .+.-+.+
T Consensus 115 ~sV~GvdvG~d~~~~pi~~~~~g~~ii~~~~~~d-----v~--~l~~~~~DvVLSDmApnsG~~~~D~~rs~~LL~~A~~ 187 (282)
T 3gcz_A 115 KKVMAFTLGVQGHEKPIMRTTLGWNLIRFKDKTD-----VF--NMEVIPGDTLLCDIGESSPSIAVEEQRTLRVLNCAKQ 187 (282)
T ss_dssp EEEEEECCCCTTSCCCCCCCBTTGGGEEEECSCC-----GG--GSCCCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHH
T ss_pred CeeeeEEeccCccccccccccCCCceEEeeCCcc-----hh--hcCCCCcCEEEecCccCCCChHHHHHHHHHHHHHHHH
Confidence 3689999998875555431 13333443332 12 35678899999888876 666554 4666788
Q ss_pred HhcCCC--eEEEEEeCC
Q 035840 75 VLKKPN--GVIAAWTYT 89 (213)
Q Consensus 75 vLk~pg--G~l~~~~~~ 89 (213)
+|| || |.|++=-+.
T Consensus 188 ~Lk-~g~~G~Fv~KvF~ 203 (282)
T 3gcz_A 188 WLQ-EGNYTEFCIKVLC 203 (282)
T ss_dssp HHH-HHCCCEEEEEESC
T ss_pred HcC-CCCCCcEEEEEec
Confidence 999 99 999764444
No 282
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=93.99 E-value=0.018 Score=46.49 Aligned_cols=27 Identities=4% Similarity=-0.068 Sum_probs=24.3
Q ss_pred EEEEeCCHHHHHHhhcC--CCceEEecCC
Q 035840 8 VIATDTSPKQLEFAIKL--PNIRYQLTPP 34 (213)
Q Consensus 8 V~gvD~S~~ml~~Ar~~--~~v~~~~~~~ 34 (213)
|+|+|+|+.|++.|++. ++++++.+|+
T Consensus 71 V~avDid~~~l~~a~~~~~~~v~~i~~D~ 99 (279)
T 3uzu_A 71 LHAVELDRDLIGRLEQRFGELLELHAGDA 99 (279)
T ss_dssp EEEEECCHHHHHHHHHHHGGGEEEEESCG
T ss_pred EEEEECCHHHHHHHHHhcCCCcEEEECCh
Confidence 99999999999999975 6788888887
No 283
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=93.90 E-value=0.032 Score=50.66 Aligned_cols=71 Identities=10% Similarity=0.035 Sum_probs=51.0
Q ss_pred CeEEEEeCCHHHHHHhhc-----C-CCceEEecCCCCcchhhccCCCC-----CCceeeeeechhhccCChh---HHHHH
Q 035840 6 KNVIATDTSPKQLEFAIK-----L-PNIRYQLTPPTMSITELEQNVAT-----QSSVDLVTIAAALHWFDLP---QFYKQ 71 (213)
Q Consensus 6 ~~V~gvD~S~~ml~~Ar~-----~-~~v~~~~~~~~~~~~d~~~~~~~-----~~sfDlV~~~~~~hw~d~~---~~~~e 71 (213)
.+|+|||-|+..+...+. . ..|+++.++. +++.++ +..+|+|++=..=.+.+.+ ..+..
T Consensus 447 ~kVyAVEknp~A~~~l~~~~~Ng~~d~VtVI~gd~-------eev~lp~~~~~~ekVDIIVSElmGsfl~nEL~pe~Ld~ 519 (745)
T 3ua3_A 447 VKLYIVEKNPNAIVTLKYMNVRTWKRRVTIIESDM-------RSLPGIAKDRGFEQPDIIVSELLGSFGDNELSPECLDG 519 (745)
T ss_dssp EEEEEEECCHHHHHHHHHHHHHTTTTCSEEEESCG-------GGHHHHHHHTTCCCCSEEEECCCBTTBGGGSHHHHHHT
T ss_pred cEEEEEeCChHHHHHHHHHHhcCCCCeEEEEeCch-------hhcccccccCCCCcccEEEEeccccccchhccHHHHHH
Confidence 399999999966654443 2 4588888887 666553 5779999975543333444 77888
Q ss_pred HHHHhcCCCeEEE
Q 035840 72 VKWVLKKPNGVIA 84 (213)
Q Consensus 72 ~~rvLk~pgG~l~ 84 (213)
+.|.|| |||.++
T Consensus 520 v~r~Lk-p~Gi~i 531 (745)
T 3ua3_A 520 VTGFLK-PTTISI 531 (745)
T ss_dssp TGGGSC-TTCEEE
T ss_pred HHHhCC-CCcEEE
Confidence 889999 999875
No 284
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=93.62 E-value=0.13 Score=38.67 Aligned_cols=77 Identities=17% Similarity=0.059 Sum_probs=48.1
Q ss_pred cCCeEEEEeCCHHHHHHhhcCCCceEEecCCCCcchhhccCCCCCCceeeeeechhhccCChhHHHHHHHHHhcCCCeEE
Q 035840 4 IYKNVIATDTSPKQLEFAIKLPNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWFDLPQFYKQVKWVLKKPNGVI 83 (213)
Q Consensus 4 ~~~~V~gvD~S~~ml~~Ar~~~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~d~~~~~~e~~rvLk~pgG~l 83 (213)
...+|+++|.+++.++.+++...........+.....+.+. .....+|+|+.+.+ ...+.++.++|+ |||++
T Consensus 62 ~G~~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~-~~~~~~D~vi~~~g------~~~~~~~~~~l~-~~G~~ 133 (198)
T 1pqw_A 62 IGARIYTTAGSDAKREMLSRLGVEYVGDSRSVDFADEILEL-TDGYGVDVVLNSLA------GEAIQRGVQILA-PGGRF 133 (198)
T ss_dssp HTCEEEEEESSHHHHHHHHTTCCSEEEETTCSTHHHHHHHH-TTTCCEEEEEECCC------THHHHHHHHTEE-EEEEE
T ss_pred cCCEEEEEeCCHHHHHHHHHcCCCEEeeCCcHHHHHHHHHH-hCCCCCeEEEECCc------hHHHHHHHHHhc-cCCEE
Confidence 35689999999999988887532111211111111111111 12346999996654 357899999999 99998
Q ss_pred EEEeC
Q 035840 84 AAWTY 88 (213)
Q Consensus 84 ~~~~~ 88 (213)
++...
T Consensus 134 v~~g~ 138 (198)
T 1pqw_A 134 IELGK 138 (198)
T ss_dssp EECSC
T ss_pred EEEcC
Confidence 76644
No 285
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=93.37 E-value=0.081 Score=41.83 Aligned_cols=40 Identities=5% Similarity=-0.027 Sum_probs=31.2
Q ss_pred ccc-CCeEEEEeCCHHHHHHhhcC--CCceEEecCCCCcchhhccCCCCC
Q 035840 2 AKI-YKNVIATDTSPKQLEFAIKL--PNIRYQLTPPTMSITELEQNVATQ 48 (213)
Q Consensus 2 a~~-~~~V~gvD~S~~ml~~Ar~~--~~v~~~~~~~~~~~~d~~~~~~~~ 48 (213)
+.. .++|+|+|+|+.|++.+++. .++++..+|+ .++++++
T Consensus 50 ~~~~~~~v~avEid~~~~~~~~~~~~~~v~~i~~D~-------~~~~~~~ 92 (249)
T 3ftd_A 50 LQHPLKKLYVIELDREMVENLKSIGDERLEVINEDA-------SKFPFCS 92 (249)
T ss_dssp TTSCCSEEEEECCCHHHHHHHTTSCCTTEEEECSCT-------TTCCGGG
T ss_pred HHcCCCeEEEEECCHHHHHHHHhccCCCeEEEEcch-------hhCChhH
Confidence 455 47999999999999999975 4677888877 6666554
No 286
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=93.06 E-value=0.12 Score=45.68 Aligned_cols=75 Identities=15% Similarity=0.289 Sum_probs=49.8
Q ss_pred CeEEEEeCCHHHHHHhhcC---CCce--E--EecCCCCcchhhccCCCCCCceeeeeec--hhh-ccCC-----------
Q 035840 6 KNVIATDTSPKQLEFAIKL---PNIR--Y--QLTPPTMSITELEQNVATQSSVDLVTIA--AAL-HWFD----------- 64 (213)
Q Consensus 6 ~~V~gvD~S~~ml~~Ar~~---~~v~--~--~~~~~~~~~~d~~~~~~~~~sfDlV~~~--~~~-hw~d----------- 64 (213)
..++|+|+++.++..|+.. .++. + ..++. +..-.+.+.+||+|+++ ++. .|-.
T Consensus 284 ~~i~G~Eid~~~~~lA~~Nl~l~gi~~~i~i~~gDt------L~~~~~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~ 357 (544)
T 3khk_A 284 ISVYGQESNPTTWKLAAMNMVIRGIDFNFGKKNADS------FLDDQHPDLRADFVMTNPPFNMKDWWHEKLADDPRWTI 357 (544)
T ss_dssp EEEEECCCCHHHHHHHHHHHHHTTCCCBCCSSSCCT------TTSCSCTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEE
T ss_pred ceEEEEeCCHHHHHHHHHHHHHhCCCcccceeccch------hcCcccccccccEEEECCCcCCccccchhhhhhhhhhc
Confidence 4799999999999999961 2221 2 33332 23323556789999974 222 1321
Q ss_pred -----------h-----hHHHHHHHHHhcCCCeEEEEEe
Q 035840 65 -----------L-----PQFYKQVKWVLKKPNGVIAAWT 87 (213)
Q Consensus 65 -----------~-----~~~~~e~~rvLk~pgG~l~~~~ 87 (213)
+ -.++..+.+.|| |||++++..
T Consensus 358 g~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk-~gGr~aiVl 395 (544)
T 3khk_A 358 NTNGEKRILTPPTGNANFAWMLHMLYHLA-PTGSMALLL 395 (544)
T ss_dssp CCC--CEECCCCTTCTHHHHHHHHHHTEE-EEEEEEEEE
T ss_pred CcccccccccCCCcchhHHHHHHHHHHhc-cCceEEEEe
Confidence 0 147899999999 999998664
No 287
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=92.44 E-value=0.23 Score=41.69 Aligned_cols=79 Identities=15% Similarity=0.070 Sum_probs=51.5
Q ss_pred eEEEEeCCHHHHHHhhcCCCceEEecCCCCc-chhhccCCCCCCceeeeeechhhcc---------CChhHHHHHHHHHh
Q 035840 7 NVIATDTSPKQLEFAIKLPNIRYQLTPPTMS-ITELEQNVATQSSVDLVTIAAALHW---------FDLPQFYKQVKWVL 76 (213)
Q Consensus 7 ~V~gvD~S~~ml~~Ar~~~~v~~~~~~~~~~-~~d~~~~~~~~~sfDlV~~~~~~hw---------~d~~~~~~e~~rvL 76 (213)
+|+++|.|++.++.|++.. +..+....+.. ...+.+. .....+|+|+-+..-.. .++..++.++.++|
T Consensus 212 ~Vi~~~~~~~~~~~a~~lG-a~~i~~~~~~~~~~~~~~~-~~g~g~Dvvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l 289 (398)
T 2dph_A 212 CVIVGDQNPERLKLLSDAG-FETIDLRNSAPLRDQIDQI-LGKPEVDCGVDAVGFEAHGLGDEANTETPNGALNSLFDVV 289 (398)
T ss_dssp EEEEEESCHHHHHHHHTTT-CEEEETTSSSCHHHHHHHH-HSSSCEEEEEECSCTTCBCSGGGTTSBCTTHHHHHHHHHE
T ss_pred EEEEEcCCHHHHHHHHHcC-CcEEcCCCcchHHHHHHHH-hCCCCCCEEEECCCCccccccccccccccHHHHHHHHHHH
Confidence 8999999999999999863 34332222111 1111111 12336999996665443 24567899999999
Q ss_pred cCCCeEEEEEeC
Q 035840 77 KKPNGVIAAWTY 88 (213)
Q Consensus 77 k~pgG~l~~~~~ 88 (213)
+ |||++.+...
T Consensus 290 ~-~gG~iv~~G~ 300 (398)
T 2dph_A 290 R-AGGAIGIPGI 300 (398)
T ss_dssp E-EEEEEECCSC
T ss_pred h-cCCEEEEecc
Confidence 9 9999976654
No 288
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=92.19 E-value=0.099 Score=42.32 Aligned_cols=54 Identities=19% Similarity=0.314 Sum_probs=36.7
Q ss_pred CceEEecCCCCcchhhcc-C-CCCCCceeeeeechhh--------------------ccC-ChhHHHHHHHHHhcCCCeE
Q 035840 26 NIRYQLTPPTMSITELEQ-N-VATQSSVDLVTIAAAL--------------------HWF-DLPQFYKQVKWVLKKPNGV 82 (213)
Q Consensus 26 ~v~~~~~~~~~~~~d~~~-~-~~~~~sfDlV~~~~~~--------------------hw~-d~~~~~~e~~rvLk~pgG~ 82 (213)
.+++.++|+ .+ + .+++++||+|++.==. .|+ .....+.++.|+|| |||.
T Consensus 21 ~~~i~~gD~-------~~~l~~l~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk-~~G~ 92 (297)
T 2zig_A 21 VHRLHVGDA-------REVLASFPEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLV-PGGR 92 (297)
T ss_dssp CEEEEESCH-------HHHHTTSCTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEE-EEEE
T ss_pred CCEEEECcH-------HHHHhhCCCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcC-CCcE
Confidence 456677766 33 2 2578899999953111 133 34567899999999 9999
Q ss_pred EEEEe
Q 035840 83 IAAWT 87 (213)
Q Consensus 83 l~~~~ 87 (213)
+++..
T Consensus 93 l~i~~ 97 (297)
T 2zig_A 93 LVIVV 97 (297)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 97653
No 289
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=91.85 E-value=0.31 Score=40.88 Aligned_cols=79 Identities=15% Similarity=0.043 Sum_probs=52.0
Q ss_pred eEEEEeCCHHHHHHhhcCCCceEEecCCCC-cchhhccCCCCCCceeeeeechh----------hccCChhHHHHHHHHH
Q 035840 7 NVIATDTSPKQLEFAIKLPNIRYQLTPPTM-SITELEQNVATQSSVDLVTIAAA----------LHWFDLPQFYKQVKWV 75 (213)
Q Consensus 7 ~V~gvD~S~~ml~~Ar~~~~v~~~~~~~~~-~~~d~~~~~~~~~sfDlV~~~~~----------~hw~d~~~~~~e~~rv 75 (213)
+|+++|.|++-++.|+++. +..+....+. ....+.+. .....+|+|+-+.+ .|+.++..++.++.++
T Consensus 212 ~Vi~~~~~~~~~~~a~~lG-a~~i~~~~~~~~~~~v~~~-t~g~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (398)
T 1kol_A 212 VVIVGDLNPARLAHAKAQG-FEIADLSLDTPLHEQIAAL-LGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQV 289 (398)
T ss_dssp EEEEEESCHHHHHHHHHTT-CEEEETTSSSCHHHHHHHH-HSSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHH
T ss_pred eEEEEcCCHHHHHHHHHcC-CcEEccCCcchHHHHHHHH-hCCCCCCEEEECCCCcccccccccccccchHHHHHHHHHH
Confidence 7999999999999999873 3433222110 11111111 12346999995444 3455777899999999
Q ss_pred hcCCCeEEEEEeC
Q 035840 76 LKKPNGVIAAWTY 88 (213)
Q Consensus 76 Lk~pgG~l~~~~~ 88 (213)
|+ +||++++...
T Consensus 290 l~-~~G~iv~~G~ 301 (398)
T 1kol_A 290 TR-VAGKIGIPGL 301 (398)
T ss_dssp EE-EEEEEEECSC
T ss_pred Hh-cCCEEEEecc
Confidence 99 9999977654
No 290
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=91.72 E-value=0.096 Score=42.31 Aligned_cols=57 Identities=9% Similarity=0.052 Sum_probs=40.1
Q ss_pred CCceEEecCCCCcchhhccCC-CCCCceeeeeechhhccCChhHHHHHHHHHhcCCCeEEEEEeCC
Q 035840 25 PNIRYQLTPPTMSITELEQNV-ATQSSVDLVTIAAALHWFDLPQFYKQVKWVLKKPNGVIAAWTYT 89 (213)
Q Consensus 25 ~~v~~~~~~~~~~~~d~~~~~-~~~~sfDlV~~~~~~hw~d~~~~~~e~~rvLk~pgG~l~~~~~~ 89 (213)
++++++.|++. +.+| +++++||+|+.=... .-.....+..+.+.|+ |||.+++=++.
T Consensus 189 ~~I~li~Gda~------etL~~~~~~~~d~vfIDaD~-y~~~~~~Le~~~p~L~-pGGiIv~DD~~ 246 (282)
T 2wk1_A 189 EQVRFLPGWFK------DTLPTAPIDTLAVLRMDGDL-YESTWDTLTNLYPKVS-VGGYVIVDDYM 246 (282)
T ss_dssp TTEEEEESCHH------HHSTTCCCCCEEEEEECCCS-HHHHHHHHHHHGGGEE-EEEEEEESSCT
T ss_pred CceEEEEeCHH------HHHhhCCCCCEEEEEEcCCc-cccHHHHHHHHHhhcC-CCEEEEEcCCC
Confidence 57889998873 3343 446789999965431 1134577899999999 99998765653
No 291
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=91.65 E-value=0.67 Score=38.37 Aligned_cols=73 Identities=15% Similarity=0.138 Sum_probs=50.3
Q ss_pred CCeEEEEeCCHHHHHHhhcCCCceEEecCCCCcchhhccCCCCCCceeeeeechhhccCChhHHHHHHHHHhcCCCeEEE
Q 035840 5 YKNVIATDTSPKQLEFAIKLPNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWFDLPQFYKQVKWVLKKPNGVIA 84 (213)
Q Consensus 5 ~~~V~gvD~S~~ml~~Ar~~~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~d~~~~~~e~~rvLk~pgG~l~ 84 (213)
..+|+++|.+++-++.+++.. ........+.....+.++ ..+.+|+|+-+.+ -...+.++.++|+ |||+++
T Consensus 197 g~~Vi~~~~~~~~~~~~~~lG-ad~vi~~~~~~~~~v~~~--~~~g~Dvvid~~g-----~~~~~~~~~~~l~-~~G~iv 267 (363)
T 4dvj_A 197 DLTVIATASRPETQEWVKSLG-AHHVIDHSKPLAAEVAAL--GLGAPAFVFSTTH-----TDKHAAEIADLIA-PQGRFC 267 (363)
T ss_dssp CSEEEEECSSHHHHHHHHHTT-CSEEECTTSCHHHHHHTT--CSCCEEEEEECSC-----HHHHHHHHHHHSC-TTCEEE
T ss_pred CCEEEEEeCCHHHHHHHHHcC-CCEEEeCCCCHHHHHHHh--cCCCceEEEECCC-----chhhHHHHHHHhc-CCCEEE
Confidence 569999999999999999863 332222222222233333 4567999986543 3467899999999 999998
Q ss_pred EE
Q 035840 85 AW 86 (213)
Q Consensus 85 ~~ 86 (213)
+.
T Consensus 268 ~~ 269 (363)
T 4dvj_A 268 LI 269 (363)
T ss_dssp EC
T ss_pred EE
Confidence 65
No 292
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=91.10 E-value=0.38 Score=39.23 Aligned_cols=77 Identities=13% Similarity=0.073 Sum_probs=50.8
Q ss_pred cCCeEEEEeCCHHHHHHhhcCCCceEEecCCCCcchhhccCCCCCCceeeeeechhhccCChhHHHHHHHHHhcCCCeEE
Q 035840 4 IYKNVIATDTSPKQLEFAIKLPNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWFDLPQFYKQVKWVLKKPNGVI 83 (213)
Q Consensus 4 ~~~~V~gvD~S~~ml~~Ar~~~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~d~~~~~~e~~rvLk~pgG~l 83 (213)
...+|+++|.+++.++.+++...........+.....+.+. .....+|+|+-+.+- ..+..+.+.|+ |||++
T Consensus 172 ~Ga~Vi~~~~~~~~~~~~~~~ga~~~~~~~~~~~~~~~~~~-~~~~g~D~vid~~g~------~~~~~~~~~l~-~~G~i 243 (334)
T 3qwb_A 172 KGAHTIAVASTDEKLKIAKEYGAEYLINASKEDILRQVLKF-TNGKGVDASFDSVGK------DTFEISLAALK-RKGVF 243 (334)
T ss_dssp TTCEEEEEESSHHHHHHHHHTTCSEEEETTTSCHHHHHHHH-TTTSCEEEEEECCGG------GGHHHHHHHEE-EEEEE
T ss_pred CCCEEEEEeCCHHHHHHHHHcCCcEEEeCCCchHHHHHHHH-hCCCCceEEEECCCh------HHHHHHHHHhc-cCCEE
Confidence 35699999999999999998643222322221111122222 234569999966553 56888999999 99999
Q ss_pred EEEeC
Q 035840 84 AAWTY 88 (213)
Q Consensus 84 ~~~~~ 88 (213)
.+...
T Consensus 244 v~~G~ 248 (334)
T 3qwb_A 244 VSFGN 248 (334)
T ss_dssp EECCC
T ss_pred EEEcC
Confidence 87654
No 293
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=90.52 E-value=0.15 Score=41.78 Aligned_cols=56 Identities=25% Similarity=0.172 Sum_probs=37.9
Q ss_pred CceEEecCCCCcchhhccCC-CCCCceeeeeec--hhh------------ccC-ChhHHHHHHHHHhcCCCeEEEEEeC
Q 035840 26 NIRYQLTPPTMSITELEQNV-ATQSSVDLVTIA--AAL------------HWF-DLPQFYKQVKWVLKKPNGVIAAWTY 88 (213)
Q Consensus 26 ~v~~~~~~~~~~~~d~~~~~-~~~~sfDlV~~~--~~~------------hw~-d~~~~~~e~~rvLk~pgG~l~~~~~ 88 (213)
...+..+|+. +.+. +++++||+|++. +.. .|. .....+.++.|+|| |||.+++..-
T Consensus 14 ~~~ii~gD~~------~~l~~l~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk-~~G~i~i~~~ 85 (323)
T 1boo_A 14 NGSMYIGDSL------ELLESFPEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLK-PDGSFVVDFG 85 (323)
T ss_dssp SEEEEESCHH------HHGGGSCSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEE-EEEEEEEEEC
T ss_pred CceEEeCcHH------HHHhhCCCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCc-CCcEEEEEEC
Confidence 4556677661 2232 568899999954 111 244 46788999999999 9999987543
No 294
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=90.26 E-value=0.17 Score=41.00 Aligned_cols=76 Identities=9% Similarity=-0.056 Sum_probs=46.3
Q ss_pred CeEEEEeCCHHHHHHhhcC----CCceEEecCCCCcchhhccCCCCCCceeeeeechhhc----cCChh---HHHHHHHH
Q 035840 6 KNVIATDTSPKQLEFAIKL----PNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALH----WFDLP---QFYKQVKW 74 (213)
Q Consensus 6 ~~V~gvD~S~~ml~~Ar~~----~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~h----w~d~~---~~~~e~~r 74 (213)
..|+|+|++..|....+.. .++....... +...+.+..+|+|++-.+-+ .+|.. ..+.-+.+
T Consensus 106 ~sV~Gvdlg~~~~~~P~~~~~~~~~iv~~~~~~-------di~~l~~~~~DlVlsD~APnsG~~~~D~~rs~~LL~~A~~ 178 (300)
T 3eld_A 106 MSVKGYTLGIEGHEKPIHMQTLGWNIVKFKDKS-------NVFTMPTEPSDTLLCDIGESSSNPLVERDRTMKVLENFER 178 (300)
T ss_dssp EEEEEECCCCTTSCCCCCCCBTTGGGEEEECSC-------CTTTSCCCCCSEEEECCCCCCSSHHHHHHHHHHHHHHHHH
T ss_pred ceeeeEEeccccccccccccccCCceEEeecCc-------eeeecCCCCcCEEeecCcCCCCCHHHHHHHHHHHHHHHHH
Confidence 3689999987764332211 1233233332 22235567899999877766 33443 34666788
Q ss_pred HhcCCC-eEEEEEeCC
Q 035840 75 VLKKPN-GVIAAWTYT 89 (213)
Q Consensus 75 vLk~pg-G~l~~~~~~ 89 (213)
+|+ || |.|++=-+.
T Consensus 179 ~Lk-pG~G~FV~KvF~ 193 (300)
T 3eld_A 179 WKH-VNTENFCVKVLA 193 (300)
T ss_dssp HCC-TTCCEEEEEESS
T ss_pred Hhc-CCCCcEEEEecc
Confidence 999 99 999865444
No 295
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=90.14 E-value=0.11 Score=53.76 Aligned_cols=75 Identities=23% Similarity=0.202 Sum_probs=32.8
Q ss_pred CCeEEEEeCCHHHHHHhhcC-C--CceEEecCCCCcchhhcc-CCCCCCceeeeeechhhccC-ChhHHHHHHHHHhcCC
Q 035840 5 YKNVIATDTSPKQLEFAIKL-P--NIRYQLTPPTMSITELEQ-NVATQSSVDLVTIAAALHWF-DLPQFYKQVKWVLKKP 79 (213)
Q Consensus 5 ~~~V~gvD~S~~ml~~Ar~~-~--~v~~~~~~~~~~~~d~~~-~~~~~~sfDlV~~~~~~hw~-d~~~~~~e~~rvLk~p 79 (213)
+.+.+-+|+|+...+.|+++ . .++...-+. ++ .++..++||+|+++..+|=. +....+.++.++|| |
T Consensus 1269 ~~~yt~td~s~~~~~~a~~~f~~~di~~~~~d~-------~~~~~~~~~~ydlvia~~vl~~t~~~~~~l~~~~~lL~-p 1340 (2512)
T 2vz8_A 1269 DLDYTATDRNPQALEAAQAKLEQLHVTQGQWDP-------ANPAPGSLGKADLLVCNCALATLGDPAVAVGNMAATLK-E 1340 (2512)
T ss_dssp EEEEEEECSSSSSTTTTTTTHHHHTEEEECCCS-------SCCCC-----CCEEEEECC---------------------
T ss_pred cceEEEecCChHHHHHHHHHhhhcccccccccc-------cccccCCCCceeEEEEcccccccccHHHHHHHHHHhcC-C
Confidence 45678889998888887764 1 111111111 12 13456779999999999977 88999999999999 9
Q ss_pred CeEEEEEe
Q 035840 80 NGVIAAWT 87 (213)
Q Consensus 80 gG~l~~~~ 87 (213)
||.+.+..
T Consensus 1341 ~G~l~~~e 1348 (2512)
T 2vz8_A 1341 GGFLLLHT 1348 (2512)
T ss_dssp CCEEEEEE
T ss_pred CcEEEEEe
Confidence 99987654
No 296
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=89.81 E-value=1.3 Score=39.07 Aligned_cols=78 Identities=18% Similarity=0.133 Sum_probs=52.5
Q ss_pred CCeEEEEeCCHHHHHHhhcC--------CCceEEecCCCCcchhhc-cCC-CCCCceeeeeec--hhhccC-------Ch
Q 035840 5 YKNVIATDTSPKQLEFAIKL--------PNIRYQLTPPTMSITELE-QNV-ATQSSVDLVTIA--AALHWF-------DL 65 (213)
Q Consensus 5 ~~~V~gvD~S~~ml~~Ar~~--------~~v~~~~~~~~~~~~d~~-~~~-~~~~sfDlV~~~--~~~hw~-------d~ 65 (213)
..+++|+|+++.++..|+.. +++.+..++. +. ++| ..+..||+|+++ ++..|- |.
T Consensus 248 ~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~~~~I~~gDt------L~~d~p~~~~~~fD~IvaNPPf~~~~~~~~~~~~d~ 321 (542)
T 3lkd_A 248 TVVYFGQELNTSTYNLARMNMILHGVPIENQFLHNADT------LDEDWPTQEPTNFDGVLMNPPYSAKWSASSGFMDDP 321 (542)
T ss_dssp TCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCT------TTSCSCCSSCCCBSEEEECCCTTCCCCCCGGGGGST
T ss_pred CceEEEEECcHHHHHHHHHHHHHcCCCcCccceEecce------ecccccccccccccEEEecCCcCCccccchhhhhhh
Confidence 35899999999999999861 2345667665 12 223 456789999965 333341 10
Q ss_pred ---------------hHHHHHHHHHhcCCCeEEEEEeC
Q 035840 66 ---------------PQFYKQVKWVLKKPNGVIAAWTY 88 (213)
Q Consensus 66 ---------------~~~~~e~~rvLk~pgG~l~~~~~ 88 (213)
-.++..+.+.||+|||++++...
T Consensus 322 rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~a~VlP 359 (542)
T 3lkd_A 322 RFSPFGKLAPKSKADFAFLLHGYYHLKQDNGVMAIVLP 359 (542)
T ss_dssp TTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCEEEEEEE
T ss_pred hhhhhhhcCCCchhhHHHHHHHHHHhCCCceeEEEEec
Confidence 13688999999823999986643
No 297
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=89.54 E-value=0.37 Score=40.25 Aligned_cols=81 Identities=19% Similarity=0.099 Sum_probs=50.1
Q ss_pred CeEEEEeCCHHHHHHhhcC------------CCceEEecCCCCcchhhccCC-CCCCceeeeee---chhh-c-------
Q 035840 6 KNVIATDTSPKQLEFAIKL------------PNIRYQLTPPTMSITELEQNV-ATQSSVDLVTI---AAAL-H------- 61 (213)
Q Consensus 6 ~~V~gvD~S~~ml~~Ar~~------------~~v~~~~~~~~~~~~d~~~~~-~~~~sfDlV~~---~~~~-h------- 61 (213)
+.|+++|+|+.-++..++. .++.....++ ..++ ...++||.|.+ |.+- +
T Consensus 173 ~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~-------~~~~~~~~~~fD~VLlDaPCSg~g~g~~r~~~ 245 (359)
T 4fzv_A 173 RNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDG-------RKWGELEGDTYDRVLVDVPCTTDRHSLHEEEN 245 (359)
T ss_dssp EEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCG-------GGHHHHSTTCEEEEEEECCCCCHHHHTTCCTT
T ss_pred CcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCch-------hhcchhccccCCEEEECCccCCCCCcccccCh
Confidence 4799999999888776641 2455566665 3332 35678999992 2221 1
Q ss_pred ---cC-Ch----------hHHHHHHHHHhcCCCeEEEEE-eCCCCCcC
Q 035840 62 ---WF-DL----------PQFYKQVKWVLKKPNGVIAAW-TYTMPEIN 94 (213)
Q Consensus 62 ---w~-d~----------~~~~~e~~rvLk~pgG~l~~~-~~~~~~~~ 94 (213)
|- .. .+.+..+.+.|| |||.|+.. |.-.+.-+
T Consensus 246 ~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lk-pGG~LVYsTCSl~~~EN 292 (359)
T 4fzv_A 246 NIFKRSRKKERQILPVLQVQLLAAGLLATK-PGGHVVYSTCSLSHLQN 292 (359)
T ss_dssp CTTSGGGHHHHHTHHHHHHHHHHHHHHTEE-EEEEEEEEESCCCTTTT
T ss_pred hhhhhCCHHHHHHHHHHHHHHHHHHHhcCC-CCcEEEEEeCCCchhhC
Confidence 11 11 256778889999 99998744 44444433
No 298
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=89.39 E-value=0.57 Score=38.78 Aligned_cols=75 Identities=21% Similarity=0.182 Sum_probs=48.5
Q ss_pred eEEEEeCCHHHHHHhhcCCCceEEecCCCCcchhhccCCCCCCceeeeeechhhccCChhHHHHHHHHHhcCCCeEEEEE
Q 035840 7 NVIATDTSPKQLEFAIKLPNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWFDLPQFYKQVKWVLKKPNGVIAAW 86 (213)
Q Consensus 7 ~V~gvD~S~~ml~~Ar~~~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~d~~~~~~e~~rvLk~pgG~l~~~ 86 (213)
+|+++|.|++.++.|++..-........+.....+.+. .++.+|+|+-+.+ ....+.++.+.|+ |||++++.
T Consensus 217 ~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~~--~~gg~D~vid~~g-----~~~~~~~~~~~l~-~~G~iv~~ 288 (371)
T 1f8f_A 217 IIIAVDIVESRLELAKQLGATHVINSKTQDPVAAIKEI--TDGGVNFALESTG-----SPEILKQGVDALG-ILGKIAVV 288 (371)
T ss_dssp EEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHH--TTSCEEEEEECSC-----CHHHHHHHHHTEE-EEEEEEEC
T ss_pred eEEEECCCHHHHHHHHHcCCCEEecCCccCHHHHHHHh--cCCCCcEEEECCC-----CHHHHHHHHHHHh-cCCEEEEe
Confidence 69999999999999987632222222221111112222 2236999985554 2467899999999 99999876
Q ss_pred eCC
Q 035840 87 TYT 89 (213)
Q Consensus 87 ~~~ 89 (213)
...
T Consensus 289 G~~ 291 (371)
T 1f8f_A 289 GAP 291 (371)
T ss_dssp CCC
T ss_pred CCC
Confidence 543
No 299
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=89.10 E-value=0.49 Score=39.17 Aligned_cols=78 Identities=17% Similarity=0.032 Sum_probs=50.4
Q ss_pred cCCeEEEEeCCHHHHHHhhcCCCceEEecCCCCcchhhccCCCCCCceeeeeechhhccCChhHHHHHHHHHhcCCCeEE
Q 035840 4 IYKNVIATDTSPKQLEFAIKLPNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWFDLPQFYKQVKWVLKKPNGVI 83 (213)
Q Consensus 4 ~~~~V~gvD~S~~ml~~Ar~~~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~d~~~~~~e~~rvLk~pgG~l 83 (213)
..++|+++|.|++-++.+++..-......+.+.....+.+. .....+|+|+-+.+ ...+.++.++|+ |||++
T Consensus 212 ~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~-~~g~g~D~vid~~g------~~~~~~~~~~l~-~~G~i 283 (363)
T 3uog_A 212 TGAEVIVTSSSREKLDRAFALGADHGINRLEEDWVERVYAL-TGDRGADHILEIAG------GAGLGQSLKAVA-PDGRI 283 (363)
T ss_dssp TTCEEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHH-HTTCCEEEEEEETT------SSCHHHHHHHEE-EEEEE
T ss_pred cCCEEEEEecCchhHHHHHHcCCCEEEcCCcccHHHHHHHH-hCCCCceEEEECCC------hHHHHHHHHHhh-cCCEE
Confidence 35699999999999999988632222222211111112221 13346999996655 246788999999 99999
Q ss_pred EEEeCC
Q 035840 84 AAWTYT 89 (213)
Q Consensus 84 ~~~~~~ 89 (213)
++....
T Consensus 284 v~~G~~ 289 (363)
T 3uog_A 284 SVIGVL 289 (363)
T ss_dssp EEECCC
T ss_pred EEEecC
Confidence 877543
No 300
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=88.92 E-value=0.6 Score=37.98 Aligned_cols=75 Identities=13% Similarity=0.064 Sum_probs=48.8
Q ss_pred cCCeEEEEeCCHHHHHHhhcCCCceEEe--cCCCCcchhhccCCCCCCceeeeeechhhccCChhHHHHHHHHHhcCCCe
Q 035840 4 IYKNVIATDTSPKQLEFAIKLPNIRYQL--TPPTMSITELEQNVATQSSVDLVTIAAALHWFDLPQFYKQVKWVLKKPNG 81 (213)
Q Consensus 4 ~~~~V~gvD~S~~ml~~Ar~~~~v~~~~--~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~d~~~~~~e~~rvLk~pgG 81 (213)
...+|+++|.+++.++.+++.. ..... .+.+.....+.+.. .+.+|+|+.+.+- ..+.++.+.|+ |||
T Consensus 169 ~G~~V~~~~~~~~~~~~~~~~g-~~~~~d~~~~~~~~~~~~~~~--~~~~d~vi~~~g~------~~~~~~~~~l~-~~G 238 (333)
T 1v3u_A 169 KGCKVVGAAGSDEKIAYLKQIG-FDAAFNYKTVNSLEEALKKAS--PDGYDCYFDNVGG------EFLNTVLSQMK-DFG 238 (333)
T ss_dssp TTCEEEEEESSHHHHHHHHHTT-CSEEEETTSCSCHHHHHHHHC--TTCEEEEEESSCH------HHHHHHHTTEE-EEE
T ss_pred CCCEEEEEeCCHHHHHHHHhcC-CcEEEecCCHHHHHHHHHHHh--CCCCeEEEECCCh------HHHHHHHHHHh-cCC
Confidence 4569999999999999987653 22221 12111111222221 2479999977663 45889999999 999
Q ss_pred EEEEEeC
Q 035840 82 VIAAWTY 88 (213)
Q Consensus 82 ~l~~~~~ 88 (213)
++.+...
T Consensus 239 ~~v~~g~ 245 (333)
T 1v3u_A 239 KIAICGA 245 (333)
T ss_dssp EEEECCC
T ss_pred EEEEEec
Confidence 9987654
No 301
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=88.83 E-value=0.76 Score=37.51 Aligned_cols=76 Identities=20% Similarity=0.128 Sum_probs=49.3
Q ss_pred CCeEEEEeCCHHHHHHhhcCCCceEEecCCCCcchhhccCCCCCCceeeeeechhhccCChhHHHHHHHHHhcCCCeEEE
Q 035840 5 YKNVIATDTSPKQLEFAIKLPNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWFDLPQFYKQVKWVLKKPNGVIA 84 (213)
Q Consensus 5 ~~~V~gvD~S~~ml~~Ar~~~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~d~~~~~~e~~rvLk~pgG~l~ 84 (213)
..+|+++|.|++.++.+++..-........+.....+.+ ..+.+|+|+-+.. -...+.++.++|+ |||++.
T Consensus 190 Ga~Vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~---~~g~~d~vid~~g-----~~~~~~~~~~~l~-~~G~iv 260 (340)
T 3s2e_A 190 GLRVAAVDIDDAKLNLARRLGAEVAVNARDTDPAAWLQK---EIGGAHGVLVTAV-----SPKAFSQAIGMVR-RGGTIA 260 (340)
T ss_dssp TCEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHH---HHSSEEEEEESSC-----CHHHHHHHHHHEE-EEEEEE
T ss_pred CCeEEEEeCCHHHHHHHHHcCCCEEEeCCCcCHHHHHHH---hCCCCCEEEEeCC-----CHHHHHHHHHHhc-cCCEEE
Confidence 569999999999999999874222222222111111121 1125898875432 3568899999999 999998
Q ss_pred EEeCC
Q 035840 85 AWTYT 89 (213)
Q Consensus 85 ~~~~~ 89 (213)
+....
T Consensus 261 ~~G~~ 265 (340)
T 3s2e_A 261 LNGLP 265 (340)
T ss_dssp ECSCC
T ss_pred EeCCC
Confidence 76543
No 302
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=88.76 E-value=0.64 Score=37.83 Aligned_cols=76 Identities=9% Similarity=-0.073 Sum_probs=49.7
Q ss_pred cCCeEEEEeCCHHHHHHh-hcCCCceEEecCCCCcchhhccCCCCCCceeeeeechhhccCChhHHHHHHHHHhcCCCeE
Q 035840 4 IYKNVIATDTSPKQLEFA-IKLPNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWFDLPQFYKQVKWVLKKPNGV 82 (213)
Q Consensus 4 ~~~~V~gvD~S~~ml~~A-r~~~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~d~~~~~~e~~rvLk~pgG~ 82 (213)
...+|+++|.|++-++.+ ++..-........+.....+.+.. .+.+|+|+-+.+- ..+..+.+.|+ |||+
T Consensus 173 ~Ga~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--~~~~d~vi~~~g~------~~~~~~~~~l~-~~G~ 243 (336)
T 4b7c_A 173 KGCRVVGIAGGAEKCRFLVEELGFDGAIDYKNEDLAAGLKREC--PKGIDVFFDNVGG------EILDTVLTRIA-FKAR 243 (336)
T ss_dssp TTCEEEEEESSHHHHHHHHHTTCCSEEEETTTSCHHHHHHHHC--TTCEEEEEESSCH------HHHHHHHTTEE-EEEE
T ss_pred CCCEEEEEeCCHHHHHHHHHHcCCCEEEECCCHHHHHHHHHhc--CCCceEEEECCCc------chHHHHHHHHh-hCCE
Confidence 456999999999999998 665322222222221222222222 3569999876553 47899999999 9999
Q ss_pred EEEEeC
Q 035840 83 IAAWTY 88 (213)
Q Consensus 83 l~~~~~ 88 (213)
+.+...
T Consensus 244 iv~~G~ 249 (336)
T 4b7c_A 244 IVLCGA 249 (336)
T ss_dssp EEECCC
T ss_pred EEEEee
Confidence 987654
No 303
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=88.72 E-value=1.1 Score=41.62 Aligned_cols=76 Identities=14% Similarity=0.072 Sum_probs=46.9
Q ss_pred CeEEEEeCCHHHHHHh--hc---C----CCc---eEEecCCCCcchhhccC-CCCCCceeeeeechhh--ccC-------
Q 035840 6 KNVIATDTSPKQLEFA--IK---L----PNI---RYQLTPPTMSITELEQN-VATQSSVDLVTIAAAL--HWF------- 63 (213)
Q Consensus 6 ~~V~gvD~S~~ml~~A--r~---~----~~v---~~~~~~~~~~~~d~~~~-~~~~~sfDlV~~~~~~--hw~------- 63 (213)
.+++|+|+++.+++.| |. . .++ .+...+ +... +.....||+|+++==+ .+-
T Consensus 349 ~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD-------~L~~~~~~~~kFDVVIgNPPYg~~~~~~~e~kd 421 (878)
T 3s1s_A 349 RQIWANDIETLFLELLSIRLGLLFPQLVSSNNAPTITGED-------VCSLNPEDFANVSVVVMNPPYVSGVTDPAIKRK 421 (878)
T ss_dssp GGEEEECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEECCC-------GGGCCGGGGTTEEEEEECCBCCSSCCCHHHHHH
T ss_pred CeEEEEECCHHHHHHHHHHHHHHHhhhhcCCCcceEEecc-------hhcccccccCCCCEEEECCCccccccchhhhhh
Confidence 4799999999999999 42 1 111 222222 2331 2345679999963222 111
Q ss_pred --------------------C-hhHHHHHHHHHhcCCCeEEEEEeCC
Q 035840 64 --------------------D-LPQFYKQVKWVLKKPNGVIAAWTYT 89 (213)
Q Consensus 64 --------------------d-~~~~~~e~~rvLk~pgG~l~~~~~~ 89 (213)
| ...++..+.+.|+ |||+++++...
T Consensus 422 ~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLK-pGGrLAfIlP~ 467 (878)
T 3s1s_A 422 FAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQ-DGTVISAIMPK 467 (878)
T ss_dssp HHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSC-TTCEEEEEEET
T ss_pred HHHHhhhhccccccccccccchHHHHHHHHHHhcC-CCcEEEEEECh
Confidence 1 1235688999999 99999876543
No 304
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=88.62 E-value=0.45 Score=38.39 Aligned_cols=51 Identities=20% Similarity=0.101 Sum_probs=36.3
Q ss_pred CCeEEEEeCCHHHHHHhhcC--CCceEEecCCCCcchhhccCCCCCCceeeeeec
Q 035840 5 YKNVIATDTSPKQLEFAIKL--PNIRYQLTPPTMSITELEQNVATQSSVDLVTIA 57 (213)
Q Consensus 5 ~~~V~gvD~S~~ml~~Ar~~--~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~ 57 (213)
.++|+|+|.+|.+++.|++. ++++++.++.+.+..-+.+. +.++||.|++.
T Consensus 44 ~g~VigiD~Dp~Ai~~A~~L~~~rv~lv~~~f~~l~~~L~~~--g~~~vDgIL~D 96 (285)
T 1wg8_A 44 GGRVIGLDQDPEAVARAKGLHLPGLTVVQGNFRHLKRHLAAL--GVERVDGILAD 96 (285)
T ss_dssp TCEEEEEESCHHHHHHHHHTCCTTEEEEESCGGGHHHHHHHT--TCSCEEEEEEE
T ss_pred CCEEEEEeCCHHHHHHHHhhccCCEEEEECCcchHHHHHHHc--CCCCcCEEEeC
Confidence 57999999999999999874 36788888774332223332 33579999953
No 305
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=88.56 E-value=0.65 Score=37.70 Aligned_cols=78 Identities=12% Similarity=0.064 Sum_probs=50.6
Q ss_pred cCCeEEEEeCCHHHHHHhhcCCCceEEecCCCCcchhhccCCCCCCceeeeeechhhccCChhHHHHHHHHHhcCCCeEE
Q 035840 4 IYKNVIATDTSPKQLEFAIKLPNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWFDLPQFYKQVKWVLKKPNGVI 83 (213)
Q Consensus 4 ~~~~V~gvD~S~~ml~~Ar~~~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~d~~~~~~e~~rvLk~pgG~l 83 (213)
...+|+++|.|++-++.+++...........+.....+.+. .....+|+|+-+.+- ..+..+.++|+ |||++
T Consensus 164 ~Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~-~~~~g~Dvvid~~g~------~~~~~~~~~l~-~~G~i 235 (325)
T 3jyn_A 164 LGAKLIGTVSSPEKAAHAKALGAWETIDYSHEDVAKRVLEL-TDGKKCPVVYDGVGQ------DTWLTSLDSVA-PRGLV 235 (325)
T ss_dssp HTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHH-TTTCCEEEEEESSCG------GGHHHHHTTEE-EEEEE
T ss_pred CCCEEEEEeCCHHHHHHHHHcCCCEEEeCCCccHHHHHHHH-hCCCCceEEEECCCh------HHHHHHHHHhc-CCCEE
Confidence 35699999999999999987532222222221111112221 234569999976553 46788999999 99999
Q ss_pred EEEeCC
Q 035840 84 AAWTYT 89 (213)
Q Consensus 84 ~~~~~~ 89 (213)
.+....
T Consensus 236 v~~g~~ 241 (325)
T 3jyn_A 236 VSFGNA 241 (325)
T ss_dssp EECCCT
T ss_pred EEEecC
Confidence 877543
No 306
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=88.43 E-value=0.38 Score=39.65 Aligned_cols=76 Identities=14% Similarity=0.115 Sum_probs=49.8
Q ss_pred cCCeEEEEeCCHHHHHHhhcCCCceEEecCCCCcchhhccCCCCCCceeeeeechhhccCChhHHHHHHHHHhcCCCeEE
Q 035840 4 IYKNVIATDTSPKQLEFAIKLPNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWFDLPQFYKQVKWVLKKPNGVI 83 (213)
Q Consensus 4 ~~~~V~gvD~S~~ml~~Ar~~~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~d~~~~~~e~~rvLk~pgG~l 83 (213)
...+|+++|.|++.++.+++...........+.....+.+.. .+.+|+|+-+.+- ..+..+.+.|+ |||++
T Consensus 191 ~Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~~~~~~--~~g~Dvvid~~g~------~~~~~~~~~l~-~~G~i 261 (353)
T 4dup_A 191 FGAEVYATAGSTGKCEACERLGAKRGINYRSEDFAAVIKAET--GQGVDIILDMIGA------AYFERNIASLA-KDGCL 261 (353)
T ss_dssp TTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHH--SSCEEEEEESCCG------GGHHHHHHTEE-EEEEE
T ss_pred cCCEEEEEeCCHHHHHHHHhcCCCEEEeCCchHHHHHHHHHh--CCCceEEEECCCH------HHHHHHHHHhc-cCCEE
Confidence 356999999999999999875322222222211111222222 4569999966553 36788999999 99999
Q ss_pred EEEeC
Q 035840 84 AAWTY 88 (213)
Q Consensus 84 ~~~~~ 88 (213)
.+...
T Consensus 262 v~~g~ 266 (353)
T 4dup_A 262 SIIAF 266 (353)
T ss_dssp EECCC
T ss_pred EEEEe
Confidence 87654
No 307
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=88.26 E-value=0.5 Score=38.36 Aligned_cols=77 Identities=12% Similarity=0.097 Sum_probs=48.7
Q ss_pred cCCeEEEEeCCHHHHHHhhcCCCceEEecCCCCcchhhccCCCCCCceeeeeechhhccCChhHHHHHHHHHhcCCCeEE
Q 035840 4 IYKNVIATDTSPKQLEFAIKLPNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWFDLPQFYKQVKWVLKKPNGVI 83 (213)
Q Consensus 4 ~~~~V~gvD~S~~ml~~Ar~~~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~d~~~~~~e~~rvLk~pgG~l 83 (213)
...+|+++|.+++.++.+++...........+.....+.+. .....+|+|+.+.+ ...+.++.++|+ +||++
T Consensus 164 ~G~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~D~vi~~~g------~~~~~~~~~~l~-~~G~i 235 (327)
T 1qor_A 164 LGAKLIGTVGTAQKAQSALKAGAWQVINYREEDLVERLKEI-TGGKKVRVVYDSVG------RDTWERSLDCLQ-RRGLM 235 (327)
T ss_dssp HTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHH-TTTCCEEEEEECSC------GGGHHHHHHTEE-EEEEE
T ss_pred cCCEEEEEeCCHHHHHHHHHcCCCEEEECCCccHHHHHHHH-hCCCCceEEEECCc------hHHHHHHHHHhc-CCCEE
Confidence 45699999999999999887422112221111111111111 12346999997665 367899999999 99999
Q ss_pred EEEeC
Q 035840 84 AAWTY 88 (213)
Q Consensus 84 ~~~~~ 88 (213)
++...
T Consensus 236 v~~g~ 240 (327)
T 1qor_A 236 VSFGN 240 (327)
T ss_dssp EECCC
T ss_pred EEEec
Confidence 87654
No 308
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=88.18 E-value=0.73 Score=37.95 Aligned_cols=77 Identities=8% Similarity=0.012 Sum_probs=48.7
Q ss_pred cCCeEEEEeCCHHHHHHhhcCCCceEEecCCCCcchhhccCCCCCCceeeeeechhhccCChhHHHHHHHHHhcCCCeEE
Q 035840 4 IYKNVIATDTSPKQLEFAIKLPNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWFDLPQFYKQVKWVLKKPNGVI 83 (213)
Q Consensus 4 ~~~~V~gvD~S~~ml~~Ar~~~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~d~~~~~~e~~rvLk~pgG~l 83 (213)
...+|+++|.|++.++.+++...........+.....+.+. .....+|+|+-+.+- ..+.++.++|+ |||++
T Consensus 194 ~Ga~Vi~~~~~~~~~~~~~~~ga~~~~d~~~~~~~~~~~~~-~~~~~~D~vi~~~G~------~~~~~~~~~l~-~~G~i 265 (351)
T 1yb5_A 194 YGLKILGTAGTEEGQKIVLQNGAHEVFNHREVNYIDKIKKY-VGEKGIDIIIEMLAN------VNLSKDLSLLS-HGGRV 265 (351)
T ss_dssp TTCEEEEEESSHHHHHHHHHTTCSEEEETTSTTHHHHHHHH-HCTTCEEEEEESCHH------HHHHHHHHHEE-EEEEE
T ss_pred CCCEEEEEeCChhHHHHHHHcCCCEEEeCCCchHHHHHHHH-cCCCCcEEEEECCCh------HHHHHHHHhcc-CCCEE
Confidence 45689999999999999887632122221111111111111 123469999976653 46788999999 99999
Q ss_pred EEEeC
Q 035840 84 AAWTY 88 (213)
Q Consensus 84 ~~~~~ 88 (213)
++...
T Consensus 266 v~~g~ 270 (351)
T 1yb5_A 266 IVVGS 270 (351)
T ss_dssp EECCC
T ss_pred EEEec
Confidence 87654
No 309
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=88.12 E-value=0.61 Score=38.18 Aligned_cols=73 Identities=16% Similarity=0.125 Sum_probs=47.7
Q ss_pred eEEEEeCCHHHHHHhhcCCCceEEecCCCCcchhhccCCCCCCceeeeeechhhccCChhHHHHHHHHHhcCCCeEEEEE
Q 035840 7 NVIATDTSPKQLEFAIKLPNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWFDLPQFYKQVKWVLKKPNGVIAAW 86 (213)
Q Consensus 7 ~V~gvD~S~~ml~~Ar~~~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~d~~~~~~e~~rvLk~pgG~l~~~ 86 (213)
+|+++|.|++-++.+++. .........+.....+.+.. .+.+|+|+-+.. ....+.++.++|+ |||++.+.
T Consensus 191 ~Vi~~~~~~~~~~~~~~l-a~~v~~~~~~~~~~~~~~~~--~~g~D~vid~~g-----~~~~~~~~~~~l~-~~G~iv~~ 261 (343)
T 2dq4_A 191 PILVSDPNPYRLAFARPY-ADRLVNPLEEDLLEVVRRVT--GSGVEVLLEFSG-----NEAAIHQGLMALI-PGGEARIL 261 (343)
T ss_dssp SEEEECSCHHHHGGGTTT-CSEEECTTTSCHHHHHHHHH--SSCEEEEEECSC-----CHHHHHHHHHHEE-EEEEEEEC
T ss_pred EEEEECCCHHHHHHHHHh-HHhccCcCccCHHHHHHHhc--CCCCCEEEECCC-----CHHHHHHHHHHHh-cCCEEEEE
Confidence 899999999999999876 32222222111111122221 346999986554 2467899999999 99998876
Q ss_pred eC
Q 035840 87 TY 88 (213)
Q Consensus 87 ~~ 88 (213)
..
T Consensus 262 g~ 263 (343)
T 2dq4_A 262 GI 263 (343)
T ss_dssp CC
T ss_pred ec
Confidence 54
No 310
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=87.93 E-value=0.97 Score=37.33 Aligned_cols=76 Identities=20% Similarity=0.086 Sum_probs=49.4
Q ss_pred cCCeEEEEeCCHHHHHHhhcCCCceEEecCCCCcchhhccCCCCCCceeeeeechhhccCChhHHHHHHHHHhcCCCeEE
Q 035840 4 IYKNVIATDTSPKQLEFAIKLPNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWFDLPQFYKQVKWVLKKPNGVI 83 (213)
Q Consensus 4 ~~~~V~gvD~S~~ml~~Ar~~~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~d~~~~~~e~~rvLk~pgG~l 83 (213)
...+|+++|.+++.++.+++...........+.....+.+. ....+|+|+-+.+- ..+..+.++|+ +||++
T Consensus 187 ~Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~--~~~g~D~vid~~g~------~~~~~~~~~l~-~~G~i 257 (362)
T 2c0c_A 187 AKCHVIGTCSSDEKSAFLKSLGCDRPINYKTEPVGTVLKQE--YPEGVDVVYESVGG------AMFDLAVDALA-TKGRL 257 (362)
T ss_dssp TTCEEEEEESSHHHHHHHHHTTCSEEEETTTSCHHHHHHHH--CTTCEEEEEECSCT------HHHHHHHHHEE-EEEEE
T ss_pred CCCEEEEEECCHHHHHHHHHcCCcEEEecCChhHHHHHHHh--cCCCCCEEEECCCH------HHHHHHHHHHh-cCCEE
Confidence 35689999999999999987632222222211111112222 13469999976552 57889999999 99998
Q ss_pred EEEeC
Q 035840 84 AAWTY 88 (213)
Q Consensus 84 ~~~~~ 88 (213)
++...
T Consensus 258 v~~g~ 262 (362)
T 2c0c_A 258 IVIGF 262 (362)
T ss_dssp EECCC
T ss_pred EEEeC
Confidence 77654
No 311
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=87.73 E-value=0.61 Score=38.33 Aligned_cols=76 Identities=16% Similarity=0.163 Sum_probs=48.8
Q ss_pred eEEEEeCCHHHHHHhhcCCCceEEecCCCCcchhhccCCCCCCceeeeeechhhccCChhHHHHHHHHHhcCCCeEEEEE
Q 035840 7 NVIATDTSPKQLEFAIKLPNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWFDLPQFYKQVKWVLKKPNGVIAAW 86 (213)
Q Consensus 7 ~V~gvD~S~~ml~~Ar~~~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~d~~~~~~e~~rvLk~pgG~l~~~ 86 (213)
+|+++|.+++-++.+++..-........+.....+.+. .....+|+|+-+.+- +.++.++.+.|+ |||++.+.
T Consensus 193 ~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~-t~g~g~D~v~d~~g~-----~~~~~~~~~~l~-~~G~~v~~ 265 (352)
T 3fpc_A 193 RIFAVGSRKHCCDIALEYGATDIINYKNGDIVEQILKA-TDGKGVDKVVIAGGD-----VHTFAQAVKMIK-PGSDIGNV 265 (352)
T ss_dssp SEEEECCCHHHHHHHHHHTCCEEECGGGSCHHHHHHHH-TTTCCEEEEEECSSC-----TTHHHHHHHHEE-EEEEEEEC
T ss_pred EEEEECCCHHHHHHHHHhCCceEEcCCCcCHHHHHHHH-cCCCCCCEEEECCCC-----hHHHHHHHHHHh-cCCEEEEe
Confidence 79999999999999998632222222111111112221 234469999854432 467899999999 99999876
Q ss_pred eCC
Q 035840 87 TYT 89 (213)
Q Consensus 87 ~~~ 89 (213)
...
T Consensus 266 G~~ 268 (352)
T 3fpc_A 266 NYL 268 (352)
T ss_dssp CCC
T ss_pred ccc
Confidence 543
No 312
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=87.17 E-value=0.45 Score=39.64 Aligned_cols=77 Identities=14% Similarity=0.076 Sum_probs=48.5
Q ss_pred CeEEEEeCCHHHHHHhhcCCCceEEecC---CCCcchhhccCCCCCCceeeeeechhhccCChhHHHHHHHHHhcCCCeE
Q 035840 6 KNVIATDTSPKQLEFAIKLPNIRYQLTP---PTMSITELEQNVATQSSVDLVTIAAALHWFDLPQFYKQVKWVLKKPNGV 82 (213)
Q Consensus 6 ~~V~gvD~S~~ml~~Ar~~~~v~~~~~~---~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~d~~~~~~e~~rvLk~pgG~ 82 (213)
.+|+++|.|++-++.+++..-....... .+.....+.+. .....+|+|+-+.+ ....+.++.++|+ |||+
T Consensus 221 ~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~v~~~-~~g~g~Dvvid~~g-----~~~~~~~~~~~l~-~~G~ 293 (380)
T 1vj0_A 221 ENVIVIAGSPNRLKLAEEIGADLTLNRRETSVEERRKAIMDI-THGRGADFILEATG-----DSRALLEGSELLR-RGGF 293 (380)
T ss_dssp SEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHHHH-TTTSCEEEEEECSS-----CTTHHHHHHHHEE-EEEE
T ss_pred ceEEEEcCCHHHHHHHHHcCCcEEEeccccCcchHHHHHHHH-hCCCCCcEEEECCC-----CHHHHHHHHHHHh-cCCE
Confidence 4999999999999999976322222221 10000111121 12336999985544 2357899999999 9999
Q ss_pred EEEEeCC
Q 035840 83 IAAWTYT 89 (213)
Q Consensus 83 l~~~~~~ 89 (213)
+.+....
T Consensus 294 iv~~G~~ 300 (380)
T 1vj0_A 294 YSVAGVA 300 (380)
T ss_dssp EEECCCC
T ss_pred EEEEecC
Confidence 9876543
No 313
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=86.69 E-value=0.88 Score=37.45 Aligned_cols=77 Identities=14% Similarity=0.016 Sum_probs=48.2
Q ss_pred cCCeEEEEeCCHHHHHHhhcCCCceEEecCCCCcchhhccCCCCCCceeeeeechhhccCChhHHHHHHHHHhcCCCeEE
Q 035840 4 IYKNVIATDTSPKQLEFAIKLPNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWFDLPQFYKQVKWVLKKPNGVI 83 (213)
Q Consensus 4 ~~~~V~gvD~S~~ml~~Ar~~~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~d~~~~~~e~~rvLk~pgG~l 83 (213)
...+|+++|.|++.++.+++...........+.....+.+. .....+|+|+-+.+- ..+.++.++|+ +||++
T Consensus 186 ~Ga~Vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~d~vi~~~G~------~~~~~~~~~l~-~~G~i 257 (354)
T 2j8z_A 186 AGAIPLVTAGSQKKLQMAEKLGAAAGFNYKKEDFSEATLKF-TKGAGVNLILDCIGG------SYWEKNVNCLA-LDGRW 257 (354)
T ss_dssp TTCEEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHH-TTTSCEEEEEESSCG------GGHHHHHHHEE-EEEEE
T ss_pred cCCEEEEEeCCHHHHHHHHHcCCcEEEecCChHHHHHHHHH-hcCCCceEEEECCCc------hHHHHHHHhcc-CCCEE
Confidence 45699999999999999876522111221111111112221 223469999966653 35788899999 99999
Q ss_pred EEEeC
Q 035840 84 AAWTY 88 (213)
Q Consensus 84 ~~~~~ 88 (213)
++...
T Consensus 258 v~~G~ 262 (354)
T 2j8z_A 258 VLYGL 262 (354)
T ss_dssp EECCC
T ss_pred EEEec
Confidence 87654
No 314
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=86.60 E-value=1.1 Score=36.69 Aligned_cols=75 Identities=17% Similarity=0.113 Sum_probs=47.7
Q ss_pred eEEEEeCCHHHHHHhhcCCCceEEecCCCCcchhhccCCCCCCceeeeeechhhccCChhHHHHHHHHHhcCCCeEEEEE
Q 035840 7 NVIATDTSPKQLEFAIKLPNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWFDLPQFYKQVKWVLKKPNGVIAAW 86 (213)
Q Consensus 7 ~V~gvD~S~~ml~~Ar~~~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~d~~~~~~e~~rvLk~pgG~l~~~ 86 (213)
+|+++|.|++-++.+++..-........+.....+.+. .....+|+|+-+... ...+.++.+.|+ +||++...
T Consensus 194 ~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~v~~~-~~g~g~D~vid~~g~-----~~~~~~~~~~l~-~~G~iv~~ 266 (348)
T 2d8a_A 194 PVIVSEPSDFRRELAKKVGADYVINPFEEDVVKEVMDI-TDGNGVDVFLEFSGA-----PKALEQGLQAVT-PAGRVSLL 266 (348)
T ss_dssp SEEEECSCHHHHHHHHHHTCSEEECTTTSCHHHHHHHH-TTTSCEEEEEECSCC-----HHHHHHHHHHEE-EEEEEEEC
T ss_pred EEEEECCCHHHHHHHHHhCCCEEECCCCcCHHHHHHHH-cCCCCCCEEEECCCC-----HHHHHHHHHHHh-cCCEEEEE
Confidence 89999999999999987532112222111111112221 123469999866542 467899999999 99999876
Q ss_pred eC
Q 035840 87 TY 88 (213)
Q Consensus 87 ~~ 88 (213)
..
T Consensus 267 g~ 268 (348)
T 2d8a_A 267 GL 268 (348)
T ss_dssp CC
T ss_pred cc
Confidence 54
No 315
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=86.59 E-value=1.3 Score=36.23 Aligned_cols=74 Identities=20% Similarity=0.261 Sum_probs=48.9
Q ss_pred CCeEEEEeCCHHHHHHhhcCCCceEEecCCCCcchhhccCCCCCCceeeeeechhhccCChhHHHHHHHHHhcCCCeEEE
Q 035840 5 YKNVIATDTSPKQLEFAIKLPNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWFDLPQFYKQVKWVLKKPNGVIA 84 (213)
Q Consensus 5 ~~~V~gvD~S~~ml~~Ar~~~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~d~~~~~~e~~rvLk~pgG~l~ 84 (213)
.++|+++|.+++-++.+++.. ........+.....+.+. ..+.+|+|+-+.. -..++..+.++|+ |||+++
T Consensus 175 Ga~Vi~~~~~~~~~~~~~~lG-a~~vi~~~~~~~~~~~~~--~~~g~Dvv~d~~g-----~~~~~~~~~~~l~-~~G~iv 245 (346)
T 3fbg_A 175 GLRVITTASRNETIEWTKKMG-ADIVLNHKESLLNQFKTQ--GIELVDYVFCTFN-----TDMYYDDMIQLVK-PRGHIA 245 (346)
T ss_dssp TCEEEEECCSHHHHHHHHHHT-CSEEECTTSCHHHHHHHH--TCCCEEEEEESSC-----HHHHHHHHHHHEE-EEEEEE
T ss_pred CCEEEEEeCCHHHHHHHHhcC-CcEEEECCccHHHHHHHh--CCCCccEEEECCC-----chHHHHHHHHHhc-cCCEEE
Confidence 569999999999999999853 222222111112223332 3456999986543 3567899999999 999996
Q ss_pred EEe
Q 035840 85 AWT 87 (213)
Q Consensus 85 ~~~ 87 (213)
...
T Consensus 246 ~~~ 248 (346)
T 3fbg_A 246 TIV 248 (346)
T ss_dssp ESS
T ss_pred EEC
Confidence 543
No 316
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=85.96 E-value=0.96 Score=36.90 Aligned_cols=78 Identities=14% Similarity=0.061 Sum_probs=47.7
Q ss_pred cCCeEEEEeCCHHHHHHhhcCCCceEEecCCCCcchhhccCCCCCCceeeeeechhhccCChhHHHHHHHHHhcCCCeEE
Q 035840 4 IYKNVIATDTSPKQLEFAIKLPNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWFDLPQFYKQVKWVLKKPNGVI 83 (213)
Q Consensus 4 ~~~~V~gvD~S~~ml~~Ar~~~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~d~~~~~~e~~rvLk~pgG~l 83 (213)
..++|+++|.|++-++.+++...........+.....+.+. .....+|+|+-+.+- ....+..+.|+ |||++
T Consensus 168 ~Ga~Vi~~~~~~~~~~~~~~lga~~~~~~~~~~~~~~~~~~-~~~~g~Dvvid~~g~------~~~~~~~~~l~-~~G~i 239 (340)
T 3gms_A 168 LNFRLIAVTRNNKHTEELLRLGAAYVIDTSTAPLYETVMEL-TNGIGADAAIDSIGG------PDGNELAFSLR-PNGHF 239 (340)
T ss_dssp HTCEEEEEESSSTTHHHHHHHTCSEEEETTTSCHHHHHHHH-TTTSCEEEEEESSCH------HHHHHHHHTEE-EEEEE
T ss_pred cCCEEEEEeCCHHHHHHHHhCCCcEEEeCCcccHHHHHHHH-hCCCCCcEEEECCCC------hhHHHHHHHhc-CCCEE
Confidence 35699999999999999988532222222221111112222 234469999966553 22345568999 99999
Q ss_pred EEEeCC
Q 035840 84 AAWTYT 89 (213)
Q Consensus 84 ~~~~~~ 89 (213)
.+....
T Consensus 240 v~~G~~ 245 (340)
T 3gms_A 240 LTIGLL 245 (340)
T ss_dssp EECCCT
T ss_pred EEEeec
Confidence 876543
No 317
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=85.65 E-value=1.4 Score=35.87 Aligned_cols=76 Identities=16% Similarity=0.175 Sum_probs=48.7
Q ss_pred cCCeEEEEeCCHHHHHHhhcCCCceEEe-cCCCCcchhhccCCCCCCceeeeeechhhccCChhHHHHHHHHHhcCCCeE
Q 035840 4 IYKNVIATDTSPKQLEFAIKLPNIRYQL-TPPTMSITELEQNVATQSSVDLVTIAAALHWFDLPQFYKQVKWVLKKPNGV 82 (213)
Q Consensus 4 ~~~~V~gvD~S~~ml~~Ar~~~~v~~~~-~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~d~~~~~~e~~rvLk~pgG~ 82 (213)
...+|+++|.|++-++.+++.. ..... ...+.....+.+.. +.+|+|+-+.. ....+.++.++|+ +||+
T Consensus 187 ~Ga~Vi~~~~~~~~~~~~~~lG-a~~~~d~~~~~~~~~~~~~~---~~~d~vid~~g-----~~~~~~~~~~~l~-~~G~ 256 (339)
T 1rjw_A 187 MGLNVVAVDIGDEKLELAKELG-ADLVVNPLKEDAAKFMKEKV---GGVHAAVVTAV-----SKPAFQSAYNSIR-RGGA 256 (339)
T ss_dssp TTCEEEEECSCHHHHHHHHHTT-CSEEECTTTSCHHHHHHHHH---SSEEEEEESSC-----CHHHHHHHHHHEE-EEEE
T ss_pred cCCEEEEEeCCHHHHHHHHHCC-CCEEecCCCccHHHHHHHHh---CCCCEEEECCC-----CHHHHHHHHHHhh-cCCE
Confidence 3569999999999999998763 22222 11111111111211 36999986554 2467899999999 9999
Q ss_pred EEEEeCC
Q 035840 83 IAAWTYT 89 (213)
Q Consensus 83 l~~~~~~ 89 (213)
+.+....
T Consensus 257 ~v~~g~~ 263 (339)
T 1rjw_A 257 CVLVGLP 263 (339)
T ss_dssp EEECCCC
T ss_pred EEEeccc
Confidence 9876543
No 318
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=84.81 E-value=2.3 Score=35.12 Aligned_cols=77 Identities=14% Similarity=0.104 Sum_probs=49.1
Q ss_pred eEEEEeCCHHHHHHhhcCCCceEEecCCCCcchhhcc-CCCCCCceeeeeechhhccCChhHHHHHHHHHhcCCCeEEEE
Q 035840 7 NVIATDTSPKQLEFAIKLPNIRYQLTPPTMSITELEQ-NVATQSSVDLVTIAAALHWFDLPQFYKQVKWVLKKPNGVIAA 85 (213)
Q Consensus 7 ~V~gvD~S~~ml~~Ar~~~~v~~~~~~~~~~~~d~~~-~~~~~~sfDlV~~~~~~hw~d~~~~~~e~~rvLk~pgG~l~~ 85 (213)
+|+++|.|++-++.|++..-........+.....+.+ ....++.+|+|+-+.+ -...+.++.++|+ |||++++
T Consensus 209 ~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~i~~~~~~~~gg~Dvvid~~G-----~~~~~~~~~~~l~-~~G~vv~ 282 (370)
T 4ej6_A 209 TVILSTRQATKRRLAEEVGATATVDPSAGDVVEAIAGPVGLVPGGVDVVIECAG-----VAETVKQSTRLAK-AGGTVVI 282 (370)
T ss_dssp EEEEECSCHHHHHHHHHHTCSEEECTTSSCHHHHHHSTTSSSTTCEEEEEECSC-----CHHHHHHHHHHEE-EEEEEEE
T ss_pred EEEEECCCHHHHHHHHHcCCCEEECCCCcCHHHHHHhhhhccCCCCCEEEECCC-----CHHHHHHHHHHhc-cCCEEEE
Confidence 8999999999999999863222222211111111111 0122347999996543 2468899999999 9999987
Q ss_pred EeCC
Q 035840 86 WTYT 89 (213)
Q Consensus 86 ~~~~ 89 (213)
....
T Consensus 283 ~G~~ 286 (370)
T 4ej6_A 283 LGVL 286 (370)
T ss_dssp CSCC
T ss_pred Eecc
Confidence 6543
No 319
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=84.56 E-value=1 Score=36.89 Aligned_cols=76 Identities=13% Similarity=0.070 Sum_probs=48.3
Q ss_pred cCCeEEEEeCCHHHHHHhhcCCCceEEecCCCCcchhhccCCCCCCceeeeeechhhccCChhHHHHHHHHHhcCCCeEE
Q 035840 4 IYKNVIATDTSPKQLEFAIKLPNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWFDLPQFYKQVKWVLKKPNGVI 83 (213)
Q Consensus 4 ~~~~V~gvD~S~~ml~~Ar~~~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~d~~~~~~e~~rvLk~pgG~l 83 (213)
...+|++++.+++-++.+++.......... +.....+.+. .....+|+|+-+.+- ..+.++.+.|+ +||++
T Consensus 183 ~Ga~Vi~~~~~~~~~~~~~~~ga~~v~~~~-~~~~~~v~~~-~~~~g~Dvvid~~g~------~~~~~~~~~l~-~~G~i 253 (342)
T 4eye_A 183 MGAKVIAVVNRTAATEFVKSVGADIVLPLE-EGWAKAVREA-TGGAGVDMVVDPIGG------PAFDDAVRTLA-SEGRL 253 (342)
T ss_dssp TTCEEEEEESSGGGHHHHHHHTCSEEEESS-TTHHHHHHHH-TTTSCEEEEEESCC--------CHHHHHHTEE-EEEEE
T ss_pred cCCEEEEEeCCHHHHHHHHhcCCcEEecCc-hhHHHHHHHH-hCCCCceEEEECCch------hHHHHHHHhhc-CCCEE
Confidence 356999999999999999885322222222 2222222222 233469999966553 25788999999 99999
Q ss_pred EEEeC
Q 035840 84 AAWTY 88 (213)
Q Consensus 84 ~~~~~ 88 (213)
++...
T Consensus 254 v~~G~ 258 (342)
T 4eye_A 254 LVVGF 258 (342)
T ss_dssp EEC--
T ss_pred EEEEc
Confidence 87654
No 320
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=84.28 E-value=1.2 Score=36.34 Aligned_cols=77 Identities=13% Similarity=0.036 Sum_probs=50.0
Q ss_pred CCeEEEEeCCHHHHHHhhcCCCceEEecCCCCcchhhccCCCCCCceeeeeechhhccCChhHHHHHHHHHhcCCCeEEE
Q 035840 5 YKNVIATDTSPKQLEFAIKLPNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWFDLPQFYKQVKWVLKKPNGVIA 84 (213)
Q Consensus 5 ~~~V~gvD~S~~ml~~Ar~~~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~d~~~~~~e~~rvLk~pgG~l~ 84 (213)
..+|+++|.|++-++.+++..-........ .....+.+. .....+|+|+-+..- +..+.++.++|+ |||++.
T Consensus 196 ~~~Vi~~~~~~~~~~~~~~lGa~~~i~~~~-~~~~~v~~~-t~g~g~d~v~d~~G~-----~~~~~~~~~~l~-~~G~iv 267 (345)
T 3jv7_A 196 AARVIAVDLDDDRLALAREVGADAAVKSGA-GAADAIREL-TGGQGATAVFDFVGA-----QSTIDTAQQVVA-VDGHIS 267 (345)
T ss_dssp CCEEEEEESCHHHHHHHHHTTCSEEEECST-THHHHHHHH-HGGGCEEEEEESSCC-----HHHHHHHHHHEE-EEEEEE
T ss_pred CCEEEEEcCCHHHHHHHHHcCCCEEEcCCC-cHHHHHHHH-hCCCCCeEEEECCCC-----HHHHHHHHHHHh-cCCEEE
Confidence 569999999999999999873222222211 111111111 123369999865432 458899999999 999998
Q ss_pred EEeCC
Q 035840 85 AWTYT 89 (213)
Q Consensus 85 ~~~~~ 89 (213)
+....
T Consensus 268 ~~G~~ 272 (345)
T 3jv7_A 268 VVGIH 272 (345)
T ss_dssp ECSCC
T ss_pred EECCC
Confidence 76543
No 321
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=83.67 E-value=2 Score=35.24 Aligned_cols=75 Identities=11% Similarity=0.034 Sum_probs=47.9
Q ss_pred cCC-eEEEEeCCHHHHHHhhc-CCCceEEe-cCCCCcchhhccCCCCCCceeeeeechhhccCChhHHHHHHHHHhcCCC
Q 035840 4 IYK-NVIATDTSPKQLEFAIK-LPNIRYQL-TPPTMSITELEQNVATQSSVDLVTIAAALHWFDLPQFYKQVKWVLKKPN 80 (213)
Q Consensus 4 ~~~-~V~gvD~S~~ml~~Ar~-~~~v~~~~-~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~d~~~~~~e~~rvLk~pg 80 (213)
... +|+++|.+++-++.+++ . +..... ...+.....+.+. ... .+|+|+-+.+ ...+.++.++|+ +|
T Consensus 184 ~Ga~~Vi~~~~~~~~~~~~~~~~-g~~~~~d~~~~~~~~~~~~~-~~~-~~d~vi~~~G------~~~~~~~~~~l~-~~ 253 (357)
T 2zb4_A 184 LGCSRVVGICGTHEKCILLTSEL-GFDAAINYKKDNVAEQLRES-CPA-GVDVYFDNVG------GNISDTVISQMN-EN 253 (357)
T ss_dssp TTCSEEEEEESCHHHHHHHHHTS-CCSEEEETTTSCHHHHHHHH-CTT-CEEEEEESCC------HHHHHHHHHTEE-EE
T ss_pred CCCCeEEEEeCCHHHHHHHHHHc-CCceEEecCchHHHHHHHHh-cCC-CCCEEEECCC------HHHHHHHHHHhc-cC
Confidence 345 99999999999888876 4 333222 1111111112221 122 6999997666 267899999999 99
Q ss_pred eEEEEEeC
Q 035840 81 GVIAAWTY 88 (213)
Q Consensus 81 G~l~~~~~ 88 (213)
|++++...
T Consensus 254 G~iv~~G~ 261 (357)
T 2zb4_A 254 SHIILCGQ 261 (357)
T ss_dssp EEEEECCC
T ss_pred cEEEEECC
Confidence 99987654
No 322
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=83.66 E-value=0.9 Score=36.93 Aligned_cols=78 Identities=19% Similarity=0.109 Sum_probs=48.3
Q ss_pred cCCeEEEEeCCHHHHHHhhcCCCceEEecCCCCcchhhccCCCCCCceeeeeechhhccCChhHHHHHHHHHhcCCCeEE
Q 035840 4 IYKNVIATDTSPKQLEFAIKLPNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWFDLPQFYKQVKWVLKKPNGVI 83 (213)
Q Consensus 4 ~~~~V~gvD~S~~ml~~Ar~~~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~d~~~~~~e~~rvLk~pgG~l 83 (213)
...+|+++|.+++.++.+++...........+.....+.+. .....+|+|+-+.+- ..+.++.++|+ |||++
T Consensus 169 ~G~~Vi~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~i~~~-~~~~~~d~vi~~~g~------~~~~~~~~~l~-~~G~i 240 (333)
T 1wly_A 169 LGATVIGTVSTEEKAETARKLGCHHTINYSTQDFAEVVREI-TGGKGVDVVYDSIGK------DTLQKSLDCLR-PRGMC 240 (333)
T ss_dssp TTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHH-HTTCCEEEEEECSCT------TTHHHHHHTEE-EEEEE
T ss_pred CCCEEEEEeCCHHHHHHHHHcCCCEEEECCCHHHHHHHHHH-hCCCCCeEEEECCcH------HHHHHHHHhhc-cCCEE
Confidence 45699999999999988886421111211111111111111 123469999966553 56889999999 99999
Q ss_pred EEEeCC
Q 035840 84 AAWTYT 89 (213)
Q Consensus 84 ~~~~~~ 89 (213)
++....
T Consensus 241 v~~g~~ 246 (333)
T 1wly_A 241 AAYGHA 246 (333)
T ss_dssp EECCCT
T ss_pred EEEecC
Confidence 876543
No 323
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=83.58 E-value=2.1 Score=34.77 Aligned_cols=75 Identities=12% Similarity=0.093 Sum_probs=48.8
Q ss_pred cCCeEEEEeCCHHHHHHhh-cCCCceEE-e-cCCCCcchhhccCCCCCCceeeeeechhhccCChhHHHHHHHHHhcCCC
Q 035840 4 IYKNVIATDTSPKQLEFAI-KLPNIRYQ-L-TPPTMSITELEQNVATQSSVDLVTIAAALHWFDLPQFYKQVKWVLKKPN 80 (213)
Q Consensus 4 ~~~~V~gvD~S~~ml~~Ar-~~~~v~~~-~-~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~d~~~~~~e~~rvLk~pg 80 (213)
...+|+++|.|++.++.++ +.. .... . .+.+.+...+.+.. .+.+|+|+.+.+. ..+..+.+.|+ ||
T Consensus 179 ~G~~V~~~~~~~~~~~~~~~~~g-~~~~~d~~~~~~~~~~~~~~~--~~~~d~vi~~~g~------~~~~~~~~~l~-~~ 248 (345)
T 2j3h_A 179 MGCYVVGSAGSKEKVDLLKTKFG-FDDAFNYKEESDLTAALKRCF--PNGIDIYFENVGG------KMLDAVLVNMN-MH 248 (345)
T ss_dssp TTCEEEEEESSHHHHHHHHHTSC-CSEEEETTSCSCSHHHHHHHC--TTCEEEEEESSCH------HHHHHHHTTEE-EE
T ss_pred CCCEEEEEeCCHHHHHHHHHHcC-CceEEecCCHHHHHHHHHHHh--CCCCcEEEECCCH------HHHHHHHHHHh-cC
Confidence 4568999999999999998 452 2222 1 11111122222221 2569999976653 37889999999 99
Q ss_pred eEEEEEeC
Q 035840 81 GVIAAWTY 88 (213)
Q Consensus 81 G~l~~~~~ 88 (213)
|++++...
T Consensus 249 G~~v~~G~ 256 (345)
T 2j3h_A 249 GRIAVCGM 256 (345)
T ss_dssp EEEEECCC
T ss_pred CEEEEEcc
Confidence 99987654
No 324
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=83.38 E-value=2.2 Score=34.96 Aligned_cols=72 Identities=19% Similarity=0.216 Sum_probs=47.0
Q ss_pred eEEEEeCCHH---HHHHhhcCCCceEEecCCCCcchhhccCCCCCCceeeeeechhhccCChhHHHHHHHHHhcCCCeEE
Q 035840 7 NVIATDTSPK---QLEFAIKLPNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWFDLPQFYKQVKWVLKKPNGVI 83 (213)
Q Consensus 7 ~V~gvD~S~~---ml~~Ar~~~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~d~~~~~~e~~rvLk~pgG~l 83 (213)
+|+++|.|++ -++.+++. ++.......+.... +.+. ++.+|+|+-+.+ -...+.++.++|+ |||++
T Consensus 201 ~Vi~~~~~~~~~~~~~~~~~l-Ga~~v~~~~~~~~~-i~~~---~gg~Dvvid~~g-----~~~~~~~~~~~l~-~~G~i 269 (357)
T 2b5w_A 201 NLYCLGRRDRPDPTIDIIEEL-DATYVDSRQTPVED-VPDV---YEQMDFIYEATG-----FPKHAIQSVQALA-PNGVG 269 (357)
T ss_dssp EEEEEECCCSSCHHHHHHHHT-TCEEEETTTSCGGG-HHHH---SCCEEEEEECSC-----CHHHHHHHHHHEE-EEEEE
T ss_pred EEEEEeCCcccHHHHHHHHHc-CCcccCCCccCHHH-HHHh---CCCCCEEEECCC-----ChHHHHHHHHHHh-cCCEE
Confidence 3999999998 89999876 33333221111111 2222 237999985544 2357899999999 99999
Q ss_pred EEEeCC
Q 035840 84 AAWTYT 89 (213)
Q Consensus 84 ~~~~~~ 89 (213)
++....
T Consensus 270 v~~g~~ 275 (357)
T 2b5w_A 270 ALLGVP 275 (357)
T ss_dssp EECCCC
T ss_pred EEEeCC
Confidence 876543
No 325
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=83.24 E-value=1.9 Score=35.66 Aligned_cols=75 Identities=13% Similarity=0.024 Sum_probs=48.6
Q ss_pred eEEEEeCCHHHHHHhhcCCCceEEecC--CCCcchhhccCCCCCCceeeeeechhhccCChhHHHHHHHHHhcCCC-eEE
Q 035840 7 NVIATDTSPKQLEFAIKLPNIRYQLTP--PTMSITELEQNVATQSSVDLVTIAAALHWFDLPQFYKQVKWVLKKPN-GVI 83 (213)
Q Consensus 7 ~V~gvD~S~~ml~~Ar~~~~v~~~~~~--~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~d~~~~~~e~~rvLk~pg-G~l 83 (213)
+|+++|.|++-++.|++..-...+... .+.....+.+. .++.+|+|+-+.. -..++.++.+.|+ || |++
T Consensus 220 ~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~--~~gg~D~vid~~g-----~~~~~~~~~~~l~-~g~G~i 291 (378)
T 3uko_A 220 RIIGIDIDSKKYETAKKFGVNEFVNPKDHDKPIQEVIVDL--TDGGVDYSFECIG-----NVSVMRAALECCH-KGWGTS 291 (378)
T ss_dssp CEEEECSCTTHHHHHHTTTCCEEECGGGCSSCHHHHHHHH--TTSCBSEEEECSC-----CHHHHHHHHHTBC-TTTCEE
T ss_pred eEEEEcCCHHHHHHHHHcCCcEEEccccCchhHHHHHHHh--cCCCCCEEEECCC-----CHHHHHHHHHHhh-ccCCEE
Confidence 899999999999999987322222211 11111112222 2337999986543 3567899999999 97 999
Q ss_pred EEEeCC
Q 035840 84 AAWTYT 89 (213)
Q Consensus 84 ~~~~~~ 89 (213)
.+....
T Consensus 292 v~~G~~ 297 (378)
T 3uko_A 292 VIVGVA 297 (378)
T ss_dssp EECSCC
T ss_pred EEEccc
Confidence 877653
No 326
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=83.19 E-value=1.3 Score=36.32 Aligned_cols=74 Identities=12% Similarity=0.091 Sum_probs=47.0
Q ss_pred eEEEEeCCHHHHHHhhcCCCceEEecC---CCCcchhhccCCCCCCceeeeeechhhccCChhHHHHHHHHHhcCCCeEE
Q 035840 7 NVIATDTSPKQLEFAIKLPNIRYQLTP---PTMSITELEQNVATQSSVDLVTIAAALHWFDLPQFYKQVKWVLKKPNGVI 83 (213)
Q Consensus 7 ~V~gvD~S~~ml~~Ar~~~~v~~~~~~---~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~d~~~~~~e~~rvLk~pgG~l 83 (213)
+|+++|.|++-++.+++..--...... .+.....+.+. .. +.+|+|+-+.. -...+.++.++|+ |||++
T Consensus 198 ~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~i~~~-~~-~g~D~vid~~g-----~~~~~~~~~~~l~-~~G~i 269 (356)
T 1pl8_A 198 QVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEGQ-LG-CKPEVTIECTG-----AEASIQAGIYATR-SGGTL 269 (356)
T ss_dssp EEEEEESCHHHHHHHHHTTCSEEEECSSCCHHHHHHHHHHH-HT-SCCSEEEECSC-----CHHHHHHHHHHSC-TTCEE
T ss_pred EEEEECCCHHHHHHHHHhCCCEEEcCcccccchHHHHHHHH-hC-CCCCEEEECCC-----ChHHHHHHHHHhc-CCCEE
Confidence 899999999999999986321222221 00000111111 12 46999986544 2457889999999 99999
Q ss_pred EEEeC
Q 035840 84 AAWTY 88 (213)
Q Consensus 84 ~~~~~ 88 (213)
.+...
T Consensus 270 v~~G~ 274 (356)
T 1pl8_A 270 VLVGL 274 (356)
T ss_dssp EECSC
T ss_pred EEEec
Confidence 87654
No 327
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=83.17 E-value=2.1 Score=34.43 Aligned_cols=72 Identities=13% Similarity=-0.036 Sum_probs=48.1
Q ss_pred CCeEEEEeCCHHHHHHhhcCCCceEEec-CCCCcchhhccCCCCCCceeeeeechhhccCChhHHHHHHHHHhcCCCeEE
Q 035840 5 YKNVIATDTSPKQLEFAIKLPNIRYQLT-PPTMSITELEQNVATQSSVDLVTIAAALHWFDLPQFYKQVKWVLKKPNGVI 83 (213)
Q Consensus 5 ~~~V~gvD~S~~ml~~Ar~~~~v~~~~~-~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~d~~~~~~e~~rvLk~pgG~l 83 (213)
..+|+++|.|++-++.+++..-...... +.+ ...+ +..+.+|+|+-+.+- ..+.++.++|+ |||++
T Consensus 171 Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~----~~~~--~~~~~~d~v~d~~g~------~~~~~~~~~l~-~~G~i 237 (324)
T 3nx4_A 171 GYQVAAVSGRESTHGYLKSLGANRILSRDEFA----ESRP--LEKQLWAGAIDTVGD------KVLAKVLAQMN-YGGCV 237 (324)
T ss_dssp TCCEEEEESCGGGHHHHHHHTCSEEEEGGGSS----CCCS--SCCCCEEEEEESSCH------HHHHHHHHTEE-EEEEE
T ss_pred CCEEEEEeCCHHHHHHHHhcCCCEEEecCCHH----HHHh--hcCCCccEEEECCCc------HHHHHHHHHHh-cCCEE
Confidence 5699999999999999998632222221 110 0111 334579998865432 38899999999 99999
Q ss_pred EEEeCC
Q 035840 84 AAWTYT 89 (213)
Q Consensus 84 ~~~~~~ 89 (213)
......
T Consensus 238 v~~G~~ 243 (324)
T 3nx4_A 238 AACGLA 243 (324)
T ss_dssp EECCCT
T ss_pred EEEecC
Confidence 876543
No 328
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=83.10 E-value=2.8 Score=34.25 Aligned_cols=77 Identities=10% Similarity=0.016 Sum_probs=47.9
Q ss_pred CCeEEEEeCCHHHHHHhhcCCCceEEecC-CCCcchhhccCCCC---CCceeeeeechhhccCChhHHHHHHHHHhcCCC
Q 035840 5 YKNVIATDTSPKQLEFAIKLPNIRYQLTP-PTMSITELEQNVAT---QSSVDLVTIAAALHWFDLPQFYKQVKWVLKKPN 80 (213)
Q Consensus 5 ~~~V~gvD~S~~ml~~Ar~~~~v~~~~~~-~~~~~~d~~~~~~~---~~sfDlV~~~~~~hw~d~~~~~~e~~rvLk~pg 80 (213)
..+|+++|.|++-++.+++..-....... .+.....+.+. .+ .+.+|+|+-+... ...+.++.++|+ ||
T Consensus 192 Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~~i~~~-~~~~~g~g~D~vid~~g~-----~~~~~~~~~~l~-~~ 264 (352)
T 1e3j_A 192 GAFVVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIER-IRSAIGDLPNVTIDCSGN-----EKCITIGINITR-TG 264 (352)
T ss_dssp TCEEEEEESCHHHHHHHHHTTCSEEEECCTTTSCHHHHHHH-HHHHSSSCCSEEEECSCC-----HHHHHHHHHHSC-TT
T ss_pred CCEEEEEcCCHHHHHHHHHhCCCEEEcCcccccHHHHHHHH-hccccCCCCCEEEECCCC-----HHHHHHHHHHHh-cC
Confidence 45799999999999999986321222211 01111111111 11 2459999865432 457889999999 99
Q ss_pred eEEEEEeC
Q 035840 81 GVIAAWTY 88 (213)
Q Consensus 81 G~l~~~~~ 88 (213)
|++.+...
T Consensus 265 G~iv~~G~ 272 (352)
T 1e3j_A 265 GTLMLVGM 272 (352)
T ss_dssp CEEEECSC
T ss_pred CEEEEEec
Confidence 99987654
No 329
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=82.95 E-value=3.4 Score=33.54 Aligned_cols=78 Identities=21% Similarity=0.169 Sum_probs=49.0
Q ss_pred CCeEEEEeCCHHHHHHhhcCCCceEEecCCCCcchhhccCCCCCCceeeeeechhhccCChhHHHHHHHHHhcCCCeEEE
Q 035840 5 YKNVIATDTSPKQLEFAIKLPNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWFDLPQFYKQVKWVLKKPNGVIA 84 (213)
Q Consensus 5 ~~~V~gvD~S~~ml~~Ar~~~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~d~~~~~~e~~rvLk~pgG~l~ 84 (213)
..+|+++|.|++-++.+++...........+.....+.+. .....+|.++.... -..++....+.|+ +||++.
T Consensus 188 g~~Vi~~~~~~~r~~~~~~~Ga~~~i~~~~~~~~~~v~~~-t~g~g~d~~~~~~~-----~~~~~~~~~~~l~-~~G~~v 260 (348)
T 4eez_A 188 GAKVIAVDINQDKLNLAKKIGADVTINSGDVNPVDEIKKI-TGGLGVQSAIVCAV-----ARIAFEQAVASLK-PMGKMV 260 (348)
T ss_dssp CCEEEEEESCHHHHHHHHHTTCSEEEEC-CCCHHHHHHHH-TTSSCEEEEEECCS-----CHHHHHHHHHTEE-EEEEEE
T ss_pred CCEEEEEECcHHHhhhhhhcCCeEEEeCCCCCHHHHhhhh-cCCCCceEEEEecc-----Ccchhheeheeec-CCceEE
Confidence 5799999999999999998643333322221111122222 23345777764332 3578899999999 999997
Q ss_pred EEeCC
Q 035840 85 AWTYT 89 (213)
Q Consensus 85 ~~~~~ 89 (213)
+....
T Consensus 261 ~~g~~ 265 (348)
T 4eez_A 261 AVAVP 265 (348)
T ss_dssp ECCCC
T ss_pred EEecc
Confidence 76543
No 330
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=82.52 E-value=1.2 Score=36.34 Aligned_cols=77 Identities=19% Similarity=0.034 Sum_probs=48.2
Q ss_pred cCCeEEEEeCCHHHHHHhhcCCCceEEecCCCCcchhhccCCCCCCceeeeeechhhccCChhHHHHHHHHHhcCCCeEE
Q 035840 4 IYKNVIATDTSPKQLEFAIKLPNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWFDLPQFYKQVKWVLKKPNGVI 83 (213)
Q Consensus 4 ~~~~V~gvD~S~~ml~~Ar~~~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~d~~~~~~e~~rvLk~pgG~l 83 (213)
...+|+++|.|++.++.+++...........+.....+.+. .....+|+|+-+.+ ...+..+.+.|+ +||++
T Consensus 190 ~G~~Vi~~~~~~~~~~~~~~~ga~~~~d~~~~~~~~~~~~~-~~~~~~d~vi~~~g------~~~~~~~~~~l~-~~G~~ 261 (343)
T 2eih_A 190 FGARVIATAGSEDKLRRAKALGADETVNYTHPDWPKEVRRL-TGGKGADKVVDHTG------ALYFEGVIKATA-NGGRI 261 (343)
T ss_dssp TTCEEEEEESSHHHHHHHHHHTCSEEEETTSTTHHHHHHHH-TTTTCEEEEEESSC------SSSHHHHHHHEE-EEEEE
T ss_pred CCCEEEEEeCCHHHHHHHHhcCCCEEEcCCcccHHHHHHHH-hCCCCceEEEECCC------HHHHHHHHHhhc-cCCEE
Confidence 45699999999999999886522112221111111112221 12346999996655 246788999999 99998
Q ss_pred EEEeC
Q 035840 84 AAWTY 88 (213)
Q Consensus 84 ~~~~~ 88 (213)
.+...
T Consensus 262 v~~g~ 266 (343)
T 2eih_A 262 AIAGA 266 (343)
T ss_dssp EESSC
T ss_pred EEEec
Confidence 76654
No 331
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=82.03 E-value=1.4 Score=35.96 Aligned_cols=68 Identities=16% Similarity=0.100 Sum_probs=48.2
Q ss_pred CCeEEEEeCCHHHHHHhhcCCCceEEecCCCCcchhhccCCCCCCceeeeeechhhccCChhHHHHHHHHHhcCCCeEEE
Q 035840 5 YKNVIATDTSPKQLEFAIKLPNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWFDLPQFYKQVKWVLKKPNGVIA 84 (213)
Q Consensus 5 ~~~V~gvD~S~~ml~~Ar~~~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~d~~~~~~e~~rvLk~pgG~l~ 84 (213)
..+|+++|.|++-++.+++... .....+. +. +.. .+|+|+-+.+- ...+.++.++|+ |||++.
T Consensus 200 Ga~Vi~~~~~~~~~~~~~~lGa-~~v~~~~-------~~--~~~-~~D~vid~~g~-----~~~~~~~~~~l~-~~G~iv 262 (348)
T 3two_A 200 GAEVSVFARNEHKKQDALSMGV-KHFYTDP-------KQ--CKE-ELDFIISTIPT-----HYDLKDYLKLLT-YNGDLA 262 (348)
T ss_dssp TCEEEEECSSSTTHHHHHHTTC-SEEESSG-------GG--CCS-CEEEEEECCCS-----CCCHHHHHTTEE-EEEEEE
T ss_pred CCeEEEEeCCHHHHHHHHhcCC-CeecCCH-------HH--Hhc-CCCEEEECCCc-----HHHHHHHHHHHh-cCCEEE
Confidence 5699999999999999998742 2222322 22 222 69999865442 246888999999 999998
Q ss_pred EEeCC
Q 035840 85 AWTYT 89 (213)
Q Consensus 85 ~~~~~ 89 (213)
+....
T Consensus 263 ~~G~~ 267 (348)
T 3two_A 263 LVGLP 267 (348)
T ss_dssp ECCCC
T ss_pred EECCC
Confidence 77554
No 332
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=81.36 E-value=1.1 Score=36.62 Aligned_cols=77 Identities=9% Similarity=-0.006 Sum_probs=49.0
Q ss_pred cCCeEEEEeCCHHHHHHhhcCCCceEEe--cCCCCcchhhccCCCCCCceeeeeechhhccCChhHHHHHHHHHhcCCCe
Q 035840 4 IYKNVIATDTSPKQLEFAIKLPNIRYQL--TPPTMSITELEQNVATQSSVDLVTIAAALHWFDLPQFYKQVKWVLKKPNG 81 (213)
Q Consensus 4 ~~~~V~gvD~S~~ml~~Ar~~~~v~~~~--~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~d~~~~~~e~~rvLk~pgG 81 (213)
...+|+++|.|++.++.+++.. ..... .+.+.....+.+.. .. .+|+|+.+.+ ....+.++.+.|+ +||
T Consensus 193 ~Ga~V~~~~~~~~~~~~~~~~g-~~~~~d~~~~~~~~~~~~~~~-~~-~~D~vi~~~g-----~~~~~~~~~~~l~-~~G 263 (347)
T 2hcy_A 193 MGYRVLGIDGGEGKEELFRSIG-GEVFIDFTKEKDIVGAVLKAT-DG-GAHGVINVSV-----SEAAIEASTRYVR-ANG 263 (347)
T ss_dssp TTCEEEEEECSTTHHHHHHHTT-CCEEEETTTCSCHHHHHHHHH-TS-CEEEEEECSS-----CHHHHHHHTTSEE-EEE
T ss_pred CCCcEEEEcCCHHHHHHHHHcC-CceEEecCccHhHHHHHHHHh-CC-CCCEEEECCC-----cHHHHHHHHHHHh-cCC
Confidence 4569999999999999888753 22221 11111111122211 12 6999986654 2467899999999 999
Q ss_pred EEEEEeCC
Q 035840 82 VIAAWTYT 89 (213)
Q Consensus 82 ~l~~~~~~ 89 (213)
++.+....
T Consensus 264 ~iv~~g~~ 271 (347)
T 2hcy_A 264 TTVLVGMP 271 (347)
T ss_dssp EEEECCCC
T ss_pred EEEEEeCC
Confidence 99876543
No 333
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=81.34 E-value=1.2 Score=36.56 Aligned_cols=76 Identities=7% Similarity=-0.092 Sum_probs=47.1
Q ss_pred CCeEEEEeCCHHHHHHhhcCCCceEEecCCCCcchhhccCCCCCCceeeeeechhhccCChhHHHHHHHHHhcCCCeEEE
Q 035840 5 YKNVIATDTSPKQLEFAIKLPNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWFDLPQFYKQVKWVLKKPNGVIA 84 (213)
Q Consensus 5 ~~~V~gvD~S~~ml~~Ar~~~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~d~~~~~~e~~rvLk~pgG~l~ 84 (213)
.++|+++|.|++-++.+++...........+.....+.+. .....+|+|+-+.+- ..+.++.+.|+ |||++.
T Consensus 189 Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~v~~~-~~~~g~D~vid~~g~------~~~~~~~~~l~-~~G~iv 260 (349)
T 3pi7_A 189 GFRPIVTVRRDEQIALLKDIGAAHVLNEKAPDFEATLREV-MKAEQPRIFLDAVTG------PLASAIFNAMP-KRARWI 260 (349)
T ss_dssp TCEEEEEESCGGGHHHHHHHTCSEEEETTSTTHHHHHHHH-HHHHCCCEEEESSCH------HHHHHHHHHSC-TTCEEE
T ss_pred CCEEEEEeCCHHHHHHHHHcCCCEEEECCcHHHHHHHHHH-hcCCCCcEEEECCCC------hhHHHHHhhhc-CCCEEE
Confidence 5699999999999999987532222222221111111111 112359999865553 23578889999 999998
Q ss_pred EEeC
Q 035840 85 AWTY 88 (213)
Q Consensus 85 ~~~~ 88 (213)
+...
T Consensus 261 ~~G~ 264 (349)
T 3pi7_A 261 IYGR 264 (349)
T ss_dssp ECCC
T ss_pred EEec
Confidence 7753
No 334
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=81.34 E-value=1.9 Score=35.17 Aligned_cols=84 Identities=13% Similarity=-0.017 Sum_probs=48.6
Q ss_pred CCeEEEEeCCHHHHHHhhcCCCceEEecCCCCcchhhccCCCCCCceeeeeechhhc---cCCh---------hHHHHHH
Q 035840 5 YKNVIATDTSPKQLEFAIKLPNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALH---WFDL---------PQFYKQV 72 (213)
Q Consensus 5 ~~~V~gvD~S~~ml~~Ar~~~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~h---w~d~---------~~~~~e~ 72 (213)
.+.|+++|+.|--. ..+ .++++|+ ... ...+.||+|+|=++=. -.|. +.++.=+
T Consensus 138 g~~VVavDL~~~~s-----da~-~~IqGD~-------~~~-~~~~k~DLVISDMAPNtTG~~D~d~~Rs~~L~ElALdfA 203 (344)
T 3r24_A 138 GTLLVDSDLNDFVS-----DAD-STLIGDC-------ATV-HTANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFI 203 (344)
T ss_dssp TCEEEEEESSCCBC-----SSS-EEEESCG-------GGE-EESSCEEEEEECCCCTTSCSSCSCCCCCCTHHHHHHHHH
T ss_pred CcEEEEeeCccccc-----CCC-eEEEccc-------ccc-ccCCCCCEEEecCCCCcCCccccchhHHHHHHHHHHHHH
Confidence 35788999876431 122 3467775 332 2246799999654432 1322 3455557
Q ss_pred HHHhcCCCeEEEEEeCCCCCcChHHHHhcccc
Q 035840 73 KWVLKKPNGVIAAWTYTMPEINESVGAVFKPF 104 (213)
Q Consensus 73 ~rvLk~pgG~l~~~~~~~~~~~~~~~~~~~~~ 104 (213)
.++|+ |||.|++=-+.... .+.+.++...|
T Consensus 204 ~~~Lk-pGGsFvVKVFQGsg-~~~L~~lrk~F 233 (344)
T 3r24_A 204 KQKLA-LGGSIAVKITEHSW-NADLYKLMGHF 233 (344)
T ss_dssp HHHEE-EEEEEEEEECSSSC-CHHHHHHHTTE
T ss_pred HHhCc-CCCEEEEEEecCCC-HHHHHHHHhhC
Confidence 88999 99999854443222 34455544433
No 335
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=81.27 E-value=3.8 Score=34.25 Aligned_cols=77 Identities=14% Similarity=0.079 Sum_probs=47.0
Q ss_pred eEEEEeCCHHHHHHhhcCCCceEEecCCCCcchhhccCCCCCCceeeeeechhhccCChhHHHHHHHHHh----cCCCeE
Q 035840 7 NVIATDTSPKQLEFAIKLPNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWFDLPQFYKQVKWVL----KKPNGV 82 (213)
Q Consensus 7 ~V~gvD~S~~ml~~Ar~~~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~d~~~~~~e~~rvL----k~pgG~ 82 (213)
+|+++|.|+.-++.|++..-........+.....+.+. .....+|+|+-+.+- ....+..+.++| + +||+
T Consensus 240 ~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~i~~~-t~g~g~D~vid~~g~----~~~~~~~~~~~l~~~~~-~~G~ 313 (404)
T 3ip1_A 240 KVILSEPSEVRRNLAKELGADHVIDPTKENFVEAVLDY-TNGLGAKLFLEATGV----PQLVWPQIEEVIWRARG-INAT 313 (404)
T ss_dssp EEEEECSCHHHHHHHHHHTCSEEECTTTSCHHHHHHHH-TTTCCCSEEEECSSC----HHHHHHHHHHHHHHCSC-CCCE
T ss_pred EEEEECCCHHHHHHHHHcCCCEEEcCCCCCHHHHHHHH-hCCCCCCEEEECCCC----cHHHHHHHHHHHHhccC-CCcE
Confidence 89999999999999998632222222221111112222 234469999855442 223566667777 9 9999
Q ss_pred EEEEeCC
Q 035840 83 IAAWTYT 89 (213)
Q Consensus 83 l~~~~~~ 89 (213)
+++....
T Consensus 314 iv~~G~~ 320 (404)
T 3ip1_A 314 VAIVARA 320 (404)
T ss_dssp EEECSCC
T ss_pred EEEeCCC
Confidence 9877654
No 336
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=80.95 E-value=0.98 Score=36.97 Aligned_cols=77 Identities=13% Similarity=0.018 Sum_probs=48.1
Q ss_pred CCeEEEEeCCHHHHHHhhcCCCceEEecCCCCcchhhccCCCCCCceeeeeechhhccCChhHHHHHHHHHhcCCCeEEE
Q 035840 5 YKNVIATDTSPKQLEFAIKLPNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWFDLPQFYKQVKWVLKKPNGVIA 84 (213)
Q Consensus 5 ~~~V~gvD~S~~ml~~Ar~~~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~d~~~~~~e~~rvLk~pgG~l~ 84 (213)
..+|+++|.|++.++.+++...........+.....+.+.. ..+.+|+|+-+..- ...+.++.++|+ |||+++
T Consensus 196 Ga~Vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~d~vi~~~g~-----~~~~~~~~~~l~-~~G~iv 268 (347)
T 1jvb_A 196 GATIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRIT-ESKGVDAVIDLNNS-----EKTLSVYPKALA-KQGKYV 268 (347)
T ss_dssp CCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHT-TTSCEEEEEESCCC-----HHHHTTGGGGEE-EEEEEE
T ss_pred CCeEEEEcCCHHHHHHHHHhCCCEEecCCCccHHHHHHHHh-cCCCceEEEECCCC-----HHHHHHHHHHHh-cCCEEE
Confidence 56899999999999998875221222211111111122221 11479999866542 457888999999 999998
Q ss_pred EEeC
Q 035840 85 AWTY 88 (213)
Q Consensus 85 ~~~~ 88 (213)
+...
T Consensus 269 ~~g~ 272 (347)
T 1jvb_A 269 MVGL 272 (347)
T ss_dssp ECCS
T ss_pred EECC
Confidence 7654
No 337
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=79.16 E-value=1.1 Score=36.63 Aligned_cols=42 Identities=21% Similarity=0.344 Sum_probs=29.8
Q ss_pred CCCCceeeeee----chh-------hccC-ChhHHHHHHHHHhcCCCeEEEEEeC
Q 035840 46 ATQSSVDLVTI----AAA-------LHWF-DLPQFYKQVKWVLKKPNGVIAAWTY 88 (213)
Q Consensus 46 ~~~~sfDlV~~----~~~-------~hw~-d~~~~~~e~~rvLk~pgG~l~~~~~ 88 (213)
+++++||+|+. +.. -.|. -....+.++.|+|+ |||.++++..
T Consensus 54 l~~~svDlI~tDPPY~~~~d~~~~~~~~~~~~~~~l~~~~rvLk-~~G~i~i~~~ 107 (319)
T 1eg2_A 54 LPDDSVQLIICDPPYNIMLADWDDHMDYIGWAKRWLAEAERVLS-PTGSIAIFGG 107 (319)
T ss_dssp SCTTCEEEEEECCCSBCCGGGGGTCSSHHHHHHHHHHHHHHHEE-EEEEEEEEEC
T ss_pred CccCCcCEEEECCCCCCCCCCccCHHHHHHHHHHHHHHHHHHcC-CCeEEEEEcC
Confidence 56789999992 221 0133 34677889999999 9999987644
No 338
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=77.73 E-value=3.9 Score=33.68 Aligned_cols=74 Identities=15% Similarity=0.053 Sum_probs=47.2
Q ss_pred eEEEEeCCHHHHHHhhcCCCceEEecC--CCCcchhhccCCCCCCceeeeeechhhccCChhHHHHHHHHHhcCCC-eEE
Q 035840 7 NVIATDTSPKQLEFAIKLPNIRYQLTP--PTMSITELEQNVATQSSVDLVTIAAALHWFDLPQFYKQVKWVLKKPN-GVI 83 (213)
Q Consensus 7 ~V~gvD~S~~ml~~Ar~~~~v~~~~~~--~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~d~~~~~~e~~rvLk~pg-G~l 83 (213)
+|+++|.|++-++.|++..-....... .+.....+.+. .++.+|+|+-+.+. ...+.++.++|+ || |++
T Consensus 218 ~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~--t~gg~Dvvid~~g~-----~~~~~~~~~~l~-~~~G~i 289 (373)
T 1p0f_A 218 RIIGVGTHKDKFPKAIELGATECLNPKDYDKPIYEVICEK--TNGGVDYAVECAGR-----IETMMNALQSTY-CGSGVT 289 (373)
T ss_dssp EEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHH--TTSCBSEEEECSCC-----HHHHHHHHHTBC-TTTCEE
T ss_pred eEEEECCCHHHHHHHHHcCCcEEEecccccchHHHHHHHH--hCCCCCEEEECCCC-----HHHHHHHHHHHh-cCCCEE
Confidence 799999999999999986321222111 01111112221 12369999855432 467899999999 99 999
Q ss_pred EEEeC
Q 035840 84 AAWTY 88 (213)
Q Consensus 84 ~~~~~ 88 (213)
.+...
T Consensus 290 v~~G~ 294 (373)
T 1p0f_A 290 VVLGL 294 (373)
T ss_dssp EECCC
T ss_pred EEEcc
Confidence 87654
No 339
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=77.64 E-value=1.9 Score=35.15 Aligned_cols=74 Identities=11% Similarity=0.062 Sum_probs=47.7
Q ss_pred CCeEEEEeCCHHHHHHhhcCCCceEEecCC-CCcchhhccCCCCCCceeeeeechhhccCChhHHHHHHHHHhcCCCeEE
Q 035840 5 YKNVIATDTSPKQLEFAIKLPNIRYQLTPP-TMSITELEQNVATQSSVDLVTIAAALHWFDLPQFYKQVKWVLKKPNGVI 83 (213)
Q Consensus 5 ~~~V~gvD~S~~ml~~Ar~~~~v~~~~~~~-~~~~~d~~~~~~~~~sfDlV~~~~~~hw~d~~~~~~e~~rvLk~pgG~l 83 (213)
..+|+++|.|++-++.+++..-........ + ...+++. ....+|+|+-+... ...+.++.++|+ |||++
T Consensus 196 Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~---~~~~~~~-~g~g~D~vid~~g~-----~~~~~~~~~~l~-~~G~i 265 (344)
T 2h6e_A 196 NITIVGISRSKKHRDFALELGADYVSEMKDAE---SLINKLT-DGLGASIAIDLVGT-----EETTYNLGKLLA-QEGAI 265 (344)
T ss_dssp TCEEEEECSCHHHHHHHHHHTCSEEECHHHHH---HHHHHHH-TTCCEEEEEESSCC-----HHHHHHHHHHEE-EEEEE
T ss_pred CCEEEEEeCCHHHHHHHHHhCCCEEeccccch---HHHHHhh-cCCCccEEEECCCC-----hHHHHHHHHHhh-cCCEE
Confidence 468999999999999998753212221100 0 0011211 13369999966543 457899999999 99999
Q ss_pred EEEeC
Q 035840 84 AAWTY 88 (213)
Q Consensus 84 ~~~~~ 88 (213)
.+...
T Consensus 266 v~~g~ 270 (344)
T 2h6e_A 266 ILVGM 270 (344)
T ss_dssp EECCC
T ss_pred EEeCC
Confidence 87654
No 340
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=77.59 E-value=4.4 Score=33.39 Aligned_cols=74 Identities=11% Similarity=0.001 Sum_probs=46.9
Q ss_pred eEEEEeCCHHHHHHhhcCCCceEEecCC--CCcchhhccCCCCCCceeeeeechhhccCChhHHHHHHHHHhcCCC-eEE
Q 035840 7 NVIATDTSPKQLEFAIKLPNIRYQLTPP--TMSITELEQNVATQSSVDLVTIAAALHWFDLPQFYKQVKWVLKKPN-GVI 83 (213)
Q Consensus 7 ~V~gvD~S~~ml~~Ar~~~~v~~~~~~~--~~~~~d~~~~~~~~~sfDlV~~~~~~hw~d~~~~~~e~~rvLk~pg-G~l 83 (213)
+|+++|.|++-++.+++..-........ +.....+.+. .++.+|+|+-+..- ...+.++.++|+ +| |++
T Consensus 218 ~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~--~~~g~D~vid~~g~-----~~~~~~~~~~l~-~~~G~i 289 (374)
T 2jhf_A 218 RIIGVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEM--SNGGVDFSFEVIGR-----LDTMVTALSCCQ-EAYGVS 289 (374)
T ss_dssp EEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHH--TTSCBSEEEECSCC-----HHHHHHHHHHBC-TTTCEE
T ss_pred eEEEEcCCHHHHHHHHHhCCceEecccccchhHHHHHHHH--hCCCCcEEEECCCC-----HHHHHHHHHHhh-cCCcEE
Confidence 7999999999999998763212221110 1111112221 12369999855432 467899999999 99 999
Q ss_pred EEEeC
Q 035840 84 AAWTY 88 (213)
Q Consensus 84 ~~~~~ 88 (213)
.+...
T Consensus 290 v~~G~ 294 (374)
T 2jhf_A 290 VIVGV 294 (374)
T ss_dssp EECSC
T ss_pred EEecc
Confidence 87654
No 341
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=77.44 E-value=3 Score=34.37 Aligned_cols=75 Identities=17% Similarity=0.118 Sum_probs=47.1
Q ss_pred eEEEEeCCHHHHHHhhcCCCceEEecC--CCCcchhhccCCCCCCceeeeeechhhccCChhHHHHHHHHHhcCCC-eEE
Q 035840 7 NVIATDTSPKQLEFAIKLPNIRYQLTP--PTMSITELEQNVATQSSVDLVTIAAALHWFDLPQFYKQVKWVLKKPN-GVI 83 (213)
Q Consensus 7 ~V~gvD~S~~ml~~Ar~~~~v~~~~~~--~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~d~~~~~~e~~rvLk~pg-G~l 83 (213)
+|+++|.|++-++.+++..-....... .+.....+.+. .++.+|+|+-+... ...+..+.++|+ || |++
T Consensus 219 ~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~--~~~g~D~vid~~g~-----~~~~~~~~~~l~-~~~G~i 290 (374)
T 1cdo_A 219 RIIAVDLNPDKFEKAKVFGATDFVNPNDHSEPISQVLSKM--TNGGVDFSLECVGN-----VGVMRNALESCL-KGWGVS 290 (374)
T ss_dssp EEEEECSCGGGHHHHHHTTCCEEECGGGCSSCHHHHHHHH--HTSCBSEEEECSCC-----HHHHHHHHHTBC-TTTCEE
T ss_pred EEEEEcCCHHHHHHHHHhCCceEEeccccchhHHHHHHHH--hCCCCCEEEECCCC-----HHHHHHHHHHhh-cCCcEE
Confidence 799999999999999976321222111 01111111111 12369999855432 467899999999 99 999
Q ss_pred EEEeCC
Q 035840 84 AAWTYT 89 (213)
Q Consensus 84 ~~~~~~ 89 (213)
.+....
T Consensus 291 v~~G~~ 296 (374)
T 1cdo_A 291 VLVGWT 296 (374)
T ss_dssp EECSCC
T ss_pred EEEcCC
Confidence 876543
No 342
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=77.42 E-value=1.9 Score=34.76 Aligned_cols=43 Identities=19% Similarity=0.254 Sum_probs=30.1
Q ss_pred CCceeeeeechhh----cc----CChhH----HHHHHHHHhcCCCeEEEEEeCCCC
Q 035840 48 QSSVDLVTIAAAL----HW----FDLPQ----FYKQVKWVLKKPNGVIAAWTYTMP 91 (213)
Q Consensus 48 ~~sfDlV~~~~~~----hw----~d~~~----~~~e~~rvLk~pgG~l~~~~~~~~ 91 (213)
.+.+|+|++.++- |. .|+.. ++.-+.++|+ |||.|++-.|+-.
T Consensus 204 ~~k~DvV~SDMApn~sGh~yqQC~DHarii~Lal~fA~~vLk-PGGtfV~Kvygga 258 (320)
T 2hwk_A 204 VPKYDIIFVNVRTPYKYHHYQQCEDHAIKLSMLTKKACLHLN-PGGTCVSIGYGYA 258 (320)
T ss_dssp SCCEEEEEEECCCCCCSCHHHHHHHHHHHHHHTHHHHGGGEE-EEEEEEEEECCCC
T ss_pred cCcCCEEEEcCCCCCCCccccccchHHHHHHHHHHHHHHhcC-CCceEEEEEecCC
Confidence 3669999987765 44 24444 4466778899 9999986666544
No 343
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=76.45 E-value=1.8 Score=35.77 Aligned_cols=73 Identities=21% Similarity=0.172 Sum_probs=47.4
Q ss_pred CCeEEEEeCCHHHHHHhhcCCCceEEecCCCCcchhhccCCCCCCceeeeeechhhccCChhHHHHHHHHHhcCCCeEEE
Q 035840 5 YKNVIATDTSPKQLEFAIKLPNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWFDLPQFYKQVKWVLKKPNGVIA 84 (213)
Q Consensus 5 ~~~V~gvD~S~~ml~~Ar~~~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~d~~~~~~e~~rvLk~pgG~l~ 84 (213)
..+|+++|.|++.++.+++..-........+ ...++.. +.+|+|+-+.+- ...+.++.++|+ |||++.
T Consensus 218 Ga~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~---~~~~~~~---~g~Dvvid~~g~-----~~~~~~~~~~l~-~~G~iv 285 (369)
T 1uuf_A 218 GAHVVAFTTSEAKREAAKALGADEVVNSRNA---DEMAAHL---KSFDFILNTVAA-----PHNLDDFTTLLK-RDGTMT 285 (369)
T ss_dssp TCEEEEEESSGGGHHHHHHHTCSEEEETTCH---HHHHTTT---TCEEEEEECCSS-----CCCHHHHHTTEE-EEEEEE
T ss_pred CCEEEEEeCCHHHHHHHHHcCCcEEeccccH---HHHHHhh---cCCCEEEECCCC-----HHHHHHHHHHhc-cCCEEE
Confidence 4589999999999999987532222222110 0112221 469999865443 345788899999 999997
Q ss_pred EEeCC
Q 035840 85 AWTYT 89 (213)
Q Consensus 85 ~~~~~ 89 (213)
+....
T Consensus 286 ~~G~~ 290 (369)
T 1uuf_A 286 LVGAP 290 (369)
T ss_dssp ECCCC
T ss_pred EeccC
Confidence 66543
No 344
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=75.99 E-value=3.5 Score=33.97 Aligned_cols=74 Identities=16% Similarity=0.007 Sum_probs=46.8
Q ss_pred eEEEEeCCHHHHHHhhcCCCceEEecC--CCCcchhhccCCCCCCceeeeeechhhccCChhHHHHHHHHHhcCCC-eEE
Q 035840 7 NVIATDTSPKQLEFAIKLPNIRYQLTP--PTMSITELEQNVATQSSVDLVTIAAALHWFDLPQFYKQVKWVLKKPN-GVI 83 (213)
Q Consensus 7 ~V~gvD~S~~ml~~Ar~~~~v~~~~~~--~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~d~~~~~~e~~rvLk~pg-G~l 83 (213)
+|+++|.|++-++.|+++.-....... .+.....+.+. .++.+|+|+-+..- ...+.++.+.|+ +| |++
T Consensus 222 ~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~v~~~--~~~g~Dvvid~~G~-----~~~~~~~~~~l~-~~~G~i 293 (376)
T 1e3i_A 222 RIIAIDINGEKFPKAKALGATDCLNPRELDKPVQDVITEL--TAGGVDYSLDCAGT-----AQTLKAAVDCTV-LGWGSC 293 (376)
T ss_dssp EEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHH--HTSCBSEEEESSCC-----HHHHHHHHHTBC-TTTCEE
T ss_pred eEEEEcCCHHHHHHHHHhCCcEEEccccccchHHHHHHHH--hCCCccEEEECCCC-----HHHHHHHHHHhh-cCCCEE
Confidence 799999999999999876321222111 01111111111 12369999855432 467899999999 99 999
Q ss_pred EEEeC
Q 035840 84 AAWTY 88 (213)
Q Consensus 84 ~~~~~ 88 (213)
.+...
T Consensus 294 v~~G~ 298 (376)
T 1e3i_A 294 TVVGA 298 (376)
T ss_dssp EECCC
T ss_pred EEECC
Confidence 87654
No 345
>2km1_A Protein DRE2; yeast, antiapoptotic, protein binding; NMR {Saccharomyces cerevisiae}
Probab=75.60 E-value=2.1 Score=30.53 Aligned_cols=40 Identities=15% Similarity=0.099 Sum_probs=30.4
Q ss_pred CCCCCceeeeeechhh--ccC-ChhHHHHHHHHHhcCCCeEEEE
Q 035840 45 VATQSSVDLVTIAAAL--HWF-DLPQFYKQVKWVLKKPNGVIAA 85 (213)
Q Consensus 45 ~~~~~sfDlV~~~~~~--hw~-d~~~~~~e~~rvLk~pgG~l~~ 85 (213)
.+++++||.|+...-- ... =+.+++..+++.|| |||.|.-
T Consensus 54 sLp~stYD~V~~lt~~~~~~~~l~r~li~~l~~aLk-pgG~L~g 96 (136)
T 2km1_A 54 TLENAKYETVHYLTPEAQTDIKFPKKLISVLADSLK-PNGSLIG 96 (136)
T ss_dssp CCCSSSCCSEEEECCCSSCSCCCCHHHHHHHHTTCC-TTCCEEC
T ss_pred cCCcccccEEEEecCCccchhhcCHHHHHHHHHHhC-CCCEEEe
Confidence 4889999999944321 212 24899999999999 9999954
No 346
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=75.40 E-value=4.4 Score=33.47 Aligned_cols=55 Identities=13% Similarity=0.181 Sum_probs=36.0
Q ss_pred CCeEEEEeCCHHHHHHhhcC--CCceEEecCCCCcchhhccCCCCCCceeeeeechhh
Q 035840 5 YKNVIATDTSPKQLEFAIKL--PNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAAL 60 (213)
Q Consensus 5 ~~~V~gvD~S~~ml~~Ar~~--~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~ 60 (213)
.++|+|+|.++.+++.|++. .++.++.++.+.+..-+.+..+. +++|.|+.-..+
T Consensus 82 ~GrVig~D~Dp~Al~~A~rL~~~Rv~lv~~nF~~l~~~L~~~g~~-~~vDgILfDLGV 138 (347)
T 3tka_A 82 EGRLLAIDRDPQAIAVAKTIDDPRFSIIHGPFSALGEYVAERDLI-GKIDGILLDLGV 138 (347)
T ss_dssp TCEEEEEESCHHHHHHHTTCCCTTEEEEESCGGGHHHHHHHTTCT-TCEEEEEEECSC
T ss_pred CCEEEEEECCHHHHHHHHhhcCCcEEEEeCCHHHHHHHHHhcCCC-CcccEEEECCcc
Confidence 36899999999999999653 45777777663332222332222 369999855444
No 347
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=75.31 E-value=7.6 Score=31.37 Aligned_cols=77 Identities=17% Similarity=0.086 Sum_probs=48.0
Q ss_pred CeEEEEeCCHHHHHHhhcCCCceEEecCCCCcchhhccCCCCCCceeeeeechhhccCChhHHHHHHHHHhcCCCeEEEE
Q 035840 6 KNVIATDTSPKQLEFAIKLPNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWFDLPQFYKQVKWVLKKPNGVIAA 85 (213)
Q Consensus 6 ~~V~gvD~S~~ml~~Ar~~~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~d~~~~~~e~~rvLk~pgG~l~~ 85 (213)
..|+++|.|++-++.|+++.-.......-+........+ -....+|+|+-+.. ...++..+.++|+ |||++.+
T Consensus 186 ~~vi~~~~~~~k~~~a~~lGa~~~i~~~~~~~~~~~~~~-~~~~g~d~v~d~~G-----~~~~~~~~~~~l~-~~G~~v~ 258 (346)
T 4a2c_A 186 KSVTAIDISSEKLALAKSFGAMQTFNSSEMSAPQMQSVL-RELRFNQLILETAG-----VPQTVELAVEIAG-PHAQLAL 258 (346)
T ss_dssp SEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHH-GGGCSSEEEEECSC-----SHHHHHHHHHHCC-TTCEEEE
T ss_pred cEEEEEechHHHHHHHHHcCCeEEEeCCCCCHHHHHHhh-cccCCccccccccc-----ccchhhhhhheec-CCeEEEE
Confidence 467899999999999998743333332211100001111 12345787775432 3578899999999 9999987
Q ss_pred EeCC
Q 035840 86 WTYT 89 (213)
Q Consensus 86 ~~~~ 89 (213)
....
T Consensus 259 ~g~~ 262 (346)
T 4a2c_A 259 VGTL 262 (346)
T ss_dssp CCCC
T ss_pred Eecc
Confidence 7654
No 348
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=74.71 E-value=4 Score=33.60 Aligned_cols=75 Identities=12% Similarity=0.024 Sum_probs=47.1
Q ss_pred eEEEEeCCHHHHHHhhcCCCceEEecC--CCCcchhhccCCCCCCceeeeeechhhccCChhHHHHHHHHHhcCCC-eEE
Q 035840 7 NVIATDTSPKQLEFAIKLPNIRYQLTP--PTMSITELEQNVATQSSVDLVTIAAALHWFDLPQFYKQVKWVLKKPN-GVI 83 (213)
Q Consensus 7 ~V~gvD~S~~ml~~Ar~~~~v~~~~~~--~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~d~~~~~~e~~rvLk~pg-G~l 83 (213)
+|+++|.|++-++.+++..-....... .+.....+.+. .++.+|+|+-+... ...+.++.+.|+ || |++
T Consensus 217 ~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~v~~~--~~~g~D~vid~~g~-----~~~~~~~~~~l~-~~~G~i 288 (373)
T 2fzw_A 217 RIIGVDINKDKFARAKEFGATECINPQDFSKPIQEVLIEM--TDGGVDYSFECIGN-----VKVMRAALEACH-KGWGVS 288 (373)
T ss_dssp EEEEECSCGGGHHHHHHHTCSEEECGGGCSSCHHHHHHHH--TTSCBSEEEECSCC-----HHHHHHHHHTBC-TTTCEE
T ss_pred eEEEEcCCHHHHHHHHHcCCceEeccccccccHHHHHHHH--hCCCCCEEEECCCc-----HHHHHHHHHhhc-cCCcEE
Confidence 799999999999999875221222111 01111112221 12369999855432 467899999999 99 999
Q ss_pred EEEeCC
Q 035840 84 AAWTYT 89 (213)
Q Consensus 84 ~~~~~~ 89 (213)
.+....
T Consensus 289 v~~G~~ 294 (373)
T 2fzw_A 289 VVVGVA 294 (373)
T ss_dssp EECSCC
T ss_pred EEEecC
Confidence 876543
No 349
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=72.88 E-value=2 Score=33.78 Aligned_cols=22 Identities=14% Similarity=0.184 Sum_probs=18.2
Q ss_pred hhHHHHHHHHHhcCCCeEEEEEe
Q 035840 65 LPQFYKQVKWVLKKPNGVIAAWT 87 (213)
Q Consensus 65 ~~~~~~e~~rvLk~pgG~l~~~~ 87 (213)
....+.++.|+|+ |||.++++.
T Consensus 53 ~~~~l~~~~~~Lk-~~g~i~v~~ 74 (260)
T 1g60_A 53 TYRWIDKVLDKLD-KDGSLYIFN 74 (260)
T ss_dssp HHHHHHHHHHHEE-EEEEEEEEE
T ss_pred HHHHHHHHHHHhc-CCeEEEEEc
Confidence 3567889999999 999987763
No 350
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=72.15 E-value=6.4 Score=31.64 Aligned_cols=75 Identities=9% Similarity=-0.023 Sum_probs=46.1
Q ss_pred cCCeEEEEeCCHHHHHHhhcCCCceEEecCCCCcchhhccCCCCCCceeeeeechhhccCChhHHHHHHHHHhcCCCeEE
Q 035840 4 IYKNVIATDTSPKQLEFAIKLPNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWFDLPQFYKQVKWVLKKPNGVI 83 (213)
Q Consensus 4 ~~~~V~gvD~S~~ml~~Ar~~~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~d~~~~~~e~~rvLk~pgG~l 83 (213)
...+|++++.|++-++.+++..-.......... ...+.. ...+.+|+|+-+.+- ..+.++.++|+ +||++
T Consensus 173 ~Ga~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~-~~~~~~--~~~~~~d~vid~~g~------~~~~~~~~~l~-~~G~~ 242 (328)
T 1xa0_A 173 RGYTVEASTGKAAEHDYLRVLGAKEVLAREDVM-AERIRP--LDKQRWAAAVDPVGG------RTLATVLSRMR-YGGAV 242 (328)
T ss_dssp TTCCEEEEESCTTCHHHHHHTTCSEEEECC------------CCSCCEEEEEECSTT------TTHHHHHHTEE-EEEEE
T ss_pred CCCEEEEEECCHHHHHHHHHcCCcEEEecCCcH-HHHHHH--hcCCcccEEEECCcH------HHHHHHHHhhc-cCCEE
Confidence 356899999999999999876321122111100 000122 233469999866542 35788999999 99999
Q ss_pred EEEeC
Q 035840 84 AAWTY 88 (213)
Q Consensus 84 ~~~~~ 88 (213)
.+...
T Consensus 243 v~~G~ 247 (328)
T 1xa0_A 243 AVSGL 247 (328)
T ss_dssp EECSC
T ss_pred EEEee
Confidence 87654
No 351
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=71.61 E-value=2.2 Score=34.26 Aligned_cols=64 Identities=19% Similarity=-0.025 Sum_probs=42.0
Q ss_pred CCeEEEEeCCHHHHHHhhcCCCceEEecCCCCcchhhccCCCCCCceeeeeechhhccCChhHHHHHHHHHhcCCCeEEE
Q 035840 5 YKNVIATDTSPKQLEFAIKLPNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWFDLPQFYKQVKWVLKKPNGVIA 84 (213)
Q Consensus 5 ~~~V~gvD~S~~ml~~Ar~~~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~d~~~~~~e~~rvLk~pgG~l~ 84 (213)
..+|++++ |++-++.+++. +......+ .+++ .+.+|+|+-+.+- ..+.++.++|+ |||++.
T Consensus 166 Ga~Vi~~~-~~~~~~~~~~l-Ga~~v~~d-------~~~v---~~g~Dvv~d~~g~------~~~~~~~~~l~-~~G~~v 226 (315)
T 3goh_A 166 GYVVDLVS-ASLSQALAAKR-GVRHLYRE-------PSQV---TQKYFAIFDAVNS------QNAAALVPSLK-ANGHII 226 (315)
T ss_dssp TCEEEEEC-SSCCHHHHHHH-TEEEEESS-------GGGC---CSCEEEEECC-------------TTGGGEE-EEEEEE
T ss_pred CCEEEEEE-ChhhHHHHHHc-CCCEEEcC-------HHHh---CCCccEEEECCCc------hhHHHHHHHhc-CCCEEE
Confidence 45999999 99999999886 33333322 1444 5679999955443 12356789999 999998
Q ss_pred EEe
Q 035840 85 AWT 87 (213)
Q Consensus 85 ~~~ 87 (213)
...
T Consensus 227 ~~g 229 (315)
T 3goh_A 227 CIQ 229 (315)
T ss_dssp EEC
T ss_pred EEe
Confidence 664
No 352
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=70.52 E-value=6.1 Score=32.30 Aligned_cols=76 Identities=12% Similarity=0.157 Sum_probs=47.7
Q ss_pred eEEEEeCCHHHHHHhhcCC-Cc-eEEecC--CCCcchhhccCCCCCCceeeeeechhhccCChhHHHHHHHHHhcCCCeE
Q 035840 7 NVIATDTSPKQLEFAIKLP-NI-RYQLTP--PTMSITELEQNVATQSSVDLVTIAAALHWFDLPQFYKQVKWVLKKPNGV 82 (213)
Q Consensus 7 ~V~gvD~S~~ml~~Ar~~~-~v-~~~~~~--~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~d~~~~~~e~~rvLk~pgG~ 82 (213)
+|+++|.|++-++.|++.. .+ .+...+ .+.....+.+. .....+|+|+-+.+ -+..+..+.++|+ |||+
T Consensus 206 ~Vi~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~v~~~-t~g~g~Dvvid~~g-----~~~~~~~~~~~l~-~~G~ 278 (363)
T 3m6i_A 206 PLVITDIDEGRLKFAKEICPEVVTHKVERLSAEESAKKIVES-FGGIEPAVALECTG-----VESSIAAAIWAVK-FGGK 278 (363)
T ss_dssp SEEEEESCHHHHHHHHHHCTTCEEEECCSCCHHHHHHHHHHH-TSSCCCSEEEECSC-----CHHHHHHHHHHSC-TTCE
T ss_pred EEEEECCCHHHHHHHHHhchhcccccccccchHHHHHHHHHH-hCCCCCCEEEECCC-----ChHHHHHHHHHhc-CCCE
Confidence 4999999999999999762 11 222111 10000111111 23456999986544 2457899999999 9999
Q ss_pred EEEEeCC
Q 035840 83 IAAWTYT 89 (213)
Q Consensus 83 l~~~~~~ 89 (213)
+.+....
T Consensus 279 iv~~G~~ 285 (363)
T 3m6i_A 279 VFVIGVG 285 (363)
T ss_dssp EEECCCC
T ss_pred EEEEccC
Confidence 9877654
No 353
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=68.58 E-value=12 Score=31.68 Aligned_cols=77 Identities=13% Similarity=0.076 Sum_probs=48.0
Q ss_pred cCCeEEEEeCCHHHHHHhhcCCCceEEecCCCCc-----------------chhhccCCCCCCceeeeeechhhccCChh
Q 035840 4 IYKNVIATDTSPKQLEFAIKLPNIRYQLTPPTMS-----------------ITELEQNVATQSSVDLVTIAAALHWFDLP 66 (213)
Q Consensus 4 ~~~~V~gvD~S~~ml~~Ar~~~~v~~~~~~~~~~-----------------~~d~~~~~~~~~sfDlV~~~~~~hw~d~~ 66 (213)
..++|++++.|++-++.+++..-........+.. ...+.+. .....+|+|+-+.+-
T Consensus 252 ~Ga~vi~~~~~~~~~~~~~~lGa~~vi~~~~~d~~~~~~~~~~~~~~~~~~~~~i~~~-t~g~g~Dvvid~~G~------ 324 (456)
T 3krt_A 252 GGANPICVVSSPQKAEICRAMGAEAIIDRNAEGYRFWKDENTQDPKEWKRFGKRIREL-TGGEDIDIVFEHPGR------ 324 (456)
T ss_dssp TTCEEEEEESSHHHHHHHHHHTCCEEEETTTTTCCSEEETTEECHHHHHHHHHHHHHH-HTSCCEEEEEECSCH------
T ss_pred cCCeEEEEECCHHHHHHHHhhCCcEEEecCcCcccccccccccchHHHHHHHHHHHHH-hCCCCCcEEEEcCCc------
Confidence 3568999999999999998753222222111000 0011111 123469999865442
Q ss_pred HHHHHHHHHhcCCCeEEEEEeC
Q 035840 67 QFYKQVKWVLKKPNGVIAAWTY 88 (213)
Q Consensus 67 ~~~~e~~rvLk~pgG~l~~~~~ 88 (213)
..+..+.++|+ |||++++...
T Consensus 325 ~~~~~~~~~l~-~~G~iv~~G~ 345 (456)
T 3krt_A 325 ETFGASVFVTR-KGGTITTCAS 345 (456)
T ss_dssp HHHHHHHHHEE-EEEEEEESCC
T ss_pred hhHHHHHHHhh-CCcEEEEEec
Confidence 57889999999 9999987654
No 354
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=66.59 E-value=4 Score=32.47 Aligned_cols=70 Identities=17% Similarity=0.111 Sum_probs=44.8
Q ss_pred cCCeEEEEeCCHHHHHHhhcCCCceEEecCCCCcc-hhhccCCCCCCceeeeeechhhccCChhHHHHHHHHHhcCCCeE
Q 035840 4 IYKNVIATDTSPKQLEFAIKLPNIRYQLTPPTMSI-TELEQNVATQSSVDLVTIAAALHWFDLPQFYKQVKWVLKKPNGV 82 (213)
Q Consensus 4 ~~~~V~gvD~S~~ml~~Ar~~~~v~~~~~~~~~~~-~d~~~~~~~~~sfDlV~~~~~~hw~d~~~~~~e~~rvLk~pgG~ 82 (213)
...+|+++|.|++.++.+++.. ........ . .++.+. + +.+|+|+- .+- ..+.++.++|+ |||+
T Consensus 149 ~Ga~Vi~~~~~~~~~~~~~~~g-a~~~~~~~---~~~~~~~~-~--~~~d~vid-~g~------~~~~~~~~~l~-~~G~ 213 (302)
T 1iz0_A 149 MGLRVLAAASRPEKLALPLALG-AEEAATYA---EVPERAKA-W--GGLDLVLE-VRG------KEVEESLGLLA-HGGR 213 (302)
T ss_dssp TTCEEEEEESSGGGSHHHHHTT-CSEEEEGG---GHHHHHHH-T--TSEEEEEE-CSC------TTHHHHHTTEE-EEEE
T ss_pred CCCEEEEEeCCHHHHHHHHhcC-CCEEEECC---cchhHHHH-h--cCceEEEE-CCH------HHHHHHHHhhc-cCCE
Confidence 3569999999999999988763 22221100 0 111111 1 46999987 442 46789999999 9999
Q ss_pred EEEEeC
Q 035840 83 IAAWTY 88 (213)
Q Consensus 83 l~~~~~ 88 (213)
+.....
T Consensus 214 ~v~~g~ 219 (302)
T 1iz0_A 214 LVYIGA 219 (302)
T ss_dssp EEEC--
T ss_pred EEEEeC
Confidence 876643
No 355
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=66.56 E-value=13 Score=25.65 Aligned_cols=80 Identities=9% Similarity=-0.008 Sum_probs=50.4
Q ss_pred ccCCeEEEEeCCHHHHHHhhcCCCceEEecCCCCcchhhccCCCCCCceeeeeechhhccCChhHHHHHHHHHhcCCCeE
Q 035840 3 KIYKNVIATDTSPKQLEFAIKLPNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWFDLPQFYKQVKWVLKKPNGV 82 (213)
Q Consensus 3 ~~~~~V~gvD~S~~ml~~Ar~~~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~d~~~~~~e~~rvLk~pgG~ 82 (213)
....+|+++|.+++.++.+++. ++.+..+++... ..++.. .-..+|+|+++..-.- -........|-+. |+..
T Consensus 28 ~~g~~v~vid~~~~~~~~~~~~-g~~~i~gd~~~~-~~l~~a--~i~~ad~vi~~~~~~~--~n~~~~~~a~~~~-~~~~ 100 (140)
T 3fwz_A 28 ASDIPLVVIETSRTRVDELRER-GVRAVLGNAANE-EIMQLA--HLECAKWLILTIPNGY--EAGEIVASARAKN-PDIE 100 (140)
T ss_dssp HTTCCEEEEESCHHHHHHHHHT-TCEEEESCTTSH-HHHHHT--TGGGCSEEEECCSCHH--HHHHHHHHHHHHC-SSSE
T ss_pred HCCCCEEEEECCHHHHHHHHHc-CCCEEECCCCCH-HHHHhc--CcccCCEEEEECCChH--HHHHHHHHHHHHC-CCCe
Confidence 4567999999999999998874 677788877321 112222 2345888887654321 1122445677788 8887
Q ss_pred EEEEeCC
Q 035840 83 IAAWTYT 89 (213)
Q Consensus 83 l~~~~~~ 89 (213)
++....+
T Consensus 101 iiar~~~ 107 (140)
T 3fwz_A 101 IIARAHY 107 (140)
T ss_dssp EEEEESS
T ss_pred EEEEECC
Confidence 7654443
No 356
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=65.46 E-value=7.6 Score=31.53 Aligned_cols=74 Identities=15% Similarity=0.003 Sum_probs=47.8
Q ss_pred cCCeEEEEeCCHHHHHHhhcCCCceEEecCCCCcchhhccCCCCCCceeeeeechhhccCChhHHHHHHHHHhcCCCeEE
Q 035840 4 IYKNVIATDTSPKQLEFAIKLPNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWFDLPQFYKQVKWVLKKPNGVI 83 (213)
Q Consensus 4 ~~~~V~gvD~S~~ml~~Ar~~~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~d~~~~~~e~~rvLk~pgG~l 83 (213)
...+|+++ .|++-++.+++.. ..... ..+.....+.+. .....+|+|+-+.+- ..+..+.+.|+ |||++
T Consensus 174 ~Ga~Vi~~-~~~~~~~~~~~lG-a~~i~-~~~~~~~~~~~~-~~~~g~D~vid~~g~------~~~~~~~~~l~-~~G~i 242 (343)
T 3gaz_A 174 RGARVFAT-ARGSDLEYVRDLG-ATPID-ASREPEDYAAEH-TAGQGFDLVYDTLGG------PVLDASFSAVK-RFGHV 242 (343)
T ss_dssp TTCEEEEE-ECHHHHHHHHHHT-SEEEE-TTSCHHHHHHHH-HTTSCEEEEEESSCT------HHHHHHHHHEE-EEEEE
T ss_pred CCCEEEEE-eCHHHHHHHHHcC-CCEec-cCCCHHHHHHHH-hcCCCceEEEECCCc------HHHHHHHHHHh-cCCeE
Confidence 35689999 9999999998763 33332 222111112221 133469999965542 57889999999 99999
Q ss_pred EEEeC
Q 035840 84 AAWTY 88 (213)
Q Consensus 84 ~~~~~ 88 (213)
.+...
T Consensus 243 v~~g~ 247 (343)
T 3gaz_A 243 VSCLG 247 (343)
T ss_dssp EESCC
T ss_pred EEEcc
Confidence 76543
No 357
>3trk_A Nonstructural polyprotein; hydrolase; 2.40A {Chikungunya virus}
Probab=63.71 E-value=2.7 Score=33.58 Aligned_cols=42 Identities=26% Similarity=0.362 Sum_probs=29.9
Q ss_pred Cceeeeeechhh----ccC----ChhHHH----HHHHHHhcCCCeEEEEEeCCCC
Q 035840 49 SSVDLVTIAAAL----HWF----DLPQFY----KQVKWVLKKPNGVIAAWTYTMP 91 (213)
Q Consensus 49 ~sfDlV~~~~~~----hw~----d~~~~~----~e~~rvLk~pgG~l~~~~~~~~ 91 (213)
+.||+|+++..- |+. |+..-+ ..+.+.|+ |||.+++..|+--
T Consensus 210 grYDlVfvNv~TpyR~HHYQQCeDHA~~l~mL~~~al~~L~-pGGtlv~~aYGyA 263 (324)
T 3trk_A 210 GRYDLVVINIHTPFRIHHYQQCVDHAMKLQMLGGDSLRLLK-PGGSLLIRAYGYA 263 (324)
T ss_dssp CCEEEEEEECCCCCCSSHHHHHHHHHHHHHHHHHHGGGGEE-EEEEEEEEECCCC
T ss_pred CceeEEEEecCCccccchHHHHHHHHHHHHHHHHHHHhhcC-CCceEEEEeeccc
Confidence 789999977654 322 554333 45567899 9999998888743
No 358
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=63.69 E-value=4 Score=32.80 Aligned_cols=33 Identities=27% Similarity=0.460 Sum_probs=26.0
Q ss_pred echhhc-cC-----ChhHHHHHHHHHhcCCCeEEEEEeCC
Q 035840 56 IAAALH-WF-----DLPQFYKQVKWVLKKPNGVIAAWTYT 89 (213)
Q Consensus 56 ~~~~~h-w~-----d~~~~~~e~~rvLk~pgG~l~~~~~~ 89 (213)
..|++. .+ ....++..+.++|+ |||++++.++.
T Consensus 197 ~FQAlRI~VN~EL~~L~~~L~~a~~~L~-~gGrl~visfH 235 (285)
T 1wg8_A 197 TFQALRIYVNDELNALKEFLEQAAEVLA-PGGRLVVIAFH 235 (285)
T ss_dssp HHHHHHHHHTTHHHHHHHHHHHHHHHEE-EEEEEEEEECS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCEEEEEecC
Confidence 466775 33 34688899999999 99999988876
No 359
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=62.92 E-value=10 Score=30.38 Aligned_cols=75 Identities=9% Similarity=-0.005 Sum_probs=46.8
Q ss_pred CCeEEEEeCCHHHHHHhhcCCCceEEecCCCCcchhhccCCCCCCceeeeeechhhccCChhHHHHHHHHHhcCCCeEEE
Q 035840 5 YKNVIATDTSPKQLEFAIKLPNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWFDLPQFYKQVKWVLKKPNGVIA 84 (213)
Q Consensus 5 ~~~V~gvD~S~~ml~~Ar~~~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~d~~~~~~e~~rvLk~pgG~l~ 84 (213)
..+|++++.|++-++.+++............. ...+.. ...+.+|+|+-+.+- ..+.++.++|+ |||++.
T Consensus 175 Ga~vi~~~~~~~~~~~~~~lGa~~v~~~~~~~-~~~~~~--~~~~~~d~vid~~g~------~~~~~~~~~l~-~~G~iv 244 (330)
T 1tt7_A 175 GYDVVASTGNREAADYLKQLGASEVISREDVY-DGTLKA--LSKQQWQGAVDPVGG------KQLASLLSKIQ-YGGSVA 244 (330)
T ss_dssp TCCEEEEESSSSTHHHHHHHTCSEEEEHHHHC-SSCCCS--SCCCCEEEEEESCCT------HHHHHHHTTEE-EEEEEE
T ss_pred CCEEEEEeCCHHHHHHHHHcCCcEEEECCCch-HHHHHH--hhcCCccEEEECCcH------HHHHHHHHhhc-CCCEEE
Confidence 56899999999988888875221111110000 000111 233469999866542 47889999999 999998
Q ss_pred EEeCC
Q 035840 85 AWTYT 89 (213)
Q Consensus 85 ~~~~~ 89 (213)
+....
T Consensus 245 ~~G~~ 249 (330)
T 1tt7_A 245 VSGLT 249 (330)
T ss_dssp ECCCS
T ss_pred EEecC
Confidence 76543
No 360
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=62.74 E-value=5.9 Score=31.45 Aligned_cols=43 Identities=7% Similarity=-0.143 Sum_probs=28.3
Q ss_pred CCCCceeeeeech---hhccC-ChhHH---HHHHHHHhcCCCe-EEEEEeCC
Q 035840 46 ATQSSVDLVTIAA---ALHWF-DLPQF---YKQVKWVLKKPNG-VIAAWTYT 89 (213)
Q Consensus 46 ~~~~sfDlV~~~~---~~hw~-d~~~~---~~e~~rvLk~pgG-~l~~~~~~ 89 (213)
+++..+|+|+|=. +=++. |.... +.-+.++|+ ||| .|++=-+.
T Consensus 135 ~~~~~~DvVLSDMAPnSG~~~vD~~Rs~~aL~~A~~~Lk-~gG~~FvvKVFq 185 (269)
T 2px2_A 135 KPSEISDTLLCDIGESSPSAEIEEQRTLRILEMVSDWLS-RGPKEFCIKILC 185 (269)
T ss_dssp SCCCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHT-TCCSEEEEEESC
T ss_pred CCCCCCCEEEeCCCCCCCccHHHHHHHHHHHHHHHHHhh-cCCcEEEEEECC
Confidence 3456799999654 33444 66644 656678999 999 77743333
No 361
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=62.43 E-value=21 Score=28.60 Aligned_cols=80 Identities=14% Similarity=0.214 Sum_probs=50.1
Q ss_pred cCCeEEEEeCCHHHHHHhhcC----CCceEEecCCCCcchhhccCCCCCCceeeeeechhhccC-ChhHHHHHHHH--Hh
Q 035840 4 IYKNVIATDTSPKQLEFAIKL----PNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWF-DLPQFYKQVKW--VL 76 (213)
Q Consensus 4 ~~~~V~gvD~S~~ml~~Ar~~----~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~-d~~~~~~e~~r--vL 76 (213)
..++++.+|.++.-++.-++. .+++....|+. .-+..+.-+...||+|+.==.+.-- +..+++..+.+ .+
T Consensus 112 ~~d~~vfvE~~~~a~~~L~~Nl~~~~~~~V~~~D~~---~~L~~l~~~~~~fdLVfiDPPYe~k~~~~~vl~~L~~~~~r 188 (283)
T 2oo3_A 112 SQDRLYLCELHPTEYNFLLKLPHFNKKVYVNHTDGV---SKLNALLPPPEKRGLIFIDPSYERKEEYKEIPYAIKNAYSK 188 (283)
T ss_dssp TTSEEEEECCSHHHHHHHTTSCCTTSCEEEECSCHH---HHHHHHCSCTTSCEEEEECCCCCSTTHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEeCCHHHHHHHHHHhCcCCcEEEEeCcHH---HHHHHhcCCCCCccEEEECCCCCCCcHHHHHHHHHHHhCcc
Confidence 458999999999999998873 34666666641 0012111233469999964444322 44555555554 34
Q ss_pred cCCCeEEEEEe
Q 035840 77 KKPNGVIAAWT 87 (213)
Q Consensus 77 k~pgG~l~~~~ 87 (213)
. |+|.+++|-
T Consensus 189 ~-~~Gi~v~WY 198 (283)
T 2oo3_A 189 F-STGLYCVWY 198 (283)
T ss_dssp C-TTSEEEEEE
T ss_pred C-CCeEEEEEE
Confidence 5 899998884
No 362
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=61.08 E-value=4.5 Score=33.44 Aligned_cols=33 Identities=24% Similarity=0.459 Sum_probs=26.6
Q ss_pred echhhc-cC-----ChhHHHHHHHHHhcCCCeEEEEEeCC
Q 035840 56 IAAALH-WF-----DLPQFYKQVKWVLKKPNGVIAAWTYT 89 (213)
Q Consensus 56 ~~~~~h-w~-----d~~~~~~e~~rvLk~pgG~l~~~~~~ 89 (213)
..|++. .+ ....++..+.++|+ |||+|++.++.
T Consensus 238 tFQALRI~VN~EL~~L~~~L~~a~~~L~-~gGRl~VISFH 276 (347)
T 3tka_A 238 TFQAVRIWVNSELEEIEQALKSSLNVLA-PGGRLSIISFH 276 (347)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHEE-EEEEEEEEESS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCCEEEEEecC
Confidence 577775 44 34678899999999 99999998887
No 363
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=60.74 E-value=2.5 Score=34.72 Aligned_cols=74 Identities=18% Similarity=0.172 Sum_probs=45.8
Q ss_pred CCeEEEEeCCHHHHHHhhcCCCceEEecCCCCcchhh-ccCCCCCCceeeeeechhhccCChhHHHHHHHHHhcCCCeEE
Q 035840 5 YKNVIATDTSPKQLEFAIKLPNIRYQLTPPTMSITEL-EQNVATQSSVDLVTIAAALHWFDLPQFYKQVKWVLKKPNGVI 83 (213)
Q Consensus 5 ~~~V~gvD~S~~ml~~Ar~~~~v~~~~~~~~~~~~d~-~~~~~~~~sfDlV~~~~~~hw~d~~~~~~e~~rvLk~pgG~l 83 (213)
..+|+++|.|++-++.+++..-........+ .++ +... +.+|+|+-+...- ....+.++.++|+ |||++
T Consensus 203 Ga~Vi~~~~~~~~~~~~~~lGa~~v~~~~~~---~~~~~~~~---~~~D~vid~~g~~---~~~~~~~~~~~l~-~~G~i 272 (360)
T 1piw_A 203 GAETYVISRSSRKREDAMKMGADHYIATLEE---GDWGEKYF---DTFDLIVVCASSL---TDIDFNIMPKAMK-VGGRI 272 (360)
T ss_dssp TCEEEEEESSSTTHHHHHHHTCSEEEEGGGT---SCHHHHSC---SCEEEEEECCSCS---TTCCTTTGGGGEE-EEEEE
T ss_pred CCEEEEEcCCHHHHHHHHHcCCCEEEcCcCc---hHHHHHhh---cCCCEEEECCCCC---cHHHHHHHHHHhc-CCCEE
Confidence 4589999999999999987532222221110 011 2221 4699998654420 0244667788999 99999
Q ss_pred EEEeC
Q 035840 84 AAWTY 88 (213)
Q Consensus 84 ~~~~~ 88 (213)
.....
T Consensus 273 v~~g~ 277 (360)
T 1piw_A 273 VSISI 277 (360)
T ss_dssp EECCC
T ss_pred EEecC
Confidence 76654
No 364
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=60.35 E-value=3.5 Score=32.58 Aligned_cols=71 Identities=10% Similarity=0.042 Sum_probs=45.2
Q ss_pred CCceEEecCCCCcchhhccCC-----CCCCceeeeeechhhccCChhHHHHHHHHHhcCCCeEEEEEeCCCCCcChHHHH
Q 035840 25 PNIRYQLTPPTMSITELEQNV-----ATQSSVDLVTIAAALHWFDLPQFYKQVKWVLKKPNGVIAAWTYTMPEINESVGA 99 (213)
Q Consensus 25 ~~v~~~~~~~~~~~~d~~~~~-----~~~~sfDlV~~~~~~hw~d~~~~~~e~~rvLk~pgG~l~~~~~~~~~~~~~~~~ 99 (213)
.+++++.|++. +.+| .+..+||+|+.=.-. .-.....+..+...|+ |||.+++-+++.+.+. ...+
T Consensus 158 ~~i~li~G~~~------dTL~~~l~~~~~~~~dlv~ID~D~-Y~~t~~~le~~~p~l~-~GGvIv~DD~~~~~w~-G~~~ 228 (257)
T 3tos_A 158 QRSVLVEGDVR------ETVPRYLAENPQTVIALAYFDLDL-YEPTKAVLEAIRPYLT-KGSIVAFDELDNPKWP-GENI 228 (257)
T ss_dssp CSEEEEESCHH------HHHHHHHHHCTTCCEEEEEECCCC-HHHHHHHHHHHGGGEE-EEEEEEESSTTCTTCT-HHHH
T ss_pred CcEEEEEecHH------HHHHHHHHhCCCCceEEEEEcCcc-cchHHHHHHHHHHHhC-CCcEEEEcCCCCCCCh-HHHH
Confidence 56888888873 2222 345679999955421 2244567888999999 9999988777644432 3334
Q ss_pred hcccc
Q 035840 100 VFKPF 104 (213)
Q Consensus 100 ~~~~~ 104 (213)
.+..|
T Consensus 229 A~~ef 233 (257)
T 3tos_A 229 AMRKV 233 (257)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 44444
No 365
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=59.52 E-value=5.1 Score=32.58 Aligned_cols=41 Identities=15% Similarity=0.171 Sum_probs=28.6
Q ss_pred CCCCceeeeeechhhccC-Ch----hHHHHHHHHHhcCCCeEEEEEeC
Q 035840 46 ATQSSVDLVTIAAALHWF-DL----PQFYKQVKWVLKKPNGVIAAWTY 88 (213)
Q Consensus 46 ~~~~sfDlV~~~~~~hw~-d~----~~~~~e~~rvLk~pgG~l~~~~~ 88 (213)
+++..||+|+. .+|--- +| +..+++++|+++ |||+|+.++.
T Consensus 182 l~~~~~Da~fl-DgFsP~kNPeLWs~e~f~~l~~~~~-pgg~laTYta 227 (308)
T 3vyw_A 182 VENFKADAVFH-DAFSPYKNPELWTLDFLSLIKERID-EKGYWVSYSS 227 (308)
T ss_dssp CCSCCEEEEEE-CCSCTTTSGGGGSHHHHHHHHTTEE-EEEEEEESCC
T ss_pred hcccceeEEEe-CCCCcccCcccCCHHHHHHHHHHhC-CCcEEEEEeC
Confidence 34557999884 333211 33 589999999999 9999976543
No 366
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=58.66 E-value=23 Score=28.41 Aligned_cols=67 Identities=16% Similarity=0.301 Sum_probs=43.3
Q ss_pred eEEEEeCCHHHHHHhhcCCCceEEecCCCCcchhhccCCCCCCceeeeeechhhccCChhHHHHHHHHHhcCCCeEEEE
Q 035840 7 NVIATDTSPKQLEFAIKLPNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWFDLPQFYKQVKWVLKKPNGVIAA 85 (213)
Q Consensus 7 ~V~gvD~S~~ml~~Ar~~~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~d~~~~~~e~~rvLk~pgG~l~~ 85 (213)
+|++.|.+++-++.+++..-+.-...+. ++. .-...|+|+.+.-.. ....+++++...|+ ||..+.-
T Consensus 60 ~V~~~dr~~~~~~~a~~~G~~~~~~~~~-------~~~--~~~~aDvVilavp~~--~~~~vl~~l~~~l~-~~~iv~d 126 (314)
T 3ggo_A 60 KIYGYDINPESISKAVDLGIIDEGTTSI-------AKV--EDFSPDFVMLSSPVR--TFREIAKKLSYILS-EDATVTD 126 (314)
T ss_dssp EEEEECSCHHHHHHHHHTTSCSEEESCT-------TGG--GGGCCSEEEECSCGG--GHHHHHHHHHHHSC-TTCEEEE
T ss_pred EEEEEECCHHHHHHHHHCCCcchhcCCH-------HHH--hhccCCEEEEeCCHH--HHHHHHHHHhhccC-CCcEEEE
Confidence 8999999999999888653221122222 220 012379999765543 34677888999999 8876643
No 367
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=58.05 E-value=23 Score=29.78 Aligned_cols=77 Identities=10% Similarity=-0.061 Sum_probs=47.7
Q ss_pred cCCeEEEEeCCHHHHHHhhcCCCceEEec-CCCCc-----------------chhhccCCCCCCceeeeeechhhccCCh
Q 035840 4 IYKNVIATDTSPKQLEFAIKLPNIRYQLT-PPTMS-----------------ITELEQNVATQSSVDLVTIAAALHWFDL 65 (213)
Q Consensus 4 ~~~~V~gvD~S~~ml~~Ar~~~~v~~~~~-~~~~~-----------------~~d~~~~~~~~~sfDlV~~~~~~hw~d~ 65 (213)
..++|++++.|++-++.+++..-...... +.+.. ...+.+. . ...+|+|+-+.+-
T Consensus 244 ~Ga~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-~-g~g~Dvvid~~G~----- 316 (447)
T 4a0s_A 244 GGGIPVAVVSSAQKEAAVRALGCDLVINRAELGITDDIADDPRRVVETGRKLAKLVVEK-A-GREPDIVFEHTGR----- 316 (447)
T ss_dssp TTCEEEEEESSHHHHHHHHHTTCCCEEEHHHHTCCTTGGGCHHHHHHHHHHHHHHHHHH-H-SSCCSEEEECSCH-----
T ss_pred cCCEEEEEeCCHHHHHHHHhcCCCEEEecccccccccccccccccchhhhHHHHHHHHH-h-CCCceEEEECCCc-----
Confidence 35689999999999999987632112211 10000 0011111 1 3469999866553
Q ss_pred hHHHHHHHHHhcCCCeEEEEEeCC
Q 035840 66 PQFYKQVKWVLKKPNGVIAAWTYT 89 (213)
Q Consensus 66 ~~~~~e~~rvLk~pgG~l~~~~~~ 89 (213)
..+..+.++|+ +||++.+....
T Consensus 317 -~~~~~~~~~l~-~~G~iv~~G~~ 338 (447)
T 4a0s_A 317 -VTFGLSVIVAR-RGGTVVTCGSS 338 (447)
T ss_dssp -HHHHHHHHHSC-TTCEEEESCCT
T ss_pred -hHHHHHHHHHh-cCCEEEEEecC
Confidence 46788999999 99999876543
No 368
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=57.82 E-value=8.1 Score=31.63 Aligned_cols=73 Identities=14% Similarity=0.153 Sum_probs=46.6
Q ss_pred CCeEEEEeCCH---HHHHHhhcCCCceEEecCCCCcchhhccCCCCCCceeeeeechhhccCChhHHH-HHHHHHhcCCC
Q 035840 5 YKNVIATDTSP---KQLEFAIKLPNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWFDLPQFY-KQVKWVLKKPN 80 (213)
Q Consensus 5 ~~~V~gvD~S~---~ml~~Ar~~~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~d~~~~~-~e~~rvLk~pg 80 (213)
..+|+++|.++ +-++.+++. ++.....+ + ....+.+. . +.+|+|+-+.+. ...+ .++.++|+ ||
T Consensus 204 Ga~Vi~~~~~~~~~~~~~~~~~~-ga~~v~~~-~-~~~~~~~~--~-~~~d~vid~~g~-----~~~~~~~~~~~l~-~~ 271 (366)
T 2cdc_A 204 GLEVWMANRREPTEVEQTVIEET-KTNYYNSS-N-GYDKLKDS--V-GKFDVIIDATGA-----DVNILGNVIPLLG-RN 271 (366)
T ss_dssp TCEEEEEESSCCCHHHHHHHHHH-TCEEEECT-T-CSHHHHHH--H-CCEEEEEECCCC-----CTHHHHHHGGGEE-EE
T ss_pred CCEEEEEeCCccchHHHHHHHHh-CCceechH-H-HHHHHHHh--C-CCCCEEEECCCC-----hHHHHHHHHHHHh-cC
Confidence 45999999998 888888765 23322111 1 11112221 1 469999866553 2356 88999999 99
Q ss_pred eEEEEEeCC
Q 035840 81 GVIAAWTYT 89 (213)
Q Consensus 81 G~l~~~~~~ 89 (213)
|++.+....
T Consensus 272 G~iv~~g~~ 280 (366)
T 2cdc_A 272 GVLGLFGFS 280 (366)
T ss_dssp EEEEECSCC
T ss_pred CEEEEEecC
Confidence 999776543
No 369
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=56.89 E-value=20 Score=24.19 Aligned_cols=78 Identities=12% Similarity=-0.035 Sum_probs=45.1
Q ss_pred ccCCeEEEEeCCHHHHHHhhcCCCceEEecCCCCcchhhccCCCCCCceeeeeechhhccCChhHHHHHHHHHhcCCCeE
Q 035840 3 KIYKNVIATDTSPKQLEFAIKLPNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWFDLPQFYKQVKWVLKKPNGV 82 (213)
Q Consensus 3 ~~~~~V~gvD~S~~ml~~Ar~~~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~d~~~~~~e~~rvLk~pgG~ 82 (213)
....+|+++|.+++.++..++..++.+..++.... ..+.. ..-..+|+|+.+.... .....+.++.+.+. ++ .
T Consensus 25 ~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~d~~~~-~~l~~--~~~~~~d~vi~~~~~~--~~~~~~~~~~~~~~-~~-~ 97 (140)
T 1lss_A 25 EKGHDIVLIDIDKDICKKASAEIDALVINGDCTKI-KTLED--AGIEDADMYIAVTGKE--EVNLMSSLLAKSYG-IN-K 97 (140)
T ss_dssp HTTCEEEEEESCHHHHHHHHHHCSSEEEESCTTSH-HHHHH--TTTTTCSEEEECCSCH--HHHHHHHHHHHHTT-CC-C
T ss_pred hCCCeEEEEECCHHHHHHHHHhcCcEEEEcCCCCH-HHHHH--cCcccCCEEEEeeCCc--hHHHHHHHHHHHcC-CC-E
Confidence 44678999999999887766433566666655211 01111 1123589998775432 22234556677788 75 5
Q ss_pred EEEEe
Q 035840 83 IAAWT 87 (213)
Q Consensus 83 l~~~~ 87 (213)
+.+..
T Consensus 98 ii~~~ 102 (140)
T 1lss_A 98 TIARI 102 (140)
T ss_dssp EEEEC
T ss_pred EEEEe
Confidence 54433
No 370
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=55.59 E-value=34 Score=27.95 Aligned_cols=74 Identities=11% Similarity=-0.043 Sum_probs=46.1
Q ss_pred CCeEEEEeCCHHHHHHhhcCCCceEEecCCCCcchhhccCCCCCCceeeeeechhhccCChhHHHHHHHHHh-cCCCeEE
Q 035840 5 YKNVIATDTSPKQLEFAIKLPNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWFDLPQFYKQVKWVL-KKPNGVI 83 (213)
Q Consensus 5 ~~~V~gvD~S~~ml~~Ar~~~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~d~~~~~~e~~rvL-k~pgG~l 83 (213)
..+|+++. |++-++.++++.-........+.....+.++ .++.+|+|+-+.+ -..++..+.+.| + +||++
T Consensus 189 Ga~Vi~~~-~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~--t~g~~d~v~d~~g-----~~~~~~~~~~~l~~-~~G~i 259 (371)
T 3gqv_A 189 GYIPIATC-SPHNFDLAKSRGAEEVFDYRAPNLAQTIRTY--TKNNLRYALDCIT-----NVESTTFCFAAIGR-AGGHY 259 (371)
T ss_dssp TCEEEEEE-CGGGHHHHHHTTCSEEEETTSTTHHHHHHHH--TTTCCCEEEESSC-----SHHHHHHHHHHSCT-TCEEE
T ss_pred CCEEEEEe-CHHHHHHHHHcCCcEEEECCCchHHHHHHHH--ccCCccEEEECCC-----chHHHHHHHHHhhc-CCCEE
Confidence 55899985 8999999998743223332221111112221 2334999985444 246788889999 8 89999
Q ss_pred EEEe
Q 035840 84 AAWT 87 (213)
Q Consensus 84 ~~~~ 87 (213)
+...
T Consensus 260 v~~g 263 (371)
T 3gqv_A 260 VSLN 263 (371)
T ss_dssp EESS
T ss_pred EEEe
Confidence 7665
No 371
>4gua_A Non-structural polyprotein; viral precursor polyprotein, protease, zinc-binding, hydrola; HET: MES; 2.85A {Sindbis virus}
Probab=55.29 E-value=7.7 Score=34.30 Aligned_cols=42 Identities=29% Similarity=0.413 Sum_probs=29.7
Q ss_pred CCCceeeeeechhh----ccC----ChhHHH----HHHHHHhcCCCeEEEEEeCC
Q 035840 47 TQSSVDLVTIAAAL----HWF----DLPQFY----KQVKWVLKKPNGVIAAWTYT 89 (213)
Q Consensus 47 ~~~sfDlV~~~~~~----hw~----d~~~~~----~e~~rvLk~pgG~l~~~~~~ 89 (213)
+++.||+|+++..- |+. |+.--+ ..+.+.|| |||++.+..|+
T Consensus 218 ~~~ryDlvfvn~~t~yr~HHyqQCeDHa~~l~ml~~~al~~l~-pGGt~v~~~YG 271 (670)
T 4gua_A 218 PQARYDLVFINIGTKYRNHHFQQCEDHAATLKTLSRSALNCLN-PGGTLVVKSYG 271 (670)
T ss_dssp CCCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHTEE-EEEEEEEEESC
T ss_pred CCCcccEEEEecCCCcccchHHHHHHHHHHHHHHhHHHHhhcC-CCceEEEEEee
Confidence 35689999976544 332 544333 56678899 99999988887
No 372
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=54.25 E-value=17 Score=29.79 Aligned_cols=74 Identities=11% Similarity=-0.072 Sum_probs=43.9
Q ss_pred CCeEEEEeCCHHHHHHhhcCCCceEEecCCCCcchhhccCCCCCCceeeeeechhhccCChhHHHHHHHHHhcCCCeEEE
Q 035840 5 YKNVIATDTSPKQLEFAIKLPNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWFDLPQFYKQVKWVLKKPNGVIA 84 (213)
Q Consensus 5 ~~~V~gvD~S~~ml~~Ar~~~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~d~~~~~~e~~rvLk~pgG~l~ 84 (213)
..+|++++ |++-++.+++..-........+.....+.+ ...+|+|+-+.+-. ...+....++|+ +||+++
T Consensus 208 Ga~Vi~~~-~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~----~~g~D~vid~~g~~----~~~~~~~~~~l~-~~G~iv 277 (375)
T 2vn8_A 208 DAHVTAVC-SQDASELVRKLGADDVIDYKSGSVEEQLKS----LKPFDFILDNVGGS----TETWAPDFLKKW-SGATYV 277 (375)
T ss_dssp TCEEEEEE-CGGGHHHHHHTTCSEEEETTSSCHHHHHHT----SCCBSEEEESSCTT----HHHHGGGGBCSS-SCCEEE
T ss_pred CCEEEEEe-ChHHHHHHHHcCCCEEEECCchHHHHHHhh----cCCCCEEEECCCCh----hhhhHHHHHhhc-CCcEEE
Confidence 56899999 788888888763212222211111111111 14699998655421 135677788999 999997
Q ss_pred EEeC
Q 035840 85 AWTY 88 (213)
Q Consensus 85 ~~~~ 88 (213)
....
T Consensus 278 ~~g~ 281 (375)
T 2vn8_A 278 TLVT 281 (375)
T ss_dssp ESCC
T ss_pred EeCC
Confidence 6653
No 373
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=50.95 E-value=30 Score=26.85 Aligned_cols=70 Identities=16% Similarity=0.258 Sum_probs=42.6
Q ss_pred eEEEEeCCHHHHHHhhcCCCceEEecCCCCcchhhccCCCCCCceeeeeechhhccCChhHHHHHHHHHhcCCCeEEEEE
Q 035840 7 NVIATDTSPKQLEFAIKLPNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWFDLPQFYKQVKWVLKKPNGVIAAW 86 (213)
Q Consensus 7 ~V~gvD~S~~ml~~Ar~~~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~d~~~~~~e~~rvLk~pgG~l~~~ 86 (213)
+|+++|.+++.++.+++..-......+. ++. +.+ ..|+|+.+.--. ....++.++...++ ||..+...
T Consensus 28 ~V~~~d~~~~~~~~~~~~g~~~~~~~~~-------~~~-~~~-~aDvVilavp~~--~~~~v~~~l~~~l~-~~~iv~~~ 95 (281)
T 2g5c_A 28 KIYGYDINPESISKAVDLGIIDEGTTSI-------AKV-EDF-SPDFVMLSSPVR--TFREIAKKLSYILS-EDATVTDQ 95 (281)
T ss_dssp EEEEECSCHHHHHHHHHTTSCSEEESCG-------GGG-GGT-CCSEEEECSCHH--HHHHHHHHHHHHSC-TTCEEEEC
T ss_pred EEEEEeCCHHHHHHHHHCCCcccccCCH-------HHH-hcC-CCCEEEEcCCHH--HHHHHHHHHHhhCC-CCcEEEEC
Confidence 7999999999988887642111111111 221 111 479998765443 23467778888899 88766543
Q ss_pred eC
Q 035840 87 TY 88 (213)
Q Consensus 87 ~~ 88 (213)
..
T Consensus 96 ~~ 97 (281)
T 2g5c_A 96 GS 97 (281)
T ss_dssp CS
T ss_pred CC
Confidence 33
No 374
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=50.94 E-value=21 Score=28.45 Aligned_cols=68 Identities=22% Similarity=0.079 Sum_probs=41.9
Q ss_pred CCeEEEEeCCHHHHHHhhcCCCceEEecCCCCcchh-hccCCCCCCceeeeeechhhccCChhHHHHHHHHHhcCCCeEE
Q 035840 5 YKNVIATDTSPKQLEFAIKLPNIRYQLTPPTMSITE-LEQNVATQSSVDLVTIAAALHWFDLPQFYKQVKWVLKKPNGVI 83 (213)
Q Consensus 5 ~~~V~gvD~S~~ml~~Ar~~~~v~~~~~~~~~~~~d-~~~~~~~~~sfDlV~~~~~~hw~d~~~~~~e~~rvLk~pgG~l 83 (213)
..+|++++ ++.-++.+++..-........+ + +.+. . ..+|+|+-+.+- ..+.++.++|+ |||++
T Consensus 177 Ga~vi~~~-~~~~~~~~~~lGa~~~i~~~~~----~~~~~~-~--~g~D~v~d~~g~------~~~~~~~~~l~-~~G~i 241 (321)
T 3tqh_A 177 GTTVITTA-SKRNHAFLKALGAEQCINYHEE----DFLLAI-S--TPVDAVIDLVGG------DVGIQSIDCLK-ETGCI 241 (321)
T ss_dssp TCEEEEEE-CHHHHHHHHHHTCSEEEETTTS----CHHHHC-C--SCEEEEEESSCH------HHHHHHGGGEE-EEEEE
T ss_pred CCEEEEEe-ccchHHHHHHcCCCEEEeCCCc----chhhhh-c--cCCCEEEECCCc------HHHHHHHHhcc-CCCEE
Confidence 56899998 5555888887532222222211 1 1221 1 469999865542 33488899999 99999
Q ss_pred EEEe
Q 035840 84 AAWT 87 (213)
Q Consensus 84 ~~~~ 87 (213)
....
T Consensus 242 v~~g 245 (321)
T 3tqh_A 242 VSVP 245 (321)
T ss_dssp EECC
T ss_pred EEeC
Confidence 7653
No 375
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=49.54 E-value=12 Score=30.72 Aligned_cols=73 Identities=14% Similarity=0.111 Sum_probs=45.6
Q ss_pred CCeEEEEeCCHHHHHHhh-cCCCceEEecCCCCcchhhccCCCCCCceeeeeechhhccCChhHHHHHHHHHhcCCCeEE
Q 035840 5 YKNVIATDTSPKQLEFAI-KLPNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWFDLPQFYKQVKWVLKKPNGVI 83 (213)
Q Consensus 5 ~~~V~gvD~S~~ml~~Ar-~~~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~d~~~~~~e~~rvLk~pgG~l 83 (213)
..+|+++|.|++-++.++ +..........- ...+.+.. +.+|+|+-+... ...+.++.+.|+ +||++
T Consensus 211 Ga~Vi~~~~~~~~~~~~~~~lGa~~v~~~~~---~~~~~~~~---~~~D~vid~~g~-----~~~~~~~~~~l~-~~G~i 278 (366)
T 1yqd_A 211 GSKVTVISTSPSKKEEALKNFGADSFLVSRD---QEQMQAAA---GTLDGIIDTVSA-----VHPLLPLFGLLK-SHGKL 278 (366)
T ss_dssp TCEEEEEESCGGGHHHHHHTSCCSEEEETTC---HHHHHHTT---TCEEEEEECCSS-----CCCSHHHHHHEE-EEEEE
T ss_pred CCEEEEEeCCHHHHHHHHHhcCCceEEeccC---HHHHHHhh---CCCCEEEECCCc-----HHHHHHHHHHHh-cCCEE
Confidence 468999999999998887 442212222111 01223321 369999865543 124567889999 99998
Q ss_pred EEEeCC
Q 035840 84 AAWTYT 89 (213)
Q Consensus 84 ~~~~~~ 89 (213)
......
T Consensus 279 v~~g~~ 284 (366)
T 1yqd_A 279 ILVGAP 284 (366)
T ss_dssp EECCCC
T ss_pred EEEccC
Confidence 876543
No 376
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=48.79 E-value=6.4 Score=31.74 Aligned_cols=23 Identities=26% Similarity=0.534 Sum_probs=20.3
Q ss_pred hHHHHHHHHHhcCCCeEEEEEeCC
Q 035840 66 PQFYKQVKWVLKKPNGVIAAWTYT 89 (213)
Q Consensus 66 ~~~~~e~~rvLk~pgG~l~~~~~~ 89 (213)
..++..+.++|+ |||++++.++.
T Consensus 225 ~~~l~~~~~~l~-~ggr~~visfh 247 (301)
T 1m6y_A 225 KEFLKKAEDLLN-PGGRIVVISFH 247 (301)
T ss_dssp HHHHHHGGGGEE-EEEEEEEEESS
T ss_pred HHHHHHHHHhhC-CCCEEEEEecC
Confidence 678888889999 99999988876
No 377
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=48.60 E-value=7.3 Score=31.83 Aligned_cols=73 Identities=18% Similarity=0.152 Sum_probs=45.5
Q ss_pred CCeEEEEeCCHHHHHHhh-cCCCceEEecCCCCcchhhccCCCCCCceeeeeechhhccCChhHHHHHHHHHhcCCCeEE
Q 035840 5 YKNVIATDTSPKQLEFAI-KLPNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWFDLPQFYKQVKWVLKKPNGVI 83 (213)
Q Consensus 5 ~~~V~gvD~S~~ml~~Ar-~~~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~d~~~~~~e~~rvLk~pgG~l 83 (213)
.++|+++|.|++-++.++ +..-.......- ...+.+.. +.+|+|+-+..- ...+..+.++|+ |||++
T Consensus 204 Ga~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~---~~~~~~~~---~g~D~vid~~g~-----~~~~~~~~~~l~-~~G~i 271 (357)
T 2cf5_A 204 GHHVTVISSSNKKREEALQDLGADDYVIGSD---QAKMSELA---DSLDYVIDTVPV-----HHALEPYLSLLK-LDGKL 271 (357)
T ss_dssp TCEEEEEESSTTHHHHHHTTSCCSCEEETTC---HHHHHHST---TTEEEEEECCCS-----CCCSHHHHTTEE-EEEEE
T ss_pred CCeEEEEeCChHHHHHHHHHcCCceeecccc---HHHHHHhc---CCCCEEEECCCC-----hHHHHHHHHHhc-cCCEE
Confidence 468999999999999888 442111222111 01122221 359999855442 234677889999 99999
Q ss_pred EEEeCC
Q 035840 84 AAWTYT 89 (213)
Q Consensus 84 ~~~~~~ 89 (213)
.+....
T Consensus 272 v~~G~~ 277 (357)
T 2cf5_A 272 ILMGVI 277 (357)
T ss_dssp EECSCC
T ss_pred EEeCCC
Confidence 876543
No 378
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=46.66 E-value=18 Score=24.81 Aligned_cols=54 Identities=20% Similarity=0.199 Sum_probs=35.8
Q ss_pred cccCCeEEEEeCCHHHHHHhhcCCCceEEecCCCCcchhhccCCCCCCceeeeeechh
Q 035840 2 AKIYKNVIATDTSPKQLEFAIKLPNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAA 59 (213)
Q Consensus 2 a~~~~~V~gvD~S~~ml~~Ar~~~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~ 59 (213)
+....+|+++|.+++.++.++.. ++.+..+++... ..++.. .-..+|+|+.+..
T Consensus 26 ~~~g~~V~~id~~~~~~~~~~~~-~~~~~~gd~~~~-~~l~~~--~~~~~d~vi~~~~ 79 (141)
T 3llv_A 26 TAAGKKVLAVDKSKEKIELLEDE-GFDAVIADPTDE-SFYRSL--DLEGVSAVLITGS 79 (141)
T ss_dssp HHTTCCEEEEESCHHHHHHHHHT-TCEEEECCTTCH-HHHHHS--CCTTCSEEEECCS
T ss_pred HHCCCeEEEEECCHHHHHHHHHC-CCcEEECCCCCH-HHHHhC--CcccCCEEEEecC
Confidence 34567999999999999888764 567777776321 112332 2345898887665
No 379
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=46.62 E-value=35 Score=24.44 Aligned_cols=78 Identities=17% Similarity=-0.035 Sum_probs=44.8
Q ss_pred CCeEEEEeCCHHHHHHhhcCCCceEEecCCCCcchhhccCCCCCCceeeeeechhhccCChhHHHHHHHHHhcCCCeEEE
Q 035840 5 YKNVIATDTSPKQLEFAIKLPNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWFDLPQFYKQVKWVLKKPNGVIA 84 (213)
Q Consensus 5 ~~~V~gvD~S~~ml~~Ar~~~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~d~~~~~~e~~rvLk~pgG~l~ 84 (213)
..+|+++|.+++-++.++.. ++....+++... ..+.+. ..-..+|+|+.+..-. ..........+-+. |++.+.
T Consensus 63 g~~V~vid~~~~~~~~~~~~-g~~~~~gd~~~~-~~l~~~-~~~~~ad~vi~~~~~~--~~~~~~~~~~~~~~-~~~~ii 136 (183)
T 3c85_A 63 GKISLGIEIREEAAQQHRSE-GRNVISGDATDP-DFWERI-LDTGHVKLVLLAMPHH--QGNQTALEQLQRRN-YKGQIA 136 (183)
T ss_dssp CSCEEEEESCHHHHHHHHHT-TCCEEECCTTCH-HHHHTB-CSCCCCCEEEECCSSH--HHHHHHHHHHHHTT-CCSEEE
T ss_pred CCeEEEEECCHHHHHHHHHC-CCCEEEcCCCCH-HHHHhc-cCCCCCCEEEEeCCCh--HHHHHHHHHHHHHC-CCCEEE
Confidence 56899999999999888765 566666665211 112222 0223589888754321 11122334556666 676766
Q ss_pred EEeC
Q 035840 85 AWTY 88 (213)
Q Consensus 85 ~~~~ 88 (213)
....
T Consensus 137 ~~~~ 140 (183)
T 3c85_A 137 AIAE 140 (183)
T ss_dssp EEES
T ss_pred EEEC
Confidence 5443
No 380
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=45.55 E-value=19 Score=30.69 Aligned_cols=23 Identities=26% Similarity=0.258 Sum_probs=18.5
Q ss_pred CcccCCeEEEEeCCHHHHHHhhc
Q 035840 1 LAKIYKNVIATDTSPKQLEFAIK 23 (213)
Q Consensus 1 la~~~~~V~gvD~S~~ml~~Ar~ 23 (213)
|+....+|+++|.+++-++..++
T Consensus 21 La~~G~~V~~~D~~~~~v~~l~~ 43 (450)
T 3gg2_A 21 FAELGANVRCIDTDRNKIEQLNS 43 (450)
T ss_dssp HHHTTCEEEEECSCHHHHHHHHH
T ss_pred HHhcCCEEEEEECCHHHHHHHHc
Confidence 35567799999999998887665
No 381
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=44.67 E-value=4.3 Score=29.42 Aligned_cols=64 Identities=9% Similarity=-0.010 Sum_probs=35.7
Q ss_pred cCCeEEEEeCCHHHHHHhhcCCCceEEecCCCCcchhhccCCCCC--CceeeeeechhhccCChhHHHHHHHHHhcCCCe
Q 035840 4 IYKNVIATDTSPKQLEFAIKLPNIRYQLTPPTMSITELEQNVATQ--SSVDLVTIAAALHWFDLPQFYKQVKWVLKKPNG 81 (213)
Q Consensus 4 ~~~~V~gvD~S~~ml~~Ar~~~~v~~~~~~~~~~~~d~~~~~~~~--~sfDlV~~~~~~hw~d~~~~~~e~~rvLk~pgG 81 (213)
..-.|+|+|+||.-++ +++.|. -+ |..+ ..||+|.+.-- --+....+-++++-. |.
T Consensus 58 ~g~~V~atDInp~Av~---------~v~dDi-------F~-P~~~~Y~~~DLIYsirP--P~El~~~i~~lA~~v---~a 115 (153)
T 2k4m_A 58 SKVDLVLTDIKPSHGG---------IVRDDI-------TS-PRMEIYRGAALIYSIRP--PAEIHSSLMRVADAV---GA 115 (153)
T ss_dssp SCCEEEEECSSCSSTT---------EECCCS-------SS-CCHHHHTTEEEEEEESC--CTTTHHHHHHHHHHH---TC
T ss_pred CCCeEEEEECCccccc---------eEEccC-------CC-CcccccCCcCEEEEcCC--CHHHHHHHHHHHHHc---CC
Confidence 3447999999987766 566555 22 2222 36999964321 114444444444433 45
Q ss_pred EEEEEeCC
Q 035840 82 VIAAWTYT 89 (213)
Q Consensus 82 ~l~~~~~~ 89 (213)
-|+|...+
T Consensus 116 dliI~pL~ 123 (153)
T 2k4m_A 116 RLIIKPLT 123 (153)
T ss_dssp EEEEECBT
T ss_pred CEEEEcCC
Confidence 56666544
No 382
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=44.28 E-value=37 Score=28.51 Aligned_cols=80 Identities=14% Similarity=0.052 Sum_probs=52.5
Q ss_pred ccCCeEEEEeCCHHHHHHhhcCCCceEEecCCCCcchhhccCCCCCCceeeeeechhhccCChhHHHHHHHHHhcCCCeE
Q 035840 3 KIYKNVIATDTSPKQLEFAIKLPNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWFDLPQFYKQVKWVLKKPNGV 82 (213)
Q Consensus 3 ~~~~~V~gvD~S~~ml~~Ar~~~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~d~~~~~~e~~rvLk~pgG~ 82 (213)
.....|+++|.+++.++.+++. ++..+.||+... ..++.. .-...|+|+++..-. ..........|-+. |+..
T Consensus 25 ~~g~~vvvId~d~~~v~~~~~~-g~~vi~GDat~~-~~L~~a--gi~~A~~viv~~~~~--~~n~~i~~~ar~~~-p~~~ 97 (413)
T 3l9w_A 25 SSGVKMVVLDHDPDHIETLRKF-GMKVFYGDATRM-DLLESA--GAAKAEVLINAIDDP--QTNLQLTEMVKEHF-PHLQ 97 (413)
T ss_dssp HTTCCEEEEECCHHHHHHHHHT-TCCCEESCTTCH-HHHHHT--TTTTCSEEEECCSSH--HHHHHHHHHHHHHC-TTCE
T ss_pred HCCCCEEEEECCHHHHHHHHhC-CCeEEEcCCCCH-HHHHhc--CCCccCEEEECCCCh--HHHHHHHHHHHHhC-CCCe
Confidence 4567899999999999999875 566788887321 112333 334588888766421 22344567778888 8877
Q ss_pred EEEEeCC
Q 035840 83 IAAWTYT 89 (213)
Q Consensus 83 l~~~~~~ 89 (213)
++....+
T Consensus 98 Iiara~~ 104 (413)
T 3l9w_A 98 IIARARD 104 (413)
T ss_dssp EEEEESS
T ss_pred EEEEECC
Confidence 7665443
No 383
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=44.12 E-value=17 Score=31.01 Aligned_cols=23 Identities=13% Similarity=0.369 Sum_probs=19.1
Q ss_pred CcccCCeEEEEeCCHHHHHHhhc
Q 035840 1 LAKIYKNVIATDTSPKQLEFAIK 23 (213)
Q Consensus 1 la~~~~~V~gvD~S~~ml~~Ar~ 23 (213)
||+.+.+|++.|.+++-++..++
T Consensus 27 La~~G~~V~~~D~~~~kv~~l~~ 49 (446)
T 4a7p_A 27 FSDFGHEVVCVDKDARKIELLHQ 49 (446)
T ss_dssp HHHTTCEEEEECSCSTTHHHHTT
T ss_pred HHHCCCEEEEEeCCHHHHHHHhc
Confidence 45667899999999998888765
No 384
>3ijw_A Aminoglycoside N3-acetyltransferase; anthrax, COA, acyltransferase, structural genom center for structural genomics of infectious diseases; HET: MSE ACO; 1.90A {Bacillus anthracis} SCOP: c.140.1.0 PDB: 3slf_A* 3n0s_A* 3slb_A* 3n0m_A* 3kzl_A* 3e4f_A*
Probab=43.49 E-value=24 Score=27.95 Aligned_cols=51 Identities=14% Similarity=0.154 Sum_probs=38.4
Q ss_pred cchhhccCCCCCCceeeeee-chhhccC--ChhHHHHHHHHHhcCCCeEEEEEeC
Q 035840 37 SITELEQNVATQSSVDLVTI-AAALHWF--DLPQFYKQVKWVLKKPNGVIAAWTY 88 (213)
Q Consensus 37 ~~~d~~~~~~~~~sfDlV~~-~~~~hw~--d~~~~~~e~~rvLk~pgG~l~~~~~ 88 (213)
+..+|.++.+..+..=+|++ ..++.|+ .+..++..+..++. |+|+|++-++
T Consensus 20 l~~~L~~LGi~~Gd~llVHsSl~~lG~v~gg~~~vi~AL~~~vg-~~GTLvmPt~ 73 (268)
T 3ijw_A 20 ITNDLRKLGLKKGMTVIVHSSLSSIGWISGGAVAVVEALMEVIT-EEGTIIMPTQ 73 (268)
T ss_dssp HHHHHHHHTCCTTCEEEEEECTGGGCCBTTHHHHHHHHHHHHHC-TTSEEEEECC
T ss_pred HHHHHHHcCCCCCCEEEEEechHHhCCCCCCHHHHHHHHHHHhC-CCCeEEEecc
Confidence 34567788888876666764 4455788 77788899999999 9999986553
No 385
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=42.85 E-value=62 Score=27.39 Aligned_cols=89 Identities=17% Similarity=0.105 Sum_probs=46.5
Q ss_pred CcccCCeEEEEeCCHHHHHHhhcC-CCceEEecCCC-Cc-----chhhccCCCCCCceeeeeechhhccC-------C--
Q 035840 1 LAKIYKNVIATDTSPKQLEFAIKL-PNIRYQLTPPT-MS-----ITELEQNVATQSSVDLVTIAAALHWF-------D-- 64 (213)
Q Consensus 1 la~~~~~V~gvD~S~~ml~~Ar~~-~~v~~~~~~~~-~~-----~~d~~~~~~~~~sfDlV~~~~~~hw~-------d-- 64 (213)
||+.+.+|+|+|.+++-++..++- ..+ +.. ..+ .+ .+.+.... .....|+|+.+-.-.-- |
T Consensus 30 La~~G~~V~~~D~~~~kv~~L~~g~~pi-~ep-gl~~ll~~~~~~g~l~~tt-d~~~aDvvii~VpTp~~~~~~~~~Dl~ 106 (431)
T 3ojo_A 30 FAKHGVDVLGVDINQQTIDKLQNGQISI-EEP-GLQEVYEEVLSSGKLKVST-TPEASDVFIIAVPTPNNDDQYRSCDIS 106 (431)
T ss_dssp HHHTTCEEEEECSCHHHHHHHHTTCCSS-CCT-THHHHHHHHHHTTCEEEES-SCCCCSEEEECCCCCBCSSSSCBBCCH
T ss_pred HHHCCCEEEEEECCHHHHHHHHCCCCCc-CCC-CHHHHHHhhcccCceEEeC-chhhCCEEEEEeCCCccccccCCccHH
Confidence 466778999999999999887752 111 000 000 00 00000000 01236777765444321 2
Q ss_pred -hhHHHHHHHHHhcCCCeEEEEEeCCCCCc
Q 035840 65 -LPQFYKQVKWVLKKPNGVIAAWTYTMPEI 93 (213)
Q Consensus 65 -~~~~~~e~~rvLk~pgG~l~~~~~~~~~~ 93 (213)
...+...+.+.|+ ||..+...+...|..
T Consensus 107 ~V~~~~~~i~~~l~-~g~iVV~~STV~pgt 135 (431)
T 3ojo_A 107 LVMRALDSILPFLK-KGNTIIVESTIAPKT 135 (431)
T ss_dssp HHHHHHHHHGGGCC-TTEEEEECSCCCTTH
T ss_pred HHHHHHHHHHHhCC-CCCEEEEecCCChhH
Confidence 3556678888899 776554444344443
No 386
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=42.21 E-value=40 Score=26.04 Aligned_cols=66 Identities=8% Similarity=0.067 Sum_probs=41.8
Q ss_pred cCCeEEEEeCCHHHHHHhhcCCCce-EEecCCCCcchhhccCCCCCCceeeeeechhhccCChhHHHHHHHHHhcCCCeE
Q 035840 4 IYKNVIATDTSPKQLEFAIKLPNIR-YQLTPPTMSITELEQNVATQSSVDLVTIAAALHWFDLPQFYKQVKWVLKKPNGV 82 (213)
Q Consensus 4 ~~~~V~gvD~S~~ml~~Ar~~~~v~-~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~d~~~~~~e~~rvLk~pgG~ 82 (213)
...+|+++|.+++.++.+++. ++. ....+. ++. ...|+|+.+.--+ ....++.++...++ ||..
T Consensus 22 ~g~~V~~~~~~~~~~~~~~~~-g~~~~~~~~~-------~~~----~~~D~vi~av~~~--~~~~~~~~l~~~~~-~~~~ 86 (279)
T 2f1k_A 22 RGHYLIGVSRQQSTCEKAVER-QLVDEAGQDL-------SLL----QTAKIIFLCTPIQ--LILPTLEKLIPHLS-PTAI 86 (279)
T ss_dssp TTCEEEEECSCHHHHHHHHHT-TSCSEEESCG-------GGG----TTCSEEEECSCHH--HHHHHHHHHGGGSC-TTCE
T ss_pred CCCEEEEEECCHHHHHHHHhC-CCCccccCCH-------HHh----CCCCEEEEECCHH--HHHHHHHHHHhhCC-CCCE
Confidence 345899999999988887654 221 112122 332 3489999776543 34566777777788 7765
Q ss_pred EE
Q 035840 83 IA 84 (213)
Q Consensus 83 l~ 84 (213)
+.
T Consensus 87 vv 88 (279)
T 2f1k_A 87 VT 88 (279)
T ss_dssp EE
T ss_pred EE
Confidence 53
No 387
>2nyg_A YOKD protein; PFAM02522, NYSGXRC, aminoglycoside 3-N- acetyltransferase, PSI-2, structural genomics, protein structure initiative; HET: COA; 2.60A {Bacillus subtilis} SCOP: c.140.1.2
Probab=40.68 E-value=23 Score=28.13 Aligned_cols=49 Identities=14% Similarity=0.140 Sum_probs=37.1
Q ss_pred cchhhccCCCCCCceeeee-echhhccC--ChhHHHHHHHHHhcCCCeEEEEE
Q 035840 37 SITELEQNVATQSSVDLVT-IAAALHWF--DLPQFYKQVKWVLKKPNGVIAAW 86 (213)
Q Consensus 37 ~~~d~~~~~~~~~sfDlV~-~~~~~hw~--d~~~~~~e~~rvLk~pgG~l~~~ 86 (213)
+..+|.++.+..+..=+|+ +..++.|+ .+..++..+..++. |+|+|++=
T Consensus 18 L~~~L~~LGI~~Gd~llVHsSl~~lG~v~gg~~~vi~AL~~~vg-~~GTLvmP 69 (273)
T 2nyg_A 18 ITEDLKALGLKKGMTVLVHSSLSSIGWVNGGAVAVIQALIDVVT-EEGTIVMP 69 (273)
T ss_dssp HHHHHHHHTCCTTCEEEEEECSGGGCCBTTHHHHHHHHHHHHHT-TTSEEEEE
T ss_pred HHHHHHHcCCCCCCEEEEEechHHhCCCCCCHHHHHHHHHHHhC-CCCeEEEe
Confidence 3456788888887666777 44556788 77778888888999 99999873
No 388
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=40.60 E-value=14 Score=29.90 Aligned_cols=90 Identities=9% Similarity=-0.007 Sum_probs=50.1
Q ss_pred CeEEEEeCCHHHHHH---hhcC--CCceEEec-CCCCcchhhccCCCCCCceeeeeechh--h--ccCChhH---HHHHH
Q 035840 6 KNVIATDTSPKQLEF---AIKL--PNIRYQLT-PPTMSITELEQNVATQSSVDLVTIAAA--L--HWFDLPQ---FYKQV 72 (213)
Q Consensus 6 ~~V~gvD~S~~ml~~---Ar~~--~~v~~~~~-~~~~~~~d~~~~~~~~~sfDlV~~~~~--~--hw~d~~~---~~~e~ 72 (213)
.+|+|+|+...-.+. .+++ ..|.+..+ ++ ..++. ..+|+|+|-.+ - .++|... ++.-+
T Consensus 119 ~~V~avdvG~~~he~P~~~~ql~w~lV~~~~~~Dv-------~~l~~--~~~D~ivcDigeSs~~~~ve~~Rtl~vLel~ 189 (321)
T 3lkz_A 119 QEVRGYTKGGPGHEEPQLVQSYGWNIVTMKSGVDV-------FYRPS--ECCDTLLCDIGESSSSAEVEEHRTIRVLEMV 189 (321)
T ss_dssp EEEEEECCCSTTSCCCCCCCBTTGGGEEEECSCCT-------TSSCC--CCCSEEEECCCCCCSCHHHHHHHHHHHHHHH
T ss_pred CEEEEEEcCCCCccCcchhhhcCCcceEEEeccCH-------hhCCC--CCCCEEEEECccCCCChhhhhhHHHHHHHHH
Confidence 479999998772210 0111 33666665 44 44433 55999995433 2 2445544 55666
Q ss_pred HHHhcCCC-eEEEEEeC--CCCCcChHHHHhccccc
Q 035840 73 KWVLKKPN-GVIAAWTY--TMPEINESVGAVFKPFD 105 (213)
Q Consensus 73 ~rvLk~pg-G~l~~~~~--~~~~~~~~~~~~~~~~~ 105 (213)
-+.|+ +| |.|++=-. ..|.+...+..+-..|.
T Consensus 190 ~~wL~-~~~~~f~~KVl~pY~~~v~e~l~~lq~~fg 224 (321)
T 3lkz_A 190 EDWLH-RGPREFCVKVLCPYMPKVIEKMELLQRRYG 224 (321)
T ss_dssp HHHHT-TCCCEEEEEESCTTSHHHHHHHHHHHHHHC
T ss_pred HHHhc-cCCCcEEEEEcCCCChHHHHHHHHHHHHhC
Confidence 78898 88 88875333 33544444454444443
No 389
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=39.90 E-value=28 Score=29.26 Aligned_cols=22 Identities=18% Similarity=0.274 Sum_probs=18.2
Q ss_pred cccCCeEEEEeCCHHHHHHhhc
Q 035840 2 AKIYKNVIATDTSPKQLEFAIK 23 (213)
Q Consensus 2 a~~~~~V~gvD~S~~ml~~Ar~ 23 (213)
+....+|+++|.+++-++..++
T Consensus 20 a~~G~~V~~~d~~~~~~~~l~~ 41 (436)
T 1mv8_A 20 SARGHEVIGVDVSSTKIDLINQ 41 (436)
T ss_dssp HHTTCEEEEECSCHHHHHHHHT
T ss_pred HHCCCEEEEEECCHHHHHHHhC
Confidence 4556789999999999888765
No 390
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=38.16 E-value=28 Score=28.09 Aligned_cols=72 Identities=17% Similarity=0.069 Sum_probs=39.1
Q ss_pred CCeEEEEeCCHHHHHHhhcCCCceEEecCCCCcchhhccCCCCCCceeeeeechhhccCChhHHHHHHHHHhcCCCeEEE
Q 035840 5 YKNVIATDTSPKQLEFAIKLPNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWFDLPQFYKQVKWVLKKPNGVIA 84 (213)
Q Consensus 5 ~~~V~gvD~S~~ml~~Ar~~~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~d~~~~~~e~~rvLk~pgG~l~ 84 (213)
..+|++++ |+.-.+.++ . +........+.....+.+. .++.+|+|+-+.+- ..+.++.++|+ |||+++
T Consensus 168 ~~~V~~~~-~~~~~~~~~-~-ga~~~~~~~~~~~~~~~~~--~~~g~Dvv~d~~g~------~~~~~~~~~l~-~~G~~v 235 (349)
T 4a27_A 168 NVTVFGTA-STFKHEAIK-D-SVTHLFDRNADYVQEVKRI--SAEGVDIVLDCLCG------DNTGKGLSLLK-PLGTYI 235 (349)
T ss_dssp TCEEEEEE-CGGGHHHHG-G-GSSEEEETTSCHHHHHHHH--CTTCEEEEEEECC-------------CTTEE-EEEEEE
T ss_pred CcEEEEeC-CHHHHHHHH-c-CCcEEEcCCccHHHHHHHh--cCCCceEEEECCCc------hhHHHHHHHhh-cCCEEE
Confidence 35899998 667777776 3 2222211222222222332 24579999965442 22467889999 999998
Q ss_pred EEeC
Q 035840 85 AWTY 88 (213)
Q Consensus 85 ~~~~ 88 (213)
+...
T Consensus 236 ~~G~ 239 (349)
T 4a27_A 236 LYGS 239 (349)
T ss_dssp EEC-
T ss_pred EECC
Confidence 7754
No 391
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=37.84 E-value=14 Score=29.08 Aligned_cols=71 Identities=25% Similarity=0.162 Sum_probs=43.6
Q ss_pred cccCCeEEEEeCCHHHHHHhhcC------------------------CCceEEecCCCCcchhhccCCCCCCceeeeeec
Q 035840 2 AKIYKNVIATDTSPKQLEFAIKL------------------------PNIRYQLTPPTMSITELEQNVATQSSVDLVTIA 57 (213)
Q Consensus 2 a~~~~~V~gvD~S~~ml~~Ar~~------------------------~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~ 57 (213)
+....+|+..|.+++.++.+++. .++.. ..+ +++. + ...|+|+.+
T Consensus 24 a~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~-~~~-------~~~~-~--~~aDlVi~a 92 (283)
T 4e12_A 24 AFHGFAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRY-SDD-------LAQA-V--KDADLVIEA 92 (283)
T ss_dssp HHTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEE-ESC-------HHHH-T--TTCSEEEEC
T ss_pred HhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEE-eCC-------HHHH-h--ccCCEEEEe
Confidence 44567999999999998887642 01111 111 1221 1 237999876
Q ss_pred hhhccCChhHHHHHHHHHhcCCCeEEE
Q 035840 58 AALHWFDLPQFYKQVKWVLKKPNGVIA 84 (213)
Q Consensus 58 ~~~hw~d~~~~~~e~~rvLk~pgG~l~ 84 (213)
-.-..--...+++++...++ |+..++
T Consensus 93 v~~~~~~~~~v~~~l~~~~~-~~~il~ 118 (283)
T 4e12_A 93 VPESLDLKRDIYTKLGELAP-AKTIFA 118 (283)
T ss_dssp CCSCHHHHHHHHHHHHHHSC-TTCEEE
T ss_pred ccCcHHHHHHHHHHHHhhCC-CCcEEE
Confidence 54332234567888999999 876654
No 392
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=37.18 E-value=76 Score=23.68 Aligned_cols=76 Identities=9% Similarity=-0.022 Sum_probs=47.6
Q ss_pred ccCCeEEEEeCCHHHHHHhhcCCCceEEecCCCCcchhhccCCCCCCceeeeeechhhccCChhHHHHHHHHHhcCCCeE
Q 035840 3 KIYKNVIATDTSPKQLEFAIKLPNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWFDLPQFYKQVKWVLKKPNGV 82 (213)
Q Consensus 3 ~~~~~V~gvD~S~~ml~~Ar~~~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~d~~~~~~e~~rvLk~pgG~ 82 (213)
.... |+++|.+++.++.++ .++.+..+++... ..++... -...|+|+++..-. .........+|-+. |+..
T Consensus 30 ~~g~-v~vid~~~~~~~~~~--~~~~~i~gd~~~~-~~l~~a~--i~~ad~vi~~~~~d--~~n~~~~~~a~~~~-~~~~ 100 (234)
T 2aef_A 30 GSEV-FVLAEDENVRKKVLR--SGANFVHGDPTRV-SDLEKAN--VRGARAVIVDLESD--SETIHCILGIRKID-ESVR 100 (234)
T ss_dssp TSEE-EEEESCGGGHHHHHH--TTCEEEESCTTCH-HHHHHTT--CTTCSEEEECCSCH--HHHHHHHHHHHHHC-SSSE
T ss_pred hCCe-EEEEECCHHHHHHHh--cCCeEEEcCCCCH-HHHHhcC--cchhcEEEEcCCCc--HHHHHHHHHHHHHC-CCCe
Confidence 3344 999999999998887 5788888887311 1122222 33588888765421 12234456677788 7766
Q ss_pred EEEEe
Q 035840 83 IAAWT 87 (213)
Q Consensus 83 l~~~~ 87 (213)
+....
T Consensus 101 iia~~ 105 (234)
T 2aef_A 101 IIAEA 105 (234)
T ss_dssp EEEEC
T ss_pred EEEEE
Confidence 65443
No 393
>3sma_A FRBF; N-acetyl transferase, acetyl COA binding, transferase; HET: ACO; 2.00A {Streptomyces rubellomurinus}
Probab=35.28 E-value=31 Score=27.62 Aligned_cols=51 Identities=18% Similarity=0.192 Sum_probs=38.5
Q ss_pred cchhhccCCCCCCceeeee-echhhccC--ChhHHHHHHHHHhcCCCeEEEEEeC
Q 035840 37 SITELEQNVATQSSVDLVT-IAAALHWF--DLPQFYKQVKWVLKKPNGVIAAWTY 88 (213)
Q Consensus 37 ~~~d~~~~~~~~~sfDlV~-~~~~~hw~--d~~~~~~e~~rvLk~pgG~l~~~~~ 88 (213)
+..+|.++.+..+..=+|+ +..++.|+ .++.++..+..++. |+|+|++-++
T Consensus 27 L~~~L~~LGI~~Gd~llVHsSL~~lG~v~Gga~~vi~AL~~~vg-~~GTLvmPt~ 80 (286)
T 3sma_A 27 LASDLAALGVRPGGVLLVHASLSALGWVCGGAQAVVLALQDAVG-KEGTLVMPTF 80 (286)
T ss_dssp HHHHHHHHTCCTTCEEEEEECSTTSCEETTHHHHHHHHHHHHHC-TTCEEEEECC
T ss_pred HHHHHHHcCCCCCCEEEEEechHHhCCCCCCHHHHHHHHHHHhc-CCCEEEEecc
Confidence 4456788888887666666 44455788 77788888999999 9999987653
No 394
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=34.77 E-value=48 Score=23.03 Aligned_cols=78 Identities=9% Similarity=-0.092 Sum_probs=41.4
Q ss_pred ccCCeEEEEeCCHHHHHHhhcCCCceEEecCCCCcchhhccCCCCCCceeeeeechhhccCChhHHHHHHHHHhcCCCeE
Q 035840 3 KIYKNVIATDTSPKQLEFAIKLPNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWFDLPQFYKQVKWVLKKPNGV 82 (213)
Q Consensus 3 ~~~~~V~gvD~S~~ml~~Ar~~~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~d~~~~~~e~~rvLk~pgG~ 82 (213)
....+|+++|.+++-++.++...++....++.... ..+... .-..+|+|+.+..-. .......++.+-+. |...
T Consensus 40 ~~g~~V~vid~~~~~~~~~~~~~g~~~~~~d~~~~-~~l~~~--~~~~ad~Vi~~~~~~--~~~~~~~~~~~~~~-~~~~ 113 (155)
T 2g1u_A 40 SSGHSVVVVDKNEYAFHRLNSEFSGFTVVGDAAEF-ETLKEC--GMEKADMVFAFTNDD--STNFFISMNARYMF-NVEN 113 (155)
T ss_dssp HTTCEEEEEESCGGGGGGSCTTCCSEEEESCTTSH-HHHHTT--TGGGCSEEEECSSCH--HHHHHHHHHHHHTS-CCSE
T ss_pred hCCCeEEEEECCHHHHHHHHhcCCCcEEEecCCCH-HHHHHc--CcccCCEEEEEeCCc--HHHHHHHHHHHHHC-CCCe
Confidence 34568999999998887766223555666654211 112221 123589988775431 11233334444444 4445
Q ss_pred EEEE
Q 035840 83 IAAW 86 (213)
Q Consensus 83 l~~~ 86 (213)
+...
T Consensus 114 iv~~ 117 (155)
T 2g1u_A 114 VIAR 117 (155)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 5443
No 395
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=34.05 E-value=59 Score=27.56 Aligned_cols=21 Identities=19% Similarity=0.306 Sum_probs=17.6
Q ss_pred cccCCeEEEEeCCHHHHHHhhc
Q 035840 2 AKIYKNVIATDTSPKQLEFAIK 23 (213)
Q Consensus 2 a~~~~~V~gvD~S~~ml~~Ar~ 23 (213)
|. ..+|+++|.+++-++..++
T Consensus 56 a~-G~~V~~~D~~~~~v~~l~~ 76 (432)
T 3pid_A 56 AQ-NHEVVALDIVQAKVDMLNQ 76 (432)
T ss_dssp HT-TSEEEEECSCHHHHHHHHT
T ss_pred Hc-CCeEEEEecCHHHhhHHhc
Confidence 44 6789999999999988775
No 396
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=33.59 E-value=1.2e+02 Score=26.33 Aligned_cols=75 Identities=12% Similarity=0.096 Sum_probs=45.3
Q ss_pred CeEEEEeCCHHHHHHhhc------CCCceEEecCCCCcchhhccCC----CCCCceeeeeechhh--ccC----------
Q 035840 6 KNVIATDTSPKQLEFAIK------LPNIRYQLTPPTMSITELEQNV----ATQSSVDLVTIAAAL--HWF---------- 63 (213)
Q Consensus 6 ~~V~gvD~S~~ml~~Ar~------~~~v~~~~~~~~~~~~d~~~~~----~~~~sfDlV~~~~~~--hw~---------- 63 (213)
..++|+|+.+.+...|+. .....+..++. -..| .+...||+|+++==+ .|-
T Consensus 255 ~~i~G~E~~~~~~~la~mNl~lhg~~~~~I~~~dt-------L~~~~~~~~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~ 327 (530)
T 3ufb_A 255 SSIFGGEAKSLPYLLVQMNLLLHGLEYPRIDPENS-------LRFPLREMGDKDRVDVILTNPPFGGEEEKGILGNFPED 327 (530)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHHTCSCCEEECSCT-------TCSCGGGCCGGGCBSEEEECCCSSCBCCHHHHTTSCGG
T ss_pred hhhhhhhccHHHHHHHHHHHHhcCCcccccccccc-------ccCchhhhcccccceEEEecCCCCccccccccccCchh
Confidence 468999999999999985 12233445543 2212 234579999964222 221
Q ss_pred ----Ch-hHHHHHHHHHhcC------CCeEEEEEe
Q 035840 64 ----DL-PQFYKQVKWVLKK------PNGVIAAWT 87 (213)
Q Consensus 64 ----d~-~~~~~e~~rvLk~------pgG~l~~~~ 87 (213)
+. -.++..+.+.||. |||++++..
T Consensus 328 ~~~~~~~~~Fl~~~l~~Lk~~~~~l~~gGr~avVl 362 (530)
T 3ufb_A 328 MQTAETAMLFLQLIMRKLKRPGHGSDNGGRAAVVV 362 (530)
T ss_dssp GCCCBHHHHHHHHHHHHBCCTTSSSSSCCEEEEEE
T ss_pred cccchhHHHHHHHHHHHhhhhhhccCCCceEEEEe
Confidence 11 1245777777761 599998653
No 397
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=31.57 E-value=49 Score=28.58 Aligned_cols=67 Identities=13% Similarity=0.030 Sum_probs=44.0
Q ss_pred CCeEEEEeCCHHHHHHhhcCCCceEEecCCCCcchhhccCCCCCCceeeeeechhhcc-CChhHHHHHHHHHhcCCCeEE
Q 035840 5 YKNVIATDTSPKQLEFAIKLPNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHW-FDLPQFYKQVKWVLKKPNGVI 83 (213)
Q Consensus 5 ~~~V~gvD~S~~ml~~Ar~~~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw-~d~~~~~~e~~rvLk~pgG~l 83 (213)
..+|+++|+++.-++.|++. ++++ .+. ++. + ...|+|+.+..-.- ++ .+..+.+| |||.+
T Consensus 297 Ga~Viv~d~~~~~~~~A~~~-Ga~~--~~l-------~e~-l--~~aDvVi~atgt~~~i~-----~~~l~~mk-~ggil 357 (494)
T 3ce6_A 297 GARVSVTEIDPINALQAMME-GFDV--VTV-------EEA-I--GDADIVVTATGNKDIIM-----LEHIKAMK-DHAIL 357 (494)
T ss_dssp TCEEEEECSCHHHHHHHHHT-TCEE--CCH-------HHH-G--GGCSEEEECSSSSCSBC-----HHHHHHSC-TTCEE
T ss_pred CCEEEEEeCCHHHHHHHHHc-CCEE--ecH-------HHH-H--hCCCEEEECCCCHHHHH-----HHHHHhcC-CCcEE
Confidence 45899999999988888765 3332 122 222 1 35899997654322 23 36777899 99999
Q ss_pred EEEeCCC
Q 035840 84 AAWTYTM 90 (213)
Q Consensus 84 ~~~~~~~ 90 (213)
+......
T Consensus 358 vnvG~~~ 364 (494)
T 3ce6_A 358 GNIGHFD 364 (494)
T ss_dssp EECSSSG
T ss_pred EEeCCCC
Confidence 7666553
No 398
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=30.32 E-value=60 Score=23.99 Aligned_cols=79 Identities=13% Similarity=-0.025 Sum_probs=47.4
Q ss_pred cccCCeEEEEeCCHHHHHHhhcCCCceEEecCCCCcchhhccCCCCCCceeeeeechhhccCChhHHHHHHHHHhcCCCe
Q 035840 2 AKIYKNVIATDTSPKQLEFAIKLPNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWFDLPQFYKQVKWVLKKPNG 81 (213)
Q Consensus 2 a~~~~~V~gvD~S~~ml~~Ar~~~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~d~~~~~~e~~rvLk~pgG 81 (213)
.....+|+++|.+++.++...+..++.+..+++... ..+++.. -...|+|+++..-. ........+++-+. |..
T Consensus 20 ~~~g~~v~vid~~~~~~~~l~~~~~~~~i~gd~~~~-~~l~~a~--i~~ad~vi~~~~~d--~~n~~~~~~a~~~~-~~~ 93 (218)
T 3l4b_C 20 LSRKYGVVIINKDRELCEEFAKKLKATIIHGDGSHK-EILRDAE--VSKNDVVVILTPRD--EVNLFIAQLVMKDF-GVK 93 (218)
T ss_dssp HHTTCCEEEEESCHHHHHHHHHHSSSEEEESCTTSH-HHHHHHT--CCTTCEEEECCSCH--HHHHHHHHHHHHTS-CCC
T ss_pred HhCCCeEEEEECCHHHHHHHHHHcCCeEEEcCCCCH-HHHHhcC--cccCCEEEEecCCc--HHHHHHHHHHHHHc-CCC
Confidence 345679999999999988755434677888887321 1122222 23578888765432 12334455666666 566
Q ss_pred EEEEE
Q 035840 82 VIAAW 86 (213)
Q Consensus 82 ~l~~~ 86 (213)
.+...
T Consensus 94 ~iia~ 98 (218)
T 3l4b_C 94 RVVSL 98 (218)
T ss_dssp EEEEC
T ss_pred eEEEE
Confidence 65443
No 399
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=29.95 E-value=58 Score=24.89 Aligned_cols=68 Identities=6% Similarity=0.000 Sum_probs=42.0
Q ss_pred EEEEeCCHHHHHHhhcCCCceEEecCCCCcchhhccCCCCCCceeeeeechhhccCChhHHHHHHHHHhcCCCeEEEEEe
Q 035840 8 VIATDTSPKQLEFAIKLPNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWFDLPQFYKQVKWVLKKPNGVIAAWT 87 (213)
Q Consensus 8 V~gvD~S~~ml~~Ar~~~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~d~~~~~~e~~rvLk~pgG~l~~~~ 87 (213)
|+++|.+++.++.+.+.-++... .+. ++. +. ..|+|+.+..-. ....++.++...++ +|..++..+
T Consensus 37 v~~~~~~~~~~~~~~~~~g~~~~-~~~-------~~~-~~--~~Dvvi~av~~~--~~~~v~~~l~~~~~-~~~ivv~~s 102 (266)
T 3d1l_A 37 VQVYSRTEESARELAQKVEAEYT-TDL-------AEV-NP--YAKLYIVSLKDS--AFAELLQGIVEGKR-EEALMVHTA 102 (266)
T ss_dssp EEEECSSHHHHHHHHHHTTCEEE-SCG-------GGS-CS--CCSEEEECCCHH--HHHHHHHHHHTTCC-TTCEEEECC
T ss_pred EEEEeCCHHHHHHHHHHcCCcee-CCH-------HHH-hc--CCCEEEEecCHH--HHHHHHHHHHhhcC-CCcEEEECC
Confidence 89999999988776653244332 122 332 22 479999776554 23667777777788 776654443
Q ss_pred CC
Q 035840 88 YT 89 (213)
Q Consensus 88 ~~ 89 (213)
.+
T Consensus 103 ~~ 104 (266)
T 3d1l_A 103 GS 104 (266)
T ss_dssp TT
T ss_pred CC
Confidence 33
No 400
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=29.71 E-value=1.1e+02 Score=25.91 Aligned_cols=71 Identities=25% Similarity=0.374 Sum_probs=42.4
Q ss_pred cccCCeEEEEeCCHHHHHHhhcC--------------C-----C--ceEEecCCCCcchhhccCCCCCCceeeeeechhh
Q 035840 2 AKIYKNVIATDTSPKQLEFAIKL--------------P-----N--IRYQLTPPTMSITELEQNVATQSSVDLVTIAAAL 60 (213)
Q Consensus 2 a~~~~~V~gvD~S~~ml~~Ar~~--------------~-----~--v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~ 60 (213)
+....+|+++|.+++.++.+++. . . .+. ..+ ++. + ...|+|+.+-.-
T Consensus 57 a~~G~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i-~~~-------~~~--~--~~aDlVIeaVpe 124 (463)
T 1zcj_A 57 ARVGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRF-SSS-------TKE--L--STVDLVVEAVFE 124 (463)
T ss_dssp HTTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEE-ESC-------GGG--G--TTCSEEEECCCS
T ss_pred HhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhh-cCC-------HHH--H--CCCCEEEEcCCC
Confidence 45566899999999988876531 0 0 111 111 122 1 247999866532
Q ss_pred ccCChhHHHHHHHHHhcCCCeEEEE
Q 035840 61 HWFDLPQFYKQVKWVLKKPNGVIAA 85 (213)
Q Consensus 61 hw~d~~~~~~e~~rvLk~pgG~l~~ 85 (213)
..--...+++++..+++ ||..|+.
T Consensus 125 ~~~~k~~v~~~l~~~~~-~~~ii~s 148 (463)
T 1zcj_A 125 DMNLKKKVFAELSALCK-PGAFLCT 148 (463)
T ss_dssp CHHHHHHHHHHHHHHSC-TTCEEEE
T ss_pred CHHHHHHHHHHHHhhCC-CCeEEEe
Confidence 11012577888999999 8866643
No 401
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=29.36 E-value=1.1e+02 Score=22.22 Aligned_cols=78 Identities=17% Similarity=0.172 Sum_probs=47.6
Q ss_pred cccCCeEEEEeCCHHHHHHhhcCCCceEEecCCCCcchhhccCCCCCCceeeeeechhhccC-----ChhHHHHHHHHHh
Q 035840 2 AKIYKNVIATDTSPKQLEFAIKLPNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWF-----DLPQFYKQVKWVL 76 (213)
Q Consensus 2 a~~~~~V~gvD~S~~ml~~Ar~~~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~-----d~~~~~~e~~rvL 76 (213)
+....+|++++-++.-+.... .+++++..+|.... +. -.-..+|.|+.+.+..|- ........+.+.+
T Consensus 21 ~~~g~~V~~~~R~~~~~~~~~-~~~~~~~~~D~~d~----~~--~~~~~~d~vi~~ag~~~~~~~~~~n~~~~~~l~~a~ 93 (224)
T 3h2s_A 21 RRRGHEVLAVVRDPQKAADRL-GATVATLVKEPLVL----TE--ADLDSVDAVVDALSVPWGSGRGYLHLDFATHLVSLL 93 (224)
T ss_dssp HHTTCEEEEEESCHHHHHHHT-CTTSEEEECCGGGC----CH--HHHTTCSEEEECCCCCTTSSCTHHHHHHHHHHHHTC
T ss_pred HHCCCEEEEEEeccccccccc-CCCceEEecccccc----cH--hhcccCCEEEECCccCCCcchhhHHHHHHHHHHHHH
Confidence 455779999999988766543 25788888776321 11 111348999977777553 1233446666666
Q ss_pred cCCCeEEEEE
Q 035840 77 KKPNGVIAAW 86 (213)
Q Consensus 77 k~pgG~l~~~ 86 (213)
++.|+++.+.
T Consensus 94 ~~~~~~~v~~ 103 (224)
T 3h2s_A 94 RNSDTLAVFI 103 (224)
T ss_dssp TTCCCEEEEE
T ss_pred HHcCCcEEEE
Confidence 6245566654
No 402
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=28.64 E-value=1.9e+02 Score=21.83 Aligned_cols=50 Identities=24% Similarity=0.191 Sum_probs=34.5
Q ss_pred cccCCeEEEEeCCHHHHHHhhcCCCceEEecCCCCcchhhccCCCCCCceeeeeechhhc
Q 035840 2 AKIYKNVIATDTSPKQLEFAIKLPNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALH 61 (213)
Q Consensus 2 a~~~~~V~gvD~S~~ml~~Ar~~~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~h 61 (213)
.....+|++++-++.-...... .++++..+|. .++. -..+|.|+.+.+..
T Consensus 25 ~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~D~-------~d~~--~~~~d~vi~~a~~~ 74 (286)
T 3ius_A 25 APQGWRIIGTSRNPDQMEAIRA-SGAEPLLWPG-------EEPS--LDGVTHLLISTAPD 74 (286)
T ss_dssp GGGTCEEEEEESCGGGHHHHHH-TTEEEEESSS-------SCCC--CTTCCEEEECCCCB
T ss_pred HHCCCEEEEEEcChhhhhhHhh-CCCeEEEecc-------cccc--cCCCCEEEECCCcc
Confidence 4556799999999876655433 4788888877 3333 34589999766654
No 403
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=26.92 E-value=71 Score=26.38 Aligned_cols=82 Identities=10% Similarity=0.079 Sum_probs=46.7
Q ss_pred CCeEEEEeCCHHHHHHhhc-CCCceEEecCCCCcch-hhccCCCCCCceeeeee---chhhccC------C-hhHHHHHH
Q 035840 5 YKNVIATDTSPKQLEFAIK-LPNIRYQLTPPTMSIT-ELEQNVATQSSVDLVTI---AAALHWF------D-LPQFYKQV 72 (213)
Q Consensus 5 ~~~V~gvD~S~~ml~~Ar~-~~~v~~~~~~~~~~~~-d~~~~~~~~~sfDlV~~---~~~~hw~------d-~~~~~~e~ 72 (213)
+..|.|+|+++..++..+. .++..+..+|+..+.. ++.........+|+|+. ||.|--. | +...+.++
T Consensus 24 ~~~v~avE~d~~a~~t~~~N~~~~~~~~~DI~~~~~~~~~~~~~~~~~~D~i~ggpPCQ~fS~ag~~~~~d~r~~L~~~~ 103 (376)
T 3g7u_A 24 FDVKMAVEIDQHAINTHAINFPRSLHVQEDVSLLNAEIIKGFFKNDMPIDGIIGGPPCQGFSSIGKGNPDDSRNQLYMHF 103 (376)
T ss_dssp CEEEEEECSCHHHHHHHHHHCTTSEEECCCGGGCCHHHHHHHHCSCCCCCEEEECCCCCTTC-------CHHHHHHHHHH
T ss_pred CcEEEEEeCCHHHHHHHHHhCCCCceEecChhhcCHHHHHhhcccCCCeeEEEecCCCCCcccccCCCCCCchHHHHHHH
Confidence 4467899999999988876 5777777777632211 11100113457999994 4555322 2 23455665
Q ss_pred HHH---hcCCCeEEEEEeCC
Q 035840 73 KWV---LKKPNGVIAAWTYT 89 (213)
Q Consensus 73 ~rv---Lk~pgG~l~~~~~~ 89 (213)
.|+ ++ |. +.+..+.
T Consensus 104 ~~~v~~~~-P~--~~v~ENV 120 (376)
T 3g7u_A 104 YRLVSELQ-PL--FFLAENV 120 (376)
T ss_dssp HHHHHHHC-CS--EEEEEEC
T ss_pred HHHHHHhC-CC--EEEEecc
Confidence 555 46 64 3344444
No 404
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=26.60 E-value=38 Score=27.35 Aligned_cols=71 Identities=15% Similarity=0.055 Sum_probs=41.9
Q ss_pred cccCCeEEEEeCCHHHHHHhhcC--------------C----------CceEEecCCCCcchhhccCCCCCCceeeeeec
Q 035840 2 AKIYKNVIATDTSPKQLEFAIKL--------------P----------NIRYQLTPPTMSITELEQNVATQSSVDLVTIA 57 (213)
Q Consensus 2 a~~~~~V~gvD~S~~ml~~Ar~~--------------~----------~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~ 57 (213)
+....+|++.|++++.++.+++. + ++++.. + +++. + ...|+|+.+
T Consensus 26 a~~G~~V~l~d~~~~~~~~~~~~i~~~l~~l~~~G~~~g~~~~~~~~~~i~~~~-~-------~~ea-v--~~aDlViea 94 (319)
T 2dpo_A 26 ASGGFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSCT-N-------LAEA-V--EGVVHIQEC 94 (319)
T ss_dssp HHTTCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEEC-C-------HHHH-T--TTEEEEEEC
T ss_pred HHCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHcCccccccchHHHhhceEEeC-C-------HHHH-H--hcCCEEEEe
Confidence 45567999999999999887531 0 122211 1 1211 1 237888865
Q ss_pred hhhccCChhHHHHHHHHHhcCCCeEEE
Q 035840 58 AALHWFDLPQFYKQVKWVLKKPNGVIA 84 (213)
Q Consensus 58 ~~~hw~d~~~~~~e~~rvLk~pgG~l~ 84 (213)
---.---...++.++...++ ||..|+
T Consensus 95 vpe~~~~k~~v~~~l~~~~~-~~~Ii~ 120 (319)
T 2dpo_A 95 VPENLDLKRKIFAQLDSIVD-DRVVLS 120 (319)
T ss_dssp CCSCHHHHHHHHHHHHTTCC-SSSEEE
T ss_pred ccCCHHHHHHHHHHHHhhCC-CCeEEE
Confidence 42111013467788888889 786554
No 405
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=26.49 E-value=22 Score=27.99 Aligned_cols=88 Identities=11% Similarity=-0.000 Sum_probs=49.7
Q ss_pred CeEEEEeCCHHHHHHhh---c--CCCceEEec-CCCCcchhhccCCCCCCceeeeeechhh----ccCChhH---HHHHH
Q 035840 6 KNVIATDTSPKQLEFAI---K--LPNIRYQLT-PPTMSITELEQNVATQSSVDLVTIAAAL----HWFDLPQ---FYKQV 72 (213)
Q Consensus 6 ~~V~gvD~S~~ml~~Ar---~--~~~v~~~~~-~~~~~~~d~~~~~~~~~sfDlV~~~~~~----hw~d~~~---~~~e~ 72 (213)
.+|+|+|+.+.-.+.=+ . .+.++|..+ |. ..+ ++..+|.|+|-.+= .++|... ++.-+
T Consensus 103 ~~V~avdvG~~ghe~P~~~~s~gwn~v~fk~gvDv-------~~~--~~~~~DtllcDIgeSs~~~~vE~~RtlrvLela 173 (267)
T 3p8z_A 103 TEVRGYTKGGPGHEEPVPMSTYGWNIVKLMSGKDV-------FYL--PPEKCDTLLCDIGESSPSPTVEESRTIRVLKMV 173 (267)
T ss_dssp EEEEEECCCSTTSCCCCCCCCTTTTSEEEECSCCG-------GGC--CCCCCSEEEECCCCCCSCHHHHHHHHHHHHHHH
T ss_pred CEEEEEecCCCCccCcchhhhcCcCceEEEeccce-------eec--CCccccEEEEecCCCCCChhhhhhHHHHHHHHH
Confidence 47999999866443211 1 257888887 54 443 33569999953322 3446655 45555
Q ss_pred HHHhcCCCeEEEE--EeCCCCCcChHHHHhcccc
Q 035840 73 KWVLKKPNGVIAA--WTYTMPEINESVGAVFKPF 104 (213)
Q Consensus 73 ~rvLk~pgG~l~~--~~~~~~~~~~~~~~~~~~~ 104 (213)
-+.|+ + |.|++ .+-..|.+...++.+-..|
T Consensus 174 ~~wL~-~-~~fc~KVl~py~p~v~e~l~~lq~~f 205 (267)
T 3p8z_A 174 EPWLK-N-NQFCIKVLNPYMPTVIEHLERLQRKH 205 (267)
T ss_dssp GGGCS-S-CEEEEEESCCCSHHHHHHHHHHHHHH
T ss_pred HHhcc-c-CCEEEEEccCCChhHHHHHHHHHHHh
Confidence 68889 8 66664 3333343434444433333
No 406
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=24.26 E-value=37 Score=27.89 Aligned_cols=76 Identities=11% Similarity=0.052 Sum_probs=46.6
Q ss_pred cccCCeEEEEeCCHHHHHHhhcCCCceEEecCCCCcchhhccCCCCCCceeeeeechhhccCChhHHHHHHHHHhcCCCe
Q 035840 2 AKIYKNVIATDTSPKQLEFAIKLPNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWFDLPQFYKQVKWVLKKPNG 81 (213)
Q Consensus 2 a~~~~~V~gvD~S~~ml~~Ar~~~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~d~~~~~~e~~rvLk~pgG 81 (213)
+....+|++.|.+++-++.+.+. ++... . ++++.--.-...|+|+.+-.-. ....++.++...|+ ||.
T Consensus 42 ~~~G~~V~v~dr~~~~~~~l~~~-g~~~~-~-------s~~e~~~~a~~~DvVi~~vp~~--~v~~vl~~l~~~l~-~g~ 109 (358)
T 4e21_A 42 RKGGHECVVYDLNVNAVQALERE-GIAGA-R-------SIEEFCAKLVKPRVVWLMVPAA--VVDSMLQRMTPLLA-AND 109 (358)
T ss_dssp HHTTCEEEEECSCHHHHHHHHTT-TCBCC-S-------SHHHHHHHSCSSCEEEECSCGG--GHHHHHHHHGGGCC-TTC
T ss_pred HhCCCEEEEEeCCHHHHHHHHHC-CCEEe-C-------CHHHHHhcCCCCCEEEEeCCHH--HHHHHHHHHHhhCC-CCC
Confidence 44567899999999988887754 22211 1 1122100112358888766555 66777888888888 776
Q ss_pred EEEEEeCC
Q 035840 82 VIAAWTYT 89 (213)
Q Consensus 82 ~l~~~~~~ 89 (213)
.++-.+..
T Consensus 110 iiId~st~ 117 (358)
T 4e21_A 110 IVIDGGNS 117 (358)
T ss_dssp EEEECSSC
T ss_pred EEEeCCCC
Confidence 66433333
No 407
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=23.31 E-value=99 Score=23.92 Aligned_cols=66 Identities=12% Similarity=0.174 Sum_probs=41.0
Q ss_pred ccCCeEEEEeCCHHHHHHhhcCCCceEEecCCCCcchhhccCCCCCCceeeeeechhhccCChhHHHHHHHHHhcCCCeE
Q 035840 3 KIYKNVIATDTSPKQLEFAIKLPNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWFDLPQFYKQVKWVLKKPNGV 82 (213)
Q Consensus 3 ~~~~~V~gvD~S~~ml~~Ar~~~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~d~~~~~~e~~rvLk~pgG~ 82 (213)
....+|+++|.+++-++.+++. ++.. .+. .+. + ...|+|+.+.--.- ...++.++...++ ||..
T Consensus 33 ~~g~~V~~~~r~~~~~~~~~~~-g~~~--~~~-------~~~-~--~~aDvVi~av~~~~--~~~v~~~l~~~l~-~~~i 96 (286)
T 3c24_A 33 DSAHHLAAIEIAPEGRDRLQGM-GIPL--TDG-------DGW-I--DEADVVVLALPDNI--IEKVAEDIVPRVR-PGTI 96 (286)
T ss_dssp HSSSEEEEECCSHHHHHHHHHT-TCCC--CCS-------SGG-G--GTCSEEEECSCHHH--HHHHHHHHGGGSC-TTCE
T ss_pred hCCCEEEEEECCHHHHHHHHhc-CCCc--CCH-------HHH-h--cCCCEEEEcCCchH--HHHHHHHHHHhCC-CCCE
Confidence 3455899999999988877653 3221 111 111 1 24799987665433 4667777777788 7765
Q ss_pred EE
Q 035840 83 IA 84 (213)
Q Consensus 83 l~ 84 (213)
++
T Consensus 97 vv 98 (286)
T 3c24_A 97 VL 98 (286)
T ss_dssp EE
T ss_pred EE
Confidence 53
No 408
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=23.25 E-value=1.5e+02 Score=22.84 Aligned_cols=80 Identities=14% Similarity=0.140 Sum_probs=44.5
Q ss_pred cccCCeEEEEeCCHHHHHHhhcCCCceEEec------CCCCcchhhccCCCCCCceeeeeechhhccCChhHHHHHHHHH
Q 035840 2 AKIYKNVIATDTSPKQLEFAIKLPNIRYQLT------PPTMSITELEQNVATQSSVDLVTIAAALHWFDLPQFYKQVKWV 75 (213)
Q Consensus 2 a~~~~~V~gvD~S~~ml~~Ar~~~~v~~~~~------~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~d~~~~~~e~~rv 75 (213)
+....+|+++|.+++.++..++. ++..... .... .+.++..-.-...|+|+.+.--+ ....++.++...
T Consensus 23 ~~~g~~V~~~~r~~~~~~~~~~~-g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~d~vi~~v~~~--~~~~v~~~l~~~ 97 (316)
T 2ew2_A 23 HQGGNDVTLIDQWPAHIEAIRKN-GLIADFNGEEVVANLPI--FSPEEIDHQNEQVDLIIALTKAQ--QLDAMFKAIQPM 97 (316)
T ss_dssp HHTTCEEEEECSCHHHHHHHHHH-CEEEEETTEEEEECCCE--ECGGGCCTTSCCCSEEEECSCHH--HHHHHHHHHGGG
T ss_pred HhCCCcEEEEECCHHHHHHHHhC-CEEEEeCCCeeEeccee--ecchhhcccCCCCCEEEEEeccc--cHHHHHHHHHHh
Confidence 34556899999999888876653 2222210 0100 00011100012589998766543 346777888888
Q ss_pred hcCCCeEEEEEe
Q 035840 76 LKKPNGVIAAWT 87 (213)
Q Consensus 76 Lk~pgG~l~~~~ 87 (213)
++ ||..++...
T Consensus 98 l~-~~~~iv~~~ 108 (316)
T 2ew2_A 98 IT-EKTYVLCLL 108 (316)
T ss_dssp CC-TTCEEEECC
T ss_pred cC-CCCEEEEec
Confidence 88 776665433
No 409
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=21.97 E-value=10 Score=31.24 Aligned_cols=78 Identities=14% Similarity=0.102 Sum_probs=44.9
Q ss_pred cCCeEEEEeCCHHHHHHhhcC--CCceEEecCCCCcchhhccCCCCCCceeeeeechhhccC-ChhHHHHHHHHHhcCCC
Q 035840 4 IYKNVIATDTSPKQLEFAIKL--PNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWF-DLPQFYKQVKWVLKKPN 80 (213)
Q Consensus 4 ~~~~V~gvD~S~~ml~~Ar~~--~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~-d~~~~~~e~~rvLk~pg 80 (213)
...+|+++|.+++-++.+++. ..+.....+. .++.+. + ..+|+|+.+....-. .+.-..+++.+.++ ||
T Consensus 189 ~Ga~V~v~dr~~~r~~~~~~~~~~~~~~~~~~~----~~~~~~-~--~~~DvVI~~~~~~~~~~~~li~~~~~~~~~-~g 260 (361)
T 1pjc_A 189 LGAQVQIFDINVERLSYLETLFGSRVELLYSNS----AEIETA-V--AEADLLIGAVLVPGRRAPILVPASLVEQMR-TG 260 (361)
T ss_dssp TTCEEEEEESCHHHHHHHHHHHGGGSEEEECCH----HHHHHH-H--HTCSEEEECCCCTTSSCCCCBCHHHHTTSC-TT
T ss_pred CCCEEEEEeCCHHHHHHHHHhhCceeEeeeCCH----HHHHHH-H--cCCCEEEECCCcCCCCCCeecCHHHHhhCC-CC
Confidence 345899999999988887653 1221221111 112211 1 248999876655321 12112456778899 99
Q ss_pred eEEEEEeCC
Q 035840 81 GVIAAWTYT 89 (213)
Q Consensus 81 G~l~~~~~~ 89 (213)
|.++...+.
T Consensus 261 ~~ivdv~~~ 269 (361)
T 1pjc_A 261 SVIVDVAVD 269 (361)
T ss_dssp CEEEETTCT
T ss_pred CEEEEEecC
Confidence 998766554
No 410
>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}
Probab=21.82 E-value=42 Score=27.48 Aligned_cols=21 Identities=5% Similarity=-0.061 Sum_probs=18.5
Q ss_pred CCeEEEEeCCHHHHHHhhcCC
Q 035840 5 YKNVIATDTSPKQLEFAIKLP 25 (213)
Q Consensus 5 ~~~V~gvD~S~~ml~~Ar~~~ 25 (213)
..+|+++|.|++-++.+++..
T Consensus 196 Ga~Vi~~~~~~~~~~~~~~lG 216 (379)
T 3iup_A 196 GIKLVNIVRKQEQADLLKAQG 216 (379)
T ss_dssp TCCEEEEESSHHHHHHHHHTT
T ss_pred CCEEEEEECCHHHHHHHHhCC
Confidence 568999999999999999863
No 411
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=21.53 E-value=1e+02 Score=24.12 Aligned_cols=69 Identities=9% Similarity=-0.010 Sum_probs=43.0
Q ss_pred CCeEEEEeCCHHHHHHhhcCCCceEEecCCCCcchhhccCCCCCCceeeeeechhhccCChhHHHHHHHHHhcCCCeEEE
Q 035840 5 YKNVIATDTSPKQLEFAIKLPNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWFDLPQFYKQVKWVLKKPNGVIA 84 (213)
Q Consensus 5 ~~~V~gvD~S~~ml~~Ar~~~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~d~~~~~~e~~rvLk~pgG~l~ 84 (213)
..+|+++|+++.-.+.+.+. ++.+... .++++. + ...|+|+.+...+.++. +....+| ||+.++
T Consensus 178 G~~V~~~dr~~~~~~~~~~~-g~~~~~~------~~l~~~-l--~~aDvVi~~~p~~~i~~-----~~l~~mk-~~~~li 241 (293)
T 3d4o_A 178 GAKVKVGARESDLLARIAEM-GMEPFHI------SKAAQE-L--RDVDVCINTIPALVVTA-----NVLAEMP-SHTFVI 241 (293)
T ss_dssp TCEEEEEESSHHHHHHHHHT-TSEEEEG------GGHHHH-T--TTCSEEEECCSSCCBCH-----HHHHHSC-TTCEEE
T ss_pred CCEEEEEECCHHHHHHHHHC-CCeecCh------hhHHHH-h--cCCCEEEECCChHHhCH-----HHHHhcC-CCCEEE
Confidence 45899999999876665543 3443211 122332 2 34899998877766654 3456789 898886
Q ss_pred EEeCC
Q 035840 85 AWTYT 89 (213)
Q Consensus 85 ~~~~~ 89 (213)
-...+
T Consensus 242 n~ar~ 246 (293)
T 3d4o_A 242 DLASK 246 (293)
T ss_dssp ECSST
T ss_pred EecCC
Confidence 55544
No 412
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=21.31 E-value=29 Score=27.37 Aligned_cols=75 Identities=13% Similarity=0.084 Sum_probs=44.3
Q ss_pred cccCCeEEEEeCCHHHHHHhhcCCCceEEecCCCCcchhhccCCCCCCceeeeeechhhccCChhHHHHHHHHHhcCCCe
Q 035840 2 AKIYKNVIATDTSPKQLEFAIKLPNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWFDLPQFYKQVKWVLKKPNG 81 (213)
Q Consensus 2 a~~~~~V~gvD~S~~ml~~Ar~~~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~d~~~~~~e~~rvLk~pgG 81 (213)
+....+|++.|.+++-++.+.+. ++.+. . +.++. .. .|+|+.+-.-. .+...++.++...++ ||.
T Consensus 35 ~~~G~~V~~~dr~~~~~~~~~~~-g~~~~-~-------~~~~~--~~--aDvvi~~vp~~-~~~~~v~~~l~~~l~-~g~ 99 (296)
T 3qha_A 35 TEWPGGVTVYDIRIEAMTPLAEA-GATLA-D-------SVADV--AA--ADLIHITVLDD-AQVREVVGELAGHAK-PGT 99 (296)
T ss_dssp TTSTTCEEEECSSTTTSHHHHHT-TCEEC-S-------SHHHH--TT--SSEEEECCSSH-HHHHHHHHHHHTTCC-TTC
T ss_pred HHCCCeEEEEeCCHHHHHHHHHC-CCEEc-C-------CHHHH--Hh--CCEEEEECCCh-HHHHHHHHHHHHhcC-CCC
Confidence 45567899999999888777654 33321 1 12332 12 68888654321 023456678888888 776
Q ss_pred EEEEEeCCCC
Q 035840 82 VIAAWTYTMP 91 (213)
Q Consensus 82 ~l~~~~~~~~ 91 (213)
.++..+...+
T Consensus 100 ivv~~st~~~ 109 (296)
T 3qha_A 100 VIAIHSTISD 109 (296)
T ss_dssp EEEECSCCCH
T ss_pred EEEEeCCCCH
Confidence 6644433333
No 413
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=21.23 E-value=1.5e+02 Score=19.51 Aligned_cols=78 Identities=13% Similarity=0.050 Sum_probs=43.5
Q ss_pred ccCCeEEEEeCCHHHHHHhhcCCCceEEecCCCCcchhhccCCCCCCceeeeeechhhccCChhHHHHHHHHHhcCCCeE
Q 035840 3 KIYKNVIATDTSPKQLEFAIKLPNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWFDLPQFYKQVKWVLKKPNGV 82 (213)
Q Consensus 3 ~~~~~V~gvD~S~~ml~~Ar~~~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~d~~~~~~e~~rvLk~pgG~ 82 (213)
....+|+++|.+++-++.+++. +..+..++... ...+++. .-..+|+|+.+..-.. +......+..+-+. ++ .
T Consensus 27 ~~g~~v~~~d~~~~~~~~~~~~-~~~~~~~d~~~-~~~l~~~--~~~~~d~vi~~~~~~~-~~~~~~~~~~~~~~-~~-~ 99 (144)
T 2hmt_A 27 RMGHEVLAVDINEEKVNAYASY-ATHAVIANATE-ENELLSL--GIRNFEYVIVAIGANI-QASTLTTLLLKELD-IP-N 99 (144)
T ss_dssp HTTCCCEEEESCHHHHHTTTTT-CSEEEECCTTC-HHHHHTT--TGGGCSEEEECCCSCH-HHHHHHHHHHHHTT-CS-E
T ss_pred HCCCEEEEEeCCHHHHHHHHHh-CCEEEEeCCCC-HHHHHhc--CCCCCCEEEECCCCch-HHHHHHHHHHHHcC-CC-e
Confidence 3456899999999888776643 34555555521 1112221 2345899987655311 12234555666677 65 5
Q ss_pred EEEEe
Q 035840 83 IAAWT 87 (213)
Q Consensus 83 l~~~~ 87 (213)
+....
T Consensus 100 ii~~~ 104 (144)
T 2hmt_A 100 IWVKA 104 (144)
T ss_dssp EEEEC
T ss_pred EEEEe
Confidence 54433
No 414
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=21.13 E-value=1.1e+02 Score=23.53 Aligned_cols=67 Identities=15% Similarity=0.158 Sum_probs=39.9
Q ss_pred CCeEEEEeCCHHHHHHhhcCCCceEEecCCCCcchhhccCCCCCCceeeeeechhhccCChhHHHHHHHHH-hcCCCeEE
Q 035840 5 YKNVIATDTSPKQLEFAIKLPNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWFDLPQFYKQVKWV-LKKPNGVI 83 (213)
Q Consensus 5 ~~~V~gvD~S~~ml~~Ar~~~~v~~~~~~~~~~~~d~~~~~~~~~sfDlV~~~~~~hw~d~~~~~~e~~rv-Lk~pgG~l 83 (213)
..+|+++|.+++.++.+++.........+. ++. + ...|+|+.+.--+-. ..++.++... ++ ||..+
T Consensus 31 ~~~V~~~d~~~~~~~~~~~~g~~~~~~~~~-------~~~-~--~~aDvVilavp~~~~--~~v~~~l~~~~l~-~~~iv 97 (290)
T 3b1f_A 31 HYKIVGYNRSDRSRDIALERGIVDEATADF-------KVF-A--ALADVIILAVPIKKT--IDFIKILADLDLK-EDVII 97 (290)
T ss_dssp TSEEEEECSSHHHHHHHHHTTSCSEEESCT-------TTT-G--GGCSEEEECSCHHHH--HHHHHHHHTSCCC-TTCEE
T ss_pred CcEEEEEcCCHHHHHHHHHcCCcccccCCH-------HHh-h--cCCCEEEEcCCHHHH--HHHHHHHHhcCCC-CCCEE
Confidence 358999999999888776542111112222 211 1 247999876654432 5667777777 78 66554
Q ss_pred E
Q 035840 84 A 84 (213)
Q Consensus 84 ~ 84 (213)
.
T Consensus 98 i 98 (290)
T 3b1f_A 98 T 98 (290)
T ss_dssp E
T ss_pred E
Confidence 3
No 415
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=21.03 E-value=22 Score=28.96 Aligned_cols=66 Identities=15% Similarity=0.135 Sum_probs=40.3
Q ss_pred CCeEEEEeCCHHHHHHhhc-CCCceEEecCCCCcchhhccCC---CCCCceeeeee---chhhcc------C-C-hhHHH
Q 035840 5 YKNVIATDTSPKQLEFAIK-LPNIRYQLTPPTMSITELEQNV---ATQSSVDLVTI---AAALHW------F-D-LPQFY 69 (213)
Q Consensus 5 ~~~V~gvD~S~~ml~~Ar~-~~~v~~~~~~~~~~~~d~~~~~---~~~~sfDlV~~---~~~~hw------~-d-~~~~~ 69 (213)
+..|.++|+++..++..+. .++..+..+|+ .++. ++...+|+|+. ||.|.- . | +...+
T Consensus 26 ~~~v~~~E~d~~a~~~~~~N~~~~~~~~~Di-------~~~~~~~~~~~~~D~l~~gpPCq~fS~ag~~~g~~d~r~~l~ 98 (343)
T 1g55_A 26 AQVVAAIDVNTVANEVYKYNFPHTQLLAKTI-------EGITLEEFDRLSFDMILMSPPCQPFTRIGRQGDMTDSRTNSF 98 (343)
T ss_dssp EEEEEEECCCHHHHHHHHHHCTTSCEECSCG-------GGCCHHHHHHHCCSEEEECCC------------------CHH
T ss_pred ceEEEEEeCCHHHHHHHHHhccccccccCCH-------HHccHhHcCcCCcCEEEEcCCCcchhhcCCcCCccCccchHH
Confidence 4579999999999999887 46666667666 3332 11125899995 344422 1 2 33577
Q ss_pred HHHHHHhc
Q 035840 70 KQVKWVLK 77 (213)
Q Consensus 70 ~e~~rvLk 77 (213)
.++.|+++
T Consensus 99 ~~~~~~i~ 106 (343)
T 1g55_A 99 LHILDILP 106 (343)
T ss_dssp HHHHHHGG
T ss_pred HHHHHHHH
Confidence 88888887
No 416
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=20.88 E-value=2.2e+02 Score=24.30 Aligned_cols=45 Identities=27% Similarity=0.263 Sum_probs=26.6
Q ss_pred eeeeeechhhcc-------CC---hhHHHHHHHHHhcCCCeEEEEEeCCCCCcChH
Q 035840 51 VDLVTIAAALHW-------FD---LPQFYKQVKWVLKKPNGVIAAWTYTMPEINES 96 (213)
Q Consensus 51 fDlV~~~~~~hw-------~d---~~~~~~e~~rvLk~pgG~l~~~~~~~~~~~~~ 96 (213)
.|+|+.+-.-.. .| ...+...+.+.|+ ||..+...+...|.....
T Consensus 102 aDvViiaVptp~~~~~~~~~dl~~v~~~~~~i~~~l~-~g~iVV~~STv~pgtt~~ 156 (478)
T 3g79_A 102 LDAVTLAIQTPFANPKDLEPDFSALIDGIRNVGKYLK-PGMLVVLESTITPGTTEG 156 (478)
T ss_dssp CSEEEECCCCCCCSSCCSSCCCHHHHHHHHHHHHHCC-TTCEEEECSCCCTTTTTT
T ss_pred CCEEEEecCCchhccCCccccHHHHHHHHHHHHhhcC-CCcEEEEeCCCChHHHHH
Confidence 678876554433 23 3456688889999 787664444344444333
No 417
>2z30_B TK-subtilisin; thermococcus kodakaraensis, hydrolase; 1.65A {Thermococcus kodakarensis} PDB: 2z2y_B 3a3p_B 2z56_B 2z58_B 2z57_B 3a3n_B 3a3o_B
Probab=20.48 E-value=90 Score=18.46 Aligned_cols=28 Identities=11% Similarity=0.120 Sum_probs=23.3
Q ss_pred eEEEEeCCHHHHHHhhcCCCceEEecCC
Q 035840 7 NVIATDTSPKQLEFAIKLPNIRYQLTPP 34 (213)
Q Consensus 7 ~V~gvD~S~~ml~~Ar~~~~v~~~~~~~ 34 (213)
.+++++++++.++..+..|+++|+.-|.
T Consensus 33 ~a~~~~lp~~~~~~L~~~p~V~yVE~D~ 60 (65)
T 2z30_B 33 PAVVVDVPANAVGKLKKMPGVEKVEFDH 60 (65)
T ss_dssp SEEEEEECGGGHHHHHTSTTEEEEEECC
T ss_pred cEEEEEeCHHHHHHHhcCCCceEEecCc
Confidence 5678999999988888889999988654
Done!