Query 035842
Match_columns 82
No_of_seqs 108 out of 1108
Neff 11.8
Searched_HMMs 46136
Date Fri Mar 29 06:56:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/035842.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/035842hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG4412 26S proteasome regulat 99.9 9.3E-24 2E-28 105.6 5.9 21 5-25 72-92 (226)
2 KOG4412 26S proteasome regulat 99.9 2.8E-23 6.1E-28 103.9 6.2 77 2-79 103-179 (226)
3 KOG0509 Ankyrin repeat and DHH 99.9 7.7E-22 1.7E-26 112.3 7.5 75 6-81 113-187 (600)
4 KOG0509 Ankyrin repeat and DHH 99.9 7.1E-22 1.5E-26 112.4 6.9 80 2-81 75-154 (600)
5 PHA02884 ankyrin repeat protei 99.9 8.8E-21 1.9E-25 102.4 9.4 80 2-81 67-146 (300)
6 PHA02741 hypothetical protein; 99.8 4.1E-20 8.9E-25 93.3 9.4 80 1-81 56-141 (169)
7 PHA02743 Viral ankyrin protein 99.8 2.5E-20 5.3E-25 93.9 8.6 79 2-81 54-137 (166)
8 PHA02791 ankyrin-like protein; 99.8 3.2E-20 6.9E-25 99.9 9.3 77 2-81 27-103 (284)
9 PHA02878 ankyrin repeat protei 99.8 3E-20 6.5E-25 105.7 9.3 79 2-81 164-243 (477)
10 PHA02875 ankyrin repeat protei 99.8 4.2E-20 9.1E-25 103.5 9.4 79 2-81 99-177 (413)
11 KOG0512 Fetal globin-inducing 99.8 4.2E-20 9.2E-25 92.2 6.4 80 1-81 93-172 (228)
12 PHA02736 Viral ankyrin protein 99.8 3.4E-20 7.3E-25 92.4 6.0 79 2-81 52-135 (154)
13 PHA02741 hypothetical protein; 99.8 1.5E-19 3.2E-24 91.3 8.4 80 1-81 17-107 (169)
14 PF12796 Ank_2: Ankyrin repeat 99.8 3.1E-19 6.8E-24 81.8 8.5 68 9-81 1-68 (89)
15 PHA02791 ankyrin-like protein; 99.8 2E-19 4.4E-24 96.8 9.0 77 4-81 60-137 (284)
16 PHA02874 ankyrin repeat protei 99.8 2.4E-19 5.1E-24 101.1 9.5 79 2-81 121-199 (434)
17 PHA02859 ankyrin repeat protei 99.8 4E-19 8.6E-24 92.3 9.3 78 2-80 48-131 (209)
18 KOG0195 Integrin-linked kinase 99.8 5.8E-20 1.3E-24 98.1 6.1 78 2-80 31-108 (448)
19 PHA03095 ankyrin-like protein; 99.8 3.8E-19 8.2E-24 100.9 8.8 80 1-81 218-299 (471)
20 PHA02859 ankyrin repeat protei 99.8 8.2E-19 1.8E-23 91.2 9.2 78 2-80 120-200 (209)
21 PHA02874 ankyrin repeat protei 99.8 8.1E-19 1.8E-23 99.0 9.5 79 2-81 154-232 (434)
22 KOG4177 Ankyrin [Cell wall/mem 99.8 2.2E-19 4.7E-24 108.5 7.4 79 2-81 537-615 (1143)
23 PLN03192 Voltage-dependent pot 99.8 1E-18 2.2E-23 104.5 9.5 79 2-81 555-664 (823)
24 PHA02875 ankyrin repeat protei 99.8 1.4E-18 2.9E-23 97.5 9.4 78 4-81 67-144 (413)
25 KOG0502 Integral membrane anky 99.8 1E-19 2.2E-24 93.8 4.4 79 2-81 157-235 (296)
26 PF12796 Ank_2: Ankyrin repeat 99.8 1.8E-18 3.9E-23 79.3 7.5 64 5-69 26-89 (89)
27 PHA02878 ankyrin repeat protei 99.8 2.1E-18 4.6E-23 98.2 9.3 78 2-80 198-277 (477)
28 PHA02946 ankyin-like protein; 99.8 2.3E-18 5E-23 97.5 9.4 79 1-80 68-149 (446)
29 PHA03095 ankyrin-like protein; 99.8 1.9E-18 4.2E-23 98.0 9.1 78 2-80 44-125 (471)
30 PHA02884 ankyrin repeat protei 99.8 4.5E-18 9.7E-23 92.1 9.4 80 1-81 28-113 (300)
31 PHA02795 ankyrin-like protein; 99.8 2E-18 4.3E-23 96.9 8.1 76 5-81 188-263 (437)
32 PF13857 Ank_5: Ankyrin repeat 99.8 5.2E-19 1.1E-23 74.8 4.5 55 24-79 1-56 (56)
33 PF13637 Ank_4: Ankyrin repeat 99.8 2.9E-18 6.3E-23 72.1 6.5 54 5-59 1-54 (54)
34 PHA03100 ankyrin repeat protei 99.8 2.7E-18 5.9E-23 97.6 8.4 79 2-81 103-185 (480)
35 PHA02946 ankyin-like protein; 99.8 6.7E-18 1.4E-22 95.7 8.4 78 2-81 170-251 (446)
36 KOG4214 Myotrophin and similar 99.8 5.4E-18 1.2E-22 77.0 6.4 75 4-79 33-107 (117)
37 PHA02716 CPXV016; CPX019; EVM0 99.8 1E-17 2.2E-22 99.1 8.9 78 2-80 174-255 (764)
38 PHA02743 Viral ankyrin protein 99.8 1E-17 2.2E-22 84.5 7.5 79 2-81 17-103 (166)
39 PHA02798 ankyrin-like protein; 99.8 8.9E-18 1.9E-22 96.0 8.1 79 2-81 68-154 (489)
40 PHA02876 ankyrin repeat protei 99.8 1.4E-17 3E-22 98.1 8.9 78 2-80 372-450 (682)
41 PHA02716 CPXV016; CPX019; EVM0 99.8 1.6E-17 3.4E-22 98.3 9.1 78 2-80 209-325 (764)
42 PHA03100 ankyrin repeat protei 99.7 1.9E-17 4.2E-22 94.2 8.9 75 6-81 216-292 (480)
43 PHA02989 ankyrin repeat protei 99.7 1.9E-17 4.1E-22 94.8 8.9 80 2-81 178-298 (494)
44 KOG0514 Ankyrin repeat protein 99.7 1.8E-18 3.9E-23 94.3 4.2 76 4-80 339-415 (452)
45 PLN03192 Voltage-dependent pot 99.7 3.5E-17 7.6E-22 98.1 8.8 77 4-81 524-600 (823)
46 PHA02730 ankyrin-like protein; 99.7 4.6E-17 9.9E-22 95.2 8.7 80 1-81 37-123 (672)
47 KOG0508 Ankyrin repeat protein 99.7 4.9E-18 1.1E-22 95.2 4.2 75 6-81 118-192 (615)
48 KOG0510 Ankyrin repeat protein 99.7 4.1E-17 8.9E-22 95.8 7.5 80 1-81 269-350 (929)
49 KOG0508 Ankyrin repeat protein 99.7 8.6E-18 1.9E-22 94.3 4.2 78 2-81 147-224 (615)
50 TIGR00870 trp transient-recept 99.7 4.9E-17 1.1E-21 96.6 7.1 79 3-81 126-217 (743)
51 PHA02917 ankyrin-like protein; 99.7 2.3E-16 5E-21 92.8 9.1 79 2-81 393-494 (661)
52 PHA02917 ankyrin-like protein; 99.7 1.8E-16 4E-21 93.2 8.5 81 1-81 132-238 (661)
53 PHA02989 ankyrin repeat protei 99.7 2.5E-16 5.3E-21 90.3 8.9 80 2-81 105-190 (494)
54 PHA02798 ankyrin-like protein; 99.7 2.1E-16 4.5E-21 90.5 8.5 80 1-81 105-191 (489)
55 cd00204 ANK ankyrin repeats; 99.7 8.3E-16 1.8E-20 73.4 9.3 79 2-81 4-82 (126)
56 PHA02876 ankyrin repeat protei 99.7 3.4E-16 7.3E-21 92.4 9.0 77 3-80 339-416 (682)
57 KOG0510 Ankyrin repeat protein 99.7 1.5E-16 3.4E-21 93.5 7.3 80 2-81 222-315 (929)
58 PTZ00322 6-phosphofructo-2-kin 99.7 3.7E-16 8E-21 92.1 8.7 73 8-81 85-157 (664)
59 KOG0514 Ankyrin repeat protein 99.7 1.6E-16 3.5E-21 86.9 6.5 81 1-82 298-383 (452)
60 COG0666 Arp FOG: Ankyrin repea 99.7 1.6E-15 3.4E-20 78.6 8.1 81 1-81 102-189 (235)
61 KOG0512 Fetal globin-inducing 99.6 1.3E-15 2.8E-20 76.4 6.6 73 9-81 67-139 (228)
62 PF13857 Ank_5: Ankyrin repeat 99.6 5.3E-16 1.1E-20 65.6 4.3 45 1-46 12-56 (56)
63 KOG0195 Integrin-linked kinase 99.6 6.7E-16 1.5E-20 82.9 5.7 77 2-79 64-140 (448)
64 KOG1710 MYND Zn-finger and ank 99.6 2.9E-15 6.3E-20 80.2 7.5 80 1-80 41-120 (396)
65 PHA02795 ankyrin-like protein; 99.6 6E-15 1.3E-19 83.2 7.8 78 4-81 148-230 (437)
66 cd00204 ANK ankyrin repeats; 99.6 3E-14 6.5E-19 68.0 9.2 79 2-81 37-115 (126)
67 PTZ00322 6-phosphofructo-2-kin 99.6 6.5E-15 1.4E-19 86.9 8.1 78 1-79 111-195 (664)
68 PHA02792 ankyrin-like protein; 99.6 1E-14 2.2E-19 85.0 8.4 76 5-81 374-452 (631)
69 KOG0502 Integral membrane anky 99.6 1.5E-15 3.2E-20 78.7 4.2 78 3-81 191-268 (296)
70 PF13637 Ank_4: Ankyrin repeat 99.6 3.8E-15 8.2E-20 62.5 4.7 43 39-81 1-43 (54)
71 KOG4214 Myotrophin and similar 99.6 6E-15 1.3E-19 67.2 5.4 73 7-81 4-76 (117)
72 PHA02730 ankyrin-like protein; 99.6 1.4E-14 2.9E-19 85.1 8.3 79 2-81 414-505 (672)
73 PHA02736 Viral ankyrin protein 99.6 2E-14 4.4E-19 71.6 7.7 63 3-66 90-153 (154)
74 KOG0515 p53-interacting protei 99.6 3.8E-15 8.2E-20 84.9 5.5 65 2-67 580-644 (752)
75 KOG0507 CASK-interacting adapt 99.6 2.1E-15 4.7E-20 88.3 4.1 79 2-81 79-157 (854)
76 KOG4177 Ankyrin [Cell wall/mem 99.6 1E-14 2.2E-19 88.9 6.4 76 5-81 507-582 (1143)
77 KOG0783 Uncharacterized conser 99.5 3.9E-15 8.5E-20 88.4 3.4 80 1-81 48-128 (1267)
78 KOG0515 p53-interacting protei 99.5 2.9E-14 6.2E-19 81.4 6.3 72 9-81 554-625 (752)
79 KOG3676 Ca2+-permeable cation 99.5 4.9E-14 1.1E-18 83.0 7.1 78 3-80 182-281 (782)
80 KOG0505 Myosin phosphatase, re 99.5 2.8E-14 6.1E-19 80.9 4.8 77 4-81 197-273 (527)
81 KOG0505 Myosin phosphatase, re 99.5 2.5E-14 5.5E-19 81.0 4.6 78 2-80 70-147 (527)
82 COG0666 Arp FOG: Ankyrin repea 99.5 4.9E-13 1.1E-17 69.3 8.8 78 3-81 71-156 (235)
83 KOG0818 GTPase-activating prot 99.5 3.9E-13 8.4E-18 76.4 7.4 74 8-81 136-209 (669)
84 PHA02792 ankyrin-like protein; 99.5 1.9E-13 4.1E-18 79.9 5.7 80 2-81 102-224 (631)
85 KOG3676 Ca2+-permeable cation 99.5 3.9E-13 8.5E-18 79.3 7.0 77 4-81 239-317 (782)
86 TIGR00870 trp transient-recept 99.4 6.1E-13 1.3E-17 79.5 5.4 77 4-81 174-266 (743)
87 PF13606 Ank_3: Ankyrin repeat 99.3 3.6E-12 7.9E-17 47.3 3.7 26 5-30 2-27 (30)
88 PF00023 Ank: Ankyrin repeat H 99.3 5.2E-12 1.1E-16 47.9 4.0 31 39-69 2-32 (33)
89 PF13606 Ank_3: Ankyrin repeat 99.3 6.3E-12 1.4E-16 46.6 3.8 30 38-67 1-30 (30)
90 KOG0507 CASK-interacting adapt 99.3 2.2E-12 4.9E-17 76.1 3.2 80 2-82 46-125 (854)
91 KOG0506 Glutaminase (contains 99.2 1.1E-11 2.3E-16 70.4 3.6 76 4-80 505-581 (622)
92 PF00023 Ank: Ankyrin repeat H 99.2 6.7E-11 1.4E-15 44.8 4.3 29 4-32 1-29 (33)
93 KOG0705 GTPase-activating prot 99.2 1.4E-10 3.1E-15 67.2 5.8 63 2-65 658-720 (749)
94 KOG0782 Predicted diacylglycer 99.1 1.4E-10 2.9E-15 67.6 4.2 78 2-79 896-974 (1004)
95 KOG1710 MYND Zn-finger and ank 99.1 9.2E-10 2E-14 59.6 6.7 74 6-80 13-87 (396)
96 KOG0522 Ankyrin repeat protein 99.0 2.5E-09 5.4E-14 61.5 6.6 72 8-80 23-96 (560)
97 KOG4369 RTK signaling protein 99.0 1.8E-10 3.9E-15 71.4 1.6 79 2-80 787-865 (2131)
98 KOG0522 Ankyrin repeat protein 99.0 2.7E-09 5.8E-14 61.4 5.8 59 1-60 51-109 (560)
99 KOG0521 Putative GTPase activa 98.9 1.5E-09 3.3E-14 65.5 4.3 77 4-81 655-731 (785)
100 KOG0705 GTPase-activating prot 98.9 5.5E-09 1.2E-13 60.9 5.7 73 9-81 628-703 (749)
101 KOG0511 Ankyrin repeat protein 98.9 1.3E-08 2.7E-13 57.1 6.8 68 8-76 39-106 (516)
102 KOG2384 Major histocompatibili 98.8 7.1E-08 1.5E-12 49.6 6.1 65 2-67 9-74 (223)
103 KOG0818 GTPase-activating prot 98.8 4.2E-08 9.1E-13 56.6 5.8 57 3-60 165-221 (669)
104 KOG0506 Glutaminase (contains 98.7 1.7E-08 3.8E-13 57.8 2.9 61 1-61 535-595 (622)
105 KOG4369 RTK signaling protein 98.6 2.3E-08 5.1E-13 62.5 2.6 78 3-80 890-967 (2131)
106 KOG2505 Ankyrin repeat protein 98.3 2.2E-06 4.7E-11 49.8 4.4 63 18-80 404-471 (591)
107 KOG0520 Uncharacterized conser 98.2 9.6E-07 2.1E-11 54.5 2.1 75 4-80 573-649 (975)
108 KOG0783 Uncharacterized conser 98.1 9.6E-07 2.1E-11 54.1 1.4 63 19-81 32-95 (1267)
109 smart00248 ANK ankyrin repeats 98.1 1.2E-05 2.7E-10 28.1 3.7 25 5-29 2-26 (30)
110 smart00248 ANK ankyrin repeats 98.1 1.9E-05 4.2E-10 27.5 3.8 29 38-66 1-29 (30)
111 KOG2384 Major histocompatibili 98.0 1.4E-05 3.1E-10 41.4 4.3 48 34-81 7-55 (223)
112 KOG3609 Receptor-activated Ca2 98.0 1.8E-05 3.8E-10 48.5 5.0 63 8-70 91-162 (822)
113 KOG0782 Predicted diacylglycer 97.8 8E-05 1.7E-09 44.6 4.6 71 9-80 870-942 (1004)
114 KOG0520 Uncharacterized conser 97.7 2E-05 4.4E-10 49.0 1.9 76 2-79 605-687 (975)
115 KOG2505 Ankyrin repeat protein 97.7 0.00011 2.5E-09 43.0 4.1 45 3-48 428-472 (591)
116 KOG0521 Putative GTPase activa 97.6 6.9E-05 1.5E-09 46.3 3.0 45 37-81 654-698 (785)
117 KOG0511 Ankyrin repeat protein 97.1 0.00098 2.1E-08 38.3 3.6 41 40-80 37-77 (516)
118 KOG3609 Receptor-activated Ca2 94.3 0.092 2E-06 33.3 3.6 29 4-32 130-158 (822)
119 PF11929 DUF3447: Domain of un 94.0 0.25 5.3E-06 21.9 4.6 47 7-61 8-54 (76)
120 PF03158 DUF249: Multigene fam 92.8 0.63 1.4E-05 24.6 4.6 44 9-59 147-190 (192)
121 PF06128 Shigella_OspC: Shigel 89.4 2 4.4E-05 23.8 4.6 49 17-65 229-280 (284)
122 PF06128 Shigella_OspC: Shigel 85.3 4.7 0.0001 22.4 5.0 75 7-81 181-263 (284)
123 KOG1595 CCCH-type Zn-finger pr 71.1 0.51 1.1E-05 28.7 -1.6 70 4-73 57-127 (528)
124 KOG1709 Guanidinoacetate methy 59.6 12 0.00027 20.8 2.2 29 35-63 11-39 (271)
125 KOG4591 Uncharacterized conser 50.3 18 0.00039 19.9 1.9 43 38-80 221-268 (280)
126 KOG3836 HLH transcription fact 50.0 3.3 7.2E-05 26.0 -0.8 43 24-67 415-457 (605)
127 PF12645 HTH_16: Helix-turn-he 49.0 24 0.00053 15.3 2.8 20 8-27 2-21 (65)
128 cd08035 LARP_4 La RNA-binding 31.6 27 0.00059 15.8 0.8 15 1-15 27-41 (75)
129 KOG2237 Predicted serine prote 29.0 91 0.002 20.6 2.8 45 17-61 533-580 (712)
130 PRK12798 chemotaxis protein; R 28.2 1.5E+02 0.0033 18.4 3.6 27 36-62 81-107 (421)
131 cd08037 LARP_1 La RNA-binding 27.0 45 0.00098 15.0 1.0 14 2-15 28-41 (73)
132 KOG4335 FERM domain-containing 26.2 57 0.0012 20.6 1.6 44 34-77 172-216 (558)
133 PF08898 DUF1843: Domain of un 26.1 67 0.0015 13.5 2.8 21 8-28 6-26 (53)
134 cd08036 LARP_5 La RNA-binding 25.8 36 0.00079 15.4 0.6 16 1-16 27-42 (75)
135 cd00280 TRFH Telomeric Repeat 25.5 1.2E+02 0.0027 16.6 2.6 29 52-80 57-89 (200)
136 PF10683 DBD_Tnp_Hermes: Herme 24.8 7.9 0.00017 17.0 -1.5 23 42-64 30-52 (68)
137 cd08038 LARP_2 La RNA-binding 23.3 68 0.0015 14.4 1.2 14 2-15 28-41 (73)
138 cd08034 LARP_1_2 La RNA-bindin 21.0 80 0.0017 14.1 1.2 14 2-15 28-41 (73)
No 1
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=99.90 E-value=9.3e-24 Score=105.61 Aligned_cols=21 Identities=38% Similarity=0.325 Sum_probs=7.8
Q ss_pred CccHHHHHHhcCCHHHHHHHH
Q 035842 5 KNTTLHEAMCHGSVHVVEILS 25 (82)
Q Consensus 5 g~~~l~~a~~~~~~~~~~~ll 25 (82)
||||||+|+..|+.++++.|+
T Consensus 72 GWtPlhia~s~g~~evVk~Ll 92 (226)
T KOG4412|consen 72 GWTPLHIAASNGNDEVVKELL 92 (226)
T ss_pred CCchhhhhhhcCcHHHHHHHh
Confidence 333333333333333333333
No 2
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=99.89 E-value=2.8e-23 Score=103.92 Aligned_cols=77 Identities=29% Similarity=0.349 Sum_probs=73.6
Q ss_pred CCCCccHHHHHHhcCCHHHHHHHHHhCCCCccccccCCCcHHHHHHHhCCHHHHHHHHhcCcccccCCCCCccHhHHh
Q 035842 2 NNEKNTTLHEAMCHGSVHVVEILSRKDPDYPYSAKNYGKMPLYMAAEKGCLEMVDVLLSTYTFMSHGSPSGKTALHAA 79 (82)
Q Consensus 2 d~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a 79 (82)
+..|.|+||+|+.+|..++.++|+..|+.+. ..|.+|.||||-|+..|..+++++|+..|+.++.+|+.|+||||.|
T Consensus 103 tn~G~T~LHyAagK~r~eIaqlLle~ga~i~-~kD~~~qtplHRAAavGklkvie~Li~~~a~~n~qDk~G~TpL~~a 179 (226)
T KOG4412|consen 103 TNGGQTCLHYAAGKGRLEIAQLLLEKGALIR-IKDKQGQTPLHRAAAVGKLKVIEYLISQGAPLNTQDKYGFTPLHHA 179 (226)
T ss_pred cCCCcceehhhhcCChhhHHHHHHhcCCCCc-ccccccCchhHHHHhccchhhHHHHHhcCCCCCcccccCccHHHHH
Confidence 5679999999999999999999999998875 7899999999999999999999999999999999999999999998
No 3
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=99.87 E-value=7.7e-22 Score=112.28 Aligned_cols=75 Identities=32% Similarity=0.357 Sum_probs=36.6
Q ss_pred ccHHHHHHhcCCHHHHHHHHHhCCCCccccccCCCcHHHHHHHhCCHHHHHHHHhcCcccccCCCCCccHhHHhhh
Q 035842 6 NTTLHEAMCHGSVHVVEILSRKDPDYPYSAKNYGKMPLYMAAEKGCLEMVDVLLSTYTFMSHGSPSGKTALHAAAR 81 (82)
Q Consensus 6 ~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~ 81 (82)
.||||+|+++|+..++.+|+++|+++. ..|.+|.+++|+|++.++..++.+++..+++++.+|.+|+||||+|+.
T Consensus 113 stPLHWAar~G~~~vv~lLlqhGAdpt-~~D~~G~~~lHla~~~~~~~~vayll~~~~d~d~~D~~grTpLmwAay 187 (600)
T KOG0509|consen 113 STPLHWAARNGHISVVDLLLQHGADPT-LKDKQGLTPLHLAAQFGHTALVAYLLSKGADIDLRDNNGRTPLMWAAY 187 (600)
T ss_pred CCcchHHHHcCcHHHHHHHHHcCCCCc-eecCCCCcHHHHHHHhCchHHHHHHHHhcccCCCcCCCCCCHHHHHHH
Confidence 444555554454444444444444433 344445555555555555444444444444444455555555554443
No 4
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=99.87 E-value=7.1e-22 Score=112.43 Aligned_cols=80 Identities=30% Similarity=0.314 Sum_probs=75.5
Q ss_pred CCCCccHHHHHHhcCCHHHHHHHHHhCCCCccccccCCCcHHHHHHHhCCHHHHHHHHhcCcccccCCCCCccHhHHhhh
Q 035842 2 NNEKNTTLHEAMCHGSVHVVEILSRKDPDYPYSAKNYGKMPLYMAAEKGCLEMVDVLLSTYTFMSHGSPSGKTALHAAAR 81 (82)
Q Consensus 2 d~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~ 81 (82)
|++|.++||+|+.++..+++++|+++|++++......+.||||||+.+|+..++.+|++.|++++.+|.+|.+|+|+|++
T Consensus 75 D~~g~tlLHWAAiNNrl~v~r~li~~gadvn~~gG~l~stPLHWAar~G~~~vv~lLlqhGAdpt~~D~~G~~~lHla~~ 154 (600)
T KOG0509|consen 75 DREGVTLLHWAAINNRLDVARYLISHGADVNAIGGVLGSTPLHWAARNGHISVVDLLLQHGADPTLKDKQGLTPLHLAAQ 154 (600)
T ss_pred CcCCccceeHHHHcCcHHHHHHHHHcCCCccccCCCCCCCcchHHHHcCcHHHHHHHHHcCCCCceecCCCCcHHHHHHH
Confidence 67899999999999999999999999999875445789999999999999999999999999999999999999999986
No 5
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.86 E-value=8.8e-21 Score=102.43 Aligned_cols=80 Identities=24% Similarity=0.276 Sum_probs=69.4
Q ss_pred CCCCccHHHHHHhcCCHHHHHHHHHhCCCCccccccCCCcHHHHHHHhCCHHHHHHHHhcCcccccCCCCCccHhHHhhh
Q 035842 2 NNEKNTTLHEAMCHGSVHVVEILSRKDPDYPYSAKNYGKMPLYMAAEKGCLEMVDVLLSTYTFMSHGSPSGKTALHAAAR 81 (82)
Q Consensus 2 d~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~ 81 (82)
|..|.||||+|+..++.+++++|+++|++++...+..|.||||+|+..++.+++++|+..|++++.+|..|.||+++|++
T Consensus 67 d~~g~TpLh~Aa~~~~~eivklLL~~GADVN~~~~~~g~TpLh~Aa~~~~~eivklLL~~GAdin~kd~~G~TpL~~A~~ 146 (300)
T PHA02884 67 ENSKTNPLIYAIDCDNDDAAKLLIRYGADVNRYAEEAKITPLYISVLHGCLKCLEILLSYGADINIQTNDMVTPIELALM 146 (300)
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCcCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
Confidence 35789999999999999999999999998762234578999999999999999999999999999999999999999874
No 6
>PHA02741 hypothetical protein; Provisional
Probab=99.85 E-value=4.1e-20 Score=93.32 Aligned_cols=80 Identities=14% Similarity=0.155 Sum_probs=71.8
Q ss_pred CCCCCccHHHHHHhcCC----HHHHHHHHHhCCCCccccc-cCCCcHHHHHHHhCCHHHHHHHHh-cCcccccCCCCCcc
Q 035842 1 MNNEKNTTLHEAMCHGS----VHVVEILSRKDPDYPYSAK-NYGKMPLYMAAEKGCLEMVDVLLS-TYTFMSHGSPSGKT 74 (82)
Q Consensus 1 ~d~~g~~~l~~a~~~~~----~~~~~~ll~~~~~~~~~~~-~~~~t~l~~a~~~~~~~~~~~l~~-~~~~~~~~~~~~~t 74 (82)
+|..|+||||+|+..|+ .+++++|+..|++++ ..+ ..|.||||+|+..++.+++++|+. .|++++..|..|.|
T Consensus 56 ~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~gadin-~~~~~~g~TpLh~A~~~~~~~iv~~Ll~~~g~~~~~~n~~g~t 134 (169)
T PHA02741 56 TDDAGQMCIHIAAEKHEAQLAAEIIDHLIELGADIN-AQEMLEGDTALHLAAHRRDHDLAEWLCCQPGIDLHFCNADNKS 134 (169)
T ss_pred cCCCCCcHHHHHHHcCChHHHHHHHHHHHHcCCCCC-CCCcCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCC
Confidence 47789999999999998 588999999999876 555 489999999999999999999997 59999999999999
Q ss_pred HhHHhhh
Q 035842 75 ALHAAAR 81 (82)
Q Consensus 75 ~l~~a~~ 81 (82)
||++|..
T Consensus 135 pL~~A~~ 141 (169)
T PHA02741 135 PFELAID 141 (169)
T ss_pred HHHHHHH
Confidence 9999875
No 7
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.85 E-value=2.5e-20 Score=93.93 Aligned_cols=79 Identities=18% Similarity=0.155 Sum_probs=70.0
Q ss_pred CCCCccHHHHHHhcCCHH---HHHHHHHhCCCCccccc-cCCCcHHHHHHHhCCHHHHHHHHh-cCcccccCCCCCccHh
Q 035842 2 NNEKNTTLHEAMCHGSVH---VVEILSRKDPDYPYSAK-NYGKMPLYMAAEKGCLEMVDVLLS-TYTFMSHGSPSGKTAL 76 (82)
Q Consensus 2 d~~g~~~l~~a~~~~~~~---~~~~ll~~~~~~~~~~~-~~~~t~l~~a~~~~~~~~~~~l~~-~~~~~~~~~~~~~t~l 76 (82)
|..|+||||+|+..|..+ ++++|+..|++++ ..+ ..|.||||+|+..++.+++++|+. .|++++.++..|.|||
T Consensus 54 d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~Gadin-~~d~~~g~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~tpL 132 (166)
T PHA02743 54 DHHGRQCTHMVAWYDRANAVMKIELLVNMGADIN-ARELGTGNTLLHIAASTKNYELAEWLCRQLGVNLGAINYQHETAY 132 (166)
T ss_pred CCCCCcHHHHHHHhCccCHHHHHHHHHHcCCCCC-CCCCCCCCcHHHHHHHhCCHHHHHHHHhccCCCccCcCCCCCCHH
Confidence 678999999999998754 4789999999876 555 589999999999999999999995 7999999999999999
Q ss_pred HHhhh
Q 035842 77 HAAAR 81 (82)
Q Consensus 77 ~~a~~ 81 (82)
|+|+.
T Consensus 133 ~~A~~ 137 (166)
T PHA02743 133 HIAYK 137 (166)
T ss_pred HHHHH
Confidence 99975
No 8
>PHA02791 ankyrin-like protein; Provisional
Probab=99.84 E-value=3.2e-20 Score=99.90 Aligned_cols=77 Identities=23% Similarity=0.124 Sum_probs=51.8
Q ss_pred CCCCccHHHHHHhcCCHHHHHHHHHhCCCCccccccCCCcHHHHHHHhCCHHHHHHHHhcCcccccCCCCCccHhHHhhh
Q 035842 2 NNEKNTTLHEAMCHGSVHVVEILSRKDPDYPYSAKNYGKMPLYMAAEKGCLEMVDVLLSTYTFMSHGSPSGKTALHAAAR 81 (82)
Q Consensus 2 d~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~ 81 (82)
|.+|.||||+|+..|+.+++++|+..|++++ . ..+.||||+|+..++.+++++|+..|++++.+|..|.||||+|++
T Consensus 27 D~~G~TpLh~Aa~~g~~eiv~~Ll~~ga~~n-~--~d~~TpLh~Aa~~g~~eiV~lLL~~Gadvn~~d~~G~TpLh~Aa~ 103 (284)
T PHA02791 27 DVHGHSALYYAIADNNVRLVCTLLNAGALKN-L--LENEFPLHQAATLEDTKIVKILLFSGMDDSQFDDKGNTALYYAVD 103 (284)
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHCcCCCc-C--CCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
Confidence 5567777777777777777777777766543 2 235677777777777777777777677776666677777776664
No 9
>PHA02878 ankyrin repeat protein; Provisional
Probab=99.84 E-value=3e-20 Score=105.69 Aligned_cols=79 Identities=22% Similarity=0.230 Sum_probs=70.5
Q ss_pred CCC-CccHHHHHHhcCCHHHHHHHHHhCCCCccccccCCCcHHHHHHHhCCHHHHHHHHhcCcccccCCCCCccHhHHhh
Q 035842 2 NNE-KNTTLHEAMCHGSVHVVEILSRKDPDYPYSAKNYGKMPLYMAAEKGCLEMVDVLLSTYTFMSHGSPSGKTALHAAA 80 (82)
Q Consensus 2 d~~-g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~ 80 (82)
|.. |.||||+|+..|+.+++++|++.|++++ ..+..|.||||.|+..++.+++++|+..|++++.+|..|.||||+|+
T Consensus 164 ~~~~g~tpLh~A~~~~~~~iv~~Ll~~gad~n-~~d~~g~tpLh~A~~~~~~~iv~~Ll~~ga~in~~d~~g~TpLh~A~ 242 (477)
T PHA02878 164 DRHKGNTALHYATENKDQRLTELLLSYGANVN-IPDKTNNSPLHHAVKHYNKPIVHILLENGASTDARDKCGNTPLHISV 242 (477)
T ss_pred CCCCCCCHHHHHHhCCCHHHHHHHHHCCCCCC-CcCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH
Confidence 445 8999999999999999999999998865 67888999999999999999999999999999999999999999987
Q ss_pred h
Q 035842 81 R 81 (82)
Q Consensus 81 ~ 81 (82)
.
T Consensus 243 ~ 243 (477)
T PHA02878 243 G 243 (477)
T ss_pred H
Confidence 4
No 10
>PHA02875 ankyrin repeat protein; Provisional
Probab=99.84 E-value=4.2e-20 Score=103.50 Aligned_cols=79 Identities=19% Similarity=0.205 Sum_probs=64.1
Q ss_pred CCCCccHHHHHHhcCCHHHHHHHHHhCCCCccccccCCCcHHHHHHHhCCHHHHHHHHhcCcccccCCCCCccHhHHhhh
Q 035842 2 NNEKNTTLHEAMCHGSVHVVEILSRKDPDYPYSAKNYGKMPLYMAAEKGCLEMVDVLLSTYTFMSHGSPSGKTALHAAAR 81 (82)
Q Consensus 2 d~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~ 81 (82)
+..|.||||+|+..|+.+++++|++.|++++ ..+..|.||||+|+..++.+++++|++.|++++.+|..|.||||+|+.
T Consensus 99 ~~~g~tpL~~A~~~~~~~iv~~Ll~~gad~~-~~~~~g~tpLh~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~TpL~~A~~ 177 (413)
T PHA02875 99 YKDGMTPLHLATILKKLDIMKLLIARGADPD-IPNTDKFSPLHLAVMMGDIKGIELLIDHKACLDIEDCCGCTPLIIAMA 177 (413)
T ss_pred cCCCCCHHHHHHHhCCHHHHHHHHhCCCCCC-CCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHH
Confidence 3467888888888888888888888888764 567778888888888888888888888888888888888888888875
No 11
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=99.83 E-value=4.2e-20 Score=92.24 Aligned_cols=80 Identities=25% Similarity=0.251 Sum_probs=74.8
Q ss_pred CCCCCccHHHHHHhcCCHHHHHHHHHhCCCCccccccCCCcHHHHHHHhCCHHHHHHHHhcCcccccCCCCCccHhHHhh
Q 035842 1 MNNEKNTTLHEAMCHGSVHVVEILSRKDPDYPYSAKNYGKMPLYMAAEKGCLEMVDVLLSTYTFMSHGSPSGKTALHAAA 80 (82)
Q Consensus 1 ~d~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~ 80 (82)
.|.+|.||||-|+..|+.++++.|+..|++.. .....||||||.||.-...+++..|++.|+++++......||||+|+
T Consensus 93 rD~D~YTpLHRAaYn~h~div~~ll~~gAn~~-a~T~~GWTPLhSAckWnN~~va~~LLqhgaDVnA~t~g~ltpLhlaa 171 (228)
T KOG0512|consen 93 RDEDEYTPLHRAAYNGHLDIVHELLLSGANKE-AKTNEGWTPLHSACKWNNFEVAGRLLQHGADVNAQTKGLLTPLHLAA 171 (228)
T ss_pred cccccccHHHHHHhcCchHHHHHHHHccCCcc-cccccCccchhhhhcccchhHHHHHHhccCcccccccccchhhHHhh
Confidence 37889999999999999999999999999965 77889999999999999999999999999999999988999999998
Q ss_pred h
Q 035842 81 R 81 (82)
Q Consensus 81 ~ 81 (82)
.
T Consensus 172 ~ 172 (228)
T KOG0512|consen 172 G 172 (228)
T ss_pred c
Confidence 4
No 12
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.82 E-value=3.4e-20 Score=92.38 Aligned_cols=79 Identities=18% Similarity=0.135 Sum_probs=69.0
Q ss_pred CCCCccHHHHHHhcCCH---HHHHHHHHhCCCCccccc-cCCCcHHHHHHHhCCHHHHHHHHh-cCcccccCCCCCccHh
Q 035842 2 NNEKNTTLHEAMCHGSV---HVVEILSRKDPDYPYSAK-NYGKMPLYMAAEKGCLEMVDVLLS-TYTFMSHGSPSGKTAL 76 (82)
Q Consensus 2 d~~g~~~l~~a~~~~~~---~~~~~ll~~~~~~~~~~~-~~~~t~l~~a~~~~~~~~~~~l~~-~~~~~~~~~~~~~t~l 76 (82)
|..|.||||+|+..+.. +++++|+..|++++ ..+ ..|.||||+|+..++.+++++|+. .|++++.++..|.|||
T Consensus 52 d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~gadin-~~~~~~g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~n~~~~~g~tpL 130 (154)
T PHA02736 52 NRHGKQCVHIVSNPDKADPQEKLKLLMEWGADIN-GKERVFGNTPLHIAVYTQNYELATWLCNQPGVNMEILNYAFKTPY 130 (154)
T ss_pred cCCCCEEEEeecccCchhHHHHHHHHHHcCCCcc-ccCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCccccCCCCCHH
Confidence 56788888888888875 46788999999876 555 589999999999999999999998 5899999999999999
Q ss_pred HHhhh
Q 035842 77 HAAAR 81 (82)
Q Consensus 77 ~~a~~ 81 (82)
++|+.
T Consensus 131 ~~A~~ 135 (154)
T PHA02736 131 YVACE 135 (154)
T ss_pred HHHHH
Confidence 99985
No 13
>PHA02741 hypothetical protein; Provisional
Probab=99.82 E-value=1.5e-19 Score=91.33 Aligned_cols=80 Identities=28% Similarity=0.335 Sum_probs=69.1
Q ss_pred CCCCCccHHHHHHhcCCHHHHHHHHHh------CCCCccccccCCCcHHHHHHHhCC----HHHHHHHHhcCcccccCCC
Q 035842 1 MNNEKNTTLHEAMCHGSVHVVEILSRK------DPDYPYSAKNYGKMPLYMAAEKGC----LEMVDVLLSTYTFMSHGSP 70 (82)
Q Consensus 1 ~d~~g~~~l~~a~~~~~~~~~~~ll~~------~~~~~~~~~~~~~t~l~~a~~~~~----~~~~~~l~~~~~~~~~~~~ 70 (82)
.|..|.|+||+|+..|+.++++.|+.. +.+++ ..+..|.||||+|+..++ .+++++|+..|++++.++.
T Consensus 17 ~~~~g~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~in-~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~gadin~~~~ 95 (169)
T PHA02741 17 KNSEGENFFHEAARCGCFDIIARFTPFIRGDCHAAALN-ATDDAGQMCIHIAAEKHEAQLAAEIIDHLIELGADINAQEM 95 (169)
T ss_pred cccCCCCHHHHHHHcCCHHHHHHHHHHhccchhhhhhh-ccCCCCCcHHHHHHHcCChHHHHHHHHHHHHcCCCCCCCCc
Confidence 367899999999999999999987542 35543 678899999999999998 5889999999999999885
Q ss_pred -CCccHhHHhhh
Q 035842 71 -SGKTALHAAAR 81 (82)
Q Consensus 71 -~~~t~l~~a~~ 81 (82)
.|.||||+|++
T Consensus 96 ~~g~TpLh~A~~ 107 (169)
T PHA02741 96 LEGDTALHLAAH 107 (169)
T ss_pred CCCCCHHHHHHH
Confidence 89999999986
No 14
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.82 E-value=3.1e-19 Score=81.77 Aligned_cols=68 Identities=37% Similarity=0.497 Sum_probs=49.4
Q ss_pred HHHHHhcCCHHHHHHHHHhCCCCccccccCCCcHHHHHHHhCCHHHHHHHHhcCcccccCCCCCccHhHHhhh
Q 035842 9 LHEAMCHGSVHVVEILSRKDPDYPYSAKNYGKMPLYMAAEKGCLEMVDVLLSTYTFMSHGSPSGKTALHAAAR 81 (82)
Q Consensus 9 l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~ 81 (82)
||+|+..|+.+++++|++.+.+... |.+|+|+|+..|+.+++++|++.|++++.+|.+|.||||+|++
T Consensus 1 L~~A~~~~~~~~~~~ll~~~~~~~~-----~~~~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~ 68 (89)
T PF12796_consen 1 LHIAAQNGNLEILKFLLEKGADINL-----GNTALHYAAENGNLEIVKLLLENGADINSQDKNGNTALHYAAE 68 (89)
T ss_dssp HHHHHHTTTHHHHHHHHHTTSTTTS-----SSBHHHHHHHTTTHHHHHHHHHTTTCTT-BSTTSSBHHHHHHH
T ss_pred CHHHHHcCCHHHHHHHHHCcCCCCC-----CCCHHHHHHHcCCHHHHHHHHHhcccccccCCCCCCHHHHHHH
Confidence 5777777777777777776655431 6677777777777777777777777777777777777777765
No 15
>PHA02791 ankyrin-like protein; Provisional
Probab=99.82 E-value=2e-19 Score=96.81 Aligned_cols=77 Identities=23% Similarity=0.303 Sum_probs=54.8
Q ss_pred CCccHHHHHHhcCCHHHHHHHHHhCCCCccccccCCCcHHHHHHHhCCHHHHHHHHhcCcccccCCCCC-ccHhHHhhh
Q 035842 4 EKNTTLHEAMCHGSVHVVEILSRKDPDYPYSAKNYGKMPLYMAAEKGCLEMVDVLLSTYTFMSHGSPSG-KTALHAAAR 81 (82)
Q Consensus 4 ~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~-~t~l~~a~~ 81 (82)
+|.||||+|+..|+.+++++|+..|++++ ..+..|.||||+|+..++.+++++|+..|++++.++..| .||||+|++
T Consensus 60 d~~TpLh~Aa~~g~~eiV~lLL~~Gadvn-~~d~~G~TpLh~Aa~~g~~eivk~Ll~~gadin~~~~~g~~TpL~~Aa~ 137 (284)
T PHA02791 60 ENEFPLHQAATLEDTKIVKILLFSGMDDS-QFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVM 137 (284)
T ss_pred CCCCHHHHHHHCCCHHHHHHHHHCCCCCC-CCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccCCCCCcHHHHHHHH
Confidence 35677777777777777777777777654 566677777777777777777777777777777666665 367777654
No 16
>PHA02874 ankyrin repeat protein; Provisional
Probab=99.82 E-value=2.4e-19 Score=101.12 Aligned_cols=79 Identities=23% Similarity=0.397 Sum_probs=54.2
Q ss_pred CCCCccHHHHHHhcCCHHHHHHHHHhCCCCccccccCCCcHHHHHHHhCCHHHHHHHHhcCcccccCCCCCccHhHHhhh
Q 035842 2 NNEKNTTLHEAMCHGSVHVVEILSRKDPDYPYSAKNYGKMPLYMAAEKGCLEMVDVLLSTYTFMSHGSPSGKTALHAAAR 81 (82)
Q Consensus 2 d~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~ 81 (82)
|..|.||||+|+..|+.+++++|++.|++++ ..+..|.||||+|+..+..+++++|++.|++++..+..|.||||+|++
T Consensus 121 ~~~g~T~Lh~A~~~~~~~~v~~Ll~~gad~n-~~d~~g~tpLh~A~~~~~~~iv~~Ll~~g~~~n~~~~~g~tpL~~A~~ 199 (434)
T PHA02874 121 DAELKTFLHYAIKKGDLESIKMLFEYGADVN-IEDDNGCYPIHIAIKHNFFDIIKLLLEKGAYANVKDNNGESPLHNAAE 199 (434)
T ss_pred CCCCccHHHHHHHCCCHHHHHHHHhCCCCCC-CcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
Confidence 4456677777777777777777777766654 456667777777777777777777777777666666667777776664
No 17
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.82 E-value=4e-19 Score=92.33 Aligned_cols=78 Identities=15% Similarity=0.180 Sum_probs=53.4
Q ss_pred CCCCccHHHHHHhcC--CHHHHHHHHHhCCCCccccc-cCCCcHHHHHHHh---CCHHHHHHHHhcCcccccCCCCCccH
Q 035842 2 NNEKNTTLHEAMCHG--SVHVVEILSRKDPDYPYSAK-NYGKMPLYMAAEK---GCLEMVDVLLSTYTFMSHGSPSGKTA 75 (82)
Q Consensus 2 d~~g~~~l~~a~~~~--~~~~~~~ll~~~~~~~~~~~-~~~~t~l~~a~~~---~~~~~~~~l~~~~~~~~~~~~~~~t~ 75 (82)
|..|.||||+|+..+ +.+++++|++.|++++ ..+ ..|.||||+++.. +..+++++|++.|++++.+|..|.||
T Consensus 48 ~~~g~TpLh~a~~~~~~~~eiv~~Ll~~gadvn-~~~~~~g~TpLh~a~~~~~~~~~eiv~~Ll~~gadin~~d~~G~Tp 126 (209)
T PHA02859 48 NDLYETPIFSCLEKDKVNVEILKFLIENGADVN-FKTRDNNLSALHHYLSFNKNVEPEILKILIDSGSSITEEDEDGKNL 126 (209)
T ss_pred CccCCCHHHHHHHcCCCCHHHHHHHHHCCCCCC-ccCCCCCCCHHHHHHHhCccccHHHHHHHHHCCCCCCCcCCCCCCH
Confidence 556777777777643 6777777777777765 333 4677777776543 35677777777777777777777777
Q ss_pred hHHhh
Q 035842 76 LHAAA 80 (82)
Q Consensus 76 l~~a~ 80 (82)
||+|+
T Consensus 127 Lh~a~ 131 (209)
T PHA02859 127 LHMYM 131 (209)
T ss_pred HHHHH
Confidence 77664
No 18
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.82 E-value=5.8e-20 Score=98.12 Aligned_cols=78 Identities=29% Similarity=0.346 Sum_probs=73.2
Q ss_pred CCCCccHHHHHHhcCCHHHHHHHHHhCCCCccccccCCCcHHHHHHHhCCHHHHHHHHhcCcccccCCCCCccHhHHhh
Q 035842 2 NNEKNTTLHEAMCHGSVHVVEILSRKDPDYPYSAKNYGKMPLYMAAEKGCLEMVDVLLSTYTFMSHGSPSGKTALHAAA 80 (82)
Q Consensus 2 d~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~ 80 (82)
|..|.+|||+|+..|+..++++|+..|+.++ ..+.-..||||+|+..|+.+++..|+++.+++|..+..|.||||+||
T Consensus 31 ddhgfsplhwaakegh~aivemll~rgarvn-~tnmgddtplhlaaahghrdivqkll~~kadvnavnehgntplhyac 108 (448)
T KOG0195|consen 31 DDHGFSPLHWAAKEGHVAIVEMLLSRGARVN-STNMGDDTPLHLAAAHGHRDIVQKLLSRKADVNAVNEHGNTPLHYAC 108 (448)
T ss_pred cccCcchhhhhhhcccHHHHHHHHhcccccc-cccCCCCcchhhhhhcccHHHHHHHHHHhcccchhhccCCCchhhhh
Confidence 5679999999999999999999999999976 66777889999999999999999999999999999999999999998
No 19
>PHA03095 ankyrin-like protein; Provisional
Probab=99.81 E-value=3.8e-19 Score=100.85 Aligned_cols=80 Identities=24% Similarity=0.185 Sum_probs=71.7
Q ss_pred CCCCCccHHHHHHhcCCH--HHHHHHHHhCCCCccccccCCCcHHHHHHHhCCHHHHHHHHhcCcccccCCCCCccHhHH
Q 035842 1 MNNEKNTTLHEAMCHGSV--HVVEILSRKDPDYPYSAKNYGKMPLYMAAEKGCLEMVDVLLSTYTFMSHGSPSGKTALHA 78 (82)
Q Consensus 1 ~d~~g~~~l~~a~~~~~~--~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~ 78 (82)
.|..|+||||+|+..++. .+++.++..|.+++ ..+..|.||||+|+..|+.+++++|+..|++++.+|..|.|||++
T Consensus 218 ~d~~g~tpLh~Aa~~~~~~~~~v~~ll~~g~din-~~d~~g~TpLh~A~~~~~~~~v~~LL~~gad~n~~~~~g~tpl~~ 296 (471)
T PHA03095 218 TDMLGNTPLHSMATGSSCKRSLVLPLLIAGISIN-ARNRYGQTPLHYAAVFNNPRACRRLIALGADINAVSSDGNTPLSL 296 (471)
T ss_pred cCCCCCCHHHHHHhcCCchHHHHHHHHHcCCCCC-CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHH
Confidence 367899999999998864 56788889999876 678899999999999999999999999999999999999999999
Q ss_pred hhh
Q 035842 79 AAR 81 (82)
Q Consensus 79 a~~ 81 (82)
|++
T Consensus 297 A~~ 299 (471)
T PHA03095 297 MVR 299 (471)
T ss_pred HHH
Confidence 975
No 20
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.81 E-value=8.2e-19 Score=91.17 Aligned_cols=78 Identities=17% Similarity=0.198 Sum_probs=37.1
Q ss_pred CCCCccHHHHHHhc--CCHHHHHHHHHhCCCCccccccCCCcHHHH-HHHhCCHHHHHHHHhcCcccccCCCCCccHhHH
Q 035842 2 NNEKNTTLHEAMCH--GSVHVVEILSRKDPDYPYSAKNYGKMPLYM-AAEKGCLEMVDVLLSTYTFMSHGSPSGKTALHA 78 (82)
Q Consensus 2 d~~g~~~l~~a~~~--~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~-a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~ 78 (82)
|..|.||||+|+.. ++.+++++|++.|++++ ..+..|.||||. +...++.+++++|++.|++++.+|..|.|||++
T Consensus 120 d~~G~TpLh~a~~~~~~~~~iv~~Li~~gadin-~~d~~g~t~Lh~~a~~~~~~~iv~~Ll~~Gadi~~~d~~g~tpl~l 198 (209)
T PHA02859 120 DEDGKNLLHMYMCNFNVRINVIKLLIDSGVSFL-NKDFDNNNILYSYILFHSDKKIFDFLTSLGIDINETNKSGYNCYDL 198 (209)
T ss_pred CCCCCCHHHHHHHhccCCHHHHHHHHHcCCCcc-cccCCCCcHHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCHHHH
Confidence 34455555544432 34455555555554443 344445555553 233444455555555555555555555555555
Q ss_pred hh
Q 035842 79 AA 80 (82)
Q Consensus 79 a~ 80 (82)
|.
T Consensus 199 a~ 200 (209)
T PHA02859 199 IK 200 (209)
T ss_pred Hh
Confidence 44
No 21
>PHA02874 ankyrin repeat protein; Provisional
Probab=99.80 E-value=8.1e-19 Score=98.98 Aligned_cols=79 Identities=24% Similarity=0.307 Sum_probs=70.6
Q ss_pred CCCCccHHHHHHhcCCHHHHHHHHHhCCCCccccccCCCcHHHHHHHhCCHHHHHHHHhcCcccccCCCCCccHhHHhhh
Q 035842 2 NNEKNTTLHEAMCHGSVHVVEILSRKDPDYPYSAKNYGKMPLYMAAEKGCLEMVDVLLSTYTFMSHGSPSGKTALHAAAR 81 (82)
Q Consensus 2 d~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~ 81 (82)
|..|.||||+|+..++.+++++|++.|++.+ ..+..|.||||+|+..|+.+++++|++.|++++.++..|.||||.|+.
T Consensus 154 d~~g~tpLh~A~~~~~~~iv~~Ll~~g~~~n-~~~~~g~tpL~~A~~~g~~~iv~~Ll~~g~~i~~~~~~g~TpL~~A~~ 232 (434)
T PHA02874 154 DDNGCYPIHIAIKHNFFDIIKLLLEKGAYAN-VKDNNGESPLHNAAEYGDYACIKLLIDHGNHIMNKCKNGFTPLHNAII 232 (434)
T ss_pred CCCCCCHHHHHHHCCcHHHHHHHHHCCCCCC-CCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCcCCCCCCCCHHHHHHH
Confidence 6789999999999999999999999998865 678899999999999999999999999998888888888888888764
No 22
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=99.80 E-value=2.2e-19 Score=108.52 Aligned_cols=79 Identities=29% Similarity=0.398 Sum_probs=74.8
Q ss_pred CCCCccHHHHHHhcCCHHHHHHHHHhCCCCccccccCCCcHHHHHHHhCCHHHHHHHHhcCcccccCCCCCccHhHHhhh
Q 035842 2 NNEKNTTLHEAMCHGSVHVVEILSRKDPDYPYSAKNYGKMPLYMAAEKGCLEMVDVLLSTYTFMSHGSPSGKTALHAAAR 81 (82)
Q Consensus 2 d~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~ 81 (82)
+..|.||||.|+.+|+..++++|+++|+++. ..+..|+||||.|+..|+.+|+.+|+++|+++|..|.+|.|||++|.+
T Consensus 537 ~~r~~TpLh~A~~~g~v~~VkfLLe~gAdv~-ak~~~G~TPLH~Aa~~G~~~i~~LLlk~GA~vna~d~~g~TpL~iA~~ 615 (1143)
T KOG4177|consen 537 TGRGYTPLHVAVHYGNVDLVKFLLEHGADVN-AKDKLGYTPLHQAAQQGHNDIAELLLKHGASVNAADLDGFTPLHIAVR 615 (1143)
T ss_pred cccccchHHHHHhcCCchHHHHhhhCCcccc-ccCCCCCChhhHHHHcChHHHHHHHHHcCCCCCcccccCcchhHHHHH
Confidence 4568899999999999999999999999986 677999999999999999999999999999999999999999999986
No 23
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.80 E-value=1e-18 Score=104.50 Aligned_cols=79 Identities=23% Similarity=0.242 Sum_probs=62.1
Q ss_pred CCCCccHHHHHHhcCCHHHHHHHHHhCCCCccccccCCCcHHHHHHH-------------------------------hC
Q 035842 2 NNEKNTTLHEAMCHGSVHVVEILSRKDPDYPYSAKNYGKMPLYMAAE-------------------------------KG 50 (82)
Q Consensus 2 d~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~-------------------------------~~ 50 (82)
|..|+||||+|+..|+.++++.|++.|++++ ..+..|.||||+|+. .|
T Consensus 555 d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadin-~~d~~G~TpL~~A~~~g~~~iv~~L~~~~~~~~~~~~~~~L~~Aa~~g 633 (823)
T PLN03192 555 DSKGRTPLHIAASKGYEDCVLVLLKHACNVH-IRDANGNTALWNAISAKHHKIFRILYHFASISDPHAAGDLLCTAAKRN 633 (823)
T ss_pred CCCCCCHHHHHHHcChHHHHHHHHhcCCCCC-CcCCCCCCHHHHHHHhCCHHHHHHHHhcCcccCcccCchHHHHHHHhC
Confidence 6778888888888888888888888888865 667788888775544 44
Q ss_pred CHHHHHHHHhcCcccccCCCCCccHhHHhhh
Q 035842 51 CLEMVDVLLSTYTFMSHGSPSGKTALHAAAR 81 (82)
Q Consensus 51 ~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~ 81 (82)
+.++++.|++.|++++.+|..|.||||+|++
T Consensus 634 ~~~~v~~Ll~~Gadin~~d~~G~TpLh~A~~ 664 (823)
T PLN03192 634 DLTAMKELLKQGLNVDSEDHQGATALQVAMA 664 (823)
T ss_pred CHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
Confidence 4555666777888888888889999998875
No 24
>PHA02875 ankyrin repeat protein; Provisional
Probab=99.80 E-value=1.4e-18 Score=97.48 Aligned_cols=78 Identities=22% Similarity=0.176 Sum_probs=60.1
Q ss_pred CCccHHHHHHhcCCHHHHHHHHHhCCCCccccccCCCcHHHHHHHhCCHHHHHHHHhcCcccccCCCCCccHhHHhhh
Q 035842 4 EKNTTLHEAMCHGSVHVVEILSRKDPDYPYSAKNYGKMPLYMAAEKGCLEMVDVLLSTYTFMSHGSPSGKTALHAAAR 81 (82)
Q Consensus 4 ~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~ 81 (82)
.+.+|||.|+..|+.++++.|++.+.......+..|.||||+|+..++.+++++|+..|++++.++..|.||||+|++
T Consensus 67 ~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~~~~~iv~~Ll~~gad~~~~~~~g~tpLh~A~~ 144 (413)
T PHA02875 67 DIESELHDAVEEGDVKAVEELLDLGKFADDVFYKDGMTPLHLATILKKLDIMKLLIARGADPDIPNTDKFSPLHLAVM 144 (413)
T ss_pred CcccHHHHHHHCCCHHHHHHHHHcCCcccccccCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHH
Confidence 455566666666666666666655554433345678999999999999999999999999999999999999999985
No 25
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=99.80 E-value=1e-19 Score=93.83 Aligned_cols=79 Identities=25% Similarity=0.261 Sum_probs=71.2
Q ss_pred CCCCccHHHHHHhcCCHHHHHHHHHhCCCCccccccCCCcHHHHHHHhCCHHHHHHHHhcCcccccCCCCCccHhHHhhh
Q 035842 2 NNEKNTTLHEAMCHGSVHVVEILSRKDPDYPYSAKNYGKMPLYMAAEKGCLEMVDVLLSTYTFMSHGSPSGKTALHAAAR 81 (82)
Q Consensus 2 d~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~ 81 (82)
|+.|.|||++|+.+|+++++++|+..|++.. ...+...++|++|++.|..++++.|+.++.++|..|.+|-|||-+|++
T Consensus 157 De~GfTpLiWAaa~G~i~vV~fLL~~GAdp~-~lgk~resALsLAt~ggytdiV~lLL~r~vdVNvyDwNGgTpLlyAvr 235 (296)
T KOG0502|consen 157 DEFGFTPLIWAAAKGHIPVVQFLLNSGADPD-ALGKYRESALSLATRGGYTDIVELLLTREVDVNVYDWNGGTPLLYAVR 235 (296)
T ss_pred cccCchHhHHHHhcCchHHHHHHHHcCCChh-hhhhhhhhhHhHHhcCChHHHHHHHHhcCCCcceeccCCCceeeeeec
Confidence 7889999999999999999999999999864 566777789999999999999999999999999999999999988875
No 26
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.79 E-value=1.8e-18 Score=79.26 Aligned_cols=64 Identities=33% Similarity=0.420 Sum_probs=57.8
Q ss_pred CccHHHHHHhcCCHHHHHHHHHhCCCCccccccCCCcHHHHHHHhCCHHHHHHHHhcCcccccCC
Q 035842 5 KNTTLHEAMCHGSVHVVEILSRKDPDYPYSAKNYGKMPLYMAAEKGCLEMVDVLLSTYTFMSHGS 69 (82)
Q Consensus 5 g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~ 69 (82)
|.+|||+|+..|+.+++++|++.|++++ ..+..|+||||+|+..++.+++++|++.|++++.+|
T Consensus 26 ~~~~l~~A~~~~~~~~~~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~n 89 (89)
T PF12796_consen 26 GNTALHYAAENGNLEIVKLLLENGADIN-SQDKNGNTALHYAAENGNLEIVKLLLEHGADVNIRN 89 (89)
T ss_dssp SSBHHHHHHHTTTHHHHHHHHHTTTCTT--BSTTSSBHHHHHHHTTHHHHHHHHHHTTT-TTSS-
T ss_pred CCCHHHHHHHcCCHHHHHHHHHhccccc-ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcC
Confidence 6899999999999999999999999975 677899999999999999999999999999998765
No 27
>PHA02878 ankyrin repeat protein; Provisional
Probab=99.79 E-value=2.1e-18 Score=98.23 Aligned_cols=78 Identities=24% Similarity=0.319 Sum_probs=52.5
Q ss_pred CCCCccHHHHHHhcCCHHHHHHHHHhCCCCccccccCCCcHHHHHHHh-CCHHHHHHHHhcCcccccCCC-CCccHhHHh
Q 035842 2 NNEKNTTLHEAMCHGSVHVVEILSRKDPDYPYSAKNYGKMPLYMAAEK-GCLEMVDVLLSTYTFMSHGSP-SGKTALHAA 79 (82)
Q Consensus 2 d~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~-~~~~~~~~l~~~~~~~~~~~~-~~~t~l~~a 79 (82)
|..|.||||.|+..++.+++++|++.|++++ ..+..|.||||+|+.. ++.+++++|++.|++++.++. .|.||||+|
T Consensus 198 d~~g~tpLh~A~~~~~~~iv~~Ll~~ga~in-~~d~~g~TpLh~A~~~~~~~~iv~~Ll~~gadvn~~~~~~g~TpLh~A 276 (477)
T PHA02878 198 DKTNNSPLHHAVKHYNKPIVHILLENGASTD-ARDKCGNTPLHISVGYCKDYDILKLLLEHGVDVNAKSYILGLTALHSS 276 (477)
T ss_pred CCCCCCHHHHHHHhCCHHHHHHHHHcCCCCC-CCCCCCCCHHHHHHHhcCCHHHHHHHHHcCCCCCccCCCCCCCHHHHH
Confidence 4567777777777777777777777777654 5566777777777654 466777777777766666554 566666666
Q ss_pred h
Q 035842 80 A 80 (82)
Q Consensus 80 ~ 80 (82)
+
T Consensus 277 ~ 277 (477)
T PHA02878 277 I 277 (477)
T ss_pred c
Confidence 3
No 28
>PHA02946 ankyin-like protein; Provisional
Probab=99.79 E-value=2.3e-18 Score=97.53 Aligned_cols=79 Identities=20% Similarity=0.254 Sum_probs=60.8
Q ss_pred CCCCCccHHHHHHhcCCHHHHHHHHHhCCCCccccccCCCcHHHHHHHhCC--HHHHHHHHhcCccccc-CCCCCccHhH
Q 035842 1 MNNEKNTTLHEAMCHGSVHVVEILSRKDPDYPYSAKNYGKMPLYMAAEKGC--LEMVDVLLSTYTFMSH-GSPSGKTALH 77 (82)
Q Consensus 1 ~d~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~--~~~~~~l~~~~~~~~~-~~~~~~t~l~ 77 (82)
+|.+|+||||+|+..|+.+++++|+++|++++ ..+..|.||||+|+..+. .+++++|++.|++++. .+..|.|||+
T Consensus 68 ~d~~G~TpLh~Aa~~g~~eiv~lLL~~GAdin-~~d~~g~TpLh~A~~~~~~~~e~v~lLl~~Gadin~~~d~~g~tpL~ 146 (446)
T PHA02946 68 TDDDGNYPLHIASKINNNRIVAMLLTHGADPN-ACDKQHKTPLYYLSGTDDEVIERINLLVQYGAKINNSVDEEGCGPLL 146 (446)
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHCcCCCC-CCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCcccccCCCCCcHHH
Confidence 36678888888888888888888888888865 677888888888776553 6778888888888774 5667777776
Q ss_pred Hhh
Q 035842 78 AAA 80 (82)
Q Consensus 78 ~a~ 80 (82)
.|.
T Consensus 147 aa~ 149 (446)
T PHA02946 147 ACT 149 (446)
T ss_pred HHH
Confidence 443
No 29
>PHA03095 ankyrin-like protein; Provisional
Probab=99.79 E-value=1.9e-18 Score=97.99 Aligned_cols=78 Identities=19% Similarity=0.265 Sum_probs=58.2
Q ss_pred CCCCccHHHHHHhcC---CHHHHHHHHHhCCCCccccccCCCcHHHHHHHhC-CHHHHHHHHhcCcccccCCCCCccHhH
Q 035842 2 NNEKNTTLHEAMCHG---SVHVVEILSRKDPDYPYSAKNYGKMPLYMAAEKG-CLEMVDVLLSTYTFMSHGSPSGKTALH 77 (82)
Q Consensus 2 d~~g~~~l~~a~~~~---~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~-~~~~~~~l~~~~~~~~~~~~~~~t~l~ 77 (82)
|..|.||||+|+..+ +.+++++|++.|++++ ..+..|.||||+|+..+ ..+++++|++.|++++.++..|.||||
T Consensus 44 ~~~g~t~Lh~a~~~~~~~~~~iv~~Ll~~Gadin-~~~~~g~TpLh~A~~~~~~~~iv~lLl~~ga~in~~~~~g~tpLh 122 (471)
T PHA03095 44 GEYGKTPLHLYLHYSSEKVKDIVRLLLEAGADVN-APERCGFTPLHLYLYNATTLDVIKLLIKAGADVNAKDKVGRTPLH 122 (471)
T ss_pred CCCCCCHHHHHHHhcCCChHHHHHHHHHCCCCCC-CCCCCCCCHHHHHHHcCCcHHHHHHHHHcCCCCCCCCCCCCCHHH
Confidence 456777777777777 7777777777777765 55667777777777777 477777777777777777777777777
Q ss_pred Hhh
Q 035842 78 AAA 80 (82)
Q Consensus 78 ~a~ 80 (82)
+|+
T Consensus 123 ~a~ 125 (471)
T PHA03095 123 VYL 125 (471)
T ss_pred HHh
Confidence 776
No 30
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.78 E-value=4.5e-18 Score=92.06 Aligned_cols=80 Identities=13% Similarity=0.066 Sum_probs=67.9
Q ss_pred CCCCCccH-HHHHHhcCCHHHHHHHHHhCCCCcccc----ccCCCcHHHHHHHhCCHHHHHHHHhcCcccccC-CCCCcc
Q 035842 1 MNNEKNTT-LHEAMCHGSVHVVEILSRKDPDYPYSA----KNYGKMPLYMAAEKGCLEMVDVLLSTYTFMSHG-SPSGKT 74 (82)
Q Consensus 1 ~d~~g~~~-l~~a~~~~~~~~~~~ll~~~~~~~~~~----~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~-~~~~~t 74 (82)
+|..|+++ |+.|+..++.+++++|++.|++++ .. +..|.||||+|+..++.+++++|++.|++++.+ +..|.|
T Consensus 28 ~d~~~~~~lL~~A~~~~~~eivk~LL~~GAdiN-~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~GADVN~~~~~~g~T 106 (300)
T PHA02884 28 KNKICIANILYSSIKFHYTDIIDAILKLGADPE-APFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGADVNRYAEEAKIT 106 (300)
T ss_pred cCcCCCCHHHHHHHHcCCHHHHHHHHHCCCCcc-ccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcCcccCCCCCC
Confidence 36677775 555566689999999999999976 33 458999999999999999999999999999986 467999
Q ss_pred HhHHhhh
Q 035842 75 ALHAAAR 81 (82)
Q Consensus 75 ~l~~a~~ 81 (82)
|||+|+.
T Consensus 107 pLh~Aa~ 113 (300)
T PHA02884 107 PLYISVL 113 (300)
T ss_pred HHHHHHH
Confidence 9999974
No 31
>PHA02795 ankyrin-like protein; Provisional
Probab=99.78 E-value=2e-18 Score=96.88 Aligned_cols=76 Identities=18% Similarity=0.122 Sum_probs=70.2
Q ss_pred CccHHHHHHhcCCHHHHHHHHHhCCCCccccccCCCcHHHHHHHhCCHHHHHHHHhcCcccccCCCCCccHhHHhhh
Q 035842 5 KNTTLHEAMCHGSVHVVEILSRKDPDYPYSAKNYGKMPLYMAAEKGCLEMVDVLLSTYTFMSHGSPSGKTALHAAAR 81 (82)
Q Consensus 5 g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~ 81 (82)
+.+++|.++..++.+++++|+.+|++++ ..+..|.||||+|+..|+.+++++|++.|++++.++..|.||||+|+.
T Consensus 188 ~~t~l~~a~~~~~~eIve~LIs~GADIN-~kD~~G~TpLh~Aa~~g~~eiVelLL~~GAdIN~~d~~G~TpLh~Aa~ 263 (437)
T PHA02795 188 QYTRGFLVDEPTVLEIYKLCIPYIEDIN-QLDAGGRTLLYRAIYAGYIDLVSWLLENGANVNAVMSNGYTCLDVAVD 263 (437)
T ss_pred ccchhHHHHhcCHHHHHHHHHhCcCCcC-cCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHH
Confidence 5678888888888999999999999876 778899999999999999999999999999999999999999999985
No 32
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.78 E-value=5.2e-19 Score=74.83 Aligned_cols=55 Identities=33% Similarity=0.401 Sum_probs=32.1
Q ss_pred HHHhC-CCCccccccCCCcHHHHHHHhCCHHHHHHHHhcCcccccCCCCCccHhHHh
Q 035842 24 LSRKD-PDYPYSAKNYGKMPLYMAAEKGCLEMVDVLLSTYTFMSHGSPSGKTALHAA 79 (82)
Q Consensus 24 ll~~~-~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a 79 (82)
|++.+ .++ +..+..|.||||+|+..|+.+++++|+..|++++.+|..|+||+++|
T Consensus 1 LL~~~~~~~-n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~~~~d~~G~Tpl~~A 56 (56)
T PF13857_consen 1 LLEHGPADV-NAQDKYGNTPLHWAARYGHSEVVRLLLQNGADPNAKDKDGQTPLHYA 56 (56)
T ss_dssp -----T--T-T---TTS--HHHHHHHHT-HHHHHHHHHCT--TT---TTS--HHHH-
T ss_pred CCccCcCCC-cCcCCCCCcHHHHHHHcCcHHHHHHHHHCcCCCCCCcCCCCCHHHhC
Confidence 45666 444 47889999999999999999999999999999999999999999987
No 33
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.78 E-value=2.9e-18 Score=72.07 Aligned_cols=54 Identities=31% Similarity=0.509 Sum_probs=45.2
Q ss_pred CccHHHHHHhcCCHHHHHHHHHhCCCCccccccCCCcHHHHHHHhCCHHHHHHHH
Q 035842 5 KNTTLHEAMCHGSVHVVEILSRKDPDYPYSAKNYGKMPLYMAAEKGCLEMVDVLL 59 (82)
Q Consensus 5 g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~ 59 (82)
|+|+||+|+..|+.+++++|++.+.+++ ..|..|.||+|+|+..|+.+++++|+
T Consensus 1 g~t~lh~A~~~g~~~~~~~Ll~~~~din-~~d~~g~t~lh~A~~~g~~~~~~~Ll 54 (54)
T PF13637_consen 1 GRTPLHWAARSGNLEIVKLLLEHGADIN-AQDEDGRTPLHYAAKNGNIDIVKFLL 54 (54)
T ss_dssp SSBHHHHHHHTT-HHHHHHHHHTTSGTT--B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred CChHHHHHHHhCCHHHHHHHHHCCCCCC-CCCCCCCCHHHHHHHccCHHHHHHHC
Confidence 7899999999999999999999999976 67999999999999999999999985
No 34
>PHA03100 ankyrin repeat protein; Provisional
Probab=99.78 E-value=2.7e-18 Score=97.62 Aligned_cols=79 Identities=23% Similarity=0.223 Sum_probs=61.6
Q ss_pred CCCCccHHHHHH--hcCCHHHHHHHHHhCCCCccccccCCCcHHHHHHHhC--CHHHHHHHHhcCcccccCCCCCccHhH
Q 035842 2 NNEKNTTLHEAM--CHGSVHVVEILSRKDPDYPYSAKNYGKMPLYMAAEKG--CLEMVDVLLSTYTFMSHGSPSGKTALH 77 (82)
Q Consensus 2 d~~g~~~l~~a~--~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~--~~~~~~~l~~~~~~~~~~~~~~~t~l~ 77 (82)
|..|.||||+|+ ..|+.+++++|++.|+++. ..+..|.||||+|+..+ +.+++++|++.|++++.++..|.||||
T Consensus 103 d~~g~tpL~~A~~~~~~~~~iv~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~~iv~~Ll~~g~din~~d~~g~tpL~ 181 (480)
T PHA03100 103 DNNGITPLLYAISKKSNSYSIVEYLLDNGANVN-IKNSDGENLLHLYLESNKIDLKILKLLIDKGVDINAKNRYGYTPLH 181 (480)
T ss_pred CCCCCchhhHHHhcccChHHHHHHHHHcCCCCC-ccCCCCCcHHHHHHHcCCChHHHHHHHHHCCCCcccccCCCCCHHH
Confidence 456778888888 7788888888888877754 56677888888888888 778888888888888777778888888
Q ss_pred Hhhh
Q 035842 78 AAAR 81 (82)
Q Consensus 78 ~a~~ 81 (82)
+|++
T Consensus 182 ~A~~ 185 (480)
T PHA03100 182 IAVE 185 (480)
T ss_pred HHHH
Confidence 8765
No 35
>PHA02946 ankyin-like protein; Provisional
Probab=99.76 E-value=6.7e-18 Score=95.68 Aligned_cols=78 Identities=13% Similarity=0.250 Sum_probs=59.7
Q ss_pred CCCCccHHHHHHhcCC--HHHHHHHHHhCCCCccccccCCCcHHHHHHHhC--CHHHHHHHHhcCcccccCCCCCccHhH
Q 035842 2 NNEKNTTLHEAMCHGS--VHVVEILSRKDPDYPYSAKNYGKMPLYMAAEKG--CLEMVDVLLSTYTFMSHGSPSGKTALH 77 (82)
Q Consensus 2 d~~g~~~l~~a~~~~~--~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~--~~~~~~~l~~~~~~~~~~~~~~~t~l~ 77 (82)
|..|+||||.|+..++ .+++++|++.|++++ ..+..|.||||+|+..+ +.+++++|+. |++++.+|..|.||||
T Consensus 170 d~~G~t~Lh~A~~~~~~~~~~v~~Ll~~Gadin-~~d~~G~TpLH~Aa~~~~~~~~iv~lLl~-gadin~~d~~G~TpLh 247 (446)
T PHA02946 170 DKFGKNHIHRHLMSDNPKASTISWMMKLGISPS-KPDHDGNTPLHIVCSKTVKNVDIINLLLP-STDVNKQNKFGDSPLT 247 (446)
T ss_pred CCCCCCHHHHHHHhcCCCHHHHHHHHHcCCCCc-ccCCCCCCHHHHHHHcCCCcHHHHHHHHc-CCCCCCCCCCCCCHHH
Confidence 5678888887776543 577888888888765 66778888888888775 6677777774 7888888888888888
Q ss_pred Hhhh
Q 035842 78 AAAR 81 (82)
Q Consensus 78 ~a~~ 81 (82)
+|++
T Consensus 248 ~A~~ 251 (446)
T PHA02946 248 LLIK 251 (446)
T ss_pred HHHH
Confidence 8775
No 36
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=99.76 E-value=5.4e-18 Score=77.03 Aligned_cols=75 Identities=25% Similarity=0.339 Sum_probs=68.2
Q ss_pred CCccHHHHHHhcCCHHHHHHHHHhCCCCccccccCCCcHHHHHHHhCCHHHHHHHHhcCcccccCCCCCccHhHHh
Q 035842 4 EKNTTLHEAMCHGSVHVVEILSRKDPDYPYSAKNYGKMPLYMAAEKGCLEMVDVLLSTYTFMSHGSPSGKTALHAA 79 (82)
Q Consensus 4 ~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a 79 (82)
.|++|||+|+-.|..+++++|+.-|+++. ..|..|.|||..|.-.|+.+|+++|++.|++...+..+|.+.+..+
T Consensus 33 ggR~plhyAAD~GQl~ilefli~iGA~i~-~kDKygITPLLsAvwEGH~~cVklLL~~GAdrt~~~PdG~~~~eat 107 (117)
T KOG4214|consen 33 GGRTPLHYAADYGQLSILEFLISIGANIQ-DKDKYGITPLLSAVWEGHRDCVKLLLQNGADRTIHAPDGTALIEAT 107 (117)
T ss_pred CCcccchHhhhcchHHHHHHHHHhccccC-CccccCCcHHHHHHHHhhHHHHHHHHHcCcccceeCCCchhHHhhc
Confidence 58999999999999999999999999986 7899999999999999999999999999999988888887776544
No 37
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=99.76 E-value=1e-17 Score=99.07 Aligned_cols=78 Identities=13% Similarity=0.104 Sum_probs=69.7
Q ss_pred CCCCccHHHHHHhc--CCHHHHHHHHHhCCCCccccccCCCcHHHHHHHhCC--HHHHHHHHhcCcccccCCCCCccHhH
Q 035842 2 NNEKNTTLHEAMCH--GSVHVVEILSRKDPDYPYSAKNYGKMPLYMAAEKGC--LEMVDVLLSTYTFMSHGSPSGKTALH 77 (82)
Q Consensus 2 d~~g~~~l~~a~~~--~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~--~~~~~~l~~~~~~~~~~~~~~~t~l~ 77 (82)
|..|.||||+|+.. ++.+++++|++.|++++ ..+..|.||||+|+..++ .+++++|++.|++++.+|..|.||||
T Consensus 174 d~~G~TpLH~A~~n~~~~~eIVklLLe~GADVN-~kD~~G~TPLH~Aa~~g~~~~eIVklLLe~GADVN~kD~~G~TPLh 252 (764)
T PHA02716 174 KKTGYGILHAYLGNMYVDIDILEWLCNNGVNVN-LQNNHLITPLHTYLITGNVCASVIKKIIELGGDMDMKCVNGMSPIM 252 (764)
T ss_pred CCCCCcHHHHHHHhccCCHHHHHHHHHcCCCCC-CCCCCCCCHHHHHHHcCCCCHHHHHHHHHcCCCCCCCCCCCCCHHH
Confidence 56799999988643 57899999999999976 678899999999999995 48999999999999999999999999
Q ss_pred Hhh
Q 035842 78 AAA 80 (82)
Q Consensus 78 ~a~ 80 (82)
+|+
T Consensus 253 ~Ai 255 (764)
T PHA02716 253 TYI 255 (764)
T ss_pred HHH
Confidence 874
No 38
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.76 E-value=1e-17 Score=84.48 Aligned_cols=79 Identities=18% Similarity=0.195 Sum_probs=66.3
Q ss_pred CCCCccHHHHHHhcCCH----HHHHHHHHhCCCCccccccCCCcHHHHHHHhCCHH---HHHHHHhcCcccccCC-CCCc
Q 035842 2 NNEKNTTLHEAMCHGSV----HVVEILSRKDPDYPYSAKNYGKMPLYMAAEKGCLE---MVDVLLSTYTFMSHGS-PSGK 73 (82)
Q Consensus 2 d~~g~~~l~~a~~~~~~----~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~---~~~~l~~~~~~~~~~~-~~~~ 73 (82)
+.++.+++|.|+..|+. +++++|+..+..++ ..+..|+||||+|+..+..+ ++++|++.|++++.++ ..|.
T Consensus 17 ~~~~~~~l~~a~~~g~~~~l~~~~~~l~~~g~~~~-~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~Gadin~~d~~~g~ 95 (166)
T PHA02743 17 DEDEQNTFLRICRTGNIYELMEVAPFISGDGHLLH-RYDHHGRQCTHMVAWYDRANAVMKIELLVNMGADINARELGTGN 95 (166)
T ss_pred ccCCCcHHHHHHHcCCHHHHHHHHHHHhhcchhhh-ccCCCCCcHHHHHHHhCccCHHHHHHHHHHcCCCCCCCCCCCCC
Confidence 45678899999999997 55566777777654 67889999999999998865 4799999999999998 5899
Q ss_pred cHhHHhhh
Q 035842 74 TALHAAAR 81 (82)
Q Consensus 74 t~l~~a~~ 81 (82)
||||+|++
T Consensus 96 TpLh~A~~ 103 (166)
T PHA02743 96 TLLHIAAS 103 (166)
T ss_pred cHHHHHHH
Confidence 99999985
No 39
>PHA02798 ankyrin-like protein; Provisional
Probab=99.75 E-value=8.9e-18 Score=95.99 Aligned_cols=79 Identities=23% Similarity=0.307 Sum_probs=58.3
Q ss_pred CCCCccHHHHHHhc-----CCHHHHHHHHHhCCCCccccccCCCcHHHHHHHhC---CHHHHHHHHhcCcccccCCCCCc
Q 035842 2 NNEKNTTLHEAMCH-----GSVHVVEILSRKDPDYPYSAKNYGKMPLYMAAEKG---CLEMVDVLLSTYTFMSHGSPSGK 73 (82)
Q Consensus 2 d~~g~~~l~~a~~~-----~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~---~~~~~~~l~~~~~~~~~~~~~~~ 73 (82)
|..|.||||.++.. +..+++++|++.|++++ ..+..|.||||+|+..+ +.+++++|++.|++++.+|..|.
T Consensus 68 d~~g~TpL~~~~~n~~~~~~~~~iv~~Ll~~GadiN-~~d~~G~TpLh~a~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~ 146 (489)
T PHA02798 68 DNEYSTPLCTILSNIKDYKHMLDIVKILIENGADIN-KKNSDGETPLYCLLSNGYINNLEILLFMIENGADTTLLDKDGF 146 (489)
T ss_pred CCCCCChHHHHHHhHHhHHhHHHHHHHHHHCCCCCC-CCCCCcCcHHHHHHHcCCcChHHHHHHHHHcCCCccccCCCCC
Confidence 56777888777643 45677788888887765 56777888888877754 56778888888888887888888
Q ss_pred cHhHHhhh
Q 035842 74 TALHAAAR 81 (82)
Q Consensus 74 t~l~~a~~ 81 (82)
||||+|++
T Consensus 147 tpL~~a~~ 154 (489)
T PHA02798 147 TMLQVYLQ 154 (489)
T ss_pred cHHHHHHH
Confidence 88887764
No 40
>PHA02876 ankyrin repeat protein; Provisional
Probab=99.75 E-value=1.4e-17 Score=98.15 Aligned_cols=78 Identities=18% Similarity=0.110 Sum_probs=47.4
Q ss_pred CCCCccHHHHHHhcCCHHHHHHHHHhCCCCccccccCCCcHHHHHHHhCC-HHHHHHHHhcCcccccCCCCCccHhHHhh
Q 035842 2 NNEKNTTLHEAMCHGSVHVVEILSRKDPDYPYSAKNYGKMPLYMAAEKGC-LEMVDVLLSTYTFMSHGSPSGKTALHAAA 80 (82)
Q Consensus 2 d~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~-~~~~~~l~~~~~~~~~~~~~~~t~l~~a~ 80 (82)
|..|.||||+|+..|+.+++++|++.|+++. ..+..|.||||+|+..+. ..++++|+..|++++.+|..|.||||+|+
T Consensus 372 d~~G~TpLh~Aa~~~~~~iv~~Ll~~gad~~-~~~~~g~T~Lh~A~~~~~~~~~vk~Ll~~gadin~~d~~G~TpLh~Aa 450 (682)
T PHA02876 372 DYCDKTPIHYAAVRNNVVIINTLLDYGADIE-ALSQKIGTALHFALCGTNPYMSVKTLIDRGANVNSKNKDLSTPLHYAC 450 (682)
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHCCCCcc-ccCCCCCchHHHHHHcCCHHHHHHHHHhCCCCCCcCCCCCChHHHHHH
Confidence 5567777777777777777777777666643 344455555555554433 23455555555555555556666666555
No 41
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=99.75 E-value=1.6e-17 Score=98.31 Aligned_cols=78 Identities=22% Similarity=0.224 Sum_probs=60.5
Q ss_pred CCCCccHHHHHHhcCC--HHHHHHHHHhCCCCccccccCCCcHHHHH---------------------------------
Q 035842 2 NNEKNTTLHEAMCHGS--VHVVEILSRKDPDYPYSAKNYGKMPLYMA--------------------------------- 46 (82)
Q Consensus 2 d~~g~~~l~~a~~~~~--~~~~~~ll~~~~~~~~~~~~~~~t~l~~a--------------------------------- 46 (82)
|..|.||||+|+..|+ .+++++|++.|++++ ..+..|.||||+|
T Consensus 209 D~~G~TPLH~Aa~~g~~~~eIVklLLe~GADVN-~kD~~G~TPLh~Ai~~a~n~~~EIvkiLie~~d~n~~~~~~~~L~~ 287 (764)
T PHA02716 209 NNHLITPLHTYLITGNVCASVIKKIIELGGDMD-MKCVNGMSPIMTYIINIDNINPEITNIYIESLDGNKVKNIPMILHS 287 (764)
T ss_pred CCCCCCHHHHHHHcCCCCHHHHHHHHHcCCCCC-CCCCCCCCHHHHHHHhhhccCHHHHHHHHHhccccccccchhhhHH
Confidence 5678888888888874 478888888888865 6677888888764
Q ss_pred ----HHhCCHHHHHHHHhcCcccccCCCCCccHhHHhh
Q 035842 47 ----AEKGCLEMVDVLLSTYTFMSHGSPSGKTALHAAA 80 (82)
Q Consensus 47 ----~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~ 80 (82)
+..|+.+++++|++.|++++.+|..|+||||+|+
T Consensus 288 ~i~AA~~g~leiVklLLe~GAdIN~kD~~G~TPLH~Aa 325 (764)
T PHA02716 288 YITLARNIDISVVYSFLQPGVKLHYKDSAGRTCLHQYI 325 (764)
T ss_pred HHHHHHcCCHHHHHHHHhCCCceeccCCCCCCHHHHHH
Confidence 2346677788888888888888888888888764
No 42
>PHA03100 ankyrin repeat protein; Provisional
Probab=99.75 E-value=1.9e-17 Score=94.18 Aligned_cols=75 Identities=29% Similarity=0.263 Sum_probs=70.8
Q ss_pred ccHHHHHHhcCC--HHHHHHHHHhCCCCccccccCCCcHHHHHHHhCCHHHHHHHHhcCcccccCCCCCccHhHHhhh
Q 035842 6 NTTLHEAMCHGS--VHVVEILSRKDPDYPYSAKNYGKMPLYMAAEKGCLEMVDVLLSTYTFMSHGSPSGKTALHAAAR 81 (82)
Q Consensus 6 ~~~l~~a~~~~~--~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~ 81 (82)
.+|||.|+..++ .+++++|++.|.+++ ..+..|.||||+|+..++.+++++|+..|++++.+|..|.||+++|++
T Consensus 216 ~t~l~~a~~~~~~~~~iv~~Ll~~g~din-~~d~~g~TpL~~A~~~~~~~iv~~Ll~~gad~n~~d~~g~tpl~~A~~ 292 (480)
T PHA03100 216 ETPLHIAACYNEITLEVVNYLLSYGVPIN-IKDVYGFTPLHYAVYNNNPEFVKYLLDLGANPNLVNKYGDTPLHIAIL 292 (480)
T ss_pred HhHHHHHHHhCcCcHHHHHHHHHcCCCCC-CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHH
Confidence 789999999999 999999999999875 678999999999999999999999999999999999999999999985
No 43
>PHA02989 ankyrin repeat protein; Provisional
Probab=99.75 E-value=1.9e-17 Score=94.77 Aligned_cols=80 Identities=21% Similarity=0.198 Sum_probs=65.7
Q ss_pred CCCCccHHHHHHhcC----CHHHHHHHHHhCCCCcc-------------------------------------ccccCCC
Q 035842 2 NNEKNTTLHEAMCHG----SVHVVEILSRKDPDYPY-------------------------------------SAKNYGK 40 (82)
Q Consensus 2 d~~g~~~l~~a~~~~----~~~~~~~ll~~~~~~~~-------------------------------------~~~~~~~ 40 (82)
|..|.||||+++..+ +.+++++|++.|++++. ..+..|.
T Consensus 178 ~~~g~tpL~~a~~~~~~~~~~~iv~~Ll~~Ga~vn~~~~~~~t~l~~~~~~~~~~~~~~~~il~~l~~~advn~~d~~G~ 257 (494)
T PHA02989 178 SLYGLTPMNIYLRNDIDVISIKVIKYLIKKGVNIETNNNGSESVLESFLDNNKILSKKEFKVLNFILKYIKINKKDKKGF 257 (494)
T ss_pred cccCCChHHHHHhcccccccHHHHHHHHhCCCCccccCCccccHHHHHHHhchhhcccchHHHHHHHhCCCCCCCCCCCC
Confidence 346778888776553 67888888888776431 2345699
Q ss_pred cHHHHHHHhCCHHHHHHHHhcCcccccCCCCCccHhHHhhh
Q 035842 41 MPLYMAAEKGCLEMVDVLLSTYTFMSHGSPSGKTALHAAAR 81 (82)
Q Consensus 41 t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~ 81 (82)
||||+|+..++.+++++|++.|++++.+|..|.||||+|++
T Consensus 258 TpL~~Aa~~~~~~~v~~LL~~Gadin~~d~~G~TpL~~A~~ 298 (494)
T PHA02989 258 NPLLISAKVDNYEAFNYLLKLGDDIYNVSKDGDTVLTYAIK 298 (494)
T ss_pred CHHHHHHHhcCHHHHHHHHHcCCCccccCCCCCCHHHHHHH
Confidence 99999999999999999999999999999999999999986
No 44
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.75 E-value=1.8e-18 Score=94.33 Aligned_cols=76 Identities=33% Similarity=0.354 Sum_probs=50.6
Q ss_pred CCccHHHHHHhcCCHHHHHHHHHhCCCCccccccCCCcHHHHHHHhCCHHHHHHHHh-cCcccccCCCCCccHhHHhh
Q 035842 4 EKNTTLHEAMCHGSVHVVEILSRKDPDYPYSAKNYGKMPLYMAAEKGCLEMVDVLLS-TYTFMSHGSPSGKTALHAAA 80 (82)
Q Consensus 4 ~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~-~~~~~~~~~~~~~t~l~~a~ 80 (82)
.|.|+|+.|+.+|..++++.||..|++++ .+|..|.|+|+-|+++|+.+++++|+. -+.++...|.+|.|+|++|.
T Consensus 339 ~gQTALMLAVSHGr~d~vk~LLacgAdVN-iQDdDGSTALMCA~EHGhkEivklLLA~p~cd~sLtD~DgSTAl~IAl 415 (452)
T KOG0514|consen 339 HGQTALMLAVSHGRVDMVKALLACGADVN-IQDDDGSTALMCAAEHGHKEIVKLLLAVPSCDISLTDVDGSTALSIAL 415 (452)
T ss_pred hcchhhhhhhhcCcHHHHHHHHHccCCCc-cccCCccHHHhhhhhhChHHHHHHHhccCcccceeecCCCchhhhhHH
Confidence 36666666666666666666666666654 566666677766677777776666666 35666666666667666664
No 45
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.73 E-value=3.5e-17 Score=98.06 Aligned_cols=77 Identities=27% Similarity=0.305 Sum_probs=72.1
Q ss_pred CCccHHHHHHhcCCHHHHHHHHHhCCCCccccccCCCcHHHHHHHhCCHHHHHHHHhcCcccccCCCCCccHhHHhhh
Q 035842 4 EKNTTLHEAMCHGSVHVVEILSRKDPDYPYSAKNYGKMPLYMAAEKGCLEMVDVLLSTYTFMSHGSPSGKTALHAAAR 81 (82)
Q Consensus 4 ~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~ 81 (82)
++.++|+.|+..|+.++++.|++.|.+++ ..|..|.||||+|+..|+.+++++|+..|++++.+|.+|.||||+|++
T Consensus 524 ~~~~~L~~Aa~~g~~~~l~~Ll~~G~d~n-~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadin~~d~~G~TpL~~A~~ 600 (823)
T PLN03192 524 NMASNLLTVASTGNAALLEELLKAKLDPD-IGDSKGRTPLHIAASKGYEDCVLVLLKHACNVHIRDANGNTALWNAIS 600 (823)
T ss_pred cchhHHHHHHHcCCHHHHHHHHHCCCCCC-CCCCCCCCHHHHHHHcChHHHHHHHHhcCCCCCCcCCCCCCHHHHHHH
Confidence 45688999999999999999999999976 788999999999999999999999999999999999999999999975
No 46
>PHA02730 ankyrin-like protein; Provisional
Probab=99.73 E-value=4.6e-17 Score=95.17 Aligned_cols=80 Identities=19% Similarity=0.259 Sum_probs=69.1
Q ss_pred CCCCCccHHHHHHhcC---CHHHHHHHHHhCCCCccccccCCCcHHHHHHHhC--CHHHHHHHHhcCc--ccccCCCCCc
Q 035842 1 MNNEKNTTLHEAMCHG---SVHVVEILSRKDPDYPYSAKNYGKMPLYMAAEKG--CLEMVDVLLSTYT--FMSHGSPSGK 73 (82)
Q Consensus 1 ~d~~g~~~l~~a~~~~---~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~--~~~~~~~l~~~~~--~~~~~~~~~~ 73 (82)
+|..|+||||+|+..+ +.+++++|+++|+++. ..+..|+||||+|+..+ +.+++++|++.|+ +++..+..+.
T Consensus 37 kd~~G~TaLh~A~~~~~~~~~eivklLLs~GAdin-~kD~~G~TPLh~Aa~~~~~~~eIv~~Ll~~~~~~~~~~~~~~~d 115 (672)
T PHA02730 37 IDRRGNNALHCYVSNKCDTDIKIVRLLLSRGVERL-CRNNEGLTPLGVYSKRKYVKSQIVHLLISSYSNASNELTSNIND 115 (672)
T ss_pred cCCCCCcHHHHHHHcCCcCcHHHHHHHHhCCCCCc-ccCCCCCChHHHHHHcCCCcHHHHHHHHhcCCCCCcccccccCC
Confidence 3678999999999987 4899999999999976 78999999999999977 7999999999865 4577777789
Q ss_pred cHhHHhhh
Q 035842 74 TALHAAAR 81 (82)
Q Consensus 74 t~l~~a~~ 81 (82)
+|++.++.
T Consensus 116 ~~l~~y~~ 123 (672)
T PHA02730 116 FDLYSYMS 123 (672)
T ss_pred chHHHHHH
Confidence 99987764
No 47
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.73 E-value=4.9e-18 Score=95.22 Aligned_cols=75 Identities=29% Similarity=0.359 Sum_probs=50.4
Q ss_pred ccHHHHHHhcCCHHHHHHHHHhCCCCccccccCCCcHHHHHHHhCCHHHHHHHHhcCcccccCCCCCccHhHHhhh
Q 035842 6 NTTLHEAMCHGSVHVVEILSRKDPDYPYSAKNYGKMPLYMAAEKGCLEMVDVLLSTYTFMSHGSPSGKTALHAAAR 81 (82)
Q Consensus 6 ~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~ 81 (82)
.|||..||..|+.+++++|+++++++. ..+..|.|.|++|+-+|+.+++++|++.|++++.++..|.|+||.+++
T Consensus 118 StPLraACfDG~leivKyLvE~gad~~-IanrhGhTcLmIa~ykGh~~I~qyLle~gADvn~ks~kGNTALH~caE 192 (615)
T KOG0508|consen 118 STPLRAACFDGHLEIVKYLVEHGADPE-IANRHGHTCLMIACYKGHVDIAQYLLEQGADVNAKSYKGNTALHDCAE 192 (615)
T ss_pred CccHHHHHhcchhHHHHHHHHcCCCCc-ccccCCCeeEEeeeccCchHHHHHHHHhCCCcchhcccCchHHHhhhh
Confidence 466666666666666666666666653 556666677777766777777777766666766666666677666653
No 48
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.72 E-value=4.1e-17 Score=95.84 Aligned_cols=80 Identities=29% Similarity=0.322 Sum_probs=66.7
Q ss_pred CCCCCccHHHHHHhcCCHHHHHHHHHhCCCCccccccCCCcHHHHHHHhCCHHHHHHHHh-cC-cccccCCCCCccHhHH
Q 035842 1 MNNEKNTTLHEAMCHGSVHVVEILSRKDPDYPYSAKNYGKMPLYMAAEKGCLEMVDVLLS-TY-TFMSHGSPSGKTALHA 78 (82)
Q Consensus 1 ~d~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~-~~-~~~~~~~~~~~t~l~~ 78 (82)
+|.+|.||||+|++.|..+.+..|++.|++++ ..+.++.||||.|+.+|++.+++-|++ .+ ...+..|..|.||||+
T Consensus 269 ~d~dg~tpLH~a~r~G~~~svd~Ll~~Ga~I~-~kn~d~~spLH~AA~yg~~ntv~rLL~~~~~rllne~D~~g~tpLHl 347 (929)
T KOG0510|consen 269 EDNDGCTPLHYAARQGGPESVDNLLGFGASIN-SKNKDEESPLHFAAIYGRINTVERLLQESDTRLLNESDLHGMTPLHL 347 (929)
T ss_pred ccccCCchHHHHHHcCChhHHHHHHHcCCccc-ccCCCCCCchHHHHHcccHHHHHHHHhCcCccccccccccCCCchhh
Confidence 47889999999999999999999999999986 667888888888888888888888887 44 3456677788888888
Q ss_pred hhh
Q 035842 79 AAR 81 (82)
Q Consensus 79 a~~ 81 (82)
|++
T Consensus 348 aa~ 350 (929)
T KOG0510|consen 348 AAK 350 (929)
T ss_pred hhh
Confidence 875
No 49
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.72 E-value=8.6e-18 Score=94.27 Aligned_cols=78 Identities=27% Similarity=0.302 Sum_probs=72.4
Q ss_pred CCCCccHHHHHHhcCCHHHHHHHHHhCCCCccccccCCCcHHHHHHHhCCHHHHHHHHhcCcccccCCCCCccHhHHhhh
Q 035842 2 NNEKNTTLHEAMCHGSVHVVEILSRKDPDYPYSAKNYGKMPLYMAAEKGCLEMVDVLLSTYTFMSHGSPSGKTALHAAAR 81 (82)
Q Consensus 2 d~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~ 81 (82)
|+.|.|+||+||.+|+.+++++|++.|++++ ..+..|.|+||.|++.|+.+++++|+..|+.+. +|..|.|||..|+.
T Consensus 147 nrhGhTcLmIa~ykGh~~I~qyLle~gADvn-~ks~kGNTALH~caEsG~vdivq~Ll~~ga~i~-~d~~GmtPL~~Aa~ 224 (615)
T KOG0508|consen 147 NRHGHTCLMIACYKGHVDIAQYLLEQGADVN-AKSYKGNTALHDCAESGSVDIVQLLLKHGAKID-VDGHGMTPLLLAAV 224 (615)
T ss_pred ccCCCeeEEeeeccCchHHHHHHHHhCCCcc-hhcccCchHHHhhhhcccHHHHHHHHhCCceee-ecCCCCchHHHHhh
Confidence 6789999999999999999999999999976 788999999999999999999999999998886 47779999998874
No 50
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=99.71 E-value=4.9e-17 Score=96.60 Aligned_cols=79 Identities=25% Similarity=0.252 Sum_probs=70.7
Q ss_pred CCCccHHHHHHhcCCHHHHHHHHHhCCCCcccc-------------ccCCCcHHHHHHHhCCHHHHHHHHhcCcccccCC
Q 035842 3 NEKNTTLHEAMCHGSVHVVEILSRKDPDYPYSA-------------KNYGKMPLYMAAEKGCLEMVDVLLSTYTFMSHGS 69 (82)
Q Consensus 3 ~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~-------------~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~ 69 (82)
..|.||||+|+..|+.+++++|++.|++++... ...|.+||+.|+..++.+++++|++.|++++.+|
T Consensus 126 ~~G~TpLhlAa~~~~~eiVklLL~~GAdv~~~~~~~~~~~~~~~~~~~~g~tpL~~Aa~~~~~~iv~lLl~~gadin~~d 205 (743)
T TIGR00870 126 TPGITALHLAAHRQNYEIVKLLLERGASVPARACGDFFVKSQGVDSFYHGESPLNAAACLGSPSIVALLSEDPADILTAD 205 (743)
T ss_pred CCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCcCCchhhcCCCCCcccccccHHHHHHHhCCHHHHHHHhcCCcchhhHh
Confidence 469999999999999999999999999875211 1358999999999999999999999999999999
Q ss_pred CCCccHhHHhhh
Q 035842 70 PSGKTALHAAAR 81 (82)
Q Consensus 70 ~~~~t~l~~a~~ 81 (82)
..|.||+|+|+.
T Consensus 206 ~~g~T~Lh~A~~ 217 (743)
T TIGR00870 206 SLGNTLLHLLVM 217 (743)
T ss_pred hhhhHHHHHHHh
Confidence 999999999975
No 51
>PHA02917 ankyrin-like protein; Provisional
Probab=99.70 E-value=2.3e-16 Score=92.78 Aligned_cols=79 Identities=15% Similarity=0.090 Sum_probs=70.0
Q ss_pred CCCCccHHHHHHhcC-----------------------CHHHHHHHHHhCCCCccccccCCCcHHHHHHHhCCHHHHHHH
Q 035842 2 NNEKNTTLHEAMCHG-----------------------SVHVVEILSRKDPDYPYSAKNYGKMPLYMAAEKGCLEMVDVL 58 (82)
Q Consensus 2 d~~g~~~l~~a~~~~-----------------------~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l 58 (82)
|..|.||||.|+..+ ..++++.|+.+|++++ ..+..|.||||+|+..+..+++++|
T Consensus 393 ~~~G~TpL~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~GAdIN-~kd~~G~TpLh~Aa~~~~~~~v~~L 471 (661)
T PHA02917 393 LDDGEIPIGHLCKSNYGCYNFYTYTYKKGLCDMSYACPILSTINICLPYLKDIN-MIDKRGETLLHKAVRYNKQSLVSLL 471 (661)
T ss_pred CCCCCChhHHHHHhcccchhhhhhhhhhccchhhhhhhhHHHHHHHHHCCCCCC-CCCCCCcCHHHHHHHcCCHHHHHHH
Confidence 456999999987433 3567899999999976 7889999999999999999999999
Q ss_pred HhcCcccccCCCCCccHhHHhhh
Q 035842 59 LSTYTFMSHGSPSGKTALHAAAR 81 (82)
Q Consensus 59 ~~~~~~~~~~~~~~~t~l~~a~~ 81 (82)
++.|++++.++..|.|||++|+.
T Consensus 472 l~~GAdin~~d~~G~T~L~~A~~ 494 (661)
T PHA02917 472 LESGSDVNIRSNNGYTCIAIAIN 494 (661)
T ss_pred HHCcCCCCCCCCCCCCHHHHHHH
Confidence 99999999999999999999973
No 52
>PHA02917 ankyrin-like protein; Provisional
Probab=99.70 E-value=1.8e-16 Score=93.21 Aligned_cols=81 Identities=14% Similarity=0.081 Sum_probs=66.9
Q ss_pred CCCCCccHHHHHH--hcCCHHHHHHHHHhCCCCccc--cccCC-----------CcHHHHHHH-----------hCCHHH
Q 035842 1 MNNEKNTTLHEAM--CHGSVHVVEILSRKDPDYPYS--AKNYG-----------KMPLYMAAE-----------KGCLEM 54 (82)
Q Consensus 1 ~d~~g~~~l~~a~--~~~~~~~~~~ll~~~~~~~~~--~~~~~-----------~t~l~~a~~-----------~~~~~~ 54 (82)
+|..|+||||.++ ..|+.+++++|+++|++++.. .+..| .||||+|+. .++.++
T Consensus 132 ~d~~g~T~L~~~~a~~~~~~eivklLi~~Ga~vn~~d~~~~~g~~~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~ei 211 (661)
T PHA02917 132 KCENHRSVIENYVMTDDPVPEIIDLFIENGCSVLYEDEDDEYGYAYDDYQPRNCGTVLHLYIISHLYSESDTRAYVRPEV 211 (661)
T ss_pred cCCCCccHHHHHHHccCCCHHHHHHHHHcCCCccccccccccccccccccccccccHHHHHHhhcccccccccccCcHHH
Confidence 3678999999654 468999999999999987521 12233 599999975 458899
Q ss_pred HHHHHhcCcccccCCCCCccHhHHhhh
Q 035842 55 VDVLLSTYTFMSHGSPSGKTALHAAAR 81 (82)
Q Consensus 55 ~~~l~~~~~~~~~~~~~~~t~l~~a~~ 81 (82)
+++|++.|++++.+|..|.||||+|++
T Consensus 212 v~~Li~~Gadvn~~d~~G~TpLh~A~~ 238 (661)
T PHA02917 212 VKCLINHGIKPSSIDKNYCTALQYYIK 238 (661)
T ss_pred HHHHHHCCCCcccCCCCCCcHHHHHHH
Confidence 999999999999999999999999986
No 53
>PHA02989 ankyrin repeat protein; Provisional
Probab=99.70 E-value=2.5e-16 Score=90.26 Aligned_cols=80 Identities=16% Similarity=0.083 Sum_probs=60.2
Q ss_pred CCCCccHHHHHHhc---CCHHHHHHHHHhCCCCccccccCCCcHHHHHHHh--CCHHHHHHHHhcCccccc-CCCCCccH
Q 035842 2 NNEKNTTLHEAMCH---GSVHVVEILSRKDPDYPYSAKNYGKMPLYMAAEK--GCLEMVDVLLSTYTFMSH-GSPSGKTA 75 (82)
Q Consensus 2 d~~g~~~l~~a~~~---~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~--~~~~~~~~l~~~~~~~~~-~~~~~~t~ 75 (82)
|..|.||||.|+.. ++.+++++|++.|+++++..+..|.||||+++.. ++.+++++|++.|++++. .+..|.||
T Consensus 105 d~~g~tpL~~a~~~~~~~~~eiv~~Ll~~Gadin~~~d~~g~tpLh~a~~~~~~~~~iv~~Ll~~Gadi~~~~~~~g~tp 184 (494)
T PHA02989 105 TFNGVSPIVCFIYNSNINNCDMLRFLLSKGINVNDVKNSRGYNLLHMYLESFSVKKDVIKILLSFGVNLFEKTSLYGLTP 184 (494)
T ss_pred CCCCCcHHHHHHHhcccCcHHHHHHHHHCCCCcccccCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCccccccccCCCh
Confidence 56788888877644 5678888888888886336677888888887654 467888888888888876 56778888
Q ss_pred hHHhhh
Q 035842 76 LHAAAR 81 (82)
Q Consensus 76 l~~a~~ 81 (82)
|++|++
T Consensus 185 L~~a~~ 190 (494)
T PHA02989 185 MNIYLR 190 (494)
T ss_pred HHHHHh
Confidence 887653
No 54
>PHA02798 ankyrin-like protein; Provisional
Probab=99.70 E-value=2.1e-16 Score=90.46 Aligned_cols=80 Identities=15% Similarity=0.201 Sum_probs=70.7
Q ss_pred CCCCCccHHHHHHhcC---CHHHHHHHHHhCCCCccccccCCCcHHHHHHHhCC---HHHHHHHHhcCcccccCC-CCCc
Q 035842 1 MNNEKNTTLHEAMCHG---SVHVVEILSRKDPDYPYSAKNYGKMPLYMAAEKGC---LEMVDVLLSTYTFMSHGS-PSGK 73 (82)
Q Consensus 1 ~d~~g~~~l~~a~~~~---~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~---~~~~~~l~~~~~~~~~~~-~~~~ 73 (82)
+|..|.||||+|+..+ +.+++++|++.|++++ ..+..|.||||+|+..+. .+++++|++.|++++..+ ..|.
T Consensus 105 ~d~~G~TpLh~a~~~~~~~~~~iv~~Ll~~Gadvn-~~d~~g~tpL~~a~~~~~~~~~~vv~~Ll~~gadin~~~~~~~~ 183 (489)
T PHA02798 105 KNSDGETPLYCLLSNGYINNLEILLFMIENGADTT-LLDKDGFTMLQVYLQSNHHIDIEIIKLLLEKGVDINTHNNKEKY 183 (489)
T ss_pred CCCCcCcHHHHHHHcCCcChHHHHHHHHHcCCCcc-ccCCCCCcHHHHHHHcCCcchHHHHHHHHHhCCCcccccCcCCC
Confidence 3678999999999875 6899999999999975 788999999999999987 899999999999998874 5788
Q ss_pred cHhHHhhh
Q 035842 74 TALHAAAR 81 (82)
Q Consensus 74 t~l~~a~~ 81 (82)
||+|.+.+
T Consensus 184 t~Lh~~~~ 191 (489)
T PHA02798 184 DTLHCYFK 191 (489)
T ss_pred cHHHHHHH
Confidence 99997753
No 55
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=99.70 E-value=8.3e-16 Score=73.44 Aligned_cols=79 Identities=35% Similarity=0.526 Sum_probs=62.7
Q ss_pred CCCCccHHHHHHhcCCHHHHHHHHHhCCCCccccccCCCcHHHHHHHhCCHHHHHHHHhcCcccccCCCCCccHhHHhhh
Q 035842 2 NNEKNTTLHEAMCHGSVHVVEILSRKDPDYPYSAKNYGKMPLYMAAEKGCLEMVDVLLSTYTFMSHGSPSGKTALHAAAR 81 (82)
Q Consensus 2 d~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~ 81 (82)
|.+|.||||+|+..++.+++++|+..+.... ..+..|.+|++.++..+..+++++++..+..++..+..+.||+|+|++
T Consensus 4 ~~~g~t~l~~a~~~~~~~~i~~li~~~~~~~-~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~l~~a~~ 82 (126)
T cd00204 4 DEDGRTPLHLAASNGHLEVVKLLLENGADVN-AKDNDGRTPLHLAAKNGHLEIVKLLLEKGADVNARDKDGNTPLHLAAR 82 (126)
T ss_pred CcCCCCHHHHHHHcCcHHHHHHHHHcCCCCC-ccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHH
Confidence 5678888888888888888888888877643 566778888888888888888888888877777777778888887765
No 56
>PHA02876 ankyrin repeat protein; Provisional
Probab=99.69 E-value=3.4e-16 Score=92.40 Aligned_cols=77 Identities=23% Similarity=0.159 Sum_probs=44.4
Q ss_pred CCCccHHHHHHhc-CCHHHHHHHHHhCCCCccccccCCCcHHHHHHHhCCHHHHHHHHhcCcccccCCCCCccHhHHhh
Q 035842 3 NEKNTTLHEAMCH-GSVHVVEILSRKDPDYPYSAKNYGKMPLYMAAEKGCLEMVDVLLSTYTFMSHGSPSGKTALHAAA 80 (82)
Q Consensus 3 ~~g~~~l~~a~~~-~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~ 80 (82)
..|.||||+|+.. ++.++++.|+..|++++ ..+..|.||||+|+..++.+++++|++.|++++..+..|.||||+|+
T Consensus 339 ~~g~TpLh~A~~~~~~~~iv~lLl~~gadin-~~d~~G~TpLh~Aa~~~~~~iv~~Ll~~gad~~~~~~~g~T~Lh~A~ 416 (682)
T PHA02876 339 RLYITPLHQASTLDRNKDIVITLLELGANVN-ARDYCDKTPIHYAAVRNNVVIINTLLDYGADIEALSQKIGTALHFAL 416 (682)
T ss_pred cCCCcHHHHHHHhCCcHHHHHHHHHcCCCCc-cCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCccccCCCCCchHHHHH
Confidence 3455555555543 23455555555555543 45555666666666666666666666666666666666666666654
No 57
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.69 E-value=1.5e-16 Score=93.50 Aligned_cols=80 Identities=31% Similarity=0.343 Sum_probs=71.9
Q ss_pred CCCCccHHHHHHhcCCHHHHHHHHHhCCCCccc--------------cccCCCcHHHHHHHhCCHHHHHHHHhcCccccc
Q 035842 2 NNEKNTTLHEAMCHGSVHVVEILSRKDPDYPYS--------------AKNYGKMPLYMAAEKGCLEMVDVLLSTYTFMSH 67 (82)
Q Consensus 2 d~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~--------------~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~ 67 (82)
|..+.+|||.|+..|+.+.++.+++.+...... .|.+|.||||+|+..|.+++++.|+..|++++.
T Consensus 222 ~n~~~~pLhlAve~g~~e~lk~~L~n~~~~a~~~~~~~~q~kelv~~~d~dg~tpLH~a~r~G~~~svd~Ll~~Ga~I~~ 301 (929)
T KOG0510|consen 222 NNEKATPLHLAVEGGDIEMLKMCLQNGKKIADVQLDAMQQEKELVNDEDNDGCTPLHYAARQGGPESVDNLLGFGASINS 301 (929)
T ss_pred cCCCCcchhhhhhcCCHHHHHHHHhCccccchhhhHHHHHHHHHhhcccccCCchHHHHHHcCChhHHHHHHHcCCcccc
Confidence 667899999999999999999999987765322 355799999999999999999999999999999
Q ss_pred CCCCCccHhHHhhh
Q 035842 68 GSPSGKTALHAAAR 81 (82)
Q Consensus 68 ~~~~~~t~l~~a~~ 81 (82)
++.++.||||.|++
T Consensus 302 kn~d~~spLH~AA~ 315 (929)
T KOG0510|consen 302 KNKDEESPLHFAAI 315 (929)
T ss_pred cCCCCCCchHHHHH
Confidence 99999999999986
No 58
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.69 E-value=3.7e-16 Score=92.06 Aligned_cols=73 Identities=26% Similarity=0.265 Sum_probs=67.3
Q ss_pred HHHHHHhcCCHHHHHHHHHhCCCCccccccCCCcHHHHHHHhCCHHHHHHHHhcCcccccCCCCCccHhHHhhh
Q 035842 8 TLHEAMCHGSVHVVEILSRKDPDYPYSAKNYGKMPLYMAAEKGCLEMVDVLLSTYTFMSHGSPSGKTALHAAAR 81 (82)
Q Consensus 8 ~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~ 81 (82)
.|+.++..|+.+.++.|+..|++++ ..+..|.||||+|+..|+.+++++|++.|++++.+|..|.||||+|+.
T Consensus 85 ~L~~aa~~G~~~~vk~LL~~Gadin-~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadvn~~d~~G~TpLh~A~~ 157 (664)
T PTZ00322 85 ELCQLAASGDAVGARILLTGGADPN-CRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEE 157 (664)
T ss_pred HHHHHHHcCCHHHHHHHHHCCCCCC-CcCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
Confidence 4788999999999999999999875 678899999999999999999999999999999999999999999985
No 59
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.68 E-value=1.6e-16 Score=86.87 Aligned_cols=81 Identities=27% Similarity=0.240 Sum_probs=69.4
Q ss_pred CCCCCccHHHHHHhcC-----CHHHHHHHHHhCCCCccccccCCCcHHHHHHHhCCHHHHHHHHhcCcccccCCCCCccH
Q 035842 1 MNNEKNTTLHEAMCHG-----SVHVVEILSRKDPDYPYSAKNYGKMPLYMAAEKGCLEMVDVLLSTYTFMSHGSPSGKTA 75 (82)
Q Consensus 1 ~d~~g~~~l~~a~~~~-----~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~ 75 (82)
+|+-|.||++.++... +.+++..|++.|-. +-.....|.|+|++|+.+|..++++.|+..|+++|.+|.+|.|+
T Consensus 298 qNrAGYtpiMLaALA~lk~~~d~~vV~~LF~mgnV-NaKAsQ~gQTALMLAVSHGr~d~vk~LLacgAdVNiQDdDGSTA 376 (452)
T KOG0514|consen 298 QNRAGYTPVMLAALAKLKQPADRTVVERLFKMGDV-NAKASQHGQTALMLAVSHGRVDMVKALLACGADVNIQDDDGSTA 376 (452)
T ss_pred cccccccHHHHHHHHhhcchhhHHHHHHHHhccCc-chhhhhhcchhhhhhhhcCcHHHHHHHHHccCCCccccCCccHH
Confidence 3677999999887543 46778888887754 44567789999999999999999999999999999999999999
Q ss_pred hHHhhhC
Q 035842 76 LHAAARE 82 (82)
Q Consensus 76 l~~a~~~ 82 (82)
|++|+++
T Consensus 377 LMCA~EH 383 (452)
T KOG0514|consen 377 LMCAAEH 383 (452)
T ss_pred Hhhhhhh
Confidence 9999974
No 60
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=99.66 E-value=1.6e-15 Score=78.59 Aligned_cols=81 Identities=28% Similarity=0.357 Sum_probs=74.5
Q ss_pred CCCCCccHHHHHHhcCC-----HHHHHHHHHhCC--CCccccccCCCcHHHHHHHhCCHHHHHHHHhcCcccccCCCCCc
Q 035842 1 MNNEKNTTLHEAMCHGS-----VHVVEILSRKDP--DYPYSAKNYGKMPLYMAAEKGCLEMVDVLLSTYTFMSHGSPSGK 73 (82)
Q Consensus 1 ~d~~g~~~l~~a~~~~~-----~~~~~~ll~~~~--~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~ 73 (82)
.|..|.|++|+|+..++ .++++.|++.++ +.....+..|.||+|+|+..++.+++..++..|++++..+..|.
T Consensus 102 ~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~ 181 (235)
T COG0666 102 KDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNLRDEDGNTPLHWAALNGDADIVELLLEAGADPNSRNSYGV 181 (235)
T ss_pred ccCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCCCccccCCCCCchhHHHHHcCchHHHHHHHhcCCCCcccccCCC
Confidence 36789999999999999 999999999999 55656799999999999999999999999999999999999999
Q ss_pred cHhHHhhh
Q 035842 74 TALHAAAR 81 (82)
Q Consensus 74 t~l~~a~~ 81 (82)
|++++|+.
T Consensus 182 t~l~~a~~ 189 (235)
T COG0666 182 TALDPAAK 189 (235)
T ss_pred cchhhhcc
Confidence 99999875
No 61
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=99.65 E-value=1.3e-15 Score=76.45 Aligned_cols=73 Identities=25% Similarity=0.204 Sum_probs=68.4
Q ss_pred HHHHHhcCCHHHHHHHHHhCCCCccccccCCCcHHHHHHHhCCHHHHHHHHhcCcccccCCCCCccHhHHhhh
Q 035842 9 LHEAMCHGSVHVVEILSRKDPDYPYSAKNYGKMPLYMAAEKGCLEMVDVLLSTYTFMSHGSPSGKTALHAAAR 81 (82)
Q Consensus 9 l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~ 81 (82)
+.+|+..+....++.|++..++..+..|..|.||||-|+-.|+.++++.|+..|++.+.+...|+||||.||+
T Consensus 67 ~lwaae~nrl~eV~~lL~e~an~vNtrD~D~YTpLHRAaYn~h~div~~ll~~gAn~~a~T~~GWTPLhSAck 139 (228)
T KOG0512|consen 67 LLWAAEKNRLTEVQRLLSEKANHVNTRDEDEYTPLHRAAYNGHLDIVHELLLSGANKEAKTNEGWTPLHSACK 139 (228)
T ss_pred HHHHHhhccHHHHHHHHHhccccccccccccccHHHHHHhcCchHHHHHHHHccCCcccccccCccchhhhhc
Confidence 6688999999999999999888777889999999999999999999999999999999999999999999985
No 62
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.64 E-value=5.3e-16 Score=65.58 Aligned_cols=45 Identities=31% Similarity=0.350 Sum_probs=30.3
Q ss_pred CCCCCccHHHHHHhcCCHHHHHHHHHhCCCCccccccCCCcHHHHH
Q 035842 1 MNNEKNTTLHEAMCHGSVHVVEILSRKDPDYPYSAKNYGKMPLYMA 46 (82)
Q Consensus 1 ~d~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a 46 (82)
.|..|.||||+|+..|+.+++++|++.+.++. ..+..|+||+++|
T Consensus 12 ~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~~-~~d~~G~Tpl~~A 56 (56)
T PF13857_consen 12 QDKYGNTPLHWAARYGHSEVVRLLLQNGADPN-AKDKDGQTPLHYA 56 (56)
T ss_dssp --TTS--HHHHHHHHT-HHHHHHHHHCT--TT----TTS--HHHH-
T ss_pred cCCCCCcHHHHHHHcCcHHHHHHHHHCcCCCC-CCcCCCCCHHHhC
Confidence 47889999999999999999999999999975 8899999999986
No 63
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.64 E-value=6.7e-16 Score=82.85 Aligned_cols=77 Identities=27% Similarity=0.324 Sum_probs=71.4
Q ss_pred CCCCccHHHHHHhcCCHHHHHHHHHhCCCCccccccCCCcHHHHHHHhCCHHHHHHHHhcCcccccCCCCCccHhHHh
Q 035842 2 NNEKNTTLHEAMCHGSVHVVEILSRKDPDYPYSAKNYGKMPLYMAAEKGCLEMVDVLLSTYTFMSHGSPSGKTALHAA 79 (82)
Q Consensus 2 d~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a 79 (82)
|.-..||||.|+..|+.++++.|++..++++ ..+..|.||||+||.-|.-.+++-|+..|+.+++.++.|.||+..|
T Consensus 64 nmgddtplhlaaahghrdivqkll~~kadvn-avnehgntplhyacfwgydqiaedli~~ga~v~icnk~g~tpldka 140 (448)
T KOG0195|consen 64 NMGDDTPLHLAAAHGHRDIVQKLLSRKADVN-AVNEHGNTPLHYACFWGYDQIAEDLISCGAAVNICNKKGMTPLDKA 140 (448)
T ss_pred cCCCCcchhhhhhcccHHHHHHHHHHhcccc-hhhccCCCchhhhhhhcHHHHHHHHHhccceeeecccCCCCchhhh
Confidence 3446789999999999999999999999976 8899999999999999999999999999999999999999999865
No 64
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=99.63 E-value=2.9e-15 Score=80.19 Aligned_cols=80 Identities=25% Similarity=0.247 Sum_probs=75.4
Q ss_pred CCCCCccHHHHHHhcCCHHHHHHHHHhCCCCccccccCCCcHHHHHHHhCCHHHHHHHHhcCcccccCCCCCccHhHHhh
Q 035842 1 MNNEKNTTLHEAMCHGSVHVVEILSRKDPDYPYSAKNYGKMPLYMAAEKGCLEMVDVLLSTYTFMSHGSPSGKTALHAAA 80 (82)
Q Consensus 1 ~d~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~ 80 (82)
.|..|+++|..|+.+|+.+.++.+++.|++++..++..+.|||++|+..|..+++.+|+..|+.....|.-|+|+-..|+
T Consensus 41 ~D~sGMs~LahAaykGnl~~v~lll~~gaDvN~~qhg~~YTpLmFAALSGn~dvcrllldaGa~~~~vNsvgrTAaqmAA 120 (396)
T KOG1710|consen 41 RDPSGMSVLAHAAYKGNLTLVELLLELGADVNDKQHGTLYTPLMFAALSGNQDVCRLLLDAGARMYLVNSVGRTAAQMAA 120 (396)
T ss_pred cCCCcccHHHHHHhcCcHHHHHHHHHhCCCcCcccccccccHHHHHHHcCCchHHHHHHhccCccccccchhhhHHHHHH
Confidence 47899999999999999999999999999999888999999999999999999999999999999999999999987775
No 65
>PHA02795 ankyrin-like protein; Provisional
Probab=99.61 E-value=6e-15 Score=83.16 Aligned_cols=78 Identities=17% Similarity=0.146 Sum_probs=62.5
Q ss_pred CCccHHHHHHhcCCHHHHHHHHHhCCCCcccc-----ccCCCcHHHHHHHhCCHHHHHHHHhcCcccccCCCCCccHhHH
Q 035842 4 EKNTTLHEAMCHGSVHVVEILSRKDPDYPYSA-----KNYGKMPLYMAAEKGCLEMVDVLLSTYTFMSHGSPSGKTALHA 78 (82)
Q Consensus 4 ~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~-----~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~ 78 (82)
++.||+|.|+..++.+++++|+++|+...+.. +..+.+++|.+...+..+++++|++.|++++.+|..|.||||+
T Consensus 148 ~~~t~lh~A~~~~~~eIVk~Lls~Ga~~~n~~~~~l~~~~~~t~l~~a~~~~~~eIve~LIs~GADIN~kD~~G~TpLh~ 227 (437)
T PHA02795 148 ECLNAYFRGICKKESSVVEFILNCGIPDENDVKLDLYKIIQYTRGFLVDEPTVLEIYKLCIPYIEDINQLDAGGRTLLYR 227 (437)
T ss_pred CCCCHHHHHHHcCcHHHHHHHHhcCCcccccccchhhhhhccchhHHHHhcCHHHHHHHHHhCcCCcCcCCCCCCCHHHH
Confidence 45678888888888888888888876432221 1346788888888889999999999999999999999999999
Q ss_pred hhh
Q 035842 79 AAR 81 (82)
Q Consensus 79 a~~ 81 (82)
|++
T Consensus 228 Aa~ 230 (437)
T PHA02795 228 AIY 230 (437)
T ss_pred HHH
Confidence 985
No 66
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=99.61 E-value=3e-14 Score=68.02 Aligned_cols=79 Identities=33% Similarity=0.497 Sum_probs=71.7
Q ss_pred CCCCccHHHHHHhcCCHHHHHHHHHhCCCCccccccCCCcHHHHHHHhCCHHHHHHHHhcCcccccCCCCCccHhHHhhh
Q 035842 2 NNEKNTTLHEAMCHGSVHVVEILSRKDPDYPYSAKNYGKMPLYMAAEKGCLEMVDVLLSTYTFMSHGSPSGKTALHAAAR 81 (82)
Q Consensus 2 d~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~ 81 (82)
|..|.+++|.++..++.+++++++..+.... ..+..+.+|+|+|+..++.+++++|+..+.+.+..+..+.||++.|..
T Consensus 37 ~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~-~~~~~~~~~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~l~~~~~ 115 (126)
T cd00204 37 DNDGRTPLHLAAKNGHLEIVKLLLEKGADVN-ARDKDGNTPLHLAARNGNLDVVKLLLKHGADVNARDKDGRTPLHLAAK 115 (126)
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHcCCCcc-ccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHh
Confidence 5678999999999999999999999997654 567889999999999999999999999998898899999999999875
No 67
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.61 E-value=6.5e-15 Score=86.94 Aligned_cols=78 Identities=29% Similarity=0.315 Sum_probs=69.3
Q ss_pred CCCCCccHHHHHHhcCCHHHHHHHHHhCCCCccccccCCCcHHHHHHHhCCHHHHHHHHhc-------CcccccCCCCCc
Q 035842 1 MNNEKNTTLHEAMCHGSVHVVEILSRKDPDYPYSAKNYGKMPLYMAAEKGCLEMVDVLLST-------YTFMSHGSPSGK 73 (82)
Q Consensus 1 ~d~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~-------~~~~~~~~~~~~ 73 (82)
.|..|+||||+|+..|+.+++++|++.|++++ ..+..|.||||+|+..++.+++++|+.+ |++.+..+..|.
T Consensus 111 ~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadvn-~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~ga~~~~~~~~g~ 189 (664)
T PTZ00322 111 RDYDGRTPLHIACANGHVQVVRVLLEFGADPT-LLDKDGKTPLELAEENGFREVVQLLSRHSQCHFELGANAKPDSFTGK 189 (664)
T ss_pred cCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCC-CCCCCCCCHHHHHHHCCcHHHHHHHHhCCCcccccCCCCCccccCCC
Confidence 36789999999999999999999999999975 7889999999999999999999999998 788877777777
Q ss_pred cHhHHh
Q 035842 74 TALHAA 79 (82)
Q Consensus 74 t~l~~a 79 (82)
+|+..+
T Consensus 190 ~~~~~~ 195 (664)
T PTZ00322 190 PPSLED 195 (664)
T ss_pred Cccchh
Confidence 776543
No 68
>PHA02792 ankyrin-like protein; Provisional
Probab=99.60 E-value=1e-14 Score=85.00 Aligned_cols=76 Identities=13% Similarity=0.160 Sum_probs=66.0
Q ss_pred CccHHHHHHhcCCH---HHHHHHHHhCCCCccccccCCCcHHHHHHHhCCHHHHHHHHhcCcccccCCCCCccHhHHhhh
Q 035842 5 KNTTLHEAMCHGSV---HVVEILSRKDPDYPYSAKNYGKMPLYMAAEKGCLEMVDVLLSTYTFMSHGSPSGKTALHAAAR 81 (82)
Q Consensus 5 g~~~l~~a~~~~~~---~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~ 81 (82)
+.||||.|+..... +++++++.+|++++ ..+..|.||||+|+..++.+++++|++.|++++.++..|.|||++|..
T Consensus 374 ~~TpLh~A~~n~~~~v~~IlklLIs~GADIN-~kD~~G~TPLh~Aa~~~n~eivelLLs~GADIN~kD~~G~TpL~~A~~ 452 (631)
T PHA02792 374 NIMPLFPTLSIHESDVLSILKLCKPYIDDIN-KIDKHGRSILYYCIESHSVSLVEWLIDNGADINITTKYGSTCIGICVI 452 (631)
T ss_pred ChhHHHHHHHhccHhHHHHHHHHHhcCCccc-cccccCcchHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHH
Confidence 46899987766544 45788899999976 788999999999999999999999999999999999999999999863
No 69
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=99.60 E-value=1.5e-15 Score=78.70 Aligned_cols=78 Identities=22% Similarity=0.249 Sum_probs=72.7
Q ss_pred CCCccHHHHHHhcCCHHHHHHHHHhCCCCccccccCCCcHHHHHHHhCCHHHHHHHHhcCcccccCCCCCccHhHHhhh
Q 035842 3 NEKNTTLHEAMCHGSVHVVEILSRKDPDYPYSAKNYGKMPLYMAAEKGCLEMVDVLLSTYTFMSHGSPSGKTALHAAAR 81 (82)
Q Consensus 3 ~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~ 81 (82)
+...++|..|++.|..+++++|+.++.+++ ..|++|-|||.+|++.++.+|++-|+..|++++..+..|.+++.+|+.
T Consensus 191 k~resALsLAt~ggytdiV~lLL~r~vdVN-vyDwNGgTpLlyAvrgnhvkcve~Ll~sGAd~t~e~dsGy~~mdlAVa 268 (296)
T KOG0502|consen 191 KYRESALSLATRGGYTDIVELLLTREVDVN-VYDWNGGTPLLYAVRGNHVKCVESLLNSGADVTQEDDSGYWIMDLAVA 268 (296)
T ss_pred hhhhhhHhHHhcCChHHHHHHHHhcCCCcc-eeccCCCceeeeeecCChHHHHHHHHhcCCCcccccccCCcHHHHHHH
Confidence 345678999999999999999999999986 889999999999999999999999999999999999999999999874
No 70
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.60 E-value=3.8e-15 Score=62.52 Aligned_cols=43 Identities=40% Similarity=0.563 Sum_probs=36.4
Q ss_pred CCcHHHHHHHhCCHHHHHHHHhcCcccccCCCCCccHhHHhhh
Q 035842 39 GKMPLYMAAEKGCLEMVDVLLSTYTFMSHGSPSGKTALHAAAR 81 (82)
Q Consensus 39 ~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~ 81 (82)
|.||+|+|+..|+.+++++|++.|.+++.+|.+|.||||+|++
T Consensus 1 g~t~lh~A~~~g~~~~~~~Ll~~~~din~~d~~g~t~lh~A~~ 43 (54)
T PF13637_consen 1 GRTPLHWAARSGNLEIVKLLLEHGADINAQDEDGRTPLHYAAK 43 (54)
T ss_dssp SSBHHHHHHHTT-HHHHHHHHHTTSGTT-B-TTS--HHHHHHH
T ss_pred CChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
Confidence 6899999999999999999999999999999999999999986
No 71
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=99.59 E-value=6e-15 Score=67.23 Aligned_cols=73 Identities=21% Similarity=0.227 Sum_probs=64.4
Q ss_pred cHHHHHHhcCCHHHHHHHHHhCCCCccccccCCCcHHHHHHHhCCHHHHHHHHhcCcccccCCCCCccHhHHhhh
Q 035842 7 TTLHEAMCHGSVHVVEILSRKDPDYPYSAKNYGKMPLYMAAEKGCLEMVDVLLSTYTFMSHGSPSGKTALHAAAR 81 (82)
Q Consensus 7 ~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~ 81 (82)
..+.+++..|.++.++..+..|-+++ ....|++|||+|+-.|+.++++||+..|++++.+|+.|.|||..|+.
T Consensus 4 ~~~~W~vkNG~~DeVk~~v~~g~nVn--~~~ggR~plhyAAD~GQl~ilefli~iGA~i~~kDKygITPLLsAvw 76 (117)
T KOG4214|consen 4 MSVAWNVKNGEIDEVKQSVNEGLNVN--EIYGGRTPLHYAADYGQLSILEFLISIGANIQDKDKYGITPLLSAVW 76 (117)
T ss_pred hhHhhhhccCcHHHHHHHHHccccHH--HHhCCcccchHhhhcchHHHHHHHHHhccccCCccccCCcHHHHHHH
Confidence 45778899999999998888886654 34589999999999999999999999999999999999999998874
No 72
>PHA02730 ankyrin-like protein; Provisional
Probab=99.59 E-value=1.4e-14 Score=85.10 Aligned_cols=79 Identities=20% Similarity=0.176 Sum_probs=67.0
Q ss_pred CCCCccHHHH--HHh-cC---------CHHHHHHHHHhCCCCccccccCCCcHHHHHHHhCCHHHHHHHHhcCcccccCC
Q 035842 2 NNEKNTTLHE--AMC-HG---------SVHVVEILSRKDPDYPYSAKNYGKMPLYMAAEKGCLEMVDVLLSTYTFMSHGS 69 (82)
Q Consensus 2 d~~g~~~l~~--a~~-~~---------~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~ 69 (82)
|..|.||||. ++. .+ ..+++++|+.+|++++ ..+..|.||||+|+..++.+++++|++.|++++.++
T Consensus 414 d~~G~T~Lh~~i~a~~~n~~~~~~e~~~~~ivk~LIs~GADIN-akD~~G~TPLh~Aa~~~~~eive~LI~~GAdIN~~d 492 (672)
T PHA02730 414 SNNGRLCMYGLILSRFNNCGYHCYETILIDVFDILSKYMDDID-MIDNENKTLLYYAVDVNNIQFARRLLEYGASVNTTS 492 (672)
T ss_pred ccCCCchHhHHHHHHhccccccccchhHHHHHHHHHhcccchh-ccCCCCCCHHHHHHHhCCHHHHHHHHHCCCCCCCCC
Confidence 5679999984 232 22 2356899999999976 789999999999999999999999999999999999
Q ss_pred C-CCccHhHHhhh
Q 035842 70 P-SGKTALHAAAR 81 (82)
Q Consensus 70 ~-~~~t~l~~a~~ 81 (82)
. .|.||+|+|+.
T Consensus 493 ~~~g~TaL~~Aa~ 505 (672)
T PHA02730 493 RSIINTAIQKSSY 505 (672)
T ss_pred CcCCcCHHHHHHH
Confidence 7 58999999864
No 73
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.59 E-value=2e-14 Score=71.63 Aligned_cols=63 Identities=21% Similarity=0.188 Sum_probs=56.7
Q ss_pred CCCccHHHHHHhcCCHHHHHHHHHh-CCCCccccccCCCcHHHHHHHhCCHHHHHHHHhcCcccc
Q 035842 3 NEKNTTLHEAMCHGSVHVVEILSRK-DPDYPYSAKNYGKMPLYMAAEKGCLEMVDVLLSTYTFMS 66 (82)
Q Consensus 3 ~~g~~~l~~a~~~~~~~~~~~ll~~-~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~ 66 (82)
..|.||||+|+..++.+++++|+.. +.+++ ..+..|.|||++|+..++.+++++|+..|++.+
T Consensus 90 ~~g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~n-~~~~~g~tpL~~A~~~~~~~i~~~Ll~~ga~~~ 153 (154)
T PHA02736 90 VFGNTPLHIAVYTQNYELATWLCNQPGVNME-ILNYAFKTPYYVACERHDAKMMNILRAKGAQCK 153 (154)
T ss_pred CCCCcHHHHHHHhCCHHHHHHHHhCCCCCCc-cccCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 4799999999999999999999985 77765 678999999999999999999999999887654
No 74
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=99.59 E-value=3.8e-15 Score=84.90 Aligned_cols=65 Identities=28% Similarity=0.350 Sum_probs=52.2
Q ss_pred CCCCccHHHHHHhcCCHHHHHHHHHhCCCCccccccCCCcHHHHHHHhCCHHHHHHHHhcCccccc
Q 035842 2 NNEKNTTLHEAMCHGSVHVVEILSRKDPDYPYSAKNYGKMPLYMAAEKGCLEMVDVLLSTYTFMSH 67 (82)
Q Consensus 2 d~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~ 67 (82)
|.+|.|+||-|++.|+.+++++|+..|++++ ..|.+||||||-|+..+...+++.|++.|+.+-+
T Consensus 580 NdEGITaLHNAiCaghyeIVkFLi~~ganVN-a~DSdGWTPLHCAASCNnv~~ckqLVe~GaavfA 644 (752)
T KOG0515|consen 580 NDEGITALHNAICAGHYEIVKFLIEFGANVN-AADSDGWTPLHCAASCNNVPMCKQLVESGAAVFA 644 (752)
T ss_pred CccchhHHhhhhhcchhHHHHHHHhcCCccc-CccCCCCchhhhhhhcCchHHHHHHHhccceEEe
Confidence 5678888888888888888888888888865 7788888888888888888888888887766543
No 75
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=99.58 E-value=2.1e-15 Score=88.28 Aligned_cols=79 Identities=27% Similarity=0.258 Sum_probs=73.0
Q ss_pred CCCCccHHHHHHhcCCHHHHHHHHHhCCCCccccccCCCcHHHHHHHhCCHHHHHHHHhcCcccccCCCCCccHhHHhhh
Q 035842 2 NNEKNTTLHEAMCHGSVHVVEILSRKDPDYPYSAKNYGKMPLYMAAEKGCLEMVDVLLSTYTFMSHGSPSGKTALHAAAR 81 (82)
Q Consensus 2 d~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~ 81 (82)
|.+|.+|||+|++.|+.+++++++.++.. .+.++..|.+|||.+++.|+.+++.+|+.+|++.-.+|.++.|++.+|++
T Consensus 79 d~kg~~plhlaaw~g~~e~vkmll~q~d~-~na~~~e~~tplhlaaqhgh~dvv~~Ll~~~adp~i~nns~~t~ldlA~q 157 (854)
T KOG0507|consen 79 DTKGILPLHLAAWNGNLEIVKMLLLQTDI-LNAVNIENETPLHLAAQHGHLEVVFYLLKKNADPFIRNNSKETVLDLASR 157 (854)
T ss_pred hccCcceEEehhhcCcchHHHHHHhcccC-CCcccccCcCccchhhhhcchHHHHHHHhcCCCccccCcccccHHHHHHH
Confidence 56789999999999999999999999854 45788999999999999999999999999999999999999999999986
No 76
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=99.57 E-value=1e-14 Score=88.91 Aligned_cols=76 Identities=29% Similarity=0.318 Sum_probs=56.8
Q ss_pred CccHHHHHHhcCCHHHHHHHHHhCCCCccccccCCCcHHHHHHHhCCHHHHHHHHhcCcccccCCCCCccHhHHhhh
Q 035842 5 KNTTLHEAMCHGSVHVVEILSRKDPDYPYSAKNYGKMPLYMAAEKGCLEMVDVLLSTYTFMSHGSPSGKTALHAAAR 81 (82)
Q Consensus 5 g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~ 81 (82)
+-+++|.+...+...+++.++.+|.++. ..+..+.||||+|+.+|+.++|++|+++|++++.++..|.||||.|+.
T Consensus 507 ~l~~lhla~~~~~v~~~~~l~~~ga~v~-~~~~r~~TpLh~A~~~g~v~~VkfLLe~gAdv~ak~~~G~TPLH~Aa~ 582 (1143)
T KOG4177|consen 507 GLTPLHLAADEDTVKVAKILLEHGANVD-LRTGRGYTPLHVAVHYGNVDLVKFLLEHGADVNAKDKLGYTPLHQAAQ 582 (1143)
T ss_pred ccchhhhhhhhhhHHHHHHHhhcCCcee-hhcccccchHHHHHhcCCchHHHHhhhCCccccccCCCCCChhhHHHH
Confidence 3344444444444444444444444433 345578899999999999999999999999999999999999999985
No 77
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=99.55 E-value=3.9e-15 Score=88.39 Aligned_cols=80 Identities=20% Similarity=0.169 Sum_probs=73.8
Q ss_pred CCCCCccHHHHHHhcCCHHHHHHHHHhCCCCccccc-cCCCcHHHHHHHhCCHHHHHHHHhcCcccccCCCCCccHhHHh
Q 035842 1 MNNEKNTTLHEAMCHGSVHVVEILSRKDPDYPYSAK-NYGKMPLYMAAEKGCLEMVDVLLSTYTFMSHGSPSGKTALHAA 79 (82)
Q Consensus 1 ~d~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~-~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a 79 (82)
+|..|+++||+++.-+..++++||+.+|.++. .+| ..|+||||-|..+|+++|+-.|+.+|..+.++|++|..||...
T Consensus 48 kD~~GR~alH~~~S~~k~~~l~wLlqhGidv~-vqD~ESG~taLHRaiyyG~idca~lLL~~g~SL~i~Dkeglsplq~~ 126 (1267)
T KOG0783|consen 48 KDRYGRTALHIAVSENKNSFLRWLLQHGIDVF-VQDEESGYTALHRAIYYGNIDCASLLLSKGRSLRIKDKEGLSPLQFL 126 (1267)
T ss_pred HHhhccceeeeeeccchhHHHHHHHhcCceee-eccccccchHhhHhhhhchHHHHHHHHhcCCceEEecccCCCHHHHH
Confidence 47789999999999999999999999999976 554 6799999999999999999999999999999999999999987
Q ss_pred hh
Q 035842 80 AR 81 (82)
Q Consensus 80 ~~ 81 (82)
++
T Consensus 127 ~r 128 (1267)
T KOG0783|consen 127 SR 128 (1267)
T ss_pred hh
Confidence 65
No 78
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=99.54 E-value=2.9e-14 Score=81.43 Aligned_cols=72 Identities=25% Similarity=0.278 Sum_probs=63.8
Q ss_pred HHHHHhcCCHHHHHHHHHhCCCCccccccCCCcHHHHHHHhCCHHHHHHHHhcCcccccCCCCCccHhHHhhh
Q 035842 9 LHEAMCHGSVHVVEILSRKDPDYPYSAKNYGKMPLYMAAEKGCLEMVDVLLSTYTFMSHGSPSGKTALHAAAR 81 (82)
Q Consensus 9 l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~ 81 (82)
|.=|+.-|-+++++.++..-.+.. ..+..|.|+||-|+..|+.+||+||+..|+++|..|.+|+||||+|+.
T Consensus 554 LLDaaLeGEldlVq~~i~ev~DpS-qpNdEGITaLHNAiCaghyeIVkFLi~~ganVNa~DSdGWTPLHCAAS 625 (752)
T KOG0515|consen 554 LLDAALEGELDLVQRIIYEVTDPS-QPNDEGITALHNAICAGHYEIVKFLIEFGANVNAADSDGWTPLHCAAS 625 (752)
T ss_pred HHhhhhcchHHHHHHHHHhhcCCC-CCCccchhHHhhhhhcchhHHHHHHHhcCCcccCccCCCCchhhhhhh
Confidence 344777899999998887766643 678899999999999999999999999999999999999999999974
No 79
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=99.54 E-value=4.9e-14 Score=82.97 Aligned_cols=78 Identities=24% Similarity=0.302 Sum_probs=66.0
Q ss_pred CCCccHHHHHHhcCCHHHHHHHHHhCCCCccc-------cc---------------cCCCcHHHHHHHhCCHHHHHHHHh
Q 035842 3 NEKNTTLHEAMCHGSVHVVEILSRKDPDYPYS-------AK---------------NYGKMPLYMAAEKGCLEMVDVLLS 60 (82)
Q Consensus 3 ~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~-------~~---------------~~~~t~l~~a~~~~~~~~~~~l~~ 60 (82)
..|.|+||+|+.+.+.+.++.|++.|++++.. .+ ..|..||.+|+-.++.+++++|++
T Consensus 182 Y~GqSaLHiAIv~~~~~~V~lLl~~gADV~aRa~G~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eivrlLl~ 261 (782)
T KOG3676|consen 182 YYGQSALHIAIVNRDAELVRLLLAAGADVHARACGAFFCPDDQKASRKSTNYTGYFYFGEYPLSFAACTNQPEIVRLLLA 261 (782)
T ss_pred hcCcchHHHHHHhccHHHHHHHHHcCCchhhHhhccccCcccccccccccCCcceeeeccCchHHHHHcCCHHHHHHHHh
Confidence 36899999999999999999999999987411 11 137789999999999999999999
Q ss_pred cCcccccCCCCCccHhHHhh
Q 035842 61 TYTFMSHGSPSGKTALHAAA 80 (82)
Q Consensus 61 ~~~~~~~~~~~~~t~l~~a~ 80 (82)
+|++++.+|.+|+|.||..+
T Consensus 262 ~gAd~~aqDS~GNTVLH~lV 281 (782)
T KOG3676|consen 262 HGADPNAQDSNGNTVLHMLV 281 (782)
T ss_pred cCCCCCccccCCChHHHHHH
Confidence 99999999999999999754
No 80
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=99.51 E-value=2.8e-14 Score=80.87 Aligned_cols=77 Identities=25% Similarity=0.245 Sum_probs=72.0
Q ss_pred CCccHHHHHHhcCCHHHHHHHHHhCCCCccccccCCCcHHHHHHHhCCHHHHHHHHhcCcccccCCCCCccHhHHhhh
Q 035842 4 EKNTTLHEAMCHGSVHVVEILSRKDPDYPYSAKNYGKMPLYMAAEKGCLEMVDVLLSTYTFMSHGSPSGKTALHAAAR 81 (82)
Q Consensus 4 ~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~ 81 (82)
.|.|.||.|+..|..+++++|+..|..+. ..|.+||+|||.|+.=++.+.+++|+.+|++.+..+..|.+|+.++..
T Consensus 197 rG~T~lHvAaa~Gy~e~~~lLl~ag~~~~-~~D~dgWtPlHAAA~Wg~~~~~elL~~~ga~~d~~t~~g~~p~dv~de 273 (527)
T KOG0505|consen 197 RGATALHVAAANGYTEVAALLLQAGYSVN-IKDYDGWTPLHAAAHWGQEDACELLVEHGADMDAKTKMGETPLDVADE 273 (527)
T ss_pred ccchHHHHHHhhhHHHHHHHHHHhccCcc-cccccCCCcccHHHHhhhHhHHHHHHHhhcccchhhhcCCCCccchhh
Confidence 48999999999999999999999999865 789999999999999999999999999999999999999999988753
No 81
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=99.51 E-value=2.5e-14 Score=81.04 Aligned_cols=78 Identities=24% Similarity=0.312 Sum_probs=70.5
Q ss_pred CCCCccHHHHHHhcCCHHHHHHHHHhCCCCccccccCCCcHHHHHHHhCCHHHHHHHHhcCcccccCCCCCccHhHHhh
Q 035842 2 NNEKNTTLHEAMCHGSVHVVEILSRKDPDYPYSAKNYGKMPLYMAAEKGCLEMVDVLLSTYTFMSHGSPSGKTALHAAA 80 (82)
Q Consensus 2 d~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~ 80 (82)
|.+|.|+||.++...+.++++++++.|++++ .++..+|||+|.|+..++..++.+++..|+++...|..|..|+..+.
T Consensus 70 n~DglTalhq~~id~~~e~v~~l~e~ga~Vn-~~d~e~wtPlhaaascg~~~i~~~li~~gA~~~avNsdg~~P~dl~e 147 (527)
T KOG0505|consen 70 NVDGLTALHQACIDDNLEMVKFLVENGANVN-AQDNEGWTPLHAAASCGYLNIVEYLIQHGANLLAVNSDGNMPYDLAE 147 (527)
T ss_pred CCccchhHHHHHhcccHHHHHHHHHhcCCcc-ccccccCCcchhhcccccHHHHHHHHHhhhhhhhccCCCCCcccccc
Confidence 5689999999999999999999999999976 78899999999999999999999999999999999999988887653
No 82
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=99.51 E-value=4.9e-13 Score=69.29 Aligned_cols=78 Identities=28% Similarity=0.366 Sum_probs=71.0
Q ss_pred CCCccHHHHHHhcCCHHHHHHHHHhCCCCccccccCCCcHHHHHHHhCC-----HHHHHHHHhcCc---ccccCCCCCcc
Q 035842 3 NEKNTTLHEAMCHGSVHVVEILSRKDPDYPYSAKNYGKMPLYMAAEKGC-----LEMVDVLLSTYT---FMSHGSPSGKT 74 (82)
Q Consensus 3 ~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~-----~~~~~~l~~~~~---~~~~~~~~~~t 74 (82)
..+.++++.++..+...++++++..+.++ +..+..|.||+|+|+..++ .++++.|+..|+ ..+.+|..|.|
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~~~g~t 149 (235)
T COG0666 71 LDGRLPLHSAASKGDDKIVKLLLASGADV-NAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNLRDEDGNT 149 (235)
T ss_pred ccccCHHHHHHHcCcHHHHHHHHHcCCCc-ccccCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCCCccccCCCCCc
Confidence 34788999999999999999999999997 5889999999999999999 999999999999 66667999999
Q ss_pred HhHHhhh
Q 035842 75 ALHAAAR 81 (82)
Q Consensus 75 ~l~~a~~ 81 (82)
|||+|+.
T Consensus 150 pl~~A~~ 156 (235)
T COG0666 150 PLHWAAL 156 (235)
T ss_pred hhHHHHH
Confidence 9999975
No 83
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=99.48 E-value=3.9e-13 Score=76.36 Aligned_cols=74 Identities=20% Similarity=0.210 Sum_probs=68.7
Q ss_pred HHHHHHhcCCHHHHHHHHHhCCCCccccccCCCcHHHHHHHhCCHHHHHHHHhcCcccccCCCCCccHhHHhhh
Q 035842 8 TLHEAMCHGSVHVVEILSRKDPDYPYSAKNYGKMPLYMAAEKGCLEMVDVLLSTYTFMSHGSPSGKTALHAAAR 81 (82)
Q Consensus 8 ~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~ 81 (82)
.||..++.|+.+..-.|+..|++.++.-...|.||||+|+..|+...+++|+-+|++++..|.+|.||+.+|..
T Consensus 136 QLhasvRt~nlet~LRll~lGA~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYGAD~~a~d~~GmtP~~~AR~ 209 (669)
T KOG0818|consen 136 QLHSSVRTGNLETCLRLLSLGAQANFFHPEKGNTPLHVAAKAGQILQAELLAVYGADPGAQDSSGMTPVDYARQ 209 (669)
T ss_pred HHHHHhhcccHHHHHHHHHcccccCCCCcccCCchhHHHHhccchhhhhHHhhccCCCCCCCCCCCcHHHHHHh
Confidence 48899999999988889999999887778899999999999999999999999999999999999999999863
No 84
>PHA02792 ankyrin-like protein; Provisional
Probab=99.46 E-value=1.9e-13 Score=79.88 Aligned_cols=80 Identities=21% Similarity=0.122 Sum_probs=67.9
Q ss_pred CCCCccHHHHHHh-cCCHHHHHHHHHhCCCCc-----------------------------------cccccCCCcHHHH
Q 035842 2 NNEKNTTLHEAMC-HGSVHVVEILSRKDPDYP-----------------------------------YSAKNYGKMPLYM 45 (82)
Q Consensus 2 d~~g~~~l~~a~~-~~~~~~~~~ll~~~~~~~-----------------------------------~~~~~~~~t~l~~ 45 (82)
+..+.+++++|+. .++.+++++|++.|++.. +-.+..|.||||+
T Consensus 102 ~n~~~~~l~ya~~~~~~~eivk~Ll~~Gad~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~t~L~~ 181 (631)
T PHA02792 102 KNGINIVEKYATTSNPNVDVFKLLLDKGIPTCSNIQYGYKIIIEQITRAEYYNWDDELDDYDYDYTTDYDDRMGKTVLYY 181 (631)
T ss_pred cCCCCcceeEeecCCCChHHHHHHHHCCCCcccccccCcchhhhhcccccccchhhhccccccccccccCCCCCCchHHH
Confidence 4467889999966 589999999999998621 0123459999999
Q ss_pred HHHhC-------CHHHHHHHHhcCcccccCCCCCccHhHHhhh
Q 035842 46 AAEKG-------CLEMVDVLLSTYTFMSHGSPSGKTALHAAAR 81 (82)
Q Consensus 46 a~~~~-------~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~ 81 (82)
+...+ ..++++.|+++|++++.+|..|.||||+|+.
T Consensus 182 ~i~~~s~~~~~~~~~v~k~Li~~g~~~~~~d~~g~t~l~~~~~ 224 (631)
T PHA02792 182 YIITRSQDGYATSLDVINYLISHEKEMRYYTYREHTTLYYYVD 224 (631)
T ss_pred HHhhCCcccccCCHHHHHHHHhCCCCcCccCCCCChHHHHHHH
Confidence 99999 8999999999999999999999999999975
No 85
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=99.46 E-value=3.9e-13 Score=79.32 Aligned_cols=77 Identities=23% Similarity=0.183 Sum_probs=72.1
Q ss_pred CCccHHHHHHhcCCHHHHHHHHHhCCCCccccccCCCcHHHHHHHhCCHHHHHHHHhcCcc--cccCCCCCccHhHHhhh
Q 035842 4 EKNTTLHEAMCHGSVHVVEILSRKDPDYPYSAKNYGKMPLYMAAEKGCLEMVDVLLSTYTF--MSHGSPSGKTALHAAAR 81 (82)
Q Consensus 4 ~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~--~~~~~~~~~t~l~~a~~ 81 (82)
.|-.||-.||+.+..+++++|++++++++ .+|..|.|.||..+..-..++.+.+++.|++ ...+|.+|-|||.+|++
T Consensus 239 fGEyPLSfAAC~nq~eivrlLl~~gAd~~-aqDS~GNTVLH~lVi~~~~~My~~~L~~ga~~l~~v~N~qgLTPLtLAak 317 (782)
T KOG3676|consen 239 FGEYPLSFAACTNQPEIVRLLLAHGADPN-AQDSNGNTVLHMLVIHFVTEMYDLALELGANALEHVRNNQGLTPLTLAAK 317 (782)
T ss_pred eccCchHHHHHcCCHHHHHHHHhcCCCCC-ccccCCChHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCChHHHHHH
Confidence 47789999999999999999999999976 8999999999999999889999999999999 88899999999999986
No 86
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=99.41 E-value=6.1e-13 Score=79.53 Aligned_cols=77 Identities=26% Similarity=0.327 Sum_probs=64.3
Q ss_pred CCccHHHHHHhcCCHHHHHHHHHhCCCCccccccCCCcHHHHHHHhC---------CHHHHHHHHhcCccc-------cc
Q 035842 4 EKNTTLHEAMCHGSVHVVEILSRKDPDYPYSAKNYGKMPLYMAAEKG---------CLEMVDVLLSTYTFM-------SH 67 (82)
Q Consensus 4 ~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~---------~~~~~~~l~~~~~~~-------~~ 67 (82)
.|.+|||.|+..++.+++++|++.|++++ .++..|+||+|+|+..+ ...+.++++..+... +.
T Consensus 174 ~g~tpL~~Aa~~~~~~iv~lLl~~gadin-~~d~~g~T~Lh~A~~~~~~~~~~~~l~~~~~~~l~~ll~~~~~~~el~~i 252 (743)
T TIGR00870 174 HGESPLNAAACLGSPSIVALLSEDPADIL-TADSLGNTLLHLLVMENEFKAEYEELSCQMYNFALSLLDKLRDSKELEVI 252 (743)
T ss_pred ccccHHHHHHHhCCHHHHHHHhcCCcchh-hHhhhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCChHhhhhh
Confidence 58999999999999999999999998875 78899999999999886 234666676655443 55
Q ss_pred CCCCCccHhHHhhh
Q 035842 68 GSPSGKTALHAAAR 81 (82)
Q Consensus 68 ~~~~~~t~l~~a~~ 81 (82)
.|.+|.|||++|++
T Consensus 253 ~N~~g~TPL~~A~~ 266 (743)
T TIGR00870 253 LNHQGLTPLKLAAK 266 (743)
T ss_pred cCCCCCCchhhhhh
Confidence 78899999999985
No 87
>PF13606 Ank_3: Ankyrin repeat
Probab=99.34 E-value=3.6e-12 Score=47.26 Aligned_cols=26 Identities=35% Similarity=0.533 Sum_probs=13.8
Q ss_pred CccHHHHHHhcCCHHHHHHHHHhCCC
Q 035842 5 KNTTLHEAMCHGSVHVVEILSRKDPD 30 (82)
Q Consensus 5 g~~~l~~a~~~~~~~~~~~ll~~~~~ 30 (82)
|+||||+|+..|+.+++++|++.|++
T Consensus 2 G~T~Lh~A~~~g~~e~v~~Ll~~gad 27 (30)
T PF13606_consen 2 GNTPLHLAASNGNIEIVKYLLEHGAD 27 (30)
T ss_pred CCCHHHHHHHhCCHHHHHHHHHcCCC
Confidence 45555555555555555555555544
No 88
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=99.32 E-value=5.2e-12 Score=47.86 Aligned_cols=31 Identities=29% Similarity=0.443 Sum_probs=16.9
Q ss_pred CCcHHHHHHHhCCHHHHHHHHhcCcccccCC
Q 035842 39 GKMPLYMAAEKGCLEMVDVLLSTYTFMSHGS 69 (82)
Q Consensus 39 ~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~ 69 (82)
|.||||+|+..++.+++++|++.|++++.+|
T Consensus 2 G~TpLh~A~~~~~~~~v~~Ll~~ga~~~~~d 32 (33)
T PF00023_consen 2 GNTPLHYAAQRGHPDIVKLLLKHGADINARD 32 (33)
T ss_dssp SBBHHHHHHHTTCHHHHHHHHHTTSCTTCBC
T ss_pred cccHHHHHHHHHHHHHHHHHHHCcCCCCCCC
Confidence 4555555555555555555555555555443
No 89
>PF13606 Ank_3: Ankyrin repeat
Probab=99.31 E-value=6.3e-12 Score=46.62 Aligned_cols=30 Identities=33% Similarity=0.463 Sum_probs=27.7
Q ss_pred CCCcHHHHHHHhCCHHHHHHHHhcCccccc
Q 035842 38 YGKMPLYMAAEKGCLEMVDVLLSTYTFMSH 67 (82)
Q Consensus 38 ~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~ 67 (82)
.|+||||+|+..|+.+++++|++.|++++.
T Consensus 1 ~G~T~Lh~A~~~g~~e~v~~Ll~~gadvn~ 30 (30)
T PF13606_consen 1 NGNTPLHLAASNGNIEIVKYLLEHGADVNA 30 (30)
T ss_pred CCCCHHHHHHHhCCHHHHHHHHHcCCCCCC
Confidence 489999999999999999999999998863
No 90
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=99.30 E-value=2.2e-12 Score=76.07 Aligned_cols=80 Identities=28% Similarity=0.348 Sum_probs=72.7
Q ss_pred CCCCccHHHHHHhcCCHHHHHHHHHhCCCCccccccCCCcHHHHHHHhCCHHHHHHHHhcCcccccCCCCCccHhHHhhh
Q 035842 2 NNEKNTTLHEAMCHGSVHVVEILSRKDPDYPYSAKNYGKMPLYMAAEKGCLEMVDVLLSTYTFMSHGSPSGKTALHAAAR 81 (82)
Q Consensus 2 d~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~ 81 (82)
|..|.|.||.|+..|+.++.+.|+++.+-.. ..+..|.+|||+|+-.|+.++++.++..+...+..+..|.||||.|++
T Consensus 46 d~~gfTalhha~Lng~~~is~llle~ea~ld-l~d~kg~~plhlaaw~g~~e~vkmll~q~d~~na~~~e~~tplhlaaq 124 (854)
T KOG0507|consen 46 DYSGFTLLHHAVLNGQNQISKLLLDYEALLD-LCDTKGILPLHLAAWNGNLEIVKMLLLQTDILNAVNIENETPLHLAAQ 124 (854)
T ss_pred CccchhHHHHHHhcCchHHHHHHhcchhhhh-hhhccCcceEEehhhcCcchHHHHHHhcccCCCcccccCcCccchhhh
Confidence 6689999999999999999999999877654 567899999999999999999999999998889999999999999986
Q ss_pred C
Q 035842 82 E 82 (82)
Q Consensus 82 ~ 82 (82)
+
T Consensus 125 h 125 (854)
T KOG0507|consen 125 H 125 (854)
T ss_pred h
Confidence 3
No 91
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=99.23 E-value=1.1e-11 Score=70.36 Aligned_cols=76 Identities=20% Similarity=0.217 Sum_probs=68.1
Q ss_pred CCccHHHHHHhcCCHHHHHHHHHhCCCCccccccCCCcHHHHHHHhCCHHHHHHHHh-cCcccccCCCCCccHhHHhh
Q 035842 4 EKNTTLHEAMCHGSVHVVEILSRKDPDYPYSAKNYGKMPLYMAAEKGCLEMVDVLLS-TYTFMSHGSPSGKTALHAAA 80 (82)
Q Consensus 4 ~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~-~~~~~~~~~~~~~t~l~~a~ 80 (82)
++...+++|+..|+...++.+.-.|.+.. ..|...+|+||+|+..|+.+++++|++ .+.+.+.+|.+|+|||.-|.
T Consensus 505 ~~~i~~~~aa~~GD~~alrRf~l~g~D~~-~~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~~~kDRw~rtPlDdA~ 581 (622)
T KOG0506|consen 505 DTVINVMYAAKNGDLSALRRFALQGMDLE-TKDYDDRTALHVAAAEGHVEVVKFLLNACKVDPDPKDRWGRTPLDDAK 581 (622)
T ss_pred cchhhhhhhhhcCCHHHHHHHHHhccccc-ccccccchhheeecccCceeHHHHHHHHHcCCCChhhccCCCcchHhH
Confidence 34557899999999999999988898875 778999999999999999999999999 58999999999999998764
No 92
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=99.21 E-value=6.7e-11 Score=44.75 Aligned_cols=29 Identities=31% Similarity=0.454 Sum_probs=27.2
Q ss_pred CCccHHHHHHhcCCHHHHHHHHHhCCCCc
Q 035842 4 EKNTTLHEAMCHGSVHVVEILSRKDPDYP 32 (82)
Q Consensus 4 ~g~~~l~~a~~~~~~~~~~~ll~~~~~~~ 32 (82)
+|.||||+|+..|+.+++++|++.|+++.
T Consensus 1 dG~TpLh~A~~~~~~~~v~~Ll~~ga~~~ 29 (33)
T PF00023_consen 1 DGNTPLHYAAQRGHPDIVKLLLKHGADIN 29 (33)
T ss_dssp TSBBHHHHHHHTTCHHHHHHHHHTTSCTT
T ss_pred CcccHHHHHHHHHHHHHHHHHHHCcCCCC
Confidence 58999999999999999999999999875
No 93
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=99.16 E-value=1.4e-10 Score=67.23 Aligned_cols=63 Identities=27% Similarity=0.321 Sum_probs=52.4
Q ss_pred CCCCccHHHHHHhcCCHHHHHHHHHhCCCCccccccCCCcHHHHHHHhCCHHHHHHHHhcCccc
Q 035842 2 NNEKNTTLHEAMCHGSVHVVEILSRKDPDYPYSAKNYGKMPLYMAAEKGCLEMVDVLLSTYTFM 65 (82)
Q Consensus 2 d~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~ 65 (82)
+.+|+|+||.||+.|+..+.++|+.+|.++. ..|.+|.|+|.+|-+.|.-+|++.|+.+|.+-
T Consensus 658 ~~~grt~LHLa~~~gnVvl~QLLiWyg~dv~-~rda~g~t~l~yar~a~sqec~d~llq~gcp~ 720 (749)
T KOG0705|consen 658 EGDGRTALHLAARKGNVVLAQLLIWYGVDVM-ARDAHGRTALFYARQAGSQECIDVLLQYGCPD 720 (749)
T ss_pred CCCCcchhhhhhhhcchhHHHHHHHhCccce-ecccCCchhhhhHhhcccHHHHHHHHHcCCCc
Confidence 3467889999998898888888888888865 67888889999988888888888888877654
No 94
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=99.10 E-value=1.4e-10 Score=67.60 Aligned_cols=78 Identities=21% Similarity=0.219 Sum_probs=68.6
Q ss_pred CCCCccHHHHHHhcCCHHHHHHHHHhCCC-CccccccCCCcHHHHHHHhCCHHHHHHHHhcCcccccCCCCCccHhHHh
Q 035842 2 NNEKNTTLHEAMCHGSVHVVEILSRKDPD-YPYSAKNYGKMPLYMAAEKGCLEMVDVLLSTYTFMSHGSPSGKTALHAA 79 (82)
Q Consensus 2 d~~g~~~l~~a~~~~~~~~~~~ll~~~~~-~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a 79 (82)
+.+..+.||+|+..|+-+++++++.+++. +....+..|.|+||-|+..++..++.+|+..|+.+...|..|.||-.-|
T Consensus 896 ~~~~~sllh~a~~tg~~eivkyildh~p~elld~~de~get~lhkaa~~~~r~vc~~lvdagasl~ktd~kg~tp~era 974 (1004)
T KOG0782|consen 896 GPDHCSLLHYAAKTGNGEIVKYILDHGPSELLDMADETGETALHKAACQRNRAVCQLLVDAGASLRKTDSKGKTPQERA 974 (1004)
T ss_pred CcchhhHHHHHHhcCChHHHHHHHhcCCHHHHHHHhhhhhHHHHHHHHhcchHHHHHHHhcchhheecccCCCChHHHH
Confidence 45677899999999999999999999874 3345678999999999999999999999999999999999999996544
No 95
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=99.09 E-value=9.2e-10 Score=59.61 Aligned_cols=74 Identities=24% Similarity=0.145 Sum_probs=64.2
Q ss_pred ccHHHHHHhcCCHHHHHHHHHhCCCCccccccCCCcHHHHHHHhCCHHHHHHHHhcCcccccC-CCCCccHhHHhh
Q 035842 6 NTTLHEAMCHGSVHVVEILSRKDPDYPYSAKNYGKMPLYMAAEKGCLEMVDVLLSTYTFMSHG-SPSGKTALHAAA 80 (82)
Q Consensus 6 ~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~-~~~~~t~l~~a~ 80 (82)
..+|+.+.-+++.+-+..|++.-..++ ..|..|.++|..|+..|..++++.+++.|+++|.. +..+-||||.|+
T Consensus 13 ~~~Lle~i~Kndt~~a~~LLs~vr~vn-~~D~sGMs~LahAaykGnl~~v~lll~~gaDvN~~qhg~~YTpLmFAA 87 (396)
T KOG1710|consen 13 KSPLLEAIDKNDTEAALALLSTVRQVN-QRDPSGMSVLAHAAYKGNLTLVELLLELGADVNDKQHGTLYTPLMFAA 87 (396)
T ss_pred hhHHHHHHccCcHHHHHHHHHHhhhhh-ccCCCcccHHHHHHhcCcHHHHHHHHHhCCCcCcccccccccHHHHHH
Confidence 458999999999998888888754444 67899999999999999999999999999999864 667889999987
No 96
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.01 E-value=2.5e-09 Score=61.50 Aligned_cols=72 Identities=25% Similarity=0.217 Sum_probs=43.3
Q ss_pred HHHHHHhcCCHHHHHHHHHhC--CCCccccccCCCcHHHHHHHhCCHHHHHHHHhcCcccccCCCCCccHhHHhh
Q 035842 8 TLHEAMCHGSVHVVEILSRKD--PDYPYSAKNYGKMPLYMAAEKGCLEMVDVLLSTYTFMSHGSPSGKTALHAAA 80 (82)
Q Consensus 8 ~l~~a~~~~~~~~~~~ll~~~--~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~ 80 (82)
|+|+++.....+-+...+... ..+ ...|..|.||||+|+..|+...+..|+..|+++..+|.+|++|||-|+
T Consensus 23 ~lh~~~~~~~~~sl~~el~~~~~~~i-d~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Adv~~kN~~gWs~L~EAv 96 (560)
T KOG0522|consen 23 PLHWAVVTTDSDSLEQELLAKVSLVI-DRRDPPGRTPLHLAVRLGHVEAARILLSAGADVSIKNNEGWSPLHEAV 96 (560)
T ss_pred ccchhhhccchhhHHHHHhhhhhcee-ccccCCCCccHHHHHHhcCHHHHHHHHhcCCCccccccccccHHHHHH
Confidence 466666665554433322221 122 234556677777777777777777777777777777777777777665
No 97
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=98.98 E-value=1.8e-10 Score=71.35 Aligned_cols=79 Identities=23% Similarity=0.212 Sum_probs=59.5
Q ss_pred CCCCccHHHHHHhcCCHHHHHHHHHhCCCCccccccCCCcHHHHHHHhCCHHHHHHHHhcCcccccCCCCCccHhHHhh
Q 035842 2 NNEKNTTLHEAMCHGSVHVVEILSRKDPDYPYSAKNYGKMPLYMAAEKGCLEMVDVLLSTYTFMSHGSPSGKTALHAAA 80 (82)
Q Consensus 2 d~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~ 80 (82)
|+.|.+||.+|+..|+..+++.|++..+++....|+.+.|+|.++|..|+.+++++|+..|++-..++....|||.+|.
T Consensus 787 dkkgf~plImaatagh~tvV~~llk~ha~veaQsdrtkdt~lSlacsggr~~vvelLl~~gankehrnvsDytPlsla~ 865 (2131)
T KOG4369|consen 787 DKKGFVPLIMAATAGHITVVQDLLKAHADVEAQSDRTKDTMLSLACSGGRTRVVELLLNAGANKEHRNVSDYTPLSLAR 865 (2131)
T ss_pred ccccchhhhhhcccCchHHHHHHHhhhhhhhhhcccccCceEEEecCCCcchHHHHHHHhhccccccchhhcCchhhhc
Confidence 5677778888877777777777777777766556677777777777777777777777777777777777777777664
No 98
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.97 E-value=2.7e-09 Score=61.37 Aligned_cols=59 Identities=27% Similarity=0.302 Sum_probs=53.3
Q ss_pred CCCCCccHHHHHHhcCCHHHHHHHHHhCCCCccccccCCCcHHHHHHHhCCHHHHHHHHh
Q 035842 1 MNNEKNTTLHEAMCHGSVHVVEILSRKDPDYPYSAKNYGKMPLYMAAEKGCLEMVDVLLS 60 (82)
Q Consensus 1 ~d~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~ 60 (82)
.|..|.||||.|+..|+...++.|+..++++. .++..||+|||-|+..|..+++..++.
T Consensus 51 ~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Adv~-~kN~~gWs~L~EAv~~g~~q~i~~vlr 109 (560)
T KOG0522|consen 51 RDPPGRTPLHLAVRLGHVEAARILLSAGADVS-IKNNEGWSPLHEAVSTGNEQIITEVLR 109 (560)
T ss_pred ccCCCCccHHHHHHhcCHHHHHHHHhcCCCcc-ccccccccHHHHHHHcCCHHHHHHHHH
Confidence 36789999999999999999999999999865 789999999999999999988777766
No 99
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=98.94 E-value=1.5e-09 Score=65.49 Aligned_cols=77 Identities=26% Similarity=0.289 Sum_probs=71.7
Q ss_pred CCccHHHHHHhcCCHHHHHHHHHhCCCCccccccCCCcHHHHHHHhCCHHHHHHHHhcCcccccCCCCCccHhHHhhh
Q 035842 4 EKNTTLHEAMCHGSVHVVEILSRKDPDYPYSAKNYGKMPLYMAAEKGCLEMVDVLLSTYTFMSHGSPSGKTALHAAAR 81 (82)
Q Consensus 4 ~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~ 81 (82)
.|.+++|.|+..+.....++|+..|++++ ..+..|.+|+|.+...|+...+..++.+|++.++.+..|.+|+.+|..
T Consensus 655 ~~~s~lh~a~~~~~~~~~e~ll~~ga~vn-~~d~~g~~plh~~~~~g~~~~~~~ll~~~a~~~a~~~~~~~~l~~a~~ 731 (785)
T KOG0521|consen 655 IGCSLLHVAVGTGDSGAVELLLQNGADVN-ALDSKGRTPLHHATASGHTSIACLLLKRGADPNAFDPDGKLPLDIAME 731 (785)
T ss_pred cccchhhhhhccchHHHHHHHHhcCCcch-hhhccCCCcchhhhhhcccchhhhhccccccccccCccCcchhhHHhh
Confidence 57899999999999999999999999965 789999999999999999999999999999999999999999998853
No 100
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=98.91 E-value=5.5e-09 Score=60.92 Aligned_cols=73 Identities=21% Similarity=0.222 Sum_probs=60.4
Q ss_pred HHHHHhcCCHHHHHHHHHhCCCCc--c-ccccCCCcHHHHHHHhCCHHHHHHHHhcCcccccCCCCCccHhHHhhh
Q 035842 9 LHEAMCHGSVHVVEILSRKDPDYP--Y-SAKNYGKMPLYMAAEKGCLEMVDVLLSTYTFMSHGSPSGKTALHAAAR 81 (82)
Q Consensus 9 l~~a~~~~~~~~~~~ll~~~~~~~--~-~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~ 81 (82)
|.-|+...+...+-+|+.+|.... . ..+..|+|+||+|++.|+..+.++|+=+|+++..+|.+|.|+|.||.+
T Consensus 628 Ll~A~~~~Dl~t~~lLLAhg~~~e~~~t~~~~~grt~LHLa~~~gnVvl~QLLiWyg~dv~~rda~g~t~l~yar~ 703 (749)
T KOG0705|consen 628 LLRAVAAEDLQTAILLLAHGSREEVNETCGEGDGRTALHLAARKGNVVLAQLLIWYGVDVMARDAHGRTALFYARQ 703 (749)
T ss_pred HHHHHHHHHHHHHHHHHhccCchhhhccccCCCCcchhhhhhhhcchhHHHHHHHhCccceecccCCchhhhhHhh
Confidence 455666677888888999876532 1 124568999999999999999999999999999999999999999864
No 101
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.91 E-value=1.3e-08 Score=57.06 Aligned_cols=68 Identities=25% Similarity=0.341 Sum_probs=59.2
Q ss_pred HHHHHHhcCCHHHHHHHHHhCCCCccccccCCCcHHHHHHHhCCHHHHHHHHhcCcccccCCCCCccHh
Q 035842 8 TLHEAMCHGSVHVVEILSRKDPDYPYSAKNYGKMPLYMAAEKGCLEMVDVLLSTYTFMSHGSPSGKTAL 76 (82)
Q Consensus 8 ~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l 76 (82)
.|..||+.|+.+.++.|++.|.+++ ..|....+||.+|+.-||.+++++|+++|+--..-..+|..++
T Consensus 39 elceacR~GD~d~v~~LVetgvnVN-~vD~fD~spL~lAsLcGHe~vvklLLenGAiC~rdtf~G~RC~ 106 (516)
T KOG0511|consen 39 ELCEACRAGDVDRVRYLVETGVNVN-AVDRFDSSPLYLASLCGHEDVVKLLLENGAICSRDTFDGDRCH 106 (516)
T ss_pred HHHHHhhcccHHHHHHHHHhCCCcc-hhhcccccHHHHHHHcCcHHHHHHHHHcCCcccccccCcchhh
Confidence 4788999999999999999999976 7899999999999999999999999999987665455665543
No 102
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=98.76 E-value=7.1e-08 Score=49.58 Aligned_cols=65 Identities=20% Similarity=0.097 Sum_probs=55.7
Q ss_pred CCCCccHHHHHHhcCCHHHHHHHHHhC-CCCccccccCCCcHHHHHHHhCCHHHHHHHHhcCccccc
Q 035842 2 NNEKNTTLHEAMCHGSVHVVEILSRKD-PDYPYSAKNYGKMPLYMAAEKGCLEMVDVLLSTYTFMSH 67 (82)
Q Consensus 2 d~~g~~~l~~a~~~~~~~~~~~ll~~~-~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~ 67 (82)
|..|||+++.|+.-|+.+.+.+|+.+| +.+. ..+.++.+.+-+|-..|..+++..|.+.-.+-..
T Consensus 9 D~fgWTalmcaa~eg~~eavsyllgrg~a~vg-v~d~ssldaaqlaek~g~~~fvh~lfe~~~ets~ 74 (223)
T KOG2384|consen 9 DAFGWTALMCAAMEGSNEAVSYLLGRGVAFVG-VTDESSLDAAQLAEKGGAQAFVHSLFENDRETSH 74 (223)
T ss_pred hhhcchHHHHHhhhcchhHHHHHhccCccccc-ccccccchHHHHHHhcChHHHHHHHHHHhccCCC
Confidence 678999999999999999999999999 5544 7789999999999999999999999885433333
No 103
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=98.76 E-value=4.2e-08 Score=56.60 Aligned_cols=57 Identities=26% Similarity=0.343 Sum_probs=50.3
Q ss_pred CCCccHHHHHHhcCCHHHHHHHHHhCCCCccccccCCCcHHHHHHHhCCHHHHHHHHh
Q 035842 3 NEKNTTLHEAMCHGSVHVVEILSRKDPDYPYSAKNYGKMPLYMAAEKGCLEMVDVLLS 60 (82)
Q Consensus 3 ~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~ 60 (82)
+.|.||||.|+..|..--+++|+-+|+++. .+|..|.||+.+|-..|+-++.+-|++
T Consensus 165 ekg~TpLHvAAk~Gq~~Q~ElL~vYGAD~~-a~d~~GmtP~~~AR~~gH~~laeRl~e 221 (669)
T KOG0818|consen 165 EKGNTPLHVAAKAGQILQAELLAVYGADPG-AQDSSGMTPVDYARQGGHHELAERLVE 221 (669)
T ss_pred ccCCchhHHHHhccchhhhhHHhhccCCCC-CCCCCCCcHHHHHHhcCchHHHHHHHH
Confidence 468999999999999988999999999986 889999999999999999877655544
No 104
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=98.69 E-value=1.7e-08 Score=57.82 Aligned_cols=61 Identities=28% Similarity=0.329 Sum_probs=53.8
Q ss_pred CCCCCccHHHHHHhcCCHHHHHHHHHhCCCCccccccCCCcHHHHHHHhCCHHHHHHHHhc
Q 035842 1 MNNEKNTTLHEAMCHGSVHVVEILSRKDPDYPYSAKNYGKMPLYMAAEKGCLEMVDVLLST 61 (82)
Q Consensus 1 ~d~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~ 61 (82)
.|.+.+|+||.|+.-|+.+++++|+..-.......|+.|.|||--|...++.+++++|-+.
T Consensus 535 ~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~~~kDRw~rtPlDdA~~F~h~~v~k~L~~~ 595 (622)
T KOG0506|consen 535 KDYDDRTALHVAAAEGHVEVVKFLLNACKVDPDPKDRWGRTPLDDAKHFKHKEVVKLLEEA 595 (622)
T ss_pred cccccchhheeecccCceeHHHHHHHHHcCCCChhhccCCCcchHhHhcCcHHHHHHHHHH
Confidence 4778999999999999999999999874443457899999999999999999999999874
No 105
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=98.63 E-value=2.3e-08 Score=62.54 Aligned_cols=78 Identities=22% Similarity=0.166 Sum_probs=66.3
Q ss_pred CCCccHHHHHHhcCCHHHHHHHHHhCCCCccccccCCCcHHHHHHHhCCHHHHHHHHhcCcccccCCCCCccHhHHhh
Q 035842 3 NEKNTTLHEAMCHGSVHVVEILSRKDPDYPYSAKNYGKMPLYMAAEKGCLEMVDVLLSTYTFMSHGSPSGKTALHAAA 80 (82)
Q Consensus 3 ~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~ 80 (82)
+.|..||+.+...|+.+.++.|++.|.+++.....+-.|+|.+|+..|..+++.+|+.+.+++..+-+.|.|||+-++
T Consensus 890 klgisPLmlatmngh~~at~~ll~~gsdiNaqIeTNrnTaltla~fqgr~evv~lLLa~~anvehRaktgltplme~A 967 (2131)
T KOG4369|consen 890 KLGISPLMLATMNGHQAATLSLLQPGSDINAQIETNRNTALTLALFQGRPEVVFLLLAAQANVEHRAKTGLTPLMEMA 967 (2131)
T ss_pred ccCcchhhhhhhccccHHHHHHhcccchhccccccccccceeeccccCcchHHHHHHHHhhhhhhhcccCCcccchhh
Confidence 457788999999999998888999988887555667788999999999999999999988888888888999988665
No 106
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.27 E-value=2.2e-06 Score=49.75 Aligned_cols=63 Identities=19% Similarity=0.125 Sum_probs=49.9
Q ss_pred HHHHHHHHHhCCCCcc-----ccccCCCcHHHHHHHhCCHHHHHHHHhcCcccccCCCCCccHhHHhh
Q 035842 18 VHVVEILSRKDPDYPY-----SAKNYGKMPLYMAAEKGCLEMVDVLLSTYTFMSHGSPSGKTALHAAA 80 (82)
Q Consensus 18 ~~~~~~ll~~~~~~~~-----~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~ 80 (82)
...+++|.+++...+. ..+....|+||+|+..|..+++.+|++.|.+...+|..|.||..++.
T Consensus 404 p~~ie~lken~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Leeg~Dp~~kd~~Grtpy~ls~ 471 (591)
T KOG2505|consen 404 PDSIEALKENLLSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFLEEGCDPSTKDGAGRTPYSLSA 471 (591)
T ss_pred hhHHHHHHhcCCcccccccccccccccchHHHHHHhcchHHHHHHHHHhcCCchhcccCCCCcccccc
Confidence 4456777777655431 12334668999999999999999999999999999999999998875
No 107
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=98.20 E-value=9.6e-07 Score=54.53 Aligned_cols=75 Identities=16% Similarity=0.003 Sum_probs=33.0
Q ss_pred CCccHHHHHHhcCCHHHHHHHHHh-CCCCccccccCCCcHHHHHHHhCCHHHHHHHHh-cCcccccCCCCCccHhHHhh
Q 035842 4 EKNTTLHEAMCHGSVHVVEILSRK-DPDYPYSAKNYGKMPLYMAAEKGCLEMVDVLLS-TYTFMSHGSPSGKTALHAAA 80 (82)
Q Consensus 4 ~g~~~l~~a~~~~~~~~~~~ll~~-~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~-~~~~~~~~~~~~~t~l~~a~ 80 (82)
.|++.+|.++..+..-+++.+++- +... ...+..|...+|+| ..+..+..-+++. .|..++++|.+|+||||||+
T Consensus 573 r~~lllhL~a~~lyawLie~~~e~~~~~~-~eld~d~qgV~hfc-a~lg~ewA~ll~~~~~~ai~i~D~~G~tpL~wAa 649 (975)
T KOG0520|consen 573 RDMLLLHLLAELLYAWLIEKVIEWAGSGD-LELDRDGQGVIHFC-AALGYEWAFLPISADGVAIDIRDRNGWTPLHWAA 649 (975)
T ss_pred cchHHHHHHHHHhHHHHHHHHhcccccCc-hhhcccCCChhhHh-hhcCCceeEEEEeecccccccccCCCCcccchHh
Confidence 466666666666655555555553 2221 12333344444442 2222222222222 34444445555555555544
No 108
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=98.15 E-value=9.6e-07 Score=54.14 Aligned_cols=63 Identities=21% Similarity=0.184 Sum_probs=51.9
Q ss_pred HHHHHHHHhCCCCccccccCCCcHHHHHHHhCCHHHHHHHHhcCcccccCCC-CCccHhHHhhh
Q 035842 19 HVVEILSRKDPDYPYSAKNYGKMPLYMAAEKGCLEMVDVLLSTYTFMSHGSP-SGKTALHAAAR 81 (82)
Q Consensus 19 ~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~-~~~t~l~~a~~ 81 (82)
++..++-+.+.+..+..|..|+++||+++..+..+++++|+.+|+++..+|. .|.||||=|..
T Consensus 32 qlk~F~~k~c~n~anikD~~GR~alH~~~S~~k~~~l~wLlqhGidv~vqD~ESG~taLHRaiy 95 (1267)
T KOG0783|consen 32 QLKGFSEKSCQNLANIKDRYGRTALHIAVSENKNSFLRWLLQHGIDVFVQDEESGYTALHRAIY 95 (1267)
T ss_pred HHHHHHHHhhhhhhhHHHhhccceeeeeeccchhHHHHHHHhcCceeeeccccccchHhhHhhh
Confidence 3444555555555556789999999999999999999999999999999988 59999997753
No 109
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=98.10 E-value=1.2e-05 Score=28.08 Aligned_cols=25 Identities=36% Similarity=0.462 Sum_probs=12.6
Q ss_pred CccHHHHHHhcCCHHHHHHHHHhCC
Q 035842 5 KNTTLHEAMCHGSVHVVEILSRKDP 29 (82)
Q Consensus 5 g~~~l~~a~~~~~~~~~~~ll~~~~ 29 (82)
|.+++|+++..++.++++.++..+.
T Consensus 2 ~~~~l~~~~~~~~~~~~~~ll~~~~ 26 (30)
T smart00248 2 GRTPLHLAAENGNLEVVKLLLDKGA 26 (30)
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 3445555555555555555554443
No 110
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=98.06 E-value=1.9e-05 Score=27.54 Aligned_cols=29 Identities=41% Similarity=0.588 Sum_probs=25.1
Q ss_pred CCCcHHHHHHHhCCHHHHHHHHhcCcccc
Q 035842 38 YGKMPLYMAAEKGCLEMVDVLLSTYTFMS 66 (82)
Q Consensus 38 ~~~t~l~~a~~~~~~~~~~~l~~~~~~~~ 66 (82)
.+.+|+++++..++.++++.++..+.+++
T Consensus 1 ~~~~~l~~~~~~~~~~~~~~ll~~~~~~~ 29 (30)
T smart00248 1 DGRTPLHLAAENGNLEVVKLLLDKGADIN 29 (30)
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 36799999999999999999999877553
No 111
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=98.05 E-value=1.4e-05 Score=41.39 Aligned_cols=48 Identities=27% Similarity=0.296 Sum_probs=44.1
Q ss_pred ccccCCCcHHHHHHHhCCHHHHHHHHhcC-cccccCCCCCccHhHHhhh
Q 035842 34 SAKNYGKMPLYMAAEKGCLEMVDVLLSTY-TFMSHGSPSGKTALHAAAR 81 (82)
Q Consensus 34 ~~~~~~~t~l~~a~~~~~~~~~~~l~~~~-~~~~~~~~~~~t~l~~a~~ 81 (82)
..|..|||+++-|+..|..+.+.+|+.+| +.+...|..+.++..+|-+
T Consensus 7 ~rD~fgWTalmcaa~eg~~eavsyllgrg~a~vgv~d~ssldaaqlaek 55 (223)
T KOG2384|consen 7 ARDAFGWTALMCAAMEGSNEAVSYLLGRGVAFVGVTDESSLDAAQLAEK 55 (223)
T ss_pred chhhhcchHHHHHhhhcchhHHHHHhccCcccccccccccchHHHHHHh
Confidence 67899999999999999999999999999 8888999999999988754
No 112
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=98.02 E-value=1.8e-05 Score=48.47 Aligned_cols=63 Identities=25% Similarity=0.214 Sum_probs=41.9
Q ss_pred HHHHHHhcCCHHHHHHHHHhCCCC---------ccccccCCCcHHHHHHHhCCHHHHHHHHhcCcccccCCC
Q 035842 8 TLHEAMCHGSVHVVEILSRKDPDY---------PYSAKNYGKMPLYMAAEKGCLEMVDVLLSTYTFMSHGSP 70 (82)
Q Consensus 8 ~l~~a~~~~~~~~~~~ll~~~~~~---------~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~ 70 (82)
+|.+|+..|..+.++.++.+.... +...-..+.||+.+|+..++.+|+++|+.+|+.+..+..
T Consensus 91 ALL~aI~~~~v~~VE~ll~~~~~~~~~~~~~d~~~~~ft~ditPliLAAh~NnyEil~~Ll~kg~~i~~PH~ 162 (822)
T KOG3609|consen 91 ALLLAIAVGSVPLVELLLVHFVDAPYLERSGDANSPHFTPDITPLMLAAHLNNFEILQCLLTRGHCIPIPHD 162 (822)
T ss_pred HHHHHHHHHHHHHHHHHHhcccccchhccccccCcccCCCCccHHHHHHHhcchHHHHHHHHcCCCCCCCcc
Confidence 455555555556566555542221 001112477999999999999999999999988766543
No 113
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=97.77 E-value=8e-05 Score=44.57 Aligned_cols=71 Identities=21% Similarity=0.150 Sum_probs=53.7
Q ss_pred HHHHHhcCCHHHHHHHHHhCCCCccccccCCCcHHHHHHHhCCHHHHHHHHhcCcc--cccCCCCCccHhHHhh
Q 035842 9 LHEAMCHGSVHVVEILSRKDPDYPYSAKNYGKMPLYMAAEKGCLEMVDVLLSTYTF--MSHGSPSGKTALHAAA 80 (82)
Q Consensus 9 l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~--~~~~~~~~~t~l~~a~ 80 (82)
+..|+..+++--++..-..|.+.. .++.+-.+-||+|+..|..+++++++.+|.. ++..+..|.|+||-|+
T Consensus 870 il~av~~~D~~klqE~h~~gg~ll-~~~~~~~sllh~a~~tg~~eivkyildh~p~elld~~de~get~lhkaa 942 (1004)
T KOG0782|consen 870 ILRAVLSSDLMKLQETHLNGGSLL-IQGPDHCSLLHYAAKTGNGEIVKYILDHGPSELLDMADETGETALHKAA 942 (1004)
T ss_pred HHHHHHhccHHHHHHHHhcCCceE-eeCcchhhHHHHHHhcCChHHHHHHHhcCCHHHHHHHhhhhhHHHHHHH
Confidence 455666666554554555566543 5677778899999999999999999998743 5667889999999775
No 114
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=97.73 E-value=2e-05 Score=49.04 Aligned_cols=76 Identities=20% Similarity=0.131 Sum_probs=45.7
Q ss_pred CCCCccHHHHHHhcCCHHHHHHHH-HhCCCCccccccCCCcHHHHHHHhCCHHHHHHHHhcCccccc------CCCCCcc
Q 035842 2 NNEKNTTLHEAMCHGSVHVVEILS-RKDPDYPYSAKNYGKMPLYMAAEKGCLEMVDVLLSTYTFMSH------GSPSGKT 74 (82)
Q Consensus 2 d~~g~~~l~~a~~~~~~~~~~~ll-~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~------~~~~~~t 74 (82)
|.+|.-.+|. |..+..++.-+++ ..|..++ ..|..||||||||+.+|+..++..|.+.|+.... .+..|.|
T Consensus 605 d~d~qgV~hf-ca~lg~ewA~ll~~~~~~ai~-i~D~~G~tpL~wAa~~G~e~l~a~l~~lga~~~~~tdps~~~p~g~t 682 (975)
T KOG0520|consen 605 DRDGQGVIHF-CAALGYEWAFLPISADGVAID-IRDRNGWTPLHWAAFRGREKLVASLIELGADPGAVTDPSPETPGGKT 682 (975)
T ss_pred cccCCChhhH-hhhcCCceeEEEEeecccccc-cccCCCCcccchHhhcCHHHHHHHHHHhccccccccCCCCCCCCCCc
Confidence 3444445666 3344455444333 3344433 6788899999999999998888888875554332 2334555
Q ss_pred HhHHh
Q 035842 75 ALHAA 79 (82)
Q Consensus 75 ~l~~a 79 (82)
+-.+|
T Consensus 683 a~~la 687 (975)
T KOG0520|consen 683 AADLA 687 (975)
T ss_pred hhhhh
Confidence 55544
No 115
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=97.66 E-value=0.00011 Score=43.04 Aligned_cols=45 Identities=22% Similarity=0.297 Sum_probs=39.3
Q ss_pred CCCccHHHHHHhcCCHHHHHHHHHhCCCCccccccCCCcHHHHHHH
Q 035842 3 NEKNTTLHEAMCHGSVHVVEILSRKDPDYPYSAKNYGKMPLYMAAE 48 (82)
Q Consensus 3 ~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~ 48 (82)
.--.|+||+|+..|..+++..+|..+++.. ..|..|.||+.++..
T Consensus 428 ~ltsT~LH~aa~qg~~k~v~~~Leeg~Dp~-~kd~~Grtpy~ls~n 472 (591)
T KOG2505|consen 428 YLTSTFLHYAAAQGARKCVKYFLEEGCDPS-TKDGAGRTPYSLSAN 472 (591)
T ss_pred cccchHHHHHHhcchHHHHHHHHHhcCCch-hcccCCCCccccccc
Confidence 345789999999999999999999998854 789999999998763
No 116
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=97.61 E-value=6.9e-05 Score=46.28 Aligned_cols=45 Identities=27% Similarity=0.248 Sum_probs=41.8
Q ss_pred cCCCcHHHHHHHhCCHHHHHHHHhcCcccccCCCCCccHhHHhhh
Q 035842 37 NYGKMPLYMAAEKGCLEMVDVLLSTYTFMSHGSPSGKTALHAAAR 81 (82)
Q Consensus 37 ~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~ 81 (82)
..|.+++|.++..+....+++|+..|++++..|..|++|+|.+..
T Consensus 654 ~~~~s~lh~a~~~~~~~~~e~ll~~ga~vn~~d~~g~~plh~~~~ 698 (785)
T KOG0521|consen 654 CIGCSLLHVAVGTGDSGAVELLLQNGADVNALDSKGRTPLHHATA 698 (785)
T ss_pred hcccchhhhhhccchHHHHHHHHhcCCcchhhhccCCCcchhhhh
Confidence 468999999999999999999999999999999999999998754
No 117
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=97.11 E-value=0.00098 Score=38.29 Aligned_cols=41 Identities=20% Similarity=0.067 Sum_probs=37.4
Q ss_pred CcHHHHHHHhCCHHHHHHHHhcCcccccCCCCCccHhHHhh
Q 035842 40 KMPLYMAAEKGCLEMVDVLLSTYTFMSHGSPSGKTALHAAA 80 (82)
Q Consensus 40 ~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~ 80 (82)
.--|..||+.|..+.++.|++.|.++|..|.....||-+|+
T Consensus 37 f~elceacR~GD~d~v~~LVetgvnVN~vD~fD~spL~lAs 77 (516)
T KOG0511|consen 37 FGELCEACRAGDVDRVRYLVETGVNVNAVDRFDSSPLYLAS 77 (516)
T ss_pred hHHHHHHhhcccHHHHHHHHHhCCCcchhhcccccHHHHHH
Confidence 34578899999999999999999999999999999999885
No 118
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=94.32 E-value=0.092 Score=33.31 Aligned_cols=29 Identities=17% Similarity=0.147 Sum_probs=26.6
Q ss_pred CCccHHHHHHhcCCHHHHHHHHHhCCCCc
Q 035842 4 EKNTTLHEAMCHGSVHVVEILSRKDPDYP 32 (82)
Q Consensus 4 ~g~~~l~~a~~~~~~~~~~~ll~~~~~~~ 32 (82)
.+.||+..||..++.|+++.|++.|..+.
T Consensus 130 ~ditPliLAAh~NnyEil~~Ll~kg~~i~ 158 (822)
T KOG3609|consen 130 PDITPLMLAAHLNNFEILQCLLTRGHCIP 158 (822)
T ss_pred CCccHHHHHHHhcchHHHHHHHHcCCCCC
Confidence 46799999999999999999999998875
No 119
>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].
Probab=94.00 E-value=0.25 Score=21.94 Aligned_cols=47 Identities=23% Similarity=0.270 Sum_probs=38.0
Q ss_pred cHHHHHHhcCCHHHHHHHHHhCCCCccccccCCCcHHHHHHHhCCHHHHHHHHhc
Q 035842 7 TTLHEAMCHGSVHVVEILSRKDPDYPYSAKNYGKMPLYMAAEKGCLEMVDVLLST 61 (82)
Q Consensus 7 ~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~ 61 (82)
..+..|+..|+.++++.+++.+.. + ...+..|....+-+++++|++.
T Consensus 8 ~tl~~Ai~GGN~eII~~c~~~~~~-----~---~~~l~~AI~~H~n~i~~~l~~~ 54 (76)
T PF11929_consen 8 KTLEYAIIGGNFEIINICLKKNKP-----D---NDCLEYAIKSHNNEIADWLIEN 54 (76)
T ss_pred HHHHHHHhCCCHHHHHHHHHHhcc-----H---HHHHHHHHHHhhHHHHHHHHHh
Confidence 457889999999999998865521 1 2468899999999999999884
No 120
>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses. These proteins may be involved in promoting survival of infected macrophages [].
Probab=92.77 E-value=0.63 Score=24.63 Aligned_cols=44 Identities=16% Similarity=0.154 Sum_probs=24.5
Q ss_pred HHHHHhcCCHHHHHHHHHhCCCCccccccCCCcHHHHHHHhCCHHHHHHHH
Q 035842 9 LHEAMCHGSVHVVEILSRKDPDYPYSAKNYGKMPLYMAAEKGCLEMVDVLL 59 (82)
Q Consensus 9 l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~ 59 (82)
|..|+.+|-...+...+++|.++. . +.|..|+..++.+++.+++
T Consensus 147 l~~a~~kgll~F~letlkygg~~~-~------~vls~Av~ynhRkIL~yfi 190 (192)
T PF03158_consen 147 LEKAAAKGLLPFVLETLKYGGNVD-I------IVLSQAVKYNHRKILDYFI 190 (192)
T ss_pred HHHHHHCCCHHHHHHHHHcCCccc-H------HHHHHHHHhhHHHHHHHhh
Confidence 345556666665555555555432 0 4566666666666665554
No 121
>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=89.38 E-value=2 Score=23.77 Aligned_cols=49 Identities=22% Similarity=0.141 Sum_probs=32.1
Q ss_pred CHHHHHHHHHhCCCCc---cccccCCCcHHHHHHHhCCHHHHHHHHhcCccc
Q 035842 17 SVHVVEILSRKDPDYP---YSAKNYGKMPLYMAAEKGCLEMVDVLLSTYTFM 65 (82)
Q Consensus 17 ~~~~~~~ll~~~~~~~---~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~ 65 (82)
+..++++++..|-... ......|.|-|--|..++..+++.+|+.+|+-.
T Consensus 229 ~~kvL~~Fi~~Glv~vN~~F~~~NSGdtMLDNA~Ky~~~emi~~Llk~GA~~ 280 (284)
T PF06128_consen 229 SYKVLEYFINRGLVDVNKKFQKVNSGDTMLDNAMKYKNSEMIAFLLKYGAIS 280 (284)
T ss_pred cHHHHHHHHhccccccchhhhccCCcchHHHhHHhcCcHHHHHHHHHcCccc
Confidence 3456666666654321 113356778888888888888888888887643
No 122
>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=85.30 E-value=4.7 Score=22.44 Aligned_cols=75 Identities=13% Similarity=0.171 Sum_probs=43.1
Q ss_pred cHHHHHHhcCCHHHHHHHHHh----CCCCccccccCCCcHHHHHHHhCCHHHHHHHHhcC-ccccc---CCCCCccHhHH
Q 035842 7 TTLHEAMCHGSVHVVEILSRK----DPDYPYSAKNYGKMPLYMAAEKGCLEMVDVLLSTY-TFMSH---GSPSGKTALHA 78 (82)
Q Consensus 7 ~~l~~a~~~~~~~~~~~ll~~----~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~-~~~~~---~~~~~~t~l~~ 78 (82)
+++.++...+..+++.+|+.. ..++.......-.--..++.......+.++++.+| +++|. +-..|.|-|.=
T Consensus 181 ~Am~~si~~~K~dva~~lls~f~ft~~dv~~~~~~~ydieY~LS~h~a~~kvL~~Fi~~Glv~vN~~F~~~NSGdtMLDN 260 (284)
T PF06128_consen 181 QAMWLSIGNAKEDVALYLLSKFNFTKQDVASMEKELYDIEYLLSEHSASYKVLEYFINRGLVDVNKKFQKVNSGDTMLDN 260 (284)
T ss_pred HHHHHHhcccHHHHHHHHHhhcceecchhhhcCcchhhHHHHHhhcCCcHHHHHHHHhccccccchhhhccCCcchHHHh
Confidence 356666666667777777765 22221111111111233334455678999999987 56664 34478888876
Q ss_pred hhh
Q 035842 79 AAR 81 (82)
Q Consensus 79 a~~ 81 (82)
|.+
T Consensus 261 A~K 263 (284)
T PF06128_consen 261 AMK 263 (284)
T ss_pred HHh
Confidence 654
No 123
>KOG1595 consensus CCCH-type Zn-finger protein [General function prediction only]
Probab=71.14 E-value=0.51 Score=28.73 Aligned_cols=70 Identities=14% Similarity=-0.043 Sum_probs=38.7
Q ss_pred CCccHHHHHHhcCCHHHHHHHHHhCCCCccccccCCCc-HHHHHHHhCCHHHHHHHHhcCcccccCCCCCc
Q 035842 4 EKNTTLHEAMCHGSVHVVEILSRKDPDYPYSAKNYGKM-PLYMAAEKGCLEMVDVLLSTYTFMSHGSPSGK 73 (82)
Q Consensus 4 ~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~t-~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~ 73 (82)
+.+|++..|+..|.......++..+.+-.+..-..|.. ....-...+..+....|+..++..+..|..|.
T Consensus 57 ~qR~~~~v~~~~Gs~~~~~~i~~~~~~e~~~~C~~~~~~C~~~g~s~~~~e~~~hL~~~k~~~~~tda~g~ 127 (528)
T KOG1595|consen 57 NQRRRRPVARRDGSFNYSPDIYCTKYDEVTGICPDGDEHCAVLGRSVGDTERTYHLRYYKTLPCVTDARGN 127 (528)
T ss_pred ccccccchhhhcCccccccceeecchhhccccCCCCcccchhcccccCCcceeEeccccccccCccccCCC
Confidence 35678888888888887777766544322122223333 22222334455666666666666666665554
No 124
>KOG1709 consensus Guanidinoacetate methyltransferase and related proteins [Amino acid transport and metabolism]
Probab=59.62 E-value=12 Score=20.81 Aligned_cols=29 Identities=14% Similarity=-0.018 Sum_probs=14.6
Q ss_pred cccCCCcHHHHHHHhCCHHHHHHHHhcCc
Q 035842 35 AKNYGKMPLYMAAEKGCLEMVDVLLSTYT 63 (82)
Q Consensus 35 ~~~~~~t~l~~a~~~~~~~~~~~l~~~~~ 63 (82)
.+....|+=-+|.+.++.++.+.|++.|+
T Consensus 11 id~~n~t~gd~a~ern~~rly~~lv~~gv 39 (271)
T KOG1709|consen 11 IDYENKTVGDLALERNQSRLYRRLVEAGV 39 (271)
T ss_pred cChhhCCchHHHHHccHHHHHHHHHHcCC
Confidence 34444455555555555555555555443
No 125
>KOG4591 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only]
Probab=50.27 E-value=18 Score=19.86 Aligned_cols=43 Identities=16% Similarity=0.110 Sum_probs=30.5
Q ss_pred CCCcHHHHHHHhCCHHH-HHHHHhcCcc----cccCCCCCccHhHHhh
Q 035842 38 YGKMPLYMAAEKGCLEM-VDVLLSTYTF----MSHGSPSGKTALHAAA 80 (82)
Q Consensus 38 ~~~t~l~~a~~~~~~~~-~~~l~~~~~~----~~~~~~~~~t~l~~a~ 80 (82)
....|||-+..-++.++ .-++++..+. .|-.|.+|..+|.+|.
T Consensus 221 kTe~~LHk~iki~REDVl~LYfie~dakiP~~LNd~D~nG~~ALdiAL 268 (280)
T KOG4591|consen 221 KTENPLHKAIKIEREDVLFLYFIEMDAKIPGILNDADHNGALALDIAL 268 (280)
T ss_pred CCcchhHHhhhccccceeeehhhhccccccccccccCCCchHHHHHHH
Confidence 34468999988888775 3566665433 3556889999998875
No 126
>KOG3836 consensus HLH transcription factor EBF/Olf-1 and related DNA binding proteins [Transcription]
Probab=50.00 E-value=3.3 Score=25.99 Aligned_cols=43 Identities=21% Similarity=0.309 Sum_probs=29.2
Q ss_pred HHHhCCCCccccccCCCcHHHHHHHhCCHHHHHHHHhcCccccc
Q 035842 24 LSRKDPDYPYSAKNYGKMPLYMAAEKGCLEMVDVLLSTYTFMSH 67 (82)
Q Consensus 24 ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~ 67 (82)
+++.+... +..+..+.+|+|+++..|..++...++....+.+.
T Consensus 415 lik~~~~~-~~~d~f~~~p~~~~~~sgdp~~~~~~~~~~~~~~~ 457 (605)
T KOG3836|consen 415 LIKKGAHP-NDDDKFGFTPLHIPQISGDPRIIQLLLNCKVAISL 457 (605)
T ss_pred eecccCcc-chhcccccccccccCCCCCHHHhhhhhhhhhhhhc
Confidence 34444443 25677888999999999998888777765444433
No 127
>PF12645 HTH_16: Helix-turn-helix domain; InterPro: IPR024760 This domain appears to be a helix-turn-helix domain, suggesting a transcriptional regulatory protein. Some proteins with this domain are annotated as conjugative transposon proteins.
Probab=49.03 E-value=24 Score=15.27 Aligned_cols=20 Identities=15% Similarity=0.220 Sum_probs=14.6
Q ss_pred HHHHHHhcCCHHHHHHHHHh
Q 035842 8 TLHEAMCHGSVHVVEILSRK 27 (82)
Q Consensus 8 ~l~~a~~~~~~~~~~~ll~~ 27 (82)
++..+|..|+.+.++.++.+
T Consensus 2 ~vI~~A~~GD~~A~~~IL~~ 21 (65)
T PF12645_consen 2 EVIKAAKQGDPEAMEEILKH 21 (65)
T ss_pred HHHHHHHcCCHHHHHHHHHH
Confidence 45677888888877776665
No 128
>cd08035 LARP_4 La RNA-binding domain of La-related protein 4. This domain is found in vertebrate La-related protein 4 (LARP4), also known as c-MPL binding protein. La-type domains often co-occur with RNA-recognition motifs (RRMs). A variety of La-related proteins (LARPs or La ribonucleoproteins), with differing domain architecture, appear to function as RNA-binding proteins in eukaryotic cellular processes.
Probab=31.58 E-value=27 Score=15.76 Aligned_cols=15 Identities=7% Similarity=0.153 Sum_probs=8.9
Q ss_pred CCCCCccHHHHHHhc
Q 035842 1 MNNEKNTTLHEAMCH 15 (82)
Q Consensus 1 ~d~~g~~~l~~a~~~ 15 (82)
||.+|+-|+...+.+
T Consensus 27 md~~G~Vpi~~iasF 41 (75)
T cd08035 27 MDSDQFVPIWTVANM 41 (75)
T ss_pred hCcCCCEehHHHhcc
Confidence 456677776655543
No 129
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=28.96 E-value=91 Score=20.61 Aligned_cols=45 Identities=13% Similarity=0.088 Sum_probs=28.3
Q ss_pred CHHHHHHHHHhCCCCccccccCCCcH---HHHHHHhCCHHHHHHHHhc
Q 035842 17 SVHVVEILSRKDPDYPYSAKNYGKMP---LYMAAEKGCLEMVDVLLST 61 (82)
Q Consensus 17 ~~~~~~~ll~~~~~~~~~~~~~~~t~---l~~a~~~~~~~~~~~l~~~ 61 (82)
...++++|++.|-.-...-...|.++ |.-||...+++++...+..
T Consensus 533 fia~AeyLve~gyt~~~kL~i~G~SaGGlLvga~iN~rPdLF~avia~ 580 (712)
T KOG2237|consen 533 FIACAEYLVENGYTQPSKLAIEGGSAGGLLVGACINQRPDLFGAVIAK 580 (712)
T ss_pred HHHHHHHHHHcCCCCccceeEecccCccchhHHHhccCchHhhhhhhc
Confidence 35678999998765333333444443 5556777778887666654
No 130
>PRK12798 chemotaxis protein; Reviewed
Probab=28.20 E-value=1.5e+02 Score=18.38 Aligned_cols=27 Identities=15% Similarity=0.036 Sum_probs=16.3
Q ss_pred ccCCCcHHHHHHHhCCHHHHHHHHhcC
Q 035842 36 KNYGKMPLYMAAEKGCLEMVDVLLSTY 62 (82)
Q Consensus 36 ~~~~~t~l~~a~~~~~~~~~~~l~~~~ 62 (82)
+.+-.-.+.+....|++.+++.|+..+
T Consensus 81 prNv~Aa~iy~lSGGnP~vlr~L~~~d 107 (421)
T PRK12798 81 PRNVDAALIYLLSGGNPATLRKLLARD 107 (421)
T ss_pred ccchhHHHhhHhcCCCHHHHHHHHHcC
Confidence 344445566666666777766666644
No 131
>cd08037 LARP_1 La RNA-binding domain of La-related protein 1. This domain is found in vertebrate La-related protein 1 (LARP1). A variety of La-related proteins (LARPs or La ribonucleoproteins), with differing domain architecture, appear to function as RNA-binding proteins in eukaryotic cellular processes.
Probab=27.04 E-value=45 Score=14.97 Aligned_cols=14 Identities=0% Similarity=-0.054 Sum_probs=7.6
Q ss_pred CCCCccHHHHHHhc
Q 035842 2 NNEKNTTLHEAMCH 15 (82)
Q Consensus 2 d~~g~~~l~~a~~~ 15 (82)
|.+|+-|+...+.+
T Consensus 28 d~dG~Vpi~~ia~F 41 (73)
T cd08037 28 DEDGFLPVTLIASF 41 (73)
T ss_pred ccCCCEeHHHHhcc
Confidence 45566666554433
No 132
>KOG4335 consensus FERM domain-containing protein KRIT1 [Signal transduction mechanisms]
Probab=26.23 E-value=57 Score=20.65 Aligned_cols=44 Identities=9% Similarity=-0.159 Sum_probs=27.1
Q ss_pred ccccCCCcHHHHHHHhCCHHHHHHHHhc-CcccccCCCCCccHhH
Q 035842 34 SAKNYGKMPLYMAAEKGCLEMVDVLLST-YTFMSHGSPSGKTALH 77 (82)
Q Consensus 34 ~~~~~~~t~l~~a~~~~~~~~~~~l~~~-~~~~~~~~~~~~t~l~ 77 (82)
-...+++++++++...++.+.+...... -.+.+..+..++++..
T Consensus 172 ~l~gq~sp~lll~~~s~h~~~v~~d~~~~~~~rn~~~~~~re~~~ 216 (558)
T KOG4335|consen 172 YLLGQQSPELLLRFTSAHDDDVAMDEPFLQFRRNVFFPKGRELQI 216 (558)
T ss_pred hhhccCCchhhhhccCCchhhhhccccchHHhhhhhcccCcchhh
Confidence 3567888999998888888776554442 2333334445555543
No 133
>PF08898 DUF1843: Domain of unknown function (DUF1843); InterPro: IPR014994 This domain is found in functionally uncharacterised proteins. It can be found independently or at the C terminus of the protein.
Probab=26.06 E-value=67 Score=13.50 Aligned_cols=21 Identities=14% Similarity=0.411 Sum_probs=17.2
Q ss_pred HHHHHHhcCCHHHHHHHHHhC
Q 035842 8 TLHEAMCHGSVHVVEILSRKD 28 (82)
Q Consensus 8 ~l~~a~~~~~~~~~~~ll~~~ 28 (82)
+++.|+.+|++.-++-|....
T Consensus 6 aiq~AiasGDLa~MK~l~~~a 26 (53)
T PF08898_consen 6 AIQQAIASGDLAQMKALAAQA 26 (53)
T ss_pred HHHHHHHcCcHHHHHHHHHHH
Confidence 688899999998888877654
No 134
>cd08036 LARP_5 La RNA-binding domain of La-related protein 5. This domain is found in vertebrate La-related protein 5 (LARP5). A variety of La-related proteins (LARPs or La ribonucleoproteins), with differing domain architecture, appear to function as RNA-binding proteins in eukaryotic cellular processes.
Probab=25.82 E-value=36 Score=15.41 Aligned_cols=16 Identities=6% Similarity=0.158 Sum_probs=9.2
Q ss_pred CCCCCccHHHHHHhcC
Q 035842 1 MNNEKNTTLHEAMCHG 16 (82)
Q Consensus 1 ~d~~g~~~l~~a~~~~ 16 (82)
||.+|+-|+-..+.++
T Consensus 27 md~~g~Vpi~~ia~F~ 42 (75)
T cd08036 27 MDSDQYVPIMTVANLD 42 (75)
T ss_pred hccCCCEehHHHhccH
Confidence 4566776666555443
No 135
>cd00280 TRFH Telomeric Repeat binding Factor or TTAGGG Repeat binding Factor, central (dimerization) domain Homology; TRFH. Telomeres are protein/DNA complexes that make up the physical ends of eukaryotic linear chromosomes and are essential for chromosome stability, protecting the chromosome ends from degradation and end-to-end fusion. Proteins TRF1, TRF2 and Taz1 bind telomeric DNA and are also involved in recruiting interacting proteins, TIN2, and Rap1, to the telomeres. It has also been demonstrated that PARP1 associates with TRF2 and is capable of poly(ADP-ribosyl)ation of TRF2, which affects binding of TRF2 to telomeric DNA. TRF1, TRF2 and Taz1 proteins contain three functional domains: an N-terminal acidic domain, a central TRF-specific/dimerization domain, and a C-terminal DNA binding domain with a single Myb-like repeat. Homodimerization, a prerequisite to DNA binding, results in the juxtaposition of two Myb DNA binding domains.
Probab=25.49 E-value=1.2e+02 Score=16.58 Aligned_cols=29 Identities=17% Similarity=0.141 Sum_probs=17.5
Q ss_pred HHHHHHHHh--cCcccccC--CCCCccHhHHhh
Q 035842 52 LEMVDVLLS--TYTFMSHG--SPSGKTALHAAA 80 (82)
Q Consensus 52 ~~~~~~l~~--~~~~~~~~--~~~~~t~l~~a~ 80 (82)
..++++|.. -|-+++.. +....|||..|.
T Consensus 57 l~i~QfLsRI~eG~~LD~~Fd~~~~~TPLESAl 89 (200)
T cd00280 57 LRIMQFLSRIAEGKNLDCQFENDEELTPLESAL 89 (200)
T ss_pred hHHHHHHHHHHcCCCCCCccCCCCCcChHHHHH
Confidence 345556655 46666543 334569998875
No 136
>PF10683 DBD_Tnp_Hermes: Hermes transposase DNA-binding domain ; InterPro: IPR018473 This domain confers specific DNA-binding on Hermes transposase [].; PDB: 2BW3_B.
Probab=24.77 E-value=7.9 Score=17.05 Aligned_cols=23 Identities=13% Similarity=0.306 Sum_probs=13.9
Q ss_pred HHHHHHHhCCHHHHHHHHhcCcc
Q 035842 42 PLYMAAEKGCLEMVDVLLSTYTF 64 (82)
Q Consensus 42 ~l~~a~~~~~~~~~~~l~~~~~~ 64 (82)
|+..-.-.|..+++++|++.|+.
T Consensus 30 pfsiv~gsGfk~la~~li~IGA~ 52 (68)
T PF10683_consen 30 PFSIVSGSGFKKLAQFLINIGAT 52 (68)
T ss_dssp -GGGGG-HHHHHHHHHHHHHHHH
T ss_pred cceeeccccHHHHHHHHHHHhHH
Confidence 44444446677888888886554
No 137
>cd08038 LARP_2 La RNA-binding domain of La-related protein 2. This domain is found in vertebrate La-related protein 2 (LARP2). A variety of La-related proteins (LARPs or La ribonucleoproteins), with differing domain architecture, appear to function as RNA-binding proteins in eukaryotic cellular processes.
Probab=23.25 E-value=68 Score=14.43 Aligned_cols=14 Identities=0% Similarity=-0.194 Sum_probs=7.6
Q ss_pred CCCCccHHHHHHhc
Q 035842 2 NNEKNTTLHEAMCH 15 (82)
Q Consensus 2 d~~g~~~l~~a~~~ 15 (82)
|.+|+-|+-..+.+
T Consensus 28 ~~~G~Vpl~~ia~F 41 (73)
T cd08038 28 DLQGFLPISLIAGF 41 (73)
T ss_pred CCCCCEeHHHHhcc
Confidence 55566665554433
No 138
>cd08034 LARP_1_2 La RNA-binding domain proteins similar to La-related proteins 1 and 2. This domain is found in proteins similar to vertebrate La-related proteins 1 and 2 (LARP1, LARP2). A variety of La-related proteins (LARPs or La ribonucleoproteins), with differing domain architecture, appear to function as RNA-binding proteins in eukaryotic cellular processes.
Probab=21.02 E-value=80 Score=14.15 Aligned_cols=14 Identities=7% Similarity=-0.024 Sum_probs=7.4
Q ss_pred CCCCccHHHHHHhc
Q 035842 2 NNEKNTTLHEAMCH 15 (82)
Q Consensus 2 d~~g~~~l~~a~~~ 15 (82)
|.+|+-|+-..+.+
T Consensus 28 ~~~G~Vpl~~i~~F 41 (73)
T cd08034 28 DPEGYLPIALIASF 41 (73)
T ss_pred CCCCCEeHHHHhcc
Confidence 45566665554433
Done!