Your job contains 1 sequence.
>035848
MENAKAAPTGCFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASGGGGGGSGVGDGGVSV
SKSAIGVKEKPKKLPRSRPKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIG
LYSEWHSHLLPYYSFDHFVSKVEQVAASRRVKMCIRDLRDRVANGGDPTKLHEAAVEHDG
PVDEQAPAEAMSSERQPHQQDPASNVHAADDFNDLFNKVYRTATEVSIFSNLILRLFLFI
FCFL
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 035848
(244 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2075507 - symbol:AT3G02820 species:3702 "Arabi... 407 6.8e-49 2
UNIPROTKB|Q5F416 - symbol:TIPIN "TIMELESS-interacting pro... 133 1.1e-10 2
UNIPROTKB|H3BU04 - symbol:TIPIN "TIMELESS-interacting pro... 143 1.6e-09 1
UNIPROTKB|Q9BVW5 - symbol:TIPIN "TIMELESS-interacting pro... 143 1.7e-09 1
UNIPROTKB|E2RR93 - symbol:TIPIN "Uncharacterized protein"... 142 1.8e-09 1
POMBASE|SPBC30D10.04 - symbol:swi3 "replication fork prot... 134 4.7e-09 1
UNIPROTKB|F1NK30 - symbol:TIPIN "TIMELESS-interacting pro... 133 1.8e-08 1
UNIPROTKB|Q3ZCC4 - symbol:TIPIN "TIMELESS-interacting pro... 133 1.9e-08 1
UNIPROTKB|F1SJJ8 - symbol:TIPIN "Uncharacterized protein"... 131 3.2e-08 1
UNIPROTKB|Q0IHI4 - symbol:tipin "TIMELESS-interacting pro... 130 6.8e-08 1
RGD|1564084 - symbol:Tipin "timeless interacting protein"... 127 1.4e-07 1
UNIPROTKB|F1M1S7 - symbol:F1M1S7 "Uncharacterized protein... 127 1.5e-07 1
UNIPROTKB|H3BTH1 - symbol:TIPIN "TIMELESS-interacting pro... 118 2.3e-07 1
RGD|1561480 - symbol:Tipin-ps1 "timeless interacting prot... 127 2.4e-07 1
RGD|2323509 - symbol:Tipinl1 "TIMELESS interacting protei... 127 2.4e-07 1
MGI|MGI:1921571 - symbol:Tipin "timeless interacting prot... 126 5.3e-07 1
ZFIN|ZDB-GENE-040801-189 - symbol:tipin "timeless interac... 123 2.4e-06 1
ASPGD|ASPL0000067430 - symbol:AN6977 species:162425 "Emer... 105 0.00017 2
>TAIR|locus:2075507 [details] [associations]
symbol:AT3G02820 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0048478 "replication fork protection"
evidence=IEA] [GO:0006261 "DNA-dependent DNA replication"
evidence=RCA] [GO:0006270 "DNA replication initiation"
evidence=RCA] [GO:0006275 "regulation of DNA replication"
evidence=RCA] [GO:0010228 "vegetative to reproductive phase
transition of meristem" evidence=RCA] [GO:0051726 "regulation of
cell cycle" evidence=RCA] InterPro:IPR001878 InterPro:IPR012923
Pfam:PF00098 Pfam:PF07962 ProDom:PD089639 PROSITE:PS50158
SMART:SM00343 GO:GO:0005634 EMBL:CP002686 GO:GO:0046872
GO:GO:0008270 GO:GO:0003676 GO:GO:0006974 GO:GO:0007049
Gene3D:4.10.60.10 GO:GO:0048478 KO:K10904 EMBL:BT025722
EMBL:AK119002 IPI:IPI00523478 RefSeq:NP_186931.2 UniGene:At.41073
EnsemblPlants:AT3G02820.1 GeneID:821018 KEGG:ath:AT3G02820
TAIR:At3g02820 HOGENOM:HOG000239518 InParanoid:Q8GW91 OMA:WSRDCPS
PhylomeDB:Q8GW91 ProtClustDB:CLSN2690678 Genevestigator:Q8GW91
Uniprot:Q8GW91
Length = 282
Score = 407 (148.3 bits), Expect = 6.8e-49, Sum P(2) = 6.8e-49
Identities = 81/147 (55%), Positives = 109/147 (74%)
Query: 84 DLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHLLPYYSFDHFVSKVE 143
+LLLS+DGLG+VLR+FP++FKYRGRG EVSDLG+LI LYSEWH+HLLPYYSFDHFV KV+
Sbjct: 77 ELLLSEDGLGYVLRYFPKSFKYRGRGKEVSDLGNLIRLYSEWHTHLLPYYSFDHFVHKVQ 136
Query: 144 QVAASRRVKMCIRDLRDRVANGGDPTKLHEAAVEHDGPVDEQAPAEAMSSERQPHQQDPA 203
QVA+++RVK CI +LR+RVA+G DP KL+E E+ P D+Q M + P+
Sbjct: 137 QVASTKRVKNCINELRERVASGVDPNKLYEKQEENTVPSDDQD----MDQPSHDEENIPS 192
Query: 204 SNVHA---ADDFND-LFNKVYRTATEV 226
+V A AD F D + N+++ A+++
Sbjct: 193 KSVDADTNADAFEDSMLNEIFDNASKL 219
Score = 120 (47.3 bits), Expect = 6.8e-49, Sum P(2) = 6.8e-49
Identities = 18/20 (90%), Positives = 20/20 (100%)
Query: 5 KAAPTGCFKCGRPGHWSRDC 24
++APTGCFKCGRPGHWSRDC
Sbjct: 2 ESAPTGCFKCGRPGHWSRDC 21
>UNIPROTKB|Q5F416 [details] [associations]
symbol:TIPIN "TIMELESS-interacting protein" species:9031
"Gallus gallus" [GO:0048478 "replication fork protection"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0000076 "DNA replication checkpoint"
evidence=ISS] [GO:0000790 "nuclear chromatin" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0031573 "intra-S DNA damage
checkpoint" evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=ISS] [GO:0033261 "regulation of S phase" evidence=ISS]
InterPro:IPR012923 Pfam:PF07962 ProDom:PD089639 GO:GO:0005737
GO:GO:0051301 GO:GO:0007067 GO:GO:0008284 GO:GO:0000790
GO:GO:0048478 GO:GO:0031573 GO:GO:0033261 GO:GO:0000076
eggNOG:NOG323610 CTD:54962 HOVERGEN:HBG061130 KO:K10904
EMBL:AJ851484 IPI:IPI00572013 RefSeq:NP_001012708.1
UniGene:Gga.44705 STRING:Q5F416 GeneID:415548 KEGG:gga:415548
HOGENOM:HOG000154594 InParanoid:Q5F416 OrthoDB:EOG4ZGPDR
NextBio:20819131 Uniprot:Q5F416
Length = 283
Score = 133 (51.9 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 41/127 (32%), Positives = 59/127 (46%)
Query: 86 LLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHLLPYYSFDHFVSKVEQV 145
L+S+ GL LRH K++G+GHE DL L+ W L P FD F+ +VE +
Sbjct: 79 LVSERGLP-ALRHMFDNVKFKGKGHEAEDLKTLLRHMEHWAHRLFPKLQFDDFIDRVESL 137
Query: 146 AASRRVKMCIRDLR--------DRVAN---GGDPTKLHEAAVE-HD--GPVDE--QAPAE 189
+ V+ C++ +R D AN GG+ L A E H G V E P
Sbjct: 138 GNKKEVQTCLKRIRLDLPILHEDFTANEGGGGESNGLDMATEEVHSFSGNVGELDSLPGT 197
Query: 190 AMSSERQ 196
++ E+Q
Sbjct: 198 TLTEEQQ 204
Score = 38 (18.4 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 10/43 (23%), Positives = 16/43 (37%)
Query: 185 QAPAEAMSSERQPHQQDPASNVHAADDFNDLFNKVYRTATEVS 227
Q +++ E P + N+ A D TAT V+
Sbjct: 223 QCNSQSQHDELSPSYPEEELNIPVARDLTGALEDTQVTATNVA 265
>UNIPROTKB|H3BU04 [details] [associations]
symbol:TIPIN "TIMELESS-interacting protein" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IEA] [GO:0048478
"replication fork protection" evidence=IEA] [GO:0000077 "DNA damage
checkpoint" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0009411 "response to UV" evidence=IEA] InterPro:IPR012923
Pfam:PF07962 ProDom:PD089639 GO:GO:0005634 GO:GO:0005737
GO:GO:0000077 GO:GO:0009411 GO:GO:0007049 GO:GO:0048478
EMBL:AC055855 HGNC:HGNC:30750 Ensembl:ENST00000562124 Bgee:H3BU04
Uniprot:H3BU04
Length = 294
Score = 143 (55.4 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 38/113 (33%), Positives = 58/113 (51%)
Query: 86 LLSDDGLGFVLRH-FPRAFKYRGRGHEVSDLGHLIGLYSEWHSHLLPYYSFDHFVSKVEQ 144
L+S+ GL LRH F +A K++G+GHE DL LI W L P F+ F+ +VE
Sbjct: 72 LISERGLP-ALRHVFDKA-KFKGKGHEAEDLKMLIRHMEHWAHRLFPKLQFEDFIDRVEY 129
Query: 145 VAASRRVKMCIRDLRDRVANGGDPTKLHEAAVEHDGPVDEQAPAEAMSSERQP 197
+ + + V+ C++ +R D LHE V ++ V E + S+E P
Sbjct: 130 LGSKKEVQTCLKRIRL------DLPILHEDFVSNNDEVAENNEHDVTSTELDP 176
>UNIPROTKB|Q9BVW5 [details] [associations]
symbol:TIPIN "TIMELESS-interacting protein" species:9606
"Homo sapiens" [GO:0048478 "replication fork protection"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0009411 "response to UV" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0000076 "DNA
replication checkpoint" evidence=IMP] [GO:0000790 "nuclear
chromatin" evidence=IDA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IMP] [GO:0031573 "intra-S DNA damage
checkpoint" evidence=IMP] [GO:0033261 "regulation of S phase"
evidence=IMP] [GO:0005634 "nucleus" evidence=IDA] [GO:0033262
"regulation of DNA replication involved in S phase" evidence=TAS]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=IDA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=IDA] InterPro:IPR012923 Pfam:PF07962 ProDom:PD089639
GO:GO:0005794 GO:GO:0009411 GO:GO:0051301 GO:GO:0007067
GO:GO:0008284 GO:GO:0000790 EMBL:CH471082 GO:GO:0048478
GO:GO:0031573 GO:GO:0000076 eggNOG:NOG323610 EMBL:AC055855
GO:GO:0033262 CTD:54962 HOVERGEN:HBG061130 KO:K10904 OMA:MLEPQEN
HOGENOM:HOG000154594 OrthoDB:EOG4ZGPDR EMBL:AK000523 EMBL:EU551725
EMBL:BC000870 EMBL:BK001386 IPI:IPI00306452 RefSeq:NP_060328.2
UniGene:Hs.740671 ProteinModelPortal:Q9BVW5 IntAct:Q9BVW5
STRING:Q9BVW5 PhosphoSite:Q9BVW5 DMDM:296452932 PaxDb:Q9BVW5
PRIDE:Q9BVW5 DNASU:54962 Ensembl:ENST00000261881 GeneID:54962
KEGG:hsa:54962 UCSC:uc002apr.2 GeneCards:GC15M066629
HGNC:HGNC:30750 HPA:HPA039704 MIM:610716 neXtProt:NX_Q9BVW5
PharmGKB:PA147357269 InParanoid:Q9BVW5 PhylomeDB:Q9BVW5
GenomeRNAi:54962 NextBio:58172 Bgee:Q9BVW5 CleanEx:HS_TIPIN
Genevestigator:Q9BVW5 Uniprot:Q9BVW5
Length = 301
Score = 143 (55.4 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 38/113 (33%), Positives = 58/113 (51%)
Query: 86 LLSDDGLGFVLRH-FPRAFKYRGRGHEVSDLGHLIGLYSEWHSHLLPYYSFDHFVSKVEQ 144
L+S+ GL LRH F +A K++G+GHE DL LI W L P F+ F+ +VE
Sbjct: 72 LISERGLP-ALRHVFDKA-KFKGKGHEAEDLKMLIRHMEHWAHRLFPKLQFEDFIDRVEY 129
Query: 145 VAASRRVKMCIRDLRDRVANGGDPTKLHEAAVEHDGPVDEQAPAEAMSSERQP 197
+ + + V+ C++ +R D LHE V ++ V E + S+E P
Sbjct: 130 LGSKKEVQTCLKRIRL------DLPILHEDFVSNNDEVAENNEHDVTSTELDP 176
>UNIPROTKB|E2RR93 [details] [associations]
symbol:TIPIN "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0033261 "regulation of S phase" evidence=IEA]
[GO:0031573 "intra-S DNA damage checkpoint" evidence=IEA]
[GO:0009411 "response to UV" evidence=IEA] [GO:0008284 "positive
regulation of cell proliferation" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=IEA] [GO:0000790 "nuclear chromatin"
evidence=IEA] [GO:0000076 "DNA replication checkpoint"
evidence=IEA] [GO:0048478 "replication fork protection"
evidence=IEA] InterPro:IPR012923 Pfam:PF07962 ProDom:PD089639
GO:GO:0005794 GO:GO:0009411 GO:GO:0008284 GO:GO:0007049
GO:GO:0000790 GO:GO:0048478 GO:GO:0031573 GO:GO:0033261
GO:GO:0000076 CTD:54962 GeneTree:ENSGT00390000005764 KO:K10904
OMA:MLEPQEN EMBL:AAEX03016225 RefSeq:XP_003433975.1
Ensembl:ENSCAFT00000027379 GeneID:100683743 KEGG:cfa:100683743
Uniprot:E2RR93
Length = 286
Score = 142 (55.0 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 36/113 (31%), Positives = 57/113 (50%)
Query: 86 LLSDDGLGFVLRH-FPRAFKYRGRGHEVSDLGHLIGLYSEWHSHLLPYYSFDHFVSKVEQ 144
L+S+ GL LRH F A K++G+GHE DL LI W L P F+ F+ +VE
Sbjct: 72 LISERGLP-ALRHVFDNA-KFKGKGHEAEDLKTLIRHMEHWAHRLFPKLQFEDFIDRVEY 129
Query: 145 VAASRRVKMCIRDLRDRVANGGDPTKLHEAAVEHDGPVDEQAPAEAMSSERQP 197
+ + + V+ C++ +R D +HE + +DG E + ++E P
Sbjct: 130 LGSKKEVQTCLKRIRL------DLPIIHEDFISNDGEAGENHGYDKTATELDP 176
>POMBASE|SPBC30D10.04 [details] [associations]
symbol:swi3 "replication fork protection complex
subunit Swi3" species:4896 "Schizosaccharomyces pombe" [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0006974 "response to
DNA damage stimulus" evidence=IEA] [GO:0031298 "replication fork
protection complex" evidence=TAS] [GO:0043111 "replication fork
arrest" evidence=IC] [GO:0043596 "nuclear replication fork"
evidence=IC] [GO:0048478 "replication fork protection"
evidence=IDA] [GO:0071515 "genetic imprinting at mating-type locus"
evidence=IMP] InterPro:IPR012923 Pfam:PF07962 ProDom:PD089639
PomBase:SPBC30D10.04 GO:GO:0005739 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0006974 GO:GO:0007049 GO:GO:0048478
GO:GO:0031298 GO:GO:0043111 KO:K10998 eggNOG:NOG323610
OrthoDB:EOG4936TD GO:GO:0071515 EMBL:AY498547 EMBL:AY623652
PIR:T40192 RefSeq:NP_001018832.1 IntAct:O14350 STRING:O14350
EnsemblFungi:SPBC30D10.04.1 GeneID:3361323 KEGG:spo:SPBC30D10.04
NextBio:20811395 Uniprot:O14350
Length = 181
Score = 134 (52.2 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 42/131 (32%), Positives = 64/131 (48%)
Query: 86 LLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHLLPYYSFDHFVSKVEQV 145
L+S++G+ LR R K +G+GHE DL L+G+Y W L P +FD +S ++ +
Sbjct: 57 LISENGIP-KLRKMMRKVKLKGKGHEAKDLKQLLGMYHIWTHELYPRATFDDSISYLKTL 115
Query: 146 AASRRVKMCIRDLRDRVA--NGGDPTKLHEAAVEHDGPVDEQAPAEAMSSERQPHQQDPA 203
R VK+ R + +A NG D A++ GP + S + P+ QD A
Sbjct: 116 GKHRSVKVRRRGWINEIAVENGSDSN----ASL-FTGP-SSNSLVNLTSGD--PYVQDTA 167
Query: 204 SNVHAADDFND 214
+ A D ND
Sbjct: 168 DDAFVAQD-ND 177
>UNIPROTKB|F1NK30 [details] [associations]
symbol:TIPIN "TIMELESS-interacting protein" species:9031
"Gallus gallus" [GO:0048478 "replication fork protection"
evidence=IEA] [GO:0000076 "DNA replication checkpoint"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0008284 "positive
regulation of cell proliferation" evidence=IEA] [GO:0009411
"response to UV" evidence=IEA] [GO:0031573 "intra-S DNA damage
checkpoint" evidence=IEA] [GO:0033261 "regulation of S phase"
evidence=IEA] InterPro:IPR012923 Pfam:PF07962 ProDom:PD089639
GO:GO:0005794 GO:GO:0009411 GO:GO:0008284 GO:GO:0007049
GO:GO:0000790 GO:GO:0048478 GO:GO:0031573 GO:GO:0033261
GO:GO:0000076 GeneTree:ENSGT00390000005764 OMA:MLEPQEN
IPI:IPI00572013 EMBL:AADN02038918 PRIDE:F1NK30
Ensembl:ENSGALT00000012379 Uniprot:F1NK30
Length = 283
Score = 133 (51.9 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 41/127 (32%), Positives = 59/127 (46%)
Query: 86 LLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHLLPYYSFDHFVSKVEQV 145
L+S+ GL LRH K++G+GHE DL L+ W L P FD F+ +VE +
Sbjct: 79 LVSERGLP-ALRHMFDNVKFKGKGHEAEDLKTLLRHMEHWAHRLFPKLQFDDFIDRVESL 137
Query: 146 AASRRVKMCIRDLR--------DRVAN---GGDPTKLHEAAVE-HD--GPVDE--QAPAE 189
+ V+ C++ +R D AN GG+ L A E H G V E P
Sbjct: 138 GNKKEVQTCLKRIRLDLPILHEDFTANEGGGGESNGLDMATEEVHSFSGNVGELDSLPGT 197
Query: 190 AMSSERQ 196
++ E+Q
Sbjct: 198 TLTEEQQ 204
>UNIPROTKB|Q3ZCC4 [details] [associations]
symbol:TIPIN "TIMELESS-interacting protein" species:9913
"Bos taurus" [GO:0008284 "positive regulation of cell
proliferation" evidence=ISS] [GO:0000790 "nuclear chromatin"
evidence=ISS] [GO:0000076 "DNA replication checkpoint"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0033261
"regulation of S phase" evidence=ISS] [GO:0031573 "intra-S DNA
damage checkpoint" evidence=ISS] [GO:0009411 "response to UV"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0048478 "replication fork protection"
evidence=IEA] InterPro:IPR012923 Pfam:PF07962 ProDom:PD089639
GO:GO:0005794 GO:GO:0009411 GO:GO:0051301 GO:GO:0007067
GO:GO:0008284 GO:GO:0000790 GO:GO:0048478 GO:GO:0031573
GO:GO:0033261 GO:GO:0000076 EMBL:BC102519 IPI:IPI00690249
RefSeq:NP_001098806.1 UniGene:Bt.49308 Ensembl:ENSBTAT00000000482
GeneID:506176 KEGG:bta:506176 CTD:54962
GeneTree:ENSGT00390000005764 HOVERGEN:HBG061130 KO:K10904
OMA:MLEPQEN NextBio:20867483 ArrayExpress:Q3ZCC4 Uniprot:Q3ZCC4
Length = 290
Score = 133 (51.9 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 36/110 (32%), Positives = 57/110 (51%)
Query: 86 LLSDDGLGFVLRH-FPRAFKYRGRGHEVSDLGHLIGLYSEWHSHLLPYYSFDHFVSKVEQ 144
L+S+ GL LRH F +A K++G+GHE DL LI W L P F+ F+ +VE
Sbjct: 72 LISERGLP-ALRHVFEKA-KFKGKGHEAEDLKTLIRHMEHWAHRLFPKLQFEDFIDRVEC 129
Query: 145 VAASRRVKMCIRDLRDRVANGGDPTKLHEAAVEHDGPVDEQAPAEAMSSE 194
+ + V+ C++ +R D LHE V ++ V+E + ++E
Sbjct: 130 LGNKKEVQTCLKRIRL------DLPILHEDFVSNNDEVEENNGHDVTATE 173
>UNIPROTKB|F1SJJ8 [details] [associations]
symbol:TIPIN "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0033261 "regulation of S phase" evidence=IEA]
[GO:0031573 "intra-S DNA damage checkpoint" evidence=IEA]
[GO:0009411 "response to UV" evidence=IEA] [GO:0008284 "positive
regulation of cell proliferation" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=IEA] [GO:0000790 "nuclear chromatin"
evidence=IEA] [GO:0000076 "DNA replication checkpoint"
evidence=IEA] [GO:0048478 "replication fork protection"
evidence=IEA] InterPro:IPR012923 Pfam:PF07962 ProDom:PD089639
GO:GO:0005794 GO:GO:0009411 GO:GO:0008284 GO:GO:0007049
GO:GO:0000790 GO:GO:0048478 GO:GO:0031573 GO:GO:0033261
GO:GO:0000076 GeneTree:ENSGT00390000005764 OMA:MLEPQEN
EMBL:CU062652 Ensembl:ENSSSCT00000005454 Uniprot:F1SJJ8
Length = 289
Score = 131 (51.2 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 36/127 (28%), Positives = 61/127 (48%)
Query: 86 LLSDDGLGFVLRH-FPRAFKYRGRGHEVSDLGHLIGLYSEWHSHLLPYYSFDHFVSKVEQ 144
L+S+ GL LRH F +A K++G+GHE DL LI W L P F+ F+ +VE
Sbjct: 71 LISERGLP-ALRHVFDKA-KFKGKGHEAEDLKMLIRHMEHWAHRLFPKLQFEDFIDRVEY 128
Query: 145 VAASRRVKMCIRDLRDRVANGGDPTKLHEAAVEHDGPVDEQAPAEAMSSERQPHQQDPAS 204
+ + V+ C++ +R D LH+ + ++ V E + +E P + +
Sbjct: 129 LGNKKEVQTCLKRIRL------DLPILHDDFISNNDDVGEDNGHDVTVTELDPFLTNSSE 182
Query: 205 NVHAADD 211
+ A +
Sbjct: 183 SAKFASE 189
>UNIPROTKB|Q0IHI4 [details] [associations]
symbol:tipin "TIMELESS-interacting protein" species:8355
"Xenopus laevis" [GO:0000076 "DNA replication checkpoint"
evidence=ISS] [GO:0000790 "nuclear chromatin" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0008284 "positive
regulation of cell proliferation" evidence=ISS] [GO:0031573
"intra-S DNA damage checkpoint" evidence=ISS] [GO:0033261
"regulation of S phase" evidence=ISS] InterPro:IPR012923
Pfam:PF07962 ProDom:PD089639 GO:GO:0005737 GO:GO:0051301
GO:GO:0007067 GO:GO:0008284 GO:GO:0000790 GO:GO:0048478
GO:GO:0031573 GO:GO:0033261 GO:GO:0000076 HOVERGEN:HBG061130
KO:K10904 EMBL:AB208777 EMBL:BC123142 RefSeq:NP_001081090.1
UniGene:Xl.16228 DIP:DIP-46439N MINT:MINT-7386201 GeneID:394376
KEGG:xla:394376 CTD:394376 Uniprot:Q0IHI4
Length = 360
Score = 130 (50.8 bits), Expect = 6.8e-08, P = 6.8e-08
Identities = 35/122 (28%), Positives = 56/122 (45%)
Query: 86 LLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHLLPYYSFDHFVSKVEQV 145
L S GL LRH K++G+GHE DL L+ W L P F+ F++++E +
Sbjct: 79 LASQRGLP-ALRHMFDDVKFKGKGHETEDLKILLRQMENWAHRLFPKLQFEDFLNRLESM 137
Query: 146 AASRRVKMCIRDLRDRVANGGDPTKLHEAAVE-HDGPVDEQAPAEAMSSERQPHQQDPAS 204
+ V+ C++ +R + D E V+ D +D P+E S + H P+
Sbjct: 138 GNKKEVQTCLKKIRMDLPIVHDDFLSEEVVVQTEDHAID--MPSEDFSFPDELHVPSPSQ 195
Query: 205 NV 206
V
Sbjct: 196 PV 197
>RGD|1564084 [details] [associations]
symbol:Tipin "timeless interacting protein" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0048478 "replication fork protection"
evidence=IEA] InterPro:IPR012923 Pfam:PF07962 ProDom:PD089639
RGD:1564084 GO:GO:0005634 GO:GO:0006974 GO:GO:0007049 GO:GO:0048478
GeneTree:ENSGT00390000005764 IPI:IPI00197525
Ensembl:ENSRNOT00000066973 ArrayExpress:F1M2N9 Uniprot:F1M2N9
Length = 233
Score = 127 (49.8 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 33/108 (30%), Positives = 53/108 (49%)
Query: 86 LLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHLLPYYSFDHFVSKVEQV 145
L S+ GL LRH K++G+GHE DL LI W L P F+ F+ +VE +
Sbjct: 26 LTSERGLP-ALRHVFDKTKFKGKGHEAEDLKTLIRHMEHWAHRLFPKLQFEDFIDRVENL 84
Query: 146 AASRRVKMCIRDLRDRVANGGDPTKLHEAAVEHDGPVDEQAPAEAMSS 193
+ V+ C++ +R D +HE V ++ V+E +A ++
Sbjct: 85 GNKKEVQTCLKRIRL------DLPIVHEDFVNNNDEVEETNSLDAAAT 126
>UNIPROTKB|F1M1S7 [details] [associations]
symbol:F1M1S7 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0048478 "replication fork protection"
evidence=IEA] InterPro:IPR012923 Pfam:PF07962 ProDom:PD089639
GO:GO:0005634 GO:GO:0006974 GO:GO:0007049 GO:GO:0048478
IPI:IPI00952393 Ensembl:ENSRNOT00000065257 ArrayExpress:F1M1S7
Uniprot:F1M1S7
Length = 240
Score = 127 (49.8 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 33/108 (30%), Positives = 53/108 (49%)
Query: 86 LLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHLLPYYSFDHFVSKVEQV 145
L S+ GL LRH K++G+GHE DL LI W L P F+ F+ +VE +
Sbjct: 27 LTSERGLP-ALRHVFDKTKFKGKGHEAEDLKTLIRHMEHWAHRLFPKLQFEDFIDRVENL 85
Query: 146 AASRRVKMCIRDLRDRVANGGDPTKLHEAAVEHDGPVDEQAPAEAMSS 193
+ V+ C++ +R D +HE V ++ V+E +A ++
Sbjct: 86 GNKKEVQTCLKRIRL------DLPIVHEDFVNNNDEVEETNSLDAAAT 127
>UNIPROTKB|H3BTH1 [details] [associations]
symbol:TIPIN "TIMELESS-interacting protein" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IEA] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0048478 "replication fork protection"
evidence=IEA] InterPro:IPR012923 Pfam:PF07962 ProDom:PD089639
GO:GO:0005634 GO:GO:0006974 GO:GO:0007049 GO:GO:0048478
EMBL:AC055855 HGNC:HGNC:30750 Ensembl:ENST00000568216 Bgee:H3BTH1
Uniprot:H3BTH1
Length = 141
Score = 118 (46.6 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 26/71 (36%), Positives = 41/71 (57%)
Query: 86 LLSDDGLGFVLRH-FPRAFKYRGRGHEVSDLGHLIGLYSEWHSHLLPYYSFDHFVSKVEQ 144
L+S+ GL LRH F +A K++G+GHE DL LI W L P F+ F+ +VE
Sbjct: 72 LISERGLP-ALRHVFDKA-KFKGKGHEAEDLKMLIRHMEHWAHRLFPKLQFEDFIDRVEY 129
Query: 145 VAASRRVKMCI 155
+ + + V++ +
Sbjct: 130 LGSKKEVQVSV 140
>RGD|1561480 [details] [associations]
symbol:Tipin-ps1 "timeless interacting protein, pseudogene 1"
species:10116 "Rattus norvegicus" [GO:0000076 "DNA replication
checkpoint" evidence=ISS] [GO:0000790 "nuclear chromatin"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=ISS] [GO:0031573 "intra-S DNA damage checkpoint"
evidence=ISS] [GO:0033261 "regulation of S phase" evidence=ISS]
[GO:0048478 "replication fork protection" evidence=IEA] [GO:0051301
"cell division" evidence=IEA] InterPro:IPR012923 Pfam:PF07962
ProDom:PD089639 RGD:1561480 GO:GO:0005737 GO:GO:0051301
GO:GO:0007067 GO:GO:0008284 GO:GO:0000790 GO:GO:0048478
GO:GO:0031573 GO:GO:0033261 GO:GO:0000076 eggNOG:NOG323610
CTD:54962 HOVERGEN:HBG061130 KO:K10904 HOGENOM:HOG000154594
OrthoDB:EOG4ZGPDR EMBL:BC097351 IPI:IPI00197525
RefSeq:NP_001020458.1 UniGene:Rn.225004 STRING:Q4QR88 GeneID:363076
KEGG:rno:363076 InParanoid:Q4QR88 NextBio:682354
ArrayExpress:Q4QR88 Genevestigator:Q4QR88 Uniprot:Q4QR88
Length = 276
Score = 127 (49.8 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 33/108 (30%), Positives = 53/108 (49%)
Query: 86 LLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHLLPYYSFDHFVSKVEQV 145
L S+ GL LRH K++G+GHE DL LI W L P F+ F+ +VE +
Sbjct: 69 LTSERGLP-ALRHVFDKTKFKGKGHEAEDLKTLIRHMEHWAHRLFPKLQFEDFIDRVENL 127
Query: 146 AASRRVKMCIRDLRDRVANGGDPTKLHEAAVEHDGPVDEQAPAEAMSS 193
+ V+ C++ +R D +HE V ++ V+E +A ++
Sbjct: 128 GNKKEVQTCLKRIRL------DLPIVHEDFVNNNDEVEETNSLDAAAT 169
>RGD|2323509 [details] [associations]
symbol:Tipinl1 "TIMELESS interacting protein like 1"
species:10116 "Rattus norvegicus" [GO:0000076 "DNA replication
checkpoint" evidence=ISO] [GO:0000077 "DNA damage checkpoint"
evidence=ISO] [GO:0000790 "nuclear chromatin" evidence=ISO]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005794 "Golgi apparatus" evidence=ISO]
[GO:0006974 "response to DNA damage stimulus" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0008284 "positive
regulation of cell proliferation" evidence=ISO] [GO:0009411
"response to UV" evidence=ISO] [GO:0031573 "intra-S DNA damage
checkpoint" evidence=ISO] [GO:0033261 "regulation of S phase"
evidence=ISO] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=ISO] [GO:0048478 "replication fork protection"
evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR012923 Pfam:PF07962 ProDom:PD089639 RGD:1564084
RGD:2323509 GO:GO:0005634 GO:GO:0006974 GO:GO:0007049 GO:GO:0048478
GeneTree:ENSGT00390000005764 OMA:MLEPQEN IPI:IPI00769221
RefSeq:XP_002730112.1 RefSeq:XP_003754769.1
Ensembl:ENSRNOT00000056239 GeneID:100359731 KEGG:rno:100359731
CTD:100359731 ArrayExpress:F1LM96 Uniprot:F1LM96
Length = 276
Score = 127 (49.8 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 33/108 (30%), Positives = 53/108 (49%)
Query: 86 LLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHLLPYYSFDHFVSKVEQV 145
L S+ GL LRH K++G+GHE DL LI W L P F+ F+ +VE +
Sbjct: 69 LTSERGLP-ALRHVFDKTKFKGKGHEAEDLKTLIRHMEHWAHRLFPKLQFEDFIDRVENL 127
Query: 146 AASRRVKMCIRDLRDRVANGGDPTKLHEAAVEHDGPVDEQAPAEAMSS 193
+ V+ C++ +R D +HE V ++ V+E +A ++
Sbjct: 128 GNKKEVQTCLKRIRL------DLPIVHEDFVNNNDEVEETNSLDAAAT 169
>MGI|MGI:1921571 [details] [associations]
symbol:Tipin "timeless interacting protein" species:10090
"Mus musculus" [GO:0000076 "DNA replication checkpoint"
evidence=ISO] [GO:0000077 "DNA damage checkpoint" evidence=IMP]
[GO:0000790 "nuclear chromatin" evidence=ISO] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0008284
"positive regulation of cell proliferation" evidence=ISO]
[GO:0009411 "response to UV" evidence=IMP] [GO:0031573 "intra-S DNA
damage checkpoint" evidence=ISO] [GO:0033261 "regulation of S
phase" evidence=ISO] [GO:0048478 "replication fork protection"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR012923 Pfam:PF07962 ProDom:PD089639 MGI:MGI:1921571
GO:GO:0005794 GO:GO:0005737 GO:GO:0009411 GO:GO:0051301
GO:GO:0007067 GO:GO:0008284 GO:GO:0000790 GO:GO:0048478
GO:GO:0031573 GO:GO:0033261 GO:GO:0000076 eggNOG:NOG323610
CTD:54962 GeneTree:ENSGT00390000005764 HOVERGEN:HBG061130 KO:K10904
OMA:MLEPQEN HOGENOM:HOG000154594 OrthoDB:EOG4ZGPDR EMBL:AK003451
EMBL:AK003802 EMBL:AK011357 EMBL:AK038111 EMBL:BC016211
EMBL:BK001385 IPI:IPI00471129 RefSeq:NP_079648.1 UniGene:Mm.196219
ProteinModelPortal:Q91WA1 IntAct:Q91WA1 STRING:Q91WA1
PhosphoSite:Q91WA1 PRIDE:Q91WA1 Ensembl:ENSMUST00000034964
GeneID:66131 KEGG:mmu:66131 UCSC:uc009qbr.1 InParanoid:Q91WA1
NextBio:320724 Bgee:Q91WA1 CleanEx:MM_TIPIN Genevestigator:Q91WA1
Uniprot:Q91WA1
Length = 278
Score = 126 (49.4 bits), Expect = 5.3e-07, P = 5.3e-07
Identities = 37/126 (29%), Positives = 58/126 (46%)
Query: 86 LLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHLLPYYSFDHFVSKVEQV 145
L S+ GL LRH K++G+GHE DL LI W L P F+ F+ +VE +
Sbjct: 69 LTSERGLP-ALRHVFDKTKFKGKGHEAEDLKTLIRHMEHWAHRLFPKLQFEDFIDRVENL 127
Query: 146 AASRRVKMCIRDLR-DRVANGGDPTKLHEAAVEHDGPVDEQA----PAEAMSSERQPHQQ 200
+ V+ C++ +R D D ++ E +GP D A P SS+ +
Sbjct: 128 GNKKEVQTCLKRIRLDLPIVHEDFVNNNDEVGEANGP-DVSATGFDPFLTSSSDSRKFAS 186
Query: 201 DPASNV 206
+P ++
Sbjct: 187 EPTRSL 192
>ZFIN|ZDB-GENE-040801-189 [details] [associations]
symbol:tipin "timeless interacting protein"
species:7955 "Danio rerio" [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0048478 "replication fork protection"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0003674 "molecular_function"
evidence=ND] [GO:0000790 "nuclear chromatin" evidence=ISS]
[GO:0000076 "DNA replication checkpoint" evidence=ISS] [GO:0008284
"positive regulation of cell proliferation" evidence=ISS]
[GO:0033261 "regulation of S phase" evidence=ISS] [GO:0031573
"intra-S DNA damage checkpoint" evidence=ISS] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] InterPro:IPR012923
Pfam:PF07962 ProDom:PD089639 ZFIN:ZDB-GENE-040801-189 GO:GO:0005634
GO:GO:0006974 GO:GO:0007049 GO:GO:0048478
GeneTree:ENSGT00390000005764 EMBL:CABZ01003662
Ensembl:ENSDART00000052474 OMA:KGHETEN Bgee:G1K2L6 Uniprot:G1K2L6
Length = 296
Score = 123 (48.4 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 34/117 (29%), Positives = 54/117 (46%)
Query: 86 LLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHLLPYYSFDHFVSKVEQV 145
L+S+ GL LR K++G+GHE +L L+ W L P F+ F+ KVE +
Sbjct: 79 LISEKGLP-ALRTLFEDVKFKGKGHETENLKLLMLKMENWAHRLYPKMQFEEFIDKVENL 137
Query: 146 AASRRVKMCIRDLRDRVANGGDPTKLHEAAVEHDGPVDEQAPAEAMSSERQPHQQDP 202
+ V+ C++ +R D HE V + + Q P E++ S +DP
Sbjct: 138 GGKKEVQTCLKRIRL------DMPITHEDYVAEEAEI--QVPEESVPSGDGGFPEDP 186
>ASPGD|ASPL0000067430 [details] [associations]
symbol:AN6977 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0048478 "replication fork protection"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR012923 Pfam:PF07962 ProDom:PD089639 GO:GO:0005634
GO:GO:0006974 GO:GO:0007049 EMBL:BN001304 GO:GO:0048478
EnsemblFungi:CADANIAT00000504 HOGENOM:HOG000234964 OMA:KHARISK
Uniprot:C8VB87
Length = 304
Score = 105 (42.0 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 20/67 (29%), Positives = 38/67 (56%)
Query: 86 LLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHLLPYYSFDHFVSKVEQV 145
LL+ G+ + R ++ +++G+GHE SDL L+ Y W L P F ++ +E++
Sbjct: 81 LLTQAGIPKLRRSAKKSLRFKGKGHEFSDLARLLNFYQLWLDDLFPRAKFVDGLAMIERL 140
Query: 146 AASRRVK 152
S+R++
Sbjct: 141 GHSKRLQ 147
Score = 38 (18.4 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 9/22 (40%), Positives = 13/22 (59%)
Query: 198 HQQDPASNVHAADDFNDLFNKV 219
H Q + N HA D ND F+++
Sbjct: 219 HLQSVSKN-HAQPDDNDEFDEL 239
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.135 0.421 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 244 176 0.00081 109 3 11 22 0.41 32
31 0.49 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 18
No. of states in DFA: 597 (63 KB)
Total size of DFA: 175 KB (2102 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 17.04u 0.08s 17.12t Elapsed: 00:00:02
Total cpu time: 17.04u 0.08s 17.12t Elapsed: 00:00:02
Start: Mon May 20 20:46:31 2013 End: Mon May 20 20:46:33 2013