BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 035848
(244 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224111344|ref|XP_002315820.1| predicted protein [Populus trichocarpa]
gi|222864860|gb|EEF01991.1| predicted protein [Populus trichocarpa]
Length = 283
Score = 249 bits (637), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 131/230 (56%), Positives = 159/230 (69%), Gaps = 5/230 (2%)
Query: 1 MENAKAAPTGCFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASGGGGGGSGVGDGGVSV 60
ME AAPTGC+KCGRPGHWSRDCP S+ + +SN S + S +
Sbjct: 1 MEKTNAAPTGCYKCGRPGHWSRDCPDSNPNPNPSSNPNSPRSFPSNNNSSSNNSNYFSGS 60
Query: 61 SKSAIGVKEKPKKLPRSRPKLTPDLLL-SDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLI 119
+ EKPKK+PRSRPKLTP+LLL D+GLGF+LRHFPR FKYRGRGHEVSDLG+LI
Sbjct: 61 NSKPAKAAEKPKKVPRSRPKLTPELLLGEDNGLGFILRHFPRNFKYRGRGHEVSDLGNLI 120
Query: 120 GLYSEWHSHLLPYYSFDHFVSKVEQVAASRRVKMCIRDLRDRVANGGDPTKLHEAAVEH- 178
GLYSEWHSHLLPYYSFD FV KVEQVAA++R KMC+R+LR+RVA+GGDPTKL E+ EH
Sbjct: 121 GLYSEWHSHLLPYYSFDQFVHKVEQVAATKRAKMCVRELRERVASGGDPTKLRESLTEHV 180
Query: 179 --DGPVDEQAPAEAMSSERQPHQQDPASNVHAADDF-NDLFNKVYRTATE 225
+ D P E ++SE +++DP S D D+ ++VY ATE
Sbjct: 181 SANVEHDLSTPDEGLNSEVTHNEEDPLSKNQDVDGLPEDMLHEVYDRATE 230
>gi|225425110|ref|XP_002272919.1| PREDICTED: TIMELESS-interacting protein [Vitis vinifera]
gi|297738277|emb|CBI27478.3| unnamed protein product [Vitis vinifera]
Length = 291
Score = 239 bits (611), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 135/229 (58%), Positives = 160/229 (69%), Gaps = 12/229 (5%)
Query: 1 MENAKAAPTGCFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASGGGGGGSGVGDGGVSV 60
ME + AAPTGC+KCGRPGHWSRDCPSS+++ N N N+ S G +
Sbjct: 1 MEKSGAAPTGCYKCGRPGHWSRDCPSSNTNPNPNPNPNPNSQNQY-----SSFNKG--TA 53
Query: 61 SKSAIGVKEKPKKLPRSRPKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIG 120
SK EKPKK PR+RP LTP+LLLSD+GLG+VLRHFP AFK+RGRGHEVSDLG+LIG
Sbjct: 54 SKPLAKSSEKPKKAPRTRPNLTPELLLSDNGLGYVLRHFPGAFKFRGRGHEVSDLGNLIG 113
Query: 121 LYSEWHSHLLPYYSFDHFVSKVEQVAASRRVKMCIRDLRDRVANGGDPTKLHEAAVEH-D 179
LYSEWHSHLLPYYSFD FV KVE+V ++RVK+CIR+LR+RV NGGD TK HE VEH D
Sbjct: 114 LYSEWHSHLLPYYSFDQFVHKVEKVGTTKRVKICIRELRERVENGGDLTKFHEPPVEHED 173
Query: 180 GPVDEQ---APAEAMSSERQPHQQDPASNVHAADDFNDLFNKVYRTATE 225
P +Q A E M+S H Q S H D D+ ++VYR+ATE
Sbjct: 174 CPNHDQGLPATEEVMNSVDPSHYQGDTSLNH-EDVQEDMLHEVYRSATE 221
>gi|449528333|ref|XP_004171159.1| PREDICTED: TIMELESS-interacting protein-like [Cucumis sativus]
Length = 284
Score = 237 bits (604), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 127/225 (56%), Positives = 152/225 (67%), Gaps = 17/225 (7%)
Query: 3 NAKAAPTGCFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASGGGGGGSGVGDGGVSVSK 62
NA APTGCFKCG+PGHWSRDCPSS+ + SN + + +S V
Sbjct: 6 NAVPAPTGCFKCGKPGHWSRDCPSSAPNPNPTSNSSTPSFSSPPAAPSKAV--------- 56
Query: 63 SAIGVKEKPKKLPRSRPKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLY 122
EKPKK PR+RPKLTP+LLLSDDGLG+VLRHFPRAFKYRGRGHE++DL +LIGLY
Sbjct: 57 ------EKPKKAPRTRPKLTPELLLSDDGLGYVLRHFPRAFKYRGRGHEINDLENLIGLY 110
Query: 123 SEWHSHLLPYYSFDHFVSKVEQVAASRRVKMCIRDLRDRVANGGDPTKLHEAAVEHDGPV 182
EWHSH+LPYYSF+HFV KVEQVAA++RVKMC+ +LR+RVA GGDPTK EA + +D
Sbjct: 111 REWHSHILPYYSFEHFVHKVEQVAATKRVKMCLGELRERVARGGDPTKWREAPILNDDDD 170
Query: 183 DEQAPAEAMSSERQPHQQDPAS--NVHAADDFNDLFNKVYRTATE 225
D EA + Q+ AS N A D D+ +VY ATE
Sbjct: 171 DVNNEKEAKDPDDVFDNQEEASLRNNGADDIEEDMLQEVYEKATE 215
>gi|449443255|ref|XP_004139395.1| PREDICTED: TIMELESS-interacting protein-like [Cucumis sativus]
Length = 280
Score = 237 bits (604), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 127/225 (56%), Positives = 152/225 (67%), Gaps = 17/225 (7%)
Query: 3 NAKAAPTGCFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASGGGGGGSGVGDGGVSVSK 62
NA APTGCFKCG+PGHWSRDCPSS+ + SN + + +S V
Sbjct: 6 NAVPAPTGCFKCGKPGHWSRDCPSSAPNPNPTSNSSTPSFSSPPAAPSKAV--------- 56
Query: 63 SAIGVKEKPKKLPRSRPKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLY 122
EKPKK PR+RPKLTP+LLLSDDGLG+VLRHFPRAFKYRGRGHE++DL +LIGLY
Sbjct: 57 ------EKPKKAPRTRPKLTPELLLSDDGLGYVLRHFPRAFKYRGRGHEINDLENLIGLY 110
Query: 123 SEWHSHLLPYYSFDHFVSKVEQVAASRRVKMCIRDLRDRVANGGDPTKLHEAAVEHDGPV 182
EWHSH+LPYYSF+HFV KVEQVAA++RVKMC+ +LR+RVA GGDPTK EA + +D
Sbjct: 111 REWHSHILPYYSFEHFVHKVEQVAATKRVKMCLGELRERVARGGDPTKWREAPILNDDDD 170
Query: 183 DEQAPAEAMSSERQPHQQDPAS--NVHAADDFNDLFNKVYRTATE 225
D EA + Q+ AS N A D D+ +VY ATE
Sbjct: 171 DVNNEKEAKDPDDVFDNQEEASLRNNGADDIEEDMLQEVYEKATE 215
>gi|255555549|ref|XP_002518811.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223542192|gb|EEF43736.1| nucleic acid binding protein, putative [Ricinus communis]
Length = 267
Score = 237 bits (604), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 129/240 (53%), Positives = 158/240 (65%), Gaps = 41/240 (17%)
Query: 1 MENAKAAPTGCFKCGRPGHWSRDCPSSSSSAPSN----------SNFPSNNTASGGGGGG 50
ME KAAPTGC+KCGRPGHWSRDCP S+S+ + ++FP+ +T S
Sbjct: 1 MEPGKAAPTGCYKCGRPGHWSRDCPDSNSNPNPSSSNPSNSKFPTSFPNTSTNSKP---- 56
Query: 51 SGVGDGGVSVSKSAIGVKEKPKKLPRSRPKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGH 110
V EKPKK+PRSRPKLTPD+LL DDGLG+VLRHFPR FKYRGRGH
Sbjct: 57 ----------------VAEKPKKVPRSRPKLTPDILLGDDGLGYVLRHFPRNFKYRGRGH 100
Query: 111 EVSDLGHLIGLYSEWHSHLLPYYSFDHFVSKVEQVAASRRVKMCIRDLRDRVANGGDPTK 170
EVSDLG+LI LYSEWHS LLPYYS+D FV KVEQVA+++RV++C+RDLR+RVA+GGDP K
Sbjct: 101 EVSDLGNLIRLYSEWHSRLLPYYSYDEFVHKVEQVASTKRVRVCLRDLRERVASGGDPMK 160
Query: 171 LHEAAVEHDGPVDEQAPAEAMSSERQPHQQD---PASNVHAAD-DFNDLFNKVYRTATEV 226
LHE+ E+ P EQ P + D P+S H AD + D+ ++ ATE
Sbjct: 161 LHESPPEYVDPKLEQ-------DHSIPTENDMGGPSSTNHDADVEQEDMLCDIFDRATEA 213
>gi|356540972|ref|XP_003538958.1| PREDICTED: LOW QUALITY PROTEIN: TIMELESS-interacting protein-like
[Glycine max]
Length = 309
Score = 232 bits (591), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 119/219 (54%), Positives = 147/219 (67%), Gaps = 11/219 (5%)
Query: 9 TGCFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASGGGGGGSGVGDGGVSVSKSAIGVK 68
TGC+KCG+PGHWSRDCP S+ P+ N S + S S +
Sbjct: 21 TGCYKCGKPGHWSRDCPFSA---------PNPNPNSNTATTPNPNTPNPSSSSFKSRSAT 71
Query: 69 EKPKKLPRSRPKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSH 128
EKPKKLPR++PKLTP+LLLSDDGLG+VLR+FPR FKYRGRGHEV DLG+L+ LY+EWHS
Sbjct: 72 EKPKKLPRTKPKLTPELLLSDDGLGYVLRYFPREFKYRGRGHEVRDLGNLLRLYTEWHSR 131
Query: 129 LLPYYSFDHFVSKVEQVAASRRVKMCIRDLRDRVANGGDPTKLHEAAVEHDGPVDEQAPA 188
LLPYYSF+ FV KVE+VAA+RRVK C+R+LR+RVA+GGDPTKL E V HD P DE +
Sbjct: 132 LLPYYSFNQFVHKVEKVAATRRVKTCLRELRERVASGGDPTKLREPPVVHDIPSDEHGFS 191
Query: 189 EAMSSERQPHQQ-DPASNVHAADDFN-DLFNKVYRTATE 225
+ HQ+ D + +D D+ N +Y ATE
Sbjct: 192 VSAEDGGATHQEADLFAEFENVNDIQEDMLNDIYDKATE 230
>gi|297828740|ref|XP_002882252.1| hypothetical protein ARALYDRAFT_896259 [Arabidopsis lyrata subsp.
lyrata]
gi|297328092|gb|EFH58511.1| hypothetical protein ARALYDRAFT_896259 [Arabidopsis lyrata subsp.
lyrata]
Length = 287
Score = 227 bits (579), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 118/239 (49%), Positives = 158/239 (66%), Gaps = 33/239 (13%)
Query: 5 KAAPTGCFKCGRPGHWSRDCPSSSSSAPS-------------NSNFPSNNTASGGGGGGS 51
++APTGCFKCGRPGHWSRDCPSS+ A + N+ F ++ SG G+
Sbjct: 2 ESAPTGCFKCGRPGHWSRDCPSSAPVAGNNSVSSSSGPSQIPNNEFQRSSNKSGNPAAGT 61
Query: 52 GVGDGGVSVSKSAIGVKEKPKKLPRSRPKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHE 111
+ V+K+ + RPKLTP+LLLS+DGLG+VLR+FP++FKYRGRG E
Sbjct: 62 SIA-PVPKVTKTRV-----------QRPKLTPELLLSEDGLGYVLRYFPKSFKYRGRGKE 109
Query: 112 VSDLGHLIGLYSEWHSHLLPYYSFDHFVSKVEQVAASRRVKMCIRDLRDRVANGGDPTKL 171
VSDLG+LI LYSEWHSHLLPYYSFDHFV KV+QVA+++RVK CI +LR+RVA+G DP KL
Sbjct: 110 VSDLGNLIRLYSEWHSHLLPYYSFDHFVHKVQQVASTKRVKNCINELRERVASGVDPNKL 169
Query: 172 HEAAVEHDGPVDEQAPAEAMSSERQPHQQDPASNVHA---ADDFND-LFNKVYRTATEV 226
+E E+ GP D+Q M Q + P+ + A AD F D + N+++ +A+++
Sbjct: 170 YEKPEENTGPYDDQ----DMDQPGQEEENIPSKSADADTNADAFEDSMLNEIFDSASQL 224
>gi|30678682|ref|NP_186931.2| CCHC-type zinc knuckle protein [Arabidopsis thaliana]
gi|26453004|dbj|BAC43578.1| putative CCHC-type zinc finger protein [Arabidopsis thaliana]
gi|106879191|gb|ABF82625.1| At3g02820 [Arabidopsis thaliana]
gi|332640342|gb|AEE73863.1| CCHC-type zinc knuckle protein [Arabidopsis thaliana]
Length = 282
Score = 224 bits (570), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 116/234 (49%), Positives = 154/234 (65%), Gaps = 28/234 (11%)
Query: 5 KAAPTGCFKCGRPGHWSRDCPSSSSSAPSNS--------NFPSNNTASGGGGGGSGVGDG 56
++APTGCFKCGRPGHWSRDCPSS+ A +NS P+N G+ +
Sbjct: 2 ESAPTGCFKCGRPGHWSRDCPSSAPVAGNNSVSSSSAPSQIPNNEFQRSSSKSGTSIA-P 60
Query: 57 GVSVSKSAIGVKEKPKKLPRSRPKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLG 116
V+K+ + RPKLTP+LLLS+DGLG+VLR+FP++FKYRGRG EVSDLG
Sbjct: 61 APKVTKTRV-----------QRPKLTPELLLSEDGLGYVLRYFPKSFKYRGRGKEVSDLG 109
Query: 117 HLIGLYSEWHSHLLPYYSFDHFVSKVEQVAASRRVKMCIRDLRDRVANGGDPTKLHEAAV 176
+LI LYSEWH+HLLPYYSFDHFV KV+QVA+++RVK CI +LR+RVA+G DP KL+E
Sbjct: 110 NLIRLYSEWHTHLLPYYSFDHFVHKVQQVASTKRVKNCINELRERVASGVDPNKLYEKQE 169
Query: 177 EHDGPVDEQAPAEAMSSERQPHQQDPASNVHA---ADDFND-LFNKVYRTATEV 226
E+ P D+Q M + P+ +V A AD F D + N+++ A+++
Sbjct: 170 ENTVPSDDQ----DMDQPSHDEENIPSKSVDADTNADAFEDSMLNEIFDNASKL 219
>gi|357473945|ref|XP_003607257.1| TIMELESS-interacting protein [Medicago truncatula]
gi|355508312|gb|AES89454.1| TIMELESS-interacting protein [Medicago truncatula]
Length = 286
Score = 223 bits (569), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 122/218 (55%), Positives = 149/218 (68%), Gaps = 10/218 (4%)
Query: 9 TGCFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASGGGGGGSGVGDGGVSVSKSAIGVK 68
TGC+KCGRPGHWSRDCP +S ++ SN N N T S S +SA+
Sbjct: 8 TGCYKCGRPGHWSRDCPFTSPASNSNLNPNPNATTSTADPPPP-TSTFKPSGPRSAV--- 63
Query: 69 EKPKKLPRSRPKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSH 128
EKPKK PR+RPKLTP+LLLSDDGLG+VLR+FPR FKY GRGHEV DLG L+ LYS+WHS
Sbjct: 64 EKPKKPPRTRPKLTPELLLSDDGLGYVLRYFPRNFKYHGRGHEVRDLGKLLHLYSDWHSR 123
Query: 129 LLPYYSFDHFVSKVEQVAASRRVKMCIRDLRDRVANGGDPTKLHEAAVEHDGPVDEQAPA 188
LLPYYSF+ FV+KVE+VAA+RRVK +R+LR+RVANGGDP+KL E V D P EQ
Sbjct: 124 LLPYYSFNQFVNKVEKVAATRRVKTSLRELRERVANGGDPSKLREPPVVDDVPDGEQENG 183
Query: 189 EAMSSERQPHQQ-DPASNVHAADDFNDLFNKVYRTATE 225
EA + + + + +N+ DLFN +Y ATE
Sbjct: 184 EASHQDNEMFAEPETVNNIQ-----EDLFNDIYDKATE 216
>gi|242097166|ref|XP_002439073.1| hypothetical protein SORBIDRAFT_10g031080 [Sorghum bicolor]
gi|241917296|gb|EER90440.1| hypothetical protein SORBIDRAFT_10g031080 [Sorghum bicolor]
Length = 321
Score = 200 bits (508), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 118/247 (47%), Positives = 147/247 (59%), Gaps = 28/247 (11%)
Query: 4 AKAAPTGCFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTAS---------GGGGGGSGVG 54
A AAPTGCFKCGRPGHWSRDCPS ++ AP+N PS AS G G
Sbjct: 2 AAAAPTGCFKCGRPGHWSRDCPSDAA-APTNPGHPSAAAASRFNAKPRPSAAAPEGDGTD 60
Query: 55 DGGVSVSKSAIGVKEKPKKLPRSRPKLTPDLLLSDDGLGFVLRHFPRAFKYRGR-GHEVS 113
G + G K+K ++ +RPKLTPDLLLSD G+GFVLR+ P+AFK R R GHEV
Sbjct: 61 GGAPPQPQDGKGKKKKKERA--TRPKLTPDLLLSDGGIGFVLRYLPKAFKPRARPGHEVE 118
Query: 114 DLGHLIGLYSEWHSHLLPYYSFDHFVSKVEQVAASRRVKMCIRDLRDRVANGGDPTKLHE 173
DLG+LI LY++WHS L+PYYSF+ FV KVE++ A RV+ C+ +LRDRVA GGDPT L+E
Sbjct: 119 DLGNLIKLYADWHSRLIPYYSFEQFVRKVEKLGAGNRVRRCVSELRDRVARGGDPTLLYE 178
Query: 174 AAVEHDGP---VDEQAPAEAMSSERQP----HQQDP----ASNVHAADDFN----DLFNK 218
V D P D AP + + P H DP A +D + DL N+
Sbjct: 179 PPVHEDMPEGEPDGTAPEDPIFGSEAPLSDNHVSDPVRGDADPPMETNDMDPMEEDLLNE 238
Query: 219 VYRTATE 225
+Y A +
Sbjct: 239 IYEKAAD 245
>gi|357117376|ref|XP_003560445.1| PREDICTED: uncharacterized protein LOC100821358 [Brachypodium
distachyon]
Length = 319
Score = 197 bits (502), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 120/244 (49%), Positives = 147/244 (60%), Gaps = 34/244 (13%)
Query: 4 AKAAPTGCFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASGGGGGGS---------GVG 54
A +APTGCFKCGRPGHWSRDCPS AP +S+ N T +G S
Sbjct: 2 AASAPTGCFKCGRPGHWSRDCPS----APPSSSTNPNPTTAGSSRFASFQPRQNPKPAAA 57
Query: 55 DGGVSVSKSAIGVKEKPKKLPRSRPKLTPDLLLSDDGLGFVLRHFPRAFKYR-GRGHEVS 113
+ + G K+K +K +RPKLTPDLLLSD GLGFVLR+FP+AFK R G GHEV
Sbjct: 58 AAAEGDAAAQEGGKKK-RKERATRPKLTPDLLLSDTGLGFVLRYFPKAFKPRAGPGHEVE 116
Query: 114 DLGHLIGLYSEWHSHLLPYYSFDHFVSKVEQVAASRRVKMCIRDLRDRVANGGDPTKLHE 173
DLG+LI LY++WHS L+PYYSF+ FV KVE+V AS RV+ CI +L+DRVA GGDPT+LHE
Sbjct: 117 DLGNLIKLYTDWHSRLIPYYSFEQFVRKVEKVGASNRVRRCISELKDRVARGGDPTQLHE 176
Query: 174 AAVEH-------DGPVDEQA-----PAEAMSSERQPHQQD-----PASNVHAADDFNDLF 216
VE DG E + P S + Q+D SNV A + DL
Sbjct: 177 PPVEEVMPEGEPDGATQEDSILGTEPPTTDSHVMESVQEDIDPPPVESNVDAMQE--DLL 234
Query: 217 NKVY 220
N++Y
Sbjct: 235 NEIY 238
>gi|115448845|ref|NP_001048202.1| Os02g0762200 [Oryza sativa Japonica Group]
gi|46805898|dbj|BAD17211.1| CCHC-type zinc finger protein-like [Oryza sativa Japonica Group]
gi|113537733|dbj|BAF10116.1| Os02g0762200 [Oryza sativa Japonica Group]
gi|215737375|dbj|BAG96304.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 324
Score = 197 bits (502), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 121/260 (46%), Positives = 147/260 (56%), Gaps = 40/260 (15%)
Query: 4 AKAAPTGCFKCGRPGHWSRDCPSSSSSA---------------PSNSNF-PSNNTASGGG 47
A A PTGC+KCGRPGHWSRDCPS + A PS S F P G
Sbjct: 2 AAAVPTGCYKCGRPGHWSRDCPSEPAGAGAASTDNPNPNPNPKPSASRFAPYPRPRFGKS 61
Query: 48 GGGSGVGDGGVSVSKSAIGVKEKPKKLPRSRPKLTPDLLLSDDGLGFVLRHFPRAFKYRG 107
+ +G A G K+K ++ +RPKLTPDLLLSDDGLGFVLR+FP+AFK R
Sbjct: 62 AAAAAAAEGEDGSGGQAQGKKKKKERA--TRPKLTPDLLLSDDGLGFVLRYFPKAFKPRA 119
Query: 108 R-GHEVSDLGHLIGLYSEWHSHLLPYYSFDHFVSKVEQVAASRRVKMCIRDLRDRVANGG 166
R GHEV DLG+LI LY++WHS L+PYYSFD FV KVE+V AS RV+ C+ +LRDRVA GG
Sbjct: 120 RPGHEVEDLGNLIKLYTDWHSRLIPYYSFDQFVRKVEKVGASNRVRRCVSELRDRVARGG 179
Query: 167 DPTKLHEAAVEHDGPVDEQAPAEAMSSERQPHQQDPASNVHAADDFN------------- 213
DPT LHE VE + E P A + + + PA+ H D
Sbjct: 180 DPTLLHEPPVEV---IPEGEPDGATAEDPIFGTEVPATENHGVDQVQEDIDIPVESNDVD 236
Query: 214 ----DLFNKVY-RTATEVSI 228
DL N++Y + A E I
Sbjct: 237 PMQEDLLNEIYNKEADEPQI 256
>gi|125541231|gb|EAY87626.1| hypothetical protein OsI_09037 [Oryza sativa Indica Group]
Length = 324
Score = 197 bits (500), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 107/191 (56%), Positives = 126/191 (65%), Gaps = 19/191 (9%)
Query: 4 AKAAPTGCFKCGRPGHWSRDCPSSSSSA---------------PSNSNF-PSNNTASGGG 47
A AAPTGC+KCGRPGHWSRDCPS + A PS S F P G
Sbjct: 2 AAAAPTGCYKCGRPGHWSRDCPSEPAGAGAASTDNPNPNPNPKPSASRFAPYPRPRFGKS 61
Query: 48 GGGSGVGDGGVSVSKSAIGVKEKPKKLPRSRPKLTPDLLLSDDGLGFVLRHFPRAFKYRG 107
+ +G A G K+K ++ +RPKLTPDLLLSDDGLGFVLR+FP+AFK R
Sbjct: 62 AAAAAAAEGEDGSGGQAQGKKKKKERA--TRPKLTPDLLLSDDGLGFVLRYFPKAFKPRA 119
Query: 108 R-GHEVSDLGHLIGLYSEWHSHLLPYYSFDHFVSKVEQVAASRRVKMCIRDLRDRVANGG 166
R GHEV DLG+LI LY++WHS L+PYYSFD FV KVE+V AS RV+ C+ +LRDRVA GG
Sbjct: 120 RPGHEVEDLGNLIKLYTDWHSRLIPYYSFDQFVRKVEKVGASNRVRRCVSELRDRVARGG 179
Query: 167 DPTKLHEAAVE 177
+PT LHE VE
Sbjct: 180 NPTLLHEPPVE 190
>gi|194693960|gb|ACF81064.1| unknown [Zea mays]
gi|195619640|gb|ACG31650.1| nucleic acid binding protein [Zea mays]
gi|195636128|gb|ACG37532.1| nucleic acid binding protein [Zea mays]
gi|413935088|gb|AFW69639.1| nucleic acid binding protein [Zea mays]
Length = 312
Score = 193 bits (490), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 99/181 (54%), Positives = 124/181 (68%), Gaps = 2/181 (1%)
Query: 4 AKAAPTGCFKCGRPGHWSRDCPSSSSS-APSNSNFPSNNTASGGGGGGSGVGDGGVSVSK 62
A PTGCFKCGRPGHWSRDCPSS+S+ P+ ++ P+N + G + +
Sbjct: 2 AAPPPTGCFKCGRPGHWSRDCPSSASTNPPAAADAPTNPSHLSGAASRFNAKPRPPAAAV 61
Query: 63 SAIGVKEKPKKLPRSRPKLTPDLLLSDDGLGFVLRHFPRAFKYRGR-GHEVSDLGHLIGL 121
K K KK +RPKLTPDLLLSD G+GFVLR+FP+AFK R R GHEV DL +LI L
Sbjct: 62 DGEDGKGKKKKERATRPKLTPDLLLSDGGIGFVLRYFPKAFKPRARPGHEVDDLANLIKL 121
Query: 122 YSEWHSHLLPYYSFDHFVSKVEQVAASRRVKMCIRDLRDRVANGGDPTKLHEAAVEHDGP 181
Y++WHS L+PYYSF+ FV K+E++ A RV+ C+ +LRDRVA GGDPT LHE V D P
Sbjct: 122 YADWHSRLIPYYSFEQFVRKLEKLGAGNRVRRCVSELRDRVARGGDPTLLHEPPVHEDMP 181
Query: 182 V 182
+
Sbjct: 182 L 182
>gi|357123050|ref|XP_003563226.1| PREDICTED: uncharacterized protein LOC100834083 [Brachypodium
distachyon]
Length = 328
Score = 193 bits (490), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 107/192 (55%), Positives = 128/192 (66%), Gaps = 11/192 (5%)
Query: 4 AKAAPTGCFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASGG----------GGGGSGV 53
A +APTGCFKCGRPGHWSRDCPS+ S+ S + P+N TA G
Sbjct: 2 AASAPTGCFKCGRPGHWSRDCPSAPPSSSSANPNPTNPTAGAGPSRFASFKPRQNPKPAA 61
Query: 54 GDGGVSVSKSAIGVKEKPKKLPRSRPKLTPDLLLSDDGLGFVLRHFPRAFKYRGR-GHEV 112
G ++A +K +K +RPKLTPDLLLSD GLGFVLR+FP+AFK R R GHEV
Sbjct: 62 AAEGEGEEQAAQEGGKKKRKERATRPKLTPDLLLSDAGLGFVLRYFPKAFKPRARPGHEV 121
Query: 113 SDLGHLIGLYSEWHSHLLPYYSFDHFVSKVEQVAASRRVKMCIRDLRDRVANGGDPTKLH 172
DLGHLI LY++W S L+PYYSF+ FV KVE+V S RV+ CI +L+DRVANGGDPT+LH
Sbjct: 122 EDLGHLIKLYADWQSRLIPYYSFEQFVRKVEKVGVSNRVRRCISELKDRVANGGDPTQLH 181
Query: 173 EAAVEHDGPVDE 184
E VE P E
Sbjct: 182 EPPVEQVIPEGE 193
>gi|294463606|gb|ADE77331.1| unknown [Picea sitchensis]
Length = 297
Score = 191 bits (485), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 101/218 (46%), Positives = 136/218 (62%), Gaps = 17/218 (7%)
Query: 7 APTGCFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASGGGGGGSGVGDGGVSVSKSAIG 66
APTGC+KCGR GHWSRDC + APS S P N S GG + +++
Sbjct: 15 APTGCYKCGRAGHWSRDC----TFAPSTSKPP--NFPSSAAGGKQQQQQETIPSAEAP-- 66
Query: 67 VKEKPKKLPRSRPKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWH 126
K KK PR+RPKLTPDLLLS++GLG+VL PR +RG GHEVSDLG+LI + +WH
Sbjct: 67 ---KVKKPPRTRPKLTPDLLLSNNGLGYVLEQIPRMLHFRGPGHEVSDLGNLIEAFIQWH 123
Query: 127 SHLLPYYSFDHFVSKVEQVAASRRVKMCIRDLRDRVANGGDPTKLHEAAVEHDGPVDEQA 186
S LLP SF +FV +VE+V +++RV+ C+R+LR+RVA G +P LHE VE PVD+
Sbjct: 124 SRLLPSVSFQNFVDRVEKVGSTKRVRTCLRELRERVARGENPKTLHEPPVERTSPVDD-- 181
Query: 187 PAEAMSSERQPHQQDPASNVHAADDFNDLFNKVYRTAT 224
++ + + +D +V D DLF+++YR A
Sbjct: 182 ----VTGDGEVGLEDLNKDVADDDIQEDLFDELYRQAV 215
>gi|212721418|ref|NP_001131345.1| uncharacterized protein LOC100192665 [Zea mays]
gi|194691256|gb|ACF79712.1| unknown [Zea mays]
Length = 348
Score = 180 bits (457), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 93/172 (54%), Positives = 118/172 (68%), Gaps = 2/172 (1%)
Query: 13 KCGRPGHWSRDCPSSSSS-APSNSNFPSNNTASGGGGGGSGVGDGGVSVSKSAIGVKEKP 71
KCGRPGHWSRDCPSS+S+ P+ ++ P+N + G + + K K
Sbjct: 47 KCGRPGHWSRDCPSSASTNPPAAADAPTNPSHLSGAASRFNAKPRPPAAAVDGEDGKGKK 106
Query: 72 KKLPRSRPKLTPDLLLSDDGLGFVLRHFPRAFKYRGR-GHEVSDLGHLIGLYSEWHSHLL 130
KK +RPKLTPDLLLSD G+GFVLR+FP+AFK R R GHEV DL +LI LY++WHS L+
Sbjct: 107 KKERATRPKLTPDLLLSDGGIGFVLRYFPKAFKPRARPGHEVDDLANLIKLYADWHSRLI 166
Query: 131 PYYSFDHFVSKVEQVAASRRVKMCIRDLRDRVANGGDPTKLHEAAVEHDGPV 182
PYYSF+ FV K+E++ A RV+ C+ +LRDRVA GGDPT LHE V D P+
Sbjct: 167 PYYSFEQFVRKLEKLGAGNRVRRCVSELRDRVARGGDPTLLHEPPVHEDMPL 218
>gi|6728980|gb|AAF26978.1|AC018363_23 putative CCHC-type zinc finger protein [Arabidopsis thaliana]
Length = 326
Score = 179 bits (453), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 99/234 (42%), Positives = 137/234 (58%), Gaps = 47/234 (20%)
Query: 5 KAAPTGCFKCGRPGHWSRDCPSSSSSAPSNS--------NFPSNNTASGGGGGGSGVGDG 56
++APTGCFKCGRPGHWSRDCPSS+ A +NS P+N G+ +
Sbjct: 65 ESAPTGCFKCGRPGHWSRDCPSSAPVAGNNSVSSSSAPSQIPNNEFQRSSSKSGTSIA-P 123
Query: 57 GVSVSKSAIGVKEKPKKLPRSRPKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLG 116
V+K+ + RPKLTP+LLLS+DGLG+VLR+FP++F
Sbjct: 124 APKVTKTRV-----------QRPKLTPELLLSEDGLGYVLRYFPKSF------------- 159
Query: 117 HLIGLYSEWHSHLLPYYSFDHFVSKVEQVAASRRVKMCIRDLRDRVANGGDPTKLHEAAV 176
+EWH+HLLPYYSFDHFV KV+QVA+++RVK CI +LR+RVA+G DP KL+E
Sbjct: 160 ------NEWHTHLLPYYSFDHFVHKVQQVASTKRVKNCINELRERVASGVDPNKLYEKQE 213
Query: 177 EHDGPVDEQAPAEAMSSERQPHQQDPASNVHA---ADDFND-LFNKVYRTATEV 226
E+ P D+Q M + P+ +V A AD F D + N+++ A+++
Sbjct: 214 ENTVPSDDQ----DMDQPSHDEENIPSKSVDADTNADAFEDSMLNEIFDNASKL 263
>gi|222623719|gb|EEE57851.1| hypothetical protein OsJ_08481 [Oryza sativa Japonica Group]
Length = 671
Score = 162 bits (411), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 82/139 (58%), Positives = 99/139 (71%), Gaps = 4/139 (2%)
Query: 77 SRPKLTPDLLLSDDGLGFVLRHFPRAFKYRGR-GHEVSDLGHLIGLYSEWHSHLLPYYSF 135
+RPKLTPDLLLSDDGLGFVLR+FP+AFK R R GHEV DLG+LI LY++WHS L+PYYSF
Sbjct: 436 TRPKLTPDLLLSDDGLGFVLRYFPKAFKPRARPGHEVEDLGNLIKLYTDWHSRLIPYYSF 495
Query: 136 DHFVSKVEQVAASRRVKMCIRDLRDRVANGGDPTKLHEAAVEHDGPVDEQAPAEAMSSER 195
D FV KVE+V AS RV+ C+ +LRDRVA GGDPT LHE VE + E P A + +
Sbjct: 496 DQFVRKVEKVGASNRVRRCVSELRDRVARGGDPTLLHEPPVEV---IPEGEPDGATAEDP 552
Query: 196 QPHQQDPASNVHAADDFND 214
+ PA+ H D +
Sbjct: 553 IFGTEVPATENHGVDQVQE 571
>gi|168067946|ref|XP_001785861.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662474|gb|EDQ49324.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 296
Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 81/168 (48%), Positives = 105/168 (62%), Gaps = 14/168 (8%)
Query: 9 TGCFKCGRPGHWSRDCPSSSSS---APSNSNFPSNNTASGGGGGGSGVGDGGVSVSK--- 62
TGC+KCG+PGHWSRDCPS +S P +++ PS++ GG+ G +
Sbjct: 8 TGCYKCGKPGHWSRDCPSQPASENPTPGSASVPSSSGVFAAAKGGTQASTQGFKRKEPWR 67
Query: 63 -----SAIGVKEKPKKL---PRSRPKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSD 114
+ G +EKP K PR PKLTPDLLL DDGLG+VL PR RGRGHEV D
Sbjct: 68 GGEKSGSFGPREKPAKARVPPRRMPKLTPDLLLGDDGLGYVLEKIPRQVNIRGRGHEVED 127
Query: 115 LGHLIGLYSEWHSHLLPYYSFDHFVSKVEQVAASRRVKMCIRDLRDRV 162
L L+ Y WH +LLPYYSF FV KVE+V +++RV++C+R+LR +V
Sbjct: 128 LKSLLEAYVRWHQNLLPYYSFSQFVEKVEKVGSTKRVRLCVRELRSKV 175
>gi|413935076|gb|AFW69627.1| hypothetical protein ZEAMMB73_456689, partial [Zea mays]
Length = 204
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 52/80 (65%), Positives = 66/80 (82%), Gaps = 1/80 (1%)
Query: 77 SRPKLTPDLLLSDDGLGFVLRHFPRAFKYRGR-GHEVSDLGHLIGLYSEWHSHLLPYYSF 135
+RPKLTPDLLLSD G+GFVLR+FP+AFK R R GHEV DL +LI LY++WHS L+PYYSF
Sbjct: 9 TRPKLTPDLLLSDGGIGFVLRYFPKAFKPRPRPGHEVDDLANLIKLYADWHSRLIPYYSF 68
Query: 136 DHFVSKVEQVAASRRVKMCI 155
+ FV K+E++ A RV+ C+
Sbjct: 69 EQFVRKLEKLGAGNRVRRCV 88
>gi|302815019|ref|XP_002989192.1| hypothetical protein SELMODRAFT_427792 [Selaginella moellendorffii]
gi|300143092|gb|EFJ09786.1| hypothetical protein SELMODRAFT_427792 [Selaginella moellendorffii]
Length = 231
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/205 (34%), Positives = 94/205 (45%), Gaps = 28/205 (13%)
Query: 7 APTGCFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASGGGGGGSGVGDGGVSVSKSAIG 66
APTGC+KCGR GHWSRDC P ++ G
Sbjct: 4 APTGCYKCGRTGHWSRDCTFDPKPGLPPPPPPPISSVPPPKSGR---------------- 47
Query: 67 VKEKPKKLPRSRPKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWH 126
R + KLTP+LL S++GLG+VL H P F +GRGHE DL +L+ Y WH
Sbjct: 48 ---------RRKRKLTPELLFSNEGLGYVLEHIPHRFPIKGRGHEGRDLHNLLRAYRHWH 98
Query: 127 SHLLPYYSFDHFVSKVEQVAASRRVKMCIRDLRDRVANGGDPTKLHEAAVEHDGPVDEQA 186
S+ P SF F +V +V RRVK +++ R + G D K ++ D P +
Sbjct: 99 SNFFPSLSFKRFAREVAKVGRLRRVKKRLKECRTKFFKGVDDPK---DCLKEDLPEPDIP 155
Query: 187 PAEAMSSERQPHQQDPASNVHAADD 211
EA + Q + P SN + DD
Sbjct: 156 SQEAPVQDNQNYTPIPISNPVSKDD 180
>gi|302811201|ref|XP_002987290.1| hypothetical protein SELMODRAFT_426137 [Selaginella moellendorffii]
gi|300144925|gb|EFJ11605.1| hypothetical protein SELMODRAFT_426137 [Selaginella moellendorffii]
Length = 232
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/185 (37%), Positives = 88/185 (47%), Gaps = 28/185 (15%)
Query: 7 APTGCFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASGGGGGGSGVGDGGVSVSKSAIG 66
APTGC+KCGR GHWSRDC P ++A G
Sbjct: 4 APTGCYKCGRTGHWSRDCSFDPKPGLPPPPPPPISSAPPPKPGR---------------- 47
Query: 67 VKEKPKKLPRSRPKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWH 126
R + KLTP+LL S++GLG+VL H P F +GRGHE DL +L+ Y WH
Sbjct: 48 ---------RRKRKLTPELLFSNEGLGYVLEHIPHRFPIKGRGHEGRDLHNLLRAYRHWH 98
Query: 127 SHLLPYYSFDHFVSKVEQVAASRRVKMCIRDLRDRVANGGDPTK--LHEAAVEHDGPVDE 184
S+ P SF F +V +V RRVK +++ R + G D K L E E D P E
Sbjct: 99 SNFFPSLSFKRFAREVAKVGRLRRVKKRLKECRTKFFKGVDDPKDCLKEDLPEPDIPSQE 158
Query: 185 QAPAE 189
AP +
Sbjct: 159 -APVQ 162
>gi|303282205|ref|XP_003060394.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226457865|gb|EEH55163.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 518
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 89/198 (44%), Gaps = 33/198 (16%)
Query: 11 CFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASGGGGGG-SGVGDGGVSVSKSAIGVKE 69
CFKCG+ GHWSRDC AP P + SG + + D +
Sbjct: 25 CFKCGKTGHWSRDC-----VAPREEWIPRDQQPSGADADAEAAMNDAEGGGAMGGGAGGA 79
Query: 70 KPKKLPRS------RPKLTP-DLLLSDDGLGFVLRHFPRAFKYR---------------- 106
KL +S +PK T D LL +G+ +V P +K R
Sbjct: 80 PAVKLTKSGKPSTRKPKFTVVDHLLGPNGIAYVYNVIPEKYKARSIHWFPYDRVGVAIRK 139
Query: 107 GRGHEVSDLGHLIGLYSEWHSHLLPYYSFDHFVSKVEQVAASRRVKMCIRDL--RDRVAN 164
G GHE+ D L+ LY EW + + PY + + KVE++ +R V+ CI +L RDR+AN
Sbjct: 140 GPGHELGDFARLMSLYREWTTLMYPYAPHEEVMKKVERLKKTREVRACIAELKERDRIAN 199
Query: 165 GGDPTKLHEAAVEHDGPV 182
GGDP A E DG V
Sbjct: 200 GGDPADA--PAPEEDGDV 215
>gi|307108634|gb|EFN56874.1| hypothetical protein CHLNCDRAFT_144509 [Chlorella variabilis]
Length = 611
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 90/200 (45%), Gaps = 44/200 (22%)
Query: 1 MENA------KAAPTGCFKCGRPGHWSRDCPSSSSS----APSNSNFPSNNTASGGGGGG 50
M+NA AP GC+KCG+ GHWSRDC S P +P+ A G G
Sbjct: 1 MQNAARAAPGSTAPKGCYKCGQAGHWSRDCTVPQSQWLPRQPPPGGWPARTPAGGAPGAT 60
Query: 51 SGV---------------GDGGVSVSKSAIGVKEKPKKLPRSRPKLT-----------PD 84
G+ G + +A KEK R RPKLT P
Sbjct: 61 PAAGDAAAGGEPDPFNLEGEQG-PLQTAAAARKEK-----RKRPKLTLELMQAAPPAWPG 114
Query: 85 LLLSDDGLGFVLRHFPRAFK--YRGRGHEVSDLGHLIGLYSEWHSHLLPYYSFDHFVSKV 142
L GL V+ +FP AF+ ++G+GHE SDL L+ +Y W + P+ +D F+ V
Sbjct: 115 ALQGSKGLPDVITNFPDAFRRQFKGKGHEASDLRRLLEMYKRWQDRVFPHGDYDAFICTV 174
Query: 143 EQVAASRRVKMCIRDLRDRV 162
E+++ + +K + D R R+
Sbjct: 175 ERLSGTNALKSHMHDTRMRL 194
>gi|255085588|ref|XP_002505225.1| predicted protein [Micromonas sp. RCC299]
gi|226520494|gb|ACO66483.1| predicted protein [Micromonas sp. RCC299]
Length = 491
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 80/174 (45%), Gaps = 10/174 (5%)
Query: 11 CFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASGGGGGGSGVGDGGVSVSKSAIGVKEK 70
C+KCG+ GHWSRDC +AP P + G G + + SA
Sbjct: 53 CYKCGKTGHWSRDC-----TAPREEWIPQQPRDASAGTAADGDANPEGAAGGSAAAGGAT 107
Query: 71 PKKLPRSRPKLTP-DLLLSDDGLGFVLRHFPRAFKY--RGRGHEVSDLGHLIGLYSEWHS 127
KK PK T D LL +GL ++ P F +G GHE D L+GLY EW
Sbjct: 108 GKKKSNRPPKFTVVDHLLGPNGLAYLHGVIPEKFNQIAKGPGHEFGDFQRLMGLYREWTR 167
Query: 128 HLLPYYSFDHFVSKVEQVAASRRVKMCIRDL--RDRVANGGDPTKLHEAAVEHD 179
+ PY + +++V+ + +R + CIR+L R+R+ GG+ E E D
Sbjct: 168 KMYPYKPHEWVMNRVKVLCKTREARACIRELNERERIELGGEGVDAPEDFTEED 221
>gi|384248183|gb|EIE21668.1| hypothetical protein COCSUDRAFT_56864 [Coccomyxa subellipsoidea
C-169]
Length = 739
Score = 86.7 bits (213), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 78/161 (48%), Gaps = 17/161 (10%)
Query: 10 GCFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASGGGGGGSGVGDGGVSVSKSAIGVKE 69
GCFKCG+ GHWSRDC +AP + P +G + K A K
Sbjct: 86 GCFKCGKTGHWSRDC-----TAPPSEQLPRAPFNAGALPAAEPDLPSASNAVKPAPARKA 140
Query: 70 KPKKLPRSRPKLTPDLLLSDDG---------LGFVLRHFPRAF--KYRGRGHEVSDLGHL 118
KK PR R +L +S+ G +G V FP F +++G+GHEVSDL L
Sbjct: 141 DAKK-PRKRKIRFEELTVSEMGAPGMQEKNAIGEVFCQFPDRFARQFKGKGHEVSDLRKL 199
Query: 119 IGLYSEWHSHLLPYYSFDHFVSKVEQVAASRRVKMCIRDLR 159
+ +Y +W P + FD + ++ + S R+K+ +R++R
Sbjct: 200 LEMYKDWQRKFFPLHGFDEAMHQIADLGRSNRLKVELREMR 240
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/22 (68%), Positives = 17/22 (77%), Gaps = 2/22 (9%)
Query: 5 KAAPTG--CFKCGRPGHWSRDC 24
+A P G CFKCG+ GHWSRDC
Sbjct: 2 QAPPAGVACFKCGKTGHWSRDC 23
>gi|147777299|emb|CAN66801.1| hypothetical protein VITISV_015403 [Vitis vinifera]
Length = 965
Score = 84.0 bits (206), Expect = 5e-14, Method: Composition-based stats.
Identities = 35/44 (79%), Positives = 40/44 (90%)
Query: 110 HEVSDLGHLIGLYSEWHSHLLPYYSFDHFVSKVEQVAASRRVKM 153
HEVSDLG+LIGLYSEWHSHLLPYYSFD FV KVE+V ++RVK+
Sbjct: 21 HEVSDLGNLIGLYSEWHSHLLPYYSFDQFVHKVEKVGTTKRVKL 64
>gi|145345762|ref|XP_001417369.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577596|gb|ABO95662.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 354
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 76/168 (45%), Gaps = 15/168 (8%)
Query: 11 CFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASGGG---------GGGSGVGDGGVSVS 61
C+KCG+ GHW++DC S + T G GG G G G
Sbjct: 8 CYKCGQGGHWAKDCTVPRERWISKEASDALKTREDGATTTTTDDVEGGARGEGSGD---D 64
Query: 62 KSAIGVKEKPKKLPRSRPKLTP-DLLLSDDGLGFVLRHFPRAFKYR--GRGHEVSDLGHL 118
+ A K K RPK + D LL +GLG + R FP F R G GHE D+ L
Sbjct: 65 RGARAEKRKSSAGTTRRPKFSVHDHLLGPNGLGAMYREFPEKFAARSKGEGHEEHDMNLL 124
Query: 119 IGLYSEWHSHLLPYYSFDHFVSKVEQVAASRRVKMCIRDLRDRVANGG 166
+Y EW + PY + +++V+++ + + VKM +R+ + GG
Sbjct: 125 ATMYKEWAVKMYPYAPAEETLARVDKLQSDKSVKMAVREFNELDFGGG 172
>gi|302833519|ref|XP_002948323.1| hypothetical protein VOLCADRAFT_103804 [Volvox carteri f.
nagariensis]
gi|300266543|gb|EFJ50730.1| hypothetical protein VOLCADRAFT_103804 [Volvox carteri f.
nagariensis]
Length = 665
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 54/97 (55%), Gaps = 3/97 (3%)
Query: 66 GVKEKPKKLPRSR-PKLTPDLLLSDDGLGFVLRHFPRAFK--YRGRGHEVSDLGHLIGLY 122
G KP + PR + PKL DLL +D G + AFK ++G GHEV+DL L+ LY
Sbjct: 35 GAAVKPARAPRKKDPKLDLDLLEADGGFNDIWHKMAPAFKASFQGEGHEVADLRRLLELY 94
Query: 123 SEWHSHLLPYYSFDHFVSKVEQVAASRRVKMCIRDLR 159
W + P+ FD FV+K+E+ SR VK + +R
Sbjct: 95 QRWQTRFYPHCDFDTFVTKLEKAGRSRLVKAKMGSMR 131
>gi|159465347|ref|XP_001690884.1| predicted protein [Chlamydomonas reinhardtii]
gi|158279570|gb|EDP05330.1| predicted protein [Chlamydomonas reinhardtii]
Length = 540
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 56/100 (56%), Gaps = 3/100 (3%)
Query: 66 GVKEKPKKLPRSR-PKLTPDLLLSDDGLGFVLRHFPRAFK--YRGRGHEVSDLGHLIGLY 122
GV +KP + PR + PKL DLL ++ G V AFK ++G GHEV+DL L+ LY
Sbjct: 54 GVPDKPARQPRKKDPKLDLDLLEANGGFNDVWHTIAPAFKASFQGEGHEVADLRRLLELY 113
Query: 123 SEWHSHLLPYYSFDHFVSKVEQVAASRRVKMCIRDLRDRV 162
W P+ FD FV+K+E+ SR +K + +R +
Sbjct: 114 QRWQMRFYPHCDFDTFVTKLEKSGRSRAIKSKMHSMRQNL 153
>gi|392595819|gb|EIW85142.1| Swi3-domain-containing protein [Coniophora puteana RWD-64-598 SS2]
Length = 411
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 90/192 (46%), Gaps = 14/192 (7%)
Query: 37 FPSNNTASGGGGGGSGVGDGGVSVSKSAIGVKEKPKKLPRSRPKLTPDLLLSDDGLGFVL 96
PS++ A G + G+ V K G K K R KL LL DG ++
Sbjct: 113 LPSSSPARGNDLTDNENGNQRVDKEKETDGKKSK-----RKLAKLDEGRLLGPDGFPQLI 167
Query: 97 RHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHLLPYYSFDHFVSKVEQVAASRRVKMCIR 156
R + F+ RG+GHE+SDLG L+ +Y W + P SF V KVE+V S+R+++ +
Sbjct: 168 RDT-KHFQARGKGHEMSDLGRLLRIYQFWTHKMHPKGSFKDNVEKVEKVCHSKRMQVALS 226
Query: 157 DLRDR---VANGGDPTKLHEAAVEHDGPVDEQAPAEAMSSERQPHQQDPASNVHAADDFN 213
RD + NG P E DG Q PAE R + P S++HA +DF+
Sbjct: 227 VWRDEAKGLVNGKRPDDEPLEIPEEDGDEVVQTPAE---DRRSSNPTSPPSSIHADNDFD 283
Query: 214 DLFNKVYRTATE 225
++V R E
Sbjct: 284 --IDEVIRQEEE 293
>gi|126277459|ref|XP_001376003.1| PREDICTED: TIMELESS-interacting protein-like [Monodelphis
domestica]
Length = 286
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 71/156 (45%), Gaps = 16/156 (10%)
Query: 49 GGSGVGDGGVSVSKSAIGVKEKP----KKLPRSRPKLTPDLLLSDDGLGFVLRHFPRAFK 104
G G+ ++ S + E P K + R+ PKL L+S+ GL LRH K
Sbjct: 32 GRDDAGENELTTDTSRNQMGEMPVVIKKTVKRNLPKLDAQRLISERGLP-ALRHVFEKVK 90
Query: 105 YRGRGHEVSDLGHLIGLYSEWHSHLLPYYSFDHFVSKVEQVAASRRVKMCIRDLR----- 159
++G+GHE DL LI W L P F+ F+ +VE + + V+ C++ +R
Sbjct: 91 FKGKGHEAEDLKTLIRHMEHWAHRLFPKLQFEDFIGRVEHLGNKKEVQTCLKRIRLDLPI 150
Query: 160 ---DRVANGGDPTK---LHEAAVEHDGPVDEQAPAE 189
D ++N GD T+ + A V+ D Q E
Sbjct: 151 IHEDFISNDGDKTEGNGVDTATVDFDSLFSNQVDTE 186
>gi|403417922|emb|CCM04622.1| predicted protein [Fibroporia radiculosa]
Length = 441
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 62/126 (49%), Gaps = 9/126 (7%)
Query: 37 FPSNNTASGGGGGGSG-VGDGGVSVSKSAIGVKEKPKKLPRSRPKLTPDLLLSDDGLGFV 95
FP G G G +GDG SK G KEK K LP KL LL DG +
Sbjct: 111 FPEGTPLDGVSGSTQGNLGDGE---SKEEKGAKEKRKPLP----KLDEARLLGPDGFPTL 163
Query: 96 LRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHLLPYYSFDHFVSKVEQVAASRRVKMCI 155
++ + FK +G+GHEV+DL L+ +Y W + P F V +VE++ S+R+ + +
Sbjct: 164 VKQV-KNFKPKGKGHEVTDLNRLLQVYQFWGHKMYPKMPFRDTVQRVEKLCHSKRMNVAL 222
Query: 156 RDLRDR 161
RD
Sbjct: 223 SVWRDE 228
>gi|443703840|gb|ELU01205.1| hypothetical protein CAPTEDRAFT_225346 [Capitella teleta]
gi|443703842|gb|ELU01207.1| hypothetical protein CAPTEDRAFT_225347 [Capitella teleta]
Length = 307
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 53/88 (60%), Gaps = 1/88 (1%)
Query: 72 KKLPRSRPKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHLLP 131
+++ + +PKL L S+ GL +L+ F + K++GRGHEVSDL ++ W L P
Sbjct: 64 QRVSKPQPKLDAQRLKSNRGLPGLLKTFEK-VKFKGRGHEVSDLRLMMNHMEHWGHRLFP 122
Query: 132 YYSFDHFVSKVEQVAASRRVKMCIRDLR 159
+FD F+S++E++ R ++ C+ +R
Sbjct: 123 KMTFDEFISRLEKLGNKREMRTCLSRIR 150
>gi|393245414|gb|EJD52924.1| Swi3-domain-containing protein [Auricularia delicata TFB-10046 SS5]
Length = 462
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 57/108 (52%), Gaps = 5/108 (4%)
Query: 58 VSVSKSAIGVKEKPKKLPRSRPKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGH 117
+ K A G +K K +P KL + LL DG +L+ + + FK +G+GHE DL
Sbjct: 118 MKAQKKAEGELKKRKPIP----KLNDERLLGQDGFPALLKEY-KNFKPKGKGHEQEDLTR 172
Query: 118 LIGLYSEWHSHLLPYYSFDHFVSKVEQVAASRRVKMCIRDLRDRVANG 165
L+ +Y W + P FD V+++E+V SRR+ + + +D NG
Sbjct: 173 LLQMYQFWTHKMFPKMQFDDAVNRIEKVCHSRRMLISMSVWKDEAKNG 220
>gi|426379460|ref|XP_004056415.1| PREDICTED: TIMELESS-interacting protein isoform 1 [Gorilla gorilla
gorilla]
gi|426379462|ref|XP_004056416.1| PREDICTED: TIMELESS-interacting protein isoform 2 [Gorilla gorilla
gorilla]
Length = 301
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 73/155 (47%), Gaps = 8/155 (5%)
Query: 43 ASGGGGGGSGVGDGGVSVSKSAIGVKEKPKKLPRSRPKLTPDLLLSDDGLGFVLRHFPRA 102
AS GG G S + + + V K + + R+ PKL L+S+ GL LRH
Sbjct: 30 ASPERQGGEGTEPDEESGNGAPVPVPPK-RTVKRNIPKLDAQRLISERGLP-ALRHVFDK 87
Query: 103 FKYRGRGHEVSDLGHLIGLYSEWHSHLLPYYSFDHFVSKVEQVAASRRVKMCIRDLRDRV 162
K++G+GHE DL LI W L P F+ F+ +VE + + + V+ C++ +R
Sbjct: 88 AKFKGKGHEAEDLKMLIRHMEHWAHRLFPKLQFEDFIDRVEYLGSKKEVQTCLKRIR--- 144
Query: 163 ANGGDPTKLHEAAVEHDGPVDEQAPAEAMSSERQP 197
D LHE V ++ V E + S+E P
Sbjct: 145 ---LDVPILHEDFVSNNDEVAENNEHDVTSTELDP 176
>gi|410912586|ref|XP_003969770.1| PREDICTED: TIMELESS-interacting protein-like [Takifugu rubripes]
Length = 308
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 57/122 (46%), Gaps = 3/122 (2%)
Query: 38 PSNNTASGGGGGGSGVGDGGVSVSKSAIGVKEKPKKLPRSRPKLTPDLLLSDDGLGFVLR 97
P A G +G GDG VS K K K P+ PKL L+SD GL LR
Sbjct: 21 PGQGRAEEGDLMENGEGDGDVSKLAEVPAAKRKGVKRPQ--PKLDSQRLISDRGLP-ALR 77
Query: 98 HFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHLLPYYSFDHFVSKVEQVAASRRVKMCIRD 157
++G+GHE DL L+ W L P F+ F+ KVE++ + V+ C++
Sbjct: 78 TLFDNVHFKGKGHEAEDLRLLMQKMENWAHRLFPKLQFEEFIDKVERLGKKKEVQTCLKR 137
Query: 158 LR 159
+R
Sbjct: 138 IR 139
>gi|344293515|ref|XP_003418468.1| PREDICTED: TIMELESS-interacting protein-like [Loxodonta africana]
Length = 278
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 64/128 (50%), Gaps = 8/128 (6%)
Query: 71 PKK-LPRSRPKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHL 129
PK+ + R+ PKL L+S+ GL LRH K++G+GHE DL LI W L
Sbjct: 48 PKRTIKRNIPKLDAQRLISERGLP-ALRHVFDKAKFKGKGHEAEDLKKLIRHMEHWAHRL 106
Query: 130 LPYYSFDHFVSKVEQVAASRRVKMCIRDLRDRVANGGDPTKLHEAAVEHDGPVDEQAPAE 189
P F+ F+ +VEQ+ + V+ C++ +R D LHE V ++ V E +
Sbjct: 107 FPKLQFEDFIDRVEQLGNKKEVQTCLKRIR------LDLPILHEDFVNNNDEVGENNEDD 160
Query: 190 AMSSERQP 197
++E P
Sbjct: 161 VTAAELDP 168
>gi|449471787|ref|XP_004176987.1| PREDICTED: TIMELESS-interacting protein [Taeniopygia guttata]
Length = 476
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 56/119 (47%), Gaps = 4/119 (3%)
Query: 41 NTASGGGGGGSGVGDGGVSVSKSAIGVKEKPKKLPRSRPKLTPDLLLSDDGLGFVLRHFP 100
+ A G G+ SA+ + K + R RP+L L+S+ G+ LRH
Sbjct: 239 DDAEWAQANGDPDGNQQSQTKDSAVTTQ---KAVKRPRPRLDAQRLISERGIP-ALRHMF 294
Query: 101 RAFKYRGRGHEVSDLGHLIGLYSEWHSHLLPYYSFDHFVSKVEQVAASRRVKMCIRDLR 159
K++G+GHE DL LI W L P F+ F+ +VE + + V+ C++ +R
Sbjct: 295 DNVKFKGKGHEAEDLKTLIQHMEHWAHRLFPQLRFEDFIDRVESLGNKKEVQTCLKRIR 353
>gi|432958668|ref|XP_004086098.1| PREDICTED: TIMELESS-interacting protein-like [Oryzias latipes]
Length = 311
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 66/142 (46%), Gaps = 17/142 (11%)
Query: 42 TASGGGGGGSGVGDGGVSVSKSAIGVKEKPKKLPRSRPKLTPDLLLSDDGLGFVLRHFPR 101
+A G G SG+ D + KSA R +PKL + L+S+ GL LR +
Sbjct: 41 SADGEEGEVSGLADVPAAKRKSAK----------RPQPKLDSNRLISERGLP-ALRSLFQ 89
Query: 102 AFKYRGRGHEVSDLGHLIGLYSEWHSHLLPYYSFDHFVSKVEQVAASRRVKMCIRDLRDR 161
+RG+GHE DL L+ W L P + F+ F+ KVE++ + V+ C++ +R
Sbjct: 90 DVHFRGKGHEAEDLRLLMQKLENWAHRLYPRFQFEDFMDKVERLGGKKEVQTCLKRIR-- 147
Query: 162 VANGGDPTKLHEAAVEHDGPVD 183
D HE E DG D
Sbjct: 148 ----LDMPLTHEDFTEKDGEED 165
>gi|296452932|sp|Q9BVW5.2|TIPIN_HUMAN RecName: Full=TIMELESS-interacting protein
gi|170560897|gb|ACB21044.1| TIMELESS interacting protein [Homo sapiens]
Length = 301
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 72/147 (48%), Gaps = 10/147 (6%)
Query: 54 GDGGVSVSKSAIG--VKEKPKK-LPRSRPKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGH 110
G+G +S G V+ PK+ + R+ PKL L+S+ GL LRH K++G+GH
Sbjct: 37 GEGTEPDEESGNGAPVRVPPKRTVKRNIPKLDAQRLISERGLP-ALRHVFDKAKFKGKGH 95
Query: 111 EVSDLGHLIGLYSEWHSHLLPYYSFDHFVSKVEQVAASRRVKMCIRDLRDRVANGGDPTK 170
E DL LI W L P F+ F+ +VE + + + V+ C++ +R D
Sbjct: 96 EAEDLKMLIRHMEHWAHRLFPKLQFEDFIDRVEYLGSKKEVQTCLKRIR------LDLPI 149
Query: 171 LHEAAVEHDGPVDEQAPAEAMSSERQP 197
LHE V ++ V E + S+E P
Sbjct: 150 LHEDFVSNNDEVAENNEHDVTSTELDP 176
>gi|109081570|ref|XP_001110143.1| PREDICTED: TIMELESS-interacting protein-like isoform 1 [Macaca
mulatta]
gi|297296712|ref|XP_002804880.1| PREDICTED: TIMELESS-interacting protein-like isoform 2 [Macaca
mulatta]
gi|297296715|ref|XP_002804881.1| PREDICTED: TIMELESS-interacting protein-like isoform 3 [Macaca
mulatta]
Length = 307
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 73/155 (47%), Gaps = 8/155 (5%)
Query: 43 ASGGGGGGSGVGDGGVSVSKSAIGVKEKPKKLPRSRPKLTPDLLLSDDGLGFVLRHFPRA 102
AS G G+ S S + + V K + + R+ PKL L+S+ GL LRH
Sbjct: 30 ASPERQDGEGIEPDEESGSGALVPVPPK-RTVKRNIPKLDAQRLISERGLP-ALRHVFDK 87
Query: 103 FKYRGRGHEVSDLGHLIGLYSEWHSHLLPYYSFDHFVSKVEQVAASRRVKMCIRDLRDRV 162
K++G+GHE DL LI W L P F+ F+ +VE + + + V+ C++ +R
Sbjct: 88 AKFKGKGHEAEDLKMLIRHMEHWAHRLFPKLQFEDFIDRVEYLGSKKEVQTCLKRIR--- 144
Query: 163 ANGGDPTKLHEAAVEHDGPVDEQAPAEAMSSERQP 197
D LHE V ++ V E + ++E P
Sbjct: 145 ---LDLPILHEDFVSNNDEVAENNEHDVTATELDP 176
>gi|383419501|gb|AFH32964.1| TIMELESS-interacting protein [Macaca mulatta]
Length = 307
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 73/155 (47%), Gaps = 8/155 (5%)
Query: 43 ASGGGGGGSGVGDGGVSVSKSAIGVKEKPKKLPRSRPKLTPDLLLSDDGLGFVLRHFPRA 102
AS G G+ S S + + V K + + R+ PKL L+S+ GL LRH
Sbjct: 30 ASPERQDGEGIEPDEESGSGALVPVPPK-RTVKRNIPKLDAQRLISERGLP-ALRHVFDK 87
Query: 103 FKYRGRGHEVSDLGHLIGLYSEWHSHLLPYYSFDHFVSKVEQVAASRRVKMCIRDLRDRV 162
K++G+GHE DL LI W L P F+ F+ +VE + + + V+ C++ +R
Sbjct: 88 AKFKGKGHEAEDLKMLIRHMEHWAHRLFPKLQFEDFIDRVEYLGSKKEVQTCLKRIR--- 144
Query: 163 ANGGDPTKLHEAAVEHDGPVDEQAPAEAMSSERQP 197
D LHE V ++ V E + ++E P
Sbjct: 145 ---LDLPILHEDFVSNNDEVAENNEHDVTATELDP 176
>gi|7020676|dbj|BAA91229.1| unnamed protein product [Homo sapiens]
Length = 301
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 64/128 (50%), Gaps = 8/128 (6%)
Query: 71 PKK-LPRSRPKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHL 129
PK+ + R+ PKL L+S+ GL LRH K++G+GHE DL LI W L
Sbjct: 56 PKRTVKRNIPKLDAQRLISERGLP-ALRHVFDKAKFKGKGHEAEDLKMLIRHMEHWAHRL 114
Query: 130 LPYYSFDHFVSKVEQVAASRRVKMCIRDLRDRVANGGDPTKLHEAAVEHDGPVDEQAPAE 189
P F+ F+ +VE + + + V+ C++ +R D LHE V ++ V E +
Sbjct: 115 FPKLQFEDFIDRVEYLGSKKEVQTCLKRIR------LDLPILHEDFVSNNDEVAENNEHD 168
Query: 190 AMSSERQP 197
S+E P
Sbjct: 169 VTSTELDP 176
>gi|397515618|ref|XP_003828046.1| PREDICTED: TIMELESS-interacting protein isoform 1 [Pan paniscus]
gi|397515620|ref|XP_003828047.1| PREDICTED: TIMELESS-interacting protein isoform 2 [Pan paniscus]
Length = 301
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 64/128 (50%), Gaps = 8/128 (6%)
Query: 71 PKK-LPRSRPKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHL 129
PK+ + R+ PKL L+S+ GL LRH K++G+GHE DL LI W L
Sbjct: 56 PKRTVKRNIPKLDAQRLISERGLP-ALRHVFDKAKFKGKGHEAEDLKMLIRHMEHWAHRL 114
Query: 130 LPYYSFDHFVSKVEQVAASRRVKMCIRDLRDRVANGGDPTKLHEAAVEHDGPVDEQAPAE 189
P F+ F+ +VE + + + V+ C++ +R D LHE V ++ V E +
Sbjct: 115 FPKLQFEDFIDRVEYLGSKKEVQTCLKRIR------LDLPILHEDFVSNNDEVAENNEHD 168
Query: 190 AMSSERQP 197
S+E P
Sbjct: 169 VTSTELDP 176
>gi|157388910|ref|NP_060328.2| TIMELESS-interacting protein [Homo sapiens]
gi|12654113|gb|AAH00870.1| TIMELESS interacting protein [Homo sapiens]
gi|32879807|tpg|DAA01365.1| TPA_exp: timeless-interacting protein [Homo sapiens]
gi|117645640|emb|CAL38286.1| hypothetical protein [synthetic construct]
gi|119598168|gb|EAW77762.1| timeless-interacting protein, isoform CRA_a [Homo sapiens]
gi|261859900|dbj|BAI46472.1| TIMELESS interacting protein [synthetic construct]
Length = 301
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 64/128 (50%), Gaps = 8/128 (6%)
Query: 71 PKK-LPRSRPKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHL 129
PK+ + R+ PKL L+S+ GL LRH K++G+GHE DL LI W L
Sbjct: 56 PKRTVKRNIPKLDAQRLISERGLP-ALRHVFDKAKFKGKGHEAEDLKMLIRHMEHWAHRL 114
Query: 130 LPYYSFDHFVSKVEQVAASRRVKMCIRDLRDRVANGGDPTKLHEAAVEHDGPVDEQAPAE 189
P F+ F+ +VE + + + V+ C++ +R D LHE V ++ V E +
Sbjct: 115 FPKLQFEDFIDRVEYLGSKKEVQTCLKRIR------LDLPILHEDFVSNNDEVAENNEHD 168
Query: 190 AMSSERQP 197
S+E P
Sbjct: 169 VTSTELDP 176
>gi|60593008|ref|NP_001012708.1| TIMELESS-interacting protein [Gallus gallus]
gi|82075375|sp|Q5F416.1|TIPIN_CHICK RecName: Full=TIMELESS-interacting protein
gi|60098575|emb|CAH65118.1| hypothetical protein RCJMB04_3n6 [Gallus gallus]
Length = 283
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Query: 72 KKLPRSRPKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHLLP 131
K + RS PKL + L+S+ GL LRH K++G+GHE DL L+ W L P
Sbjct: 65 KAVKRSIPKLDANRLVSERGLP-ALRHMFDNVKFKGKGHEAEDLKTLLRHMEHWAHRLFP 123
Query: 132 YYSFDHFVSKVEQVAASRRVKMCIRDLR 159
FD F+ +VE + + V+ C++ +R
Sbjct: 124 KLQFDDFIDRVESLGNKKEVQTCLKRIR 151
>gi|410294890|gb|JAA26045.1| TIMELESS interacting protein [Pan troglodytes]
gi|410330113|gb|JAA34003.1| TIMELESS interacting protein [Pan troglodytes]
Length = 301
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 64/128 (50%), Gaps = 8/128 (6%)
Query: 71 PKK-LPRSRPKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHL 129
PK+ + R+ PKL L+S+ GL LRH K++G+GHE DL LI W L
Sbjct: 56 PKRTVKRNIPKLDAQRLISERGLP-ALRHVFDKAKFKGKGHEAEDLKMLIRHMEHWAHRL 114
Query: 130 LPYYSFDHFVSKVEQVAASRRVKMCIRDLRDRVANGGDPTKLHEAAVEHDGPVDEQAPAE 189
P F+ F+ +VE + + + V+ C++ +R D LHE V ++ V E +
Sbjct: 115 FPKLQFEDFIDRVEYLGSKKEVQTCLKRIR------LDLPILHEDFVSNNDEVAENNEHD 168
Query: 190 AMSSERQP 197
S+E P
Sbjct: 169 VTSTELDP 176
>gi|449510098|ref|XP_002199204.2| PREDICTED: TIMELESS-interacting protein-like [Taeniopygia guttata]
Length = 477
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 56/119 (47%), Gaps = 4/119 (3%)
Query: 41 NTASGGGGGGSGVGDGGVSVSKSAIGVKEKPKKLPRSRPKLTPDLLLSDDGLGFVLRHFP 100
+ A G G+ SA+ + K + R RP+L L+S+ G+ LRH
Sbjct: 241 DDAEWAQANGDPDGNQQSQTKDSAVTTQ---KAVKRPRPRLDAQRLISERGIP-ALRHMF 296
Query: 101 RAFKYRGRGHEVSDLGHLIGLYSEWHSHLLPYYSFDHFVSKVEQVAASRRVKMCIRDLR 159
K++G+GHE DL LI W L P F+ F+ +VE + + V+ C++ +R
Sbjct: 297 DNVKFKGKGHEAEDLKTLIQHMEHWAHRLFPQLRFEDFIDRVESLGNKKEVQTCLKRIR 355
>gi|355778119|gb|EHH63155.1| hypothetical protein EGM_16067 [Macaca fascicularis]
Length = 307
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 73/155 (47%), Gaps = 8/155 (5%)
Query: 43 ASGGGGGGSGVGDGGVSVSKSAIGVKEKPKKLPRSRPKLTPDLLLSDDGLGFVLRHFPRA 102
AS G G+ S S + + V K + + R+ PKL L+S+ GL LRH
Sbjct: 30 ASPERQDGEGIEPDEESGSGALVPVPPK-RTVKRNIPKLDAQRLISERGLP-ALRHVFDK 87
Query: 103 FKYRGRGHEVSDLGHLIGLYSEWHSHLLPYYSFDHFVSKVEQVAASRRVKMCIRDLRDRV 162
K++G+GHE DL LI W L P F+ F+ +VE + + + V+ C++ +R
Sbjct: 88 AKFKGKGHEAEDLKMLIRHMEHWAHRLFPKLQFEDFIDRVEYLGSKKEVQTCLKRIR--- 144
Query: 163 ANGGDPTKLHEAAVEHDGPVDEQAPAEAMSSERQP 197
D LHE V ++ V E + ++E P
Sbjct: 145 ---LDLPILHEDFVSNNDEVAENNEHDVTATELDP 176
>gi|402874639|ref|XP_003901140.1| PREDICTED: TIMELESS-interacting protein [Papio anubis]
Length = 314
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 73/155 (47%), Gaps = 8/155 (5%)
Query: 43 ASGGGGGGSGVGDGGVSVSKSAIGVKEKPKKLPRSRPKLTPDLLLSDDGLGFVLRHFPRA 102
AS G G+ S S + + V K + + R+ PKL L+S+ GL LRH
Sbjct: 37 ASPERQDGEGIEPDEESGSGALVPVPPK-RTVKRNIPKLDAQRLISERGLP-ALRHVFDK 94
Query: 103 FKYRGRGHEVSDLGHLIGLYSEWHSHLLPYYSFDHFVSKVEQVAASRRVKMCIRDLRDRV 162
K++G+GHE DL LI W L P F+ F+ +VE + + + V+ C++ +R
Sbjct: 95 AKFKGKGHEAEDLKMLIRHMEHWAHRLFPKLQFEDFIDRVEYLGSKKEVQTCLKRIR--- 151
Query: 163 ANGGDPTKLHEAAVEHDGPVDEQAPAEAMSSERQP 197
D LHE V ++ V E + ++E P
Sbjct: 152 ---LDLPILHEDFVSNNDEVAENNEHDVTATELDP 183
>gi|426232578|ref|XP_004023391.1| PREDICTED: LOW QUALITY PROTEIN: TIMELESS-interacting protein [Ovis
aries]
Length = 307
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 65/128 (50%), Gaps = 8/128 (6%)
Query: 71 PKK-LPRSRPKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHL 129
PK+ + R+ PKL + L+S+ GL LRH K++G+GHE DL LI W L
Sbjct: 56 PKRTVKRNIPKLNAERLISERGLP-ALRHVFEKAKFKGKGHEAEDLKTLIRHMEHWAHRL 114
Query: 130 LPYYSFDHFVSKVEQVAASRRVKMCIRDLRDRVANGGDPTKLHEAAVEHDGPVDEQAPAE 189
P F+ F+ +VE + + V+ C++ +R D +HE V ++ V+E +
Sbjct: 115 FPKLQFEDFIDRVEYLGNKKEVQTCLKRIR------LDLPIVHEDFVSNNDEVEENNGHD 168
Query: 190 AMSSERQP 197
++E P
Sbjct: 169 VTATELDP 176
>gi|326926903|ref|XP_003209636.1| PREDICTED: TIMELESS-interacting protein-like [Meleagris gallopavo]
Length = 280
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Query: 72 KKLPRSRPKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHLLP 131
K + RS PKL L+S+ GL LRH K++G+GHE DL L+ W L P
Sbjct: 62 KAVKRSVPKLDAHRLVSERGLP-ALRHMFDNVKFKGKGHEAEDLKTLLRHMEHWAHRLFP 120
Query: 132 YYSFDHFVSKVEQVAASRRVKMCIRDLR 159
FD F+ +VE + + V+ C++ +R
Sbjct: 121 KLQFDDFIDRVESLGNKKEVQTCLKRIR 148
>gi|332235948|ref|XP_003267167.1| PREDICTED: TIMELESS-interacting protein isoform 1 [Nomascus
leucogenys]
gi|441616139|ref|XP_004088340.1| PREDICTED: TIMELESS-interacting protein isoform 2 [Nomascus
leucogenys]
Length = 306
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 64/128 (50%), Gaps = 8/128 (6%)
Query: 71 PKK-LPRSRPKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHL 129
PK+ + R+ PKL L+S+ GL LRH K++G+GHE DL LI W L
Sbjct: 56 PKRTVKRNIPKLDAQRLISERGLP-ALRHVFDKAKFKGKGHEAEDLKMLIRHMEHWAHRL 114
Query: 130 LPYYSFDHFVSKVEQVAASRRVKMCIRDLRDRVANGGDPTKLHEAAVEHDGPVDEQAPAE 189
P F+ F+ +VE + + + V+ C++ +R D LHE V ++ V E +
Sbjct: 115 FPKLQFEDFIDRVEYLGSKKEVQTCLKRIR------LDLPILHEDFVSNNDEVAENNEHD 168
Query: 190 AMSSERQP 197
++E P
Sbjct: 169 VTATELDP 176
>gi|417398444|gb|JAA46255.1| Putative meiotic chromosome segregation protein [Desmodus rotundus]
Length = 290
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 68/140 (48%), Gaps = 8/140 (5%)
Query: 71 PKK-LPRSRPKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHL 129
PK+ + R+ PKL L S+ GL LRH K++G+GHE DL LI W L
Sbjct: 56 PKRTVKRNIPKLDAQRLTSERGLP-ALRHVFEKAKFKGKGHEAEDLKTLIRHMEHWAHRL 114
Query: 130 LPYYSFDHFVSKVEQVAASRRVKMCIRDLRDRVANGGDPTKLHEAAVEHDGPVDEQAPAE 189
P F+ F+ +VE + + V+ C++ +R D LHE + ++ V E +
Sbjct: 115 FPKLQFEDFIDRVEYLGNKKEVQTCLKRIR------LDLPILHEDFISNNDEVGENNGHD 168
Query: 190 AMSSERQPHQQDPASNVHAA 209
++E P + + NV+ A
Sbjct: 169 VTATELDPFLTNSSENVNFA 188
>gi|157427800|ref|NP_001098806.1| TIMELESS-interacting protein [Bos taurus]
gi|122140911|sp|Q3ZCC4.1|TIPIN_BOVIN RecName: Full=TIMELESS-interacting protein
gi|73586608|gb|AAI02520.1| TIPIN protein [Bos taurus]
gi|296483603|tpg|DAA25718.1| TPA: TIMELESS-interacting protein [Bos taurus]
Length = 290
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 60/115 (52%), Gaps = 8/115 (6%)
Query: 71 PKK-LPRSRPKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHL 129
PK+ + R+ PKL + L+S+ GL LRH K++G+GHE DL LI W L
Sbjct: 56 PKRTVKRNIPKLNAERLISERGLP-ALRHVFEKAKFKGKGHEAEDLKTLIRHMEHWAHRL 114
Query: 130 LPYYSFDHFVSKVEQVAASRRVKMCIRDLRDRVANGGDPTKLHEAAVEHDGPVDE 184
P F+ F+ +VE + + V+ C++ +R D LHE V ++ V+E
Sbjct: 115 FPKLQFEDFIDRVECLGNKKEVQTCLKRIR------LDLPILHEDFVSNNDEVEE 163
>gi|432092217|gb|ELK24841.1| TIMELESS-interacting protein [Myotis davidii]
Length = 289
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 66/135 (48%), Gaps = 7/135 (5%)
Query: 72 KKLPRSRPKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHLLP 131
+ + R+ PKL L+S+ GL LRH K++G+GHE DL LI W L P
Sbjct: 57 RTVKRNIPKLDAQRLISERGLP-ALRHVFDKTKFKGKGHEAEDLKTLIRHMEHWAHRLFP 115
Query: 132 YYSFDHFVSKVEQVAASRRVKMCIRDLRDRVANGGDPTKLHEAAVEHDGPVDEQAPAEAM 191
F+ F+ +VE + + V+ C++ +R D LHE + ++ V E + +
Sbjct: 116 KLQFEDFIDRVEYLGNKKEVQTCLKRIR------LDLPILHEDFISNNDEVVENSDHDVT 169
Query: 192 SSERQPHQQDPASNV 206
++E P + + NV
Sbjct: 170 ATELDPFLTNSSENV 184
>gi|345795103|ref|XP_003433975.1| PREDICTED: TIMELESS-interacting protein [Canis lupus familiaris]
Length = 286
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 72/155 (46%), Gaps = 8/155 (5%)
Query: 43 ASGGGGGGSGVGDGGVSVSKSAIGVKEKPKKLPRSRPKLTPDLLLSDDGLGFVLRHFPRA 102
AS G G G S + + V K + + R+ PKL L+S+ GL LRH
Sbjct: 30 ASPQRGDGEGAEPDEESGRGAPVPVPPK-RTVKRNIPKLDAQRLISERGLP-ALRHVFDN 87
Query: 103 FKYRGRGHEVSDLGHLIGLYSEWHSHLLPYYSFDHFVSKVEQVAASRRVKMCIRDLRDRV 162
K++G+GHE DL LI W L P F+ F+ +VE + + + V+ C++ +R
Sbjct: 88 AKFKGKGHEAEDLKTLIRHMEHWAHRLFPKLQFEDFIDRVEYLGSKKEVQTCLKRIR--- 144
Query: 163 ANGGDPTKLHEAAVEHDGPVDEQAPAEAMSSERQP 197
D +HE + +DG E + ++E P
Sbjct: 145 ---LDLPIIHEDFISNDGEAGENHGYDKTATELDP 176
>gi|440908051|gb|ELR58118.1| TIMELESS-interacting protein [Bos grunniens mutus]
Length = 290
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 60/115 (52%), Gaps = 8/115 (6%)
Query: 71 PKK-LPRSRPKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHL 129
PK+ + R+ PKL + L+S+ GL LRH K++G+GHE DL LI W L
Sbjct: 56 PKRTVKRNIPKLNAERLISERGLP-ALRHVFEKAKFKGKGHEAEDLKTLIRHMEHWAHRL 114
Query: 130 LPYYSFDHFVSKVEQVAASRRVKMCIRDLRDRVANGGDPTKLHEAAVEHDGPVDE 184
P F+ F+ +VE + + V+ C++ +R D LHE V ++ V+E
Sbjct: 115 FPKLQFEDFIDRVECLGNKKEVQTCLKRIR------LDLPILHEDFVSNNDEVEE 163
>gi|449270660|gb|EMC81319.1| TIMELESS-interacting protein, partial [Columba livia]
Length = 259
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 54/114 (47%), Gaps = 4/114 (3%)
Query: 46 GGGGGSGVGDGGVSVSKSAIGVKEKPKKLPRSRPKLTPDLLLSDDGLGFVLRHFPRAFKY 105
G G+ SA+ + + + R PKL L+S+ GL + R F K+
Sbjct: 42 AQANGEPDGNQQSQTKDSAVATR---RVVKRPMPKLDAQRLISERGLPALRRMFDNV-KF 97
Query: 106 RGRGHEVSDLGHLIGLYSEWHSHLLPYYSFDHFVSKVEQVAASRRVKMCIRDLR 159
+G+GHE DL LI W L P F+ FV +VE + + + V+ C++ +R
Sbjct: 98 KGKGHEAEDLKTLIRHMEHWAHRLFPKLQFEDFVDRVESLGSKKEVQTCLKRIR 151
>gi|345569674|gb|EGX52539.1| hypothetical protein AOL_s00043g33 [Arthrobotrys oligospora ATCC
24927]
Length = 321
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 51/95 (53%), Gaps = 1/95 (1%)
Query: 56 GGVSVSKSAIGVKEKPKKLPRS-RPKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSD 114
G + + +GV E+ K R + KLT D LL DG+ ++ H + K++G+GHE++D
Sbjct: 41 GKGAAANEDLGVDEEIKIRTRKPKVKLTEDRLLGPDGIPYLREHAAQKIKFKGKGHEIAD 100
Query: 115 LGHLIGLYSEWHSHLLPYYSFDHFVSKVEQVAASR 149
L L+ Y W L P F + +E++ +SR
Sbjct: 101 LERLLKFYQIWADKLYPKAQFKDAIDMIEKMGSSR 135
>gi|307184079|gb|EFN70614.1| Protein TIPIN-like protein [Camponotus floridanus]
Length = 325
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 77/176 (43%), Gaps = 8/176 (4%)
Query: 35 SNFPSNNTASGGGGGGSGVGDGGVSVSKSAIGVKEKPKKLPRSRPKLTPDLLLSDDGLGF 94
N S++ G G D + K K + PKL + L +G+
Sbjct: 18 ENKESDDERGSLGMAGEATSDNEADTGRRIDPSKSKTHTVRNPMPKLNTERLKGPNGIHT 77
Query: 95 VLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHLLPYYSFDHFVSKVEQVAASRRVKMC 154
+ ++F FK+ G+GHE +DL ++ W L P Y FD F+++VEQ+ + +++
Sbjct: 78 IEKYF-EGFKFYGKGHEKTDLDRIMKRLEHWSYRLFPKYHFDDFLTRVEQLGTKKDLQVF 136
Query: 155 IRDLRDRVANGGDPTKLHEAA-VEHDGPVDEQAPAE----AMSSERQPHQQDPASN 205
++ R + D +H+ E D P E AP + ++ + Q +Q A N
Sbjct: 137 MKKYRLDMLTSDDDLIIHDNMDNEEDQP--ENAPLDDFDLLITEQIQKQKQAEARN 190
>gi|51010993|ref|NP_001003452.1| TIMELESS-interacting protein [Danio rerio]
gi|82182082|sp|Q6DBR4.1|TIPIN_DANRE RecName: Full=TIMELESS-interacting protein
gi|50418110|gb|AAH78398.1| Timeless interacting protein [Danio rerio]
gi|182888628|gb|AAI63996.1| Tipin protein [Danio rerio]
Length = 294
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 68/144 (47%), Gaps = 9/144 (6%)
Query: 50 GSGVGDGGVSVSKSAIGVKEKPKKLPRSRPKLTPDLLLSDDGLGFVLRHFPRAFKYRGRG 109
G+ G+ VSK A K + + R RPKL + L+S+ GL LR K++G+G
Sbjct: 43 GNAEGEEEGEVSKLAEVPVAKRRTVKRPRPKLDANRLISEKGLP-ALRTLFEDVKFKGKG 101
Query: 110 HEVSDLGHLIGLYSEWHSHLLPYYSFDHFVSKVEQVAASRRVKMCIRDLRDRVANGGDPT 169
HE +L L+ W L P F+ F+ KVE + + V+ C++ +R D
Sbjct: 102 HETENLKLLMLKMENWAHRLYPKMQFEEFIDKVENLGGKKEVQTCLKRIR------LDMP 155
Query: 170 KLHEAAVEHDGPVDEQAPAEAMSS 193
HE V + + Q P E++ S
Sbjct: 156 ITHEDYVAEEAEI--QVPEESVPS 177
>gi|345323878|ref|XP_001511348.2| PREDICTED: TIMELESS-interacting protein-like [Ornithorhynchus
anatinus]
Length = 420
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Query: 72 KKLPRSRPKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHLLP 131
K + R+ PKL L+S+ GL LRH K++GRGHE DL LI W L P
Sbjct: 194 KTVKRNLPKLDAHRLVSERGLP-ALRHMFDNVKFKGRGHEAEDLKTLIRHMEHWAHRLFP 252
Query: 132 YYSFDHFVSKVEQVAASRRVKMCIRDLR 159
F+ F+ ++E + + V+ C++ +R
Sbjct: 253 KLRFEDFIDRIEHLGNKKEVQTCLKRIR 280
>gi|148694115|gb|EDL26062.1| timeless interacting protein, isoform CRA_c [Mus musculus]
Length = 294
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 51/98 (52%), Gaps = 2/98 (2%)
Query: 63 SAIGVKEKPKK-LPRSRPKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGL 121
S GV PK+ + R+ PKL L S+ GL LRH K++G+GHE DL LI
Sbjct: 61 SGSGVPVPPKRTVKRNLPKLDATRLTSERGLP-ALRHVFDKTKFKGKGHEAEDLKTLIRH 119
Query: 122 YSEWHSHLLPYYSFDHFVSKVEQVAASRRVKMCIRDLR 159
W L P F+ F+ +VE + + V+ C++ +R
Sbjct: 120 MEHWAHRLFPKLQFEDFIDRVENLGNKKEVQTCLKRIR 157
>gi|355724284|gb|AES08179.1| TIMELESS-interacting protein-like protein [Mustela putorius furo]
Length = 285
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 50/90 (55%), Gaps = 2/90 (2%)
Query: 71 PKK-LPRSRPKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHL 129
PK+ + R+ PKL L+S+ GL LRH K++G+GHE DL LI W L
Sbjct: 56 PKRTVKRNIPKLDAQRLISERGLP-ALRHVFDKVKFKGKGHEAEDLKTLIRHMEHWAHRL 114
Query: 130 LPYYSFDHFVSKVEQVAASRRVKMCIRDLR 159
P F+ F+ +VE + + + V+ C++ +R
Sbjct: 115 FPKLQFEDFIDRVEYLGSKKEVQTCLKRIR 144
>gi|21313608|ref|NP_079648.1| TIMELESS-interacting protein [Mus musculus]
gi|158706356|sp|Q91WA1.2|TIPIN_MOUSE RecName: Full=TIMELESS-interacting protein
gi|12834688|dbj|BAB23004.1| unnamed protein product [Mus musculus]
gi|12847427|dbj|BAB27565.1| unnamed protein product [Mus musculus]
gi|26332427|dbj|BAC29931.1| unnamed protein product [Mus musculus]
gi|32879805|tpg|DAA01364.1| TPA_exp: timeless-interacting protein [Mus musculus]
gi|148694113|gb|EDL26060.1| timeless interacting protein, isoform CRA_a [Mus musculus]
Length = 278
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 51/98 (52%), Gaps = 2/98 (2%)
Query: 63 SAIGVKEKPKK-LPRSRPKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGL 121
S GV PK+ + R+ PKL L S+ GL LRH K++G+GHE DL LI
Sbjct: 45 SGSGVPVPPKRTVKRNLPKLDATRLTSERGLP-ALRHVFDKTKFKGKGHEAEDLKTLIRH 103
Query: 122 YSEWHSHLLPYYSFDHFVSKVEQVAASRRVKMCIRDLR 159
W L P F+ F+ +VE + + V+ C++ +R
Sbjct: 104 MEHWAHRLFPKLQFEDFIDRVENLGNKKEVQTCLKRIR 141
>gi|148694116|gb|EDL26063.1| timeless interacting protein, isoform CRA_d [Mus musculus]
Length = 280
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 51/98 (52%), Gaps = 2/98 (2%)
Query: 63 SAIGVKEKPKK-LPRSRPKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGL 121
S GV PK+ + R+ PKL L S+ GL LRH K++G+GHE DL LI
Sbjct: 47 SGSGVPVPPKRTVKRNLPKLDATRLTSERGLP-ALRHVFDKTKFKGKGHEAEDLKTLIRH 105
Query: 122 YSEWHSHLLPYYSFDHFVSKVEQVAASRRVKMCIRDLR 159
W L P F+ F+ +VE + + V+ C++ +R
Sbjct: 106 MEHWAHRLFPKLQFEDFIDRVENLGNKKEVQTCLKRIR 143
>gi|16740667|gb|AAH16211.1| Timeless interacting protein [Mus musculus]
Length = 278
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 51/98 (52%), Gaps = 2/98 (2%)
Query: 63 SAIGVKEKPKK-LPRSRPKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGL 121
S GV PK+ + R+ PKL L S+ GL LRH K++G+GHE DL LI
Sbjct: 45 SGSGVPVPPKRTVKRNLPKLDATRLTSERGLP-ALRHVFDKTKFKGKGHEAEDLKTLIRH 103
Query: 122 YSEWHSHLLPYYSFDHFVSKVEQVAASRRVKMCIRDLR 159
W L P F+ F+ +VE + + V+ C++ +R
Sbjct: 104 MEHWAHRLFPKLQFEDFIDRVENLGNKKEVQTCLKRIR 141
>gi|395502706|ref|XP_003755718.1| PREDICTED: TIMELESS-interacting protein [Sarcophilus harrisii]
Length = 412
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Query: 72 KKLPRSRPKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHLLP 131
K + R+ PKL L+S+ GL LRH K++G+G+E DL LI W L P
Sbjct: 185 KAVKRNLPKLDAQRLISERGLP-ALRHAFDNVKFKGKGYEAEDLKTLIRHMEHWAHRLFP 243
Query: 132 YYSFDHFVSKVEQVAASRRVKMCIRDLR 159
F+ F+S++E + + V+ C++ +R
Sbjct: 244 KLQFEDFISRIEHLGNKKEVQTCLKRIR 271
>gi|338717836|ref|XP_001918132.2| PREDICTED: TIMELESS-interacting protein-like [Equus caballus]
Length = 291
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 63/128 (49%), Gaps = 8/128 (6%)
Query: 71 PKK-LPRSRPKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHL 129
PK+ + R+ PKL LLS+ GL LRH K++G+GHE DL LI W L
Sbjct: 56 PKRTVKRNIPKLDAQRLLSERGLP-ALRHVFDKAKFKGKGHEAEDLKTLIRHMEHWAHRL 114
Query: 130 LPYYSFDHFVSKVEQVAASRRVKMCIRDLRDRVANGGDPTKLHEAAVEHDGPVDEQAPAE 189
P F+ F+ +VE + + V+ C++ +R D LHE + ++ V E +
Sbjct: 115 FPKLQFEDFIDRVEYLGNKKEVQTCLKRIR------LDLPILHEDFISNNDEVRENNGHD 168
Query: 190 AMSSERQP 197
++E P
Sbjct: 169 VTATELDP 176
>gi|431895893|gb|ELK05311.1| TIMELESS-interacting protein [Pteropus alecto]
Length = 290
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 62/128 (48%), Gaps = 8/128 (6%)
Query: 71 PKK-LPRSRPKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHL 129
PK+ + R+ PKL L+S+ GL LRH K++G+GHE DL LI W L
Sbjct: 57 PKRTVKRNMPKLDAQRLISERGLP-ALRHVFDTAKFKGKGHEAEDLKTLIRHMEHWAHRL 115
Query: 130 LPYYSFDHFVSKVEQVAASRRVKMCIRDLRDRVANGGDPTKLHEAAVEHDGPVDEQAPAE 189
P F+ F+ +VE + + V+ C++ +R D LHE + ++ V E +
Sbjct: 116 FPKLQFEDFIDRVEYLGNKKEVQTCLKRIR------LDLPILHEDFISNNDEVGENNSHD 169
Query: 190 AMSSERQP 197
+ E P
Sbjct: 170 VTAVELDP 177
>gi|328909039|gb|AEB61187.1| TIMELESS-interacting-like protein [Equus caballus]
Length = 273
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 63/128 (49%), Gaps = 8/128 (6%)
Query: 71 PKK-LPRSRPKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHL 129
PK+ + R+ PKL LLS+ GL LRH K++G+GHE DL LI W L
Sbjct: 56 PKRTVKRNIPKLDAQRLLSERGLP-ALRHVFDKAKFKGKGHEAEDLKTLIRHMEHWAHRL 114
Query: 130 LPYYSFDHFVSKVEQVAASRRVKMCIRDLRDRVANGGDPTKLHEAAVEHDGPVDEQAPAE 189
P F+ F+ +VE + + V+ C++ +R D LHE + ++ V E +
Sbjct: 115 FPKLQFEDFIDRVEYLGNKKEVQTCLKRIR------LDLPILHEDFISNNDEVRENNGHD 168
Query: 190 AMSSERQP 197
++E P
Sbjct: 169 VTATELDP 176
>gi|12834131|dbj|BAB22798.1| unnamed protein product [Mus musculus]
Length = 278
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 51/98 (52%), Gaps = 2/98 (2%)
Query: 63 SAIGVKEKPKK-LPRSRPKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGL 121
S GV PK+ + R+ PKL L S+ GL LRH K++G+GHE DL LI
Sbjct: 45 SGSGVPVPPKRTVKRNLPKLDAARLTSERGLP-ALRHVFDKTKFKGKGHEAEDLKTLIRH 103
Query: 122 YSEWHSHLLPYYSFDHFVSKVEQVAASRRVKMCIRDLR 159
W L P F+ F+ +VE + + V+ C++ +R
Sbjct: 104 MEHWAHRLFPKLQFEDFIDRVENLGNKKEVQTCLKRIR 141
>gi|351695547|gb|EHA98465.1| TIMELESS-interacting protein [Heterocephalus glaber]
Length = 283
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 68/148 (45%), Gaps = 8/148 (5%)
Query: 50 GSGVGDGGVSVSKSAIGVKEKPKKLPRSRPKLTPDLLLSDDGLGFVLRHFPRAFKYRGRG 109
G G S S+ + V K + + R+ P+L L+S+ GL LRH K++G+G
Sbjct: 36 GEGAEPDEESGSREPVPVPPK-RTVKRNIPRLDAQRLISERGLP-ALRHVFDKIKFKGKG 93
Query: 110 HEVSDLGHLIGLYSEWHSHLLPYYSFDHFVSKVEQVAASRRVKMCIRDLRDRVANGGDPT 169
HE DL LI W L P F+ F+ +VE + + V+ C++ +R D
Sbjct: 94 HEAEDLKTLIRHMEHWAHRLFPKLQFEDFIDRVEYLGNKKEVQTCLKRIR------LDLP 147
Query: 170 KLHEAAVEHDGPVDEQAPAEAMSSERQP 197
LHE V + V E E ++E P
Sbjct: 148 ILHEDFVSNSDDVGENNGLEVTATEFDP 175
>gi|301756945|ref|XP_002914306.1| PREDICTED: TIMELESS-interacting protein-like [Ailuropoda
melanoleuca]
Length = 289
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 50/90 (55%), Gaps = 2/90 (2%)
Query: 71 PKK-LPRSRPKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHL 129
PK+ + R+ PKL L+S+ GL LRH K++G+GHE DL LI W L
Sbjct: 56 PKRTVKRNIPKLDAQRLISERGLP-ALRHVFDKAKFKGKGHEAEDLKTLIRHMEHWAHRL 114
Query: 130 LPYYSFDHFVSKVEQVAASRRVKMCIRDLR 159
P F+ F+ +VE + + + V+ C++ +R
Sbjct: 115 FPKLQFEDFIDRVEYLGSKKEVQTCLKRIR 144
>gi|348555469|ref|XP_003463546.1| PREDICTED: TIMELESS-interacting protein-like [Cavia porcellus]
Length = 249
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 55/110 (50%), Gaps = 2/110 (1%)
Query: 50 GSGVGDGGVSVSKSAIGVKEKPKKLPRSRPKLTPDLLLSDDGLGFVLRHFPRAFKYRGRG 109
G G S SK + V K + + R+ P+L L+S+ GL LRH K++G+G
Sbjct: 36 GEGAELNEESESKEPVPVPPK-RTVKRNIPRLDAQRLISEKGLP-ALRHVFDKTKFKGKG 93
Query: 110 HEVSDLGHLIGLYSEWHSHLLPYYSFDHFVSKVEQVAASRRVKMCIRDLR 159
HE DL LI W L P F+ F+ +VE + + V+ C++ +R
Sbjct: 94 HEAEDLKTLIRHMEHWAHRLFPKLQFEDFIDRVEYLGNKKEVQTCLKRIR 143
>gi|449296718|gb|EMC92737.1| hypothetical protein BAUCODRAFT_125714 [Baudoinia compniacensis
UAMH 10762]
Length = 317
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 50/88 (56%), Gaps = 2/88 (2%)
Query: 67 VKEKPKKLPRSRPKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWH 126
+K + K+ P PKL +LLLS +GL + R K+RG+GHE SD+G L+ Y W
Sbjct: 49 IKVRKKRAPN--PKLDDNLLLSSNGLPRLRRIAKSKLKFRGKGHECSDIGRLLNTYQLWL 106
Query: 127 SHLLPYYSFDHFVSKVEQVAASRRVKMC 154
L P F ++ VE++ S+R+++
Sbjct: 107 DDLYPKAKFKDALAMVEKLGHSKRMQVT 134
>gi|281347339|gb|EFB22923.1| hypothetical protein PANDA_002193 [Ailuropoda melanoleuca]
Length = 278
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 50/90 (55%), Gaps = 2/90 (2%)
Query: 71 PKK-LPRSRPKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHL 129
PK+ + R+ PKL L+S+ GL LRH K++G+GHE DL LI W L
Sbjct: 56 PKRTVKRNIPKLDAQRLISERGLP-ALRHVFDKAKFKGKGHEAEDLKTLIRHMEHWAHRL 114
Query: 130 LPYYSFDHFVSKVEQVAASRRVKMCIRDLR 159
P F+ F+ +VE + + + V+ C++ +R
Sbjct: 115 FPKLQFEDFIDRVEYLGSKKEVQTCLKRIR 144
>gi|293361862|ref|XP_002730112.1| PREDICTED: TIMELESS-interacting protein-like [Rattus norvegicus]
gi|392343003|ref|XP_003754769.1| PREDICTED: TIMELESS-interacting protein-like [Rattus norvegicus]
Length = 276
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 48/90 (53%), Gaps = 2/90 (2%)
Query: 71 PKKL-PRSRPKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHL 129
PK++ R+ PKL L S+ GL LRH K++G+GHE DL LI W L
Sbjct: 53 PKRIVKRNIPKLDATRLTSERGLP-ALRHVFDKTKFKGKGHEAEDLKTLIRHMEHWAHRL 111
Query: 130 LPYYSFDHFVSKVEQVAASRRVKMCIRDLR 159
P F+ F+ +VE + + V+ C++ +R
Sbjct: 112 FPKLQFEDFIDRVENLGNKKEVQTCLKRIR 141
>gi|70608124|ref|NP_001020458.1| TIMELESS-interacting protein [Rattus norvegicus]
gi|81918203|sp|Q4QR88.1|TIPIN_RAT RecName: Full=TIMELESS-interacting protein
gi|67677934|gb|AAH97351.1| Timeless interacting protein [Rattus norvegicus]
gi|149041951|gb|EDL95792.1| rCG57866, isoform CRA_a [Rattus norvegicus]
Length = 276
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 48/90 (53%), Gaps = 2/90 (2%)
Query: 71 PKKL-PRSRPKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHL 129
PK++ R+ PKL L S+ GL LRH K++G+GHE DL LI W L
Sbjct: 53 PKRIVKRNIPKLDATRLTSERGLP-ALRHVFDKTKFKGKGHEAEDLKTLIRHMEHWAHRL 111
Query: 130 LPYYSFDHFVSKVEQVAASRRVKMCIRDLR 159
P F+ F+ +VE + + V+ C++ +R
Sbjct: 112 FPKLQFEDFIDRVENLGNKKEVQTCLKRIR 141
>gi|335280111|ref|XP_001925266.2| PREDICTED: LOW QUALITY PROTEIN: TIMELESS-interacting protein [Sus
scrofa]
Length = 305
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 49/90 (54%), Gaps = 2/90 (2%)
Query: 71 PKK-LPRSRPKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHL 129
PK+ + R+ PKL L+S+ GL LRH K++G+GHE DL LI W L
Sbjct: 55 PKRTVKRNIPKLDAQRLISERGLP-ALRHVFDKAKFKGKGHEAEDLKMLIRHMEHWAHRL 113
Query: 130 LPYYSFDHFVSKVEQVAASRRVKMCIRDLR 159
P F+ F+ +VE + + V+ C++ +R
Sbjct: 114 FPKLQFEDFIDRVEYLGNKKEVQTCLKRIR 143
>gi|195035517|ref|XP_001989224.1| GH11605 [Drosophila grimshawi]
gi|193905224|gb|EDW04091.1| GH11605 [Drosophila grimshawi]
Length = 296
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 54/102 (52%), Gaps = 1/102 (0%)
Query: 54 GDGGVSVSKSAIGVKEKPKKLPRSRPKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVS 113
DG V A+ V+ K + + RP+LT D L GL + H+ + KY+G+GHE +
Sbjct: 48 ADGAVEEGVEAVKVEPKKRAVRNPRPRLTVDTLRGPRGL-HTMEHYFKDIKYKGKGHEKA 106
Query: 114 DLGHLIGLYSEWHSHLLPYYSFDHFVSKVEQVAASRRVKMCI 155
DL ++ W + P Y+FD ++ +E++ + +++ +
Sbjct: 107 DLDEILRRLQHWGHRMYPNYTFDDVLNNIERLGKKKPLQVHM 148
>gi|354493396|ref|XP_003508828.1| PREDICTED: TIMELESS-interacting protein-like [Cricetulus griseus]
Length = 288
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 48/90 (53%), Gaps = 2/90 (2%)
Query: 71 PKK-LPRSRPKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHL 129
PK+ + R+ PKL L S+ GL LRH K++G+GHE DL LI W L
Sbjct: 55 PKRTVKRNLPKLDATRLTSERGLP-ALRHVFDKTKFKGKGHEAEDLKTLIRHMEHWAHRL 113
Query: 130 LPYYSFDHFVSKVEQVAASRRVKMCIRDLR 159
P F+ F+ +VE + + V+ C++ +R
Sbjct: 114 FPKLQFEDFIDRVENLGNKKEVQTCLKRIR 143
>gi|344235583|gb|EGV91686.1| TIMELESS-interacting protein [Cricetulus griseus]
Length = 243
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 62/124 (50%), Gaps = 8/124 (6%)
Query: 71 PKK-LPRSRPKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHL 129
PK+ + R+ PKL L S+ GL LRH K++G+GHE DL LI W L
Sbjct: 55 PKRTVKRNLPKLDATRLTSERGLP-ALRHVFDKTKFKGKGHEAEDLKTLIRHMEHWAHRL 113
Query: 130 LPYYSFDHFVSKVEQVAASRRVKMCIRDLRDRVANGGDPTKLHEAAVEHDGPVDEQAPAE 189
P F+ F+ +VE + + V+ C++ +R D +HE V ++ V+E +
Sbjct: 114 FPKLQFEDFIDRVENLGNKKEVQTCLKRIR------LDLPIIHEDFVSNNDEVEETNTLD 167
Query: 190 AMSS 193
A ++
Sbjct: 168 ATAA 171
>gi|291402813|ref|XP_002718228.1| PREDICTED: TIMELESS interacting protein [Oryctolagus cuniculus]
Length = 291
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 49/90 (54%), Gaps = 2/90 (2%)
Query: 71 PKK-LPRSRPKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHL 129
PK+ + R+ PKL L+S+ GL LRH K++G+GHE DL LI W L
Sbjct: 53 PKRTVKRNIPKLDAQRLISERGLP-ALRHVFDKTKFKGKGHEAEDLRTLIRHMEHWAHRL 111
Query: 130 LPYYSFDHFVSKVEQVAASRRVKMCIRDLR 159
P F+ F+ +VE + + V+ C++ +R
Sbjct: 112 FPRLQFEDFIDRVEYLGNKKEVQTCLKRIR 141
>gi|383861859|ref|XP_003706402.1| PREDICTED: protein TIPIN homolog [Megachile rotundata]
Length = 306
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 71/149 (47%), Gaps = 10/149 (6%)
Query: 79 PKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHLLPYYSFDHF 138
PKL + L G+ + ++F FK+ G+G+E DL ++ W L P FD F
Sbjct: 66 PKLNTERLKGPKGIHTIEKYFE-GFKFHGKGYEKLDLDRVMKRMEHWGHRLFPKLDFDDF 124
Query: 139 VSKVEQVAASRRVKMCIRDLRDRVANGGDPTKLH-----EAAVEHDGPVDE--QAPAEAM 191
+ KVE++ + + +++ I+ R + + D E E D P+DE AE +
Sbjct: 125 LEKVEKLGSKKDLQVFIKKYRQDMISADDNLTTQDDMDAEEDKEQDEPIDEFDMLIAEQI 184
Query: 192 SSERQPHQQDPASN--VHAADDFNDLFNK 218
++Q QQ S+ ++ D FN L ++
Sbjct: 185 EKQKQVMQQSTLSDTSINNEDTFNALLSQ 213
>gi|392578202|gb|EIW71330.1| hypothetical protein TREMEDRAFT_60260 [Tremella mesenterica DSM
1558]
Length = 629
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 59/111 (53%), Gaps = 1/111 (0%)
Query: 50 GSGVGDGGVSVSKSAIGVKEKPKKLPRSRPKLTPDLLLSDDGLGFVLRHFPRAFKYRGRG 109
G+ VG G + + + K R PK+ + LL D G+ ++R + FK RG+G
Sbjct: 64 GAYVGGVGTTEKRGGDDDLDGGGKKRRIIPKIDAERLLGDKGIPGLMR-VAKKFKPRGKG 122
Query: 110 HEVSDLGHLIGLYSEWHSHLLPYYSFDHFVSKVEQVAASRRVKMCIRDLRD 160
E++DL L+G+Y W + P F +S+VE+V SRR++ ++ R+
Sbjct: 123 QEMADLRDLLGIYQMWAHGMFPKGDFAGTISRVEKVCHSRRMESAMKGFRE 173
>gi|114657768|ref|XP_510492.2| PREDICTED: uncharacterized protein LOC453525 isoform 2 [Pan
troglodytes]
Length = 302
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 65/128 (50%), Gaps = 7/128 (5%)
Query: 71 PKK-LPRSRPKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHL 129
PK+ + R+ PKL L+S+ GL LRH K++G+GHE DL LI W L
Sbjct: 56 PKRTVKRNIPKLDAQRLISERGLP-ALRHVFDKAKFKGKGHEAEDLKMLIRHMEHWAHRL 114
Query: 130 LPYYSFDHFVSKVEQVAASRRVKMCIRDLRDRVANGGDPTKLHEAAVEHDGPVDEQAPAE 189
P F+ F+ +VE + + + V++ +L R+ DP LHE V ++ V E +
Sbjct: 115 FPKLQFEDFIDRVEYLGSKKEVQV---NLLKRIR--LDPPILHEDFVSNNDEVAENNEHD 169
Query: 190 AMSSERQP 197
S+E P
Sbjct: 170 VTSTELDP 177
>gi|410961102|ref|XP_003987124.1| PREDICTED: TIMELESS-interacting protein [Felis catus]
Length = 289
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 66/128 (51%), Gaps = 8/128 (6%)
Query: 71 PKK-LPRSRPKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHL 129
PK+ + R+ P+L L+S+ GL + R F +A K++G+G+E DL LI W L
Sbjct: 55 PKRTVKRNIPRLDAQRLISERGLPALRRVFDKA-KFKGKGYEAEDLKTLIRHMEHWAHRL 113
Query: 130 LPYYSFDHFVSKVEQVAASRRVKMCIRDLRDRVANGGDPTKLHEAAVEHDGPVDEQAPAE 189
P F+ F+ +VE + + + V+ C++ +R D LHE + ++ V E +
Sbjct: 114 FPKLQFEDFIDRVEYLGSKKEVQTCLKRIR------LDLPILHEDFINNNDEVRENNVHD 167
Query: 190 AMSSERQP 197
++E P
Sbjct: 168 VTATESDP 175
>gi|169610285|ref|XP_001798561.1| hypothetical protein SNOG_08239 [Phaeosphaeria nodorum SN15]
gi|121925236|sp|Q0UJ25.1|CSM3_PHANO RecName: Full=Chromosome segregation in meiosis protein 3
gi|111063395|gb|EAT84515.1| hypothetical protein SNOG_08239 [Phaeosphaeria nodorum SN15]
Length = 244
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 70/153 (45%), Gaps = 16/153 (10%)
Query: 43 ASGGGGGGSGVG-DGGVSVSKSAIGVKEKPKKLPRSRPKLTPDLLLSDDGLGFVLRHFPR 101
+ G G G G+G D + ++K I + PKL + LLSD G+ + R
Sbjct: 41 SKGSGNAGDGLGIDEEIIITKKRIPI-----------PKLDDNRLLSDPGIPRLRRISKD 89
Query: 102 AFKYRGRGHEVSDLGHLIGLYSEWHSHLLPYYSFDHFVSKVEQVAASRRVKMCIRDLRDR 161
+++G+GHE D+ ++ +Y W L P F ++ +E+V ++R++M +R
Sbjct: 90 RLRFKGKGHEYGDIARMLNMYQLWLDDLYPRAKFADALTIIEKVGHTKRMQM----MRKE 145
Query: 162 VANGGDPTKLHEAAVEHDGPVDEQAPAEAMSSE 194
+ G P + E V QAP ++E
Sbjct: 146 WIDEGKPRRTSAYEEEDADEVVVQAPTTEQATE 178
>gi|395822813|ref|XP_003784703.1| PREDICTED: TIMELESS-interacting protein [Otolemur garnettii]
Length = 293
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 58/117 (49%), Gaps = 2/117 (1%)
Query: 43 ASGGGGGGSGVGDGGVSVSKSAIGVKEKPKKLPRSRPKLTPDLLLSDDGLGFVLRHFPRA 102
AS G G G S S + + V K + + R+ PKL L S+ GL + F +A
Sbjct: 30 ASPGRGNGEEAEPDEESGSGAPVPVPPK-RTVKRNIPKLDAQRLTSERGLPALRNLFDKA 88
Query: 103 FKYRGRGHEVSDLGHLIGLYSEWHSHLLPYYSFDHFVSKVEQVAASRRVKMCIRDLR 159
K++G+GHE DL LI W L P F+ F+ +VE + + V+ C++ +R
Sbjct: 89 -KFKGKGHEAEDLKMLIRHMEHWAHRLFPKLQFEDFIERVEYLGNKKEVQTCLKRIR 144
>gi|426200111|gb|EKV50035.1| hypothetical protein AGABI2DRAFT_115101 [Agaricus bisporus var.
bisporus H97]
Length = 329
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 53/101 (52%), Gaps = 1/101 (0%)
Query: 55 DGGVSVSKSAIGVKEKPKKLPRSRPKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSD 114
DGG + + + I KEK PR L +LLL G ++ + FK +G+GHEV D
Sbjct: 9 DGGATGTTNGIQGKEKEPNKPRKLVTLNENLLLGPTGFPDLISEL-KDFKVKGKGHEVED 67
Query: 115 LGHLIGLYSEWHSHLLPYYSFDHFVSKVEQVAASRRVKMCI 155
L L+ +Y+ W L P F V +VE++ S+R++ +
Sbjct: 68 LTRLMRVYNFWAHRLHPKLKFRDTVLRVEKLCHSKRMQASV 108
>gi|409082280|gb|EKM82638.1| hypothetical protein AGABI1DRAFT_125103 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 438
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 60/126 (47%), Gaps = 11/126 (8%)
Query: 30 SAPSNSNFPSNNTASGGGGGGSGVGDGGVSVSKSAIGVKEKPKKLPRSRPKLTPDLLLSD 89
S P + PS++ A GG G+ G G KEK PR L +LLL
Sbjct: 114 SLPPLTAMPSSSPARDGGATGTTNGIQG----------KEKEPNKPRKLVTLNENLLLGP 163
Query: 90 DGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHLLPYYSFDHFVSKVEQVAASR 149
G ++ + FK +G+GHEV DL L+ +Y+ W L P F V +VE++ S+
Sbjct: 164 TGFPDLISEL-KDFKVKGKGHEVEDLTRLMRVYNFWAHRLHPKLKFRDTVLRVEKLCHSK 222
Query: 150 RVKMCI 155
R++ +
Sbjct: 223 RMQASV 228
>gi|115388881|ref|XP_001211946.1| predicted protein [Aspergillus terreus NIH2624]
gi|114196030|gb|EAU37730.1| predicted protein [Aspergillus terreus NIH2624]
Length = 360
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 83/193 (43%), Gaps = 28/193 (14%)
Query: 29 SSAPSNSNFPSNNTASGGGGGGSGVGDGGVSVSKSAIGVKEKPKKLPRSRPKLTPDLLLS 88
SS SN N P + + G G G D V V++ K+ P + KL LLS
Sbjct: 92 SSTRSNINAPQTSESRGLGLGL----DDEVKVTR---------KRQPIA--KLDEGRLLS 136
Query: 89 DDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHLLPYYSFDHFVSKVEQVAAS 148
G+ + R + K++G+GHE SD L+ Y W L P F ++ +E++ S
Sbjct: 137 QAGIPKLRRSAKQKLKFKGKGHEFSDAARLLNFYQLWLDDLFPRAKFTDGLAMIEKLGHS 196
Query: 149 RRVKMCIRDLRDRV---ANGGDPTKLHEAAVEHDGPVDEQA--PAEAMSSERQPHQQDPA 203
+R++ R+ D+ D L EA H A P++ S+ RQ
Sbjct: 197 KRIQTMRREWIDQEKPRQRDDDDEPLQEAEGSHHNETSNAADQPSDRQSNSRQ------- 249
Query: 204 SNVHAADDFNDLF 216
+ H DD NDLF
Sbjct: 250 -SPHPNDDSNDLF 261
>gi|298706341|emb|CBJ29350.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 525
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 46/89 (51%)
Query: 72 KKLPRSRPKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHLLP 131
KK+ P + + L+ + GL + + FP+ +Y+GRG E L L+ Y EW L P
Sbjct: 56 KKVSNRPPAFSENHLVKEKGLWQIYKDFPQKCQYKGRGREAEFLRGLMVAYKEWGYQLYP 115
Query: 132 YYSFDHFVSKVEQVAASRRVKMCIRDLRD 160
+F+ + E++ R + +R+LRD
Sbjct: 116 GVAFEDLACRTEKLGGRARTRSLLRELRD 144
>gi|68012432|ref|NP_001018832.1| replication fork protection complex subunit Swi3
[Schizosaccharomyces pombe 972h-]
gi|59800385|sp|O14350.2|SWI3_SCHPO RecName: Full=Swi1-interacting protein swi3; AltName:
Full=Replication fork protection complex subunit swi3
gi|45775298|gb|AAS77252.1| Swi3 [Schizosaccharomyces pombe]
gi|48478821|gb|AAT44735.1| Swi3 [Schizosaccharomyces pombe]
gi|51477134|emb|CAH17997.1| replication fork protection complex subunit Swi3
[Schizosaccharomyces pombe]
Length = 181
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 58/108 (53%), Gaps = 6/108 (5%)
Query: 65 IGVKEKPK--KLPRSR-PKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGL 121
+G++E P K PR R K + L+S++G+ LR R K +G+GHE DL L+G+
Sbjct: 33 LGLEENPDSVKKPRKRLAKFDEERLISENGIP-KLRKMMRKVKLKGKGHEAKDLKQLLGM 91
Query: 122 YSEWHSHLLPYYSFDHFVSKVEQVAASRRVKMCIRDLRDRVA--NGGD 167
Y W L P +FD +S ++ + R VK+ R + +A NG D
Sbjct: 92 YHIWTHELYPRATFDDSISYLKTLGKHRSVKVRRRGWINEIAVENGSD 139
>gi|340709100|ref|XP_003393152.1| PREDICTED: hypothetical protein LOC100648777 [Bombus terrestris]
Length = 410
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 86/195 (44%), Gaps = 19/195 (9%)
Query: 39 SNNTASGGGGGGSGVGDGGVSVSKSAIGVKE-----KPKKLPRS-RPKLTPDLLLSDDGL 92
N + G G D SK V+ K + R+ PKL + L G+
Sbjct: 135 ENQESDGDQGNVQKNSDSENDQSKEENAVRRIDPSSSKKHIVRNPLPKLNTERLKGPKGI 194
Query: 93 GFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHLLPYYSFDHFVSKVEQVAASRRVK 152
+ ++F FK+ G+G+E DL ++ W L P FD F+ ++E++ + ++
Sbjct: 195 HTIEKYFE-GFKFHGQGYEKLDLDRVMKRLEHWGHRLFPKLDFDDFLERLEKLGTKKDLQ 253
Query: 153 MCIRDLRDRVAN------GGDPTKLHEAAVEHDGPVDE--QAPAEAMSSERQPHQQDPAS 204
+ IR R + N D + E V+ D P+DE AE + ++Q QQ A
Sbjct: 254 VFIRKYRQDMINEDNDIINEDNIDVEENIVQ-DEPIDEFDLLIAEQIEKQKQVMQQ-TAI 311
Query: 205 NVHAADDFNDLFNKV 219
NV + ND+F+K+
Sbjct: 312 NVPTTN--NDVFDKL 324
>gi|393216862|gb|EJD02352.1| Swi3-domain-containing protein, partial [Fomitiporia mediterranea
MF3/22]
Length = 278
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 58/116 (50%), Gaps = 7/116 (6%)
Query: 48 GGGSGVGDGGV-SVSKSAIGVKEKPKKLPRSRPKLTPDLLLSDDGLGFVLRHFPRAFKYR 106
G G+G DG S + G +K R PKL D LL +GL L + FK +
Sbjct: 136 GFGAGDKDGAFGSRTADEAGATKK-----RQVPKLNEDRLLDKNGLP-ALVQVCKDFKPK 189
Query: 107 GRGHEVSDLGHLIGLYSEWHSHLLPYYSFDHFVSKVEQVAASRRVKMCIRDLRDRV 162
G+GHE++DL L LY W + P F V++VE++ S+R+ + RD++
Sbjct: 190 GKGHELADLNRLFSLYQFWAHKMYPKTQFSDTVNRVEKLCHSKRMHSALLGWRDQI 245
>gi|355692813|gb|EHH27416.1| hypothetical protein EGK_17609 [Macaca mulatta]
Length = 307
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 72/155 (46%), Gaps = 8/155 (5%)
Query: 43 ASGGGGGGSGVGDGGVSVSKSAIGVKEKPKKLPRSRPKLTPDLLLSDDGLGFVLRHFPRA 102
AS G G+ S S + + V K + + R+ PKL L+S+ GL LRH
Sbjct: 30 ASPERQDGEGIEPDEESGSGALVPVPPK-RTVKRNIPKLDAQRLISERGLP-ALRHVFDK 87
Query: 103 FKYRGRGHEVSDLGHLIGLYSEWHSHLLPYYSFDHFVSKVEQVAASRRVKMCIRDLRDRV 162
K++G+GHE DL LI L P F+ F+ +VE + + + V+ C++ +R
Sbjct: 88 AKFKGKGHEAEDLKMLIRHMEHCAHRLFPKLQFEDFIDRVEYLGSKKEVQTCLKRIR--- 144
Query: 163 ANGGDPTKLHEAAVEHDGPVDEQAPAEAMSSERQP 197
D LHE V ++ V E + ++E P
Sbjct: 145 ---LDLPILHEDFVSNNDEVAENNEHDVTATELDP 176
>gi|332023212|gb|EGI63468.1| Protein TIPIN-like protein [Acromyrmex echinatior]
Length = 324
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 71/155 (45%), Gaps = 10/155 (6%)
Query: 41 NTASGGGGGGSGVGDGGVSVSKSAIGVKEKPKKLPRSR--------PKLTPDLLLSDDGL 92
N S G G + S +++ + P K +S+ PKL + L +G+
Sbjct: 19 NQESDDERGSHGEAEDATSDNETGTARRIDPSK-SKSKSHVVRNPVPKLNTERLTGPNGI 77
Query: 93 GFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHLLPYYSFDHFVSKVEQVAASRRVK 152
+ ++F FK+ G+GHE +DL ++ W L P Y FD F++++EQ+ + ++
Sbjct: 78 QTIEKYF-EGFKFYGKGHEKTDLDRIMKRLEHWSYRLFPKYHFDDFLTRLEQLGTKKDLQ 136
Query: 153 MCIRDLRDRVANGGDPTKLHEAAVEHDGPVDEQAP 187
+ I+ R + D ++ + + +E AP
Sbjct: 137 VFIKKYRLDMITSDDNLITNDMDKDDENEQEESAP 171
>gi|295671877|ref|XP_002796485.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226283465|gb|EEH39031.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 326
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 77/157 (49%), Gaps = 19/157 (12%)
Query: 63 SAIGVKEKPKKLPRSRP--KLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIG 120
+ +G+ E+ K P+ RP KL LLS G+ + + K++G+GHE SD L+
Sbjct: 60 AGLGLDEEIKVAPKRRPVVKLDETRLLSQAGIPKLRKDAKTKLKFKGKGHEFSDAMRLLN 119
Query: 121 LYSEWHSHLLPYYSFDHFVSKVEQVAASRRVKMCIRDLRDRVANGGDPTKLHEAAVEHDG 180
Y W +L P F ++ +E++ S+R+++ +R N G P K H A E D
Sbjct: 120 FYQLWLDNLYPRAKFADGLAIIEKLGHSKRIQI----MRKEWINEGKP-KSH--ANERD- 171
Query: 181 PVDEQAPAEAMSSERQPHQQDPASNVHAADDFNDLFN 217
+DE+ +A RQP PA+N ++ D N
Sbjct: 172 -IDEEIGNQA----RQP----PAANDVTMTNYEDARN 199
>gi|396459817|ref|XP_003834521.1| hypothetical protein LEMA_P061900.1 [Leptosphaeria maculans JN3]
gi|312211070|emb|CBX91156.1| hypothetical protein LEMA_P061900.1 [Leptosphaeria maculans JN3]
Length = 271
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 64/133 (48%), Gaps = 13/133 (9%)
Query: 79 PKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHLLPYYSFDHF 138
PKL + LLSD G+ + R +++G+G+E D+ ++ +Y W L P F
Sbjct: 71 PKLNDERLLSDAGIPRLRRISKERLRFKGKGNEYGDIARMLNMYQLWLDDLYPRAKFADA 130
Query: 139 VSKVEQVAASRRVKMCIRDLRDRVANGGDPTKLHEAAVEHDGPVDEQAPAEAMSSERQPH 198
++ VE+V +RR+++ +D D G P + E EHD VD+ P A H
Sbjct: 131 LAMVEKVGHTRRMQIMRKDWIDE----GKPRRATEQE-EHDD-VDQLPPTAA-------H 177
Query: 199 QQDPASNVHAADD 211
++ A V DD
Sbjct: 178 PEESADTVQGVDD 190
>gi|158564107|sp|Q0CU66.2|CSM3_ASPTN RecName: Full=Chromosome segregation in meiosis protein 3
Length = 302
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 83/194 (42%), Gaps = 28/194 (14%)
Query: 28 SSSAPSNSNFPSNNTASGGGGGGSGVGDGGVSVSKSAIGVKEKPKKLPRSRPKLTPDLLL 87
SS SN N P + + G G G D V V++ K+ P + KL LL
Sbjct: 33 ESSTRSNINAPQTSESRGLGLGL----DDEVKVTR---------KRQPIA--KLDEGRLL 77
Query: 88 SDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHLLPYYSFDHFVSKVEQVAA 147
S G+ + R + K++G+GHE SD L+ Y W L P F ++ +E++
Sbjct: 78 SQAGIPKLRRSAKQKLKFKGKGHEFSDAARLLNFYQLWLDDLFPRAKFTDGLAMIEKLGH 137
Query: 148 SRRVKMCIRDLRDRV---ANGGDPTKLHEAAVEHDGPVDEQA--PAEAMSSERQPHQQDP 202
S+R++ R+ D+ D L EA H A P++ S+ RQ
Sbjct: 138 SKRIQTMRREWIDQEKPRQRDDDDEPLQEAEGSHHNETSNAADQPSDRQSNSRQ------ 191
Query: 203 ASNVHAADDFNDLF 216
+ H DD NDLF
Sbjct: 192 --SPHPNDDSNDLF 203
>gi|194758781|ref|XP_001961637.1| GF15066 [Drosophila ananassae]
gi|190615334|gb|EDV30858.1| GF15066 [Drosophila ananassae]
Length = 307
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 75/155 (48%), Gaps = 6/155 (3%)
Query: 36 NFPSNNTASGGGGGGSGVGDGGVSVSKSAIGVKEKPKKLPRSRPKLTPDLLLSDDGLGFV 95
PS+N + G S+ AI V+ K + + RP+LT D L G+ +
Sbjct: 24 QLPSDNEGEKLFADDEDNKESGEPGSQDAITVEPKKRAVRNPRPRLTVDTLRGPRGIQTI 83
Query: 96 LRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHLLPYYSFDHFVSKVEQVAASRRVKMCI 155
+F + K++G+G+E SDL ++ W + P Y+FD ++ +E++ + +++ +
Sbjct: 84 EGYF-KDIKFKGKGYEKSDLDEVLRRLQHWGHRMYPTYTFDDVLNNIERLGKKKPLQVHM 142
Query: 156 RDLRDRVANGGD-PTKLHEAAVEHDGPVDEQAPAE 189
R R+ D PT H+A +G D+Q AE
Sbjct: 143 --TRYRLGQLEDFPT--HDANALEEGQDDQQDDAE 173
>gi|91087647|ref|XP_973370.1| PREDICTED: similar to Timeless-interacting protein (XTipin)
[Tribolium castaneum]
Length = 398
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 51/91 (56%), Gaps = 2/91 (2%)
Query: 70 KPKKLPRS-RPKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSH 128
K K++ R+ +PKL + L GL + HF R KY+G+G+E DLG ++ Y W
Sbjct: 118 KAKRVIRNPQPKLNAERLKGPRGLAALESHFDR-VKYKGKGYEEQDLGVILKTYEYWCHR 176
Query: 129 LLPYYSFDHFVSKVEQVAASRRVKMCIRDLR 159
L P Y FD ++K+E + + + V I+ +R
Sbjct: 177 LFPKYPFDECIAKIEALGSKKPVVTHIKRIR 207
>gi|388583956|gb|EIM24257.1| Swi3-domain-containing protein [Wallemia sebi CBS 633.66]
Length = 262
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 50/92 (54%), Gaps = 4/92 (4%)
Query: 69 EKPKKLPRSRPKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSH 128
EKPK R K+ P+ LL +GL +L + +K++G+GHE+ DL L+ Y W
Sbjct: 79 EKPK---RVLAKIDPERLLGQNGLPALLAS-SKNWKFKGKGHEIEDLKKLLSYYQLWAHK 134
Query: 129 LLPYYSFDHFVSKVEQVAASRRVKMCIRDLRD 160
+ P F + KVE++ RR++ ++ +D
Sbjct: 135 MFPKTQFSDTIEKVEKICHQRRMEAALKGWKD 166
>gi|270009422|gb|EFA05870.1| hypothetical protein TcasGA2_TC008670 [Tribolium castaneum]
Length = 396
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Query: 78 RPKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHLLPYYSFDH 137
+PKL + L GL + HF R KY+G+G+E DLG ++ Y W L P Y FD
Sbjct: 125 QPKLNAERLKGPRGLAALESHFDR-VKYKGKGYEEQDLGVILKTYEYWCHRLFPKYPFDE 183
Query: 138 FVSKVEQVAASRRVKMCIRDLR 159
++K+E + + + V I+ +R
Sbjct: 184 CIAKIEALGSKKPVVTHIKRIR 205
>gi|392558539|gb|EIW51726.1| Swi3-domain-containing protein [Trametes versicolor FP-101664 SS1]
Length = 474
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 2/91 (2%)
Query: 72 KKLPRSRPKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHLLP 131
KK+ R RP L L+S DG +++ + FK +G+GHEV DLG L+ +Y W +L
Sbjct: 153 KKIKRRRP-LDEARLVSPDGFPALIKQA-KEFKPKGKGHEVQDLGRLLNVYQFWAHNLYA 210
Query: 132 YYSFDHFVSKVEQVAASRRVKMCIRDLRDRV 162
F V KVE++ S+R+ + + RD
Sbjct: 211 NTHFTDTVQKVEKLCHSKRMNVALSVWRDEA 241
>gi|225555095|gb|EEH03388.1| chromosome segregation in meiosis protein 3 [Ajellomyces capsulatus
G186AR]
Length = 344
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 73/156 (46%), Gaps = 13/156 (8%)
Query: 51 SGVGDGGVSVSKSAIGVKEKPKKLPRSRP--KLTPDLLLSDDGLGFVLRHFPRAFKYRGR 108
SG + + +++G+ E+ K P+ RP KL LLS G+ LR + K+RG+
Sbjct: 49 SGSNNAPADSNNASLGLDEEIKVAPKRRPIPKLDEARLLSPAGIP-KLRRDAKKLKFRGK 107
Query: 109 GHEVSDLGHLIGLYSEWHSHLLPYYSFDHFVSKVEQVAASRRVKMCIRDLRDRVANGGDP 168
GHE SD L+ Y W L P F ++ +E++ S+RV++ +R N G
Sbjct: 108 GHEYSDAMRLLNFYQLWLDDLYPRAKFADGLAIIEKLGHSKRVQI----MRKEWINEG-- 161
Query: 169 TKLHEAAVEHDGPVDE---QAPAEAMSSERQPHQQD 201
KL AV+ D Q PA + R H Q+
Sbjct: 162 -KLRPDAVDRDEEASNDTTQLPAANDAVTRDEHGQN 196
>gi|158299620|ref|XP_001238183.2| AGAP008953-PA [Anopheles gambiae str. PEST]
gi|157013604|gb|EAU75916.2| AGAP008953-PA [Anopheles gambiae str. PEST]
Length = 289
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 58/115 (50%), Gaps = 6/115 (5%)
Query: 48 GGGSGVGDGGVSVSKS---AIGVKEKPKKLPRSRPKLTPDLLLSDDGLGFVLRHFPRAFK 104
G G GD + + A+ VK+K + PR+ L L G+ + HF + FK
Sbjct: 32 GDADGSGDEATDAAPAKPVAVEVKKKTVRNPRNM--LNEAKLCGPRGIIALKDHF-KHFK 88
Query: 105 YRGRGHEVSDLGHLIGLYSEWHSHLLPYYSFDHFVSKVEQVAASRRVKMCIRDLR 159
+ G+GHE SDL L+ Y W L P + FD ++K+E++ ++V+M + R
Sbjct: 89 FHGKGHEASDLNRLMRNYEHWAHRLYPKFHFDDCMAKIEKLGHKKQVQMYMNKYR 143
>gi|254583320|ref|XP_002497228.1| ZYRO0F00638p [Zygosaccharomyces rouxii]
gi|238940121|emb|CAR28295.1| ZYRO0F00638p [Zygosaccharomyces rouxii]
Length = 232
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 81/192 (42%), Gaps = 17/192 (8%)
Query: 38 PSNNTASGGGGGGSGVGDGGVSVSKSAIG---VKEKPKKLPRSRPKLTPDLLLSDDGLGF 94
P N +A G + G S + + E K R +PKLT D+LLS GL +
Sbjct: 11 PGNESADFNGNDNDRLDPIGPSNDDPTMADPTMAEALTKTRRVQPKLTSDILLSRRGLPY 70
Query: 95 VLRHFPRAFKY-RGRGHEVSDLGHLIGLYSEWHSHLLPYYSFDHFVS-----KVEQVAAS 148
++++ P+ + R +L ++ Y W L P F F+ K ++
Sbjct: 71 LVKNGPKRLRISTSRNKPYDNLSQIVQFYQLWAHELYPRAKFKDFIKLCQNMKNDKAVRE 130
Query: 149 RRVKMCIRDLRDRVANGGDPTKLHEAAVEHDGPVDEQAPAEAMSSERQPHQQD---PASN 205
R ++C+R++ N T LH E D E + E ++E++P Q D P++
Sbjct: 131 YRTELCLREM-----NPSRYTSLHGDHDEDDDIYQESSIREPPATEKEPKQHDESVPSAE 185
Query: 206 VHAADDFNDLFN 217
A + D+ +
Sbjct: 186 TGAQQEEQDVLD 197
>gi|189205048|ref|XP_001938859.1| replication fork protection component Swi3 [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187985958|gb|EDU51446.1| replication fork protection component Swi3 [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 265
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 62/132 (46%), Gaps = 12/132 (9%)
Query: 29 SSAPSNSNFPSNNTASGGGGGGSGVGDGGVSVSKSAIGVKEKPKKLPRSRPKLTPDLLLS 88
S + PS N+ GG GV D + ++K K +P PKL LLS
Sbjct: 32 QSTEEQTQPPSWNSNKNDTAGGLGV-DEEIVITK-----KRQPA------PKLDDQRLLS 79
Query: 89 DDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHLLPYYSFDHFVSKVEQVAAS 148
D G+ + + +++G+GHE D+ ++ +Y W L P F ++ +E+V +
Sbjct: 80 DPGIPRLRKISKERLRFKGKGHEYGDIARMLNMYQLWLDDLYPRAKFADALAIIEKVGHT 139
Query: 149 RRVKMCIRDLRD 160
+R++M +D D
Sbjct: 140 KRMQMMRKDWID 151
>gi|322801803|gb|EFZ22394.1| hypothetical protein SINV_15471 [Solenopsis invicta]
Length = 293
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/199 (20%), Positives = 85/199 (42%), Gaps = 12/199 (6%)
Query: 35 SNFPSNNTASGGGGGGSGVGDGGVSVSKSAIGVKEKPKKLPRSRPKLTPDLLLSDDGLGF 94
N SN+ + D ++ K K + PKL + L +G+
Sbjct: 37 ENRDSNDERGSYEEAENATSDNETDTTRRIDPSKSKSHVVRNPVPKLNTERLKGPNGIQT 96
Query: 95 VLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHLLPYYSFDHFVSKVEQVAASRRVKMC 154
+ ++F FK+ G+G+E +DL ++ W L P Y FD F+++VEQ+ + +++
Sbjct: 97 IEQYFE-GFKFYGKGYEKTDLDRIMKRLEHWSYRLFPKYHFDDFLTRVEQLGTKKDLQVF 155
Query: 155 IRDLRDRVANGGDPTKLHEAAVEHDGPVDEQAP---------AEAMSSERQPHQQDPASN 205
I+ R + + +H+ +++ +++ E + ++Q Q A
Sbjct: 156 IKKYRQDMITSDNNLIIHDDMDKYNDENQQESALLDDFDLLITEQIQKQKQAETQISAIT 215
Query: 206 VHAADDFNDLFNKVYRTAT 224
+++ D FNK+ +T
Sbjct: 216 PSTSNE--DAFNKLLTQST 232
>gi|409045880|gb|EKM55360.1| hypothetical protein PHACADRAFT_173471 [Phanerochaete carnosa
HHB-10118-sp]
Length = 465
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 59/130 (45%), Gaps = 17/130 (13%)
Query: 46 GGGGGSGVGDGGVSVSKSAIGVKEKPKKLPRSRPKLTPDLLLSDDGLGFVLRHFPRAFKY 105
G GG GDG K I KL +R LL DG ++ + FK
Sbjct: 131 GAGGKKKQGDGLEGNKKRKIA------KLDEAR-------LLGSDGFPALINQA-KGFKP 176
Query: 106 RGRGHEVSDLGHLIGLYSEWHSHLLPYYSFDHFVSKVEQVAASRRVKMCIRDLRDR---V 162
RG+GHEVSDL L+ +Y W + P +F V +VE++ S+R+ + RD +
Sbjct: 177 RGKGHEVSDLNRLLQMYQFWTHKMYPKATFHDSVQRVEKLCHSKRMHSALGVWRDEHHGL 236
Query: 163 ANGGDPTKLH 172
NG P L+
Sbjct: 237 INGCKPEDLN 246
>gi|301617977|ref|XP_002938396.1| PREDICTED: TIMELESS-interacting protein [Xenopus (Silurana)
tropicalis]
Length = 368
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Query: 76 RSRPKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHLLPYYSF 135
R +PKL L S GL LRH K++G+GHE D+ L+ W L P F
Sbjct: 70 RPQPKLDGQRLASKRGLP-ALRHLFEGVKFKGKGHEAEDVKLLLRQMENWAHRLFPKLQF 128
Query: 136 DHFVSKVEQVAASRRVKMCIRDLR 159
+ F++++E + + V+ C++ +R
Sbjct: 129 EDFLNRLESMGNKKEVQTCLKKIR 152
>gi|123905673|sp|Q0IHI4.1|TIPIN_XENLA RecName: Full=TIMELESS-interacting protein; AltName: Full=XTipin
gi|114107764|gb|AAI23143.1| Xtipin protein [Xenopus laevis]
Length = 360
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 58/123 (47%), Gaps = 7/123 (5%)
Query: 39 SNNTASGGGGGGSGVGDGGVSVSKSAIGVKEKPKK--LPRSRPKLTPDLLLSDDGLGFVL 96
+++ A G + G + + A KP + + R +PKL L S GL L
Sbjct: 34 ADDEAEDVANGDDWTENAGQTQREEA----PKPARRVVKRPQPKLDGQRLASQRGLP-AL 88
Query: 97 RHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHLLPYYSFDHFVSKVEQVAASRRVKMCIR 156
RH K++G+GHE DL L+ W L P F+ F++++E + + V+ C++
Sbjct: 89 RHMFDDVKFKGKGHETEDLKILLRQMENWAHRLFPKLQFEDFLNRLESMGNKKEVQTCLK 148
Query: 157 DLR 159
+R
Sbjct: 149 KIR 151
>gi|148225426|ref|NP_001081090.1| TIMELESS-interacting protein [Xenopus laevis]
gi|76573446|dbj|BAE45345.1| XTimeless interacting protein [Xenopus laevis]
Length = 362
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Query: 76 RSRPKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHLLPYYSF 135
R +PKL L S GL LRH K++G+GHE DL L+ W L P F
Sbjct: 69 RPQPKLDGQRLASQRGLP-ALRHMFDDVKFKGKGHETEDLKILLRQMENWAHRLFPKLQF 127
Query: 136 DHFVSKVEQVAASRRVKMCIRDLR 159
+ F++++E + + V+ C++ +R
Sbjct: 128 EDFLNRLESMGNKKEVQTCLKKIR 151
>gi|147903813|ref|NP_001085621.1| timeless interacting protein [Xenopus laevis]
gi|49115685|gb|AAH73036.1| MGC82649 protein [Xenopus laevis]
Length = 361
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 58/129 (44%), Gaps = 4/129 (3%)
Query: 34 NSNFPSNNTASGGGGGGSGVGDGGV-SVSKSAIGVKEKPKK--LPRSRPKLTPDLLLSDD 90
+ NFP G G GD + ++ KP + + R +PKL L S
Sbjct: 20 DENFPPLPPPHSPGAGDEADGDDWTENAGQTQRDEAPKPARRVVKRPQPKLDGQRLASKR 79
Query: 91 GLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHLLPYYSFDHFVSKVEQVAASRR 150
GL LR K++G+GHE DL L+ W L P F+ F++++E + +
Sbjct: 80 GLP-ALRQMFDGVKFKGKGHEAEDLKILLRQMENWAHRLFPKLQFEDFLNRLESMGNKKE 138
Query: 151 VKMCIRDLR 159
V+ C++ +R
Sbjct: 139 VQTCLKKIR 147
>gi|330918122|ref|XP_003298096.1| hypothetical protein PTT_08698 [Pyrenophora teres f. teres 0-1]
gi|311328881|gb|EFQ93790.1| hypothetical protein PTT_08698 [Pyrenophora teres f. teres 0-1]
Length = 269
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 63/127 (49%), Gaps = 18/127 (14%)
Query: 34 NSNFPSNNTASGGGGGGSGVGDGGVSVSKSAIGVKEKPKKLPRSRPKLTPDLLLSDDGLG 93
NSN N+TASGG G D + V+K K +P PKL LLSD G+
Sbjct: 44 NSN--RNDTASGGLGV-----DEEIVVTK-----KRQPA------PKLDDQRLLSDPGIP 85
Query: 94 FVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHLLPYYSFDHFVSKVEQVAASRRVKM 153
+ + +++G+GHE D+ ++ +Y W L P F ++ +E+V ++R++M
Sbjct: 86 RLRKISKERLRFKGKGHEYGDIARMLNMYQLWLDDLYPRAKFADALAIIEKVGHTKRMQM 145
Query: 154 CIRDLRD 160
+D D
Sbjct: 146 MRKDWID 152
>gi|327287784|ref|XP_003228608.1| PREDICTED: TIMELESS-interacting protein-like [Anolis carolinensis]
Length = 266
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Query: 76 RSRPKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHLLPYYSF 135
R PKL L+S+ GL LR K++G+GHE +DL LI W L P F
Sbjct: 63 RPLPKLDAQRLISERGLP-ALRSMFDNIKFKGKGHEEADLQALIRHMEHWAHRLFPKLQF 121
Query: 136 DHFVSKVEQVAASRRVKMCIRDLR 159
+ FV +VE + + V+ C++ +R
Sbjct: 122 EEFVDRVETLGNKKPVQACLKRIR 145
>gi|325092203|gb|EGC45513.1| chromosome segregation in meiosis protein 3 [Ajellomyces capsulatus
H88]
Length = 344
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 73/156 (46%), Gaps = 13/156 (8%)
Query: 51 SGVGDGGVSVSKSAIGVKEKPKKLPRSRP--KLTPDLLLSDDGLGFVLRHFPRAFKYRGR 108
SG + + +++G+ ++ K P+ RP KL LLS G+ LR + K+RG+
Sbjct: 49 SGSNNAPADSNSASLGLDQEIKVAPKRRPIPKLDEARLLSPAGIP-KLRRDAKKLKFRGK 107
Query: 109 GHEVSDLGHLIGLYSEWHSHLLPYYSFDHFVSKVEQVAASRRVKMCIRDLRDRVANGGDP 168
GHE SD L+ Y W L P F ++ +E++ S+RV++ +R N G
Sbjct: 108 GHEYSDAMRLLNFYQLWLDDLYPRAKFADGLAIIEKLGHSKRVQI----MRKEWINEG-- 161
Query: 169 TKLHEAAVEHDGPVDE---QAPAEAMSSERQPHQQD 201
KL AV+ D Q PA + R H Q+
Sbjct: 162 -KLRPDAVDRDEEASNDTTQLPAANDAVTRDEHGQN 196
>gi|406861291|gb|EKD14346.1| replication fork protection component Swi3 [Marssonina brunnea f.
sp. 'multigermtubi' MB_m1]
Length = 364
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 61/130 (46%), Gaps = 15/130 (11%)
Query: 47 GGGGSGVGDGGVSVSKSAIGVKEKPKKLPRSRPKLTPDLLLSDDGLGFVLRHFPRAFKYR 106
G G G+ D A+ V KP++ R KL D LLS +G+ + + +++
Sbjct: 65 AGDGLGIDD--------AVEVTRKPRE---PRIKLDEDRLLSANGIPKLRNRAKKHLRFK 113
Query: 107 GRGHEVSDLGHLIGLYSEWHSHLLPYYSFDHFVSKVEQVAASRRVKMCIRDLRDRVANGG 166
G+GHE D +L+ Y W L P F ++ VE+ +R++M +R N G
Sbjct: 114 GKGHEYKDAENLLTFYQIWLDDLFPKARFLDALAMVEKTGHKKRIQM----MRMEWINEG 169
Query: 167 DPTKLHEAAV 176
P +HE ++
Sbjct: 170 KPQAVHEDSL 179
>gi|20977030|gb|AAM33248.1| mitotic phosphoprotein 67 [Xenopus laevis]
Length = 553
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Query: 76 RSRPKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHLLPYYSF 135
R +PKL L S GL LRH K++G+GHE DL L+ W L P F
Sbjct: 245 RPQPKLDGQRLASQRGLP-ALRHMFDDVKFKGKGHETEDLKILLRQMENWAHRLFPKLQF 303
Query: 136 DHFVSKVEQVAASRRVKMCIRDLR 159
+ F++++E + + V+ C++ +R
Sbjct: 304 EDFLNRLESMGNKKEVQTCLKKIR 327
>gi|154273024|ref|XP_001537364.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150415876|gb|EDN11220.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 345
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 57/109 (52%), Gaps = 3/109 (2%)
Query: 51 SGVGDGGVSVSKSAIGVKEKPKKLPRSRP--KLTPDLLLSDDGLGFVLRHFPRAFKYRGR 108
SG + + +++G+ E+ K P+ RP KL LLS G+ LR + K+RG+
Sbjct: 49 SGSNNAPADSNSASLGLDEEIKVAPKRRPVPKLDEARLLSPAGIP-KLRRDAKKLKFRGK 107
Query: 109 GHEVSDLGHLIGLYSEWHSHLLPYYSFDHFVSKVEQVAASRRVKMCIRD 157
GHE SD L+ Y W L P F ++ +E++ S+RV++ ++
Sbjct: 108 GHEYSDAMRLLNFYQLWLDDLYPRAKFADGLAIIEKLGHSKRVQIMRKE 156
>gi|453083403|gb|EMF11449.1| Swi3-domain-containing protein [Mycosphaerella populorum SO2202]
Length = 304
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 50/90 (55%), Gaps = 2/90 (2%)
Query: 67 VKEKPKKLPRSRPKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWH 126
V+ K K++P PKL + LLS G+ + + K+RG+GHE +D+ +L+ Y W
Sbjct: 58 VQIKKKRVPI--PKLDENRLLSQAGIPKLRKITKSRLKFRGKGHEYTDISNLLNTYQLWL 115
Query: 127 SHLLPYYSFDHFVSKVEQVAASRRVKMCIR 156
L P F V+ VE+V S+R+++ R
Sbjct: 116 DDLYPRAKFRDAVTMVEKVGHSKRMQVTRR 145
>gi|240281300|gb|EER44803.1| Swi3 domain-containing protein [Ajellomyces capsulatus H143]
Length = 346
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 73/156 (46%), Gaps = 13/156 (8%)
Query: 51 SGVGDGGVSVSKSAIGVKEKPKKLPRSRP--KLTPDLLLSDDGLGFVLRHFPRAFKYRGR 108
SG + + +++G+ ++ K P+ RP KL LLS G+ LR + K+RG+
Sbjct: 49 SGSNNAPADSNSASLGLDQEIKVAPKRRPIPKLDEARLLSPAGIP-KLRRDAKKLKFRGK 107
Query: 109 GHEVSDLGHLIGLYSEWHSHLLPYYSFDHFVSKVEQVAASRRVKMCIRDLRDRVANGGDP 168
GHE SD L+ Y W L P F ++ +E++ S+RV++ +R N G
Sbjct: 108 GHEYSDAMRLLNFYQLWLDDLYPRAKFADGLAIIEKLGHSKRVQI----MRKEWINEG-- 161
Query: 169 TKLHEAAVEHDGPVDE---QAPAEAMSSERQPHQQD 201
KL AV+ D Q PA + R H Q+
Sbjct: 162 -KLRPDAVDRDEEASNDTTQLPAANDAVTRDEHGQN 196
>gi|405952403|gb|EKC20220.1| TIMELESS-interacting protein [Crassostrea gigas]
Length = 440
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
Query: 72 KKLPRSRPKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHLLP 131
K + R +PKL L + G+ + + F + K++G+GHE DL ++ W L P
Sbjct: 64 KVVRRPQPKLDATRLTGERGIPILPKVF-QDVKFKGKGHEARDLQIIMRYLEHWAHRLFP 122
Query: 132 YYSFDHFVSKVEQVAASRRVKMCIRDLR 159
FD + ++E++ VK CI+ +R
Sbjct: 123 KMPFDEVLERIEKLGTKNEVKTCIKRMR 150
>gi|116193963|ref|XP_001222794.1| hypothetical protein CHGG_06699 [Chaetomium globosum CBS 148.51]
gi|121784916|sp|Q2H3R6.1|CSM3_CHAGB RecName: Full=Chromosome segregation in meiosis protein 3
gi|88182612|gb|EAQ90080.1| hypothetical protein CHGG_06699 [Chaetomium globosum CBS 148.51]
Length = 431
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 70/155 (45%), Gaps = 15/155 (9%)
Query: 72 KKLPRS-RPKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHLL 130
KK PR+ R KL LLSD G+ + + PR K +G+GHE SD L+ Y EW L
Sbjct: 64 KKKPRAPRVKLDETRLLSDKGIPKLRKMAPR-LKLKGKGHEFSDAARLLSFYQEWLDDLF 122
Query: 131 PYYSFDHFVSKVEQVAASRRVKMC----IRDLRDRVANGGDP--TKLHEAAVEHDGPVDE 184
P +F ++ VE+ ++ I +L+ R A D ++H AV GP +
Sbjct: 123 PKATFLDALAMVEKTGHKTTMRSARQKWIDELKPRAAIEEDEEDNRIHRGAV---GP--Q 177
Query: 185 QAPAEAMSSERQPHQQDPASNVHAADDF--NDLFN 217
Q P A E + DD +DL+N
Sbjct: 178 QPPKVASIFETTAKAAGERAKTPTTDDLFGDDLYN 212
>gi|405955204|gb|EKC22409.1| TIMELESS-interacting protein [Crassostrea gigas]
Length = 445
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
Query: 72 KKLPRSRPKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHLLP 131
K + R +PKL L + G+ + + F + K++G+GHE DL ++ W L P
Sbjct: 65 KVVRRPQPKLDATRLTGERGIPILPKVF-QDVKFKGKGHEARDLQIIMRYLEHWAHRLFP 123
Query: 132 YYSFDHFVSKVEQVAASRRVKMCIRDLR 159
FD + ++E++ VK CI+ +R
Sbjct: 124 KMPFDEVLERIEKLGTKNEVKTCIKRMR 151
>gi|428176795|gb|EKX45678.1| timeless-interacting protein [Guillardia theta CCMP2712]
Length = 419
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 86 LLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHLLPYYSFDHFVSKVEQV 145
L+S DGL + R F R K++G+GHE +DL ++ Y EW L P SFD + KVE V
Sbjct: 48 LISPDGLTKLYRIF-RDTKFKGKGHEKTDLKLMMSKYQEWAYQLCPALSFDDVIFKVESV 106
Query: 146 AASRRVKMCIRDLRDRVAN 164
+ ++ + R+ A+
Sbjct: 107 GNTFMIQRALDAYREVEAD 125
>gi|346465039|gb|AEO32364.1| hypothetical protein [Amblyomma maculatum]
Length = 299
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 78 RPKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHLLPYYSFDH 137
RPKL D L S G+ +LR + ++RG+G+E+ DL + + W L P D+
Sbjct: 54 RPKLNKDRLASGKGIPELLR-MSKNIQWRGKGNELHDLDTALSVLEHWSHRLFPQLDSDN 112
Query: 138 FVSKVEQVAASRRVKMCIRDLR 159
F S +E++ R V+ +R LR
Sbjct: 113 FFSTLERLGTKREVQTYMRKLR 134
>gi|315040527|ref|XP_003169641.1| chromosome segregation in meiosis protein 3 [Arthroderma gypseum
CBS 118893]
gi|311346331|gb|EFR05534.1| chromosome segregation in meiosis protein 3 [Arthroderma gypseum
CBS 118893]
Length = 317
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 56/107 (52%), Gaps = 7/107 (6%)
Query: 85 LLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHLLPYYSFDHFVSKVEQ 144
LLLS DG+ + + ++ K +G+GHE SD G L+ Y W L P F ++ +E+
Sbjct: 74 LLLSQDGIPKLRKMARKSLKIKGKGHEFSDAGRLLNFYRLWLDELYPRAKFADTLTIIEK 133
Query: 145 VAASRRVKMCIRDL------RDRVANGGDPTKLHEAAVEHDGPVDEQ 185
+ S+R+++ R+ R V + G +L + +VE D P E+
Sbjct: 134 LGHSKRIQVMRREWIDEGKPRSEVDDDG-FKELGDISVEQDLPTREK 179
>gi|328792519|ref|XP_003251739.1| PREDICTED: protein TIPIN homolog [Apis mellifera]
Length = 262
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 70/149 (46%), Gaps = 12/149 (8%)
Query: 79 PKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHLLPYYSFDHF 138
PKL + L G+ + ++F FKY +G+E DL ++ W L P FD F
Sbjct: 67 PKLNTERLKGPKGIHTIEKYFE-GFKYYEKGYEKLDLDRIMKRLEHWGHRLFPKLDFDDF 125
Query: 139 VSKVEQVAASRRVKMCIRDLRDRVAN------GGDPTKLHEAAVEHDGPVDE--QAPAEA 190
+ ++E++ + +++ I+ R + N D E E D P+DE AE
Sbjct: 126 LERLEKLGTKKDLQVFIKKYRQDMINEDIDIINQDNNIDIEENKEQDEPIDEFDLLIAEQ 185
Query: 191 MSSERQPHQQDPASNVHAADDFNDLFNKV 219
+ ++Q QQ + N+ +D D+F+K+
Sbjct: 186 IEKQKQVMQQ-SSFNIVTTND--DVFDKL 211
>gi|327356424|gb|EGE85281.1| chromosome segregation in meiosis protein 3 [Ajellomyces
dermatitidis ATCC 18188]
Length = 345
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 54/100 (54%), Gaps = 2/100 (2%)
Query: 63 SAIGVKEKPKKLPRSRP--KLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIG 120
+++G+ E+ K P+ RP KL LLS G+ + ++ K+RG+GHE SD L+
Sbjct: 61 ASLGLDEEIKVAPKRRPVAKLDEARLLSPAGIPKLRKNAKTKLKFRGKGHEYSDAMRLLN 120
Query: 121 LYSEWHSHLLPYYSFDHFVSKVEQVAASRRVKMCIRDLRD 160
Y W L P F ++ +E++ S+R+++ ++ D
Sbjct: 121 FYQLWLDDLYPRAKFADGLAMIEKLGHSKRIQIMRKEWID 160
>gi|380023706|ref|XP_003695654.1| PREDICTED: protein TIPIN homolog [Apis florea]
Length = 309
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 76/161 (47%), Gaps = 15/161 (9%)
Query: 79 PKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHLLPYYSFDHF 138
PKL + L G+ + ++F FKY +G+E DL ++ W L P FD F
Sbjct: 115 PKLNTERLKGPKGIHTIEKYF-EGFKYYEKGYEKLDLDRIMKRLEHWGHRLFPKLDFDDF 173
Query: 139 VSKVEQVAASRRVKMCIRDLRDRVAN------GGDPTKLHEAAVEHDGPVDE--QAPAEA 190
+ ++E++ + +++ I+ R + N D E E D P+DE AE
Sbjct: 174 LERLEKLGTKKDLQVFIKKYRQDMINEDIDIINQDNIDAEENK-EQDEPIDEFDLLIAEQ 232
Query: 191 MSSERQPHQQDPASNVHAADDFNDLFNKVY-RTATEVSIFS 230
+ ++Q QQ + NV A + ND F+K+ + T S+F+
Sbjct: 233 IEKQKQVMQQ--SFNVAATN--NDAFDKLLSESNTANSLFT 269
>gi|261188109|ref|XP_002620471.1| replication fork protection component Swi3 [Ajellomyces
dermatitidis SLH14081]
gi|239593346|gb|EEQ75927.1| replication fork protection component Swi3 [Ajellomyces
dermatitidis SLH14081]
gi|239609088|gb|EEQ86075.1| chromosome segregation in meiosis protein 3 [Ajellomyces
dermatitidis ER-3]
Length = 345
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 54/100 (54%), Gaps = 2/100 (2%)
Query: 63 SAIGVKEKPKKLPRSRP--KLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIG 120
+++G+ E+ K P+ RP KL LLS G+ + ++ K+RG+GHE SD L+
Sbjct: 61 ASLGLDEEIKVAPKRRPVAKLDEARLLSPAGIPKLRKNAKTKLKFRGKGHEYSDAMRLLN 120
Query: 121 LYSEWHSHLLPYYSFDHFVSKVEQVAASRRVKMCIRDLRD 160
Y W L P F ++ +E++ S+R+++ ++ D
Sbjct: 121 FYQLWLDDLYPRAKFADGLAMIEKLGHSKRIQIMRKEWID 160
>gi|195387980|ref|XP_002052670.1| GJ17680 [Drosophila virilis]
gi|194149127|gb|EDW64825.1| GJ17680 [Drosophila virilis]
Length = 297
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Query: 62 KSAIGVKEKPKKLPRSRPKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGL 121
+ A+ V+ K + + RP+LT D L GL + +F + KY+G+GHE +DL ++
Sbjct: 53 QEAVKVEPKKRAVRNPRPRLTVDTLRGPRGLHTIENYF-KDIKYKGKGHEKADLDEILRR 111
Query: 122 YSEWHSHLLPYYSFDHFVSKVEQVAASRRVKM 153
W + P Y+FD ++ +E++ + +++
Sbjct: 112 LQHWGHRMYPNYTFDDVLNNIERLGNKKPLQV 143
>gi|240848993|ref|NP_001155740.1| TIMELESS-interacting protein [Acyrthosiphon pisum]
gi|239789778|dbj|BAH71491.1| ACYPI008045 [Acyrthosiphon pisum]
Length = 221
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 51/100 (51%), Gaps = 1/100 (1%)
Query: 78 RPKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHLLPYYSFDH 137
+PKL P+ L GL VL + + +G+GHE DL +I +W L P Y+FD
Sbjct: 51 QPKLNPERLRGTRGLS-VLPTWFENIQLKGKGHESEDLNAVINRLEQWTHRLFPRYTFDD 109
Query: 138 FVSKVEQVAASRRVKMCIRDLRDRVANGGDPTKLHEAAVE 177
+ K+E++ +K+ ++ +R + T++ + VE
Sbjct: 110 CIDKLEKLGKKNEIKVMLKRIRMDMDINNCVTQVEDDVVE 149
>gi|367034191|ref|XP_003666378.1| hypothetical protein MYCTH_2311002 [Myceliophthora thermophila ATCC
42464]
gi|347013650|gb|AEO61133.1| hypothetical protein MYCTH_2311002 [Myceliophthora thermophila ATCC
42464]
Length = 442
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 54/109 (49%), Gaps = 9/109 (8%)
Query: 72 KKLPRS-RPKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHLL 130
K+ PR+ R KL LLSD G+ + + PR K++G+GHE SD L+ Y EW L
Sbjct: 65 KRRPRAPRVKLDEARLLSDKGIPKLRKMAPR-LKFKGKGHEFSDAARLLSFYQEWLDDLF 123
Query: 131 PYYSFDHFVSKVEQVAASRRVKMCIRDLRDRVANGGDPTKLHEAAVEHD 179
P +F ++ VE+ K +R+ R + D TK A E D
Sbjct: 124 PKATFLDALAMVEKTGH----KTVMRNARLKWI---DETKPRAATAEDD 165
>gi|425777730|gb|EKV15886.1| hypothetical protein PDIG_22410 [Penicillium digitatum PHI26]
gi|425782712|gb|EKV20608.1| hypothetical protein PDIP_14800 [Penicillium digitatum Pd1]
Length = 270
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 66/144 (45%), Gaps = 18/144 (12%)
Query: 34 NSNFPSNNTASGGGGGGSGVGDGGVSVSKSAIGVKEKPKKLPRSRP--KLTPDLLLSDDG 91
+ N P+ N+A G G S +G +G+ E+ K + P KL LLS G
Sbjct: 34 DENAPNANSAKASGTGDSALG----------LGLDEEVKVTKKRHPVVKLDEGRLLSQPG 83
Query: 92 LGFVLRHFPRA-FKYRGRGHEVSDLGHLIGLYSEWHSHLLPYYSFDHFVSKVEQVAASRR 150
+ LRH R K++G+G E D L+ Y W L P F ++ +E++ S+R
Sbjct: 84 IP-KLRHTARQRLKFKGKGQEFKDAARLLNFYQLWLDDLFPRAKFADGLAMIEKLGHSKR 142
Query: 151 VKMC----IRDLRDRVANGGDPTK 170
++ I + + R NG PT+
Sbjct: 143 IQAMRREWIEEEKPRGFNGSGPTR 166
>gi|198475026|ref|XP_001356899.2| GA10251 [Drosophila pseudoobscura pseudoobscura]
gi|198138645|gb|EAL33965.2| GA10251 [Drosophila pseudoobscura pseudoobscura]
Length = 301
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 61/129 (47%), Gaps = 11/129 (8%)
Query: 66 GVKEKPKK--LPRSRPKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYS 123
GVK +PKK + RP+LT D L G+ + +F + K +G+GHE SDL ++
Sbjct: 52 GVKVEPKKRAVRNPRPRLTVDTLRGPRGIHTIENYF-KDVKLKGKGHEKSDLDEVLRRLQ 110
Query: 124 EWHSHLLPYYSFDHFVSKVE--------QVAASRRVKMCIRDLRDRVANGGDPTKLHEAA 175
W + P Y+FD ++ +E QV SR + DLR + + D + +
Sbjct: 111 HWGHRMYPTYTFDDVLNNIERLGKKKPLQVHMSRYRLGQLEDLRMQEGDAVDDGQEEQND 170
Query: 176 VEHDGPVDE 184
D P DE
Sbjct: 171 DAADEPFDE 179
>gi|451996957|gb|EMD89423.1| hypothetical protein COCHEDRAFT_1141634 [Cochliobolus
heterostrophus C5]
Length = 266
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 60/133 (45%), Gaps = 12/133 (9%)
Query: 28 SSSAPSNSNFPSNNTASGGGGGGSGVGDGGVSVSKSAIGVKEKPKKLPRSRPKLTPDLLL 87
S+ P P S G GV D + ++K K +P PKL LL
Sbjct: 32 ESTEPPTQPEPWRKNKSQGADTSLGV-DEDIVITK-----KRQPA------PKLDDQRLL 79
Query: 88 SDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHLLPYYSFDHFVSKVEQVAA 147
SD G+ + R +++G+GHE D+ ++ +Y W L P F ++ +E+V
Sbjct: 80 SDPGIPRLRRISKDRLRFKGKGHEYGDIARMLNMYQLWLDDLYPRAKFADALAIIEKVGH 139
Query: 148 SRRVKMCIRDLRD 160
++R+++ +D D
Sbjct: 140 TKRMQIMRKDWID 152
>gi|326470310|gb|EGD94319.1| replication fork protection component Swi3 [Trichophyton tonsurans
CBS 112818]
gi|326481149|gb|EGE05159.1| chromosome segregation in meiosis protein 3 [Trichophyton equinum
CBS 127.97]
Length = 307
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 58/120 (48%), Gaps = 10/120 (8%)
Query: 86 LLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHLLPYYSFDHFVSKVEQV 145
LLS DG+ + + + K +GRGHE SD G L+ Y W L P F ++ +E++
Sbjct: 71 LLSQDGIPRLRKMARTSLKLKGRGHEFSDAGRLLNFYRLWLDELYPRAKFTDTLATIEKL 130
Query: 146 AASRRVKMCIRDLRD----RVANGGDPTKLHEAAVEHDGPVDEQAPAEAMSSERQPHQQD 201
S+RV++ R+ D R D +L +E D P E+ E E +P+ +D
Sbjct: 131 GHSKRVQVMRREWIDEGKPRPEVDDDDFRL---GIEQDLPTREK---ENQQDEARPNAED 184
>gi|350419337|ref|XP_003492147.1| PREDICTED: TIMELESS-interacting protein-like [Bombus impatiens]
Length = 371
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 74/149 (49%), Gaps = 13/149 (8%)
Query: 79 PKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHLLPYYSFDHF 138
PKL + L G+ + ++F FK+ G+G+E DL ++ W L P FD F
Sbjct: 154 PKLNTERLKGPKGIHTIEKYFE-GFKFHGQGYEKLDLDRVMKRLEHWGHRLFPKLDFDDF 212
Query: 139 VSKVEQVAASRRVKMCIRDLRDRVANGGDPTKLHEAAVE------HDGPVDE--QAPAEA 190
+ ++E++ + +++ I+ R + N D ++E ++ D P+DE AE
Sbjct: 213 LERLEKLGTKKDLQVFIKKYRQDMIN-EDNDIINEDNIDAEENIVQDEPIDEFDLLIAEQ 271
Query: 191 MSSERQPHQQDPASNVHAADDFNDLFNKV 219
+ +++ QQ A NV + ND+F+K+
Sbjct: 272 IEKQKKVMQQ-TAINVPTTN--NDVFDKL 297
>gi|242794436|ref|XP_002482373.1| replication fork protection component Swi3, putative [Talaromyces
stipitatus ATCC 10500]
gi|218718961|gb|EED18381.1| replication fork protection component Swi3, putative [Talaromyces
stipitatus ATCC 10500]
Length = 295
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 82/202 (40%), Gaps = 30/202 (14%)
Query: 32 PSNSNFPSNNTASGGGGGGSGVG----DGGVSVSKSAIGVKEKPKKLPRSRPKLTPDLLL 87
PS N ++ T G D + V+K + + KL +R LL
Sbjct: 22 PSAQNKETSQTEKGNNDEPDATKVLGLDADLKVTKQRVPIA----KLDEAR-------LL 70
Query: 88 SDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHLLPYYSFDHFVSKVEQVAA 147
S G+ + + K++G+ HE SDLG L+ Y W L P F ++ +E++
Sbjct: 71 SQKGIPKLRKDVKTKLKFKGKAHEFSDLGRLLNFYQLWLDDLYPRAKFADGLAMIEKLGH 130
Query: 148 SRRVKMCIRDLRDRVANGGDPTKLHEAAVE----HD--GPVDE--QAPAEAMSSERQPHQ 199
S+R+++ R+ N P L A E HD PV E +AP ++
Sbjct: 131 SKRIQIMRREW----INEEKPDYLRNADDEDHNNHDNSNPVAERDEAPGAQTATNNDTSA 186
Query: 200 QDPASNVHAADDFNDLFNKVYR 221
+NV DD DLF + R
Sbjct: 187 D---ANVPLDDDMEDLFGEAPR 205
>gi|195148689|ref|XP_002015300.1| GL19629 [Drosophila persimilis]
gi|194107253|gb|EDW29296.1| GL19629 [Drosophila persimilis]
Length = 301
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 61/129 (47%), Gaps = 11/129 (8%)
Query: 66 GVKEKPKK--LPRSRPKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYS 123
GVK +PKK + RP+LT D L G+ + +F + K +G+GHE +DL ++
Sbjct: 52 GVKVEPKKRAVRNPRPRLTVDTLRGPRGIHTIENYF-KDVKLKGKGHEKTDLDEVLRRLQ 110
Query: 124 EWHSHLLPYYSFDHFVSKVE--------QVAASRRVKMCIRDLRDRVANGGDPTKLHEAA 175
W + P Y+FD ++ +E QV SR + DLR + + D + +
Sbjct: 111 HWGHRMYPTYTFDDVLNNIERLGKKKPLQVHMSRYRLGQLEDLRMQEGDAVDDGQEEQND 170
Query: 176 VEHDGPVDE 184
D P DE
Sbjct: 171 DAADEPFDE 179
>gi|451847861|gb|EMD61168.1| hypothetical protein COCSADRAFT_184041 [Cochliobolus sativus
ND90Pr]
Length = 266
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 54/107 (50%), Gaps = 5/107 (4%)
Query: 54 GDGGVSVSKSAIGVKEKPKKLPRSRPKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVS 113
D G+ V + + K++ + PKL LLSD G+ + R +++G+GHE
Sbjct: 51 ADTGLGVDEDIVITKKR-----QPAPKLDDQRLLSDPGIPRLRRISKDRLRFKGKGHEYG 105
Query: 114 DLGHLIGLYSEWHSHLLPYYSFDHFVSKVEQVAASRRVKMCIRDLRD 160
D+ ++ +Y W L P F ++ +E+V ++R+++ +D D
Sbjct: 106 DIARMLNMYQLWLDDLYPRAKFADALAIIEKVGHTKRMQIMRKDWID 152
>gi|452977652|gb|EME77418.1| hypothetical protein MYCFIDRAFT_83337 [Pseudocercospora fijiensis
CIRAD86]
Length = 332
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 50/92 (54%), Gaps = 4/92 (4%)
Query: 65 IGVKEKPKKLPRSRPKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSE 124
+ VK+K + +P KL + LLS+ G+ + + K+RG+GHE SD+ L+ Y
Sbjct: 59 VQVKKKRQPIP----KLDENRLLSEAGIPKLRKITKSRVKFRGKGHEFSDISRLLNTYQL 114
Query: 125 WHSHLLPYYSFDHFVSKVEQVAASRRVKMCIR 156
W L P F ++ +E+V S+R+++ R
Sbjct: 115 WLDDLYPRAKFRDALTMLEKVGHSKRMQVMRR 146
>gi|212535958|ref|XP_002148135.1| replication fork protection component Swi3, putative [Talaromyces
marneffei ATCC 18224]
gi|210070534|gb|EEA24624.1| replication fork protection component Swi3, putative [Talaromyces
marneffei ATCC 18224]
Length = 323
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 2/95 (2%)
Query: 65 IGVKE--KPKKLPRSRPKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLY 122
+G+ E KP K KL LLS G+ + + K++G+GHE SDLG L+ Y
Sbjct: 42 LGLDEDIKPTKQRAPIAKLDEARLLSQRGIPKLRKDVRTKLKFKGKGHEFSDLGRLLNFY 101
Query: 123 SEWHSHLLPYYSFDHFVSKVEQVAASRRVKMCIRD 157
W L P F ++ +E++ ++RV++ R+
Sbjct: 102 QLWLDDLYPRAKFADGLAMIEKLGHTKRVQIMRRE 136
>gi|121714257|ref|XP_001274739.1| replication fork protection component Swi3, putative [Aspergillus
clavatus NRRL 1]
gi|158512614|sp|A1C8Y9.1|CSM3_ASPCL RecName: Full=Chromosome segregation in meiosis protein 3
gi|119402893|gb|EAW13313.1| replication fork protection component Swi3, putative [Aspergillus
clavatus NRRL 1]
Length = 267
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 66/138 (47%), Gaps = 3/138 (2%)
Query: 59 SVSKSAIGVKEKPKKLPRSRP--KLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLG 116
++S +G+ E+ K + +P KL LLS G+ + R K+RGRGHE SD
Sbjct: 51 AMSGLGLGLDEEVKVTKKRQPIAKLDERRLLSQPGIPKLRRTAKAKLKFRGRGHEFSDAA 110
Query: 117 HLIGLYSEWHSHLLPYYSFDHFVSKVEQVAASRRVKMCIRDLRDRVANGGDPTKLHEAAV 176
L+ Y W +L P F ++ +E++ S+R++ R+ + T + +
Sbjct: 111 RLLNFYQLWLDNLFPRAKFADGLAMIERLGHSKRLQTIRREWIEE-EKPQISTDIQAGSP 169
Query: 177 EHDGPVDEQAPAEAMSSE 194
+ + P D Q A++SE
Sbjct: 170 QINLPADTQTDHTALASE 187
>gi|296819623|ref|XP_002849877.1| chromosome segregation in meiosis protein 3 [Arthroderma otae CBS
113480]
gi|238840330|gb|EEQ29992.1| chromosome segregation in meiosis protein 3 [Arthroderma otae CBS
113480]
Length = 310
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 52/102 (50%), Gaps = 2/102 (1%)
Query: 61 SKSAIGVKEKPKKLPRSRP--KLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHL 118
S S +G+ ++ K + P +L +LS +G+ + + K +GRGHE SD G L
Sbjct: 43 SNSTLGIDDELKVSKKRAPISQLDESRILSQEGIPKLRKMAKTNLKLKGRGHEFSDAGRL 102
Query: 119 IGLYSEWHSHLLPYYSFDHFVSKVEQVAASRRVKMCIRDLRD 160
+ Y W L P F ++ +E++ S+R+++ ++ D
Sbjct: 103 LNFYRLWLDELYPRAKFSDTLTMIEKLGHSKRIQVMRKEWMD 144
>gi|358057431|dbj|GAA96780.1| hypothetical protein E5Q_03451 [Mixia osmundae IAM 14324]
Length = 344
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 52/103 (50%), Gaps = 6/103 (5%)
Query: 68 KEKPKKLPRSRPKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHS 127
KEK K++ K+ D LLS GL L+ FK +G+GHE+ DL L+ +Y+ W
Sbjct: 159 KEKKKRV-----KMDTDRLLSAKGL-VKLKESAERFKIKGKGHEMEDLKRLLSMYTLWAH 212
Query: 128 HLLPYYSFDHFVSKVEQVAASRRVKMCIRDLRDRVANGGDPTK 170
+ P SF +S+ E + +R V +++ R P+K
Sbjct: 213 QMNPMGSFHDTISRCENLCKTRLVVSQMKEWRSEFMASKYPSK 255
>gi|259483717|tpe|CBF79336.1| TPA: replication fork protection component Swi3, putative
(AFU_orthologue; AFUA_4G04745) [Aspergillus nidulans
FGSC A4]
Length = 304
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 51/94 (54%), Gaps = 2/94 (2%)
Query: 65 IGVKEKPKKLPRSRP--KLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLY 122
+G+ E+ + R +P KL + LL+ G+ + R ++ +++G+GHE SDL L+ Y
Sbjct: 58 LGLDEEVEVAKRRQPVAKLDENRLLTQAGIPKLRRSAKKSLRFKGKGHEFSDLARLLNFY 117
Query: 123 SEWHSHLLPYYSFDHFVSKVEQVAASRRVKMCIR 156
W L P F ++ +E++ S+R++ R
Sbjct: 118 QLWLDDLFPRAKFVDGLAMIERLGHSKRLQTMRR 151
>gi|194880084|ref|XP_001974362.1| GG21125 [Drosophila erecta]
gi|190657549|gb|EDV54762.1| GG21125 [Drosophila erecta]
Length = 320
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 64/131 (48%), Gaps = 6/131 (4%)
Query: 34 NSNFPSNNTASGGGGGGSGV-----GDGGVSVSKSAIGVKEKPKKLPRSRPKLTPDLLLS 88
N N P++ G G + +GG S+ A V+ K + + RP+LT + L
Sbjct: 28 NDNLPTDPDQLPSDGEGEKLFADDEENGGKPGSQDAQAVEPKKRAVRNPRPRLTVETLRG 87
Query: 89 DDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHLLPYYSFDHFVSKVEQVAAS 148
G+ + +F + K++G+G+E +DL ++ W + P Y+FD ++ +E++
Sbjct: 88 PRGIQTIEDYF-KDIKFKGKGYEKTDLDEVLRRLQHWGHRMYPTYTFDDVLNNIERLGKK 146
Query: 149 RRVKMCIRDLR 159
+ +++ + R
Sbjct: 147 KPLQVHMARYR 157
>gi|307195206|gb|EFN77190.1| Protein TIPIN-like protein [Harpegnathos saltator]
Length = 367
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 79 PKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHLLPYYSFDHF 138
PKL + L +G+ + ++F FK+ G+G+E DL ++ W L P Y FD F
Sbjct: 112 PKLNTERLKGPNGIQTIEKYF-EGFKFYGKGYEKVDLNRIMKRLEHWSHRLFPKYHFDDF 170
Query: 139 VSKVEQVAASRRVKMCIRDLR 159
+++ EQ+ + + +++ ++ R
Sbjct: 171 LARAEQLGSKKDLQVYMKKYR 191
>gi|390597911|gb|EIN07310.1| Swi3-domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 451
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 58/114 (50%), Gaps = 8/114 (7%)
Query: 62 KSAIGVKEKPKKLPRSRPKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGL 121
K A G K++ KK+ R L LL DG ++R + +K +G+GHE SDL L+ +
Sbjct: 142 KDANGEKKERKKIAR----LDEARLLGSDGFPALIRQT-KHWKPKGKGHEHSDLNSLLQI 196
Query: 122 YSEWHSHLLPYYSFDHFVSKVEQVAASRRVKMCIRDLRDR---VANGGDPTKLH 172
Y W + P F V VE++ S+R+ + + +D + NG P +++
Sbjct: 197 YQFWAHKMYPKTHFRDTVKTVEKLCHSKRMHVALSVWKDEAKGLVNGQKPEQIN 250
>gi|452839890|gb|EME41829.1| hypothetical protein DOTSEDRAFT_55546 [Dothistroma septosporum
NZE10]
Length = 326
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 41/76 (53%)
Query: 79 PKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHLLPYYSFDHF 138
PKL + LLS G+ + + K+RG+GHE SD+ L+ Y W L P F
Sbjct: 70 PKLDENRLLSQAGIPKLRKIAKTRLKFRGKGHEFSDMSRLLNTYQLWLDDLYPRAKFRDA 129
Query: 139 VSKVEQVAASRRVKMC 154
++ VE+V S+R+++
Sbjct: 130 LTMVEKVGHSKRMQVV 145
>gi|195115006|ref|XP_002002058.1| GI17174 [Drosophila mojavensis]
gi|193912633|gb|EDW11500.1| GI17174 [Drosophila mojavensis]
Length = 294
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 52/99 (52%), Gaps = 1/99 (1%)
Query: 61 SKSAIGVKEKPKKLPRSRPKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIG 120
+ A+ V+ K + + RP+LT D L GL + +F + K++G+G+E DL ++
Sbjct: 53 EQKAVKVEPKKRAVRNPRPRLTVDTLRGPRGLHTIENYF-KDIKFKGKGYEKDDLNEVLR 111
Query: 121 LYSEWHSHLLPYYSFDHFVSKVEQVAASRRVKMCIRDLR 159
W + P Y+FD ++ +E++ + +++ + R
Sbjct: 112 RLQHWGHRMYPNYTFDDILNNIERLGKKKPLQVHMTRYR 150
>gi|395746904|ref|XP_002825641.2| PREDICTED: TIMELESS-interacting protein-like, partial [Pongo
abelii]
Length = 143
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%)
Query: 96 LRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHLLPYYSFDHFVSKVEQVAASRRVKMCI 155
LRH K++G+GHE DL LI W L P F+ F+ +VE + + + V+ C+
Sbjct: 66 LRHVFDKAKFKGKGHEAEDLKMLIRHMEHWAHRLFPKLQFEDFIDRVEYLGSKKEVQTCL 125
Query: 156 RDLR 159
+ +R
Sbjct: 126 KRIR 129
>gi|302691418|ref|XP_003035388.1| hypothetical protein SCHCODRAFT_232833 [Schizophyllum commune H4-8]
gi|300109084|gb|EFJ00486.1| hypothetical protein SCHCODRAFT_232833 [Schizophyllum commune H4-8]
Length = 435
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 51/106 (48%), Gaps = 10/106 (9%)
Query: 56 GGVSVSKSAIGVKEKPKKLPRSRPKLTPDLLLSDDGLGF-VLRHFPRAFKYRGRGHEVSD 114
GG K + KP L SR L+S +GF L + FK +G+GHE +D
Sbjct: 122 GGAKAGKDGEKKRRKPIVLDESR-------LIS--PIGFPQLIEDTKNFKIKGKGHEATD 172
Query: 115 LGHLIGLYSEWHSHLLPYYSFDHFVSKVEQVAASRRVKMCIRDLRD 160
L L+ +Y W + P F+ V ++E++ SRR+ + +RD
Sbjct: 173 LNRLLNIYQFWAHRMYPRTQFNDTVERIEKLCHSRRMHNQLGMMRD 218
>gi|171683153|ref|XP_001906519.1| hypothetical protein [Podospora anserina S mat+]
gi|170941536|emb|CAP67188.1| unnamed protein product [Podospora anserina S mat+]
Length = 425
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 2/79 (2%)
Query: 67 VKEKPKKLPRSRPKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWH 126
V +K ++PR KL LLSD G+ ++ ++ K +G+GHE SD ++ Y EW
Sbjct: 73 VDKKKARVPRV--KLDDARLLSDKGIPWLRKNAQSRLKLKGKGHEFSDAARMLSFYQEWL 130
Query: 127 SHLLPYYSFDHFVSKVEQV 145
L P SF ++ VE+
Sbjct: 131 DELFPKASFLDALAMVEKA 149
>gi|405122846|gb|AFR97612.1| hypothetical protein CNAG_04603 [Cryptococcus neoformans var.
grubii H99]
Length = 390
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query: 80 KLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHLLPYYSFDHFV 139
K+ D LLS++G+ + R + FK RG+G E DL ++ +Y W + P F H +
Sbjct: 176 KVDADRLLSENGIPALCRAA-KKFKPRGKGREADDLRQVLNMYQMWAHGMFPKGDFAHTM 234
Query: 140 SKVEQVAASRRVKMCIRDLRD 160
+ E V SRR++ + +D
Sbjct: 235 HRTETVCRSRRMESALSGFKD 255
>gi|367041748|ref|XP_003651254.1| hypothetical protein THITE_2111309 [Thielavia terrestris NRRL 8126]
gi|346998516|gb|AEO64918.1| hypothetical protein THITE_2111309 [Thielavia terrestris NRRL 8126]
Length = 342
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 72 KKLPRS-RPKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHLL 130
K+ PR+ R KL LLSD G+ + R P+ K +G+GHE SD L+ Y EW L
Sbjct: 64 KRKPRAPRVKLDETRLLSDKGIPRLRRMAPK-LKLKGKGHEFSDAARLLSFYQEWLDDLF 122
Query: 131 PYYSFDHFVSKVEQ 144
P +F ++ VE+
Sbjct: 123 PKATFLDALAMVEK 136
>gi|302884189|ref|XP_003040991.1| hypothetical protein NECHADRAFT_36875 [Nectria haematococca mpVI
77-13-4]
gi|256721886|gb|EEU35278.1| hypothetical protein NECHADRAFT_36875 [Nectria haematococca mpVI
77-13-4]
Length = 271
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 53/114 (46%), Gaps = 10/114 (8%)
Query: 63 SAIGVKEKPKKLPRSRP---KLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLI 119
S +G+ E+ R+R KL D LL G+ LR R K +G+GHE SD G L+
Sbjct: 42 SGLGIDEEVDVKKRARAPNVKLDEDRLLGPKGIP-KLRQRARDLKIKGKGHEFSDAGRLL 100
Query: 120 GLYSEWHSHLLPYYSFDHFVSKVEQVAASRRVKMCIRDL------RDRVANGGD 167
Y W L P F ++ VE+ +R+ + + +D +ANG D
Sbjct: 101 SFYQLWLDDLFPKAKFLDALAMVEKAGHKKRIVIARNEWINEGKPKDHIANGED 154
>gi|321258466|ref|XP_003193954.1| hypothetical protein CGB_D9370W [Cryptococcus gattii WM276]
gi|317460424|gb|ADV22167.1| hypothetical protein CNBJ3080 [Cryptococcus gattii WM276]
Length = 402
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query: 80 KLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHLLPYYSFDHFV 139
K+ D LLS+ G+ + R + FK RG+GHE DL ++ +Y W + P F + +
Sbjct: 176 KVDADRLLSEKGIPALCRA-AKKFKPRGKGHEADDLRWVLNMYQMWAHGMFPKGDFAYTM 234
Query: 140 SKVEQVAASRRVKMCIRDLRD 160
+ E V SRR++ + RD
Sbjct: 235 HRTETVCRSRRMESALSGFRD 255
>gi|327292497|ref|XP_003230947.1| replication fork protection component Swi3 [Trichophyton rubrum CBS
118892]
gi|326466884|gb|EGD92337.1| replication fork protection component Swi3 [Trichophyton rubrum CBS
118892]
Length = 300
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 41/75 (54%)
Query: 86 LLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHLLPYYSFDHFVSKVEQV 145
LLS DG+ + + + K +G+GHE SD G L+ Y W L P F ++ +E++
Sbjct: 71 LLSQDGIPRLRKMARTSLKLKGKGHEFSDAGRLLNFYRLWLDELYPRAKFTDTLATIEKL 130
Query: 146 AASRRVKMCIRDLRD 160
S+R+++ R+ D
Sbjct: 131 GHSKRLQVMRREWID 145
>gi|119179560|ref|XP_001241352.1| hypothetical protein CIMG_08515 [Coccidioides immitis RS]
Length = 416
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 83/190 (43%), Gaps = 14/190 (7%)
Query: 50 GSGVGDGGV-SVSKSAIGVKEKPKKLPRSRP-KLTPDLLLSDDGLGFVLRHFPRAFKYRG 107
SG G G + + IG++E R+ P KL + LLS G+ + R K++G
Sbjct: 68 ASGTGTGSTENKNDDLIGLEEIKITRKRAPPVKLDENRLLSQAGIPKLRRSAKTKLKFKG 127
Query: 108 RGHEVSDLGHLIGLYSEWHSHLLPYYSFDHFVSKVEQVAASRRVKMCIRDLRDRVANGGD 167
+ HE SD+ L+ Y W L P F +S +E++ ++R+++ +R + G
Sbjct: 128 KRHEFSDVARLLNFYQLWLDDLYPRAKFADGLSIIEKLGHTKRMQV----MRKEWIDEGK 183
Query: 168 PTK-LHEAAV-------EHDGPVDEQAPAEAMSSERQPHQQDPASNVHAADDFNDLFNKV 219
P + L+++ V ++ G D P +R Q PA H D +
Sbjct: 184 PGRNLYDSNVTYLDPNSDNRGDKDTADPTIPSIFQRTLEQSAPAMEAHRNDQAESTHSPK 243
Query: 220 YRTATEVSIF 229
+ +E+ IF
Sbjct: 244 RLSDSEIPIF 253
>gi|328770723|gb|EGF80764.1| hypothetical protein BATDEDRAFT_33197 [Batrachochytrium
dendrobatidis JAM81]
Length = 374
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 50/104 (48%), Gaps = 1/104 (0%)
Query: 55 DGGVSVSKSAIGVKEKPKKLPRSRPKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSD 114
+GG S + SA R R KL + LLS GL +L+ + ++ G+G E+ +
Sbjct: 68 NGGTSSNVSATNDSSLMTNPLRVRAKLDEERLLSPTGLPLLLK-CAKKMRFGGKGSELKN 126
Query: 115 LGHLIGLYSEWHSHLLPYYSFDHFVSKVEQVAASRRVKMCIRDL 158
L L+ +Y W + P F F+ + E V RR+K+ + L
Sbjct: 127 LERLLKMYQIWGLEVYPKLKFGAFIERTENVCKKRRMKLFMMQL 170
>gi|336367629|gb|EGN95973.1| hypothetical protein SERLA73DRAFT_170413 [Serpula lacrymans var.
lacrymans S7.3]
gi|336380345|gb|EGO21498.1| hypothetical protein SERLADRAFT_417068 [Serpula lacrymans var.
lacrymans S7.9]
Length = 428
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 50/103 (48%), Gaps = 4/103 (3%)
Query: 69 EKPKKLPRSRPKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSH 128
E KK + PKL LL G ++R + F RG+GHE +DL ++ +Y W
Sbjct: 128 EDDKKERKKLPKLDDARLLGPSGFPQLIRDT-KNFVPRGKGHEAADLKSILQIYQFWTHK 186
Query: 129 LLPYYSFDHFVSKVEQVAASRRVKMCIRDLRDR---VANGGDP 168
+ P F V +VE++ S+R+ + + RD + NG P
Sbjct: 187 MFPKTQFRDTVDRVEKLCHSKRMHVALSVWRDEAKGLVNGQKP 229
>gi|400596685|gb|EJP64441.1| replication Fork Protection Component Swi3 [Beauveria bassiana
ARSEF 2860]
Length = 319
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 59/128 (46%), Gaps = 10/128 (7%)
Query: 55 DGGVSVSKSAIGVKEKPKKLPRSRPKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSD 114
D G+ + + + V+++P+ KL D LLSD G+ LR R K +G+GHE SD
Sbjct: 48 DAGLGIDEE-VDVQKRPRA---PTVKLDEDRLLSDAGIP-KLRKRARGLKLKGKGHEFSD 102
Query: 115 LGHLIGLYSEWHSHLLPYYSFDHFVSKVEQVAASRRVKMCIRDLRDRVANGGDPTKL-HE 173
+ L+ Y W L P F ++ VE+ +R+ R+ N G P H
Sbjct: 103 MSRLLSFYQLWLDDLYPKARFLDALAMVEKAGHKKRLMTA----RNEWLNEGRPQSADHT 158
Query: 174 AAVEHDGP 181
A + D P
Sbjct: 159 LAADGDDP 166
>gi|395333513|gb|EJF65890.1| Swi3-domain-containing protein [Dichomitus squalens LYAD-421 SS1]
Length = 441
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Query: 76 RSRPKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHLLPYYSF 135
+ RP L LL G +++ + FK +G+GHE+SDL L+ +Y W + P F
Sbjct: 153 KKRPVLDEGRLLGPQGFPALMKQT-KNFKPKGKGHELSDLNRLLTVYHFWAHEMYPNAQF 211
Query: 136 DHFVSKVEQVAASRRVKMCIRDLRDRV 162
V +VE++ S+R+ + + RD
Sbjct: 212 IDTVQRVEKLCHSKRMHVALGVWRDEA 238
>gi|403362434|gb|EJY80945.1| Swi3 domain containing protein [Oxytricha trifallax]
Length = 414
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 36/56 (64%)
Query: 105 YRGRGHEVSDLGHLIGLYSEWHSHLLPYYSFDHFVSKVEQVAASRRVKMCIRDLRD 160
++G+GHEVSDL L+G+Y WH + +P + +F ++++V + +K + LR+
Sbjct: 92 FKGQGHEVSDLRRLMGVYKAWHFNAMPKFEMGYFAERLQKVGTDKAMKGFMTKLRN 147
>gi|134116720|ref|XP_773032.1| hypothetical protein CNBJ3080 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50255652|gb|EAL18385.1| hypothetical protein CNBJ3080 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 386
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Query: 80 KLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHLLPYYSFDHFV 139
K+ D LL ++G+ + R + FK RG+G E DL ++ +Y W + P F H +
Sbjct: 177 KVDADRLLGENGIPALCRAA-KKFKPRGKGREADDLRRVLNMYQMWAHGMFPKGDFAHTM 235
Query: 140 SKVEQVAASRRVKMCIRDLRD 160
+ E V SRR++ + +D
Sbjct: 236 HRTETVCRSRRMESALSGFKD 256
>gi|442570086|sp|Q1DME8.2|CSM3_COCIM RecName: Full=Chromosome segregation in meiosis protein 3
gi|392866730|gb|EAS30096.2| chromosome segregation in meiosis protein 3 [Coccidioides immitis
RS]
Length = 337
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 83/190 (43%), Gaps = 14/190 (7%)
Query: 50 GSGVGDGGV-SVSKSAIGVKEKPKKLPRSRP-KLTPDLLLSDDGLGFVLRHFPRAFKYRG 107
SG G G + + IG++E R+ P KL + LLS G+ + R K++G
Sbjct: 33 ASGTGTGSTENKNDDLIGLEEIKITRKRAPPVKLDENRLLSQAGIPKLRRSAKTKLKFKG 92
Query: 108 RGHEVSDLGHLIGLYSEWHSHLLPYYSFDHFVSKVEQVAASRRVKMCIRDLRDRVANGGD 167
+ HE SD+ L+ Y W L P F +S +E++ ++R+++ +R + G
Sbjct: 93 KRHEFSDVARLLNFYQLWLDDLYPRAKFADGLSIIEKLGHTKRMQV----MRKEWIDEGK 148
Query: 168 PTK-LHEAAV-------EHDGPVDEQAPAEAMSSERQPHQQDPASNVHAADDFNDLFNKV 219
P + L+++ V ++ G D P +R Q PA H D +
Sbjct: 149 PGRNLYDSNVTYLDPNSDNRGDKDTADPTIPSIFQRTLEQSAPAMEAHRNDQAESTHSPK 208
Query: 220 YRTATEVSIF 229
+ +E+ IF
Sbjct: 209 RLSDSEIPIF 218
>gi|255935945|ref|XP_002558999.1| Pc13g05650 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211583619|emb|CAP91634.1| Pc13g05650 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 276
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 63/146 (43%), Gaps = 17/146 (11%)
Query: 37 FPSNNTASGGGGGGSGVGDGGVSVSKSAIGVKEKPKKLPRSRPKLTPDLLLSDDGLGFV- 95
P NN + SG GD + +G+ E+ K + +P D +D+ +
Sbjct: 32 IPDNNVPNTTSTKASGTGDSAL-----GLGLDEEVKVAKKRQPVAKLDEGRADEQASLLS 86
Query: 96 ------LRHFPR-AFKYRGRGHEVSDLGHLIGLYSEWHSHLLPYYSFDHFVSKVEQVAAS 148
LRH + K++G+GHE D L+ Y W L P F ++ +E++ S
Sbjct: 87 QPGIPKLRHTAKHKLKFKGKGHEFKDAARLLNFYQLWLDDLFPRAKFADGLTMIEKLGHS 146
Query: 149 RRVKMCIRDLRD----RVANGGDPTK 170
+R++ R+ D R+ + PT+
Sbjct: 147 KRIQAMRREWIDEEKPRLFDSSGPTR 172
>gi|170088376|ref|XP_001875411.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650611|gb|EDR14852.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 378
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 52/109 (47%), Gaps = 2/109 (1%)
Query: 53 VGDGGVSVSKSAIGVKEKPKKLPRSRP-KLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHE 111
GD K+ KE +K R RP +L LL G +++ + F+ G+GHE
Sbjct: 113 TGDRREEQGKTKGKDKEGDQKKERRRPAQLNEGRLLGPSGFPQLIKDV-KNFRIEGKGHE 171
Query: 112 VSDLGHLIGLYSEWHSHLLPYYSFDHFVSKVEQVAASRRVKMCIRDLRD 160
+DL L+ +Y W L P F V +VE++ SRR+ + + RD
Sbjct: 172 ATDLNRLLQVYQFWTHSLYPKTPFRDTVERVEKLCHSRRMNVSLSVWRD 220
>gi|198412638|ref|XP_002125470.1| PREDICTED: similar to GJ17680 [Ciona intestinalis]
Length = 136
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 2/89 (2%)
Query: 66 GVKEKPKKLPRSRPKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEW 125
G +K + + R PKL LL GL + +F + +++G+GHE DL L+G W
Sbjct: 50 GTTKKKRTINRG-PKLDSKRLLGARGLPAIDSYF-KGIQFKGKGHEFKDLDMLMGKIEHW 107
Query: 126 HSHLLPYYSFDHFVSKVEQVAASRRVKMC 154
L P Y+FD + K+E + + +++
Sbjct: 108 AHRLYPKYTFDDCLEKIEALGHKKEIQVL 136
>gi|322704197|gb|EFY95795.1| replication fork protection component Swi3 [Metarhizium anisopliae
ARSEF 23]
Length = 282
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 43/90 (47%), Gaps = 4/90 (4%)
Query: 65 IGVKEKPKKLPRSRP---KLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGL 121
+G+ E+ R+RP KL D LL GL LR R K +G+GHE SD L+
Sbjct: 48 LGIDEEVSVQKRARPPLVKLDEDRLLGPAGLP-KLRQRARELKIKGKGHEFSDAARLLSF 106
Query: 122 YSEWHSHLLPYYSFDHFVSKVEQVAASRRV 151
Y W L P F ++ VE+ +RV
Sbjct: 107 YQMWLDDLFPKAKFLDALAMVEKAGHKKRV 136
>gi|407927427|gb|EKG20321.1| Replication fork protection component Swi3 [Macrophomina phaseolina
MS6]
Length = 307
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 65/141 (46%), Gaps = 7/141 (4%)
Query: 63 SAIGVKEKPKKLPRSRP--KLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIG 120
S +G+ E+ + +P KL LLS G+ + R K++G+GHE D+G+L+
Sbjct: 54 SGLGIDEEVTVANKRQPIAKLDEARLLSPAGIPRLRRISKERLKFKGKGHEFKDVGNLLK 113
Query: 121 LYSEWHSHLLPYYSFDHFVSKVEQVAASRRVKMCIRDLRDRVANGGDPTKLHEAAVEH-D 179
+Y W L P F ++ +E++ +R+++ +R N G P + + +
Sbjct: 114 MYQLWLDDLYPRAKFGDGLAIIEKLGHKKRMQI----MRKEWINEGKPRPSEDVETDFPE 169
Query: 180 GPVDEQAPAEAMSSERQPHQQ 200
G D Q P + HQ+
Sbjct: 170 GGQDAQDPTAGTTRADDEHQE 190
>gi|154305225|ref|XP_001553015.1| hypothetical protein BC1G_08907 [Botryotinia fuckeliana B05.10]
Length = 337
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 76/169 (44%), Gaps = 14/169 (8%)
Query: 65 IGVKEKPKKLPRSRPKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSE 124
I V +KP+ +PR KL LLS G+ + + K++G+GHE SD L+ Y
Sbjct: 73 IEVTKKPR-VPRV--KLDEHKLLSSAGIPKLRKKAADHLKFKGKGHEYSDAARLLAFYQL 129
Query: 125 WHSHLLPYYSFDHFVSKVEQVAASRRVKMCIRDLRDRVANGGDPTKLHEAAV--EHDGPV 182
W L P F ++ VE++ + ++ D + G + +HE ++ E + P
Sbjct: 130 WLDDLFPKAKFADALTMVEKLGHKKMIQSARMDW---INEGKPKSSVHEDSLFDEPELPP 186
Query: 183 DEQAPAEAMSSERQP-----HQQDPASNVHAAD-DFNDLFNKVYRTATE 225
E E +S P + P + V D DFND+++ + A +
Sbjct: 187 REDNEREKTASRIAPIFESAASERPRTPVPNQDPDFNDMYDATPKNARQ 235
>gi|195437809|ref|XP_002066832.1| GK24687 [Drosophila willistoni]
gi|194162917|gb|EDW77818.1| GK24687 [Drosophila willistoni]
Length = 302
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 56/126 (44%), Gaps = 11/126 (8%)
Query: 69 EKPKK--LPRSRPKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWH 126
E PKK + RP+LT D L GL + +F + K++G+G E DL ++ W
Sbjct: 55 EPPKKRAVRNPRPRLTVDTLRGPRGLHSIEDYF-KDMKFKGKGREKDDLDEVLRRLQHWG 113
Query: 127 SHLLPYYSFDHFVSKVE--------QVAASRRVKMCIRDLRDRVANGGDPTKLHEAAVEH 178
+ P Y+FD ++ +E QV SR + D R A D + A +
Sbjct: 114 HRMYPNYTFDDILNNIERLGKKKPLQVHMSRYRLGQLEDFRVPEAQINDDDQDELNAAQM 173
Query: 179 DGPVDE 184
D P DE
Sbjct: 174 DEPFDE 179
>gi|340975522|gb|EGS22637.1| hypothetical protein CTHT_0011090 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 473
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 5/80 (6%)
Query: 80 KLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHLLPYYSFDHFV 139
KL LLS+ G+ + + PR K++G+GHE SD L+ Y EW L P +F +
Sbjct: 69 KLDDQRLLSEKGIPKLRKMAPR-LKFKGKGHEFSDTARLLSFYQEWLDDLFPKATFLDAL 127
Query: 140 SKVEQVAASRRVKMCIRDLR 159
+ VE+ K +R+ R
Sbjct: 128 AMVEKAGH----KTTVRNAR 143
>gi|260310453|gb|ACX36509.1| SD26634p [Drosophila melanogaster]
Length = 320
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 64/131 (48%), Gaps = 6/131 (4%)
Query: 34 NSNFPSNNTASGGGGGGSGV----GDGGVSV-SKSAIGVKEKPKKLPRSRPKLTPDLLLS 88
N N P++ G G + D GV S+ A V+ K + + RP+LT + L
Sbjct: 28 NDNIPTDPDQLPSDGEGEKLFADDEDNGVEPGSQDAQIVEPKKRAVRNPRPRLTVETLRG 87
Query: 89 DDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHLLPYYSFDHFVSKVEQVAAS 148
G+ + +F + K++G+G+E +DL ++ W + P Y+FD ++ +E++
Sbjct: 88 PRGIQTIEDYF-KDIKFKGKGYEKTDLDEVLRRLQHWGHRMYPTYTFDDVLNNIERLGKK 146
Query: 149 RRVKMCIRDLR 159
+ +++ + R
Sbjct: 147 KPLQVHMARYR 157
>gi|47213259|emb|CAF92920.1| unnamed protein product [Tetraodon nigroviridis]
Length = 199
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 52/122 (42%), Gaps = 23/122 (18%)
Query: 60 VSKSAIGVKEKPKKLPRSRPKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEV------- 112
VSK A K K + R +PKL L S+ GL LR +++GRGHEV
Sbjct: 59 VSKLADVPAAKRKGVKRPQPKLDSQRLTSERGLP-ALRTLFENVRFKGRGHEVRLPHRRA 117
Query: 113 ---------------SDLGHLIGLYSEWHSHLLPYYSFDHFVSKVEQVAASRRVKMCIRD 157
DL L+ W L P F+ FV KVE++ + V+ C++
Sbjct: 118 VGSVPRHHSGVCLQAEDLQLLMQKMENWAHRLFPKLQFEEFVDKVERLGKKKEVQTCLKR 177
Query: 158 LR 159
+R
Sbjct: 178 IR 179
>gi|24585015|ref|NP_724124.1| CG10336, isoform A [Drosophila melanogaster]
gi|221475959|ref|NP_609895.2| CG10336, isoform C [Drosophila melanogaster]
gi|251757348|sp|Q8INX3.2|TIPIN_DROME RecName: Full=Protein TIPIN homolog; AltName: Full=CSM3 homolog
gi|7298470|gb|AAF53690.1| CG10336, isoform A [Drosophila melanogaster]
gi|21392236|gb|AAM48472.1| SD08134p [Drosophila melanogaster]
gi|220902068|gb|AAN11011.2| CG10336, isoform C [Drosophila melanogaster]
gi|220950666|gb|ACL87876.1| CG10336-PA [synthetic construct]
gi|220959370|gb|ACL92228.1| CG10336-PA [synthetic construct]
Length = 307
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 63/127 (49%), Gaps = 6/127 (4%)
Query: 34 NSNFPSNNTASGGGGGGSGV----GDGGVSV-SKSAIGVKEKPKKLPRSRPKLTPDLLLS 88
N N P++ G G + D GV S+ A V+ K + + RP+LT + L
Sbjct: 15 NDNIPTDPDQLPSDGEGEKLFADDEDNGVEPGSQDAQIVEPKKRAVRNPRPRLTVETLRG 74
Query: 89 DDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHLLPYYSFDHFVSKVEQVAAS 148
G+ + +F + K++G+G+E +DL ++ W + P Y+FD ++ +E++
Sbjct: 75 PRGIQTIEDYF-KDIKFKGKGYEKTDLDEVLRRLQHWGHRMYPTYTFDDVLNNIERLGKK 133
Query: 149 RRVKMCI 155
+ +++ +
Sbjct: 134 KPLQVHM 140
>gi|357624101|gb|EHJ74999.1| hypothetical protein KGM_03301 [Danaus plexippus]
Length = 204
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 49/104 (47%), Gaps = 2/104 (1%)
Query: 81 LTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHLLPYYSFDHFVS 140
L P L G+ + HF + FK++G+GHE DL ++ W L P + F+ +
Sbjct: 73 LNPARLTGPRGIHVIPEHF-KDFKFKGKGHEKEDLDLILKKLEHWAYRLYPKFQFEDCLK 131
Query: 141 KVEQVAASRRVKMCIRDLRDRVANGGDPTKLHEAAVEHDGPVDE 184
K+E + R V + + +R +P + E + + D P DE
Sbjct: 132 KIETLGKKRPVMVNLHKIRSDQFTTEEPI-VQEDSTDDDEPQDE 174
>gi|347826771|emb|CCD42468.1| hypothetical protein [Botryotinia fuckeliana]
Length = 337
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 76/169 (44%), Gaps = 14/169 (8%)
Query: 65 IGVKEKPKKLPRSRPKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSE 124
I V +KP+ +PR KL LLS G+ + + K++G+GHE SD L+ Y
Sbjct: 73 IEVTKKPR-VPRV--KLDEHKLLSSAGIPKLRKKAADHLKFKGKGHEYSDAARLLAFYQL 129
Query: 125 WHSHLLPYYSFDHFVSKVEQVAASRRVKMCIRDLRDRVANGGDPTKLHEAAV--EHDGPV 182
W L P F ++ VE++ + ++ D + G + +HE ++ E + P
Sbjct: 130 WLDDLFPKAKFADALTMVEKLGHKKMIQSARMDW---INEGKPKSSVHEDSLFDEPELPP 186
Query: 183 DEQAPAEAMSSERQP-----HQQDPASNVHAAD-DFNDLFNKVYRTATE 225
E E +S P + P + V D DFND+++ + A +
Sbjct: 187 REDNEREKTASRIAPIFESAASERPRTPVPNQDTDFNDMYDATPKNARQ 235
>gi|146323673|ref|XP_001481554.1| replication fork protection component Swi3 [Aspergillus fumigatus
Af293]
gi|158513544|sp|A4DA84.1|CSM3_ASPFU RecName: Full=Chromosome segregation in meiosis protein 3
gi|129555336|gb|EBA27200.1| replication fork protection component Swi3, putative [Aspergillus
fumigatus Af293]
gi|159122103|gb|EDP47225.1| Swi3-like protein [Aspergillus fumigatus A1163]
Length = 270
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 61/127 (48%), Gaps = 9/127 (7%)
Query: 65 IGVKEKPKKLPRSRP--KLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLY 122
+G+ E+ K + +P KL LLS G+ + R + +++G+GHE SD L+ Y
Sbjct: 57 LGLDEEVKVTKKRQPVAKLDESRLLSQPGIPKLRRTAKKKLRFKGKGHEFSDAARLLNFY 116
Query: 123 SEWHSHLLPYYSFDHFVSKVEQVAASRRVKMCIRDL------RDRVANGGDPTKLHEAA- 175
W L P F ++ +E++ S+R++ ++ +D N D K E++
Sbjct: 117 QLWLDDLFPRAKFADGLAIIERLGHSKRLQAMRKEWIDEEKPKDASENHNDVLKASESSG 176
Query: 176 VEHDGPV 182
+ D PV
Sbjct: 177 SQSDDPV 183
>gi|389748935|gb|EIM90112.1| Swi3-domain-containing protein [Stereum hirsutum FP-91666 SS1]
Length = 467
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 46/85 (54%), Gaps = 4/85 (4%)
Query: 86 LLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHLLPYYSFDHFVSKVEQV 145
LL DG +++ + +K RG+GHE +DL ++ +Y W + + P F V +VE++
Sbjct: 171 LLGKDGFPALIKTT-KDWKPRGKGHEAADLNQVLQIYQFWTARMYPKTRFRDTVDRVERL 229
Query: 146 AASRRVKMCIRDLRDR---VANGGD 167
S+R+ + + RD + NG D
Sbjct: 230 CHSKRMHVALSVWRDESKGLINGED 254
>gi|296085963|emb|CBI31404.3| unnamed protein product [Vitis vinifera]
Length = 294
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 6 AAPTGCFKCGRPGHWSRDCPSS-SSSAPSNSNFPSNNTASGGGG 48
A CFKCGRPGHW+RDCPSS + FPS + SGG G
Sbjct: 130 AGQDDCFKCGRPGHWARDCPSSGGGRGRGGAPFPSRSRFSGGRG 173
>gi|303320909|ref|XP_003070449.1| hypothetical protein CPC735_061770 [Coccidioides posadasii C735
delta SOWgp]
gi|240110145|gb|EER28304.1| hypothetical protein CPC735_061770 [Coccidioides posadasii C735
delta SOWgp]
Length = 338
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 57/116 (49%), Gaps = 2/116 (1%)
Query: 48 GGGSGVGDGGV-SVSKSAIGVKEKPKKLPRSRP-KLTPDLLLSDDGLGFVLRHFPRAFKY 105
G SG G G + + +G++E R+ P KL + LLS G+ + + K+
Sbjct: 31 GRASGTGTGSTENKNDDLVGLEEIKITRKRAPPVKLDENRLLSQAGIPKLRKSAKTKLKF 90
Query: 106 RGRGHEVSDLGHLIGLYSEWHSHLLPYYSFDHFVSKVEQVAASRRVKMCIRDLRDR 161
+G+ HE SD+ L+ Y W L P F +S +E++ ++R+++ ++ D
Sbjct: 91 KGKRHEFSDVARLLNFYQLWLDDLYPRAKFADGLSIIEKLGHTKRMQVMRKEWIDE 146
>gi|225448932|ref|XP_002267178.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G [Vitis
vinifera]
Length = 278
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 6 AAPTGCFKCGRPGHWSRDCPSS-SSSAPSNSNFPSNNTASGGGG 48
A CFKCGRPGHW+RDCPSS + FPS + SGG G
Sbjct: 114 AGQDDCFKCGRPGHWARDCPSSGGGRGRGGAPFPSRSRFSGGRG 157
>gi|119486676|ref|XP_001262324.1| replication fork protection component Swi3, putative [Neosartorya
fischeri NRRL 181]
gi|158512649|sp|A1D9E6.1|CSM3_NEOFI RecName: Full=Chromosome segregation in meiosis protein 3
gi|119410481|gb|EAW20427.1| replication fork protection component Swi3, putative [Neosartorya
fischeri NRRL 181]
Length = 270
Score = 50.1 bits (118), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 50/98 (51%), Gaps = 2/98 (2%)
Query: 65 IGVKEKPKKLPRSRP--KLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLY 122
+G+ E+ K + +P KL LLS G+ + R + +++G+GHE SD L+ Y
Sbjct: 57 LGLDEEVKVTKKRQPVAKLDESRLLSQPGIPKLRRTAKKKLRFKGKGHEFSDAARLLNFY 116
Query: 123 SEWHSHLLPYYSFDHFVSKVEQVAASRRVKMCIRDLRD 160
W L P F ++ +E++ S+R++ ++ D
Sbjct: 117 QLWLDDLFPRAKFADGLAIIERLGHSKRLQAMRKEWID 154
>gi|321463280|gb|EFX74297.1| hypothetical protein DAPPUDRAFT_307343 [Daphnia pulex]
Length = 266
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 57/115 (49%), Gaps = 4/115 (3%)
Query: 70 KPKKLPRSRP-KLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSH 128
K +KL RS+ KL P+ + G+ V+++F + K +G+GHE SDL ++ W
Sbjct: 47 KTRKLVRSQQLKLDPNRVCGPRGITAVIQNF-KNVKLQGKGHEKSDLETVLSQMEHWAHR 105
Query: 129 LLPYYSFDHFVSKVEQVAASRRVKMCIRDLRDRVANGGDPTKLHEAAVEHDGPVD 183
L P FD + V ++ ++ V++ ++ R R+ ++ E V D D
Sbjct: 106 LFPKLPFDDCIESVAKLGNNKSVQVYMK--RFRMGMLDTEQEIEETLVNTDAQFD 158
>gi|348671698|gb|EGZ11518.1| hypothetical protein PHYSODRAFT_317087 [Phytophthora sojae]
Length = 168
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 52/113 (46%), Gaps = 7/113 (6%)
Query: 49 GGSGVGDGGVSVSKSAIGVKEKPKKLPRSRPKLTPDLLLSDDGLGFVLRHFPRAFKYRGR 108
G VGD + + +++ K R R L L+S +GL V R FP
Sbjct: 30 GSQDVGDDLGTAAAASVPAK-------RRRNLLRESHLVSAEGLKKVHRTFPYQVSADVS 82
Query: 109 GHEVSDLGHLIGLYSEWHSHLLPYYSFDHFVSKVEQVAASRRVKMCIRDLRDR 161
G E L L+ +Y +W L P +F+ FV + E + S +V+ + DLR++
Sbjct: 83 GREAQALASLVKMYKQWAFDLYPGLNFEDFVERAEALGKSHQVQGLMADLREK 135
>gi|147841866|emb|CAN66927.1| hypothetical protein VITISV_011831 [Vitis vinifera]
Length = 240
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 6 AAPTGCFKCGRPGHWSRDCPSS-SSSAPSNSNFPSNNTASGGGG 48
A CFKCGRPGHW+RDCPSS + FPS + SGG G
Sbjct: 76 AGQDDCFKCGRPGHWARDCPSSGGGRGRGGAPFPSRSRFSGGRG 119
>gi|355757386|gb|EHH60911.1| hypothetical protein EGM_18807, partial [Macaca fascicularis]
Length = 287
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 3/80 (3%)
Query: 80 KLTPDLLLSDDGLGFVLRH-FPRAFKYRGRGHEVSDLGHLIGLYSEWHSHLLPYYSFDHF 138
KL L+S+ GL LRH F RA K++G+ HE DL I W P F+ F
Sbjct: 61 KLDAHRLISERGLP-ALRHVFDRA-KFKGKSHEAEDLKMPIRHMEHWAHRQFPKLQFEDF 118
Query: 139 VSKVEQVAASRRVKMCIRDL 158
+ +VE + + ++ C+ DL
Sbjct: 119 IDRVEYLRNKKEIQTCLNDL 138
>gi|308803446|ref|XP_003079036.1| unnamed protein product [Ostreococcus tauri]
gi|116057490|emb|CAL51917.1| unnamed protein product [Ostreococcus tauri]
Length = 329
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/156 (19%), Positives = 60/156 (38%), Gaps = 30/156 (19%)
Query: 11 CFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASGGGGGGSGVGDGGVSVSKSAIGVKEK 70
C +CG PGHW++DC + + A + + + +
Sbjct: 6 CARCGEPGHWAKDCTAPRARANERDGMETI-----------------ADGTTTTTTGPDG 48
Query: 71 PKKLPRSRPKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHLL 130
++ R+ + LL ++ +G GHE +D L+ +Y EW +
Sbjct: 49 DERRERTEVSIHEHLLGPNEA-------------SKGDGHEAADAAALLPMYKEWPVKMY 95
Query: 131 PYYSFDHFVSKVEQVAASRRVKMCIRDLRDRVANGG 166
PY + + +V ++ + V+ IR+ +R GG
Sbjct: 96 PYAPAEETLERVSKLGKDKAVRAAIREFHERDFGGG 131
>gi|389647409|ref|XP_003721336.1| chromosome segregation in meiosis protein 3 [Magnaporthe oryzae
70-15]
gi|158514089|sp|A4RCW0.1|CSM3_MAGO7 RecName: Full=Chromosome segregation in meiosis protein 3
gi|86196123|gb|EAQ70761.1| hypothetical protein MGCH7_ch7g168 [Magnaporthe oryzae 70-15]
gi|351638728|gb|EHA46593.1| chromosome segregation in meiosis protein 3 [Magnaporthe oryzae
70-15]
gi|440463785|gb|ELQ33329.1| Swi3 domain-containing protein [Magnaporthe oryzae Y34]
gi|440490361|gb|ELQ69924.1| Swi3 domain-containing protein [Magnaporthe oryzae P131]
Length = 357
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 52/116 (44%), Gaps = 8/116 (6%)
Query: 30 SAPSNSNFPSNNTASGGGGGGSGVGDGGVSVSKSAIGVKEKPKKLPRSRPKLTPDLLLSD 89
++P+NS N + GG DGG+ + + K ++PR KL LLSD
Sbjct: 29 ASPTNS---PNQSPKAKGGAKRSEPDGGLGIDEEVSVAKRA--RVPRV--KLDETRLLSD 81
Query: 90 DGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHLLPYYSFDHFVSKVEQV 145
G+ LR + +G+GHE SD L+ Y W L P F ++ VE+
Sbjct: 82 KGIP-ALRKRAGTLRLKGKGHEFSDAARLLSFYQLWLDDLFPKAKFLDALAMVEKA 136
>gi|320033051|gb|EFW15000.1| chromosome segregation in meiosis protein 3 [Coccidioides posadasii
str. Silveira]
Length = 338
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 58/118 (49%), Gaps = 6/118 (5%)
Query: 48 GGGSGVGDGGV-SVSKSAIGVKEKPKKLPRSRP---KLTPDLLLSDDGLGFVLRHFPRAF 103
G SG G G + + +G++E K+ R R KL + LLS G+ + +
Sbjct: 31 GRASGTGTGSTENKNDDLVGLEEI--KITRKRAPTVKLDENRLLSQAGIPKLRKSAKTKL 88
Query: 104 KYRGRGHEVSDLGHLIGLYSEWHSHLLPYYSFDHFVSKVEQVAASRRVKMCIRDLRDR 161
K++G+ HE SD+ L+ Y W L P F +S +E++ ++R+++ ++ D
Sbjct: 89 KFKGKRHEFSDVARLLNFYQLWLDDLYPRAKFADGLSIIEKLGHTKRMQVMRKEWIDE 146
>gi|355704828|gb|EHH30753.1| hypothetical protein EGK_20528, partial [Macaca mulatta]
Length = 285
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 3/80 (3%)
Query: 80 KLTPDLLLSDDGLGFVLRH-FPRAFKYRGRGHEVSDLGHLIGLYSEWHSHLLPYYSFDHF 138
KL L+S+ GL LRH F RA K++G+ HE DL I W P F+ F
Sbjct: 61 KLDAHRLISERGLP-ALRHVFDRA-KFKGKSHEAEDLKMPIRHMEHWAHRQFPKLQFEDF 118
Query: 139 VSKVEQVAASRRVKMCIRDL 158
+ +VE + + ++ C+ DL
Sbjct: 119 IDRVEYLRNKKEIQTCLNDL 138
>gi|195484206|ref|XP_002090595.1| GE13199 [Drosophila yakuba]
gi|194176696|gb|EDW90307.1| GE13199 [Drosophila yakuba]
Length = 320
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 62/127 (48%), Gaps = 6/127 (4%)
Query: 34 NSNFPSNNTASGGGGGGSGV-----GDGGVSVSKSAIGVKEKPKKLPRSRPKLTPDLLLS 88
N N P++ G G + +GG S+ A V+ K + + RP+LT + L
Sbjct: 28 NDNLPTDPDQLPSDGEGEKLFADDEENGGEPGSQDAQTVEPKKRAVRNPRPRLTVETLQG 87
Query: 89 DDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHLLPYYSFDHFVSKVEQVAAS 148
G+ + +F + K++G+G+E +DL ++ W + Y+FD ++ +E++
Sbjct: 88 PRGIQTLEDYF-KDIKFKGKGYEKTDLDEVLRRLQHWGHRMYSTYTFDDVLNNIERLGKK 146
Query: 149 RRVKMCI 155
+ +++ +
Sbjct: 147 KPLQVHM 153
>gi|358370656|dbj|GAA87267.1| chromosome segregation in meiosis protein 3 [Aspergillus kawachii
IFO 4308]
Length = 257
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 50/107 (46%), Gaps = 2/107 (1%)
Query: 57 GVSVSKSAIGVKEKPK--KLPRSRPKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSD 114
G ++ +G+ EK K RS KL LLS G+ + K++G+GHE SD
Sbjct: 28 GGPIAAPMLGLDEKVTITKQRRSTVKLDEGRLLSQAGIPKLRSTAKSKLKFKGKGHEFSD 87
Query: 115 LGHLIGLYSEWHSHLLPYYSFDHFVSKVEQVAASRRVKMCIRDLRDR 161
L+ Y W L P F ++ +E++ S+R++ R+ D
Sbjct: 88 AARLLNFYQLWLDDLFPRAKFADGLAIIEKLGHSKRLQTMRREWIDE 134
>gi|406697721|gb|EKD00976.1| hypothetical protein A1Q2_04743 [Trichosporon asahii var. asahii
CBS 8904]
Length = 327
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 48/90 (53%), Gaps = 1/90 (1%)
Query: 71 PKKLPRSRPKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHLL 130
P K R K+ + L++ GL +++ +++K +G+G E DLG L+ +Y+ W +
Sbjct: 135 PAKKRRKMAKVDHERLMAPAGLPRLMK-IAKSWKVKGKGREKEDLGLLVDMYTVWAHGMF 193
Query: 131 PYYSFDHFVSKVEQVAASRRVKMCIRDLRD 160
P F + + +VE V + R+ I ++D
Sbjct: 194 PKGDFKYTIGRVEAVCRTNRMINSIAGMKD 223
>gi|213406984|ref|XP_002174263.1| Swi1-interacting protein swi3 [Schizosaccharomyces japonicus
yFS275]
gi|212002310|gb|EEB07970.1| Swi1-interacting protein swi3 [Schizosaccharomyces japonicus
yFS275]
Length = 192
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
Query: 72 KKLPRSRPKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHLLP 131
KK + R KL D LLS++G+ + + P + +++G+ HE D+ L+ Y W + P
Sbjct: 48 KKERKPRIKLDEDYLLSENGIPRLRKTAP-SLRFKGKNHEAQDMKRLLAFYQLWAHEMFP 106
Query: 132 YYSFDHFVSKVEQVAASRRVKMCIRDLRDRVAN 164
FD + ++ + R +K+ R + +N
Sbjct: 107 KAKFDDTIIGLQSLGKRRMMKIHRRHWIEEYSN 139
>gi|326507358|dbj|BAK03072.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 293
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 25/44 (56%)
Query: 6 AAPTGCFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASGGGGG 49
AA CFKCGRPGHW+R+CP S P + PS GG G
Sbjct: 118 AASDDCFKCGRPGHWARECPYSVGGRPGRYSPPSRYVNGAGGRG 161
>gi|408395131|gb|EKJ74318.1| hypothetical protein FPSE_05615 [Fusarium pseudograminearum CS3096]
Length = 262
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 44/95 (46%), Gaps = 4/95 (4%)
Query: 63 SAIGVKEKPKKLPRSRP---KLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLI 119
S +G+ E+ R+R KL D LL G+ LR R K +G+GHE SD L+
Sbjct: 42 SGLGIDEEVDVKKRARAPNVKLDEDRLLGPKGIP-KLRQRARDLKIKGKGHEFSDASRLL 100
Query: 120 GLYSEWHSHLLPYYSFDHFVSKVEQVAASRRVKMC 154
Y W L P F +S VE+ +RV +
Sbjct: 101 SFYQLWLDDLFPKAKFLDALSMVEKAGHKKRVMIA 135
>gi|336268632|ref|XP_003349080.1| CSM3 protein [Sordaria macrospora k-hell]
gi|380093708|emb|CCC08672.1| putative CSM3 protein [Sordaria macrospora k-hell]
Length = 370
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Query: 72 KKLPRSRPKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHLLP 131
KK R KL LLSD G+ + + P+ K +G+GHE SD L+ Y EW L P
Sbjct: 58 KKARVPRVKLDDARLLSDKGIPKLRKTAPK-LKLKGKGHEFSDAARLLSFYQEWLDDLFP 116
Query: 132 YYSFDHFVSKVEQV 145
+F ++ E+
Sbjct: 117 KATFVDALAMCEKA 130
>gi|401889017|gb|EJT52960.1| hypothetical protein A1Q1_00707 [Trichosporon asahii var. asahii
CBS 2479]
Length = 298
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 48/90 (53%), Gaps = 1/90 (1%)
Query: 71 PKKLPRSRPKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHLL 130
P K R K+ + L++ GL +++ +++K +G+G E DLG L+ +Y+ W +
Sbjct: 106 PAKKRRKMAKVDHERLMAPAGLPRLMK-IAKSWKVKGKGREKEDLGLLVDMYTVWAHGMF 164
Query: 131 PYYSFDHFVSKVEQVAASRRVKMCIRDLRD 160
P F + + +VE V + R+ I ++D
Sbjct: 165 PKGDFKYTIGRVEAVCRTNRMINSIAGMKD 194
>gi|195344878|ref|XP_002039003.1| GM17286 [Drosophila sechellia]
gi|194134133|gb|EDW55649.1| GM17286 [Drosophila sechellia]
Length = 320
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
Query: 67 VKEKPKKLPRSRPKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWH 126
V+ K + + RP+LT + L G+ + +F + K++G+G+E +DL ++ W
Sbjct: 66 VEPKKRAVRNPRPRLTVETLRGPRGIQTIEDYF-KDIKFKGKGYEKTDLDEVLRRLQHWG 124
Query: 127 SHLLPYYSFDHFVSKVEQVAASRRVKMCI 155
+ P Y+FD ++ +E++ + +++ +
Sbjct: 125 HRMYPTYTFDDVLNNIERLGKKKPLQVHM 153
>gi|156040954|ref|XP_001587463.1| hypothetical protein SS1G_11455 [Sclerotinia sclerotiorum 1980]
gi|154695839|gb|EDN95577.1| hypothetical protein SS1G_11455 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 343
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 54/128 (42%), Gaps = 3/128 (2%)
Query: 33 SNSNFPSNNTASGGGGGGSGVGDGGVSVSKSAIGVKEKPK--KLPR-SRPKLTPDLLLSD 89
+N F N G G + + +G+ E+ + K PR R KL LLS
Sbjct: 35 TNDPFSENYVVPGSKDKEKGKESASNKKTGAGLGIDEEIEVTKKPRVPRVKLDEHKLLSS 94
Query: 90 DGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHLLPYYSFDHFVSKVEQVAASR 149
G+ + + K++G+GHE SD L+ Y W L P F ++ VE++ +
Sbjct: 95 AGIPKLRKKAADHLKFKGKGHEYSDAARLLAFYQLWLDDLFPKAKFSDALAMVEKLGHKK 154
Query: 150 RVKMCIRD 157
++ D
Sbjct: 155 MIQSARMD 162
>gi|170064091|ref|XP_001867381.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167881522|gb|EDS44905.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 274
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 50/100 (50%), Gaps = 3/100 (3%)
Query: 54 GDGGVSVSKSAIGVKEKPKKLPRSRPK--LTPDLLLSDDGLGFVLRHFPRAFKYRGRGHE 111
GDGG + + + VK +PK+ P+ L L G+ + +F + FK+RG+G E
Sbjct: 34 GDGGDNEAGPSKPVKIEPKQRTVRNPRNLLNVQRLCGPRGIADLENYF-KGFKFRGKGRE 92
Query: 112 VSDLGHLIGLYSEWHSHLLPYYSFDHFVSKVEQVAASRRV 151
DL ++ W + P Y+ D +S +E++ +++
Sbjct: 93 ADDLNAIMKRMQHWAHRMYPKYNLDDCLSTIERLGKKKQM 132
>gi|293335932|ref|NP_001168160.1| uncharacterized protein LOC100381912 [Zea mays]
gi|223946377|gb|ACN27272.1| unknown [Zea mays]
gi|414872130|tpg|DAA50687.1| TPA: hypothetical protein ZEAMMB73_997132 [Zea mays]
Length = 297
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 29/46 (63%), Gaps = 8/46 (17%)
Query: 11 CFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASGGGGGGSGVGDG 56
CF+CGRPGHW RDCPS++ + FPS + GGSGVG G
Sbjct: 116 CFECGRPGHWVRDCPSAAGG--RSGRFPSKFS------GGSGVGRG 153
>gi|374106250|gb|AEY95160.1| FABR100Wp [Ashbya gossypii FDAG1]
Length = 240
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 62/137 (45%), Gaps = 11/137 (8%)
Query: 38 PSNNTASGGGGGGSGVGDGGVS-VSKSAIGVKEKPKKLPRSRPKLTPDLLLSDDGLGFVL 96
P + A+G G GGS ++ + SAI V++ R+ KL + L+S GL ++L
Sbjct: 6 PLEDEAAGTGLGGSPADPATLTEIDPSAIQVRKT-----RTVVKLDCERLVSKKGLPYLL 60
Query: 97 RHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHLLPYYSFDHFVSKVEQVAASRRV----- 151
++ P+ + R +L H++ Y W L P F FV+ +++ + R
Sbjct: 61 KNAPKHARISKRRDTYGNLCHVLQFYQLWAHELYPKAKFKDFVALCDRLGKTDRQLRAYR 120
Query: 152 KMCIRDLRDRVANGGDP 168
IR+ A G DP
Sbjct: 121 MQLIREELGLAAEGLDP 137
>gi|430814022|emb|CCJ28692.1| unnamed protein product, partial [Pneumocystis jirovecii]
Length = 2048
Score = 47.4 bits (111), Expect = 0.005, Method: Composition-based stats.
Identities = 26/95 (27%), Positives = 49/95 (51%), Gaps = 2/95 (2%)
Query: 61 SKSAIGVKEKPK-KLPRSRPKLTPD-LLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHL 118
S S +G+ E+ + +S KL + LLS+ GL ++ P+ + +G+G+E DL L
Sbjct: 72 SSSDLGIDEEVSIRTRKSVAKLDDEKRLLSEKGLVQIVHQAPQRMRLKGKGYEFEDLRSL 131
Query: 119 IGLYSEWHSHLLPYYSFDHFVSKVEQVAASRRVKM 153
+ Y W L P F + +++ S+R+++
Sbjct: 132 LSYYQIWAHELFPKARFREVIRMIQKCGRSKRIRI 166
>gi|50287615|ref|XP_446237.1| hypothetical protein [Candida glabrata CBS 138]
gi|74610296|sp|Q6FU57.1|CSM3_CANGA RecName: Full=Chromosome segregation in meiosis protein 3
gi|49525544|emb|CAG59161.1| unnamed protein product [Candida glabrata]
Length = 309
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 34/67 (50%)
Query: 73 KLPRSRPKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHLLPY 132
K+ R + KLT + LLS +GL +V++H P+ + +L H+I Y W L P
Sbjct: 46 KVRRPQVKLTAERLLSPNGLPYVMKHAPKRVRISKSRSTYKNLEHIIQFYQLWAHELFPK 105
Query: 133 YSFDHFV 139
F FV
Sbjct: 106 AKFKDFV 112
>gi|85118706|ref|XP_965489.1| hypothetical protein NCU01858 [Neurospora crassa OR74A]
gi|74618907|sp|Q7SHE8.1|CSM3_NEUCR RecName: Full=Chromosome segregation in meiosis protein 3
gi|28927299|gb|EAA36253.1| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 409
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 43/97 (44%), Gaps = 5/97 (5%)
Query: 72 KKLPRSRPKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHLLP 131
KK R KL LLSD G+ LR K +G+GHE SD L+ Y EW L P
Sbjct: 61 KKARVPRVKLDDARLLSDKGIP-KLRKTASKLKLKGKGHEFSDAARLLSFYQEWLDDLFP 119
Query: 132 YYSFDHFVSKVEQVAASRRVKMCIRDLRDRVANGGDP 168
+F ++ E+ K +R+ R + G P
Sbjct: 120 KATFVDALAMCEKAGH----KTTLRNARLKWIAEGKP 152
>gi|326435162|gb|EGD80732.1| hypothetical protein PTSG_01322 [Salpingoeca sp. ATCC 50818]
Length = 534
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 66/141 (46%), Gaps = 8/141 (5%)
Query: 24 CPSSSSSAPSNSNFPSNNTASGGGGGGSGVGDGGVSVSKSAIGVKEKPKKLPRS---RPK 80
P++S+ + ++T G GGGS VS + A E P K ++ R
Sbjct: 74 APNTSTGVNHVEDDERDHTDDEGHGGGSQAN---VSQAPEATQEDETPTKTKKAGSKRMS 130
Query: 81 LTPDLLLS-DDGLGFVLRHFPRAFKYRGR-GHEVSDLGHLIGLYSEWHSHLLPYYSFDHF 138
L + LL+ ++G+ ++L+ F + ++ + G E +L L+ Y W L+P S +
Sbjct: 131 LDVERLLNPENGVPYMLKTFSKHVRFSNKPGMETRNLRLLMDHYDAWMDQLMPKMSLSNV 190
Query: 139 VSKVEQVAASRRVKMCIRDLR 159
V +E++ V+ + DLR
Sbjct: 191 VDTIERLGHKAAVRTYLTDLR 211
>gi|346319041|gb|EGX88643.1| replication fork protection component Swi3 [Cordyceps militaris
CM01]
Length = 320
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 6/104 (5%)
Query: 53 VGDGGVSVSKSAIGVKEKPKKLPRSRPKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEV 112
D G+ + + + V+ KP+ KL + LLS+ GL LR K +G+GHE
Sbjct: 46 TDDAGLGIDEE-VDVQRKPRA---PAVKLDENRLLSEAGLP-RLRKRSNRLKIKGKGHEF 100
Query: 113 SDLGHLIGLYSEWHSHLLPYYSFDHFVSKVEQVAASRRVKMCIR 156
SD+ L+ Y W L P F ++ VE+ S+R+ M R
Sbjct: 101 SDMARLLSFYQLWLDDLYPKARFLDALAMVEKAGHSKRM-MTAR 143
>gi|356575516|ref|XP_003555886.1| PREDICTED: uncharacterized protein LOC100809519 [Glycine max]
Length = 279
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 11 CFKCGRPGHWSRDCP-SSSSSAPSNSNFPSNNTASGGGGGGSGVG 54
CFKCGRPGHW+RDCP + S+FPS GG G +G
Sbjct: 119 CFKCGRPGHWARDCPLAGGGRGRGGSSFPSRPRFGAAGGNGDRLG 163
>gi|255645278|gb|ACU23136.1| unknown [Glycine max]
Length = 279
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 11 CFKCGRPGHWSRDCP-SSSSSAPSNSNFPSNNTASGGGGGGSGVG 54
CFKCGRPGHW+RDCP + S+FPS GG G +G
Sbjct: 119 CFKCGRPGHWARDCPLAGGGRGRGGSSFPSRPRFGAAGGNGDRLG 163
>gi|336464995|gb|EGO53235.1| hypothetical protein NEUTE1DRAFT_73667 [Neurospora tetrasperma FGSC
2508]
Length = 409
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Query: 72 KKLPRSRPKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHLLP 131
KK R KL LLSD G+ LR K +G+GHE SD L+ Y EW L P
Sbjct: 61 KKARVPRVKLDDARLLSDKGIP-KLRKTSSKLKLKGKGHEFSDAARLLSFYQEWLDDLFP 119
Query: 132 YYSFDHFVSKVEQV 145
+F ++ E+
Sbjct: 120 KATFVDALAMCEKA 133
>gi|401842207|gb|EJT44460.1| CSM3-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 319
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 64/142 (45%), Gaps = 15/142 (10%)
Query: 47 GGGGSGVGDGGVSVSKSAIGVKEKPKKLPRSRPKLTPDLLLSDDGLGFVLRHFPRAFKYR 106
G S V D ++ + + K +P+ KLT + LLSD GL +VL++ + +
Sbjct: 26 NGLDSSVIDPTIADPTAIVTRKRRPQ------VKLTAEKLLSDKGLPYVLKNAHKRIRIS 79
Query: 107 GRGHEVSDLGHLIGLYSEWHSHLLPYYSFDHF------VSKVEQVAASRRVKMCIRDLRD 160
R + ++L ++I Y W L P F F V K + V RV + RD D
Sbjct: 80 SRKNSYANLSNIIQFYQLWAHELFPKAKFKDFMKICQTVGKTDPVLREYRVSL-FRDEMD 138
Query: 161 RVANGGDPTKLHEAAVEHDGPV 182
++ G T+ E +++ PV
Sbjct: 139 MSSDVG--TREAEQSLKAQLPV 158
>gi|357134970|ref|XP_003569087.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Brachypodium distachyon]
Length = 945
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 28/37 (75%)
Query: 11 CFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASGGG 47
CFKC +PGH++RDCP+ ++ AP + + +N +A+ GG
Sbjct: 900 CFKCNQPGHYARDCPAQAAGAPQHPAYGNNASAASGG 936
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 25/33 (75%)
Query: 3 NAKAAPTGCFKCGRPGHWSRDCPSSSSSAPSNS 35
NA A+ CFKC +PGH+SRDCP+ SS PS++
Sbjct: 859 NANASSNLCFKCNQPGHYSRDCPAQGSSYPSSA 891
Score = 38.1 bits (87), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 23/33 (69%), Gaps = 3/33 (9%)
Query: 11 CFKCGRPGHWSRDCPSSSSS---APSNSNFPSN 40
CFKC +PGH+SRDCP ++S + N+N SN
Sbjct: 833 CFKCNQPGHFSRDCPGLTTSYGNSAVNANASSN 865
>gi|414872129|tpg|DAA50686.1| TPA: hypothetical protein ZEAMMB73_997132 [Zea mays]
Length = 259
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 29/46 (63%), Gaps = 8/46 (17%)
Query: 11 CFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASGGGGGGSGVGDG 56
CF+CGRPGHW RDCPS++ + FPS + GGSGVG G
Sbjct: 78 CFECGRPGHWVRDCPSAAGG--RSGRFPSKFS------GGSGVGRG 115
>gi|322696299|gb|EFY88093.1| Chromosome segregation in meiosis protein 3 [Metarhizium acridum
CQMa 102]
Length = 282
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 42/90 (46%), Gaps = 4/90 (4%)
Query: 65 IGVKEKPKKLPRSRP---KLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGL 121
+G+ E+ R+R KL + LL GL LR R K +G+GHE SD L+
Sbjct: 48 LGIDEEVSVQKRARAPIVKLDENRLLGPAGLP-KLRQRARELKIKGKGHEFSDAARLLSF 106
Query: 122 YSEWHSHLLPYYSFDHFVSKVEQVAASRRV 151
Y W L P F ++ VE+ +RV
Sbjct: 107 YQMWLDDLFPKAKFLDALAMVEKAGHKKRV 136
>gi|429849709|gb|ELA25062.1| chromosome segregation in meiosis protein 3 [Colletotrichum
gloeosporioides Nara gc5]
Length = 267
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 51/102 (50%), Gaps = 10/102 (9%)
Query: 57 GVSVSKS--AIGVKE-----KPKKLPRSRPKLTPDLLLSDDGLGFVLRHFPRAFKYRGRG 109
GV+ K A+G++E K ++PR KL LLSD+G+ LR +++G+G
Sbjct: 35 GVNKRKQGEALGIEEEVEVNKRARVPRV--KLDEARLLSDNGIP-KLRKRAADLQFKGKG 91
Query: 110 HEVSDLGHLIGLYSEWHSHLLPYYSFDHFVSKVEQVAASRRV 151
HE SD L+ Y W L P F V+ VE+ +++
Sbjct: 92 HEFSDAARLLSFYQLWLDDLFPKAKFLDAVAMVEKTGHKKQI 133
>gi|18092337|gb|AAL59229.1|AF448416_9 gag-pol [Zea mays]
Length = 1470
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 24/50 (48%)
Query: 3 NAKAAPTGCFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASGGGGGGSG 52
NA P GCFKCG GH++ +CP + P SN N+ + G
Sbjct: 289 NAPVQPNGCFKCGELGHYANNCPRRNQQTPQKSNNQRNDQNTPARGSAQN 338
>gi|356536336|ref|XP_003536695.1| PREDICTED: uncharacterized protein LOC100776333 [Glycine max]
Length = 279
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 11 CFKCGRPGHWSRDCP-SSSSSAPSNSNFPSNNTASGGGGGGSGVG 54
CFKCGRPGHW+RDCP + S+FPS GG G +G
Sbjct: 119 CFKCGRPGHWARDCPLAGGGRGRGGSSFPSRPRFGAAGGHGDRLG 163
>gi|350639169|gb|EHA27523.1| hypothetical protein ASPNIDRAFT_41458 [Aspergillus niger ATCC 1015]
Length = 271
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 48/103 (46%), Gaps = 2/103 (1%)
Query: 60 VSKSAIGVKEKPK--KLPRSRPKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGH 117
++ +G+ EK K R KL LLS G+ + K++G+GHE SD
Sbjct: 42 IAAPVLGLDEKVTITKQRRFTVKLDESRLLSHAGIPKLRSTAKSKLKFKGKGHEFSDAAR 101
Query: 118 LIGLYSEWHSHLLPYYSFDHFVSKVEQVAASRRVKMCIRDLRD 160
L+ Y W L P F ++ +E++ S+R++ R+ D
Sbjct: 102 LLNFYQLWLDDLFPRAKFADGLAMIEKLGHSKRLQTMRREWID 144
>gi|317034865|ref|XP_001400636.2| chromosome segregation in meiosis protein 3 [Aspergillus niger CBS
513.88]
Length = 270
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 48/103 (46%), Gaps = 2/103 (1%)
Query: 60 VSKSAIGVKEKPK--KLPRSRPKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGH 117
++ +G+ EK K R KL LLS G+ + K++G+GHE SD
Sbjct: 42 IAAPVLGLDEKVTITKQRRFTVKLDESRLLSHAGIPKLRSTAKSKLKFKGKGHEFSDAAR 101
Query: 118 LIGLYSEWHSHLLPYYSFDHFVSKVEQVAASRRVKMCIRDLRD 160
L+ Y W L P F ++ +E++ S+R++ R+ D
Sbjct: 102 LLNFYQLWLDDLFPRAKFADGLAMIEKLGHSKRLQTMRREWID 144
>gi|452824725|gb|EME31726.1| hypothetical protein Gasu_11030 [Galdieria sulphuraria]
Length = 169
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 69/149 (46%), Gaps = 6/149 (4%)
Query: 74 LPRSRPKLTPDLLLSDD-GLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHLLPY 132
+ R L +L+L++ G+ ++R K + + +G ++ + W + L P
Sbjct: 1 MKEKRVLLNEELILNEQYGIPQLIRELETVQKNLKQESSIETIGKILETWQIWANKLSPN 60
Query: 133 YSFDHFVSKVEQVAASRRVKMCIRDLRDR-VANGGDPTKLHEAAVEHDGPVDEQAPAEAM 191
F FVS+++ + + R ++ + D R+R V + + TK V D V P
Sbjct: 61 MEFGRFVSRLQALQSLRGIRTFLSDQRERLVVSNFEATK---TDVPSDSGVFSDTPNSLR 117
Query: 192 S-SERQPHQQDPASNVHAADDFNDLFNKV 219
+ +R +++ S H++D F+D F +V
Sbjct: 118 TRRDRNNMEENITSKQHSSDSFSDCFTQV 146
>gi|402225540|gb|EJU05601.1| Swi3-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 402
Score = 45.8 bits (107), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Query: 80 KLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHLLPYYSFDHFV 139
K+ + LL + G +++ + FK +G+G E DL ++ LY W + P F V
Sbjct: 98 KIDAERLLGEYGFPALIQQT-KNFKPKGKGREKEDLDRIMTLYQLWAHRMFPKRRFIDTV 156
Query: 140 SKVEQVAASRRVKMCIRDLRDRV 162
+VE+V RR+ + + RD +
Sbjct: 157 ERVEKVCRERRMLVALSVWRDEL 179
>gi|312383018|gb|EFR28259.1| hypothetical protein AND_04035 [Anopheles darlingi]
Length = 273
Score = 45.8 bits (107), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 30/59 (50%)
Query: 94 FVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHLLPYYSFDHFVSKVEQVAASRRVK 152
+R + FK+RG+G EV+DL ++ W L P Y D ++ E++ + V+
Sbjct: 67 IAMRDHFQGFKFRGKGQEVADLDEILRRMEHWAHRLFPKYHLDDVIATAERLGTKKEVQ 125
>gi|378732621|gb|EHY59080.1| replication fork protection complex subunit Swi3/Csm3 [Exophiala
dermatitidis NIH/UT8656]
Length = 606
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 51/101 (50%), Gaps = 9/101 (8%)
Query: 65 IGVKEKPKKLPRSRP--KLTPDLLLSDDGLGFVLR------HFPRAFKYRGRGHEVSDLG 116
+G+ E+ K + +P KL LLS +G+ LR F + + +G+GHE SD+
Sbjct: 60 LGLDEEVKIAKKRKPIAKLDEARLLSAEGIP-KLRALAMSGKFSKKLRLKGKGHEFSDVA 118
Query: 117 HLIGLYSEWHSHLLPYYSFDHFVSKVEQVAASRRVKMCIRD 157
L+ Y W +L P F + +E+V S+R++ ++
Sbjct: 119 RLLNYYQLWLDNLYPRAKFADGLQLIEKVGHSKRMQTMRKE 159
>gi|350297104|gb|EGZ78081.1| chromosome segregation in meiosis protein 3 [Neurospora tetrasperma
FGSC 2509]
Length = 409
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 42/97 (43%), Gaps = 5/97 (5%)
Query: 72 KKLPRSRPKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHLLP 131
KK R KL LLSD G+ R K +G+GHE SD L+ Y EW L P
Sbjct: 61 KKARVPRVKLDDARLLSDKGIP-KFRKTASKLKLKGKGHEFSDAARLLSFYQEWLDDLFP 119
Query: 132 YYSFDHFVSKVEQVAASRRVKMCIRDLRDRVANGGDP 168
+F ++ E+ K +R+ R + G P
Sbjct: 120 KATFVDALAMCEKAGH----KTTLRNARLKWIAEGKP 152
>gi|412988371|emb|CCO17707.1| predicted protein [Bathycoccus prasinos]
Length = 513
Score = 45.8 bits (107), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 37/182 (20%), Positives = 73/182 (40%), Gaps = 34/182 (18%)
Query: 8 PTGCFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTAS---------------GGGGGGSG 52
P C+KCG+ GH+SRDC + P S P + +
Sbjct: 5 PGTCYKCGQTGHYSRDC-----ATPKESWLPKDQREAHFSSLTAKATTTTNNNNKNDDVN 59
Query: 53 VGDGGVSVSKSAIGVKEK--------PK---KLPRSRPKLT-PDLLLSDDGLGFVLRHFP 100
+ + A+ + + PK K + +PK + + +L +G+ V F
Sbjct: 60 DNNNNYEDDERAMDIGDGGAGGTTTTPKAEEKESKRKPKFSVEEHVLGPNGIQKVYETFA 119
Query: 101 RAF--KYRGRGHEVSDLGHLIGLYSEWHSHLLPYYSFDHFVSKVEQVAASRRVKMCIRDL 158
+ + +G+G+E D+ ++G+Y W + PY D + +V ++ + +V+ +
Sbjct: 120 DVYDRERKGKGNETHDIALILGMYRNWAHEMYPYEDPDVVLERVRKLKNNAQVRNAMHSF 179
Query: 159 RD 160
D
Sbjct: 180 MD 181
>gi|242043176|ref|XP_002459459.1| hypothetical protein SORBIDRAFT_02g004930 [Sorghum bicolor]
gi|241922836|gb|EER95980.1| hypothetical protein SORBIDRAFT_02g004930 [Sorghum bicolor]
Length = 301
Score = 45.8 bits (107), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 23/35 (65%)
Query: 6 AAPTGCFKCGRPGHWSRDCPSSSSSAPSNSNFPSN 40
AA CFKCGRPGHW+R+CP S S + P++
Sbjct: 119 AASDDCFKCGRPGHWARECPYSDGSGRTGRYSPAS 153
>gi|310791336|gb|EFQ26865.1| replication Fork Protection Component Swi3 [Glomerella graminicola
M1.001]
Length = 275
Score = 45.4 bits (106), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 52/114 (45%), Gaps = 8/114 (7%)
Query: 63 SAIGVKEK---PKKLPRSRPKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLI 119
A+G+ E+ K++ R KL LLS++G+ LR +++GRGHE SD L+
Sbjct: 44 EALGLDEEVEVAKRVRVPRVKLDETRLLSENGIP-KLRKRATNLRFKGRGHEFSDAARLL 102
Query: 120 GLYSEWHSHLLPYYSFDHFVSKVEQVAASRRVKMCIRDLRDRVANGGDPTKLHE 173
Y W L P F ++ VE+ +++ + D N G P E
Sbjct: 103 AFYQLWLDDLFPKAKFLDALAMVEKAGHKKQIALKRMDW----INEGKPKPWEE 152
>gi|301103077|ref|XP_002900625.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262101888|gb|EEY59940.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 165
Score = 45.4 bits (106), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 40/86 (46%)
Query: 76 RSRPKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHLLPYYSF 135
R R L L+S +G V R FP G E L LI +Y +W L P +F
Sbjct: 48 RRRNMLRESHLVSAEGFKKVHRTFPYQVSADVSGRESQSLASLINMYKQWAFDLYPGLNF 107
Query: 136 DHFVSKVEQVAASRRVKMCIRDLRDR 161
+ F+ + E + +V+ + +LR++
Sbjct: 108 EDFIDRAETLGKGHQVQGLMIELREK 133
>gi|367011088|ref|XP_003680045.1| hypothetical protein TDEL_0B07050 [Torulaspora delbrueckii]
gi|359747703|emb|CCE90834.1| hypothetical protein TDEL_0B07050 [Torulaspora delbrueckii]
Length = 214
Score = 45.4 bits (106), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Query: 74 LPRSRP--KLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHLLP 131
L R RP KLT + L+ + GL +V+++ P+ + R + +L H++ Y W L P
Sbjct: 30 LKRRRPQVKLTAERLIGEKGLPYVMKNAPKRVRISKRRNAHDNLSHIVQFYQLWAHELFP 89
Query: 132 YYSFDHFVS 140
F+ F+
Sbjct: 90 KARFNDFIK 98
>gi|226502460|ref|NP_001151678.1| LOC100285313 [Zea mays]
gi|195648731|gb|ACG43833.1| glycine-rich RNA-binding protein 7 [Zea mays]
gi|223972767|gb|ACN30571.1| unknown [Zea mays]
Length = 293
Score = 45.4 bits (106), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 21/33 (63%)
Query: 6 AAPTGCFKCGRPGHWSRDCPSSSSSAPSNSNFP 38
AA CFKCGRPGHW+R+CP S S + P
Sbjct: 118 AASDDCFKCGRPGHWARECPYSDGSGRTGRYSP 150
>gi|402084938|gb|EJT79956.1| chromosome segregation in meiosis protein 3 [Gaeumannomyces
graminis var. tritici R3-111a-1]
Length = 327
Score = 45.1 bits (105), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 46/97 (47%), Gaps = 12/97 (12%)
Query: 49 GGSGVGDGGVSVSKSAIGVKEKPKKLPRSRPKLTPDLLLSDDGLGFVLRHFPRAFKYRGR 108
GG G+ D +SV+K A ++PR KL LLSD G+ LR K +G+
Sbjct: 45 GGLGI-DEEISVAKRA--------RVPRV--KLDETRLLSDKGIP-ALRKRAGQLKLKGK 92
Query: 109 GHEVSDLGHLIGLYSEWHSHLLPYYSFDHFVSKVEQV 145
GHE SD L+ Y W + P F ++ VE+
Sbjct: 93 GHEFSDAARLLSFYQLWLDDVFPKAKFLDALAMVEKA 129
>gi|410076746|ref|XP_003955955.1| hypothetical protein KAFR_0B05240 [Kazachstania africana CBS 2517]
gi|372462538|emb|CCF56820.1| hypothetical protein KAFR_0B05240 [Kazachstania africana CBS 2517]
Length = 293
Score = 45.1 bits (105), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 46/101 (45%), Gaps = 10/101 (9%)
Query: 40 NNTASGGGGGGSGVGDGGVSVSKSAIGVKEKPKKLPRSRPKLTPDLLLSDDGLGFVLRHF 99
NNTA + + D +AI K + R + KLT + LLSD GL +V ++
Sbjct: 20 NNTADDP----TVIADPTAIADPTAIVTKAR-----RVQVKLTAEKLLSDKGLPYVAKYA 70
Query: 100 PRAFKYRG-RGHEVSDLGHLIGLYSEWHSHLLPYYSFDHFV 139
P+ + R + +L H++ Y W L P F+ F+
Sbjct: 71 PKRLRISSKRKNAYENLSHIVQFYQLWAHDLFPKAKFNDFI 111
>gi|258577765|ref|XP_002543064.1| predicted protein [Uncinocarpus reesii 1704]
gi|237903330|gb|EEP77731.1| predicted protein [Uncinocarpus reesii 1704]
Length = 233
Score = 45.1 bits (105), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 49/98 (50%), Gaps = 2/98 (2%)
Query: 65 IGVKEKPKKLPRSRP--KLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLY 122
+G+ E+ K + P KL + LLS G+ + + + +G+ HE SD+ L+ Y
Sbjct: 40 LGIDEEIKITKKRAPAVKLDENRLLSQAGIPKLRKSADTKLRLKGKHHEFSDVARLLNFY 99
Query: 123 SEWHSHLLPYYSFDHFVSKVEQVAASRRVKMCIRDLRD 160
W L P F ++ +E++ S+R+++ ++ D
Sbjct: 100 QFWLDDLYPRAKFADGLAIIEKLGHSKRLQVMRKEWID 137
>gi|157137757|ref|XP_001657167.1| hypothetical protein AaeL_AAEL003648 [Aedes aegypti]
gi|157137759|ref|XP_001657168.1| hypothetical protein AaeL_AAEL003648 [Aedes aegypti]
gi|108880824|gb|EAT45049.1| AAEL003648-PA [Aedes aegypti]
gi|108880825|gb|EAT45050.1| AAEL003648-PB [Aedes aegypti]
Length = 282
Score = 45.1 bits (105), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 45/95 (47%), Gaps = 1/95 (1%)
Query: 65 IGVKEKPKKLPRSRPKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSE 124
I V+ K K + R L +LL G+ + +F + K++G+GHE DL ++
Sbjct: 48 IPVEPKKKTVRHPRLTLNANLLCGPRGIVDMENYF-KDMKFKGKGHEREDLDAVMKRMQH 106
Query: 125 WHSHLLPYYSFDHFVSKVEQVAASRRVKMCIRDLR 159
W + P Y FD ++ +E + ++ + + R
Sbjct: 107 WAHRMFPKYGFDDSLAAIENLGRKKQTQSYMNKYR 141
>gi|449666876|ref|XP_004206439.1| PREDICTED: TIMELESS-interacting protein-like [Hydra magnipapillata]
Length = 241
Score = 45.1 bits (105), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 29/130 (22%), Positives = 59/130 (45%), Gaps = 8/130 (6%)
Query: 55 DGGVSVSKSAIGVKEKPKKLPRSRPKLTPDLLLSD--DGLGFVLRHFPRAFKYRGRGHEV 112
+ GV++++ +K K++ P L LL + +G+ V +F RGHE+
Sbjct: 34 EAGVTIAE------QKKKRIINRLPPLNQAWLLDEKHEGISKVNSYFKGIKLKSSRGHEL 87
Query: 113 SDLGHLIGLYSEWHSHLLPYYSFDHFVSKVEQVAASRRVKMCIRDLRDRVANGGDPTKLH 172
++L ++ Y W P F FV KVE ++ + ++ ++ R+ N D +
Sbjct: 88 ANLKVILKRYEYWAQQCYPKLCFQDFVEKVEMLSGKKEIRNFLQQNRNENQNTPDFLLTN 147
Query: 173 EAAVEHDGPV 182
+ ++ D +
Sbjct: 148 KLSLRTDSEI 157
>gi|45185330|ref|NP_983047.1| ABR100Wp [Ashbya gossypii ATCC 10895]
gi|74695341|sp|Q75DC6.1|CSM3_ASHGO RecName: Full=Chromosome segregation in meiosis protein 3
gi|44980988|gb|AAS50871.1| ABR100Wp [Ashbya gossypii ATCC 10895]
Length = 240
Score = 45.1 bits (105), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 61/137 (44%), Gaps = 11/137 (8%)
Query: 38 PSNNTASGGGGGGSGVGDGGVS-VSKSAIGVKEKPKKLPRSRPKLTPDLLLSDDGLGFVL 96
P + A+G GGS ++ + SAI V++ R+ KL + L+S GL ++L
Sbjct: 6 PLEDEAAGTELGGSPADPATLTEIDPSAIQVRKT-----RTVVKLDCERLVSKKGLPYLL 60
Query: 97 RHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHLLPYYSFDHFVSKVEQVAASRRV----- 151
++ P+ + R +L H++ Y W L P F FV+ +++ + R
Sbjct: 61 KNAPKHARISKRRDTYGNLCHVLQFYQLWAHELYPKAKFKDFVALCDRLGKTDRQLRAYR 120
Query: 152 KMCIRDLRDRVANGGDP 168
IR+ A G DP
Sbjct: 121 MQLIREELGLAAEGLDP 137
>gi|338808432|gb|AEJ07934.1| Xilon1 gag-pol polyprotein [Zea mays subsp. mexicana]
Length = 1604
Score = 45.1 bits (105), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 5/54 (9%)
Query: 2 ENAKAAPT-----GCFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASGGGGGG 50
+N++AAP CF CG GHW CP ++ S N P+ S G G
Sbjct: 416 QNSQAAPAQVGNRACFHCGEQGHWVMQCPKKAAQQQSGPNAPAKQNVSQPGAGN 469
>gi|255556494|ref|XP_002519281.1| conserved hypothetical protein [Ricinus communis]
gi|223541596|gb|EEF43145.1| conserved hypothetical protein [Ricinus communis]
Length = 1092
Score = 45.1 bits (105), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 7/63 (11%)
Query: 7 APTGCFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASGGGGGGSGVGDGGVSVSKSAIG 66
AP C+KC +PGH SRDC P N + S+N A+GG S V G ++ +
Sbjct: 912 APKVCYKCKKPGHLSRDC-------PENPDDSSHNHANGGPAEESHVDLGRTTLEADRVA 964
Query: 67 VKE 69
++E
Sbjct: 965 MEE 967
>gi|366988005|ref|XP_003673769.1| hypothetical protein NCAS_0A08300 [Naumovozyma castellii CBS 4309]
gi|342299632|emb|CCC67388.1| hypothetical protein NCAS_0A08300 [Naumovozyma castellii CBS 4309]
Length = 322
Score = 45.1 bits (105), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 39/75 (52%)
Query: 76 RSRPKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHLLPYYSF 135
R++ KLT + LLS+ GL +++++ P+ + R +L ++I Y W L P F
Sbjct: 40 RTQVKLTAERLLSERGLPYIMKNAPKRIRISKRKSGYDNLTNIIQFYQLWAHELYPKAKF 99
Query: 136 DHFVSKVEQVAASRR 150
+ F+ + + + R
Sbjct: 100 NDFLKLCQTLGKTDR 114
>gi|50552892|ref|XP_503856.1| YALI0E12287p [Yarrowia lipolytica]
gi|74633740|sp|Q6C656.1|CSM3_YARLI RecName: Full=Chromosome segregation in meiosis protein 3
gi|49649725|emb|CAG79449.1| YALI0E12287p [Yarrowia lipolytica CLIB122]
Length = 368
Score = 44.7 bits (104), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 39/91 (42%), Gaps = 4/91 (4%)
Query: 80 KLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHLLP---YYSFD 136
KL ++ D GL L+H +G GHEV DLG L+ +Y W L P + S
Sbjct: 49 KLDDTRMMDDKGLP-ALKHLCTKVNLKGNGHEVGDLGRLLDMYQMWSHDLFPKGQFKSLY 107
Query: 137 HFVSKVEQVAASRRVKMCIRDLRDRVANGGD 167
SK + A R +++ D R D
Sbjct: 108 PLTSKAGRTATVRGLRLAWIDEEQRKKQTAD 138
>gi|357111298|ref|XP_003557451.1| PREDICTED: uncharacterized protein LOC100823909 [Brachypodium
distachyon]
Length = 258
Score = 44.7 bits (104), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 6 AAPTGCFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASG 45
AA CFKCGRPGHW+R+CP + P S + + +SG
Sbjct: 118 AASDDCFKCGRPGHWARECPYADGGRP-GSRYADDRYSSG 156
>gi|297739973|emb|CBI30155.3| unnamed protein product [Vitis vinifera]
Length = 190
Score = 44.7 bits (104), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 20/31 (64%)
Query: 11 CFKCGRPGHWSRDCPSSSSSAPSNSNFPSNN 41
CFKCGRPGHW+RDCPS F S++
Sbjct: 122 CFKCGRPGHWARDCPSGDGVGSGGGRFSSHS 152
>gi|413933427|gb|AFW67978.1| hypothetical protein ZEAMMB73_339087 [Zea mays]
Length = 311
Score = 44.7 bits (104), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 24/37 (64%), Gaps = 2/37 (5%)
Query: 11 CFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASGGG 47
C++CGRPGHW RDCPS++ + FPS + G G
Sbjct: 116 CYECGRPGHWVRDCPSAAGG--RSGRFPSKFSGGGRG 150
>gi|449465308|ref|XP_004150370.1| PREDICTED: uncharacterized protein LOC101207282 [Cucumis sativus]
gi|449524890|ref|XP_004169454.1| PREDICTED: uncharacterized LOC101207282 [Cucumis sativus]
Length = 283
Score = 44.7 bits (104), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 15/16 (93%), Positives = 16/16 (100%)
Query: 11 CFKCGRPGHWSRDCPS 26
CFKCGRPGHW+RDCPS
Sbjct: 122 CFKCGRPGHWARDCPS 137
>gi|212275991|ref|NP_001130195.1| uncharacterized protein LOC100191289 [Zea mays]
gi|194688516|gb|ACF78342.1| unknown [Zea mays]
Length = 311
Score = 44.3 bits (103), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 24/37 (64%), Gaps = 2/37 (5%)
Query: 11 CFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASGGG 47
C++CGRPGHW RDCPS++ + FPS + G G
Sbjct: 116 CYECGRPGHWVRDCPSAAGG--RSGRFPSKFSGGGRG 150
>gi|9294244|dbj|BAB02146.1| copia retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 526
Score = 44.3 bits (103), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 16/26 (61%), Positives = 19/26 (73%)
Query: 10 GCFKCGRPGHWSRDCPSSSSSAPSNS 35
GCF C R GHW R+CP SS+ PS+S
Sbjct: 227 GCFICRREGHWKRECPEKSSNKPSSS 252
>gi|255711366|ref|XP_002551966.1| KLTH0B04092p [Lachancea thermotolerans]
gi|238933344|emb|CAR21528.1| KLTH0B04092p [Lachancea thermotolerans CBS 6340]
Length = 278
Score = 44.3 bits (103), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 40/89 (44%), Gaps = 3/89 (3%)
Query: 51 SGVGDGGVSVSKSAIGVKEKPKKLPRSRPKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGH 110
SG+G G + + V + + R + KLT + L S GL V++H PR + R
Sbjct: 33 SGLGPDGDAPLQDPTAVTTRVR---RPQVKLTAEKLCSAKGLPAVMKHAPRRLRISKRRS 89
Query: 111 EVSDLGHLIGLYSEWHSHLLPYYSFDHFV 139
+L HL+ Y W L P F FV
Sbjct: 90 SYDNLCHLLQFYQLWAHDLYPKAKFHDFV 118
>gi|296412546|ref|XP_002835985.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295629782|emb|CAZ80142.1| unnamed protein product [Tuber melanosporum]
Length = 288
Score = 44.3 bits (103), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 48/95 (50%), Gaps = 2/95 (2%)
Query: 61 SKSAIGVKEKPK-KLPRSRPKLTPDLLLSDD-GLGFVLRHFPRAFKYRGRGHEVSDLGHL 118
+K +G++E+ K + R KL LL +D G+ + R + +++G+G+E D L
Sbjct: 43 TKDNLGLEEEVKIRKKRINVKLDEARLLREDIGIPKLRREAHKKLRFKGKGYEYRDAARL 102
Query: 119 IGLYSEWHSHLLPYYSFDHFVSKVEQVAASRRVKM 153
+ Y W L F + +E++ SRR+KM
Sbjct: 103 LSYYQLWADDLYKKAKFRDTLQIIEKLGHSRRMKM 137
>gi|346980042|gb|EGY23494.1| Swi3 domain-containing protein [Verticillium dahliae VdLs.17]
Length = 283
Score = 44.3 bits (103), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 55/121 (45%), Gaps = 16/121 (13%)
Query: 52 GVG-DGGVSVSKSAIGVKEKPKKLPRSRPKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGH 110
G+G D V V+K A ++PR KL LLS+DG+ LR K +G+GH
Sbjct: 48 GLGLDEEVDVAKRA--------RVPRI--KLDETRLLSEDGIP-KLRRRAADLKLKGKGH 96
Query: 111 EVSDLGHLIGLYSEWHSHLLPYYSFDHFVSKVEQVAASRRVK----MCIRDLRDRVANGG 166
E SD L+ Y W L P F ++ VE+ R ++ I +L+ R +
Sbjct: 97 EFSDAARLLTFYQFWLDDLFPKAKFLDGLAMVEKAGHKRTLQSKRIEWIDELKPRASAAA 156
Query: 167 D 167
D
Sbjct: 157 D 157
>gi|47824950|gb|AAT38724.1| Putative retrotransposon protein, identical [Solanum demissum]
Length = 1602
Score = 43.9 bits (102), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 28/54 (51%), Gaps = 13/54 (24%)
Query: 9 TGCFKCGRPGHWSRDCP-------------SSSSSAPSNSNFPSNNTASGGGGG 49
TGCFKCG+ GH+ ++CP SSS AP + P T+S GGG
Sbjct: 398 TGCFKCGQEGHFVKECPKNNQGSGSLGSRTQSSSVAPPDRMTPRGATSSTGGGA 451
>gi|413933428|gb|AFW67979.1| hypothetical protein ZEAMMB73_339087 [Zea mays]
Length = 273
Score = 43.9 bits (102), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 24/37 (64%), Gaps = 2/37 (5%)
Query: 11 CFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASGGG 47
C++CGRPGHW RDCPS++ + FPS + G G
Sbjct: 78 CYECGRPGHWVRDCPSAAGG--RSGRFPSKFSGGGRG 112
>gi|403306081|ref|XP_003943574.1| PREDICTED: LOW QUALITY PROTEIN: TIMELESS-interacting protein-like
[Saimiri boliviensis boliviensis]
Length = 307
Score = 43.9 bits (102), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 61/130 (46%), Gaps = 13/130 (10%)
Query: 54 GDGGVSVSKSAIG--VKEKPKKL-PRSRPKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGH 110
GDG +S G V P+K R+ +L L+S+ GL + F +A K++G+GH
Sbjct: 35 GDGAEPDEESGSGAPVPAPPEKTAERNISRLDAQRLVSERGLPALGHAFDKA-KFKGKGH 93
Query: 111 EVSDLGHLIGLYSEWHSHLLPYYSFDHFVSKVEQVAASRRVKMCIRDLR--------DRV 162
E DL LI + H +P F+ F +VE + + V+ ++ ++ D V
Sbjct: 94 EAEDLKTLIRCTEDAH-RAIPKLQFEDFTDRVECLGNKKEVQTFLKQIQLHFPILPEDCV 152
Query: 163 ANGGDPTKLH 172
+N + + H
Sbjct: 153 SNNNEVVQTH 162
>gi|320170056|gb|EFW46955.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 621
Score = 43.9 bits (102), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 1/84 (1%)
Query: 78 RPKLTPDLLLSD-DGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHLLPYYSFD 136
RPK+ + L+ +GL +L PR R +G E SDL LI Y +W +L SF
Sbjct: 232 RPKMDAERLIEHGNGLAKLLEDSPRLPFRRVKGSEASDLKILIAYYQQWTHNLYNSMSFG 291
Query: 137 HFVSKVEQVAASRRVKMCIRDLRD 160
+ ++E + V+ + LR+
Sbjct: 292 DMLERLESLGKKGAVRNYVDTLRN 315
>gi|47824970|gb|AAT38744.1| Putative gag-pol polyprotein, identical [Solanum demissum]
Length = 1515
Score = 43.9 bits (102), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 28/54 (51%), Gaps = 13/54 (24%)
Query: 9 TGCFKCGRPGHWSRDCP-------------SSSSSAPSNSNFPSNNTASGGGGG 49
TGCFKCG+ GH+ ++CP SSS AP + P T+S GGG
Sbjct: 392 TGCFKCGQEGHFVKECPKNNQGSGSLGSRTQSSSVAPPDRMTPRGATSSTGGGA 445
>gi|225441175|ref|XP_002265930.1| PREDICTED: uncharacterized protein LOC100257264 [Vitis vinifera]
Length = 332
Score = 43.9 bits (102), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 19/30 (63%)
Query: 11 CFKCGRPGHWSRDCPSSSSSAPSNSNFPSN 40
CFKCGRPGHW+RDCPS F S+
Sbjct: 170 CFKCGRPGHWARDCPSGDGVGSGGGRFSSH 199
>gi|48475173|gb|AAT44242.1| putative ubiquitin carrier protein [Oryza sativa Japonica Group]
Length = 974
Score = 43.9 bits (102), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 11 CFKCGRPGHWSRDCPSSSS-SAPSNSNFPSNNTASGGGGGGSGVGD 55
CF CG+PGH +R CP AP+ S N G G GSG G+
Sbjct: 205 CFVCGQPGHLARKCPQRKGMKAPAEQTSKSANVTIGNTGDGSGYGN 250
>gi|340519713|gb|EGR49951.1| predicted protein [Trichoderma reesei QM6a]
Length = 317
Score = 43.9 bits (102), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 41/86 (47%), Gaps = 4/86 (4%)
Query: 63 SAIGVKEKPKKLPRSRP---KLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLI 119
S +G++E+ R+R KL + LL DG+ LR K +G+GHE SD L+
Sbjct: 46 SGLGIEEEVSVQKRARVPAVKLDEERLLGPDGIP-KLRKRAAGLKLKGKGHEFSDASRLL 104
Query: 120 GLYSEWHSHLLPYYSFDHFVSKVEQV 145
Y W L P F ++ VE+
Sbjct: 105 SFYQLWLDDLFPKARFLDALAMVEKT 130
>gi|31432272|gb|AAP53927.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1297
Score = 43.5 bits (101), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 11 CFKCGRPGHWSRDCPS-SSSSAPSNSNFPSNNTASGGGGGGSGVGD 55
CF CG+ GH +R CP AP+ F S N G G GSG G+
Sbjct: 242 CFVCGQVGHLARKCPQHKGMKAPAGQTFKSANVTIGNTGDGSGYGN 287
>gi|40538957|gb|AAR87214.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
sativa Japonica Group]
Length = 1393
Score = 43.5 bits (101), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 11 CFKCGRPGHWSRDCPSSSS-SAPSNSNFPSNNTASGGGGGGSGVGD 55
CF CG+ GH +R CP AP+ F S N G G GSG G+
Sbjct: 319 CFVCGQVGHLARKCPQRKGMKAPAGQTFKSANVTIGNTGDGSGYGN 364
>gi|229593856|ref|XP_001026337.3| hypothetical protein TTHERM_00670160 [Tetrahymena thermophila]
gi|225567254|gb|EAS06092.3| hypothetical protein TTHERM_00670160 [Tetrahymena thermophila
SB210]
Length = 379
Score = 43.5 bits (101), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 29/135 (21%), Positives = 62/135 (45%), Gaps = 21/135 (15%)
Query: 80 KLTPDLLLSDD-GLGFVLRHFPRA--FKYRGRG--HEVSDLGHLIGLYSEWHSHLLPYYS 134
+ D+L + + G+ F+ + +A F +G E+ L L+ Y WH H +P YS
Sbjct: 90 RFKADMLTNQERGIKFLYENIEKAKLFDKNEKGIFDELKALDKLVNYYKGWHFHFMPKYS 149
Query: 135 FDHFVSKVEQVAASRRVKMCIRDLRDRVANGGDPTKLHEAAVEHDGPVDEQAPAEAMSSE 194
+ +F+ + + + +K + ++R ++H+ ++ VD+ + +E
Sbjct: 150 YQYFLDRCTEFGKTSLIKTYMNNVR----------RIHKGELQWKDLVDQ------VENE 193
Query: 195 RQPHQQDPASNVHAA 209
Q ++ DP + AA
Sbjct: 194 NQQNENDPNNPKEAA 208
>gi|108709742|gb|ABF97537.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1397
Score = 43.5 bits (101), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 11 CFKCGRPGHWSRDCPSSSS-SAPSNSNFPSNNTASGGGGGGSGVGD 55
CF CG+ GH +R CP AP+ F S N G G GSG G+
Sbjct: 319 CFVCGQVGHLARKCPQRKGMKAPAGQTFKSANVTIGNTGDGSGYGN 364
>gi|147817638|emb|CAN64497.1| hypothetical protein VITISV_004037 [Vitis vinifera]
Length = 480
Score = 43.5 bits (101), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 14/15 (93%), Positives = 15/15 (100%)
Query: 11 CFKCGRPGHWSRDCP 25
CFKCGRPGHW+RDCP
Sbjct: 313 CFKCGRPGHWARDCP 327
>gi|38346883|emb|CAE03908.2| OSJNBb0015G09.2 [Oryza sativa Japonica Group]
Length = 1039
Score = 43.5 bits (101), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 11 CFKCGRPGHWSRDCPSSSS-SAPSNSNFPSNNTASGGGGGGSGVGD 55
CF CG+PGH +R CP AP+ S N G G GSG G+
Sbjct: 245 CFVCGQPGHLARKCPQRKGMKAPAGQTSKSANVTIGNTGDGSGYGN 290
>gi|281201718|gb|EFA75926.1| Polyprotein [Polysphondylium pallidum PN500]
Length = 904
Score = 43.1 bits (100), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 4 AKAAPTG-CFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASGGGGGG 50
++A P G CFKCG+PGH+ +DCP +++ A + N+ +GG G
Sbjct: 211 SQAKPRGSCFKCGQPGHFRKDCPLNNNDALVLDVVSTGNSTNGGQEPG 258
>gi|320592717|gb|EFX05138.1| replication fork protection component [Grosmannia clavigera kw1407]
Length = 309
Score = 43.1 bits (100), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 48/107 (44%), Gaps = 12/107 (11%)
Query: 39 SNNTASGGGGGGSGVG-DGGVSVSKSAIGVKEKPKKLPRSRPKLTPDLLLSDDGLGFVLR 97
S + GG +G+G D V V K A + PR KL +LS G+ LR
Sbjct: 42 SGKSKKAGGDVTAGLGIDEEVDVKKRA--------REPRV--KLDETRILSAKGIP-ALR 90
Query: 98 HFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHLLPYYSFDHFVSKVEQ 144
R K +G+GHE +D L+ +Y W L P F ++ VE+
Sbjct: 91 QRARNLKLKGKGHEFADASRLLSMYQLWLDDLFPKARFGDALAMVEK 137
>gi|24899398|gb|AAN64998.1| Putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|108707933|gb|ABF95728.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1040
Score = 43.1 bits (100), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 11 CFKCGRPGHWSRDCPSSSS-SAPSNSNFPSNNTASGGGGGGSGVGD 55
CF CG+PGH +R CP AP+ S N G G GSG G+
Sbjct: 339 CFVCGQPGHLARKCPQRKGMKAPAGQTSKSANVTIGNTGDGSGYGN 384
>gi|15237666|ref|NP_196048.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|20260152|gb|AAM12974.1| RNA-binding protein-like [Arabidopsis thaliana]
gi|21387121|gb|AAM47964.1| RNA-binding protein-like [Arabidopsis thaliana]
gi|332003340|gb|AED90723.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 310
Score = 43.1 bits (100), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 11 CFKCGRPGHWSRDCPSS-SSSAPSNSNFPSNNTASGGGGG 49
CFKCGR GHW+RDCPS+ F S +A GG G
Sbjct: 128 CFKCGRVGHWARDCPSAGGGRGGPVGGFSSRASAYGGSDG 167
>gi|392597031|gb|EIW86353.1| hypothetical protein CONPUDRAFT_133797 [Coniophora puteana
RWD-64-598 SS2]
Length = 453
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 14/23 (60%), Positives = 19/23 (82%)
Query: 8 PTGCFKCGRPGHWSRDCPSSSSS 30
P+ CFKCG+PGHW+R+CP+ S
Sbjct: 166 PSACFKCGQPGHWARECPNGDGS 188
>gi|156839810|ref|XP_001643592.1| hypothetical protein Kpol_1073p22 [Vanderwaltozyma polyspora DSM
70294]
gi|156114209|gb|EDO15734.1| hypothetical protein Kpol_1073p22 [Vanderwaltozyma polyspora DSM
70294]
Length = 248
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 45/99 (45%), Gaps = 5/99 (5%)
Query: 53 VGDGGVSVSKSAIGVKEKPKKLPRSRPKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEV 112
V D ++ +A+ K++ + KL+ D LLSD GL +VL + P+ + +
Sbjct: 18 VKDNSNTLDPTAVITKKRKPTV-----KLSSDQLLSDRGLPYVLANGPKRIRISKKNSNH 72
Query: 113 SDLGHLIGLYSEWHSHLLPYYSFDHFVSKVEQVAASRRV 151
+L ++I Y W + P F F+ + S R+
Sbjct: 73 QNLNNIILFYQLWAHDVFPRAKFKDFIKLCNTLGKSDRI 111
>gi|227206224|dbj|BAH57167.1| AT5G04280 [Arabidopsis thaliana]
Length = 272
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 11 CFKCGRPGHWSRDCPSS-SSSAPSNSNFPSNNTASGGGGG 49
CFKCGR GHW+RDCPS+ F S +A GG G
Sbjct: 90 CFKCGRVGHWARDCPSAGGGRGGPVGGFSSRASAYGGSDG 129
>gi|294896562|ref|XP_002775619.1| retrovirus polyprotein, putative [Perkinsus marinus ATCC 50983]
gi|239881842|gb|EER07435.1| retrovirus polyprotein, putative [Perkinsus marinus ATCC 50983]
Length = 1454
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 27/60 (45%)
Query: 1 MENAKAAPTGCFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASGGGGGGSGVGDGGVSV 60
+EN + CF+CG+ GH+ RDCP ++ S+ SG GG G V
Sbjct: 357 VENPRKKVQNCFECGQTGHFKRDCPKKKATTTMAGESSSSEKRSGAAGGQKTTRSGHTYV 416
>gi|297840491|ref|XP_002888127.1| hypothetical protein ARALYDRAFT_315285 [Arabidopsis lyrata subsp.
lyrata]
gi|297333968|gb|EFH64386.1| hypothetical protein ARALYDRAFT_315285 [Arabidopsis lyrata subsp.
lyrata]
Length = 286
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 15/25 (60%), Positives = 18/25 (72%)
Query: 3 NAKAAPTGCFKCGRPGHWSRDCPSS 27
K + CFKC RPGHW+RDCPS+
Sbjct: 109 RGKGSEDECFKCRRPGHWARDCPST 133
>gi|380472895|emb|CCF46554.1| chromosome segregation in meiosis protein 3 [Colletotrichum
higginsianum]
Length = 301
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 70/147 (47%), Gaps = 17/147 (11%)
Query: 63 SAIGVKEKPKKLPRSR-PKLTPD--LLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLI 119
A+G+ E+ + + R+R P++ D LLS++G+ LR +++G+G+E SD L+
Sbjct: 77 EALGLDEEVEVVKRARVPRVKLDEARLLSENGIP-KLRKRAAKLEFKGKGNEFSDAARLL 135
Query: 120 GLYSEWHSHLLPYYSFDHFVSKVEQVAASRRVKMCIRDLRDRVANGGDPT--KLHEAAVE 177
Y W L P F ++ VE+ +++ + D N G P K+ E ++
Sbjct: 136 TFYQLWLDDLFPKAKFLDALAMVEKAGHKKQIALKRMDW----INEGKPKPWKVDEDNIK 191
Query: 178 HDGPVDEQ-------APAEAMSSERQP 197
Q APA++ S+ +QP
Sbjct: 192 GQAQTMAQQNDNIPLAPAQSTSTGQQP 218
>gi|151946207|gb|EDN64438.1| chromosome segregation in meiosis-related protein [Saccharomyces
cerevisiae YJM789]
Length = 314
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 36/73 (49%)
Query: 76 RSRPKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHLLPYYSF 135
R + KLT + LLSD GL +VL++ + + + + +L ++I Y W L P F
Sbjct: 49 RPQVKLTAEKLLSDKGLPYVLKNARKRIRISSKKNSYDNLSNIIQFYQLWAHELFPKAKF 108
Query: 136 DHFVSKVEQVAAS 148
F+ + V +
Sbjct: 109 KDFMKICQTVGKT 121
>gi|297806401|ref|XP_002871084.1| hypothetical protein ARALYDRAFT_487209 [Arabidopsis lyrata subsp.
lyrata]
gi|297316921|gb|EFH47343.1| hypothetical protein ARALYDRAFT_487209 [Arabidopsis lyrata subsp.
lyrata]
Length = 307
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 5 KAAPTGCFKCGRPGHWSRDCPSSS-SSAPSNSNFPSNNTASGG 46
+ A CFKCGR GHW+RDCPS++ F S A GG
Sbjct: 120 RVAEDECFKCGRVGHWARDCPSAAGGRGGPVGGFSSRAGAFGG 162
>gi|444315317|ref|XP_004178316.1| hypothetical protein TBLA_0A10180 [Tetrapisispora blattae CBS 6284]
gi|387511355|emb|CCH58797.1| hypothetical protein TBLA_0A10180 [Tetrapisispora blattae CBS 6284]
Length = 340
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 29/60 (48%)
Query: 80 KLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHLLPYYSFDHFV 139
KLT + LL GL F++++ P+ + R +L +++ Y W L P F F+
Sbjct: 57 KLTSERLLCQKGLPFIMKNAPKRIRISKRKSNYDNLSNIVQFYQLWAHELFPKARFKDFI 116
>gi|218186479|gb|EEC68906.1| hypothetical protein OsI_37574 [Oryza sativa Indica Group]
Length = 342
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 24/44 (54%), Gaps = 7/44 (15%)
Query: 11 CFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASGGGGGGSGVG 54
CF CG+PGHW++DC P + + S N GGG SG G
Sbjct: 214 CFVCGKPGHWAKDC-------PEHKDRKSANMVISEGGGTSGYG 250
>gi|113205218|gb|AAT39297.2| Gag-pol protein, putative [Solanum demissum]
Length = 1554
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 26/52 (50%), Gaps = 11/52 (21%)
Query: 9 TGCFKCGRPGHWSRDCP-----------SSSSSAPSNSNFPSNNTASGGGGG 49
GCFKCG+ GH+ R+CP SSS P + P T+S GGG
Sbjct: 475 IGCFKCGQNGHFMRECPKNRQGNGGNRAQSSSVVPLDMTAPRGATSSTGGGA 526
>gi|403166354|ref|XP_003326221.2| DNA topoisomerase III [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375166208|gb|EFP81802.2| DNA topoisomerase III [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 1124
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 24/38 (63%), Gaps = 6/38 (15%)
Query: 6 AAPTGCFKCGRPGHWSRDCPSSS------SSAPSNSNF 37
A TGCFKCG+ GHWS +CP+ S S PS SN+
Sbjct: 984 ADKTGCFKCGQQGHWSSECPNPSQGNNNKSIQPSGSNY 1021
>gi|401624395|gb|EJS42455.1| csm3p [Saccharomyces arboricola H-6]
Length = 329
Score = 42.4 bits (98), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 35/73 (47%)
Query: 76 RSRPKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHLLPYYSF 135
R + KLT + LLSD GL +VL++ + + R +L ++I Y W L P F
Sbjct: 49 RPQIKLTAEKLLSDRGLPYVLKNAHKRIRISSRKDPFDNLSNIIQFYQLWAHELFPKAKF 108
Query: 136 DHFVSKVEQVAAS 148
F+ + V +
Sbjct: 109 KDFMEICQTVGKT 121
>gi|392297208|gb|EIW08308.1| Csm3p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 314
Score = 42.4 bits (98), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 36/73 (49%)
Query: 76 RSRPKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHLLPYYSF 135
R + KLT + LLSD GL +VL++ + + + + +L ++I Y W L P F
Sbjct: 49 RPQVKLTAEKLLSDKGLPYVLKNAHKRIRISSKKNSYDNLSNIIQFYQLWAHELFPKAKF 108
Query: 136 DHFVSKVEQVAAS 148
F+ + V +
Sbjct: 109 KDFMKICQTVGKT 121
>gi|349580332|dbj|GAA25492.1| K7_Csm3p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 314
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 36/73 (49%)
Query: 76 RSRPKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHLLPYYSF 135
R + KLT + LLSD GL +VL++ + + + + +L ++I Y W L P F
Sbjct: 49 RPQVKLTAEKLLSDKGLPYVLKNAHKRIRISSKKNSYDNLSNIIQFYQLWAHELFPKAKF 108
Query: 136 DHFVSKVEQVAAS 148
F+ + V +
Sbjct: 109 KDFMKICQTVGKT 121
>gi|77553063|gb|ABA95859.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 503
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 24/44 (54%), Gaps = 7/44 (15%)
Query: 11 CFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASGGGGGGSGVG 54
CF CG+PGHW++DC P + + S N GGG SG G
Sbjct: 275 CFVCGKPGHWAKDC-------PEHKDRKSANMVISEGGGTSGYG 311
>gi|358393311|gb|EHK42712.1| hypothetical protein TRIATDRAFT_149814 [Trichoderma atroviride IMI
206040]
Length = 316
Score = 42.4 bits (98), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 47/98 (47%), Gaps = 5/98 (5%)
Query: 63 SAIGVKEKPKKLPRSRP---KLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLI 119
S +G++E+ R R KL + LL DG+ LR +++G+GHE D L+
Sbjct: 56 SGLGIEEEVSVQKRVRVPNVKLDEEKLLGPDGIP-TLRKRGEMLRFKGKGHEYRDTARLL 114
Query: 120 GLYSEWHSHLLPYYSFDHFVSKVEQVAASRRVKMCIRD 157
LY W L P F ++ VE+ A ++ + RD
Sbjct: 115 FLYQLWLDDLYPKARFLDALAMVEK-AGHKKALVAARD 151
>gi|38344416|emb|CAE02382.2| OSJNBb0080H08.8 [Oryza sativa Japonica Group]
Length = 1183
Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 7/44 (15%)
Query: 11 CFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASGGGGGGSGVG 54
CF CG+PGHW+++CP S N GGG SG G
Sbjct: 413 CFVCGKPGHWAKNCPDRKDKK-------SANMVISEGGGTSGYG 449
>gi|18406831|ref|NP_564759.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|30696446|ref|NP_849832.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|2462758|gb|AAB71977.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|21593771|gb|AAM65738.1| RNA binding protein, putative [Arabidopsis thaliana]
gi|26983818|gb|AAN86161.1| putative glycine-rich RNA binding protein [Arabidopsis thaliana]
gi|62321068|dbj|BAD94150.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|332195593|gb|AEE33714.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332195594|gb|AEE33715.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 292
Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 15/24 (62%), Positives = 17/24 (70%)
Query: 4 AKAAPTGCFKCGRPGHWSRDCPSS 27
K CFKC RPGHW+RDCPS+
Sbjct: 110 GKGTEDECFKCRRPGHWARDCPST 133
>gi|207342391|gb|EDZ70168.1| YMR048Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256273499|gb|EEU08433.1| Csm3p [Saccharomyces cerevisiae JAY291]
gi|259148624|emb|CAY81869.1| Csm3p [Saccharomyces cerevisiae EC1118]
gi|365763777|gb|EHN05303.1| Csm3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 317
Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 36/73 (49%)
Query: 76 RSRPKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHLLPYYSF 135
R + KLT + LLSD GL +VL++ + + + + +L ++I Y W L P F
Sbjct: 49 RPQVKLTAEKLLSDKGLPYVLKNAHKRIRISSKKNSYDNLSNIIQFYQLWAHELFPKAKF 108
Query: 136 DHFVSKVEQVAAS 148
F+ + V +
Sbjct: 109 KDFMKICQTVGKT 121
>gi|317157689|ref|XP_003190870.1| chromosome segregation in meiosis protein 3 [Aspergillus oryzae
RIB40]
Length = 270
Score = 42.0 bits (97), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 33/61 (54%)
Query: 97 RHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHLLPYYSFDHFVSKVEQVAASRRVKMCIR 156
R + K++G+GHE SD+ L+ Y W L P F ++ +E++ +R+++ R
Sbjct: 77 RTAKQKLKFKGKGHEFSDVARLLQFYQLWLDDLFPRAKFADGLTIIEKLGHHKRLQVMRR 136
Query: 157 D 157
+
Sbjct: 137 E 137
>gi|323336259|gb|EGA77530.1| Csm3p [Saccharomyces cerevisiae Vin13]
Length = 317
Score = 42.0 bits (97), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 36/73 (49%)
Query: 76 RSRPKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHLLPYYSF 135
R + KLT + LLSD GL +VL++ + + + + +L ++I Y W L P F
Sbjct: 49 RPQVKLTAEKLLSDKGLPYVLKNAHKRIRISSKKNSYDNLSNIIQFYQLWAHELFPKAKF 108
Query: 136 DHFVSKVEQVAAS 148
F+ + V +
Sbjct: 109 KDFMKICQTVGKT 121
>gi|168036414|ref|XP_001770702.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678063|gb|EDQ64526.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 165
Score = 42.0 bits (97), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 21/36 (58%)
Query: 11 CFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASGG 46
CFKCG+PGHW+R+CPSS + + + G
Sbjct: 118 CFKCGQPGHWARECPSSGGDRGAGGRYSGRDRYDSG 153
>gi|6323692|ref|NP_013763.1| Csm3p [Saccharomyces cerevisiae S288c]
gi|2497131|sp|Q04659.1|CSM3_YEAST RecName: Full=Chromosome segregation in meiosis protein 3
gi|817881|emb|CAA89758.1| unknown [Saccharomyces cerevisiae]
gi|45270690|gb|AAS56726.1| YMR048W [Saccharomyces cerevisiae]
gi|285814052|tpg|DAA09947.1| TPA: Csm3p [Saccharomyces cerevisiae S288c]
Length = 317
Score = 42.0 bits (97), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 36/73 (49%)
Query: 76 RSRPKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHLLPYYSF 135
R + KLT + LLSD GL +VL++ + + + + +L ++I Y W L P F
Sbjct: 49 RPQVKLTAEKLLSDKGLPYVLKNAHKRIRISSKKNSYDNLSNIIQFYQLWAHELFPKAKF 108
Query: 136 DHFVSKVEQVAAS 148
F+ + V +
Sbjct: 109 KDFMKICQTVGKT 121
>gi|440631898|gb|ELR01817.1| hypothetical protein GMDG_00917 [Geomyces destructans 20631-21]
Length = 222
Score = 42.0 bits (97), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 26/56 (46%)
Query: 96 LRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHLLPYYSFDHFVSKVEQVAASRRV 151
LR R + +G+GHE D L+GLY W L P F + VE V + V
Sbjct: 37 LRERARTLRLKGKGHEYGDAERLLGLYQMWLDDLYPKAKFGDALRMVEGVGHKKTV 92
>gi|116309152|emb|CAH66252.1| OSIGBa0139I12.1 [Oryza sativa Indica Group]
Length = 1585
Score = 42.0 bits (97), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 9/65 (13%)
Query: 6 AAPTGCFKCGRPGHWSRDCPS----SSSSAPSNSNFPS-----NNTASGGGGGGSGVGDG 56
+ P CF CG PGH++ CP ++ AP+NSN P+ N+ A+ V G
Sbjct: 530 SKPVVCFNCGDPGHYADKCPKPRRVKNAPAPNNSNVPAPKARVNHVAAAEAQNAPDVVLG 589
Query: 57 GVSVS 61
SV+
Sbjct: 590 TFSVN 594
>gi|51854274|gb|AAU10655.1| polyprotein [Oryza sativa Japonica Group]
Length = 1286
Score = 42.0 bits (97), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 5/42 (11%)
Query: 11 CFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASGGGGGGSG 52
CF CG+PGHW++DCP +N + GGG G G
Sbjct: 358 CFVCGKPGHWAKDCPERKDKKSANMVI-----SEGGGTLGYG 394
>gi|242117543|dbj|BAH80026.1| putative retrotransposon protein [Oryza sativa Indica Group]
Length = 1666
Score = 42.0 bits (97), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 9/65 (13%)
Query: 6 AAPTGCFKCGRPGHWSRDCPS----SSSSAPSNSNFPS-----NNTASGGGGGGSGVGDG 56
+ P CF CG PGH++ CP ++SAP+NSN P+ N+ A+ V G
Sbjct: 538 SKPVICFNCGDPGHYADKCPKPRRVKNASAPNNSNVPAPKARVNHVAAAEAQNAPDVVLG 597
Query: 57 GVSVS 61
V+
Sbjct: 598 TFPVN 602
>gi|108707890|gb|ABF95685.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1061
Score = 42.0 bits (97), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 7/44 (15%)
Query: 11 CFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASGGGGGGSGVG 54
CF CG+PGHW+++CP S N GGG SG G
Sbjct: 320 CFVCGKPGHWAKNCPDRKDKK-------SANMVISEGGGTSGYG 356
>gi|116309024|emb|CAH66139.1| H0616A11.3 [Oryza sativa Indica Group]
Length = 1451
Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 9/65 (13%)
Query: 6 AAPTGCFKCGRPGHWSRDCPS----SSSSAPSNSNFPS-----NNTASGGGGGGSGVGDG 56
+ P CF CG PGH++ CP ++SAP+NSN P+ N+ A+ V G
Sbjct: 315 SKPVICFNCGDPGHYADKCPKPRRVKNASAPNNSNVPAPKARVNHVAAAEAQNAPDVVLG 374
Query: 57 GVSVS 61
V+
Sbjct: 375 TFPVN 379
>gi|323353038|gb|EGA85338.1| Csm3p [Saccharomyces cerevisiae VL3]
Length = 317
Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 36/73 (49%)
Query: 76 RSRPKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHLLPYYSF 135
R + KLT + LLSD GL +VL++ + + + + +L ++I Y W L P F
Sbjct: 49 RPQVKLTAEKLLSDKGLPYVLKNAHKRIRISSKKNSYDNLSNIIQFYQLWAHELFPKAKF 108
Query: 136 DHFVSKVEQVAAS 148
F+ + V +
Sbjct: 109 KDFMKICQTVGKT 121
>gi|218198054|gb|EEC80481.1| hypothetical protein OsI_22711 [Oryza sativa Indica Group]
Length = 360
Score = 41.6 bits (96), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 11 CFKCGRPGHWSRDCPSSSS-SAPSNSNFPSNNTASGGGGGGSGVGD 55
CF CG+PGH +R CP AP+ S N G G GSG G+
Sbjct: 112 CFVCGQPGHLARKCPQRKGMKAPAGQTSKSANVTIGNTGDGSGYGN 157
>gi|113205406|gb|AAU90308.2| Zinc knuckle family protein [Solanum tuberosum]
Length = 347
Score = 41.6 bits (96), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 27/53 (50%), Gaps = 13/53 (24%)
Query: 9 TGCFKCGRPGHWSRDCP-------------SSSSSAPSNSNFPSNNTASGGGG 48
TGCFKCG+ GH+ ++CP +SS AP P T+S GGG
Sbjct: 209 TGCFKCGQEGHFLKECPKNRQGSGNLSNRAQASSVAPPYMMVPRGATSSTGGG 261
>gi|224109842|ref|XP_002315330.1| predicted protein [Populus trichocarpa]
gi|222864370|gb|EEF01501.1| predicted protein [Populus trichocarpa]
Length = 280
Score = 41.6 bits (96), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 15/22 (68%), Positives = 17/22 (77%)
Query: 6 AAPTGCFKCGRPGHWSRDCPSS 27
A CFKCGR GHW+RDCPS+
Sbjct: 115 AGQDECFKCGRSGHWARDCPSA 136
>gi|242794441|ref|XP_002482374.1| replication fork protection component Swi3, putative [Talaromyces
stipitatus ATCC 10500]
gi|218718962|gb|EED18382.1| replication fork protection component Swi3, putative [Talaromyces
stipitatus ATCC 10500]
Length = 235
Score = 41.6 bits (96), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 57/136 (41%), Gaps = 15/136 (11%)
Query: 94 FVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHLLPYYSFDHFVSKVEQVAASRRVKM 153
++L + F+ + SDLG L+ Y W L P F ++ +E++ S+R+++
Sbjct: 17 YLLLNLNNEFQIDNISLQFSDLGRLLNFYQLWLDDLYPRAKFADGLAMIEKLGHSKRIQI 76
Query: 154 CIRDLRDRVANGGDPTKLHEAAVE----HD--GPVDE--QAPAEAMSSERQPHQQDPASN 205
+R N P L A E HD PV E +AP ++ +N
Sbjct: 77 ----MRREWINEEKPDYLRNADDEDHNNHDNSNPVAERDEAPGAQTATNNDTSAD---AN 129
Query: 206 VHAADDFNDLFNKVYR 221
V DD DLF + R
Sbjct: 130 VPLDDDMEDLFGEAPR 145
>gi|32487835|emb|CAE05066.1| OSJNBa0094P09.5 [Oryza sativa Japonica Group]
gi|32492383|emb|CAE05129.1| OSJNBa0079F16.21 [Oryza sativa Japonica Group]
Length = 849
Score = 41.6 bits (96), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Query: 11 CFKCGRPGHWSRDCPSSSS-SAPSNSNFPSNNTASGGGGGGSG 52
CF CG+PGH +R CP AP+ S N G G GSG
Sbjct: 129 CFVCGQPGHLARKCPQRKGMKAPAGQTSKSANVTIGNTGDGSG 171
>gi|145515315|ref|XP_001443557.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124410946|emb|CAK76160.1| unnamed protein product [Paramecium tetraurelia]
Length = 186
Score = 41.6 bits (96), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 21/35 (60%), Gaps = 6/35 (17%)
Query: 1 MENAKAAPTG------CFKCGRPGHWSRDCPSSSS 29
++N K TG CFKCGR GHW+RDCP S
Sbjct: 77 VDNRKGRRTGPNESDECFKCGRGGHWARDCPKGRS 111
>gi|50878429|gb|AAT85203.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 2772
Score = 41.6 bits (96), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Query: 11 CFKCGRPGHWSRDCPSSSS-SAPSNSNFPSNNTASGGGGGGSG 52
CF CG+PGH +R CP AP+ S N G G GSG
Sbjct: 220 CFVCGQPGHLARKCPQRKGMKAPAGQTSKSANVTIGNTGDGSG 262
>gi|116309037|emb|CAH66150.1| OSIGBa0097I11.2 [Oryza sativa Indica Group]
Length = 1527
Score = 41.6 bits (96), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 9/65 (13%)
Query: 6 AAPTGCFKCGRPGHWSRDCPS----SSSSAPSNSNFPS-----NNTASGGGGGGSGVGDG 56
+ P CF CG PGH++ CP ++SAP+NSN P+ N+ A+ V G
Sbjct: 575 SKPVICFNCGDPGHYADKCPKPRRVKNASAPNNSNVPAPKARVNHVAAAEAQNAPDVVLG 634
Query: 57 GVSVS 61
V+
Sbjct: 635 TFPVN 639
>gi|116309186|emb|CAH66282.1| OSIGBa0116O04.4 [Oryza sativa Indica Group]
Length = 1527
Score = 41.6 bits (96), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 9/65 (13%)
Query: 6 AAPTGCFKCGRPGHWSRDCPS----SSSSAPSNSNFPS-----NNTASGGGGGGSGVGDG 56
+ P CF CG PGH++ CP ++SAP+NSN P+ N+ A+ V G
Sbjct: 575 SKPVICFNCGDPGHYADKCPKPRRVKNASAPNNSNVPAPKARVNHVAAAEAQNAPDVVLG 634
Query: 57 GVSVS 61
V+
Sbjct: 635 TFPVN 639
>gi|116309038|emb|CAH66151.1| OSIGBa0097I11.3 [Oryza sativa Indica Group]
Length = 1477
Score = 41.6 bits (96), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 9/65 (13%)
Query: 6 AAPTGCFKCGRPGHWSRDCPS----SSSSAPSNSNFPS-----NNTASGGGGGGSGVGDG 56
+ P CF CG PGH++ CP ++SAP+NSN P+ N+ A+ V G
Sbjct: 525 SKPVICFNCGDPGHYADKCPKPRRVKNASAPNNSNVPAPKARVNHVAAAEAQNAPDVVLG 584
Query: 57 GVSVS 61
V+
Sbjct: 585 TFPVN 589
>gi|116309187|emb|CAH66283.1| OSIGBa0116O04.5 [Oryza sativa Indica Group]
Length = 1477
Score = 41.6 bits (96), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 9/65 (13%)
Query: 6 AAPTGCFKCGRPGHWSRDCPS----SSSSAPSNSNFPS-----NNTASGGGGGGSGVGDG 56
+ P CF CG PGH++ CP ++SAP+NSN P+ N+ A+ V G
Sbjct: 525 SKPVICFNCGDPGHYADKCPKPRRVKNASAPNNSNVPAPKARVNHVAAAEAQNAPDVVLG 584
Query: 57 GVSVS 61
V+
Sbjct: 585 TFPVN 589
>gi|115461691|ref|NP_001054445.1| Os05g0111000 [Oryza sativa Japonica Group]
gi|52353639|gb|AAU44205.1| unknown protein [Oryza sativa Japonica Group]
gi|113577996|dbj|BAF16359.1| Os05g0111000 [Oryza sativa Japonica Group]
gi|222629944|gb|EEE62076.1| hypothetical protein OsJ_16860 [Oryza sativa Japonica Group]
Length = 951
Score = 41.6 bits (96), Expect = 0.32, Method: Composition-based stats.
Identities = 20/44 (45%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 11 CFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASGGGGGGSGVG 54
CFKC +PGH++RDCP S+ A + + +N AS G S VG
Sbjct: 907 CFKCKQPGHFARDCPGQSTGA-QHQTYGNNVAASRGYNRQSFVG 949
Score = 37.7 bits (86), Expect = 3.7, Method: Composition-based stats.
Identities = 13/19 (68%), Positives = 16/19 (84%)
Query: 11 CFKCGRPGHWSRDCPSSSS 29
CFKC +PGH+SRDCP S+
Sbjct: 884 CFKCKQPGHFSRDCPVQST 902
>gi|77554789|gb|ABA97585.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 401
Score = 41.2 bits (95), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 5/42 (11%)
Query: 11 CFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASGGGGGGSG 52
CF CG+PGHW++DCP +N + GGG G G
Sbjct: 365 CFVCGKPGHWAKDCPERKDKKSANMVI-----SEGGGTLGYG 401
>gi|242208424|ref|XP_002470063.1| predicted protein [Postia placenta Mad-698-R]
gi|220730963|gb|EED84813.1| predicted protein [Postia placenta Mad-698-R]
Length = 636
Score = 41.2 bits (95), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 25/33 (75%)
Query: 8 PTGCFKCGRPGHWSRDCPSSSSSAPSNSNFPSN 40
P CFKCG+ GHW+R+CP+ S++ +S+ PS+
Sbjct: 313 PGACFKCGQLGHWARECPNHLSTSRRSSHHPSD 345
>gi|50312467|ref|XP_456267.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|74604805|sp|Q6CIH2.1|CSM3_KLULA RecName: Full=Chromosome segregation in meiosis protein 3
gi|49645403|emb|CAG98975.1| KLLA0F26675p [Kluyveromyces lactis]
Length = 299
Score = 41.2 bits (95), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 35/75 (46%)
Query: 76 RSRPKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHLLPYYSF 135
+ R KLT + LLS GL +V+ H P++ + +L + + Y W +L P F
Sbjct: 58 KPRVKLTAEKLLSTKGLPYVMEHAPKSCRISKHKTAYDNLTNFLQFYQLWAHNLYPKAKF 117
Query: 136 DHFVSKVEQVAASRR 150
F S E + + +
Sbjct: 118 KDFTSLCESLGKTDK 132
>gi|363749261|ref|XP_003644848.1| hypothetical protein Ecym_2288 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888481|gb|AET38031.1| Hypothetical protein Ecym_2288 [Eremothecium cymbalariae
DBVPG#7215]
Length = 266
Score = 41.2 bits (95), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 54/122 (44%), Gaps = 7/122 (5%)
Query: 47 GGGGSGVGDGGVSVSKSAIGVKEKPKKLPRSRP--KLTPDLLLSDDGLGFVLRHFPRAFK 104
G G V D + + ++ RSR KL + L+S GL ++L++ P+ +
Sbjct: 18 GSGAGAVADASDILEGGVMDADPTTIEIKRSRTVVKLHYERLVSSKGLPYLLKNGPKYGR 77
Query: 105 YRGRGHEVSDLGHLIGLYSEWHSHLLPYYSFDHFVSKVEQVAAS----RRVKM-CIRDLR 159
R +L HL+ Y W L P F FVS +++ + R+ +M IR+
Sbjct: 78 ISKRRDTYQNLCHLLQFYQLWAHELYPKAKFKDFVSVCDRLGKTDKLLRQYRMELIREEL 137
Query: 160 DR 161
DR
Sbjct: 138 DR 139
>gi|145518856|ref|XP_001445300.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124412744|emb|CAK77903.1| unnamed protein product [Paramecium tetraurelia]
Length = 454
Score = 41.2 bits (95), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 13/19 (68%), Positives = 17/19 (89%)
Query: 11 CFKCGRPGHWSRDCPSSSS 29
CFKCG+ GHW+R+CP+ SS
Sbjct: 93 CFKCGKGGHWARECPNRSS 111
>gi|440798456|gb|ELR19524.1| replication fork protection component swi3 protein [Acanthamoeba
castellanii str. Neff]
Length = 553
Score = 41.2 bits (95), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 31/65 (47%)
Query: 84 DLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHLLPYYSFDHFVSKVE 143
+LL +GL + FK + + LI Y EW L+P Y+FD F+ + E
Sbjct: 85 ELLSQPEGLPALYDRLKSGFKIDESLPLIDQMEQLITPYREWAKDLMPNYTFDDFIERTE 144
Query: 144 QVAAS 148
+++ +
Sbjct: 145 KLSGT 149
>gi|328863855|gb|EGG12954.1| hypothetical protein MELLADRAFT_76389 [Melampsora larici-populina
98AG31]
Length = 462
Score = 41.2 bits (95), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 62/156 (39%), Gaps = 16/156 (10%)
Query: 44 SGGGGGGSGVGDGGVSVSKSAIGVKEKPKKLPRSRPKLTPDLLLS-DDGLGFVLRHFPRA 102
SG G GDG S ++ R KL D LL+ DG ++ +A
Sbjct: 77 SGDDPLAGGDGDGTKST------------RIRRPTVKLDEDRLLNHPDGFQKLI-PLAKA 123
Query: 103 FKYRGRGHEVSDLGHLIGLYSEWHSHLLPYYSFDHFVSKVEQVAASRRVKMCIRDLRDRV 162
FK +G E DLG ++ +Y W L P F + +E++ R ++ + + R
Sbjct: 124 FKAGPKGSEKEDLGRVLKMYRMWAHLLYPKAKFRDAIDTIEKLCHKRPLQSALNEWRGEA 183
Query: 163 ANGGDPTKL--HEAAVEHDGPVDEQAPAEAMSSERQ 196
K +E V+ D V+ P + +S Q
Sbjct: 184 FQSSKKRKTTSNEVQVDKDSAVERVEPTQQPASPNQ 219
>gi|21954079|gb|AAK92787.2| putative RNA binding protein [Arabidopsis thaliana]
Length = 182
Score = 41.2 bits (95), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 15/23 (65%), Positives = 17/23 (73%)
Query: 5 KAAPTGCFKCGRPGHWSRDCPSS 27
K CFKC RPGHW+RDCPS+
Sbjct: 1 KGTEDECFKCRRPGHWARDCPST 23
>gi|98986202|dbj|BAE94497.1| Vasa [Polyandrocarpa misakiensis]
Length = 705
Score = 41.2 bits (95), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 20/27 (74%)
Query: 11 CFKCGRPGHWSRDCPSSSSSAPSNSNF 37
CFKCG GH SRDCPS++S+ S + F
Sbjct: 97 CFKCGEEGHMSRDCPSNTSTGSSKACF 123
>gi|383866069|ref|XP_003708494.1| PREDICTED: ATP-dependent DNA helicase Q4-like [Megachile rotundata]
Length = 1494
Score = 41.2 bits (95), Expect = 0.41, Method: Composition-based stats.
Identities = 15/25 (60%), Positives = 18/25 (72%)
Query: 5 KAAPTGCFKCGRPGHWSRDCPSSSS 29
K T CFKCG GH+SR+CP+S S
Sbjct: 647 KKGTTSCFKCGEAGHFSRNCPNSKS 671
>gi|242032759|ref|XP_002463774.1| hypothetical protein SORBIDRAFT_01g005940 [Sorghum bicolor]
gi|241917628|gb|EER90772.1| hypothetical protein SORBIDRAFT_01g005940 [Sorghum bicolor]
Length = 366
Score = 41.2 bits (95), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 14/22 (63%), Positives = 18/22 (81%)
Query: 4 AKAAPTGCFKCGRPGHWSRDCP 25
+ ++P C+ CGRPGHWSRDCP
Sbjct: 314 SSSSPGACYNCGRPGHWSRDCP 335
Score = 40.8 bits (94), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 16/24 (66%), Positives = 18/24 (75%)
Query: 4 AKAAPTGCFKCGRPGHWSRDCPSS 27
A+ A CFKCG PGHW+RDCP S
Sbjct: 89 AQVASGACFKCGDPGHWARDCPQS 112
>gi|145487644|ref|XP_001429827.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124396921|emb|CAK62429.1| unnamed protein product [Paramecium tetraurelia]
Length = 235
Score = 41.2 bits (95), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 31/55 (56%)
Query: 105 YRGRGHEVSDLGHLIGLYSEWHSHLLPYYSFDHFVSKVEQVAASRRVKMCIRDLR 159
YR E+ +L + + EWH ++P Y FD+F +++++ + V+ ++ LR
Sbjct: 41 YRFGNDELDELNKYMHVIEEWHYQIMPKYDFDYFTNRLQKFGGNNSVQTHLQFLR 95
>gi|403420067|emb|CCM06767.1| predicted protein [Fibroporia radiculosa]
Length = 285
Score = 41.2 bits (95), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 4/40 (10%)
Query: 11 CFKCGRPGHWSRDCPSS----SSSAPSNSNFPSNNTASGG 46
C+ CG+PGHW R CP+ S+ P+ +N SN S G
Sbjct: 153 CYICGKPGHWGRTCPNKKTGDSAVKPAAANMTSNTGVSKG 192
>gi|432888898|ref|XP_004075077.1| PREDICTED: RNA-binding protein 4.1-like [Oryzias latipes]
Length = 417
Score = 40.8 bits (94), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 25/41 (60%)
Query: 9 TGCFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASGGGGG 49
+GC++CG+ GHWS++CP + N + P + + G GG
Sbjct: 158 SGCYRCGQEGHWSKECPLDQNGFQRNGSEPKSEYDASGFGG 198
>gi|218193864|gb|EEC76291.1| hypothetical protein OsI_13802 [Oryza sativa Indica Group]
Length = 384
Score = 40.8 bits (94), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 14/22 (63%), Positives = 19/22 (86%)
Query: 6 AAPTGCFKCGRPGHWSRDCPSS 27
++P CFKCG+ GHWSRDCP++
Sbjct: 338 SSPDACFKCGKSGHWSRDCPTA 359
>gi|410906771|ref|XP_003966865.1| PREDICTED: RNA-binding protein 4.1-like [Takifugu rubripes]
Length = 416
Score = 40.8 bits (94), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 22/31 (70%)
Query: 9 TGCFKCGRPGHWSRDCPSSSSSAPSNSNFPS 39
+GC++CG+ GHWS++CP + P N + P+
Sbjct: 158 SGCYRCGQEGHWSKECPLDQNGHPRNGSEPN 188
>gi|226502290|ref|NP_001150604.1| glycine-rich RNA-binding protein 7 [Zea mays]
gi|195640520|gb|ACG39728.1| glycine-rich RNA-binding protein 7 [Zea mays]
gi|414591943|tpg|DAA42514.1| TPA: glycine-rich RNA-binding protein 7 [Zea mays]
Length = 316
Score = 40.8 bits (94), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 20/30 (66%)
Query: 11 CFKCGRPGHWSRDCPSSSSSAPSNSNFPSN 40
CFKCGR GHW+R+CP S S + P++
Sbjct: 142 CFKCGRSGHWARECPYSDGSGRTGRYSPAS 171
>gi|108864385|gb|ABG22485.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1132
Score = 40.8 bits (94), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Query: 11 CFKCGRPGHWSRDCPSSS-SSAPSNSNFPSNNTASGGGGGGSGVGDGG 57
CF CG+PGH +R CP P++ S N G G SG G G
Sbjct: 219 CFVCGQPGHLARKCPQRKGMKTPTSQTSKSANVTIGNTGDRSGYGRTG 266
>gi|145504208|ref|XP_001438076.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124405237|emb|CAK70679.1| unnamed protein product [Paramecium tetraurelia]
Length = 266
Score = 40.8 bits (94), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 34/65 (52%)
Query: 95 VLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHLLPYYSFDHFVSKVEQVAASRRVKMC 154
VL F YR E+ +L + + EWH ++P Y FD+F +++++ + V+
Sbjct: 63 VLFLFNLCKDYRFGNDELDELNKYMHVIEEWHYQVMPKYDFDYFTNRLQKFGGNNSVQTH 122
Query: 155 IRDLR 159
++ LR
Sbjct: 123 LQFLR 127
>gi|156058656|ref|XP_001595251.1| hypothetical protein SS1G_03340 [Sclerotinia sclerotiorum 1980]
gi|154701127|gb|EDO00866.1| hypothetical protein SS1G_03340 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 907
Score = 40.8 bits (94), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 34/68 (50%)
Query: 6 AAPTGCFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASGGGGGGSGVGDGGVSVSKSAI 65
+AP CFKC + GH+S+ CP+S PS + ++ S + V+++
Sbjct: 294 SAPAVCFKCRQTGHYSKQCPNSRKGKPSEWDLDQHDCTSVNQDKKQPWDNTERQVAENKK 353
Query: 66 GVKEKPKK 73
VKE+ KK
Sbjct: 354 LVKERRKK 361
>gi|390604021|gb|EIN13412.1| hypothetical protein PUNSTDRAFT_139962 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 521
Score = 40.8 bits (94), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 24/44 (54%), Gaps = 8/44 (18%)
Query: 5 KAAPTGCFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASGGGG 48
++ P CFKCG+ GHW+R+CP NS PS G GG
Sbjct: 160 QSEPGACFKCGQLGHWARECP--------NSGPPSRRGPHGAGG 195
>gi|156349371|ref|XP_001622030.1| hypothetical protein NEMVEDRAFT_v1g248588 [Nematostella vectensis]
gi|156208427|gb|EDO29930.1| predicted protein [Nematostella vectensis]
Length = 278
Score = 40.8 bits (94), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 18/28 (64%)
Query: 5 KAAPTGCFKCGRPGHWSRDCPSSSSSAP 32
K A CF CG+ GHW+RDCP SS P
Sbjct: 125 KPAEDECFHCGKCGHWARDCPKRSSYQP 152
>gi|116309189|emb|CAH66284.1| OSIGBa0161P06.1 [Oryza sativa Indica Group]
Length = 1665
Score = 40.8 bits (94), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 9/65 (13%)
Query: 6 AAPTGCFKCGRPGHWSRDCPS----SSSSAPSNSNFPS-----NNTASGGGGGGSGVGDG 56
+ P CF CG PGH++ CP S+SAP+NS+ P+ N+ A+ V G
Sbjct: 499 SKPVICFNCGDPGHYADKCPKPRRVKSASAPNNSSVPASKARVNHVAAAEAQNAPDVVLG 558
Query: 57 GVSVS 61
V+
Sbjct: 559 TFPVN 563
>gi|108705854|gb|ABF93649.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1269
Score = 40.8 bits (94), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 7/44 (15%)
Query: 11 CFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASGGGGGGSGVG 54
CF CG+ GHW++DC P + S N GGG SG G
Sbjct: 302 CFVCGKSGHWAKDC-------PERKDRKSANMVISEGGGTSGYG 338
>gi|62734178|gb|AAX96287.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
sativa Japonica Group]
gi|62734227|gb|AAX96336.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
sativa Japonica Group]
gi|77549796|gb|ABA92593.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1099
Score = 40.8 bits (94), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 7/44 (15%)
Query: 11 CFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASGGGGGGSGVG 54
CF CG+ GHW++DC P + S N GGG SG G
Sbjct: 380 CFVCGKSGHWAKDC-------PERKDRKSANMVISEGGGTSGYG 416
>gi|115455777|ref|NP_001051489.1| Os03g0786500 [Oryza sativa Japonica Group]
gi|50355715|gb|AAT75240.1| putative DNA-binding protein [Oryza sativa Japonica Group]
gi|108711439|gb|ABF99234.1| GRF zinc finger family protein, expressed [Oryza sativa Japonica
Group]
gi|113549960|dbj|BAF13403.1| Os03g0786500 [Oryza sativa Japonica Group]
gi|215741242|dbj|BAG97737.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222625927|gb|EEE60059.1| hypothetical protein OsJ_12863 [Oryza sativa Japonica Group]
Length = 384
Score = 40.8 bits (94), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 14/22 (63%), Positives = 19/22 (86%)
Query: 6 AAPTGCFKCGRPGHWSRDCPSS 27
++P CFKCG+ GHWSRDCP++
Sbjct: 338 SSPDACFKCGKSGHWSRDCPTA 359
>gi|116309544|emb|CAH66607.1| H0211A12.10 [Oryza sativa Indica Group]
Length = 1200
Score = 40.8 bits (94), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 7/44 (15%)
Query: 11 CFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASGGGGGGSGVG 54
CF CG+ GHW++DC P + S N GGG SG G
Sbjct: 362 CFVCGKSGHWAKDC-------PERKDRKSANMVISEGGGTSGYG 398
>gi|55167998|gb|AAV43866.1| putative polyprotein [Oryza sativa Japonica Group]
gi|55168291|gb|AAV44157.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1046
Score = 40.8 bits (94), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Query: 11 CFKCGRPGHWSRDCPS-SSSSAPSNSNFPSNNTASGGGGGGSGVG 54
CF CG+PG+ +R CP AP+ S N G G GSG G
Sbjct: 106 CFVCGQPGYLARKCPQHKGMKAPAGQTSKSANVTIGNTGDGSGYG 150
>gi|108707163|gb|ABF94958.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1104
Score = 40.8 bits (94), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 7/44 (15%)
Query: 11 CFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASGGGGGGSGVG 54
CF CG+ GHW++DC P + S N GGG SG G
Sbjct: 374 CFVCGKSGHWAKDC-------PERKDRKSANMVISEGGGTSGYG 410
>gi|17647581|ref|NP_523957.1| lark, isoform A [Drosophila melanogaster]
gi|24659966|ref|NP_729237.1| lark, isoform B [Drosophila melanogaster]
gi|24659971|ref|NP_729238.1| lark, isoform C [Drosophila melanogaster]
gi|24659976|ref|NP_729239.1| lark, isoform D [Drosophila melanogaster]
gi|24659981|ref|NP_729240.1| lark, isoform E [Drosophila melanogaster]
gi|62510825|sp|Q94901.1|LARK_DROME RecName: Full=RNA-binding protein lark
gi|1518654|gb|AAB07067.1| RNA-binding protein lark [Drosophila melanogaster]
gi|7295256|gb|AAF50578.1| lark, isoform A [Drosophila melanogaster]
gi|16769574|gb|AAL29006.1| LD40792p [Drosophila melanogaster]
gi|23094008|gb|AAN12053.1| lark, isoform B [Drosophila melanogaster]
gi|23094009|gb|AAN12054.1| lark, isoform C [Drosophila melanogaster]
gi|23094010|gb|AAN12055.1| lark, isoform D [Drosophila melanogaster]
gi|23094011|gb|AAN12056.1| lark, isoform E [Drosophila melanogaster]
gi|220946850|gb|ACL85968.1| lark-PA [synthetic construct]
gi|220956448|gb|ACL90767.1| lark-PA [synthetic construct]
Length = 352
Score = 40.8 bits (94), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 22/38 (57%)
Query: 8 PTGCFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASG 45
P C++CGR GHWS++CP SA PS +A G
Sbjct: 167 PEQCYRCGRSGHWSKECPRLYGSAGGGREPPSPLSAGG 204
>gi|116311090|emb|CAH68019.1| H0807C06-H0308C08.6 [Oryza sativa Indica Group]
Length = 1260
Score = 40.8 bits (94), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 9/65 (13%)
Query: 6 AAPTGCFKCGRPGHWSRDCPS----SSSSAPSNSNFPS-----NNTASGGGGGGSGVGDG 56
+ P CF CG PGH++ CP ++ AP+NSN P+ N+ A+ V G
Sbjct: 177 SKPVVCFNCGDPGHYADKCPKPRRVKNAPAPNNSNVPAPKARVNHVAAAEAQNAPDVVLG 236
Query: 57 GVSVS 61
V+
Sbjct: 237 TFPVN 241
>gi|77550728|gb|ABA93525.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1235
Score = 40.8 bits (94), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Query: 11 CFKCGRPGHWSRDCPSSSS-SAPSNSNFPSNNTASGGGGGGSGVGDGG 57
CF CG+ GH +R CP AP+ S N G G GSG G G
Sbjct: 242 CFVCGQVGHLARKCPQRKGMKAPAGQTSKSANVTIGNTGDGSGYGRTG 289
>gi|342887092|gb|EGU86722.1| hypothetical protein FOXB_02731 [Fusarium oxysporum Fo5176]
Length = 294
Score = 40.8 bits (94), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 50/114 (43%), Gaps = 13/114 (11%)
Query: 63 SAIGVKEKPKKLPRSRP---KLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHE---VSDLG 116
S +G+ E+ R+R KL + LL G+ LR + K +G+GHE SD
Sbjct: 42 SGLGIDEEVDVKKRARVPNVKLDEERLLGPKGIP-KLRQRAKDLKIKGKGHESVQFSDAS 100
Query: 117 HLIGLYSEWHSHLLPYYSFDHFVSKVEQVAASRRVKMCIRDL------RDRVAN 164
L+ Y W L P F ++ VE+ +RV + D +DR A+
Sbjct: 101 RLLSFYQLWLDDLFPKAKFLDALTMVEKAGHKKRVMIARNDYINESKPKDRTAD 154
>gi|77551169|gb|ABA93966.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1212
Score = 40.8 bits (94), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Query: 11 CFKCGRPGHWSRDCPSSSS-SAPSNSNFPSNNTASGGGGGGSG 52
CF CG+PGH +R CP AP+ + S N G GSG
Sbjct: 242 CFVCGQPGHLARKCPQRKGMKAPARQTYKSANVTIDNIGDGSG 284
>gi|38347189|emb|CAD37106.2| OSJNBa0024J22.17 [Oryza sativa Japonica Group]
Length = 1200
Score = 40.8 bits (94), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 7/44 (15%)
Query: 11 CFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASGGGGGGSGVG 54
CF CG+ GHW++DC P + S N GGG SG G
Sbjct: 362 CFVCGKSGHWAKDC-------PERKDRKSANMVISEGGGTSGYG 398
>gi|323457142|gb|EGB13008.1| expressed protein [Aureococcus anophagefferens]
Length = 218
Score = 40.8 bits (94), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 13/20 (65%), Positives = 16/20 (80%)
Query: 11 CFKCGRPGHWSRDCPSSSSS 30
CF+CG GHWSRDCP S+ +
Sbjct: 156 CFRCGEKGHWSRDCPQSAKN 175
>gi|62511030|sp|Q6IQ97.1|RBM41_DANRE RecName: Full=RNA-binding protein 4.1; AltName: Full=RNA-binding
motif protein 4.1
gi|47940417|gb|AAH71513.1| RNA binding motif protein 4.1 [Danio rerio]
gi|160774000|gb|AAI55176.1| RNA binding motif protein 4.1 [Danio rerio]
Length = 419
Score = 40.8 bits (94), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 25/45 (55%), Gaps = 4/45 (8%)
Query: 9 TGCFKCGRPGHWSRDCP----SSSSSAPSNSNFPSNNTASGGGGG 49
TGC++CG+ GHWS++CP S PS+ F SGG G
Sbjct: 160 TGCYRCGQEGHWSKECPLDQNGSYREGPSSEGFGPVRFDSGGDRG 204
>gi|16905175|gb|AAL31045.1|AC078893_8 putative polyprotein [Oryza sativa Japonica Group]
Length = 1280
Score = 40.4 bits (93), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 21/44 (47%), Gaps = 7/44 (15%)
Query: 11 CFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASGGGGGGSGVG 54
CF CG+ GHW++DCP S N GGG SG G
Sbjct: 326 CFVCGKSGHWAKDCPECKDRK-------SANMVISEGGGTSGYG 362
>gi|41054387|ref|NP_955999.1| RNA-binding protein 4.1 [Danio rerio]
gi|28277979|gb|AAH46057.1| RNA binding motif protein 4.1 [Danio rerio]
Length = 419
Score = 40.4 bits (93), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 25/45 (55%), Gaps = 4/45 (8%)
Query: 9 TGCFKCGRPGHWSRDCP----SSSSSAPSNSNFPSNNTASGGGGG 49
TGC++CG+ GHWS++CP S PS+ F SGG G
Sbjct: 160 TGCYRCGQEGHWSKECPLDQNGSYREGPSSEGFGPVRFDSGGDRG 204
>gi|108862423|gb|ABA96959.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 920
Score = 40.4 bits (93), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 7/44 (15%)
Query: 11 CFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASGGGGGGSGVG 54
CF CG+ GHW++DC P + S N GGG SG G
Sbjct: 131 CFVCGKSGHWAKDC-------PERKDRKSANMVISEGGGTSGYG 167
>gi|110289248|gb|ABB47787.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1288
Score = 40.4 bits (93), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 21/44 (47%), Gaps = 7/44 (15%)
Query: 11 CFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASGGGGGGSGVG 54
CF CG+ GHW++DCP S N GGG SG G
Sbjct: 326 CFVCGKSGHWAKDCPECKDRK-------SANMVISEGGGTSGYG 362
>gi|77550993|gb|ABA93790.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1370
Score = 40.4 bits (93), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 36/88 (40%), Gaps = 2/88 (2%)
Query: 11 CFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASGGGGGGS--GVGDGGVSVSKSAIGVK 68
CF CG+ GHW++DCP +N ++ G + GVG + + I
Sbjct: 365 CFMCGKSGHWAKDCPELKDKKSANMVGRGSSLLMGNRSLAAVHGVGTVDLKFTSRKIVQL 424
Query: 69 EKPKKLPRSRPKLTPDLLLSDDGLGFVL 96
+ + +P + L LL DG V
Sbjct: 425 KNVQHVPSIKKNLVSGSLLCRDGFRLVF 452
>gi|449449318|ref|XP_004142412.1| PREDICTED: uncharacterized protein LOC101202917 [Cucumis sativus]
gi|449487254|ref|XP_004157539.1| PREDICTED: uncharacterized protein LOC101231083 [Cucumis sativus]
Length = 286
Score = 40.4 bits (93), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 14/16 (87%), Positives = 15/16 (93%)
Query: 11 CFKCGRPGHWSRDCPS 26
CFKCGR GHW+RDCPS
Sbjct: 123 CFKCGRLGHWARDCPS 138
>gi|74835178|dbj|BAE44472.1| Vasa [Botryllus primigenus]
Length = 687
Score = 40.4 bits (93), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 26/55 (47%), Gaps = 7/55 (12%)
Query: 8 PTGCFKCGRPGHWSRDCPSSSSSAPSNSNFP-------SNNTASGGGGGGSGVGD 55
P GCFKCG GH SRDCP+ + F S + +GG GG GD
Sbjct: 101 PKGCFKCGEEGHMSRDCPNGGGDSRPKGCFKCGEEGHMSRDCPNGGEGGSRSQGD 155
Score = 38.5 bits (88), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 14/19 (73%), Positives = 15/19 (78%)
Query: 8 PTGCFKCGRPGHWSRDCPS 26
P GCFKCG GH SRDCP+
Sbjct: 76 PKGCFKCGEEGHMSRDCPN 94
>gi|77557017|gb|ABA99813.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1448
Score = 40.4 bits (93), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 7/44 (15%)
Query: 11 CFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASGGGGGGSGVG 54
CF CG+ GHW++DC P + S N GGG SG G
Sbjct: 394 CFVCGKSGHWAKDC-------PERKDRKSANMVISEGGGTSGYG 430
>gi|20177638|gb|AAM14693.1|AC097446_22 Putative polyprotein [Oryza sativa Japonica Group]
gi|110288622|gb|ABB46770.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1630
Score = 40.4 bits (93), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 9/65 (13%)
Query: 6 AAPTGCFKCGRPGHWSRDCPS----SSSSAPSNSNFPS-----NNTASGGGGGGSGVGDG 56
+ P CF CG PGH++ CP ++ AP+NSN P+ N+ A+ V G
Sbjct: 540 SKPVVCFNCGDPGHYADKCPKPRRVKNAPAPNNSNVPAPKARVNHVAAAEAQNAPDVVLG 599
Query: 57 GVSVS 61
V+
Sbjct: 600 TFPVN 604
>gi|443708919|gb|ELU03829.1| hypothetical protein CAPTEDRAFT_205803 [Capitella teleta]
Length = 421
Score = 40.4 bits (93), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 19/23 (82%)
Query: 10 GCFKCGRPGHWSRDCPSSSSSAP 32
CF+CG+PGH+SR+C + ++S P
Sbjct: 341 SCFRCGKPGHFSRECRTKNTSVP 363
>gi|116309702|emb|CAH66749.1| H0409D10.7 [Oryza sativa Indica Group]
Length = 1641
Score = 40.4 bits (93), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 4/38 (10%)
Query: 6 AAPTGCFKCGRPGHWSRDCPS----SSSSAPSNSNFPS 39
+ P CF CG PGH++ CP ++ AP+NSN P+
Sbjct: 537 SKPVICFNCGDPGHYADKCPKPRRVKNAQAPNNSNVPA 574
>gi|77556338|gb|ABA99134.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1083
Score = 40.4 bits (93), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 20/37 (54%)
Query: 11 CFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASGGG 47
CF CG+PGHW+++CP +N + SG G
Sbjct: 203 CFVCGKPGHWAKNCPDRKDKKSANMVISESGGTSGYG 239
>gi|38344663|emb|CAE02325.2| OSJNBb0112E13.7 [Oryza sativa Japonica Group]
Length = 1342
Score = 40.4 bits (93), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 11 CFKCGRPGHWSRDCPSSSS-SAPSNSNFPSNNTASGGGGGGSGVGD 55
CF CG+ GH +R CP AP+ S N G G GSG G+
Sbjct: 242 CFVCGQVGHLARKCPQRKGMKAPAGQTSKSANVTIGNTGDGSGYGN 287
>gi|57900690|gb|AAW57815.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1109
Score = 40.4 bits (93), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Query: 11 CFKCGRPGHWSRDC-PSSSSSAPSNSNFPSNNTASGGGGGGSGVGDGGVSV 60
CF CG+PGH +R C AP+ +N G G GSG G G +V
Sbjct: 242 CFVCGQPGHLARKCLQRMGMKAPAGQTSKFDNVTIGSTGDGSGYGRRGSTV 292
>gi|41393211|gb|AAS01934.1| putative Integrase core domain containing protein [Oryza sativa
Japonica Group]
Length = 1180
Score = 40.4 bits (93), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 11 CFKCGRPGHWSRDCPSSSS-SAPSNSNFPSNNTASGGGGGGSGVGD 55
CF CG+ GH +R CP AP+ S N G G GSG G+
Sbjct: 202 CFVCGQVGHLARKCPQRKGMKAPAGQTSKSANVTIGNTGDGSGYGN 247
>gi|77553430|gb|ABA96226.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 975
Score = 40.4 bits (93), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 7/44 (15%)
Query: 11 CFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASGGGGGGSGVG 54
CF CG+ GHW++DC P + S N GGG SG G
Sbjct: 214 CFVCGKSGHWAKDC-------PERKDRKSANMVISEGGGTSGYG 250
>gi|68611257|emb|CAE01619.3| OSJNBa0042L16.8 [Oryza sativa Japonica Group]
Length = 1110
Score = 40.4 bits (93), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 7/44 (15%)
Query: 11 CFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASGGGGGGSGVG 54
CF CG+ GHW++DC P + S N GGG SG G
Sbjct: 340 CFVCGKSGHWAKDC-------PERKDRKSANMVISEGGGTSGYG 376
>gi|403218600|emb|CCK73090.1| hypothetical protein KNAG_0M02370 [Kazachstania naganishii CBS
8797]
Length = 242
Score = 40.4 bits (93), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 41/89 (46%), Gaps = 6/89 (6%)
Query: 76 RSRPKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLIGLYSEWHSHLLPYYSF 135
R + KLT + L+ D GL ++++H P+ R +L ++ +Y W L P +F
Sbjct: 54 RVQVKLTAERLMGDRGLPYLMQHAPQRLHISKRRSAQQNLSSIVNVYQLWAHDLYPKANF 113
Query: 136 DHFVS------KVEQVAASRRVKMCIRDL 158
F+ K ++V R + R++
Sbjct: 114 KDFLKLCHTLGKSDKVLREYRTNLVKREM 142
>gi|116317837|emb|CAH65871.1| OSIGBa0103I21.4 [Oryza sativa Indica Group]
Length = 964
Score = 40.4 bits (93), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 21/42 (50%), Gaps = 7/42 (16%)
Query: 11 CFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASGGGGGGSG 52
CF CG+PGHW+++CP S N GGG SG
Sbjct: 216 CFVCGKPGHWAKNCPDRKDKK-------SANMVISEGGGTSG 250
>gi|108709158|gb|ABF96953.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1197
Score = 40.4 bits (93), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 11 CFKCGRPGHWSRDCPSSSS-SAPSNSNFPSNNTASGGGGGGSGVGD 55
CF CG+ GH +R CP AP+ S N G G GSG G+
Sbjct: 213 CFVCGQVGHLARKCPQRKGMKAPAGQTSKSANVTIGNTGDGSGYGN 258
>gi|116308884|emb|CAH66018.1| OSIGBa0105N24.2 [Oryza sativa Indica Group]
Length = 1608
Score = 40.4 bits (93), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 9/65 (13%)
Query: 6 AAPTGCFKCGRPGHWSRDCPS----SSSSAPSNSNFPS-----NNTASGGGGGGSGVGDG 56
+ P CF CG PGH++ CP ++ AP+NSN P+ N+ A+ V G
Sbjct: 484 SKPVVCFNCGDPGHYADKCPKPRRVKNAPAPNNSNIPAPKARVNHVAAAEAQNAPDVVLG 543
Query: 57 GVSVS 61
V+
Sbjct: 544 TFPVN 548
>gi|29027729|dbj|BAC65862.1| hypothetical polyprotein [Oryza sativa Japonica Group]
Length = 1268
Score = 40.4 bits (93), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 19/37 (51%)
Query: 11 CFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASGGG 47
CF CG+PGHW++DCP +N + G G
Sbjct: 215 CFVCGKPGHWAKDCPERKDKKSANMVISEDGGTLGYG 251
>gi|77557040|gb|ABA99836.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1302
Score = 40.4 bits (93), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 11 CFKCGRPGHWSRDCPSSSS-SAPSNSNFPSNNTASGGGGGGSGVGD 55
CF CG+ GH +R CP AP+ S N G G GSG G+
Sbjct: 242 CFVCGQVGHLARKCPQRKGMKAPAGQTSKSANVTIGNTGDGSGYGN 287
>gi|38344873|emb|CAE01299.2| OSJNBa0020P07.16 [Oryza sativa Japonica Group]
Length = 1314
Score = 40.4 bits (93), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 11 CFKCGRPGHWSRDCPSSSS-SAPSNSNFPSNNTASGGGGGGSGVGD 55
CF CG+ GH +R CP AP+ S N G G GSG G+
Sbjct: 214 CFVCGQVGHLARKCPQRKGMKAPAGQTSKSANVTIGNTGDGSGYGN 259
>gi|38346634|emb|CAD40744.2| OSJNBa0072D21.4 [Oryza sativa Japonica Group]
Length = 1319
Score = 40.4 bits (93), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 11 CFKCGRPGHWSRDCPSSSS-SAPSNSNFPSNNTASGGGGGGSGVGD 55
CF CG+ GH +R CP AP+ S N G G GSG G+
Sbjct: 242 CFVCGQVGHLARKCPQRKGMKAPAGQTSKSANVTIGNTGDGSGYGN 287
>gi|402220870|gb|EJU00940.1| hypothetical protein DACRYDRAFT_108285 [Dacryopinax sp. DJM-731
SS1]
Length = 491
Score = 40.0 bits (92), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 19/25 (76%)
Query: 8 PTGCFKCGRPGHWSRDCPSSSSSAP 32
P CFKCG+ GHW+R+CP+ +S P
Sbjct: 149 PGACFKCGQHGHWARECPNGGTSIP 173
>gi|49328150|gb|AAT58846.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1229
Score = 40.0 bits (92), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 11 CFKCGRPGHWSRDCPSSSS-SAPSNSNFPSNNTASGGGGGGSGVGD 55
CF CG+ GH +R CP AP+ S N G G GSG G+
Sbjct: 242 CFVCGQVGHLARKCPQRKGMKAPAGQTSKSANVTIGNTGDGSGYGN 287
>gi|38346946|emb|CAE04807.2| OSJNBb0022P19.2 [Oryza sativa Japonica Group]
Length = 1099
Score = 40.0 bits (92), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 7/44 (15%)
Query: 11 CFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASGGGGGGSGVG 54
CF CG+ GHW++DC P + S N GGG SG G
Sbjct: 317 CFVCGKSGHWAKDC-------PERKDRKSANMVISEGGGTSGYG 353
>gi|13937286|gb|AAK50117.1|AC087797_2 putative gag-pol polyprotein [Oryza sativa Japonica Group]
Length = 1198
Score = 40.0 bits (92), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Query: 11 CFKCGRPGHWSRDCPSSSS-SAPSNSNFPSNNTASGGGGGGSGVGDGG 57
CF CG+ GH +R CP AP+ S N G G GSG G G
Sbjct: 242 CFVCGQVGHLARKCPQRKGMKAPAGQTSKSANVTIGNTGDGSGYGRTG 289
>gi|110289378|gb|ABB47865.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1126
Score = 40.0 bits (92), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 7/44 (15%)
Query: 11 CFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASGGGGGGSGVG 54
CF CG+ GHW++DC P + S N GGG SG G
Sbjct: 214 CFVCGKSGHWAKDC-------PERKDRKSANMIISEGGGTSGYG 250
>gi|53980940|gb|AAU44026.2| putative polyprotein [Oryza sativa Japonica Group]
Length = 1391
Score = 40.0 bits (92), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 11 CFKCGRPGHWSRDCPSSSS-SAPSNSNFPSNNTASGGGGGGSGVGD 55
CF CG+ GH +R CP AP+ S N G G GSG G+
Sbjct: 331 CFVCGQVGHLARKCPQRKGMKAPAGQTSKSANVTIGNTGDGSGYGN 376
>gi|78708356|gb|ABB47331.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1022
Score = 40.0 bits (92), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 16/24 (66%)
Query: 11 CFKCGRPGHWSRDCPSSSSSAPSN 34
CF CG+PGHW++DCP +N
Sbjct: 280 CFVCGKPGHWAKDCPERKDKKSAN 303
>gi|242117582|dbj|BAH80065.1| putative retrotransposon protein [Oryza sativa Indica Group]
Length = 821
Score = 40.0 bits (92), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 9/65 (13%)
Query: 6 AAPTGCFKCGRPGHWSRDCPS----SSSSAPSNSNFPS-----NNTASGGGGGGSGVGDG 56
+ P CF CG PGH++ CP ++ AP+NSN P+ N+ A+ V G
Sbjct: 106 SKPVVCFNCGDPGHYADKCPKPRRVKNAPAPNNSNVPAPKARVNHVAAAEAQNAPDVVLG 165
Query: 57 GVSVS 61
V+
Sbjct: 166 TFPVN 170
>gi|108710670|gb|ABF98465.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1210
Score = 40.0 bits (92), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Query: 11 CFKCGRPGHWSRDCPSSSS-SAPSNSNFPSNNTASGGGGGGSGVGDGG 57
CF CG+ GH +R CP AP+ S N G G GSG G G
Sbjct: 242 CFVCGQVGHLARKCPQRKGMKAPAGQTSKSANVTIGNTGDGSGYGRTG 289
>gi|108708907|gb|ABF96702.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1518
Score = 40.0 bits (92), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 11 CFKCGRPGHWSRDCPSSSS-SAPSNSNFPSNNTASGGGGGGSGVGD 55
CF CG+ GH +R CP AP+ S N G G GSG G+
Sbjct: 458 CFVCGQVGHLARKCPQRKGMKAPAGQTSKSANVTIGNTGDGSGYGN 503
>gi|52353525|gb|AAU44091.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1117
Score = 40.0 bits (92), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 20/37 (54%)
Query: 11 CFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASGGG 47
CF CG+PGHW+++CP +N + SG G
Sbjct: 304 CFVCGKPGHWAKNCPDRKDKKSANMVISESGGTSGYG 340
>gi|22324949|gb|AAM95676.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1138
Score = 40.0 bits (92), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 7/44 (15%)
Query: 11 CFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASGGGGGGSGVG 54
CF CG+ GHW++DC P + S N GGG SG G
Sbjct: 214 CFVCGKSGHWAKDC-------PERKDRKSANMIISEGGGTSGYG 250
>gi|77553454|gb|ABA96250.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1287
Score = 40.0 bits (92), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 21/44 (47%), Gaps = 7/44 (15%)
Query: 11 CFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASGGGGGGSGVG 54
CF CG+ GHW++DCP S N GGG SG G
Sbjct: 359 CFVCGKSGHWAKDCPERKDK-------KSANMIISEGGGTSGYG 395
>gi|62734114|gb|AAX96223.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
sativa Japonica Group]
gi|77549882|gb|ABA92679.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1302
Score = 40.0 bits (92), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 11 CFKCGRPGHWSRDCPSSSS-SAPSNSNFPSNNTASGGGGGGSGVGD 55
CF CG+ GH +R CP AP+ S N G G GSG G+
Sbjct: 242 CFVCGQVGHLARKCPQRKGMKAPAGQTSKSANVTIGNTGDGSGYGN 287
>gi|38346534|emb|CAE04541.2| OSJNBa0040D17.9 [Oryza sativa Japonica Group]
Length = 1319
Score = 40.0 bits (92), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 11 CFKCGRPGHWSRDCPSSSS-SAPSNSNFPSNNTASGGGGGGSGVGD 55
CF CG+ GH +R CP AP+ S N G G GSG G+
Sbjct: 242 CFVCGQVGHLARKCPQRKGMKAPAGQTSKSANVTIGNTGDGSGYGN 287
>gi|77554328|gb|ABA97124.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1453
Score = 40.0 bits (92), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 7/44 (15%)
Query: 11 CFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASGGGGGGSGVG 54
CF CG+ GHW++DC P + S N GGG SG G
Sbjct: 399 CFVCGKSGHWAKDC-------PERKDRKSANMIISEGGGTSGYG 435
>gi|30089754|gb|AAP20858.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
sativa Japonica Group]
Length = 1302
Score = 40.0 bits (92), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 11 CFKCGRPGHWSRDCPSSSS-SAPSNSNFPSNNTASGGGGGGSGVGD 55
CF CG+ GH +R CP AP+ S N G G GSG G+
Sbjct: 242 CFVCGQVGHLARKCPQRKGMKAPAGQTSKSANVTIGNTGDGSGYGN 287
>gi|62734435|gb|AAX96544.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
sativa Japonica Group]
gi|77550433|gb|ABA93230.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1321
Score = 40.0 bits (92), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 7/44 (15%)
Query: 11 CFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASGGGGGGSGVG 54
CF CG+ GHW++DC P + S N GGG SG G
Sbjct: 389 CFVCGKSGHWAKDC-------PKRKDRKSANMIISEGGGTSGYG 425
>gi|108711361|gb|ABF99156.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1413
Score = 40.0 bits (92), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 7/44 (15%)
Query: 11 CFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASGGGGGGSGVG 54
CF CG+ GHW++DC P + S N GGG SG G
Sbjct: 359 CFVCGKSGHWAKDC-------PERKDRKSANMIISEGGGTSGYG 395
>gi|443717844|gb|ELU08726.1| hypothetical protein CAPTEDRAFT_188813, partial [Capitella teleta]
Length = 445
Score = 40.0 bits (92), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
Query: 10 GCFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASG 45
CF+CG+PGH+SR+C + ++S P N ASG
Sbjct: 308 SCFRCGKPGHFSRECQTKNTSVPPVKTMDQN--ASG 341
>gi|38347007|emb|CAE02261.2| OSJNBb0058J09.8 [Oryza sativa Japonica Group]
Length = 1282
Score = 40.0 bits (92), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 11 CFKCGRPGHWSRDCPSSSS-SAPSNSNFPSNNTASGGGGGGSGVGD 55
CF CG+ GH +R CP AP+ S N G G GSG G+
Sbjct: 242 CFVCGQVGHLARKCPQRKGMKAPAGQTSKSANVTIGNTGDGSGYGN 287
>gi|37718845|gb|AAR01716.1| putative Gag and Pol polyprotein [Oryza sativa Japonica Group]
Length = 1302
Score = 40.0 bits (92), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 11 CFKCGRPGHWSRDCPSSSS-SAPSNSNFPSNNTASGGGGGGSGVGD 55
CF CG+ GH +R CP AP+ S N G G GSG G+
Sbjct: 242 CFVCGQVGHLARKCPQRKGMKAPAGQTSKSANVTIGNTGDGSGYGN 287
>gi|4126714|dbj|BAA36710.1| DEAD-Box Protein [Ciona intestinalis]
Length = 669
Score = 40.0 bits (92), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 20/31 (64%)
Query: 6 AAPTGCFKCGRPGHWSRDCPSSSSSAPSNSN 36
A GCFKCG GH SR+CP ++ S +SN
Sbjct: 114 ARSKGCFKCGEEGHMSRECPQNTGSGDRHSN 144
Score = 37.7 bits (86), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 19/30 (63%)
Query: 6 AAPTGCFKCGRPGHWSRDCPSSSSSAPSNS 35
A GCFKCG GH SR+CP ++ S +S
Sbjct: 48 ARSKGCFKCGEEGHMSRECPQNTGSGFGDS 77
Score = 37.7 bits (86), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 19/30 (63%)
Query: 6 AAPTGCFKCGRPGHWSRDCPSSSSSAPSNS 35
A GCFKCG GH SR+CP ++ S +S
Sbjct: 81 ARSKGCFKCGEEGHMSRECPQNTGSGFGDS 110
>gi|77551155|gb|ABA93952.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1336
Score = 40.0 bits (92), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 11 CFKCGRPGHWSRDCPSSSS-SAPSNSNFPSNNTASGGGGGGSGVGD 55
CF CG+ GH +R CP AP+ S N G G GSG G+
Sbjct: 242 CFVCGQVGHLARKCPQRKGMKAPAGQTSKSANVTIGNTGDGSGYGN 287
>gi|108862128|gb|ABG21864.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1297
Score = 40.0 bits (92), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 7/44 (15%)
Query: 11 CFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASGGGGGGSGVG 54
CF CG+ GHW++DC P + S N GGG SG G
Sbjct: 316 CFVCGKSGHWAKDC-------PERKDRKSANMVISEGGGTSGYG 352
>gi|38345215|emb|CAD40198.2| OSJNBb0043H09.7 [Oryza sativa Japonica Group]
Length = 1302
Score = 40.0 bits (92), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 11 CFKCGRPGHWSRDCPSSSS-SAPSNSNFPSNNTASGGGGGGSGVGD 55
CF CG+ GH +R CP AP+ S N G G GSG G+
Sbjct: 242 CFVCGQVGHLARKCPQRKGMKAPAGQTSKSANVTIGNTGDGSGYGN 287
>gi|37718811|gb|AAR01682.1| putative gag and pol protein [Oryza sativa Japonica Group]
Length = 1302
Score = 40.0 bits (92), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 11 CFKCGRPGHWSRDCPSSSS-SAPSNSNFPSNNTASGGGGGGSGVGD 55
CF CG+ GH +R CP AP+ S N G G GSG G+
Sbjct: 242 CFVCGQVGHLARKCPQRKGMKAPAGQTSKSANVTIGNTGDGSGYGN 287
>gi|9309363|dbj|BAB03249.1| polyprotein [Oryza sativa]
Length = 1268
Score = 40.0 bits (92), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 7/44 (15%)
Query: 11 CFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASGGGGGGSGVG 54
CF CG+ GHW++DC P + S N GGG SG G
Sbjct: 214 CFVCGKSGHWAKDC-------PERKDRKSANMIISEGGGTSGYG 250
>gi|108862795|gb|ABA99473.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1287
Score = 40.0 bits (92), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 11 CFKCGRPGHWSRDCPSSSS-SAPSNSNFPSNNTASGGGGGGSGVGD 55
CF CG+ GH +R CP AP+ S N G G GSG G+
Sbjct: 203 CFVCGQVGHLARKCPQRKGMKAPAGQTSKSANVTIGNTGDGSGYGN 248
>gi|116309875|emb|CAH66912.1| OSIGBa0126B18.5 [Oryza sativa Indica Group]
Length = 1413
Score = 40.0 bits (92), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 7/44 (15%)
Query: 11 CFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASGGGGGGSGVG 54
CF CG+ GHW++DC P + S N GGG SG G
Sbjct: 359 CFVCGKSGHWAKDC-------PERKDRKSANMIISEGGGTSGYG 395
>gi|55416038|gb|AAV43959.2| putative polyprotein [Oryza sativa Japonica Group]
Length = 1268
Score = 40.0 bits (92), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 7/44 (15%)
Query: 11 CFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASGGGGGGSGVG 54
CF CG+ GHW++DC P + S N GGG SG G
Sbjct: 214 CFVCGKSGHWAKDC-------PERKDRKSANMIISEGGGTSGYG 250
>gi|52353549|gb|AAU44115.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1717
Score = 40.0 bits (92), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 9/65 (13%)
Query: 6 AAPTGCFKCGRPGHWSRDCPS----SSSSAPSNSNFPS-----NNTASGGGGGGSGVGDG 56
+ P CF CG PGH++ CP ++ AP+NSN P+ N+ A+ V G
Sbjct: 575 SKPVICFNCGDPGHYADKCPKPRRVKNAPAPNNSNVPAPKARVNHVAAAEAQNAPDVVLG 634
Query: 57 GVSVS 61
V+
Sbjct: 635 TFPVN 639
>gi|38344281|emb|CAE03764.2| OSJNBa0013K16.13 [Oryza sativa Japonica Group]
Length = 1264
Score = 40.0 bits (92), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 11 CFKCGRPGHWSRDCPSSSS-SAPSNSNFPSNNTASGGGGGGSGVGD 55
CF CG+ GH +R CP AP+ S N G G GSG G+
Sbjct: 242 CFVCGQVGHLARKCPQRKGMKAPAGQTSKSANVTIGNTGDGSGYGN 287
>gi|18029448|gb|AAL56547.1|AF387862_1 gag polyprotein [Anopheles gambiae]
Length = 476
Score = 40.0 bits (92), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 10/77 (12%)
Query: 11 CFKCGRPGHWSRDCPSSSSSAPSNSNF-----PSNNTASGGGGGGSGVGDGGVSVSKSA- 64
C +C +PGH RDCP S++ P+++ + N +S GG S V+KS+
Sbjct: 204 CHRCRKPGHMKRDCPMESNNTPTSTTMRDYSRKNENCSSSGGQRESLKPKPKGKVAKSSE 263
Query: 65 ----IGVKEKPKKLPRS 77
+GV K ++ P+S
Sbjct: 264 FSFTVGVVSKKREQPKS 280
>gi|50080289|gb|AAT69624.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1401
Score = 40.0 bits (92), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 21/44 (47%), Gaps = 7/44 (15%)
Query: 11 CFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASGGGGGGSGVG 54
CF CG+ GHW++DCP S N GGG SG G
Sbjct: 396 CFVCGKSGHWAKDCPECKDRK-------SANMIISEGGGTSGYG 432
>gi|31415906|gb|AAP50927.1| putative polyprotein [Oryza sativa Japonica Group]
gi|108708705|gb|ABF96500.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1240
Score = 40.0 bits (92), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 7/44 (15%)
Query: 11 CFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASGGGGGGSGVG 54
CF CG+ GHW++DC P + S N GGG SG G
Sbjct: 214 CFVCGKSGHWAKDC-------PERKDRKSANMIISEGGGTSGYG 250
>gi|146182859|ref|XP_001025435.2| Zinc knuckle family protein [Tetrahymena thermophila]
gi|146143687|gb|EAS05190.2| Zinc knuckle family protein [Tetrahymena thermophila SB210]
Length = 1748
Score = 40.0 bits (92), Expect = 0.86, Method: Composition-based stats.
Identities = 13/24 (54%), Positives = 18/24 (75%)
Query: 3 NAKAAPTGCFKCGRPGHWSRDCPS 26
N + +GCFKCG GH+S+DCP+
Sbjct: 1493 NQQQKKSGCFKCGEEGHFSKDCPN 1516
>gi|110289417|gb|ABG66192.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1457
Score = 40.0 bits (92), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 7/44 (15%)
Query: 11 CFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASGGGGGGSGVG 54
CF CG+ GHW++DC P + S N GGG SG G
Sbjct: 403 CFVCGKSGHWAKDC-------PERKDRKSANMIISEGGGTSGYG 439
>gi|41469360|gb|AAS07202.1| putative integrase [Oryza sativa Japonica Group]
gi|108708916|gb|ABF96711.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1456
Score = 40.0 bits (92), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 7/44 (15%)
Query: 11 CFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASGGGGGGSGVG 54
CF CG+ GHW++DC P + S N GGG SG G
Sbjct: 402 CFVCGKSGHWAKDC-------PERKDRKSANMIISEGGGTSGYG 438
>gi|161752|gb|AAC37171.1| cnjB [Tetrahymena thermophila]
gi|737494|prf||1922371A cnjB gene
Length = 1748
Score = 40.0 bits (92), Expect = 0.87, Method: Composition-based stats.
Identities = 13/24 (54%), Positives = 18/24 (75%)
Query: 3 NAKAAPTGCFKCGRPGHWSRDCPS 26
N + +GCFKCG GH+S+DCP+
Sbjct: 1493 NQQQKKSGCFKCGEEGHFSKDCPN 1516
>gi|281208685|gb|EFA82861.1| hypothetical protein PPL_04556 [Polysphondylium pallidum PN500]
Length = 615
Score = 40.0 bits (92), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 31/52 (59%), Gaps = 6/52 (11%)
Query: 3 NAKAAPTG----CFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASGGGGGG 50
N K TG CFKC + GH SRDCP +SSS+ S + N+ +SGGG G
Sbjct: 22 NQKGGGTGHDRACFKCNQTGHISRDCPEASSSSSSRAG--GNDRSSGGGAGN 71
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/24 (62%), Positives = 17/24 (70%)
Query: 10 GCFKCGRPGHWSRDCPSSSSSAPS 33
CFKC + GH SRDCP +SSS S
Sbjct: 124 ACFKCNQTGHISRDCPEASSSISS 147
Score = 37.0 bits (84), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 13/20 (65%), Positives = 15/20 (75%)
Query: 10 GCFKCGRPGHWSRDCPSSSS 29
CFKC + GH SRDCP +SS
Sbjct: 74 ACFKCNQTGHISRDCPEASS 93
Score = 36.6 bits (83), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 12/16 (75%), Positives = 13/16 (81%)
Query: 10 GCFKCGRPGHWSRDCP 25
CFKC +PGH SRDCP
Sbjct: 186 NCFKCNQPGHISRDCP 201
>gi|110289309|gb|AAP54390.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1479
Score = 40.0 bits (92), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 7/44 (15%)
Query: 11 CFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASGGGGGGSGVG 54
CF CG+ GHW++DC P + S N GGG SG G
Sbjct: 425 CFVCGKSGHWAKDC-------PERKDRKSANMIISEGGGTSGYG 461
>gi|32487304|emb|CAE05795.1| OSJNBb0046K02.5 [Oryza sativa Japonica Group]
Length = 1356
Score = 40.0 bits (92), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 11 CFKCGRPGHWSRDCPSSSS-SAPSNSNFPSNNTASGGGGGGSGVGD 55
CF CG+ GH +R CP AP+ S N G G GSG G+
Sbjct: 242 CFVCGQVGHLARKCPQRKGMKAPAGQTSKSANVTIGNTGDGSGYGN 287
>gi|53981174|gb|AAV24814.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1289
Score = 40.0 bits (92), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 11 CFKCGRPGHWSRDCPSSSS-SAPSNSNFPSNNTASGGGGGGSGVGD 55
CF CG+ GH +R CP AP+ S N G G GSG G+
Sbjct: 242 CFVCGQVGHLARKCPQRKGMKAPAGQTSKSANVTIGNTGDGSGYGN 287
>gi|13129472|gb|AAK13130.1|AC083945_5 Putative gag-pol polyprotein [Oryza sativa Japonica Group]
Length = 1363
Score = 40.0 bits (92), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 16/24 (66%)
Query: 11 CFKCGRPGHWSRDCPSSSSSAPSN 34
CF CG+PGHW++DCP +N
Sbjct: 400 CFVCGKPGHWAKDCPERKDKKSAN 423
>gi|32488578|emb|CAE03086.1| OSJNBa0017B10.1 [Oryza sativa Japonica Group]
gi|38345937|emb|CAD41412.2| OSJNBb0078D11.12 [Oryza sativa Japonica Group]
Length = 1320
Score = 40.0 bits (92), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 11 CFKCGRPGHWSRDCPSSSS-SAPSNSNFPSNNTASGGGGGGSGVGD 55
CF CG+ GH +R CP AP+ S N G G GSG G+
Sbjct: 242 CFVCGQVGHLARKCPQRKGMKAPAGQTSKSANVTIGNTGDGSGYGN 287
>gi|15144313|gb|AAK84454.1|AC087192_15 putative polyprotein [Oryza sativa Japonica Group]
Length = 1308
Score = 40.0 bits (92), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 11 CFKCGRPGHWSRDCPSSSS-SAPSNSNFPSNNTASGGGGGGSGVGD 55
CF CG+ GH +R CP AP+ S N G G GSG G+
Sbjct: 242 CFVCGQVGHLARKCPQRKGMKAPAGQTSKSANVTIGNTGDGSGYGN 287
>gi|357484641|ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
truncatula]
gi|355513943|gb|AES95566.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
truncatula]
Length = 1723
Score = 40.0 bits (92), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
Query: 11 CFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASGGGGGGSGVGDG 56
C+KC +PGHW+ +CP+ S++ S+ N +NT G G DG
Sbjct: 860 CYKCNQPGHWANNCPNMSAAPQSHGN---SNTGQGRYGIAQNQPDG 902
>gi|54291731|gb|AAV32100.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1388
Score = 40.0 bits (92), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 7/44 (15%)
Query: 11 CFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASGGGGGGSGVG 54
CF CG+ GHW++DC P + S N GGG SG G
Sbjct: 389 CFVCGKSGHWAKDC-------PERKDRKSANMIISEGGGTSGYG 425
>gi|54287603|gb|AAV31347.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1059
Score = 40.0 bits (92), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 11 CFKCGRPGHWSRDCPSSSS-SAPSNSNFPSNNTASGGGGGGSGVGD 55
CF CG+ GH +R CP AP+ S N G G GSG G+
Sbjct: 365 CFVCGQVGHLARKCPQRKGMKAPAGQTSKSANVTIGNTGDGSGYGN 410
>gi|110289385|gb|AAP54573.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1320
Score = 40.0 bits (92), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 11 CFKCGRPGHWSRDCPSSSS-SAPSNSNFPSNNTASGGGGGGSGVGD 55
CF CG+ GH +R CP AP+ S N G G GSG G+
Sbjct: 242 CFVCGQVGHLARKCPQRKGMKAPAGQTSKSANVTIGNTGDGSGYGN 287
>gi|39545722|emb|CAD40924.3| OSJNBa0033G16.12 [Oryza sativa Japonica Group]
Length = 1320
Score = 40.0 bits (92), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 11 CFKCGRPGHWSRDCPSSSS-SAPSNSNFPSNNTASGGGGGGSGVGD 55
CF CG+ GH +R CP AP+ S N G G GSG G+
Sbjct: 242 CFVCGQVGHLARKCPQRKGMKAPAGQTSKSANVTIGNTGDGSGYGN 287
>gi|77556089|gb|ABA98885.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1452
Score = 40.0 bits (92), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 7/44 (15%)
Query: 11 CFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASGGGGGGSGVG 54
CF CG+ GHW++DC P + S N GGG SG G
Sbjct: 402 CFVCGKSGHWAKDC-------PERKDRKSANMIISEGGGTSGYG 438
>gi|108863988|gb|ABA91445.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1320
Score = 40.0 bits (92), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 11 CFKCGRPGHWSRDCPSSSS-SAPSNSNFPSNNTASGGGGGGSGVGD 55
CF CG+ GH +R CP AP+ S N G G GSG G+
Sbjct: 242 CFVCGQVGHLARKCPQRKGMKAPAGQTSKSANVTIGNTGDGSGYGN 287
>gi|47900532|gb|AAT39267.1| putative polyprotein [Oryza sativa Japonica Group]
gi|50878407|gb|AAT85181.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1297
Score = 40.0 bits (92), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 11 CFKCGRPGHWSRDCPS-SSSSAPSNSNFPSNNTASGGGGGGSGVGD 55
CF CG+ GH +R CP AP+ S N G G GSG G+
Sbjct: 242 CFVCGQVGHLARKCPQHKGMKAPAGQTSKSANVTIGNTGDGSGYGN 287
>gi|14626276|gb|AAK71544.1|AC087852_4 putative polyprotein [Oryza sativa Japonica Group]
Length = 1308
Score = 40.0 bits (92), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 11 CFKCGRPGHWSRDCPSSSS-SAPSNSNFPSNNTASGGGGGGSGVGD 55
CF CG+ GH +R CP AP+ S N G G GSG G+
Sbjct: 242 CFVCGQVGHLARKCPQRKGMKAPAGQTSKSANVTIGNTGDGSGYGN 287
>gi|77555142|gb|ABA97938.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1320
Score = 40.0 bits (92), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 11 CFKCGRPGHWSRDCPSSSS-SAPSNSNFPSNNTASGGGGGGSGVGD 55
CF CG+ GH +R CP AP+ S N G G GSG G+
Sbjct: 242 CFVCGQVGHLARKCPQRKGMKAPAGQTSKSANVTIGNTGDGSGYGN 287
>gi|77554076|gb|ABA96872.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 732
Score = 40.0 bits (92), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 21/44 (47%), Gaps = 7/44 (15%)
Query: 11 CFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASGGGGGGSGVG 54
CF CG+ GHW++DCP S N GG SGVG
Sbjct: 213 CFVCGKSGHWAKDCPERKERK-------SANMVISEGGETSGVG 249
>gi|77548453|gb|ABA91250.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1320
Score = 40.0 bits (92), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 11 CFKCGRPGHWSRDCPSSSS-SAPSNSNFPSNNTASGGGGGGSGVGD 55
CF CG+ GH +R CP AP+ S N G G GSG G+
Sbjct: 242 CFVCGQVGHLARKCPQRKGMKAPAGQTSKSANVTIGNTGDGSGYGN 287
>gi|31432391|gb|AAP54028.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1361
Score = 40.0 bits (92), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 7/44 (15%)
Query: 11 CFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASGGGGGGSGVG 54
CF CG+ GHW++DC P + S N GGG SG G
Sbjct: 381 CFVCGKSGHWAKDC-------PERKDRKSANMIISEGGGTSGYG 417
>gi|302695537|ref|XP_003037447.1| hypothetical protein SCHCODRAFT_104251 [Schizophyllum commune H4-8]
gi|300111144|gb|EFJ02545.1| hypothetical protein SCHCODRAFT_104251, partial [Schizophyllum
commune H4-8]
Length = 490
Score = 40.0 bits (92), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 17/25 (68%)
Query: 8 PTGCFKCGRPGHWSRDCPSSSSSAP 32
P CF+CG PGHW+R+CP+ P
Sbjct: 157 PGSCFRCGVPGHWARECPTYPGPPP 181
>gi|20303592|gb|AAM19019.1|AC084748_9 putative polyprotein [Oryza sativa Japonica Group]
Length = 1394
Score = 40.0 bits (92), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 7/44 (15%)
Query: 11 CFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASGGGGGGSGVG 54
CF CG+ GHW++DC P + S N GGG SG G
Sbjct: 340 CFVCGKSGHWAKDC-------PERKDRKSANMIISEGGGTSGYG 376
>gi|57863895|gb|AAG03096.2|AC073405_12 putative polyprotein [Oryza sativa Japonica Group]
gi|57863849|gb|AAW56890.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1274
Score = 40.0 bits (92), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 11 CFKCGRPGHWSRDCPSSSS-SAPSNSNFPSNNTASGGGGGGSGVGD 55
CF CG+ GH +R CP AP+ S N G G GSG G+
Sbjct: 242 CFVCGQVGHLARKCPQRKGMKAPAGQTSKSANVTIGNTGDGSGYGN 287
>gi|62734723|gb|AAX96832.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
sativa Japonica Group]
Length = 1320
Score = 40.0 bits (92), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 11 CFKCGRPGHWSRDCPSSSS-SAPSNSNFPSNNTASGGGGGGSGVGD 55
CF CG+ GH +R CP AP+ S N G G GSG G+
Sbjct: 242 CFVCGQVGHLARKCPQRKGMKAPAGQTSKSANVTIGNTGDGSGYGN 287
>gi|50511444|gb|AAT77367.1| putative polyprotein [Oryza sativa Japonica Group]
gi|51854387|gb|AAU10767.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 1320
Score = 40.0 bits (92), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 11 CFKCGRPGHWSRDCPSSSS-SAPSNSNFPSNNTASGGGGGGSGVGD 55
CF CG+ GH +R CP AP+ S N G G GSG G+
Sbjct: 242 CFVCGQVGHLARKCPQRKGMKAPAGQTSKSANVTIGNTGDGSGYGN 287
>gi|32489125|emb|CAE04792.1| OSJNBb0018J12.5 [Oryza sativa Japonica Group]
Length = 1320
Score = 40.0 bits (92), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 11 CFKCGRPGHWSRDCPSSSS-SAPSNSNFPSNNTASGGGGGGSGVGD 55
CF CG+ GH +R CP AP+ S N G G GSG G+
Sbjct: 242 CFVCGQIGHLARKCPQRKGMKAPAGQTSKSANVTIGNTGDGSGYGN 287
>gi|297814870|ref|XP_002875318.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297321156|gb|EFH51577.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 247
Score = 40.0 bits (92), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 14/19 (73%), Positives = 18/19 (94%)
Query: 11 CFKCGRPGHWSRDCPSSSS 29
CFKCG+PGH++R+CPS SS
Sbjct: 120 CFKCGKPGHFARECPSESS 138
>gi|15231557|ref|NP_189273.1| RNA recognition motif and CCHC-type zinc finger domain-containing
protein [Arabidopsis thaliana]
gi|15983477|gb|AAL11606.1|AF424613_1 AT3g26420/F20C19_14 [Arabidopsis thaliana]
gi|9294301|dbj|BAB02203.1| unnamed protein product [Arabidopsis thaliana]
gi|15451066|gb|AAK96804.1| Unknown protein [Arabidopsis thaliana]
gi|18377412|gb|AAL66872.1| unknown protein [Arabidopsis thaliana]
gi|62320797|dbj|BAD93728.1| RNA-binding protein [Arabidopsis thaliana]
gi|110742443|dbj|BAE99140.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|332643635|gb|AEE77156.1| RNA recognition motif and CCHC-type zinc finger domain-containing
protein [Arabidopsis thaliana]
Length = 245
Score = 40.0 bits (92), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 14/19 (73%), Positives = 18/19 (94%)
Query: 11 CFKCGRPGHWSRDCPSSSS 29
CFKCG+PGH++R+CPS SS
Sbjct: 120 CFKCGKPGHFARECPSESS 138
>gi|108711058|gb|ABF98853.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1320
Score = 40.0 bits (92), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 11 CFKCGRPGHWSRDCPSSSS-SAPSNSNFPSNNTASGGGGGGSGVGD 55
CF CG+ GH +R CP AP+ S N G G GSG G+
Sbjct: 242 CFVCGQVGHLARKCPQRKGMKAPAGQTSKSANVTIGNTGDGSGYGN 287
>gi|38344706|emb|CAE05248.2| OSJNBb0115I09.10 [Oryza sativa Japonica Group]
Length = 1321
Score = 40.0 bits (92), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 7/44 (15%)
Query: 11 CFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASGGGGGGSGVG 54
CF CG+ GHW++DC P + S N GGG SG G
Sbjct: 279 CFVCGKSGHWAKDC-------PERKDRKSANMIISEGGGTSGYG 315
>gi|77555989|gb|ABA98785.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1303
Score = 39.7 bits (91), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 7/44 (15%)
Query: 11 CFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASGGGGGGSGVG 54
CF CG+ GHW++DC P + S N GGG SG G
Sbjct: 359 CFVCGKSGHWAKDC-------PERKDRKSANMIISEGGGTSGYG 395
>gi|218199217|gb|EEC81644.1| hypothetical protein OsI_25179 [Oryza sativa Indica Group]
Length = 343
Score = 39.7 bits (91), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 12/15 (80%), Positives = 14/15 (93%)
Query: 11 CFKCGRPGHWSRDCP 25
CFKCGR GHW+R+CP
Sbjct: 127 CFKCGRAGHWARECP 141
>gi|57834009|emb|CAI44606.1| P0650D04.10 [Oryza sativa Japonica Group]
Length = 1194
Score = 39.7 bits (91), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 11 CFKCGRPGHWSRDCPSSSS-SAPSNSNFPSNNTASGGGGGGSGVGD 55
CF CG+ GH +R CP AP+ S N G G GSG G+
Sbjct: 197 CFVCGQVGHLARKCPQRKGMKAPAGQTSKSANVTIGNTGDGSGYGN 242
>gi|32489064|emb|CAE03994.1| OSJNBb0089B03.8 [Oryza sativa Japonica Group]
Length = 1113
Score = 39.7 bits (91), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 11 CFKCGRPGHWSRDCPSSSS-SAPSNSNFPSNNTASGGGGGGSGVGD 55
CF CG+ GH +R CP AP+ S N G G GSG G+
Sbjct: 211 CFVCGQVGHLARKCPQRKGMKAPAGQTSKSANVTIGNTGDGSGYGN 256
>gi|328767259|gb|EGF77309.1| hypothetical protein BATDEDRAFT_32353 [Batrachochytrium
dendrobatidis JAM81]
Length = 179
Score = 39.7 bits (91), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 14/26 (53%), Positives = 17/26 (65%)
Query: 10 GCFKCGRPGHWSRDCPSSSSSAPSNS 35
GCFKCG GHW+R+CP+S S
Sbjct: 87 GCFKCGETGHWARECPNSGGGGRDRS 112
>gi|50080271|gb|AAT69606.1| putative polyprotein [Oryza sativa Japonica Group]
gi|53749238|gb|AAU90098.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1320
Score = 39.7 bits (91), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 11 CFKCGRPGHWSRDCPSSSS-SAPSNSNFPSNNTASGGGGGGSGVGD 55
CF CG+ GH +R CP AP+ S N G G GSG G+
Sbjct: 242 CFVCGQVGHLARKCPQRKGMKAPAGQTSKSANVTIGNTGDGSGYGN 287
>gi|62701755|gb|AAX92828.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
sativa Japonica Group]
gi|62733724|gb|AAX95834.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
sativa Japonica Group]
gi|77550359|gb|ABA93156.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1277
Score = 39.7 bits (91), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 11 CFKCGRPGHWSRDCPSSSS-SAPSNSNFPSNNTASGGGGGGSGVGD 55
CF CG+ GH +R CP AP+ S N G G GSG G+
Sbjct: 242 CFVCGQVGHLARKCPQRKGMKAPAGQTSKSANVTIGNTGDGSGYGN 287
>gi|348544593|ref|XP_003459765.1| PREDICTED: RNA-binding protein 4.1-like [Oreochromis niloticus]
Length = 380
Score = 39.7 bits (91), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 20/27 (74%)
Query: 9 TGCFKCGRPGHWSRDCPSSSSSAPSNS 35
TGCF CG+ GHWS+DCP + + S+S
Sbjct: 160 TGCFVCGKHGHWSKDCPVGRNGSYSDS 186
>gi|47777371|gb|AAT38005.1| putative polyprotein [Oryza sativa Japonica Group]
gi|49328115|gb|AAT58813.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 1198
Score = 39.7 bits (91), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Query: 11 CFKCGRPGHWSRDCPSSSS-SAPSNSNFPSNNTASGGGGGGSGVG 54
CF CG+PGH +R CP AP+ S N G GSG G
Sbjct: 195 CFVCGQPGHLARKCPQRKGMKAPAGQTSNSANVTIGNTRDGSGYG 239
>gi|77555288|gb|ABA98084.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1298
Score = 39.7 bits (91), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 21/44 (47%), Gaps = 7/44 (15%)
Query: 11 CFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASGGGGGGSGVG 54
CF CG+ GHW++DCP S N GGG SG G
Sbjct: 359 CFVCGKSGHWAKDCPERKDRK-------SANMIISEGGGTSGYG 395
>gi|77552577|gb|ABA95374.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1314
Score = 39.7 bits (91), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 7/44 (15%)
Query: 11 CFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASGGGGGGSGVG 54
CF CG+ GHW++DC P + S N GGG SG G
Sbjct: 386 CFVCGKSGHWAKDC-------PERKDRKSANMIISEGGGTSGYG 422
>gi|55168300|gb|AAV44166.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1342
Score = 39.7 bits (91), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 7/44 (15%)
Query: 11 CFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASGGGGGGSGVG 54
CF CG+ GHW++DC P + S N GGG SG G
Sbjct: 343 CFVCGKSGHWAKDC-------PERKDRKSANMIISEGGGTSGYG 379
>gi|226507970|ref|NP_001140374.1| uncharacterized protein LOC100272427 [Zea mays]
gi|194699220|gb|ACF83694.1| unknown [Zea mays]
Length = 395
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 13/20 (65%), Positives = 16/20 (80%)
Query: 8 PTGCFKCGRPGHWSRDCPSS 27
P C+KCG PGH +RDCPS+
Sbjct: 122 PGACYKCGEPGHMARDCPSA 141
>gi|409051294|gb|EKM60770.1| hypothetical protein PHACADRAFT_246886 [Phanerochaete carnosa
HHB-10118-sp]
Length = 447
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 22/31 (70%)
Query: 8 PTGCFKCGRPGHWSRDCPSSSSSAPSNSNFP 38
P CFKCG+ GHW+R+CP+S++ S+ P
Sbjct: 148 PGACFKCGQVGHWARECPNSTTGDSRRSSAP 178
>gi|224060351|ref|XP_002300156.1| predicted protein [Populus trichocarpa]
gi|222847414|gb|EEE84961.1| predicted protein [Populus trichocarpa]
Length = 370
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 13/17 (76%), Positives = 16/17 (94%)
Query: 11 CFKCGRPGHWSRDCPSS 27
C+KCG+PGHW+RDC SS
Sbjct: 345 CYKCGKPGHWARDCTSS 361
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 9/45 (20%)
Query: 9 TGCFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASGGGGGGSGV 53
+ CFKCG+ GHW++DC S+S +P+ G G G SG
Sbjct: 309 SSCFKCGKEGHWAKDCGMSTSDSPA---------TFGAGSGSSGT 344
>gi|24431600|gb|AAN61480.1| Putative polyprotein from transposon TNT [Oryza sativa Japonica
Group]
Length = 1911
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 11 CFKCGRPGHWSRDCPSSSS-SAPSNSNFPSNNTASGGGGGGSGVGD 55
CF CG+ GH +R CP AP+ S N G G GSG G+
Sbjct: 242 CFVCGQVGHLARKCPQRKGMKAPAGQTSKSANVTIGNTGDGSGYGN 287
>gi|77551023|gb|ABA93820.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1166
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 11 CFKCGRPGHWSRDCPSSSS-SAPSNSNFPSNNTASGGGGGGSGVGD 55
CF CG+PGH ++ CP AP+ S N G GSG G+
Sbjct: 133 CFVCGQPGHLAKKCPQRKGMKAPAGQTSKSANVTISNTGDGSGYGN 178
>gi|19881576|gb|AAM00977.1|AC090482_6 Putative retroelement [Oryza sativa Japonica Group]
gi|31431306|gb|AAP53108.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 493
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 7/44 (15%)
Query: 11 CFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASGGGGGGSGVG 54
CF CG+ GHW++DC P + S N GGG SG G
Sbjct: 395 CFVCGKSGHWAKDC-------PERKDRKSANMVISEGGGTSGCG 431
>gi|168008942|ref|XP_001757165.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691663|gb|EDQ78024.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 161
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 12/16 (75%), Positives = 16/16 (100%)
Query: 11 CFKCGRPGHWSRDCPS 26
CFKCG+PGHW+R+CP+
Sbjct: 123 CFKCGQPGHWARECPT 138
>gi|77552972|gb|ABA95768.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1151
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 11 CFKCGRPGHWSRDCPSSSS-SAPSNSNFPSNNTASGGGGGGSGVGD 55
CF CG+ GH +R CP AP+ S N G G GSG G+
Sbjct: 113 CFVCGQVGHLARKCPQRKGMKAPAGQTSKSANVTIGNTGDGSGYGN 158
>gi|10140704|gb|AAG13538.1|AC023240_11 putative gag-pol polyprotein [Oryza sativa Japonica Group]
Length = 1408
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 7/44 (15%)
Query: 11 CFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASGGGGGGSGVG 54
CF CG+ GHW++DC P + S N GGG SG G
Sbjct: 354 CFVCGKSGHWAKDC-------PERKDRKSANMIISEGGGTSGYG 390
>gi|77553336|gb|ABA96132.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1357
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 7/44 (15%)
Query: 11 CFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASGGGGGGSGVG 54
CF CG+ GHW++DC P + S N GGG SG G
Sbjct: 315 CFVCGKSGHWAKDC-------PERKDRKSANMIISEGGGTSGYG 351
>gi|116311004|emb|CAH67938.1| H0211F06-OSIGBa0153M17.10 [Oryza sativa Indica Group]
Length = 1621
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 4/38 (10%)
Query: 6 AAPTGCFKCGRPGHWSRDCPS----SSSSAPSNSNFPS 39
+ P CF CG PGH++ CP ++ AP+NSN P+
Sbjct: 584 SKPVVCFNCGDPGHYADKCPKPRRVKNAPAPNNSNVPA 621
>gi|77548605|gb|ABA91402.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 2027
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 11 CFKCGRPGHWSRDCPSSSS-SAPSNSNFPSNNTASGGGGGGSGVGD 55
CF CG+ GH +R CP AP+ S N G G GSG G+
Sbjct: 437 CFVCGQVGHLARKCPQRKGMKAPAGQTSKSANVTIGNTGDGSGYGN 482
>gi|77548324|gb|ABA91121.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1186
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 7/44 (15%)
Query: 11 CFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASGGGGGGSGVG 54
CF CG+ GHW++DC P + S N GGG SG G
Sbjct: 402 CFVCGKSGHWAKDC-------PERKDRKSANMIISEGGGTSGYG 438
>gi|389741774|gb|EIM82962.1| hypothetical protein STEHIDRAFT_124271 [Stereum hirsutum FP-91666
SS1]
Length = 284
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 24/42 (57%)
Query: 10 GCFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASGGGGGGS 51
GCFKCG+ GHW+ CP+ + SN F S T GG G+
Sbjct: 139 GCFKCGQEGHWASACPNPQGGSDSNKRFKSGGTFGDSGGTGN 180
>gi|402224353|gb|EJU04416.1| hypothetical protein DACRYDRAFT_114745 [Dacryopinax sp. DJM-731
SS1]
Length = 356
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Query: 5 KAAPTGCFKCGRPGHWSRDCPS-SSSSAPSNSN 36
+ A T CF C +PGH RDCP S S+APSN+N
Sbjct: 184 RQAQTICFACRQPGHSVRDCPDISGSAAPSNTN 216
>gi|108862305|gb|ABA96095.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 585
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Query: 11 CFKCGRPGHWSRDCPSSSS-SAPSNSNFPSNNTASGGGGGGSGVGDGG 57
CF CG+ GH +R CP AP+ S N G G GSG G G
Sbjct: 242 CFVCGQVGHLARKCPQRKGMKAPAGQTSKSANVTIGNTGDGSGYGRTG 289
>gi|148235767|ref|NP_001085690.1| MGC80472 protein [Xenopus laevis]
gi|49255990|gb|AAH73203.1| MGC80472 protein [Xenopus laevis]
Length = 336
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 23/46 (50%)
Query: 9 TGCFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASGGGGGGSGVG 54
T C++CG+ GHWS++CP + S +P + G S G
Sbjct: 160 TLCYRCGKDGHWSKECPLDQMAKEQASGYPPESFPDPYGPMRSAAG 205
>gi|38346256|emb|CAE02078.2| OSJNBa0074B10.6 [Oryza sativa Japonica Group]
Length = 1447
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 4/38 (10%)
Query: 6 AAPTGCFKCGRPGHWSRDCPS----SSSSAPSNSNFPS 39
+ P CF CG PGH++ CP ++ AP+NSN P+
Sbjct: 311 SKPVVCFNCGDPGHYADKCPKPRRVKNALAPNNSNVPA 348
>gi|58004799|gb|AAW62459.1| cellular nucleic acid binding protein mutant delta-RGG [synthetic
construct]
Length = 162
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/20 (75%), Positives = 18/20 (90%)
Query: 11 CFKCGRPGHWSRDCPSSSSS 30
CFKCGR GHW+R+CP+ SSS
Sbjct: 6 CFKCGRTGHWARECPTFSSS 25
>gi|145974735|gb|ABQ00071.1| VASA [Fenneropenaeus chinensis]
Length = 712
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
Query: 11 CFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASGGGGGGS 51
CFKCG GH +RDCPS+S S + +N N GGG S
Sbjct: 87 CFKCGDEGHMARDCPSASDSRGNRTN---NRRQDNWGGGSS 124
Score = 38.5 bits (88), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 14/17 (82%), Positives = 15/17 (88%)
Query: 10 GCFKCGRPGHWSRDCPS 26
GCFKCG+ GH SRDCPS
Sbjct: 175 GCFKCGQEGHMSRDCPS 191
>gi|77555016|gb|ABA97812.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1702
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 4/37 (10%)
Query: 6 AAPTGCFKCGRPGHWSRDCPS----SSSSAPSNSNFP 38
+ P CF CG PGH++ CP ++ AP+NSN P
Sbjct: 536 SKPVVCFNCGDPGHYADKCPKPRRVKNAPAPNNSNVP 572
>gi|323507851|emb|CBQ67722.1| conserved hypothetical protein [Sporisorium reilianum SRZ2]
Length = 635
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 11/17 (64%), Positives = 16/17 (94%)
Query: 11 CFKCGRPGHWSRDCPSS 27
CF+CG+PGHW +DCP++
Sbjct: 230 CFRCGKPGHWIQDCPTN 246
>gi|51038137|gb|AAT93940.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1861
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 11 CFKCGRPGHWSRDCPSSSS-SAPSNSNFPSNNTASGGGGGGSGVGD 55
CF CG+ GH +R CP AP+ S N G G GSG G+
Sbjct: 656 CFVCGQVGHLARKCPQRKGMKAPAGQTSKSANVTIGNTGDGSGYGN 701
>gi|71003604|ref|XP_756468.1| hypothetical protein UM00321.1 [Ustilago maydis 521]
gi|46096073|gb|EAK81306.1| hypothetical protein UM00321.1 [Ustilago maydis 521]
Length = 622
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 11/17 (64%), Positives = 16/17 (94%)
Query: 11 CFKCGRPGHWSRDCPSS 27
CF+CG+PGHW +DCP++
Sbjct: 230 CFRCGKPGHWIQDCPTN 246
>gi|77553461|gb|ABA96257.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza
sativa Japonica Group]
Length = 580
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 21/44 (47%), Gaps = 7/44 (15%)
Query: 11 CFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASGGGGGGSGVG 54
CF CG+ GHW++DCP S N GGG SG G
Sbjct: 51 CFVCGKSGHWAKDCPERKDRK-------SANMVISEGGGTSGYG 87
>gi|47777367|gb|AAT38001.1| Putative polyprotein [Oryza sativa Japonica Group]
Length = 1297
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 11 CFKCGRPGHWSRDCPSSSS-SAPSNSNFPSNNTASGGGGGGSGVGD 55
CF CG+ GH +R CP AP+ S N G G GSG G+
Sbjct: 242 CFVCGQVGHLARKCPQRKGMKAPAGQTSKSANVTIGNIGDGSGYGN 287
>gi|224100725|ref|XP_002311989.1| predicted protein [Populus trichocarpa]
gi|222851809|gb|EEE89356.1| predicted protein [Populus trichocarpa]
Length = 160
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 14/20 (70%), Positives = 15/20 (75%)
Query: 6 AAPTGCFKCGRPGHWSRDCP 25
A CFKCGR GHW+RDCP
Sbjct: 111 AGQDECFKCGRSGHWARDCP 130
>gi|49328112|gb|AAT58810.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1320
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 11 CFKCGRPGHWSRDCPSSSS-SAPSNSNFPSNNTASGGGGGGSGVGD 55
CF CG+ GH +R CP AP+ S N G G GSG G+
Sbjct: 242 CFVCGQVGHLARKCPQRKGMKAPAGQTSKSANVTIGNIGDGSGYGN 287
>gi|388852237|emb|CCF54048.1| uncharacterized protein [Ustilago hordei]
Length = 625
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 11/17 (64%), Positives = 16/17 (94%)
Query: 11 CFKCGRPGHWSRDCPSS 27
CF+CG+PGHW +DCP++
Sbjct: 229 CFRCGKPGHWIQDCPTN 245
>gi|302811189|ref|XP_002987284.1| hypothetical protein SELMODRAFT_37571 [Selaginella moellendorffii]
gi|300144919|gb|EFJ11599.1| hypothetical protein SELMODRAFT_37571 [Selaginella moellendorffii]
Length = 163
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 13/18 (72%), Positives = 16/18 (88%)
Query: 11 CFKCGRPGHWSRDCPSSS 28
CF+CGR GHW+R+CP SS
Sbjct: 141 CFRCGRQGHWARECPVSS 158
>gi|222635729|gb|EEE65861.1| hypothetical protein OsJ_21651 [Oryza sativa Japonica Group]
Length = 525
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 21/44 (47%), Gaps = 7/44 (15%)
Query: 11 CFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASGGGGGGSGVG 54
CF CG+ GHW++DCP S N GGG SG G
Sbjct: 40 CFVCGKSGHWAKDCPERKDR-------KSANMVISEGGGTSGYG 76
>gi|108711148|gb|ABF98943.1| retrotransposon protein, putative, unclassified, expressed [Oryza
sativa Japonica Group]
Length = 1460
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 11 CFKCGRPGHWSRDCPSSSS-SAPSNSNFPSNNTASGGGGGGSGVGD 55
CF CG+ GH +R CP AP+ S N G G GSG G+
Sbjct: 242 CFVCGQVGHLARKCPQRKGMKAPAGQTSKSANVTIGNTGDGSGYGN 287
>gi|242061678|ref|XP_002452128.1| hypothetical protein SORBIDRAFT_04g020190 [Sorghum bicolor]
gi|241931959|gb|EES05104.1| hypothetical protein SORBIDRAFT_04g020190 [Sorghum bicolor]
Length = 831
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 14/23 (60%), Positives = 18/23 (78%), Gaps = 2/23 (8%)
Query: 3 NAKAAPTGCFKCGRPGHWSRDCP 25
NA+ P CFKC +PGHWS++CP
Sbjct: 809 NARQGP--CFKCHQPGHWSKECP 829
>gi|302815033|ref|XP_002989199.1| hypothetical protein SELMODRAFT_37572 [Selaginella moellendorffii]
gi|300143099|gb|EFJ09793.1| hypothetical protein SELMODRAFT_37572 [Selaginella moellendorffii]
Length = 166
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 13/18 (72%), Positives = 16/18 (88%)
Query: 11 CFKCGRPGHWSRDCPSSS 28
CF+CGR GHW+R+CP SS
Sbjct: 143 CFRCGRQGHWARECPVSS 160
>gi|94556865|gb|AAY89069.2| vasa-like protein [Litopenaeus vannamei]
Length = 703
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
Query: 11 CFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASGGGGGGS 51
CFKCG GH +RDCPS+S S + +N N GGG S
Sbjct: 77 CFKCGDEGHMARDCPSASDSRGNRTN---NRRQDNWGGGSS 114
>gi|15229170|ref|NP_189872.1| CCHC-type zinc knuckle protein [Arabidopsis thaliana]
gi|7529257|emb|CAB86673.1| putative protein [Arabidopsis thaliana]
gi|17529084|gb|AAL38752.1| unknown protein [Arabidopsis thaliana]
gi|22136980|gb|AAM91719.1| unknown protein [Arabidopsis thaliana]
gi|332644235|gb|AEE77756.1| CCHC-type zinc knuckle protein [Arabidopsis thaliana]
Length = 372
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 14/18 (77%), Positives = 16/18 (88%)
Query: 11 CFKCGRPGHWSRDCPSSS 28
CFKCG+PGHWSRDC + S
Sbjct: 270 CFKCGKPGHWSRDCTAQS 287
Score = 38.1 bits (87), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 2 ENAKAAPTGCFKCGRPGHWSRDCPSSSSSAPSNS 35
+NAK T C+KCG+ GHW+RDC S + P S
Sbjct: 231 QNAKTG-TPCYKCGKEGHWARDCTVQSDTGPVKS 263
>gi|242085896|ref|XP_002443373.1| hypothetical protein SORBIDRAFT_08g018400 [Sorghum bicolor]
gi|241944066|gb|EES17211.1| hypothetical protein SORBIDRAFT_08g018400 [Sorghum bicolor]
Length = 1158
Score = 39.3 bits (90), Expect = 1.5, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 32/67 (47%), Gaps = 9/67 (13%)
Query: 11 CFKCGRPGHWSRDCPSSSSSAPSNSNFPSNN-----TASGGGGGGSGVGDGGVSVSKSAI 65
C+KC + GH SRDCP S+S N S + T + GG S + + V I
Sbjct: 984 CYKCKKAGHLSRDCPESTSEVDRNDGSISKSRDVMGTNTSPAGGNSPMDEDDV----QEI 1039
Query: 66 GVKEKPK 72
G +EK K
Sbjct: 1040 GDEEKEK 1046
>gi|125977312|ref|XP_001352689.1| GA21193 [Drosophila pseudoobscura pseudoobscura]
gi|54641438|gb|EAL30188.1| GA21193 [Drosophila pseudoobscura pseudoobscura]
Length = 352
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 21/38 (55%)
Query: 8 PTGCFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASG 45
P C++CGR GHWS++CP S PS +A G
Sbjct: 167 PEQCYRCGRSGHWSKECPRLYGSTGGGREPPSPLSAGG 204
>gi|77555208|gb|ABA98004.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 811
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 7/44 (15%)
Query: 11 CFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASGGGGGGSGVG 54
CF CG+P HW+++CP+ S N GGG SG G
Sbjct: 149 CFVCGKPRHWAKNCPNRKDK-------KSANMVISEGGGTSGYG 185
>gi|195997503|ref|XP_002108620.1| hypothetical protein TRIADDRAFT_51712 [Trichoplax adhaerens]
gi|190589396|gb|EDV29418.1| hypothetical protein TRIADDRAFT_51712 [Trichoplax adhaerens]
Length = 189
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 47/95 (49%), Gaps = 5/95 (5%)
Query: 66 GVKEKPKKLPRSRPKLTPDLLLSDDGLGFVLRHFPRA-FKYRGRGHEVSDLGHLIGLYSE 124
G+K K + PR PKL D L S+ GL + + F + FK + H ++L ++ +Y
Sbjct: 38 GLKRKVIRQPR--PKLDSDRLTSERGLRALHQQFNKLHFKKKKDYH--NNLITILRIYEH 93
Query: 125 WHSHLLPYYSFDHFVSKVEQVAASRRVKMCIRDLR 159
W L P F V KVE + + + V+ + +R
Sbjct: 94 WAHRLYPKLPFVDVVHKVENLGSKKAVQYALSLIR 128
>gi|170085409|ref|XP_001873928.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164651480|gb|EDR15720.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 477
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 14/26 (53%), Positives = 19/26 (73%)
Query: 8 PTGCFKCGRPGHWSRDCPSSSSSAPS 33
P CFKCG+ GHW+R+CP+ + AP
Sbjct: 202 PGACFKCGQMGHWARECPNHTGLAPQ 227
>gi|145552234|ref|XP_001461793.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124429629|emb|CAK94420.1| unnamed protein product [Paramecium tetraurelia]
Length = 186
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 12/15 (80%), Positives = 14/15 (93%)
Query: 11 CFKCGRPGHWSRDCP 25
CFKCG+ GHW+RDCP
Sbjct: 93 CFKCGKGGHWARDCP 107
>gi|15982739|gb|AAL09710.1| AT3g26420/F20C19_14 [Arabidopsis thaliana]
gi|19699180|gb|AAL90956.1| AT3g26420/F20C19_14 [Arabidopsis thaliana]
Length = 148
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 14/19 (73%), Positives = 18/19 (94%)
Query: 11 CFKCGRPGHWSRDCPSSSS 29
CFKCG+PGH++R+CPS SS
Sbjct: 120 CFKCGKPGHFARECPSESS 138
>gi|114052178|ref|NP_001039393.1| RNA-binding protein 4B [Bos taurus]
gi|86438058|gb|AAI12498.1| RNA binding motif protein 4B [Bos taurus]
gi|296471585|tpg|DAA13700.1| TPA: RNA binding motif protein 4B [Bos taurus]
Length = 359
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 11/21 (52%), Positives = 17/21 (80%)
Query: 9 TGCFKCGRPGHWSRDCPSSSS 29
+GC++CG+ GHWS++CP S
Sbjct: 160 SGCYRCGKEGHWSKECPVDRS 180
>gi|353232304|emb|CCD79659.1| putative cellular nucleic acid binding protein [Schistosoma
mansoni]
Length = 184
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 12/17 (70%), Positives = 16/17 (94%)
Query: 11 CFKCGRPGHWSRDCPSS 27
CFKCGRPGH++RDC ++
Sbjct: 5 CFKCGRPGHYARDCQAA 21
>gi|222624079|gb|EEE58211.1| hypothetical protein OsJ_09170 [Oryza sativa Japonica Group]
Length = 409
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 21/44 (47%), Gaps = 7/44 (15%)
Query: 11 CFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASGGGGGGSGVG 54
CF CG+ GHW++DCP S N GGG SG G
Sbjct: 40 CFVCGKSGHWAKDCPERKDR-------KSANMVISEGGGTSGYG 76
>gi|51038150|gb|AAT93953.1| hypothetical protein [Oryza sativa Japonica Group]
gi|51038210|gb|AAT94013.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 457
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Query: 11 CFKCGRPGHWSRDCPSSSS-SAPSNSNFPSNNTASGGGGGGSG 52
CF CG+PG+ +R CP AP+ S N G G GSG
Sbjct: 331 CFVCGQPGYLARKCPQRKGMKAPAGQTSKSANVTIGNTGDGSG 373
>gi|116308878|emb|CAH66013.1| OSIGBa0093M15.3 [Oryza sativa Indica Group]
Length = 1317
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 9/65 (13%)
Query: 6 AAPTGCFKCGRPGHWSRDCPS----SSSSAPSNSNFPS-----NNTASGGGGGGSGVGDG 56
+ P CF CG PGH++ CP ++ AP+NSN P+ N+ A+ V G
Sbjct: 315 SKPVICFNCGDPGHYADKCPKPRRVKNAPAPNNSNAPAPKARVNHVAAAEAQNAPDVVLG 374
Query: 57 GVSVS 61
V+
Sbjct: 375 TFPVN 379
>gi|126338772|ref|XP_001364800.1| PREDICTED: RNA-binding protein 4B-like [Monodelphis domestica]
Length = 365
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 10/17 (58%), Positives = 16/17 (94%)
Query: 9 TGCFKCGRPGHWSRDCP 25
+GC++CG+ GHWS++CP
Sbjct: 160 SGCYRCGKEGHWSKECP 176
>gi|354496142|ref|XP_003510186.1| PREDICTED: RNA-binding protein 4B [Cricetulus griseus]
gi|344250269|gb|EGW06373.1| RNA-binding protein 4B [Cricetulus griseus]
Length = 357
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 11/21 (52%), Positives = 17/21 (80%)
Query: 9 TGCFKCGRPGHWSRDCPSSSS 29
+GC++CG+ GHWS++CP S
Sbjct: 160 SGCYRCGKEGHWSKECPVDRS 180
>gi|242092812|ref|XP_002436896.1| hypothetical protein SORBIDRAFT_10g010785 [Sorghum bicolor]
gi|241915119|gb|EER88263.1| hypothetical protein SORBIDRAFT_10g010785 [Sorghum bicolor]
Length = 654
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
Query: 4 AKAAPTGCFKCGRPGHWSRDCPSSSSSAPSNSNFPSN-NTASGGGGGGSGVGDG 56
A PT CF CG+ GH S DCP + P N+N S N+A V +G
Sbjct: 295 ASNTPTRCFHCGKEGHMSYDCPEKFN--PQNNNRRSTPNSAKVNNVAAETVQEG 346
>gi|4539660|gb|AAD22153.1|AF061282_6 polyprotein [Sorghum bicolor]
Length = 1484
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 9/66 (13%)
Query: 3 NAKAAPTGCFKCGRPGHWSRDCP-------SSSSSAPSNSNFPSNNTASGGGGGGSGVGD 55
+A PT CF+CG+ GH S DCP + S P+++ NN A+ G +
Sbjct: 329 SASNTPTRCFRCGKEGHMSYDCPEKFNPQYNDRRSTPNSAKV--NNVAAETVQEGPEIMM 386
Query: 56 GGVSVS 61
G S++
Sbjct: 387 GTFSIN 392
>gi|34495359|gb|AAQ73500.1| zinc responsive protein ZD7 [Rattus norvegicus]
Length = 357
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 10/17 (58%), Positives = 16/17 (94%)
Query: 9 TGCFKCGRPGHWSRDCP 25
+GC++CG+ GHWS++CP
Sbjct: 160 SGCYRCGKEGHWSKECP 176
>gi|57099639|ref|XP_533216.1| PREDICTED: RNA-binding protein 4B isoform 1 [Canis lupus
familiaris]
Length = 359
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 10/17 (58%), Positives = 16/17 (94%)
Query: 9 TGCFKCGRPGHWSRDCP 25
+GC++CG+ GHWS++CP
Sbjct: 160 SGCYRCGKEGHWSKECP 176
>gi|395851691|ref|XP_003798386.1| PREDICTED: RNA-binding protein 4 [Otolemur garnettii]
Length = 365
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 10/17 (58%), Positives = 16/17 (94%)
Query: 9 TGCFKCGRPGHWSRDCP 25
+GC++CG+ GHWS++CP
Sbjct: 160 SGCYRCGKEGHWSKECP 176
>gi|301784857|ref|XP_002927839.1| PREDICTED: RNA-binding protein 4B-like [Ailuropoda melanoleuca]
gi|281346283|gb|EFB21867.1| hypothetical protein PANDA_017683 [Ailuropoda melanoleuca]
Length = 359
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 10/17 (58%), Positives = 16/17 (94%)
Query: 9 TGCFKCGRPGHWSRDCP 25
+GC++CG+ GHWS++CP
Sbjct: 160 SGCYRCGKEGHWSKECP 176
>gi|260408201|gb|ACX37415.1| vasa [Botryllus schlosseri]
Length = 655
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 23/48 (47%), Gaps = 7/48 (14%)
Query: 8 PTGCFKCGRPGHWSRDCPSSSSSAPSNSNFP-------SNNTASGGGG 48
P GCFKCG GH SR+CPS + F S +GGGG
Sbjct: 75 PKGCFKCGEEGHMSRECPSGGGDSRPKGCFKCGEEGHMSRECPTGGGG 122
Score = 36.6 bits (83), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 13/19 (68%), Positives = 15/19 (78%)
Query: 8 PTGCFKCGRPGHWSRDCPS 26
P GCFKCG GH SR+CP+
Sbjct: 126 PKGCFKCGEEGHMSRECPN 144
>gi|116308973|emb|CAH66097.1| OSIGBa0114I04.4 [Oryza sativa Indica Group]
Length = 1455
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 9/65 (13%)
Query: 6 AAPTGCFKCGRPGHWSRDCPS----SSSSAPSNSNFPS-----NNTASGGGGGGSGVGDG 56
+ P CF CG PGH++ CP + AP+NSN P+ N+ A+ V G
Sbjct: 317 SKPVICFNCGDPGHYADKCPKPRCVKNVPAPNNSNVPAPKARVNHVAAAEAQNAPDVVLG 376
Query: 57 GVSVS 61
V+
Sbjct: 377 TFPVN 381
>gi|126723790|ref|NP_001075548.1| RNA-binding protein 4 [Oryctolagus cuniculus]
gi|62511088|sp|Q9BDY9.1|RBM4_RABIT RecName: Full=RNA-binding protein 4; AltName: Full=Lark homolog;
AltName: Full=RNA-binding motif protein 4
gi|13182931|gb|AAK14991.1|AF233063_1 RNA-binding protein lark [Oryctolagus cuniculus]
Length = 359
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 10/17 (58%), Positives = 16/17 (94%)
Query: 9 TGCFKCGRPGHWSRDCP 25
+GC++CG+ GHWS++CP
Sbjct: 160 SGCYRCGKEGHWSKECP 176
>gi|432091077|gb|ELK24289.1| RNA-binding protein 4 [Myotis davidii]
Length = 382
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 10/17 (58%), Positives = 16/17 (94%)
Query: 9 TGCFKCGRPGHWSRDCP 25
+GC++CG+ GHWS++CP
Sbjct: 160 SGCYRCGKEGHWSKECP 176
>gi|357119205|ref|XP_003561336.1| PREDICTED: uncharacterized protein LOC100827239 [Brachypodium
distachyon]
Length = 314
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 25/42 (59%), Gaps = 8/42 (19%)
Query: 11 CFKCGRPGHWSRDC--PSSSSSAPSNSNFPSNNTASGGGGGG 50
C++CGR GHW+RDC P+ S +S F SGGGG G
Sbjct: 120 CYQCGRAGHWARDCPNPAGGRSGQLSSKF------SGGGGRG 155
>gi|55926188|ref|NP_001007015.2| RNA-binding protein 4B [Rattus norvegicus]
gi|62510948|sp|Q64LC9.2|RBM4B_RAT RecName: Full=RNA-binding protein 4B; AltName: Full=RNA-binding
motif protein 30; AltName: Full=RNA-binding motif
protein 4B; AltName: Full=RNA-binding protein 30;
AltName: Full=Zinc-responsive protein ZD7
gi|55562771|gb|AAH86416.1| RNA binding motif protein 4B [Rattus norvegicus]
gi|149061999|gb|EDM12422.1| rCG48244, isoform CRA_a [Rattus norvegicus]
gi|149062000|gb|EDM12423.1| rCG48244, isoform CRA_a [Rattus norvegicus]
Length = 357
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 10/17 (58%), Positives = 16/17 (94%)
Query: 9 TGCFKCGRPGHWSRDCP 25
+GC++CG+ GHWS++CP
Sbjct: 160 SGCYRCGKEGHWSKECP 176
>gi|115454617|ref|NP_001050909.1| Os03g0681900 [Oryza sativa Japonica Group]
gi|31712074|gb|AAP68379.1| putative RNA-binding protein [Oryza sativa Japonica Group]
gi|108710427|gb|ABF98222.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113549380|dbj|BAF12823.1| Os03g0681900 [Oryza sativa Japonica Group]
gi|215692670|dbj|BAG88090.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215692827|dbj|BAG88216.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222625569|gb|EEE59701.1| hypothetical protein OsJ_12125 [Oryza sativa Japonica Group]
Length = 308
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
Query: 11 CFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASGGGG 48
CF+CGR GHW+RDCP+ ++ + S+ ++GG G
Sbjct: 116 CFECGRAGHWARDCPNPGGG--RSARYSSSKFSAGGRG 151
>gi|27754120|ref|NP_079993.2| RNA-binding protein 4B [Mus musculus]
gi|62511125|sp|Q8VE92.1|RBM4B_MOUSE RecName: Full=RNA-binding protein 4B; AltName: Full=RNA-binding
motif protein 30; AltName: Full=RNA-binding motif
protein 4B; AltName: Full=RNA-binding protein 30
gi|18044496|gb|AAH19488.1| RNA binding motif protein 4B [Mus musculus]
gi|148701119|gb|EDL33066.1| mCG8380, isoform CRA_a [Mus musculus]
gi|148701120|gb|EDL33067.1| mCG8380, isoform CRA_a [Mus musculus]
Length = 357
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 10/17 (58%), Positives = 16/17 (94%)
Query: 9 TGCFKCGRPGHWSRDCP 25
+GC++CG+ GHWS++CP
Sbjct: 160 SGCYRCGKEGHWSKECP 176
>gi|431910216|gb|ELK13289.1| RNA-binding protein 4B [Pteropus alecto]
Length = 359
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 10/17 (58%), Positives = 16/17 (94%)
Query: 9 TGCFKCGRPGHWSRDCP 25
+GC++CG+ GHWS++CP
Sbjct: 160 SGCYRCGKEGHWSKECP 176
>gi|410974612|ref|XP_003993737.1| PREDICTED: RNA-binding protein 4B [Felis catus]
Length = 359
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 10/17 (58%), Positives = 16/17 (94%)
Query: 9 TGCFKCGRPGHWSRDCP 25
+GC++CG+ GHWS++CP
Sbjct: 160 SGCYRCGKEGHWSKECP 176
>gi|218193515|gb|EEC75942.1| hypothetical protein OsI_13038 [Oryza sativa Indica Group]
Length = 261
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
Query: 11 CFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASGGGG 48
CF+CGR GHW+RDCP+ ++ + S+ ++GG G
Sbjct: 116 CFECGRAGHWARDCPNPGGG--RSARYSSSKFSAGGRG 151
>gi|381217965|gb|AFG17059.1| vasa [Urechis unicinctus]
Length = 773
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 19/34 (55%), Gaps = 8/34 (23%)
Query: 11 CFKCGRPGHWSRDCPSS--------SSSAPSNSN 36
CFKCG GH SRDCPS SS AP NS
Sbjct: 195 CFKCGEEGHMSRDCPSGGGGGASRPSSGAPINSE 228
>gi|344295811|ref|XP_003419604.1| PREDICTED: RNA-binding protein 4B-like [Loxodonta africana]
Length = 359
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 10/17 (58%), Positives = 16/17 (94%)
Query: 9 TGCFKCGRPGHWSRDCP 25
+GC++CG+ GHWS++CP
Sbjct: 160 SGCYRCGKEGHWSKECP 176
>gi|326533496|dbj|BAK05279.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1027
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 21/29 (72%)
Query: 3 NAKAAPTGCFKCGRPGHWSRDCPSSSSSA 31
NA A CFKC +PGH+SRDCP ++++
Sbjct: 906 NANANSGLCFKCNQPGHFSRDCPGQAANS 934
>gi|158259071|dbj|BAF85494.1| unnamed protein product [Homo sapiens]
Length = 364
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 10/17 (58%), Positives = 16/17 (94%)
Query: 9 TGCFKCGRPGHWSRDCP 25
+GC++CG+ GHWS++CP
Sbjct: 160 SGCYRCGKEGHWSKECP 176
>gi|403301169|ref|XP_003941271.1| PREDICTED: RNA-binding protein 4B [Saimiri boliviensis boliviensis]
Length = 359
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 10/17 (58%), Positives = 16/17 (94%)
Query: 9 TGCFKCGRPGHWSRDCP 25
+GC++CG+ GHWS++CP
Sbjct: 160 SGCYRCGKEGHWSKECP 176
>gi|332249630|ref|XP_003273961.1| PREDICTED: RNA-binding protein 4B isoform 1 [Nomascus leucogenys]
Length = 359
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 10/17 (58%), Positives = 16/17 (94%)
Query: 9 TGCFKCGRPGHWSRDCP 25
+GC++CG+ GHWS++CP
Sbjct: 160 SGCYRCGKEGHWSKECP 176
>gi|296218877|ref|XP_002755613.1| PREDICTED: RNA-binding protein 4 [Callithrix jacchus]
gi|403301167|ref|XP_003941270.1| PREDICTED: RNA-binding protein 4 [Saimiri boliviensis boliviensis]
Length = 364
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 10/17 (58%), Positives = 16/17 (94%)
Query: 9 TGCFKCGRPGHWSRDCP 25
+GC++CG+ GHWS++CP
Sbjct: 160 SGCYRCGKEGHWSKECP 176
>gi|242217706|ref|XP_002474650.1| predicted protein [Postia placenta Mad-698-R]
gi|220726180|gb|EED80138.1| predicted protein [Postia placenta Mad-698-R]
Length = 425
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 44/112 (39%), Gaps = 19/112 (16%)
Query: 49 GGSGVGDGGVSVSKSAIGVKEKPKKLPRSRPKLTPDLLLSDDGLGFVLRHFPRAFKYRGR 108
SG G K K KP PKL LL DG +++ + FK +G+
Sbjct: 129 NASGAARGNSKDDKDTTEKKRKP------LPKLDEARLLGPDGFPALVKQT-KNFKPKGK 181
Query: 109 GHEVSDLGHLIGLYSEWHSHLLPYYSFDHFVSKVEQVAASRRVKMCIRDLRD 160
GHE W + P F V +VE++ S+R+ + + RD
Sbjct: 182 GHEF------------WTHRMYPKTQFRDTVQRVEKLCHSKRMHVALSVWRD 221
>gi|116309157|emb|CAH66257.1| OSIGBa0139I12.6 [Oryza sativa Indica Group]
Length = 1443
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 9/65 (13%)
Query: 6 AAPTGCFKCGRPGHWSRDCPS----SSSSAPSNSNFPS-----NNTASGGGGGGSGVGDG 56
+ P CF CG PGH++ CP + AP+NSN P+ N+ A+ V G
Sbjct: 277 SKPVICFNCGDPGHYADKCPKPRRVKNVPAPNNSNVPAPKARVNHVAAAEAQNAPDVVLG 336
Query: 57 GVSVS 61
V+
Sbjct: 337 TFPVN 341
>gi|93277122|ref|NP_002887.2| RNA-binding protein 4 isoform 1 [Homo sapiens]
gi|350539417|ref|NP_001233570.1| RNA-binding protein 4 [Pan troglodytes]
gi|332249626|ref|XP_003273959.1| PREDICTED: RNA-binding protein 4 isoform 2 [Nomascus leucogenys]
gi|397517069|ref|XP_003828742.1| PREDICTED: RNA-binding protein 4 isoform 1 [Pan paniscus]
gi|402892712|ref|XP_003909553.1| PREDICTED: RNA-binding protein 4 [Papio anubis]
gi|426369345|ref|XP_004051653.1| PREDICTED: RNA-binding protein 4 isoform 1 [Gorilla gorilla
gorilla]
gi|62511089|sp|Q9BWF3.1|RBM4_HUMAN RecName: Full=RNA-binding protein 4; AltName: Full=Lark homolog;
Short=hLark; AltName: Full=RNA-binding motif protein 4;
AltName: Full=RNA-binding motif protein 4a
gi|75077302|sp|Q4R979.1|RBM4_MACFA RecName: Full=RNA-binding protein 4; AltName: Full=RNA-binding
motif protein 4
gi|12653083|gb|AAH00307.1| RNA binding motif protein 4 [Homo sapiens]
gi|21618467|gb|AAH32735.1| RNA binding motif protein 4 [Homo sapiens]
gi|67967719|dbj|BAE00342.1| unnamed protein product [Macaca fascicularis]
gi|167774193|gb|ABZ92531.1| RNA binding motif protein 4 [synthetic construct]
gi|193783581|dbj|BAG53492.1| unnamed protein product [Homo sapiens]
gi|261859218|dbj|BAI46131.1| RNA binding motif protein 14 [synthetic construct]
gi|343958742|dbj|BAK63226.1| RNA binding motif protein 4 [Pan troglodytes]
gi|355566266|gb|EHH22645.1| RNA-binding motif protein 4 [Macaca mulatta]
gi|380784029|gb|AFE63890.1| RNA-binding protein 4 isoform 1 [Macaca mulatta]
gi|383409025|gb|AFH27726.1| RNA-binding protein 4 isoform 1 [Macaca mulatta]
gi|384942564|gb|AFI34887.1| RNA-binding protein 4 isoform 1 [Macaca mulatta]
gi|410222926|gb|JAA08682.1| RNA binding motif protein 4 [Pan troglodytes]
gi|410222932|gb|JAA08685.1| RNA binding motif protein 4 [Pan troglodytes]
gi|410222940|gb|JAA08689.1| RNA binding motif protein 4 [Pan troglodytes]
gi|410254448|gb|JAA15191.1| RNA binding motif protein 4 [Pan troglodytes]
gi|410254452|gb|JAA15193.1| RNA binding motif protein 4 [Pan troglodytes]
gi|410295006|gb|JAA26103.1| RNA binding motif protein 4 [Pan troglodytes]
gi|410352741|gb|JAA42974.1| RNA binding motif protein 4 [Pan troglodytes]
gi|410352747|gb|JAA42977.1| RNA binding motif protein 4 [Pan troglodytes]
gi|410352751|gb|JAA42979.1| RNA binding motif protein 4 [Pan troglodytes]
gi|410352753|gb|JAA42980.1| RNA binding motif protein 4 [Pan troglodytes]
Length = 364
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 10/17 (58%), Positives = 16/17 (94%)
Query: 9 TGCFKCGRPGHWSRDCP 25
+GC++CG+ GHWS++CP
Sbjct: 160 SGCYRCGKEGHWSKECP 176
>gi|13899354|ref|NP_113680.1| RNA-binding protein 4B [Homo sapiens]
gi|109105261|ref|XP_001109453.1| PREDICTED: RNA-binding protein 4B-like [Macaca mulatta]
gi|114638751|ref|XP_508578.2| PREDICTED: RNA-binding protein 4B isoform 2 [Pan troglodytes]
gi|297688065|ref|XP_002821512.1| PREDICTED: RNA-binding protein 4B [Pongo abelii]
gi|397517079|ref|XP_003828747.1| PREDICTED: RNA-binding protein 4B [Pan paniscus]
gi|402892714|ref|XP_003909554.1| PREDICTED: RNA-binding protein 4B [Papio anubis]
gi|426369353|ref|XP_004051657.1| PREDICTED: RNA-binding protein 4B isoform 1 [Gorilla gorilla
gorilla]
gi|62511129|sp|Q9BQ04.1|RBM4B_HUMAN RecName: Full=RNA-binding protein 4B; AltName: Full=RNA-binding
motif protein 30; AltName: Full=RNA-binding motif
protein 4B; AltName: Full=RNA-binding protein 30
gi|13097558|gb|AAH03503.1| RNA binding motif protein 4B [Homo sapiens]
gi|13436323|gb|AAH04951.1| RNA binding motif protein 4B [Homo sapiens]
gi|119594964|gb|EAW74558.1| RNA binding motif protein 4B [Homo sapiens]
gi|193787792|dbj|BAG52995.1| unnamed protein product [Homo sapiens]
gi|208967358|dbj|BAG73693.1| RNA binding motif protein 4B [synthetic construct]
gi|325464201|gb|ADZ15871.1| RNA binding motif protein 4B [synthetic construct]
gi|355566265|gb|EHH22644.1| RNA-binding motif protein 4B [Macaca mulatta]
gi|355751922|gb|EHH56042.1| RNA-binding motif protein 4B [Macaca fascicularis]
Length = 359
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 10/17 (58%), Positives = 16/17 (94%)
Query: 9 TGCFKCGRPGHWSRDCP 25
+GC++CG+ GHWS++CP
Sbjct: 160 SGCYRCGKEGHWSKECP 176
>gi|291385477|ref|XP_002709280.1| PREDICTED: RNA binding motif protein 4B-like [Oryctolagus
cuniculus]
Length = 365
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 10/17 (58%), Positives = 16/17 (94%)
Query: 9 TGCFKCGRPGHWSRDCP 25
+GC++CG+ GHWS++CP
Sbjct: 160 SGCYRCGKEGHWSKECP 176
>gi|258676573|gb|ACV87294.1| VASA DEAD-box protein [Phallusia mammillata]
Length = 851
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 15/24 (62%), Positives = 17/24 (70%)
Query: 8 PTGCFKCGRPGHWSRDCPSSSSSA 31
P GCFKCG GH SR+CPS S+
Sbjct: 285 PKGCFKCGEEGHMSRECPSGGDSS 308
>gi|113205432|gb|AAV31185.2| Gag-pol polyprotein, putative [Solanum tuberosum]
Length = 271
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 13/55 (23%)
Query: 7 APTGCFKCGRPGHWSRDCPSS-------------SSSAPSNSNFPSNNTASGGGG 48
A GCFKCG+ GH+ ++CP + SS AP + P +S GGG
Sbjct: 114 ARCGCFKCGQEGHFMQECPKNKQGNGNGVNRAHLSSVAPPDKALPRGAISSAGGG 168
>gi|432091076|gb|ELK24288.1| RNA-binding protein 4B [Myotis davidii]
Length = 357
Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 10/17 (58%), Positives = 16/17 (94%)
Query: 9 TGCFKCGRPGHWSRDCP 25
+GC++CG+ GHWS++CP
Sbjct: 160 SGCYRCGKEGHWSKECP 176
>gi|410222930|gb|JAA08684.1| RNA binding motif protein 4B [Pan troglodytes]
Length = 359
Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 10/17 (58%), Positives = 16/17 (94%)
Query: 9 TGCFKCGRPGHWSRDCP 25
+GC++CG+ GHWS++CP
Sbjct: 160 SGCYRCGKEGHWSKECP 176
>gi|77551574|gb|ABA94371.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1239
Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 21/44 (47%), Gaps = 7/44 (15%)
Query: 11 CFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASGGGGGGSGVG 54
CF CG+ GHW++DCP + N GGG SG G
Sbjct: 330 CFVCGKSGHWAKDCPERKDRKCA-------NMVISEGGGTSGYG 366
>gi|414878086|tpg|DAA55217.1| TPA: hypothetical protein ZEAMMB73_507954 [Zea mays]
Length = 522
Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 22/44 (50%), Gaps = 7/44 (15%)
Query: 11 CFKCGRPGHWSRDCPSSSSSAPSNSNFPS-------NNTASGGG 47
C+KC + GH SRDCP S+S N S NTA GG
Sbjct: 348 CYKCKKAGHLSRDCPESTSEVDRNDGSISRSRDDTGTNTAPAGG 391
>gi|348565071|ref|XP_003468327.1| PREDICTED: RNA-binding protein 4B-like [Cavia porcellus]
Length = 358
Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 10/17 (58%), Positives = 16/17 (94%)
Query: 9 TGCFKCGRPGHWSRDCP 25
+GC++CG+ GHWS++CP
Sbjct: 160 SGCYRCGKEGHWSKECP 176
>gi|348565067|ref|XP_003468325.1| PREDICTED: RNA-binding protein 4-like [Cavia porcellus]
Length = 365
Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 10/17 (58%), Positives = 16/17 (94%)
Query: 9 TGCFKCGRPGHWSRDCP 25
+GC++CG+ GHWS++CP
Sbjct: 160 SGCYRCGKEGHWSKECP 176
>gi|73982920|ref|XP_852303.1| PREDICTED: RNA-binding protein 4 isoform 1 [Canis lupus familiaris]
gi|301784859|ref|XP_002927840.1| PREDICTED: RNA-binding protein 4-like isoform 1 [Ailuropoda
melanoleuca]
gi|301784861|ref|XP_002927841.1| PREDICTED: RNA-binding protein 4-like isoform 2 [Ailuropoda
melanoleuca]
gi|410974610|ref|XP_003993736.1| PREDICTED: RNA-binding protein 4 [Felis catus]
gi|281346284|gb|EFB21868.1| hypothetical protein PANDA_017684 [Ailuropoda melanoleuca]
Length = 365
Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 10/17 (58%), Positives = 16/17 (94%)
Query: 9 TGCFKCGRPGHWSRDCP 25
+GC++CG+ GHWS++CP
Sbjct: 160 SGCYRCGKEGHWSKECP 176
>gi|380817026|gb|AFE80387.1| RNA-binding protein 4B [Macaca mulatta]
gi|384949730|gb|AFI38470.1| RNA-binding protein 4B [Macaca mulatta]
gi|410254450|gb|JAA15192.1| RNA binding motif protein 4B [Pan troglodytes]
gi|410295008|gb|JAA26104.1| RNA binding motif protein 4B [Pan troglodytes]
gi|410352743|gb|JAA42975.1| RNA binding motif protein 4B [Pan troglodytes]
Length = 359
Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 10/17 (58%), Positives = 16/17 (94%)
Query: 9 TGCFKCGRPGHWSRDCP 25
+GC++CG+ GHWS++CP
Sbjct: 160 SGCYRCGKEGHWSKECP 176
>gi|178056236|ref|NP_001116660.1| RNA-binding protein 4B [Sus scrofa]
gi|122131878|sp|Q06AT9.1|RBM4B_PIG RecName: Full=RNA-binding protein 4B; AltName: Full=RNA-binding
motif protein 30; AltName: Full=RNA-binding motif
protein 4B; AltName: Full=RNA-binding protein 30
gi|115394774|gb|ABI97181.1| RBM30 [Sus scrofa]
Length = 359
Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 10/17 (58%), Positives = 16/17 (94%)
Query: 9 TGCFKCGRPGHWSRDCP 25
+GC++CG+ GHWS++CP
Sbjct: 160 SGCYRCGKEGHWSKECP 176
>gi|50838985|gb|AAT81746.1| integrase core domain containing protein [Oryza sativa Japonica
Group]
gi|108708962|gb|ABF96757.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1232
Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 18/37 (48%)
Query: 11 CFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASGGG 47
CF CG+ GHW++DCP +N SG G
Sbjct: 330 CFVCGKSGHWAKDCPKRKDRKSANMVISKGGETSGYG 366
>gi|354496140|ref|XP_003510185.1| PREDICTED: RNA-binding protein 4 [Cricetulus griseus]
gi|344250268|gb|EGW06372.1| RNA-binding protein 4 [Cricetulus griseus]
Length = 360
Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 11/21 (52%), Positives = 17/21 (80%)
Query: 9 TGCFKCGRPGHWSRDCPSSSS 29
+GC++CG+ GHWS++CP S
Sbjct: 160 SGCYRCGKEGHWSKECPVDRS 180
>gi|327554933|gb|AEB00820.1| vasa-like protein [Penaeus monodon]
Length = 707
Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 23/41 (56%), Gaps = 4/41 (9%)
Query: 11 CFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASGGGGGGS 51
CFKCG GH SRDCPS+S S + +NN GG S
Sbjct: 81 CFKCGDEGHMSRDCPSASDS----RGYRTNNRRQDNWGGSS 117
Score = 37.7 bits (86), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 14/17 (82%), Positives = 14/17 (82%)
Query: 10 GCFKCGRPGHWSRDCPS 26
GCFKCG GH SRDCPS
Sbjct: 169 GCFKCGEEGHMSRDCPS 185
>gi|326528545|dbj|BAJ93454.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 371
Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 21/28 (75%)
Query: 2 ENAKAAPTGCFKCGRPGHWSRDCPSSSS 29
+N + +GCFKCG+ HW++DCP+ SS
Sbjct: 277 QNMSKSSSGCFKCGQENHWAKDCPNQSS 304
>gi|444510189|gb|ELV09524.1| RNA-binding protein 4B [Tupaia chinensis]
Length = 357
Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 10/17 (58%), Positives = 16/17 (94%)
Query: 9 TGCFKCGRPGHWSRDCP 25
+GC++CG+ GHWS++CP
Sbjct: 160 SGCYRCGKEGHWSKECP 176
>gi|431910217|gb|ELK13290.1| RNA-binding protein 4 [Pteropus alecto]
Length = 365
Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 10/17 (58%), Positives = 16/17 (94%)
Query: 9 TGCFKCGRPGHWSRDCP 25
+GC++CG+ GHWS++CP
Sbjct: 160 SGCYRCGKEGHWSKECP 176
>gi|354488556|ref|XP_003506434.1| PREDICTED: cellular nucleic acid-binding protein-like [Cricetulus
griseus]
Length = 170
Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 13/15 (86%), Positives = 15/15 (100%)
Query: 11 CFKCGRPGHWSRDCP 25
CFKCGRPGHW+R+CP
Sbjct: 6 CFKCGRPGHWARECP 20
>gi|149725616|ref|XP_001496839.1| PREDICTED: RNA-binding protein 4B-like [Equus caballus]
Length = 359
Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 10/17 (58%), Positives = 16/17 (94%)
Query: 9 TGCFKCGRPGHWSRDCP 25
+GC++CG+ GHWS++CP
Sbjct: 160 SGCYRCGKEGHWSKECP 176
>gi|149725614|ref|XP_001496788.1| PREDICTED: RNA-binding protein 4 isoform 1 [Equus caballus]
gi|338712238|ref|XP_003362679.1| PREDICTED: RNA-binding protein 4 isoform 2 [Equus caballus]
Length = 361
Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 10/17 (58%), Positives = 16/17 (94%)
Query: 9 TGCFKCGRPGHWSRDCP 25
+GC++CG+ GHWS++CP
Sbjct: 160 SGCYRCGKEGHWSKECP 176
>gi|326417096|gb|ADZ73390.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 35/75 (46%), Gaps = 10/75 (13%)
Query: 10 GCFKCGRPGHWSRDCPSSSSS-----APSNS----NFP-SNNTASGGGGGGSGVGDGGVS 59
GC+KCG+ GH +DC ++ PSN NFP S S G+G+GG S
Sbjct: 410 GCWKCGKEGHQMKDCTERQANFLGKIWPSNKGRPGNFPQSRPEPSAPPAENWGMGEGGTS 469
Query: 60 VSKSAIGVKEKPKKL 74
+ K KE P L
Sbjct: 470 LPKQEQKDKEHPPPL 484
>gi|406507553|gb|AFS34620.1| lark, partial [Clunio marinus]
Length = 285
Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 11/18 (61%), Positives = 15/18 (83%)
Query: 8 PTGCFKCGRPGHWSRDCP 25
P C++CGR GHWS++CP
Sbjct: 171 PESCYRCGRTGHWSKECP 188
>gi|108708194|gb|ABF95989.1| retrotransposon protein, putative, Ty3-gypsy subclass, expressed
[Oryza sativa Japonica Group]
Length = 1305
Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 4/38 (10%)
Query: 6 AAPTGCFKCGRPGHWSRDCPS----SSSSAPSNSNFPS 39
+ P CF CG PGH++ CP + AP+NSN P+
Sbjct: 275 SKPVICFNCGDPGHYADKCPKPRRVKNVPAPNNSNVPA 312
>gi|38346266|emb|CAD39659.2| OSJNBa0074B10.16 [Oryza sativa Japonica Group]
Length = 1006
Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 7/45 (15%)
Query: 11 CFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASGGGGGGSGVGD 55
CF CG+PGHW+++CP S N GGG S G+
Sbjct: 326 CFVCGKPGHWAKNCPDRKDKK-------SANMVISEGGGTSRYGN 363
>gi|312283439|dbj|BAJ34585.1| unnamed protein product [Thellungiella halophila]
Length = 259
Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 22/35 (62%)
Query: 11 CFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASG 45
CFKCG+PGH++R+CPS +S ++ SG
Sbjct: 124 CFKCGKPGHFARECPSETSRGGGGRYSGKDDRYSG 158
>gi|86262144|ref|NP_033058.2| RNA-binding protein 4 [Mus musculus]
gi|62511057|sp|Q8C7Q4.1|RBM4_MOUSE RecName: Full=RNA-binding protein 4; AltName: Full=Lark homolog;
Short=mLark; AltName: Full=RNA-binding motif protein 4;
AltName: Full=RNA-binding motif protein 4a
gi|26340398|dbj|BAC33862.1| unnamed protein product [Mus musculus]
gi|148701113|gb|EDL33060.1| mCG8382, isoform CRA_a [Mus musculus]
gi|219520483|gb|AAI44950.1| RNA binding motif protein 4 [Mus musculus]
Length = 361
Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 10/17 (58%), Positives = 16/17 (94%)
Query: 9 TGCFKCGRPGHWSRDCP 25
+GC++CG+ GHWS++CP
Sbjct: 160 SGCYRCGKEGHWSKECP 176
>gi|426252104|ref|XP_004019758.1| PREDICTED: RNA-binding protein 4B isoform 1 [Ovis aries]
Length = 365
Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 11/21 (52%), Positives = 17/21 (80%)
Query: 9 TGCFKCGRPGHWSRDCPSSSS 29
+GC++CG+ GHWS++CP S
Sbjct: 160 SGCYRCGKEGHWSKECPVDRS 180
>gi|395851687|ref|XP_003798384.1| PREDICTED: RNA-binding protein 4B [Otolemur garnettii]
Length = 359
Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 10/17 (58%), Positives = 16/17 (94%)
Query: 9 TGCFKCGRPGHWSRDCP 25
+GC++CG+ GHWS++CP
Sbjct: 160 SGCYRCGKEGHWSKECP 176
>gi|395544458|ref|XP_003774127.1| PREDICTED: RNA-binding protein 4 [Sarcophilus harrisii]
Length = 364
Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 10/17 (58%), Positives = 16/17 (94%)
Query: 9 TGCFKCGRPGHWSRDCP 25
+GC++CG+ GHWS++CP
Sbjct: 160 SGCYRCGKEGHWSKECP 176
>gi|297267337|ref|XP_001109416.2| PREDICTED: RNA-binding protein 4 isoform 5 [Macaca mulatta]
Length = 693
Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 10/17 (58%), Positives = 16/17 (94%)
Query: 9 TGCFKCGRPGHWSRDCP 25
+GC++CG+ GHWS++CP
Sbjct: 489 SGCYRCGKEGHWSKECP 505
>gi|145546793|ref|XP_001459079.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124426902|emb|CAK91682.1| unnamed protein product [Paramecium tetraurelia]
Length = 192
Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 21/32 (65%), Gaps = 6/32 (18%)
Query: 1 MENAKAAPTG------CFKCGRPGHWSRDCPS 26
++N K+ TG CFKC + GHW+RDCP+
Sbjct: 77 VDNRKSRKTGPSDSDLCFKCNKGGHWARDCPN 108
>gi|178056229|ref|NP_001116659.1| RNA-binding protein 4 [Sus scrofa]
gi|115394772|gb|ABI97180.1| RBM4 [Sus scrofa]
Length = 365
Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 10/17 (58%), Positives = 16/17 (94%)
Query: 9 TGCFKCGRPGHWSRDCP 25
+GC++CG+ GHWS++CP
Sbjct: 160 SGCYRCGKEGHWSKECP 176
>gi|297815424|ref|XP_002875595.1| zinc knuckle family protein [Arabidopsis lyrata subsp. lyrata]
gi|297321433|gb|EFH51854.1| zinc knuckle family protein [Arabidopsis lyrata subsp. lyrata]
Length = 337
Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 25/37 (67%), Gaps = 6/37 (16%)
Query: 4 AKAAPTG--CFKCGRPGHWSRDCPSSSSSAPSNSNFP 38
AK+ +G C+KCG+PGHW+RDC +SA +N P
Sbjct: 298 AKSTTSGGDCYKCGKPGHWARDC----TSAAQTTNTP 330
>gi|120577684|gb|AAI30257.1| RNA binding motif protein 4 [Mus musculus]
Length = 361
Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 10/17 (58%), Positives = 16/17 (94%)
Query: 9 TGCFKCGRPGHWSRDCP 25
+GC++CG+ GHWS++CP
Sbjct: 160 SGCYRCGKEGHWSKECP 176
>gi|116004239|ref|NP_001070478.1| RNA-binding protein 4 [Bos taurus]
gi|91207336|sp|Q3MHX3.1|RBM4_BOVIN RecName: Full=RNA-binding protein 4; AltName: Full=RNA-binding
motif protein 4; AltName: Full=RNA-binding motif protein
4a
gi|75775098|gb|AAI04571.1| RNA binding motif protein 4 [Bos taurus]
gi|146231708|gb|ABQ12929.1| RNA binding motif protein 4 [Bos taurus]
gi|296471486|tpg|DAA13601.1| TPA: RNA-binding protein 4 [Bos taurus]
gi|440899389|gb|ELR50692.1| RNA-binding protein 4 [Bos grunniens mutus]
Length = 362
Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 11/21 (52%), Positives = 17/21 (80%)
Query: 9 TGCFKCGRPGHWSRDCPSSSS 29
+GC++CG+ GHWS++CP S
Sbjct: 160 SGCYRCGKEGHWSKECPVDRS 180
>gi|218197570|gb|EEC79997.1| hypothetical protein OsI_21648 [Oryza sativa Indica Group]
Length = 382
Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 21/44 (47%), Gaps = 7/44 (15%)
Query: 11 CFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASGGGGGGSGVG 54
CF CG+ GHW++DCP S N GGG SG G
Sbjct: 167 CFVCGKSGHWAKDCPERKDR-------KSANMVISEGGGTSGYG 203
>gi|218195961|gb|EEC78388.1| hypothetical protein OsI_18166 [Oryza sativa Indica Group]
Length = 988
Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 11 CFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASGGGGGGSGVG 54
CFKC +PGH++RDCP S+ A + + +N AS G S VG
Sbjct: 944 CFKCKQPGHFARDCPGQSTGA-QHQTYGNNVAASRGYNRQSFVG 986
Score = 37.7 bits (86), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 13/19 (68%), Positives = 16/19 (84%)
Query: 11 CFKCGRPGHWSRDCPSSSS 29
CFKC +PGH+SRDCP S+
Sbjct: 921 CFKCKQPGHFSRDCPVQST 939
>gi|116317882|emb|CAH65910.1| OSIGBa0102O13.1 [Oryza sativa Indica Group]
Length = 1332
Score = 38.5 bits (88), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 9/65 (13%)
Query: 6 AAPTGCFKCGRPGHWSRDCPS----SSSSAPSNSNFPS-----NNTASGGGGGGSGVGDG 56
+ P CF CG PGH++ CP + AP+NSN P+ N+ A+ V G
Sbjct: 295 SKPVICFNCGDPGHYADKCPKPRRVKNVPAPNNSNVPAPKARVNHVAAAEAQNAPDVVLG 354
Query: 57 GVSVS 61
V+
Sbjct: 355 TFPVN 359
>gi|145500822|ref|XP_001436394.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124403533|emb|CAK68997.1| unnamed protein product [Paramecium tetraurelia]
Length = 204
Score = 38.5 bits (88), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 12/19 (63%), Positives = 17/19 (89%)
Query: 11 CFKCGRPGHWSRDCPSSSS 29
CFKCG+ GHW+R+CP+ +S
Sbjct: 93 CFKCGQGGHWARECPNRTS 111
>gi|77549443|gb|ABA92240.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1319
Score = 38.5 bits (88), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 9/65 (13%)
Query: 6 AAPTGCFKCGRPGHWSRDCPS----SSSSAPSNSNFPS-----NNTASGGGGGGSGVGDG 56
+ P CF CG PGH++ CP ++ AP+NSN P+ N+ A+ V G
Sbjct: 315 SKPGVCFNCGDPGHYADKCPKPRRVKNAPAPNNSNVPAPKARVNHVAAAEAQNAPDVVLG 374
Query: 57 GVSVS 61
V+
Sbjct: 375 TFPVN 379
>gi|77551394|gb|ABA94191.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1060
Score = 38.5 bits (88), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Query: 11 CFKCGRPGHWSRDCPSSSS-SAPSNSNFPSNNTASGGGGGGSGVGDG 56
CF CG+ GH R CP AP+ S N G G GSG G
Sbjct: 209 CFVCGQVGHLDRKCPQRKGMKAPAGQTSKSANVTIGNTGDGSGYARG 255
>gi|108708179|gb|ABF95974.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1643
Score = 38.5 bits (88), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 9/65 (13%)
Query: 6 AAPTGCFKCGRPGHWSRDCPS----SSSSAPSNSNFPS-----NNTASGGGGGGSGVGDG 56
+ P CF CG PGH++ CP + AP+NSN P+ N+ A+ V G
Sbjct: 567 SKPVICFNCGDPGHYADKCPKPRRVKNVPAPNNSNVPAPKARVNHVAAAEAQNAPDVVLG 626
Query: 57 GVSVS 61
V+
Sbjct: 627 TFPVN 631
>gi|303276565|ref|XP_003057576.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226460233|gb|EEH57527.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 835
Score = 38.5 bits (88), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 12/16 (75%), Positives = 14/16 (87%)
Query: 11 CFKCGRPGHWSRDCPS 26
CFKCG GHW+RDCP+
Sbjct: 775 CFKCGESGHWARDCPT 790
Score = 38.1 bits (87), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 11/16 (68%), Positives = 15/16 (93%)
Query: 11 CFKCGRPGHWSRDCPS 26
C+KC +PGHW+RDCP+
Sbjct: 737 CYKCQQPGHWARDCPN 752
>gi|149491652|ref|XP_001512914.1| PREDICTED: RNA-binding protein 4B-like isoform 1 [Ornithorhynchus
anatinus]
Length = 365
Score = 38.5 bits (88), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 10/17 (58%), Positives = 16/17 (94%)
Query: 9 TGCFKCGRPGHWSRDCP 25
+GC++CG+ GHWS++CP
Sbjct: 160 SGCYRCGKEGHWSKECP 176
>gi|67972044|dbj|BAE02364.1| unnamed protein product [Macaca fascicularis]
Length = 242
Score = 38.5 bits (88), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 10/17 (58%), Positives = 16/17 (94%)
Query: 9 TGCFKCGRPGHWSRDCP 25
+GC++CG+ GHWS++CP
Sbjct: 43 SGCYRCGKEGHWSKECP 59
>gi|449456771|ref|XP_004146122.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Cucumis sativus]
Length = 861
Score = 38.5 bits (88), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 5/39 (12%)
Query: 3 NAKAAPTG-----CFKCGRPGHWSRDCPSSSSSAPSNSN 36
N + P+G CFKC + GHW+RDCP ++ P+ N
Sbjct: 817 NQASGPSGGTSGECFKCHQTGHWARDCPGLANVPPAYGN 855
>gi|282165770|ref|NP_001163955.1| RNA binding motif protein 4 [Rattus norvegicus]
gi|149061994|gb|EDM12417.1| rCG48334, isoform CRA_b [Rattus norvegicus]
Length = 365
Score = 38.5 bits (88), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 10/17 (58%), Positives = 16/17 (94%)
Query: 9 TGCFKCGRPGHWSRDCP 25
+GC++CG+ GHWS++CP
Sbjct: 160 SGCYRCGKEGHWSKECP 176
>gi|440794050|gb|ELR15221.1| DWNN domain containing protein [Acanthamoeba castellanii str. Neff]
Length = 983
Score = 38.5 bits (88), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 13/16 (81%), Positives = 14/16 (87%)
Query: 10 GCFKCGRPGHWSRDCP 25
GCFKCG PGH +RDCP
Sbjct: 441 GCFKCGEPGHIARDCP 456
>gi|145525601|ref|XP_001448617.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124416172|emb|CAK81220.1| unnamed protein product [Paramecium tetraurelia]
Length = 192
Score = 38.5 bits (88), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 21/32 (65%), Gaps = 6/32 (18%)
Query: 1 MENAKAAPTG------CFKCGRPGHWSRDCPS 26
++N K+ TG CFKC + GHW+RDCP+
Sbjct: 77 VDNRKSRKTGPSDSDLCFKCSKGGHWARDCPN 108
>gi|296218879|ref|XP_002755663.1| PREDICTED: RNA-binding protein 4B [Callithrix jacchus]
Length = 372
Score = 38.5 bits (88), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 10/17 (58%), Positives = 16/17 (94%)
Query: 9 TGCFKCGRPGHWSRDCP 25
+GC++CG+ GHWS++CP
Sbjct: 173 SGCYRCGKEGHWSKECP 189
>gi|351710884|gb|EHB13803.1| RNA-binding protein 4 [Heterocephalus glaber]
Length = 318
Score = 38.5 bits (88), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 11/21 (52%), Positives = 17/21 (80%)
Query: 9 TGCFKCGRPGHWSRDCPSSSS 29
+GC++CG+ GHWS++CP S
Sbjct: 160 SGCYRCGKEGHWSKECPVDRS 180
>gi|320169407|gb|EFW46306.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 200
Score = 38.5 bits (88), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 18/25 (72%)
Query: 2 ENAKAAPTGCFKCGRPGHWSRDCPS 26
+N A CF+C +PGHW++DCP+
Sbjct: 76 QNRSADSDSCFRCNKPGHWAKDCPN 100
>gi|389737842|gb|EIM79061.1| hypothetical protein STEHIDRAFT_164046 [Stereum hirsutum FP-91666
SS1]
gi|389746815|gb|EIM87994.1| hypothetical protein STEHIDRAFT_155353 [Stereum hirsutum FP-91666
SS1]
gi|389750452|gb|EIM91623.1| hypothetical protein STEHIDRAFT_153249 [Stereum hirsutum FP-91666
SS1]
Length = 1444
Score = 38.5 bits (88), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 11/18 (61%), Positives = 13/18 (72%)
Query: 8 PTGCFKCGRPGHWSRDCP 25
P C+ CG+ GHW RDCP
Sbjct: 808 PNACYNCGKLGHWGRDCP 825
>gi|218194360|gb|EEC76787.1| hypothetical protein OsI_14890 [Oryza sativa Indica Group]
Length = 330
Score = 38.5 bits (88), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 21/44 (47%), Gaps = 7/44 (15%)
Query: 11 CFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASGGGGGGSGVG 54
CF CG+ GHW++DCP S N GGG SG G
Sbjct: 143 CFVCGKSGHWAKDCPERKDR-------KSANMVISEGGGTSGYG 179
>gi|31126695|gb|AAP44618.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1494
Score = 38.5 bits (88), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 18/37 (48%)
Query: 11 CFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASGGG 47
CF CG+ GHW++DCP +N SG G
Sbjct: 721 CFVCGKSGHWAKDCPERKDRKSANMVISEGRGTSGYG 757
>gi|302780311|ref|XP_002971930.1| hypothetical protein SELMODRAFT_172546 [Selaginella moellendorffii]
gi|300160229|gb|EFJ26847.1| hypothetical protein SELMODRAFT_172546 [Selaginella moellendorffii]
Length = 173
Score = 38.5 bits (88), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 26/51 (50%), Gaps = 13/51 (25%)
Query: 7 APTGCFKCGRPGHWSRDCP-----------SSSSSAPSNSNFPSNNTASGG 46
A CFKCG GHW+RDCP S S P + PSN +++GG
Sbjct: 119 ASGNCFKCGNKGHWARDCPENGGDRYGSRDSGRRSGPYDR--PSNRSSNGG 167
>gi|6683623|dbj|BAA89271.1| Gag [Alternaria alternata]
Length = 406
Score = 38.5 bits (88), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 18/25 (72%)
Query: 4 AKAAPTGCFKCGRPGHWSRDCPSSS 28
K AP C+ CG+PGH +RDC S++
Sbjct: 349 TKRAPLTCYSCGKPGHIARDCQSTT 373
>gi|21671891|gb|AAM74253.1|AC074355_15 Putative retroelement [Oryza sativa Japonica Group]
gi|31430430|gb|AAP52347.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1140
Score = 38.5 bits (88), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 9/65 (13%)
Query: 6 AAPTGCFKCGRPGHWSRDCPS----SSSSAPSNSNFPS-----NNTASGGGGGGSGVGDG 56
+ P CF CG PGH++ CP ++ P+NSN P+ N+ A+ V G
Sbjct: 177 SKPVICFNCGDPGHYADKCPKPRRVKNAPTPNNSNVPAPKARVNHVAAAEAQNAPDVVLG 236
Query: 57 GVSVS 61
V+
Sbjct: 237 TFPVN 241
>gi|116309194|emb|CAH66289.1| OSIGBa0161P06.6 [Oryza sativa Indica Group]
Length = 1433
Score = 38.5 bits (88), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 9/65 (13%)
Query: 6 AAPTGCFKCGRPGHWSRDCPS----SSSSAPSNSNFPS-----NNTASGGGGGGSGVGDG 56
+ P CF CG PGH++ CP ++ P+NSN P+ N+ A+ V G
Sbjct: 315 SKPVICFNCGDPGHYADKCPKPRRVKNAPVPNNSNVPAPKARVNHVAAAEAQNAPDVVLG 374
Query: 57 GVSVS 61
V+
Sbjct: 375 TFPVN 379
>gi|115470953|ref|NP_001059075.1| Os07g0187300 [Oryza sativa Japonica Group]
gi|33146923|dbj|BAC79944.1| glycine-rich RNA-binding protein-like [Oryza sativa Japonica Group]
gi|50509452|dbj|BAD31070.1| glycine-rich RNA-binding protein-like [Oryza sativa Japonica Group]
gi|113610611|dbj|BAF20989.1| Os07g0187300 [Oryza sativa Japonica Group]
gi|222636576|gb|EEE66708.1| hypothetical protein OsJ_23377 [Oryza sativa Japonica Group]
Length = 308
Score = 38.5 bits (88), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 12/15 (80%), Positives = 14/15 (93%)
Query: 11 CFKCGRPGHWSRDCP 25
CFKCGR GHW+R+CP
Sbjct: 127 CFKCGRAGHWARECP 141
>gi|363746234|ref|XP_003643577.1| PREDICTED: RNA-binding protein 4B-like, partial [Gallus gallus]
Length = 242
Score = 38.5 bits (88), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 10/17 (58%), Positives = 16/17 (94%)
Query: 9 TGCFKCGRPGHWSRDCP 25
+GC++CG+ GHWS++CP
Sbjct: 160 SGCYRCGKEGHWSKECP 176
>gi|327289700|ref|XP_003229562.1| PREDICTED: RNA-binding protein 4B-like [Anolis carolinensis]
Length = 354
Score = 38.5 bits (88), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 10/17 (58%), Positives = 16/17 (94%)
Query: 9 TGCFKCGRPGHWSRDCP 25
+GC++CG+ GHWS++CP
Sbjct: 160 SGCYRCGKEGHWSKECP 176
>gi|225466079|ref|XP_002264670.1| PREDICTED: uncharacterized protein LOC100245024 [Vitis vinifera]
gi|296084189|emb|CBI24577.3| unnamed protein product [Vitis vinifera]
Length = 296
Score = 38.5 bits (88), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 13/17 (76%), Positives = 16/17 (94%)
Query: 11 CFKCGRPGHWSRDCPSS 27
C+KCG+PGHW+RDC SS
Sbjct: 271 CYKCGKPGHWARDCSSS 287
>gi|242081169|ref|XP_002445353.1| hypothetical protein SORBIDRAFT_07g011900 [Sorghum bicolor]
gi|241941703|gb|EES14848.1| hypothetical protein SORBIDRAFT_07g011900 [Sorghum bicolor]
Length = 1488
Score = 38.5 bits (88), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 11/38 (28%)
Query: 11 CFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASGGGG 48
CF C + GHW+RDCP +P N A+GG
Sbjct: 268 CFNCKQVGHWARDCP-----------YPKRNAAAGGNN 294
>gi|108708842|gb|ABF96637.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1543
Score = 38.5 bits (88), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 18/37 (48%)
Query: 11 CFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASGGG 47
CF CG+ GHW++DCP +N SG G
Sbjct: 744 CFVCGKSGHWAKDCPERKDRKSANMVISEGRGTSGYG 780
>gi|37718821|gb|AAR01692.1| putative gag and pol polyprotein [Oryza sativa Japonica Group]
Length = 1427
Score = 38.5 bits (88), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 18/37 (48%)
Query: 11 CFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASGGG 47
CF CG+ GHW++DCP +N SG G
Sbjct: 721 CFVCGKSGHWAKDCPERKDRKSANMVISEGRGTSGYG 757
>gi|426252100|ref|XP_004019756.1| PREDICTED: RNA-binding protein 4 isoform 1 [Ovis aries]
Length = 361
Score = 38.5 bits (88), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 11/21 (52%), Positives = 17/21 (80%)
Query: 9 TGCFKCGRPGHWSRDCPSSSS 29
+GC++CG+ GHWS++CP S
Sbjct: 160 SGCYRCGKEGHWSKECPVDRS 180
>gi|405961574|gb|EKC27358.1| hypothetical protein CGI_10003587 [Crassostrea gigas]
Length = 328
Score = 38.5 bits (88), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 6/42 (14%)
Query: 8 PTGCFKCGRPGHWSRDCPS------SSSSAPSNSNFPSNNTA 43
P C+ CG PGH+S DCP+ S+S +N + PSNN
Sbjct: 195 PGSCYTCGEPGHYSPDCPTKENNRGSTSQQSTNYSRPSNNNC 236
>gi|357115606|ref|XP_003559579.1| PREDICTED: glycine-rich RNA-binding protein 2-like [Brachypodium
distachyon]
Length = 160
Score = 38.5 bits (88), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
Query: 11 CFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASGG 46
CF CGRPGHW+ DCP + + F S+ T GG
Sbjct: 111 CFACGRPGHWAPDCPDAGR---CSGRFSSDFTVRGG 143
>gi|108862431|gb|ABA97308.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 407
Score = 38.5 bits (88), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 22/36 (61%)
Query: 11 CFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASGG 46
CF+C GH SR+CP+ A +N+ SN++ S G
Sbjct: 207 CFRCDEWGHISRECPTLKGKAKANTVTSSNDSDSDG 242
>gi|393218783|gb|EJD04271.1| RNA-binding domain-containing protein [Fomitiporia mediterranea
MF3/22]
Length = 465
Score = 38.5 bits (88), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 18/25 (72%)
Query: 8 PTGCFKCGRPGHWSRDCPSSSSSAP 32
P CFKCG GHW+R+CP+ S+ P
Sbjct: 159 PGACFKCGMTGHWARECPNHSAHGP 183
>gi|90265093|emb|CAH67706.1| H0512B01.1 [Oryza sativa Indica Group]
Length = 1454
Score = 38.5 bits (88), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 9/65 (13%)
Query: 6 AAPTGCFKCGRPGHWSRDCPS----SSSSAPSNSNFPS-----NNTASGGGGGGSGVGDG 56
+ P CF CG PGH++ CP ++ P+NSN P+ N+ A+ V G
Sbjct: 315 SKPVICFNCGDPGHYADKCPKPRRVKNAPVPNNSNVPAPKARVNHVAAAEAQNAPDVVLG 374
Query: 57 GVSVS 61
V+
Sbjct: 375 TFPVN 379
>gi|92081528|dbj|BAE93311.1| zinc finger protein [Ciona intestinalis]
Length = 556
Score = 38.5 bits (88), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 17/25 (68%)
Query: 6 AAPTGCFKCGRPGHWSRDCPSSSSS 30
A GCFKCG GH SR+CP ++ S
Sbjct: 20 ARSKGCFKCGEEGHMSRECPQNTGS 44
>gi|47209606|emb|CAF93001.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1197
Score = 38.5 bits (88), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 12/17 (70%), Positives = 15/17 (88%)
Query: 9 TGCFKCGRPGHWSRDCP 25
TGC+ CG+ GHWS+DCP
Sbjct: 979 TGCYVCGKHGHWSKDCP 995
>gi|358385175|gb|EHK22772.1| hypothetical protein TRIVIDRAFT_16715, partial [Trichoderma virens
Gv29-8]
Length = 307
Score = 38.5 bits (88), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 39/86 (45%), Gaps = 4/86 (4%)
Query: 63 SAIGVKEKPKKLPRSRP---KLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEVSDLGHLI 119
S +G++E+ R R KL + LL G+ LR K +G+GHE SD L+
Sbjct: 48 SGLGIEEEVSVQKRVRVPNVKLDEERLLGPAGIP-KLRKRAAGLKLKGKGHEFSDASRLL 106
Query: 120 GLYSEWHSHLLPYYSFDHFVSKVEQV 145
Y W L P F ++ VE+
Sbjct: 107 SFYQLWLDDLFPKARFLDALAMVEKA 132
>gi|225463887|ref|XP_002264022.1| PREDICTED: uncharacterized protein LOC100256416 isoform 1 [Vitis
vinifera]
gi|359493015|ref|XP_003634493.1| PREDICTED: uncharacterized protein LOC100256416 isoform 2 [Vitis
vinifera]
Length = 207
Score = 38.5 bits (88), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 13/17 (76%), Positives = 17/17 (100%)
Query: 11 CFKCGRPGHWSRDCPSS 27
CFKCG+PGH++R+CPSS
Sbjct: 126 CFKCGKPGHFARECPSS 142
>gi|242093876|ref|XP_002437428.1| hypothetical protein SORBIDRAFT_10g026940 [Sorghum bicolor]
gi|241915651|gb|EER88795.1| hypothetical protein SORBIDRAFT_10g026940 [Sorghum bicolor]
Length = 559
Score = 38.1 bits (87), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 19/44 (43%), Gaps = 2/44 (4%)
Query: 6 AAPTGCFKCGRPGHWSRDCPSSSSSAPSNSNF--PSNNTASGGG 47
A GCFKCG P H +RDC N+ NT GG
Sbjct: 335 AKKDGCFKCGAPDHLARDCDQDGEQKNKGPNYVLKDENTQRGGN 378
>gi|1890638|gb|AAC57051.1| gag protein [Simian immunodeficiency virus - agm.tan-1]
Length = 523
Score = 38.1 bits (87), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 4/46 (8%)
Query: 5 KAAPTGCFKCGRPGHWSRDCPSSSSS----APSNSNFPSNNTASGG 46
+A P C KCG+PGH ++DC S ++ P+ P N GG
Sbjct: 417 RAGPNKCLKCGKPGHLAKDCRSGQANFLGRMPTWGTKPRNFLEQGG 462
>gi|22267593|gb|AAM94928.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 619
Score = 38.1 bits (87), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 21/42 (50%), Gaps = 7/42 (16%)
Query: 11 CFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASGGGGGGSG 52
CF CG+ GHW++DC P + S N GGG SG
Sbjct: 214 CFVCGKSGHWAKDC-------PERKDRKSANMIISEGGGTSG 248
>gi|449279129|gb|EMC86791.1| RNA-binding protein 4, partial [Columba livia]
Length = 250
Score = 38.1 bits (87), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 10/17 (58%), Positives = 16/17 (94%)
Query: 9 TGCFKCGRPGHWSRDCP 25
+GC++CG+ GHWS++CP
Sbjct: 160 SGCYRCGKEGHWSKECP 176
>gi|110289151|gb|ABG66100.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 172
Score = 38.1 bits (87), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Query: 11 CFKCGRPGHWSRDCPSSSS-SAPSNSNFPSNNTASGGGGGGSGVGDGG 57
CF CG+PGH +R CP AP+ S N G G GSG G G
Sbjct: 80 CFVCGQPGHLARKCPQRKGMKAPAGQTSKSANVTIGNTGDGSGYGCTG 127
>gi|339522325|gb|AEJ84327.1| RNA-binding protein 4 [Capra hircus]
Length = 362
Score = 38.1 bits (87), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 17/23 (73%)
Query: 7 APTGCFKCGRPGHWSRDCPSSSS 29
A GC++CG+ GHWS++CP S
Sbjct: 158 AQGGCYRCGKEGHWSKECPVDRS 180
>gi|311771545|ref|NP_001185774.1| RBM14-RBM4 protein isoform 1 [Homo sapiens]
gi|165928937|gb|ABY74511.1| transcriptional coactivator CoAZ [Homo sapiens]
Length = 339
Score = 38.1 bits (87), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 10/17 (58%), Positives = 16/17 (94%)
Query: 9 TGCFKCGRPGHWSRDCP 25
+GC++CG+ GHWS++CP
Sbjct: 135 SGCYRCGKEGHWSKECP 151
>gi|357445711|ref|XP_003593133.1| Glycine-rich RNA-binding protein [Medicago truncatula]
gi|355482181|gb|AES63384.1| Glycine-rich RNA-binding protein [Medicago truncatula]
Length = 491
Score = 38.1 bits (87), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 12/16 (75%), Positives = 16/16 (100%)
Query: 11 CFKCGRPGHWSRDCPS 26
CFKCG+PGH++R+CPS
Sbjct: 344 CFKCGKPGHFARECPS 359
>gi|226528928|ref|NP_001149053.1| glycine-rich RNA-binding protein 7 [Zea mays]
gi|195624344|gb|ACG34002.1| glycine-rich RNA-binding protein 7 [Zea mays]
Length = 271
Score = 38.1 bits (87), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 20/37 (54%)
Query: 11 CFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASGGG 47
CFKCG GHW+R CP S S + P++ G G
Sbjct: 60 CFKCGLSGHWARQCPYSDGSGRTGRYSPASRYGGGTG 96
>gi|440640181|gb|ELR10100.1| hypothetical protein GMDG_04500 [Geomyces destructans 20631-21]
Length = 410
Score = 38.1 bits (87), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 21/33 (63%)
Query: 6 AAPTGCFKCGRPGHWSRDCPSSSSSAPSNSNFP 38
AAP CFKCG+PGH+ CP +++ + N P
Sbjct: 354 AAPGNCFKCGKPGHFQDKCPLNATVKEIDRNDP 386
>gi|403420433|emb|CCM07133.1| predicted protein [Fibroporia radiculosa]
Length = 309
Score = 38.1 bits (87), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 22/40 (55%)
Query: 11 CFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASGGGGGG 50
C+ CG+P HW + CPS + + +N T+S GG G
Sbjct: 177 CYICGKPRHWGKLCPSKKTGDSAARPAAANTTSSTGGSKG 216
>gi|113205348|gb|ABI34354.1| Retrotransposon gag protein [Solanum demissum]
Length = 4543
Score = 38.1 bits (87), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 7/59 (11%)
Query: 3 NAKAAPTGCFKCGRPGHWSRDCPSSSSS-------APSNSNFPSNNTASGGGGGGSGVG 54
+ T CF+CG+ GH+ ++CP + S A S+S P + AS G +G G
Sbjct: 290 KCRQGQTCCFRCGQEGHFMKECPKNKQSSEKLGSRAQSSSISPPDRMASRGATSSTGGG 348
Score = 38.1 bits (87), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 7/59 (11%)
Query: 3 NAKAAPTGCFKCGRPGHWSRDCPSSSSS-------APSNSNFPSNNTASGGGGGGSGVG 54
+ T CF+CG+ GH+ ++CP + S A S+S P + AS G +G G
Sbjct: 1800 KCRQGQTCCFRCGQEGHFMKECPKNKQSSEKLGSRAQSSSISPLDRMASRGATSSTGGG 1858
Score = 38.1 bits (87), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 7/59 (11%)
Query: 3 NAKAAPTGCFKCGRPGHWSRDCPSSSSS-------APSNSNFPSNNTASGGGGGGSGVG 54
+ T CF+CG+ GH+ ++CP + S A S+S P + AS G +G G
Sbjct: 3310 KCRQGQTCCFRCGQEGHFMKECPKNKQSSEKLGSRAQSSSISPLDRMASRGATSSTGGG 3368
>gi|291231291|ref|XP_002735598.1| PREDICTED: RNA binding motif protein 4B-like isoform 1
[Saccoglossus kowalevskii]
Length = 238
Score = 38.1 bits (87), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 13/14 (92%), Positives = 13/14 (92%)
Query: 11 CFKCGRPGHWSRDC 24
CFKCGR GHWSRDC
Sbjct: 93 CFKCGRQGHWSRDC 106
>gi|113205316|gb|ABI34339.1| Polyprotein, 3'-partial, putative [Solanum demissum]
Length = 1475
Score = 38.1 bits (87), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 12/19 (63%), Positives = 15/19 (78%)
Query: 10 GCFKCGRPGHWSRDCPSSS 28
GC++CG GHW+RDCP S
Sbjct: 396 GCYECGEMGHWARDCPQHS 414
>gi|410906769|ref|XP_003966864.1| PREDICTED: RNA-binding protein 4.1-like [Takifugu rubripes]
Length = 379
Score = 38.1 bits (87), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 13/22 (59%), Positives = 17/22 (77%)
Query: 9 TGCFKCGRPGHWSRDCPSSSSS 30
TGC+ CG+ GHWS+DCP +S
Sbjct: 160 TGCYVCGKHGHWSKDCPVGRNS 181
>gi|165928940|gb|ABY74512.1| transcriptional coactivator CoAZ [Mus musculus]
Length = 336
Score = 38.1 bits (87), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 10/17 (58%), Positives = 16/17 (94%)
Query: 9 TGCFKCGRPGHWSRDCP 25
+GC++CG+ GHWS++CP
Sbjct: 135 SGCYRCGKEGHWSKECP 151
>gi|297847776|ref|XP_002891769.1| hypothetical protein ARALYDRAFT_474506 [Arabidopsis lyrata subsp.
lyrata]
gi|297337611|gb|EFH68028.1| hypothetical protein ARALYDRAFT_474506 [Arabidopsis lyrata subsp.
lyrata]
Length = 508
Score = 38.1 bits (87), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Query: 2 ENAKAAPTGCFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASGGGGGGSGVGDGGVSV- 60
++ K GCFKCG H ++DC + PS N GGG G V +G V
Sbjct: 333 DSQKGKGNGCFKCGSTDHIAKDCVGGNQ--PSKFIVKDQNRQHGGGEGYDMVFEGDVPEI 390
Query: 61 -SKSAIGVKEKPKKLPRSRP 79
+ +E+ +K+ R P
Sbjct: 391 PKREHSHERERSEKIQRRSP 410
>gi|357112598|ref|XP_003558095.1| PREDICTED: uncharacterized protein LOC100838417 [Brachypodium
distachyon]
Length = 366
Score = 38.1 bits (87), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 14/21 (66%), Positives = 17/21 (80%)
Query: 11 CFKCGRPGHWSRDCPSSSSSA 31
CFKCG GHWSRDCP+++ A
Sbjct: 325 CFKCGMAGHWSRDCPAANCGA 345
>gi|38346259|emb|CAE02081.2| OSJNBa0074B10.9 [Oryza sativa Japonica Group]
Length = 1659
Score = 38.1 bits (87), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 4/38 (10%)
Query: 6 AAPTGCFKCGRPGHWSRDCPS----SSSSAPSNSNFPS 39
+ P CF CG PGH++ CP ++ P+NSN P+
Sbjct: 509 SKPVICFNCGDPGHYADKCPKPRRVKNAPTPNNSNVPA 546
>gi|449527292|ref|XP_004170646.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like,
partial [Cucumis sativus]
Length = 425
Score = 38.1 bits (87), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 5/39 (12%)
Query: 3 NAKAAPTG-----CFKCGRPGHWSRDCPSSSSSAPSNSN 36
N + P+G CFKC + GHW+RDCP ++ P+ N
Sbjct: 381 NQASGPSGGTSGECFKCHQTGHWARDCPGLANVPPAYGN 419
>gi|312378041|gb|EFR24719.1| hypothetical protein AND_10495 [Anopheles darlingi]
Length = 311
Score = 38.1 bits (87), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 11/18 (61%), Positives = 15/18 (83%)
Query: 8 PTGCFKCGRPGHWSRDCP 25
P C++CGR GHWS++CP
Sbjct: 203 PEQCYRCGRAGHWSKECP 220
>gi|412986814|emb|CCO15240.1| predicted protein [Bathycoccus prasinos]
Length = 773
Score = 38.1 bits (87), Expect = 3.5, Method: Composition-based stats.
Identities = 11/24 (45%), Positives = 16/24 (66%)
Query: 7 APTGCFKCGRPGHWSRDCPSSSSS 30
A C+KCG PGHW+ CP+ ++
Sbjct: 663 ASGNCYKCGEPGHWASKCPNQQTT 686
>gi|215254416|gb|ACJ64200.1| vasa [Halocynthia roretzi]
Length = 691
Score = 38.1 bits (87), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 14/22 (63%), Positives = 17/22 (77%)
Query: 10 GCFKCGRPGHWSRDCPSSSSSA 31
GCFKCG+ GH +R+CPS SS
Sbjct: 149 GCFKCGQDGHMARECPSGESSG 170
>gi|116311006|emb|CAH67940.1| H0211F06-OSIGBa0153M17.12 [Oryza sativa Indica Group]
Length = 1390
Score = 38.1 bits (87), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 4/38 (10%)
Query: 6 AAPTGCFKCGRPGHWSRDCPS----SSSSAPSNSNFPS 39
+ P CF CG PGH++ CP ++ AP+NSN P+
Sbjct: 542 SKPGVCFNCGDPGHYADKCPKPRRVKNAPAPNNSNAPA 579
>gi|405954050|gb|EKC21588.1| hypothetical protein CGI_10003680 [Crassostrea gigas]
Length = 241
Score = 37.7 bits (86), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 6/42 (14%)
Query: 8 PTGCFKCGRPGHWSRDCPSS------SSSAPSNSNFPSNNTA 43
P C+ CG PGH+S DCP+ +S +N + PSNN
Sbjct: 97 PGSCYTCGEPGHYSPDCPTKENNRGLTSQQSTNYSRPSNNNC 138
>gi|190688744|gb|ACE86407.1| putative replication protein [Sorghum bicolor]
Length = 213
Score = 37.7 bits (86), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 11/15 (73%), Positives = 13/15 (86%)
Query: 10 GCFKCGRPGHWSRDC 24
CFKC +PGHWS+DC
Sbjct: 197 ACFKCNQPGHWSKDC 211
>gi|432117939|gb|ELK37940.1| E3 ubiquitin-protein ligase RBBP6 [Myotis davidii]
Length = 198
Score = 37.7 bits (86), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 11/21 (52%), Positives = 18/21 (85%)
Query: 11 CFKCGRPGHWSRDCPSSSSSA 31
CF+CGRPGH+ ++CP++ +A
Sbjct: 161 CFRCGRPGHYIKNCPTNGMNA 181
>gi|291231293|ref|XP_002735599.1| PREDICTED: RNA binding motif protein 4B-like isoform 2
[Saccoglossus kowalevskii]
Length = 237
Score = 37.7 bits (86), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 13/14 (92%), Positives = 13/14 (92%)
Query: 11 CFKCGRPGHWSRDC 24
CFKCGR GHWSRDC
Sbjct: 93 CFKCGRQGHWSRDC 106
>gi|77556955|gb|ABA99751.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1805
Score = 37.7 bits (86), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Query: 11 CFKCGRPGHWSRDCPSSSS-SAPSNSNFPSNNTASGGGGGGSGVGD 55
CF C + GH +R CP AP+ S N G G GSG G+
Sbjct: 727 CFVCSQVGHLARKCPQRKGMKAPAGQTSKSANVTIGNTGDGSGYGN 772
>gi|327554931|gb|AEB00819.1| vasa-like protein [Marsupenaeus japonicus]
Length = 698
Score = 37.7 bits (86), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 14/21 (66%), Positives = 16/21 (76%)
Query: 11 CFKCGRPGHWSRDCPSSSSSA 31
CFKCG GH +RDCPS+S S
Sbjct: 87 CFKCGEEGHMARDCPSASESG 107
Score = 37.4 bits (85), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 14/17 (82%), Positives = 14/17 (82%)
Query: 10 GCFKCGRPGHWSRDCPS 26
GCFKCG GH SRDCPS
Sbjct: 161 GCFKCGEEGHISRDCPS 177
>gi|55733934|gb|AAV59441.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1225
Score = 37.7 bits (86), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Query: 11 CFKCGRPGHWSRDCPSSSS-SAPSNSNFPSNNTASGGGGGGSG 52
CF CG+ GH +R CP AP+ S N G G GSG
Sbjct: 242 CFVCGQVGHLARKCPQRKGMKAPAGQTSKSANVTIGNTGDGSG 284
>gi|77549436|gb|ABA92233.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1483
Score = 37.7 bits (86), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 4/38 (10%)
Query: 6 AAPTGCFKCGRPGHWSRDCPS----SSSSAPSNSNFPS 39
+ P CF CG PGH++ CP ++ AP+NSN P+
Sbjct: 317 SKPGVCFNCGDPGHYADKCPKPRRVKNAPAPNNSNAPA 354
>gi|296088109|emb|CBI35498.3| unnamed protein product [Vitis vinifera]
Length = 153
Score = 37.7 bits (86), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 13/20 (65%), Positives = 18/20 (90%)
Query: 11 CFKCGRPGHWSRDCPSSSSS 30
CFKCG+PGH++R+CPSS +
Sbjct: 126 CFKCGKPGHFARECPSSEGA 145
>gi|147794075|emb|CAN71161.1| hypothetical protein VITISV_009113 [Vitis vinifera]
Length = 1141
Score = 37.7 bits (86), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 42/93 (45%), Gaps = 12/93 (12%)
Query: 11 CFKCGRPGHWSRDCPS-------SSSSAPSNSNFPSNN-----TASGGGGGGSGVGDGGV 58
C+ CG+ GH+ R C S S++ + N+ + + A G G+GD +
Sbjct: 208 CWNCGKTGHFKRQCKSPKKKNEDDSANGVTEENYVAGDFGKVYLADGSALDVVGLGDVRI 267
Query: 59 SVSKSAIGVKEKPKKLPRSRPKLTPDLLLSDDG 91
S+ ++ + EK + +P R L L D+G
Sbjct: 268 SLPNWSVWLLEKVQHIPDLRRNLISVGQLDDEG 300
>gi|77555314|gb|ABA98110.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1226
Score = 37.7 bits (86), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 4/38 (10%)
Query: 6 AAPTGCFKCGRPGHWSRDCPS----SSSSAPSNSNFPS 39
+ P CF CG PGH++ CP ++ AP+NSN P+
Sbjct: 313 SKPGVCFNCGDPGHYADKCPKPRRVKNAPAPNNSNAPA 350
>gi|62733257|gb|AAX95374.1| Integrase core domain, putative [Oryza sativa Japonica Group]
gi|108864298|gb|ABA92908.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1393
Score = 37.7 bits (86), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Query: 11 CFKCGRPGHWSRDCPSSSS-SAPSNSNFPSNNTASGGGGGGSGVGD 55
CF CG+ GH +R CP AP+ S N G GSG G+
Sbjct: 242 CFVCGQLGHLARKCPQRKGMKAPTGQTSKSANVTISNTGDGSGYGN 287
>gi|348544591|ref|XP_003459764.1| PREDICTED: RNA-binding protein 4.1-like [Oreochromis niloticus]
Length = 419
Score = 37.7 bits (86), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 10/17 (58%), Positives = 16/17 (94%)
Query: 9 TGCFKCGRPGHWSRDCP 25
+GC++CG+ GHWS++CP
Sbjct: 158 SGCYRCGQEGHWSKECP 174
>gi|449550622|gb|EMD41586.1| hypothetical protein CERSUDRAFT_61576 [Ceriporiopsis subvermispora
B]
Length = 508
Score = 37.7 bits (86), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 19/23 (82%)
Query: 8 PTGCFKCGRPGHWSRDCPSSSSS 30
P CFKCG+ GHW+R+CP+ +++
Sbjct: 170 PGACFKCGQMGHWARECPNHTTN 192
>gi|108862766|gb|ABA98797.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1243
Score = 37.7 bits (86), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Query: 11 CFKCGRPGHWSRDCP-SSSSSAPSNSNFPSNNTASGGGGGGSG 52
CF CG+ GH +R CP AP+ S N G G GSG
Sbjct: 242 CFVCGQVGHLARKCPHRKGMKAPAGQTSKSANVTIGNTGDGSG 284
>gi|29243008|emb|CAD70670.1| Gag protein [Simian immunodeficiency virus - mon]
Length = 192
Score = 37.7 bits (86), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 19/26 (73%)
Query: 9 TGCFKCGRPGHWSRDCPSSSSSAPSN 34
TGCF+CG+ GH S++CP+ + P N
Sbjct: 89 TGCFRCGKEGHXSKNCPNGGQNQPRN 114
>gi|426198327|gb|EKV48253.1| hypothetical protein AGABI2DRAFT_191883 [Agaricus bisporus var.
bisporus H97]
Length = 426
Score = 37.7 bits (86), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 12/21 (57%), Positives = 18/21 (85%)
Query: 8 PTGCFKCGRPGHWSRDCPSSS 28
P CF+CG+ GHW+R+CPS++
Sbjct: 154 PGACFRCGQMGHWARECPSNN 174
>gi|55168106|gb|AAV43974.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1568
Score = 37.7 bits (86), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 9/65 (13%)
Query: 6 AAPTGCFKCGRPGHWSRDCPS----SSSSAPSNSNFPS-----NNTASGGGGGGSGVGDG 56
+ P CF CG PGH++ CP ++ P+NSN P+ N+ A+ V G
Sbjct: 476 SKPGVCFNCGDPGHYADKCPKPRRVKNAPTPNNSNVPAPKARVNHVAAAEAQNAPDVVLG 535
Query: 57 GVSVS 61
V+
Sbjct: 536 TFPVN 540
>gi|54287529|gb|AAV31273.1| putative polyprotein [Oryza sativa Japonica Group]
gi|54287633|gb|AAV31377.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1196
Score = 37.7 bits (86), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 4/38 (10%)
Query: 6 AAPTGCFKCGRPGHWSRDCPS----SSSSAPSNSNFPS 39
+ P CF CG PGH++ CP ++ AP+NSN P+
Sbjct: 264 SKPGVCFNCGDPGHYADKCPKPRRVKNAPAPNNSNAPA 301
>gi|62734000|gb|AAX96109.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
sativa Japonica Group]
Length = 1350
Score = 37.7 bits (86), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Query: 11 CFKCGRPGHWSRDCPSSSS-SAPSNSNFPSNNTASGGGGGGSGVGD 55
CF CG+ GH +R CP AP+ S N G GSG G+
Sbjct: 242 CFVCGQLGHLARKCPQRKGMKAPTGQTSKSANVTISNTGDGSGYGN 287
>gi|388511641|gb|AFK43882.1| unknown [Lotus japonicus]
Length = 211
Score = 37.7 bits (86), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 21/36 (58%)
Query: 11 CFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASGG 46
CFKCG+PGH++R+CPS + ++ GG
Sbjct: 128 CFKCGKPGHFARECPSEGERGGGRYGGRESRSSGGG 163
>gi|255559150|ref|XP_002520597.1| hypothetical protein RCOM_0673560 [Ricinus communis]
gi|223540257|gb|EEF41830.1| hypothetical protein RCOM_0673560 [Ricinus communis]
Length = 311
Score = 37.7 bits (86), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 18/27 (66%)
Query: 3 NAKAAPTGCFKCGRPGHWSRDCPSSSS 29
N+ + CFKCG GHW+ DCPS SS
Sbjct: 233 NSVRTASSCFKCGNEGHWAEDCPSHSS 259
>gi|74096143|ref|NP_001027593.1| DEAD-Box Protein [Ciona intestinalis]
gi|4126716|dbj|BAA36711.1| DEAD-Box Protein [Ciona intestinalis]
Length = 659
Score = 37.7 bits (86), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 19/30 (63%)
Query: 6 AAPTGCFKCGRPGHWSRDCPSSSSSAPSNS 35
A GCFKCG GH SR+CP ++ S +S
Sbjct: 48 ARSKGCFKCGEEGHMSRECPQNTGSGFGDS 77
Score = 37.7 bits (86), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 19/30 (63%)
Query: 6 AAPTGCFKCGRPGHWSRDCPSSSSSAPSNS 35
A GCFKCG GH SR+CP ++ S +S
Sbjct: 81 ARSKGCFKCGEEGHMSRECPQNTGSGFGDS 110
Score = 37.4 bits (85), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 14/26 (53%), Positives = 17/26 (65%)
Query: 6 AAPTGCFKCGRPGHWSRDCPSSSSSA 31
A GCFKCG GH SR+CP ++ S
Sbjct: 114 ARSKGCFKCGEEGHMSRECPQNTGSG 139
>gi|108862657|gb|ABA98136.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1249
Score = 37.7 bits (86), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Query: 11 CFKCGRPGHWSRDCPSSSS-SAPSNSNFPSNNTASGGGGGGSGVGD 55
CF CG+ GH +R CP AP+ S G G GSG G+
Sbjct: 242 CFVCGQVGHLARKCPQRKGMKAPAGQTSKSAKVTIGNTGDGSGYGN 287
>gi|449546712|gb|EMD37681.1| hypothetical protein CERSUDRAFT_50044 [Ceriporiopsis subvermispora
B]
Length = 1000
Score = 37.7 bits (86), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 13/20 (65%), Positives = 15/20 (75%)
Query: 7 APTGCFKCGRPGHWSRDCPS 26
A T CFKCG+ GHWS CP+
Sbjct: 936 ASTACFKCGQEGHWSNACPN 955
>gi|392578148|gb|EIW71276.1| hypothetical protein TREMEDRAFT_73248 [Tremella mesenterica DSM
1558]
Length = 1002
Score = 37.7 bits (86), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 5/48 (10%)
Query: 11 CFKCGRPGHWSRDCPSSSSSAPSNSNFP---SNNTASGGGGGGSGVGD 55
CFKCG+ GHW+ CP+ S ++FP A GG G S G+
Sbjct: 928 CFKCGQSGHWASACPNEEGG--SITSFPPKRQKTAARGGSGTKSSAGE 973
>gi|351723119|ref|NP_001235732.1| uncharacterized protein LOC100526902 [Glycine max]
gi|255631115|gb|ACU15923.1| unknown [Glycine max]
Length = 176
Score = 37.7 bits (86), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 13/19 (68%), Positives = 17/19 (89%)
Query: 11 CFKCGRPGHWSRDCPSSSS 29
CFKCG+PGH++R+CPS S
Sbjct: 121 CFKCGKPGHFARECPSEGS 139
>gi|388492070|gb|AFK34101.1| unknown [Lotus japonicus]
Length = 211
Score = 37.7 bits (86), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 21/36 (58%)
Query: 11 CFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASGG 46
CFKCG+PGH++R+CPS + ++ GG
Sbjct: 128 CFKCGKPGHFARECPSEGERGGGRYGGRESRSSGGG 163
>gi|443894350|dbj|GAC71698.1| DNA topoisomerase III alpha [Pseudozyma antarctica T-34]
Length = 1780
Score = 37.7 bits (86), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 11/18 (61%), Positives = 15/18 (83%)
Query: 10 GCFKCGRPGHWSRDCPSS 27
GCF+CG+ GHWS +CP +
Sbjct: 1763 GCFRCGKKGHWSSECPGT 1780
>gi|215788934|gb|ACJ69403.1| Vasa [Botryllus schlosseri]
Length = 547
Score = 37.7 bits (86), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 13/19 (68%), Positives = 15/19 (78%)
Query: 8 PTGCFKCGRPGHWSRDCPS 26
P GCFKCG GH SR+CP+
Sbjct: 18 PKGCFKCGEEGHMSRECPN 36
>gi|12324027|gb|AAG51976.1|AC024260_14 hypothetical protein; 15173-12677 [Arabidopsis thaliana]
Length = 509
Score = 37.7 bits (86), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 34/79 (43%), Gaps = 4/79 (5%)
Query: 2 ENAKAAPTGCFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASGGGGGGSGVGDGGV-SV 60
++ K GCFKCG H ++DC S S N GGG G V +G V
Sbjct: 336 DSQKGKGNGCFKCGSTDHIAKDCVGGPS---SKFIVKDQNRQHGGGEGYEMVFEGDVHET 392
Query: 61 SKSAIGVKEKPKKLPRSRP 79
K +E+ +K+ R P
Sbjct: 393 PKHNSHERERSEKIQRRSP 411
>gi|409079907|gb|EKM80268.1| hypothetical protein AGABI1DRAFT_113469 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 423
Score = 37.7 bits (86), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 12/21 (57%), Positives = 18/21 (85%)
Query: 8 PTGCFKCGRPGHWSRDCPSSS 28
P CF+CG+ GHW+R+CPS++
Sbjct: 151 PGACFRCGQMGHWARECPSNN 171
>gi|224059014|ref|XP_002299678.1| predicted protein [Populus trichocarpa]
gi|222846936|gb|EEE84483.1| predicted protein [Populus trichocarpa]
Length = 147
Score = 37.7 bits (86), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 12/19 (63%), Positives = 17/19 (89%)
Query: 11 CFKCGRPGHWSRDCPSSSS 29
CFKCG+PGH++R+CPS +
Sbjct: 128 CFKCGKPGHFARECPSEGA 146
>gi|170046272|ref|XP_001850696.1| RNA binding motif protein 4,lark [Culex quinquefasciatus]
gi|167869088|gb|EDS32471.1| RNA binding motif protein 4,lark [Culex quinquefasciatus]
Length = 332
Score = 37.7 bits (86), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 11/18 (61%), Positives = 15/18 (83%)
Query: 8 PTGCFKCGRPGHWSRDCP 25
P C++CGR GHWS++CP
Sbjct: 167 PEQCYRCGRSGHWSKECP 184
>gi|302791061|ref|XP_002977297.1| hypothetical protein SELMODRAFT_107195 [Selaginella moellendorffii]
gi|300154667|gb|EFJ21301.1| hypothetical protein SELMODRAFT_107195 [Selaginella moellendorffii]
Length = 180
Score = 37.7 bits (86), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 13/19 (68%), Positives = 14/19 (73%)
Query: 7 APTGCFKCGRPGHWSRDCP 25
A CFKCG GHW+RDCP
Sbjct: 120 ASGNCFKCGNKGHWARDCP 138
>gi|427788709|gb|JAA59806.1| Putative protein self-association [Rhipicephalus pulchellus]
Length = 856
Score = 37.4 bits (85), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 14/19 (73%), Positives = 16/19 (84%)
Query: 11 CFKCGRPGHWSRDCPSSSS 29
CFKCG GH SRDCP++SS
Sbjct: 264 CFKCGEEGHMSRDCPTASS 282
>gi|77555759|gb|ABA98555.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1361
Score = 37.4 bits (85), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 11 CFKCGRPGHWSRDCPSSSS-SAPSNSNFPSNNTASGGGGGGSGVGD 55
CF CG+ GH +R CP AP+ S + G G GSG G+
Sbjct: 327 CFVCGQVGHLARKCPQRKGMKAPAGQTSKSADVTIGNIGDGSGYGN 372
>gi|77550940|gb|ABA93737.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1579
Score = 37.4 bits (85), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Query: 11 CFKCGRPGHWSRDCPSSSS-SAPSNSNFPSNNTASGGGGGGSGVGD 55
CF CG+ H +R CP AP+ S N G G GSG G+
Sbjct: 542 CFVCGQVRHLARKCPQRKGMKAPAGQTSKSANVTIGNTGDGSGYGN 587
>gi|332031363|gb|EGI70876.1| RNA-binding protein lark [Acromyrmex echinatior]
Length = 355
Score = 37.4 bits (85), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 17/29 (58%)
Query: 8 PTGCFKCGRPGHWSRDCPSSSSSAPSNSN 36
P C++CGR GHWS++CP + N
Sbjct: 170 PEQCYRCGRGGHWSKECPKGGMGGGPDRN 198
>gi|357621997|gb|EHJ73625.1| RNA-binding protein lark [Danaus plexippus]
Length = 341
Score = 37.4 bits (85), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 11/20 (55%), Positives = 16/20 (80%)
Query: 8 PTGCFKCGRPGHWSRDCPSS 27
P C++CGR GHWS++CP +
Sbjct: 167 PEQCYRCGRGGHWSKECPKA 186
>gi|255565552|ref|XP_002523766.1| dc50, putative [Ricinus communis]
gi|223536978|gb|EEF38615.1| dc50, putative [Ricinus communis]
Length = 210
Score = 37.4 bits (85), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 12/21 (57%), Positives = 17/21 (80%)
Query: 11 CFKCGRPGHWSRDCPSSSSSA 31
CFKCG+PGH++R+CPS +
Sbjct: 123 CFKCGKPGHFARECPSEGAKG 143
>gi|389623751|ref|XP_003709529.1| hypothetical protein MGG_16177 [Magnaporthe oryzae 70-15]
gi|351649058|gb|EHA56917.1| hypothetical protein MGG_16177 [Magnaporthe oryzae 70-15]
Length = 471
Score = 37.4 bits (85), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 12/22 (54%), Positives = 17/22 (77%)
Query: 11 CFKCGRPGHWSRDCPSSSSSAP 32
CFKC +PGH +R+CP + +S P
Sbjct: 252 CFKCNKPGHIARNCPEAHNSTP 273
>gi|332377011|gb|AEE63645.1| unknown [Dendroctonus ponderosae]
Length = 356
Score = 37.4 bits (85), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 11/18 (61%), Positives = 15/18 (83%)
Query: 8 PTGCFKCGRPGHWSRDCP 25
P C++CGR GHWS++CP
Sbjct: 170 PEQCYRCGRGGHWSKECP 187
>gi|351706306|gb|EHB09225.1| RNA-binding protein 4B [Heterocephalus glaber]
Length = 333
Score = 37.4 bits (85), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 10/17 (58%), Positives = 15/17 (88%)
Query: 9 TGCFKCGRPGHWSRDCP 25
+GC++CG+ GHWS +CP
Sbjct: 160 SGCYRCGKEGHWSEECP 176
>gi|297853464|ref|XP_002894613.1| zinc knuckle (CCHC-type) family protein [Arabidopsis lyrata
subsp. lyrata]
gi|297340455|gb|EFH70872.1| zinc knuckle (CCHC-type) family protein [Arabidopsis lyrata
subsp. lyrata]
Length = 352
Score = 37.4 bits (85), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 10/23 (43%), Positives = 18/23 (78%)
Query: 11 CFKCGRPGHWSRDCPSSSSSAPS 33
CF+C +PGHW+ +CP +++ P+
Sbjct: 6 CFRCHQPGHWANNCPLKTTTIPT 28
>gi|91179150|gb|ABE27759.1| vasa [Azumapecten farreri]
Length = 801
Score = 37.4 bits (85), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 13/22 (59%), Positives = 17/22 (77%)
Query: 10 GCFKCGRPGHWSRDCPSSSSSA 31
GCFKCG GH+SR+CP++ S
Sbjct: 278 GCFKCGEQGHFSRECPNAEKSG 299
>gi|326511146|dbj|BAJ87587.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 940
Score = 37.4 bits (85), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 14/26 (53%), Positives = 19/26 (73%)
Query: 4 AKAAPTGCFKCGRPGHWSRDCPSSSS 29
A A+ CFKC +PGH+SRDCP ++
Sbjct: 858 ANASSGLCFKCNQPGHFSRDCPGQAA 883
>gi|190688746|gb|ACE86409.1| replication protein A1-like protein [Sorghum bicolor]
Length = 993
Score = 37.4 bits (85), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 11/15 (73%), Positives = 13/15 (86%)
Query: 10 GCFKCGRPGHWSRDC 24
CFKC +PGHWS+DC
Sbjct: 977 ACFKCNQPGHWSKDC 991
>gi|47209605|emb|CAF93000.1| unnamed protein product [Tetraodon nigroviridis]
Length = 391
Score = 37.4 bits (85), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 10/17 (58%), Positives = 16/17 (94%)
Query: 9 TGCFKCGRPGHWSRDCP 25
+GC++CG+ GHWS++CP
Sbjct: 158 SGCYRCGQEGHWSKECP 174
>gi|32488154|emb|CAE02906.1| OSJNBb0045P24.14 [Oryza sativa Japonica Group]
Length = 1195
Score = 37.4 bits (85), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 4/38 (10%)
Query: 6 AAPTGCFKCGRPGHWSRDCPS----SSSSAPSNSNFPS 39
+ P CF CG PGH++ CP + AP+NSN P+
Sbjct: 317 SKPGVCFNCGDPGHYADKCPKPRRVKNVPAPNNSNAPA 354
>gi|345493962|ref|XP_003427189.1| PREDICTED: RNA-binding protein lark-like [Nasonia vitripennis]
Length = 382
Score = 37.4 bits (85), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 11/18 (61%), Positives = 15/18 (83%)
Query: 8 PTGCFKCGRPGHWSRDCP 25
P C++CGR GHWS++CP
Sbjct: 121 PEQCYRCGRGGHWSKECP 138
>gi|255076569|ref|XP_002501959.1| predicted protein [Micromonas sp. RCC299]
gi|226517223|gb|ACO63217.1| predicted protein [Micromonas sp. RCC299]
Length = 867
Score = 37.4 bits (85), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 11/16 (68%), Positives = 14/16 (87%)
Query: 11 CFKCGRPGHWSRDCPS 26
CF CG+ GHW+RDCP+
Sbjct: 777 CFTCGQTGHWTRDCPN 792
>gi|194387704|dbj|BAG61265.1| unnamed protein product [Homo sapiens]
Length = 200
Score = 37.4 bits (85), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 6/80 (7%)
Query: 118 LIGLYSEWHSHLLPYYSFDHFVSKVEQVAASRRVKMCIRDLRDRVANGGDPTKLHEAAVE 177
LI W L P F+ F+ +VE + + + V+ C++ +R D LHE V
Sbjct: 2 LIRHMEHWAHRLFPKLQFEDFIDRVEYLGSKKEVQTCLKRIR------LDLPILHEDFVS 55
Query: 178 HDGPVDEQAPAEAMSSERQP 197
++ V E + S+E P
Sbjct: 56 NNDEVAENNEHDVTSTELDP 75
>gi|47223220|emb|CAG11355.1| unnamed protein product [Tetraodon nigroviridis]
Length = 167
Score = 37.4 bits (85), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 13/18 (72%), Positives = 16/18 (88%)
Query: 11 CFKCGRPGHWSRDCPSSS 28
CF CGRPGHW ++CP+SS
Sbjct: 9 CFGCGRPGHWVKNCPTSS 26
>gi|336374485|gb|EGO02822.1| hypothetical protein SERLA73DRAFT_70307 [Serpula lacrymans var.
lacrymans S7.3]
Length = 520
Score = 37.4 bits (85), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 12/19 (63%), Positives = 16/19 (84%)
Query: 8 PTGCFKCGRPGHWSRDCPS 26
P CFKCG+ GHW+R+CP+
Sbjct: 224 PGACFKCGQTGHWARECPN 242
>gi|22711558|gb|AAM01161.2|AC113336_13 Putative retroelement [Oryza sativa Japonica Group]
gi|78707943|gb|ABB46918.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1661
Score = 37.4 bits (85), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 9/65 (13%)
Query: 6 AAPTGCFKCGRPGHWSRDCPS----SSSSAPSNSNFPS-----NNTASGGGGGGSGVGDG 56
+ P CF CG PGH++ CP ++ AP+N N P+ N+ A+ V G
Sbjct: 627 SKPVICFNCGDPGHYADKCPKPRRVKNAPAPNNFNVPAPKARVNHVAAAEAQNAPDVVLG 686
Query: 57 GVSVS 61
V+
Sbjct: 687 TFPVN 691
>gi|414873229|tpg|DAA51786.1| TPA: hypothetical protein ZEAMMB73_750935 [Zea mays]
Length = 369
Score = 37.4 bits (85), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 13/17 (76%), Positives = 15/17 (88%)
Query: 11 CFKCGRPGHWSRDCPSS 27
CFKCG PGHW+R+CP S
Sbjct: 94 CFKCGDPGHWARECPQS 110
Score = 37.4 bits (85), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 13/19 (68%), Positives = 15/19 (78%)
Query: 7 APTGCFKCGRPGHWSRDCP 25
+P C+ CGR GHWSRDCP
Sbjct: 323 SPGACYNCGRSGHWSRDCP 341
>gi|389611835|dbj|BAM19479.1| RNA binding motif protein 4,lark [Papilio xuthus]
Length = 296
Score = 37.4 bits (85), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 11/20 (55%), Positives = 16/20 (80%)
Query: 8 PTGCFKCGRPGHWSRDCPSS 27
P C++CGR GHWS++CP +
Sbjct: 121 PEQCYRCGRGGHWSKECPKA 140
>gi|392571790|gb|EIW64962.1| hypothetical protein TRAVEDRAFT_55734 [Trametes versicolor
FP-101664 SS1]
Length = 490
Score = 37.4 bits (85), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 12/19 (63%), Positives = 16/19 (84%)
Query: 8 PTGCFKCGRPGHWSRDCPS 26
P CFKCG+ GHW+R+CP+
Sbjct: 178 PGACFKCGQMGHWARECPN 196
>gi|380021805|ref|XP_003694747.1| PREDICTED: RNA-binding protein lark-like [Apis florea]
Length = 351
Score = 37.4 bits (85), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 17/29 (58%)
Query: 8 PTGCFKCGRPGHWSRDCPSSSSSAPSNSN 36
P C++CGR GHWS++CP + N
Sbjct: 170 PEQCYRCGRGGHWSKECPKGGMGGGPDRN 198
>gi|443896205|dbj|GAC73549.1| predicted E3 ubiquitin ligase [Pseudozyma antarctica T-34]
Length = 633
Score = 37.4 bits (85), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 10/17 (58%), Positives = 16/17 (94%)
Query: 11 CFKCGRPGHWSRDCPSS 27
CF+CG+PGHW ++CP++
Sbjct: 228 CFRCGKPGHWIQECPTN 244
>gi|22330231|ref|NP_175776.2| cyclophilin 59 [Arabidopsis thaliana]
gi|45680880|gb|AAS75309.1| multidomain cyclophilin type peptidyl-prolyl cis-trans isomerase
[Arabidopsis thaliana]
gi|332194868|gb|AEE32989.1| cyclophilin 59 [Arabidopsis thaliana]
Length = 506
Score = 37.4 bits (85), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 34/79 (43%), Gaps = 4/79 (5%)
Query: 2 ENAKAAPTGCFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASGGGGGGSGVGDGGV-SV 60
++ K GCFKCG H ++DC S S N GGG G V +G V
Sbjct: 333 DSQKGKGNGCFKCGSTDHIAKDCVGGPS---SKFIVKDQNRQHGGGEGYEMVFEGDVHET 389
Query: 61 SKSAIGVKEKPKKLPRSRP 79
K +E+ +K+ R P
Sbjct: 390 PKHNSHERERSEKIQRRSP 408
>gi|242007024|ref|XP_002424342.1| Arginine/serine-rich-splicing factor RSP31, putative [Pediculus
humanus corporis]
gi|212507742|gb|EEB11604.1| Arginine/serine-rich-splicing factor RSP31, putative [Pediculus
humanus corporis]
Length = 326
Score = 37.4 bits (85), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 11/18 (61%), Positives = 15/18 (83%)
Query: 8 PTGCFKCGRPGHWSRDCP 25
P C++CGR GHWS++CP
Sbjct: 170 PEQCYRCGRGGHWSKECP 187
>gi|112983834|ref|NP_001037293.1| RNA-binding protein lark [Bombyx mori]
gi|57236850|gb|AAW48898.1| lark-PA [Bombyx mori]
Length = 343
Score = 37.4 bits (85), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 11/20 (55%), Positives = 16/20 (80%)
Query: 8 PTGCFKCGRPGHWSRDCPSS 27
P C++CGR GHWS++CP +
Sbjct: 167 PEQCYRCGRGGHWSKECPKA 186
>gi|156720285|dbj|BAF76795.1| vasa-related protein [Enchytraeus japonensis]
Length = 516
Score = 37.4 bits (85), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 12/20 (60%), Positives = 17/20 (85%)
Query: 10 GCFKCGRPGHWSRDCPSSSS 29
GCFKCG GH +RDCP++++
Sbjct: 2 GCFKCGEDGHVARDCPNAAN 21
>gi|395544486|ref|XP_003774141.1| PREDICTED: RNA-binding protein 4-like [Sarcophilus harrisii]
Length = 393
Score = 37.4 bits (85), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 10/17 (58%), Positives = 16/17 (94%)
Query: 9 TGCFKCGRPGHWSRDCP 25
+GC++CG+ GHWS++CP
Sbjct: 190 SGCYRCGKEGHWSKECP 206
>gi|322797564|gb|EFZ19608.1| hypothetical protein SINV_13630 [Solenopsis invicta]
Length = 324
Score = 37.4 bits (85), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 17/29 (58%)
Query: 8 PTGCFKCGRPGHWSRDCPSSSSSAPSNSN 36
P C++CGR GHWS++CP + N
Sbjct: 170 PEQCYRCGRGGHWSKECPKGGMGGGPDRN 198
>gi|242086613|ref|XP_002439139.1| hypothetical protein SORBIDRAFT_09g001250 [Sorghum bicolor]
gi|241944424|gb|EES17569.1| hypothetical protein SORBIDRAFT_09g001250 [Sorghum bicolor]
Length = 663
Score = 37.4 bits (85), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 11/15 (73%), Positives = 13/15 (86%)
Query: 10 GCFKCGRPGHWSRDC 24
CFKC +PGHWS+DC
Sbjct: 647 ACFKCNQPGHWSKDC 661
>gi|302684073|ref|XP_003031717.1| hypothetical protein SCHCODRAFT_108922 [Schizophyllum commune H4-8]
gi|300105410|gb|EFI96814.1| hypothetical protein SCHCODRAFT_108922, partial [Schizophyllum
commune H4-8]
Length = 1102
Score = 37.4 bits (85), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 12/21 (57%), Positives = 14/21 (66%)
Query: 5 KAAPTGCFKCGRPGHWSRDCP 25
K P CF CG P HW++DCP
Sbjct: 747 KPPPGPCFACGSPNHWNKDCP 767
>gi|440484258|gb|ELQ64351.1| hypothetical protein OOW_P131scaffold00632g1 [Magnaporthe oryzae
P131]
Length = 309
Score = 37.4 bits (85), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 12/22 (54%), Positives = 17/22 (77%)
Query: 11 CFKCGRPGHWSRDCPSSSSSAP 32
CFKC +PGH +R+CP + +S P
Sbjct: 252 CFKCNKPGHIARNCPEAHNSTP 273
>gi|328786023|ref|XP_623841.3| PREDICTED: RNA-binding protein lark-like isoform 1 [Apis mellifera]
Length = 356
Score = 37.4 bits (85), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 17/29 (58%)
Query: 8 PTGCFKCGRPGHWSRDCPSSSSSAPSNSN 36
P C++CGR GHWS++CP + N
Sbjct: 170 PEQCYRCGRGGHWSKECPKGGMGGGPDRN 198
>gi|157138308|ref|XP_001657237.1| RNA binding motif protein 4,lark [Aedes aegypti]
gi|108869514|gb|EAT33739.1| AAEL013982-PA [Aedes aegypti]
Length = 330
Score = 37.4 bits (85), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 11/18 (61%), Positives = 15/18 (83%)
Query: 8 PTGCFKCGRPGHWSRDCP 25
P C++CGR GHWS++CP
Sbjct: 167 PEMCYRCGRSGHWSKECP 184
>gi|403413643|emb|CCM00343.1| predicted protein [Fibroporia radiculosa]
Length = 559
Score = 37.4 bits (85), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 12/19 (63%), Positives = 16/19 (84%)
Query: 8 PTGCFKCGRPGHWSRDCPS 26
P CFKCG+ GHW+R+CP+
Sbjct: 242 PGACFKCGQVGHWARECPN 260
>gi|108710065|gb|ABF97860.1| retrotransposon protein, putative, Ty1-copia subclass, expressed
[Oryza sativa Japonica Group]
Length = 661
Score = 37.4 bits (85), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Query: 11 CFKCGRPGHWSRDCPS-SSSSAPSNSNFPSNNTASGGGGGGSG 52
CF CG+ GH +R CP AP+ S N G G GSG
Sbjct: 612 CFVCGQVGHLARKCPQRKGMKAPAGQTSKSANVTIGNTGDGSG 654
>gi|48475093|gb|AAT44162.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1302
Score = 37.4 bits (85), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Query: 11 CFKCGRPGHWSRDCPSSSS-SAPSNSNFPSNNTASGGGGGGSGVGD 55
CF CG+ GH +R C AP+ S N G G GSG G+
Sbjct: 242 CFVCGQVGHLARKCSQRKGMKAPAGQTSKSANVTIGNTGDGSGYGN 287
>gi|383848340|ref|XP_003699809.1| PREDICTED: RNA-binding protein lark-like [Megachile rotundata]
Length = 351
Score = 37.0 bits (84), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 17/29 (58%)
Query: 8 PTGCFKCGRPGHWSRDCPSSSSSAPSNSN 36
P C++CGR GHWS++CP + N
Sbjct: 170 PEQCYRCGRGGHWSKECPKGGMGGGPDRN 198
>gi|308505474|ref|XP_003114920.1| CRE-GLH-1 protein [Caenorhabditis remanei]
gi|308259102|gb|EFP03055.1| CRE-GLH-1 protein [Caenorhabditis remanei]
Length = 798
Score = 37.0 bits (84), Expect = 6.3, Method: Composition-based stats.
Identities = 12/20 (60%), Positives = 14/20 (70%)
Query: 6 AAPTGCFKCGRPGHWSRDCP 25
AP C+ C +PGH SRDCP
Sbjct: 184 GAPRNCYNCNQPGHQSRDCP 203
>gi|449438165|ref|XP_004136860.1| PREDICTED: uncharacterized protein LOC101215898 [Cucumis sativus]
gi|449478936|ref|XP_004155458.1| PREDICTED: uncharacterized protein LOC101227324 [Cucumis sativus]
Length = 211
Score = 37.0 bits (84), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 14/24 (58%), Positives = 21/24 (87%), Gaps = 1/24 (4%)
Query: 4 AKAAPTG-CFKCGRPGHWSRDCPS 26
A+ + +G CFKCG+PGH++R+CPS
Sbjct: 115 ARGSNSGDCFKCGKPGHFARECPS 138
>gi|222640791|gb|EEE68923.1| hypothetical protein OsJ_27787 [Oryza sativa Japonica Group]
Length = 349
Score = 37.0 bits (84), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 19/37 (51%)
Query: 11 CFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASGGG 47
CF CG+ GHW++DCP +N + SG G
Sbjct: 116 CFVCGKSGHWAKDCPERKDRKSANMIISEDGGTSGYG 152
>gi|46121805|ref|XP_385456.1| hypothetical protein FG05280.1 [Gibberella zeae PH-1]
Length = 674
Score = 37.0 bits (84), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 27/64 (42%), Gaps = 14/64 (21%)
Query: 11 CFKCGRPGHWSRDCPSSSSSAPS------NSNFPSNNTASGGGGGGSGVGDGGVSVSKSA 64
C+ CG GHW+ CP + P+ NSN P G GG+ GG SK
Sbjct: 16 CYNCGTAGHWAIACPEPTRETPAGLAAWRNSNTP--------GHGGNRDHHGGSKKSKGP 67
Query: 65 IGVK 68
I K
Sbjct: 68 IITK 71
>gi|2078531|gb|AAC53171.1| Mlark [Mus musculus]
Length = 367
Score = 37.0 bits (84), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 11/21 (52%), Positives = 17/21 (80%)
Query: 9 TGCFKCGRPGHWSRDCPSSSS 29
+GC++CG+ GHWS++CP S
Sbjct: 160 SGCYRCGKEGHWSKECPIDRS 180
>gi|307195687|gb|EFN77529.1| RNA-binding protein lark [Harpegnathos saltator]
Length = 325
Score = 37.0 bits (84), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 17/29 (58%)
Query: 8 PTGCFKCGRPGHWSRDCPSSSSSAPSNSN 36
P C++CGR GHWS++CP + N
Sbjct: 170 PEQCYRCGRGGHWSKECPKGGMGGGPDRN 198
>gi|302688921|ref|XP_003034140.1| hypothetical protein SCHCODRAFT_52805 [Schizophyllum commune
H4-8]
gi|300107835|gb|EFI99237.1| hypothetical protein SCHCODRAFT_52805, partial [Schizophyllum
commune H4-8]
Length = 469
Score = 37.0 bits (84), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 16/25 (64%)
Query: 1 MENAKAAPTGCFKCGRPGHWSRDCP 25
+ + K PT C CG P HW+RDCP
Sbjct: 8 IRSKKKPPTPCRPCGSPFHWNRDCP 32
>gi|299755971|ref|XP_001829009.2| hypothetical protein CC1G_01689 [Coprinopsis cinerea okayama7#130]
gi|298411464|gb|EAU92644.2| hypothetical protein CC1G_01689 [Coprinopsis cinerea okayama7#130]
Length = 439
Score = 37.0 bits (84), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 12/21 (57%), Positives = 17/21 (80%)
Query: 8 PTGCFKCGRPGHWSRDCPSSS 28
P CF+CG+ GHW+R+CP+ S
Sbjct: 166 PGACFRCGQLGHWARECPTQS 186
>gi|16648909|gb|AAL24306.1| Unknown protein [Arabidopsis thaliana]
Length = 441
Score = 37.0 bits (84), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 34/79 (43%), Gaps = 4/79 (5%)
Query: 2 ENAKAAPTGCFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASGGGGGGSGVGDGGV-SV 60
++ K GCFKCG H ++DC S S N GGG G V +G V
Sbjct: 333 DSQKGKGNGCFKCGSTDHIAKDCVGGPS---SKFIVKDQNRQHGGGEGYEMVFEGDVHET 389
Query: 61 SKSAIGVKEKPKKLPRSRP 79
K +E+ +K+ R P
Sbjct: 390 PKHNSHERERSEKIQRRSP 408
>gi|443925813|gb|ELU44576.1| RNA recognition motif domain-containing protein [Rhizoctonia solani
AG-1 IA]
Length = 449
Score = 37.0 bits (84), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 18/33 (54%)
Query: 8 PTGCFKCGRPGHWSRDCPSSSSSAPSNSNFPSN 40
P CFKCG GHW+R+CP + FP +
Sbjct: 194 PGACFKCGTHGHWARECPHNVVPGLVKERFPQD 226
>gi|45360169|gb|AAS59204.1| gag protein [Human immunodeficiency virus 1]
Length = 491
Score = 37.0 bits (84), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 5/36 (13%)
Query: 10 GCFKCGRPGHWSRDCPSSSSS-----APSNSNFPSN 40
GC+KCGR GH +DCP ++ PSN P N
Sbjct: 407 GCWKCGREGHQMKDCPERQANFLGRIWPSNKGRPGN 442
>gi|9629499|ref|NP_056907.1| gag-pro-pol polyprotein [Simian T-lymphotropic virus 2]
gi|3097273|emb|CAA74901.1| gag-pro-pol polyprotein [Simian T-lymphotropic virus 2]
Length = 1468
Score = 37.0 bits (84), Expect = 6.6, Method: Composition-based stats.
Identities = 14/21 (66%), Positives = 16/21 (76%), Gaps = 1/21 (4%)
Query: 5 KAAPTG-CFKCGRPGHWSRDC 24
K PT CF+CG+ GHWSRDC
Sbjct: 355 KPPPTQPCFRCGKTGHWSRDC 375
>gi|395334012|gb|EJF66388.1| hypothetical protein DICSQDRAFT_123087 [Dichomitus squalens
LYAD-421 SS1]
Length = 503
Score = 37.0 bits (84), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 12/19 (63%), Positives = 16/19 (84%)
Query: 8 PTGCFKCGRPGHWSRDCPS 26
P CFKCG+ GHW+R+CP+
Sbjct: 197 PGACFKCGQMGHWARECPN 215
>gi|201067640|gb|ACH92926.1| vasa protein [Parhyale hawaiensis]
Length = 707
Score = 37.0 bits (84), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 14/17 (82%), Positives = 14/17 (82%)
Query: 11 CFKCGRPGHWSRDCPSS 27
CFKCG GH SRDCPSS
Sbjct: 141 CFKCGEEGHMSRDCPSS 157
>gi|222630420|gb|EEE62552.1| hypothetical protein OsJ_17351 [Oryza sativa Japonica Group]
Length = 251
Score = 37.0 bits (84), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 11 CFKCGRPGHWSRDC-PSSSSSAPSNSNFPSNNTASGGGGGGSGVGD 55
CF CG+PGH +R C AP+ +N G G GSG G+
Sbjct: 165 CFVCGQPGHLARKCLQRMGMKAPAGQTSKFDNVTIGSTGDGSGYGN 210
>gi|91088839|ref|XP_970745.1| PREDICTED: similar to lark CG8597-PA [Tribolium castaneum]
gi|270012337|gb|EFA08785.1| hypothetical protein TcasGA2_TC006476 [Tribolium castaneum]
Length = 358
Score = 37.0 bits (84), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 11/18 (61%), Positives = 15/18 (83%)
Query: 8 PTGCFKCGRPGHWSRDCP 25
P C++CGR GHWS++CP
Sbjct: 170 PEQCYRCGRGGHWSKECP 187
>gi|78707944|gb|ABB46919.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1778
Score = 37.0 bits (84), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 9/65 (13%)
Query: 6 AAPTGCFKCGRPGHWSRDCPS----SSSSAPSNSNFPS-----NNTASGGGGGGSGVGDG 56
+ P CF CG PGH++ CP ++ AP+N N P+ N+ A+ V G
Sbjct: 612 SKPVICFNCGDPGHYADKCPKPRRVKNAPAPNNFNVPAPKARVNHVAAAEAQNAPDVVLG 671
Query: 57 GVSVS 61
V+
Sbjct: 672 TFPVN 676
>gi|302672723|ref|XP_003026049.1| hypothetical protein SCHCODRAFT_62723 [Schizophyllum commune
H4-8]
gi|300099729|gb|EFI91146.1| hypothetical protein SCHCODRAFT_62723 [Schizophyllum commune
H4-8]
Length = 485
Score = 37.0 bits (84), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 12/21 (57%), Positives = 14/21 (66%)
Query: 5 KAAPTGCFKCGRPGHWSRDCP 25
K P CF CG P HW++DCP
Sbjct: 14 KPPPGPCFACGSPNHWNKDCP 34
>gi|238014210|gb|ACR38140.1| unknown [Zea mays]
gi|414873814|tpg|DAA52371.1| TPA: glycine-rich RNA-binding protein 8 isoform 1 [Zea mays]
gi|414873815|tpg|DAA52372.1| TPA: glycine-rich RNA-binding protein 8 isoform 2 [Zea mays]
gi|414873816|tpg|DAA52373.1| TPA: glycine-rich RNA-binding protein 8 isoform 3 [Zea mays]
Length = 205
Score = 37.0 bits (84), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 12/16 (75%), Positives = 16/16 (100%)
Query: 11 CFKCGRPGHWSRDCPS 26
CFKCG+PGH++R+CPS
Sbjct: 130 CFKCGKPGHFARECPS 145
>gi|363747279|ref|XP_003643963.1| PREDICTED: RNA-binding protein 4B-like [Gallus gallus]
Length = 372
Score = 37.0 bits (84), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 10/17 (58%), Positives = 16/17 (94%)
Query: 9 TGCFKCGRPGHWSRDCP 25
+GC++CG+ GHWS++CP
Sbjct: 164 SGCYRCGKEGHWSKECP 180
>gi|356529769|ref|XP_003533460.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Glycine max]
Length = 894
Score = 37.0 bits (84), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 15/23 (65%), Positives = 18/23 (78%), Gaps = 1/23 (4%)
Query: 11 CFKCGRPGHWSRDCPSSSSSAPS 33
CFKC + GHW+RDCP S+APS
Sbjct: 850 CFKCHQTGHWARDCP-GLSAAPS 871
>gi|407739443|gb|AFU32223.1| gag protein [Human immunodeficiency virus 1]
gi|407739451|gb|AFU32230.1| gag protein [Human immunodeficiency virus 1]
gi|407739467|gb|AFU32244.1| gag protein [Human immunodeficiency virus 1]
gi|407739475|gb|AFU32251.1| gag protein [Human immunodeficiency virus 1]
gi|407739483|gb|AFU32258.1| gag protein [Human immunodeficiency virus 1]
gi|407739491|gb|AFU32265.1| gag protein [Human immunodeficiency virus 1]
Length = 495
Score = 37.0 bits (84), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 34/75 (45%), Gaps = 10/75 (13%)
Query: 10 GCFKCGRPGHWSRDCPSSSSS-----APSNS----NFPSNNTA-SGGGGGGSGVGDGGVS 59
GC+KCG+ GH +DC ++ PSN NFP N + G+G+G S
Sbjct: 407 GCWKCGKEGHQMKDCTERQANFLGKIWPSNKGRPGNFPQNRLEPTAPPAENWGMGEGMTS 466
Query: 60 VSKSAIGVKEKPKKL 74
+ K KE P L
Sbjct: 467 LPKQEQKDKEHPPPL 481
>gi|12698633|gb|AAK01618.1|AF314096_1 Gag protein [Magnaporthe grisea]
Length = 459
Score = 37.0 bits (84), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 23/43 (53%)
Query: 11 CFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASGGGGGGSGV 53
CF+C PGH SR+CP+ + P+ S N + G G+ +
Sbjct: 407 CFQCREPGHISRNCPNGDTGRPTISEDRVNQIIASYHGKGTDM 449
>gi|307187784|gb|EFN72750.1| RNA-binding protein lark [Camponotus floridanus]
Length = 331
Score = 37.0 bits (84), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 17/29 (58%)
Query: 8 PTGCFKCGRPGHWSRDCPSSSSSAPSNSN 36
P C++CGR GHWS++CP + N
Sbjct: 170 PEQCYRCGRGGHWSKECPKGGMGGGPDRN 198
>gi|407739459|gb|AFU32237.1| gag protein [Human immunodeficiency virus 1]
Length = 495
Score = 37.0 bits (84), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 34/75 (45%), Gaps = 10/75 (13%)
Query: 10 GCFKCGRPGHWSRDCPSSSSS-----APSNS----NFPSNNTA-SGGGGGGSGVGDGGVS 59
GC+KCG+ GH +DC ++ PSN NFP N + G+G+G S
Sbjct: 407 GCWKCGKEGHQMKDCTERQANFLGKIWPSNKGRPGNFPQNRLEPTAPPAENWGMGEGMTS 466
Query: 60 VSKSAIGVKEKPKKL 74
+ K KE P L
Sbjct: 467 LPKQEQKDKEHPPPL 481
>gi|440638988|gb|ELR08907.1| hypothetical protein GMDG_08668 [Geomyces destructans 20631-21]
Length = 355
Score = 37.0 bits (84), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 1 MENAKAAPTG-CFKCGRPGHWSRDCPSSSSSAPSNSNFP 38
+ A AP+G CFKCG+PGH+ CP +++ + N P
Sbjct: 293 LRTAVPAPSGNCFKCGKPGHFQDKCPLNATIKEMDRNDP 331
>gi|347839347|emb|CCD53919.1| hypothetical protein [Botryotinia fuckeliana]
Length = 867
Score = 37.0 bits (84), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Query: 6 AAPTGCFKCGRPGHWSRDCPSSSSSAPSNSNF 37
AAPT CFKC + GH++ +CP++ PS F
Sbjct: 250 AAPT-CFKCRKTGHYANNCPTNGKGKPSEWAF 280
>gi|116634841|emb|CAH67291.1| OSIGBa0103O01.9 [Oryza sativa Indica Group]
Length = 857
Score = 37.0 bits (84), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 7/42 (16%)
Query: 11 CFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASGGGGGGSG 52
CF CG+P HW+++CP S N GGG SG
Sbjct: 202 CFVCGKPRHWAKNCPDRKDKK-------SANMVISEGGGTSG 236
>gi|353238715|emb|CCA70653.1| hypothetical protein PIIN_04589 [Piriformospora indica DSM 11827]
Length = 410
Score = 37.0 bits (84), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 12/18 (66%), Positives = 14/18 (77%)
Query: 8 PTGCFKCGRPGHWSRDCP 25
P CFKCG GHW+R+CP
Sbjct: 130 PGACFKCGNHGHWARECP 147
>gi|326417042|gb|ADZ73365.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 37.0 bits (84), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 34/75 (45%), Gaps = 10/75 (13%)
Query: 10 GCFKCGRPGHWSRDCPSSSSS-----APSNS----NFPSNN-TASGGGGGGSGVGDGGVS 59
GC+KCG+ GH +DC ++ PSN NFP N + G+G+G S
Sbjct: 410 GCWKCGKEGHQMKDCTERQANFLGKLWPSNKGRPGNFPQNRPEPTAPPAENWGMGEGTTS 469
Query: 60 VSKSAIGVKEKPKKL 74
+ K KE P L
Sbjct: 470 LLKQEQKDKEHPPPL 484
>gi|253771018|gb|ACT35657.1| vasa-like protein [Haliotis asinina]
Length = 763
Score = 37.0 bits (84), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 13/21 (61%), Positives = 17/21 (80%)
Query: 11 CFKCGRPGHWSRDCPSSSSSA 31
CFKCG GH+SR+CP++ SS
Sbjct: 209 CFKCGEEGHFSRECPNADSSG 229
>gi|407739499|gb|AFU32272.1| gag protein [Human immunodeficiency virus 1]
Length = 495
Score = 37.0 bits (84), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 34/75 (45%), Gaps = 10/75 (13%)
Query: 10 GCFKCGRPGHWSRDCPSSSSS-----APSNS----NFPSNNTA-SGGGGGGSGVGDGGVS 59
GC+KCG+ GH +DC ++ PSN NFP N + G+G+G S
Sbjct: 407 GCWKCGKEGHQMKDCTERQANFLGKIWPSNKGRPGNFPQNRLEPTAPPAENWGMGEGMTS 466
Query: 60 VSKSAIGVKEKPKKL 74
+ K KE P L
Sbjct: 467 LPKQEQKDKEHPPPL 481
>gi|260790117|ref|XP_002590090.1| hypothetical protein BRAFLDRAFT_83361 [Branchiostoma floridae]
gi|229275278|gb|EEN46101.1| hypothetical protein BRAFLDRAFT_83361 [Branchiostoma floridae]
Length = 326
Score = 37.0 bits (84), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 11/16 (68%), Positives = 15/16 (93%)
Query: 11 CFKCGRPGHWSRDCPS 26
C++CG+ GHWSRDCP+
Sbjct: 105 CYRCGKMGHWSRDCPT 120
>gi|308813913|ref|XP_003084262.1| unnamed protein product [Ostreococcus tauri]
gi|116056146|emb|CAL58327.1| unnamed protein product [Ostreococcus tauri]
Length = 515
Score = 37.0 bits (84), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 17/25 (68%)
Query: 5 KAAPTGCFKCGRPGHWSRDCPSSSS 29
K+ P CFKC + GH +DCPS SS
Sbjct: 335 KSNPGDCFKCKQKGHLQKDCPSKSS 359
>gi|62734149|gb|AAX96258.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
sativa Japonica Group]
gi|77550499|gb|ABA93296.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 532
Score = 37.0 bits (84), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 5/42 (11%)
Query: 11 CFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASGGGGGGSG 52
CF G+PGHW++DCP +N + GGG G G
Sbjct: 72 CFVRGKPGHWAKDCPDRKDKKSANMVI-----SEGGGTLGYG 108
>gi|149036678|gb|EDL91296.1| cellular nucleic acid binding protein 1, isoform CRA_d [Rattus
norvegicus]
Length = 83
Score = 37.0 bits (84), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 12/16 (75%), Positives = 15/16 (93%)
Query: 11 CFKCGRPGHWSRDCPS 26
CFKCGR GHW+R+CP+
Sbjct: 6 CFKCGRSGHWARECPT 21
>gi|350854679|emb|CAZ36536.2| peptidyl-prolyl cis-trans isomerase h, ppih,putative [Schistosoma
mansoni]
Length = 1651
Score = 37.0 bits (84), Expect = 7.9, Method: Composition-based stats.
Identities = 18/35 (51%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Query: 78 RPKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEV 112
RPKL P LLS+ GL +L F + K+RG+G+EV
Sbjct: 1609 RPKLDPQRLLSNKGLPALLEDFKKV-KFRGKGYEV 1642
>gi|77553983|gb|ABA96779.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1468
Score = 37.0 bits (84), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Query: 11 CFKCGRPGHWSRDC-PSSSSSAPSNSNFPSNNTASGGGGGGSGVGD 55
CF CG+ GH +R C AP+ S N G G GSG G+
Sbjct: 329 CFVCGQVGHLARKCLQCKGMKAPAGQTSKSANVTIGNTGDGSGYGN 374
>gi|218193106|gb|EEC75533.1| hypothetical protein OsI_12151 [Oryza sativa Indica Group]
Length = 328
Score = 37.0 bits (84), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 18/37 (48%)
Query: 11 CFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASGGG 47
CF CG+ GHW++DCP +N SG G
Sbjct: 40 CFVCGKSGHWAKDCPKRKDRKSANMVISKGGETSGYG 76
>gi|91772080|ref|YP_567049.1| protease [Simian T-lymphotropic virus 2]
Length = 283
Score = 37.0 bits (84), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
Query: 1 MENAKAAPT-GCFKCGRPGHWSRDC 24
++ K PT CF+CG+ GHWSRDC
Sbjct: 24 VQPRKPPPTQPCFRCGKTGHWSRDC 48
>gi|2078529|gb|AAC51293.1| Hlark [Homo sapiens]
Length = 366
Score = 37.0 bits (84), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 10/17 (58%), Positives = 16/17 (94%)
Query: 9 TGCFKCGRPGHWSRDCP 25
+GC++CG+ GHWS++CP
Sbjct: 160 SGCYRCGKEGHWSKECP 176
>gi|226499338|ref|NP_001149519.1| glycine-rich RNA-binding protein 8 [Zea mays]
gi|195627730|gb|ACG35695.1| glycine-rich RNA-binding protein 8 [Zea mays]
Length = 198
Score = 37.0 bits (84), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 12/16 (75%), Positives = 16/16 (100%)
Query: 11 CFKCGRPGHWSRDCPS 26
CFKCG+PGH++R+CPS
Sbjct: 131 CFKCGKPGHFARECPS 146
>gi|256088335|ref|XP_002580297.1| peptidyl-prolyl cis-trans isomerase h ppih [Schistosoma mansoni]
Length = 1652
Score = 36.6 bits (83), Expect = 8.2, Method: Composition-based stats.
Identities = 18/35 (51%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Query: 78 RPKLTPDLLLSDDGLGFVLRHFPRAFKYRGRGHEV 112
RPKL P LLS+ GL +L F + K+RG+G+EV
Sbjct: 1610 RPKLDPQRLLSNKGLPALLEDFKKV-KFRGKGYEV 1643
>gi|401884538|gb|EJT48693.1| mRNA polyadenylation-related protein [Trichosporon asahii var.
asahii CBS 2479]
Length = 563
Score = 36.6 bits (83), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Query: 1 MENAKAAPTG--CFKCGRPGHWSRDCPSSSSSAPSN 34
M K P G C++CG+ GHW ++CP +S S+
Sbjct: 189 MNTDKEPPVGYICYRCGQKGHWIQNCPKNSDPGASD 224
>gi|226495947|ref|NP_001141714.1| uncharacterized protein LOC100273843 [Zea mays]
gi|194705650|gb|ACF86909.1| unknown [Zea mays]
Length = 303
Score = 36.6 bits (83), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 13/20 (65%), Positives = 16/20 (80%)
Query: 8 PTGCFKCGRPGHWSRDCPSS 27
P C+KCG PGH +RDCPS+
Sbjct: 176 PGACYKCGEPGHMARDCPSA 195
>gi|302684257|ref|XP_003031809.1| hypothetical protein SCHCODRAFT_234930 [Schizophyllum commune H4-8]
gi|300105502|gb|EFI96906.1| hypothetical protein SCHCODRAFT_234930 [Schizophyllum commune H4-8]
Length = 1780
Score = 36.6 bits (83), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 12/21 (57%), Positives = 14/21 (66%)
Query: 5 KAAPTGCFKCGRPGHWSRDCP 25
K P CF CG P HW+R+CP
Sbjct: 1128 KPPPAPCFACGSPYHWNRECP 1148
>gi|154303132|ref|XP_001551974.1| hypothetical protein BC1G_09586 [Botryotinia fuckeliana B05.10]
Length = 524
Score = 36.6 bits (83), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 27/56 (48%), Gaps = 13/56 (23%)
Query: 6 AAPTGCFKCGRPGHWSRDCPSSSSSAPSNSNF------------PSNNTASGGGGG 49
AAPT CFKC + GH++ +CP++ PS F P N TA G G
Sbjct: 248 AAPT-CFKCRKTGHYANNCPTNGKGKPSEWAFSPLPHDKKDKHMPWNTTAMNGSLG 302
>gi|393247796|gb|EJD55303.1| hypothetical protein AURDEDRAFT_109681 [Auricularia delicata
TFB-10046 SS5]
Length = 523
Score = 36.6 bits (83), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 12/18 (66%), Positives = 15/18 (83%)
Query: 8 PTGCFKCGRPGHWSRDCP 25
P CFKCG+ GHW+R+CP
Sbjct: 169 PGACFKCGQMGHWARECP 186
>gi|444314443|ref|XP_004177879.1| hypothetical protein TBLA_0A05670 [Tetrapisispora blattae CBS 6284]
gi|387510918|emb|CCH58360.1| hypothetical protein TBLA_0A05670 [Tetrapisispora blattae CBS 6284]
Length = 173
Score = 36.6 bits (83), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 21/36 (58%)
Query: 11 CFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASGG 46
C+ CG GH SRDCPS +S+ F +N +GG
Sbjct: 68 CYSCGETGHMSRDCPSGNSNGRRGGRFHNNRGGAGG 103
>gi|54287629|gb|AAV31373.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 2408
Score = 36.6 bits (83), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 9/63 (14%)
Query: 8 PTGCFKCGRPGHWSRDCPS----SSSSAPSNSNFPS-----NNTASGGGGGGSGVGDGGV 58
P CF CG PGH++ CP ++ AP+NSN P+ N+ A+ V G
Sbjct: 317 PGVCFNCGDPGHYADKCPKPRRVKNAPAPNNSNAPAPKARVNHVAAAEAQNAPDVVLGTF 376
Query: 59 SVS 61
V+
Sbjct: 377 PVN 379
>gi|38345425|emb|CAD41546.2| OSJNBb0091E11.16 [Oryza sativa Japonica Group]
Length = 839
Score = 36.6 bits (83), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 7/42 (16%)
Query: 11 CFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASGGGGGGSG 52
CF CG+P HW+++CP S N GGG SG
Sbjct: 202 CFVCGKPRHWAKNCPDRKDKK-------SANMVISEGGGTSG 236
>gi|393231342|gb|EJD38936.1| hypothetical protein AURDEDRAFT_71766 [Auricularia delicata
TFB-10046 SS5]
Length = 1329
Score = 36.6 bits (83), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 24/45 (53%)
Query: 1 MENAKAAPTGCFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASG 45
+ A+A P C+ CG GH+SRDC + A ++ + +A G
Sbjct: 144 LARAEAVPPECYNCGEAGHFSRDCWKPRTQASLRADAAAGRSARG 188
>gi|417396563|gb|JAA45315.1| Putative e3 ubiquitin ligase [Desmodus rotundus]
Length = 178
Score = 36.6 bits (83), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 12/16 (75%), Positives = 15/16 (93%)
Query: 11 CFKCGRPGHWSRDCPS 26
CFKCGR GHW+R+CP+
Sbjct: 6 CFKCGRSGHWARECPT 21
>gi|58004789|gb|AAW62456.1| cellular nucleic acid binding protein mutant H128A [synthetic
construct]
Length = 178
Score = 36.6 bits (83), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 12/16 (75%), Positives = 15/16 (93%)
Query: 11 CFKCGRPGHWSRDCPS 26
CFKCGR GHW+R+CP+
Sbjct: 6 CFKCGRTGHWARECPT 21
>gi|58004785|gb|AAW62455.1| cellular nucleic acid binding protein mutant H128Q [synthetic
construct]
Length = 178
Score = 36.6 bits (83), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 12/16 (75%), Positives = 15/16 (93%)
Query: 11 CFKCGRPGHWSRDCPS 26
CFKCGR GHW+R+CP+
Sbjct: 6 CFKCGRTGHWARECPT 21
>gi|7263178|gb|AAF44118.1| cellular nucleic acid binding protein mutant H107Q [synthetic
construct]
Length = 178
Score = 36.6 bits (83), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 12/16 (75%), Positives = 15/16 (93%)
Query: 11 CFKCGRPGHWSRDCPS 26
CFKCGR GHW+R+CP+
Sbjct: 6 CFKCGRTGHWARECPT 21
>gi|305689985|gb|ADM64419.1| VASA protein [Eriocheir sinensis]
Length = 621
Score = 36.6 bits (83), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 30/65 (46%), Gaps = 15/65 (23%)
Query: 11 CFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASGGGGGGSGVGDGGVSVSKSAIGVKEK 70
CFKCG GH SR+CPS S + + S G G G+ G G G E+
Sbjct: 45 CFKCGEEGHISRNCPSGGSDS-------RRDKGSAGDGFGASSGSKG--------GDMEE 89
Query: 71 PKKLP 75
P++ P
Sbjct: 90 PERPP 94
>gi|310756752|gb|ADP20517.1| cellular nucleic acid binding protein [Fukomys anselli]
Length = 178
Score = 36.6 bits (83), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 12/16 (75%), Positives = 15/16 (93%)
Query: 11 CFKCGRPGHWSRDCPS 26
CFKCGR GHW+R+CP+
Sbjct: 6 CFKCGRTGHWARECPT 21
>gi|299752369|ref|XP_001830882.2| hypothetical protein CC1G_02333 [Coprinopsis cinerea okayama7#130]
gi|298409801|gb|EAU90946.2| hypothetical protein CC1G_02333 [Coprinopsis cinerea okayama7#130]
Length = 929
Score = 36.6 bits (83), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 17/26 (65%)
Query: 1 MENAKAAPTGCFKCGRPGHWSRDCPS 26
M N+ + CFKC +PGHWS CP+
Sbjct: 826 MGNSGTSKDVCFKCNQPGHWSNACPN 851
>gi|218184065|gb|EEC66492.1| hypothetical protein OsI_32588 [Oryza sativa Indica Group]
Length = 374
Score = 36.6 bits (83), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 21/44 (47%), Gaps = 7/44 (15%)
Query: 11 CFKCGRPGHWSRDCPSSSSSAPSNSNFPSNNTASGGGGGGSGVG 54
CF CG+ GHW++DC P + S N GGG S G
Sbjct: 260 CFVCGKSGHWAKDC-------PERKDRKSANMVISEGGGTSRYG 296
>gi|117643971|gb|ABK51662.1| gag protein [Human immunodeficiency virus 1]
Length = 497
Score = 36.6 bits (83), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 5/36 (13%)
Query: 10 GCFKCGRPGHWSRDCPSSSSS-----APSNSNFPSN 40
GC+KCGR GH +DCP ++ PSN P N
Sbjct: 409 GCWKCGREGHQMKDCPERQANFLGKVWPSNKGRPGN 444
>gi|7263180|gb|AAF44119.1| cellular nucleic acid binding protein mutant H128D [synthetic
construct]
Length = 178
Score = 36.6 bits (83), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 12/16 (75%), Positives = 15/16 (93%)
Query: 11 CFKCGRPGHWSRDCPS 26
CFKCGR GHW+R+CP+
Sbjct: 6 CFKCGRTGHWARECPT 21
>gi|297263145|ref|XP_001093980.2| PREDICTED: hypothetical protein LOC705622 [Macaca mulatta]
Length = 343
Score = 36.6 bits (83), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 12/16 (75%), Positives = 15/16 (93%)
Query: 11 CFKCGRPGHWSRDCPS 26
CFKCGR GHW+R+CP+
Sbjct: 179 CFKCGRSGHWARECPT 194
>gi|2665788|gb|AAB88490.1| cellular nucleic acid binding protein [Gallus gallus]
Length = 172
Score = 36.6 bits (83), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 12/16 (75%), Positives = 15/16 (93%)
Query: 11 CFKCGRPGHWSRDCPS 26
CFKCGR GHW+R+CP+
Sbjct: 6 CFKCGRTGHWARECPT 21
>gi|89269563|emb|CAJ82604.1| zinc finger protein 9 (a cellular retroviral nucleic acid binding
protein) [Xenopus (Silurana) tropicalis]
gi|115292111|gb|AAI22021.1| cnbp protein [Xenopus (Silurana) tropicalis]
Length = 177
Score = 36.6 bits (83), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 12/16 (75%), Positives = 15/16 (93%)
Query: 11 CFKCGRPGHWSRDCPS 26
CFKCGR GHW+R+CP+
Sbjct: 6 CFKCGRTGHWARECPT 21
>gi|45382487|ref|NP_990238.1| cellular nucleic acid-binding protein [Gallus gallus]
gi|6225175|sp|O42395.1|CNBP_CHICK RecName: Full=Cellular nucleic acid-binding protein; Short=CNBP;
AltName: Full=Zinc finger protein 9
gi|2232217|gb|AAB62243.1| cellular nucleic acid binding protein [Gallus gallus]
Length = 172
Score = 36.6 bits (83), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 12/16 (75%), Positives = 15/16 (93%)
Query: 11 CFKCGRPGHWSRDCPS 26
CFKCGR GHW+R+CP+
Sbjct: 6 CFKCGRTGHWARECPT 21
>gi|387017354|gb|AFJ50795.1| Cellular nucleic acid binding protein [Crotalus adamanteus]
Length = 171
Score = 36.6 bits (83), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 12/16 (75%), Positives = 15/16 (93%)
Query: 11 CFKCGRPGHWSRDCPS 26
CFKCGR GHW+R+CP+
Sbjct: 6 CFKCGRTGHWARECPT 21
>gi|302824155|ref|XP_002993723.1| hypothetical protein SELMODRAFT_187582 [Selaginella moellendorffii]
gi|300138447|gb|EFJ05215.1| hypothetical protein SELMODRAFT_187582 [Selaginella moellendorffii]
Length = 165
Score = 36.6 bits (83), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 14/17 (82%), Positives = 15/17 (88%)
Query: 10 GCFKCGRPGHWSRDCPS 26
GCFKCG+ GH SRDCPS
Sbjct: 114 GCFKCGQSGHISRDCPS 130
>gi|4929293|gb|AAD33937.1|AF144698_1 cellular nucleic acid binding protein [Rhinella arenarum]
Length = 178
Score = 36.6 bits (83), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 12/16 (75%), Positives = 15/16 (93%)
Query: 11 CFKCGRPGHWSRDCPS 26
CFKCGR GHW+R+CP+
Sbjct: 6 CFKCGRTGHWARECPT 21
>gi|449460018|ref|XP_004147743.1| PREDICTED: uncharacterized protein LOC101213376 [Cucumis sativus]
gi|449516453|ref|XP_004165261.1| PREDICTED: uncharacterized protein LOC101228208 [Cucumis sativus]
Length = 327
Score = 36.6 bits (83), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 12/14 (85%), Positives = 13/14 (92%)
Query: 11 CFKCGRPGHWSRDC 24
CFKCG PGHW+RDC
Sbjct: 309 CFKCGMPGHWARDC 322
>gi|387914596|gb|AFK10907.1| cellular nucleic acid-binding protein-like protein [Callorhinchus
milii]
Length = 167
Score = 36.6 bits (83), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 12/16 (75%), Positives = 15/16 (93%)
Query: 11 CFKCGRPGHWSRDCPS 26
CFKCGR GHW+R+CP+
Sbjct: 6 CFKCGRTGHWARECPT 21
>gi|350416927|ref|XP_003491172.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein lark-like
[Bombus impatiens]
Length = 458
Score = 36.6 bits (83), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 11/18 (61%), Positives = 15/18 (83%)
Query: 8 PTGCFKCGRPGHWSRDCP 25
P C++CGR GHWS++CP
Sbjct: 264 PEQCYRCGRGGHWSKECP 281
>gi|449473367|ref|XP_002187556.2| PREDICTED: cellular nucleic acid-binding protein isoform 1
[Taeniopygia guttata]
Length = 170
Score = 36.6 bits (83), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 12/16 (75%), Positives = 15/16 (93%)
Query: 11 CFKCGRPGHWSRDCPS 26
CFKCGR GHW+R+CP+
Sbjct: 6 CFKCGRTGHWARECPT 21
>gi|148666815|gb|EDK99231.1| cellular nucleic acid binding protein, isoform CRA_d [Mus
musculus]
Length = 204
Score = 36.6 bits (83), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 12/16 (75%), Positives = 15/16 (93%)
Query: 11 CFKCGRPGHWSRDCPS 26
CFKCGR GHW+R+CP+
Sbjct: 40 CFKCGRSGHWARECPT 55
>gi|187608738|ref|NP_001120666.1| cellular nucleic acid-binding protein isoform 4 [Homo sapiens]
gi|291393356|ref|XP_002713210.1| PREDICTED: zinc finger protein 9 isoform 2 [Oryctolagus
cuniculus]
gi|68359783|gb|AAY96755.1| cellular nucleic acid binding protein beta variant 2 [Homo
sapiens]
Length = 172
Score = 36.6 bits (83), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 12/16 (75%), Positives = 15/16 (93%)
Query: 11 CFKCGRPGHWSRDCPS 26
CFKCGR GHW+R+CP+
Sbjct: 6 CFKCGRSGHWARECPT 21
>gi|334342426|ref|XP_001378413.2| PREDICTED: cellular nucleic acid-binding protein-like isoform 1
[Monodelphis domestica]
gi|395516728|ref|XP_003762539.1| PREDICTED: cellular nucleic acid-binding protein isoform 1
[Sarcophilus harrisii]
Length = 177
Score = 36.6 bits (83), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 12/16 (75%), Positives = 15/16 (93%)
Query: 11 CFKCGRPGHWSRDCPS 26
CFKCGR GHW+R+CP+
Sbjct: 6 CFKCGRSGHWARECPT 21
>gi|327265859|ref|XP_003217725.1| PREDICTED: cellular nucleic acid-binding protein-like [Anolis
carolinensis]
Length = 170
Score = 36.6 bits (83), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 12/16 (75%), Positives = 15/16 (93%)
Query: 11 CFKCGRPGHWSRDCPS 26
CFKCGR GHW+R+CP+
Sbjct: 6 CFKCGRTGHWARECPT 21
>gi|242217710|ref|XP_002474652.1| predicted protein [Postia placenta Mad-698-R]
gi|220726182|gb|EED80140.1| predicted protein [Postia placenta Mad-698-R]
Length = 425
Score = 36.6 bits (83), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 43/115 (37%), Gaps = 19/115 (16%)
Query: 46 GGGGGSGVGDGGVSVSKSAIGVKEKPKKLPRSRPKLTPDLLLSDDGLGFVLRHFPRAFKY 105
SG K K KP PKL LL DG +++ + FK
Sbjct: 126 SSQNASGAARDNSKDDKDTTEKKRKP------LPKLDEARLLGPDGFPALVKQT-KNFKP 178
Query: 106 RGRGHEVSDLGHLIGLYSEWHSHLLPYYSFDHFVSKVEQVAASRRVKMCIRDLRD 160
+G+GHE W + P F V +VE++ S+R+ + + RD
Sbjct: 179 KGKGHEF------------WTHRMYPKTQFRDTVQRVEKLCHSKRMHVALSVWRD 221
>gi|213623438|gb|AAI69746.1| CNBP protein [Xenopus laevis]
Length = 178
Score = 36.6 bits (83), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 12/16 (75%), Positives = 15/16 (93%)
Query: 11 CFKCGRPGHWSRDCPS 26
CFKCGR GHW+R+CP+
Sbjct: 6 CFKCGRTGHWARECPT 21
>gi|32765948|gb|AAP69039.1| gag protein [Human immunodeficiency virus 1]
gi|32765950|gb|AAP69040.1| gag protein [Human immunodeficiency virus 1]
gi|32765952|gb|AAP69041.1| gag protein [Human immunodeficiency virus 1]
gi|32765956|gb|AAP69043.1| gag protein [Human immunodeficiency virus 1]
gi|34329773|gb|AAQ63981.1| gag protein [Human immunodeficiency virus 1]
Length = 492
Score = 36.6 bits (83), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 5/36 (13%)
Query: 10 GCFKCGRPGHWSRDCPSSSSS-----APSNSNFPSN 40
GC+KCGR GH +DCP ++ PSN P N
Sbjct: 404 GCWKCGREGHQMKDCPERQANFLGKIWPSNKGRPGN 439
>gi|7304969|ref|NP_038521.1| cellular nucleic acid-binding protein isoform 1 [Mus musculus]
gi|187608732|ref|NP_001120665.1| cellular nucleic acid-binding protein isoform 2 [Homo sapiens]
gi|395847858|ref|XP_003796581.1| PREDICTED: cellular nucleic acid-binding protein-like isoform 1
[Otolemur garnettii]
gi|395847860|ref|XP_003796582.1| PREDICTED: cellular nucleic acid-binding protein-like isoform 2
[Otolemur garnettii]
gi|395847862|ref|XP_003796583.1| PREDICTED: cellular nucleic acid-binding protein-like isoform 3
[Otolemur garnettii]
gi|50403746|sp|P53996.2|CNBP_MOUSE RecName: Full=Cellular nucleic acid-binding protein; Short=CNBP;
AltName: Full=Zinc finger protein 9
gi|854675|gb|AAB60490.1| cellular nucleic acid binding protein [Mus musculus]
gi|30059133|gb|AAO31613.1| cellular nucleic acid binding protein [Mus musculus]
gi|37194897|gb|AAH58723.1| Cellular nucleic acid binding protein [Mus musculus]
gi|40738015|gb|AAR89463.1| cellular nucleic acid binding protein [Mus musculus]
gi|54696094|gb|AAV38419.1| zinc finger protein 9 (a cellular retroviral nucleic acid binding
protein) [Homo sapiens]
gi|68304555|gb|AAY89856.1| cellular nucleic acid binding protein alpha variant 1 [Homo
sapiens]
gi|74194928|dbj|BAE26042.1| unnamed protein product [Mus musculus]
gi|74204641|dbj|BAE35390.1| unnamed protein product [Mus musculus]
gi|310756754|gb|ADP20518.1| cellular nucleic acid binding protein [Heterocephalus glaber]
Length = 178
Score = 36.6 bits (83), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 12/16 (75%), Positives = 15/16 (93%)
Query: 11 CFKCGRPGHWSRDCPS 26
CFKCGR GHW+R+CP+
Sbjct: 6 CFKCGRSGHWARECPT 21
>gi|389751418|gb|EIM92491.1| hypothetical protein STEHIDRAFT_127304 [Stereum hirsutum FP-91666
SS1]
Length = 454
Score = 36.6 bits (83), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 12/19 (63%), Positives = 16/19 (84%)
Query: 8 PTGCFKCGRPGHWSRDCPS 26
P CFKCG+ GHW+R+CP+
Sbjct: 165 PGACFKCGQMGHWARECPN 183
>gi|238015158|gb|ACR38614.1| unknown [Zea mays]
Length = 240
Score = 36.6 bits (83), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 13/20 (65%), Positives = 16/20 (80%)
Query: 8 PTGCFKCGRPGHWSRDCPSS 27
P C+KCG PGH +RDCPS+
Sbjct: 122 PGACYKCGEPGHMARDCPSA 141
>gi|363543235|ref|NP_001241832.1| uncharacterized protein LOC100857032 [Zea mays]
gi|224033945|gb|ACN36048.1| unknown [Zea mays]
gi|413926630|gb|AFW66562.1| hypothetical protein ZEAMMB73_047398 [Zea mays]
Length = 249
Score = 36.6 bits (83), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 13/20 (65%), Positives = 16/20 (80%)
Query: 8 PTGCFKCGRPGHWSRDCPSS 27
P C+KCG PGH +RDCPS+
Sbjct: 122 PGACYKCGEPGHMARDCPSA 141
>gi|354622939|ref|NP_001133217.2| zinc finger protein 9 [Salmo salar]
gi|221220712|gb|ACM09017.1| Cellular nucleic acid-binding protein [Salmo salar]
Length = 167
Score = 36.6 bits (83), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 12/19 (63%), Positives = 16/19 (84%)
Query: 11 CFKCGRPGHWSRDCPSSSS 29
CF+CGRPGHW ++CP + S
Sbjct: 9 CFRCGRPGHWIKNCPEAGS 27
>gi|187608726|ref|NP_001120664.1| cellular nucleic acid-binding protein isoform 1 [Homo sapiens]
gi|291393354|ref|XP_002713209.1| PREDICTED: zinc finger protein 9 isoform 1 [Oryctolagus
cuniculus]
gi|355564532|gb|EHH21032.1| hypothetical protein EGK_04008 [Macaca mulatta]
gi|355786375|gb|EHH66558.1| hypothetical protein EGM_03574 [Macaca fascicularis]
Length = 179
Score = 36.6 bits (83), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 12/16 (75%), Positives = 15/16 (93%)
Query: 11 CFKCGRPGHWSRDCPS 26
CFKCGR GHW+R+CP+
Sbjct: 6 CFKCGRSGHWARECPT 21
>gi|392881264|gb|AFM89464.1| cellular nucleic acid-binding protein-like protein [Callorhinchus
milii]
Length = 167
Score = 36.6 bits (83), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 12/16 (75%), Positives = 15/16 (93%)
Query: 11 CFKCGRPGHWSRDCPS 26
CFKCGR GHW+R+CP+
Sbjct: 6 CFKCGRTGHWARECPT 21
>gi|123325507|gb|ABM74410.1| vasa protein [Botrylloides violaceus]
Length = 630
Score = 36.6 bits (83), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 13/16 (81%), Positives = 13/16 (81%)
Query: 10 GCFKCGRPGHWSRDCP 25
GCFKCG GH SRDCP
Sbjct: 42 GCFKCGEEGHMSRDCP 57
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.135 0.416
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,286,718,649
Number of Sequences: 23463169
Number of extensions: 199695094
Number of successful extensions: 1823728
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1228
Number of HSP's successfully gapped in prelim test: 828
Number of HSP's that attempted gapping in prelim test: 1808340
Number of HSP's gapped (non-prelim): 11537
length of query: 244
length of database: 8,064,228,071
effective HSP length: 139
effective length of query: 105
effective length of database: 9,097,814,876
effective search space: 955270561980
effective search space used: 955270561980
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 75 (33.5 bits)