Query 035856
Match_columns 278
No_of_seqs 207 out of 1722
Neff 9.5
Searched_HMMs 46136
Date Fri Mar 29 07:04:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/035856.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/035856hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02410 UDP-glucoronosyl/UDP- 100.0 1.3E-50 2.8E-55 365.4 27.2 263 6-278 56-406 (451)
2 PLN02173 UDP-glucosyl transfer 100.0 7.2E-50 1.6E-54 359.2 26.1 264 5-278 54-404 (449)
3 PLN02152 indole-3-acetate beta 100.0 7.6E-49 1.6E-53 353.2 24.8 264 6-278 57-413 (455)
4 PLN00414 glycosyltransferase f 100.0 7.9E-49 1.7E-53 353.3 24.8 265 4-278 54-398 (446)
5 PLN02764 glycosyltransferase f 100.0 1.1E-48 2.4E-53 350.8 25.2 261 7-278 60-403 (453)
6 PLN02208 glycosyltransferase f 100.0 1.6E-48 3.5E-53 350.9 24.8 263 4-278 54-397 (442)
7 PLN02555 limonoid glucosyltran 100.0 2.3E-48 4.9E-53 352.2 25.7 263 7-278 69-425 (480)
8 PLN03004 UDP-glycosyltransfera 100.0 3.6E-48 7.8E-53 348.4 24.9 265 6-278 63-420 (451)
9 PLN02670 transferase, transfer 100.0 4.9E-48 1.1E-52 349.0 25.6 264 5-278 58-425 (472)
10 PLN02207 UDP-glycosyltransfera 100.0 7.1E-48 1.5E-52 347.6 25.4 266 6-278 62-422 (468)
11 PLN02167 UDP-glycosyltransfera 100.0 8.7E-48 1.9E-52 350.6 24.8 267 6-278 63-430 (475)
12 PLN00164 glucosyltransferase; 100.0 1.2E-47 2.7E-52 349.1 24.0 259 6-278 67-427 (480)
13 PLN02534 UDP-glycosyltransfera 100.0 2.9E-47 6.3E-52 345.5 25.6 266 6-278 64-440 (491)
14 PLN02863 UDP-glucoronosyl/UDP- 100.0 3.5E-47 7.5E-52 345.3 25.8 265 6-277 61-428 (477)
15 PLN02562 UDP-glycosyltransfera 100.0 6.3E-47 1.4E-51 342.1 25.7 258 6-278 58-409 (448)
16 PLN02210 UDP-glucosyl transfer 100.0 8.4E-47 1.8E-51 341.7 25.4 257 6-278 62-411 (456)
17 PLN03015 UDP-glucosyl transfer 100.0 2.1E-46 4.5E-51 337.1 25.9 261 6-278 61-422 (470)
18 PLN02992 coniferyl-alcohol glu 100.0 3.9E-46 8.5E-51 337.0 25.6 257 6-278 58-423 (481)
19 PLN02448 UDP-glycosyltransfera 100.0 4.8E-46 1E-50 338.3 25.4 263 5-278 62-411 (459)
20 PLN02554 UDP-glycosyltransfera 100.0 5.3E-46 1.2E-50 339.3 24.2 261 6-278 64-436 (481)
21 PLN03007 UDP-glucosyltransfera 100.0 1E-44 2.3E-49 331.2 25.4 264 6-278 65-436 (482)
22 PHA03392 egt ecdysteroid UDP-g 100.0 1.6E-31 3.5E-36 245.1 15.2 219 47-278 127-428 (507)
23 PF00201 UDPGT: UDP-glucoronos 100.0 1.4E-33 3E-38 260.8 -7.8 125 146-278 239-405 (500)
24 KOG1192 UDP-glucuronosyl and U 100.0 6.9E-30 1.5E-34 236.0 8.7 226 31-265 89-406 (496)
25 cd03784 GT1_Gtf_like This fami 99.9 2.7E-24 5.8E-29 193.6 16.4 81 194-277 287-367 (401)
26 TIGR01426 MGT glycosyltransfer 99.9 6.1E-23 1.3E-27 184.3 21.7 82 193-277 273-354 (392)
27 COG1819 Glycosyl transferases, 99.8 1.8E-18 3.9E-23 155.1 7.9 84 192-278 281-364 (406)
28 PF13528 Glyco_trans_1_3: Glyc 99.6 5.1E-14 1.1E-18 122.9 20.2 82 194-278 231-316 (318)
29 TIGR00661 MJ1255 conserved hyp 99.5 1.1E-12 2.4E-17 114.8 17.2 72 193-267 227-302 (321)
30 PF04101 Glyco_tran_28_C: Glyc 99.2 1.1E-11 2.4E-16 98.1 4.6 81 195-278 55-140 (167)
31 PRK12446 undecaprenyldiphospho 98.9 2.7E-09 5.8E-14 94.5 6.3 77 198-277 237-320 (352)
32 PRK00726 murG undecaprenyldiph 98.5 3.4E-07 7.3E-12 81.2 7.5 78 197-277 237-319 (357)
33 COG0707 MurG UDP-N-acetylgluco 98.4 6.8E-07 1.5E-11 78.9 6.8 78 197-277 237-319 (357)
34 cd03785 GT1_MurG MurG is an N- 98.3 2.5E-06 5.4E-11 75.3 7.8 80 195-277 235-319 (350)
35 PRK13609 diacylglycerol glucos 98.2 0.00014 3E-09 65.2 17.9 76 195-277 256-333 (380)
36 PLN02605 monogalactosyldiacylg 98.2 0.00026 5.5E-09 63.6 18.6 76 195-277 265-342 (382)
37 TIGR01133 murG undecaprenyldip 98.0 1.5E-05 3.3E-10 70.2 6.6 71 204-277 243-316 (348)
38 TIGR03590 PseG pseudaminic aci 97.9 1E-05 2.2E-10 69.4 4.6 54 195-251 224-278 (279)
39 COG4671 Predicted glycosyl tra 97.9 2.6E-05 5.6E-10 67.1 6.6 80 195-277 277-360 (400)
40 PRK13608 diacylglycerol glucos 97.8 8E-05 1.7E-09 67.1 7.4 75 195-276 256-332 (391)
41 TIGR00215 lpxB lipid-A-disacch 97.5 0.00055 1.2E-08 61.5 9.5 68 206-277 262-342 (385)
42 cd03814 GT1_like_2 This family 97.5 0.0072 1.6E-07 52.7 16.3 75 194-277 246-327 (364)
43 cd03800 GT1_Sucrose_synthase T 96.9 0.091 2E-06 46.7 17.1 74 195-277 283-363 (398)
44 KOG3349 Predicted glycosyltran 96.6 0.0031 6.8E-08 47.8 3.9 53 201-255 69-126 (170)
45 cd03817 GT1_UGDG_like This fam 96.6 0.21 4.5E-06 43.4 16.2 65 194-265 258-329 (374)
46 cd03798 GT1_wlbH_like This fam 96.4 0.32 6.9E-06 42.0 16.2 77 194-277 258-339 (377)
47 PRK05749 3-deoxy-D-manno-octul 96.2 0.62 1.3E-05 42.3 17.9 64 206-276 314-382 (425)
48 PLN02871 UDP-sulfoquinovose:DA 96.1 0.63 1.4E-05 42.9 17.6 74 195-277 312-395 (465)
49 cd04949 GT1_gtfA_like This fam 95.4 0.3 6.6E-06 43.2 11.9 78 194-277 260-340 (372)
50 TIGR03492 conserved hypothetic 95.1 0.043 9.3E-07 49.5 5.7 67 205-277 290-359 (396)
51 COG5017 Uncharacterized conser 94.9 0.025 5.5E-07 42.3 2.8 55 206-263 60-122 (161)
52 cd03820 GT1_amsD_like This fam 94.5 2.1 4.6E-05 36.4 14.6 74 195-277 235-314 (348)
53 cd05844 GT1_like_7 Glycosyltra 94.5 0.088 1.9E-06 46.4 5.9 75 194-277 244-331 (367)
54 cd03823 GT1_ExpE7_like This fa 94.2 0.17 3.6E-06 43.9 7.0 77 194-277 242-324 (359)
55 cd03795 GT1_like_4 This family 94.0 0.16 3.5E-06 44.3 6.5 78 194-277 243-327 (357)
56 COG1519 KdtA 3-deoxy-D-manno-o 93.6 0.13 2.9E-06 45.9 5.1 46 217-264 327-372 (419)
57 PF00534 Glycos_transf_1: Glyc 93.5 0.19 4.1E-06 39.1 5.6 75 194-277 72-153 (172)
58 PF13692 Glyco_trans_1_4: Glyc 93.5 0.083 1.8E-06 39.4 3.3 74 195-277 53-130 (135)
59 PRK00025 lpxB lipid-A-disaccha 93.1 0.081 1.8E-06 47.2 3.1 34 206-242 256-289 (380)
60 cd03801 GT1_YqgM_like This fam 93.1 0.22 4.9E-06 42.8 5.9 76 193-277 254-336 (374)
61 cd03794 GT1_wbuB_like This fam 92.9 0.25 5.5E-06 43.0 6.0 77 194-277 274-360 (394)
62 cd03804 GT1_wbaZ_like This fam 92.8 0.14 3E-06 45.0 4.2 78 193-277 240-321 (351)
63 PF02684 LpxB: Lipid-A-disacch 92.7 1.7 3.6E-05 39.0 10.7 69 205-277 254-335 (373)
64 cd04946 GT1_AmsK_like This fam 92.5 0.4 8.8E-06 43.4 6.8 77 195-277 289-372 (407)
65 TIGR00236 wecB UDP-N-acetylglu 92.4 0.48 1E-05 42.1 7.1 72 195-277 255-329 (365)
66 PRK15427 colanic acid biosynth 92.4 0.39 8.4E-06 43.5 6.6 76 193-277 277-365 (406)
67 PRK15484 lipopolysaccharide 1, 92.3 0.4 8.8E-06 42.9 6.5 76 194-277 256-339 (380)
68 cd03786 GT1_UDP-GlcNAc_2-Epime 91.8 0.41 8.8E-06 42.3 6.0 72 195-277 258-332 (363)
69 cd03799 GT1_amsK_like This is 91.7 0.46 9.9E-06 41.3 6.1 77 194-277 235-322 (355)
70 PRK14089 ipid-A-disaccharide s 91.0 0.1 2.2E-06 46.1 1.2 68 206-277 230-314 (347)
71 PLN02275 transferase, transfer 90.5 0.86 1.9E-05 40.6 6.7 71 196-277 287-368 (371)
72 TIGR02918 accessory Sec system 90.2 6.7 0.00015 36.7 12.5 64 194-263 375-442 (500)
73 TIGR03449 mycothiol_MshA UDP-N 90.0 0.8 1.7E-05 41.1 6.2 75 194-277 282-363 (405)
74 cd03818 GT1_ExpC_like This fam 89.8 0.51 1.1E-05 42.4 4.7 76 195-277 281-361 (396)
75 PLN02501 digalactosyldiacylgly 89.8 9.6 0.00021 37.1 13.0 43 199-243 605-652 (794)
76 cd03821 GT1_Bme6_like This fam 89.8 1.1 2.5E-05 38.7 6.8 75 194-277 261-340 (375)
77 cd03808 GT1_cap1E_like This fa 89.7 0.81 1.8E-05 39.3 5.8 73 196-277 247-324 (359)
78 PF04007 DUF354: Protein of un 89.5 14 0.00031 32.6 15.8 48 206-258 243-290 (335)
79 COG3980 spsG Spore coat polysa 89.2 0.54 1.2E-05 39.9 4.0 67 195-265 210-277 (318)
80 cd03807 GT1_WbnK_like This fam 89.1 1 2.3E-05 38.8 6.0 72 195-277 251-327 (365)
81 PF03033 Glyco_transf_28: Glyc 88.8 0.64 1.4E-05 34.9 3.9 36 56-91 100-135 (139)
82 PRK09814 beta-1,6-galactofuran 88.6 1.8 3.9E-05 38.0 7.2 74 194-276 206-294 (333)
83 cd03811 GT1_WabH_like This fam 88.3 1.2 2.6E-05 38.1 5.8 72 194-272 245-319 (353)
84 TIGR03087 stp1 sugar transfera 87.4 0.94 2E-05 40.7 4.8 74 195-277 280-357 (397)
85 TIGR02472 sucr_P_syn_N sucrose 87.2 1.5 3.3E-05 40.1 6.0 77 194-277 316-401 (439)
86 cd04962 GT1_like_5 This family 87.0 1.2 2.6E-05 39.2 5.1 74 194-276 252-330 (371)
87 cd03825 GT1_wcfI_like This fam 87.0 1.2 2.5E-05 38.9 5.0 75 194-277 243-325 (365)
88 cd03802 GT1_AviGT4_like This f 87.0 1.2 2.5E-05 38.5 5.0 75 194-277 223-303 (335)
89 PRK15179 Vi polysaccharide bio 86.9 1.8 3.9E-05 42.1 6.5 77 193-276 572-653 (694)
90 cd03819 GT1_WavL_like This fam 86.8 1.6 3.5E-05 37.9 5.9 76 194-276 245-324 (355)
91 cd03822 GT1_ecORF704_like This 86.7 1.4 3.1E-05 38.2 5.4 76 194-277 246-329 (366)
92 PRK09922 UDP-D-galactose:(gluc 86.2 2.1 4.6E-05 37.8 6.3 76 193-277 234-319 (359)
93 PF13844 Glyco_transf_41: Glyc 85.6 0.49 1.1E-05 43.4 1.9 62 194-260 341-411 (468)
94 TIGR03088 stp2 sugar transfera 85.1 1.3 2.9E-05 39.1 4.5 76 195-277 255-333 (374)
95 PRK10307 putative glycosyl tra 85.1 3.7 8E-05 37.0 7.4 76 195-277 284-368 (412)
96 cd03805 GT1_ALG2_like This fam 83.9 2.5 5.4E-05 37.5 5.7 74 194-277 279-359 (392)
97 cd03816 GT1_ALG1_like This fam 83.6 3 6.5E-05 37.8 6.1 71 196-277 295-376 (415)
98 TIGR02149 glgA_Coryne glycogen 81.2 3.2 7E-05 36.8 5.3 69 201-276 267-346 (388)
99 cd04951 GT1_WbdM_like This fam 80.6 2.7 5.8E-05 36.5 4.6 72 194-276 244-320 (360)
100 cd04950 GT1_like_1 Glycosyltra 80.0 4.2 9.1E-05 36.2 5.7 73 194-277 253-335 (373)
101 cd03813 GT1_like_3 This family 79.8 4.9 0.00011 37.2 6.2 76 194-277 353-437 (475)
102 cd03812 GT1_CapH_like This fam 78.2 6.6 0.00014 34.1 6.3 76 194-277 248-326 (358)
103 cd04955 GT1_like_6 This family 77.9 3.6 7.9E-05 35.8 4.5 46 194-241 247-300 (363)
104 cd03796 GT1_PIG-A_like This fa 77.5 3.3 7.1E-05 37.2 4.2 47 194-242 249-302 (398)
105 COG3914 Spy Predicted O-linked 76.7 3.1 6.6E-05 39.0 3.7 49 195-247 489-543 (620)
106 cd03809 GT1_mtfB_like This fam 74.8 4.7 0.0001 34.9 4.4 48 194-241 252-304 (365)
107 PHA01633 putative glycosyl tra 72.6 11 0.00023 33.3 6.0 80 193-277 199-302 (335)
108 cd01635 Glycosyltransferase_GT 70.8 7.8 0.00017 30.8 4.5 49 194-244 160-216 (229)
109 PF06925 MGDG_synth: Monogalac 70.6 18 0.00038 28.2 6.4 42 42-85 77-124 (169)
110 PRK01021 lpxB lipid-A-disaccha 69.6 27 0.0006 33.3 8.2 68 206-276 483-566 (608)
111 PF12000 Glyco_trans_4_3: Gkyc 68.0 58 0.0013 25.7 9.0 42 42-84 53-95 (171)
112 PRK15490 Vi polysaccharide bio 67.6 14 0.00031 35.0 5.9 65 194-265 454-523 (578)
113 PF02350 Epimerase_2: UDP-N-ac 67.4 2.2 4.8E-05 37.8 0.6 71 195-277 239-313 (346)
114 cd03806 GT1_ALG11_like This fa 64.2 11 0.00025 34.2 4.6 73 194-277 304-387 (419)
115 COG0299 PurN Folate-dependent 60.5 21 0.00045 28.8 4.8 44 42-85 14-58 (200)
116 PLN02949 transferase, transfer 56.5 22 0.00048 32.9 5.1 47 194-242 334-387 (463)
117 PRK10125 putative glycosyl tra 55.5 24 0.00053 31.9 5.2 51 207-265 302-356 (405)
118 PF07429 Glyco_transf_56: 4-al 55.2 32 0.00069 30.5 5.5 78 195-277 245-328 (360)
119 KOG4626 O-linked N-acetylgluco 55.1 6.6 0.00014 37.3 1.4 42 221-263 846-888 (966)
120 PRK14098 glycogen synthase; Pr 55.0 16 0.00034 34.1 3.9 79 194-277 361-446 (489)
121 PF05159 Capsule_synth: Capsul 54.4 22 0.00049 30.0 4.5 40 198-240 186-225 (269)
122 PF07881 Fucose_iso_N1: L-fuco 53.8 48 0.001 26.0 5.7 64 6-76 5-72 (171)
123 cd07038 TPP_PYR_PDC_IPDC_like 53.0 23 0.00051 27.5 4.1 27 214-240 60-92 (162)
124 PRK02797 4-alpha-L-fucosyltran 51.7 41 0.0009 29.3 5.6 76 195-275 206-287 (322)
125 PLN00142 sucrose synthase 51.4 1.2E+02 0.0026 30.4 9.3 54 216-276 669-726 (815)
126 TIGR02470 sucr_synth sucrose s 50.7 1.4E+02 0.0029 29.9 9.5 46 224-276 658-703 (784)
127 COG0052 RpsB Ribosomal protein 50.6 26 0.00057 29.3 4.1 36 55-90 155-192 (252)
128 PRK14089 ipid-A-disaccharide s 50.1 43 0.00092 29.8 5.7 48 42-90 63-115 (347)
129 PF06506 PrpR_N: Propionate ca 49.5 28 0.00061 27.4 4.1 42 39-86 111-152 (176)
130 COG2230 Cfa Cyclopropane fatty 48.5 22 0.00048 30.5 3.4 38 221-259 81-121 (283)
131 cd03792 GT1_Trehalose_phosphor 47.2 28 0.00061 30.7 4.2 63 194-263 251-322 (372)
132 TIGR03123 one_C_unchar_1 proba 46.8 68 0.0015 28.1 6.3 55 29-84 252-306 (318)
133 PF00862 Sucrose_synth: Sucros 46.1 26 0.00057 32.6 3.7 85 48-140 393-482 (550)
134 cd07037 TPP_PYR_MenD Pyrimidin 44.5 25 0.00054 27.5 3.0 28 213-240 60-93 (162)
135 COG4370 Uncharacterized protei 44.0 19 0.00042 31.2 2.4 67 194-263 293-362 (412)
136 PF06258 Mito_fiss_Elm1: Mitoc 43.3 48 0.001 28.9 4.9 59 203-262 220-280 (311)
137 TIGR02468 sucrsPsyn_pln sucros 43.3 1.3E+02 0.0029 31.0 8.4 76 195-277 548-632 (1050)
138 PLN00142 sucrose synthase 42.8 37 0.0008 33.8 4.4 38 48-85 400-439 (815)
139 PHA02542 41 41 helicase; Provi 42.6 52 0.0011 30.6 5.2 45 41-85 286-352 (473)
140 cd07039 TPP_PYR_POX Pyrimidine 42.3 29 0.00062 27.1 3.1 28 213-240 63-96 (164)
141 COG0438 RfaG Glycosyltransfera 42.3 72 0.0016 26.5 5.9 45 195-241 257-308 (381)
142 cd01141 TroA_d Periplasmic bin 42.0 43 0.00093 26.3 4.1 38 44-84 60-99 (186)
143 CHL00076 chlB photochlorophyll 41.9 39 0.00085 31.7 4.4 33 47-84 367-399 (513)
144 cd06559 Endonuclease_V Endonuc 41.7 29 0.00064 28.3 3.1 38 46-83 83-127 (208)
145 cd01981 Pchlide_reductase_B Pc 41.7 41 0.00088 30.7 4.4 35 46-85 362-396 (430)
146 PF07355 GRDB: Glycine/sarcosi 40.9 67 0.0014 28.5 5.2 37 46-84 72-118 (349)
147 TIGR02470 sucr_synth sucrose s 40.2 42 0.00092 33.3 4.4 36 48-83 377-414 (784)
148 TIGR01278 DPOR_BchB light-inde 40.1 46 0.001 31.3 4.5 35 46-85 356-390 (511)
149 PLN02846 digalactosyldiacylgly 39.6 36 0.00078 31.5 3.7 39 201-241 290-332 (462)
150 PRK04940 hypothetical protein; 39.0 1.1E+02 0.0025 24.3 5.9 45 42-86 46-91 (180)
151 cd03466 Nitrogenase_NifN_2 Nit 38.7 51 0.0011 30.2 4.5 34 46-84 364-397 (429)
152 PF13524 Glyco_trans_1_2: Glyc 37.9 74 0.0016 21.5 4.3 21 221-241 10-30 (92)
153 TIGR01285 nifN nitrogenase mol 37.5 53 0.0012 30.1 4.4 34 46-84 365-398 (432)
154 TIGR02095 glgA glycogen/starch 37.3 45 0.00098 30.7 4.0 75 194-276 345-431 (473)
155 PRK03359 putative electron tra 37.3 78 0.0017 26.8 5.1 40 44-85 102-147 (256)
156 PRK02910 light-independent pro 37.3 55 0.0012 30.8 4.6 34 46-84 354-387 (519)
157 PF07894 DUF1669: Protein of u 37.1 67 0.0014 27.6 4.6 47 39-86 132-183 (284)
158 PF06345 Drf_DAD: DRF Autoregu 37.0 29 0.00064 15.1 1.3 12 223-234 3-14 (15)
159 PRK12311 rpsB 30S ribosomal pr 36.2 47 0.001 29.2 3.6 36 55-90 151-188 (326)
160 TIGR02468 sucrsPsyn_pln sucros 36.1 49 0.0011 33.9 4.2 30 56-85 310-341 (1050)
161 cd07035 TPP_PYR_POX_like Pyrim 35.9 99 0.0022 23.4 5.2 27 214-240 60-92 (155)
162 cd03791 GT1_Glycogen_synthase_ 35.4 24 0.00052 32.4 1.9 78 194-277 350-437 (476)
163 TIGR03713 acc_sec_asp1 accesso 34.5 24 0.00053 33.2 1.8 41 195-237 409-455 (519)
164 COG0763 LpxB Lipid A disacchar 34.5 1.3E+02 0.0029 27.0 6.2 66 208-277 261-339 (381)
165 cd01965 Nitrogenase_MoFe_beta_ 34.3 63 0.0014 29.5 4.4 26 56-84 371-396 (428)
166 PHA01630 putative group 1 glyc 34.1 33 0.00071 30.2 2.4 41 202-242 197-242 (331)
167 PRK13608 diacylglycerol glucos 34.1 58 0.0013 29.2 4.1 38 46-85 96-135 (391)
168 PF01497 Peripla_BP_2: Peripla 34.0 68 0.0015 26.0 4.3 40 45-87 52-93 (238)
169 cd01147 HemV-2 Metal binding p 33.4 72 0.0016 26.4 4.4 40 44-86 65-107 (262)
170 TIGR01286 nifK nitrogenase mol 32.8 72 0.0016 30.1 4.5 26 56-84 437-462 (515)
171 TIGR00236 wecB UDP-N-acetylglu 31.8 1.1E+02 0.0025 26.8 5.6 36 46-83 78-116 (365)
172 cd01980 Chlide_reductase_Y Chl 31.8 84 0.0018 28.6 4.8 28 55-85 349-376 (416)
173 cd03786 GT1_UDP-GlcNAc_2-Epime 31.6 1.2E+02 0.0025 26.5 5.6 29 56-84 88-119 (363)
174 PRK12342 hypothetical protein; 31.5 1.1E+02 0.0024 25.8 5.1 39 45-85 100-144 (254)
175 TIGR01917 gly_red_sel_B glycin 31.3 1.1E+02 0.0023 28.0 5.1 38 45-84 67-114 (431)
176 TIGR01918 various_sel_PB selen 31.2 1.1E+02 0.0023 28.0 5.1 37 46-84 68-114 (431)
177 PF02350 Epimerase_2: UDP-N-ac 30.8 1.1E+02 0.0024 27.0 5.3 31 56-86 67-100 (346)
178 PF00391 PEP-utilizers: PEP-ut 30.7 74 0.0016 21.3 3.2 29 56-84 30-60 (80)
179 cd01976 Nitrogenase_MoFe_alpha 30.4 69 0.0015 29.3 3.9 26 56-84 369-394 (421)
180 cd01974 Nitrogenase_MoFe_beta 30.0 85 0.0018 28.8 4.5 26 56-84 377-402 (435)
181 PF05728 UPF0227: Uncharacteri 29.7 1.8E+02 0.0039 23.2 5.8 43 45-87 48-91 (187)
182 PLN02331 phosphoribosylglycina 29.5 1.2E+02 0.0025 24.8 4.8 43 42-84 13-56 (207)
183 TIGR00173 menD 2-succinyl-5-en 29.0 93 0.002 28.4 4.6 27 213-239 63-95 (432)
184 KOG0595 Serine/threonine-prote 28.9 19 0.00041 32.4 0.0 66 194-262 126-204 (429)
185 TIGR02015 BchY chlorophyllide 28.8 88 0.0019 28.6 4.3 27 55-84 354-380 (422)
186 TIGR03568 NeuC_NnaA UDP-N-acet 28.4 42 0.00092 29.9 2.2 42 195-239 262-306 (365)
187 COG4671 Predicted glycosyl tra 28.4 73 0.0016 28.4 3.5 13 56-69 106-118 (400)
188 PF07131 DUF1382: Protein of u 28.0 30 0.00064 21.9 0.8 9 5-13 22-30 (61)
189 cd01143 YvrC Periplasmic bindi 27.8 1.2E+02 0.0025 23.8 4.5 39 44-85 51-90 (195)
190 PF00282 Pyridoxal_deC: Pyrido 26.9 1.4E+02 0.0031 26.7 5.3 61 215-277 105-186 (373)
191 PF06204 CBM_X: Putative carbo 26.4 33 0.00071 22.4 0.8 23 202-224 24-46 (66)
192 PRK09219 xanthine phosphoribos 26.4 1.8E+02 0.0039 23.3 5.3 31 56-86 50-82 (189)
193 PRK14478 nitrogenase molybdenu 26.2 76 0.0017 29.5 3.5 24 56-82 393-416 (475)
194 TIGR02919 accessory Sec system 26.0 57 0.0012 30.0 2.6 46 195-240 328-378 (438)
195 KOG1053 Glutamate-gated NMDA-t 25.9 34 0.00075 34.1 1.2 73 6-84 688-760 (1258)
196 cd03785 GT1_MurG MurG is an N- 25.8 1.3E+02 0.0028 26.0 4.8 29 55-83 88-118 (350)
197 PRK00025 lpxB lipid-A-disaccha 25.8 1.3E+02 0.0028 26.5 4.9 38 46-85 77-117 (380)
198 COG0503 Apt Adenine/guanine ph 25.7 1.8E+02 0.004 23.0 5.2 30 56-85 53-84 (179)
199 PRK10017 colanic acid biosynth 25.6 1.1E+02 0.0025 27.9 4.5 64 207-277 323-387 (426)
200 PF02603 Hpr_kinase_N: HPr Ser 25.6 72 0.0016 23.7 2.7 45 39-85 67-113 (127)
201 PF02776 TPP_enzyme_N: Thiamin 25.4 85 0.0018 24.4 3.2 29 213-241 64-98 (172)
202 PF04493 Endonuclease_5: Endon 25.3 1.1E+02 0.0024 24.9 3.9 35 50-84 83-124 (206)
203 TIGR02329 propionate_PrpR prop 25.2 1.6E+02 0.0035 27.8 5.5 40 40-85 132-171 (526)
204 TIGR03568 NeuC_NnaA UDP-N-acet 24.9 1.7E+02 0.0037 26.0 5.4 38 46-85 85-125 (365)
205 COG0707 MurG UDP-N-acetylgluco 24.8 3.6E+02 0.0078 24.1 7.4 29 56-84 91-121 (357)
206 PF10087 DUF2325: Uncharacteri 24.6 1.3E+02 0.0028 20.9 3.7 36 55-90 47-88 (97)
207 cd01018 ZntC Metal binding pro 24.6 2.2E+02 0.0048 24.0 5.8 43 41-86 205-249 (266)
208 KOG0081 GTPase Rab27, small G 24.4 2.6E+02 0.0057 21.9 5.5 45 42-86 109-164 (219)
209 PRK05299 rpsB 30S ribosomal pr 24.2 90 0.0019 26.5 3.3 36 55-90 156-193 (258)
210 PF01372 Melittin: Melittin; 24.0 15 0.00033 18.7 -0.8 17 222-238 1-17 (26)
211 cd01425 RPS2 Ribosomal protein 23.8 95 0.002 24.9 3.2 35 55-89 126-162 (193)
212 cd01973 Nitrogenase_VFe_beta_l 23.8 1.3E+02 0.0027 27.9 4.4 25 56-83 381-405 (454)
213 TIGR00679 hpr-ser Hpr(Ser) kin 23.3 3.1E+02 0.0067 23.9 6.4 50 36-87 65-116 (304)
214 PF13407 Peripla_BP_4: Peripla 23.3 2E+02 0.0042 23.5 5.3 41 43-86 45-89 (257)
215 TIGR01862 N2-ase-Ialpha nitrog 23.3 87 0.0019 28.8 3.3 25 56-83 387-411 (443)
216 PF12965 DUF3854: Domain of un 23.2 84 0.0018 23.5 2.6 34 207-241 4-37 (130)
217 TIGR01284 alt_nitrog_alph nitr 23.0 75 0.0016 29.4 2.8 33 46-83 387-419 (457)
218 TIGR02931 anfK_nitrog Fe-only 22.8 1.5E+02 0.0032 27.5 4.6 26 55-83 387-412 (461)
219 PRK06321 replicative DNA helic 22.7 1.9E+02 0.0041 26.9 5.4 42 42-85 324-387 (472)
220 PRK02277 orotate phosphoribosy 22.5 2.6E+02 0.0056 22.5 5.6 31 54-84 83-115 (200)
221 PRK12404 stage V sporulation p 22.5 1.9E+02 0.0041 25.5 4.9 46 40-85 56-107 (334)
222 COG0381 WecB UDP-N-acetylgluco 22.4 2.2E+02 0.0048 25.7 5.4 50 195-247 262-314 (383)
223 COG1435 Tdk Thymidine kinase [ 22.4 1E+02 0.0022 25.0 3.1 30 56-85 82-118 (201)
224 TIGR01011 rpsB_bact ribosomal 22.0 1.1E+02 0.0024 25.3 3.4 36 55-90 154-191 (225)
225 PRK00654 glgA glycogen synthas 21.9 50 0.0011 30.4 1.4 65 207-276 352-422 (466)
226 COG2099 CobK Precorrin-6x redu 21.8 2.3E+02 0.0051 23.9 5.1 40 44-85 56-101 (257)
227 TIGR00347 bioD dethiobiotin sy 21.7 1.5E+02 0.0033 22.6 4.0 33 55-87 98-139 (166)
228 TIGR01133 murG undecaprenyldip 21.7 1.7E+02 0.0037 25.2 4.7 36 46-83 82-119 (348)
229 TIGR00715 precor6x_red precorr 21.6 2.3E+02 0.0049 24.0 5.2 38 46-85 57-100 (256)
230 PF09988 DUF2227: Uncharacteri 21.5 31 0.00066 27.2 -0.0 28 197-227 60-89 (169)
231 cd03793 GT1_Glycogen_synthase_ 21.4 99 0.0022 29.6 3.2 39 204-242 467-507 (590)
232 TIGR00143 hypF [NiFe] hydrogen 21.1 2E+02 0.0044 28.3 5.4 44 42-85 401-445 (711)
233 COG0381 WecB UDP-N-acetylgluco 20.9 1.8E+02 0.0039 26.2 4.6 37 46-84 84-123 (383)
234 PF13135 DUF3947: Protein of u 20.6 97 0.0021 20.8 2.1 23 212-234 9-31 (76)
235 PLN02470 acetolactate synthase 20.5 95 0.0021 29.7 3.1 28 213-240 76-109 (585)
236 CHL00067 rps2 ribosomal protei 20.5 1.1E+02 0.0024 25.3 3.1 36 55-90 160-197 (230)
237 PRK05636 replicative DNA helic 20.5 1.2E+02 0.0026 28.5 3.6 41 42-84 363-422 (505)
238 TIGR00639 PurN phosphoribosylg 20.3 2.7E+02 0.0059 22.2 5.2 43 42-84 14-57 (190)
239 TIGR01860 VNFD nitrogenase van 20.3 1.2E+02 0.0026 28.1 3.5 23 56-81 397-419 (461)
240 cd01971 Nitrogenase_VnfN_like 20.2 1.7E+02 0.0037 26.7 4.5 26 56-84 371-396 (427)
241 PRK06882 acetolactate synthase 20.2 89 0.0019 29.7 2.8 28 213-240 67-100 (574)
242 PRK08527 acetolactate synthase 20.1 91 0.002 29.6 2.8 28 213-240 66-99 (563)
243 PRK00726 murG undecaprenyldiph 20.1 1.9E+02 0.0041 25.2 4.7 35 47-83 84-120 (357)
No 1
>PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=100.00 E-value=1.3e-50 Score=365.37 Aligned_cols=263 Identities=28% Similarity=0.423 Sum_probs=202.1
Q ss_pred CceEEecCCCCCCC-CCCCCCCcHHHHHHHHHHchHHHHHHHHHHHHcCCCCccEEEeCCCchhHHHHHHHcCCCeEeEe
Q 035856 6 NIRVYDVEDGVPMK-YASTESNPLEAVELFVKATPENFKKGLDAAVSKTGRKISCFLTDAFLTFSGEMARDMHIPWFPVF 84 (278)
Q Consensus 6 ~i~~~~i~~glp~~-~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~d~vI~D~~~~~~~~vA~~lgIP~v~~~ 84 (278)
+|+|+.+|||+|++ .+. ..+..++..+.+.+...+++.++++..+.+++++|||+|++++|+.++|+++|||++.|+
T Consensus 56 ~i~~~~ip~glp~~~~~~--~~~~~~~~~~~~~~~~~~~~~L~~l~~~~~~p~~cVI~D~f~~Wa~dvA~~lgIP~v~F~ 133 (451)
T PLN02410 56 DFQFVTIPESLPESDFKN--LGPIEFLHKLNKECQVSFKDCLGQLVLQQGNEIACVVYDEFMYFAEAAAKEFKLPNVIFS 133 (451)
T ss_pred CeEEEeCCCCCCcccccc--cCHHHHHHHHHHHhHHHHHHHHHHHHhccCCCcEEEEECCcchHHHHHHHHcCCCEEEEE
Confidence 69999999999985 332 233445555555566667777776554334578999999999999999999999999999
Q ss_pred CChhhhhhhhhcchhhhh--------h-------hccC-------Ccch-------HHHHHHHHHhcccCCCcEEEecch
Q 035856 85 VAMPYNGSAHIHTDLIHQ--------F-------FINN-------CEES-------LFSSMLSKLGGVLPQASAAVMNFY 135 (278)
Q Consensus 85 ~~~~~~~~~~~~~~~l~~--------~-------~~~~-------~~~~-------~~~~~~~~~~~~~~~~~~~l~nt~ 135 (278)
+++++....+++...+.. . ..|+ +.+. .+...+.. .....+++++++|||
T Consensus 134 t~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iPg~~~~~~~dlp~~~~~~~~~~~~~~~~-~~~~~~~~~vlvNTf 212 (451)
T PLN02410 134 TTSATAFVCRSVFDKLYANNVLAPLKEPKGQQNELVPEFHPLRCKDFPVSHWASLESIMELYRN-TVDKRTASSVIINTA 212 (451)
T ss_pred ccCHHHHHHHHHHHHHHhccCCCCccccccCccccCCCCCCCChHHCcchhcCCcHHHHHHHHH-HhhcccCCEEEEeCh
Confidence 999988766654322211 0 1222 1111 11111111 123567999999999
Q ss_pred HhhhccchhhHHHhhcC-CeEEEecCCCCCCCCCCC--CCCCCcchhhhHhhhcCCCCC---------------------
Q 035856 136 QELYCSSQLTNDLNSKV-PSLLKVGFLTQPLPPPPL--PPSDSDETGYLQWLDRQKPKS--------------------- 191 (278)
Q Consensus 136 ~~le~~~~~~~~~~~~~-~~v~~VG~~~~pl~~~~~--~~~~~~~~~~~~wld~~~~~s--------------------- 191 (278)
++|| +++++++++.. +++++|| |++.... ....+++..|++|||+++++|
T Consensus 213 ~eLE--~~~~~~l~~~~~~~v~~vG----pl~~~~~~~~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~~~~~q~~ela 286 (451)
T PLN02410 213 SCLE--SSSLSRLQQQLQIPVYPIG----PLHLVASAPTSLLEENKSCIEWLNKQKKNSVIFVSLGSLALMEINEVMETA 286 (451)
T ss_pred HHhh--HHHHHHHHhccCCCEEEec----ccccccCCCccccccchHHHHHHHhCCCCcEEEEEccccccCCHHHHHHHH
Confidence 9999 99999998866 6899999 9975322 111233457999999998876
Q ss_pred --------------C--------------------CCCCeEEecCcchhhhcccccccEEEeeCCchhHHHHHHhCccee
Q 035856 192 --------------R--------------------TSGRGKIVLQAPQTQVLGHFSIGVFVIHSGANSVCESIANGVLMI 237 (278)
Q Consensus 192 --------------~--------------------~~~~~~v~~w~pq~~iL~~~~v~~fitHgG~~s~~eal~~GvP~l 237 (278)
+ +++||++++|+||.+||+|++||+|||||||||++||+++|||||
T Consensus 287 ~gLe~s~~~FlWv~r~~~~~~~~~~~~lp~~f~er~~~~g~v~~w~PQ~~iL~h~~v~~fvtH~G~nS~~Ea~~~GvP~l 366 (451)
T PLN02410 287 SGLDSSNQQFLWVIRPGSVRGSEWIESLPKEFSKIISGRGYIVKWAPQKEVLSHPAVGGFWSHCGWNSTLESIGEGVPMI 366 (451)
T ss_pred HHHHhcCCCeEEEEccCcccccchhhcCChhHHHhccCCeEEEccCCHHHHhCCCccCeeeecCchhHHHHHHHcCCCEE
Confidence 2 236788999999999999999999999999999999999999999
Q ss_pred eccccCChhHHHHHHHHHhcceEEecCCCcCHHHHHhhhhC
Q 035856 238 CRPFYGDHRMNARMVEEVWGIGVKVEGILLTKSGVLQSLDL 278 (278)
Q Consensus 238 ~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~~~~l~~~i~~ 278 (278)
+||+++||+.||+++++.||+|++++ +.+++++|+++|++
T Consensus 367 ~~P~~~DQ~~na~~~~~~~~~G~~~~-~~~~~~~v~~av~~ 406 (451)
T PLN02410 367 CKPFSSDQKVNARYLECVWKIGIQVE-GDLDRGAVERAVKR 406 (451)
T ss_pred eccccccCHHHHHHHHHHhCeeEEeC-CcccHHHHHHHHHH
Confidence 99999999999999999999999997 57899999999863
No 2
>PLN02173 UDP-glucosyl transferase family protein
Probab=100.00 E-value=7.2e-50 Score=359.24 Aligned_cols=264 Identities=22% Similarity=0.366 Sum_probs=196.6
Q ss_pred CCceEEecCCCCCCC-CCCCCCCcHHHHHHHHHHchHHHHHHHHHHHHcCCCCccEEEeCCCchhHHHHHHHcCCCeEeE
Q 035856 5 DNIRVYDVEDGVPMK-YASTESNPLEAVELFVKATPENFKKGLDAAVSKTGRKISCFLTDAFLTFSGEMARDMHIPWFPV 83 (278)
Q Consensus 5 ~~i~~~~i~~glp~~-~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~d~vI~D~~~~~~~~vA~~lgIP~v~~ 83 (278)
++|+|+.+|||+|++ .+++ +++..++..+.+.+.+.+++.++++..+ +++++|||+|.+++|+.++|+++|||++.|
T Consensus 54 ~~i~~~~ipdglp~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~Pv~cvV~D~f~~Wa~dVA~elgIP~v~F 131 (449)
T PLN02173 54 SPISIATISDGYDQGGFSSA-GSVPEYLQNFKTFGSKTVADIIRKHQST-DNPITCIVYDSFMPWALDLAREFGLAAAPF 131 (449)
T ss_pred CCEEEEEcCCCCCCcccccc-cCHHHHHHHHHHhhhHHHHHHHHHhhcc-CCCceEEEECCcchhHHHHHHHhCCCEEEE
Confidence 369999999999984 4543 3445555555444455555555554221 234599999999999999999999999999
Q ss_pred eCChhhhhhhhhcchhhhh---hh-ccC-------Ccc---------hHHHHHHHHHhcccCCCcEEEecchHhhhccch
Q 035856 84 FVAMPYNGSAHIHTDLIHQ---FF-INN-------CEE---------SLFSSMLSKLGGVLPQASAAVMNFYQELYCSSQ 143 (278)
Q Consensus 84 ~~~~~~~~~~~~~~~~l~~---~~-~~~-------~~~---------~~~~~~~~~~~~~~~~~~~~l~nt~~~le~~~~ 143 (278)
++++++....+++. .+.. .+ +|+ +.+ ..+...+.+......+++++++|||++|| ++
T Consensus 132 ~~~~a~~~~~~~~~-~~~~~~~~~~~pg~p~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE--~~ 208 (449)
T PLN02173 132 FTQSCAVNYINYLS-YINNGSLTLPIKDLPLLELQDLPTFVTPTGSHLAYFEMVLQQFTNFDKADFVLVNSFHDLD--LH 208 (449)
T ss_pred echHHHHHHHHHhH-HhccCCccCCCCCCCCCChhhCChhhcCCCCchHHHHHHHHHHhhhccCCEEEEeCHHHhh--HH
Confidence 99988776554431 1100 00 111 111 11223333444567789999999999999 99
Q ss_pred hhHHHhhcCCeEEEecCCCCCCCCCC-------C-CC---C--C-CcchhhhHhhhcCCCCC------------------
Q 035856 144 LTNDLNSKVPSLLKVGFLTQPLPPPP-------L-PP---S--D-SDETGYLQWLDRQKPKS------------------ 191 (278)
Q Consensus 144 ~~~~~~~~~~~v~~VG~~~~pl~~~~-------~-~~---~--~-~~~~~~~~wld~~~~~s------------------ 191 (278)
+++++++. +++|+|| |+++.. . .. . . .+++.|+.|||+++++|
T Consensus 209 ~~~~~~~~-~~v~~VG----Pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~WLd~~~~~svvyvsfGS~~~~~~~~~~ 283 (449)
T PLN02173 209 ENELLSKV-CPVLTIG----PTVPSMYLDQQIKSDNDYDLNLFDLKEAALCTDWLDKRPQGSVVYIAFGSMAKLSSEQME 283 (449)
T ss_pred HHHHHHhc-CCeeEEc----ccCchhhccccccccccccccccccccchHHHHHHhcCCCCceEEEEecccccCCHHHHH
Confidence 99988764 5799999 997421 0 00 0 0 12346999999999875
Q ss_pred ---------------C--------------C-CCCeEEecCcchhhhcccccccEEEeeCCchhHHHHHHhCcceeeccc
Q 035856 192 ---------------R--------------T-SGRGKIVLQAPQTQVLGHFSIGVFVIHSGANSVCESIANGVLMICRPF 241 (278)
Q Consensus 192 ---------------~--------------~-~~~~~v~~w~pq~~iL~~~~v~~fitHgG~~s~~eal~~GvP~l~~P~ 241 (278)
+ . ++|+++.+|+||.+||+|++||+|||||||||++||+++|||||+||+
T Consensus 284 ela~gLs~~~flWvvr~~~~~~lp~~~~~~~~~~~~~i~~W~PQ~~iL~H~~v~~FvtHcGwnS~~Eai~~GVP~l~~P~ 363 (449)
T PLN02173 284 EIASAISNFSYLWVVRASEESKLPPGFLETVDKDKSLVLKWSPQLQVLSNKAIGCFMTHCGWNSTMEGLSLGVPMVAMPQ 363 (449)
T ss_pred HHHHHhcCCCEEEEEeccchhcccchHHHhhcCCceEEeCCCCHHHHhCCCccceEEecCccchHHHHHHcCCCEEecCc
Confidence 1 1 356788899999999999999999999999999999999999999999
Q ss_pred cCChhHHHHHHHHHhcceEEecC----CCcCHHHHHhhhhC
Q 035856 242 YGDHRMNARMVEEVWGIGVKVEG----ILLTKSGVLQSLDL 278 (278)
Q Consensus 242 ~~DQ~~na~~~~~~~g~G~~l~~----~~~~~~~l~~~i~~ 278 (278)
++||+.||+++++.||+|+++.. +.+++++|+++|++
T Consensus 364 ~~DQ~~Na~~v~~~~g~Gv~v~~~~~~~~~~~e~v~~av~~ 404 (449)
T PLN02173 364 WTDQPMNAKYIQDVWKVGVRVKAEKESGIAKREEIEFSIKE 404 (449)
T ss_pred hhcchHHHHHHHHHhCceEEEeecccCCcccHHHHHHHHHH
Confidence 99999999999999999999953 24799999999874
No 3
>PLN02152 indole-3-acetate beta-glucosyltransferase
Probab=100.00 E-value=7.6e-49 Score=353.19 Aligned_cols=264 Identities=21% Similarity=0.363 Sum_probs=199.3
Q ss_pred CceEEecCCCCCCCCCCCCCCcHHHHHHHHHHchHHHHHHHHHHHHcCCCCccEEEeCCCchhHHHHHHHcCCCeEeEeC
Q 035856 6 NIRVYDVEDGVPMKYASTESNPLEAVELFVKATPENFKKGLDAAVSKTGRKISCFLTDAFLTFSGEMARDMHIPWFPVFV 85 (278)
Q Consensus 6 ~i~~~~i~~glp~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~d~vI~D~~~~~~~~vA~~lgIP~v~~~~ 85 (278)
+|+|+.++||+|++.+....+....+..+.+.+.+.+++.++++.+. +++++|||+|.+++|+.++|+++|||++.|++
T Consensus 57 ~i~~~~i~dglp~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~-~~pv~ciV~D~~~~wa~dvA~~lgIP~~~f~t 135 (455)
T PLN02152 57 NLSFLTFSDGFDDGVISNTDDVQNRLVNFERNGDKALSDFIEANLNG-DSPVTCLIYTILPNWAPKVARRFHLPSVLLWI 135 (455)
T ss_pred CEEEEEcCCCCCCccccccccHHHHHHHHHHhccHHHHHHHHHhhcc-CCCceEEEECCccHhHHHHHHHhCCCEEEEEC
Confidence 69999999999988654324455556666666666777777765422 24679999999999999999999999999999
Q ss_pred Chhhhhhhhhcchhhhhh--hccC-------Ccch---------HHHHHHHHHhcccC--CCcEEEecchHhhhccchhh
Q 035856 86 AMPYNGSAHIHTDLIHQF--FINN-------CEES---------LFSSMLSKLGGVLP--QASAAVMNFYQELYCSSQLT 145 (278)
Q Consensus 86 ~~~~~~~~~~~~~~l~~~--~~~~-------~~~~---------~~~~~~~~~~~~~~--~~~~~l~nt~~~le~~~~~~ 145 (278)
++++....+++....... .+|+ +.++ .+.....+...... .++++++|||++|| ++++
T Consensus 136 ~~a~~~~~~~~~~~~~~~~~~iPglp~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE--~~~~ 213 (455)
T PLN02152 136 QPAFVFDIYYNYSTGNNSVFEFPNLPSLEIRDLPSFLSPSNTNKAAQAVYQELMEFLKEESNPKILVNTFDSLE--PEFL 213 (455)
T ss_pred ccHHHHHHHHHhhccCCCeeecCCCCCCchHHCchhhcCCCCchhHHHHHHHHHHHhhhccCCEEEEeChHHhh--HHHH
Confidence 999988776554211100 0222 1111 11222333333332 35799999999999 9999
Q ss_pred HHHhhcCCeEEEecCCCCCCCCCCC---C--CC----CCcchhhhHhhhcCCCCC-------------------------
Q 035856 146 NDLNSKVPSLLKVGFLTQPLPPPPL---P--PS----DSDETGYLQWLDRQKPKS------------------------- 191 (278)
Q Consensus 146 ~~~~~~~~~v~~VG~~~~pl~~~~~---~--~~----~~~~~~~~~wld~~~~~s------------------------- 191 (278)
++++. .++|+|| |+.+... . .. .+++.+|++|||+++++|
T Consensus 214 ~~l~~--~~v~~VG----PL~~~~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~l~~~q~~ela~gL~ 287 (455)
T PLN02152 214 TAIPN--IEMVAVG----PLLPAEIFTGSESGKDLSVRDQSSSYTLWLDSKTESSVIYVSFGTMVELSKKQIEELARALI 287 (455)
T ss_pred Hhhhc--CCEEEEc----ccCccccccccccCccccccccchHHHHHhhCCCCCceEEEEecccccCCHHHHHHHHHHHH
Confidence 88865 3799999 9975321 0 00 122457999999998765
Q ss_pred ----------C--------------------------CCCCeEEecCcchhhhcccccccEEEeeCCchhHHHHHHhCcc
Q 035856 192 ----------R--------------------------TSGRGKIVLQAPQTQVLGHFSIGVFVIHSGANSVCESIANGVL 235 (278)
Q Consensus 192 ----------~--------------------------~~~~~~v~~w~pq~~iL~~~~v~~fitHgG~~s~~eal~~GvP 235 (278)
+ .++|+++++|+||.+||+|++||+|||||||||++||+++|||
T Consensus 288 ~s~~~flWv~r~~~~~~~~~~~~~~~~~~~~~~f~e~~~~~g~v~~W~PQ~~iL~h~~vg~fvtH~G~nS~~Ea~~~GvP 367 (455)
T PLN02152 288 EGKRPFLWVITDKLNREAKIEGEEETEIEKIAGFRHELEEVGMIVSWCSQIEVLRHRAVGCFVTHCGWSSSLESLVLGVP 367 (455)
T ss_pred HcCCCeEEEEecCcccccccccccccccccchhHHHhccCCeEEEeeCCHHHHhCCcccceEEeeCCcccHHHHHHcCCC
Confidence 2 1256788899999999999999999999999999999999999
Q ss_pred eeeccccCChhHHHHHHHHHhcceEEec---CCCcCHHHHHhhhhC
Q 035856 236 MICRPFYGDHRMNARMVEEVWGIGVKVE---GILLTKSGVLQSLDL 278 (278)
Q Consensus 236 ~l~~P~~~DQ~~na~~~~~~~g~G~~l~---~~~~~~~~l~~~i~~ 278 (278)
||+||+++||+.||+++++.||+|+.+. .+.+++++|+++|++
T Consensus 368 ~l~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~~~~~~e~l~~av~~ 413 (455)
T PLN02152 368 VVAFPMWSDQPANAKLLEEIWKTGVRVRENSEGLVERGEIRRCLEA 413 (455)
T ss_pred EEeccccccchHHHHHHHHHhCceEEeecCcCCcCcHHHHHHHHHH
Confidence 9999999999999999999999999984 235799999999874
No 4
>PLN00414 glycosyltransferase family protein
Probab=100.00 E-value=7.9e-49 Score=353.31 Aligned_cols=265 Identities=22% Similarity=0.298 Sum_probs=199.4
Q ss_pred CCCceEEecC----CCCCCCCCCCCCCcHHHHHHHHHHchHHHHHHHHHHHHcCCCCccEEEeCCCchhHHHHHHHcCCC
Q 035856 4 PDNIRVYDVE----DGVPMKYASTESNPLEAVELFVKATPENFKKGLDAAVSKTGRKISCFLTDAFLTFSGEMARDMHIP 79 (278)
Q Consensus 4 ~~~i~~~~i~----~glp~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~d~vI~D~~~~~~~~vA~~lgIP 79 (278)
+++|+|+.++ ||+|++.+++.+.+......+ ....+.+.+.+++++++. ++||||+|+ ++|+.++|+++|||
T Consensus 54 ~~~i~~~~i~lP~~dGLP~g~e~~~~l~~~~~~~~-~~a~~~l~~~l~~~L~~~--~p~cVV~D~-~~wa~~vA~~lgIP 129 (446)
T PLN00414 54 PDSIVFEPLTLPPVDGLPFGAETASDLPNSTKKPI-FDAMDLLRDQIEAKVRAL--KPDLIFFDF-VHWVPEMAKEFGIK 129 (446)
T ss_pred CCceEEEEecCCCcCCCCCcccccccchhhHHHHH-HHHHHHHHHHHHHHHhcC--CCeEEEECC-chhHHHHHHHhCCC
Confidence 3468996654 899988665432222222233 334456888888888754 789999995 89999999999999
Q ss_pred eEeEeCChhhhhhhhhcchhhhhhhccC-----------Cc--chHH---HHHHHHHhcccCCCcEEEecchHhhhccch
Q 035856 80 WFPVFVAMPYNGSAHIHTDLIHQFFINN-----------CE--ESLF---SSMLSKLGGVLPQASAAVMNFYQELYCSSQ 143 (278)
Q Consensus 80 ~v~~~~~~~~~~~~~~~~~~l~~~~~~~-----------~~--~~~~---~~~~~~~~~~~~~~~~~l~nt~~~le~~~~ 143 (278)
++.|++++++....+++...-.....|+ +. ...+ .....+..+...+++++++|||++|| +.
T Consensus 130 ~~~F~~~~a~~~~~~~~~~~~~~~~~pg~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE--~~ 207 (446)
T PLN00414 130 SVNYQIISAACVAMVLAPRAELGFPPPDYPLSKVALRGHDANVCSLFANSHELFGLITKGLKNCDVVSIRTCVELE--GN 207 (446)
T ss_pred EEEEecHHHHHHHHHhCcHhhcCCCCCCCCCCcCcCchhhcccchhhcccHHHHHHHHHhhccCCEEEEechHHHH--HH
Confidence 9999999998877765421100000111 00 0101 12223333556789999999999999 99
Q ss_pred hhHHHhhcC-CeEEEecCCCCCCCCCCCCC-CCCcchhhhHhhhcCCCCC------------------------------
Q 035856 144 LTNDLNSKV-PSLLKVGFLTQPLPPPPLPP-SDSDETGYLQWLDRQKPKS------------------------------ 191 (278)
Q Consensus 144 ~~~~~~~~~-~~v~~VG~~~~pl~~~~~~~-~~~~~~~~~~wld~~~~~s------------------------------ 191 (278)
+++++++.. +++|+|| |+.+..... ...+++.|++|||+|+++|
T Consensus 208 ~~~~~~~~~~~~v~~VG----Pl~~~~~~~~~~~~~~~~~~WLD~q~~~sVvyvsfGS~~~~~~~q~~e~a~gL~~s~~~ 283 (446)
T PLN00414 208 LCDFIERQCQRKVLLTG----PMLPEPQNKSGKPLEDRWNHWLNGFEPGSVVFCAFGTQFFFEKDQFQEFCLGMELTGLP 283 (446)
T ss_pred HHHHHHHhcCCCeEEEc----ccCCCcccccCcccHHHHHHHHhcCCCCceEEEeecccccCCHHHHHHHHHHHHHcCCC
Confidence 999998765 5799999 997533211 1122457999999999987
Q ss_pred ------------------------CCCCCeEEe-cCcchhhhcccccccEEEeeCCchhHHHHHHhCcceeeccccCChh
Q 035856 192 ------------------------RTSGRGKIV-LQAPQTQVLGHFSIGVFVIHSGANSVCESIANGVLMICRPFYGDHR 246 (278)
Q Consensus 192 ------------------------~~~~~~~v~-~w~pq~~iL~~~~v~~fitHgG~~s~~eal~~GvP~l~~P~~~DQ~ 246 (278)
+++++|+++ +|+||.+||+|++|++||||||||||+||+++|||||+||+++||+
T Consensus 284 Flwvvr~~~~~~~~~~~lp~~f~~r~~~~g~vv~~w~PQ~~vL~h~~v~~fvtH~G~nS~~Ea~~~GvP~l~~P~~~dQ~ 363 (446)
T PLN00414 284 FLIAVMPPKGSSTVQEALPEGFEERVKGRGIVWEGWVEQPLILSHPSVGCFVNHCGFGSMWESLVSDCQIVFIPQLADQV 363 (446)
T ss_pred eEEEEecCCCcccchhhCChhHHHHhcCCCeEEeccCCHHHHhcCCccceEEecCchhHHHHHHHcCCCEEecCcccchH
Confidence 245677777 8999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcceEEecC---CCcCHHHHHhhhhC
Q 035856 247 MNARMVEEVWGIGVKVEG---ILLTKSGVLQSLDL 278 (278)
Q Consensus 247 ~na~~~~~~~g~G~~l~~---~~~~~~~l~~~i~~ 278 (278)
.||+++++.||+|++++. +.+++++|+++|++
T Consensus 364 ~na~~~~~~~g~g~~~~~~~~~~~~~~~i~~~v~~ 398 (446)
T PLN00414 364 LITRLLTEELEVSVKVQREDSGWFSKESLRDTVKS 398 (446)
T ss_pred HHHHHHHHHhCeEEEeccccCCccCHHHHHHHHHH
Confidence 999999877899999964 25899999999874
No 5
>PLN02764 glycosyltransferase family protein
Probab=100.00 E-value=1.1e-48 Score=350.75 Aligned_cols=261 Identities=20% Similarity=0.325 Sum_probs=198.8
Q ss_pred ceEEecC--CCCCCCCCCCCCCcHHHHHHHHHHchHHHHHHHHHHHHcCCCCccEEEeCCCchhHHHHHHHcCCCeEeEe
Q 035856 7 IRVYDVE--DGVPMKYASTESNPLEAVELFVKATPENFKKGLDAAVSKTGRKISCFLTDAFLTFSGEMARDMHIPWFPVF 84 (278)
Q Consensus 7 i~~~~i~--~glp~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~d~vI~D~~~~~~~~vA~~lgIP~v~~~ 84 (278)
++++++| ||+|++.+++.+.+......+..++ +.+++.+++++++. +++|||+|+ ++|+.++|+++|||++.|+
T Consensus 60 v~~~~~p~~~glp~g~e~~~~~~~~~~~~~~~a~-~~~~~~~~~~l~~~--~~~~iV~D~-~~w~~~vA~~~gIP~~~f~ 135 (453)
T PLN02764 60 FRSVTVPHVDGLPVGTETVSEIPVTSADLLMSAM-DLTRDQVEVVVRAV--EPDLIFFDF-AHWIPEVARDFGLKTVKYV 135 (453)
T ss_pred EEEEECCCcCCCCCcccccccCChhHHHHHHHHH-HHhHHHHHHHHHhC--CCCEEEECC-chhHHHHHHHhCCCEEEEE
Confidence 7788887 8999987765433433444554443 46788888888774 789999995 9999999999999999999
Q ss_pred CChhhhhhhhhcch-h-------hhh---hhccCCcc-----------hHHHHHHHHHhcccCCCcEEEecchHhhhccc
Q 035856 85 VAMPYNGSAHIHTD-L-------IHQ---FFINNCEE-----------SLFSSMLSKLGGVLPQASAAVMNFYQELYCSS 142 (278)
Q Consensus 85 ~~~~~~~~~~~~~~-~-------l~~---~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~l~nt~~~le~~~ 142 (278)
+++++....+++.. . +.. .+...+.. ..+.....++...+.+++++++|||+||| +
T Consensus 136 ~~~a~~~~~~~~~~~~~~~~~pglp~~~v~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~vlvNTf~eLE--~ 213 (453)
T PLN02764 136 VVSASTIASMLVPGGELGVPPPGYPSSKVLLRKQDAYTMKNLEPTNTIDVGPNLLERVTTSLMNSDVIAIRTAREIE--G 213 (453)
T ss_pred cHHHHHHHHHhcccccCCCCCCCCCCCcccCcHhhCcchhhcCCCccchhHHHHHHHHHHhhccCCEEEEeccHHhh--H
Confidence 99998777664311 0 100 00000000 01222333333556789999999999999 9
Q ss_pred hhhHHHhhcC-CeEEEecCCCCCCCCCCCCCCCCcchhhhHhhhcCCCCC------------------------------
Q 035856 143 QLTNDLNSKV-PSLLKVGFLTQPLPPPPLPPSDSDETGYLQWLDRQKPKS------------------------------ 191 (278)
Q Consensus 143 ~~~~~~~~~~-~~v~~VG~~~~pl~~~~~~~~~~~~~~~~~wld~~~~~s------------------------------ 191 (278)
++++++++.. +++++|| |+....... ...+.+|++|||+|+++|
T Consensus 214 ~~~~~~~~~~~~~v~~VG----PL~~~~~~~-~~~~~~cl~WLD~q~~~sVvyvsfGS~~~~~~~q~~ela~gL~~s~~p 288 (453)
T PLN02764 214 NFCDYIEKHCRKKVLLTG----PVFPEPDKT-RELEERWVKWLSGYEPDSVVFCALGSQVILEKDQFQELCLGMELTGSP 288 (453)
T ss_pred HHHHHHHhhcCCcEEEec----cCccCcccc-ccchhHHHHHHhCCCCCceEEEeecccccCCHHHHHHHHHHHHhCCCC
Confidence 9999997754 6899999 997532111 122467999999999886
Q ss_pred -----C-------------------CCCCeEEe-cCcchhhhcccccccEEEeeCCchhHHHHHHhCcceeeccccCChh
Q 035856 192 -----R-------------------TSGRGKIV-LQAPQTQVLGHFSIGVFVIHSGANSVCESIANGVLMICRPFYGDHR 246 (278)
Q Consensus 192 -----~-------------------~~~~~~v~-~w~pq~~iL~~~~v~~fitHgG~~s~~eal~~GvP~l~~P~~~DQ~ 246 (278)
+ ++++|+++ +|+||.+||+|+++++||||||||||+||+++|||||+||+++||+
T Consensus 289 flwv~r~~~~~~~~~~~lp~~f~~r~~grG~v~~~W~PQ~~vL~h~~v~~FvtH~G~nS~~Eal~~GVP~l~~P~~~DQ~ 368 (453)
T PLN02764 289 FLVAVKPPRGSSTIQEALPEGFEERVKGRGVVWGGWVQQPLILSHPSVGCFVSHCGFGSMWESLLSDCQIVLVPQLGDQV 368 (453)
T ss_pred eEEEEeCCCCCcchhhhCCcchHhhhccCCcEEeCCCCHHHHhcCcccCeEEecCCchHHHHHHHcCCCEEeCCcccchH
Confidence 1 23567666 8999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcceEEecC---CCcCHHHHHhhhhC
Q 035856 247 MNARMVEEVWGIGVKVEG---ILLTKSGVLQSLDL 278 (278)
Q Consensus 247 ~na~~~~~~~g~G~~l~~---~~~~~~~l~~~i~~ 278 (278)
.||+++++.||+|+.+.. +.+++++|+++|++
T Consensus 369 ~na~~l~~~~g~gv~~~~~~~~~~~~e~i~~av~~ 403 (453)
T PLN02764 369 LNTRLLSDELKVSVEVAREETGWFSKESLRDAINS 403 (453)
T ss_pred HHHHHHHHHhceEEEeccccCCccCHHHHHHHHHH
Confidence 999999887899999853 35899999999874
No 6
>PLN02208 glycosyltransferase family protein
Probab=100.00 E-value=1.6e-48 Score=350.91 Aligned_cols=263 Identities=20% Similarity=0.315 Sum_probs=194.8
Q ss_pred CCCceEEec--C--CCCCCCCCCCCCCcHHHHHHHHHHchHHHHHHHHHHHHcCCCCccEEEeCCCchhHHHHHHHcCCC
Q 035856 4 PDNIRVYDV--E--DGVPMKYASTESNPLEAVELFVKATPENFKKGLDAAVSKTGRKISCFLTDAFLTFSGEMARDMHIP 79 (278)
Q Consensus 4 ~~~i~~~~i--~--~glp~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~d~vI~D~~~~~~~~vA~~lgIP 79 (278)
+++++|..+ | ||+|++.++++ +....+..+.....+.+.+.+++++++. ++||||+| ++.|+.++|+++|||
T Consensus 54 ~~~i~~~~l~~p~~dgLp~g~~~~~-~l~~~l~~~~~~~~~~~~~~l~~~L~~~--~~~cVV~D-~~~wa~~vA~e~giP 129 (442)
T PLN02208 54 PDSIVFHPLTIPPVNGLPAGAETTS-DIPISMDNLLSEALDLTRDQVEAAVRAL--RPDLIFFD-FAQWIPEMAKEHMIK 129 (442)
T ss_pred CCceEEEEeCCCCccCCCCCccccc-chhHHHHHHHHHHHHHHHHHHHHHHhhC--CCeEEEEC-CcHhHHHHHHHhCCC
Confidence 446677654 4 78998876542 2222333333344566888888888765 78999999 589999999999999
Q ss_pred eEeEeCChhhhhhhhhcchh-hhhhhccC-----------Ccc------hHHHHHHHHHhcccCCCcEEEecchHhhhcc
Q 035856 80 WFPVFVAMPYNGSAHIHTDL-IHQFFINN-----------CEE------SLFSSMLSKLGGVLPQASAAVMNFYQELYCS 141 (278)
Q Consensus 80 ~v~~~~~~~~~~~~~~~~~~-l~~~~~~~-----------~~~------~~~~~~~~~~~~~~~~~~~~l~nt~~~le~~ 141 (278)
++.|++++++... +++... ......|+ +.+ ..+........+...+++++++|||+|||
T Consensus 130 ~~~f~~~~a~~~~-~~~~~~~~~~~~~pglp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~Ntf~eLE-- 206 (442)
T PLN02208 130 SVSYIIVSATTIA-HTHVPGGKLGVPPPGYPSSKVLFRENDAHALATLSIFYKRLYHQITTGLKSCDVIALRTCKEIE-- 206 (442)
T ss_pred EEEEEhhhHHHHH-HHccCccccCCCCCCCCCcccccCHHHcCcccccchHHHHHHHHHHhhhccCCEEEEECHHHHH--
Confidence 9999999988654 443311 00000111 111 11222222333456789999999999999
Q ss_pred chhhHHHhhcC-CeEEEecCCCCCCCCCCCCCCCCcchhhhHhhhcCCCCC-----------------------------
Q 035856 142 SQLTNDLNSKV-PSLLKVGFLTQPLPPPPLPPSDSDETGYLQWLDRQKPKS----------------------------- 191 (278)
Q Consensus 142 ~~~~~~~~~~~-~~v~~VG~~~~pl~~~~~~~~~~~~~~~~~wld~~~~~s----------------------------- 191 (278)
++++++++..+ |++++|| |++...... ...+.+|++|||+++++|
T Consensus 207 ~~~~~~~~~~~~~~v~~vG----pl~~~~~~~-~~~~~~~~~wLd~~~~~sVvyvSfGS~~~l~~~q~~e~~~~l~~s~~ 281 (442)
T PLN02208 207 GKFCDYISRQYHKKVLLTG----PMFPEPDTS-KPLEEQWSHFLSGFPPKSVVFCSLGSQIILEKDQFQELCLGMELTGL 281 (442)
T ss_pred HHHHHHHHhhcCCCEEEEe----ecccCcCCC-CCCHHHHHHHHhcCCCCcEEEEeccccccCCHHHHHHHHHHHHhCCC
Confidence 99999987765 7899999 998643211 123467999999998765
Q ss_pred ------CC-----------C--------CCeEEe-cCcchhhhcccccccEEEeeCCchhHHHHHHhCcceeeccccCCh
Q 035856 192 ------RT-----------S--------GRGKIV-LQAPQTQVLGHFSIGVFVIHSGANSVCESIANGVLMICRPFYGDH 245 (278)
Q Consensus 192 ------~~-----------~--------~~~~v~-~w~pq~~iL~~~~v~~fitHgG~~s~~eal~~GvP~l~~P~~~DQ 245 (278)
+. + ++++++ +|+||.+||+|++||+||||||||||+||+++|||||+||+++||
T Consensus 282 pf~wv~r~~~~~~~~~~~lp~~f~~r~~~~g~~v~~W~PQ~~iL~H~~v~~FvtHcG~nS~~Eai~~GVP~l~~P~~~DQ 361 (442)
T PLN02208 282 PFLIAVKPPRGSSTVQEGLPEGFEERVKGRGVVWGGWVQQPLILDHPSIGCFVNHCGPGTIWESLVSDCQMVLIPFLSDQ 361 (442)
T ss_pred cEEEEEeCCCcccchhhhCCHHHHHHHhcCCcEeeccCCHHHHhcCCccCeEEccCCchHHHHHHHcCCCEEecCcchhh
Confidence 21 1 145555 999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHhcceEEecCC---CcCHHHHHhhhhC
Q 035856 246 RMNARMVEEVWGIGVKVEGI---LLTKSGVLQSLDL 278 (278)
Q Consensus 246 ~~na~~~~~~~g~G~~l~~~---~~~~~~l~~~i~~ 278 (278)
+.||+++++.||+|++++.+ .+++++|+++|++
T Consensus 362 ~~na~~~~~~~g~gv~~~~~~~~~~~~~~l~~ai~~ 397 (442)
T PLN02208 362 VLFTRLMTEEFEVSVEVSREKTGWFSKESLSNAIKS 397 (442)
T ss_pred HHHHHHHHHHhceeEEeccccCCcCcHHHHHHHHHH
Confidence 99999999878999999653 3999999999874
No 7
>PLN02555 limonoid glucosyltransferase
Probab=100.00 E-value=2.3e-48 Score=352.23 Aligned_cols=263 Identities=24% Similarity=0.344 Sum_probs=198.0
Q ss_pred ceEEecCCCCCCCCCCCCCCcHHHHHHHHHHchHHHHHHHHHHHHcCCCCccEEEeCCCchhHHHHHHHcCCCeEeEeCC
Q 035856 7 IRVYDVEDGVPMKYASTESNPLEAVELFVKATPENFKKGLDAAVSKTGRKISCFLTDAFLTFSGEMARDMHIPWFPVFVA 86 (278)
Q Consensus 7 i~~~~i~~glp~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~d~vI~D~~~~~~~~vA~~lgIP~v~~~~~ 86 (278)
++|..+|||+|++.+.+ .+...++..+.+...+.+++.++++.+ .+++++|||+|.+++|+.++|+++|||+++|+++
T Consensus 69 i~~~~~pdglp~~~~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~pv~ciV~D~~~~wa~~vA~~~gIP~~~F~t~ 146 (480)
T PLN02555 69 IRFEFFEDGWAEDDPRR-QDLDLYLPQLELVGKREIPNLVKRYAE-QGRPVSCLINNPFIPWVCDVAEELGIPSAVLWVQ 146 (480)
T ss_pred EEEeeCCCCCCCCcccc-cCHHHHHHHHHHhhhHHHHHHHHHHhc-cCCCceEEEECCcchHHHHHHHHcCCCeEEeecc
Confidence 78888999999887643 334444555544445555555555422 2345699999999999999999999999999999
Q ss_pred hhhhhhhhhcchhh----hh------hh-ccC-------Ccch---------HHHHHHHHHhcccCCCcEEEecchHhhh
Q 035856 87 MPYNGSAHIHTDLI----HQ------FF-INN-------CEES---------LFSSMLSKLGGVLPQASAAVMNFYQELY 139 (278)
Q Consensus 87 ~~~~~~~~~~~~~l----~~------~~-~~~-------~~~~---------~~~~~~~~~~~~~~~~~~~l~nt~~~le 139 (278)
+++....+++.... .. .+ +|| +.+. .+...+.+......+++++++|||++||
T Consensus 147 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~iPglp~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~a~~vlvNTf~eLE 226 (480)
T PLN02555 147 SCACFSAYYHYYHGLVPFPTETEPEIDVQLPCMPLLKYDEIPSFLHPSSPYPFLRRAILGQYKNLDKPFCILIDTFQELE 226 (480)
T ss_pred cHHHHHHHHHHhhcCCCcccccCCCceeecCCCCCcCHhhCcccccCCCCchHHHHHHHHHHHhcccCCEEEEEchHHHh
Confidence 99888776553210 00 00 222 1111 1122233444567789999999999999
Q ss_pred ccchhhHHHhhcCCeEEEecCCCCCCCCCCCC--C---C--CCcchhhhHhhhcCCCCC---------------------
Q 035856 140 CSSQLTNDLNSKVPSLLKVGFLTQPLPPPPLP--P---S--DSDETGYLQWLDRQKPKS--------------------- 191 (278)
Q Consensus 140 ~~~~~~~~~~~~~~~v~~VG~~~~pl~~~~~~--~---~--~~~~~~~~~wld~~~~~s--------------------- 191 (278)
+++++.+++..+ +++|| |+...... . . .+.+..|++|||+++++|
T Consensus 227 --~~~~~~l~~~~~-v~~iG----Pl~~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~~~~~q~~ela 299 (480)
T PLN02555 227 --KEIIDYMSKLCP-IKPVG----PLFKMAKTPNSDVKGDISKPADDCIEWLDSKPPSSVVYISFGTVVYLKQEQIDEIA 299 (480)
T ss_pred --HHHHHHHhhCCC-EEEeC----cccCccccccccccccccccchhHHHHHhCCCCCceeEEEeccccCCCHHHHHHHH
Confidence 999998876555 99999 99753211 1 1 123467999999998764
Q ss_pred --------------C--------------------CCCCeEEecCcchhhhcccccccEEEeeCCchhHHHHHHhCccee
Q 035856 192 --------------R--------------------TSGRGKIVLQAPQTQVLGHFSIGVFVIHSGANSVCESIANGVLMI 237 (278)
Q Consensus 192 --------------~--------------------~~~~~~v~~w~pq~~iL~~~~v~~fitHgG~~s~~eal~~GvP~l 237 (278)
+ .++|+++++|+||.+||+|++|++||||||||||+||+++|||||
T Consensus 300 ~~l~~~~~~flW~~~~~~~~~~~~~~~lp~~~~~~~~~~g~v~~W~PQ~~iL~H~~v~~FvtH~G~nS~~Eai~~GVP~l 379 (480)
T PLN02555 300 YGVLNSGVSFLWVMRPPHKDSGVEPHVLPEEFLEKAGDKGKIVQWCPQEKVLAHPSVACFVTHCGWNSTMEALSSGVPVV 379 (480)
T ss_pred HHHHhcCCeEEEEEecCcccccchhhcCChhhhhhcCCceEEEecCCHHHHhCCCccCeEEecCCcchHHHHHHcCCCEE
Confidence 1 124678889999999999999999999999999999999999999
Q ss_pred eccccCChhHHHHHHHHHhcceEEec-----CCCcCHHHHHhhhhC
Q 035856 238 CRPFYGDHRMNARMVEEVWGIGVKVE-----GILLTKSGVLQSLDL 278 (278)
Q Consensus 238 ~~P~~~DQ~~na~~~~~~~g~G~~l~-----~~~~~~~~l~~~i~~ 278 (278)
+||+++||+.||+++++.||+|++++ .+.+++++|+++|++
T Consensus 380 ~~P~~~DQ~~Na~~~~~~~gvGv~l~~~~~~~~~v~~~~v~~~v~~ 425 (480)
T PLN02555 380 CFPQWGDQVTDAVYLVDVFKTGVRLCRGEAENKLITREEVAECLLE 425 (480)
T ss_pred eCCCccccHHHHHHHHHHhCceEEccCCccccCcCcHHHHHHHHHH
Confidence 99999999999999999999999993 346899999999874
No 8
>PLN03004 UDP-glycosyltransferase
Probab=100.00 E-value=3.6e-48 Score=348.43 Aligned_cols=265 Identities=20% Similarity=0.313 Sum_probs=192.7
Q ss_pred CceEEecCCCCCCCCCCCC-CCcHHHHHHHHHHchHHHHHHHHHHHHcCCCCccEEEeCCCchhHHHHHHHcCCCeEeEe
Q 035856 6 NIRVYDVEDGVPMKYASTE-SNPLEAVELFVKATPENFKKGLDAAVSKTGRKISCFLTDAFLTFSGEMARDMHIPWFPVF 84 (278)
Q Consensus 6 ~i~~~~i~~glp~~~~~~~-~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~d~vI~D~~~~~~~~vA~~lgIP~v~~~ 84 (278)
+|+|+.+|+++|.+..... .+....+..+.+.....+++.++++.. +++++|||+|++++|+.++|+++|||++.|+
T Consensus 63 ~i~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~--~~pv~cII~D~~~~Wa~~vA~~lgIP~v~F~ 140 (451)
T PLN03004 63 SITFHHLPAVTPYSSSSTSRHHHESLLLEILCFSNPSVHRTLFSLSR--NFNVRAMIIDFFCTAVLDITADFTFPVYFFY 140 (451)
T ss_pred CeEEEEcCCCCCCCCccccccCHHHHHHHHHHhhhHHHHHHHHhcCC--CCCceEEEECCcchhHHHHHHHhCCCEEEEe
Confidence 6999999998763322221 122223333333333444444444311 2357999999999999999999999999999
Q ss_pred CChhhhhhhhhcchhhh---------hh--h-ccC-------CcchH-------HHHHHHHHhcccCCCcEEEecchHhh
Q 035856 85 VAMPYNGSAHIHTDLIH---------QF--F-INN-------CEESL-------FSSMLSKLGGVLPQASAAVMNFYQEL 138 (278)
Q Consensus 85 ~~~~~~~~~~~~~~~l~---------~~--~-~~~-------~~~~~-------~~~~~~~~~~~~~~~~~~l~nt~~~l 138 (278)
+++++....+++.+... +. + +|| +.+.. ....+.+....+.+++++++|||++|
T Consensus 141 t~sA~~~~~~~~~~~~~~~~~~~~~~~~~~v~iPg~p~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~vl~NTf~eL 220 (451)
T PLN03004 141 TSGAACLAFSFYLPTIDETTPGKNLKDIPTVHIPGVPPMKGSDMPKAVLERDDEVYDVFIMFGKQLSKSSGIIINTFDAL 220 (451)
T ss_pred CHhHHHHHHHHHHHhccccccccccccCCeecCCCCCCCChHHCchhhcCCchHHHHHHHHHHHhhcccCeeeeeeHHHh
Confidence 99998887776543211 00 0 222 11111 12333444456678899999999999
Q ss_pred hccchhhHHHhhcC--CeEEEecCCCCCCCCCCCC--CCCCcchhhhHhhhcCCCCC-----------------------
Q 035856 139 YCSSQLTNDLNSKV--PSLLKVGFLTQPLPPPPLP--PSDSDETGYLQWLDRQKPKS----------------------- 191 (278)
Q Consensus 139 e~~~~~~~~~~~~~--~~v~~VG~~~~pl~~~~~~--~~~~~~~~~~~wld~~~~~s----------------------- 191 (278)
| +++++.+++.. +++++|| |+...... ....++.+|++|||+++++|
T Consensus 221 E--~~~l~~l~~~~~~~~v~~vG----Pl~~~~~~~~~~~~~~~~c~~wLd~~~~~sVvyvsfGS~~~~~~~q~~ela~g 294 (451)
T PLN03004 221 E--NRAIKAITEELCFRNIYPIG----PLIVNGRIEDRNDNKAVSCLNWLDSQPEKSVVFLCFGSLGLFSKEQVIEIAVG 294 (451)
T ss_pred H--HHHHHHHHhcCCCCCEEEEe----eeccCccccccccchhhHHHHHHHhCCCCceEEEEecccccCCHHHHHHHHHH
Confidence 9 99999997753 6899999 99743211 11123457999999998766
Q ss_pred ------------CC---------------C--------CCeEE-ecCcchhhhcccccccEEEeeCCchhHHHHHHhCcc
Q 035856 192 ------------RT---------------S--------GRGKI-VLQAPQTQVLGHFSIGVFVIHSGANSVCESIANGVL 235 (278)
Q Consensus 192 ------------~~---------------~--------~~~~v-~~w~pq~~iL~~~~v~~fitHgG~~s~~eal~~GvP 235 (278)
+. + +++++ .+|+||.+||+|++||+|||||||||++||+++|||
T Consensus 295 L~~s~~~FlW~~r~~~~~~~~~~~~~~~lp~gf~er~~~~g~~v~~W~PQ~~iL~H~~v~~FvTH~G~nS~lEal~~GVP 374 (451)
T PLN03004 295 LEKSGQRFLWVVRNPPELEKTELDLKSLLPEGFLSRTEDKGMVVKSWAPQVPVLNHKAVGGFVTHCGWNSILEAVCAGVP 374 (451)
T ss_pred HHHCCCCEEEEEcCCccccccccchhhhCChHHHHhccCCcEEEEeeCCHHHHhCCCccceEeccCcchHHHHHHHcCCC
Confidence 21 1 14444 499999999999999999999999999999999999
Q ss_pred eeeccccCChhHHHHHHHHHhcceEEecCC---CcCHHHHHhhhhC
Q 035856 236 MICRPFYGDHRMNARMVEEVWGIGVKVEGI---LLTKSGVLQSLDL 278 (278)
Q Consensus 236 ~l~~P~~~DQ~~na~~~~~~~g~G~~l~~~---~~~~~~l~~~i~~ 278 (278)
||+||+++||+.||+++++.||+|++++.+ .+++++|+++|++
T Consensus 375 ~v~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~~~~~~e~l~~av~~ 420 (451)
T PLN03004 375 MVAWPLYAEQRFNRVMIVDEIKIAISMNESETGFVSSTEVEKRVQE 420 (451)
T ss_pred EEeccccccchhhHHHHHHHhCceEEecCCcCCccCHHHHHHHHHH
Confidence 999999999999999999888999999643 5799999999874
No 9
>PLN02670 transferase, transferring glycosyl groups
Probab=100.00 E-value=4.9e-48 Score=349.03 Aligned_cols=264 Identities=21% Similarity=0.262 Sum_probs=196.2
Q ss_pred CCceEEecC----CCCCCCCCCCCCCcHHHHHHHHHHchHHHHHHHHHHHHcCCCCccEEEeCCCchhHHHHHHHcCCCe
Q 035856 5 DNIRVYDVE----DGVPMKYASTESNPLEAVELFVKATPENFKKGLDAAVSKTGRKISCFLTDAFLTFSGEMARDMHIPW 80 (278)
Q Consensus 5 ~~i~~~~i~----~glp~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~d~vI~D~~~~~~~~vA~~lgIP~ 80 (278)
++|+|+.+| ||+|++.+++ .+.......+...+.+.+++.+++++++. +++|||+|.+++|+.++|+++|||+
T Consensus 58 ~~i~~~~lp~p~~dglp~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~cvI~D~f~~wa~~vA~~~gIP~ 134 (472)
T PLN02670 58 SSITLVSFPLPSVPGLPSSAESS-TDVPYTKQQLLKKAFDLLEPPLTTFLETS--KPDWIIYDYASHWLPSIAAELGISK 134 (472)
T ss_pred CCeeEEECCCCccCCCCCCcccc-cccchhhHHHHHHHHHHhHHHHHHHHHhC--CCcEEEECCcchhHHHHHHHcCCCE
Confidence 469999998 8999887754 23221111222344566888888888764 7899999999999999999999999
Q ss_pred EeEeCChhhhhhhhhcchhhh---------hhh--ccC-------------CcchHH---------HHHHHHHhcccCCC
Q 035856 81 FPVFVAMPYNGSAHIHTDLIH---------QFF--INN-------------CEESLF---------SSMLSKLGGVLPQA 127 (278)
Q Consensus 81 v~~~~~~~~~~~~~~~~~~l~---------~~~--~~~-------------~~~~~~---------~~~~~~~~~~~~~~ 127 (278)
+.|++++++....+++..... +.. .++ +.+..+ .....+....+.++
T Consensus 135 ~~f~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~P~~~~~~~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (472)
T PLN02670 135 AFFSLFTAATLSFIGPPSSLMEGGDLRSTAEDFTVVPPWVPFESNIVFRYHEVTKYVEKTEEDETGPSDSVRFGFAIGGS 214 (472)
T ss_pred EEEehhhHHHHHHHhhhHhhhhcccCCCccccccCCCCcCCCCccccccHHHhhHHHhccCccchHHHHHHHHHhhcccC
Confidence 999999988776654321110 000 111 111111 11122223346678
Q ss_pred cEEEecchHhhhccchhhHHHhhcC-CeEEEecCCCCCCCCCC-CCCC-C----CcchhhhHhhhcCCCCC---------
Q 035856 128 SAAVMNFYQELYCSSQLTNDLNSKV-PSLLKVGFLTQPLPPPP-LPPS-D----SDETGYLQWLDRQKPKS--------- 191 (278)
Q Consensus 128 ~~~l~nt~~~le~~~~~~~~~~~~~-~~v~~VG~~~~pl~~~~-~~~~-~----~~~~~~~~wld~~~~~s--------- 191 (278)
+++++|||++|| +++++++++.. +++++|| |+.+.. .... . ..+.+|++|||+++++|
T Consensus 215 ~gvlvNTf~eLE--~~~l~~l~~~~~~~v~~VG----Pl~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~ 288 (472)
T PLN02670 215 DVVIIRSSPEFE--PEWFDLLSDLYRKPIIPIG----FLPPVIEDDEEDDTIDVKGWVRIKEWLDKQRVNSVVYVALGTE 288 (472)
T ss_pred CEEEEeCHHHHh--HHHHHHHHHhhCCCeEEEe----cCCccccccccccccccchhHHHHHHHhcCCCCceEEEEeccc
Confidence 999999999999 99999998765 6899999 997531 1111 0 11256999999998765
Q ss_pred --------------------------C--------------------CCCCeEEe-cCcchhhhcccccccEEEeeCCch
Q 035856 192 --------------------------R--------------------TSGRGKIV-LQAPQTQVLGHFSIGVFVIHSGAN 224 (278)
Q Consensus 192 --------------------------~--------------------~~~~~~v~-~w~pq~~iL~~~~v~~fitHgG~~ 224 (278)
+ ..++|+++ +|+||.+||+|++||+||||||||
T Consensus 289 ~~l~~~q~~ela~gl~~s~~~FlWv~r~~~~~~~~~~~~lp~~f~~~~~~rG~vv~~W~PQ~~IL~H~~v~~FvtHcGwn 368 (472)
T PLN02670 289 ASLRREEVTELALGLEKSETPFFWVLRNEPGTTQNALEMLPDGFEERVKGRGMIHVGWVPQVKILSHESVGGFLTHCGWN 368 (472)
T ss_pred ccCCHHHHHHHHHHHHHCCCCEEEEEcCCcccccchhhcCChHHHHhccCCCeEEeCcCCHHHHhcCcccceeeecCCcc
Confidence 2 12334664 999999999999999999999999
Q ss_pred hHHHHHHhCcceeeccccCChhHHHHHHHHHhcceEEecC----CCcCHHHHHhhhhC
Q 035856 225 SVCESIANGVLMICRPFYGDHRMNARMVEEVWGIGVKVEG----ILLTKSGVLQSLDL 278 (278)
Q Consensus 225 s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l~~----~~~~~~~l~~~i~~ 278 (278)
||+||+++|||||+||+++||+.||+++++ ||+|++++. +.+++++|+++|++
T Consensus 369 S~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~-~g~Gv~l~~~~~~~~~~~e~i~~av~~ 425 (472)
T PLN02670 369 SVVEGLGFGRVLILFPVLNEQGLNTRLLHG-KKLGLEVPRDERDGSFTSDSVAESVRL 425 (472)
T ss_pred hHHHHHHcCCCEEeCcchhccHHHHHHHHH-cCeeEEeeccccCCcCcHHHHHHHHHH
Confidence 999999999999999999999999999987 599999963 35899999999874
No 10
>PLN02207 UDP-glycosyltransferase
Probab=100.00 E-value=7.1e-48 Score=347.61 Aligned_cols=266 Identities=22% Similarity=0.296 Sum_probs=196.5
Q ss_pred CceEEecCCCCCCCC-CCCCCCcHHHHHHHHHHchHHHHHHHHHHHHcC---CCCccEEEeCCCchhHHHHHHHcCCCeE
Q 035856 6 NIRVYDVEDGVPMKY-ASTESNPLEAVELFVKATPENFKKGLDAAVSKT---GRKISCFLTDAFLTFSGEMARDMHIPWF 81 (278)
Q Consensus 6 ~i~~~~i~~glp~~~-~~~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~---~~~~d~vI~D~~~~~~~~vA~~lgIP~v 81 (278)
+|+|+.|||+.+... ... .+....+..+.+...+.+++.+++++++. +++++|||+|.+++|+.++|+++|||++
T Consensus 62 ~i~~~~lp~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pv~cvV~D~~~~w~~~vA~~~gip~~ 140 (468)
T PLN02207 62 FVRFIDVPELEEKPTLGGT-QSVEAYVYDVIEKNIPLVRNIVMDILSSLALDGVKVKGFVADFFCLPMIDVAKDVSLPFY 140 (468)
T ss_pred CeEEEEeCCCCCCCccccc-cCHHHHHHHHHHhcchhHHHHHHHHHHHhccCCCCeEEEEECCcchHHHHHHHHhCCCEE
Confidence 699999997643111 111 23333443444455555677777776642 1346999999999999999999999999
Q ss_pred eEeCChhhhhhhhhcchhhhh-----------h-h-ccC--------CcchHH-----HHHHHHHhcccCCCcEEEecch
Q 035856 82 PVFVAMPYNGSAHIHTDLIHQ-----------F-F-INN--------CEESLF-----SSMLSKLGGVLPQASAAVMNFY 135 (278)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~l~~-----------~-~-~~~--------~~~~~~-----~~~~~~~~~~~~~~~~~l~nt~ 135 (278)
.|++++++....+++.+.... . + +|| +.+..+ ...+.+....+.+++++++|||
T Consensus 141 ~f~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vPgl~~~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~vlvNtf 220 (468)
T PLN02207 141 VFLTTNSGFLAMMQYLADRHSKDTSVFVRNSEEMLSIPGFVNPVPANVLPSALFVEDGYDAYVKLAILFTKANGILVNSS 220 (468)
T ss_pred EEECccHHHHHHHHHhhhccccccccCcCCCCCeEECCCCCCCCChHHCcchhcCCccHHHHHHHHHhcccCCEEEEEch
Confidence 999999887776554321110 0 0 222 111101 1223333446778999999999
Q ss_pred HhhhccchhhHHHhh--cCCeEEEecCCCCCCCCCCCCCCC----CcchhhhHhhhcCCCCC------------------
Q 035856 136 QELYCSSQLTNDLNS--KVPSLLKVGFLTQPLPPPPLPPSD----SDETGYLQWLDRQKPKS------------------ 191 (278)
Q Consensus 136 ~~le~~~~~~~~~~~--~~~~v~~VG~~~~pl~~~~~~~~~----~~~~~~~~wld~~~~~s------------------ 191 (278)
++|| .++++.+++ ..|++++|| |++........ .++.+|++|||+++++|
T Consensus 221 ~~LE--~~~~~~~~~~~~~p~v~~VG----Pl~~~~~~~~~~~~~~~~~~~~~WLd~~~~~sVVyvSfGS~~~~~~~q~~ 294 (468)
T PLN02207 221 FDIE--PYSVNHFLDEQNYPSVYAVG----PIFDLKAQPHPEQDLARRDELMKWLDDQPEASVVFLCFGSMGRLRGPLVK 294 (468)
T ss_pred HHHh--HHHHHHHHhccCCCcEEEec----CCcccccCCCCccccchhhHHHHHHhcCCCCcEEEEEeccCcCCCHHHHH
Confidence 9999 998888854 458899999 99853321111 23357999999998765
Q ss_pred -----------------C-----------------CCCCeEEecCcchhhhcccccccEEEeeCCchhHHHHHHhCccee
Q 035856 192 -----------------R-----------------TSGRGKIVLQAPQTQVLGHFSIGVFVIHSGANSVCESIANGVLMI 237 (278)
Q Consensus 192 -----------------~-----------------~~~~~~v~~w~pq~~iL~~~~v~~fitHgG~~s~~eal~~GvP~l 237 (278)
+ .++|+++++|+||.+||+|+++|+|||||||||++||+++|||||
T Consensus 295 ela~~l~~~~~~flW~~r~~~~~~~~~lp~~f~er~~~~g~i~~W~PQ~~IL~H~~vg~FvTH~GwnS~~Eai~~GVP~l 374 (468)
T PLN02207 295 EIAHGLELCQYRFLWSLRTEEVTNDDLLPEGFLDRVSGRGMICGWSPQVEILAHKAVGGFVSHCGWNSIVESLWFGVPIV 374 (468)
T ss_pred HHHHHHHHCCCcEEEEEeCCCccccccCCHHHHhhcCCCeEEEEeCCHHHHhcccccceeeecCccccHHHHHHcCCCEE
Confidence 1 346788889999999999999999999999999999999999999
Q ss_pred eccccCChhHHHHHHHHHhcceEEec-------CCCcCHHHHHhhhhC
Q 035856 238 CRPFYGDHRMNARMVEEVWGIGVKVE-------GILLTKSGVLQSLDL 278 (278)
Q Consensus 238 ~~P~~~DQ~~na~~~~~~~g~G~~l~-------~~~~~~~~l~~~i~~ 278 (278)
+||+++||+.||+++++.||+|+++. .+.+++++|+++|++
T Consensus 375 ~~P~~~DQ~~Na~~~~~~~gvGv~~~~~~~~~~~~~v~~e~i~~av~~ 422 (468)
T PLN02207 375 TWPMYAEQQLNAFLMVKELKLAVELKLDYRVHSDEIVNANEIETAIRC 422 (468)
T ss_pred ecCccccchhhHHHHHHHhCceEEEecccccccCCcccHHHHHHHHHH
Confidence 99999999999999999889999873 134699999999874
No 11
>PLN02167 UDP-glycosyltransferase family protein
Probab=100.00 E-value=8.7e-48 Score=350.59 Aligned_cols=267 Identities=22% Similarity=0.281 Sum_probs=196.2
Q ss_pred CceEEecCCCC-CCCCCCCCCCcHHHHHHHHHHchHHHHHHHHHHHHcC---CC-CccEEEeCCCchhHHHHHHHcCCCe
Q 035856 6 NIRVYDVEDGV-PMKYASTESNPLEAVELFVKATPENFKKGLDAAVSKT---GR-KISCFLTDAFLTFSGEMARDMHIPW 80 (278)
Q Consensus 6 ~i~~~~i~~gl-p~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~---~~-~~d~vI~D~~~~~~~~vA~~lgIP~ 80 (278)
+|+|++||++. |++.+....++...+..+.+.+.+.+++.++++..+. +. +++|||+|.+++|+.++|+++|||+
T Consensus 63 ~i~~~~lp~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~pv~cvV~D~f~~Wa~dVA~elgIP~ 142 (475)
T PLN02167 63 RIRLVTLPEVQDPPPMELFVKASEAYILEFVKKMVPLVRDALSTLVSSRDESDSVRVAGLVLDFFCVPLIDVGNEFNLPS 142 (475)
T ss_pred CeEEEECCCCCCCccccccccchHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCeEEEEECCccHHHHHHHHHhCCCE
Confidence 69999999865 3222211123333444455566677888888765432 12 5699999999999999999999999
Q ss_pred EeEeCChhhhhhhhhcchhhh-----h----h----h-ccC--------Ccch-----HHHHHHHHHhcccCCCcEEEec
Q 035856 81 FPVFVAMPYNGSAHIHTDLIH-----Q----F----F-INN--------CEES-----LFSSMLSKLGGVLPQASAAVMN 133 (278)
Q Consensus 81 v~~~~~~~~~~~~~~~~~~l~-----~----~----~-~~~--------~~~~-----~~~~~~~~~~~~~~~~~~~l~n 133 (278)
+.|++++++....+++.+... . . + +|| +.+. .......+..+...+++++++|
T Consensus 143 v~F~t~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iPgl~~~l~~~dlp~~~~~~~~~~~~~~~~~~~~~a~~vlvN 222 (475)
T PLN02167 143 YIFLTCNAGFLGMMKYLPERHRKTASEFDLSSGEEELPIPGFVNSVPTKVLPPGLFMKESYEAWVEIAERFPEAKGILVN 222 (475)
T ss_pred EEEECccHHHHHHHHHHHHhccccccccccCCCCCeeECCCCCCCCChhhCchhhhCcchHHHHHHHHHhhcccCEeeec
Confidence 999999998877665432110 0 0 0 222 1111 0112233444567789999999
Q ss_pred chHhhhccchhhHHHhhc---CCeEEEecCCCCCCCCCCCC---CC-CCcchhhhHhhhcCCCCC---------------
Q 035856 134 FYQELYCSSQLTNDLNSK---VPSLLKVGFLTQPLPPPPLP---PS-DSDETGYLQWLDRQKPKS--------------- 191 (278)
Q Consensus 134 t~~~le~~~~~~~~~~~~---~~~v~~VG~~~~pl~~~~~~---~~-~~~~~~~~~wld~~~~~s--------------- 191 (278)
||++|| +++++++++. +|++++|| |++..... .. ..++.+|++|||+++++|
T Consensus 223 Tf~eLE--~~~~~~l~~~~~~~p~v~~vG----pl~~~~~~~~~~~~~~~~~~~~~wld~~~~~svvyvsfGS~~~~~~~ 296 (475)
T PLN02167 223 SFTELE--PNAFDYFSRLPENYPPVYPVG----PILSLKDRTSPNLDSSDRDRIMRWLDDQPESSVVFLCFGSLGSLPAP 296 (475)
T ss_pred cHHHHH--HHHHHHHHhhcccCCeeEEec----cccccccccCCCCCcchhHHHHHHHhcCCCCceEEEeecccccCCHH
Confidence 999999 9999988654 47899999 99763221 11 122357999999998765
Q ss_pred --------------------C------------CC--------CCeEEecCcchhhhcccccccEEEeeCCchhHHHHHH
Q 035856 192 --------------------R------------TS--------GRGKIVLQAPQTQVLGHFSIGVFVIHSGANSVCESIA 231 (278)
Q Consensus 192 --------------------~------------~~--------~~~~v~~w~pq~~iL~~~~v~~fitHgG~~s~~eal~ 231 (278)
+ .+ ++|++++|+||.+||+|++||+||||||||||+||++
T Consensus 297 ~~~ela~~l~~~~~~flw~~~~~~~~~~~~~~~lp~~~~er~~~rg~v~~w~PQ~~iL~h~~vg~fvtH~G~nS~~Eal~ 376 (475)
T PLN02167 297 QIKEIAQALELVGCRFLWSIRTNPAEYASPYEPLPEGFMDRVMGRGLVCGWAPQVEILAHKAIGGFVSHCGWNSVLESLW 376 (475)
T ss_pred HHHHHHHHHHhCCCcEEEEEecCcccccchhhhCChHHHHHhccCeeeeccCCHHHHhcCcccCeEEeeCCcccHHHHHH
Confidence 1 11 2357789999999999999999999999999999999
Q ss_pred hCcceeeccccCChhHHHHHHHHHhcceEEecC-------CCcCHHHHHhhhhC
Q 035856 232 NGVLMICRPFYGDHRMNARMVEEVWGIGVKVEG-------ILLTKSGVLQSLDL 278 (278)
Q Consensus 232 ~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l~~-------~~~~~~~l~~~i~~ 278 (278)
+|||||+||+++||+.||+++++.||+|++++. +.+++++|+++|++
T Consensus 377 ~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~l~~av~~ 430 (475)
T PLN02167 377 FGVPIATWPMYAEQQLNAFTMVKELGLAVELRLDYVSAYGEIVKADEIAGAVRS 430 (475)
T ss_pred cCCCEEeccccccchhhHHHHHHHhCeeEEeecccccccCCcccHHHHHHHHHH
Confidence 999999999999999999987766799999853 35799999999863
No 12
>PLN00164 glucosyltransferase; Provisional
Probab=100.00 E-value=1.2e-47 Score=349.15 Aligned_cols=259 Identities=22% Similarity=0.325 Sum_probs=191.7
Q ss_pred CceEEecCCCC-CCCCCCCCCCcHHHHHHHHHHchHHHHHHHHHHHHcCCCCccEEEeCCCchhHHHHHHHcCCCeEeEe
Q 035856 6 NIRVYDVEDGV-PMKYASTESNPLEAVELFVKATPENFKKGLDAAVSKTGRKISCFLTDAFLTFSGEMARDMHIPWFPVF 84 (278)
Q Consensus 6 ~i~~~~i~~gl-p~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~d~vI~D~~~~~~~~vA~~lgIP~v~~~ 84 (278)
+|+|+++|++. |++.+ +...++..+ ...+++.+++++++.+.+++|||+|++++|+.++|+++|||++.|+
T Consensus 67 ~i~~~~lp~~~~p~~~e----~~~~~~~~~----~~~~~~~l~~~L~~l~~pv~cIV~D~f~~Wa~dVA~elgIP~v~F~ 138 (480)
T PLN00164 67 DIRFHHLPAVEPPTDAA----GVEEFISRY----IQLHAPHVRAAIAGLSCPVAALVVDFFCTPLLDVARELAVPAYVYF 138 (480)
T ss_pred CEEEEECCCCCCCCccc----cHHHHHHHH----HHhhhHHHHHHHHhcCCCceEEEECCcchhHHHHHHHhCCCEEEEE
Confidence 59999999874 33332 222333323 2345566666665543467999999999999999999999999999
Q ss_pred CChhhhhhhhhcchhhhhh------------hccC-------Ccch-------HHHHHHHHHhcccCCCcEEEecchHhh
Q 035856 85 VAMPYNGSAHIHTDLIHQF------------FINN-------CEES-------LFSSMLSKLGGVLPQASAAVMNFYQEL 138 (278)
Q Consensus 85 ~~~~~~~~~~~~~~~l~~~------------~~~~-------~~~~-------~~~~~~~~~~~~~~~~~~~l~nt~~~l 138 (278)
+++++....+++.+..... .+|| +++. .....+....+.+.+++++++|||++|
T Consensus 139 t~sA~~~~~~~~~~~~~~~~~~~~~~~~~~~~iPGlp~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eL 218 (480)
T PLN00164 139 TSTAAMLALMLRLPALDEEVAVEFEEMEGAVDVPGLPPVPASSLPAPVMDKKSPNYAWFVYHGRRFMEAAGIIVNTAAEL 218 (480)
T ss_pred CccHHHHHHHhhhhhhcccccCcccccCcceecCCCCCCChHHCCchhcCCCcHHHHHHHHHHHhhhhcCEEEEechHHh
Confidence 9999888777654321100 0222 1111 112223333455678999999999999
Q ss_pred hccchhhHHHhhc-------CCeEEEecCCCCCCCCCCCC-CCCCcchhhhHhhhcCCCCC-------------------
Q 035856 139 YCSSQLTNDLNSK-------VPSLLKVGFLTQPLPPPPLP-PSDSDETGYLQWLDRQKPKS------------------- 191 (278)
Q Consensus 139 e~~~~~~~~~~~~-------~~~v~~VG~~~~pl~~~~~~-~~~~~~~~~~~wld~~~~~s------------------- 191 (278)
| +++++++++. .++++.|| |++..... ....++.+|++|||+++++|
T Consensus 219 E--~~~~~~~~~~~~~~~~~~~~v~~vG----Pl~~~~~~~~~~~~~~~~~~wLd~~~~~svvyvsfGS~~~~~~~q~~e 292 (480)
T PLN00164 219 E--PGVLAAIADGRCTPGRPAPTVYPIG----PVISLAFTPPAEQPPHECVRWLDAQPPASVVFLCFGSMGFFDAPQVRE 292 (480)
T ss_pred h--HHHHHHHHhccccccCCCCceEEeC----CCccccccCCCccchHHHHHHHHhCCCCceEEEEecccccCCHHHHHH
Confidence 9 9999988764 25899999 99743211 11134567999999998875
Q ss_pred ----------------CCC--------------------------CCeEEe-cCcchhhhcccccccEEEeeCCchhHHH
Q 035856 192 ----------------RTS--------------------------GRGKIV-LQAPQTQVLGHFSIGVFVIHSGANSVCE 228 (278)
Q Consensus 192 ----------------~~~--------------------------~~~~v~-~w~pq~~iL~~~~v~~fitHgG~~s~~e 228 (278)
+.+ ++|+++ +|+||.+||+|++||+||||||||||+|
T Consensus 293 la~gL~~s~~~flWv~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~g~~v~~w~PQ~~iL~h~~vg~fvtH~GwnS~~E 372 (480)
T PLN00164 293 IAAGLERSGHRFLWVLRGPPAAGSRHPTDADLDELLPEGFLERTKGRGLVWPTWAPQKEILAHAAVGGFVTHCGWNSVLE 372 (480)
T ss_pred HHHHHHHcCCCEEEEEcCCcccccccccccchhhhCChHHHHHhcCCCeEEeecCCHHHHhcCcccCeEEeecccchHHH
Confidence 210 134555 8999999999999999999999999999
Q ss_pred HHHhCcceeeccccCChhHHHHHHHHHhcceEEecC-----CCcCHHHHHhhhhC
Q 035856 229 SIANGVLMICRPFYGDHRMNARMVEEVWGIGVKVEG-----ILLTKSGVLQSLDL 278 (278)
Q Consensus 229 al~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l~~-----~~~~~~~l~~~i~~ 278 (278)
|+++|||||+||+++||+.||+++++.||+|++++. +.+++++|+++|++
T Consensus 373 ai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvG~~~~~~~~~~~~~~~e~l~~av~~ 427 (480)
T PLN00164 373 SLWHGVPMAPWPLYAEQHLNAFELVADMGVAVAMKVDRKRDNFVEAAELERAVRS 427 (480)
T ss_pred HHHcCCCEEeCCccccchhHHHHHHHHhCeEEEeccccccCCcCcHHHHHHHHHH
Confidence 999999999999999999999999887899999852 34799999999863
No 13
>PLN02534 UDP-glycosyltransferase
Probab=100.00 E-value=2.9e-47 Score=345.51 Aligned_cols=266 Identities=25% Similarity=0.405 Sum_probs=197.6
Q ss_pred CceEEecC-----CCCCCCCCCCCCCcH-HHHHHHHHHchHHHHHHHHHHHHcCCCCccEEEeCCCchhHHHHHHHcCCC
Q 035856 6 NIRVYDVE-----DGVPMKYASTESNPL-EAVELFVKATPENFKKGLDAAVSKTGRKISCFLTDAFLTFSGEMARDMHIP 79 (278)
Q Consensus 6 ~i~~~~i~-----~glp~~~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~l~~~~~~~~d~vI~D~~~~~~~~vA~~lgIP 79 (278)
.|+|+.+| ||||++.+++...+. .+...+..++ +.+++.+++++++.+.+++|||+|.+++|+.++|+++|||
T Consensus 64 ~i~~~~lp~p~~~dglp~~~~~~~~~~~~~~~~~~~~~~-~~l~~~l~~lL~~~~~pp~cIV~D~f~~Wa~dVA~~lgIP 142 (491)
T PLN02534 64 PIRLVQIPFPCKEVGLPIGCENLDTLPSRDLLRKFYDAV-DKLQQPLERFLEQAKPPPSCIISDKCLSWTSKTAQRFNIP 142 (491)
T ss_pred CeEEEEcCCCCccCCCCCCccccccCCcHHHHHHHHHHH-HHhHHHHHHHHHhcCCCCcEEEECCccHHHHHHHHHhCCC
Confidence 39999998 799998776533333 3444454433 4688888888876555789999999999999999999999
Q ss_pred eEeEeCChhhhhhhhhcch----hh---hh--h-hccC----------CcchH------HHHHHHHHhcccCCCcEEEec
Q 035856 80 WFPVFVAMPYNGSAHIHTD----LI---HQ--F-FINN----------CEESL------FSSMLSKLGGVLPQASAAVMN 133 (278)
Q Consensus 80 ~v~~~~~~~~~~~~~~~~~----~l---~~--~-~~~~----------~~~~~------~~~~~~~~~~~~~~~~~~l~n 133 (278)
++.|++++++....+++.. .. .+ . .+|+ +.+.. +......+......++++++|
T Consensus 143 ~v~F~t~~a~~~~~~~~~~~~~~~~~~~~~~~~~~iPg~p~~~~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~a~~vlvN 222 (491)
T PLN02534 143 RIVFHGMCCFSLLSSHNIRLHNAHLSVSSDSEPFVVPGMPQSIEITRAQLPGAFVSLPDLDDVRNKMREAESTAFGVVVN 222 (491)
T ss_pred eEEEecchHHHHHHHHHHHHhcccccCCCCCceeecCCCCccccccHHHCChhhcCcccHHHHHHHHHhhcccCCEEEEe
Confidence 9999999988776543111 00 00 0 0122 11111 111122222233457899999
Q ss_pred chHhhhccchhhHHHhhcC-CeEEEecCCCCCCCCCCCC-------C-C-CCcchhhhHhhhcCCCCC------------
Q 035856 134 FYQELYCSSQLTNDLNSKV-PSLLKVGFLTQPLPPPPLP-------P-S-DSDETGYLQWLDRQKPKS------------ 191 (278)
Q Consensus 134 t~~~le~~~~~~~~~~~~~-~~v~~VG~~~~pl~~~~~~-------~-~-~~~~~~~~~wld~~~~~s------------ 191 (278)
||++|| +++++++++.+ +++|+|| |+...... . . ..+++.|++|||+++++|
T Consensus 223 Tf~eLE--~~~l~~l~~~~~~~v~~VG----PL~~~~~~~~~~~~~~~~~~~~~~~cl~wLd~~~~~sVvyvsfGS~~~~ 296 (491)
T PLN02534 223 SFNELE--HGCAEAYEKAIKKKVWCVG----PVSLCNKRNLDKFERGNKASIDETQCLEWLDSMKPRSVIYACLGSLCRL 296 (491)
T ss_pred cHHHhh--HHHHHHHHhhcCCcEEEEC----cccccccccccccccCCccccchHHHHHHHhcCCCCceEEEEecccccC
Confidence 999999 99999998766 6899999 99742110 0 0 113457999999999865
Q ss_pred -----------------------CC--------------------CCCeEEe-cCcchhhhcccccccEEEeeCCchhHH
Q 035856 192 -----------------------RT--------------------SGRGKIV-LQAPQTQVLGHFSIGVFVIHSGANSVC 227 (278)
Q Consensus 192 -----------------------~~--------------------~~~~~v~-~w~pq~~iL~~~~v~~fitHgG~~s~~ 227 (278)
+. .++++++ +|+||.+||+|++||+|||||||||++
T Consensus 297 ~~~q~~e~a~gl~~~~~~flW~~r~~~~~~~~~~~~~p~gf~~~~~~~g~~v~~w~pq~~iL~h~~v~~fvtH~G~ns~~ 376 (491)
T PLN02534 297 VPSQLIELGLGLEASKKPFIWVIKTGEKHSELEEWLVKENFEERIKGRGLLIKGWAPQVLILSHPAIGGFLTHCGWNSTI 376 (491)
T ss_pred CHHHHHHHHHHHHhCCCCEEEEEecCccccchhhhcCchhhHHhhccCCeeccCCCCHHHHhcCCccceEEecCccHHHH
Confidence 21 1345555 899999999999999999999999999
Q ss_pred HHHHhCcceeeccccCChhHHHHHHHHHhcceEEecC------------C-CcCHHHHHhhhhC
Q 035856 228 ESIANGVLMICRPFYGDHRMNARMVEEVWGIGVKVEG------------I-LLTKSGVLQSLDL 278 (278)
Q Consensus 228 eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l~~------------~-~~~~~~l~~~i~~ 278 (278)
||+++|||||+||+++||+.||+++++.||+|+++.. + .+++++|+++|++
T Consensus 377 ea~~~GvP~v~~P~~~dq~~na~~~~e~~~vGv~~~~~~~~~~~~~~~~~~~v~~eev~~~v~~ 440 (491)
T PLN02534 377 EGICSGVPMITWPLFAEQFLNEKLIVEVLRIGVRVGVEVPVRWGDEERVGVLVKKDEVEKAVKT 440 (491)
T ss_pred HHHHcCCCEEeccccccHHHHHHHHHHhhcceEEecccccccccccccccCccCHHHHHHHHHH
Confidence 9999999999999999999999999999999999841 1 4899999999874
No 14
>PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=100.00 E-value=3.5e-47 Score=345.31 Aligned_cols=265 Identities=20% Similarity=0.252 Sum_probs=196.3
Q ss_pred CceEEecC----CCCCCCCCCCCCCcHHHHHHHHHHchHHHHHHHHHHHHcCCCCccEEEeCCCchhHHHHHHHcCCCeE
Q 035856 6 NIRVYDVE----DGVPMKYASTESNPLEAVELFVKATPENFKKGLDAAVSKTGRKISCFLTDAFLTFSGEMARDMHIPWF 81 (278)
Q Consensus 6 ~i~~~~i~----~glp~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~d~vI~D~~~~~~~~vA~~lgIP~v 81 (278)
+|+|+.+| +++|+|.+++.+.+......+..++ ..+.+.+.+++++.+.+++|||+|.+++|+.++|+++|||++
T Consensus 61 ~i~~~~lp~P~~~~lPdG~~~~~~~~~~~~~~~~~a~-~~~~~~~~~~l~~~~~~p~cvI~D~f~~Wa~dVA~e~GIP~~ 139 (477)
T PLN02863 61 SIETLVLPFPSHPSIPSGVENVKDLPPSGFPLMIHAL-GELYAPLLSWFRSHPSPPVAIISDMFLGWTQNLACQLGIRRF 139 (477)
T ss_pred CeeEEeCCCCCcCCCCCCCcChhhcchhhHHHHHHHH-HHhHHHHHHHHHhCCCCCeEEEEcCchHhHHHHHHHcCCCEE
Confidence 58888765 4899888766433434444454443 346666666776644578999999999999999999999999
Q ss_pred eEeCChhhhhhhhhcchhh-h------h---h----hccC-------Ccch---------HHHHHHHHHhcccCCCcEEE
Q 035856 82 PVFVAMPYNGSAHIHTDLI-H------Q---F----FINN-------CEES---------LFSSMLSKLGGVLPQASAAV 131 (278)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~l-~------~---~----~~~~-------~~~~---------~~~~~~~~~~~~~~~~~~~l 131 (278)
.|++++++....+++...- . . . .+|| +.+. .+...+.+.......+++++
T Consensus 140 ~F~t~sA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iPg~~~~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl 219 (477)
T PLN02863 140 VFSPSGAMALSIMYSLWREMPTKINPDDQNEILSFSKIPNCPKYPWWQISSLYRSYVEGDPAWEFIKDSFRANIASWGLV 219 (477)
T ss_pred EEeccCHHHHHHHHHHhhcccccccccccccccccCCCCCCCCcChHhCchhhhccCccchHHHHHHHHHhhhccCCEEE
Confidence 9999999988877653210 0 0 0 0232 1111 11122222233345778899
Q ss_pred ecchHhhhccchhhHHHhhcC--CeEEEecCCCCCCCCCCCCC---------CCCcchhhhHhhhcCCCCC---------
Q 035856 132 MNFYQELYCSSQLTNDLNSKV--PSLLKVGFLTQPLPPPPLPP---------SDSDETGYLQWLDRQKPKS--------- 191 (278)
Q Consensus 132 ~nt~~~le~~~~~~~~~~~~~--~~v~~VG~~~~pl~~~~~~~---------~~~~~~~~~~wld~~~~~s--------- 191 (278)
+|||++|| +++++++++.+ +++++|| |+.+..... ....+++|+.|||.++++|
T Consensus 220 vNTf~eLE--~~~~~~~~~~~~~~~v~~IG----PL~~~~~~~~~~~~~~~~~~~~~~~~~~WLd~~~~~svVyvsfGS~ 293 (477)
T PLN02863 220 VNSFTELE--GIYLEHLKKELGHDRVWAVG----PILPLSGEKSGLMERGGPSSVSVDDVMTWLDTCEDHKVVYVCFGSQ 293 (477)
T ss_pred EecHHHHH--HHHHHHHHhhcCCCCeEEeC----CCcccccccccccccCCcccccHHHHHHHHhcCCCCceEEEEeece
Confidence 99999999 99999998865 6899999 997532100 0112457999999998765
Q ss_pred --------------------------C-----------CC--------CCeEEe-cCcchhhhcccccccEEEeeCCchh
Q 035856 192 --------------------------R-----------TS--------GRGKIV-LQAPQTQVLGHFSIGVFVIHSGANS 225 (278)
Q Consensus 192 --------------------------~-----------~~--------~~~~v~-~w~pq~~iL~~~~v~~fitHgG~~s 225 (278)
+ .+ ++++++ +|+||.+||+|++|++|||||||||
T Consensus 294 ~~~~~~~~~ela~gL~~~~~~flw~~~~~~~~~~~~~~lp~~~~~r~~~~g~~v~~w~PQ~~vL~h~~v~~fvtH~G~nS 373 (477)
T PLN02863 294 VVLTKEQMEALASGLEKSGVHFIWCVKEPVNEESDYSNIPSGFEDRVAGRGLVIRGWAPQVAILSHRAVGAFLTHCGWNS 373 (477)
T ss_pred ecCCHHHHHHHHHHHHhCCCcEEEEECCCcccccchhhCCHHHHHHhccCCEEecCCCCHHHHhcCCCcCeEEecCCchH
Confidence 1 11 224454 9999999999999999999999999
Q ss_pred HHHHHHhCcceeeccccCChhHHHHHHHHHhcceEEecC---CCcCHHHHHhhhh
Q 035856 226 VCESIANGVLMICRPFYGDHRMNARMVEEVWGIGVKVEG---ILLTKSGVLQSLD 277 (278)
Q Consensus 226 ~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l~~---~~~~~~~l~~~i~ 277 (278)
++||+++|||||+||+++||+.||+++++.||+|+++.. +.++++++.++|+
T Consensus 374 ~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~~gvG~~~~~~~~~~~~~~~v~~~v~ 428 (477)
T PLN02863 374 VLEGLVAGVPMLAWPMAADQFVNASLLVDELKVAVRVCEGADTVPDSDELARVFM 428 (477)
T ss_pred HHHHHHcCCCEEeCCccccchhhHHHHHHhhceeEEeccCCCCCcCHHHHHHHHH
Confidence 999999999999999999999999999988899999943 3468999999886
No 15
>PLN02562 UDP-glycosyltransferase
Probab=100.00 E-value=6.3e-47 Score=342.06 Aligned_cols=258 Identities=21% Similarity=0.313 Sum_probs=190.4
Q ss_pred CceEEecCCCCCCCCCCCCCCcHHHHHHHHHHchHHHHHHHHHHHHcCC--CCccEEEeCCCchhHHHHHHHcCCCeEeE
Q 035856 6 NIRVYDVEDGVPMKYASTESNPLEAVELFVKATPENFKKGLDAAVSKTG--RKISCFLTDAFLTFSGEMARDMHIPWFPV 83 (278)
Q Consensus 6 ~i~~~~i~~glp~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~--~~~d~vI~D~~~~~~~~vA~~lgIP~v~~ 83 (278)
+|+|+.+|+|++++.. .+.. .+.+++...+++.+++++++.. .+++|||+|.+++|+.++|+++|||++.|
T Consensus 58 ~i~~v~lp~g~~~~~~---~~~~----~l~~a~~~~~~~~l~~ll~~l~~~~pv~cvI~D~~~~w~~~vA~~~giP~~~f 130 (448)
T PLN02562 58 GITFMSISDGQDDDPP---RDFF----SIENSMENTMPPQLERLLHKLDEDGEVACMVVDLLASWAIGVADRCGVPVAGF 130 (448)
T ss_pred CEEEEECCCCCCCCcc---ccHH----HHHHHHHHhchHHHHHHHHHhcCCCCcEEEEECCccHhHHHHHHHhCCCEEEE
Confidence 6999999999875321 1212 2222332234555555554431 35699999999999999999999999999
Q ss_pred eCChhhhhhhhhcchhhhh--------------h--hccC-------Ccc---------hHHHHHHHHHhcccCCCcEEE
Q 035856 84 FVAMPYNGSAHIHTDLIHQ--------------F--FINN-------CEE---------SLFSSMLSKLGGVLPQASAAV 131 (278)
Q Consensus 84 ~~~~~~~~~~~~~~~~l~~--------------~--~~~~-------~~~---------~~~~~~~~~~~~~~~~~~~~l 131 (278)
++++++....+++.+.+.. . .+|+ +.+ ....+.+.+......++++++
T Consensus 131 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pg~~~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl 210 (448)
T PLN02562 131 WPVMLAAYRLIQAIPELVRTGLISETGCPRQLEKICVLPEQPLLSTEDLPWLIGTPKARKARFKFWTRTLERTKSLRWIL 210 (448)
T ss_pred echhHHHHHHHHHHHHHhhccccccccccccccccccCCCCCCCChhhCcchhcCCCcchHHHHHHHHHHhccccCCEEE
Confidence 9999877665543321100 0 0222 111 111233444455677899999
Q ss_pred ecchHhhhccchhhHHHhh-----cCCeEEEecCCCCCCCCCCCC---CC--CCcchhhhHhhhcCCCCC----------
Q 035856 132 MNFYQELYCSSQLTNDLNS-----KVPSLLKVGFLTQPLPPPPLP---PS--DSDETGYLQWLDRQKPKS---------- 191 (278)
Q Consensus 132 ~nt~~~le~~~~~~~~~~~-----~~~~v~~VG~~~~pl~~~~~~---~~--~~~~~~~~~wld~~~~~s---------- 191 (278)
+|||++|| +++++.++. ..|++++|| |++..... .. ..++.+|++|||+++++|
T Consensus 211 vNTf~eLE--~~~~~~~~~~~~~~~~~~v~~iG----pl~~~~~~~~~~~~~~~~~~~c~~wLd~~~~~svvyvsfGS~~ 284 (448)
T PLN02562 211 MNSFKDEE--YDDVKNHQASYNNGQNPQILQIG----PLHNQEATTITKPSFWEEDMSCLGWLQEQKPNSVIYISFGSWV 284 (448)
T ss_pred EcChhhhC--HHHHHHHHhhhccccCCCEEEec----CcccccccccCCCccccchHHHHHHHhcCCCCceEEEEecccc
Confidence 99999999 888776643 347899999 99764321 11 123467999999998764
Q ss_pred --------------------------C--------------CCCCeEEecCcchhhhcccccccEEEeeCCchhHHHHHH
Q 035856 192 --------------------------R--------------TSGRGKIVLQAPQTQVLGHFSIGVFVIHSGANSVCESIA 231 (278)
Q Consensus 192 --------------------------~--------------~~~~~~v~~w~pq~~iL~~~~v~~fitHgG~~s~~eal~ 231 (278)
+ .++|+++++|+||.+||+|+++|+||||||||||+||++
T Consensus 285 ~~~~~~~~~~l~~~l~~~g~~fiW~~~~~~~~~l~~~~~~~~~~~~~v~~w~PQ~~iL~h~~v~~fvtH~G~nS~~Eal~ 364 (448)
T PLN02562 285 SPIGESNVRTLALALEASGRPFIWVLNPVWREGLPPGYVERVSKQGKVVSWAPQLEVLKHQAVGCYLTHCGWNSTMEAIQ 364 (448)
T ss_pred cCCCHHHHHHHHHHHHHCCCCEEEEEcCCchhhCCHHHHHHhccCEEEEecCCHHHHhCCCccceEEecCcchhHHHHHH
Confidence 1 246888899999999999999999999999999999999
Q ss_pred hCcceeeccccCChhHHHHHHHHHhcceEEecCCCcCHHHHHhhhhC
Q 035856 232 NGVLMICRPFYGDHRMNARMVEEVWGIGVKVEGILLTKSGVLQSLDL 278 (278)
Q Consensus 232 ~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~~~~l~~~i~~ 278 (278)
+|||||+||+++||+.||+++++.||+|++++ .+++++|+++|++
T Consensus 365 ~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~--~~~~~~l~~~v~~ 409 (448)
T PLN02562 365 CQKRLLCYPVAGDQFVNCAYIVDVWKIGVRIS--GFGQKEVEEGLRK 409 (448)
T ss_pred cCCCEEeCCcccchHHHHHHHHHHhCceeEeC--CCCHHHHHHHHHH
Confidence 99999999999999999999998789999995 4799999999863
No 16
>PLN02210 UDP-glucosyl transferase
Probab=100.00 E-value=8.4e-47 Score=341.66 Aligned_cols=257 Identities=22% Similarity=0.397 Sum_probs=193.6
Q ss_pred CceEEecCCCCCCCCCCCCCCcHHHHHHHHHHchHHHHHHHHHHHHcCCCCccEEEeCCCchhHHHHHHHcCCCeEeEeC
Q 035856 6 NIRVYDVEDGVPMKYASTESNPLEAVELFVKATPENFKKGLDAAVSKTGRKISCFLTDAFLTFSGEMARDMHIPWFPVFV 85 (278)
Q Consensus 6 ~i~~~~i~~glp~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~d~vI~D~~~~~~~~vA~~lgIP~v~~~~ 85 (278)
.+++..+|||+|++.+ .+...++..+ .+.+.+.+++++++. ++||||+|.+++|+.++|+++|||++.|++
T Consensus 62 ~~~~~~~~~glp~~~~---~~~~~~~~~~----~~~~~~~l~~~l~~~--~~~~vI~D~~~~w~~~vA~~lgIP~~~f~~ 132 (456)
T PLN02210 62 PVDLVFFSDGLPKDDP---RAPETLLKSL----NKVGAKNLSKIIEEK--RYSCIISSPFTPWVPAVAAAHNIPCAILWI 132 (456)
T ss_pred ceEEEECCCCCCCCcc---cCHHHHHHHH----HHhhhHHHHHHHhcC--CCcEEEECCcchhHHHHHHHhCCCEEEEec
Confidence 5888889999998753 2333333333 334456667766654 799999999999999999999999999999
Q ss_pred Chhhhhhhhhcchh----h---hh--h--hccC-------Ccch--------HHHHHHHHHhcccCCCcEEEecchHhhh
Q 035856 86 AMPYNGSAHIHTDL----I---HQ--F--FINN-------CEES--------LFSSMLSKLGGVLPQASAAVMNFYQELY 139 (278)
Q Consensus 86 ~~~~~~~~~~~~~~----l---~~--~--~~~~-------~~~~--------~~~~~~~~~~~~~~~~~~~l~nt~~~le 139 (278)
.++.....+++... + .+ . ..|+ +.+. .+.....+.......++++++|||.+||
T Consensus 133 ~sa~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pgl~~~~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE 212 (456)
T PLN02210 133 QACGAYSVYYRYYMKTNSFPDLEDLNQTVELPALPLLEVRDLPSFMLPSGGAHFNNLMAEFADCLRYVKWVLVNSFYELE 212 (456)
T ss_pred ccHHHHHHHHhhhhccCCCCcccccCCeeeCCCCCCCChhhCChhhhcCCchHHHHHHHHHHHhcccCCEEEEeCHHHHh
Confidence 98877666543211 0 00 0 0122 1111 1112222333455678999999999999
Q ss_pred ccchhhHHHhhcCCeEEEecCCCCCCCCC----C-CCC--------CCCcchhhhHhhhcCCCCC---------------
Q 035856 140 CSSQLTNDLNSKVPSLLKVGFLTQPLPPP----P-LPP--------SDSDETGYLQWLDRQKPKS--------------- 191 (278)
Q Consensus 140 ~~~~~~~~~~~~~~~v~~VG~~~~pl~~~----~-~~~--------~~~~~~~~~~wld~~~~~s--------------- 191 (278)
+++++.+++ .+++++|| |+++. . ... ...++..|++|||+++++|
T Consensus 213 --~~~~~~l~~-~~~v~~VG----Pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wld~~~~~svvyvsfGS~~~~~~~ 285 (456)
T PLN02210 213 --SEIIESMAD-LKPVIPIG----PLVSPFLLGDDEEETLDGKNLDMCKSDDCCMEWLDKQARSSVVYISFGSMLESLEN 285 (456)
T ss_pred --HHHHHHHhh-cCCEEEEc----ccCchhhcCcccccccccccccccccchHHHHHHhCCCCCceEEEEecccccCCHH
Confidence 999998877 36899999 99742 1 100 0123467999999998765
Q ss_pred --------------------C--------------C-CCCeEEecCcchhhhcccccccEEEeeCCchhHHHHHHhCcce
Q 035856 192 --------------------R--------------T-SGRGKIVLQAPQTQVLGHFSIGVFVIHSGANSVCESIANGVLM 236 (278)
Q Consensus 192 --------------------~--------------~-~~~~~v~~w~pq~~iL~~~~v~~fitHgG~~s~~eal~~GvP~ 236 (278)
+ . +++|++++|+||.+||+|++||+|||||||||++||+++||||
T Consensus 286 ~~~e~a~~l~~~~~~flw~~~~~~~~~~~~~~~~~~~~~~g~v~~w~PQ~~iL~h~~vg~FitH~G~nS~~Eai~~GVP~ 365 (456)
T PLN02210 286 QVETIAKALKNRGVPFLWVIRPKEKAQNVQVLQEMVKEGQGVVLEWSPQEKILSHMAISCFVTHCGWNSTIETVVAGVPV 365 (456)
T ss_pred HHHHHHHHHHhCCCCEEEEEeCCccccchhhHHhhccCCCeEEEecCCHHHHhcCcCcCeEEeeCCcccHHHHHHcCCCE
Confidence 1 1 3778888999999999999999999999999999999999999
Q ss_pred eeccccCChhHHHHHHHHHhcceEEecC----CCcCHHHHHhhhhC
Q 035856 237 ICRPFYGDHRMNARMVEEVWGIGVKVEG----ILLTKSGVLQSLDL 278 (278)
Q Consensus 237 l~~P~~~DQ~~na~~~~~~~g~G~~l~~----~~~~~~~l~~~i~~ 278 (278)
|+||+++||+.||+++++.||+|++++. +.+++++|+++|++
T Consensus 366 v~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~~~~~~~~l~~av~~ 411 (456)
T PLN02210 366 VAYPSWTDQPIDARLLVDVFGIGVRMRNDAVDGELKVEEVERCIEA 411 (456)
T ss_pred EecccccccHHHHHHHHHHhCeEEEEeccccCCcCCHHHHHHHHHH
Confidence 9999999999999999997799999953 46899999999874
No 17
>PLN03015 UDP-glucosyl transferase
Probab=100.00 E-value=2.1e-46 Score=337.14 Aligned_cols=261 Identities=21% Similarity=0.316 Sum_probs=187.9
Q ss_pred CceEEecCCCCCCCCCCCCCCcHHHHHHHHHHchHHHHHHHHHHHHcCCCCccEEEeCCCchhHHHHHHHcCCC-eEeEe
Q 035856 6 NIRVYDVEDGVPMKYASTESNPLEAVELFVKATPENFKKGLDAAVSKTGRKISCFLTDAFLTFSGEMARDMHIP-WFPVF 84 (278)
Q Consensus 6 ~i~~~~i~~glp~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~d~vI~D~~~~~~~~vA~~lgIP-~v~~~ 84 (278)
+|+|+.+|++..++....+.+....+.... ..+++.+++++++...+++|||+|.+++|+.++|+++||| +++|+
T Consensus 61 ~i~~~~lp~~~~~~l~~~~~~~~~~~~~~~----~~~~~~~~~~l~~l~~~~~ciV~D~f~~w~~~vA~~lgIP~~~~f~ 136 (470)
T PLN03015 61 TCQITEIPSVDVDNLVEPDATIFTKMVVKM----RAMKPAVRDAVKSMKRKPTVMIVDFFGTALMSIADDVGVTAKYVYI 136 (470)
T ss_pred ceEEEECCCCccccCCCCCccHHHHHHHHH----HhchHHHHHHHHhcCCCCeEEEEcCCcHHHHHHHHHcCCCEEEEEc
Confidence 599999996543332111112221222222 2355556666554434789999999999999999999999 58888
Q ss_pred CChhhhhhhhhcchhhh-----------hhh-ccC-------Ccch-------HHHHHHHHHhcccCCCcEEEecchHhh
Q 035856 85 VAMPYNGSAHIHTDLIH-----------QFF-INN-------CEES-------LFSSMLSKLGGVLPQASAAVMNFYQEL 138 (278)
Q Consensus 85 ~~~~~~~~~~~~~~~l~-----------~~~-~~~-------~~~~-------~~~~~~~~~~~~~~~~~~~l~nt~~~l 138 (278)
+++++....+++.+... +.+ +|| +.+. .......+......+++++++|||++|
T Consensus 137 ~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~vPg~p~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~a~gvlvNTf~eL 216 (470)
T PLN03015 137 PSHAWFLAVMVYLPVLDTVVEGEYVDIKEPLKIPGCKPVGPKELMETMLDRSDQQYKECVRSGLEVPMSDGVLVNTWEEL 216 (470)
T ss_pred CHHHHHHHHHHhhhhhhcccccccCCCCCeeeCCCCCCCChHHCCHhhcCCCcHHHHHHHHHHHhcccCCEEEEechHHH
Confidence 88887766655432211 001 232 1111 111222233345788999999999999
Q ss_pred hccchhhHHHhhc-------CCeEEEecCCCCCCCCCCCCCCCCcchhhhHhhhcCCCCC--------------------
Q 035856 139 YCSSQLTNDLNSK-------VPSLLKVGFLTQPLPPPPLPPSDSDETGYLQWLDRQKPKS-------------------- 191 (278)
Q Consensus 139 e~~~~~~~~~~~~-------~~~v~~VG~~~~pl~~~~~~~~~~~~~~~~~wld~~~~~s-------------------- 191 (278)
| +++++.+++. .+++|+|| |++..... .+++.+|++|||+++++|
T Consensus 217 E--~~~~~~l~~~~~~~~~~~~~v~~VG----Pl~~~~~~--~~~~~~~~~WLd~~~~~sVvyvsFGS~~~~~~~q~~el 288 (470)
T PLN03015 217 Q--GNTLAALREDMELNRVMKVPVYPIG----PIVRTNVH--VEKRNSIFEWLDKQGERSVVYVCLGSGGTLTFEQTVEL 288 (470)
T ss_pred h--HHHHHHHHhhcccccccCCceEEec----CCCCCccc--ccchHHHHHHHHhCCCCCEEEEECCcCCcCCHHHHHHH
Confidence 9 9999988764 25799999 99743211 122347999999998876
Q ss_pred ---------------CCC---------------------------CCeEEe-cCcchhhhcccccccEEEeeCCchhHHH
Q 035856 192 ---------------RTS---------------------------GRGKIV-LQAPQTQVLGHFSIGVFVIHSGANSVCE 228 (278)
Q Consensus 192 ---------------~~~---------------------------~~~~v~-~w~pq~~iL~~~~v~~fitHgG~~s~~e 228 (278)
+.+ ++|+++ +|+||.+||+|++||+|||||||||++|
T Consensus 289 a~gl~~s~~~FlWv~r~~~~~~~~~~~~~~~~~~~lp~~f~er~~~rGl~v~~W~PQ~~vL~h~~vg~fvtH~GwnS~~E 368 (470)
T PLN03015 289 AWGLELSGQRFVWVLRRPASYLGASSSDDDQVSASLPEGFLDRTRGVGLVVTQWAPQVEILSHRSIGGFLSHCGWSSVLE 368 (470)
T ss_pred HHHHHhCCCcEEEEEecCccccccccccccchhhcCChHHHHhhccCceEEEecCCHHHHhccCccCeEEecCCchhHHH
Confidence 210 123554 9999999999999999999999999999
Q ss_pred HHHhCcceeeccccCChhHHHHHHHHHhcceEEec----CCCcCHHHHHhhhhC
Q 035856 229 SIANGVLMICRPFYGDHRMNARMVEEVWGIGVKVE----GILLTKSGVLQSLDL 278 (278)
Q Consensus 229 al~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l~----~~~~~~~~l~~~i~~ 278 (278)
|+++|||||+||+++||+.||+++++.||+|+++. .+.+++++|+++|++
T Consensus 369 ai~~GvP~v~~P~~~DQ~~na~~~~~~~gvg~~~~~~~~~~~v~~e~i~~~v~~ 422 (470)
T PLN03015 369 SLTKGVPIVAWPLYAEQWMNATLLTEEIGVAVRTSELPSEKVIGREEVASLVRK 422 (470)
T ss_pred HHHcCCCEEecccccchHHHHHHHHHHhCeeEEecccccCCccCHHHHHHHHHH
Confidence 99999999999999999999999988899999995 346899999999874
No 18
>PLN02992 coniferyl-alcohol glucosyltransferase
Probab=100.00 E-value=3.9e-46 Score=336.98 Aligned_cols=257 Identities=20% Similarity=0.332 Sum_probs=188.2
Q ss_pred CceEEecCC----CCCCCCCCCCCCcHHHHHHHHHHchHHHHHHHHHHHHcCCCCccEEEeCCCchhHHHHHHHcCCCeE
Q 035856 6 NIRVYDVED----GVPMKYASTESNPLEAVELFVKATPENFKKGLDAAVSKTGRKISCFLTDAFLTFSGEMARDMHIPWF 81 (278)
Q Consensus 6 ~i~~~~i~~----glp~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~d~vI~D~~~~~~~~vA~~lgIP~v 81 (278)
+|+++.+|+ |||+..+ +....+....+ .+.+.+++++++.+.+|+|||+|.+++|+.++|+++|||++
T Consensus 58 ~i~~~~lp~p~~~glp~~~~----~~~~~~~~~~~----~~~~~~~~~l~~~~~~p~cvV~D~f~~Wa~dVA~elgIP~v 129 (481)
T PLN02992 58 GVDIVGLPSPDISGLVDPSA----HVVTKIGVIMR----EAVPTLRSKIAEMHQKPTALIVDLFGTDALCLGGEFNMLTY 129 (481)
T ss_pred CceEEECCCccccCCCCCCc----cHHHHHHHHHH----HhHHHHHHHHHhcCCCCeEEEECCcchhHHHHHHHcCCCEE
Confidence 699999985 6653211 12222222222 34455555555433578999999999999999999999999
Q ss_pred eEeCChhhhhhhhhcchhhhh-----------hh-ccC-------Ccch-------HHHHHHHHHhcccCCCcEEEecch
Q 035856 82 PVFVAMPYNGSAHIHTDLIHQ-----------FF-INN-------CEES-------LFSSMLSKLGGVLPQASAAVMNFY 135 (278)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~l~~-----------~~-~~~-------~~~~-------~~~~~~~~~~~~~~~~~~~l~nt~ 135 (278)
.|++++++....+.+.+.+.. .+ +|| +.+. .....+.+....+.+++++++|||
T Consensus 130 ~F~t~sA~~~~~~~~~~~~~~~~~~~~~~~~~~~~iPg~~~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~a~gvlvNTf 209 (481)
T PLN02992 130 IFIASNARFLGVSIYYPTLDKDIKEEHTVQRKPLAMPGCEPVRFEDTLDAYLVPDEPVYRDFVRHGLAYPKADGILVNTW 209 (481)
T ss_pred EEecCcHHHHHHHHhhhhhccccccccccCCCCcccCCCCccCHHHhhHhhcCCCcHHHHHHHHHHHhcccCCEEEEech
Confidence 999999987765544322110 00 222 1111 112233344456778999999999
Q ss_pred HhhhccchhhHHHhhc-------CCeEEEecCCCCCCCCCCCCCCCCcchhhhHhhhcCCCCC-----------------
Q 035856 136 QELYCSSQLTNDLNSK-------VPSLLKVGFLTQPLPPPPLPPSDSDETGYLQWLDRQKPKS----------------- 191 (278)
Q Consensus 136 ~~le~~~~~~~~~~~~-------~~~v~~VG~~~~pl~~~~~~~~~~~~~~~~~wld~~~~~s----------------- 191 (278)
++|| +++++++++. .+++|+|| |+...... ..+++.|++|||+++++|
T Consensus 210 ~eLE--~~~l~~l~~~~~~~~~~~~~v~~VG----Pl~~~~~~--~~~~~~c~~wLd~~~~~sVvyvsfGS~~~l~~~q~ 281 (481)
T PLN02992 210 EEME--PKSLKSLQDPKLLGRVARVPVYPIG----PLCRPIQS--SKTDHPVLDWLNKQPNESVLYISFGSGGSLSAKQL 281 (481)
T ss_pred HHHh--HHHHHHHhhccccccccCCceEEec----CccCCcCC--CcchHHHHHHHHcCCCCceEEEeecccccCCHHHH
Confidence 9999 9999988652 15799999 99753221 133567999999998765
Q ss_pred ------------------CCC----------------------------------CCeEEe-cCcchhhhcccccccEEE
Q 035856 192 ------------------RTS----------------------------------GRGKIV-LQAPQTQVLGHFSIGVFV 218 (278)
Q Consensus 192 ------------------~~~----------------------------------~~~~v~-~w~pq~~iL~~~~v~~fi 218 (278)
+.+ ++++++ +|+||.+||+|++||+||
T Consensus 282 ~ela~gL~~s~~~flW~~r~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~f~eR~~~rg~vv~~W~PQ~~iL~h~~vg~Fi 361 (481)
T PLN02992 282 TELAWGLEMSQQRFVWVVRPPVDGSACSAYFSANGGETRDNTPEYLPEGFVSRTHDRGFVVPSWAPQAEILAHQAVGGFL 361 (481)
T ss_pred HHHHHHHHHcCCCEEEEEeCCcccccccccccCcccccccchhhhCCHHHHHHhcCCCEEEeecCCHHHHhCCcccCeeE
Confidence 210 113554 999999999999999999
Q ss_pred eeCCchhHHHHHHhCcceeeccccCChhHHHHHHHHHhcceEEecC--CCcCHHHHHhhhhC
Q 035856 219 IHSGANSVCESIANGVLMICRPFYGDHRMNARMVEEVWGIGVKVEG--ILLTKSGVLQSLDL 278 (278)
Q Consensus 219 tHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l~~--~~~~~~~l~~~i~~ 278 (278)
|||||||++||+++|||||+||+++||+.||+++++.||+|++++. +.+++++|+++|++
T Consensus 362 tH~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~~~~~~~~~l~~av~~ 423 (481)
T PLN02992 362 THCGWSSTLESVVGGVPMIAWPLFAEQNMNAALLSDELGIAVRSDDPKEVISRSKIEALVRK 423 (481)
T ss_pred ecCchhHHHHHHHcCCCEEecCccchhHHHHHHHHHHhCeeEEecCCCCcccHHHHHHHHHH
Confidence 9999999999999999999999999999999999766799999975 46899999999863
No 19
>PLN02448 UDP-glycosyltransferase family protein
Probab=100.00 E-value=4.8e-46 Score=338.31 Aligned_cols=263 Identities=24% Similarity=0.354 Sum_probs=197.1
Q ss_pred CCceEEecCCCCCCCCCCCCCCcHHHHHHHHHHchHHHHHHHHHHHHcCCCCccEEEeCCCchhHHHHHHHcCCCeEeEe
Q 035856 5 DNIRVYDVEDGVPMKYASTESNPLEAVELFVKATPENFKKGLDAAVSKTGRKISCFLTDAFLTFSGEMARDMHIPWFPVF 84 (278)
Q Consensus 5 ~~i~~~~i~~glp~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~d~vI~D~~~~~~~~vA~~lgIP~v~~~ 84 (278)
++|+|+++|+++|++.+.. .+...++..+. ..+.+.+++++++...++||||+|.++.|+.++|+++|||++.|+
T Consensus 62 ~gi~fv~lp~~~p~~~~~~-~~~~~~~~~~~----~~~~~~~~~~l~~~~~~~~~VI~D~~~~wa~~vA~~lgIP~v~f~ 136 (459)
T PLN02448 62 DNIRFATIPNVIPSELVRA-ADFPGFLEAVM----TKMEAPFEQLLDRLEPPVTAIVADTYLFWAVGVGNRRNIPVASLW 136 (459)
T ss_pred CCEEEEECCCCCCCccccc-cCHHHHHHHHH----HHhHHHHHHHHHhcCCCcEEEEECCccHHHHHHHHHhCCCeEEEE
Confidence 4799999999998765433 33333333332 235555666655433478999999999999999999999999999
Q ss_pred CChhhhhhhhhcchhhhh-------------h---hccC-------Ccch-------HHHHHHHHHhcccCCCcEEEecc
Q 035856 85 VAMPYNGSAHIHTDLIHQ-------------F---FINN-------CEES-------LFSSMLSKLGGVLPQASAAVMNF 134 (278)
Q Consensus 85 ~~~~~~~~~~~~~~~l~~-------------~---~~~~-------~~~~-------~~~~~~~~~~~~~~~~~~~l~nt 134 (278)
++++.....+++...+.. . .+|+ +.+. .....+........+++++++||
T Consensus 137 ~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iPg~~~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNT 216 (459)
T PLN02448 137 TMSATFFSVFYHFDLLPQNGHFPVELSESGEERVDYIPGLSSTRLSDLPPIFHGNSRRVLKRILEAFSWVPKAQYLLFTS 216 (459)
T ss_pred hHHHHHHHHHHHhhhhhhccCCCCccccccCCccccCCCCCCCChHHCchhhcCCchHHHHHHHHHHhhcccCCEEEEcc
Confidence 999877665544432110 0 0222 1111 11223334444566789999999
Q ss_pred hHhhhccchhhHHHhhcC-CeEEEecCCCCCCCCCCCC--C-----CCCcchhhhHhhhcCCCCC---------------
Q 035856 135 YQELYCSSQLTNDLNSKV-PSLLKVGFLTQPLPPPPLP--P-----SDSDETGYLQWLDRQKPKS--------------- 191 (278)
Q Consensus 135 ~~~le~~~~~~~~~~~~~-~~v~~VG~~~~pl~~~~~~--~-----~~~~~~~~~~wld~~~~~s--------------- 191 (278)
|++|| +.+++++++.+ +++++|| |+.+.... . ....+.+|..||+.+++++
T Consensus 217 f~eLE--~~~~~~l~~~~~~~~~~iG----P~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~vvyvsfGs~~~~~~~ 290 (459)
T PLN02448 217 FYELE--AQAIDALKSKFPFPVYPIG----PSIPYMELKDNSSSSNNEDNEPDYFQWLDSQPEGSVLYVSLGSFLSVSSA 290 (459)
T ss_pred HHHhh--HHHHHHHHhhcCCceEEec----CcccccccCCCccccccccchhHHHHHHcCCCCCceEEEeecccccCCHH
Confidence 99999 99999998776 4899999 99753211 0 0012247999999988765
Q ss_pred --------------------C---------CCCCeEEecCcchhhhcccccccEEEeeCCchhHHHHHHhCcceeecccc
Q 035856 192 --------------------R---------TSGRGKIVLQAPQTQVLGHFSIGVFVIHSGANSVCESIANGVLMICRPFY 242 (278)
Q Consensus 192 --------------------~---------~~~~~~v~~w~pq~~iL~~~~v~~fitHgG~~s~~eal~~GvP~l~~P~~ 242 (278)
+ .++|+++++|+||.+||+|+++++|||||||||++||+++|||||+||++
T Consensus 291 ~~~~~~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~v~~w~pQ~~iL~h~~v~~fvtHgG~nS~~eal~~GvP~l~~P~~ 370 (459)
T PLN02448 291 QMDEIAAGLRDSGVRFLWVARGEASRLKEICGDMGLVVPWCDQLKVLCHSSVGGFWTHCGWNSTLEAVFAGVPMLTFPLF 370 (459)
T ss_pred HHHHHHHHHHhCCCCEEEEEcCchhhHhHhccCCEEEeccCCHHHHhccCccceEEecCchhHHHHHHHcCCCEEecccc
Confidence 1 23578888999999999999999999999999999999999999999999
Q ss_pred CChhHHHHHHHHHhcceEEecC-----CCcCHHHHHhhhhC
Q 035856 243 GDHRMNARMVEEVWGIGVKVEG-----ILLTKSGVLQSLDL 278 (278)
Q Consensus 243 ~DQ~~na~~~~~~~g~G~~l~~-----~~~~~~~l~~~i~~ 278 (278)
+||+.||+++++.||+|+.+.. +.+++++|+++|++
T Consensus 371 ~DQ~~na~~v~~~~g~G~~~~~~~~~~~~~~~~~l~~av~~ 411 (459)
T PLN02448 371 WDQPLNSKLIVEDWKIGWRVKREVGEETLVGREEIAELVKR 411 (459)
T ss_pred ccchhhHHHHHHHhCceEEEecccccCCcCcHHHHHHHHHH
Confidence 9999999999998899999852 35799999999874
No 20
>PLN02554 UDP-glycosyltransferase family protein
Probab=100.00 E-value=5.3e-46 Score=339.35 Aligned_cols=261 Identities=23% Similarity=0.376 Sum_probs=193.6
Q ss_pred CceEEecCCCCCCCCCCCCCCcHHHHHHHHHHchHHHHHHHHHHHHcC----CCCccEEEeCCCchhHHHHHHHcCCCeE
Q 035856 6 NIRVYDVEDGVPMKYASTESNPLEAVELFVKATPENFKKGLDAAVSKT----GRKISCFLTDAFLTFSGEMARDMHIPWF 81 (278)
Q Consensus 6 ~i~~~~i~~glp~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~----~~~~d~vI~D~~~~~~~~vA~~lgIP~v 81 (278)
+|+|+.||++.++.. .+. .+..+.+...+.+++.+++++++. +++++|||+|++++|+.++|+++|||++
T Consensus 64 ~i~~~~lp~~~~~~~----~~~--~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~pv~cvV~D~f~~wa~dvA~~lgIP~~ 137 (481)
T PLN02554 64 RLRYEVISAGDQPTT----EDP--TFQSYIDNQKPKVRDAVAKLVDDSSTPSSPRLAGFVVDMFCTSMIDVANEFGVPSY 137 (481)
T ss_pred CeEEEEcCCCCCCcc----cch--HHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEECCcchhHHHHHHHhCCCEE
Confidence 699999998875321 111 222233455667778888776431 1345999999999999999999999999
Q ss_pred eEeCChhhhhhhhhcchhhh-----------hh---h-ccC--------Ccch-----HHHHHHHHHhcccCCCcEEEec
Q 035856 82 PVFVAMPYNGSAHIHTDLIH-----------QF---F-INN--------CEES-----LFSSMLSKLGGVLPQASAAVMN 133 (278)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~l~-----------~~---~-~~~--------~~~~-----~~~~~~~~~~~~~~~~~~~l~n 133 (278)
.|++++++....+++.+... +. + +|+ +.+. .+.....+....+.+++++++|
T Consensus 138 ~F~t~sa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~iPgl~~pl~~~dlp~~~~~~~~~~~~~~~~~~~~~~~gvlvN 217 (481)
T PLN02554 138 MFYTSNATFLGLQLHVQMLYDEKKYDVSELEDSEVELDVPSLTRPYPVKCLPSVLLSKEWLPLFLAQARRFREMKGILVN 217 (481)
T ss_pred EEeCCcHHHHHHHHhhhhhccccccCccccCCCCceeECCCCCCCCCHHHCCCcccCHHHHHHHHHHHHhcccCCEEEEe
Confidence 99999999887776543211 00 0 222 1111 1122333444567789999999
Q ss_pred chHhhhccchhhHHHhh---cCCeEEEecCCCCCCCCCCCC-CC--CCcchhhhHhhhcCCCCC----------------
Q 035856 134 FYQELYCSSQLTNDLNS---KVPSLLKVGFLTQPLPPPPLP-PS--DSDETGYLQWLDRQKPKS---------------- 191 (278)
Q Consensus 134 t~~~le~~~~~~~~~~~---~~~~v~~VG~~~~pl~~~~~~-~~--~~~~~~~~~wld~~~~~s---------------- 191 (278)
||.+|| +.+...+++ ..|++++|| |+...... .. .....+|.+|||+++++|
T Consensus 218 t~~eLe--~~~~~~l~~~~~~~~~v~~vG----pl~~~~~~~~~~~~~~~~~~~~wLd~~~~~svvyvsfGS~~~~~~~~ 291 (481)
T PLN02554 218 TVAELE--PQALKFFSGSSGDLPPVYPVG----PVLHLENSGDDSKDEKQSEILRWLDEQPPKSVVFLCFGSMGGFSEEQ 291 (481)
T ss_pred chHHHh--HHHHHHHHhcccCCCCEEEeC----CCccccccccccccccchHHHHHHhcCCCCcEEEEeccccccCCHHH
Confidence 999999 998888875 347899999 99432211 11 122357999999998764
Q ss_pred -------------------CC----------------------------CCCeEEecCcchhhhcccccccEEEeeCCch
Q 035856 192 -------------------RT----------------------------SGRGKIVLQAPQTQVLGHFSIGVFVIHSGAN 224 (278)
Q Consensus 192 -------------------~~----------------------------~~~~~v~~w~pq~~iL~~~~v~~fitHgG~~ 224 (278)
+. ++|+++++|+||.+||+|+++++||||||||
T Consensus 292 ~~~la~~l~~~~~~flW~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~r~~~~g~v~~W~PQ~~iL~H~~v~~FvtH~G~n 371 (481)
T PLN02554 292 AREIAIALERSGHRFLWSLRRASPNIMKEPPGEFTNLEEILPEGFLDRTKDIGKVIGWAPQVAVLAKPAIGGFVTHCGWN 371 (481)
T ss_pred HHHHHHHHHHcCCCeEEEEcCCcccccccccccccchhhhCChHHHHHhccCceEEeeCCHHHHhCCcccCcccccCccc
Confidence 21 1356778999999999999999999999999
Q ss_pred hHHHHHHhCcceeeccccCChhHHHHHHHHHhcceEEecC-----------CCcCHHHHHhhhhC
Q 035856 225 SVCESIANGVLMICRPFYGDHRMNARMVEEVWGIGVKVEG-----------ILLTKSGVLQSLDL 278 (278)
Q Consensus 225 s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l~~-----------~~~~~~~l~~~i~~ 278 (278)
|++||+++|||||+||+++||+.||+++++.||+|++++. +.+++++|+++|++
T Consensus 372 S~~Ea~~~GVP~l~~P~~~DQ~~Na~~~v~~~g~Gv~l~~~~~~~~~~~~~~~~~~e~l~~av~~ 436 (481)
T PLN02554 372 SILESLWFGVPMAAWPLYAEQKFNAFEMVEELGLAVEIRKYWRGDLLAGEMETVTAEEIERGIRC 436 (481)
T ss_pred hHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEeeccccccccccccCeEcHHHHHHHHHH
Confidence 9999999999999999999999999776665799999953 46899999999874
No 21
>PLN03007 UDP-glucosyltransferase family protein
Probab=100.00 E-value=1e-44 Score=331.18 Aligned_cols=264 Identities=25% Similarity=0.401 Sum_probs=195.7
Q ss_pred CceEEecC---CCCCCCCCCCCC-------CcHHHHHHHHHHchHHHHHHHHHHHHcCCCCccEEEeCCCchhHHHHHHH
Q 035856 6 NIRVYDVE---DGVPMKYASTES-------NPLEAVELFVKATPENFKKGLDAAVSKTGRKISCFLTDAFLTFSGEMARD 75 (278)
Q Consensus 6 ~i~~~~i~---~glp~~~~~~~~-------~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~d~vI~D~~~~~~~~vA~~ 75 (278)
.+.+.++| +|+|++.++... ++..+...+. ...+.+.+.+++++++. ++||||+|.+++|+..+|++
T Consensus 65 ~~~~~~~p~~~~glP~g~e~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~l~~~l~~~--~~~~IV~D~~~~w~~~vA~~ 141 (482)
T PLN03007 65 DIQIFNFPCVELGLPEGCENVDFITSNNNDDSGDLFLKFL-FSTKYFKDQLEKLLETT--RPDCLVADMFFPWATEAAEK 141 (482)
T ss_pred eEEEeeCCCCcCCCCCCcccccccccccccchHHHHHHHH-HHHHHHHHHHHHHHhcC--CCCEEEECCcchhHHHHHHH
Confidence 45556666 689988765421 1224444454 44567888888888764 79999999999999999999
Q ss_pred cCCCeEeEeCChhhhhhhhhcchh------hhh---hh-ccCC---------------cchHHHHHHHHHhcccCCCcEE
Q 035856 76 MHIPWFPVFVAMPYNGSAHIHTDL------IHQ---FF-INNC---------------EESLFSSMLSKLGGVLPQASAA 130 (278)
Q Consensus 76 lgIP~v~~~~~~~~~~~~~~~~~~------l~~---~~-~~~~---------------~~~~~~~~~~~~~~~~~~~~~~ 130 (278)
+|||+++|++++++....+++... ... .+ .|+- ....+............+++++
T Consensus 142 lgIP~v~f~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 221 (482)
T PLN03007 142 FGVPRLVFHGTGYFSLCASYCIRVHKPQKKVASSSEPFVIPDLPGDIVITEEQINDADEESPMGKFMKEVRESEVKSFGV 221 (482)
T ss_pred hCCCeEEeecccHHHHHHHHHHHhcccccccCCCCceeeCCCCCCccccCHHhcCCCCCchhHHHHHHHHHhhcccCCEE
Confidence 999999999999877655432111 000 00 1211 1112334444555567889999
Q ss_pred EecchHhhhccchhhHHHhhcC-CeEEEecCCCCCCCCCCCC---------CCCCcchhhhHhhhcCCCCC---------
Q 035856 131 VMNFYQELYCSSQLTNDLNSKV-PSLLKVGFLTQPLPPPPLP---------PSDSDETGYLQWLDRQKPKS--------- 191 (278)
Q Consensus 131 l~nt~~~le~~~~~~~~~~~~~-~~v~~VG~~~~pl~~~~~~---------~~~~~~~~~~~wld~~~~~s--------- 191 (278)
++|||.+|| +++.+.+++.. +++++|| |+...... ....++..|+.|||+++++|
T Consensus 222 l~Nt~~~le--~~~~~~~~~~~~~~~~~VG----Pl~~~~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~svvyvsfGS~ 295 (482)
T PLN03007 222 LVNSFYELE--SAYADFYKSFVAKRAWHIG----PLSLYNRGFEEKAERGKKANIDEQECLKWLDSKKPDSVIYLSFGSV 295 (482)
T ss_pred EEECHHHHH--HHHHHHHHhccCCCEEEEc----cccccccccccccccCCccccchhHHHHHHhcCCCCceEEEeecCC
Confidence 999999999 98888887766 5799999 98643211 01112467999999998765
Q ss_pred --------------------------C-----------CC--------CCe-EEecCcchhhhcccccccEEEeeCCchh
Q 035856 192 --------------------------R-----------TS--------GRG-KIVLQAPQTQVLGHFSIGVFVIHSGANS 225 (278)
Q Consensus 192 --------------------------~-----------~~--------~~~-~v~~w~pq~~iL~~~~v~~fitHgG~~s 225 (278)
+ .+ +++ ++.+|+||.+||+|++|++|||||||||
T Consensus 296 ~~~~~~~~~~~~~~l~~~~~~flw~~~~~~~~~~~~~~lp~~~~~r~~~~g~~v~~w~PQ~~iL~h~~v~~fvtH~G~nS 375 (482)
T PLN03007 296 ASFKNEQLFEIAAGLEGSGQNFIWVVRKNENQGEKEEWLPEGFEERTKGKGLIIRGWAPQVLILDHQATGGFVTHCGWNS 375 (482)
T ss_pred cCCCHHHHHHHHHHHHHCCCCEEEEEecCCcccchhhcCCHHHHHHhccCCEEEecCCCHHHHhccCccceeeecCcchH
Confidence 1 11 223 4459999999999999999999999999
Q ss_pred HHHHHHhCcceeeccccCChhHHHHHHHHHhcceEEec--------CCCcCHHHHHhhhhC
Q 035856 226 VCESIANGVLMICRPFYGDHRMNARMVEEVWGIGVKVE--------GILLTKSGVLQSLDL 278 (278)
Q Consensus 226 ~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l~--------~~~~~~~~l~~~i~~ 278 (278)
++||+++|||||+||+++||+.||+++++.|++|+.+. .+.+++++|+++|++
T Consensus 376 ~~Eal~~GVP~v~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~l~~av~~ 436 (482)
T PLN03007 376 LLEGVAAGLPMVTWPVGAEQFYNEKLVTQVLRTGVSVGAKKLVKVKGDFISREKVEKAVRE 436 (482)
T ss_pred HHHHHHcCCCeeeccchhhhhhhHHHHHHhhcceeEeccccccccccCcccHHHHHHHHHH
Confidence 99999999999999999999999999998888888863 356899999999874
No 22
>PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional
Probab=99.97 E-value=1.6e-31 Score=245.11 Aligned_cols=219 Identities=16% Similarity=0.195 Sum_probs=155.5
Q ss_pred HHHHHcCCCCccEEEeCCCchhHHHHHHHc-CCCeEeEeCChhhhhh-hhhc--------chhh----------hhhhcc
Q 035856 47 DAAVSKTGRKISCFLTDAFLTFSGEMARDM-HIPWFPVFVAMPYNGS-AHIH--------TDLI----------HQFFIN 106 (278)
Q Consensus 47 ~~l~~~~~~~~d~vI~D~~~~~~~~vA~~l-gIP~v~~~~~~~~~~~-~~~~--------~~~l----------~~~~~~ 106 (278)
.++++....++|++|+|.+..++..+|+++ ++|.|.+++....... .... .+.. .+++.|
T Consensus 127 ~~~L~~~~~kFDlvi~e~~~~c~~~la~~~~~~p~i~~ss~~~~~~~~~~~gg~p~~~syvP~~~~~~~~~Msf~~R~~N 206 (507)
T PHA03392 127 KNLIANKNNKFDLLVTEAFLDYPLVFSHLFGDAPVIQISSGYGLAENFETMGAVSRHPVYYPNLWRSKFGNLNVWETINE 206 (507)
T ss_pred HHHHhcCCCceeEEEecccchhHHHHHHHhCCCCEEEEcCCCCchhHHHhhccCCCCCeeeCCcccCCCCCCCHHHHHHH
Confidence 444441124799999999999999999999 9998887774432111 1000 0000 111100
Q ss_pred C-----------CcchHHHHHHHHH--------hcccCCCcEEEecchHhhhccchhhHHHhhcCCeEEEecCCCCCCCC
Q 035856 107 N-----------CEESLFSSMLSKL--------GGVLPQASAAVMNFYQELYCSSQLTNDLNSKVPSLLKVGFLTQPLPP 167 (278)
Q Consensus 107 ~-----------~~~~~~~~~~~~~--------~~~~~~~~~~l~nt~~~le~~~~~~~~~~~~~~~v~~VG~~~~pl~~ 167 (278)
- .......+...+. .+..++++.+++|+...+| +.++..|++.+|| |++.
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~l~~~~f~~~~~~~~~l~~~~~l~lvns~~~~d-------~~rp~~p~v~~vG----gi~~ 275 (507)
T PHA03392 207 IYTELRLYNEFSLLADEQNKLLKQQFGPDTPTIRELRNRVQLLFVNVHPVFD-------NNRPVPPSVQYLG----GLHL 275 (507)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHcCCCCCCHHHHHhCCcEEEEecCcccc-------CCCCCCCCeeeec----cccc
Confidence 0 0000001111111 1234567899999998888 6677779999999 9876
Q ss_pred CCCCCCCCcchhhhHhhhcCCCCC--------------------------------------------CCCCCeEEecCc
Q 035856 168 PPLPPSDSDETGYLQWLDRQKPKS--------------------------------------------RTSGRGKIVLQA 203 (278)
Q Consensus 168 ~~~~~~~~~~~~~~~wld~~~~~s--------------------------------------------~~~~~~~v~~w~ 203 (278)
..... ...+.++.+|+++.+.+. ..++|.++.+|+
T Consensus 276 ~~~~~-~~l~~~l~~fl~~~~~g~V~vS~GS~~~~~~~~~~~~~~~l~a~~~l~~~viw~~~~~~~~~~~p~Nv~i~~w~ 354 (507)
T PHA03392 276 HKKPP-QPLDDYLEEFLNNSTNGVVYVSFGSSIDTNDMDNEFLQMLLRTFKKLPYNVLWKYDGEVEAINLPANVLTQKWF 354 (507)
T ss_pred CCCCC-CCCCHHHHHHHhcCCCcEEEEECCCCCcCCCCCHHHHHHHHHHHHhCCCeEEEEECCCcCcccCCCceEEecCC
Confidence 32111 122345677887754321 134788889999
Q ss_pred chhhhcccccccEEEeeCCchhHHHHHHhCcceeeccccCChhHHHHHHHHHhcceEEecCCCcCHHHHHhhhhC
Q 035856 204 PQTQVLGHFSIGVFVIHSGANSVCESIANGVLMICRPFYGDHRMNARMVEEVWGIGVKVEGILLTKSGVLQSLDL 278 (278)
Q Consensus 204 pq~~iL~~~~v~~fitHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~~~~l~~~i~~ 278 (278)
||.+||+|+++++||||||+||+.||+++|||+|++|+++||+.||+|+++. |+|+.++...+++++|+++|++
T Consensus 355 Pq~~lL~hp~v~~fItHGG~~s~~Eal~~GvP~v~iP~~~DQ~~Na~rv~~~-G~G~~l~~~~~t~~~l~~ai~~ 428 (507)
T PHA03392 355 PQRAVLKHKNVKAFVTQGGVQSTDEAIDALVPMVGLPMMGDQFYNTNKYVEL-GIGRALDTVTVSAAQLVLAIVD 428 (507)
T ss_pred CHHHHhcCCCCCEEEecCCcccHHHHHHcCCCEEECCCCccHHHHHHHHHHc-CcEEEeccCCcCHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999998 9999999888999999999863
No 23
>PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule. This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A ....
Probab=99.97 E-value=1.4e-33 Score=260.80 Aligned_cols=125 Identities=30% Similarity=0.430 Sum_probs=92.6
Q ss_pred HHHhhcCCeEEEecCCCCCCCCCCCCCCCCcchhhhHhhhcC-CCC-------C--------------------------
Q 035856 146 NDLNSKVPSLLKVGFLTQPLPPPPLPPSDSDETGYLQWLDRQ-KPK-------S-------------------------- 191 (278)
Q Consensus 146 ~~~~~~~~~v~~VG~~~~pl~~~~~~~~~~~~~~~~~wld~~-~~~-------s-------------------------- 191 (278)
+++++..|++.+|| +++.....+ ...++..|+++. +.+ |
T Consensus 239 d~prp~~p~v~~vG----gl~~~~~~~---l~~~~~~~~~~~~~~~vv~vsfGs~~~~~~~~~~~~~~~~~~~~~~~~iW 311 (500)
T PF00201_consen 239 DFPRPLLPNVVEVG----GLHIKPAKP---LPEELWNFLDSSGKKGVVYVSFGSIVSSMPEEKLKEIAEAFENLPQRFIW 311 (500)
T ss_dssp ---HHHHCTSTTGC----GC-S----T---CHHHHHHHTSTTTTTEEEEEE-TSSSTT-HHHHHHHHHHHHHCSTTEEEE
T ss_pred cCCcchhhcccccC----ccccccccc---cccccchhhhccCCCCEEEEecCcccchhHHHHHHHHHHHHhhCCCcccc
Confidence 47777778899999 987643322 123455677652 221 1
Q ss_pred --------CCCCCeEEecCcchhhhcccccccEEEeeCCchhHHHHHHhCcceeeccccCChhHHHHHHHHHhcceEEec
Q 035856 192 --------RTSGRGKIVLQAPQTQVLGHFSIGVFVIHSGANSVCESIANGVLMICRPFYGDHRMNARMVEEVWGIGVKVE 263 (278)
Q Consensus 192 --------~~~~~~~v~~w~pq~~iL~~~~v~~fitHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l~ 263 (278)
..++|.++.+|+||.+||+|+++++|||||||||++||+++|||||++|+++||+.||+++++. |+|+.++
T Consensus 312 ~~~~~~~~~l~~n~~~~~W~PQ~~lL~hp~v~~fitHgG~~s~~Ea~~~gvP~l~~P~~~DQ~~na~~~~~~-G~g~~l~ 390 (500)
T PF00201_consen 312 KYEGEPPENLPKNVLIVKWLPQNDLLAHPRVKLFITHGGLNSTQEALYHGVPMLGIPLFGDQPRNAARVEEK-GVGVVLD 390 (500)
T ss_dssp EETCSHGCHHHTTEEEESS--HHHHHTSTTEEEEEES--HHHHHHHHHCT--EEE-GCSTTHHHHHHHHHHT-TSEEEEG
T ss_pred cccccccccccceEEEeccccchhhhhcccceeeeeccccchhhhhhhccCCccCCCCcccCCccceEEEEE-eeEEEEE
Confidence 2357889999999999999999999999999999999999999999999999999999999999 9999999
Q ss_pred CCCcCHHHHHhhhhC
Q 035856 264 GILLTKSGVLQSLDL 278 (278)
Q Consensus 264 ~~~~~~~~l~~~i~~ 278 (278)
...+|+++|.++|++
T Consensus 391 ~~~~~~~~l~~ai~~ 405 (500)
T PF00201_consen 391 KNDLTEEELRAAIRE 405 (500)
T ss_dssp GGC-SHHHHHHHHHH
T ss_pred ecCCcHHHHHHHHHH
Confidence 889999999999874
No 24
>KOG1192 consensus UDP-glucuronosyl and UDP-glucosyl transferase [Carbohydrate transport and metabolism; Energy production and conversion]
Probab=99.96 E-value=6.9e-30 Score=235.96 Aligned_cols=226 Identities=26% Similarity=0.320 Sum_probs=143.8
Q ss_pred HHHHHHHchHHHHHHHHHHHHcCCCCccEEEeCCCchhHHHHHHHcC-CCeEeEeCChhhhhhhhhcchhh--hhhh--c
Q 035856 31 VELFVKATPENFKKGLDAAVSKTGRKISCFLTDAFLTFSGEMARDMH-IPWFPVFVAMPYNGSAHIHTDLI--HQFF--I 105 (278)
Q Consensus 31 ~~~~~~~~~~~l~~~l~~l~~~~~~~~d~vI~D~~~~~~~~vA~~lg-IP~v~~~~~~~~~~~~~~~~~~l--~~~~--~ 105 (278)
...+...+...+++.+..+......++||+|+|.+..|...+|.+.+ |+..++.+.++.......+.+.. .... .
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~g~~~~~~~~p~~~~~~ 168 (496)
T KOG1192|consen 89 LLELNKTCEDLLRDPLEKLLLLKSEKFDLIISDPFLGLFLLLAIPSFVIPLLSFPTSSAVLLALGLPSPLSYVPSPFSLS 168 (496)
T ss_pred HHHHHHHHHHHHhchHHHHHHhhcCCccEEEechhhHHHHHhcccceEEEeecccCchHHHHhcCCcCcccccCcccCcc
Confidence 34454556666777777766554445999999999888888888775 99999988877654443221111 0000 0
Q ss_pred c---C------------CcchHHH---------HHHHHHhcc----cCCCcEEEecc-hHhhhccchhh-HH-HhhcCCe
Q 035856 106 N---N------------CEESLFS---------SMLSKLGGV----LPQASAAVMNF-YQELYCSSQLT-ND-LNSKVPS 154 (278)
Q Consensus 106 ~---~------------~~~~~~~---------~~~~~~~~~----~~~~~~~l~nt-~~~le~~~~~~-~~-~~~~~~~ 154 (278)
. . ....... ......... ...++.++.|+ +..++ .... ++ .+...++
T Consensus 169 ~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ln--~~~~~~~~~~~~~~~ 246 (496)
T KOG1192|consen 169 SGDDMSFPERVPNLIKKDLPSFLFSLSDDRKQDKISKELLGDILNWKPTASGIIVNASFIFLN--SNPLLDFEPRPLLPK 246 (496)
T ss_pred ccccCcHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhCCCcccccccHHHhhhcCeEEEEc--cCcccCCCCCCCCCC
Confidence 0 0 0000000 001111110 11222334444 54555 3322 23 2333588
Q ss_pred EEEecCCCCCCCCCCCCCCCCcchhhhHhhhcCCCC--C---------------------------------------C-
Q 035856 155 LLKVGFLTQPLPPPPLPPSDSDETGYLQWLDRQKPK--S---------------------------------------R- 192 (278)
Q Consensus 155 v~~VG~~~~pl~~~~~~~~~~~~~~~~~wld~~~~~--s---------------------------------------~- 192 (278)
+++|| |++...... ....|.+|++.++.. + +
T Consensus 247 v~~IG----~l~~~~~~~---~~~~~~~wl~~~~~~~~~vvyvSfGS~~~~~~lp~~~~~~l~~~l~~~~~~~FiW~~~~ 319 (496)
T KOG1192|consen 247 VIPIG----PLHVKDSKQ---KSPLPLEWLDILDESRHSVVYISFGSMVNSADLPEEQKKELAKALESLQGVTFLWKYRP 319 (496)
T ss_pred ceEEC----cEEecCccc---cccccHHHHHHHhhccCCeEEEECCcccccccCCHHHHHHHHHHHHhCCCceEEEEecC
Confidence 99999 998762211 111588898887774 3 1
Q ss_pred ---------CC----CCeEEecCcchhhh-cccccccEEEeeCCchhHHHHHHhCcceeeccccCChhHHHHHHHHHhcc
Q 035856 193 ---------TS----GRGKIVLQAPQTQV-LGHFSIGVFVIHSGANSVCESIANGVLMICRPFYGDHRMNARMVEEVWGI 258 (278)
Q Consensus 193 ---------~~----~~~~v~~w~pq~~i-L~~~~v~~fitHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~ 258 (278)
.+ +|....+|+||.++ |.|++||+||||||||||+|++++|||||++|+++||+.||+++++.|++
T Consensus 320 ~~~~~~~~~~~~~~~~nV~~~~W~PQ~~lll~H~~v~~FvTHgG~nSt~E~~~~GvP~v~~Plf~DQ~~Na~~i~~~g~~ 399 (496)
T KOG1192|consen 320 DDSIYFPEGLPNRGRGNVVLSKWAPQNDLLLDHPAVGGFVTHGGWNSTLESIYSGVPMVCVPLFGDQPLNARLLVRHGGG 399 (496)
T ss_pred CcchhhhhcCCCCCcCceEEecCCCcHHHhcCCCcCcEEEECCcccHHHHHHhcCCceecCCccccchhHHHHHHhCCCE
Confidence 11 13444479999999 59999999999999999999999999999999999999999999999777
Q ss_pred eEEecCC
Q 035856 259 GVKVEGI 265 (278)
Q Consensus 259 G~~l~~~ 265 (278)
++....+
T Consensus 400 ~v~~~~~ 406 (496)
T KOG1192|consen 400 GVLDKRD 406 (496)
T ss_pred EEEehhh
Confidence 7776543
No 25
>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.
Probab=99.92 E-value=2.7e-24 Score=193.59 Aligned_cols=81 Identities=26% Similarity=0.403 Sum_probs=76.6
Q ss_pred CCCeEEecCcchhhhcccccccEEEeeCCchhHHHHHHhCcceeeccccCChhHHHHHHHHHhcceEEecCCCcCHHHHH
Q 035856 194 SGRGKIVLQAPQTQVLGHFSIGVFVIHSGANSVCESIANGVLMICRPFYGDHRMNARMVEEVWGIGVKVEGILLTKSGVL 273 (278)
Q Consensus 194 ~~~~~v~~w~pq~~iL~~~~v~~fitHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~~~~l~ 273 (278)
++|.++.+|+||.++|+|++ +||||||+||++|++++|||+|++|+..||+.||+++++. |+|+.++...+++++|.
T Consensus 287 ~~~v~~~~~~p~~~ll~~~d--~~I~hgG~~t~~eal~~GvP~v~~P~~~dQ~~~a~~~~~~-G~g~~l~~~~~~~~~l~ 363 (401)
T cd03784 287 PDNVRVVDFVPHDWLLPRCA--AVVHHGGAGTTAAALRAGVPQLVVPFFGDQPFWAARVAEL-GAGPALDPRELTAERLA 363 (401)
T ss_pred CCceEEeCCCCHHHHhhhhh--eeeecCCchhHHHHHHcCCCEEeeCCCCCcHHHHHHHHHC-CCCCCCCcccCCHHHHH
Confidence 57888899999999999988 9999999999999999999999999999999999999998 99999987778999999
Q ss_pred hhhh
Q 035856 274 QSLD 277 (278)
Q Consensus 274 ~~i~ 277 (278)
++|+
T Consensus 364 ~al~ 367 (401)
T cd03784 364 AALR 367 (401)
T ss_pred HHHH
Confidence 8875
No 26
>TIGR01426 MGT glycosyltransferase, MGT family. This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production.
Probab=99.91 E-value=6.1e-23 Score=184.34 Aligned_cols=82 Identities=27% Similarity=0.387 Sum_probs=76.6
Q ss_pred CCCCeEEecCcchhhhcccccccEEEeeCCchhHHHHHHhCcceeeccccCChhHHHHHHHHHhcceEEecCCCcCHHHH
Q 035856 193 TSGRGKIVLQAPQTQVLGHFSIGVFVIHSGANSVCESIANGVLMICRPFYGDHRMNARMVEEVWGIGVKVEGILLTKSGV 272 (278)
Q Consensus 193 ~~~~~~v~~w~pq~~iL~~~~v~~fitHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~~~~l 272 (278)
.++|..+.+|+||.++|+|++ +||||||+||++|++++|+|+|++|...||..|++++++. |+|+.+....+++++|
T Consensus 273 ~~~~v~~~~~~p~~~ll~~~~--~~I~hgG~~t~~Eal~~G~P~v~~p~~~dq~~~a~~l~~~-g~g~~l~~~~~~~~~l 349 (392)
T TIGR01426 273 LPPNVEVRQWVPQLEILKKAD--AFITHGGMNSTMEALFNGVPMVAVPQGADQPMTARRIAEL-GLGRHLPPEEVTAEKL 349 (392)
T ss_pred CCCCeEEeCCCCHHHHHhhCC--EEEECCCchHHHHHHHhCCCEEecCCcccHHHHHHHHHHC-CCEEEeccccCCHHHH
Confidence 356788889999999999999 9999999999999999999999999999999999999997 9999998878899999
Q ss_pred Hhhhh
Q 035856 273 LQSLD 277 (278)
Q Consensus 273 ~~~i~ 277 (278)
.++|+
T Consensus 350 ~~ai~ 354 (392)
T TIGR01426 350 REAVL 354 (392)
T ss_pred HHHHH
Confidence 98875
No 27
>COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]
Probab=99.75 E-value=1.8e-18 Score=155.08 Aligned_cols=84 Identities=24% Similarity=0.322 Sum_probs=80.2
Q ss_pred CCCCCeEEecCcchhhhcccccccEEEeeCCchhHHHHHHhCcceeeccccCChhHHHHHHHHHhcceEEecCCCcCHHH
Q 035856 192 RTSGRGKIVLQAPQTQVLGHFSIGVFVIHSGANSVCESIANGVLMICRPFYGDHRMNARMVEEVWGIGVKVEGILLTKSG 271 (278)
Q Consensus 192 ~~~~~~~v~~w~pq~~iL~~~~v~~fitHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~~~~ 271 (278)
..++|..+..|+||.++|++++ +||||||+|||+|||++|||+|++|...||+.||.++++. |+|+.++.+.++.+.
T Consensus 281 ~~p~n~~v~~~~p~~~~l~~ad--~vI~hGG~gtt~eaL~~gvP~vv~P~~~DQ~~nA~rve~~-G~G~~l~~~~l~~~~ 357 (406)
T COG1819 281 NVPDNVIVADYVPQLELLPRAD--AVIHHGGAGTTSEALYAGVPLVVIPDGADQPLNAERVEEL-GAGIALPFEELTEER 357 (406)
T ss_pred cCCCceEEecCCCHHHHhhhcC--EEEecCCcchHHHHHHcCCCEEEecCCcchhHHHHHHHHc-CCceecCcccCCHHH
Confidence 4578999999999999999999 9999999999999999999999999999999999999998 999999988899999
Q ss_pred HHhhhhC
Q 035856 272 VLQSLDL 278 (278)
Q Consensus 272 l~~~i~~ 278 (278)
++++|++
T Consensus 358 l~~av~~ 364 (406)
T COG1819 358 LRAAVNE 364 (406)
T ss_pred HHHHHHH
Confidence 9999874
No 28
>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1
Probab=99.63 E-value=5.1e-14 Score=122.91 Aligned_cols=82 Identities=20% Similarity=0.299 Sum_probs=74.0
Q ss_pred CCCeEEecCc--chhhhcccccccEEEeeCCchhHHHHHHhCcceeeccc--cCChhHHHHHHHHHhcceEEecCCCcCH
Q 035856 194 SGRGKIVLQA--PQTQVLGHFSIGVFVIHSGANSVCESIANGVLMICRPF--YGDHRMNARMVEEVWGIGVKVEGILLTK 269 (278)
Q Consensus 194 ~~~~~v~~w~--pq~~iL~~~~v~~fitHgG~~s~~eal~~GvP~l~~P~--~~DQ~~na~~~~~~~g~G~~l~~~~~~~ 269 (278)
.+|..+..+. .-.++|+.++ ++|+|||+||++|+++.|+|+|++|. +.||..||+++++. |+|+.++..++++
T Consensus 231 ~~ni~~~~~~~~~~~~~m~~ad--~vIs~~G~~t~~Ea~~~g~P~l~ip~~~~~EQ~~~a~~l~~~-G~~~~~~~~~~~~ 307 (318)
T PF13528_consen 231 PGNIHVRPFSTPDFAELMAAAD--LVISKGGYTTISEALALGKPALVIPRPGQDEQEYNARKLEEL-GLGIVLSQEDLTP 307 (318)
T ss_pred CCCEEEeecChHHHHHHHHhCC--EEEECCCHHHHHHHHHcCCCEEEEeCCCCchHHHHHHHHHHC-CCeEEcccccCCH
Confidence 5677777765 4467899999 99999999999999999999999999 78999999999998 9999999889999
Q ss_pred HHHHhhhhC
Q 035856 270 SGVLQSLDL 278 (278)
Q Consensus 270 ~~l~~~i~~ 278 (278)
+.|+++|++
T Consensus 308 ~~l~~~l~~ 316 (318)
T PF13528_consen 308 ERLAEFLER 316 (318)
T ss_pred HHHHHHHhc
Confidence 999999874
No 29
>TIGR00661 MJ1255 conserved hypothetical protein. This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases.
Probab=99.51 E-value=1.1e-12 Score=114.79 Aligned_cols=72 Identities=21% Similarity=0.302 Sum_probs=63.0
Q ss_pred CCCCeEEecCcc--hhhhcccccccEEEeeCCchhHHHHHHhCcceeeccccC--ChhHHHHHHHHHhcceEEecCCCc
Q 035856 193 TSGRGKIVLQAP--QTQVLGHFSIGVFVIHSGANSVCESIANGVLMICRPFYG--DHRMNARMVEEVWGIGVKVEGILL 267 (278)
Q Consensus 193 ~~~~~~v~~w~p--q~~iL~~~~v~~fitHgG~~s~~eal~~GvP~l~~P~~~--DQ~~na~~~~~~~g~G~~l~~~~~ 267 (278)
.++|..+.+|.| ..+.|..++ ++|||+|++|+.|++++|+|++.+|..+ ||..||+.+++. |+|+.++..++
T Consensus 227 ~~~~v~~~~~~~~~~~~~l~~ad--~vI~~~G~~t~~Ea~~~g~P~l~ip~~~~~eQ~~na~~l~~~-g~~~~l~~~~~ 302 (321)
T TIGR00661 227 YNENVEIRRITTDNFKELIKNAE--LVITHGGFSLISEALSLGKPLIVIPDLGQFEQGNNAVKLEDL-GCGIALEYKEL 302 (321)
T ss_pred cCCCEEEEECChHHHHHHHHhCC--EEEECCChHHHHHHHHcCCCEEEEcCCCcccHHHHHHHHHHC-CCEEEcChhhH
Confidence 357888889998 356677777 9999999999999999999999999865 899999999998 99999976655
No 30
>PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B.
Probab=99.21 E-value=1.1e-11 Score=98.09 Aligned_cols=81 Identities=17% Similarity=0.294 Sum_probs=67.6
Q ss_pred CCeEEecCcc-hhhhcccccccEEEeeCCchhHHHHHHhCcceeeccccC----ChhHHHHHHHHHhcceEEecCCCcCH
Q 035856 195 GRGKIVLQAP-QTQVLGHFSIGVFVIHSGANSVCESIANGVLMICRPFYG----DHRMNARMVEEVWGIGVKVEGILLTK 269 (278)
Q Consensus 195 ~~~~v~~w~p-q~~iL~~~~v~~fitHgG~~s~~eal~~GvP~l~~P~~~----DQ~~na~~~~~~~g~G~~l~~~~~~~ 269 (278)
.+..+.+|.+ ..+++..++ ++|||||.+|++|++++|+|+|.+|.-. +|..||..+++. |.|..+.....+.
T Consensus 55 ~~v~~~~~~~~m~~~m~~aD--lvIs~aG~~Ti~E~l~~g~P~I~ip~~~~~~~~q~~na~~~~~~-g~~~~~~~~~~~~ 131 (167)
T PF04101_consen 55 PNVKVFGFVDNMAELMAAAD--LVISHAGAGTIAEALALGKPAIVIPLPGAADNHQEENAKELAKK-GAAIMLDESELNP 131 (167)
T ss_dssp CCCEEECSSSSHHHHHHHHS--EEEECS-CHHHHHHHHCT--EEEE--TTT-T-CHHHHHHHHHHC-CCCCCSECCC-SC
T ss_pred CcEEEEechhhHHHHHHHcC--EEEeCCCccHHHHHHHcCCCeeccCCCCcchHHHHHHHHHHHHc-CCccccCcccCCH
Confidence 5778889999 788999999 9999999999999999999999999988 999999999998 9999998777777
Q ss_pred HHHHhhhhC
Q 035856 270 SGVLQSLDL 278 (278)
Q Consensus 270 ~~l~~~i~~ 278 (278)
++|.++|++
T Consensus 132 ~~L~~~i~~ 140 (167)
T PF04101_consen 132 EELAEAIEE 140 (167)
T ss_dssp CCHHHHHHC
T ss_pred HHHHHHHHH
Confidence 778777753
No 31
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=98.89 E-value=2.7e-09 Score=94.52 Aligned_cols=77 Identities=17% Similarity=0.233 Sum_probs=67.6
Q ss_pred EEecCc-c-hhhhcccccccEEEeeCCchhHHHHHHhCcceeecccc-----CChhHHHHHHHHHhcceEEecCCCcCHH
Q 035856 198 KIVLQA-P-QTQVLGHFSIGVFVIHSGANSVCESIANGVLMICRPFY-----GDHRMNARMVEEVWGIGVKVEGILLTKS 270 (278)
Q Consensus 198 ~v~~w~-p-q~~iL~~~~v~~fitHgG~~s~~eal~~GvP~l~~P~~-----~DQ~~na~~~~~~~g~G~~l~~~~~~~~ 270 (278)
.+..|+ + -.+++++++ ++|||+|.+|+.|++++|+|+|.+|+. ++|..||+++++. |+|..+..+.++++
T Consensus 237 ~~~~f~~~~m~~~~~~ad--lvIsr~G~~t~~E~~~~g~P~I~iP~~~~~~~~~Q~~Na~~l~~~-g~~~~l~~~~~~~~ 313 (352)
T PRK12446 237 RQFEYVHGELPDILAITD--FVISRAGSNAIFEFLTLQKPMLLIPLSKFASRGDQILNAESFERQ-GYASVLYEEDVTVN 313 (352)
T ss_pred EEecchhhhHHHHHHhCC--EEEECCChhHHHHHHHcCCCEEEEcCCCCCCCchHHHHHHHHHHC-CCEEEcchhcCCHH
Confidence 445666 3 357899999 999999999999999999999999984 4899999999998 99999987888999
Q ss_pred HHHhhhh
Q 035856 271 GVLQSLD 277 (278)
Q Consensus 271 ~l~~~i~ 277 (278)
.|.++++
T Consensus 314 ~l~~~l~ 320 (352)
T PRK12446 314 SLIKHVE 320 (352)
T ss_pred HHHHHHH
Confidence 8888775
No 32
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=98.49 E-value=3.4e-07 Score=81.21 Aligned_cols=78 Identities=21% Similarity=0.252 Sum_probs=68.8
Q ss_pred eEEecCc-chhhhcccccccEEEeeCCchhHHHHHHhCcceeeccc----cCChhHHHHHHHHHhcceEEecCCCcCHHH
Q 035856 197 GKIVLQA-PQTQVLGHFSIGVFVIHSGANSVCESIANGVLMICRPF----YGDHRMNARMVEEVWGIGVKVEGILLTKSG 271 (278)
Q Consensus 197 ~~v~~w~-pq~~iL~~~~v~~fitHgG~~s~~eal~~GvP~l~~P~----~~DQ~~na~~~~~~~g~G~~l~~~~~~~~~ 271 (278)
..+.+|+ ...+++..++ ++|+|+|.++++||+++|+|+|+.|. .++|..|+..+.+. |.|..+..++++.+.
T Consensus 237 v~~~g~~~~~~~~~~~~d--~~i~~~g~~~~~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~~i~~~-~~g~~~~~~~~~~~~ 313 (357)
T PRK00726 237 AEVVPFIDDMAAAYAAAD--LVICRAGASTVAELAAAGLPAILVPLPHAADDHQTANARALVDA-GAALLIPQSDLTPEK 313 (357)
T ss_pred EEEeehHhhHHHHHHhCC--EEEECCCHHHHHHHHHhCCCEEEecCCCCCcCcHHHHHHHHHHC-CCEEEEEcccCCHHH
Confidence 5566887 3468999999 99999999999999999999999996 47899999999998 999999877788999
Q ss_pred HHhhhh
Q 035856 272 VLQSLD 277 (278)
Q Consensus 272 l~~~i~ 277 (278)
+.++++
T Consensus 314 l~~~i~ 319 (357)
T PRK00726 314 LAEKLL 319 (357)
T ss_pred HHHHHH
Confidence 998876
No 33
>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=98.39 E-value=6.8e-07 Score=78.90 Aligned_cols=78 Identities=21% Similarity=0.316 Sum_probs=68.6
Q ss_pred eEEecCcch-hhhcccccccEEEeeCCchhHHHHHHhCcceeeccc-cC---ChhHHHHHHHHHhcceEEecCCCcCHHH
Q 035856 197 GKIVLQAPQ-TQVLGHFSIGVFVIHSGANSVCESIANGVLMICRPF-YG---DHRMNARMVEEVWGIGVKVEGILLTKSG 271 (278)
Q Consensus 197 ~~v~~w~pq-~~iL~~~~v~~fitHgG~~s~~eal~~GvP~l~~P~-~~---DQ~~na~~~~~~~g~G~~l~~~~~~~~~ 271 (278)
..+..+..+ ..+++-++ ++||+.|.+++.|.++.|+|+|.+|. .+ +|..||+.+++. |.|..++..++|.++
T Consensus 237 ~~v~~f~~dm~~~~~~AD--LvIsRaGa~Ti~E~~a~g~P~IliP~p~~~~~~Q~~NA~~l~~~-gaa~~i~~~~lt~~~ 313 (357)
T COG0707 237 VRVLPFIDDMAALLAAAD--LVISRAGALTIAELLALGVPAILVPYPPGADGHQEYNAKFLEKA-GAALVIRQSELTPEK 313 (357)
T ss_pred EEEeeHHhhHHHHHHhcc--EEEeCCcccHHHHHHHhCCCEEEeCCCCCccchHHHHHHHHHhC-CCEEEeccccCCHHH
Confidence 455577665 57888899 99999999999999999999999996 33 899999999999 999999988899999
Q ss_pred HHhhhh
Q 035856 272 VLQSLD 277 (278)
Q Consensus 272 l~~~i~ 277 (278)
+.+.|.
T Consensus 314 l~~~i~ 319 (357)
T COG0707 314 LAELIL 319 (357)
T ss_pred HHHHHH
Confidence 988774
No 34
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=98.28 E-value=2.5e-06 Score=75.28 Aligned_cols=80 Identities=20% Similarity=0.183 Sum_probs=68.7
Q ss_pred CCeEEecCc-chhhhcccccccEEEeeCCchhHHHHHHhCcceeeccc----cCChhHHHHHHHHHhcceEEecCCCcCH
Q 035856 195 GRGKIVLQA-PQTQVLGHFSIGVFVIHSGANSVCESIANGVLMICRPF----YGDHRMNARMVEEVWGIGVKVEGILLTK 269 (278)
Q Consensus 195 ~~~~v~~w~-pq~~iL~~~~v~~fitHgG~~s~~eal~~GvP~l~~P~----~~DQ~~na~~~~~~~g~G~~l~~~~~~~ 269 (278)
+|..+.+|. ...++|+.++ ++|+|+|.++++||+++|+|+|+.|. ..+|..|+..+.+. |.|..++.++.+.
T Consensus 235 ~~v~~~g~~~~~~~~l~~ad--~~v~~sg~~t~~Eam~~G~Pvv~~~~~~~~~~~~~~~~~~l~~~-g~g~~v~~~~~~~ 311 (350)
T cd03785 235 VNYEVFPFIDDMAAAYAAAD--LVISRAGASTVAELAALGLPAILIPLPYAADDHQTANARALVKA-GAAVLIPQEELTP 311 (350)
T ss_pred CCeEEeehhhhHHHHHHhcC--EEEECCCHhHHHHHHHhCCCEEEeecCCCCCCcHHHhHHHHHhC-CCEEEEecCCCCH
Confidence 567777887 4567899999 89999999999999999999999985 46789999999998 9999998766788
Q ss_pred HHHHhhhh
Q 035856 270 SGVLQSLD 277 (278)
Q Consensus 270 ~~l~~~i~ 277 (278)
+++.++++
T Consensus 312 ~~l~~~i~ 319 (350)
T cd03785 312 ERLAAALL 319 (350)
T ss_pred HHHHHHHH
Confidence 88888875
No 35
>PRK13609 diacylglycerol glucosyltransferase; Provisional
Probab=98.23 E-value=0.00014 Score=65.16 Aligned_cols=76 Identities=21% Similarity=0.275 Sum_probs=60.8
Q ss_pred CCeEEecCcch-hhhcccccccEEEeeCCchhHHHHHHhCcceeec-cccCChhHHHHHHHHHhcceEEecCCCcCHHHH
Q 035856 195 GRGKIVLQAPQ-TQVLGHFSIGVFVIHSGANSVCESIANGVLMICR-PFYGDHRMNARMVEEVWGIGVKVEGILLTKSGV 272 (278)
Q Consensus 195 ~~~~v~~w~pq-~~iL~~~~v~~fitHgG~~s~~eal~~GvP~l~~-P~~~DQ~~na~~~~~~~g~G~~l~~~~~~~~~l 272 (278)
++..+.+|+++ .+++..++ +||+..|..+++||+++|+|+|+. |.-+.|..|+..+.+. |.|+... +.+++
T Consensus 256 ~~v~~~g~~~~~~~l~~~aD--~~v~~~gg~t~~EA~a~g~PvI~~~~~~g~~~~n~~~~~~~-G~~~~~~----~~~~l 328 (380)
T PRK13609 256 DALKVFGYVENIDELFRVTS--CMITKPGGITLSEAAALGVPVILYKPVPGQEKENAMYFERK-GAAVVIR----DDEEV 328 (380)
T ss_pred CcEEEEechhhHHHHHHhcc--EEEeCCCchHHHHHHHhCCCEEECCCCCCcchHHHHHHHhC-CcEEEEC----CHHHH
Confidence 46777799887 47899999 899999988889999999999985 6667788899988887 9988753 34556
Q ss_pred Hhhhh
Q 035856 273 LQSLD 277 (278)
Q Consensus 273 ~~~i~ 277 (278)
.++|+
T Consensus 329 ~~~i~ 333 (380)
T PRK13609 329 FAKTE 333 (380)
T ss_pred HHHHH
Confidence 55543
No 36
>PLN02605 monogalactosyldiacylglycerol synthase
Probab=98.18 E-value=0.00026 Score=63.57 Aligned_cols=76 Identities=14% Similarity=0.238 Sum_probs=60.6
Q ss_pred CCeEEecCcch-hhhcccccccEEEeeCCchhHHHHHHhCcceeeccccCChh-HHHHHHHHHhcceEEecCCCcCHHHH
Q 035856 195 GRGKIVLQAPQ-TQVLGHFSIGVFVIHSGANSVCESIANGVLMICRPFYGDHR-MNARMVEEVWGIGVKVEGILLTKSGV 272 (278)
Q Consensus 195 ~~~~v~~w~pq-~~iL~~~~v~~fitHgG~~s~~eal~~GvP~l~~P~~~DQ~-~na~~~~~~~g~G~~l~~~~~~~~~l 272 (278)
.+..+.+|+++ .+++..++ +||+.+|-++++||+++|+|+|+.+....|. .|+..+.+. |.|+.+. +.+++
T Consensus 265 ~~v~~~G~~~~~~~l~~aaD--v~V~~~g~~ti~EAma~g~PvI~~~~~pgqe~gn~~~i~~~-g~g~~~~----~~~~l 337 (382)
T PLN02605 265 IPVKVRGFVTNMEEWMGACD--CIITKAGPGTIAEALIRGLPIILNGYIPGQEEGNVPYVVDN-GFGAFSE----SPKEI 337 (382)
T ss_pred CCeEEEeccccHHHHHHhCC--EEEECCCcchHHHHHHcCCCEEEecCCCccchhhHHHHHhC-CceeecC----CHHHH
Confidence 34566688876 56788888 9999999899999999999999998777776 689889887 9998652 45666
Q ss_pred Hhhhh
Q 035856 273 LQSLD 277 (278)
Q Consensus 273 ~~~i~ 277 (278)
.++|+
T Consensus 338 a~~i~ 342 (382)
T PLN02605 338 ARIVA 342 (382)
T ss_pred HHHHH
Confidence 66553
No 37
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase. RL J Bacteriol 1993 Mar;175(6):1841-3
Probab=97.98 E-value=1.5e-05 Score=70.16 Aligned_cols=71 Identities=25% Similarity=0.379 Sum_probs=60.9
Q ss_pred chhhhcccccccEEEeeCCchhHHHHHHhCcceeecccc---CChhHHHHHHHHHhcceEEecCCCcCHHHHHhhhh
Q 035856 204 PQTQVLGHFSIGVFVIHSGANSVCESIANGVLMICRPFY---GDHRMNARMVEEVWGIGVKVEGILLTKSGVLQSLD 277 (278)
Q Consensus 204 pq~~iL~~~~v~~fitHgG~~s~~eal~~GvP~l~~P~~---~DQ~~na~~~~~~~g~G~~l~~~~~~~~~l~~~i~ 277 (278)
.-.+++..++ +||+++|-++++||+++|+|+|+.|.- ++|..|+..+.+. +.|..+..+..+.++|.++++
T Consensus 243 ~~~~~l~~ad--~~v~~~g~~~l~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~i~~~-~~G~~~~~~~~~~~~l~~~i~ 316 (348)
T TIGR01133 243 NMAAAYAAAD--LVISRAGASTVAELAAAGVPAILIPYPYAADDQYYNAKFLEDL-GAGLVIRQKELLPEKLLEALL 316 (348)
T ss_pred CHHHHHHhCC--EEEECCChhHHHHHHHcCCCEEEeeCCCCccchhhHHHHHHHC-CCEEEEecccCCHHHHHHHHH
Confidence 4467889999 999999988899999999999999863 5788899999987 999998876678899988875
No 38
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=97.94 E-value=1e-05 Score=69.41 Aligned_cols=54 Identities=7% Similarity=0.129 Sum_probs=49.5
Q ss_pred CCeEEecCcch-hhhcccccccEEEeeCCchhHHHHHHhCcceeeccccCChhHHHHH
Q 035856 195 GRGKIVLQAPQ-TQVLGHFSIGVFVIHSGANSVCESIANGVLMICRPFYGDHRMNARM 251 (278)
Q Consensus 195 ~~~~v~~w~pq-~~iL~~~~v~~fitHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~ 251 (278)
+|..+..++++ .+++..++ .+||+|| +|++|+++.|+|+|++|...+|..||+.
T Consensus 224 ~~i~~~~~~~~m~~lm~~aD--l~Is~~G-~T~~E~~a~g~P~i~i~~~~nQ~~~a~~ 278 (279)
T TIGR03590 224 PNIILFIDVENMAELMNEAD--LAIGAAG-STSWERCCLGLPSLAICLAENQQSNSQQ 278 (279)
T ss_pred CCEEEEeCHHHHHHHHHHCC--EEEECCc-hHHHHHHHcCCCEEEEEecccHHHHhhh
Confidence 46777899988 48999999 9999999 9999999999999999999999999975
No 39
>COG4671 Predicted glycosyl transferase [General function prediction only]
Probab=97.93 E-value=2.6e-05 Score=67.13 Aligned_cols=80 Identities=21% Similarity=0.225 Sum_probs=68.3
Q ss_pred CCeEEecCcch-hhhcccccccEEEeeCCchhHHHHHHhCcceeeccccC---ChhHHHHHHHHHhcceEEecCCCcCHH
Q 035856 195 GRGKIVLQAPQ-TQVLGHFSIGVFVIHSGANSVCESIANGVLMICRPFYG---DHRMNARMVEEVWGIGVKVEGILLTKS 270 (278)
Q Consensus 195 ~~~~v~~w~pq-~~iL~~~~v~~fitHgG~~s~~eal~~GvP~l~~P~~~---DQ~~na~~~~~~~g~G~~l~~~~~~~~ 270 (278)
++..+..|--+ ..++..++ ..|+-||.|+|+|-|++|+|-+++|... ||-.-|.|++++ |+--.+..+++|++
T Consensus 277 p~i~I~~f~~~~~~ll~gA~--~vVSm~GYNTvCeILs~~k~aLivPr~~p~eEQliRA~Rl~~L-GL~dvL~pe~lt~~ 353 (400)
T COG4671 277 PHISIFEFRNDFESLLAGAR--LVVSMGGYNTVCEILSFGKPALIVPRAAPREEQLIRAQRLEEL-GLVDVLLPENLTPQ 353 (400)
T ss_pred CCeEEEEhhhhHHHHHHhhh--eeeecccchhhhHHHhCCCceEEeccCCCcHHHHHHHHHHHhc-CcceeeCcccCChH
Confidence 44556666555 46677777 9999999999999999999999999844 899999999998 99888888889999
Q ss_pred HHHhhhh
Q 035856 271 GVLQSLD 277 (278)
Q Consensus 271 ~l~~~i~ 277 (278)
.+.++++
T Consensus 354 ~La~al~ 360 (400)
T COG4671 354 NLADALK 360 (400)
T ss_pred HHHHHHH
Confidence 9999885
No 40
>PRK13608 diacylglycerol glucosyltransferase; Provisional
Probab=97.76 E-value=8e-05 Score=67.06 Aligned_cols=75 Identities=20% Similarity=0.263 Sum_probs=60.0
Q ss_pred CCeEEecCcch-hhhcccccccEEEeeCCchhHHHHHHhCcceeec-cccCChhHHHHHHHHHhcceEEecCCCcCHHHH
Q 035856 195 GRGKIVLQAPQ-TQVLGHFSIGVFVIHSGANSVCESIANGVLMICR-PFYGDHRMNARMVEEVWGIGVKVEGILLTKSGV 272 (278)
Q Consensus 195 ~~~~v~~w~pq-~~iL~~~~v~~fitHgG~~s~~eal~~GvP~l~~-P~~~DQ~~na~~~~~~~g~G~~l~~~~~~~~~l 272 (278)
++..+.+|+.+ .++++.++ +||+..|-.++.||+++|+|+|+. |.-+.|..|+..+.+. |+|+..+ +.+++
T Consensus 256 ~~v~~~G~~~~~~~~~~~aD--l~I~k~gg~tl~EA~a~G~PvI~~~~~pgqe~~N~~~~~~~-G~g~~~~----~~~~l 328 (391)
T PRK13608 256 ENVLILGYTKHMNEWMASSQ--LMITKPGGITISEGLARCIPMIFLNPAPGQELENALYFEEK-GFGKIAD----TPEEA 328 (391)
T ss_pred CCeEEEeccchHHHHHHhhh--EEEeCCchHHHHHHHHhCCCEEECCCCCCcchhHHHHHHhC-CcEEEeC----CHHHH
Confidence 46667788865 46889999 999988878999999999999998 7666778999999998 9998764 34455
Q ss_pred Hhhh
Q 035856 273 LQSL 276 (278)
Q Consensus 273 ~~~i 276 (278)
.++|
T Consensus 329 ~~~i 332 (391)
T PRK13608 329 IKIV 332 (391)
T ss_pred HHHH
Confidence 4444
No 41
>TIGR00215 lpxB lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA
Probab=97.55 E-value=0.00055 Score=61.54 Aligned_cols=68 Identities=12% Similarity=0.004 Sum_probs=57.0
Q ss_pred hhhcccccccEEEeeCCchhHHHHHHhCcceeec----cccC---------ChhHHHHHHHHHhcceEEecCCCcCHHHH
Q 035856 206 TQVLGHFSIGVFVIHSGANSVCESIANGVLMICR----PFYG---------DHRMNARMVEEVWGIGVKVEGILLTKSGV 272 (278)
Q Consensus 206 ~~iL~~~~v~~fitHgG~~s~~eal~~GvP~l~~----P~~~---------DQ~~na~~~~~~~g~G~~l~~~~~~~~~l 272 (278)
..+++.++ +||+-+|..++ |++++|+|+|.. |+.. .|..|+..+.+. ++..++..+.+|++.|
T Consensus 262 ~~~l~aAD--l~V~~SGt~tl-Ea~a~G~P~Vv~yk~~pl~~~~~~~~~~~~~~~~~nil~~~-~~~pel~q~~~~~~~l 337 (385)
T TIGR00215 262 RKAMFAAD--AALLASGTAAL-EAALIKTPMVVGYRMKPLTFLIARRLVKTDYISLPNILANR-LLVPELLQEECTPHPL 337 (385)
T ss_pred HHHHHhCC--EEeecCCHHHH-HHHHcCCCEEEEEcCCHHHHHHHHHHHcCCeeeccHHhcCC-ccchhhcCCCCCHHHH
Confidence 45888899 99999998766 999999999999 7632 267788889998 9999987778999999
Q ss_pred Hhhhh
Q 035856 273 LQSLD 277 (278)
Q Consensus 273 ~~~i~ 277 (278)
.+++.
T Consensus 338 ~~~~~ 342 (385)
T TIGR00215 338 AIALL 342 (385)
T ss_pred HHHHH
Confidence 88764
No 42
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=97.52 E-value=0.0072 Score=52.74 Aligned_cols=75 Identities=20% Similarity=0.157 Sum_probs=53.4
Q ss_pred CCCeEEecCcchhh---hcccccccEEEeeCC----chhHHHHHHhCcceeeccccCChhHHHHHHHHHhcceEEecCCC
Q 035856 194 SGRGKIVLQAPQTQ---VLGHFSIGVFVIHSG----ANSVCESIANGVLMICRPFYGDHRMNARMVEEVWGIGVKVEGIL 266 (278)
Q Consensus 194 ~~~~~v~~w~pq~~---iL~~~~v~~fitHgG----~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l~~~~ 266 (278)
.++..+.+|+++.+ ++..++ +++.++. -++++||+++|+|+|+.+..+ +...+.+. +.|...+..
T Consensus 246 ~~~v~~~g~~~~~~~~~~~~~~d--~~l~~s~~e~~~~~~lEa~a~g~PvI~~~~~~----~~~~i~~~-~~g~~~~~~- 317 (364)
T cd03814 246 YPNVHFLGFLDGEELAAAYASAD--VFVFPSRTETFGLVVLEAMASGLPVVAPDAGG----PADIVTDG-ENGLLVEPG- 317 (364)
T ss_pred CCcEEEEeccCHHHHHHHHHhCC--EEEECcccccCCcHHHHHHHcCCCEEEcCCCC----chhhhcCC-cceEEcCCC-
Confidence 45677778988765 688888 6776553 378999999999999987543 44556665 788877654
Q ss_pred cCHHHHHhhhh
Q 035856 267 LTKSGVLQSLD 277 (278)
Q Consensus 267 ~~~~~l~~~i~ 277 (278)
+.+++.++++
T Consensus 318 -~~~~l~~~i~ 327 (364)
T cd03814 318 -DAEAFAAALA 327 (364)
T ss_pred -CHHHHHHHHH
Confidence 4555655553
No 43
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=96.93 E-value=0.091 Score=46.72 Aligned_cols=74 Identities=16% Similarity=0.176 Sum_probs=51.3
Q ss_pred CCeEEecCcchhh---hcccccccEEEee---CC-chhHHHHHHhCcceeeccccCChhHHHHHHHHHhcceEEecCCCc
Q 035856 195 GRGKIVLQAPQTQ---VLGHFSIGVFVIH---SG-ANSVCESIANGVLMICRPFYGDHRMNARMVEEVWGIGVKVEGILL 267 (278)
Q Consensus 195 ~~~~v~~w~pq~~---iL~~~~v~~fitH---gG-~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~ 267 (278)
++..+.+|+|+.+ ++..++ +|+.. -| -.+++||+++|+|+|+-...+ ....+.+. +.|..++.+
T Consensus 283 ~~v~~~g~~~~~~~~~~~~~ad--i~l~ps~~e~~~~~l~Ea~a~G~Pvi~s~~~~----~~e~i~~~-~~g~~~~~~-- 353 (398)
T cd03800 283 DRVDFPGRVSREDLPALYRAAD--VFVNPALYEPFGLTALEAMACGLPVVATAVGG----PRDIVVDG-VTGLLVDPR-- 353 (398)
T ss_pred ceEEEeccCCHHHHHHHHHhCC--EEEecccccccCcHHHHHHhcCCCEEECCCCC----HHHHccCC-CCeEEeCCC--
Confidence 4566679999866 478888 56543 22 268999999999999876533 44556665 788888654
Q ss_pred CHHHHHhhhh
Q 035856 268 TKSGVLQSLD 277 (278)
Q Consensus 268 ~~~~l~~~i~ 277 (278)
+.+++.++|.
T Consensus 354 ~~~~l~~~i~ 363 (398)
T cd03800 354 DPEALAAALR 363 (398)
T ss_pred CHHHHHHHHH
Confidence 4666666653
No 44
>KOG3349 consensus Predicted glycosyltransferase [General function prediction only]
Probab=96.55 E-value=0.0031 Score=47.84 Aligned_cols=53 Identities=21% Similarity=0.185 Sum_probs=42.2
Q ss_pred cCcch-hhhcccccccEEEeeCCchhHHHHHHhCcceeeccc--cC--ChhHHHHHHHHH
Q 035856 201 LQAPQ-TQVLGHFSIGVFVIHSGANSVCESIANGVLMICRPF--YG--DHRMNARMVEEV 255 (278)
Q Consensus 201 ~w~pq-~~iL~~~~v~~fitHgG~~s~~eal~~GvP~l~~P~--~~--DQ~~na~~~~~~ 255 (278)
+|.|- .+....++ .+|+|+|.||.+|.|..|+|.|+++- .. -|-.-|..+++.
T Consensus 69 ~f~psl~e~I~~Ad--lVIsHAGaGS~letL~l~KPlivVvNd~LMDNHQ~ELA~qL~~e 126 (170)
T KOG3349|consen 69 DFSPSLTEDIRSAD--LVISHAGAGSCLETLRLGKPLIVVVNDSLMDNHQLELAKQLAEE 126 (170)
T ss_pred ecCccHHHHHhhcc--EEEecCCcchHHHHHHcCCCEEEEeChHhhhhHHHHHHHHHHhc
Confidence 67776 66777789 99999999999999999999999983 11 255666666665
No 45
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=96.55 E-value=0.21 Score=43.45 Aligned_cols=65 Identities=15% Similarity=0.101 Sum_probs=45.6
Q ss_pred CCCeEEecCcchhh---hcccccccEEEeeC----CchhHHHHHHhCcceeeccccCChhHHHHHHHHHhcceEEecCC
Q 035856 194 SGRGKIVLQAPQTQ---VLGHFSIGVFVIHS----GANSVCESIANGVLMICRPFYGDHRMNARMVEEVWGIGVKVEGI 265 (278)
Q Consensus 194 ~~~~~v~~w~pq~~---iL~~~~v~~fitHg----G~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l~~~ 265 (278)
.++..+.+++|+.+ ++.+++ +++..+ .-++++||+++|+|+|+... ...+..+.+. +.|..++..
T Consensus 258 ~~~v~~~g~~~~~~~~~~~~~ad--~~l~~s~~e~~~~~~~Ea~~~g~PvI~~~~----~~~~~~i~~~-~~g~~~~~~ 329 (374)
T cd03817 258 ADRVIFTGFVPREELPDYYKAAD--LFVFASTTETQGLVLLEAMAAGLPVVAVDA----PGLPDLVADG-ENGFLFPPG 329 (374)
T ss_pred CCcEEEeccCChHHHHHHHHHcC--EEEecccccCcChHHHHHHHcCCcEEEeCC----CChhhheecC-ceeEEeCCC
Confidence 45677779999865 577888 455332 23689999999999999764 3345556665 678887654
No 46
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=96.35 E-value=0.32 Score=42.03 Aligned_cols=77 Identities=10% Similarity=0.058 Sum_probs=50.5
Q ss_pred CCCeEEecCcchh---hhcccccccEEEe--eCCchhHHHHHHhCcceeeccccCChhHHHHHHHHHhcceEEecCCCcC
Q 035856 194 SGRGKIVLQAPQT---QVLGHFSIGVFVI--HSGANSVCESIANGVLMICRPFYGDHRMNARMVEEVWGIGVKVEGILLT 268 (278)
Q Consensus 194 ~~~~~v~~w~pq~---~iL~~~~v~~fit--HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~ 268 (278)
.++..+.+++++. .++..+++..+.+ -+.-++++||+++|+|+|+-+.. .....+.+. +.|..++.. +
T Consensus 258 ~~~v~~~g~~~~~~~~~~~~~ad~~i~~~~~~~~~~~~~Ea~~~G~pvI~~~~~----~~~~~~~~~-~~g~~~~~~--~ 330 (377)
T cd03798 258 EDRVTFLGAVPHEEVPAYYAAADVFVLPSLREGFGLVLLEAMACGLPVVATDVG----GIPEIITDG-ENGLLVPPG--D 330 (377)
T ss_pred cceEEEeCCCCHHHHHHHHHhcCeeecchhhccCChHHHHHHhcCCCEEEecCC----ChHHHhcCC-cceeEECCC--C
Confidence 4567777999875 4567777433222 23347889999999999987653 344455554 667777654 5
Q ss_pred HHHHHhhhh
Q 035856 269 KSGVLQSLD 277 (278)
Q Consensus 269 ~~~l~~~i~ 277 (278)
.+++.++++
T Consensus 331 ~~~l~~~i~ 339 (377)
T cd03798 331 PEALAEAIL 339 (377)
T ss_pred HHHHHHHHH
Confidence 666666554
No 47
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
Probab=96.24 E-value=0.62 Score=42.33 Aligned_cols=64 Identities=20% Similarity=0.248 Sum_probs=44.6
Q ss_pred hhhcccccccEEEe-----eCCchhHHHHHHhCcceeeccccCChhHHHHHHHHHhcceEEecCCCcCHHHHHhhh
Q 035856 206 TQVLGHFSIGVFVI-----HSGANSVCESIANGVLMICRPFYGDHRMNARMVEEVWGIGVKVEGILLTKSGVLQSL 276 (278)
Q Consensus 206 ~~iL~~~~v~~fit-----HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~~~~l~~~i 276 (278)
..+++.+++ +|+. .+| .+++||+++|+|+|+-|..+++......+.+. |.++... +.+++.+++
T Consensus 314 ~~~y~~aDi-~~v~~S~~e~~g-~~~lEAma~G~PVI~g~~~~~~~e~~~~~~~~-g~~~~~~----d~~~La~~l 382 (425)
T PRK05749 314 GLLYAIADI-AFVGGSLVKRGG-HNPLEPAAFGVPVISGPHTFNFKEIFERLLQA-GAAIQVE----DAEDLAKAV 382 (425)
T ss_pred HHHHHhCCE-EEECCCcCCCCC-CCHHHHHHhCCCEEECCCccCHHHHHHHHHHC-CCeEEEC----CHHHHHHHH
Confidence 345677773 2442 344 45999999999999999888888887777666 7777653 345555554
No 48
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=96.14 E-value=0.63 Score=42.89 Aligned_cols=74 Identities=16% Similarity=0.119 Sum_probs=48.8
Q ss_pred CCeEEecCcchhh---hcccccccEEEeeC---C-chhHHHHHHhCcceeeccccCChhHHHHHHHH---HhcceEEecC
Q 035856 195 GRGKIVLQAPQTQ---VLGHFSIGVFVIHS---G-ANSVCESIANGVLMICRPFYGDHRMNARMVEE---VWGIGVKVEG 264 (278)
Q Consensus 195 ~~~~v~~w~pq~~---iL~~~~v~~fitHg---G-~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~---~~g~G~~l~~ 264 (278)
.+..+.+++++.+ +++.++ +||.-. | -++++||+++|+|+|+....+ ....+.+ . +.|..++.
T Consensus 312 ~~V~f~G~v~~~ev~~~~~~aD--v~V~pS~~E~~g~~vlEAmA~G~PVI~s~~gg----~~eiv~~~~~~-~~G~lv~~ 384 (465)
T PLN02871 312 TPTVFTGMLQGDELSQAYASGD--VFVMPSESETLGFVVLEAMASGVPVVAARAGG----IPDIIPPDQEG-KTGFLYTP 384 (465)
T ss_pred CCeEEeccCCHHHHHHHHHHCC--EEEECCcccccCcHHHHHHHcCCCEEEcCCCC----cHhhhhcCCCC-CceEEeCC
Confidence 3556668998654 677888 666433 2 257899999999999876532 2233444 4 67888765
Q ss_pred CCcCHHHHHhhhh
Q 035856 265 ILLTKSGVLQSLD 277 (278)
Q Consensus 265 ~~~~~~~l~~~i~ 277 (278)
+ +.+++.++|+
T Consensus 385 ~--d~~~la~~i~ 395 (465)
T PLN02871 385 G--DVDDCVEKLE 395 (465)
T ss_pred C--CHHHHHHHHH
Confidence 4 4566666654
No 49
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra
Probab=95.38 E-value=0.3 Score=43.20 Aligned_cols=78 Identities=13% Similarity=0.103 Sum_probs=49.3
Q ss_pred CCCeEEecCcch-hhhcccccccEEEeeC-C-chhHHHHHHhCcceeeccccCChhHHHHHHHHHhcceEEecCCCcCHH
Q 035856 194 SGRGKIVLQAPQ-TQVLGHFSIGVFVIHS-G-ANSVCESIANGVLMICRPFYGDHRMNARMVEEVWGIGVKVEGILLTKS 270 (278)
Q Consensus 194 ~~~~~v~~w~pq-~~iL~~~~v~~fitHg-G-~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~~~ 270 (278)
.++..+.++.++ ..++..+++-++.++. | -.+++||+++|+|+|+...-. .....+.+. ..|..++.+ +.+
T Consensus 260 ~~~v~~~g~~~~~~~~~~~ad~~v~~S~~Eg~~~~~lEAma~G~PvI~~~~~~---g~~~~v~~~-~~G~lv~~~--d~~ 333 (372)
T cd04949 260 EDYVFLKGYTRDLDEVYQKAQLSLLTSQSEGFGLSLMEALSHGLPVISYDVNY---GPSEIIEDG-ENGYLVPKG--DIE 333 (372)
T ss_pred cceEEEcCCCCCHHHHHhhhhEEEecccccccChHHHHHHhCCCCEEEecCCC---CcHHHcccC-CCceEeCCC--cHH
Confidence 345555566554 4578888855555543 3 368999999999999975421 123445554 678877653 466
Q ss_pred HHHhhhh
Q 035856 271 GVLQSLD 277 (278)
Q Consensus 271 ~l~~~i~ 277 (278)
++.++|.
T Consensus 334 ~la~~i~ 340 (372)
T cd04949 334 ALAEAII 340 (372)
T ss_pred HHHHHHH
Confidence 6666653
No 50
>TIGR03492 conserved hypothetical protein. This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown.
Probab=95.15 E-value=0.043 Score=49.55 Aligned_cols=67 Identities=15% Similarity=0.106 Sum_probs=48.5
Q ss_pred hhhhcccccccEEEeeCCchhHHHHHHhCcceeeccccCChhHHHHHHHHH---hcceEEecCCCcCHHHHHhhhh
Q 035856 205 QTQVLGHFSIGVFVIHSGANSVCESIANGVLMICRPFYGDHRMNARMVEEV---WGIGVKVEGILLTKSGVLQSLD 277 (278)
Q Consensus 205 q~~iL~~~~v~~fitHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~---~g~G~~l~~~~~~~~~l~~~i~ 277 (278)
-.++++.++ ++|+-.|.. |.|+...|+|+|.+|.-.-|. |+...++. .|-++.+.. .+.+.|.+++.
T Consensus 290 ~~~~l~~AD--lvI~rSGt~-T~E~a~lg~P~Ilip~~~~q~-na~~~~~~~~l~g~~~~l~~--~~~~~l~~~l~ 359 (396)
T TIGR03492 290 FAEILHWAD--LGIAMAGTA-TEQAVGLGKPVIQLPGKGPQF-TYGFAEAQSRLLGGSVFLAS--KNPEQAAQVVR 359 (396)
T ss_pred HHHHHHhCC--EEEECcCHH-HHHHHHhCCCEEEEeCCCCHH-HHHHHHhhHhhcCCEEecCC--CCHHHHHHHHH
Confidence 357889999 999999955 499999999999999755665 98776652 155555543 23466666553
No 51
>COG5017 Uncharacterized conserved protein [Function unknown]
Probab=94.90 E-value=0.025 Score=42.27 Aligned_cols=55 Identities=16% Similarity=0.169 Sum_probs=39.1
Q ss_pred hhhcccccccEEEeeCCchhHHHHHHhCcceeeccccC------C--hhHHHHHHHHHhcceEEec
Q 035856 206 TQVLGHFSIGVFVIHSGANSVCESIANGVLMICRPFYG------D--HRMNARMVEEVWGIGVKVE 263 (278)
Q Consensus 206 ~~iL~~~~v~~fitHgG~~s~~eal~~GvP~l~~P~~~------D--Q~~na~~~~~~~g~G~~l~ 263 (278)
+.+...++ .+|+|||-||++.++..++|.|+.|--. | |..-|..+++. +.-+...
T Consensus 60 Qsli~dar--IVISHaG~GSIL~~~rl~kplIv~pr~s~y~elvDdHQvela~klae~-~~vv~~s 122 (161)
T COG5017 60 QSLIHDAR--IVISHAGEGSILLLLRLDKPLIVVPRSSQYQELVDDHQVELALKLAEI-NYVVACS 122 (161)
T ss_pred HHHhhcce--EEEeccCcchHHHHhhcCCcEEEEECchhHHHhhhhHHHHHHHHHHhc-CceEEEc
Confidence 34455566 9999999999999999999999999532 1 44455555555 5444443
No 52
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=94.50 E-value=2.1 Score=36.44 Aligned_cols=74 Identities=20% Similarity=0.170 Sum_probs=46.3
Q ss_pred CCeEEecCcc-hhhhcccccccEEEeeC---C-chhHHHHHHhCcceeeccccCChhHHHHHHHHHhc-ceEEecCCCcC
Q 035856 195 GRGKIVLQAP-QTQVLGHFSIGVFVIHS---G-ANSVCESIANGVLMICRPFYGDHRMNARMVEEVWG-IGVKVEGILLT 268 (278)
Q Consensus 195 ~~~~v~~w~p-q~~iL~~~~v~~fitHg---G-~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g-~G~~l~~~~~~ 268 (278)
++..+.++.. -..++..++ +++.-. | -++++||+++|+|+|+.+..+.+. .+.+. + .|..++.. +
T Consensus 235 ~~v~~~g~~~~~~~~~~~ad--~~i~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~----~~~~~-~~~g~~~~~~--~ 305 (348)
T cd03820 235 DRVILLGFTKNIEEYYAKAS--IFVLTSRFEGFPMVLLEAMAFGLPVISFDCPTGPS----EIIED-GVNGLLVPNG--D 305 (348)
T ss_pred CeEEEcCCcchHHHHHHhCC--EEEeCccccccCHHHHHHHHcCCCEEEecCCCchH----hhhcc-CcceEEeCCC--C
Confidence 3445555522 246778888 555443 2 368999999999999976544332 23344 4 78777654 4
Q ss_pred HHHHHhhhh
Q 035856 269 KSGVLQSLD 277 (278)
Q Consensus 269 ~~~l~~~i~ 277 (278)
.+++.++|.
T Consensus 306 ~~~~~~~i~ 314 (348)
T cd03820 306 VEALAEALL 314 (348)
T ss_pred HHHHHHHHH
Confidence 566666654
No 53
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=94.49 E-value=0.088 Score=46.36 Aligned_cols=75 Identities=19% Similarity=0.240 Sum_probs=52.1
Q ss_pred CCCeEEecCcchhh---hcccccccEEEee----------CCchhHHHHHHhCcceeeccccCChhHHHHHHHHHhcceE
Q 035856 194 SGRGKIVLQAPQTQ---VLGHFSIGVFVIH----------SGANSVCESIANGVLMICRPFYGDHRMNARMVEEVWGIGV 260 (278)
Q Consensus 194 ~~~~~v~~w~pq~~---iL~~~~v~~fitH----------gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~ 260 (278)
.++..+.+++|+.+ ++..++ +|+.. |--++++||+++|+|+|+-+..+ +...+.+. +.|.
T Consensus 244 ~~~v~~~g~~~~~~l~~~~~~ad--~~v~ps~~~~~~~~E~~~~~~~EA~a~G~PvI~s~~~~----~~e~i~~~-~~g~ 316 (367)
T cd05844 244 GGRVTFLGAQPHAEVRELMRRAR--IFLQPSVTAPSGDAEGLPVVLLEAQASGVPVVATRHGG----IPEAVEDG-ETGL 316 (367)
T ss_pred CCeEEECCCCCHHHHHHHHHhCC--EEEECcccCCCCCccCCchHHHHHHHcCCCEEEeCCCC----chhheecC-CeeE
Confidence 45667778998754 478888 55432 22478999999999999977643 45555665 7888
Q ss_pred EecCCCcCHHHHHhhhh
Q 035856 261 KVEGILLTKSGVLQSLD 277 (278)
Q Consensus 261 ~l~~~~~~~~~l~~~i~ 277 (278)
.++.+ +.+++.++++
T Consensus 317 ~~~~~--d~~~l~~~i~ 331 (367)
T cd05844 317 LVPEG--DVAALAAALG 331 (367)
T ss_pred EECCC--CHHHHHHHHH
Confidence 77653 5567766654
No 54
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=94.19 E-value=0.17 Score=43.86 Aligned_cols=77 Identities=17% Similarity=0.123 Sum_probs=51.7
Q ss_pred CCCeEEecCcchhh---hcccccccEEEee--CCc-hhHHHHHHhCcceeeccccCChhHHHHHHHHHhcceEEecCCCc
Q 035856 194 SGRGKIVLQAPQTQ---VLGHFSIGVFVIH--SGA-NSVCESIANGVLMICRPFYGDHRMNARMVEEVWGIGVKVEGILL 267 (278)
Q Consensus 194 ~~~~~v~~w~pq~~---iL~~~~v~~fitH--gG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~ 267 (278)
.++..+.+|+++.+ ++.++++..+-++ .|+ .+++||+++|+|+|+.+.. .+...+.+. +.|..++.+
T Consensus 242 ~~~v~~~g~~~~~~~~~~~~~ad~~i~ps~~~e~~~~~~~Ea~a~G~Pvi~~~~~----~~~e~i~~~-~~g~~~~~~-- 314 (359)
T cd03823 242 DPRVEFLGAYPQEEIDDFYAEIDVLVVPSIWPENFPLVIREALAAGVPVIASDIG----GMAELVRDG-VNGLLFPPG-- 314 (359)
T ss_pred CCeEEEeCCCCHHHHHHHHHhCCEEEEcCcccCCCChHHHHHHHCCCCEEECCCC----CHHHHhcCC-CcEEEECCC--
Confidence 35667779998765 5788884333232 344 4789999999999997653 345555554 578888764
Q ss_pred CHHHHHhhhh
Q 035856 268 TKSGVLQSLD 277 (278)
Q Consensus 268 ~~~~l~~~i~ 277 (278)
+.+++.++++
T Consensus 315 d~~~l~~~i~ 324 (359)
T cd03823 315 DAEDLAAALE 324 (359)
T ss_pred CHHHHHHHHH
Confidence 4677776664
No 55
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=94.01 E-value=0.16 Score=44.30 Aligned_cols=78 Identities=13% Similarity=0.048 Sum_probs=51.7
Q ss_pred CCCeEEecCcchh---hhcccccccEEEee---CCc-hhHHHHHHhCcceeeccccCChhHHHHHHHHHhcceEEecCCC
Q 035856 194 SGRGKIVLQAPQT---QVLGHFSIGVFVIH---SGA-NSVCESIANGVLMICRPFYGDHRMNARMVEEVWGIGVKVEGIL 266 (278)
Q Consensus 194 ~~~~~v~~w~pq~---~iL~~~~v~~fitH---gG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l~~~~ 266 (278)
.+|..+.+|+|+. .++..+++.++.++ -|+ .+++||+++|+|+|+....+....... +. +.|...+.+
T Consensus 243 ~~~V~~~g~v~~~~~~~~~~~ad~~i~ps~~~~e~~g~~~~Ea~~~g~Pvi~~~~~~~~~~i~~---~~-~~g~~~~~~- 317 (357)
T cd03795 243 LDRVRFLGRLDDEEKAALLAACDVFVFPSVERSEAFGIVLLEAMAFGKPVISTEIGTGGSYVNL---HG-VTGLVVPPG- 317 (357)
T ss_pred cceEEEcCCCCHHHHHHHHHhCCEEEeCCcccccccchHHHHHHHcCCCEEecCCCCchhHHhh---CC-CceEEeCCC-
Confidence 4677778999985 47777885444442 344 478999999999999765554433222 24 677777643
Q ss_pred cCHHHHHhhhh
Q 035856 267 LTKSGVLQSLD 277 (278)
Q Consensus 267 ~~~~~l~~~i~ 277 (278)
+.+++.++|.
T Consensus 318 -d~~~~~~~i~ 327 (357)
T cd03795 318 -DPAALAEAIR 327 (357)
T ss_pred -CHHHHHHHHH
Confidence 5666666654
No 56
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]
Probab=93.58 E-value=0.13 Score=45.89 Aligned_cols=46 Identities=28% Similarity=0.322 Sum_probs=42.9
Q ss_pred EEeeCCchhHHHHHHhCcceeeccccCChhHHHHHHHHHhcceEEecC
Q 035856 217 FVIHSGANSVCESIANGVLMICRPFYGDHRMNARMVEEVWGIGVKVEG 264 (278)
Q Consensus 217 fitHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l~~ 264 (278)
|+.+||.| .+|+++.|+|+|.=|...-|..-++++.+. |.|+.++.
T Consensus 327 lv~~GGHN-~LEpa~~~~pvi~Gp~~~Nf~ei~~~l~~~-ga~~~v~~ 372 (419)
T COG1519 327 LVPIGGHN-PLEPAAFGTPVIFGPYTFNFSDIAERLLQA-GAGLQVED 372 (419)
T ss_pred ccCCCCCC-hhhHHHcCCCEEeCCccccHHHHHHHHHhc-CCeEEECC
Confidence 55699998 789999999999999999999999999999 99999975
No 57
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....
Probab=93.52 E-value=0.19 Score=39.15 Aligned_cols=75 Identities=13% Similarity=0.121 Sum_probs=53.3
Q ss_pred CCCeEEecCcch---hhhcccccccEEEee----CCchhHHHHHHhCcceeeccccCChhHHHHHHHHHhcceEEecCCC
Q 035856 194 SGRGKIVLQAPQ---TQVLGHFSIGVFVIH----SGANSVCESIANGVLMICRPFYGDHRMNARMVEEVWGIGVKVEGIL 266 (278)
Q Consensus 194 ~~~~~v~~w~pq---~~iL~~~~v~~fitH----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l~~~~ 266 (278)
.++..+.++.++ ..++..++ ++++. +.-++++||+++|+|+|+.- ...+...+.+. +.|..++..
T Consensus 72 ~~~i~~~~~~~~~~l~~~~~~~d--i~v~~s~~e~~~~~~~Ea~~~g~pvI~~~----~~~~~e~~~~~-~~g~~~~~~- 143 (172)
T PF00534_consen 72 KENIIFLGYVPDDELDELYKSSD--IFVSPSRNEGFGLSLLEAMACGCPVIASD----IGGNNEIINDG-VNGFLFDPN- 143 (172)
T ss_dssp GTTEEEEESHSHHHHHHHHHHTS--EEEE-BSSBSS-HHHHHHHHTT-EEEEES----STHHHHHSGTT-TSEEEESTT-
T ss_pred cccccccccccccccccccccce--eccccccccccccccccccccccceeecc----ccCCceeeccc-cceEEeCCC-
Confidence 567778888873 45677778 66654 34468999999999999854 45566666665 679999875
Q ss_pred cCHHHHHhhhh
Q 035856 267 LTKSGVLQSLD 277 (278)
Q Consensus 267 ~~~~~l~~~i~ 277 (278)
+.+++.++|+
T Consensus 144 -~~~~l~~~i~ 153 (172)
T PF00534_consen 144 -DIEELADAIE 153 (172)
T ss_dssp -SHHHHHHHHH
T ss_pred -CHHHHHHHHH
Confidence 7888887765
No 58
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A.
Probab=93.51 E-value=0.083 Score=39.42 Aligned_cols=74 Identities=20% Similarity=0.275 Sum_probs=44.5
Q ss_pred CCeEEecCcch-hhhcccccccEEEee--CC-chhHHHHHHhCcceeeccccCChhHHHHHHHHHhcceEEecCCCcCHH
Q 035856 195 GRGKIVLQAPQ-TQVLGHFSIGVFVIH--SG-ANSVCESIANGVLMICRPFYGDHRMNARMVEEVWGIGVKVEGILLTKS 270 (278)
Q Consensus 195 ~~~~v~~w~pq-~~iL~~~~v~~fitH--gG-~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~~~ 270 (278)
++....+|+++ .++++.++++...+. -| -+.+.|++++|+|+|+.+. ......+.. +.|..+ .+ +.+
T Consensus 53 ~~v~~~g~~~e~~~~l~~~dv~l~p~~~~~~~~~k~~e~~~~G~pvi~~~~-----~~~~~~~~~-~~~~~~-~~--~~~ 123 (135)
T PF13692_consen 53 PNVRFHGFVEELPEILAAADVGLIPSRFNEGFPNKLLEAMAAGKPVIASDN-----GAEGIVEED-GCGVLV-AN--DPE 123 (135)
T ss_dssp CTEEEE-S-HHHHHHHHC-SEEEE-BSS-SCC-HHHHHHHCTT--EEEEHH-----HCHCHS----SEEEE--TT---HH
T ss_pred CCEEEcCCHHHHHHHHHhCCEEEEEeeCCCcCcHHHHHHHHhCCCEEECCc-----chhhheeec-CCeEEE-CC--CHH
Confidence 47777888864 467888998776653 23 3899999999999999875 122233334 788777 33 788
Q ss_pred HHHhhhh
Q 035856 271 GVLQSLD 277 (278)
Q Consensus 271 ~l~~~i~ 277 (278)
++.++|+
T Consensus 124 ~l~~~i~ 130 (135)
T PF13692_consen 124 ELAEAIE 130 (135)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9988875
No 59
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=93.10 E-value=0.081 Score=47.19 Aligned_cols=34 Identities=15% Similarity=0.063 Sum_probs=28.6
Q ss_pred hhhcccccccEEEeeCCchhHHHHHHhCcceeecccc
Q 035856 206 TQVLGHFSIGVFVIHSGANSVCESIANGVLMICRPFY 242 (278)
Q Consensus 206 ~~iL~~~~v~~fitHgG~~s~~eal~~GvP~l~~P~~ 242 (278)
..+++.++ ++|+-+|.+++ |++++|+|+|..|-.
T Consensus 256 ~~~~~~aD--l~v~~sG~~~l-Ea~a~G~PvI~~~~~ 289 (380)
T PRK00025 256 REAMAAAD--AALAASGTVTL-ELALLKVPMVVGYKV 289 (380)
T ss_pred HHHHHhCC--EEEECccHHHH-HHHHhCCCEEEEEcc
Confidence 56788888 99998887666 999999999998643
No 60
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=93.09 E-value=0.22 Score=42.81 Aligned_cols=76 Identities=16% Similarity=0.172 Sum_probs=51.7
Q ss_pred CCCCeEEecCcchh---hhcccccccEEEe----eCCchhHHHHHHhCcceeeccccCChhHHHHHHHHHhcceEEecCC
Q 035856 193 TSGRGKIVLQAPQT---QVLGHFSIGVFVI----HSGANSVCESIANGVLMICRPFYGDHRMNARMVEEVWGIGVKVEGI 265 (278)
Q Consensus 193 ~~~~~~v~~w~pq~---~iL~~~~v~~fit----HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l~~~ 265 (278)
..++..+.+++++. .++..++ ++|. .+.-++++||+++|+|+|+.+. ......+.+. +.|..++..
T Consensus 254 ~~~~v~~~g~~~~~~~~~~~~~~d--i~i~~~~~~~~~~~~~Ea~~~g~pvI~~~~----~~~~~~~~~~-~~g~~~~~~ 326 (374)
T cd03801 254 LGDRVTFLGFVPDEDLPALYAAAD--VFVLPSLYEGFGLVLLEAMAAGLPVVASDV----GGIPEVVEDG-ETGLLVPPG 326 (374)
T ss_pred CCcceEEEeccChhhHHHHHHhcC--EEEecchhccccchHHHHHHcCCcEEEeCC----CChhHHhcCC-cceEEeCCC
Confidence 34567777899765 4677888 4543 2335789999999999999765 3345555555 778877654
Q ss_pred CcCHHHHHhhhh
Q 035856 266 LLTKSGVLQSLD 277 (278)
Q Consensus 266 ~~~~~~l~~~i~ 277 (278)
+.+++.+++.
T Consensus 327 --~~~~l~~~i~ 336 (374)
T cd03801 327 --DPEALAEAIL 336 (374)
T ss_pred --CHHHHHHHHH
Confidence 3666666554
No 61
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=92.91 E-value=0.25 Score=43.04 Aligned_cols=77 Identities=17% Similarity=0.252 Sum_probs=49.7
Q ss_pred CCCeEEecCcchhh---hcccccccEEEeeCC-------chhHHHHHHhCcceeeccccCChhHHHHHHHHHhcceEEec
Q 035856 194 SGRGKIVLQAPQTQ---VLGHFSIGVFVIHSG-------ANSVCESIANGVLMICRPFYGDHRMNARMVEEVWGIGVKVE 263 (278)
Q Consensus 194 ~~~~~v~~w~pq~~---iL~~~~v~~fitHgG-------~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l~ 263 (278)
.++..+.+++++.+ ++..+++..+.++.+ -++++||+++|+|+|+.+..+.+.. +.+. +.|..++
T Consensus 274 ~~~v~~~g~~~~~~~~~~~~~~di~i~~~~~~~~~~~~~p~~~~Ea~~~G~pvi~~~~~~~~~~----~~~~-~~g~~~~ 348 (394)
T cd03794 274 LDNVTFLGRVPKEELPELLAAADVGLVPLKPGPAFEGVSPSKLFEYMAAGKPVLASVDGESAEL----VEEA-GAGLVVP 348 (394)
T ss_pred CCcEEEeCCCChHHHHHHHHhhCeeEEeccCcccccccCchHHHHHHHCCCcEEEecCCCchhh----hccC-CcceEeC
Confidence 35677778998765 577888433333221 2347999999999999987655433 3333 6677776
Q ss_pred CCCcCHHHHHhhhh
Q 035856 264 GILLTKSGVLQSLD 277 (278)
Q Consensus 264 ~~~~~~~~l~~~i~ 277 (278)
.+ +.+++.++|.
T Consensus 349 ~~--~~~~l~~~i~ 360 (394)
T cd03794 349 PG--DPEALAAAIL 360 (394)
T ss_pred CC--CHHHHHHHHH
Confidence 54 5666666654
No 62
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases. wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.
Probab=92.84 E-value=0.14 Score=45.04 Aligned_cols=78 Identities=13% Similarity=0.085 Sum_probs=52.4
Q ss_pred CCCCeEEecCcchh---hhcccccccEEEeeCCc-hhHHHHHHhCcceeeccccCChhHHHHHHHHHhcceEEecCCCcC
Q 035856 193 TSGRGKIVLQAPQT---QVLGHFSIGVFVIHSGA-NSVCESIANGVLMICRPFYGDHRMNARMVEEVWGIGVKVEGILLT 268 (278)
Q Consensus 193 ~~~~~~v~~w~pq~---~iL~~~~v~~fitHgG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~ 268 (278)
..+|+.+.+++|+. .+++.+++-++-+.-|+ .+++||+++|+|+|+....+ ....+.+. +.|..++.+ +
T Consensus 240 ~~~~V~~~g~~~~~~~~~~~~~ad~~v~ps~e~~g~~~~Eama~G~Pvi~~~~~~----~~e~i~~~-~~G~~~~~~--~ 312 (351)
T cd03804 240 AGPNVTFLGRVSDEELRDLYARARAFLFPAEEDFGIVPVEAMASGTPVIAYGKGG----ALETVIDG-VTGILFEEQ--T 312 (351)
T ss_pred cCCCEEEecCCCHHHHHHHHHhCCEEEECCcCCCCchHHHHHHcCCCEEEeCCCC----CcceeeCC-CCEEEeCCC--C
Confidence 35678888999985 46788884333334444 46789999999999986533 23345554 678887654 5
Q ss_pred HHHHHhhhh
Q 035856 269 KSGVLQSLD 277 (278)
Q Consensus 269 ~~~l~~~i~ 277 (278)
.++++++|+
T Consensus 313 ~~~la~~i~ 321 (351)
T cd03804 313 VESLAAAVE 321 (351)
T ss_pred HHHHHHHHH
Confidence 666666654
No 63
>PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process
Probab=92.67 E-value=1.7 Score=38.96 Aligned_cols=69 Identities=17% Similarity=0.063 Sum_probs=40.2
Q ss_pred hhhhcccccccEEEeeCCchhHHHHHHhCcceeeccc-cCChhHHHHHHHHHhc-ceEE-------e----cCCCcCHHH
Q 035856 205 QTQVLGHFSIGVFVIHSGANSVCESIANGVLMICRPF-YGDHRMNARMVEEVWG-IGVK-------V----EGILLTKSG 271 (278)
Q Consensus 205 q~~iL~~~~v~~fitHgG~~s~~eal~~GvP~l~~P~-~~DQ~~na~~~~~~~g-~G~~-------l----~~~~~~~~~ 271 (278)
-.+++..++ +.+.-+| -.|+|+...|+|||+.=- ..=-+..++++... . +|+. + -.+..|++.
T Consensus 254 ~~~~m~~ad--~al~~SG-TaTLE~Al~g~P~Vv~Yk~~~lt~~iak~lvk~-~~isL~Niia~~~v~PEliQ~~~~~~~ 329 (373)
T PF02684_consen 254 SYDAMAAAD--AALAASG-TATLEAALLGVPMVVAYKVSPLTYFIAKRLVKV-KYISLPNIIAGREVVPELIQEDATPEN 329 (373)
T ss_pred hHHHHHhCc--chhhcCC-HHHHHHHHhCCCEEEEEcCcHHHHHHHHHhhcC-CEeechhhhcCCCcchhhhcccCCHHH
Confidence 345666666 5555555 568999999999987632 21234455665543 2 2221 1 134677777
Q ss_pred HHhhhh
Q 035856 272 VLQSLD 277 (278)
Q Consensus 272 l~~~i~ 277 (278)
|.+++.
T Consensus 330 i~~~~~ 335 (373)
T PF02684_consen 330 IAAELL 335 (373)
T ss_pred HHHHHH
Confidence 776653
No 64
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
Probab=92.47 E-value=0.4 Score=43.38 Aligned_cols=77 Identities=21% Similarity=0.242 Sum_probs=50.9
Q ss_pred CCeEEecCcchhhhc---ccccccEEEeeCC----chhHHHHHHhCcceeeccccCChhHHHHHHHHHhcceEEecCCCc
Q 035856 195 GRGKIVLQAPQTQVL---GHFSIGVFVIHSG----ANSVCESIANGVLMICRPFYGDHRMNARMVEEVWGIGVKVEGILL 267 (278)
Q Consensus 195 ~~~~v~~w~pq~~iL---~~~~v~~fitHgG----~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~ 267 (278)
++....+|+++.++. ...+..+|+...- -++++||+++|+|+|+-...+ ....+.+. +.|..+... -
T Consensus 289 ~~V~f~G~v~~~e~~~~~~~~~~~v~v~~S~~Eg~p~~llEAma~G~PVIas~vgg----~~e~i~~~-~~G~l~~~~-~ 362 (407)
T cd04946 289 ISVNFTGELSNSEVYKLYKENPVDVFVNLSESEGLPVSIMEAMSFGIPVIATNVGG----TPEIVDNG-GNGLLLSKD-P 362 (407)
T ss_pred ceEEEecCCChHHHHHHHhhcCCCEEEeCCccccccHHHHHHHHcCCCEEeCCCCC----cHHHhcCC-CcEEEeCCC-C
Confidence 345666999987544 4433347776443 368999999999999965433 44555554 588887642 3
Q ss_pred CHHHHHhhhh
Q 035856 268 TKSGVLQSLD 277 (278)
Q Consensus 268 ~~~~l~~~i~ 277 (278)
+.+++.++|+
T Consensus 363 ~~~~la~~I~ 372 (407)
T cd04946 363 TPNELVSSLS 372 (407)
T ss_pred CHHHHHHHHH
Confidence 5677777764
No 65
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=92.43 E-value=0.48 Score=42.05 Aligned_cols=72 Identities=13% Similarity=0.084 Sum_probs=48.8
Q ss_pred CCeEEecCcch---hhhcccccccEEEeeCCchhHHHHHHhCcceeeccccCChhHHHHHHHHHhcceEEecCCCcCHHH
Q 035856 195 GRGKIVLQAPQ---TQVLGHFSIGVFVIHSGANSVCESIANGVLMICRPFYGDHRMNARMVEEVWGIGVKVEGILLTKSG 271 (278)
Q Consensus 195 ~~~~v~~w~pq---~~iL~~~~v~~fitHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~~~~ 271 (278)
++..+.+.+++ ..++.+++ ++++-.|. .+.||.++|+|+|..+-.++++. +.+. |.+..+.. +.++
T Consensus 255 ~~v~~~~~~~~~~~~~~l~~ad--~vv~~Sg~-~~~EA~a~g~PvI~~~~~~~~~e----~~~~-g~~~lv~~---d~~~ 323 (365)
T TIGR00236 255 KRVHLIEPLEYLDFLNLAANSH--LILTDSGG-VQEEAPSLGKPVLVLRDTTERPE----TVEA-GTNKLVGT---DKEN 323 (365)
T ss_pred CCEEEECCCChHHHHHHHHhCC--EEEECChh-HHHHHHHcCCCEEECCCCCCChH----HHhc-CceEEeCC---CHHH
Confidence 46666665554 45667888 88887763 47999999999999876666552 2334 76665532 5667
Q ss_pred HHhhhh
Q 035856 272 VLQSLD 277 (278)
Q Consensus 272 l~~~i~ 277 (278)
|.++++
T Consensus 324 i~~ai~ 329 (365)
T TIGR00236 324 ITKAAK 329 (365)
T ss_pred HHHHHH
Confidence 766654
No 66
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=92.43 E-value=0.39 Score=43.53 Aligned_cols=76 Identities=20% Similarity=0.232 Sum_probs=51.9
Q ss_pred CCCCeEEecCcchhh---hcccccccEEEe--e-------CCc-hhHHHHHHhCcceeeccccCChhHHHHHHHHHhcce
Q 035856 193 TSGRGKIVLQAPQTQ---VLGHFSIGVFVI--H-------SGA-NSVCESIANGVLMICRPFYGDHRMNARMVEEVWGIG 259 (278)
Q Consensus 193 ~~~~~~v~~w~pq~~---iL~~~~v~~fit--H-------gG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~G 259 (278)
..++..+.+|+|+.+ ++..++ +||. + =|+ +.++||+++|+|+|+....+ ....+.+. ..|
T Consensus 277 l~~~V~~~G~~~~~el~~~l~~aD--v~v~pS~~~~~g~~Eg~p~~llEAma~G~PVI~t~~~g----~~E~v~~~-~~G 349 (406)
T PRK15427 277 LEDVVEMPGFKPSHEVKAMLDDAD--VFLLPSVTGADGDMEGIPVALMEAMAVGIPVVSTLHSG----IPELVEAD-KSG 349 (406)
T ss_pred CCCeEEEeCCCCHHHHHHHHHhCC--EEEECCccCCCCCccCccHHHHHHHhCCCCEEEeCCCC----chhhhcCC-Cce
Confidence 346677779999865 577888 5554 2 244 57899999999999976533 33445554 578
Q ss_pred EEecCCCcCHHHHHhhhh
Q 035856 260 VKVEGILLTKSGVLQSLD 277 (278)
Q Consensus 260 ~~l~~~~~~~~~l~~~i~ 277 (278)
..++.+ +.+++.++|.
T Consensus 350 ~lv~~~--d~~~la~ai~ 365 (406)
T PRK15427 350 WLVPEN--DAQALAQRLA 365 (406)
T ss_pred EEeCCC--CHHHHHHHHH
Confidence 877654 5667776664
No 67
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Probab=92.25 E-value=0.4 Score=42.93 Aligned_cols=76 Identities=14% Similarity=0.173 Sum_probs=49.3
Q ss_pred CCCeEEecCcchhh---hcccccccEEEee----CCc-hhHHHHHHhCcceeeccccCChhHHHHHHHHHhcceEEecCC
Q 035856 194 SGRGKIVLQAPQTQ---VLGHFSIGVFVIH----SGA-NSVCESIANGVLMICRPFYGDHRMNARMVEEVWGIGVKVEGI 265 (278)
Q Consensus 194 ~~~~~v~~w~pq~~---iL~~~~v~~fitH----gG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l~~~ 265 (278)
..+..+.+++|+.+ +++.++ +|+.. -|+ .+++||+++|+|+|+....+ +...+.+. ..|..+..
T Consensus 256 ~~~v~~~G~~~~~~l~~~~~~aD--v~v~pS~~~E~f~~~~lEAma~G~PVI~s~~gg----~~Eiv~~~-~~G~~l~~- 327 (380)
T PRK15484 256 GDRCIMLGGQPPEKMHNYYPLAD--LVVVPSQVEEAFCMVAVEAMAAGKPVLASTKGG----ITEFVLEG-ITGYHLAE- 327 (380)
T ss_pred CCcEEEeCCCCHHHHHHHHHhCC--EEEeCCCCccccccHHHHHHHcCCCEEEeCCCC----cHhhcccC-CceEEEeC-
Confidence 34566778888754 578888 55543 333 57789999999999986532 33445554 57875522
Q ss_pred CcCHHHHHhhhh
Q 035856 266 LLTKSGVLQSLD 277 (278)
Q Consensus 266 ~~~~~~l~~~i~ 277 (278)
.-+.+++.++|.
T Consensus 328 ~~d~~~la~~I~ 339 (380)
T PRK15484 328 PMTSDSIISDIN 339 (380)
T ss_pred CCCHHHHHHHHH
Confidence 125677776664
No 68
>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc). The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st
Probab=91.85 E-value=0.41 Score=42.25 Aligned_cols=72 Identities=15% Similarity=0.088 Sum_probs=48.2
Q ss_pred CCeEEecCcchh---hhcccccccEEEeeCCchhHHHHHHhCcceeeccccCChhHHHHHHHHHhcceEEecCCCcCHHH
Q 035856 195 GRGKIVLQAPQT---QVLGHFSIGVFVIHSGANSVCESIANGVLMICRPFYGDHRMNARMVEEVWGIGVKVEGILLTKSG 271 (278)
Q Consensus 195 ~~~~v~~w~pq~---~iL~~~~v~~fitHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~~~~ 271 (278)
++..+.+...+. .++..++ +||+-.| +.+.||++.|+|+|..+-. |. ++.+.+. |+++.+.. +.++
T Consensus 258 ~~v~~~~~~~~~~~~~l~~~ad--~~v~~Sg-gi~~Ea~~~g~PvI~~~~~--~~--~~~~~~~-g~~~~~~~---~~~~ 326 (363)
T cd03786 258 PNVLLISPLGYLYFLLLLKNAD--LVLTDSG-GIQEEASFLGVPVLNLRDR--TE--RPETVES-GTNVLVGT---DPEA 326 (363)
T ss_pred CCEEEECCcCHHHHHHHHHcCc--EEEEcCc-cHHhhhhhcCCCEEeeCCC--Cc--cchhhhe-eeEEecCC---CHHH
Confidence 455555544443 4577788 9999998 7777999999999998643 22 3345555 77666542 3666
Q ss_pred HHhhhh
Q 035856 272 VLQSLD 277 (278)
Q Consensus 272 l~~~i~ 277 (278)
|.++++
T Consensus 327 i~~~i~ 332 (363)
T cd03786 327 ILAAIE 332 (363)
T ss_pred HHHHHH
Confidence 766654
No 69
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=91.73 E-value=0.46 Score=41.35 Aligned_cols=77 Identities=16% Similarity=0.149 Sum_probs=49.8
Q ss_pred CCCeEEecCcchhh---hcccccccEEEee--------CCchhHHHHHHhCcceeeccccCChhHHHHHHHHHhcceEEe
Q 035856 194 SGRGKIVLQAPQTQ---VLGHFSIGVFVIH--------SGANSVCESIANGVLMICRPFYGDHRMNARMVEEVWGIGVKV 262 (278)
Q Consensus 194 ~~~~~v~~w~pq~~---iL~~~~v~~fitH--------gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l 262 (278)
.++..+.+++|+.+ ++.++++..+-+. |.-++++||+++|+|+|+.+.. +. ...+.+. ..|..+
T Consensus 235 ~~~v~~~g~~~~~~l~~~~~~adi~l~~s~~~~~~~~e~~~~~~~Ea~a~G~Pvi~~~~~-~~---~~~i~~~-~~g~~~ 309 (355)
T cd03799 235 EDRVTLLGAKSQEEVRELLRAADLFVLPSVTAADGDREGLPVVLMEAMAMGLPVISTDVS-GI---PELVEDG-ETGLLV 309 (355)
T ss_pred CCeEEECCcCChHHHHHHHHhCCEEEecceecCCCCccCccHHHHHHHHcCCCEEecCCC-Cc---chhhhCC-CceEEe
Confidence 46677779998654 6677884443332 2237899999999999997652 22 2234433 478777
Q ss_pred cCCCcCHHHHHhhhh
Q 035856 263 EGILLTKSGVLQSLD 277 (278)
Q Consensus 263 ~~~~~~~~~l~~~i~ 277 (278)
+.+ +.+++.++|+
T Consensus 310 ~~~--~~~~l~~~i~ 322 (355)
T cd03799 310 PPG--DPEALADAIE 322 (355)
T ss_pred CCC--CHHHHHHHHH
Confidence 654 5666766654
No 70
>PRK14089 ipid-A-disaccharide synthase; Provisional
Probab=91.02 E-value=0.1 Score=46.14 Aligned_cols=68 Identities=16% Similarity=0.185 Sum_probs=50.0
Q ss_pred hhhcccccccEEEeeCCchhHHHHHHhCcceeeccccC--ChhHHHHHHHHHh--cceEEe-------------cCCCcC
Q 035856 206 TQVLGHFSIGVFVIHSGANSVCESIANGVLMICRPFYG--DHRMNARMVEEVW--GIGVKV-------------EGILLT 268 (278)
Q Consensus 206 ~~iL~~~~v~~fitHgG~~s~~eal~~GvP~l~~P~~~--DQ~~na~~~~~~~--g~G~~l-------------~~~~~~ 268 (278)
.+++..++ +.|+-+|-.|+ |+...|+|||. +.-. =|+.||++++... |+.-.+ -.+.+|
T Consensus 230 ~~~m~~aD--lal~~SGT~TL-E~al~g~P~Vv-~Yk~~~lty~iak~lv~~~~igL~Nii~~~~~~~~vvPEllQ~~~t 305 (347)
T PRK14089 230 HKALLEAE--FAFICSGTATL-EAALIGTPFVL-AYKAKAIDYFIAKMFVKLKHIGLANIFFDFLGKEPLHPELLQEFVT 305 (347)
T ss_pred HHHHHhhh--HHHhcCcHHHH-HHHHhCCCEEE-EEeCCHHHHHHHHHHHcCCeeehHHHhcCCCcccccCchhhcccCC
Confidence 46788888 99999998877 99999999988 5433 4888999988321 332223 235688
Q ss_pred HHHHHhhhh
Q 035856 269 KSGVLQSLD 277 (278)
Q Consensus 269 ~~~l~~~i~ 277 (278)
++.|.+++.
T Consensus 306 ~~~la~~i~ 314 (347)
T PRK14089 306 VENLLKAYK 314 (347)
T ss_pred HHHHHHHHH
Confidence 888887764
No 71
>PLN02275 transferase, transferring glycosyl groups
Probab=90.46 E-value=0.86 Score=40.63 Aligned_cols=71 Identities=14% Similarity=0.130 Sum_probs=49.1
Q ss_pred CeEEe-cCcchhhh---cccccccEEEe-e-----CC-chhHHHHHHhCcceeeccccCChhHHHHHHHHHhcceEEecC
Q 035856 196 RGKIV-LQAPQTQV---LGHFSIGVFVI-H-----SG-ANSVCESIANGVLMICRPFYGDHRMNARMVEEVWGIGVKVEG 264 (278)
Q Consensus 196 ~~~v~-~w~pq~~i---L~~~~v~~fit-H-----gG-~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l~~ 264 (278)
+..+. .|+|+.++ ++.++ +|+. + -| -++++||+++|+|+|+...- -+...+.+. +.|..++
T Consensus 287 ~v~~~~~~~~~~~~~~~l~~aD--v~v~~~~s~~~e~~p~~llEAmA~G~PVVa~~~g----g~~eiv~~g-~~G~lv~- 358 (371)
T PLN02275 287 HVAFRTMWLEAEDYPLLLGSAD--LGVSLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS----CIGELVKDG-KNGLLFS- 358 (371)
T ss_pred ceEEEcCCCCHHHHHHHHHhCC--EEEEeccccccccccHHHHHHHHCCCCEEEecCC----ChHHHccCC-CCeEEEC-
Confidence 44444 48888655 88899 5553 1 12 35799999999999997542 255566665 6898885
Q ss_pred CCcCHHHHHhhhh
Q 035856 265 ILLTKSGVLQSLD 277 (278)
Q Consensus 265 ~~~~~~~l~~~i~ 277 (278)
+.+++.++|.
T Consensus 359 ---~~~~la~~i~ 368 (371)
T PLN02275 359 ---SSSELADQLL 368 (371)
T ss_pred ---CHHHHHHHHH
Confidence 3788888875
No 72
>TIGR02918 accessory Sec system glycosylation protein GtfA. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.
Probab=90.19 E-value=6.7 Score=36.66 Aligned_cols=64 Identities=14% Similarity=0.173 Sum_probs=43.0
Q ss_pred CCCeEEecCcchhhhcccccccEEEe---eCCc-hhHHHHHHhCcceeeccccCChhHHHHHHHHHhcceEEec
Q 035856 194 SGRGKIVLQAPQTQVLGHFSIGVFVI---HSGA-NSVCESIANGVLMICRPFYGDHRMNARMVEEVWGIGVKVE 263 (278)
Q Consensus 194 ~~~~~v~~w~pq~~iL~~~~v~~fit---HgG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l~ 263 (278)
.+++...++.+-.+++..++ +|+. .=|+ .+++||+++|+|+|+.-..+ -+...+++. ..|..++
T Consensus 375 ~~~V~f~G~~~~~~~~~~ad--v~v~pS~~Egfgl~~lEAma~G~PVI~~dv~~---G~~eiI~~g-~nG~lv~ 442 (500)
T TIGR02918 375 QDYIHLKGHRNLSEVYKDYE--LYLSASTSEGFGLTLMEAVGSGLGMIGFDVNY---GNPTFIEDN-KNGYLIP 442 (500)
T ss_pred CCeEEEcCCCCHHHHHHhCC--EEEEcCccccccHHHHHHHHhCCCEEEecCCC---CCHHHccCC-CCEEEEe
Confidence 34555667887788899988 5554 2344 68999999999999976421 123344444 4677765
No 73
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=90.01 E-value=0.8 Score=41.08 Aligned_cols=75 Identities=17% Similarity=0.198 Sum_probs=49.5
Q ss_pred CCCeEEecCcchh---hhcccccccEEEe---eCCc-hhHHHHHHhCcceeeccccCChhHHHHHHHHHhcceEEecCCC
Q 035856 194 SGRGKIVLQAPQT---QVLGHFSIGVFVI---HSGA-NSVCESIANGVLMICRPFYGDHRMNARMVEEVWGIGVKVEGIL 266 (278)
Q Consensus 194 ~~~~~v~~w~pq~---~iL~~~~v~~fit---HgG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l~~~~ 266 (278)
.++..+.+++++. +++..++ +|+. +-|+ .+++||+++|+|+|+....+ ....+.+. +.|..++.+
T Consensus 282 ~~~v~~~g~~~~~~~~~~l~~ad--~~v~ps~~E~~g~~~lEAma~G~Pvi~~~~~~----~~e~i~~~-~~g~~~~~~- 353 (405)
T TIGR03449 282 ADRVRFLPPRPPEELVHVYRAAD--VVAVPSYNESFGLVAMEAQACGTPVVAARVGG----LPVAVADG-ETGLLVDGH- 353 (405)
T ss_pred CceEEECCCCCHHHHHHHHHhCC--EEEECCCCCCcChHHHHHHHcCCCEEEecCCC----cHhhhccC-CceEECCCC-
Confidence 3567777888875 4688888 5553 2343 58999999999999976533 33344454 677777643
Q ss_pred cCHHHHHhhhh
Q 035856 267 LTKSGVLQSLD 277 (278)
Q Consensus 267 ~~~~~l~~~i~ 277 (278)
+.+++.++|.
T Consensus 354 -d~~~la~~i~ 363 (405)
T TIGR03449 354 -DPADWADALA 363 (405)
T ss_pred -CHHHHHHHHH
Confidence 4566665553
No 74
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=89.83 E-value=0.51 Score=42.40 Aligned_cols=76 Identities=16% Similarity=0.149 Sum_probs=50.0
Q ss_pred CCeEEecCcchhh---hcccccccEEEee-CCc-hhHHHHHHhCcceeeccccCChhHHHHHHHHHhcceEEecCCCcCH
Q 035856 195 GRGKIVLQAPQTQ---VLGHFSIGVFVIH-SGA-NSVCESIANGVLMICRPFYGDHRMNARMVEEVWGIGVKVEGILLTK 269 (278)
Q Consensus 195 ~~~~v~~w~pq~~---iL~~~~v~~fitH-gG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~~ 269 (278)
++..+.+++|+.+ ++..+++-++.+. .|. ++++||+++|+|+|+... .-....+.+. ..|..++.+ +.
T Consensus 281 ~~V~f~G~v~~~~~~~~l~~adv~v~~s~~e~~~~~llEAmA~G~PVIas~~----~g~~e~i~~~-~~G~lv~~~--d~ 353 (396)
T cd03818 281 SRVHFLGRVPYDQYLALLQVSDVHVYLTYPFVLSWSLLEAMACGCLVVGSDT----APVREVITDG-ENGLLVDFF--DP 353 (396)
T ss_pred ceEEEeCCCCHHHHHHHHHhCcEEEEcCcccccchHHHHHHHCCCCEEEcCC----CCchhhcccC-CceEEcCCC--CH
Confidence 4666779999865 5677884333332 333 489999999999999654 3344455554 567777654 56
Q ss_pred HHHHhhhh
Q 035856 270 SGVLQSLD 277 (278)
Q Consensus 270 ~~l~~~i~ 277 (278)
+++.++|.
T Consensus 354 ~~la~~i~ 361 (396)
T cd03818 354 DALAAAVI 361 (396)
T ss_pred HHHHHHHH
Confidence 77776664
No 75
>PLN02501 digalactosyldiacylglycerol synthase
Probab=89.81 E-value=9.6 Score=37.10 Aligned_cols=43 Identities=16% Similarity=0.332 Sum_probs=30.6
Q ss_pred EecCcchh-hhcccccccEEEee---CC-chhHHHHHHhCcceeeccccC
Q 035856 199 IVLQAPQT-QVLGHFSIGVFVIH---SG-ANSVCESIANGVLMICRPFYG 243 (278)
Q Consensus 199 v~~w~pq~-~iL~~~~v~~fitH---gG-~~s~~eal~~GvP~l~~P~~~ 243 (278)
..++..+. .++...+ +||.- =| -++++||+++|+|+|+.-.-+
T Consensus 605 FLG~~dd~~~lyasaD--VFVlPS~sEgFGlVlLEAMA~GlPVVATd~pG 652 (794)
T PLN02501 605 FLKGRDHADDSLHGYK--VFINPSISDVLCTATAEALAMGKFVVCADHPS 652 (794)
T ss_pred ecCCCCCHHHHHHhCC--EEEECCCcccchHHHHHHHHcCCCEEEecCCC
Confidence 34666644 4788888 66552 22 378999999999999987644
No 76
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=89.76 E-value=1.1 Score=38.67 Aligned_cols=75 Identities=17% Similarity=0.138 Sum_probs=47.1
Q ss_pred CCCeEEecCcchhh---hcccccccEEEee-CC-chhHHHHHHhCcceeeccccCChhHHHHHHHHHhcceEEecCCCcC
Q 035856 194 SGRGKIVLQAPQTQ---VLGHFSIGVFVIH-SG-ANSVCESIANGVLMICRPFYGDHRMNARMVEEVWGIGVKVEGILLT 268 (278)
Q Consensus 194 ~~~~~v~~w~pq~~---iL~~~~v~~fitH-gG-~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~ 268 (278)
.++..+.+|+++.+ ++..+++-++-++ .| -++++||+++|+|+|+.+..+ ....+.+ +.|...+.+
T Consensus 261 ~~~v~~~g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G~PvI~~~~~~----~~~~~~~--~~~~~~~~~--- 331 (375)
T cd03821 261 EDRVTFTGMLYGEDKAAALADADLFVLPSHSENFGIVVAEALACGTPVVTTDKVP----WQELIEY--GCGWVVDDD--- 331 (375)
T ss_pred cceEEEcCCCChHHHHHHHhhCCEEEeccccCCCCcHHHHHHhcCCCEEEcCCCC----HHHHhhc--CceEEeCCC---
Confidence 45667779999654 5788884333333 22 368999999999999976432 3333333 677766543
Q ss_pred HHHHHhhhh
Q 035856 269 KSGVLQSLD 277 (278)
Q Consensus 269 ~~~l~~~i~ 277 (278)
.+++.++|.
T Consensus 332 ~~~~~~~i~ 340 (375)
T cd03821 332 VDALAAALR 340 (375)
T ss_pred hHHHHHHHH
Confidence 356665553
No 77
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=89.69 E-value=0.81 Score=39.28 Aligned_cols=73 Identities=21% Similarity=0.218 Sum_probs=46.5
Q ss_pred CeEEecCcch-hhhcccccccEEEeeC---C-chhHHHHHHhCcceeeccccCChhHHHHHHHHHhcceEEecCCCcCHH
Q 035856 196 RGKIVLQAPQ-TQVLGHFSIGVFVIHS---G-ANSVCESIANGVLMICRPFYGDHRMNARMVEEVWGIGVKVEGILLTKS 270 (278)
Q Consensus 196 ~~~v~~w~pq-~~iL~~~~v~~fitHg---G-~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~~~ 270 (278)
+....++..+ ..++..++ +++... | -++++||+++|+|+|+-+..+ ....+.+. +.|..++.+ +.+
T Consensus 247 ~v~~~g~~~~~~~~~~~ad--i~i~ps~~e~~~~~~~Ea~~~G~Pvi~s~~~~----~~~~i~~~-~~g~~~~~~--~~~ 317 (359)
T cd03808 247 RVEFLGFRDDVPELLAAAD--VFVLPSYREGLPRVLLEAMAMGRPVIATDVPG----CREAVIDG-VNGFLVPPG--DAE 317 (359)
T ss_pred eEEEeeccccHHHHHHhcc--EEEecCcccCcchHHHHHHHcCCCEEEecCCC----chhhhhcC-cceEEECCC--CHH
Confidence 4444455332 45778888 555433 2 478999999999999976533 34455554 778877654 466
Q ss_pred HHHhhhh
Q 035856 271 GVLQSLD 277 (278)
Q Consensus 271 ~l~~~i~ 277 (278)
++.+++.
T Consensus 318 ~~~~~i~ 324 (359)
T cd03808 318 ALADAIE 324 (359)
T ss_pred HHHHHHH
Confidence 6666553
No 78
>PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length. They are found in archaea and some bacteria and have no known function.
Probab=89.50 E-value=14 Score=32.56 Aligned_cols=48 Identities=19% Similarity=0.157 Sum_probs=34.0
Q ss_pred hhhcccccccEEEeeCCchhHHHHHHhCcceeeccccCChhHHHHHHHHHhcc
Q 035856 206 TQVLGHFSIGVFVIHSGANSVCESIANGVLMICRPFYGDHRMNARMVEEVWGI 258 (278)
Q Consensus 206 ~~iL~~~~v~~fitHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~ 258 (278)
.++|.+++ ++|+=|| .-+.||...|+|.|-+ +-++-...-+.+.+. |+
T Consensus 243 ~~Ll~~a~--l~Ig~gg-TMa~EAA~LGtPaIs~-~~g~~~~vd~~L~~~-Gl 290 (335)
T PF04007_consen 243 LDLLYYAD--LVIGGGG-TMAREAALLGTPAISC-FPGKLLAVDKYLIEK-GL 290 (335)
T ss_pred HHHHHhcC--EEEeCCc-HHHHHHHHhCCCEEEe-cCCcchhHHHHHHHC-CC
Confidence 47899999 9999776 6678999999999974 223322333556665 65
No 79
>COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=89.21 E-value=0.54 Score=39.91 Aligned_cols=67 Identities=13% Similarity=0.210 Sum_probs=52.4
Q ss_pred CCeEEecCcc-hhhhcccccccEEEeeCCchhHHHHHHhCcceeeccccCChhHHHHHHHHHhcceEEecCC
Q 035856 195 GRGKIVLQAP-QTQVLGHFSIGVFVIHSGANSVCESIANGVLMICRPFYGDHRMNARMVEEVWGIGVKVEGI 265 (278)
Q Consensus 195 ~~~~v~~w~p-q~~iL~~~~v~~fitHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l~~~ 265 (278)
+|..+..... -.+++..++ +.|+-+| .+++|++.-|+|.+++|+..-|---|+..+.. |+-..+...
T Consensus 210 ~~i~~~~~~~dma~LMke~d--~aI~AaG-stlyEa~~lgvP~l~l~~a~NQ~~~a~~f~~l-g~~~~l~~~ 277 (318)
T COG3980 210 PNINLYIDTNDMAELMKEAD--LAISAAG-STLYEALLLGVPSLVLPLAENQIATAKEFEAL-GIIKQLGYH 277 (318)
T ss_pred CCeeeEecchhHHHHHHhcc--hheeccc-hHHHHHHHhcCCceEEeeeccHHHHHHHHHhc-CchhhccCC
Confidence 4444443332 345778888 8898887 68999999999999999999999999999987 887777543
No 80
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=89.06 E-value=1 Score=38.75 Aligned_cols=72 Identities=19% Similarity=0.302 Sum_probs=42.6
Q ss_pred CCeEEecCcch-hhhcccccccEEEeeCCc----hhHHHHHHhCcceeeccccCChhHHHHHHHHHhcceEEecCCCcCH
Q 035856 195 GRGKIVLQAPQ-TQVLGHFSIGVFVIHSGA----NSVCESIANGVLMICRPFYGDHRMNARMVEEVWGIGVKVEGILLTK 269 (278)
Q Consensus 195 ~~~~v~~w~pq-~~iL~~~~v~~fitHgG~----~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~~ 269 (278)
++..+.+...+ ..++..++ +++....+ ++++||+++|+|+|+... ..+...+.+ .|..++.+ +.
T Consensus 251 ~~v~~~g~~~~~~~~~~~ad--i~v~ps~~e~~~~~~~Ea~a~g~PvI~~~~----~~~~e~~~~---~g~~~~~~--~~ 319 (365)
T cd03807 251 DKVILLGERSDVPALLNALD--VFVLSSLSEGFPNVLLEAMACGLPVVATDV----GDNAELVGD---TGFLVPPG--DP 319 (365)
T ss_pred ceEEEccccccHHHHHHhCC--EEEeCCccccCCcHHHHHHhcCCCEEEcCC----CChHHHhhc---CCEEeCCC--CH
Confidence 34444443322 46778888 66654433 789999999999998654 333444443 45555443 35
Q ss_pred HHHHhhhh
Q 035856 270 SGVLQSLD 277 (278)
Q Consensus 270 ~~l~~~i~ 277 (278)
+++.+++.
T Consensus 320 ~~l~~~i~ 327 (365)
T cd03807 320 EALAEAIE 327 (365)
T ss_pred HHHHHHHH
Confidence 56665553
No 81
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=88.81 E-value=0.64 Score=34.85 Aligned_cols=36 Identities=8% Similarity=0.011 Sum_probs=30.1
Q ss_pred CccEEEeCCCchhHHHHHHHcCCCeEeEeCChhhhh
Q 035856 56 KISCFLTDAFLTFSGEMARDMHIPWFPVFVAMPYNG 91 (278)
Q Consensus 56 ~~d~vI~D~~~~~~~~vA~~lgIP~v~~~~~~~~~~ 91 (278)
..|+++.+.....+..+|+++|||++.....+.+..
T Consensus 100 ~~~~i~~~~~~~~~~~vaE~~~iP~~~~~~~p~~~~ 135 (139)
T PF03033_consen 100 ADDVIIAAPLAFAAALVAEQLGIPGVANRLFPWFAT 135 (139)
T ss_dssp ECCEECHHHHHTHHHHHHHHHTS-EEEEESSGGGST
T ss_pred cchHHHhhhhcCccceeEhhhCchHHHHhhCCcCcC
Confidence 688888898888899999999999999988776653
No 82
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional
Probab=88.62 E-value=1.8 Score=38.03 Aligned_cols=74 Identities=14% Similarity=0.126 Sum_probs=48.0
Q ss_pred CCCeEEecCcchhhhcccc--cccEEEeeC-------Cc------hhHHHHHHhCcceeeccccCChhHHHHHHHHHhcc
Q 035856 194 SGRGKIVLQAPQTQVLGHF--SIGVFVIHS-------GA------NSVCESIANGVLMICRPFYGDHRMNARMVEEVWGI 258 (278)
Q Consensus 194 ~~~~~v~~w~pq~~iL~~~--~v~~fitHg-------G~------~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~ 258 (278)
.+|+...+|+|+.++..+- +.+.+...- .+ +=+.|++++|+|+|++. +...+..+++. ++
T Consensus 206 ~~~V~f~G~~~~eel~~~l~~~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G~PVI~~~----~~~~~~~V~~~-~~ 280 (333)
T PRK09814 206 SANISYKGWFDPEELPNELSKGFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAGLPVIVWS----KAAIADFIVEN-GL 280 (333)
T ss_pred CCCeEEecCCCHHHHHHHHhcCcCeEEcCCCCCccchhhhhccchHHHHHHHHCCCCEEECC----CccHHHHHHhC-Cc
Confidence 4577778999998764321 333332211 11 22778899999999975 45677788887 99
Q ss_pred eEEecCCCcCHHHHHhhh
Q 035856 259 GVKVEGILLTKSGVLQSL 276 (278)
Q Consensus 259 G~~l~~~~~~~~~l~~~i 276 (278)
|+.++ +.+++.+++
T Consensus 281 G~~v~----~~~el~~~l 294 (333)
T PRK09814 281 GFVVD----SLEELPEII 294 (333)
T ss_pred eEEeC----CHHHHHHHH
Confidence 99987 234454444
No 83
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=88.30 E-value=1.2 Score=38.06 Aligned_cols=72 Identities=14% Similarity=0.062 Sum_probs=46.4
Q ss_pred CCCeEEecCcch-hhhcccccccEEEee--CCchhHHHHHHhCcceeeccccCChhHHHHHHHHHhcceEEecCCCcCHH
Q 035856 194 SGRGKIVLQAPQ-TQVLGHFSIGVFVIH--SGANSVCESIANGVLMICRPFYGDHRMNARMVEEVWGIGVKVEGILLTKS 270 (278)
Q Consensus 194 ~~~~~v~~w~pq-~~iL~~~~v~~fitH--gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~~~ 270 (278)
.++..+.+|.++ .+++..+++-.+-++ +.-++++||+++|+|+|+-... .....+.+. +.|...+.+ +.+
T Consensus 245 ~~~v~~~g~~~~~~~~~~~~d~~i~ps~~e~~~~~~~Ea~~~G~PvI~~~~~----~~~e~i~~~-~~g~~~~~~--~~~ 317 (353)
T cd03811 245 ADRVHFLGFQSNPYPYLKAADLFVLSSRYEGFPNVLLEAMALGTPVVATDCP----GPREILEDG-ENGLLVPVG--DEA 317 (353)
T ss_pred CccEEEecccCCHHHHHHhCCEEEeCcccCCCCcHHHHHHHhCCCEEEcCCC----ChHHHhcCC-CceEEECCC--CHH
Confidence 455666677654 467888884333332 2246899999999999986543 445566665 788887654 344
Q ss_pred HH
Q 035856 271 GV 272 (278)
Q Consensus 271 ~l 272 (278)
.+
T Consensus 318 ~~ 319 (353)
T cd03811 318 AL 319 (353)
T ss_pred HH
Confidence 44
No 84
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=87.42 E-value=0.94 Score=40.70 Aligned_cols=74 Identities=15% Similarity=0.131 Sum_probs=47.7
Q ss_pred CCeEEecCcch-hhhcccccccEEEee--CCc-hhHHHHHHhCcceeeccccCChhHHHHHHHHHhcceEEecCCCcCHH
Q 035856 195 GRGKIVLQAPQ-TQVLGHFSIGVFVIH--SGA-NSVCESIANGVLMICRPFYGDHRMNARMVEEVWGIGVKVEGILLTKS 270 (278)
Q Consensus 195 ~~~~v~~w~pq-~~iL~~~~v~~fitH--gG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~~~ 270 (278)
++..+.+++++ ..++.++++-++-++ .|+ +.++||+++|+|+|+.+...+.. .... |.|..+. + +.+
T Consensus 280 ~~V~~~G~v~~~~~~~~~adv~v~Ps~~~eG~~~~~lEAma~G~PVV~t~~~~~~i-----~~~~-~~g~lv~-~--~~~ 350 (397)
T TIGR03087 280 PGVTVTGSVADVRPYLAHAAVAVAPLRIARGIQNKVLEAMAMAKPVVASPEAAEGI-----DALP-GAELLVA-A--DPA 350 (397)
T ss_pred CCeEEeeecCCHHHHHHhCCEEEecccccCCcccHHHHHHHcCCCEEecCcccccc-----cccC-CcceEeC-C--CHH
Confidence 45666688875 457788884333233 355 46999999999999987533221 1223 5676664 2 577
Q ss_pred HHHhhhh
Q 035856 271 GVLQSLD 277 (278)
Q Consensus 271 ~l~~~i~ 277 (278)
++.++|.
T Consensus 351 ~la~ai~ 357 (397)
T TIGR03087 351 DFAAAIL 357 (397)
T ss_pred HHHHHHH
Confidence 7777764
No 85
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=87.20 E-value=1.5 Score=40.10 Aligned_cols=77 Identities=17% Similarity=0.195 Sum_probs=47.8
Q ss_pred CCCeEEecCcchhhh---cccc--cccEEEeeC---Cc-hhHHHHHHhCcceeeccccCChhHHHHHHHHHhcceEEecC
Q 035856 194 SGRGKIVLQAPQTQV---LGHF--SIGVFVIHS---GA-NSVCESIANGVLMICRPFYGDHRMNARMVEEVWGIGVKVEG 264 (278)
Q Consensus 194 ~~~~~v~~w~pq~~i---L~~~--~v~~fitHg---G~-~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l~~ 264 (278)
.++....+++++.++ +..+ +..+|+... |+ ++++||+++|+|+|+.-.-+ ....+.+. ..|..++.
T Consensus 316 ~~~V~f~g~~~~~~~~~~~~~a~~~~Dv~v~pS~~E~fg~~~lEAma~G~PvV~s~~gg----~~eiv~~~-~~G~lv~~ 390 (439)
T TIGR02472 316 YGKVAYPKHHRPDDVPELYRLAARSRGIFVNPALTEPFGLTLLEAAACGLPIVATDDGG----PRDIIANC-RNGLLVDV 390 (439)
T ss_pred CceEEecCCCCHHHHHHHHHHHhhcCCEEecccccCCcccHHHHHHHhCCCEEEeCCCC----cHHHhcCC-CcEEEeCC
Confidence 344555567777654 4443 112777643 33 58999999999999976532 33444444 56887765
Q ss_pred CCcCHHHHHhhhh
Q 035856 265 ILLTKSGVLQSLD 277 (278)
Q Consensus 265 ~~~~~~~l~~~i~ 277 (278)
+ +.+++.++|+
T Consensus 391 ~--d~~~la~~i~ 401 (439)
T TIGR02472 391 L--DLEAIASALE 401 (439)
T ss_pred C--CHHHHHHHHH
Confidence 4 4666766653
No 86
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=87.02 E-value=1.2 Score=39.17 Aligned_cols=74 Identities=12% Similarity=0.096 Sum_probs=46.4
Q ss_pred CCCeEEecCcch-hhhcccccccEEEe---eCC-chhHHHHHHhCcceeeccccCChhHHHHHHHHHhcceEEecCCCcC
Q 035856 194 SGRGKIVLQAPQ-TQVLGHFSIGVFVI---HSG-ANSVCESIANGVLMICRPFYGDHRMNARMVEEVWGIGVKVEGILLT 268 (278)
Q Consensus 194 ~~~~~v~~w~pq-~~iL~~~~v~~fit---HgG-~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~ 268 (278)
.++..+.++.++ .+++..++ ++|. +-| -.+++||+++|+|+|+.... ..+..+.+. ..|..++.+ +
T Consensus 252 ~~~v~~~g~~~~~~~~~~~~d--~~v~ps~~E~~~~~~~EAma~g~PvI~s~~~----~~~e~i~~~-~~G~~~~~~--~ 322 (371)
T cd04962 252 QDDVLFLGKQDHVEELLSIAD--LFLLPSEKESFGLAALEAMACGVPVVASNAG----GIPEVVKHG-ETGFLVDVG--D 322 (371)
T ss_pred CceEEEecCcccHHHHHHhcC--EEEeCCCcCCCccHHHHHHHcCCCEEEeCCC----CchhhhcCC-CceEEcCCC--C
Confidence 345666676654 46678888 4442 223 35999999999999996543 344455554 567766543 4
Q ss_pred HHHHHhhh
Q 035856 269 KSGVLQSL 276 (278)
Q Consensus 269 ~~~l~~~i 276 (278)
.+++.+++
T Consensus 323 ~~~l~~~i 330 (371)
T cd04962 323 VEAMAEYA 330 (371)
T ss_pred HHHHHHHH
Confidence 55555554
No 87
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=87.00 E-value=1.2 Score=38.93 Aligned_cols=75 Identities=15% Similarity=0.120 Sum_probs=46.8
Q ss_pred CCCeEEecCcc-hh---hhcccccccEEEeeCC----chhHHHHHHhCcceeeccccCChhHHHHHHHHHhcceEEecCC
Q 035856 194 SGRGKIVLQAP-QT---QVLGHFSIGVFVIHSG----ANSVCESIANGVLMICRPFYGDHRMNARMVEEVWGIGVKVEGI 265 (278)
Q Consensus 194 ~~~~~v~~w~p-q~---~iL~~~~v~~fitHgG----~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l~~~ 265 (278)
..+....+|++ +. .+++.++ +++.... -++++||+++|+|+|+....+ ....+.+. +.|..++..
T Consensus 243 ~~~v~~~g~~~~~~~~~~~~~~ad--~~l~ps~~e~~g~~~~Eam~~g~PvI~~~~~~----~~e~~~~~-~~g~~~~~~ 315 (365)
T cd03825 243 PFPVHYLGSLNDDESLALIYSAAD--VFVVPSLQENFPNTAIEALACGTPVVAFDVGG----IPDIVDHG-VTGYLAKPG 315 (365)
T ss_pred CCceEecCCcCCHHHHHHHHHhCC--EEEeccccccccHHHHHHHhcCCCEEEecCCC----ChhheeCC-CceEEeCCC
Confidence 34555668888 43 4688888 6666432 378999999999999875422 22233333 466666543
Q ss_pred CcCHHHHHhhhh
Q 035856 266 LLTKSGVLQSLD 277 (278)
Q Consensus 266 ~~~~~~l~~~i~ 277 (278)
+.+++.+++.
T Consensus 316 --~~~~~~~~l~ 325 (365)
T cd03825 316 --DPEDLAEGIE 325 (365)
T ss_pred --CHHHHHHHHH
Confidence 4555555543
No 88
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
Probab=86.99 E-value=1.2 Score=38.53 Aligned_cols=75 Identities=16% Similarity=0.115 Sum_probs=48.1
Q ss_pred CCCeEEecCcchhh---hcccccccEEEe--eCCc-hhHHHHHHhCcceeeccccCChhHHHHHHHHHhcceEEecCCCc
Q 035856 194 SGRGKIVLQAPQTQ---VLGHFSIGVFVI--HSGA-NSVCESIANGVLMICRPFYGDHRMNARMVEEVWGIGVKVEGILL 267 (278)
Q Consensus 194 ~~~~~v~~w~pq~~---iL~~~~v~~fit--HgG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~ 267 (278)
.++..+.+++++.+ +++.+++-++-+ +-|+ .+++||+++|+|+|+....+ ....+.+. ..|..++.
T Consensus 223 ~~~v~~~G~~~~~~~~~~~~~~d~~v~ps~~~E~~~~~~lEAma~G~PvI~~~~~~----~~e~i~~~-~~g~l~~~--- 294 (335)
T cd03802 223 GPDIEYLGEVGGAEKAELLGNARALLFPILWEEPFGLVMIEAMACGTPVIAFRRGA----VPEVVEDG-VTGFLVDS--- 294 (335)
T ss_pred CCcEEEeCCCCHHHHHHHHHhCcEEEeCCcccCCcchHHHHHHhcCCCEEEeCCCC----chhheeCC-CcEEEeCC---
Confidence 46777779998854 578888444433 2344 58999999999999976532 22333332 36776653
Q ss_pred CHHHHHhhhh
Q 035856 268 TKSGVLQSLD 277 (278)
Q Consensus 268 ~~~~l~~~i~ 277 (278)
.+++.++++
T Consensus 295 -~~~l~~~l~ 303 (335)
T cd03802 295 -VEELAAAVA 303 (335)
T ss_pred -HHHHHHHHH
Confidence 566666553
No 89
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=86.88 E-value=1.8 Score=42.09 Aligned_cols=77 Identities=21% Similarity=0.228 Sum_probs=50.6
Q ss_pred CCCCeEEecCcch-hhhcccccccEEEe---eCCc-hhHHHHHHhCcceeeccccCChhHHHHHHHHHhcceEEecCCCc
Q 035856 193 TSGRGKIVLQAPQ-TQVLGHFSIGVFVI---HSGA-NSVCESIANGVLMICRPFYGDHRMNARMVEEVWGIGVKVEGILL 267 (278)
Q Consensus 193 ~~~~~~v~~w~pq-~~iL~~~~v~~fit---HgG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~ 267 (278)
..+++.+.+|.++ ..++..++ +|+. +-|+ ++++||+++|+|+|+....+ ....+.+. ..|.-++.+..
T Consensus 572 L~~~V~flG~~~dv~~ll~aaD--v~VlpS~~Egfp~vlLEAMA~G~PVVat~~gG----~~EiV~dg-~~GlLv~~~d~ 644 (694)
T PRK15179 572 MGERILFTGLSRRVGYWLTQFN--AFLLLSRFEGLPNVLIEAQFSGVPVVTTLAGG----AGEAVQEG-VTGLTLPADTV 644 (694)
T ss_pred CCCcEEEcCCcchHHHHHHhcC--EEEeccccccchHHHHHHHHcCCeEEEECCCC----hHHHccCC-CCEEEeCCCCC
Confidence 3466777687665 45677778 5553 4454 78999999999999987532 33445554 57888876655
Q ss_pred CHHHHHhhh
Q 035856 268 TKSGVLQSL 276 (278)
Q Consensus 268 ~~~~l~~~i 276 (278)
+.+++.+++
T Consensus 645 ~~~~La~aL 653 (694)
T PRK15179 645 TAPDVAEAL 653 (694)
T ss_pred ChHHHHHHH
Confidence 554544443
No 90
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=86.80 E-value=1.6 Score=37.92 Aligned_cols=76 Identities=18% Similarity=0.105 Sum_probs=48.7
Q ss_pred CCCeEEecCcch-hhhcccccccEEEee--CCc-hhHHHHHHhCcceeeccccCChhHHHHHHHHHhcceEEecCCCcCH
Q 035856 194 SGRGKIVLQAPQ-TQVLGHFSIGVFVIH--SGA-NSVCESIANGVLMICRPFYGDHRMNARMVEEVWGIGVKVEGILLTK 269 (278)
Q Consensus 194 ~~~~~v~~w~pq-~~iL~~~~v~~fitH--gG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~~ 269 (278)
.++..+.+|..+ ..++..+++..+-++ -|+ ++++||+++|+|+|+.-..+ ....+.+. +.|..++.+ +.
T Consensus 245 ~~~v~~~g~~~~~~~~l~~ad~~i~ps~~~e~~~~~l~EA~a~G~PvI~~~~~~----~~e~i~~~-~~g~~~~~~--~~ 317 (355)
T cd03819 245 QDRVTFVGHCSDMPAAYALADIVVSASTEPEAFGRTAVEAQAMGRPVIASDHGG----ARETVRPG-ETGLLVPPG--DA 317 (355)
T ss_pred cceEEEcCCcccHHHHHHhCCEEEecCCCCCCCchHHHHHHhcCCCEEEcCCCC----cHHHHhCC-CceEEeCCC--CH
Confidence 345666677432 457788885444342 233 68999999999999875432 34455554 578877654 56
Q ss_pred HHHHhhh
Q 035856 270 SGVLQSL 276 (278)
Q Consensus 270 ~~l~~~i 276 (278)
+++.++|
T Consensus 318 ~~l~~~i 324 (355)
T cd03819 318 EALAQAL 324 (355)
T ss_pred HHHHHHH
Confidence 6666665
No 91
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=86.70 E-value=1.4 Score=38.20 Aligned_cols=76 Identities=16% Similarity=0.191 Sum_probs=47.8
Q ss_pred CCCeEEe-cCcchh---hhcccccccEEEee-C--Cc-hhHHHHHHhCcceeeccccCChhHHHHHHHHHhcceEEecCC
Q 035856 194 SGRGKIV-LQAPQT---QVLGHFSIGVFVIH-S--GA-NSVCESIANGVLMICRPFYGDHRMNARMVEEVWGIGVKVEGI 265 (278)
Q Consensus 194 ~~~~~v~-~w~pq~---~iL~~~~v~~fitH-g--G~-~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l~~~ 265 (278)
.++.... .|+|+. .++..+++-.+-++ . |+ ++++||+++|+|+|+-+..+ ...+.+. +.|..++.+
T Consensus 246 ~~~v~~~~~~~~~~~~~~~~~~ad~~v~ps~~e~~~~~~~~~Ea~a~G~PvI~~~~~~-----~~~i~~~-~~g~~~~~~ 319 (366)
T cd03822 246 ADRVIFINRYLPDEELPELFSAADVVVLPYRSADQTQSGVLAYAIGFGKPVISTPVGH-----AEEVLDG-GTGLLVPPG 319 (366)
T ss_pred CCcEEEecCcCCHHHHHHHHhhcCEEEecccccccccchHHHHHHHcCCCEEecCCCC-----hheeeeC-CCcEEEcCC
Confidence 3455555 458875 56677773332222 2 33 57889999999999987643 2334454 677777654
Q ss_pred CcCHHHHHhhhh
Q 035856 266 LLTKSGVLQSLD 277 (278)
Q Consensus 266 ~~~~~~l~~~i~ 277 (278)
+.+++.+++.
T Consensus 320 --d~~~~~~~l~ 329 (366)
T cd03822 320 --DPAALAEAIR 329 (366)
T ss_pred --CHHHHHHHHH
Confidence 4666666653
No 92
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional
Probab=86.20 E-value=2.1 Score=37.84 Aligned_cols=76 Identities=14% Similarity=0.104 Sum_probs=48.1
Q ss_pred CCCCeEEecCcch--hh---hcccccccEEEeeC---C-chhHHHHHHhCcceeecc-ccCChhHHHHHHHHHhcceEEe
Q 035856 193 TSGRGKIVLQAPQ--TQ---VLGHFSIGVFVIHS---G-ANSVCESIANGVLMICRP-FYGDHRMNARMVEEVWGIGVKV 262 (278)
Q Consensus 193 ~~~~~~v~~w~pq--~~---iL~~~~v~~fitHg---G-~~s~~eal~~GvP~l~~P-~~~DQ~~na~~~~~~~g~G~~l 262 (278)
..++..+.+|+.+ .. .++.++ +||... | -++++||+++|+|+|+.- ..+ ....+.+. ..|.-+
T Consensus 234 l~~~v~f~G~~~~~~~~~~~~~~~~d--~~v~~s~~Egf~~~~lEAma~G~Pvv~s~~~~g----~~eiv~~~-~~G~lv 306 (359)
T PRK09922 234 IEQRIIWHGWQSQPWEVVQQKIKNVS--ALLLTSKFEGFPMTLLEAMSYGIPCISSDCMSG----PRDIIKPG-LNGELY 306 (359)
T ss_pred CCCeEEEecccCCcHHHHHHHHhcCc--EEEECCcccCcChHHHHHHHcCCCEEEeCCCCC----hHHHccCC-CceEEE
Confidence 3467777788743 22 344556 555422 2 378999999999999975 322 22345544 578777
Q ss_pred cCCCcCHHHHHhhhh
Q 035856 263 EGILLTKSGVLQSLD 277 (278)
Q Consensus 263 ~~~~~~~~~l~~~i~ 277 (278)
+.+ +.+++.++|.
T Consensus 307 ~~~--d~~~la~~i~ 319 (359)
T PRK09922 307 TPG--NIDEFVGKLN 319 (359)
T ss_pred CCC--CHHHHHHHHH
Confidence 654 6777777764
No 93
>PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A.
Probab=85.55 E-value=0.49 Score=43.45 Aligned_cols=62 Identities=18% Similarity=0.291 Sum_probs=30.8
Q ss_pred CCCeEEecCcchhhhc---ccccccEEEe---eCCchhHHHHHHhCcceeeccccCChh---HHHHHHHHHhcceE
Q 035856 194 SGRGKIVLQAPQTQVL---GHFSIGVFVI---HSGANSVCESIANGVLMICRPFYGDHR---MNARMVEEVWGIGV 260 (278)
Q Consensus 194 ~~~~~v~~w~pq~~iL---~~~~v~~fit---HgG~~s~~eal~~GvP~l~~P~~~DQ~---~na~~~~~~~g~G~ 260 (278)
+++..+.++.|+.+-| ...+ .++- .+|.++++|||++|||+|++| ++.. .-+..+... |+.-
T Consensus 341 ~~Ri~f~~~~~~~ehl~~~~~~D--I~LDT~p~nG~TTt~dALwmGVPvVTl~--G~~~~sR~~aSiL~~l-Gl~E 411 (468)
T PF13844_consen 341 PDRIIFSPVAPREEHLRRYQLAD--ICLDTFPYNGGTTTLDALWMGVPVVTLP--GETMASRVGASILRAL-GLPE 411 (468)
T ss_dssp GGGEEEEE---HHHHHHHGGG-S--EEE--SSS--SHHHHHHHHHT--EEB-----SSGGGSHHHHHHHHH-T-GG
T ss_pred hhhEEEcCCCCHHHHHHHhhhCC--EEeeCCCCCCcHHHHHHHHcCCCEEecc--CCCchhHHHHHHHHHc-CCch
Confidence 4566666777765544 3455 5553 467899999999999999999 4432 233344443 6543
No 94
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=85.08 E-value=1.3 Score=39.12 Aligned_cols=76 Identities=16% Similarity=0.150 Sum_probs=45.5
Q ss_pred CCeEEecCcch-hhhcccccccEEEee--CCchhHHHHHHhCcceeeccccCChhHHHHHHHHHhcceEEecCCCcCHHH
Q 035856 195 GRGKIVLQAPQ-TQVLGHFSIGVFVIH--SGANSVCESIANGVLMICRPFYGDHRMNARMVEEVWGIGVKVEGILLTKSG 271 (278)
Q Consensus 195 ~~~~v~~w~pq-~~iL~~~~v~~fitH--gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~~~~ 271 (278)
+++.+.+...+ ..++..+++-++-++ |--++++||+++|+|+|+....+ +...+.+. ..|..++.+ +.++
T Consensus 255 ~~v~~~g~~~~~~~~~~~adi~v~pS~~Eg~~~~~lEAma~G~Pvv~s~~~g----~~e~i~~~-~~g~~~~~~--d~~~ 327 (374)
T TIGR03088 255 HLVWLPGERDDVPALMQALDLFVLPSLAEGISNTILEAMASGLPVIATAVGG----NPELVQHG-VTGALVPPG--DAVA 327 (374)
T ss_pred ceEEEcCCcCCHHHHHHhcCEEEeccccccCchHHHHHHHcCCCEEEcCCCC----cHHHhcCC-CceEEeCCC--CHHH
Confidence 34444443322 467888883322233 22468999999999999977533 33444444 567777653 4566
Q ss_pred HHhhhh
Q 035856 272 VLQSLD 277 (278)
Q Consensus 272 l~~~i~ 277 (278)
+.++|.
T Consensus 328 la~~i~ 333 (374)
T TIGR03088 328 LARALQ 333 (374)
T ss_pred HHHHHH
Confidence 666653
No 95
>PRK10307 putative glycosyl transferase; Provisional
Probab=85.07 E-value=3.7 Score=37.00 Aligned_cols=76 Identities=20% Similarity=0.281 Sum_probs=49.1
Q ss_pred CCeEEecCcchhh---hcccccccEEEeeCCc------hhHHHHHHhCcceeeccccCChhHHHHHHHHHhcceEEecCC
Q 035856 195 GRGKIVLQAPQTQ---VLGHFSIGVFVIHSGA------NSVCESIANGVLMICRPFYGDHRMNARMVEEVWGIGVKVEGI 265 (278)
Q Consensus 195 ~~~~v~~w~pq~~---iL~~~~v~~fitHgG~------~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l~~~ 265 (278)
+|..+.+|+|+.+ +++.+++..+.+..+. +.+.|++++|+|+|+...-+.. ....+. +.|+.++.+
T Consensus 284 ~~v~f~G~~~~~~~~~~~~~aDi~v~ps~~e~~~~~~p~kl~eama~G~PVi~s~~~g~~--~~~~i~---~~G~~~~~~ 358 (412)
T PRK10307 284 PNVHFLPLQPYDRLPALLKMADCHLLPQKAGAADLVLPSKLTNMLASGRNVVATAEPGTE--LGQLVE---GIGVCVEPE 358 (412)
T ss_pred CceEEeCCCCHHHHHHHHHhcCEeEEeeccCcccccCcHHHHHHHHcCCCEEEEeCCCch--HHHHHh---CCcEEeCCC
Confidence 4666678998764 6788886555555332 3468999999999998754321 111222 577777654
Q ss_pred CcCHHHHHhhhh
Q 035856 266 LLTKSGVLQSLD 277 (278)
Q Consensus 266 ~~~~~~l~~~i~ 277 (278)
+.++++++|+
T Consensus 359 --d~~~la~~i~ 368 (412)
T PRK10307 359 --SVEALVAAIA 368 (412)
T ss_pred --CHHHHHHHHH
Confidence 4667776664
No 96
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=83.93 E-value=2.5 Score=37.52 Aligned_cols=74 Identities=12% Similarity=0.043 Sum_probs=47.9
Q ss_pred CCCeEEecCcchh---hhcccccccEEEee---CCc-hhHHHHHHhCcceeeccccCChhHHHHHHHHHhcceEEecCCC
Q 035856 194 SGRGKIVLQAPQT---QVLGHFSIGVFVIH---SGA-NSVCESIANGVLMICRPFYGDHRMNARMVEEVWGIGVKVEGIL 266 (278)
Q Consensus 194 ~~~~~v~~w~pq~---~iL~~~~v~~fitH---gG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l~~~~ 266 (278)
.++..+.+++|+. .++..++ +++.. -|+ .+++||+++|+|+|+.-..+ ....+.+. +.|..++.
T Consensus 279 ~~~V~f~g~~~~~~~~~~l~~ad--~~l~~s~~E~~g~~~lEAma~G~PvI~s~~~~----~~e~i~~~-~~g~~~~~-- 349 (392)
T cd03805 279 EDQVIFLPSISDSQKELLLSSAR--ALLYTPSNEHFGIVPLEAMYAGKPVIACNSGG----PLETVVDG-ETGFLCEP-- 349 (392)
T ss_pred CceEEEeCCCChHHHHHHHhhCe--EEEECCCcCCCCchHHHHHHcCCCEEEECCCC----cHHHhccC-CceEEeCC--
Confidence 4567778999886 4678888 55532 222 57899999999999975433 23345553 56766642
Q ss_pred cCHHHHHhhhh
Q 035856 267 LTKSGVLQSLD 277 (278)
Q Consensus 267 ~~~~~l~~~i~ 277 (278)
+.+++.++|.
T Consensus 350 -~~~~~a~~i~ 359 (392)
T cd03805 350 -TPEEFAEAML 359 (392)
T ss_pred -CHHHHHHHHH
Confidence 4566655553
No 97
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=83.62 E-value=3 Score=37.82 Aligned_cols=71 Identities=14% Similarity=0.119 Sum_probs=47.3
Q ss_pred CeEEe-cCcchhh---hcccccccEEEe-e-----CC-chhHHHHHHhCcceeeccccCChhHHHHHHHHHhcceEEecC
Q 035856 196 RGKIV-LQAPQTQ---VLGHFSIGVFVI-H-----SG-ANSVCESIANGVLMICRPFYGDHRMNARMVEEVWGIGVKVEG 264 (278)
Q Consensus 196 ~~~v~-~w~pq~~---iL~~~~v~~fit-H-----gG-~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l~~ 264 (278)
+.... +|+|..+ +|..++ +|+. | -| -+.++||+++|+|+|+... ......+++. +.|..++
T Consensus 295 ~~~~~~g~~~~~~~~~~l~~aD--v~v~~~~~~~~~~~p~~~~Eama~G~PVI~s~~----~~~~eiv~~~-~~G~lv~- 366 (415)
T cd03816 295 KVTIRTPWLSAEDYPKLLASAD--LGVSLHTSSSGLDLPMKVVDMFGCGLPVCALDF----KCIDELVKHG-ENGLVFG- 366 (415)
T ss_pred cEEEEcCcCCHHHHHHHHHhCC--EEEEccccccccCCcHHHHHHHHcCCCEEEeCC----CCHHHHhcCC-CCEEEEC-
Confidence 44444 6888655 477888 4442 1 12 3479999999999999654 2344566665 6888873
Q ss_pred CCcCHHHHHhhhh
Q 035856 265 ILLTKSGVLQSLD 277 (278)
Q Consensus 265 ~~~~~~~l~~~i~ 277 (278)
+.+++.++|.
T Consensus 367 ---d~~~la~~i~ 376 (415)
T cd03816 367 ---DSEELAEQLI 376 (415)
T ss_pred ---CHHHHHHHHH
Confidence 5778877764
No 98
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=81.21 E-value=3.2 Score=36.77 Aligned_cols=69 Identities=16% Similarity=0.120 Sum_probs=44.6
Q ss_pred cCcchh---hhcccccccEEEee---CC-chhHHHHHHhCcceeeccccCChhHHHHHHHHHhcceEEecCCCcCH----
Q 035856 201 LQAPQT---QVLGHFSIGVFVIH---SG-ANSVCESIANGVLMICRPFYGDHRMNARMVEEVWGIGVKVEGILLTK---- 269 (278)
Q Consensus 201 ~w~pq~---~iL~~~~v~~fitH---gG-~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~~---- 269 (278)
+++++. .++.+++ +|+.- -| -.+++||+++|+|+|+.... .....+.+. +.|..++.+..+.
T Consensus 267 ~~~~~~~~~~~~~~aD--v~v~ps~~e~~g~~~lEA~a~G~PvI~s~~~----~~~e~i~~~-~~G~~~~~~~~~~~~~~ 339 (388)
T TIGR02149 267 KMLPKEELVELLSNAE--VFVCPSIYEPLGIVNLEAMACGTPVVASATG----GIPEVVVDG-ETGFLVPPDNSDADGFQ 339 (388)
T ss_pred CCCCHHHHHHHHHhCC--EEEeCCccCCCChHHHHHHHcCCCEEEeCCC----CHHHHhhCC-CceEEcCCCCCcccchH
Confidence 577764 4578888 55542 22 35779999999999997643 344555555 6788887653322
Q ss_pred HHHHhhh
Q 035856 270 SGVLQSL 276 (278)
Q Consensus 270 ~~l~~~i 276 (278)
+++.++|
T Consensus 340 ~~l~~~i 346 (388)
T TIGR02149 340 AELAKAI 346 (388)
T ss_pred HHHHHHH
Confidence 5555555
No 99
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=80.64 E-value=2.7 Score=36.53 Aligned_cols=72 Identities=18% Similarity=0.193 Sum_probs=42.6
Q ss_pred CCCeEEecCcch-hhhcccccccEEEeeC---C-chhHHHHHHhCcceeeccccCChhHHHHHHHHHhcceEEecCCCcC
Q 035856 194 SGRGKIVLQAPQ-TQVLGHFSIGVFVIHS---G-ANSVCESIANGVLMICRPFYGDHRMNARMVEEVWGIGVKVEGILLT 268 (278)
Q Consensus 194 ~~~~~v~~w~pq-~~iL~~~~v~~fitHg---G-~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~ 268 (278)
.++..+.++..+ ..++..++ +|+.-. | -++++||+++|+|+|+.. ...+...+.+. |.. +..+ +
T Consensus 244 ~~~v~~~g~~~~~~~~~~~ad--~~v~~s~~e~~~~~~~Ea~a~G~PvI~~~----~~~~~e~i~~~-g~~--~~~~--~ 312 (360)
T cd04951 244 SNRVKLLGLRDDIAAYYNAAD--LFVLSSAWEGFGLVVAEAMACELPVVATD----AGGVREVVGDS-GLI--VPIS--D 312 (360)
T ss_pred CCcEEEecccccHHHHHHhhc--eEEecccccCCChHHHHHHHcCCCEEEec----CCChhhEecCC-ceE--eCCC--C
Confidence 345666666544 56788888 444422 2 367889999999999854 33444444442 443 3332 4
Q ss_pred HHHHHhhh
Q 035856 269 KSGVLQSL 276 (278)
Q Consensus 269 ~~~l~~~i 276 (278)
.+++.+++
T Consensus 313 ~~~~~~~i 320 (360)
T cd04951 313 PEALANKI 320 (360)
T ss_pred HHHHHHHH
Confidence 55555554
No 100
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=80.02 E-value=4.2 Score=36.23 Aligned_cols=73 Identities=11% Similarity=0.179 Sum_probs=45.2
Q ss_pred CCCeEEecCcchhh---hcccccccEEEe------eCCc-hhHHHHHHhCcceeeccccCChhHHHHHHHHHhcceEEec
Q 035856 194 SGRGKIVLQAPQTQ---VLGHFSIGVFVI------HSGA-NSVCESIANGVLMICRPFYGDHRMNARMVEEVWGIGVKVE 263 (278)
Q Consensus 194 ~~~~~v~~w~pq~~---iL~~~~v~~fit------HgG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l~ 263 (278)
.+|+...+++|+.+ .+.++++..+-. .++. +-++|++++|+|+|+.++ ...+... + |..+.
T Consensus 253 ~~nV~~~G~~~~~~l~~~l~~~Dv~l~P~~~~~~~~~~~P~Kl~EylA~G~PVVat~~-------~~~~~~~-~-~~~~~ 323 (373)
T cd04950 253 LPNVHYLGPKPYKELPAYLAGFDVAILPFRLNELTRATSPLKLFEYLAAGKPVVATPL-------PEVRRYE-D-EVVLI 323 (373)
T ss_pred CCCEEEeCCCCHHHHHHHHHhCCEEecCCccchhhhcCCcchHHHHhccCCCEEecCc-------HHHHhhc-C-cEEEe
Confidence 36788889998765 577888544322 2232 458999999999998763 1222222 3 33333
Q ss_pred CCCcCHHHHHhhhh
Q 035856 264 GILLTKSGVLQSLD 277 (278)
Q Consensus 264 ~~~~~~~~l~~~i~ 277 (278)
.+ +.+++.++|+
T Consensus 324 ~~--d~~~~~~ai~ 335 (373)
T cd04950 324 AD--DPEEFVAAIE 335 (373)
T ss_pred CC--CHHHHHHHHH
Confidence 32 5777777764
No 101
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=79.83 E-value=4.9 Score=37.16 Aligned_cols=76 Identities=16% Similarity=0.195 Sum_probs=46.3
Q ss_pred CCCeEEecCcchhhhcccccccEEEeeC---C-chhHHHHHHhCcceeeccccCChhHHHHHHHHH----h-cceEEecC
Q 035856 194 SGRGKIVLQAPQTQVLGHFSIGVFVIHS---G-ANSVCESIANGVLMICRPFYGDHRMNARMVEEV----W-GIGVKVEG 264 (278)
Q Consensus 194 ~~~~~v~~w~pq~~iL~~~~v~~fitHg---G-~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~----~-g~G~~l~~ 264 (278)
.++..+.+...-.+++..++ +|+... | -++++||+++|+|+|+-.. .-....+.+. . ..|..++.
T Consensus 353 ~~~V~f~G~~~v~~~l~~aD--v~vlpS~~Eg~p~~vlEAma~G~PVVatd~----g~~~elv~~~~~~~~g~~G~lv~~ 426 (475)
T cd03813 353 EDNVKFTGFQNVKEYLPKLD--VLVLTSISEGQPLVILEAMAAGIPVVATDV----GSCRELIEGADDEALGPAGEVVPP 426 (475)
T ss_pred CCeEEEcCCccHHHHHHhCC--EEEeCchhhcCChHHHHHHHcCCCEEECCC----CChHHHhcCCcccccCCceEEECC
Confidence 35555556444456777777 554322 2 3689999999999999543 3334444441 0 26777765
Q ss_pred CCcCHHHHHhhhh
Q 035856 265 ILLTKSGVLQSLD 277 (278)
Q Consensus 265 ~~~~~~~l~~~i~ 277 (278)
+ +.+++.+++.
T Consensus 427 ~--d~~~la~ai~ 437 (475)
T cd03813 427 A--DPEALARAIL 437 (475)
T ss_pred C--CHHHHHHHHH
Confidence 3 4666666653
No 102
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=78.15 E-value=6.6 Score=34.09 Aligned_cols=76 Identities=8% Similarity=-0.051 Sum_probs=45.6
Q ss_pred CCCeEEecCcch-hhhcccccccEEEee--CCchhHHHHHHhCcceeeccccCChhHHHHHHHHHhcceEEecCCCcCHH
Q 035856 194 SGRGKIVLQAPQ-TQVLGHFSIGVFVIH--SGANSVCESIANGVLMICRPFYGDHRMNARMVEEVWGIGVKVEGILLTKS 270 (278)
Q Consensus 194 ~~~~~v~~w~pq-~~iL~~~~v~~fitH--gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~~~ 270 (278)
.++....++..+ .+++..+++.++-+. |--++++||+++|+|+|+--..+ ....+.+ +.|..+..+ +.+
T Consensus 248 ~~~v~~~g~~~~~~~~~~~adi~v~ps~~E~~~~~~lEAma~G~PvI~s~~~~----~~~~i~~--~~~~~~~~~--~~~ 319 (358)
T cd03812 248 EDKVIFLGVRNDVPELLQAMDVFLFPSLYEGLPLVLIEAQASGLPCILSDTIT----KEVDLTD--LVKFLSLDE--SPE 319 (358)
T ss_pred CCcEEEecccCCHHHHHHhcCEEEecccccCCCHHHHHHHHhCCCEEEEcCCc----hhhhhcc--CccEEeCCC--CHH
Confidence 455666666433 567888884333222 33478999999999999976544 2223333 455544432 467
Q ss_pred HHHhhhh
Q 035856 271 GVLQSLD 277 (278)
Q Consensus 271 ~l~~~i~ 277 (278)
+++++|.
T Consensus 320 ~~a~~i~ 326 (358)
T cd03812 320 IWAEEIL 326 (358)
T ss_pred HHHHHHH
Confidence 7777664
No 103
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=77.91 E-value=3.6 Score=35.80 Aligned_cols=46 Identities=22% Similarity=0.262 Sum_probs=33.1
Q ss_pred CCCeEEecCcchhh---hcccccccEEEeeC----Cc-hhHHHHHHhCcceeeccc
Q 035856 194 SGRGKIVLQAPQTQ---VLGHFSIGVFVIHS----GA-NSVCESIANGVLMICRPF 241 (278)
Q Consensus 194 ~~~~~v~~w~pq~~---iL~~~~v~~fitHg----G~-~s~~eal~~GvP~l~~P~ 241 (278)
.++..+.+++++.+ .+..++ .++.+. |+ ++++||+++|+|+|+...
T Consensus 247 ~~~V~~~g~~~~~~~~~~~~~ad--~~v~ps~~~e~~~~~~~EAma~G~PvI~s~~ 300 (363)
T cd04955 247 DPRIIFVGPIYDQELLELLRYAA--LFYLHGHSVGGTNPSLLEAMAYGCPVLASDN 300 (363)
T ss_pred CCcEEEccccChHHHHHHHHhCC--EEEeCCccCCCCChHHHHHHHcCCCEEEecC
Confidence 45677779999875 455666 444433 33 579999999999998764
No 104
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=77.49 E-value=3.3 Score=37.18 Aligned_cols=47 Identities=17% Similarity=0.265 Sum_probs=34.4
Q ss_pred CCCeEEecCcchhh---hcccccccEEEe---eCCc-hhHHHHHHhCcceeecccc
Q 035856 194 SGRGKIVLQAPQTQ---VLGHFSIGVFVI---HSGA-NSVCESIANGVLMICRPFY 242 (278)
Q Consensus 194 ~~~~~v~~w~pq~~---iL~~~~v~~fit---HgG~-~s~~eal~~GvP~l~~P~~ 242 (278)
.++..+.+|+|+.+ +++.++ +|+. +-|+ .+++||+++|+|+|+....
T Consensus 249 ~~~v~~~G~~~~~~~~~~l~~ad--~~v~pS~~E~~g~~~~EAma~G~PVI~s~~g 302 (398)
T cd03796 249 QDRVELLGAVPHERVRDVLVQGH--IFLNTSLTEAFCIAIVEAASCGLLVVSTRVG 302 (398)
T ss_pred CCeEEEeCCCCHHHHHHHHHhCC--EEEeCChhhccCHHHHHHHHcCCCEEECCCC
Confidence 45566779998754 677788 5543 2244 4999999999999998764
No 105
>COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]
Probab=76.71 E-value=3.1 Score=38.96 Aligned_cols=49 Identities=18% Similarity=0.276 Sum_probs=34.1
Q ss_pred CCeEEecCcchhhhc---ccccccEEEe---eCCchhHHHHHHhCcceeeccccCChhH
Q 035856 195 GRGKIVLQAPQTQVL---GHFSIGVFVI---HSGANSVCESIANGVLMICRPFYGDHRM 247 (278)
Q Consensus 195 ~~~~v~~w~pq~~iL---~~~~v~~fit---HgG~~s~~eal~~GvP~l~~P~~~DQ~~ 247 (278)
++-.+.+-.|...-+ .-++ .|+- -+|..|+.|+|..|||+|+++ |+|+.
T Consensus 489 eRL~f~p~~~~~~h~a~~~iAD--lvLDTyPY~g~TTa~daLwm~vPVlT~~--G~~Fa 543 (620)
T COG3914 489 ERLRFLPPAPNEDHRARYGIAD--LVLDTYPYGGHTTASDALWMGVPVLTRV--GEQFA 543 (620)
T ss_pred hheeecCCCCCHHHHHhhchhh--eeeecccCCCccchHHHHHhcCceeeec--cHHHH
Confidence 344444555544333 3344 5554 688999999999999999997 88884
No 106
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.
Probab=74.83 E-value=4.7 Score=34.89 Aligned_cols=48 Identities=17% Similarity=0.081 Sum_probs=33.2
Q ss_pred CCCeEEecCcchh---hhcccccccEEEee--CCchhHHHHHHhCcceeeccc
Q 035856 194 SGRGKIVLQAPQT---QVLGHFSIGVFVIH--SGANSVCESIANGVLMICRPF 241 (278)
Q Consensus 194 ~~~~~v~~w~pq~---~iL~~~~v~~fitH--gG~~s~~eal~~GvP~l~~P~ 241 (278)
.++..+.+|+|+. .++..+++..+-+. +.-++++||+++|+|+|+-..
T Consensus 252 ~~~v~~~g~~~~~~~~~~~~~~d~~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~ 304 (365)
T cd03809 252 GDRVRFLGYVSDEELAALYRGARAFVFPSLYEGFGLPVLEAMACGTPVIASNI 304 (365)
T ss_pred CCeEEECCCCChhHHHHHHhhhhhhcccchhccCCCCHHHHhcCCCcEEecCC
Confidence 4566777999886 45777774332221 223579999999999999654
No 107
>PHA01633 putative glycosyl transferase group 1
Probab=72.63 E-value=11 Score=33.34 Aligned_cols=80 Identities=15% Similarity=0.138 Sum_probs=48.2
Q ss_pred CCCCeEEe---cCcchh---hhcccccccEEEee---CCc-hhHHHHHHhCcceeeccc------cCCh------hHHHH
Q 035856 193 TSGRGKIV---LQAPQT---QVLGHFSIGVFVIH---SGA-NSVCESIANGVLMICRPF------YGDH------RMNAR 250 (278)
Q Consensus 193 ~~~~~~v~---~w~pq~---~iL~~~~v~~fitH---gG~-~s~~eal~~GvP~l~~P~------~~DQ------~~na~ 250 (278)
.+++..+. +++++. .+++.++ +|+.- =|+ ++++||+++|+|+|+--. .+|+ ..+..
T Consensus 199 l~~~V~f~g~~G~~~~~dl~~~y~~aD--ifV~PS~~EgfGlvlLEAMA~G~PVVas~~~~l~Ei~g~~~~~Li~~~~v~ 276 (335)
T PHA01633 199 VPANVHFVAEFGHNSREYIFAFYGAMD--FTIVPSGTEGFGMPVLESMAMGTPVIHQLMPPLDEFTSWQWNLLIKSSKVE 276 (335)
T ss_pred CCCcEEEEecCCCCCHHHHHHHHHhCC--EEEECCccccCCHHHHHHHHcCCCEEEccCCCceeecCCccceeeCCCCHH
Confidence 35566665 455654 5677788 67753 244 578899999999998633 3333 12222
Q ss_pred HHH--HHhcceEEecCCCcCHHHHHhhhh
Q 035856 251 MVE--EVWGIGVKVEGILLTKSGVLQSLD 277 (278)
Q Consensus 251 ~~~--~~~g~G~~l~~~~~~~~~l~~~i~ 277 (278)
... +. |.|..++. .++++++++++
T Consensus 277 ~~~~~~~-g~g~~~~~--~d~~~la~ai~ 302 (335)
T PHA01633 277 EYYDKEH-GQKWKIHK--FQIEDMANAII 302 (335)
T ss_pred HhcCccc-CceeeecC--CCHHHHHHHHH
Confidence 222 23 56666653 46777777764
No 108
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=70.79 E-value=7.8 Score=30.80 Aligned_cols=49 Identities=24% Similarity=0.188 Sum_probs=34.0
Q ss_pred CCCeEEecCcchh----hhcccccccEEEeeCC----chhHHHHHHhCcceeeccccCC
Q 035856 194 SGRGKIVLQAPQT----QVLGHFSIGVFVIHSG----ANSVCESIANGVLMICRPFYGD 244 (278)
Q Consensus 194 ~~~~~v~~w~pq~----~iL~~~~v~~fitHgG----~~s~~eal~~GvP~l~~P~~~D 244 (278)
.+|..+.+++++. .++..++ ++++-.. -++++||+++|+|+|+-+.-+.
T Consensus 160 ~~~v~~~~~~~~~~~~~~~~~~~d--i~l~~~~~e~~~~~~~Eam~~g~pvi~s~~~~~ 216 (229)
T cd01635 160 LDRVIFLGGLDPEELLALLLAAAD--VFVLPSLREGFGLVVLEAMACGLPVIATDVGGP 216 (229)
T ss_pred cccEEEeCCCCcHHHHHHHhhcCC--EEEecccccCcChHHHHHHhCCCCEEEcCCCCc
Confidence 4677777876332 2334477 6666554 5899999999999999876443
No 109
>PF06925 MGDG_synth: Monogalactosyldiacylglycerol (MGDG) synthase; InterPro: IPR009695 This entry represents a conserved region of approximately 180 residues found towirds the N terminus of a number of plant and bacterial diacylglycerol glucosyltransferases, such as monogalactosyldiacylglycerol synthase [].; GO: 0016758 transferase activity, transferring hexosyl groups, 0009247 glycolipid biosynthetic process
Probab=70.64 E-value=18 Score=28.24 Aligned_cols=42 Identities=12% Similarity=0.158 Sum_probs=26.0
Q ss_pred HHHHHHHHHHcCCCCccEEEeCCCchhHHHH-----HHHc-CCCeEeEeC
Q 035856 42 FKKGLDAAVSKTGRKISCFLTDAFLTFSGEM-----ARDM-HIPWFPVFV 85 (278)
Q Consensus 42 l~~~l~~l~~~~~~~~d~vI~D~~~~~~~~v-----A~~l-gIP~v~~~~ 85 (278)
+.+.+.+++++. +||+||+-..+.....+ ...+ ++|.+.+.|
T Consensus 77 ~~~~l~~~l~~~--~PD~IIsThp~~~~~~l~~lk~~~~~~~~p~~tvvT 124 (169)
T PF06925_consen 77 FARRLIRLLREF--QPDLIISTHPFPAQVPLSRLKRRGRLPNIPVVTVVT 124 (169)
T ss_pred HHHHHHHHHhhc--CCCEEEECCcchhhhHHHHHHHhhcccCCcEEEEEc
Confidence 444566666664 99999999876443312 2234 578776655
No 110
>PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=69.62 E-value=27 Score=33.34 Aligned_cols=68 Identities=13% Similarity=0.079 Sum_probs=40.7
Q ss_pred hhhcccccccEEEeeCCchhHHHHHHhCcceeeccc-cCChhHHHHHHHHH--hc-------ceEEe----c--CCCcCH
Q 035856 206 TQVLGHFSIGVFVIHSGANSVCESIANGVLMICRPF-YGDHRMNARMVEEV--WG-------IGVKV----E--GILLTK 269 (278)
Q Consensus 206 ~~iL~~~~v~~fitHgG~~s~~eal~~GvP~l~~P~-~~DQ~~na~~~~~~--~g-------~G~~l----~--~~~~~~ 269 (278)
.++++.++ +.+.-+| .-|+|+...|+||++.=- ..=-+..++++.+. .= +|.++ - .+.+|+
T Consensus 483 ~~~m~aaD--~aLaaSG-TaTLEaAL~g~PmVV~YK~s~Lty~Iak~Lvki~i~yIsLpNIIagr~VvPEllqgQ~~~tp 559 (608)
T PRK01021 483 YELMRECD--CALAKCG-TIVLETALNQTPTIVTCQLRPFDTFLAKYIFKIILPAYSLPNIILGSTIFPEFIGGKKDFQP 559 (608)
T ss_pred HHHHHhcC--eeeecCC-HHHHHHHHhCCCEEEEEecCHHHHHHHHHHHhccCCeeehhHHhcCCCcchhhcCCcccCCH
Confidence 45677777 7777777 568999999999988521 11123445555540 01 12222 1 246778
Q ss_pred HHHHhhh
Q 035856 270 SGVLQSL 276 (278)
Q Consensus 270 ~~l~~~i 276 (278)
++|.+++
T Consensus 560 e~La~~l 566 (608)
T PRK01021 560 EEVAAAL 566 (608)
T ss_pred HHHHHHH
Confidence 8887764
No 111
>PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria. This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important.
Probab=68.00 E-value=58 Score=25.70 Aligned_cols=42 Identities=7% Similarity=0.004 Sum_probs=33.9
Q ss_pred HHHHHHHHHHcCCCCccEEEeCCCchhHHHHHHHc-CCCeEeEe
Q 035856 42 FKKGLDAAVSKTGRKISCFLTDAFLTFSGEMARDM-HIPWFPVF 84 (278)
Q Consensus 42 l~~~l~~l~~~~~~~~d~vI~D~~~~~~~~vA~~l-gIP~v~~~ 84 (278)
....+.+|.++ |-.||+||...-+..+..+.+.+ ++|.+.|+
T Consensus 53 v~~a~~~L~~~-Gf~PDvI~~H~GWGe~Lflkdv~P~a~li~Y~ 95 (171)
T PF12000_consen 53 VARAARQLRAQ-GFVPDVIIAHPGWGETLFLKDVFPDAPLIGYF 95 (171)
T ss_pred HHHHHHHHHHc-CCCCCEEEEcCCcchhhhHHHhCCCCcEEEEE
Confidence 45556666554 78999999998888888999999 89999885
No 112
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=67.57 E-value=14 Score=34.98 Aligned_cols=65 Identities=23% Similarity=0.188 Sum_probs=43.5
Q ss_pred CCCeEEecCcch-hhhcccccccEEEe---eCC-chhHHHHHHhCcceeeccccCChhHHHHHHHHHhcceEEecCC
Q 035856 194 SGRGKIVLQAPQ-TQVLGHFSIGVFVI---HSG-ANSVCESIANGVLMICRPFYGDHRMNARMVEEVWGIGVKVEGI 265 (278)
Q Consensus 194 ~~~~~v~~w~pq-~~iL~~~~v~~fit---HgG-~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l~~~ 265 (278)
.+++.+.+|..+ ..++..++ +|+. +-| -++++||+++|+|+|+.... -+...+.+. ..|..++.+
T Consensus 454 ~d~V~FlG~~~Dv~~~LaaAD--VfVlPS~~EGfp~vlLEAMA~GlPVVATdvG----G~~EiV~dG-~nG~LVp~~ 523 (578)
T PRK15490 454 LERILFVGASRDVGYWLQKMN--VFILFSRYEGLPNVLIEAQMVGVPVISTPAG----GSAECFIEG-VSGFILDDA 523 (578)
T ss_pred CCcEEECCChhhHHHHHHhCC--EEEEcccccCccHHHHHHHHhCCCEEEeCCC----CcHHHcccC-CcEEEECCC
Confidence 466767677543 45678888 6664 234 47999999999999987653 234455554 567777543
No 113
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=67.43 E-value=2.2 Score=37.77 Aligned_cols=71 Identities=15% Similarity=0.169 Sum_probs=42.1
Q ss_pred CCeEEecCcc---hhhhcccccccEEEeeCCchhHH-HHHHhCcceeeccccCChhHHHHHHHHHhcceEEecCCCcCHH
Q 035856 195 GRGKIVLQAP---QTQVLGHFSIGVFVIHSGANSVC-ESIANGVLMICRPFYGDHRMNARMVEEVWGIGVKVEGILLTKS 270 (278)
Q Consensus 195 ~~~~v~~w~p---q~~iL~~~~v~~fitHgG~~s~~-eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~~~ 270 (278)
+|..+++-.+ ...+|.+++ ++||-.| ++. ||.+.|+|+|.+=-.++.+ .- ... |-.+-+. .+.+
T Consensus 239 ~~v~~~~~l~~~~~l~ll~~a~--~vvgdSs--GI~eEa~~lg~P~v~iR~~geRq---e~-r~~-~~nvlv~---~~~~ 306 (346)
T PF02350_consen 239 DNVRLIEPLGYEEYLSLLKNAD--LVVGDSS--GIQEEAPSLGKPVVNIRDSGERQ---EG-RER-GSNVLVG---TDPE 306 (346)
T ss_dssp TTEEEE----HHHHHHHHHHES--EEEESSH--HHHHHGGGGT--EEECSSS-S-H---HH-HHT-TSEEEET---SSHH
T ss_pred CCEEEECCCCHHHHHHHHhcce--EEEEcCc--cHHHHHHHhCCeEEEecCCCCCH---HH-Hhh-cceEEeC---CCHH
Confidence 4777765444 456788999 9999999 677 9999999999982212221 11 122 4444433 4677
Q ss_pred HHHhhhh
Q 035856 271 GVLQSLD 277 (278)
Q Consensus 271 ~l~~~i~ 277 (278)
+|.++++
T Consensus 307 ~I~~ai~ 313 (346)
T PF02350_consen 307 AIIQAIE 313 (346)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7777764
No 114
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases. ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.
Probab=64.16 E-value=11 Score=34.17 Aligned_cols=73 Identities=21% Similarity=0.241 Sum_probs=45.7
Q ss_pred CCCeEEecCcchhh---hcccccccEEEe-----eCCchhHHHHHHhCcceeeccccCChhHHHHHHH---HHhcceEEe
Q 035856 194 SGRGKIVLQAPQTQ---VLGHFSIGVFVI-----HSGANSVCESIANGVLMICRPFYGDHRMNARMVE---EVWGIGVKV 262 (278)
Q Consensus 194 ~~~~~v~~w~pq~~---iL~~~~v~~fit-----HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~---~~~g~G~~l 262 (278)
.+++.+.+++|+.+ +|..++ ++|+ |-| .+++||+++|+|+|+.-..+.- ...+. +. +.|.-.
T Consensus 304 ~~~V~f~g~v~~~~l~~~l~~ad--v~v~~s~~E~Fg-i~~lEAMa~G~pvIa~~~ggp~---~~iv~~~~~g-~~G~l~ 376 (419)
T cd03806 304 EDKVEFVVNAPFEELLEELSTAS--IGLHTMWNEHFG-IGVVEYMAAGLIPLAHASGGPL---LDIVVPWDGG-PTGFLA 376 (419)
T ss_pred CCeEEEecCCCHHHHHHHHHhCe--EEEECCccCCcc-cHHHHHHHcCCcEEEEcCCCCc---hheeeccCCC-CceEEe
Confidence 45677778888764 677788 5553 344 4789999999999986543311 11222 23 467654
Q ss_pred cCCCcCHHHHHhhhh
Q 035856 263 EGILLTKSGVLQSLD 277 (278)
Q Consensus 263 ~~~~~~~~~l~~~i~ 277 (278)
. +.+++.+++.
T Consensus 377 ~----d~~~la~ai~ 387 (419)
T cd03806 377 S----TAEEYAEAIE 387 (419)
T ss_pred C----CHHHHHHHHH
Confidence 2 5666766654
No 115
>COG0299 PurN Folate-dependent phosphoribosylglycinamide formyltransferase PurN [Nucleotide transport and metabolism]
Probab=60.46 E-value=21 Score=28.81 Aligned_cols=44 Identities=18% Similarity=0.129 Sum_probs=32.7
Q ss_pred HHHHHHHHHHc-CCCCccEEEeCCCchhHHHHHHHcCCCeEeEeC
Q 035856 42 FKKGLDAAVSK-TGRKISCFLTDAFLTFSGEMARDMHIPWFPVFV 85 (278)
Q Consensus 42 l~~~l~~l~~~-~~~~~d~vI~D~~~~~~~~vA~~lgIP~v~~~~ 85 (278)
|+.+++++... ....+.+||+|---..+..-|++.|||.+.+..
T Consensus 14 lqaiida~~~~~~~a~i~~Visd~~~A~~lerA~~~gIpt~~~~~ 58 (200)
T COG0299 14 LQAIIDAIKGGKLDAEIVAVISDKADAYALERAAKAGIPTVVLDR 58 (200)
T ss_pred HHHHHHHHhcCCCCcEEEEEEeCCCCCHHHHHHHHcCCCEEEecc
Confidence 44555554321 123799999999888899999999999988754
No 116
>PLN02949 transferase, transferring glycosyl groups
Probab=56.49 E-value=22 Score=32.90 Aligned_cols=47 Identities=19% Similarity=0.111 Sum_probs=33.5
Q ss_pred CCCeEEecCcchhh---hcccccccEEEe---eCCc-hhHHHHHHhCcceeecccc
Q 035856 194 SGRGKIVLQAPQTQ---VLGHFSIGVFVI---HSGA-NSVCESIANGVLMICRPFY 242 (278)
Q Consensus 194 ~~~~~v~~w~pq~~---iL~~~~v~~fit---HgG~-~s~~eal~~GvP~l~~P~~ 242 (278)
.++....+++|+.+ +|.+++ +++. +=|+ .+++||+++|+|+|+....
T Consensus 334 ~~~V~f~g~v~~~el~~ll~~a~--~~v~~s~~E~FGivvlEAMA~G~PVIa~~~g 387 (463)
T PLN02949 334 DGDVEFHKNVSYRDLVRLLGGAV--AGLHSMIDEHFGISVVEYMAAGAVPIAHNSA 387 (463)
T ss_pred CCcEEEeCCCCHHHHHHHHHhCc--EEEeCCccCCCChHHHHHHHcCCcEEEeCCC
Confidence 45666778888764 577787 5553 1223 4799999999999997653
No 117
>PRK10125 putative glycosyl transferase; Provisional
Probab=55.51 E-value=24 Score=31.92 Aligned_cols=51 Identities=22% Similarity=0.235 Sum_probs=33.6
Q ss_pred hhcccccccEEEeeCC----chhHHHHHHhCcceeeccccCChhHHHHHHHHHhcceEEecCC
Q 035856 207 QVLGHFSIGVFVIHSG----ANSVCESIANGVLMICRPFYGDHRMNARMVEEVWGIGVKVEGI 265 (278)
Q Consensus 207 ~iL~~~~v~~fitHgG----~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l~~~ 265 (278)
++++.++ +||.-.- -++++||+++|+|+|+...-+ - . .+.+. +.|..++.+
T Consensus 302 ~~y~~aD--vfV~pS~~Egfp~vilEAmA~G~PVVat~~gG-~---~-Eiv~~-~~G~lv~~~ 356 (405)
T PRK10125 302 SALNQMD--ALVFSSRVDNYPLILCEALSIGVPVIATHSDA-A---R-EVLQK-SGGKTVSEE 356 (405)
T ss_pred HHHHhCC--EEEECCccccCcCHHHHHHHcCCCEEEeCCCC-h---H-HhEeC-CcEEEECCC
Confidence 3455677 6665332 368999999999999998754 1 1 23334 567777654
No 118
>PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long). This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall
Probab=55.21 E-value=32 Score=30.47 Aligned_cols=78 Identities=19% Similarity=0.214 Sum_probs=57.2
Q ss_pred CCeEEe-cCcc---hhhhcccccccEEEe--eCCchhHHHHHHhCcceeeccccCChhHHHHHHHHHhcceEEecCCCcC
Q 035856 195 GRGKIV-LQAP---QTQVLGHFSIGVFVI--HSGANSVCESIANGVLMICRPFYGDHRMNARMVEEVWGIGVKVEGILLT 268 (278)
Q Consensus 195 ~~~~v~-~w~p---q~~iL~~~~v~~fit--HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~ 268 (278)
++..+. ++.| +..+|+.++++.|.+ .=|+|+++-.|..|+|++.- .+..--+-+.+. |+=+-...+.++
T Consensus 245 ~~~~iL~e~mpf~eYl~lL~~cDl~if~~~RQQgiGnI~lLl~~G~~v~L~----~~np~~~~l~~~-~ipVlf~~d~L~ 319 (360)
T PF07429_consen 245 ENFQILTEFMPFDEYLALLSRCDLGIFNHNRQQGIGNICLLLQLGKKVFLS----RDNPFWQDLKEQ-GIPVLFYGDELD 319 (360)
T ss_pred cceeEhhhhCCHHHHHHHHHhCCEEEEeechhhhHhHHHHHHHcCCeEEEe----cCChHHHHHHhC-CCeEEeccccCC
Confidence 455443 5666 457899999988877 46899999999999999874 344444556665 777766767788
Q ss_pred HHHHHhhhh
Q 035856 269 KSGVLQSLD 277 (278)
Q Consensus 269 ~~~l~~~i~ 277 (278)
...|+++=|
T Consensus 320 ~~~v~ea~r 328 (360)
T PF07429_consen 320 EALVREAQR 328 (360)
T ss_pred HHHHHHHHH
Confidence 888877644
No 119
>KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=55.12 E-value=6.6 Score=37.32 Aligned_cols=42 Identities=21% Similarity=0.334 Sum_probs=27.8
Q ss_pred CCchhHHHHHHhCcceeeccccCC-hhHHHHHHHHHhcceEEec
Q 035856 221 SGANSVCESIANGVLMICRPFYGD-HRMNARMVEEVWGIGVKVE 263 (278)
Q Consensus 221 gG~~s~~eal~~GvP~l~~P~~~D-Q~~na~~~~~~~g~G~~l~ 263 (278)
-|..+.++.|++|||||++|.-.= ...-+..+... |+|--+.
T Consensus 846 nGhTTg~dvLw~GvPmVTmpge~lAsrVa~Sll~~~-Gl~hlia 888 (966)
T KOG4626|consen 846 NGHTTGMDVLWAGVPMVTMPGETLASRVAASLLTAL-GLGHLIA 888 (966)
T ss_pred CCcccchhhhccCCceeecccHHHHHHHHHHHHHHc-ccHHHHh
Confidence 367888999999999999995222 22222344444 7777553
No 120
>PRK14098 glycogen synthase; Provisional
Probab=54.97 E-value=16 Score=34.12 Aligned_cols=79 Identities=9% Similarity=0.111 Sum_probs=45.2
Q ss_pred CCCeEEecCcchh---hhcccccccEEEeeC---Cc-hhHHHHHHhCcceeeccccCChhHHHHHHHHHhcceEEecCCC
Q 035856 194 SGRGKIVLQAPQT---QVLGHFSIGVFVIHS---GA-NSVCESIANGVLMICRPFYGDHRMNARMVEEVWGIGVKVEGIL 266 (278)
Q Consensus 194 ~~~~~v~~w~pq~---~iL~~~~v~~fitHg---G~-~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l~~~~ 266 (278)
+++..+....+.. .+++.++ +|+... |+ .+.+||+++|+|.|+.-..+-.........+. +.|..++..
T Consensus 361 ~~~V~~~g~~~~~~~~~~~a~aD--i~l~PS~~E~~Gl~~lEAma~G~ppVv~~~GGl~d~v~~~~~~~-~~G~l~~~~- 436 (489)
T PRK14098 361 PEQVSVQTEFTDAFFHLAIAGLD--MLLMPGKIESCGMLQMFAMSYGTIPVAYAGGGIVETIEEVSEDK-GSGFIFHDY- 436 (489)
T ss_pred CCCEEEEEecCHHHHHHHHHhCC--EEEeCCCCCCchHHHHHHHhCCCCeEEecCCCCceeeecCCCCC-CceeEeCCC-
Confidence 4566666667664 5778888 666432 22 47889999999888766433111100011123 567766543
Q ss_pred cCHHHHHhhhh
Q 035856 267 LTKSGVLQSLD 277 (278)
Q Consensus 267 ~~~~~l~~~i~ 277 (278)
+.+.+.++|+
T Consensus 437 -d~~~la~ai~ 446 (489)
T PRK14098 437 -TPEALVAKLG 446 (489)
T ss_pred -CHHHHHHHHH
Confidence 4566665553
No 121
>PF05159 Capsule_synth: Capsule polysaccharide biosynthesis protein; InterPro: IPR007833 This family includes export proteins involved in capsule polysaccharide biosynthesis, such as KpsS P42218 from SWISSPROT and LipB P57038 from SWISSPROT. Capsule polysaccharide modification protein lipB/A is involved in the phospholipid modification of the capsular polysaccharide and is a strong requirement for its translocation to the cell surface. The capsule of Neisseria meningitidis serogroup B and of other meningococcal serogroups and other Gram-negative bacterial pathogens, are anchored in the outer membrane through a 1,2-diacylglycerol moiety. The lipA and lipB genes are located on the 3' end of the ctr operon. lipA and lipB do not encode proteins responsible for diacylglycerophosphatidic acid substitution of the meningococcal capsule polymer, but they are required for proper translocation and surface expression of the lipidated polymer []. KpsS is an unusual sulphate-modified form of the capsular polysaccharide in Rhizobium loti (Mesorhizobium loti). Many plants, including R. loti, enter into symbiotic relationships with bacteria that allow survival in nutrient-limiting environments. KpsS functions as a fucosyl sulphotransferase in vitro. The kpsS gene product shares no significant amino acid similarity with previously identified sulphotransferases []. Sulphated cell surface polysaccharides are required for optimum nodule formation but limit growth rate and nodule colonisation in M. loti [].; GO: 0000271 polysaccharide biosynthetic process, 0015774 polysaccharide transport
Probab=54.43 E-value=22 Score=30.00 Aligned_cols=40 Identities=15% Similarity=0.043 Sum_probs=30.9
Q ss_pred EEecCcchhhhcccccccEEEeeCCchhHHHHHHhCcceeecc
Q 035856 198 KIVLQAPQTQVLGHFSIGVFVIHSGANSVCESIANGVLMICRP 240 (278)
Q Consensus 198 ~v~~w~pq~~iL~~~~v~~fitHgG~~s~~eal~~GvP~l~~P 240 (278)
.+.+-++-.++|.+++ +++|-.+ ..-+||+.+|+|+++..
T Consensus 186 ~~~~~~~~~~Ll~~s~--~VvtinS-tvGlEAll~gkpVi~~G 225 (269)
T PF05159_consen 186 IIDDDVNLYELLEQSD--AVVTINS-TVGLEALLHGKPVIVFG 225 (269)
T ss_pred EECCCCCHHHHHHhCC--EEEEECC-HHHHHHHHcCCceEEec
Confidence 3446677788999999 8888544 34469999999999864
No 122
>PF07881 Fucose_iso_N1: L-fucose isomerase, first N-terminal domain; InterPro: IPR012888 Proteins containing this domain are similar to L-fucose isomerase expressed by Escherichia coli (P11552 from SWISSPROT, 5.3.1.3 from EC). This enzyme corresponds to glucose-6-phosphate isomerase in glycolysis, and converts an aldo-hexose to a ketose to prepare it for aldol cleavage. The enzyme is a hexamer, with each subunit being wedge-shaped and composed of three domains. Both domains 1 and 2 contain central parallel beta-sheets with surrounding alpha helices. Domain 1 demonstrates the beta-alpha-beta-alpha- beta Rossman fold. The active centre is shared between pairs of subunits related along the molecular three-fold axis, with domains 2 and 3 from one subunit providing most of the substrate-contacting residues, and domain 1 from the adjacent subunit contributing some other residues []. ; GO: 0008736 L-fucose isomerase activity, 0006004 fucose metabolic process, 0005737 cytoplasm; PDB: 3A9R_A 3A9T_C 3A9S_C 1FUI_E.
Probab=53.78 E-value=48 Score=25.98 Aligned_cols=64 Identities=16% Similarity=0.186 Sum_probs=26.9
Q ss_pred CceEEecCCCCCCCCCCCCCCcHHHHHHHHHHchHHHHHHHHHHHHc-CCCCccEEEeCCCchhH---HHHHHHc
Q 035856 6 NIRVYDVEDGVPMKYASTESNPLEAVELFVKATPENFKKGLDAAVSK-TGRKISCFLTDAFLTFS---GEMARDM 76 (278)
Q Consensus 6 ~i~~~~i~~glp~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~-~~~~~d~vI~D~~~~~~---~~vA~~l 76 (278)
.|-..++.||..-++ .+.++.....+.+.+..+|++-++- .+.++.|||.|...... ...|++|
T Consensus 5 kIGIrp~iDGR~~gV-------resLe~~tm~ma~~~a~ll~~~l~~~~G~~Ve~Viad~~Iggv~eAa~~ae~f 72 (171)
T PF07881_consen 5 KIGIRPTIDGRRGGV-------RESLEEQTMNMAKAVAELLEENLRYPDGSPVECVIADTTIGGVAEAAACAEKF 72 (171)
T ss_dssp EEEEEEB----TTTH-------HHHHHHHHHHHHHHHHHHHHHH-B-TTS-B--EEE-SS-B-SHHHHHHHHHHH
T ss_pred eEEEEEeecCCchhH-------HHHHHHHHHHHHHHHHHHHHHhcccCCCCeeEEEECCCcccCHHHHHHHHHHH
Confidence 566777778876542 2233344333334444444443322 25689999999865433 3445555
No 123
>cd07038 TPP_PYR_PDC_IPDC_like Pyrimidine (PYR) binding domain of pyruvate decarboxylase (PDC), indolepyruvate decarboxylase (IPDC) and related proteins. Thiamine pyrophosphate (TPP family), pyrimidine (PYR) binding domain of pyruvate decarboxylase (PDC) and indolepyruvate decarboxylase (IPDC) subfamily. The PYR domain is found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. TPP binds in the cleft formed by a PYR domain and a PP domain. The PYR domain, binds the aminopyrimidine ring of TPP, the PP domain binds the diphosphate residue. The PYR and PP domains have a common fold, but do not share strong sequence conservation. The PP domain is not included in this sub-family. Most TPP-dependent enzymes have the PYR and PP domains on the same subunit although these domains can be alternatively arranged in the primary structure. TPP-dependent enzymes are multisubunit proteins, the smallest catalytic unit being a dimer-of-active sites, for many
Probab=52.98 E-value=23 Score=27.48 Aligned_cols=27 Identities=22% Similarity=0.336 Sum_probs=21.4
Q ss_pred ccEEEeeCC------chhHHHHHHhCcceeecc
Q 035856 214 IGVFVIHSG------ANSVCESIANGVLMICRP 240 (278)
Q Consensus 214 v~~fitHgG------~~s~~eal~~GvP~l~~P 240 (278)
.+++++|.| .+++.||...++|+|++.
T Consensus 60 ~gv~~~t~GpG~~n~~~gl~~A~~~~~Pvl~i~ 92 (162)
T cd07038 60 LGALVTTYGVGELSALNGIAGAYAEHVPVVHIV 92 (162)
T ss_pred CEEEEEcCCccHHHHHHHHHHHHHcCCCEEEEe
Confidence 457777766 357789999999999995
No 124
>PRK02797 4-alpha-L-fucosyltransferase; Provisional
Probab=51.70 E-value=41 Score=29.31 Aligned_cols=76 Identities=21% Similarity=0.304 Sum_probs=54.2
Q ss_pred CCeEEe-cCcc---hhhhcccccccEEEee--CCchhHHHHHHhCcceeeccccCChhHHHHHHHHHhcceEEecCCCcC
Q 035856 195 GRGKIV-LQAP---QTQVLGHFSIGVFVIH--SGANSVCESIANGVLMICRPFYGDHRMNARMVEEVWGIGVKVEGILLT 268 (278)
Q Consensus 195 ~~~~v~-~w~p---q~~iL~~~~v~~fitH--gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~ 268 (278)
++..+. +..| +..+|++++++-|+++ =|.|+++-.+..|+|+++- -+-+.+.. +.+. |+=+-.+.+.++
T Consensus 206 ~~~~~L~e~l~f~eYl~lL~~~Dl~~f~~~RQQgiGnl~lLi~~G~~v~l~---r~n~fwqd-l~e~-gv~Vlf~~d~L~ 280 (322)
T PRK02797 206 ENFQILTEKLPFDDYLALLRQCDLGYFIFARQQGIGTLCLLIQLGKPVVLS---RDNPFWQD-LTEQ-GLPVLFTGDDLD 280 (322)
T ss_pred ccEEehhhhCCHHHHHHHHHhCCEEEEeechhhHHhHHHHHHHCCCcEEEe---cCCchHHH-HHhC-CCeEEecCCccc
Confidence 566554 5555 5679999999988884 5899999999999999985 33344444 4444 666655666777
Q ss_pred HHHHHhh
Q 035856 269 KSGVLQS 275 (278)
Q Consensus 269 ~~~l~~~ 275 (278)
...++++
T Consensus 281 ~~~v~e~ 287 (322)
T PRK02797 281 EDIVREA 287 (322)
T ss_pred HHHHHHH
Confidence 7777655
No 125
>PLN00142 sucrose synthase
Probab=51.37 E-value=1.2e+02 Score=30.40 Aligned_cols=54 Identities=15% Similarity=0.181 Sum_probs=35.6
Q ss_pred EEEee---CCc-hhHHHHHHhCcceeeccccCChhHHHHHHHHHhcceEEecCCCcCHHHHHhhh
Q 035856 216 VFVIH---SGA-NSVCESIANGVLMICRPFYGDHRMNARMVEEVWGIGVKVEGILLTKSGVLQSL 276 (278)
Q Consensus 216 ~fitH---gG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~~~~l~~~i 276 (278)
+|+.- =|+ .+++||+++|+|+|+....+ ....+++. ..|.-++.+ +.+++.++|
T Consensus 669 VfVlPS~~EgFGLvvLEAMA~GlPVVATdvGG----~~EIV~dG-~tG~LV~P~--D~eaLA~aI 726 (815)
T PLN00142 669 AFVQPALYEAFGLTVVEAMTCGLPTFATCQGG----PAEIIVDG-VSGFHIDPY--HGDEAANKI 726 (815)
T ss_pred EEEeCCcccCCCHHHHHHHHcCCCEEEcCCCC----HHHHhcCC-CcEEEeCCC--CHHHHHHHH
Confidence 66642 344 48999999999999976533 34455554 578888764 455555554
No 126
>TIGR02470 sucr_synth sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.
Probab=50.68 E-value=1.4e+02 Score=29.89 Aligned_cols=46 Identities=13% Similarity=0.249 Sum_probs=32.4
Q ss_pred hhHHHHHHhCcceeeccccCChhHHHHHHHHHhcceEEecCCCcCHHHHHhhh
Q 035856 224 NSVCESIANGVLMICRPFYGDHRMNARMVEEVWGIGVKVEGILLTKSGVLQSL 276 (278)
Q Consensus 224 ~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~~~~l~~~i 276 (278)
.+++||+++|+|+|+.-..| ....+.+. ..|..++.. +.++++++|
T Consensus 658 LvvLEAMAcGlPVVAT~~GG----~~EiV~dg-~tGfLVdp~--D~eaLA~aL 703 (784)
T TIGR02470 658 LTVLEAMTCGLPTFATRFGG----PLEIIQDG-VSGFHIDPY--HGEEAAEKI 703 (784)
T ss_pred HHHHHHHHcCCCEEEcCCCC----HHHHhcCC-CcEEEeCCC--CHHHHHHHH
Confidence 58899999999999975533 44455555 678888764 456666554
No 127
>COG0052 RpsB Ribosomal protein S2 [Translation, ribosomal structure and biogenesis]
Probab=50.57 E-value=26 Score=29.29 Aligned_cols=36 Identities=11% Similarity=0.006 Sum_probs=27.5
Q ss_pred CCccEE-EeCCCc-hhHHHHHHHcCCCeEeEeCChhhh
Q 035856 55 RKISCF-LTDAFL-TFSGEMARDMHIPWFPVFVAMPYN 90 (278)
Q Consensus 55 ~~~d~v-I~D~~~-~~~~~vA~~lgIP~v~~~~~~~~~ 90 (278)
.-||++ |.|+-. --+..-|+++|||.|.++-+.+.+
T Consensus 155 ~~Pd~l~ViDp~~e~iAv~EA~klgIPVvAlvDTn~dp 192 (252)
T COG0052 155 GLPDVLFVIDPRKEKIAVKEANKLGIPVVALVDTNCDP 192 (252)
T ss_pred CCCCEEEEeCCcHhHHHHHHHHHcCCCEEEEecCCCCC
Confidence 349977 677754 457788999999999998766554
No 128
>PRK14089 ipid-A-disaccharide synthase; Provisional
Probab=50.13 E-value=43 Score=29.76 Aligned_cols=48 Identities=13% Similarity=0.110 Sum_probs=29.8
Q ss_pred HHHHHHHHHHcCCCCccEEEe-CC--CchhHHHHHHHc--CCCeEeEeCChhhh
Q 035856 42 FKKGLDAAVSKTGRKISCFLT-DA--FLTFSGEMARDM--HIPWFPVFVAMPYN 90 (278)
Q Consensus 42 l~~~l~~l~~~~~~~~d~vI~-D~--~~~~~~~vA~~l--gIP~v~~~~~~~~~ 90 (278)
+...++++.+.. .+||++|. |. |...-...+++. |||.+.|.+...+.
T Consensus 63 ~~~~~~~~~~~~-~~pd~~i~iD~p~Fnl~lak~~k~~~~~i~viyyi~PqvWA 115 (347)
T PRK14089 63 AKKAIKEMVELA-KQADKVLLMDSSSFNIPLAKKIKKAYPKKEIIYYILPQVWA 115 (347)
T ss_pred HHHHHHHHHHHh-cCCCEEEEeCCCCCCHHHHHHHHhcCCCCCEEEEECcccee
Confidence 444455544443 58998865 65 233344556677 79999887766543
No 129
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=49.48 E-value=28 Score=27.41 Aligned_cols=42 Identities=12% Similarity=0.235 Sum_probs=29.7
Q ss_pred hHHHHHHHHHHHHcCCCCccEEEeCCCchhHHHHHHHcCCCeEeEeCC
Q 035856 39 PENFKKGLDAAVSKTGRKISCFLTDAFLTFSGEMARDMHIPWFPVFVA 86 (278)
Q Consensus 39 ~~~l~~~l~~l~~~~~~~~d~vI~D~~~~~~~~vA~~lgIP~v~~~~~ 86 (278)
.+.++..+.++.++ .+|+||-+.. ...+|+++|+|++.+.+.
T Consensus 111 ~~e~~~~i~~~~~~---G~~viVGg~~---~~~~A~~~gl~~v~i~sg 152 (176)
T PF06506_consen 111 EEEIEAAIKQAKAE---GVDVIVGGGV---VCRLARKLGLPGVLIESG 152 (176)
T ss_dssp HHHHHHHHHHHHHT---T--EEEESHH---HHHHHHHTTSEEEESS--
T ss_pred HHHHHHHHHHHHHc---CCcEEECCHH---HHHHHHHcCCcEEEEEec
Confidence 45577777776554 8999999963 479999999999987653
No 130
>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]
Probab=48.51 E-value=22 Score=30.52 Aligned_cols=38 Identities=13% Similarity=0.201 Sum_probs=31.3
Q ss_pred CCchhHH--HHHHhCcceeeccccCChhHHHHH-HHHHhcce
Q 035856 221 SGANSVC--ESIANGVLMICRPFYGDHRMNARM-VEEVWGIG 259 (278)
Q Consensus 221 gG~~s~~--eal~~GvP~l~~P~~~DQ~~na~~-~~~~~g~G 259 (278)
||||+++ -|-.+||-++.+-+...|..+++. +... |+-
T Consensus 81 CGWG~l~~~aA~~y~v~V~GvTlS~~Q~~~~~~r~~~~-gl~ 121 (283)
T COG2230 81 CGWGGLAIYAAEEYGVTVVGVTLSEEQLAYAEKRIAAR-GLE 121 (283)
T ss_pred CChhHHHHHHHHHcCCEEEEeeCCHHHHHHHHHHHHHc-CCC
Confidence 8999876 455569999999999999999987 5554 877
No 131
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=47.25 E-value=28 Score=30.69 Aligned_cols=63 Identities=19% Similarity=0.219 Sum_probs=39.2
Q ss_pred CCCeEEecCc--chh---hhcccccccEEEeeC---C-chhHHHHHHhCcceeeccccCChhHHHHHHHHHhcceEEec
Q 035856 194 SGRGKIVLQA--PQT---QVLGHFSIGVFVIHS---G-ANSVCESIANGVLMICRPFYGDHRMNARMVEEVWGIGVKVE 263 (278)
Q Consensus 194 ~~~~~v~~w~--pq~---~iL~~~~v~~fitHg---G-~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l~ 263 (278)
.++..+.++. ++. .+++.++ +|+... | -.+++||+++|+|+|+....+ ....+.+. ..|..++
T Consensus 251 ~~~v~~~~~~~~~~~~~~~~~~~ad--~~v~~s~~Eg~g~~~lEA~a~G~Pvv~s~~~~----~~~~i~~~-~~g~~~~ 322 (372)
T cd03792 251 DPDIHVLTLPPVSDLEVNALQRAST--VVLQKSIREGFGLTVTEALWKGKPVIAGPVGG----IPLQIEDG-ETGFLVD 322 (372)
T ss_pred CCCeEEEecCCCCHHHHHHHHHhCe--EEEeCCCccCCCHHHHHHHHcCCCEEEcCCCC----chhhcccC-CceEEeC
Confidence 3455566665 333 4677788 676533 2 358999999999999976432 22334443 5566554
No 132
>TIGR03123 one_C_unchar_1 probable H4MPT-linked C1 transfer pathway protein. This protein family was identified, by the method of partial phylogenetic profiling, as related to the use of tetrahydromethanopterin (H4MPT) as a C-1 carrier. Characteristic markers of the H4MPT-linked C1 transfer pathway include formylmethanofuran dehydrogenase subunits, methenyltetrahydromethanopterin cyclohydrolase, etc. Tetrahydromethanopterin, a tetrahydrofolate analog, occurs in methanogenic archaea, bacterial methanotrophs, planctomycetes, and a few other lineages.
Probab=46.84 E-value=68 Score=28.12 Aligned_cols=55 Identities=15% Similarity=0.152 Sum_probs=35.7
Q ss_pred HHHHHHHHHchHHHHHHHHHHHHcCCCCccEEEeCCCchhHHHHHHHcCCCeEeEe
Q 035856 29 EAVELFVKATPENFKKGLDAAVSKTGRKISCFLTDAFLTFSGEMARDMHIPWFPVF 84 (278)
Q Consensus 29 ~~~~~~~~~~~~~l~~~l~~l~~~~~~~~d~vI~D~~~~~~~~vA~~lgIP~v~~~ 84 (278)
+....+.+.....+.+.++++..+.+..+ +++.-.--..+..+|+++|+|++.+.
T Consensus 252 ~~A~~i~~~~~~~m~~ai~~v~~~~G~Dp-v~~gGaG~~~a~~lA~~lg~~~v~~~ 306 (318)
T TIGR03123 252 NLAKYYYEAQLEQLTEAIEEVLERYGLKT-VVAAGAGEFLAKEAAARLGRECIDVD 306 (318)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCC-eEEecchHHHHHHHHHHcCCCeecHH
Confidence 34455555566667777777776654344 33333333567799999999998764
No 133
>PF00862 Sucrose_synth: Sucrose synthase; InterPro: IPR000368 Sucrose synthases catalyse the synthesis of sucrose 2.4.1.13 from EC in the following reaction: UDP-glucose + D-fructose = UDP + sucrose This family includes the bulk of the sucrose synthase protein. However the carboxyl terminal region of the sucrose synthases belongs to the glycosyl transferase family IPR001296 from INTERPRO. This enzyme is found mainly in plants but also appears in bacteria.; GO: 0005985 sucrose metabolic process; PDB: 2R60_A 2R66_A 2R68_A 3S27_G 3S29_A 3S28_A.
Probab=46.14 E-value=26 Score=32.60 Aligned_cols=85 Identities=11% Similarity=0.051 Sum_probs=42.6
Q ss_pred HHHHcCCCCccEEEeCCC--chhHHHHHHHcCCCeEeEeCChhhhhhhhhcchhhhhhhccCCcchHHHHHHHHH---hc
Q 035856 48 AAVSKTGRKISCFLTDAF--LTFSGEMARDMHIPWFPVFVAMPYNGSAHIHTDLIHQFFINNCEESLFSSMLSKL---GG 122 (278)
Q Consensus 48 ~l~~~~~~~~d~vI~D~~--~~~~~~vA~~lgIP~v~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~---~~ 122 (278)
++.++.+.+||+||-... ...|..+|+++|||......+- .-.-+......++. .... +.+..+. .-
T Consensus 393 ~i~~e~~~~PdlI~GnYsDgnlvA~LLs~~lgv~~~~iaHsL--ek~Ky~~s~~~w~e-----~e~~-Yhfs~qftAd~i 464 (550)
T PF00862_consen 393 EILAELQGKPDLIIGNYSDGNLVASLLSRKLGVTQCFIAHSL--EKTKYEDSDLYWKE-----IEEK-YHFSCQFTADLI 464 (550)
T ss_dssp HHHHHHTS--SEEEEEHHHHHHHHHHHHHHHT-EEEEE-SS---HHHHHHTTTTTSHH-----HHHH-H-HHHHHHHHHH
T ss_pred HHHHHhCCCCcEEEeccCcchHHHHHHHhhcCCceehhhhcc--ccccccccCCCHHH-----HHhh-ccchhhhhHHHH
Confidence 333333458999987642 3467789999999988653221 11111111111111 0111 1111111 12
Q ss_pred ccCCCcEEEecchHhhhc
Q 035856 123 VLPQASAAVMNFYQELYC 140 (278)
Q Consensus 123 ~~~~~~~~l~nt~~~le~ 140 (278)
.+..++.+++.|.+|++.
T Consensus 465 amn~adfIItST~QEI~g 482 (550)
T PF00862_consen 465 AMNAADFIITSTYQEIAG 482 (550)
T ss_dssp HHHHSSEEEESSHHHHHB
T ss_pred HhhcCCEEEEcchHhhcC
Confidence 466899999999999983
No 134
>cd07037 TPP_PYR_MenD Pyrimidine (PYR) binding domain of 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexadiene-1-carboxylate synthase (MenD) and related proteins. Thiamine pyrophosphate (TPP family), pyrimidine (PYR) binding domain of 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexadiene-1-carboxylate (SEPHCHC) synthase (MenD) subfamily. The PYR domain is found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. TPP binds in the cleft formed by a PYR domain and a PP domain. The PYR domain, binds the aminopyrimidine ring of TPP, the PP domain binds the diphosphate residue. The PYR and PP domains have a common fold, but do not share strong sequence conservation. The PP domain is not included in this sub-family. Most TPP-dependent enzymes have the PYR and PP domains on the same subunit although these domains can be alternatively arranged in the primary structure. TPP-dependent enzymes are multisubunit proteins, the smallest catalytic unit being a dim
Probab=44.50 E-value=25 Score=27.45 Aligned_cols=28 Identities=25% Similarity=0.254 Sum_probs=22.3
Q ss_pred cccEEEeeCC------chhHHHHHHhCcceeecc
Q 035856 213 SIGVFVIHSG------ANSVCESIANGVLMICRP 240 (278)
Q Consensus 213 ~v~~fitHgG------~~s~~eal~~GvP~l~~P 240 (278)
+.++.++|+| .+++.||...++|||++.
T Consensus 60 ~~gv~~~t~GpG~~n~~~gl~~A~~~~~Pvl~i~ 93 (162)
T cd07037 60 RPVAVVCTSGTAVANLLPAVVEAYYSGVPLLVLT 93 (162)
T ss_pred CCEEEEECCchHHHHHhHHHHHHHhcCCCEEEEE
Confidence 3447778877 457789999999999994
No 135
>COG4370 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=43.99 E-value=19 Score=31.24 Aligned_cols=67 Identities=13% Similarity=0.111 Sum_probs=41.9
Q ss_pred CCCeEEe-cCcchhhhcccccccEEEeeCCchhHHHHHHhCcceeeccccCChhHH--HHHHHHHhcceEEec
Q 035856 194 SGRGKIV-LQAPQTQVLGHFSIGVFVIHSGANSVCESIANGVLMICRPFYGDHRMN--ARMVEEVWGIGVKVE 263 (278)
Q Consensus 194 ~~~~~v~-~w~pq~~iL~~~~v~~fitHgG~~s~~eal~~GvP~l~~P~~~DQ~~n--a~~~~~~~g~G~~l~ 263 (278)
++|..++ .|-...++|-+++ +.|--.| .-+-.++-.|+|+|.+|-.+-|+.- |.+=.+++|..+.+-
T Consensus 293 kdnc~l~lsqqsfadiLH~ad--aalgmAG-TAtEQavGLGkPvi~fPg~GPQy~pgFA~rQ~rLLG~sltlv 362 (412)
T COG4370 293 KDNCSLWLSQQSFADILHAAD--AALGMAG-TATEQAVGLGKPVIGFPGQGPQYNPGFAERQQRLLGASLTLV 362 (412)
T ss_pred cCceEEEEeHHHHHHHHHHHH--HHHHhcc-chHHHhhccCCceeecCCCCCCcChHHHHHHHHHhcceeeec
Confidence 3455444 6666666776666 3332222 1122456679999999999999754 555566667777763
No 136
>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins. The function of this family is unknown.
Probab=43.26 E-value=48 Score=28.90 Aligned_cols=59 Identities=19% Similarity=0.195 Sum_probs=39.2
Q ss_pred cchhhhcccccccEEEeeCCchhHHHHHHhCcceeeccccCChhHHHHHHHHHh--cceEEe
Q 035856 203 APQTQVLGHFSIGVFVIHSGANSVCESIANGVLMICRPFYGDHRMNARMVEEVW--GIGVKV 262 (278)
Q Consensus 203 ~pq~~iL~~~~v~~fitHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~--g~G~~l 262 (278)
=|+...|+.++ ..+||---.+-+.||+..|+|+.++|.-+-.....+.+..+. |.-..+
T Consensus 220 nPy~~~La~ad-~i~VT~DSvSMvsEA~~tG~pV~v~~l~~~~~r~~r~~~~L~~~g~~r~~ 280 (311)
T PF06258_consen 220 NPYLGFLAAAD-AIVVTEDSVSMVSEAAATGKPVYVLPLPGRSGRFRRFHQSLEERGAVRPF 280 (311)
T ss_pred CcHHHHHHhCC-EEEEcCccHHHHHHHHHcCCCEEEecCCCcchHHHHHHHHHHHCCCEEEC
Confidence 46778889888 255666667888999999999999998762223333333322 554444
No 137
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=43.25 E-value=1.3e+02 Score=30.96 Aligned_cols=76 Identities=18% Similarity=0.203 Sum_probs=45.3
Q ss_pred CCeEEecCcchhhh---cccc--cccEEEee---CCc-hhHHHHHHhCcceeeccccCChhHHHHHHHHHhcceEEecCC
Q 035856 195 GRGKIVLQAPQTQV---LGHF--SIGVFVIH---SGA-NSVCESIANGVLMICRPFYGDHRMNARMVEEVWGIGVKVEGI 265 (278)
Q Consensus 195 ~~~~v~~w~pq~~i---L~~~--~v~~fitH---gG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l~~~ 265 (278)
+++.+.+++++.++ +..+ +..+||.- =|+ .+++||+++|+|+|+....+ ....+... ..|+.++.+
T Consensus 548 g~V~FlG~v~~edvp~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAMAcGlPVVASdvGG----~~EII~~g-~nGlLVdP~ 622 (1050)
T TIGR02468 548 GQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPMVATKNGG----PVDIHRVL-DNGLLVDPH 622 (1050)
T ss_pred CeEEecCCCCHHHHHHHHHHhhhcCCeeeCCcccCCCCHHHHHHHHhCCCEEEeCCCC----cHHHhccC-CcEEEECCC
Confidence 34444467676543 3333 12366653 233 58899999999999987543 22233343 568777654
Q ss_pred CcCHHHHHhhhh
Q 035856 266 LLTKSGVLQSLD 277 (278)
Q Consensus 266 ~~~~~~l~~~i~ 277 (278)
+.+.|+++|.
T Consensus 623 --D~eaLA~AL~ 632 (1050)
T TIGR02468 623 --DQQAIADALL 632 (1050)
T ss_pred --CHHHHHHHHH
Confidence 5666766654
No 138
>PLN00142 sucrose synthase
Probab=42.82 E-value=37 Score=33.79 Aligned_cols=38 Identities=5% Similarity=-0.004 Sum_probs=27.4
Q ss_pred HHHHcCCCCccEEEeCCCc--hhHHHHHHHcCCCeEeEeC
Q 035856 48 AAVSKTGRKISCFLTDAFL--TFSGEMARDMHIPWFPVFV 85 (278)
Q Consensus 48 ~l~~~~~~~~d~vI~D~~~--~~~~~vA~~lgIP~v~~~~ 85 (278)
.+.++.+.+||+|++..-. ..|..+|+++|||.+....
T Consensus 400 ~~~~~~~~~PDlIHaHYwdsg~vA~~La~~lgVP~v~T~H 439 (815)
T PLN00142 400 EILAELQGKPDLIIGNYSDGNLVASLLAHKLGVTQCTIAH 439 (815)
T ss_pred HHHHhcCCCCCEEEECCccHHHHHHHHHHHhCCCEEEEcc
Confidence 3333334579999998643 3467999999999997654
No 139
>PHA02542 41 41 helicase; Provisional
Probab=42.59 E-value=52 Score=30.58 Aligned_cols=45 Identities=13% Similarity=0.109 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHcCCCCccEEEeCCCchhH----------------------HHHHHHcCCCeEeEeC
Q 035856 41 NFKKGLDAAVSKTGRKISCFLTDAFLTFS----------------------GEMARDMHIPWFPVFV 85 (278)
Q Consensus 41 ~l~~~l~~l~~~~~~~~d~vI~D~~~~~~----------------------~~vA~~lgIP~v~~~~ 85 (278)
.++..++++.++.+.++|+||.|.+..-. ..+|++++||++..+-
T Consensus 286 ~ir~~~rrlk~~~g~~~dlVvIDYLqL~~~~~~~~~~~nr~~ei~~Isr~LK~lAkel~vpVi~lsQ 352 (473)
T PHA02542 286 HFRALLNELKLKKNFKPDVIIVDYLGICASSRLRVSSENSYTYVKAIAEELRGLAVEHDVVVWTAAQ 352 (473)
T ss_pred HHHHHHHHHHHhcCCCCCEEEEechhhccCCcccCCCCChHHHHHHHHHHHHHHHHHhCCeEEEEEe
Confidence 45555666554433359999999864321 2678899999998764
No 140
>cd07039 TPP_PYR_POX Pyrimidine (PYR) binding domain of POX. Thiamine pyrophosphate (TPP family), pyrimidine (PYR) binding domain of pyruvate oxidase (POX) subfamily. The PYR domain is found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. TPP binds in the cleft formed by a PYR domain and a PP domain. The PYR domain, binds the aminopyrimidine ring of TPP, the PP domain binds the diphosphate residue. The PYR and PP domains have a common fold, but do not share strong sequence conservation. The PP domain is not included in this sub-family. Most TPP-dependent enzymes have the PYR and PP domains on the same subunit although these domains can be alternatively arranged in the primary structure. TPP-dependent enzymes are multisubunit proteins, the smallest catalytic unit being a dimer-of-active sites. Lactobacillus plantarum POX is a homotetramer (dimer-of-homodimers), having two active sites per homodimer lying between PYR and PP domains of differ
Probab=42.33 E-value=29 Score=27.05 Aligned_cols=28 Identities=18% Similarity=0.302 Sum_probs=22.8
Q ss_pred cccEEEeeCC------chhHHHHHHhCcceeecc
Q 035856 213 SIGVFVIHSG------ANSVCESIANGVLMICRP 240 (278)
Q Consensus 213 ~v~~fitHgG------~~s~~eal~~GvP~l~~P 240 (278)
++++.++|+| .+++.+|...++|||++.
T Consensus 63 ~~~v~~~t~GpG~~n~~~~l~~A~~~~~Pvl~I~ 96 (164)
T cd07039 63 KLGVCLGSSGPGAIHLLNGLYDAKRDRAPVLAIA 96 (164)
T ss_pred CCEEEEECCCCcHHHHHHHHHHHHhcCCCEEEEe
Confidence 3558888887 457889999999999995
No 141
>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=42.25 E-value=72 Score=26.55 Aligned_cols=45 Identities=24% Similarity=0.351 Sum_probs=29.8
Q ss_pred CCeEEecCcc---hhhhcccccccEEEee---CCchh-HHHHHHhCcceeeccc
Q 035856 195 GRGKIVLQAP---QTQVLGHFSIGVFVIH---SGANS-VCESIANGVLMICRPF 241 (278)
Q Consensus 195 ~~~~v~~w~p---q~~iL~~~~v~~fitH---gG~~s-~~eal~~GvP~l~~P~ 241 (278)
++....+|++ ...++..++ +++.. .|++. +.||+++|+|+|....
T Consensus 257 ~~v~~~g~~~~~~~~~~~~~~~--~~v~ps~~e~~~~~~~Ea~a~g~pvi~~~~ 308 (381)
T COG0438 257 DNVKFLGYVPDEELAELLASAD--VFVLPSLSEGFGLVLLEAMAAGTPVIASDV 308 (381)
T ss_pred CcEEEecccCHHHHHHHHHhCC--EEEeccccccchHHHHHHHhcCCcEEECCC
Confidence 4555568888 234566676 44444 35544 5999999999987654
No 142
>cd01141 TroA_d Periplasmic binding protein TroA_d. These proteins are predicted to function as initial receptors in the ABC metal ion uptake in eubacteria and archaea. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind their ligands in the cleft between these domains.
Probab=41.97 E-value=43 Score=26.27 Aligned_cols=38 Identities=13% Similarity=0.015 Sum_probs=25.4
Q ss_pred HHHHHHHHcCCCCccEEEeCCCchh--HHHHHHHcCCCeEeEe
Q 035856 44 KGLDAAVSKTGRKISCFLTDAFLTF--SGEMARDMHIPWFPVF 84 (278)
Q Consensus 44 ~~l~~l~~~~~~~~d~vI~D~~~~~--~~~vA~~lgIP~v~~~ 84 (278)
.-++++++. +||+||......- ....-+++|||.+.+.
T Consensus 60 ~n~E~ll~l---~PDlii~~~~~~~~~~~~~l~~~gIpvv~i~ 99 (186)
T cd01141 60 LNVELIVAL---KPDLVILYGGFQAQTILDKLEQLGIPVLYVN 99 (186)
T ss_pred CCHHHHhcc---CCCEEEEecCCCchhHHHHHHHcCCCEEEeC
Confidence 456776654 9999998653322 3344468999998875
No 143
>CHL00076 chlB photochlorophyllide reductase subunit B
Probab=41.85 E-value=39 Score=31.74 Aligned_cols=33 Identities=9% Similarity=0.231 Sum_probs=25.8
Q ss_pred HHHHHcCCCCccEEEeCCCchhHHHHHHHcCCCeEeEe
Q 035856 47 DAAVSKTGRKISCFLTDAFLTFSGEMARDMHIPWFPVF 84 (278)
Q Consensus 47 ~~l~~~~~~~~d~vI~D~~~~~~~~vA~~lgIP~v~~~ 84 (278)
++++++. +||+||-+. +...+|+++|||++..+
T Consensus 367 ~~~I~~~--~pdliiGs~---~er~ia~~lgiP~~~is 399 (513)
T CHL00076 367 GDMIARV--EPSAIFGTQ---MERHIGKRLDIPCGVIS 399 (513)
T ss_pred HHHHHhc--CCCEEEECc---hhhHHHHHhCCCEEEee
Confidence 4444443 899999986 67788999999998765
No 144
>cd06559 Endonuclease_V Endonuclease_V, a DNA repair enzyme that initiates repair of nitrosative deaminated purine bases. Endonuclease_V (EndoV) is an enzyme that can initiate repair of all possible deaminated DNA bases. EndoV cleaves the DNA strand containing lesions at the second phosphodiester bond 3' to the lesion using Mg2+ as a cofactor. EndoV homologs are conserved throughout all domains of life from bacteria to humans. EndoV is encoded by the nfi gene and nfi null mutant mice have a phenotype prone to cancer. The ability of endonuclease V to recognize mismatches and abnormal replicative DNA structures suggests that the enzyme plays an important role in DNA metabolism. The details of downstream processing for the EndoV pathway remain unknown.
Probab=41.72 E-value=29 Score=28.33 Aligned_cols=38 Identities=21% Similarity=0.182 Sum_probs=23.0
Q ss_pred HHHHHHcCCCCccEEEeCCCchh-------HHHHHHHcCCCeEeE
Q 035856 46 LDAAVSKTGRKISCFLTDAFLTF-------SGEMARDMHIPWFPV 83 (278)
Q Consensus 46 l~~l~~~~~~~~d~vI~D~~~~~-------~~~vA~~lgIP~v~~ 83 (278)
+.+++++....||+|++|-.-.. +..+.-.+++|++-.
T Consensus 83 l~~~~~~l~~~PDlilVDG~G~~HpR~~GlA~HlGv~l~~PtIGV 127 (208)
T cd06559 83 LLEALEKLKTKPDLLLVDGHGIAHPRRFGLASHLGVLLDLPTIGV 127 (208)
T ss_pred HHHHHHhCCCCCCEEEEeCCccccCCCcchhheeeeecCCCEEEE
Confidence 44444444458999999986543 233344455677765
No 145
>cd01981 Pchlide_reductase_B Pchlide_reductase_B: B protein of the NB protein complex of Protochlorophyllide (Pchlide)_reductase. Pchlide reductase catalyzes the reductive formation of chlorophyllide (chlide) from protochlorophyllide (pchlide) during biosynthesis of chlorophylls and bacteriochlorophylls. This group contains both the light-independent Pchlide reductase (DPOR) and light-dependent Pchlide reductase (LPOR). Angiosperms contain only LPOR, cyanobacteria, algae and gymnosperms contain both DPOR and LPOR, primitive anoxygenic photosynthetic bacteria contain only DPOR. NB is structurally similar to the FeMo protein of nitrogenase, forming an N2B2 heterotetramer. N and B are homologous to the FeMo alpha and beta subunits respectively. Also in common with nitrogenase in vitro DPOR activity requires ATP hydrolysis and dithoionite or ferredoxin as electron donor. The NB protein complex may serve as a catalytic site for Pchlide reduction similar to MoFe for nitrogen reduction.
Probab=41.69 E-value=41 Score=30.74 Aligned_cols=35 Identities=9% Similarity=0.249 Sum_probs=26.5
Q ss_pred HHHHHHcCCCCccEEEeCCCchhHHHHHHHcCCCeEeEeC
Q 035856 46 LDAAVSKTGRKISCFLTDAFLTFSGEMARDMHIPWFPVFV 85 (278)
Q Consensus 46 l~~l~~~~~~~~d~vI~D~~~~~~~~vA~~lgIP~v~~~~ 85 (278)
+++++++. +||++|.+. ....+|+++|||.+.++.
T Consensus 362 ~~~~i~~~--~pdliig~~---~~~~~a~~~gip~~~~~~ 396 (430)
T cd01981 362 VGDMIART--EPELIFGTQ---MERHIGKRLDIPCAVISA 396 (430)
T ss_pred HHHHHHhh--CCCEEEecc---hhhHHHHHcCCCEEEEeC
Confidence 44444443 899999987 566789999999988754
No 146
>PF07355 GRDB: Glycine/sarcosine/betaine reductase selenoprotein B (GRDB); InterPro: IPR022787 This entry represents selenoprotein B of glycine reductase, sarcosine reductase, betaine reductase, D-proline reductase, and perhaps others. All members are expected to contain an internal UGA codon, encoding selenocysteine, which may be misinterpreted as a stop codon. ; GO: 0030699 glycine reductase activity, 0050485 oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond, with a disulfide as acceptor, 0055114 oxidation-reduction process, 0030700 glycine reductase complex
Probab=40.86 E-value=67 Score=28.45 Aligned_cols=37 Identities=14% Similarity=0.191 Sum_probs=25.8
Q ss_pred HHHHHHcCCCCccEEEeCCCchh----------HHHHHHHcCCCeEeEe
Q 035856 46 LDAAVSKTGRKISCFLTDAFLTF----------SGEMARDMHIPWFPVF 84 (278)
Q Consensus 46 l~~l~~~~~~~~d~vI~D~~~~~----------~~~vA~~lgIP~v~~~ 84 (278)
+.++++.. +||++|+-+.+-. +..+.++++||.++-.
T Consensus 72 i~~mv~~~--~pD~viaGPaFnagrYG~acg~v~~aV~e~~~IP~vtaM 118 (349)
T PF07355_consen 72 ILEMVKKL--KPDVVIAGPAFNAGRYGVACGEVAKAVQEKLGIPVVTAM 118 (349)
T ss_pred HHHHHHhc--CCCEEEEcCCcCCchHHHHHHHHHHHHHHhhCCCEEEEe
Confidence 34444443 9999999986643 2256779999999653
No 147
>TIGR02470 sucr_synth sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.
Probab=40.22 E-value=42 Score=33.28 Aligned_cols=36 Identities=8% Similarity=0.074 Sum_probs=25.4
Q ss_pred HHHHcCCCCccEEEeCCCc--hhHHHHHHHcCCCeEeE
Q 035856 48 AAVSKTGRKISCFLTDAFL--TFSGEMARDMHIPWFPV 83 (278)
Q Consensus 48 ~l~~~~~~~~d~vI~D~~~--~~~~~vA~~lgIP~v~~ 83 (278)
.+.++.+.+||+|++..-. ..|..+|+++|||.+..
T Consensus 377 ~~~~~~~~~pDlIHahy~d~glva~lla~~lgVP~v~t 414 (784)
T TIGR02470 377 EILAELQGKPDLIIGNYSDGNLVASLLARKLGVTQCTI 414 (784)
T ss_pred HHHHhcCCCCCEEEECCCchHHHHHHHHHhcCCCEEEE
Confidence 3433434589999997633 34678999999997754
No 148
>TIGR01278 DPOR_BchB light-independent protochlorophyllide reductase, B subunit. This enzyme describes the B subunit of the dark form protochlorophyllide reductase, a nitrogenase-like enzyme. This subunit shows homology to the nitrogenase molybdenum-iron protein. It catalyzes a step in bacteriochlorophyll biosynthesis.
Probab=40.14 E-value=46 Score=31.27 Aligned_cols=35 Identities=14% Similarity=0.173 Sum_probs=26.6
Q ss_pred HHHHHHcCCCCccEEEeCCCchhHHHHHHHcCCCeEeEeC
Q 035856 46 LDAAVSKTGRKISCFLTDAFLTFSGEMARDMHIPWFPVFV 85 (278)
Q Consensus 46 l~~l~~~~~~~~d~vI~D~~~~~~~~vA~~lgIP~v~~~~ 85 (278)
+++.+++. +||+||.+. +...+|+++|||++.+..
T Consensus 356 i~~~i~~~--~pdliiG~~---~er~~a~~lgip~~~i~~ 390 (511)
T TIGR01278 356 VADAIAAL--EPELVLGTQ---MERHSAKRLDIPCGVISA 390 (511)
T ss_pred HHHHHHhc--CCCEEEECh---HHHHHHHHcCCCEEEecC
Confidence 33444443 899999986 677899999999987654
No 149
>PLN02846 digalactosyldiacylglycerol synthase
Probab=39.63 E-value=36 Score=31.54 Aligned_cols=39 Identities=18% Similarity=0.392 Sum_probs=30.0
Q ss_pred cCcchhhhcccccccEEEeeCC----chhHHHHHHhCcceeeccc
Q 035856 201 LQAPQTQVLGHFSIGVFVIHSG----ANSVCESIANGVLMICRPF 241 (278)
Q Consensus 201 ~w~pq~~iL~~~~v~~fitHgG----~~s~~eal~~GvP~l~~P~ 241 (278)
+.....+++...+ +||.-+- -++++||+++|+|+|+.-.
T Consensus 290 G~~~~~~~~~~~D--vFv~pS~~Et~g~v~lEAmA~G~PVVa~~~ 332 (462)
T PLN02846 290 GRDHADPLFHDYK--VFLNPSTTDVVCTTTAEALAMGKIVVCANH 332 (462)
T ss_pred CCCCHHHHHHhCC--EEEECCCcccchHHHHHHHHcCCcEEEecC
Confidence 5555566888888 7876532 3789999999999999754
No 150
>PRK04940 hypothetical protein; Provisional
Probab=38.99 E-value=1.1e+02 Score=24.30 Aligned_cols=45 Identities=7% Similarity=-0.079 Sum_probs=29.3
Q ss_pred HHHHHHHHHHcCCCCccEEEeCCC-chhHHHHHHHcCCCeEeEeCC
Q 035856 42 FKKGLDAAVSKTGRKISCFLTDAF-LTFSGEMARDMHIPWFPVFVA 86 (278)
Q Consensus 42 l~~~l~~l~~~~~~~~d~vI~D~~-~~~~~~vA~~lgIP~v~~~~~ 86 (278)
+...++++......++.+||=..+ -+|+..+|++.|+|.|.+-+.
T Consensus 46 l~~~i~~~~~~~~~~~~~liGSSLGGyyA~~La~~~g~~aVLiNPA 91 (180)
T PRK04940 46 LLKEVDKMLQLSDDERPLICGVGLGGYWAERIGFLCGIRQVIFNPN 91 (180)
T ss_pred HHHHHHHhhhccCCCCcEEEEeChHHHHHHHHHHHHCCCEEEECCC
Confidence 444455443321113566666555 579999999999999998654
No 151
>cd03466 Nitrogenase_NifN_2 Nitrogenase_nifN_2: A subgroup of the NifN subunit of the NifEN complex: NifN forms an alpha2beta2 tetramer with NifE. NifN and nifE are structurally homologous to nitrogenase MoFe protein beta and alpha subunits respectively. NifEN participates in the synthesis of the iron-molybdenum cofactor (FeMoco) of the MoFe protein. NifB-co (an iron and sulfur containing precursor of the FeMoco) from NifB is transferred to the NifEN complex where it is further processed to FeMoco. The nifEN bound precursor of FeMoco has been identified as a molybdenum-free, iron- and sulfur- containing analog of FeMoco. It has been suggested that this nifEN bound precursor also acts as a cofactor precursor in nitrogenase systems which require a cofactor other than FeMoco: i.e. iron-vanadium cofactor (FeVco) or iron only cofactor (FeFeco). This group also contains the Clostidium fused NifN-NifB protein.
Probab=38.67 E-value=51 Score=30.18 Aligned_cols=34 Identities=15% Similarity=0.395 Sum_probs=26.1
Q ss_pred HHHHHHcCCCCccEEEeCCCchhHHHHHHHcCCCeEeEe
Q 035856 46 LDAAVSKTGRKISCFLTDAFLTFSGEMARDMHIPWFPVF 84 (278)
Q Consensus 46 l~~l~~~~~~~~d~vI~D~~~~~~~~vA~~lgIP~v~~~ 84 (278)
+++++++. +||++|.+. +...+|+++|||.+...
T Consensus 364 ~~~~l~~~--~~dliiG~s---~~~~~a~~~~ip~~~~~ 397 (429)
T cd03466 364 IESYAKEL--KIDVLIGNS---YGRRIAEKLGIPLIRIG 397 (429)
T ss_pred HHHHHHhc--CCCEEEECc---hhHHHHHHcCCCEEEec
Confidence 44444443 899999987 46799999999998654
No 152
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1
Probab=37.95 E-value=74 Score=21.51 Aligned_cols=21 Identities=19% Similarity=0.199 Sum_probs=17.0
Q ss_pred CCchhHHHHHHhCcceeeccc
Q 035856 221 SGANSVCESIANGVLMICRPF 241 (278)
Q Consensus 221 gG~~s~~eal~~GvP~l~~P~ 241 (278)
+-..-+.|++++|+|+|+-..
T Consensus 10 ~~~~r~~E~~a~G~~vi~~~~ 30 (92)
T PF13524_consen 10 GPNMRIFEAMACGTPVISDDS 30 (92)
T ss_pred CCchHHHHHHHCCCeEEECCh
Confidence 334578999999999999764
No 153
>TIGR01285 nifN nitrogenase molybdenum-iron cofactor biosynthesis protein NifN. This protein forms a complex with NifE, and appears as a NifEN in some species. NifEN is a required for producing the molybdenum-iron cofactor of molybdenum-requiring nitrogenases. NifN is closely related to the nitrogenase molybdenum-iron protein beta chain NifK. This model describes most examples of NifN but excludes some cases, such as the putative NifN of Chlorobium tepidum, for which a separate model may be created.
Probab=37.47 E-value=53 Score=30.10 Aligned_cols=34 Identities=12% Similarity=0.245 Sum_probs=25.9
Q ss_pred HHHHHHcCCCCccEEEeCCCchhHHHHHHHcCCCeEeEe
Q 035856 46 LDAAVSKTGRKISCFLTDAFLTFSGEMARDMHIPWFPVF 84 (278)
Q Consensus 46 l~~l~~~~~~~~d~vI~D~~~~~~~~vA~~lgIP~v~~~ 84 (278)
+++++++. ++|+||... ++..+|+++|||.+.+.
T Consensus 365 l~~~i~~~--~~dliig~s---~~k~~A~~l~ip~ir~g 398 (432)
T TIGR01285 365 LEDLACAA--GADLLITNS---HGRALAQRLALPLVRAG 398 (432)
T ss_pred HHHHHhhc--CCCEEEECc---chHHHHHHcCCCEEEec
Confidence 34444443 899999876 66899999999998653
No 154
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=37.31 E-value=45 Score=30.70 Aligned_cols=75 Identities=16% Similarity=0.193 Sum_probs=42.4
Q ss_pred CCCeEEecCcchh---hhcccccccEEEee---CCc-hhHHHHHHhCcceeeccccCChhHHHHHHHHHh-----cceEE
Q 035856 194 SGRGKIVLQAPQT---QVLGHFSIGVFVIH---SGA-NSVCESIANGVLMICRPFYGDHRMNARMVEEVW-----GIGVK 261 (278)
Q Consensus 194 ~~~~~v~~w~pq~---~iL~~~~v~~fitH---gG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~-----g~G~~ 261 (278)
+.+..+....++. .+++.++ +|+.- -|+ .+.+||+++|+|.|+....+ ....+.+.+ +.|..
T Consensus 345 ~~~v~~~~~~~~~~~~~~~~~aD--v~l~pS~~E~~gl~~lEAma~G~pvI~s~~gg----~~e~v~~~~~~~~~~~G~l 418 (473)
T TIGR02095 345 PGNVRVIIGYDEALAHLIYAGAD--FILMPSRFEPCGLTQLYAMRYGTVPIVRRTGG----LADTVVDGDPEAESGTGFL 418 (473)
T ss_pred CCcEEEEEcCCHHHHHHHHHhCC--EEEeCCCcCCcHHHHHHHHHCCCCeEEccCCC----ccceEecCCCCCCCCceEE
Confidence 3445444434443 4678888 55542 233 37889999999999875432 111122110 56777
Q ss_pred ecCCCcCHHHHHhhh
Q 035856 262 VEGILLTKSGVLQSL 276 (278)
Q Consensus 262 l~~~~~~~~~l~~~i 276 (278)
++.+ +.+++.++|
T Consensus 419 ~~~~--d~~~la~~i 431 (473)
T TIGR02095 419 FEEY--DPGALLAAL 431 (473)
T ss_pred eCCC--CHHHHHHHH
Confidence 6553 456666554
No 155
>PRK03359 putative electron transfer flavoprotein FixA; Reviewed
Probab=37.28 E-value=78 Score=26.80 Aligned_cols=40 Identities=18% Similarity=0.077 Sum_probs=27.7
Q ss_pred HHHHHHHHcCCCCccEEEeCCCc------hhHHHHHHHcCCCeEeEeC
Q 035856 44 KGLDAAVSKTGRKISCFLTDAFL------TFSGEMARDMHIPWFPVFV 85 (278)
Q Consensus 44 ~~l~~l~~~~~~~~d~vI~D~~~------~~~~~vA~~lgIP~v~~~~ 85 (278)
..|.+.+++. .+|+|++-... .-+..+|+.||+|++++.+
T Consensus 102 ~~La~ai~~~--~~DLVl~G~~s~D~~tgqvg~~lAe~Lg~P~vt~v~ 147 (256)
T PRK03359 102 SALAAAAQKA--GFDLILCGDGSSDLYAQQVGLLVGEILNIPAINGVS 147 (256)
T ss_pred HHHHHHHHHh--CCCEEEEcCccccCCCCcHHHHHHHHhCCCceeeEE
Confidence 3344444443 69999985433 2467899999999998764
No 156
>PRK02910 light-independent protochlorophyllide reductase subunit B; Provisional
Probab=37.26 E-value=55 Score=30.83 Aligned_cols=34 Identities=15% Similarity=0.236 Sum_probs=25.7
Q ss_pred HHHHHHcCCCCccEEEeCCCchhHHHHHHHcCCCeEeEe
Q 035856 46 LDAAVSKTGRKISCFLTDAFLTFSGEMARDMHIPWFPVF 84 (278)
Q Consensus 46 l~~l~~~~~~~~d~vI~D~~~~~~~~vA~~lgIP~v~~~ 84 (278)
+++.+++. +||+||.+. ....+|+++|||++.++
T Consensus 354 l~~~i~~~--~PdliiG~~---~er~~a~~lgiP~~~i~ 387 (519)
T PRK02910 354 VEDAIAEA--APELVLGTQ---MERHSAKRLGIPCAVIS 387 (519)
T ss_pred HHHHHHhc--CCCEEEEcc---hHHHHHHHcCCCEEEec
Confidence 33334443 899999876 67789999999998765
No 157
>PF07894 DUF1669: Protein of unknown function (DUF1669); InterPro: IPR012461 This family is composed of sequences derived from hypothetical eukaryotic proteins of unknown function. Some members of this family are annotated as being potential phospholipases but no literature was found to support this.
Probab=37.11 E-value=67 Score=27.61 Aligned_cols=47 Identities=15% Similarity=0.253 Sum_probs=36.4
Q ss_pred hHHHHHHHHHHHHcCCCCccEEEeCCCchh-----HHHHHHHcCCCeEeEeCC
Q 035856 39 PENFKKGLDAAVSKTGRKISCFLTDAFLTF-----SGEMARDMHIPWFPVFVA 86 (278)
Q Consensus 39 ~~~l~~~l~~l~~~~~~~~d~vI~D~~~~~-----~~~vA~~lgIP~v~~~~~ 86 (278)
...+++.+++++++. .++=+||-|.|.-. -.++|.+.+||++.+.-.
T Consensus 132 ~p~IKE~vR~~I~~A-~kVIAIVMD~FTD~dIf~DLleAa~kR~VpVYiLLD~ 183 (284)
T PF07894_consen 132 QPHIKEVVRRMIQQA-QKVIAIVMDVFTDVDIFCDLLEAANKRGVPVYILLDE 183 (284)
T ss_pred CCCHHHHHHHHHHHh-cceeEEEeeccccHHHHHHHHHHHHhcCCcEEEEech
Confidence 356888888888776 68999999987542 347788999999987643
No 158
>PF06345 Drf_DAD: DRF Autoregulatory Domain; InterPro: IPR010465 This domain is found in Diaphanous-related formins (Drfs). It binds the N-terminal GTPase-binding domain; this link is broken when GTP-bound Rho binds to the GBD and activates the protein. The addition of diaphanous activating domains (DAD) to mammalian cells induces actin filament formation, stabilises microtubules, and activates serum-response mediated transcription [].; PDB: 3O4X_H 3OBV_E 2BAP_C 2F31_B.
Probab=36.99 E-value=29 Score=15.09 Aligned_cols=12 Identities=25% Similarity=0.484 Sum_probs=9.3
Q ss_pred chhHHHHHHhCc
Q 035856 223 ANSVCESIANGV 234 (278)
Q Consensus 223 ~~s~~eal~~Gv 234 (278)
+.|.+|||..|.
T Consensus 3 mdsllealqtg~ 14 (15)
T PF06345_consen 3 MDSLLEALQTGS 14 (15)
T ss_dssp HHHHHHHHHHST
T ss_pred HHHHHHHHHccC
Confidence 568899988774
No 159
>PRK12311 rpsB 30S ribosomal protein S2/unknown domain fusion protein; Provisional
Probab=36.23 E-value=47 Score=29.21 Aligned_cols=36 Identities=11% Similarity=-0.024 Sum_probs=27.1
Q ss_pred CCccEE-EeCCC-chhHHHHHHHcCCCeEeEeCChhhh
Q 035856 55 RKISCF-LTDAF-LTFSGEMARDMHIPWFPVFVAMPYN 90 (278)
Q Consensus 55 ~~~d~v-I~D~~-~~~~~~vA~~lgIP~v~~~~~~~~~ 90 (278)
..||+| |.|.. -..+..-|.++|||.|.+.-+.+.+
T Consensus 151 ~~Pd~viv~d~~~e~~AI~EA~kl~IPvIaivDTn~dp 188 (326)
T PRK12311 151 GLPDLLFVIDTNKEDIAIQEAQRLGIPVAAIVDTNCDP 188 (326)
T ss_pred cCCCEEEEeCCccchHHHHHHHHcCCCEEEEeeCCCCc
Confidence 468877 55664 3567888999999999998766544
No 160
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=36.15 E-value=49 Score=33.93 Aligned_cols=30 Identities=3% Similarity=-0.166 Sum_probs=22.6
Q ss_pred CccEEEeCCCc--hhHHHHHHHcCCCeEeEeC
Q 035856 56 KISCFLTDAFL--TFSGEMARDMHIPWFPVFV 85 (278)
Q Consensus 56 ~~d~vI~D~~~--~~~~~vA~~lgIP~v~~~~ 85 (278)
.||+|-+.... ..+..+++.+|||.|.+..
T Consensus 310 ~pDvIHaHyw~sG~aa~~L~~~lgVP~V~T~H 341 (1050)
T TIGR02468 310 WPYVIHGHYADAGDSAALLSGALNVPMVLTGH 341 (1050)
T ss_pred CCCEEEECcchHHHHHHHHHHhhCCCEEEECc
Confidence 59999888532 3467889999999886544
No 161
>cd07035 TPP_PYR_POX_like Pyrimidine (PYR) binding domain of POX and related proteins. Thiamine pyrophosphate (TPP family), pyrimidine (PYR) binding domain of pyruvate oxidase (POX) and related protiens subfamily. The PYR domain is found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. TPP binds in the cleft formed by a PYR domain and a PP domain. The PYR domain, binds the aminopyrimidine ring of TPP, the PP domain binds the diphosphate residue. A polar interaction between the conserved glutamate of the PYR domain and the N1' of the TPP aminopyrimidine ring is shared by most TPP-dependent enzymes, and participates in the activation of TPP. For glyoxylate carboligase, which belongs to this subfamily, but lacks this conserved glutamate, the rate of the initial TPP activation step is reduced but the ensuing steps of the enzymic reaction proceed efficiently. The PYR and PP domains have a common fold, but do not share strong sequence conservatio
Probab=35.92 E-value=99 Score=23.37 Aligned_cols=27 Identities=15% Similarity=0.384 Sum_probs=21.7
Q ss_pred ccEEEeeCC------chhHHHHHHhCcceeecc
Q 035856 214 IGVFVIHSG------ANSVCESIANGVLMICRP 240 (278)
Q Consensus 214 v~~fitHgG------~~s~~eal~~GvP~l~~P 240 (278)
++++++|+| .+.+.+|...++|+|.+.
T Consensus 60 ~~v~~~~~gpG~~n~~~~l~~A~~~~~Pll~i~ 92 (155)
T cd07035 60 PGVVLVTSGPGLTNAVTGLANAYLDSIPLLVIT 92 (155)
T ss_pred CEEEEEcCCCcHHHHHHHHHHHHhhCCCEEEEe
Confidence 448888866 467889999999999985
No 162
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=35.35 E-value=24 Score=32.39 Aligned_cols=78 Identities=19% Similarity=0.264 Sum_probs=42.5
Q ss_pred CCCeEEe-cCcch--hhhcccccccEEEee-----CCchhHHHHHHhCcceeeccccC--ChhHHHHHHHHHhcceEEec
Q 035856 194 SGRGKIV-LQAPQ--TQVLGHFSIGVFVIH-----SGANSVCESIANGVLMICRPFYG--DHRMNARMVEEVWGIGVKVE 263 (278)
Q Consensus 194 ~~~~~v~-~w~pq--~~iL~~~~v~~fitH-----gG~~s~~eal~~GvP~l~~P~~~--DQ~~na~~~~~~~g~G~~l~ 263 (278)
.++..+. .+... ..+++.++ +|+.- || .+.+||+++|+|+|+....+ |...+.....+. |.|..++
T Consensus 350 ~~~v~~~~~~~~~~~~~~~~~aD--v~l~pS~~E~~g-l~~lEAma~G~pvI~~~~gg~~e~v~~~~~~~~~-~~G~~~~ 425 (476)
T cd03791 350 PGRVAVLIGYDEALAHLIYAGAD--FFLMPSRFEPCG-LTQMYAMRYGTVPIVRATGGLADTVIDYNEDTGE-GTGFVFE 425 (476)
T ss_pred CCcEEEEEeCCHHHHHHHHHhCC--EEECCCCCCCCc-HHHHHHhhCCCCCEECcCCCccceEeCCcCCCCC-CCeEEeC
Confidence 3555544 44322 24667777 55532 33 47899999999999865432 211111000122 4788776
Q ss_pred CCCcCHHHHHhhhh
Q 035856 264 GILLTKSGVLQSLD 277 (278)
Q Consensus 264 ~~~~~~~~l~~~i~ 277 (278)
.. +.+++.++++
T Consensus 426 ~~--~~~~l~~~i~ 437 (476)
T cd03791 426 GY--NADALLAALR 437 (476)
T ss_pred CC--CHHHHHHHHH
Confidence 54 4666666553
No 163
>TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1. This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=34.51 E-value=24 Score=33.18 Aligned_cols=41 Identities=15% Similarity=0.159 Sum_probs=30.6
Q ss_pred CCeEEecCcch---hhhcccccccEEEeeC---CchhHHHHHHhCccee
Q 035856 195 GRGKIVLQAPQ---TQVLGHFSIGVFVIHS---GANSVCESIANGVLMI 237 (278)
Q Consensus 195 ~~~~v~~w~pq---~~iL~~~~v~~fitHg---G~~s~~eal~~GvP~l 237 (278)
.++.+.++... ..++.++. ++|.=+ |.++.+||+.+|+|+|
T Consensus 409 ~~v~f~gy~~e~dl~~~~~~ar--l~id~s~~eg~~~~ieAiS~GiPqI 455 (519)
T TIGR03713 409 ERIAFTTLTNEEDLISALDKLR--LIIDLSKEPDLYTQISGISAGIPQI 455 (519)
T ss_pred cEEEEEecCCHHHHHHHHhhhe--EEEECCCCCChHHHHHHHHcCCCee
Confidence 45555677763 45677777 777644 6789999999999999
No 164
>COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane]
Probab=34.49 E-value=1.3e+02 Score=26.98 Aligned_cols=66 Identities=12% Similarity=0.070 Sum_probs=37.3
Q ss_pred hcccccccEEEeeCCchhHHHHHHhCcceeeccccCC--hhHHHHHHHHHhcceEE-------e----cCCCcCHHHHHh
Q 035856 208 VLGHFSIGVFVIHSGANSVCESIANGVLMICRPFYGD--HRMNARMVEEVWGIGVK-------V----EGILLTKSGVLQ 274 (278)
Q Consensus 208 iL~~~~v~~fitHgG~~s~~eal~~GvP~l~~P~~~D--Q~~na~~~~~~~g~G~~-------l----~~~~~~~~~l~~ 274 (278)
.+..++ +.+.-+| .-++|+..+|+|||+.=- .+ -+..+++....|-+++- + -.+.++++.|.+
T Consensus 261 a~~~aD--~al~aSG-T~tLE~aL~g~P~Vv~Yk-~~~it~~iak~lvk~~yisLpNIi~~~~ivPEliq~~~~pe~la~ 336 (381)
T COG0763 261 AFAAAD--AALAASG-TATLEAALAGTPMVVAYK-VKPITYFIAKRLVKLPYVSLPNILAGREIVPELIQEDCTPENLAR 336 (381)
T ss_pred HHHHhh--HHHHhcc-HHHHHHHHhCCCEEEEEe-ccHHHHHHHHHhccCCcccchHHhcCCccchHHHhhhcCHHHHHH
Confidence 455566 5566666 347899999999997521 11 12344554444333322 1 123567777776
Q ss_pred hhh
Q 035856 275 SLD 277 (278)
Q Consensus 275 ~i~ 277 (278)
++.
T Consensus 337 ~l~ 339 (381)
T COG0763 337 ALE 339 (381)
T ss_pred HHH
Confidence 653
No 165
>cd01965 Nitrogenase_MoFe_beta_like Nitrogenase_MoFe_beta_like: Nitrogenase MoFe protein, beta subunit_like. The nitrogenase enzyme catalyzes the ATP-dependent reduction of dinitrogen (N2) to ammonia. This group contains the beta subunits of component 1 of the three known genetically distinct types of nitrogenase systems: a molybdenum-dependent nitrogenase (Mo-nitrogenase), a vanadium-dependent nitrogenase (V-nitrogenase), and an iron-only nitrogenase (Fe-nitrogenase). These nitrogenase systems consist of component 1 (MoFe protein, VFe protein or, FeFe protein respectively) and, component 2 (Fe protein). The most widespread and best characterized of these systems is the Mo-nitrogenase. MoFe is an alpha2beta2 tetramer, the alternative nitrogenases are alpha2beta2delta2 hexamers having alpha and beta subunits similar to the alpha and beta subunits of MoFe. For MoFe, each alphabeta pair contains one P-cluster (at the alphabeta interface) and, one molecule of iron molybdenum cofactor (Fe
Probab=34.27 E-value=63 Score=29.50 Aligned_cols=26 Identities=23% Similarity=0.378 Sum_probs=22.3
Q ss_pred CccEEEeCCCchhHHHHHHHcCCCeEeEe
Q 035856 56 KISCFLTDAFLTFSGEMARDMHIPWFPVF 84 (278)
Q Consensus 56 ~~d~vI~D~~~~~~~~vA~~lgIP~v~~~ 84 (278)
+||++|.+. ....+|+++|+|.+.+.
T Consensus 371 ~pdliig~~---~~~~~a~~~~ip~i~~~ 396 (428)
T cd01965 371 PVDLLIGNS---HGRYLARDLGIPLVRVG 396 (428)
T ss_pred CCCEEEECc---hhHHHHHhcCCCEEEec
Confidence 899999997 45789999999998654
No 166
>PHA01630 putative group 1 glycosyl transferase
Probab=34.14 E-value=33 Score=30.16 Aligned_cols=41 Identities=15% Similarity=0.214 Sum_probs=27.2
Q ss_pred Ccchhh---hcccccccEEEee-CC-chhHHHHHHhCcceeecccc
Q 035856 202 QAPQTQ---VLGHFSIGVFVIH-SG-ANSVCESIANGVLMICRPFY 242 (278)
Q Consensus 202 w~pq~~---iL~~~~v~~fitH-gG-~~s~~eal~~GvP~l~~P~~ 242 (278)
++|+.+ +++.+++-++-++ -| -.+++||+++|+|+|+.-..
T Consensus 197 ~v~~~~l~~~y~~aDv~v~pS~~E~fgl~~lEAMA~G~PVIas~~g 242 (331)
T PHA01630 197 PLPDDDIYSLFAGCDILFYPVRGGAFEIPVIEALALGLDVVVTEKG 242 (331)
T ss_pred cCCHHHHHHHHHhCCEEEECCccccCChHHHHHHHcCCCEEEeCCC
Confidence 366554 5778883333232 33 36889999999999997643
No 167
>PRK13608 diacylglycerol glucosyltransferase; Provisional
Probab=34.13 E-value=58 Score=29.22 Aligned_cols=38 Identities=18% Similarity=0.113 Sum_probs=22.9
Q ss_pred HHHHHHcCCCCccEEEeCCCchhHHHH--HHHcCCCeEeEeC
Q 035856 46 LDAAVSKTGRKISCFLTDAFLTFSGEM--ARDMHIPWFPVFV 85 (278)
Q Consensus 46 l~~l~~~~~~~~d~vI~D~~~~~~~~v--A~~lgIP~v~~~~ 85 (278)
+.+++++ .+||+||++........+ +..++||.+...+
T Consensus 96 l~~~l~~--~kPDvVi~~~p~~~~~~l~~~~~~~iP~~~v~t 135 (391)
T PRK13608 96 LINLLIK--EKPDLILLTFPTPVMSVLTEQFNINIPVATVMT 135 (391)
T ss_pred HHHHHHH--hCcCEEEECCcHHHHHHHHHhcCCCCCEEEEeC
Confidence 4444554 399999998654432222 2356899876544
No 168
>PF01497 Peripla_BP_2: Periplasmic binding protein; InterPro: IPR002491 ABC transporters belong to the ATP-Binding Cassette (ABC) superfamily, which uses the hydrolysis of ATP to energise diverse biological systems. ABC transporters minimally consist of two conserved regions: a highly conserved ATP binding cassette (ABC) and a less conserved transmembrane domain (TMD). These can be found on the same protein or on two different ones. Most ABC transporters function as a dimer and therefore are constituted of four domains, two ABC modules and two TMDs. ABC transporters are involved in the export or import of a wide variety of substrates ranging from small ions to macromolecules. The major function of ABC import systems is to provide essential nutrients to bacteria. They are found only in prokaryotes and their four constitutive domains are usually encoded by independent polypeptides (two ABC proteins and two TMD proteins). Prokaryotic importers require additional extracytoplasmic binding proteins (one or more per systems) for function. In contrast, export systems are involved in the extrusion of noxious substances, the export of extracellular toxins and the targeting of membrane components. They are found in all living organisms and in general the TMD is fused to the ABC module in a variety of combinations. Some eukaryotic exporters encode the four domains on the same polypeptide chain []. The ABC module (approximately two hundred amino acid residues) is known to bind and hydrolyse ATP, thereby coupling transport to ATP hydrolysis in a large number of biological processes. The cassette is duplicated in several subfamilies. Its primary sequence is highly conserved, displaying a typical phosphate-binding loop: Walker A, and a magnesium binding site: Walker B. Besides these two regions, three other conserved motifs are present in the ABC cassette: the switch region which contains a histidine loop, postulated to polarise the attaching water molecule for hydrolysis, the signature conserved motif (LSGGQ) specific to the ABC transporter, and the Q-motif (between Walker A and the signature), which interacts with the gamma phosphate through a water bond. The Walker A, Walker B, Q-loop and switch region form the nucleotide binding site [, , ]. The 3D structure of a monomeric ABC module adopts a stubby L-shape with two distinct arms. ArmI (mainly beta-strand) contains Walker A and Walker B. The important residues for ATP hydrolysis and/or binding are located in the P-loop. The ATP-binding pocket is located at the extremity of armI. The perpendicular armII contains mostly the alpha helical subdomain with the signature motif. It only seems to be required for structural integrity of the ABC module. ArmII is in direct contact with the TMD. The hinge between armI and armII contains both the histidine loop and the Q-loop, making contact with the gamma phosphate of the ATP molecule. ATP hydrolysis leads to a conformational change that could facilitate ADP release. In the dimer the two ABC cassettes contact each other through hydrophobic interactions at the antiparallel beta-sheet of armI by a two-fold axis [, , , , , ]. The ATP-Binding Cassette (ABC) superfamily forms one of the largest of all protein families with a diversity of physiological functions []. Several studies have shown that there is a correlation between the functional characterisation and the phylogenetic classification of the ABC cassette [, ]. More than 50 subfamilies have been described based on a phylogenetic and functional classification [, , ]; (for further information see http://www.tcdb.org/tcdb/index.php?tc=3.A.1). Most bacterial importers employ a periplasmic substrate-binding protein (PBP) that delivers the ligand to the extracellular gate of the TM domains. These proteins bind their substrates selectively and with high affinity, which is thought to ensure the specificity of the transport reaction. Binding proteins in Gram-negative bacteria are present within the periplasm, whereas those in Gram-positive bacteria are tethered to the cell membrane via the acylation of a cysteine residue that is an integral component of a lipoprotein signal sequence. In planta expression of a high-affinity iron-uptake system involving the siderophore chrysobactin in Erwinia chrysanthemi 3937 contributes greatly to invasive growth of this pathogen on its natural host, African violets []. The cobalamin (vitamin B12) and the iron transport systems share many common attributes and probably evolved from the same origin [, ]. The periplasmic-binding domain is composed of two subdomains, each consisting of a central beta-sheet and surrounding alpha-helices, linked by a rigid alpha-helix. The substrate binding site is located in a cleft between the two alpha/beta subdomains [].; GO: 0005488 binding; PDB: 2X4L_A 1N4A_B 1N2Z_B 1N4D_B 4DBL_J 2QI9_F 3EIW_A 3EIX_A 3MWG_A 3MWF_A ....
Probab=33.97 E-value=68 Score=26.02 Aligned_cols=40 Identities=18% Similarity=0.125 Sum_probs=27.6
Q ss_pred HHHHHHHcCCCCccEEEeCCCc--hhHHHHHHHcCCCeEeEeCCh
Q 035856 45 GLDAAVSKTGRKISCFLTDAFL--TFSGEMARDMHIPWFPVFVAM 87 (278)
Q Consensus 45 ~l~~l~~~~~~~~d~vI~D~~~--~~~~~vA~~lgIP~v~~~~~~ 87 (278)
.++++++- +||+||..... .....-..+.+||.+.+....
T Consensus 52 ~~E~i~~l---~PDlIi~~~~~~~~~~~~~~~~~~ip~~~~~~~~ 93 (238)
T PF01497_consen 52 NLEAILAL---KPDLIIGSSFYGQSEEIEKLLEAGIPVVVFDSSS 93 (238)
T ss_dssp -HHHHHHT-----SEEEEETTSSCHHHHHHHHHTTSEEEEESSTT
T ss_pred cHHHHHhC---CCCEEEEeccccchHHHHHHhcccceEEEeeccc
Confidence 45666553 99999988766 455666778899999987755
No 169
>cd01147 HemV-2 Metal binding protein HemV-2. These proteins are predicted to function as initial receptors in ABC transport of metal ions. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=33.42 E-value=72 Score=26.45 Aligned_cols=40 Identities=8% Similarity=0.010 Sum_probs=26.0
Q ss_pred HHHHHHHHcCCCCccEEEeCCCchh---HHHHHHHcCCCeEeEeCC
Q 035856 44 KGLDAAVSKTGRKISCFLTDAFLTF---SGEMARDMHIPWFPVFVA 86 (278)
Q Consensus 44 ~~l~~l~~~~~~~~d~vI~D~~~~~---~~~vA~~lgIP~v~~~~~ 86 (278)
.-++++++. +||+||....... ...+.++.|||++.+...
T Consensus 65 ~n~E~i~~l---~PDLIi~~~~~~~~~~~~~l~~~~gipvv~~~~~ 107 (262)
T cd01147 65 PNYEKIAAL---KPDVVIDVGSDDPTSIADDLQKKTGIPVVVLDGG 107 (262)
T ss_pred CCHHHHHhc---CCCEEEEecCCccchhHHHHHHhhCCCEEEEecC
Confidence 456666554 9999998754332 223444589999887643
No 170
>TIGR01286 nifK nitrogenase molybdenum-iron protein beta chain. This model represents the majority of known sequences of the nitrogenase molybdenum-iron protein beta subunit. A distinct clade in a phylogenetic tree contains molybdenum-iron, vanadium-iron, and iron-iron forms of nitrogenase beta subunit and is excluded from this model. Nitrogenase, also called dinitrogenase, is responsible for nitrogen fixation. Note: the trusted cutoff score has recently been lowered to include an additional family in which the beta subunit is shorter by about 50 amino acids at the N-terminus. In species with the shorter form of the beta subunit, the alpha subunit has a novel insert of similar length.
Probab=32.79 E-value=72 Score=30.07 Aligned_cols=26 Identities=12% Similarity=0.362 Sum_probs=22.4
Q ss_pred CccEEEeCCCchhHHHHHHHcCCCeEeEe
Q 035856 56 KISCFLTDAFLTFSGEMARDMHIPWFPVF 84 (278)
Q Consensus 56 ~~d~vI~D~~~~~~~~vA~~lgIP~v~~~ 84 (278)
+||++|... .+..+|+++|||.+.+.
T Consensus 437 ~~DlliG~s---~~k~~a~~~giPlir~g 462 (515)
T TIGR01286 437 PVDFLIGNS---YGKYIQRDTLVPLIRIG 462 (515)
T ss_pred CCCEEEECc---hHHHHHHHcCCCEEEec
Confidence 899999876 57899999999998764
No 171
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=31.84 E-value=1.1e+02 Score=26.81 Aligned_cols=36 Identities=19% Similarity=0.083 Sum_probs=25.3
Q ss_pred HHHHHHcCCCCccEEEeC--CCc-hhHHHHHHHcCCCeEeE
Q 035856 46 LDAAVSKTGRKISCFLTD--AFL-TFSGEMARDMHIPWFPV 83 (278)
Q Consensus 46 l~~l~~~~~~~~d~vI~D--~~~-~~~~~vA~~lgIP~v~~ 83 (278)
+++++++. +||+|++- ... ..+..+|..+|||.+..
T Consensus 78 l~~~l~~~--~pDiv~~~gd~~~~la~a~aa~~~~ipv~h~ 116 (365)
T TIGR00236 78 LEELLLEE--KPDIVLVQGDTTTTLAGALAAFYLQIPVGHV 116 (365)
T ss_pred HHHHHHHc--CCCEEEEeCCchHHHHHHHHHHHhCCCEEEE
Confidence 44444443 89999885 332 45788899999999854
No 172
>cd01980 Chlide_reductase_Y Chlide_reductase_Y : Y subunit of chlorophyllide (chlide) reductase (BchY). Chlide reductase participates in photosynthetic pigment synthesis playing a role in the conversion of chlorophylls(Chl) into bacteriochlorophylls (BChl). Chlide reductase catalyzes the reduction of the B-ring of the tetrapyrolle. Chlide reductase is a three subunit enzyme (subunits are designated BchX, BchY and BchZ). The similarity between these three subunits and the subunits for nitrogenase suggests that BchX serves as an electron donor for the BchY-BchY catalytic subunits.
Probab=31.79 E-value=84 Score=28.61 Aligned_cols=28 Identities=11% Similarity=-0.045 Sum_probs=23.1
Q ss_pred CCccEEEeCCCchhHHHHHHHcCCCeEeEeC
Q 035856 55 RKISCFLTDAFLTFSGEMARDMHIPWFPVFV 85 (278)
Q Consensus 55 ~~~d~vI~D~~~~~~~~vA~~lgIP~v~~~~ 85 (278)
.+||++|... -+..+|+++|||.+.+..
T Consensus 349 ~~pDl~Ig~s---~~~~~a~~~giP~~r~~~ 376 (416)
T cd01980 349 YRPDLAIGTT---PLVQYAKEKGIPALYYTN 376 (416)
T ss_pred cCCCEEEeCC---hhhHHHHHhCCCEEEecC
Confidence 3999999873 577899999999988643
No 173
>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc). The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st
Probab=31.64 E-value=1.2e+02 Score=26.48 Aligned_cols=29 Identities=21% Similarity=-0.054 Sum_probs=21.6
Q ss_pred CccEEEeCCC---chhHHHHHHHcCCCeEeEe
Q 035856 56 KISCFLTDAF---LTFSGEMARDMHIPWFPVF 84 (278)
Q Consensus 56 ~~d~vI~D~~---~~~~~~vA~~lgIP~v~~~ 84 (278)
+||+|++-.. ..++..+|+.+|||++.+.
T Consensus 88 ~pDvV~~~g~~~~~~~~~~aa~~~~iPvv~~~ 119 (363)
T cd03786 88 KPDLVLVLGDTNETLAAALAAFKLGIPVAHVE 119 (363)
T ss_pred CCCEEEEeCCchHHHHHHHHHHHcCCCEEEEe
Confidence 8999987632 2346778889999988653
No 174
>PRK12342 hypothetical protein; Provisional
Probab=31.45 E-value=1.1e+02 Score=25.82 Aligned_cols=39 Identities=15% Similarity=0.117 Sum_probs=27.0
Q ss_pred HHHHHHHcCCCCccEEEeCCCch------hHHHHHHHcCCCeEeEeC
Q 035856 45 GLDAAVSKTGRKISCFLTDAFLT------FSGEMARDMHIPWFPVFV 85 (278)
Q Consensus 45 ~l~~l~~~~~~~~d~vI~D~~~~------~~~~vA~~lgIP~v~~~~ 85 (278)
.|.+.++.. .+|+|++-.... -+..+|+.||+|++++..
T Consensus 100 ~La~~i~~~--~~DLVl~G~~s~D~~tgqvg~~lA~~Lg~P~vt~v~ 144 (254)
T PRK12342 100 ALAAAIEKI--GFDLLLFGEGSGDLYAQQVGLLLGELLQLPVINAVS 144 (254)
T ss_pred HHHHHHHHh--CCCEEEEcCCcccCCCCCHHHHHHHHhCCCcEeeEE
Confidence 344444443 599999854332 377999999999998754
No 175
>TIGR01917 gly_red_sel_B glycine reductase, selenoprotein B. Glycine reductase is a complex with two selenoprotein subunits, A and B. This model represents the glycine reductase selenoprotein B. Closely related to it, but excluded from this model, are selenoprotein B subunits of betaine reductase and sarcosine reductase. All contain selenocysteine incorporated during translation at a specific UGA codon.
Probab=31.33 E-value=1.1e+02 Score=28.02 Aligned_cols=38 Identities=8% Similarity=0.170 Sum_probs=26.3
Q ss_pred HHHHHHHcCCCCccEEEeCCCchh----------HHHHHHHcCCCeEeEe
Q 035856 45 GLDAAVSKTGRKISCFLTDAFLTF----------SGEMARDMHIPWFPVF 84 (278)
Q Consensus 45 ~l~~l~~~~~~~~d~vI~D~~~~~----------~~~vA~~lgIP~v~~~ 84 (278)
-+.+++++. +||++|+-+.+-. +..+.+++|||.++-.
T Consensus 67 ~i~~mv~k~--~pDv~iaGPaFNagrYG~acg~va~aV~e~~~IP~vtaM 114 (431)
T TIGR01917 67 KVLEMIKGA--NPDIFIAGPAFNAGRYGMAAGAITKAVQDELGIKAFTAM 114 (431)
T ss_pred HHHHHHHhc--CCCEEEEcCccCCccHHHHHHHHHHHHHHhhCCCeEEEe
Confidence 344444544 9999999986643 2246678999999754
No 176
>TIGR01918 various_sel_PB selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family. This model represents selenoprotein B of glycine reductase, sarcosine reductase, betaine reductase, D-proline reductase, and perhaps others. This model is built in fragment mode to assist in recognizing fragmentary translations. All members are expected to contain an internal TGA codon, encoding selenocysteine, which may be misinterpreted as a stop codon.
Probab=31.18 E-value=1.1e+02 Score=27.97 Aligned_cols=37 Identities=5% Similarity=0.154 Sum_probs=25.9
Q ss_pred HHHHHHcCCCCccEEEeCCCchh----------HHHHHHHcCCCeEeEe
Q 035856 46 LDAAVSKTGRKISCFLTDAFLTF----------SGEMARDMHIPWFPVF 84 (278)
Q Consensus 46 l~~l~~~~~~~~d~vI~D~~~~~----------~~~vA~~lgIP~v~~~ 84 (278)
+.+++++. +||++|+-+.+-. +..+.+++|||.++-.
T Consensus 68 i~~mv~k~--~pDv~iaGPaFNagrYG~acg~va~aV~e~~~IP~vt~M 114 (431)
T TIGR01918 68 VLEMLKDK--EPDIFIAGPAFNAGRYGVACGEICKVVQDKLNVPAVTSM 114 (431)
T ss_pred HHHHHHhc--CCCEEEEcCccCCccHHHHHHHHHHHHHHhhCCCeEEEe
Confidence 44444444 9999999986643 2246678999999754
No 177
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=30.79 E-value=1.1e+02 Score=27.03 Aligned_cols=31 Identities=19% Similarity=0.065 Sum_probs=20.5
Q ss_pred CccEEEe--CCC-chhHHHHHHHcCCCeEeEeCC
Q 035856 56 KISCFLT--DAF-LTFSGEMARDMHIPWFPVFVA 86 (278)
Q Consensus 56 ~~d~vI~--D~~-~~~~~~vA~~lgIP~v~~~~~ 86 (278)
+||+||+ |.+ +..+..+|..++||.+=.-..
T Consensus 67 ~Pd~Vlv~GD~~~~la~alaA~~~~ipv~HieaG 100 (346)
T PF02350_consen 67 KPDAVLVLGDRNEALAAALAAFYLNIPVAHIEAG 100 (346)
T ss_dssp T-SEEEEETTSHHHHHHHHHHHHTT-EEEEES--
T ss_pred CCCEEEEEcCCchHHHHHHHHHHhCCCEEEecCC
Confidence 8998876 655 345688999999997766544
No 178
>PF00391 PEP-utilizers: PEP-utilising enzyme, mobile domain; InterPro: IPR008279 A number of enzymes that catalyze the transfer of a phosphoryl group from phosphoenolpyruvate (PEP) via a phospho-histidine intermediate have been shown to be structurally related [, , , ]. All these enzymes share the same catalytic mechanism: they bind PEP and transfer the phosphoryl group from it to a histidine residue. This domain is a "swivelling" beta/beta/alpha domain which is thought to be mobile in all proteins known to contain it []. It is often found associated with the pyruvate phosphate dikinase, PEP/pyruvate-binding domain (IPR002192 from INTERPRO) at its N terminus.; GO: 0016772 transferase activity, transferring phosphorus-containing groups, 0016310 phosphorylation; PDB: 2X0S_A 2OLS_A 2HRO_A 2E28_A 2WQD_A 3T05_D 3T0T_D 3T07_B 2DIK_A 2FM4_A ....
Probab=30.72 E-value=74 Score=21.33 Aligned_cols=29 Identities=17% Similarity=0.285 Sum_probs=20.6
Q ss_pred CccEEEeCCC--chhHHHHHHHcCCCeEeEe
Q 035856 56 KISCFLTDAF--LTFSGEMARDMHIPWFPVF 84 (278)
Q Consensus 56 ~~d~vI~D~~--~~~~~~vA~~lgIP~v~~~ 84 (278)
++.-||++.- ...+..+|+++|||++.-.
T Consensus 30 ~~~Giv~~~Gg~~SH~aIlAr~~giP~ivg~ 60 (80)
T PF00391_consen 30 RVAGIVTEEGGPTSHAAILARELGIPAIVGV 60 (80)
T ss_dssp TSSEEEESSSSTTSHHHHHHHHTT-EEEEST
T ss_pred heEEEEEEcCCccchHHHHHHHcCCCEEEee
Confidence 6667777763 4567789999999998743
No 179
>cd01976 Nitrogenase_MoFe_alpha Nitrogenase_MoFe_alpha_II: Nitrogenase MoFe protein, beta subunit. A group of proteins similar to the alpha subunit of the MoFe protein of the molybdenum (Mo-) nitrogenase. The nitrogenase enzyme catalyzes the ATP-dependent reduction of dinitrogen to ammonia. The Mo-nitrogenase is the most widespread and best characterized of these systems. Mo-nitrogenase consists of the MoFe protein (component 1) and the Fe protein (component 2). MoFe is an alpha2beta2 tetramer. Each alphabeta pair of MoFe contains one P-cluster (at the alphabeta interface) and, one molecule of iron molybdenum cofactor (FeMoco) contained within the alpha subunit. The Fe protein contains a single [4Fe-4S] cluster. Electrons are transferred from the [4Fe-4S] cluster of the Fe protein to the P-cluster of the MoFe and in turn to FeMoCo, the site of substrate reduction.
Probab=30.42 E-value=69 Score=29.25 Aligned_cols=26 Identities=15% Similarity=0.100 Sum_probs=22.4
Q ss_pred CccEEEeCCCchhHHHHHHHcCCCeEeEe
Q 035856 56 KISCFLTDAFLTFSGEMARDMHIPWFPVF 84 (278)
Q Consensus 56 ~~d~vI~D~~~~~~~~vA~~lgIP~v~~~ 84 (278)
+||++|.... ...+|+++|||...+.
T Consensus 369 ~pDliig~~~---~~~~a~k~giP~~~~~ 394 (421)
T cd01976 369 KPDLIGSGIK---EKYVFQKMGIPFRQMH 394 (421)
T ss_pred CCCEEEecCc---chhhhhhcCCCeEeCC
Confidence 9999999874 6788999999998764
No 180
>cd01974 Nitrogenase_MoFe_beta Nitrogenase_MoFe_beta: Nitrogenase MoFe protein, beta subunit. The nitrogenase enzyme catalyzes the ATP-dependent reduction of dinitrogen to ammonia. The Molybdenum (Mo-) nitrogenase is the most widespread and best characterized of these systems. Mo-nitrogenase consists of the MoFe protein (component 1) and the Fe protein (component 2). MoFe is an alpha2beta2 tetramer. This group contains the beta subunit of the MoFe protein. Each alphabeta pair of MoFe contains one P-cluster (at the alphabeta interface) and, one molecule of iron molybdenum cofactor (FeMoco) contained within the alpha subunit. The Fe protein contains a single [4Fe-4S] cluster. Electrons are transferred from the [4Fe-4S] cluster of the Fe protein to the P-cluster of the MoFe and in turn to FeMoCo, the site of substrate reduction.
Probab=30.03 E-value=85 Score=28.76 Aligned_cols=26 Identities=19% Similarity=0.370 Sum_probs=22.3
Q ss_pred CccEEEeCCCchhHHHHHHHcCCCeEeEe
Q 035856 56 KISCFLTDAFLTFSGEMARDMHIPWFPVF 84 (278)
Q Consensus 56 ~~d~vI~D~~~~~~~~vA~~lgIP~v~~~ 84 (278)
+||++|... ++..+|+++|||++.+.
T Consensus 377 ~pDliiG~s---~~~~~a~~~gip~v~~~ 402 (435)
T cd01974 377 PVDLLIGNT---YGKYIARDTDIPLVRFG 402 (435)
T ss_pred CCCEEEECc---cHHHHHHHhCCCEEEee
Confidence 899999976 57899999999998654
No 181
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=29.74 E-value=1.8e+02 Score=23.25 Aligned_cols=43 Identities=9% Similarity=0.130 Sum_probs=27.5
Q ss_pred HHHHHHHcCCCCccEEEeCCC-chhHHHHHHHcCCCeEeEeCCh
Q 035856 45 GLDAAVSKTGRKISCFLTDAF-LTFSGEMARDMHIPWFPVFVAM 87 (278)
Q Consensus 45 ~l~~l~~~~~~~~d~vI~D~~-~~~~~~vA~~lgIP~v~~~~~~ 87 (278)
.+++++++...+..++|=..+ -+++..+|+++|+|.|.+-++-
T Consensus 48 ~l~~~i~~~~~~~~~liGSSlGG~~A~~La~~~~~~avLiNPav 91 (187)
T PF05728_consen 48 QLEQLIEELKPENVVLIGSSLGGFYATYLAERYGLPAVLINPAV 91 (187)
T ss_pred HHHHHHHhCCCCCeEEEEEChHHHHHHHHHHHhCCCEEEEcCCC
Confidence 344445544222245565554 4678899999999998876543
No 182
>PLN02331 phosphoribosylglycinamide formyltransferase
Probab=29.54 E-value=1.2e+02 Score=24.78 Aligned_cols=43 Identities=21% Similarity=0.162 Sum_probs=30.0
Q ss_pred HHHHHHHHHHcC-CCCccEEEeCCCchhHHHHHHHcCCCeEeEe
Q 035856 42 FKKGLDAAVSKT-GRKISCFLTDAFLTFSGEMARDMHIPWFPVF 84 (278)
Q Consensus 42 l~~~l~~l~~~~-~~~~d~vI~D~~~~~~~~vA~~lgIP~v~~~ 84 (278)
++.+++.+.+.. +-.+-+||+|--...+...|++.|||+..+.
T Consensus 13 ~~al~~~~~~~~l~~~i~~visn~~~~~~~~~A~~~gIp~~~~~ 56 (207)
T PLN02331 13 FRAIHDACLDGRVNGDVVVVVTNKPGCGGAEYARENGIPVLVYP 56 (207)
T ss_pred HHHHHHHHHcCCCCeEEEEEEEeCCCChHHHHHHHhCCCEEEec
Confidence 445555543321 2367899999766778899999999998653
No 183
>TIGR00173 menD 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase. 2-oxoglutarate decarboxylase/SHCHC synthase (menD) is a thiamine pyrophosphate enzyme involved in menaquinone biosynthesis.
Probab=28.96 E-value=93 Score=28.42 Aligned_cols=27 Identities=30% Similarity=0.250 Sum_probs=22.3
Q ss_pred cccEEEeeCC------chhHHHHHHhCcceeec
Q 035856 213 SIGVFVIHSG------ANSVCESIANGVLMICR 239 (278)
Q Consensus 213 ~v~~fitHgG------~~s~~eal~~GvP~l~~ 239 (278)
+++++++|+| .+++.||.+.++|+|++
T Consensus 63 ~~gv~~~t~GpG~~N~l~gl~~A~~~~~Pvl~i 95 (432)
T TIGR00173 63 RPVAVVCTSGTAVANLLPAVIEASYSGVPLIVL 95 (432)
T ss_pred CCEEEEECCcchHhhhhHHHHHhcccCCcEEEE
Confidence 3458888887 45788999999999999
No 184
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=28.91 E-value=19 Score=32.43 Aligned_cols=66 Identities=20% Similarity=0.293 Sum_probs=44.6
Q ss_pred CCCeEEe-cCcchhhhccccccc-----------EEEeeCCchhHHHHHHhCcceeeccc-cCChhHHHHHHHHHhcceE
Q 035856 194 SGRGKIV-LQAPQTQVLGHFSIG-----------VFVIHSGANSVCESIANGVLMICRPF-YGDHRMNARMVEEVWGIGV 260 (278)
Q Consensus 194 ~~~~~v~-~w~pq~~iL~~~~v~-----------~fitHgG~~s~~eal~~GvP~l~~P~-~~DQ~~na~~~~~~~g~G~ 260 (278)
.+|.++. +--||+-+|...+-. +|=-|+--++.+|.+ +|-|+-+.|- +..|..+|+ ++.|-+|.
T Consensus 126 ~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~~~~~a~tl-cGSplYMAPEV~~~~~YdAK--ADLWSiG~ 202 (429)
T KOG0595|consen 126 HENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFLQPGSMAETL-CGSPLYMAPEVIMSQQYDAK--ADLWSIGT 202 (429)
T ss_pred HHCCeeeccCCcceEEeccCCCCCCCceEEecccchhhhCCchhHHHHh-hCCccccCHHHHHhccccch--hhHHHHHH
Confidence 3455555 556777777765211 233344445555555 6999999995 558999998 78888998
Q ss_pred Ee
Q 035856 261 KV 262 (278)
Q Consensus 261 ~l 262 (278)
.|
T Consensus 203 Il 204 (429)
T KOG0595|consen 203 IL 204 (429)
T ss_pred HH
Confidence 76
No 185
>TIGR02015 BchY chlorophyllide reductase subunit Y. This model represents the Y subunit of the three-subunit enzyme, (bacterio)chlorophyllide reductase. This enzyme is responsible for the reduction of the chlorin B-ring and is closely related to the protochlorophyllide reductase complex which reduces the D-ring. Both of these complexes in turn are homologous to nitrogenase.
Probab=28.82 E-value=88 Score=28.61 Aligned_cols=27 Identities=11% Similarity=-0.017 Sum_probs=22.6
Q ss_pred CCccEEEeCCCchhHHHHHHHcCCCeEeEe
Q 035856 55 RKISCFLTDAFLTFSGEMARDMHIPWFPVF 84 (278)
Q Consensus 55 ~~~d~vI~D~~~~~~~~vA~~lgIP~v~~~ 84 (278)
.+||++|... -+..+|+++|||.+.+.
T Consensus 354 ~~pDllig~s---~~~~~A~k~gIP~vr~g 380 (422)
T TIGR02015 354 FEPDLAIGTT---PLVQFAKEHGIPALYFT 380 (422)
T ss_pred CCCCEEEcCC---cchHHHHHcCCCEEEec
Confidence 3999999884 46678999999999864
No 186
>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing. This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate.
Probab=28.38 E-value=42 Score=29.89 Aligned_cols=42 Identities=14% Similarity=0.078 Sum_probs=31.6
Q ss_pred CCeEEecCc---chhhhcccccccEEEeeCCchhHHHHHHhCcceeec
Q 035856 195 GRGKIVLQA---PQTQVLGHFSIGVFVIHSGANSVCESIANGVLMICR 239 (278)
Q Consensus 195 ~~~~v~~w~---pq~~iL~~~~v~~fitHgG~~s~~eal~~GvP~l~~ 239 (278)
++..+.+-. ....++.+++ ++||-++. ++.||.+.|+|.|.+
T Consensus 262 ~~v~l~~~l~~~~~l~Ll~~a~--~vitdSSg-gi~EA~~lg~Pvv~l 306 (365)
T TIGR03568 262 PNFRLFKSLGQERYLSLLKNAD--AVIGNSSS-GIIEAPSFGVPTINI 306 (365)
T ss_pred CCEEEECCCChHHHHHHHHhCC--EEEEcChh-HHHhhhhcCCCEEee
Confidence 456666544 4456788999 99998753 349999999999976
No 187
>COG4671 Predicted glycosyl transferase [General function prediction only]
Probab=28.37 E-value=73 Score=28.38 Aligned_cols=13 Identities=38% Similarity=0.733 Sum_probs=10.3
Q ss_pred CccEEEeCCCchhH
Q 035856 56 KISCFLTDAFLTFS 69 (278)
Q Consensus 56 ~~d~vI~D~~~~~~ 69 (278)
+||++|+|.+ +.|
T Consensus 106 kPDi~IVd~~-P~G 118 (400)
T COG4671 106 KPDIFIVDKF-PFG 118 (400)
T ss_pred CCCEEEEecc-ccc
Confidence 9999999974 444
No 188
>PF07131 DUF1382: Protein of unknown function (DUF1382); InterPro: IPR009814 This entry is represented by Bacteriophage lambda, Xis. This entry overlaps with IPR009750, both representing lambda Xis. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This family consists of several hypothetical Escherichia coli and Bacteriophage lambda-like proteins of around 60 residues in length. The function of this family is unknown.
Probab=27.95 E-value=30 Score=21.89 Aligned_cols=9 Identities=22% Similarity=0.231 Sum_probs=7.9
Q ss_pred CCceEEecC
Q 035856 5 DNIRVYDVE 13 (278)
Q Consensus 5 ~~i~~~~i~ 13 (278)
.|||||++|
T Consensus 22 ~GIRFVpiP 30 (61)
T PF07131_consen 22 IGIRFVPIP 30 (61)
T ss_pred cCceeeccc
Confidence 389999998
No 189
>cd01143 YvrC Periplasmic binding protein YvrC. These proteins are predicted to function as initial receptors in ABC transport of metal ions in eubacteria and archaea. They belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains.
Probab=27.83 E-value=1.2e+02 Score=23.76 Aligned_cols=39 Identities=15% Similarity=0.056 Sum_probs=25.5
Q ss_pred HHHHHHHHcCCCCccEEEeCCCchh-HHHHHHHcCCCeEeEeC
Q 035856 44 KGLDAAVSKTGRKISCFLTDAFLTF-SGEMARDMHIPWFPVFV 85 (278)
Q Consensus 44 ~~l~~l~~~~~~~~d~vI~D~~~~~-~~~vA~~lgIP~v~~~~ 85 (278)
.-++++++. +||+||......- ...--++.|||.+.+..
T Consensus 51 ~n~E~l~~l---~PDlii~~~~~~~~~~~~l~~~gi~v~~~~~ 90 (195)
T cd01143 51 PNVEKIVAL---KPDLVIVSSSSLAELLEKLKDAGIPVVVLPA 90 (195)
T ss_pred CCHHHHhcc---CCCEEEEcCCcCHHHHHHHHHcCCcEEEeCC
Confidence 456676553 9999998653322 23445688999887754
No 190
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=26.90 E-value=1.4e+02 Score=26.67 Aligned_cols=61 Identities=16% Similarity=0.196 Sum_probs=39.0
Q ss_pred cEEEeeCCchhHHHHHHh------------C-----cceeeccccCChhHHHHHHHHHhcceEEe----cCCCcCHHHHH
Q 035856 215 GVFVIHSGANSVCESIAN------------G-----VLMICRPFYGDHRMNARMVEEVWGIGVKV----EGILLTKSGVL 273 (278)
Q Consensus 215 ~~fitHgG~~s~~eal~~------------G-----vP~l~~P~~~DQ~~na~~~~~~~g~G~~l----~~~~~~~~~l~ 273 (278)
++++|.||-.+.+-|+.+ | .|.+..+-.+ ++-+.+-+.- +|+|++. +.+.+..++|+
T Consensus 105 ~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~~~~~~~i~~s~~a-H~S~~Kaa~~-lGlg~~~I~~~~~~~md~~~L~ 182 (373)
T PF00282_consen 105 GGVFTSGGTEANLYALLAARERALPRSKAKGVEEIPKPVIYVSEQA-HYSIEKAARI-LGLGVRKIPTDEDGRMDIEALE 182 (373)
T ss_dssp EEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTTHCSSEEEEEETTS--THHHHHHHH-TTSEEEEE-BBTTSSB-HHHHH
T ss_pred ceeEeccchHHHHHHHHHHHHHHhhhhhhccccccccccccccccc-ccHHHHhcce-eeeEEEEecCCcchhhhHHHhh
Confidence 489999998888777543 3 3455554322 5666555444 5999774 24578889998
Q ss_pred hhhh
Q 035856 274 QSLD 277 (278)
Q Consensus 274 ~~i~ 277 (278)
++|+
T Consensus 183 ~~l~ 186 (373)
T PF00282_consen 183 KALE 186 (373)
T ss_dssp HHHH
T ss_pred hhhc
Confidence 8875
No 191
>PF06204 CBM_X: Putative carbohydrate binding domain ; InterPro: IPR009342 This domain is conserved in enzymes that have carbohydrates as substrate, and may be a carbohydrate-binding domain.; PDB: 3ACT_B 2CQT_A 3QFY_B 3QFZ_A 2CQS_A 3QG0_B 3AFJ_A 3ACS_A 1V7V_A 1V7X_A ....
Probab=26.44 E-value=33 Score=22.39 Aligned_cols=23 Identities=43% Similarity=0.566 Sum_probs=17.7
Q ss_pred CcchhhhcccccccEEEeeCCch
Q 035856 202 QAPQTQVLGHFSIGVFVIHSGAN 224 (278)
Q Consensus 202 w~pq~~iL~~~~v~~fitHgG~~ 224 (278)
-.|+..+|+..+-++.||+.|-|
T Consensus 24 p~P~~n~LsNg~y~~mvt~~G~G 46 (66)
T PF06204_consen 24 PAPWVNVLSNGSYGVMVTNSGSG 46 (66)
T ss_dssp SS--EEEE-SSSEEEEEETTSBE
T ss_pred CCCEEEEeeCCcEEEEEcCCCce
Confidence 56888999999999999999965
No 192
>PRK09219 xanthine phosphoribosyltransferase; Validated
Probab=26.41 E-value=1.8e+02 Score=23.31 Aligned_cols=31 Identities=16% Similarity=-0.049 Sum_probs=24.3
Q ss_pred CccEEEeCC--CchhHHHHHHHcCCCeEeEeCC
Q 035856 56 KISCFLTDA--FLTFSGEMARDMHIPWFPVFVA 86 (278)
Q Consensus 56 ~~d~vI~D~--~~~~~~~vA~~lgIP~v~~~~~ 86 (278)
++|+|+.=. -++.+..+|.++|+|.+...-.
T Consensus 50 ~~D~Ivg~e~~GiplA~~lA~~Lg~p~v~vRK~ 82 (189)
T PRK09219 50 GITKILTIEASGIAPAVMAALALGVPVVFAKKK 82 (189)
T ss_pred CCCEEEEEccccHHHHHHHHHHHCCCEEEEEEC
Confidence 789987632 3577889999999999987643
No 193
>PRK14478 nitrogenase molybdenum-cofactor biosynthesis protein NifE; Provisional
Probab=26.18 E-value=76 Score=29.51 Aligned_cols=24 Identities=25% Similarity=0.400 Sum_probs=21.2
Q ss_pred CccEEEeCCCchhHHHHHHHcCCCeEe
Q 035856 56 KISCFLTDAFLTFSGEMARDMHIPWFP 82 (278)
Q Consensus 56 ~~d~vI~D~~~~~~~~vA~~lgIP~v~ 82 (278)
+||++|.. .++..+|+++|||++.
T Consensus 393 ~pDliig~---s~~~~~a~k~giP~~~ 416 (475)
T PRK14478 393 KADIMLSG---GRSQFIALKAGMPWLD 416 (475)
T ss_pred CCCEEEec---CchhhhhhhcCCCEEE
Confidence 89999997 5777999999999984
No 194
>TIGR02919 accessory Sec system glycosyltransferase GtfB. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus.
Probab=25.97 E-value=57 Score=30.01 Aligned_cols=46 Identities=13% Similarity=0.128 Sum_probs=36.3
Q ss_pred CCeEEe-cCcc-h-hhhcccccccEEEeeCC--chhHHHHHHhCcceeecc
Q 035856 195 GRGKIV-LQAP-Q-TQVLGHFSIGVFVIHSG--ANSVCESIANGVLMICRP 240 (278)
Q Consensus 195 ~~~~v~-~w~p-q-~~iL~~~~v~~fitHgG--~~s~~eal~~GvP~l~~P 240 (278)
+|..+. ++.+ + .+++..+.+-+-++|+. .+++.||+.+|+|++..=
T Consensus 328 ~nvvly~~~~~~~l~~ly~~~dlyLdin~~e~~~~al~eA~~~G~pI~afd 378 (438)
T TIGR02919 328 DNVKLYPNITTQKIQELYQTCDIYLDINHGNEILNAVRRAFEYNLLILGFE 378 (438)
T ss_pred CCcEEECCcChHHHHHHHHhccEEEEccccccHHHHHHHHHHcCCcEEEEe
Confidence 555555 6677 3 57899999888888877 589999999999999753
No 195
>KOG1053 consensus Glutamate-gated NMDA-type ion channel receptor subunit GRIN2A and related subunits [Inorganic ion transport and metabolism; Amino acid transport and metabolism; Signal transduction mechanisms]
Probab=25.90 E-value=34 Score=34.07 Aligned_cols=73 Identities=21% Similarity=0.205 Sum_probs=50.4
Q ss_pred CceEEecCCCCCCCCCCCCCCcHHHHHHHHHHchHHHHHHHHHHHHcCCCCccEEEeCCCchhHHHHHHHcCCCeEeEe
Q 035856 6 NIRVYDVEDGVPMKYASTESNPLEAVELFVKATPENFKKGLDAAVSKTGRKISCFLTDAFLTFSGEMARDMHIPWFPVF 84 (278)
Q Consensus 6 ~i~~~~i~~glp~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~d~vI~D~~~~~~~~vA~~lgIP~v~~~ 84 (278)
.|||=++|.|--+..-+ .|-.++.+++.+.......+.++.+.. .+.|+.|+|.. .--..+.+.-|-..+...
T Consensus 688 pFRFGTVpngSTE~niR--~Nyp~MHeYM~kyNq~~v~dal~sLK~---gKLDAFIyDaA-VLnY~agkDegCKLvTIG 760 (1258)
T KOG1053|consen 688 PFRFGTVPNGSTERNIR--SNYPEMHEYMVKYNQPGVEDALESLKN---GKLDAFIYDAA-VLNYMAGKDEGCKLVTIG 760 (1258)
T ss_pred CcccccCCCCchhhhHH--hccHHHHHHHHHhccCchHHHHHHHhc---ccchhHHHHHH-HHHHhhccCCCceEEEec
Confidence 68898888777554322 356777777877777778888888754 49999999963 334455556666666554
No 196
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=25.81 E-value=1.3e+02 Score=26.03 Aligned_cols=29 Identities=17% Similarity=-0.072 Sum_probs=22.0
Q ss_pred CCccEEEeCCC--chhHHHHHHHcCCCeEeE
Q 035856 55 RKISCFLTDAF--LTFSGEMARDMHIPWFPV 83 (278)
Q Consensus 55 ~~~d~vI~D~~--~~~~~~vA~~lgIP~v~~ 83 (278)
.+||+|++..- ...+..+|+..|+|.+..
T Consensus 88 ~~pDvI~~~~~~~~~~~~~~a~~~~~p~v~~ 118 (350)
T cd03785 88 FKPDVVVGFGGYVSGPVGLAAKLLGIPLVIH 118 (350)
T ss_pred cCCCEEEECCCCcchHHHHHHHHhCCCEEEE
Confidence 38999998752 344567788999999864
No 197
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=25.77 E-value=1.3e+02 Score=26.50 Aligned_cols=38 Identities=18% Similarity=0.071 Sum_probs=22.8
Q ss_pred HHHHHHcCCCCccEEEe-CCCchhH--HHHHHHcCCCeEeEeC
Q 035856 46 LDAAVSKTGRKISCFLT-DAFLTFS--GEMARDMHIPWFPVFV 85 (278)
Q Consensus 46 l~~l~~~~~~~~d~vI~-D~~~~~~--~~vA~~lgIP~v~~~~ 85 (278)
+.+++++ .+||+|+. +.-..|. ...|++.|||.+.+..
T Consensus 77 ~~~~l~~--~kPdivi~~~~~~~~~~~a~~a~~~~ip~i~~~~ 117 (380)
T PRK00025 77 LKRRLLA--EPPDVFIGIDAPDFNLRLEKKLRKAGIPTIHYVS 117 (380)
T ss_pred HHHHHHH--cCCCEEEEeCCCCCCHHHHHHHHHCCCCEEEEeC
Confidence 3444444 38999876 3212233 3447788999887643
No 198
>COG0503 Apt Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins [Nucleotide transport and metabolism]
Probab=25.73 E-value=1.8e+02 Score=22.96 Aligned_cols=30 Identities=20% Similarity=0.332 Sum_probs=23.8
Q ss_pred CccEEEeCC--CchhHHHHHHHcCCCeEeEeC
Q 035856 56 KISCFLTDA--FLTFSGEMARDMHIPWFPVFV 85 (278)
Q Consensus 56 ~~d~vI~D~--~~~~~~~vA~~lgIP~v~~~~ 85 (278)
++|.|++=. -+..+..+|.++|+|.+..-=
T Consensus 53 ~id~Iv~iea~Gi~~a~~vA~~Lgvp~v~vRK 84 (179)
T COG0503 53 GIDKIVTIEARGIPLAAAVALELGVPFVPVRK 84 (179)
T ss_pred CCCEEEEEccccchhHHHHHHHhCCCEEEEEe
Confidence 799887643 367788999999999998743
No 199
>PRK10017 colanic acid biosynthesis protein; Provisional
Probab=25.58 E-value=1.1e+02 Score=27.94 Aligned_cols=64 Identities=16% Similarity=0.233 Sum_probs=43.2
Q ss_pred hhcccccccEEEeeCCchhHHHHHHhCcceeeccccCChhHHHHHHHHHhcceEE-ecCCCcCHHHHHhhhh
Q 035856 207 QVLGHFSIGVFVIHSGANSVCESIANGVLMICRPFYGDHRMNARMVEEVWGIGVK-VEGILLTKSGVLQSLD 277 (278)
Q Consensus 207 ~iL~~~~v~~fitHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~-l~~~~~~~~~l~~~i~ 277 (278)
.++++++ .+|.. =+=++.-|+..|||++.++. |+-.. ..+.+. |..-. ++...++.++|.+.++
T Consensus 323 ~iIs~~d--l~ig~-RlHa~I~a~~~gvP~i~i~Y--~~K~~-~~~~~l-g~~~~~~~~~~l~~~~Li~~v~ 387 (426)
T PRK10017 323 KILGACE--LTVGT-RLHSAIISMNFGTPAIAINY--EHKSA-GIMQQL-GLPEMAIDIRHLLDGSLQAMVA 387 (426)
T ss_pred HHHhhCC--EEEEe-cchHHHHHHHcCCCEEEeee--hHHHH-HHHHHc-CCccEEechhhCCHHHHHHHHH
Confidence 6788887 77752 23356778999999999997 44443 344665 87655 5656677777766553
No 200
>PF02603 Hpr_kinase_N: HPr Serine kinase N terminus; InterPro: IPR011126 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents the N-terminal region of Hpr Serine/threonine kinase PtsK. This kinase is the sensor in a multicomponent phosphorelay system in control of carbon catabolic repression in bacteria []. This kinase in unusual in that it recognises the tertiary structure of its target and is a member of a novel family unrelated to any previously described protein phosphorylating enzymes []. X-ray analysis of the full-length crystalline enzyme from Staphylococcus xylosus at a resolution of 1.95 A shows the enzyme to consist of two clearly separated domains that are assembled in a hexameric structure resembling a three-bladed propeller. The blades are formed by two N-terminal domains each, and the compact central hub assembles the C-terminal kinase domains []. ; GO: 0000155 two-component sensor activity, 0004672 protein kinase activity, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay), 0006109 regulation of carbohydrate metabolic process; PDB: 1KNX_B 1KO7_A.
Probab=25.56 E-value=72 Score=23.66 Aligned_cols=45 Identities=20% Similarity=0.155 Sum_probs=29.7
Q ss_pred hHHHHHHHHHHHHcCCCCccEEEeCCCc--hhHHHHHHHcCCCeEeEeC
Q 035856 39 PENFKKGLDAAVSKTGRKISCFLTDAFL--TFSGEMARDMHIPWFPVFV 85 (278)
Q Consensus 39 ~~~l~~~l~~l~~~~~~~~d~vI~D~~~--~~~~~vA~~lgIP~v~~~~ 85 (278)
.+..++.++++.+. ..|-+||++-+. .+...+|++.++|.....-
T Consensus 67 ~~~r~~~l~~l~~~--~~P~iIvt~~~~~p~~l~e~a~~~~ipll~t~~ 113 (127)
T PF02603_consen 67 EEERKERLEKLFSY--NPPCIIVTRGLEPPPELIELAEKYNIPLLRTPL 113 (127)
T ss_dssp HHHHCCHHHHHCTT--T-S-EEEETTT---HHHHHHHHHCT--EEEESS
T ss_pred HHHHHHHHHHHhCC--CCCEEEEECcCCCCHHHHHHHHHhCCcEEEcCC
Confidence 34456677887664 478888998875 4677999999999987654
No 201
>PF02776 TPP_enzyme_N: Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; InterPro: IPR012001 A number of enzymes require thiamine pyrophosphate (TPP) (vitamin B1) as a cofactor. It has been shown [] that some of these enzymes are structurally related. This represents the N-terminal TPP binding domain of TPP enzymes.; GO: 0030976 thiamine pyrophosphate binding; PDB: 3HWX_1 3FLM_B 3HWW_A 2JLC_A 2JLA_A 2VBG_A 2VBF_B 2Q29_A 2Q27_B 2Q28_B ....
Probab=25.42 E-value=85 Score=24.41 Aligned_cols=29 Identities=17% Similarity=0.307 Sum_probs=22.0
Q ss_pred cccEEEeeCC------chhHHHHHHhCcceeeccc
Q 035856 213 SIGVFVIHSG------ANSVCESIANGVLMICRPF 241 (278)
Q Consensus 213 ~v~~fitHgG------~~s~~eal~~GvP~l~~P~ 241 (278)
+.+++++|.| .+++.+|...++|+|++.-
T Consensus 64 ~~~v~~~~~GpG~~n~~~~l~~A~~~~~Pvl~i~g 98 (172)
T PF02776_consen 64 RPGVVIVTSGPGATNALTGLANAYADRIPVLVITG 98 (172)
T ss_dssp SEEEEEEETTHHHHTTHHHHHHHHHTT-EEEEEEE
T ss_pred cceEEEeecccchHHHHHHHhhcccceeeEEEEec
Confidence 3458888887 4678899999999998764
No 202
>PF04493 Endonuclease_5: Endonuclease V; InterPro: IPR007581 Endonuclease V is specific for single-stranded DNA, for duplex DNA that contains uracil, or that is damaged []. Matrix metalloproteinase-1 (MMP-1) is the major enzyme responsible for collagen 1 digestion. It is induced by exposure to sunlight, but is reduced with treatment of DNA repair enzyme endonuclease V []. This family consequently has potential medical importance []. This endonuclease also appears in bifunctional enzymes, such as the bifunctional methyltransferase/endonuclease in Thermoplasma acidophilum.; GO: 0004519 endonuclease activity, 0006281 DNA repair; PDB: 3GA2_A 2W36_A 3HD0_A 2W35_B 3GOC_B.
Probab=25.35 E-value=1.1e+02 Score=24.91 Aligned_cols=35 Identities=20% Similarity=0.214 Sum_probs=22.4
Q ss_pred HHcCCCCccEEEeCCCch-------hHHHHHHHcCCCeEeEe
Q 035856 50 VSKTGRKISCFLTDAFLT-------FSGEMARDMHIPWFPVF 84 (278)
Q Consensus 50 ~~~~~~~~d~vI~D~~~~-------~~~~vA~~lgIP~v~~~ 84 (278)
+++...++|+|++|-.-. .+..++-.+++|++-..
T Consensus 83 l~~l~~~~dvilvDG~G~~HpR~~GlA~HlGv~l~iPtIGVA 124 (206)
T PF04493_consen 83 LEKLKNKPDVILVDGHGILHPRRFGLASHLGVLLDIPTIGVA 124 (206)
T ss_dssp HHTSSS--SCEEEES-SSSSTTS--HHHHHHHHHTS-EEEEE
T ss_pred HHHhcccCCEEEEeCceeecCCCcChhheeeeccCCCEEEEe
Confidence 344456899999998533 46677788889999764
No 203
>TIGR02329 propionate_PrpR propionate catabolism operon regulatory protein PrpR. At least five distinct pathways exists for the catabolism of propionate by way of propionyl-CoA. Members of this family represent the transcriptional regulatory protein PrpR, whose gene is found in most cases divergently transcribed from an operon for the methylcitric acid cycle of propionate catabolism. 2-methylcitric acid, a catabolite by this pathway, is a coactivator of PrpR.
Probab=25.16 E-value=1.6e+02 Score=27.84 Aligned_cols=40 Identities=8% Similarity=0.165 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHHcCCCCccEEEeCCCchhHHHHHHHcCCCeEeEeC
Q 035856 40 ENFKKGLDAAVSKTGRKISCFLTDAFLTFSGEMARDMHIPWFPVFV 85 (278)
Q Consensus 40 ~~l~~~l~~l~~~~~~~~d~vI~D~~~~~~~~vA~~lgIP~v~~~~ 85 (278)
+..+..+.++.+. .+++||.|. -+..+|+++|++.+...+
T Consensus 132 ~e~~~~~~~l~~~---G~~~viG~~---~~~~~A~~~gl~~ili~s 171 (526)
T TIGR02329 132 EDARSCVNDLRAR---GIGAVVGAG---LITDLAEQAGLHGVFLYS 171 (526)
T ss_pred HHHHHHHHHHHHC---CCCEEECCh---HHHHHHHHcCCceEEEec
Confidence 4466667776543 899999997 346999999999998866
No 204
>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing. This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate.
Probab=24.91 E-value=1.7e+02 Score=26.03 Aligned_cols=38 Identities=16% Similarity=0.148 Sum_probs=25.7
Q ss_pred HHHHHHcCCCCccEEEeCC--C-chhHHHHHHHcCCCeEeEeC
Q 035856 46 LDAAVSKTGRKISCFLTDA--F-LTFSGEMARDMHIPWFPVFV 85 (278)
Q Consensus 46 l~~l~~~~~~~~d~vI~D~--~-~~~~~~vA~~lgIP~v~~~~ 85 (278)
+++++++. +||+|++-- . +..+..+|..+|||.+-+.-
T Consensus 85 ~~~~~~~~--~Pd~vlv~GD~~~~la~alaA~~~~IPv~Hvea 125 (365)
T TIGR03568 85 FSDAFERL--KPDLVVVLGDRFEMLAAAIAAALLNIPIAHIHG 125 (365)
T ss_pred HHHHHHHh--CCCEEEEeCCchHHHHHHHHHHHhCCcEEEEEC
Confidence 33444443 899988743 3 24678899999999995543
No 205
>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=24.81 E-value=3.6e+02 Score=24.06 Aligned_cols=29 Identities=17% Similarity=-0.027 Sum_probs=22.7
Q ss_pred CccEEEeCCC--chhHHHHHHHcCCCeEeEe
Q 035856 56 KISCFLTDAF--LTFSGEMARDMHIPWFPVF 84 (278)
Q Consensus 56 ~~d~vI~D~~--~~~~~~vA~~lgIP~v~~~ 84 (278)
+||+||.-.- ...+...|..+|||.+.--
T Consensus 91 kPd~vig~Ggyvs~P~~~Aa~~~~iPv~ihE 121 (357)
T COG0707 91 KPDVVIGTGGYVSGPVGIAAKLLGIPVIIHE 121 (357)
T ss_pred CCCEEEecCCccccHHHHHHHhCCCCEEEEe
Confidence 9999999543 3456688889999999754
No 206
>PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=24.56 E-value=1.3e+02 Score=20.94 Aligned_cols=36 Identities=17% Similarity=0.006 Sum_probs=25.1
Q ss_pred CCccEE--EeCCCc----hhHHHHHHHcCCCeEeEeCChhhh
Q 035856 55 RKISCF--LTDAFL----TFSGEMARDMHIPWFPVFVAMPYN 90 (278)
Q Consensus 55 ~~~d~v--I~D~~~----~~~~~vA~~lgIP~v~~~~~~~~~ 90 (278)
.++|+| ++|... .-....|++.|+|++..-..+...
T Consensus 47 ~~aD~VIv~t~~vsH~~~~~vk~~akk~~ip~~~~~~~~~~~ 88 (97)
T PF10087_consen 47 KKADLVIVFTDYVSHNAMWKVKKAAKKYGIPIIYSRSRGVSS 88 (97)
T ss_pred CCCCEEEEEeCCcChHHHHHHHHHHHHcCCcEEEECCCCHHH
Confidence 367877 556543 345688999999999887555544
No 207
>cd01018 ZntC Metal binding protein ZntC. These proteins are predicted to function as initial receptors in ABC transport of metal ions. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a long alpha helix and bind their specific ligands in the cleft between these domains. In addition, many of these proteins possess a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=24.56 E-value=2.2e+02 Score=23.98 Aligned_cols=43 Identities=12% Similarity=0.190 Sum_probs=30.4
Q ss_pred HHHHHHHHHHHcCCCCccEEEeCCCch--hHHHHHHHcCCCeEeEeCC
Q 035856 41 NFKKGLDAAVSKTGRKISCFLTDAFLT--FSGEMARDMHIPWFPVFVA 86 (278)
Q Consensus 41 ~l~~~l~~l~~~~~~~~d~vI~D~~~~--~~~~vA~~lgIP~v~~~~~ 86 (278)
.+..+++.+.+ .++.||+++.... .+..+|++.|++.+.+.+.
T Consensus 205 ~l~~l~~~ik~---~~v~~if~e~~~~~~~~~~la~~~g~~v~~ld~~ 249 (266)
T cd01018 205 DLKRLIDLAKE---KGVRVVFVQPQFSTKSAEAIAREIGAKVVTIDPL 249 (266)
T ss_pred HHHHHHHHHHH---cCCCEEEEcCCCCcHHHHHHHHHcCCeEEEeCCc
Confidence 34454555433 3899999998654 4568999999998877544
No 208
>KOG0081 consensus GTPase Rab27, small G protein superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=24.36 E-value=2.6e+02 Score=21.92 Aligned_cols=45 Identities=11% Similarity=0.153 Sum_probs=30.4
Q ss_pred HHHHHHHHHHcC-CCCccEEEeCCCch----------hHHHHHHHcCCCeEeEeCC
Q 035856 42 FKKGLDAAVSKT-GRKISCFLTDAFLT----------FSGEMARDMHIPWFPVFVA 86 (278)
Q Consensus 42 l~~~l~~l~~~~-~~~~d~vI~D~~~~----------~~~~vA~~lgIP~v~~~~~ 86 (278)
.++.+.++-... .+.||+|++-.-.- -+..+|+++|||.+-.+..
T Consensus 109 vrnWlSQL~~hAYcE~PDivlcGNK~DL~~~R~Vs~~qa~~La~kyglPYfETSA~ 164 (219)
T KOG0081|consen 109 VRNWLSQLQTHAYCENPDIVLCGNKADLEDQRVVSEDQAAALADKYGLPYFETSAC 164 (219)
T ss_pred HHHHHHHHHHhhccCCCCEEEEcCccchhhhhhhhHHHHHHHHHHhCCCeeeeccc
Confidence 455566654322 57999999865332 3568899999999876543
No 209
>PRK05299 rpsB 30S ribosomal protein S2; Provisional
Probab=24.22 E-value=90 Score=26.46 Aligned_cols=36 Identities=14% Similarity=0.066 Sum_probs=26.7
Q ss_pred CCccEE-EeCCCc-hhHHHHHHHcCCCeEeEeCChhhh
Q 035856 55 RKISCF-LTDAFL-TFSGEMARDMHIPWFPVFVAMPYN 90 (278)
Q Consensus 55 ~~~d~v-I~D~~~-~~~~~vA~~lgIP~v~~~~~~~~~ 90 (278)
..||+| |.|+-- ..+..-|.++|||.+.+.-+...+
T Consensus 156 ~~Pd~iii~d~~~~~~ai~Ea~kl~IPiIaivDTn~dp 193 (258)
T PRK05299 156 GLPDALFVVDPNKEHIAVKEARKLGIPVVAIVDTNCDP 193 (258)
T ss_pred cCCCEEEEeCCCccHHHHHHHHHhCCCEEEEeeCCCCC
Confidence 468877 556643 467788999999999998765543
No 210
>PF01372 Melittin: Melittin; InterPro: IPR002116 Allergies are hypersensitivity reactions of the immune system to specific substances called allergens (such as pollen, stings, drugs, or food) that, in most people, result in no symptoms. A nomenclature system has been established for antigens (allergens) that cause IgE-mediated atopic allergies in humans [WHO/IUIS Allergen Nomenclature Subcommittee King T.P., Hoffmann D., Loewenstein H., Marsh D.G., Platts-Mills T.A.E., Thomas W. Bull. World Health Organ. 72:797-806(1994)]. This nomenclature system is defined by a designation that is composed of the first three letters of the genus; a space; the first letter of the species name; a space and an Arabic number. In the event that two species names have identical designations, they are discriminated from one another by adding one or more letters (as necessary) to each species designation. The allergens in this family include allergens with the following designations: Api m 3. Melittin is the principal protein component of the venom of the honeybee, Apis mellifera. It inhibits protein kinase C, Ca2+/calmodulin-dependent protein kinase II, myosin light chain kinase and Na+/K+-ATPase (synaptosomal membrane) and is a cell membrane lytic factor. Melittin is a small peptide with no disulphide bridge; the N-terminal part of the molecule is predominantly hydrophobic and the C-terminal part is hydrophilic and strongly basic. The molecular mechanisms underlying the various effects of melittin on membranes have not been completely defined and much of the evidence indicates that different molecular mechanisms may underlie different actions of the peptide []. Extensive work with melittin has shown that the venom has multiple effects, probably, as a result of its interaction with negatively changed phospholipids. It inhibits well known transport pumps such as the Na+-K+-ATPase and the H+-K+-ATPase. Melittin increases the permeability of cell membranes to ions, particularly Na+ and indirectly Ca2+, because of the Na+-Ca2+-exchange. This effect results in marked morphological and functional changes, particularly in excitable tissues such as cardiac myocytes. In some other tissues, e.g., cornea, not only Na+ but Cl- permeability is also increased by melittin. Similar effects to melittin on H+-K+-ATPase have been found with the synthetic amphipathic polypeptide Trp-3 []. The study of melittin in model membranes has been useful for the development of methodology for determination of membrane protein structures. A molecular dynamics simulation of melittin in a hydrated dipalmitoylphosphatidylcholine (DPPC) bilayer was carried out. The effect of melittin on the surrounding membrane was localised to its immediate vicinity, and its asymmetry with respect to the two layers may be a result of the fact that it is not fully transmembranal. Melittin's hydrophilic C terminus anchors it at the extracellular interface, leaving the N terminus "loose" in the lower layer of the membrane [].; GO: 0004860 protein kinase inhibitor activity, 0005576 extracellular region; PDB: 3QRX_B 2MLT_A 1BH1_A.
Probab=24.05 E-value=15 Score=18.66 Aligned_cols=17 Identities=18% Similarity=0.432 Sum_probs=12.6
Q ss_pred CchhHHHHHHhCcceee
Q 035856 222 GANSVCESIANGVLMIC 238 (278)
Q Consensus 222 G~~s~~eal~~GvP~l~ 238 (278)
|.|+.+-.|+.|.|.++
T Consensus 1 gIGa~Lkvla~~LP~lI 17 (26)
T PF01372_consen 1 GIGAILKVLATGLPTLI 17 (26)
T ss_dssp -HHHHHHHHHTHHHHHH
T ss_pred ChhHHHHHHHhcChHHH
Confidence 56888888888888653
No 211
>cd01425 RPS2 Ribosomal protein S2 (RPS2), involved in formation of the translation initiation complex, where it might contact the messenger RNA and several components of the ribosome. It has been shown that in Escherichia coli RPS2 is essential for the binding of ribosomal protein S1 to the 30s ribosomal subunit. In humans, most likely in all vertebrates, and perhaps in all metazoans, the protein also functions as the 67 kDa laminin receptor (LAMR1 or 67LR), which is formed from a 37 kDa precursor, and is overexpressed in many tumors. 67LR is a cell surface receptor which interacts with a variety of ligands, laminin-1 and others. It is assumed that the ligand interactions are mediated via the conserved C-terminus, which becomes extracellular as the protein undergoes conformational changes which are not well understood. Specifically, a conserved palindromic motif, LMWWML, may participate in the interactions. 67LR plays essential roles in the adhesion of cells to the basement membrane an
Probab=23.78 E-value=95 Score=24.92 Aligned_cols=35 Identities=14% Similarity=-0.008 Sum_probs=25.9
Q ss_pred CCccEEE-eCCC-chhHHHHHHHcCCCeEeEeCChhh
Q 035856 55 RKISCFL-TDAF-LTFSGEMARDMHIPWFPVFVAMPY 89 (278)
Q Consensus 55 ~~~d~vI-~D~~-~~~~~~vA~~lgIP~v~~~~~~~~ 89 (278)
..||+|| .|.. -..+..-|.++|||.+.+.-+...
T Consensus 126 ~~Pdlviv~~~~~~~~ai~Ea~~l~IP~I~i~Dtn~~ 162 (193)
T cd01425 126 RLPDLVIVLDPRKEHQAIREASKLGIPVIAIVDTNCD 162 (193)
T ss_pred cCCCEEEEeCCccchHHHHHHHHcCCCEEEEecCCCC
Confidence 4799775 4543 346778899999999999876643
No 212
>cd01973 Nitrogenase_VFe_beta_like Nitrogenase_VFe_beta -like: Nitrogenase VFe protein, beta subunit like. This group contains proteins similar to the beta subunits of the VFe protein of the vanadium-dependent (V-) nitrogenase. Nitrogenase catalyzes the ATP-dependent reduction of dinitrogen (N2) to ammonia. In addition to V-nitrogenase there is a molybdenum (Mo)-dependent nitrogenase and an iron only (Fe-) nitrogenase. The Mo-nitrogenase is the most widespread and best characterized of these systems. These systems consist of component 1 (VFe protein, FeFe protein or, MoFe protein respectively) and, component 2 (Fe protein). MoFe is an alpha2beta2 tetramer, V-and Fe- nitrogenases are alpha2beta2delta2 hexamers. The alpha and beta subunits of VFe and FeFe are similar to the alpha and beta subunits of MoFe. For MoFe each alphabeta pair contains one P-cluster (at the alphabeta interface) and, one molecule of iron molybdenum cofactor (FeMoco) contained within the alpha subunit. The Fe p
Probab=23.76 E-value=1.3e+02 Score=27.89 Aligned_cols=25 Identities=24% Similarity=0.284 Sum_probs=21.9
Q ss_pred CccEEEeCCCchhHHHHHHHcCCCeEeE
Q 035856 56 KISCFLTDAFLTFSGEMARDMHIPWFPV 83 (278)
Q Consensus 56 ~~d~vI~D~~~~~~~~vA~~lgIP~v~~ 83 (278)
+||++|... ++..+|+++|||.+..
T Consensus 381 ~~dliig~s---~~~~~A~~~gip~~~~ 405 (454)
T cd01973 381 ELDLILGHS---KGRYIAIDNNIPMVRV 405 (454)
T ss_pred CCCEEEECC---ccHHHHHHcCCCEEEe
Confidence 699999875 6789999999999875
No 213
>TIGR00679 hpr-ser Hpr(Ser) kinase/phosphatase. The hprK gene of Enterococcus faecalis encodes a bifunctional enzyme: the HPr kinase/phosphatase
Probab=23.32 E-value=3.1e+02 Score=23.93 Aligned_cols=50 Identities=10% Similarity=0.120 Sum_probs=36.3
Q ss_pred HHchHHHHHHHHHHHHcCCCCccEEEeCCCch--hHHHHHHHcCCCeEeEeCCh
Q 035856 36 KATPENFKKGLDAAVSKTGRKISCFLTDAFLT--FSGEMARDMHIPWFPVFVAM 87 (278)
Q Consensus 36 ~~~~~~l~~~l~~l~~~~~~~~d~vI~D~~~~--~~~~vA~~lgIP~v~~~~~~ 87 (278)
+...+.-+..++++.+. +.|-+||++-+.. ....+|++.+||.+...-.+
T Consensus 65 ~l~~e~~~~~~~~~~~~--~~P~iIvt~~~~~p~~l~~~a~~~~ip~l~t~~~~ 116 (304)
T TIGR00679 65 QLPEEEQKQIIHNLLTL--NPPAIILSKSFTDPTVLLQVNETYQVPILKTDLFS 116 (304)
T ss_pred hCCHHHHHHHHHHHhCC--CCCEEEEECcCCCCHHHHHHHHHhCCcEEEeCCcH
Confidence 33445566778888765 3788888877643 56799999999999876544
No 214
>PF13407 Peripla_BP_4: Periplasmic binding protein domain; PDB: 3BRS_B 3GBP_A 3GA5_A 1GCG_A 1GCA_A 3H75_A 3D02_A 3L49_B 3EJW_B 3T95_A ....
Probab=23.32 E-value=2e+02 Score=23.51 Aligned_cols=41 Identities=17% Similarity=0.121 Sum_probs=28.8
Q ss_pred HHHHHHHHHcCCCCccEEEeCCCch----hHHHHHHHcCCCeEeEeCC
Q 035856 43 KKGLDAAVSKTGRKISCFLTDAFLT----FSGEMARDMHIPWFPVFVA 86 (278)
Q Consensus 43 ~~~l~~l~~~~~~~~d~vI~D~~~~----~~~~vA~~lgIP~v~~~~~ 86 (278)
...++++++. ++|.||..+... -...-+++-|||.+.+...
T Consensus 45 ~~~i~~~i~~---~~d~Iiv~~~~~~~~~~~l~~~~~~gIpvv~~d~~ 89 (257)
T PF13407_consen 45 IEQIEQAISQ---GVDGIIVSPVDPDSLAPFLEKAKAAGIPVVTVDSD 89 (257)
T ss_dssp HHHHHHHHHT---TESEEEEESSSTTTTHHHHHHHHHTTSEEEEESST
T ss_pred HHHHHHHHHh---cCCEEEecCCCHHHHHHHHHHHhhcCceEEEEecc
Confidence 3556666554 899999776543 3456677889999998766
No 215
>TIGR01862 N2-ase-Ialpha nitrogenase component I, alpha chain. This model represents the alpha chain of all three varieties (Mo-Fe, V-Fe, and Fe-Fe) of component I of nitrogenase.
Probab=23.26 E-value=87 Score=28.79 Aligned_cols=25 Identities=12% Similarity=0.216 Sum_probs=21.7
Q ss_pred CccEEEeCCCchhHHHHHHHcCCCeEeE
Q 035856 56 KISCFLTDAFLTFSGEMARDMHIPWFPV 83 (278)
Q Consensus 56 ~~d~vI~D~~~~~~~~vA~~lgIP~v~~ 83 (278)
+||++|... ++..+|+++|||.+..
T Consensus 387 ~pdllig~s---~~~~~A~~lgip~~~~ 411 (443)
T TIGR01862 387 KPDIIFSGI---KEKFVAQKLGVPYRQM 411 (443)
T ss_pred CCCEEEEcC---cchhhhhhcCCCeEec
Confidence 899999865 6688999999999875
No 216
>PF12965 DUF3854: Domain of unknown function (DUF3854); InterPro: IPR024385 This is a family of uncharacterised proteins, found by clustering human gut metagenomic sequences [].
Probab=23.18 E-value=84 Score=23.51 Aligned_cols=34 Identities=18% Similarity=0.241 Sum_probs=27.2
Q ss_pred hhcccccccEEEeeCCchhHHHHHHhCcceeeccc
Q 035856 207 QVLGHFSIGVFVIHSGANSVCESIANGVLMICRPF 241 (278)
Q Consensus 207 ~iL~~~~v~~fitHgG~~s~~eal~~GvP~l~~P~ 241 (278)
.++.|+++..+||-|..=. ..++.+|.+.|.+|=
T Consensus 4 ~v~~~p~~pi~ItEG~kKA-~al~s~G~~aIalpG 37 (130)
T PF12965_consen 4 WVLDDPNIPIWITEGAKKA-GALLSQGYPAIALPG 37 (130)
T ss_pred ceecCCCccEEEEechHHH-HHHHcCCceEEEeCc
Confidence 4678899999999998654 445678999999993
No 217
>TIGR01284 alt_nitrog_alph nitrogenase alpha chain. This model represents the alpha chains of various forms of the nitrogen-fixing enzyme nitrogenase: vanadium-iron, iron-iron, and molybdenum-iron. Most examples of NifD, the molybdenum-iron type nitrogenase alpha chain, are excluded from this model and described instead by equivalog model TIGR01282. It appears by phylogenetic and UPGMA trees that this model represents a distinct clade of NifD homologs, in which arose several molybdenum-independent forms.
Probab=23.03 E-value=75 Score=29.38 Aligned_cols=33 Identities=27% Similarity=0.529 Sum_probs=24.9
Q ss_pred HHHHHHcCCCCccEEEeCCCchhHHHHHHHcCCCeEeE
Q 035856 46 LDAAVSKTGRKISCFLTDAFLTFSGEMARDMHIPWFPV 83 (278)
Q Consensus 46 l~~l~~~~~~~~d~vI~D~~~~~~~~vA~~lgIP~v~~ 83 (278)
+++++++. +||++|... ++..+|+++|||.+..
T Consensus 387 ~~~~i~~~--~pDllig~~---~~~~~a~k~gip~~~~ 419 (457)
T TIGR01284 387 LEEIIEKY--KPDIILTGI---REGELAKKLGVPYINI 419 (457)
T ss_pred HHHHHHhc--CCCEEEecC---CcchhhhhcCCCEEEc
Confidence 33444443 899999875 5678999999999875
No 218
>TIGR02931 anfK_nitrog Fe-only nitrogenase, beta subunit. Nitrogenase is the enzyme of biological nitrogen fixation. The most wide-spread and most efficient nitrogenase contains a molybdenum cofactor. This protein family, AnfK, represents the beta subunit of the iron-only alternative nitrogenase. It is homologous to NifK and VnfK, of the molybdenum-containing and the vanadium (V)-containing types, respectively.
Probab=22.76 E-value=1.5e+02 Score=27.55 Aligned_cols=26 Identities=19% Similarity=0.239 Sum_probs=22.4
Q ss_pred CCccEEEeCCCchhHHHHHHHcCCCeEeE
Q 035856 55 RKISCFLTDAFLTFSGEMARDMHIPWFPV 83 (278)
Q Consensus 55 ~~~d~vI~D~~~~~~~~vA~~lgIP~v~~ 83 (278)
.+||++|... ++..+|+++|||.+..
T Consensus 387 ~~~Dliig~s---~~~~~a~k~gip~~~~ 412 (461)
T TIGR02931 387 LELDLILGHS---KGRFISIDYNIPMVRV 412 (461)
T ss_pred CCCCEEEECc---chHHHHHHcCCCEEEe
Confidence 3799999976 6789999999999875
No 219
>PRK06321 replicative DNA helicase; Provisional
Probab=22.72 E-value=1.9e+02 Score=26.93 Aligned_cols=42 Identities=14% Similarity=0.236 Sum_probs=27.5
Q ss_pred HHHHHHHHHHcCCCCccEEEeCCCchh----------------------HHHHHHHcCCCeEeEeC
Q 035856 42 FKKGLDAAVSKTGRKISCFLTDAFLTF----------------------SGEMARDMHIPWFPVFV 85 (278)
Q Consensus 42 l~~~l~~l~~~~~~~~d~vI~D~~~~~----------------------~~~vA~~lgIP~v~~~~ 85 (278)
++..++++.++ .+.|+||.|.+... -..+|++++||.+..+-
T Consensus 324 i~~~~r~~~~~--~~~~lvvIDyLql~~~~~~~~~~~~r~~ei~~Isr~LK~lAkel~vpVi~lsQ 387 (472)
T PRK06321 324 LRARARRMKES--YDIQFLIIDYLQLLSGSGNLRNSESRQTEISEISRMLKNLARELNIPILCLSQ 387 (472)
T ss_pred HHHHHHHHHHh--cCCCEEEEcchHHcCCCCccCCcchHHHHHHHHHHHHHHHHHHhCCcEEEEee
Confidence 44445555443 36999999986432 12467789999998753
No 220
>PRK02277 orotate phosphoribosyltransferase-like protein; Provisional
Probab=22.53 E-value=2.6e+02 Score=22.51 Aligned_cols=31 Identities=6% Similarity=-0.010 Sum_probs=24.0
Q ss_pred CCCccEEEeCC--CchhHHHHHHHcCCCeEeEe
Q 035856 54 GRKISCFLTDA--FLTFSGEMARDMHIPWFPVF 84 (278)
Q Consensus 54 ~~~~d~vI~D~--~~~~~~~vA~~lgIP~v~~~ 84 (278)
+..+|+|+.=. -++++..+|+.+|+|.+.+.
T Consensus 83 ~~~~D~Ivgi~~gG~~~A~~lA~~L~~~~~~~~ 115 (200)
T PRK02277 83 DEEVDVVVGIAKSGVPLATLVADELGKDLAIYH 115 (200)
T ss_pred CCCCCEEEeeccCCHHHHHHHHHHhCCCcEEEe
Confidence 35899997633 35788899999999987764
No 221
>PRK12404 stage V sporulation protein AD; Provisional
Probab=22.49 E-value=1.9e+02 Score=25.51 Aligned_cols=46 Identities=26% Similarity=0.434 Sum_probs=29.7
Q ss_pred HHHHHHHHHHHHcCC---CCccEEEe-CCC--chhHHHHHHHcCCCeEeEeC
Q 035856 40 ENFKKGLDAAVSKTG---RKISCFLT-DAF--LTFSGEMARDMHIPWFPVFV 85 (278)
Q Consensus 40 ~~l~~~l~~l~~~~~---~~~d~vI~-D~~--~~~~~~vA~~lgIP~v~~~~ 85 (278)
+.+.+.+++.+++.+ ..+|.++. |.. ...+..+++++|||.+-...
T Consensus 56 ~L~~EA~~~AL~kAGI~~~DID~i~vGdL~nQ~ipssfvar~LGIP~~gV~g 107 (334)
T PRK12404 56 KLLEEACSRAIEKAKLRKEDIQFFLAGDLMNQITPTSFAARTLGIPYLGLFG 107 (334)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCcCcHHHHHHHhCCCccceee
Confidence 445555666665542 35888887 443 34455999999999865544
No 222
>COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]
Probab=22.40 E-value=2.2e+02 Score=25.67 Aligned_cols=50 Identities=12% Similarity=0.025 Sum_probs=40.8
Q ss_pred CCeEEe---cCcchhhhcccccccEEEeeCCchhHHHHHHhCcceeeccccCChhH
Q 035856 195 GRGKIV---LQAPQTQVLGHFSIGVFVIHSGANSVCESIANGVLMICRPFYGDHRM 247 (278)
Q Consensus 195 ~~~~v~---~w~pq~~iL~~~~v~~fitHgG~~s~~eal~~GvP~l~~P~~~DQ~~ 247 (278)
+|.++. ++.+...++.++. +.+|-.| |-.=||-..|+|.+++=...+++.
T Consensus 262 ~~v~li~pl~~~~f~~L~~~a~--~iltDSG-giqEEAp~lg~Pvl~lR~~TERPE 314 (383)
T COG0381 262 ERVKLIDPLGYLDFHNLMKNAF--LILTDSG-GIQEEAPSLGKPVLVLRDTTERPE 314 (383)
T ss_pred CcEEEeCCcchHHHHHHHHhce--EEEecCC-chhhhHHhcCCcEEeeccCCCCcc
Confidence 456554 5778888999998 9999887 557799999999999987777775
No 223
>COG1435 Tdk Thymidine kinase [Nucleotide transport and metabolism]
Probab=22.38 E-value=1e+02 Score=24.97 Aligned_cols=30 Identities=27% Similarity=0.378 Sum_probs=23.3
Q ss_pred CccEEEeCCCchh-------HHHHHHHcCCCeEeEeC
Q 035856 56 KISCFLTDAFLTF-------SGEMARDMHIPWFPVFV 85 (278)
Q Consensus 56 ~~d~vI~D~~~~~-------~~~vA~~lgIP~v~~~~ 85 (278)
+.|||+.|-..++ ...+|.++|||++.+..
T Consensus 82 ~~~~v~IDEaQF~~~~~v~~l~~lad~lgi~Vi~~GL 118 (201)
T COG1435 82 PVDCVLIDEAQFFDEELVYVLNELADRLGIPVICYGL 118 (201)
T ss_pred CcCEEEEehhHhCCHHHHHHHHHHHhhcCCEEEEecc
Confidence 3789999986554 34789999999998743
No 224
>TIGR01011 rpsB_bact ribosomal protein S2, bacterial type. TIGR01012 describes the archaeal and cytosolic forms.
Probab=21.98 E-value=1.1e+02 Score=25.27 Aligned_cols=36 Identities=14% Similarity=0.092 Sum_probs=26.7
Q ss_pred CCccEE-EeCCC-chhHHHHHHHcCCCeEeEeCChhhh
Q 035856 55 RKISCF-LTDAF-LTFSGEMARDMHIPWFPVFVAMPYN 90 (278)
Q Consensus 55 ~~~d~v-I~D~~-~~~~~~vA~~lgIP~v~~~~~~~~~ 90 (278)
..||+| |.|+- -..+..-|.++|||.+.+.-+...+
T Consensus 154 ~~Pd~vii~d~~~~~~ai~Ea~~l~IP~I~ivDTn~~p 191 (225)
T TIGR01011 154 KLPDLLFVIDPVKEKIAVAEARKLGIPVVAIVDTNCDP 191 (225)
T ss_pred cCCCEEEEeCCCccHHHHHHHHHcCCCEEEEeeCCCCC
Confidence 468877 55654 3567788999999999997666544
No 225
>PRK00654 glgA glycogen synthase; Provisional
Probab=21.85 E-value=50 Score=30.43 Aligned_cols=65 Identities=15% Similarity=0.245 Sum_probs=36.6
Q ss_pred hhcccccccEEEe---eCCc-hhHHHHHHhCcceeeccccC--ChhHHHHHHHHHhcceEEecCCCcCHHHHHhhh
Q 035856 207 QVLGHFSIGVFVI---HSGA-NSVCESIANGVLMICRPFYG--DHRMNARMVEEVWGIGVKVEGILLTKSGVLQSL 276 (278)
Q Consensus 207 ~iL~~~~v~~fit---HgG~-~s~~eal~~GvP~l~~P~~~--DQ~~na~~~~~~~g~G~~l~~~~~~~~~l~~~i 276 (278)
.+++.++ +|+. +-|+ .+.+||+++|+|.|+.-..+ |.-.+...-.+. +.|..++.+ +.+++.+++
T Consensus 352 ~~~~~aD--v~v~PS~~E~~gl~~lEAma~G~p~V~~~~gG~~e~v~~~~~~~~~-~~G~lv~~~--d~~~la~~i 422 (466)
T PRK00654 352 RIYAGAD--MFLMPSRFEPCGLTQLYALRYGTLPIVRRTGGLADTVIDYNPEDGE-ATGFVFDDF--NAEDLLRAL 422 (466)
T ss_pred HHHhhCC--EEEeCCCCCCchHHHHHHHHCCCCEEEeCCCCccceeecCCCCCCC-CceEEeCCC--CHHHHHHHH
Confidence 5678888 5654 2234 47899999999998865422 211111000122 567776653 455555554
No 226
>COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism]
Probab=21.78 E-value=2.3e+02 Score=23.94 Aligned_cols=40 Identities=18% Similarity=0.282 Sum_probs=26.5
Q ss_pred HHHHHHHHcCCCCccEEEeCCCch------hHHHHHHHcCCCeEeEeC
Q 035856 44 KGLDAAVSKTGRKISCFLTDAFLT------FSGEMARDMHIPWFPVFV 85 (278)
Q Consensus 44 ~~l~~l~~~~~~~~d~vI~D~~~~------~~~~vA~~lgIP~v~~~~ 85 (278)
+-+.+++++. ++|+||=-.+-+ -+..+|++.|||++.|--
T Consensus 56 e~l~~~l~e~--~i~llIDATHPyAa~iS~Na~~aake~gipy~r~eR 101 (257)
T COG2099 56 EGLAAFLREE--GIDLLIDATHPYAARISQNAARAAKETGIPYLRLER 101 (257)
T ss_pred HHHHHHHHHc--CCCEEEECCChHHHHHHHHHHHHHHHhCCcEEEEEC
Confidence 4455566553 888776444322 244889999999999853
No 227
>TIGR00347 bioD dethiobiotin synthase. Dethiobiotin synthase is involved in biotin biosynthesis and catalyses the reaction (CO2 + 7,8-diaminononanoate + ATP = dethiobiotin + phosphate + ADP). The enzyme binds ATP (see motif in first 12 residues of the SEED alignment) and requires magnesium as a co-factor.
Probab=21.68 E-value=1.5e+02 Score=22.57 Aligned_cols=33 Identities=12% Similarity=0.167 Sum_probs=24.9
Q ss_pred CCccEEEeCCCc---------hhHHHHHHHcCCCeEeEeCCh
Q 035856 55 RKISCFLTDAFL---------TFSGEMARDMHIPWFPVFVAM 87 (278)
Q Consensus 55 ~~~d~vI~D~~~---------~~~~~vA~~lgIP~v~~~~~~ 87 (278)
+..|+||.|... ....++++.++.|.+......
T Consensus 98 ~~~D~viid~~g~~~~~~~~~~~~~dl~~~~~~~vilV~~~~ 139 (166)
T TIGR00347 98 QKYDFVLVEGAGGLCVPITEEYTTADLIKLLQLPVILVVRVK 139 (166)
T ss_pred hcCCEEEEEcCCccccCCCCCCcHHHHHHHhCCCEEEEECCC
Confidence 479999998841 246679999999998876443
No 228
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase. RL J Bacteriol 1993 Mar;175(6):1841-3
Probab=21.66 E-value=1.7e+02 Score=25.25 Aligned_cols=36 Identities=19% Similarity=0.093 Sum_probs=24.4
Q ss_pred HHHHHHcCCCCccEEEeCCCc--hhHHHHHHHcCCCeEeE
Q 035856 46 LDAAVSKTGRKISCFLTDAFL--TFSGEMARDMHIPWFPV 83 (278)
Q Consensus 46 l~~l~~~~~~~~d~vI~D~~~--~~~~~vA~~lgIP~v~~ 83 (278)
+.+++++ .+||+|++.... .++..+++..++|.+.+
T Consensus 82 l~~~i~~--~~pDvVi~~~~~~~~~~~~~~~~~~~p~v~~ 119 (348)
T TIGR01133 82 ARRILKK--FKPDAVIGFGGYVSGPAGLAAKLLGIPLFHH 119 (348)
T ss_pred HHHHHHh--cCCCEEEEcCCcccHHHHHHHHHcCCCEEEE
Confidence 3444444 399999997533 34555788889999853
No 229
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=21.59 E-value=2.3e+02 Score=23.97 Aligned_cols=38 Identities=11% Similarity=0.216 Sum_probs=25.6
Q ss_pred HHHHHHcCCCCccEEEeCCCchh------HHHHHHHcCCCeEeEeC
Q 035856 46 LDAAVSKTGRKISCFLTDAFLTF------SGEMARDMHIPWFPVFV 85 (278)
Q Consensus 46 l~~l~~~~~~~~d~vI~D~~~~~------~~~vA~~lgIP~v~~~~ 85 (278)
+.+++++. ++|+||--..-+. +..+|+++|||++.|--
T Consensus 57 l~~~l~~~--~i~~VIDAtHPfA~~is~~a~~a~~~~~ipylR~eR 100 (256)
T TIGR00715 57 LREFLKRH--SIDILVDATHPFAAQITTNATAVCKELGIPYVRFER 100 (256)
T ss_pred HHHHHHhc--CCCEEEEcCCHHHHHHHHHHHHHHHHhCCcEEEEEC
Confidence 55555553 8997765543222 34788899999999854
No 230
>PF09988 DUF2227: Uncharacterized metal-binding protein (DUF2227); InterPro: IPR019250 This entry represents hypothetical bacterial proteins that possess metal binding properties; however, their exact function has not yet been determined.
Probab=21.45 E-value=31 Score=27.21 Aligned_cols=28 Identities=21% Similarity=0.379 Sum_probs=20.5
Q ss_pred eEEe-cCcchhhhcccccccEEEeeCCc-hhHH
Q 035856 197 GKIV-LQAPQTQVLGHFSIGVFVIHSGA-NSVC 227 (278)
Q Consensus 197 ~~v~-~w~pq~~iL~~~~v~~fitHgG~-~s~~ 227 (278)
|... -|.|+..+++|.+ |++|+=. |++.
T Consensus 60 G~Lr~iW~PY~~~~~HRs---~lSH~piiGt~~ 89 (169)
T PF09988_consen 60 GPLRWIWWPYQKLFRHRS---FLSHGPIIGTLL 89 (169)
T ss_pred cchhhhhhhcccccCCCC---cccccchhhHHH
Confidence 4343 6999999999977 8899853 4433
No 231
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis. GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.
Probab=21.38 E-value=99 Score=29.58 Aligned_cols=39 Identities=15% Similarity=0.130 Sum_probs=28.6
Q ss_pred chhhhcccccccEEEe-eCCc-hhHHHHHHhCcceeecccc
Q 035856 204 PQTQVLGHFSIGVFVI-HSGA-NSVCESIANGVLMICRPFY 242 (278)
Q Consensus 204 pq~~iL~~~~v~~fit-HgG~-~s~~eal~~GvP~l~~P~~ 242 (278)
+..+++..+++.+|-+ +=|| .+.+||+++|+|+|+-...
T Consensus 467 ~y~E~~~g~dl~v~PS~yE~fG~~~lEAma~G~PvI~t~~~ 507 (590)
T cd03793 467 DYEEFVRGCHLGVFPSYYEPWGYTPAECTVMGIPSITTNLS 507 (590)
T ss_pred chHHHhhhceEEEeccccCCCCcHHHHHHHcCCCEEEccCc
Confidence 4567788888545433 4565 4789999999999998753
No 232
>TIGR00143 hypF [NiFe] hydrogenase maturation protein HypF. A previously described regulatory effect of HypF mutatation is attributable to loss of activity of a regulatory hydrogenase. A zinc finger-like region CXXCX(18)CXXCX(24)CXXCX(18)CXXC region further supported the regulatory hypothesis. However, more recent work (PUBMED:11375153) shows the direct effect is on the activity of expressed hydrogenases with nickel/iron centers, rather than on expression.
Probab=21.12 E-value=2e+02 Score=28.33 Aligned_cols=44 Identities=16% Similarity=0.157 Sum_probs=30.0
Q ss_pred HHHHHHHHHHcCCCCccEEEeCCC-chhHHHHHHHcCCCeEeEeC
Q 035856 42 FKKGLDAAVSKTGRKISCFLTDAF-LTFSGEMARDMHIPWFPVFV 85 (278)
Q Consensus 42 l~~~l~~l~~~~~~~~d~vI~D~~-~~~~~~vA~~lgIP~v~~~~ 85 (278)
+++.++.+.+-.+-+|++|++|.. -+..-..|+++++|.+..-.
T Consensus 401 ~~~~~~~~~~l~~~~p~~i~~D~HP~y~st~~a~~~~~~~~~vQH 445 (711)
T TIGR00143 401 FKEALNFFLRIYDFEPQDIVCDLHPQYNTTQYAEELSLPVLRVQH 445 (711)
T ss_pred HHHHHHHHHHHHCCCCCEEEEeCCCCchhHHHHHHcCCCeeeeeH
Confidence 444444444433449999999987 34556779999999876643
No 233
>COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]
Probab=20.93 E-value=1.8e+02 Score=26.22 Aligned_cols=37 Identities=22% Similarity=0.076 Sum_probs=25.2
Q ss_pred HHHHHHcCCCCccEEEe--CCCc-hhHHHHHHHcCCCeEeEe
Q 035856 46 LDAAVSKTGRKISCFLT--DAFL-TFSGEMARDMHIPWFPVF 84 (278)
Q Consensus 46 l~~l~~~~~~~~d~vI~--D~~~-~~~~~vA~~lgIP~v~~~ 84 (278)
+++++.+ .+||+|++ |... ..+..+|..++||..=.-
T Consensus 84 ~~~vl~~--~kPD~VlVhGDT~t~lA~alaa~~~~IpV~HvE 123 (383)
T COG0381 84 LSKVLEE--EKPDLVLVHGDTNTTLAGALAAFYLKIPVGHVE 123 (383)
T ss_pred HHHHHHh--hCCCEEEEeCCcchHHHHHHHHHHhCCceEEEe
Confidence 3444444 29999887 4443 445888999999987654
No 234
>PF13135 DUF3947: Protein of unknown function (DUF3947)
Probab=20.55 E-value=97 Score=20.75 Aligned_cols=23 Identities=26% Similarity=0.358 Sum_probs=18.6
Q ss_pred ccccEEEeeCCchhHHHHHHhCc
Q 035856 212 FSIGVFVIHSGANSVCESIANGV 234 (278)
Q Consensus 212 ~~v~~fitHgG~~s~~eal~~Gv 234 (278)
..+|..||+.|.-||..|+....
T Consensus 9 r~i~~aiT~~gAQ~TiqAV~qAm 31 (76)
T PF13135_consen 9 RRIGPAITLSGAQSTIQAVHQAM 31 (76)
T ss_pred ceeeeeEEecchHHHHHHHHHHH
Confidence 45667899999999999987643
No 235
>PLN02470 acetolactate synthase
Probab=20.50 E-value=95 Score=29.66 Aligned_cols=28 Identities=18% Similarity=0.476 Sum_probs=23.5
Q ss_pred cccEEEeeCCc------hhHHHHHHhCcceeecc
Q 035856 213 SIGVFVIHSGA------NSVCESIANGVLMICRP 240 (278)
Q Consensus 213 ~v~~fitHgG~------~s~~eal~~GvP~l~~P 240 (278)
+++++++|.|- +++.+|.+.++|||++.
T Consensus 76 ~~gv~~~t~GPG~~N~l~gia~A~~~~~Pvl~I~ 109 (585)
T PLN02470 76 KVGVCIATSGPGATNLVTGLADALLDSVPLVAIT 109 (585)
T ss_pred CCEEEEECCCccHHHHHHHHHHHHhcCCcEEEEe
Confidence 46688888884 58889999999999995
No 236
>CHL00067 rps2 ribosomal protein S2
Probab=20.49 E-value=1.1e+02 Score=25.34 Aligned_cols=36 Identities=11% Similarity=0.004 Sum_probs=26.5
Q ss_pred CCccEEE-eCCCc-hhHHHHHHHcCCCeEeEeCChhhh
Q 035856 55 RKISCFL-TDAFL-TFSGEMARDMHIPWFPVFVAMPYN 90 (278)
Q Consensus 55 ~~~d~vI-~D~~~-~~~~~vA~~lgIP~v~~~~~~~~~ 90 (278)
..||+|| .|+-- ..+..-|.++|||.+.+.-+...+
T Consensus 160 ~~P~~iiv~d~~~~~~ai~Ea~~l~IPvIaivDTn~~p 197 (230)
T CHL00067 160 KLPDIVIIIDQQEEYTALRECRKLGIPTISILDTNCDP 197 (230)
T ss_pred cCCCEEEEeCCcccHHHHHHHHHcCCCEEEEEeCCCCc
Confidence 4688774 55543 367788999999999998766544
No 237
>PRK05636 replicative DNA helicase; Provisional
Probab=20.46 E-value=1.2e+02 Score=28.50 Aligned_cols=41 Identities=12% Similarity=0.272 Sum_probs=27.1
Q ss_pred HHHHHHHHHHcCCCCccEEEeCCCchhH-------------------HHHHHHcCCCeEeEe
Q 035856 42 FKKGLDAAVSKTGRKISCFLTDAFLTFS-------------------GEMARDMHIPWFPVF 84 (278)
Q Consensus 42 l~~~l~~l~~~~~~~~d~vI~D~~~~~~-------------------~~vA~~lgIP~v~~~ 84 (278)
++..++++... .++++||.|.+..-. ..+|++++||.+.++
T Consensus 363 I~~~~r~~~~~--~~~~lvvIDYLql~~~~~~~~~r~~ei~~isr~LK~lAkel~ipVi~ls 422 (505)
T PRK05636 363 IRSKARRLKQK--HDLKLIVVDYLQLMSSGKRVESRQQEVSEFSRQLKLLAKELDVPLIAIS 422 (505)
T ss_pred HHHHHHHHHHh--cCCCEEEEcchHhcCCCCCCCcHHHHHHHHHHHHHHHHHHhCCeEEEEe
Confidence 44444554443 368999999853321 147889999999876
No 238
>TIGR00639 PurN phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent. In phylogenetic analyses, the member from Saccharomyces cerevisiae shows a long branch length but membership in the family, while the formyltetrahydrofolate deformylases form a closely related outgroup.
Probab=20.34 E-value=2.7e+02 Score=22.24 Aligned_cols=43 Identities=16% Similarity=0.156 Sum_probs=28.2
Q ss_pred HHHHHHHHHHcC-CCCccEEEeCCCchhHHHHHHHcCCCeEeEe
Q 035856 42 FKKGLDAAVSKT-GRKISCFLTDAFLTFSGEMARDMHIPWFPVF 84 (278)
Q Consensus 42 l~~~l~~l~~~~-~~~~d~vI~D~~~~~~~~vA~~lgIP~v~~~ 84 (278)
++..++.+.+.. .-.+.+||+|---.-+...|+++|||...+.
T Consensus 14 ~~~ll~~~~~~~l~~~I~~vi~~~~~~~~~~~A~~~gip~~~~~ 57 (190)
T TIGR00639 14 LQAIIDACKEGKIPASVVLVISNKPDAYGLERAAQAGIPTFVLS 57 (190)
T ss_pred HHHHHHHHHcCCCCceEEEEEECCccchHHHHHHHcCCCEEEEC
Confidence 455555554321 1257777899644556788999999988753
No 239
>TIGR01860 VNFD nitrogenase vanadium-iron protein, alpha chain. This model represents the alpha chain of the vanadium-containing component of the vanadium-iron nitrogenase compound I. The complex also includes a second alpha chain, two beta chains and two delta chains. Compount I interacts with compound II also known as the iron-protein which transfers electrons to compound I where the catalysis occurs.
Probab=20.32 E-value=1.2e+02 Score=28.13 Aligned_cols=23 Identities=30% Similarity=0.634 Sum_probs=20.2
Q ss_pred CccEEEeCCCchhHHHHHHHcCCCeE
Q 035856 56 KISCFLTDAFLTFSGEMARDMHIPWF 81 (278)
Q Consensus 56 ~~d~vI~D~~~~~~~~vA~~lgIP~v 81 (278)
+||++|... ++..+|+++|||.+
T Consensus 397 ~pDliig~s---~~~~~A~klgiP~v 419 (461)
T TIGR01860 397 KPDVIFTGP---RVGELVKKLHIPYV 419 (461)
T ss_pred CCCEEEeCC---cchhhHhhcCCCEE
Confidence 899999875 56789999999998
No 240
>cd01971 Nitrogenase_VnfN_like Nitrogenase_vnfN_like: VnfN subunit of the VnfEN complex-like. This group in addition to VnfN contains a subset of the beta subunit of the nitrogenase MoFe protein and NifN-like proteins. The nitrogenase enzyme system catalyzes the ATP-dependent reduction of dinitrogen to ammonia. NifEN participates in the synthesis of the iron-molybdenum cofactor (FeMoco) of MoFe protein of the molybdenum(Mo)-nitrogenase. NifB-co (an iron and sulfur containing precursor of the FeMoco) from NifB is transferred to NifEN where it is further processed to FeMoco. VnfEN may similarly be a scaffolding protien for the iron-vanadium cofactor (FeVco) of the vanadium-dependent (V)-nitrogenase. NifE and NifN are essential for the Mo-nitrogenase, VnfE and VnfN are not essential for the V-nitrogenase. NifE and NifN can substitute when the vnfEN genes are inactivated.
Probab=20.24 E-value=1.7e+02 Score=26.73 Aligned_cols=26 Identities=12% Similarity=0.208 Sum_probs=22.1
Q ss_pred CccEEEeCCCchhHHHHHHHcCCCeEeEe
Q 035856 56 KISCFLTDAFLTFSGEMARDMHIPWFPVF 84 (278)
Q Consensus 56 ~~d~vI~D~~~~~~~~vA~~lgIP~v~~~ 84 (278)
++|+||... +...+|+++|+|.+...
T Consensus 371 ~~dliig~s---~~~~~a~~~~ip~i~~~ 396 (427)
T cd01971 371 KPPIIFGSS---WERDLAKELGGKILEVS 396 (427)
T ss_pred CCCEEEech---HHHHHHHHcCCCeEEEe
Confidence 499999976 67889999999998764
No 241
>PRK06882 acetolactate synthase 3 catalytic subunit; Validated
Probab=20.19 E-value=89 Score=29.71 Aligned_cols=28 Identities=14% Similarity=0.413 Sum_probs=22.7
Q ss_pred cccEEEeeCC------chhHHHHHHhCcceeecc
Q 035856 213 SIGVFVIHSG------ANSVCESIANGVLMICRP 240 (278)
Q Consensus 213 ~v~~fitHgG------~~s~~eal~~GvP~l~~P 240 (278)
+++++++|.| .+++.+|...++|+|++-
T Consensus 67 ~~gv~~~t~GpG~~N~l~~i~~A~~~~~Pvlvi~ 100 (574)
T PRK06882 67 KVGCVLVTSGPGATNAITGIATAYTDSVPLVILS 100 (574)
T ss_pred CCeEEEECCCccHHHHHHHHHHHhhcCCCEEEEe
Confidence 3558888877 457889999999999984
No 242
>PRK08527 acetolactate synthase 3 catalytic subunit; Validated
Probab=20.13 E-value=91 Score=29.59 Aligned_cols=28 Identities=14% Similarity=0.409 Sum_probs=23.1
Q ss_pred cccEEEeeCC------chhHHHHHHhCcceeecc
Q 035856 213 SIGVFVIHSG------ANSVCESIANGVLMICRP 240 (278)
Q Consensus 213 ~v~~fitHgG------~~s~~eal~~GvP~l~~P 240 (278)
+++++++|.| .+++.+|...++|||++-
T Consensus 66 ~~gv~~~t~GpG~~n~~~gla~A~~~~~Pvl~i~ 99 (563)
T PRK08527 66 KVGVAIVTSGPGFTNAVTGLATAYMDSIPLVLIS 99 (563)
T ss_pred CCEEEEECCCCcHHHHHHHHHHHhhcCCCEEEEe
Confidence 3558888888 468889999999999984
No 243
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=20.10 E-value=1.9e+02 Score=25.18 Aligned_cols=35 Identities=17% Similarity=0.003 Sum_probs=24.2
Q ss_pred HHHHHcCCCCccEEEeCCC--chhHHHHHHHcCCCeEeE
Q 035856 47 DAAVSKTGRKISCFLTDAF--LTFSGEMARDMHIPWFPV 83 (278)
Q Consensus 47 ~~l~~~~~~~~d~vI~D~~--~~~~~~vA~~lgIP~v~~ 83 (278)
.+++++ .+||+|++... ...+..+++..++|.+..
T Consensus 84 ~~~ik~--~~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~ 120 (357)
T PRK00726 84 RKILKR--FKPDVVVGFGGYVSGPGGLAARLLGIPLVIH 120 (357)
T ss_pred HHHHHh--cCCCEEEECCCcchhHHHHHHHHcCCCEEEE
Confidence 334444 38999999963 334556678889999865
Done!