Query 035856
Match_columns 278
No_of_seqs 207 out of 1722
Neff 9.5
Searched_HMMs 29240
Date Mon Mar 25 11:42:25 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/035856.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/035856hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hbf_A Flavonoid 3-O-glucosylt 100.0 5.9E-53 2E-57 381.5 22.6 268 4-278 66-410 (454)
2 2c1x_A UDP-glucose flavonoid 3 100.0 1.4E-45 4.7E-50 335.3 21.4 267 5-278 62-408 (456)
3 2pq6_A UDP-glucuronosyl/UDP-gl 100.0 3.1E-42 1.1E-46 315.7 21.0 267 5-278 64-435 (482)
4 2vch_A Hydroquinone glucosyltr 100.0 1E-40 3.4E-45 305.2 26.6 266 4-278 60-425 (480)
5 2acv_A Triterpene UDP-glucosyl 100.0 9.2E-40 3.1E-44 297.6 21.8 263 5-278 67-421 (463)
6 2iya_A OLEI, oleandomycin glyc 100.0 8.3E-27 2.8E-31 209.8 20.7 256 6-277 59-384 (424)
7 1iir_A Glycosyltransferase GTF 99.9 9.1E-26 3.1E-30 202.6 19.6 250 5-277 46-364 (415)
8 4amg_A Snogd; transferase, pol 99.9 3.5E-25 1.2E-29 197.3 19.7 83 192-277 285-367 (400)
9 1rrv_A Glycosyltransferase GTF 99.9 1E-24 3.5E-29 195.9 20.3 215 43-277 82-365 (416)
10 3h4t_A Glycosyltransferase GTF 99.9 4.7E-22 1.6E-26 178.0 18.7 82 193-277 266-347 (404)
11 2iyf_A OLED, oleandomycin glyc 99.9 1.7E-21 5.8E-26 175.3 20.7 257 5-277 53-362 (430)
12 3rsc_A CALG2; TDP, enediyne, s 99.9 3.3E-21 1.1E-25 172.5 19.2 255 5-277 66-376 (415)
13 3ia7_A CALG4; glycosysltransfe 99.9 9.2E-21 3.1E-25 168.6 21.1 255 5-277 50-361 (402)
14 2p6p_A Glycosyl transferase; X 99.8 1.2E-19 4E-24 160.9 19.3 205 56-277 107-342 (384)
15 2yjn_A ERYCIII, glycosyltransf 99.8 2.2E-19 7.4E-24 162.3 20.3 82 193-277 317-398 (441)
16 4fzr_A SSFS6; structural genom 99.8 4.4E-18 1.5E-22 151.5 18.9 82 193-277 282-363 (398)
17 3oti_A CALG3; calicheamicin, T 99.7 5.5E-17 1.9E-21 144.5 17.9 81 193-276 281-363 (398)
18 3tsa_A SPNG, NDP-rhamnosyltran 99.7 1.5E-16 5.2E-21 141.1 16.8 82 193-277 268-351 (391)
19 2o6l_A UDP-glucuronosyltransfe 99.7 3.3E-17 1.1E-21 128.9 8.8 83 194-277 67-149 (170)
20 3otg_A CALG1; calicheamicin, T 99.7 2.8E-15 9.5E-20 133.7 18.7 82 193-277 290-371 (412)
21 3s2u_A UDP-N-acetylglucosamine 99.4 2.2E-11 7.5E-16 107.2 16.2 81 194-277 234-319 (365)
22 2jzc_A UDP-N-acetylglucosamine 99.1 1.7E-11 5.8E-16 99.9 2.7 66 197-265 116-187 (224)
23 1f0k_A MURG, UDP-N-acetylgluco 98.5 2.8E-07 9.4E-12 80.2 7.9 81 195-278 237-321 (364)
24 3hbm_A UDP-sugar hydrolase; PS 98.4 5.2E-07 1.8E-11 76.2 6.8 66 195-264 208-274 (282)
25 3okp_A GDP-mannose-dependent a 96.6 0.081 2.8E-06 45.5 15.1 74 194-277 252-339 (394)
26 2f9f_A First mannosyl transfer 96.5 0.0048 1.6E-07 47.6 6.0 74 194-277 77-157 (177)
27 1v4v_A UDP-N-acetylglucosamine 96.4 0.0071 2.4E-07 52.3 7.3 72 195-277 255-329 (376)
28 1vgv_A UDP-N-acetylglucosamine 96.1 0.0061 2.1E-07 52.8 5.5 72 195-277 263-337 (384)
29 3beo_A UDP-N-acetylglucosamine 95.0 0.046 1.6E-06 46.9 6.7 72 195-277 263-337 (375)
30 3ot5_A UDP-N-acetylglucosamine 94.3 0.054 1.8E-06 47.7 5.4 72 195-277 282-356 (403)
31 3dzc_A UDP-N-acetylglucosamine 93.9 0.06 2E-06 47.3 5.0 72 195-277 288-362 (396)
32 2gek_A Phosphatidylinositol ma 93.8 0.086 2.9E-06 45.6 5.8 77 194-277 262-344 (406)
33 2iuy_A Avigt4, glycosyltransfe 93.1 0.097 3.3E-06 44.4 4.8 75 195-277 212-303 (342)
34 2iw1_A Lipopolysaccharide core 93.0 0.15 5E-06 43.6 5.8 75 194-277 252-332 (374)
35 3c48_A Predicted glycosyltrans 92.4 0.17 5.8E-06 44.4 5.5 75 194-277 305-386 (438)
36 2bfw_A GLGA glycogen synthase; 92.2 0.31 1.1E-05 37.6 6.3 72 196-277 96-175 (200)
37 4hwg_A UDP-N-acetylglucosamine 91.4 0.34 1.2E-05 42.3 6.3 72 195-277 263-337 (385)
38 3rhz_A GTF3, nucleotide sugar 91.0 0.29 9.8E-06 42.0 5.3 63 196-263 215-289 (339)
39 2xci_A KDO-transferase, 3-deox 90.9 0.26 8.8E-06 42.8 5.0 75 196-277 261-341 (374)
40 2x6q_A Trehalose-synthase TRET 90.9 0.32 1.1E-05 42.3 5.6 73 194-277 292-374 (416)
41 2vsy_A XCC0866; transferase, g 90.2 0.37 1.3E-05 43.9 5.7 44 195-240 434-483 (568)
42 3fro_A GLGA glycogen synthase; 88.3 0.79 2.7E-05 39.8 6.1 71 197-277 313-390 (439)
43 2hy7_A Glucuronosyltransferase 87.7 0.51 1.7E-05 41.3 4.5 71 194-277 264-347 (406)
44 3q3e_A HMW1C-like glycosyltran 87.3 0.47 1.6E-05 44.0 4.1 44 195-240 499-548 (631)
45 4gyw_A UDP-N-acetylglucosamine 86.9 0.42 1.4E-05 45.4 3.7 48 194-245 579-632 (723)
46 2r60_A Glycosyl transferase, g 86.7 0.9 3.1E-05 40.6 5.7 75 194-277 334-419 (499)
47 2jjm_A Glycosyl transferase, g 84.6 0.35 1.2E-05 41.7 1.8 74 195-277 267-345 (394)
48 2x0d_A WSAF; GT4 family, trans 77.2 0.87 3E-05 40.0 1.7 73 195-277 295-374 (413)
49 3qhp_A Type 1 capsular polysac 76.8 2.5 8.5E-05 31.2 4.0 41 196-239 57-105 (166)
50 3oy2_A Glycosyltransferase B73 74.4 3.2 0.00011 35.7 4.6 43 197-241 256-305 (413)
51 4hwg_A UDP-N-acetylglucosamine 72.0 7.3 0.00025 33.7 6.3 39 40-84 84-124 (385)
52 2qzs_A Glycogen synthase; glyc 69.8 7 0.00024 34.4 5.8 76 194-277 346-436 (485)
53 1rzu_A Glycogen synthase 1; gl 69.6 7.1 0.00024 34.4 5.8 74 194-277 345-435 (485)
54 3s28_A Sucrose synthase 1; gly 67.3 4 0.00014 39.3 3.8 73 195-276 640-724 (816)
55 3dzc_A UDP-N-acetylglucosamine 57.3 19 0.00065 31.0 6.1 29 56-84 111-142 (396)
56 3to5_A CHEY homolog; alpha(5)b 55.1 20 0.00068 25.7 4.9 31 56-86 57-96 (134)
57 2q5c_A NTRC family transcripti 53.7 14 0.00048 28.6 4.2 42 40-87 129-170 (196)
58 2lpm_A Two-component response 52.4 13 0.00045 26.4 3.5 40 42-84 42-86 (123)
59 3ot5_A UDP-N-acetylglucosamine 50.7 27 0.00092 30.2 5.9 29 56-84 114-145 (403)
60 3tqr_A Phosphoribosylglycinami 46.2 27 0.00094 27.5 4.7 43 42-84 19-61 (215)
61 2pju_A Propionate catabolism o 43.8 25 0.00086 27.9 4.2 40 39-84 140-179 (225)
62 3p9x_A Phosphoribosylglycinami 41.7 35 0.0012 26.8 4.7 43 42-84 16-59 (211)
63 3pdi_B Nitrogenase MOFE cofact 41.3 24 0.00082 31.3 4.1 33 46-83 367-399 (458)
64 2iz6_A Molybdenum cofactor car 40.8 57 0.002 24.7 5.7 42 201-242 95-140 (176)
65 3gl9_A Response regulator; bet 40.7 43 0.0015 22.7 4.7 42 42-86 35-85 (122)
66 1f0k_A MURG, UDP-N-acetylgluco 40.5 50 0.0017 27.3 6.0 30 56-85 96-127 (364)
67 1v4v_A UDP-N-acetylglucosamine 40.5 30 0.001 29.0 4.6 37 46-84 83-122 (376)
68 3t6k_A Response regulator rece 36.4 62 0.0021 22.3 5.1 42 42-86 37-87 (136)
69 3av3_A Phosphoribosylglycinami 35.8 49 0.0017 25.8 4.7 43 42-84 17-60 (212)
70 4ds3_A Phosphoribosylglycinami 35.0 39 0.0013 26.5 4.0 44 41-84 20-64 (209)
71 1meo_A Phosophoribosylglycinam 34.8 52 0.0018 25.7 4.7 43 42-84 14-57 (209)
72 2vqe_B 30S ribosomal protein S 34.7 51 0.0017 26.7 4.7 36 55-90 157-194 (256)
73 3m6m_D Sensory/regulatory prot 32.4 55 0.0019 22.9 4.3 40 43-85 48-98 (143)
74 3auf_A Glycinamide ribonucleot 31.8 50 0.0017 26.2 4.2 44 41-84 35-79 (229)
75 1o97_C Electron transferring f 31.1 65 0.0022 26.1 4.9 42 42-85 100-147 (264)
76 1vgv_A UDP-N-acetylglucosamine 30.9 59 0.002 27.1 4.9 30 56-85 86-118 (384)
77 3da8_A Probable 5'-phosphoribo 30.6 38 0.0013 26.6 3.3 41 42-83 26-66 (215)
78 1efv_B Electron transfer flavo 29.8 71 0.0024 25.8 4.9 42 42-85 104-151 (255)
79 4hn9_A Iron complex transport 29.5 56 0.0019 27.2 4.4 37 46-85 109-145 (335)
80 1jkx_A GART;, phosphoribosylgl 29.3 72 0.0025 24.9 4.7 43 42-84 14-57 (212)
81 3nb0_A Glycogen [starch] synth 28.5 54 0.0019 30.9 4.3 46 194-241 489-550 (725)
82 2a9o_A Response regulator; ess 27.7 1.2E+02 0.0041 19.8 5.3 31 56-86 45-81 (120)
83 1tmy_A CHEY protein, TMY; chem 27.7 1.1E+02 0.0039 20.0 5.2 41 43-86 37-84 (120)
84 3u7q_A Nitrogenase molybdenum- 27.5 63 0.0022 28.9 4.6 25 56-83 417-441 (492)
85 3c3m_A Response regulator rece 27.5 1E+02 0.0035 21.1 5.0 41 43-86 37-86 (138)
86 3cg0_A Response regulator rece 27.3 98 0.0034 21.0 4.9 42 42-86 43-91 (140)
87 2etv_A Iron(III) ABC transport 27.1 63 0.0021 27.1 4.3 38 45-85 88-126 (346)
88 1efp_B ETF, protein (electron 27.0 70 0.0024 25.7 4.4 30 56-85 113-148 (252)
89 1lt8_A Betaine-homocysteine me 26.9 1.4E+02 0.0047 25.9 6.5 46 39-87 138-188 (406)
90 3pdi_A Nitrogenase MOFE cofact 26.5 41 0.0014 30.0 3.1 26 56-84 401-426 (483)
91 3bbn_B Ribosomal protein S2; s 26.4 48 0.0016 26.4 3.2 34 56-89 157-192 (231)
92 3h1g_A Chemotaxis protein CHEY 26.3 1.4E+02 0.0049 20.0 5.6 42 43-86 40-90 (129)
93 2ywr_A Phosphoribosylglycinami 26.1 97 0.0033 24.2 4.9 42 42-84 15-58 (216)
94 3f6p_A Transcriptional regulat 25.8 1.1E+02 0.0037 20.3 4.8 41 42-85 35-81 (120)
95 3a10_A Response regulator; pho 25.8 1.4E+02 0.0048 19.4 5.6 41 43-86 35-82 (116)
96 2w36_A Endonuclease V; hypoxan 24.7 83 0.0028 24.9 4.2 35 50-84 97-138 (225)
97 3b2n_A Uncharacterized protein 24.6 1.1E+02 0.0039 20.7 4.7 40 43-85 39-85 (133)
98 3kcq_A Phosphoribosylglycinami 24.5 52 0.0018 25.8 3.1 43 42-84 22-65 (215)
99 3goc_A Endonuclease V; alpha-b 24.4 1E+02 0.0035 24.6 4.7 34 51-84 102-142 (237)
100 2qzj_A Two-component response 24.2 1.2E+02 0.004 20.8 4.8 41 43-86 38-84 (136)
101 3md9_A Hemin-binding periplasm 23.8 74 0.0025 25.0 4.0 37 45-84 51-89 (255)
102 2q8p_A Iron-regulated surface 23.7 76 0.0026 25.0 4.0 38 45-85 52-90 (260)
103 2xdq_B Light-independent proto 23.6 48 0.0016 29.8 3.0 26 56-84 372-397 (511)
104 1srr_A SPO0F, sporulation resp 22.9 1.2E+02 0.004 20.2 4.5 41 43-86 37-84 (124)
105 1mio_B Nitrogenase molybdenum 22.8 71 0.0024 28.1 4.0 33 46-83 377-409 (458)
106 2qr3_A Two-component system re 22.7 1.3E+02 0.0044 20.4 4.8 40 43-85 37-88 (140)
107 1dbw_A Transcriptional regulat 22.4 1.1E+02 0.0037 20.5 4.2 32 55-86 46-84 (126)
108 3crn_A Response regulator rece 22.3 1.4E+02 0.0048 20.1 4.8 41 43-86 37-84 (132)
109 3aek_B Light-independent proto 22.1 53 0.0018 29.7 3.0 25 56-83 349-373 (525)
110 1xhf_A DYE resistance, aerobic 21.5 1.6E+02 0.0054 19.4 4.9 31 56-86 47-83 (123)
111 3nhm_A Response regulator; pro 21.3 1.9E+02 0.0065 19.3 5.4 41 42-85 36-85 (133)
112 1mb3_A Cell division response 21.1 1.4E+02 0.0047 19.7 4.5 30 56-85 45-83 (124)
113 2r7a_A Bacterial heme binding 21.1 91 0.0031 24.5 4.0 37 45-84 51-89 (256)
114 1n2z_A Vitamin B12 transport p 20.8 1.1E+02 0.0039 23.8 4.5 37 45-84 49-87 (245)
115 3cfy_A Putative LUXO repressor 20.6 1.5E+02 0.0052 20.2 4.8 40 43-85 38-84 (137)
116 3ezw_A Glycerol kinase; glycer 20.5 2.9E+02 0.01 24.6 7.6 62 25-86 371-436 (526)
117 3e61_A Putative transcriptiona 20.5 1.4E+02 0.0047 23.4 5.0 40 44-86 55-95 (277)
118 1zh2_A KDP operon transcriptio 20.5 1.5E+02 0.0052 19.3 4.6 31 56-86 45-81 (121)
119 2r25_B Osmosensing histidine p 20.2 2E+02 0.007 19.3 5.4 31 55-85 51-89 (133)
No 1
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=100.00 E-value=5.9e-53 Score=381.51 Aligned_cols=268 Identities=44% Similarity=0.714 Sum_probs=223.6
Q ss_pred CCCceEEecCCCCCCCCCCCCCCcHHHHHHHHHHchHHHHHHHHHHHHcCCCCccEEEeCCCchhHHHHHHHcCCCeEeE
Q 035856 4 PDNIRVYDVEDGVPMKYASTESNPLEAVELFVKATPENFKKGLDAAVSKTGRKISCFLTDAFLTFSGEMARDMHIPWFPV 83 (278)
Q Consensus 4 ~~~i~~~~i~~glp~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~d~vI~D~~~~~~~~vA~~lgIP~v~~ 83 (278)
+++|+|+++|||+|++.+.+. ++..++..+.+++.+.+++.+++++++.+.++||||+|.+++|+.++|+++|||++.|
T Consensus 66 ~~~i~~~~ipdglp~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iI~D~~~~w~~~vA~~lgIP~~~f 144 (454)
T 3hbf_A 66 LPNIKYYNVHDGLPKGYVSSG-NPREPIFLFIKAMQENFKHVIDEAVAETGKNITCLVTDAFFWFGADLAEEMHAKWVPL 144 (454)
T ss_dssp CTTEEEEECCCCCCTTCCCCS-CTTHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEETTCTTHHHHHHHTTCEEEEE
T ss_pred CCCceEEecCCCCCCCccccC-ChHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcEEEECCcchHHHHHHHHhCCCEEEE
Confidence 457999999999999887763 5666777777878788999999987765568999999999999999999999999999
Q ss_pred eCChhhhhhhhhcchhhhhh-------------hccC-------Cc--------chHHHHHHHHHhcccCCCcEEEecch
Q 035856 84 FVAMPYNGSAHIHTDLIHQF-------------FINN-------CE--------ESLFSSMLSKLGGVLPQASAAVMNFY 135 (278)
Q Consensus 84 ~~~~~~~~~~~~~~~~l~~~-------------~~~~-------~~--------~~~~~~~~~~~~~~~~~~~~~l~nt~ 135 (278)
++++++....+++.+.+.+. .+|| +. ...+.+...+..+...+++++++|||
T Consensus 145 ~t~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iPg~p~~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~ 224 (454)
T 3hbf_A 145 WTAGPHSLLTHVYTDLIREKTGSKEVHDVKSIDVLPGFPELKASDLPEGVIKDIDVPFATMLHKMGLELPRANAVAINSF 224 (454)
T ss_dssp ECSCHHHHHHHHTHHHHHHTCCHHHHTTSSCBCCSTTSCCBCGGGSCTTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSC
T ss_pred eCccHHHHHHHHhhHHHHhhcCCCccccccccccCCCCCCcChhhCchhhccCCchHHHHHHHHHHHhhccCCEEEECCh
Confidence 99999988877765543321 0232 11 12345566667777889999999999
Q ss_pred HhhhccchhhHHHhhcCCeEEEecCCCCCCCCCCCCCCCCcchhhhHhhhcCCCCC------------------------
Q 035856 136 QELYCSSQLTNDLNSKVPSLLKVGFLTQPLPPPPLPPSDSDETGYLQWLDRQKPKS------------------------ 191 (278)
Q Consensus 136 ~~le~~~~~~~~~~~~~~~v~~VG~~~~pl~~~~~~~~~~~~~~~~~wld~~~~~s------------------------ 191 (278)
++|| +++++++++.+|++++|| |++.........++.+|.+|||.+++++
T Consensus 225 ~eLE--~~~~~~~~~~~~~v~~vG----Pl~~~~~~~~~~~~~~~~~wLd~~~~~~vVyvsfGS~~~~~~~~~~el~~~l 298 (454)
T 3hbf_A 225 ATIH--PLIENELNSKFKLLLNVG----PFNLTTPQRKVSDEHGCLEWLDQHENSSVVYISFGSVVTPPPHELTALAESL 298 (454)
T ss_dssp GGGC--HHHHHHHHTTSSCEEECC----CHHHHSCCSCCCCTTCHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHH
T ss_pred hHhC--HHHHHHHHhcCCCEEEEC----CcccccccccccchHHHHHHHhcCCCCceEEEecCCCCcCCHHHHHHHHHHH
Confidence 9999 999999998889999999 9975432222233467999999987765
Q ss_pred -------------------------CCCCCeEEecCcchhhhcccccccEEEeeCCchhHHHHHHhCcceeeccccCChh
Q 035856 192 -------------------------RTSGRGKIVLQAPQTQVLGHFSIGVFVIHSGANSVCESIANGVLMICRPFYGDHR 246 (278)
Q Consensus 192 -------------------------~~~~~~~v~~w~pq~~iL~~~~v~~fitHgG~~s~~eal~~GvP~l~~P~~~DQ~ 246 (278)
+.++|+++++|+||.+||+|++|++|||||||||++||+++|||||+||+++||+
T Consensus 299 ~~~~~~flw~~~~~~~~~lp~~~~~~~~~~~~vv~w~Pq~~vL~h~~v~~fvtH~G~~S~~Eal~~GvP~i~~P~~~DQ~ 378 (454)
T 3hbf_A 299 EECGFPFIWSFRGDPKEKLPKGFLERTKTKGKIVAWAPQVEILKHSSVGVFLTHSGWNSVLECIVGGVPMISRPFFGDQG 378 (454)
T ss_dssp HHHCCCEEEECCSCHHHHSCTTHHHHTTTTEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHH
T ss_pred HhCCCeEEEEeCCcchhcCCHhHHhhcCCceEEEeeCCHHHHHhhcCcCeEEecCCcchHHHHHHcCCCEecCcccccHH
Confidence 1245889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcceEEecCCCcCHHHHHhhhhC
Q 035856 247 MNARMVEEVWGIGVKVEGILLTKSGVLQSLDL 278 (278)
Q Consensus 247 ~na~~~~~~~g~G~~l~~~~~~~~~l~~~i~~ 278 (278)
.||+++++.||+|+.++.+.+++++|+++|++
T Consensus 379 ~Na~~v~~~~g~Gv~l~~~~~~~~~l~~av~~ 410 (454)
T 3hbf_A 379 LNTILTESVLEIGVGVDNGVLTKESIKKALEL 410 (454)
T ss_dssp HHHHHHHTTSCSEEECGGGSCCHHHHHHHHHH
T ss_pred HHHHHHHHhhCeeEEecCCCCCHHHHHHHHHH
Confidence 99999999789999999888999999999863
No 2
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=100.00 E-value=1.4e-45 Score=335.34 Aligned_cols=267 Identities=46% Similarity=0.817 Sum_probs=206.5
Q ss_pred CCceEEecCCCCCCCCCCCCCCcHHHHHHHHHHchHHHHHHHHHHHHcCCCCccEEEeCCCchhHHHHHHHcCCCeEeEe
Q 035856 5 DNIRVYDVEDGVPMKYASTESNPLEAVELFVKATPENFKKGLDAAVSKTGRKISCFLTDAFLTFSGEMARDMHIPWFPVF 84 (278)
Q Consensus 5 ~~i~~~~i~~glp~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~d~vI~D~~~~~~~~vA~~lgIP~v~~~ 84 (278)
++|+|+++++|+|++.+.. .++...+..+.+++.+.+++.+++++++.+.++||||+|.++.|+..+|+++|||++.|+
T Consensus 62 ~~i~~~~i~~glp~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~ 140 (456)
T 2c1x_A 62 CNIKSYDISDGVPEGYVFA-GRPQEDIELFTRAAPESFRQGMVMAVAETGRPVSCLVADAFIWFAADMAAEMGVAWLPFW 140 (456)
T ss_dssp TTEEEEECCCCCCTTCCCC-CCTTHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCEEEEETTSTTHHHHHHHHTCEEEEEE
T ss_pred CceEEEeCCCCCCCccccc-CChHHHHHHHHHHhHHHHHHHHHHHHhccCCCceEEEECCchHhHHHHHHHhCCCEEEEe
Confidence 5899999999999876543 355566666666666678888888765434699999999999999999999999999999
Q ss_pred CChhhhhhhhhcchhhhhh---------------hccC----------------CcchHHHHHHHHHhcccCCCcEEEec
Q 035856 85 VAMPYNGSAHIHTDLIHQF---------------FINN----------------CEESLFSSMLSKLGGVLPQASAAVMN 133 (278)
Q Consensus 85 ~~~~~~~~~~~~~~~l~~~---------------~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~l~n 133 (278)
++++.....+++.+.+.+. ..|+ .....+.....+..+..++++++++|
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~n 220 (456)
T 2c1x_A 141 TAGPNSLSTHVYIDEIREKIGVSGIQGREDELLNFIPGMSKVRFRDLQEGIVFGNLNSLFSRMLHRMGQVLPKATAVFIN 220 (456)
T ss_dssp CSCHHHHHHHHTHHHHHHHHCSSCCTTCTTCBCTTSTTCTTCBGGGSCTTTSSSCTTSHHHHHHHHHHHHGGGSSCEEES
T ss_pred CccHHHHHHHhhhHHHHhccCCcccccccccccccCCCCCcccHHhCchhhcCCCcccHHHHHHHHHHHhhhhCCEEEEC
Confidence 9987766544332221110 0111 00112334444555566789999999
Q ss_pred chHhhhccchhhHHHhhcCCeEEEecCCCCCCCCCCCCCCCCcchhhhHhhhcCCCCC----------------------
Q 035856 134 FYQELYCSSQLTNDLNSKVPSLLKVGFLTQPLPPPPLPPSDSDETGYLQWLDRQKPKS---------------------- 191 (278)
Q Consensus 134 t~~~le~~~~~~~~~~~~~~~v~~VG~~~~pl~~~~~~~~~~~~~~~~~wld~~~~~s---------------------- 191 (278)
|+++|| +++++.+++.++++++|| |++.........++.+|.+|||.+++++
T Consensus 221 s~~~le--~~~~~~~~~~~~~~~~vG----pl~~~~~~~~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~ 294 (456)
T 2c1x_A 221 SFEELD--DSLTNDLKSKLKTYLNIG----PFNLITPPPVVPNTTGCLQWLKERKPTSVVYISFGTVTTPPPAEVVALSE 294 (456)
T ss_dssp SCGGGC--HHHHHHHHHHSSCEEECC----CHHHHC---------CHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHH
T ss_pred ChHHHh--HHHHHHHHhcCCCEEEec----CcccCcccccccchhhHHHHHhcCCCcceEEEecCccccCCHHHHHHHHH
Confidence 999999 888888888888999999 9875332111122356999999886654
Q ss_pred -------------------CC--------CCCeEEecCcchhhhcccccccEEEeeCCchhHHHHHHhCcceeeccccCC
Q 035856 192 -------------------RT--------SGRGKIVLQAPQTQVLGHFSIGVFVIHSGANSVCESIANGVLMICRPFYGD 244 (278)
Q Consensus 192 -------------------~~--------~~~~~v~~w~pq~~iL~~~~v~~fitHgG~~s~~eal~~GvP~l~~P~~~D 244 (278)
.. ++|+++++|+||.++|+|+++++|||||||||++||+++|||||++|+++|
T Consensus 295 ~l~~~~~~~lw~~~~~~~~~l~~~~~~~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~S~~Eal~~GvP~i~~P~~~d 374 (456)
T 2c1x_A 295 ALEASRVPFIWSLRDKARVHLPEGFLEKTRGYGMVVPWAPQAEVLAHEAVGAFVTHCGWNSLWESVAGGVPLICRPFFGD 374 (456)
T ss_dssp HHHHHTCCEEEECCGGGGGGSCTTHHHHHTTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTT
T ss_pred HHHhcCCeEEEEECCcchhhCCHHHHhhcCCceEEecCCCHHHHhcCCcCCEEEecCCcchHHHHHHhCceEEecCChhh
Confidence 01 357899999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHhcceEEecCCCcCHHHHHhhhhC
Q 035856 245 HRMNARMVEEVWGIGVKVEGILLTKSGVLQSLDL 278 (278)
Q Consensus 245 Q~~na~~~~~~~g~G~~l~~~~~~~~~l~~~i~~ 278 (278)
|+.||+++++.||+|+.++.+.+++++|+++|++
T Consensus 375 Q~~Na~~l~~~~g~g~~l~~~~~~~~~l~~~i~~ 408 (456)
T 2c1x_A 375 QRLNGRMVEDVLEIGVRIEGGVFTKSGLMSCFDQ 408 (456)
T ss_dssp HHHHHHHHHHTSCCEEECGGGSCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCeEEEecCCCcCHHHHHHHHHH
Confidence 9999999999999999998778999999998863
No 3
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=100.00 E-value=3.1e-42 Score=315.66 Aligned_cols=267 Identities=24% Similarity=0.413 Sum_probs=191.9
Q ss_pred CCceEEecCCCCCCCC--CCCCCCcHHHHHHHHHHchHHHHHHHHHHHHcC-CCCccEEEeCCCchhHHHHHHHcCCCeE
Q 035856 5 DNIRVYDVEDGVPMKY--ASTESNPLEAVELFVKATPENFKKGLDAAVSKT-GRKISCFLTDAFLTFSGEMARDMHIPWF 81 (278)
Q Consensus 5 ~~i~~~~i~~glp~~~--~~~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~-~~~~d~vI~D~~~~~~~~vA~~lgIP~v 81 (278)
++++|+++|+++|+.. .....+...++..+.+.+.+.+++.++++.++. +.++||||+|.++.|+..+|+++|||++
T Consensus 64 ~~i~~~~l~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v 143 (482)
T 2pq6_A 64 TDFNFESIPDGLTPMEGDGDVSQDVPTLCQSVRKNFLKPYCELLTRLNHSTNVPPVTCLVSDCCMSFTIQAAEEFELPNV 143 (482)
T ss_dssp -CEEEEEECCCCC---------CCHHHHHHHHTTSSHHHHHHHHHHHHTCSSSCCCCEEEEETTCTHHHHHHHHTTCCEE
T ss_pred CceEEEECCCCCCCcccccCcchhHHHHHHHHHHHhhHHHHHHHHHHhhhccCCCceEEEECCcchhHHHHHHHcCCCEE
Confidence 3899999999998731 111123333343333444555666665543210 2589999999999999999999999999
Q ss_pred eEeCChhhhhhhhhcchhh------------------hhhh---ccC-------Cc---------chHHHHHHHHHhccc
Q 035856 82 PVFVAMPYNGSAHIHTDLI------------------HQFF---INN-------CE---------ESLFSSMLSKLGGVL 124 (278)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~l------------------~~~~---~~~-------~~---------~~~~~~~~~~~~~~~ 124 (278)
.+++++++....+.+.+.+ .+.. .++ +. ...+.+.+.+..+..
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 223 (482)
T 2pq6_A 144 LYFSSSACSLLNVMHFRSFVERGIIPFKDESYLTNGCLETKVDWIPGLKNFRLKDIVDFIRTTNPNDIMLEFFIEVADRV 223 (482)
T ss_dssp EEECSCHHHHHHHTTHHHHHHTTCSSCSSGGGGTSSGGGCBCCSSTTCCSCBGGGSCGGGCCSCTTCHHHHHHHHHHHTC
T ss_pred EEecccHHHHHHHHHHHHHHhcCCCCCccccccccccccCccccCCCCCCCchHHCchhhccCCcccHHHHHHHHHHHhh
Confidence 9999988765443221110 0111 111 00 012233344455667
Q ss_pred CCCcEEEecchHhhhccchhhHHHhhcCCeEEEecCCCCCCCCC-CCC-----------CCCCcchhhhHhhhcCCCCC-
Q 035856 125 PQASAAVMNFYQELYCSSQLTNDLNSKVPSLLKVGFLTQPLPPP-PLP-----------PSDSDETGYLQWLDRQKPKS- 191 (278)
Q Consensus 125 ~~~~~~l~nt~~~le~~~~~~~~~~~~~~~v~~VG~~~~pl~~~-~~~-----------~~~~~~~~~~~wld~~~~~s- 191 (278)
.+++++++||+++|| +++++++++.++++++|| |++.. ... ....++..|.+|||++++++
T Consensus 224 ~~~~~vl~nt~~~le--~~~~~~~~~~~~~v~~VG----Pl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~wld~~~~~~v 297 (482)
T 2pq6_A 224 NKDTTILLNTFNELE--SDVINALSSTIPSIYPIG----PLPSLLKQTPQIHQLDSLDSNLWKEDTECLDWLESKEPGSV 297 (482)
T ss_dssp CTTCCEEESSCGGGG--HHHHHHHHTTCTTEEECC----CHHHHHHTSTTGGGGCC---------CHHHHHHTTSCTTCE
T ss_pred ccCCEEEEcChHHHh--HHHHHHHHHhCCcEEEEc----CCcccccccccccccccccccccccchHHHHHHhcCCCCce
Confidence 789999999999999 888888888878999999 99753 111 11123456999999987654
Q ss_pred ----------------------------------C----------C--------CCCeEEecCcchhhhcccccccEEEe
Q 035856 192 ----------------------------------R----------T--------SGRGKIVLQAPQTQVLGHFSIGVFVI 219 (278)
Q Consensus 192 ----------------------------------~----------~--------~~~~~v~~w~pq~~iL~~~~v~~fit 219 (278)
+ . ++|+++++|+||.++|+|+++++|||
T Consensus 298 v~vs~GS~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~~~pq~~~L~h~~~~~~vt 377 (482)
T 2pq6_A 298 VYVNFGSTTVMTPEQLLEFAWGLANCKKSFLWIIRPDLVIGGSVIFSSEFTNEIADRGLIASWCPQDKVLNHPSIGGFLT 377 (482)
T ss_dssp EEEECCSSSCCCHHHHHHHHHHHHHTTCEEEEECCGGGSTTTGGGSCHHHHHHHTTTEEEESCCCHHHHHTSTTEEEEEE
T ss_pred EEEecCCcccCCHHHHHHHHHHHHhcCCcEEEEEcCCccccccccCcHhHHHhcCCCEEEEeecCHHHHhcCCCCCEEEe
Confidence 1 1 25789999999999999999999999
Q ss_pred eCCchhHHHHHHhCcceeeccccCChhHHHHHHHHHhcceEEecCCCcCHHHHHhhhhC
Q 035856 220 HSGANSVCESIANGVLMICRPFYGDHRMNARMVEEVWGIGVKVEGILLTKSGVLQSLDL 278 (278)
Q Consensus 220 HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~~~~l~~~i~~ 278 (278)
||||||++||+++|||||++|+++||+.||+++++.||+|+.++ ..+++++|+++|++
T Consensus 378 h~G~~s~~Eal~~GvP~i~~P~~~dQ~~na~~~~~~~G~g~~l~-~~~~~~~l~~~i~~ 435 (482)
T 2pq6_A 378 HCGWNSTTESICAGVPMLCWPFFADQPTDCRFICNEWEIGMEID-TNVKREELAKLINE 435 (482)
T ss_dssp CCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECC-SSCCHHHHHHHHHH
T ss_pred cCCcchHHHHHHcCCCEEecCcccchHHHHHHHHHHhCEEEEEC-CCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999985569999998 57999999998863
No 4
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=100.00 E-value=1e-40 Score=305.18 Aligned_cols=266 Identities=24% Similarity=0.322 Sum_probs=186.8
Q ss_pred CCCceEEecCCCCCCCCCCCCCCcHHHHHHHHHHchHHHHHHHHHHHHcCCCCc-cEEEeCCCchhHHHHHHHcCCCeEe
Q 035856 4 PDNIRVYDVEDGVPMKYASTESNPLEAVELFVKATPENFKKGLDAAVSKTGRKI-SCFLTDAFLTFSGEMARDMHIPWFP 82 (278)
Q Consensus 4 ~~~i~~~~i~~glp~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~-d~vI~D~~~~~~~~vA~~lgIP~v~ 82 (278)
+.+++|+++|++..++.... .+....+........+.+++.++++.+ +.++ ||||+|.++.|+..+|+++|||++.
T Consensus 60 ~~~i~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~ll~~~~~--~~~~pd~vI~D~~~~~~~~vA~~lgiP~v~ 136 (480)
T 2vch_A 60 PSSISSVFLPPVDLTDLSSS-TRIESRISLTVTRSNPELRKVFDSFVE--GGRLPTALVVDLFGTDAFDVAVEFHVPPYI 136 (480)
T ss_dssp CTTEEEEECCCCCCTTSCTT-CCHHHHHHHHHHTTHHHHHHHHHHHHH--TTCCCSEEEECTTCGGGHHHHHHTTCCEEE
T ss_pred CCCceEEEcCCCCCCCCCCc-hhHHHHHHHHHHhhhHHHHHHHHHhcc--CCCCCeEEEECCcchhHHHHHHHcCCCEEE
Confidence 46899999997632221111 122222222333444556666665532 2477 9999999999999999999999999
Q ss_pred EeCChhhhhhhhhcchhhhhh------------hccC-------Ccc-------hHHHHHHHHHhcccCCCcEEEecchH
Q 035856 83 VFVAMPYNGSAHIHTDLIHQF------------FINN-------CEE-------SLFSSMLSKLGGVLPQASAAVMNFYQ 136 (278)
Q Consensus 83 ~~~~~~~~~~~~~~~~~l~~~------------~~~~-------~~~-------~~~~~~~~~~~~~~~~~~~~l~nt~~ 136 (278)
+++++++....+++.+.+.+. ..|+ +.. ......+.+....+++++++++||++
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pg~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~nt~~ 216 (480)
T 2vch_A 137 FYPTTANVLSFFLHLPKLDETVSCEFRELTEPLMLPGCVPVAGKDFLDPAQDRKDDAYKWLLHNTKRYKEAEGILVNTFF 216 (480)
T ss_dssp EECSCHHHHHHHHHHHHHHHHCCSCGGGCSSCBCCTTCCCBCGGGSCGGGSCTTSHHHHHHHHHHHHGGGCSEEEESCCT
T ss_pred EECccHHHHHHHHHHHHHHhcCCCcccccCCcccCCCCCCCChHHCchhhhcCCchHHHHHHHHHHhcccCCEEEEcCHH
Confidence 999998766555443322210 0111 010 01223333444556778899999999
Q ss_pred hhhccchhhHHHhhc---CCeEEEecCCCCCCCCCCCCCC-CCcchhhhHhhhcCCCCC---------------------
Q 035856 137 ELYCSSQLTNDLNSK---VPSLLKVGFLTQPLPPPPLPPS-DSDETGYLQWLDRQKPKS--------------------- 191 (278)
Q Consensus 137 ~le~~~~~~~~~~~~---~~~v~~VG~~~~pl~~~~~~~~-~~~~~~~~~wld~~~~~s--------------------- 191 (278)
++| +.+...+++. .+++++|| |++....... ...+..|.+|||++++++
T Consensus 217 ele--~~~~~~l~~~~~~~~~v~~vG----pl~~~~~~~~~~~~~~~~~~wLd~~~~~~vvyvs~GS~~~~~~~~~~~~~ 290 (480)
T 2vch_A 217 ELE--PNAIKALQEPGLDKPPVYPVG----PLVNIGKQEAKQTEESECLKWLDNQPLGSVLYVSFGSGGTLTCEQLNELA 290 (480)
T ss_dssp TTS--HHHHHHHHSCCTTCCCEEECC----CCCCCSCSCC-----CHHHHHHHTSCTTCEEEEECTTTCCCCHHHHHHHH
T ss_pred HHh--HHHHHHHHhcccCCCcEEEEe----ccccccccccCccchhHHHHHhcCCCCCceEEEecccccCCCHHHHHHHH
Confidence 999 8777766542 46899999 9986432110 123457999999987654
Q ss_pred --------------CC----------------------CCC--------eEEe-cCcchhhhcccccccEEEeeCCchhH
Q 035856 192 --------------RT----------------------SGR--------GKIV-LQAPQTQVLGHFSIGVFVIHSGANSV 226 (278)
Q Consensus 192 --------------~~----------------------~~~--------~~v~-~w~pq~~iL~~~~v~~fitHgG~~s~ 226 (278)
+. ++| ++++ +|+||.+||+|++|++||||||||||
T Consensus 291 ~al~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~g~~v~~w~Pq~~vL~h~~v~~fvtHgG~~S~ 370 (480)
T 2vch_A 291 LGLADSEQRFLWVIRSPSGIANSSYFDSHSQTDPLTFLPPGFLERTKKRGFVIPFWAPQAQVLAHPSTGGFLTHCGWNST 370 (480)
T ss_dssp HHHHHTTCEEEEEECCCCSSTTTTTTCC--CSCGGGGSCTTHHHHTTTTEEEEESCCCHHHHHHSTTEEEEEECCCHHHH
T ss_pred HHHHhcCCcEEEEECCccccccccccccccccchhhhcCHHHHHHhCCCeEEEeCccCHHHHhCCCCcCeEEecccchhH
Confidence 11 112 2566 59999999999999999999999999
Q ss_pred HHHHHhCcceeeccccCChhHHHHHHHHHhcceEEecCC---CcCHHHHHhhhhC
Q 035856 227 CESIANGVLMICRPFYGDHRMNARMVEEVWGIGVKVEGI---LLTKSGVLQSLDL 278 (278)
Q Consensus 227 ~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l~~~---~~~~~~l~~~i~~ 278 (278)
+||+++|||||+||+++||+.||+++++.||+|+.++.. .+++++|+++|++
T Consensus 371 ~Eal~~GvP~i~~P~~~DQ~~na~~l~~~~G~g~~l~~~~~~~~~~~~l~~av~~ 425 (480)
T 2vch_A 371 LESVVSGIPLIAWPLYAEQKMNAVLLSEDIRAALRPRAGDDGLVRREEVARVVKG 425 (480)
T ss_dssp HHHHHHTCCEEECCCSTTHHHHHHHHHHTTCCEECCCCCTTSCCCHHHHHHHHHH
T ss_pred HHHHHcCCCEEeccccccchHHHHHHHHHhCeEEEeecccCCccCHHHHHHHHHH
Confidence 999999999999999999999999986556999999764 7999999999863
No 5
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=100.00 E-value=9.2e-40 Score=297.64 Aligned_cols=263 Identities=23% Similarity=0.306 Sum_probs=186.6
Q ss_pred CCceEEecCCC-CCCCCCCCCCCcHHHHHHHHHHchHHHHHHHHHHHHcCCCCccEEEeCCCchhHHHHHHHcCCCeEeE
Q 035856 5 DNIRVYDVEDG-VPMKYASTESNPLEAVELFVKATPENFKKGLDAAVSKTGRKISCFLTDAFLTFSGEMARDMHIPWFPV 83 (278)
Q Consensus 5 ~~i~~~~i~~g-lp~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~d~vI~D~~~~~~~~vA~~lgIP~v~~ 83 (278)
++|+|+++|++ +|+ .+.. ......+........+.+++.++++ .+.++||||+|.++.|+..+|+++|||++.+
T Consensus 67 ~~i~~~~lp~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~ll~~~---~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~ 141 (463)
T 2acv_A 67 PQIQLIDLPEVEPPP-QELL-KSPEFYILTFLESLIPHVKATIKTI---LSNKVVGLVLDFFCVSMIDVGNEFGIPSYLF 141 (463)
T ss_dssp TTEEEEECCCCCCCC-GGGG-GSHHHHHHHHHHHTHHHHHHHHHHH---CCTTEEEEEEEGGGGGGHHHHHHTTCCEEEE
T ss_pred CCceEEECCCCCCCc-cccc-CCccHHHHHHHHhhhHHHHHHHHhc---cCCCCeEEEECCcchhHHHHHHHcCCCEEEE
Confidence 58999999987 443 2211 1111112222233444455555543 2358999999999999999999999999999
Q ss_pred eCChhhhhhhhhcchhhh-------------hhhccCC--------cch------HHHHHHHHHhcccCCCcEEEecchH
Q 035856 84 FVAMPYNGSAHIHTDLIH-------------QFFINNC--------EES------LFSSMLSKLGGVLPQASAAVMNFYQ 136 (278)
Q Consensus 84 ~~~~~~~~~~~~~~~~l~-------------~~~~~~~--------~~~------~~~~~~~~~~~~~~~~~~~l~nt~~ 136 (278)
++++++....+++.+.+. ....|+- ... .+.....+....+++++++++|||+
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~nt~~ 221 (463)
T 2acv_A 142 LTSNVGFLSLMLSLKNRQIEEVFDDSDRDHQLLNIPGISNQVPSNVLPDACFNKDGGYIAYYKLAERFRDTKGIIVNTFS 221 (463)
T ss_dssp ESSCHHHHHHHHHGGGSCTTCCCCCSSGGGCEECCTTCSSCEEGGGSCHHHHCTTTHHHHHHHHHHHHTTSSEEEESCCH
T ss_pred eCchHHHHHHHHHHHhhcccCCCCCccccCceeECCCCCCCCChHHCchhhcCCchHHHHHHHHHHhcccCCEEEECCHH
Confidence 999887765554332210 0001211 111 1122233334456788899999999
Q ss_pred hhhccchhhHHHhhc---CCeEEEecCCCCCCCCCCC-CCCC---CcchhhhHhhhcCCCCC------------------
Q 035856 137 ELYCSSQLTNDLNSK---VPSLLKVGFLTQPLPPPPL-PPSD---SDETGYLQWLDRQKPKS------------------ 191 (278)
Q Consensus 137 ~le~~~~~~~~~~~~---~~~v~~VG~~~~pl~~~~~-~~~~---~~~~~~~~wld~~~~~s------------------ 191 (278)
+|| +.+.+.+++. .+++++|| |++.... .... ..+..|.+|||.+++++
T Consensus 222 ele--~~~~~~l~~~~~p~~~v~~vG----pl~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~ 295 (463)
T 2acv_A 222 DLE--QSSIDALYDHDEKIPPIYAVG----PLLDLKGQPNPKLDQAQHDLILKWLDEQPDKSVVFLCFGSMGVSFGPSQI 295 (463)
T ss_dssp HHH--HHHHHHHHHHCTTSCCEEECC----CCCCSSCCCBTTBCHHHHHHHHHHHHTSCTTCEEEEECCSSCCCCCHHHH
T ss_pred HHh--HHHHHHHHhccccCCcEEEeC----CCcccccccccccccccchhHHHHHhcCCCCceEEEEeccccccCCHHHH
Confidence 999 8887776653 46899999 9986432 1001 12357999999886543
Q ss_pred ------------------C-----C----------CCCeEEecCcchhhhcccccccEEEeeCCchhHHHHHHhCcceee
Q 035856 192 ------------------R-----T----------SGRGKIVLQAPQTQVLGHFSIGVFVIHSGANSVCESIANGVLMIC 238 (278)
Q Consensus 192 ------------------~-----~----------~~~~~v~~w~pq~~iL~~~~v~~fitHgG~~s~~eal~~GvP~l~ 238 (278)
+ . ++|+++++|+||.++|+|+++++||||||||||+||+++|||||+
T Consensus 296 ~~~~~~l~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~s~~Eal~~GvP~i~ 375 (463)
T 2acv_A 296 REIALGLKHSGVRFLWSNSAEKKVFPEGFLEWMELEGKGMICGWAPQVEVLAHKAIGGFVSHCGWNSILESMWFGVPILT 375 (463)
T ss_dssp HHHHHHHHHHTCEEEEECCCCGGGSCTTHHHHHHHHCSEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHhCCCcEEEEECCCcccCChhHHHhhccCCCEEEEccCCHHHHhCCCccCeEEecCCchhHHHHHHcCCCeee
Confidence 1 1 346788899999999999999999999999999999999999999
Q ss_pred ccccCChhHHHHHHHHHhcceEEe-c---CC--CcCHHHHHhhhhC
Q 035856 239 RPFYGDHRMNARMVEEVWGIGVKV-E---GI--LLTKSGVLQSLDL 278 (278)
Q Consensus 239 ~P~~~DQ~~na~~~~~~~g~G~~l-~---~~--~~~~~~l~~~i~~ 278 (278)
+|+++||+.||+++++.||+|+.+ + .+ .+++++|+++|++
T Consensus 376 ~P~~~dQ~~Na~~lv~~~g~g~~l~~~~~~~~~~~~~~~l~~ai~~ 421 (463)
T 2acv_A 376 WPIYAEQQLNAFRLVKEWGVGLGLRVDYRKGSDVVAAEEIEKGLKD 421 (463)
T ss_dssp CCCSTTHHHHHHHHHHTSCCEEESCSSCCTTCCCCCHHHHHHHHHH
T ss_pred ccchhhhHHHHHHHHHHcCeEEEEecccCCCCccccHHHHHHHHHH
Confidence 999999999999964446999999 3 35 6899999999863
No 6
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=99.95 E-value=8.3e-27 Score=209.83 Aligned_cols=256 Identities=16% Similarity=0.147 Sum_probs=158.1
Q ss_pred CceEEecCCCCCCCCCC---CCCCcHHHHHHHHHHchHHHHHHHHHHHHcCCCCccEEEeCCCchhHHHHHHHcCCCeEe
Q 035856 6 NIRVYDVEDGVPMKYAS---TESNPLEAVELFVKATPENFKKGLDAAVSKTGRKISCFLTDAFLTFSGEMARDMHIPWFP 82 (278)
Q Consensus 6 ~i~~~~i~~glp~~~~~---~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~d~vI~D~~~~~~~~vA~~lgIP~v~ 82 (278)
+++|+++++++|.+... ...+....+..+.+.. ..+.+.+.+++++ .+|||||+|.++.|+..+|+++|||++.
T Consensus 59 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~l~~--~~pD~VI~d~~~~~~~~~A~~lgIP~v~ 135 (424)
T 2iya_A 59 GATPVVYDSILPKESNPEESWPEDQESAMGLFLDEA-VRVLPQLEDAYAD--DRPDLIVYDIASWPAPVLGRKWDIPFVQ 135 (424)
T ss_dssp TCEEEECCCCSCCTTCTTCCCCSSHHHHHHHHHHHH-HHHHHHHHHHTTT--SCCSEEEEETTCTHHHHHHHHHTCCEEE
T ss_pred CCEEEecCccccccccchhhcchhHHHHHHHHHHHH-HHHHHHHHHHHhc--cCCCEEEEcCcccHHHHHHHhcCCCEEE
Confidence 68899998877754321 1122233333333322 2233445555544 4899999999989999999999999999
Q ss_pred EeCChhhhhhhh--h--cchhhh---------------hhhccCCc-chHHHHHHHHHhc----------ccCCCcEEEe
Q 035856 83 VFVAMPYNGSAH--I--HTDLIH---------------QFFINNCE-ESLFSSMLSKLGG----------VLPQASAAVM 132 (278)
Q Consensus 83 ~~~~~~~~~~~~--~--~~~~l~---------------~~~~~~~~-~~~~~~~~~~~~~----------~~~~~~~~l~ 132 (278)
+++.++...... . +...+. ........ ...+.+...+... ....++.+++
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~ 215 (424)
T 2iya_A 136 LSPTFVAYEGFEEDVPAVQDPTADRGEEAAAPAGTGDAEEGAEAEDGLVRFFTRLSAFLEEHGVDTPATEFLIAPNRCIV 215 (424)
T ss_dssp EESSCCCCTTHHHHSGGGSCCCC---------------------HHHHHHHHHHHHHHHHHTTCCSCHHHHHHCCSSEEE
T ss_pred EecccccccccccccccccccccccccccccccccccchhhhccchhHHHHHHHHHHHHHHcCCCCCHHHhccCCCcEEE
Confidence 998764221110 0 000000 00000000 0001111111111 1114678899
Q ss_pred cchHhhhccchhhHHHhhcCCeEEEecCCCCCCCCCCC------C-CCC------------Cc-ch---hhhHhhhcCCC
Q 035856 133 NFYQELYCSSQLTNDLNSKVPSLLKVGFLTQPLPPPPL------P-PSD------------SD-ET---GYLQWLDRQKP 189 (278)
Q Consensus 133 nt~~~le~~~~~~~~~~~~~~~v~~VG~~~~pl~~~~~------~-~~~------------~~-~~---~~~~wld~~~~ 189 (278)
|+.++++ ... ....+++++|| |+..... . ... .. .. .+++-+.+.+.
T Consensus 216 ~~~~~l~--~~~----~~~~~~~~~vG----p~~~~~~~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~ 285 (424)
T 2iya_A 216 ALPRTFQ--IKG----DTVGDNYTFVG----PTYGDRSHQGTWEGPGDGRPVLLIALGSAFTDHLDFYRTCLSAVDGLDW 285 (424)
T ss_dssp SSCTTTS--TTG----GGCCTTEEECC----CCCCCCGGGCCCCCCCSSCCEEEEECCSSSCCCHHHHHHHHHHHTTCSS
T ss_pred EcchhhC--CCc----cCCCCCEEEeC----CCCCCcccCCCCCccCCCCCEEEEEcCCCCcchHHHHHHHHHHHhcCCc
Confidence 9998888 331 12225788999 8653211 0 000 00 00 11122211100
Q ss_pred C--------C------CCCCCeEEecCcchhhhcccccccEEEeeCCchhHHHHHHhCcceeeccccCChhHHHHHHHHH
Q 035856 190 K--------S------RTSGRGKIVLQAPQTQVLGHFSIGVFVIHSGANSVCESIANGVLMICRPFYGDHRMNARMVEEV 255 (278)
Q Consensus 190 ~--------s------~~~~~~~v~~w~pq~~iL~~~~v~~fitHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~ 255 (278)
+ . ..++|..+.+|+||.++|+|++ +||||||+||++||+++|||+|++|...||+.||+++++.
T Consensus 286 ~~~~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~d--~~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~ 363 (424)
T 2iya_A 286 HVVLSVGRFVDPADLGEVPPNVEVHQWVPQLDILTKAS--AFITHAGMGSTMEALSNAVPMVAVPQIAEQTMNAERIVEL 363 (424)
T ss_dssp EEEEECCTTSCGGGGCSCCTTEEEESSCCHHHHHTTCS--EEEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHT
T ss_pred EEEEEECCcCChHHhccCCCCeEEecCCCHHHHHhhCC--EEEECCchhHHHHHHHcCCCEEEecCccchHHHHHHHHHC
Confidence 0 0 2356888899999999999999 9999999999999999999999999999999999999986
Q ss_pred hcceEEecCCCcCHHHHHhhhh
Q 035856 256 WGIGVKVEGILLTKSGVLQSLD 277 (278)
Q Consensus 256 ~g~G~~l~~~~~~~~~l~~~i~ 277 (278)
|+|+.++.+.+++++|.++|+
T Consensus 364 -g~g~~~~~~~~~~~~l~~~i~ 384 (424)
T 2iya_A 364 -GLGRHIPRDQVTAEKLREAVL 384 (424)
T ss_dssp -TSEEECCGGGCCHHHHHHHHH
T ss_pred -CCEEEcCcCCCCHHHHHHHHH
Confidence 999999877789999998876
No 7
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=99.94 E-value=9.1e-26 Score=202.65 Aligned_cols=250 Identities=16% Similarity=0.176 Sum_probs=155.9
Q ss_pred CCceEEecCCCCCCCCCCCCCCcHHHHHHHHHHchHHHHHHHHHHHHcCCCCccEEEeCC-Cchh--HHHHHHHcCCCeE
Q 035856 5 DNIRVYDVEDGVPMKYASTESNPLEAVELFVKATPENFKKGLDAAVSKTGRKISCFLTDA-FLTF--SGEMARDMHIPWF 81 (278)
Q Consensus 5 ~~i~~~~i~~glp~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~d~vI~D~-~~~~--~~~vA~~lgIP~v 81 (278)
.+++|+++++...+..+.........+..+ ....+...++++.+. ..+|||||+|. +..| +..+|+++|||++
T Consensus 46 ~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~-~~~pD~vi~d~~~~~~~~~~~~A~~lgiP~v 121 (415)
T 1iir_A 46 VGVPHVPVGPSARAPIQRAKPLTAEDVRRF---TTEAIATQFDEIPAA-AEGCAAVVTTGLLAAAIGVRSVAEKLGIPYF 121 (415)
T ss_dssp TTCCEEECCC-------CCSCCCHHHHHHH---HHHHHHHHHHHHHHH-TTTCSEEEEESCHHHHHHHHHHHHHHTCCEE
T ss_pred cCCeeeeCCCCHHHHhhcccccchHHHHHH---HHHHHHHHHHHHHHH-hcCCCEEEECChhHhHhhHHHHHHHhCCCEE
Confidence 378899988654322111111111112122 222344556665542 25999999998 6788 9999999999999
Q ss_pred eEeCChhhhhhhhhcc--------hh-hhhhhccCC-cchH----HHHHHHHHhcc--c----------CCCcEEEecch
Q 035856 82 PVFVAMPYNGSAHIHT--------DL-IHQFFINNC-EESL----FSSMLSKLGGV--L----------PQASAAVMNFY 135 (278)
Q Consensus 82 ~~~~~~~~~~~~~~~~--------~~-l~~~~~~~~-~~~~----~~~~~~~~~~~--~----------~~~~~~l~nt~ 135 (278)
.+++.+++....++.. .. ..... ... .... +.......... + ... .+++|+.
T Consensus 122 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~n~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~l~~~~ 199 (415)
T 1iir_A 122 YAFHCPSYVPSPYYPPPPLGEPSTQDTIDIPA-QWERNNQSAYQRYGGLLNSHRDAIGLPPVEDIFTFGYTD-HPWVAAD 199 (415)
T ss_dssp EEESSGGGSCCSSSCCCC---------CHHHH-HHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHCS-SCEECSC
T ss_pred EEecCCCcCCCcccCCccCCccccchHHHHHH-HHHHHHHHHHHHhHHHHHHHHHHcCCCCCCccccccCCC-CEEEeeC
Confidence 9988774432211100 00 00000 000 0000 00001111100 1 122 5788998
Q ss_pred HhhhccchhhHHHhhcCCeEEEecCCCCCCCCCCCCCCCCcchhhhHhhhcCCCCC------------------------
Q 035856 136 QELYCSSQLTNDLNSKVPSLLKVGFLTQPLPPPPLPPSDSDETGYLQWLDRQKPKS------------------------ 191 (278)
Q Consensus 136 ~~le~~~~~~~~~~~~~~~v~~VG~~~~pl~~~~~~~~~~~~~~~~~wld~~~~~s------------------------ 191 (278)
++++ +. .+... ++++|| |+..... ...+..|.+||+.+++..
T Consensus 200 ~~l~--~~----~~~~~-~~~~vG----~~~~~~~---~~~~~~~~~~l~~~~~~v~v~~Gs~~~~~~~~~~~~~al~~~ 265 (415)
T 1iir_A 200 PVLA--PL----QPTDL-DAVQTG----AWILPDE---RPLSPELAAFLDAGPPPVYLGFGSLGAPADAVRVAIDAIRAH 265 (415)
T ss_dssp TTTS--CC----CCCSS-CCEECC----CCCCCCC---CCCCHHHHHHHHTSSCCEEEECC---CCHHHHHHHHHHHHHT
T ss_pred hhhc--CC----CcccC-CeEeeC----CCccCcc---cCCCHHHHHHHhhCCCeEEEeCCCCCCcHHHHHHHHHHHHHC
Confidence 8888 31 12222 788999 8875422 122345778887654321
Q ss_pred ----------------CCCCCeEEecCcchhhhcccccccEEEeeCCchhHHHHHHhCcceeeccccCChhHHHHHHHHH
Q 035856 192 ----------------RTSGRGKIVLQAPQTQVLGHFSIGVFVIHSGANSVCESIANGVLMICRPFYGDHRMNARMVEEV 255 (278)
Q Consensus 192 ----------------~~~~~~~v~~w~pq~~iL~~~~v~~fitHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~ 255 (278)
..++|..+.+|+||.++|++++ +||||||+||++||+++|||+|++|.++||..||+++++.
T Consensus 266 ~~~~v~~~g~~~~~~~~~~~~v~~~~~~~~~~~l~~~d--~~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~ 343 (415)
T 1iir_A 266 GRRVILSRGWADLVLPDDGADCFAIGEVNHQVLFGRVA--AVIHHGGAGTTHVAARAGAPQILLPQMADQPYYAGRVAEL 343 (415)
T ss_dssp TCCEEECTTCTTCCCSSCGGGEEECSSCCHHHHGGGSS--EEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHH
T ss_pred CCeEEEEeCCCcccccCCCCCEEEeCcCChHHHHhhCC--EEEeCCChhHHHHHHHcCCCEEECCCCCccHHHHHHHHHC
Confidence 0134667789999999997777 9999999999999999999999999999999999999887
Q ss_pred hcceEEecCCCcCHHHHHhhhh
Q 035856 256 WGIGVKVEGILLTKSGVLQSLD 277 (278)
Q Consensus 256 ~g~G~~l~~~~~~~~~l~~~i~ 277 (278)
|+|+.++.+.++.++|.++|+
T Consensus 344 -g~g~~~~~~~~~~~~l~~~i~ 364 (415)
T 1iir_A 344 -GVGVAHDGPIPTFDSLSAALA 364 (415)
T ss_dssp -TSEEECSSSSCCHHHHHHHHH
T ss_pred -CCcccCCcCCCCHHHHHHHHH
Confidence 999999877889999999886
No 8
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=99.93 E-value=3.5e-25 Score=197.34 Aligned_cols=83 Identities=20% Similarity=0.275 Sum_probs=75.0
Q ss_pred CCCCCeEEecCcchhhhcccccccEEEeeCCchhHHHHHHhCcceeeccccCChhHHHHHHHHHhcceEEecCCCcCHHH
Q 035856 192 RTSGRGKIVLQAPQTQVLGHFSIGVFVIHSGANSVCESIANGVLMICRPFYGDHRMNARMVEEVWGIGVKVEGILLTKSG 271 (278)
Q Consensus 192 ~~~~~~~v~~w~pq~~iL~~~~v~~fitHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~~~~ 271 (278)
..++|.++.+|+||.++|+|++ +|||||||||++||+++|||+|++|+++||+.||+++++. |+|+.++...++++.
T Consensus 285 ~~~~~v~~~~~~p~~~lL~~~~--~~v~h~G~~s~~Eal~~GvP~v~~P~~~dQ~~na~~v~~~-G~g~~l~~~~~~~~a 361 (400)
T 4amg_A 285 ELPANVRVVEWIPLGALLETCD--AIIHHGGSGTLLTALAAGVPQCVIPHGSYQDTNRDVLTGL-GIGFDAEAGSLGAEQ 361 (400)
T ss_dssp CCCTTEEEECCCCHHHHHTTCS--EEEECCCHHHHHHHHHHTCCEEECCC---CHHHHHHHHHH-TSEEECCTTTCSHHH
T ss_pred cCCCCEEEEeecCHHHHhhhhh--heeccCCccHHHHHHHhCCCEEEecCcccHHHHHHHHHHC-CCEEEcCCCCchHHH
Confidence 4578999999999999999999 9999999999999999999999999999999999999998 999999988899999
Q ss_pred HHhhhh
Q 035856 272 VLQSLD 277 (278)
Q Consensus 272 l~~~i~ 277 (278)
|++.++
T Consensus 362 l~~lL~ 367 (400)
T 4amg_A 362 CRRLLD 367 (400)
T ss_dssp HHHHHH
T ss_pred HHHHHc
Confidence 887664
No 9
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=99.93 E-value=1e-24 Score=195.85 Aligned_cols=215 Identities=14% Similarity=0.135 Sum_probs=143.5
Q ss_pred HHHHHHHHHcCCCCccEEEeCC-Cchh--HHHHHHHcCCCeEeEeCChhhhhhhhhc------c-hh-hhhhhccCCcc-
Q 035856 43 KKGLDAAVSKTGRKISCFLTDA-FLTF--SGEMARDMHIPWFPVFVAMPYNGSAHIH------T-DL-IHQFFINNCEE- 110 (278)
Q Consensus 43 ~~~l~~l~~~~~~~~d~vI~D~-~~~~--~~~vA~~lgIP~v~~~~~~~~~~~~~~~------~-~~-l~~~~~~~~~~- 110 (278)
...++.+.+. ..+|||||+|. +.+| +..+|+++|||++.+++.+.+....++. . .. ..+........
T Consensus 82 ~~~~~~l~~~-~~~pD~vi~d~~~~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~p~~~~~~~~~~r~~n~~~~~~~~~ 160 (416)
T 1rrv_A 82 EMQFDAVPGA-AEGCAAVVAVGDLAAATGVRSVAEKLGLPFFYSVPSPVYLASPHLPPAYDEPTTPGVTDIRVLWEERAA 160 (416)
T ss_dssp HHHHHHHHHH-TTTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSCCSSSCCCBCSCCCTTCCCHHHHHHHHHH
T ss_pred HHHHHHHHHH-hcCCCEEEEcCchHHHHHHHHHHHHcCCCEEEEeCCCCCCCCcccCCCCCCCCCchHHHHHHHHHHHHH
Confidence 4445554422 25899999996 4566 8999999999999998776432211110 0 00 00000000000
Q ss_pred -------hHHHHHHHHHh--------cccCCCcEEEecchHhhhccchhhHHHhhcCCeEEEecCCCCCCCCCCCCCCCC
Q 035856 111 -------SLFSSMLSKLG--------GVLPQASAAVMNFYQELYCSSQLTNDLNSKVPSLLKVGFLTQPLPPPPLPPSDS 175 (278)
Q Consensus 111 -------~~~~~~~~~~~--------~~~~~~~~~l~nt~~~le~~~~~~~~~~~~~~~v~~VG~~~~pl~~~~~~~~~~ 175 (278)
........... +..... .+++|+.++++ ++ +... ++++|| |+...... .
T Consensus 161 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~l~~~~~~l~--~~-----~~~~-~~~~vG----~~~~~~~~---~ 224 (416)
T 1rrv_A 161 RFADRYGPTLNRRRAEIGLPPVEDVFGYGHGE-RPLLAADPVLA--PL-----QPDV-DAVQTG----AWLLSDER---P 224 (416)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCCSCHHHHTTCS-SCEECSCTTTS--CC-----CSSC-CCEECC----CCCCCCCC---C
T ss_pred HHHHHhHHHHHHHHHHcCCCCCCchhhhccCC-CeEEccCcccc--CC-----CCCC-CeeeEC----CCccCccC---C
Confidence 00001111110 011223 68899988888 32 1122 788999 98764221 2
Q ss_pred cchhhhHhhhcCCCCC------------------------------------------CCCCCeEEecCcchhhhccccc
Q 035856 176 DETGYLQWLDRQKPKS------------------------------------------RTSGRGKIVLQAPQTQVLGHFS 213 (278)
Q Consensus 176 ~~~~~~~wld~~~~~s------------------------------------------~~~~~~~v~~w~pq~~iL~~~~ 213 (278)
.+..+.+||+++++.. ..++|..+.+|+||.++|++++
T Consensus 225 ~~~~~~~~l~~~~~~v~v~~Gs~~~~~~~~~~~~~~~al~~~~~~~v~~~g~~~~~~~~~~~~v~~~~~~~~~~ll~~~d 304 (416)
T 1rrv_A 225 LPPELEAFLAAGSPPVHIGFGSSSGRGIADAAKVAVEAIRAQGRRVILSRGWTELVLPDDRDDCFAIDEVNFQALFRRVA 304 (416)
T ss_dssp CCHHHHHHHHSSSCCEEECCTTCCSHHHHHHHHHHHHHHHHTTCCEEEECTTTTCCCSCCCTTEEEESSCCHHHHGGGSS
T ss_pred CCHHHHHHHhcCCCeEEEecCCCCccChHHHHHHHHHHHHHCCCeEEEEeCCccccccCCCCCEEEeccCChHHHhccCC
Confidence 2345778887654321 1245778889999999998877
Q ss_pred ccEEEeeCCchhHHHHHHhCcceeeccccCChhHHHHHHHHHhcceEEecCCCcCHHHHHhhhh
Q 035856 214 IGVFVIHSGANSVCESIANGVLMICRPFYGDHRMNARMVEEVWGIGVKVEGILLTKSGVLQSLD 277 (278)
Q Consensus 214 v~~fitHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~~~~l~~~i~ 277 (278)
+||||||+||++||+++|||+|++|.++||..||+++++. |+|+.++...++.++|.++|+
T Consensus 305 --~~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~-g~g~~~~~~~~~~~~l~~~i~ 365 (416)
T 1rrv_A 305 --AVIHHGSAGTEHVATRAGVPQLVIPRNTDQPYFAGRVAAL-GIGVAHDGPTPTFESLSAALT 365 (416)
T ss_dssp --EEEECCCHHHHHHHHHHTCCEEECCCSBTHHHHHHHHHHH-TSEEECSSSCCCHHHHHHHHH
T ss_pred --EEEecCChhHHHHHHHcCCCEEEccCCCCcHHHHHHHHHC-CCccCCCCCCCCHHHHHHHHH
Confidence 9999999999999999999999999999999999999997 999999877789999999886
No 10
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=99.89 E-value=4.7e-22 Score=177.96 Aligned_cols=82 Identities=21% Similarity=0.293 Sum_probs=77.3
Q ss_pred CCCCeEEecCcchhhhcccccccEEEeeCCchhHHHHHHhCcceeeccccCChhHHHHHHHHHhcceEEecCCCcCHHHH
Q 035856 193 TSGRGKIVLQAPQTQVLGHFSIGVFVIHSGANSVCESIANGVLMICRPFYGDHRMNARMVEEVWGIGVKVEGILLTKSGV 272 (278)
Q Consensus 193 ~~~~~~v~~w~pq~~iL~~~~v~~fitHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~~~~l 272 (278)
.++|..+.+|+||.++|++++ +||||||+||+.|++++|+|+|++|+++||+.||+++++. |+|+.++.+.++.++|
T Consensus 266 ~~~~v~~~~~~~~~~ll~~~d--~~v~~gG~~t~~Eal~~GvP~v~~p~~~dQ~~na~~~~~~-G~g~~l~~~~~~~~~l 342 (404)
T 3h4t_A 266 EGDDCLVVGEVNHQVLFGRVA--AVVHHGGAGTTTAVTRAGAPQVVVPQKADQPYYAGRVADL-GVGVAHDGPTPTVESL 342 (404)
T ss_dssp CCTTEEEESSCCHHHHGGGSS--EEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHH-TSEEECSSSSCCHHHH
T ss_pred CCCCEEEecCCCHHHHHhhCc--EEEECCcHHHHHHHHHcCCCEEEcCCcccHHHHHHHHHHC-CCEeccCcCCCCHHHH
Confidence 367888899999999999988 9999999999999999999999999999999999999998 9999998888899999
Q ss_pred Hhhhh
Q 035856 273 LQSLD 277 (278)
Q Consensus 273 ~~~i~ 277 (278)
.++|+
T Consensus 343 ~~ai~ 347 (404)
T 3h4t_A 343 SAALA 347 (404)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98886
No 11
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=99.88 E-value=1.7e-21 Score=175.28 Aligned_cols=257 Identities=16% Similarity=0.101 Sum_probs=152.7
Q ss_pred CCceEEecCCCCCCCCCCC---CCCcHHHHHHHHHHchHHHHHHHHHHHHcCCCCccEEEeCCCchhHHHHHHHcCCCeE
Q 035856 5 DNIRVYDVEDGVPMKYAST---ESNPLEAVELFVKATPENFKKGLDAAVSKTGRKISCFLTDAFLTFSGEMARDMHIPWF 81 (278)
Q Consensus 5 ~~i~~~~i~~glp~~~~~~---~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~d~vI~D~~~~~~~~vA~~lgIP~v 81 (278)
.+++|++++..++.+.... ..+....+..+...... +...+.+++++ .+||+||+|.+.+|+..+|+++|||++
T Consensus 53 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~l~~--~~pD~Vi~d~~~~~~~~~A~~~giP~v 129 (430)
T 2iyf_A 53 TGPRPVLYHSTLPGPDADPEAWGSTLLDNVEPFLNDAIQ-ALPQLADAYAD--DIPDLVLHDITSYPARVLARRWGVPAV 129 (430)
T ss_dssp TSCEEEECCCCSCCTTSCGGGGCSSHHHHHHHHHHHHHH-HHHHHHHHHTT--SCCSEEEEETTCHHHHHHHHHHTCCEE
T ss_pred CCCEEEEcCCcCccccccccccchhhHHHHHHHHHHHHH-HHHHHHHHhhc--cCCCEEEECCccHHHHHHHHHcCCCEE
Confidence 4688888887665443211 11222233333222222 23334555554 489999999888899999999999999
Q ss_pred eEeCChhhhhhhhhcc-hhhhhhhc--cC--CcchHHHHHHHHHh------cccCCCcEEEecchHhhhccchhhHHHhh
Q 035856 82 PVFVAMPYNGSAHIHT-DLIHQFFI--NN--CEESLFSSMLSKLG------GVLPQASAAVMNFYQELYCSSQLTNDLNS 150 (278)
Q Consensus 82 ~~~~~~~~~~~~~~~~-~~l~~~~~--~~--~~~~~~~~~~~~~~------~~~~~~~~~l~nt~~~le~~~~~~~~~~~ 150 (278)
.+++.+.......... ..+.+... ++ .....+.....+.. .....++.+++++..+++ ... +.
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~--~~~----~~ 203 (430)
T 2iyf_A 130 SLSPNLVAWKGYEEEVAEPMWREPRQTERGRAYYARFEAWLKENGITEHPDTFASHPPRSLVLIPKALQ--PHA----DR 203 (430)
T ss_dssp EEESSCCCCTTHHHHTHHHHHHHHHHSHHHHHHHHHHHHHHHHTTCCSCHHHHHHCCSSEEECSCGGGS--TTG----GG
T ss_pred EEecccccccccccccccchhhhhccchHHHHHHHHHHHHHHHhCCCCCHHHHhcCCCcEEEeCcHHhC--CCc----cc
Confidence 9987654111000000 00000000 00 00000111111110 011146788999988887 321 11
Q ss_pred cCCe-EEEecCCCCCCCCCCC-----C--CCC------------C-cch---hhhHhhhcCCC-CC--------------
Q 035856 151 KVPS-LLKVGFLTQPLPPPPL-----P--PSD------------S-DET---GYLQWLDRQKP-KS-------------- 191 (278)
Q Consensus 151 ~~~~-v~~VG~~~~pl~~~~~-----~--~~~------------~-~~~---~~~~wld~~~~-~s-------------- 191 (278)
..++ +++|| |...... . ... . ... .+.+.+.+.+. ..
T Consensus 204 ~~~~~v~~vG----~~~~~~~~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~l~~~~~~~~~~~~G~~~~~~~l~ 279 (430)
T 2iyf_A 204 VDEDVYTFVG----ACQGDRAEEGGWQRPAGAEKVVLVSLGSAFTKQPAFYRECVRAFGNLPGWHLVLQIGRKVTPAELG 279 (430)
T ss_dssp SCTTTEEECC----CCC-----CCCCCCCTTCSEEEEEECTTTCC-CHHHHHHHHHHHTTCTTEEEEEECC---CGGGGC
T ss_pred CCCccEEEeC----CcCCCCCCCCCCccccCCCCeEEEEcCCCCCCcHHHHHHHHHHHhcCCCeEEEEEeCCCCChHHhc
Confidence 2245 88888 7542110 0 000 0 000 11122222111 00
Q ss_pred CCCCCeEEecCcchhhhcccccccEEEeeCCchhHHHHHHhCcceeeccccCChhHHHHHHHHHhcceEEecCCCcCHHH
Q 035856 192 RTSGRGKIVLQAPQTQVLGHFSIGVFVIHSGANSVCESIANGVLMICRPFYGDHRMNARMVEEVWGIGVKVEGILLTKSG 271 (278)
Q Consensus 192 ~~~~~~~v~~w~pq~~iL~~~~v~~fitHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~~~~ 271 (278)
..++|..+.+|+||.++|++++ +||+|||+||++||+++|+|+|++|..+||..|++++++. |+|+.+..+.++.++
T Consensus 280 ~~~~~v~~~~~~~~~~~l~~ad--~~v~~~G~~t~~Ea~~~G~P~i~~p~~~~q~~~a~~~~~~-g~g~~~~~~~~~~~~ 356 (430)
T 2iyf_A 280 ELPDNVEVHDWVPQLAILRQAD--LFVTHAGAGGSQEGLATATPMIAVPQAVDQFGNADMLQGL-GVARKLATEEATADL 356 (430)
T ss_dssp SCCTTEEEESSCCHHHHHTTCS--EEEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHT-TSEEECCCC-CCHHH
T ss_pred cCCCCeEEEecCCHHHHhhccC--EEEECCCccHHHHHHHhCCCEEECCCccchHHHHHHHHHc-CCEEEcCCCCCCHHH
Confidence 2356788889999999999999 8999999999999999999999999999999999999997 999999877789999
Q ss_pred HHhhhh
Q 035856 272 VLQSLD 277 (278)
Q Consensus 272 l~~~i~ 277 (278)
|.++|+
T Consensus 357 l~~~i~ 362 (430)
T 2iyf_A 357 LRETAL 362 (430)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 998875
No 12
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=99.87 E-value=3.3e-21 Score=172.53 Aligned_cols=255 Identities=15% Similarity=0.100 Sum_probs=150.1
Q ss_pred CCceEEecCCCCCCCCC---CCCCCcHHHHHH-HHHHchHHHHHHHHHHHHcCCCCccEEEeC-CCchhHHHHHHHcCCC
Q 035856 5 DNIRVYDVEDGVPMKYA---STESNPLEAVEL-FVKATPENFKKGLDAAVSKTGRKISCFLTD-AFLTFSGEMARDMHIP 79 (278)
Q Consensus 5 ~~i~~~~i~~glp~~~~---~~~~~~~~~~~~-~~~~~~~~l~~~l~~l~~~~~~~~d~vI~D-~~~~~~~~vA~~lgIP 79 (278)
.+++|+.++..++.... ....++...+.. +.+.....+ ..+.+++++ .+||+||+| ....++..+|+++|||
T Consensus 66 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~l~~--~~PDlVi~d~~~~~~~~~aA~~~giP 142 (415)
T 3rsc_A 66 AGATVVPYQSEIIDADAAEVFGSDDLGVRPHLMYLRENVSVL-RATAEALDG--DVPDLVLYDDFPFIAGQLLAARWRRP 142 (415)
T ss_dssp TTCEEEECCCSTTTCCHHHHHHSSSSCHHHHHHHHHHHHHHH-HHHHHHHSS--SCCSEEEEESTTHHHHHHHHHHTTCC
T ss_pred cCCEEEeccccccccccchhhccccHHHHHHHHHHHHHHHHH-HHHHHHHhc--cCCCEEEECchhhhHHHHHHHHhCCC
Confidence 36788888755543211 011222233333 333332323 334455554 489999999 8888999999999999
Q ss_pred eEeEeCChhhhhhhhhcchhhhhhhccCC--cc----hHHHHHHHHHhc------ccCC-CcEEEecchHhhhccchhhH
Q 035856 80 WFPVFVAMPYNGSAHIHTDLIHQFFINNC--EE----SLFSSMLSKLGG------VLPQ-ASAAVMNFYQELYCSSQLTN 146 (278)
Q Consensus 80 ~v~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~----~~~~~~~~~~~~------~~~~-~~~~l~nt~~~le~~~~~~~ 146 (278)
++.+.+........ .....+........ .. ..+.....+..- .... .+..++.+-.+++
T Consensus 143 ~v~~~~~~~~~~~~-~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~------- 214 (415)
T 3rsc_A 143 AVRLSAAFASNEHY-SFSQDMVTLAGTIDPLDLPVFRDTLRDLLAEHGLSRSVVDCWNHVEQLNLVFVPKAFQ------- 214 (415)
T ss_dssp EEEEESSCCCCSSC-CHHHHHHHHHTCCCGGGCHHHHHHHHHHHHHTTCCCCHHHHHTCCCSEEEESSCTTTS-------
T ss_pred EEEEEecccccCcc-ccccccccccccCChhhHHHHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcCcccC-------
Confidence 99988554322100 00000000000000 00 011111111100 0111 1555555544444
Q ss_pred HHhhcC-CeEEEecCCCCCCCCCCCC-------CCC------------Ccc----hhhhHhhhcCCCCC-----------
Q 035856 147 DLNSKV-PSLLKVGFLTQPLPPPPLP-------PSD------------SDE----TGYLQWLDRQKPKS----------- 191 (278)
Q Consensus 147 ~~~~~~-~~v~~VG~~~~pl~~~~~~-------~~~------------~~~----~~~~~wld~~~~~s----------- 191 (278)
..+... .++.++| |....... ... ... ..+++.+.+.+...
T Consensus 215 ~~~~~~~~~~~~vG----p~~~~~~~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~g~~~~~~ 290 (415)
T 3rsc_A 215 IAGDTFDDRFVFVG----PCFDDRRFLGEWTRPADDLPVVLVSLGTTFNDRPGFFRDCARAFDGQPWHVVMTLGGQVDPA 290 (415)
T ss_dssp TTGGGCCTTEEECC----CCCCCCGGGCCCCCCSSCCCEEEEECTTTSCCCHHHHHHHHHHHTTSSCEEEEECTTTSCGG
T ss_pred CCcccCCCceEEeC----CCCCCcccCcCccccCCCCCEEEEECCCCCCChHHHHHHHHHHHhcCCcEEEEEeCCCCChH
Confidence 333333 4577888 76532110 000 000 11223333221100
Q ss_pred ---CCCCCeEEecCcchhhhcccccccEEEeeCCchhHHHHHHhCcceeeccccCChhHHHHHHHHHhcceEEecCCCcC
Q 035856 192 ---RTSGRGKIVLQAPQTQVLGHFSIGVFVIHSGANSVCESIANGVLMICRPFYGDHRMNARMVEEVWGIGVKVEGILLT 268 (278)
Q Consensus 192 ---~~~~~~~v~~w~pq~~iL~~~~v~~fitHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~ 268 (278)
..++|..+.+|+||.++|++++ +||||||+||++|++++|+|+|++|...||..||+++++. |+|+.+..+.++
T Consensus 291 ~l~~~~~~v~~~~~~~~~~ll~~ad--~~v~~~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~l~~~-g~g~~~~~~~~~ 367 (415)
T 3rsc_A 291 ALGDLPPNVEAHRWVPHVKVLEQAT--VCVTHGGMGTLMEALYWGRPLVVVPQSFDVQPMARRVDQL-GLGAVLPGEKAD 367 (415)
T ss_dssp GGCCCCTTEEEESCCCHHHHHHHEE--EEEESCCHHHHHHHHHTTCCEEECCCSGGGHHHHHHHHHH-TCEEECCGGGCC
T ss_pred HhcCCCCcEEEEecCCHHHHHhhCC--EEEECCcHHHHHHHHHhCCCEEEeCCcchHHHHHHHHHHc-CCEEEcccCCCC
Confidence 2356888899999999999999 9999999999999999999999999999999999999998 999999887889
Q ss_pred HHHHHhhhh
Q 035856 269 KSGVLQSLD 277 (278)
Q Consensus 269 ~~~l~~~i~ 277 (278)
.++|.++|+
T Consensus 368 ~~~l~~~i~ 376 (415)
T 3rsc_A 368 GDTLLAAVG 376 (415)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999998875
No 13
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=99.87 E-value=9.2e-21 Score=168.59 Aligned_cols=255 Identities=13% Similarity=0.103 Sum_probs=150.7
Q ss_pred CCceEEecCCCCCCCCC---CCCCCcHHHHHH-HHHHchHHHHHHHHHHHHcCCCCccEEEeC-CCchhHHHHHHHcCCC
Q 035856 5 DNIRVYDVEDGVPMKYA---STESNPLEAVEL-FVKATPENFKKGLDAAVSKTGRKISCFLTD-AFLTFSGEMARDMHIP 79 (278)
Q Consensus 5 ~~i~~~~i~~glp~~~~---~~~~~~~~~~~~-~~~~~~~~l~~~l~~l~~~~~~~~d~vI~D-~~~~~~~~vA~~lgIP 79 (278)
.+++|+.++..++.... ....++...+.. +.+.....+ ..+.+++++ .+||+||+| .+..++..+|+++|||
T Consensus 50 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~l~~--~~pD~Vi~d~~~~~~~~~aA~~~giP 126 (402)
T 3ia7_A 50 AGAEVVLYKSEFDTFHVPEVVKQEDAETQLHLVYVRENVAIL-RAAEEALGD--NPPDLVVYDVFPFIAGRLLAARWDRP 126 (402)
T ss_dssp TTCEEEECCCGGGTSSSSSSSCCTTHHHHHHHHHHHHHHHHH-HHHHHHHTT--CCCSEEEEESTTHHHHHHHHHHHTCC
T ss_pred cCCEEEecccccccccccccccccchHHHHHHHHHHHHHHHH-HHHHHHHhc--cCCCEEEECchHHHHHHHHHHhhCCC
Confidence 36788888754443211 122344444444 433333323 334444554 499999999 8889999999999999
Q ss_pred eEeEeCChhhhhhhhhcchhhhhhhccCC--cchHHHHHHHHHhcc----------cCC-CcEEEecchHhhhccchhhH
Q 035856 80 WFPVFVAMPYNGSAHIHTDLIHQFFINNC--EESLFSSMLSKLGGV----------LPQ-ASAAVMNFYQELYCSSQLTN 146 (278)
Q Consensus 80 ~v~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~----------~~~-~~~~l~nt~~~le~~~~~~~ 146 (278)
++.+.+........ .....+........ ....+.....+.... ... .+..++.+-.+++
T Consensus 127 ~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~------- 198 (402)
T 3ia7_A 127 AVRLTGGFAANEHY-SLFKELWKSNGQRHPADVEAVHSVLVDLLGKYGVDTPVKEYWDEIEGLTIVFLPKSFQ------- 198 (402)
T ss_dssp EEEEESSCCCBTTB-CHHHHHHHHHTCCCGGGSHHHHHHHHHHHHTTTCCSCHHHHHTCCCSCEEESSCGGGS-------
T ss_pred EEEEecccccCccc-cccccccccccccChhhHHHHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcChHhC-------
Confidence 99987544322110 00000000000000 000011111111100 111 1445555444444
Q ss_pred HHhhcC-CeEEEecCCCCCCCCCCCCC-------CC------------Ccc----hhhhHhhhcCCCCC-----------
Q 035856 147 DLNSKV-PSLLKVGFLTQPLPPPPLPP-------SD------------SDE----TGYLQWLDRQKPKS----------- 191 (278)
Q Consensus 147 ~~~~~~-~~v~~VG~~~~pl~~~~~~~-------~~------------~~~----~~~~~wld~~~~~s----------- 191 (278)
...... .++.+|| |........ .. ... ..+++.+.+.+...
T Consensus 199 ~~~~~~~~~~~~vG----p~~~~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 274 (402)
T 3ia7_A 199 PFAETFDERFAFVG----PTLTGRDGQPGWQPPRPDAPVLLVSLGNQFNEHPEFFRACAQAFADTPWHVVMAIGGFLDPA 274 (402)
T ss_dssp TTGGGCCTTEEECC----CCCCC----CCCCCSSTTCCEEEEECCSCSSCCHHHHHHHHHHHTTSSCEEEEECCTTSCGG
T ss_pred CccccCCCCeEEeC----CCCCCcccCCCCcccCCCCCEEEEECCCCCcchHHHHHHHHHHHhcCCcEEEEEeCCcCChh
Confidence 223333 4688888 765321100 00 000 11222232211100
Q ss_pred ---CCCCCeEEecCcchhhhcccccccEEEeeCCchhHHHHHHhCcceeeccc-cCChhHHHHHHHHHhcceEEecCCCc
Q 035856 192 ---RTSGRGKIVLQAPQTQVLGHFSIGVFVIHSGANSVCESIANGVLMICRPF-YGDHRMNARMVEEVWGIGVKVEGILL 267 (278)
Q Consensus 192 ---~~~~~~~v~~w~pq~~iL~~~~v~~fitHgG~~s~~eal~~GvP~l~~P~-~~DQ~~na~~~~~~~g~G~~l~~~~~ 267 (278)
+.++|..+.+|+|+.++|++++ +||||||+||++|++++|+|+|++|. ..||..|++++++. |+|+.+..+.+
T Consensus 275 ~~~~~~~~v~~~~~~~~~~ll~~ad--~~v~~~G~~t~~Ea~~~G~P~v~~p~~~~~q~~~a~~~~~~-g~g~~~~~~~~ 351 (402)
T 3ia7_A 275 VLGPLPPNVEAHQWIPFHSVLAHAR--ACLTHGTTGAVLEAFAAGVPLVLVPHFATEAAPSAERVIEL-GLGSVLRPDQL 351 (402)
T ss_dssp GGCSCCTTEEEESCCCHHHHHTTEE--EEEECCCHHHHHHHHHTTCCEEECGGGCGGGHHHHHHHHHT-TSEEECCGGGC
T ss_pred hhCCCCCcEEEecCCCHHHHHhhCC--EEEECCCHHHHHHHHHhCCCEEEeCCCcccHHHHHHHHHHc-CCEEEccCCCC
Confidence 2456888899999999999999 99999999999999999999999999 99999999999998 99999988788
Q ss_pred CHHHHHhhhh
Q 035856 268 TKSGVLQSLD 277 (278)
Q Consensus 268 ~~~~l~~~i~ 277 (278)
+.++|.++|+
T Consensus 352 ~~~~l~~~~~ 361 (402)
T 3ia7_A 352 EPASIREAVE 361 (402)
T ss_dssp SHHHHHHHHH
T ss_pred CHHHHHHHHH
Confidence 9999988875
No 14
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=99.84 E-value=1.2e-19 Score=160.90 Aligned_cols=205 Identities=15% Similarity=0.047 Sum_probs=127.8
Q ss_pred CccEEEeCCCchhHHHHHHHcCCCeEeEeCChhhhhhhhhcchhhhhhhccCCcchHHHHHHHHHh-cccCCCcEEEecc
Q 035856 56 KISCFLTDAFLTFSGEMARDMHIPWFPVFVAMPYNGSAHIHTDLIHQFFINNCEESLFSSMLSKLG-GVLPQASAAVMNF 134 (278)
Q Consensus 56 ~~d~vI~D~~~~~~~~vA~~lgIP~v~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~nt 134 (278)
+||+||+|.+..|+..+|+++|||++.+...+... . ...+. ....+.....+.. .....++.+++++
T Consensus 107 ~pD~Vi~~~~~~~~~~~a~~~giP~v~~~~~~~~~-~------~~~~~-----~~~~~~~~~~~~g~~~~~~~~~~l~~~ 174 (384)
T 2p6p_A 107 RPDLIVGGTMSYVAPLLALHLGVPHARQTWDAVDA-D------GIHPG-----ADAELRPELSELGLERLPAPDLFIDIC 174 (384)
T ss_dssp CCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCCC-T------TTHHH-----HHHHTHHHHHHTTCSSCCCCSEEEECS
T ss_pred CCcEEEECcchhhHHHHHHhcCCCEEEeccCCccc-c------hhhHH-----HHHHHHHHHHHcCCCCCCCCCeEEEEC
Confidence 89999999988899999999999999887543211 0 00000 0000111111111 1111256778887
Q ss_pred hHhhhccc----------------hhhHHHhhcC-CeEEEecCCCCCCCCCCCCCCCCcchhhhHhhhcCCCCC------
Q 035856 135 YQELYCSS----------------QLTNDLNSKV-PSLLKVGFLTQPLPPPPLPPSDSDETGYLQWLDRQKPKS------ 191 (278)
Q Consensus 135 ~~~le~~~----------------~~~~~~~~~~-~~v~~VG~~~~pl~~~~~~~~~~~~~~~~~wld~~~~~s------ 191 (278)
...++... ...+++...- .++++|.++|+.....-.... +.-..+++.|.+...+.
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~v~~Gs~~~~~~~~~~~-~~~~~~~~al~~~~~~~~~~~g~ 253 (384)
T 2p6p_A 175 PPSLRPANAAPARMMRHVATSRQCPLEPWMYTRDTRQRVLVTSGSRVAKESYDRNF-DFLRGLAKDLVRWDVELIVAAPD 253 (384)
T ss_dssp CGGGSCTTSCCCEECCCCCCCCCCBCCHHHHCCCSSCEEEEECSSSSSCCSSCCCC-TTHHHHHHHHHTTTCEEEEECCH
T ss_pred CHHHCCCCCCCCCceEecCCCCCCCCCchhhcCCCCCEEEEECCCCCccccccccH-HHHHHHHHHHhcCCcEEEEEeCC
Confidence 77665110 0112222211 234455444332110000000 11112223332211100
Q ss_pred -------CCCCCeEEecCcchhhhcccccccEEEeeCCchhHHHHHHhCcceeeccccCChhHHHHHHHHHhcceEEecC
Q 035856 192 -------RTSGRGKIVLQAPQTQVLGHFSIGVFVIHSGANSVCESIANGVLMICRPFYGDHRMNARMVEEVWGIGVKVEG 264 (278)
Q Consensus 192 -------~~~~~~~v~~w~pq~~iL~~~~v~~fitHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l~~ 264 (278)
..++|..+ +|+||.++|++++ +||||||+||++||+++|+|+|++|..+||..|++++++. |+|+.++.
T Consensus 254 ~~~~~l~~~~~~v~~-~~~~~~~~l~~~d--~~v~~~G~~t~~Ea~~~G~P~v~~p~~~dq~~~a~~~~~~-g~g~~~~~ 329 (384)
T 2p6p_A 254 TVAEALRAEVPQARV-GWTPLDVVAPTCD--LLVHHAGGVSTLTGLSAGVPQLLIPKGSVLEAPARRVADY-GAAIALLP 329 (384)
T ss_dssp HHHHHHHHHCTTSEE-ECCCHHHHGGGCS--EEEECSCTTHHHHHHHTTCCEEECCCSHHHHHHHHHHHHH-TSEEECCT
T ss_pred CCHHhhCCCCCceEE-cCCCHHHHHhhCC--EEEeCCcHHHHHHHHHhCCCEEEccCcccchHHHHHHHHC-CCeEecCc
Confidence 13578889 9999999999888 9999999999999999999999999999999999999997 99999987
Q ss_pred CCcCHHHHHhhhh
Q 035856 265 ILLTKSGVLQSLD 277 (278)
Q Consensus 265 ~~~~~~~l~~~i~ 277 (278)
+.++.++|.++|+
T Consensus 330 ~~~~~~~l~~~i~ 342 (384)
T 2p6p_A 330 GEDSTEAIADSCQ 342 (384)
T ss_dssp TCCCHHHHHHHHH
T ss_pred CCCCHHHHHHHHH
Confidence 7789999998875
No 15
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=99.84 E-value=2.2e-19 Score=162.32 Aligned_cols=82 Identities=22% Similarity=0.209 Sum_probs=76.6
Q ss_pred CCCCeEEecCcchhhhcccccccEEEeeCCchhHHHHHHhCcceeeccccCChhHHHHHHHHHhcceEEecCCCcCHHHH
Q 035856 193 TSGRGKIVLQAPQTQVLGHFSIGVFVIHSGANSVCESIANGVLMICRPFYGDHRMNARMVEEVWGIGVKVEGILLTKSGV 272 (278)
Q Consensus 193 ~~~~~~v~~w~pq~~iL~~~~v~~fitHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~~~~l 272 (278)
.++|..+.+|+||.++|++++ +||||||+||++|++++|||+|++|+..||..||+++++. |+|+.++.+.++.++|
T Consensus 317 ~~~~v~~~~~~~~~~ll~~ad--~~V~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~-g~g~~~~~~~~~~~~l 393 (441)
T 2yjn_A 317 IPDNVRTVGFVPMHALLPTCA--ATVHHGGPGSWHTAAIHGVPQVILPDGWDTGVRAQRTQEF-GAGIALPVPELTPDQL 393 (441)
T ss_dssp CCSSEEECCSCCHHHHGGGCS--EEEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHH-TSEEECCTTTCCHHHH
T ss_pred CCCCEEEecCCCHHHHHhhCC--EEEECCCHHHHHHHHHhCCCEEEeCCcccHHHHHHHHHHc-CCEEEcccccCCHHHH
Confidence 356888889999999998888 9999999999999999999999999999999999999998 9999998878899999
Q ss_pred Hhhhh
Q 035856 273 LQSLD 277 (278)
Q Consensus 273 ~~~i~ 277 (278)
.++|+
T Consensus 394 ~~~i~ 398 (441)
T 2yjn_A 394 RESVK 398 (441)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98875
No 16
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=99.79 E-value=4.4e-18 Score=151.54 Aligned_cols=82 Identities=21% Similarity=0.242 Sum_probs=70.7
Q ss_pred CCCCeEEecCcchhhhcccccccEEEeeCCchhHHHHHHhCcceeeccccCChhHHHHHHHHHhcceEEecCCCcCHHHH
Q 035856 193 TSGRGKIVLQAPQTQVLGHFSIGVFVIHSGANSVCESIANGVLMICRPFYGDHRMNARMVEEVWGIGVKVEGILLTKSGV 272 (278)
Q Consensus 193 ~~~~~~v~~w~pq~~iL~~~~v~~fitHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~~~~l 272 (278)
.++|..+.+|+|+.++|++++ +||||||.||++||+++|+|+|++|...||..|+.++++. |+|+.++.+.++.++|
T Consensus 282 ~~~~v~~~~~~~~~~ll~~ad--~~v~~gG~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~~~~-g~g~~~~~~~~~~~~l 358 (398)
T 4fzr_A 282 LPEGVLAAGQFPLSAIMPACD--VVVHHGGHGTTLTCLSEGVPQVSVPVIAEVWDSARLLHAA-GAGVEVPWEQAGVESV 358 (398)
T ss_dssp CCTTEEEESCCCHHHHGGGCS--EEEECCCHHHHHHHHHTTCCEEECCCSGGGHHHHHHHHHT-TSEEECC-------CH
T ss_pred CCCcEEEeCcCCHHHHHhhCC--EEEecCCHHHHHHHHHhCCCEEecCCchhHHHHHHHHHHc-CCEEecCcccCCHHHH
Confidence 467888899999999999999 9999999999999999999999999999999999999998 9999998777888888
Q ss_pred Hhhhh
Q 035856 273 LQSLD 277 (278)
Q Consensus 273 ~~~i~ 277 (278)
.++|+
T Consensus 359 ~~ai~ 363 (398)
T 4fzr_A 359 LAACA 363 (398)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 88775
No 17
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=99.75 E-value=5.5e-17 Score=144.46 Aligned_cols=81 Identities=19% Similarity=0.207 Sum_probs=74.3
Q ss_pred CCCCeEEecCcchhhhcccccccEEEeeCCchhHHHHHHhCcceeeccccCChhHHH--HHHHHHhcceEEecCCCcCHH
Q 035856 193 TSGRGKIVLQAPQTQVLGHFSIGVFVIHSGANSVCESIANGVLMICRPFYGDHRMNA--RMVEEVWGIGVKVEGILLTKS 270 (278)
Q Consensus 193 ~~~~~~v~~w~pq~~iL~~~~v~~fitHgG~~s~~eal~~GvP~l~~P~~~DQ~~na--~~~~~~~g~G~~l~~~~~~~~ 270 (278)
.++|..+.+|+|+.++|++++ +||||||.||++||+++|+|+|++|..+||..|+ .++++. |+|+.++.+..+.+
T Consensus 281 ~~~~v~~~~~~~~~~ll~~ad--~~v~~~G~~t~~Eal~~G~P~v~~p~~~dq~~~a~~~~~~~~-g~g~~~~~~~~~~~ 357 (398)
T 3oti_A 281 LPRNVRAVGWTPLHTLLRTCT--AVVHHGGGGTVMTAIDAGIPQLLAPDPRDQFQHTAREAVSRR-GIGLVSTSDKVDAD 357 (398)
T ss_dssp CCTTEEEESSCCHHHHHTTCS--EEEECCCHHHHHHHHHHTCCEEECCCTTCCSSCTTHHHHHHH-TSEEECCGGGCCHH
T ss_pred CCCcEEEEccCCHHHHHhhCC--EEEECCCHHHHHHHHHhCCCEEEcCCCchhHHHHHHHHHHHC-CCEEeeCCCCCCHH
Confidence 467888899999999999999 9999999999999999999999999999999999 999998 99999987778888
Q ss_pred HHHhhh
Q 035856 271 GVLQSL 276 (278)
Q Consensus 271 ~l~~~i 276 (278)
.|.+.+
T Consensus 358 ~l~~ll 363 (398)
T 3oti_A 358 LLRRLI 363 (398)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 776433
No 18
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=99.72 E-value=1.5e-16 Score=141.06 Aligned_cols=82 Identities=16% Similarity=0.222 Sum_probs=76.0
Q ss_pred CCCCeEEecCcchhhhcccccccEEEeeCCchhHHHHHHhCcceeeccccCChhHHHHHHHHHhcceEEecC--CCcCHH
Q 035856 193 TSGRGKIVLQAPQTQVLGHFSIGVFVIHSGANSVCESIANGVLMICRPFYGDHRMNARMVEEVWGIGVKVEG--ILLTKS 270 (278)
Q Consensus 193 ~~~~~~v~~w~pq~~iL~~~~v~~fitHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l~~--~~~~~~ 270 (278)
.++|..+.+|+|+.++|++++ +||||||.||++||+++|+|+|++|...||..|+.++++. |+|+.+.. +..+.+
T Consensus 268 ~~~~v~~~~~~~~~~ll~~ad--~~v~~~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~~~~-g~g~~~~~~~~~~~~~ 344 (391)
T 3tsa_A 268 LPDNARIAESVPLNLFLRTCE--LVICAGGSGTAFTATRLGIPQLVLPQYFDQFDYARNLAAA-GAGICLPDEQAQSDHE 344 (391)
T ss_dssp CCTTEEECCSCCGGGTGGGCS--EEEECCCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHT-TSEEECCSHHHHTCHH
T ss_pred CCCCEEEeccCCHHHHHhhCC--EEEeCCCHHHHHHHHHhCCCEEecCCcccHHHHHHHHHHc-CCEEecCcccccCCHH
Confidence 357888889999999998888 9999999999999999999999999999999999999998 99999987 668899
Q ss_pred HHHhhhh
Q 035856 271 GVLQSLD 277 (278)
Q Consensus 271 ~l~~~i~ 277 (278)
.|.++|+
T Consensus 345 ~l~~ai~ 351 (391)
T 3tsa_A 345 QFTDSIA 351 (391)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9988875
No 19
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=99.70 E-value=3.3e-17 Score=128.88 Aligned_cols=83 Identities=27% Similarity=0.463 Sum_probs=76.7
Q ss_pred CCCeEEecCcchhhhcccccccEEEeeCCchhHHHHHHhCcceeeccccCChhHHHHHHHHHhcceEEecCCCcCHHHHH
Q 035856 194 SGRGKIVLQAPQTQVLGHFSIGVFVIHSGANSVCESIANGVLMICRPFYGDHRMNARMVEEVWGIGVKVEGILLTKSGVL 273 (278)
Q Consensus 194 ~~~~~v~~w~pq~~iL~~~~v~~fitHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~~~~l~ 273 (278)
++|..+.+|+||.+++.|++..+||||||+||++|++++|+|+|++|...||..||+++++. |+|+.++.+.++.++|.
T Consensus 67 ~~~v~~~~~~~~~~~l~~~~ad~~I~~~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l~~~-g~g~~~~~~~~~~~~l~ 145 (170)
T 2o6l_A 67 GLNTRLYKWIPQNDLLGHPKTRAFITHGGANGIYEAIYHGIPMVGIPLFADQPDNIAHMKAR-GAAVRVDFNTMSSTDLL 145 (170)
T ss_dssp CTTEEEESSCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTT-TSEEECCTTTCCHHHHH
T ss_pred CCcEEEecCCCHHHHhcCCCcCEEEEcCCccHHHHHHHcCCCEEeccchhhHHHHHHHHHHc-CCeEEeccccCCHHHHH
Confidence 56888899999999997766669999999999999999999999999999999999999997 99999988788999999
Q ss_pred hhhh
Q 035856 274 QSLD 277 (278)
Q Consensus 274 ~~i~ 277 (278)
++|+
T Consensus 146 ~~i~ 149 (170)
T 2o6l_A 146 NALK 149 (170)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8875
No 20
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=99.67 E-value=2.8e-15 Score=133.67 Aligned_cols=82 Identities=22% Similarity=0.327 Sum_probs=76.6
Q ss_pred CCCCeEEecCcchhhhcccccccEEEeeCCchhHHHHHHhCcceeeccccCChhHHHHHHHHHhcceEEecCCCcCHHHH
Q 035856 193 TSGRGKIVLQAPQTQVLGHFSIGVFVIHSGANSVCESIANGVLMICRPFYGDHRMNARMVEEVWGIGVKVEGILLTKSGV 272 (278)
Q Consensus 193 ~~~~~~v~~w~pq~~iL~~~~v~~fitHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~~~~l 272 (278)
.+++..+.+|+|+.++|++++ +||+|||+|+++||+++|+|+|++|..+||..|+..+++. |.|..+..+.++.++|
T Consensus 290 ~~~~v~~~~~~~~~~~l~~ad--~~v~~~g~~t~~Ea~a~G~P~v~~p~~~~q~~~~~~v~~~-g~g~~~~~~~~~~~~l 366 (412)
T 3otg_A 290 VPANVRLESWVPQAALLPHVD--LVVHHGGSGTTLGALGAGVPQLSFPWAGDSFANAQAVAQA-GAGDHLLPDNISPDSV 366 (412)
T ss_dssp CCTTEEEESCCCHHHHGGGCS--EEEESCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHH-TSEEECCGGGCCHHHH
T ss_pred CCCcEEEeCCCCHHHHHhcCc--EEEECCchHHHHHHHHhCCCEEecCCchhHHHHHHHHHHc-CCEEecCcccCCHHHH
Confidence 356888889999999999999 9999999999999999999999999999999999999998 9999998877899999
Q ss_pred Hhhhh
Q 035856 273 LQSLD 277 (278)
Q Consensus 273 ~~~i~ 277 (278)
.++|+
T Consensus 367 ~~ai~ 371 (412)
T 3otg_A 367 SGAAK 371 (412)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98875
No 21
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=99.36 E-value=2.2e-11 Score=107.22 Aligned_cols=81 Identities=15% Similarity=0.165 Sum_probs=71.7
Q ss_pred CCCeEEecCcch-hhhcccccccEEEeeCCchhHHHHHHhCcceeecccc----CChhHHHHHHHHHhcceEEecCCCcC
Q 035856 194 SGRGKIVLQAPQ-TQVLGHFSIGVFVIHSGANSVCESIANGVLMICRPFY----GDHRMNARMVEEVWGIGVKVEGILLT 268 (278)
Q Consensus 194 ~~~~~v~~w~pq-~~iL~~~~v~~fitHgG~~s~~eal~~GvP~l~~P~~----~DQ~~na~~~~~~~g~G~~l~~~~~~ 268 (278)
+.+..+.+|+++ .++++.++ ++|||+|.+|+.|++++|+|+|.+|+- .+|..||+.+++. |+|+.+..+.++
T Consensus 234 ~~~~~v~~f~~dm~~~l~~aD--lvI~raG~~Tv~E~~a~G~P~Ilip~p~~~~~~Q~~NA~~l~~~-G~a~~l~~~~~~ 310 (365)
T 3s2u_A 234 AVEADVAPFISDMAAAYAWAD--LVICRAGALTVSELTAAGLPAFLVPLPHAIDDHQTRNAEFLVRS-GAGRLLPQKSTG 310 (365)
T ss_dssp TCCCEEESCCSCHHHHHHHCS--EEEECCCHHHHHHHHHHTCCEEECC-----CCHHHHHHHHHHTT-TSEEECCTTTCC
T ss_pred ccccccccchhhhhhhhccce--EEEecCCcchHHHHHHhCCCeEEeccCCCCCcHHHHHHHHHHHC-CCEEEeecCCCC
Confidence 456778899987 57999999 999999999999999999999999863 5799999999999 999999888899
Q ss_pred HHHHHhhhh
Q 035856 269 KSGVLQSLD 277 (278)
Q Consensus 269 ~~~l~~~i~ 277 (278)
.++|.++|+
T Consensus 311 ~~~L~~~i~ 319 (365)
T 3s2u_A 311 AAELAAQLS 319 (365)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999988875
No 22
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=99.12 E-value=1.7e-11 Score=99.92 Aligned_cols=66 Identities=12% Similarity=0.039 Sum_probs=57.2
Q ss_pred eEEecCcchh-hhcc-cccccEEEeeCCchhHHHHHHhCcceeecccc----CChhHHHHHHHHHhcceEEecCC
Q 035856 197 GKIVLQAPQT-QVLG-HFSIGVFVIHSGANSVCESIANGVLMICRPFY----GDHRMNARMVEEVWGIGVKVEGI 265 (278)
Q Consensus 197 ~~v~~w~pq~-~iL~-~~~v~~fitHgG~~s~~eal~~GvP~l~~P~~----~DQ~~na~~~~~~~g~G~~l~~~ 265 (278)
..+.+|+++. ++++ .++ ++|||||.||++|++++|+|+|++|.- .+|..||+++++. |.++.+..+
T Consensus 116 v~v~~f~~~m~~~l~~~Ad--lvIshaGagTv~Eal~~G~P~IvVP~~~~~~~HQ~~nA~~l~~~-G~~~~~~~~ 187 (224)
T 2jzc_A 116 VIGFDFSTKMQSIIRDYSD--LVISHAGTGSILDSLRLNKPLIVCVNDSLMDNHQQQIADKFVEL-GYVWSCAPT 187 (224)
T ss_dssp EEECCSSSSHHHHHHHHCS--CEEESSCHHHHHHHHHTTCCCCEECCSSCCCCHHHHHHHHHHHH-SCCCEECSC
T ss_pred EEEeeccchHHHHHHhcCC--EEEECCcHHHHHHHHHhCCCEEEEcCcccccchHHHHHHHHHHC-CCEEEcCHH
Confidence 3455888875 8899 999 999999999999999999999999974 3599999999998 999877443
No 23
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=98.48 E-value=2.8e-07 Score=80.21 Aligned_cols=81 Identities=25% Similarity=0.238 Sum_probs=71.4
Q ss_pred CCeEEecCcch-hhhcccccccEEEeeCCchhHHHHHHhCcceeecccc---CChhHHHHHHHHHhcceEEecCCCcCHH
Q 035856 195 GRGKIVLQAPQ-TQVLGHFSIGVFVIHSGANSVCESIANGVLMICRPFY---GDHRMNARMVEEVWGIGVKVEGILLTKS 270 (278)
Q Consensus 195 ~~~~v~~w~pq-~~iL~~~~v~~fitHgG~~s~~eal~~GvP~l~~P~~---~DQ~~na~~~~~~~g~G~~l~~~~~~~~ 270 (278)
++..+.+|+++ ..++..++ +||+++|.++++||+++|+|+|+.|.. .||..|++.+.+. |.|..++.++.+.+
T Consensus 237 ~~v~~~g~~~~~~~~~~~ad--~~v~~sg~~~~~EAma~G~Pvi~~~~~g~~~~q~~~~~~~~~~-g~g~~~~~~d~~~~ 313 (364)
T 1f0k_A 237 PQHKVTEFIDDMAAAYAWAD--VVVCRSGALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEKA-GAAKIIEQPQLSVD 313 (364)
T ss_dssp TTSEEESCCSCHHHHHHHCS--EEEECCCHHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHHHHT-TSEEECCGGGCCHH
T ss_pred CceEEecchhhHHHHHHhCC--EEEECCchHHHHHHHHhCCCEEEeeCCCCchhHHHHHHHHHhC-CcEEEeccccCCHH
Confidence 46777899844 67899999 999999989999999999999999987 6899999999998 99999987777799
Q ss_pred HHHhhhhC
Q 035856 271 GVLQSLDL 278 (278)
Q Consensus 271 ~l~~~i~~ 278 (278)
++.++|++
T Consensus 314 ~la~~i~~ 321 (364)
T 1f0k_A 314 AVANTLAG 321 (364)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHh
Confidence 99988863
No 24
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=98.38 E-value=5.2e-07 Score=76.19 Aligned_cols=66 Identities=9% Similarity=0.135 Sum_probs=59.8
Q ss_pred CCeEEecCcchh-hhcccccccEEEeeCCchhHHHHHHhCcceeeccccCChhHHHHHHHHHhcceEEecC
Q 035856 195 GRGKIVLQAPQT-QVLGHFSIGVFVIHSGANSVCESIANGVLMICRPFYGDHRMNARMVEEVWGIGVKVEG 264 (278)
Q Consensus 195 ~~~~v~~w~pq~-~iL~~~~v~~fitHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l~~ 264 (278)
.|..+..++++. +++..++ ++|++|| +|++|+++.|+|+|.+|...+|..||+.+++. |+++.+..
T Consensus 208 ~~v~v~~~~~~m~~~m~~aD--lvI~~gG-~T~~E~~~~g~P~i~ip~~~~Q~~nA~~l~~~-G~~~~~~~ 274 (282)
T 3hbm_A 208 NNIRLFIDHENIAKLMNESN--KLIISAS-SLVNEALLLKANFKAICYVKNQESTATWLAKK-GYEVEYKY 274 (282)
T ss_dssp SSEEEEESCSCHHHHHHTEE--EEEEESS-HHHHHHHHTTCCEEEECCSGGGHHHHHHHHHT-TCEEECGG
T ss_pred CCEEEEeCHHHHHHHHHHCC--EEEECCc-HHHHHHHHcCCCEEEEeCCCCHHHHHHHHHHC-CCEEEcch
Confidence 477788898875 6889999 9999999 89999999999999999999999999999998 99998753
No 25
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=96.56 E-value=0.081 Score=45.55 Aligned_cols=74 Identities=20% Similarity=0.147 Sum_probs=49.9
Q ss_pred CCCeEEecCcchhh---hcccccccEEEe-----------eCCchhHHHHHHhCcceeeccccCChhHHHHHHHHHhcce
Q 035856 194 SGRGKIVLQAPQTQ---VLGHFSIGVFVI-----------HSGANSVCESIANGVLMICRPFYGDHRMNARMVEEVWGIG 259 (278)
Q Consensus 194 ~~~~~v~~w~pq~~---iL~~~~v~~fit-----------HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~G 259 (278)
.++..+.+|+|+.+ ++..++ ++|. .|.-++++||+++|+|+|+.+..+- .. +.+. |.|
T Consensus 252 ~~~v~~~g~~~~~~~~~~~~~ad--~~v~ps~~~~~~~~~e~~~~~~~Ea~a~G~PvI~~~~~~~----~e-~i~~-~~g 323 (394)
T 3okp_A 252 SQNVKFLGRLEYQDMINTLAAAD--IFAMPARTRGGGLDVEGLGIVYLEAQACGVPVIAGTSGGA----PE-TVTP-ATG 323 (394)
T ss_dssp GGGEEEEESCCHHHHHHHHHHCS--EEEECCCCBGGGTBCCSSCHHHHHHHHTTCCEEECSSTTG----GG-GCCT-TTE
T ss_pred cCeEEEcCCCCHHHHHHHHHhCC--EEEecCccccccccccccCcHHHHHHHcCCCEEEeCCCCh----HH-HHhc-CCc
Confidence 36777789998765 677888 5554 3445788999999999999775321 11 2233 567
Q ss_pred EEecCCCcCHHHHHhhhh
Q 035856 260 VKVEGILLTKSGVLQSLD 277 (278)
Q Consensus 260 ~~l~~~~~~~~~l~~~i~ 277 (278)
..++.+ +.+++.++|+
T Consensus 324 ~~~~~~--d~~~l~~~i~ 339 (394)
T 3okp_A 324 LVVEGS--DVDKLSELLI 339 (394)
T ss_dssp EECCTT--CHHHHHHHHH
T ss_pred eEeCCC--CHHHHHHHHH
Confidence 777653 5677777664
No 26
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=96.47 E-value=0.0048 Score=47.60 Aligned_cols=74 Identities=11% Similarity=0.072 Sum_probs=53.7
Q ss_pred CCCeEEecCcch---hhhcccccccEEEe---eCCc-hhHHHHHHhCcceeeccccCChhHHHHHHHHHhcceEEecCCC
Q 035856 194 SGRGKIVLQAPQ---TQVLGHFSIGVFVI---HSGA-NSVCESIANGVLMICRPFYGDHRMNARMVEEVWGIGVKVEGIL 266 (278)
Q Consensus 194 ~~~~~v~~w~pq---~~iL~~~~v~~fit---HgG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l~~~~ 266 (278)
.++..+.+|+++ ..++..++ ++|. +-|+ ++++||+++|+|+|+... ..+...+.+. +.|..+ ..
T Consensus 77 ~~~v~~~g~~~~~e~~~~~~~ad--i~v~ps~~e~~~~~~~Eama~G~PvI~~~~----~~~~e~i~~~-~~g~~~-~~- 147 (177)
T 2f9f_A 77 PDNVKFLGSVSEEELIDLYSRCK--GLLCTAKDEDFGLTPIEAMASGKPVIAVNE----GGFKETVINE-KTGYLV-NA- 147 (177)
T ss_dssp CTTEEEEESCCHHHHHHHHHHCS--EEEECCSSCCSCHHHHHHHHTTCCEEEESS----HHHHHHCCBT-TTEEEE-CS-
T ss_pred CCcEEEeCCCCHHHHHHHHHhCC--EEEeCCCcCCCChHHHHHHHcCCcEEEeCC----CCHHHHhcCC-CccEEe-CC-
Confidence 568888899998 56788888 5554 3444 489999999999999753 4455555554 678887 43
Q ss_pred cCHHHHHhhhh
Q 035856 267 LTKSGVLQSLD 277 (278)
Q Consensus 267 ~~~~~l~~~i~ 277 (278)
+.+++.++|+
T Consensus 148 -d~~~l~~~i~ 157 (177)
T 2f9f_A 148 -DVNEIIDAMK 157 (177)
T ss_dssp -CHHHHHHHHH
T ss_pred -CHHHHHHHHH
Confidence 6777777764
No 27
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=96.41 E-value=0.0071 Score=52.31 Aligned_cols=72 Identities=15% Similarity=0.059 Sum_probs=53.8
Q ss_pred CCeEEecCcch---hhhcccccccEEEeeCCchhHHHHHHhCcceeeccccCChhHHHHHHHHHhcceEEecCCCcCHHH
Q 035856 195 GRGKIVLQAPQ---TQVLGHFSIGVFVIHSGANSVCESIANGVLMICRPFYGDHRMNARMVEEVWGIGVKVEGILLTKSG 271 (278)
Q Consensus 195 ~~~~v~~w~pq---~~iL~~~~v~~fitHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~~~~ 271 (278)
++..+.+++++ ..+++.++ +||+++| |.++||+++|+|+|+.+..+++.. +.+. |.|+.+. .+.++
T Consensus 255 ~~v~~~g~~g~~~~~~~~~~ad--~~v~~S~-g~~lEA~a~G~PvI~~~~~~~~~~----~~~~-g~g~lv~---~d~~~ 323 (376)
T 1v4v_A 255 RNFVLLDPLEYGSMAALMRASL--LLVTDSG-GLQEEGAALGVPVVVLRNVTERPE----GLKA-GILKLAG---TDPEG 323 (376)
T ss_dssp TTEEEECCCCHHHHHHHHHTEE--EEEESCH-HHHHHHHHTTCCEEECSSSCSCHH----HHHH-TSEEECC---SCHHH
T ss_pred CCEEEECCCCHHHHHHHHHhCc--EEEECCc-CHHHHHHHcCCCEEeccCCCcchh----hhcC-CceEECC---CCHHH
Confidence 46777765555 47889999 8999884 445699999999999887677665 2455 8888775 27788
Q ss_pred HHhhhh
Q 035856 272 VLQSLD 277 (278)
Q Consensus 272 l~~~i~ 277 (278)
|.+++.
T Consensus 324 la~~i~ 329 (376)
T 1v4v_A 324 VYRVVK 329 (376)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 887764
No 28
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=96.14 E-value=0.0061 Score=52.80 Aligned_cols=72 Identities=11% Similarity=0.049 Sum_probs=54.2
Q ss_pred CCeEEecCcch---hhhcccccccEEEeeCCchhHHHHHHhCcceeeccccCChhHHHHHHHHHhcceEEecCCCcCHHH
Q 035856 195 GRGKIVLQAPQ---TQVLGHFSIGVFVIHSGANSVCESIANGVLMICRPFYGDHRMNARMVEEVWGIGVKVEGILLTKSG 271 (278)
Q Consensus 195 ~~~~v~~w~pq---~~iL~~~~v~~fitHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~~~~ 271 (278)
++..+.+++++ ..++..++ +||+.+|. .++||+++|+|+|+.+..++.. .+.+. |.|..++. +.++
T Consensus 263 ~~v~~~g~~~~~~~~~~~~~ad--~~v~~Sg~-~~lEA~a~G~PvI~~~~~~~~~----e~v~~-g~g~lv~~---d~~~ 331 (384)
T 1vgv_A 263 KNVILIDPQEYLPFVWLMNHAW--LILTDSGG-IQEEAPSLGKPVLVMRDTTERP----EAVTA-GTVRLVGT---DKQR 331 (384)
T ss_dssp TTEEEECCCCHHHHHHHHHHCS--EEEESSST-GGGTGGGGTCCEEEESSCCSCH----HHHHH-TSEEEECS---SHHH
T ss_pred CCEEEeCCCCHHHHHHHHHhCc--EEEECCcc-hHHHHHHcCCCEEEccCCCCcc----hhhhC-CceEEeCC---CHHH
Confidence 56777666665 46788999 89998864 4889999999999998755543 24566 88988864 6788
Q ss_pred HHhhhh
Q 035856 272 VLQSLD 277 (278)
Q Consensus 272 l~~~i~ 277 (278)
+.++|.
T Consensus 332 la~~i~ 337 (384)
T 1vgv_A 332 IVEEVT 337 (384)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 887764
No 29
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=94.99 E-value=0.046 Score=46.91 Aligned_cols=72 Identities=15% Similarity=0.082 Sum_probs=52.3
Q ss_pred CCeEEecCcchh---hhcccccccEEEeeCCchhHHHHHHhCcceeeccccCChhHHHHHHHHHhcceEEecCCCcCHHH
Q 035856 195 GRGKIVLQAPQT---QVLGHFSIGVFVIHSGANSVCESIANGVLMICRPFYGDHRMNARMVEEVWGIGVKVEGILLTKSG 271 (278)
Q Consensus 195 ~~~~v~~w~pq~---~iL~~~~v~~fitHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~~~~ 271 (278)
++..+.+++++. .++..++ +||+.+| +.++||+++|+|+|+....+... .+.+. |.|..++. +.++
T Consensus 263 ~~v~~~g~~~~~~~~~~~~~ad--~~v~~sg-~~~lEA~a~G~Pvi~~~~~~~~~----e~v~~-g~g~~v~~---d~~~ 331 (375)
T 3beo_A 263 GRIHLIEPLDVIDFHNVAARSY--LMLTDSG-GVQEEAPSLGVPVLVLRDTTERP----EGIEA-GTLKLAGT---DEET 331 (375)
T ss_dssp TTEEEECCCCHHHHHHHHHTCS--EEEECCH-HHHHHHHHHTCCEEECSSCCSCH----HHHHT-TSEEECCS---CHHH
T ss_pred CCEEEeCCCCHHHHHHHHHhCc--EEEECCC-ChHHHHHhcCCCEEEecCCCCCc----eeecC-CceEEcCC---CHHH
Confidence 577776777654 6778888 8888874 45889999999999986544432 24555 88887753 6788
Q ss_pred HHhhhh
Q 035856 272 VLQSLD 277 (278)
Q Consensus 272 l~~~i~ 277 (278)
+.++|.
T Consensus 332 la~~i~ 337 (375)
T 3beo_A 332 IFSLAD 337 (375)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 887764
No 30
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=94.26 E-value=0.054 Score=47.70 Aligned_cols=72 Identities=14% Similarity=0.049 Sum_probs=53.2
Q ss_pred CCeEEecCcch---hhhcccccccEEEeeCCchhHHHHHHhCcceeeccccCChhHHHHHHHHHhcceEEecCCCcCHHH
Q 035856 195 GRGKIVLQAPQ---TQVLGHFSIGVFVIHSGANSVCESIANGVLMICRPFYGDHRMNARMVEEVWGIGVKVEGILLTKSG 271 (278)
Q Consensus 195 ~~~~v~~w~pq---~~iL~~~~v~~fitHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~~~~ 271 (278)
++..+.+++++ ..++++++ ++|+-.| +.+.||.+.|+|+|+.|-.++++. +.+. |.|+.+.. +.++
T Consensus 282 ~~v~l~~~l~~~~~~~l~~~ad--~vv~~SG-g~~~EA~a~g~PvV~~~~~~~~~e----~v~~-g~~~lv~~---d~~~ 350 (403)
T 3ot5_A 282 ERIHLIEPLDAIDFHNFLRKSY--LVFTDSG-GVQEEAPGMGVPVLVLRDTTERPE----GIEA-GTLKLIGT---NKEN 350 (403)
T ss_dssp TTEEEECCCCHHHHHHHHHHEE--EEEECCH-HHHHHGGGTTCCEEECCSSCSCHH----HHHH-TSEEECCS---CHHH
T ss_pred CCEEEeCCCCHHHHHHHHHhcC--EEEECCc-cHHHHHHHhCCCEEEecCCCcchh----heeC-CcEEEcCC---CHHH
Confidence 57778888764 46778888 8998875 334799999999999976677654 2466 88877653 6777
Q ss_pred HHhhhh
Q 035856 272 VLQSLD 277 (278)
Q Consensus 272 l~~~i~ 277 (278)
|.++++
T Consensus 351 l~~ai~ 356 (403)
T 3ot5_A 351 LIKEAL 356 (403)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 777664
No 31
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=93.95 E-value=0.06 Score=47.26 Aligned_cols=72 Identities=10% Similarity=0.054 Sum_probs=52.1
Q ss_pred CCeEEecCcch---hhhcccccccEEEeeCCchhHHHHHHhCcceeeccccCChhHHHHHHHHHhcceEEecCCCcCHHH
Q 035856 195 GRGKIVLQAPQ---TQVLGHFSIGVFVIHSGANSVCESIANGVLMICRPFYGDHRMNARMVEEVWGIGVKVEGILLTKSG 271 (278)
Q Consensus 195 ~~~~v~~w~pq---~~iL~~~~v~~fitHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~~~~ 271 (278)
++..+.+++++ ..+++.++ +||+-.| |.+.||.++|+|+|+..-.++++ .+.+. |.++.+.. +.++
T Consensus 288 ~~v~~~~~lg~~~~~~l~~~ad--~vv~~SG-g~~~EA~a~G~PvV~~~~~~~~~----e~v~~-G~~~lv~~---d~~~ 356 (396)
T 3dzc_A 288 SNIVLIEPQQYLPFVYLMDRAH--IILTDSG-GIQEEAPSLGKPVLVMRETTERP----EAVAA-GTVKLVGT---NQQQ 356 (396)
T ss_dssp TTEEEECCCCHHHHHHHHHHCS--EEEESCS-GGGTTGGGGTCCEEECCSSCSCH----HHHHH-TSEEECTT---CHHH
T ss_pred CCEEEeCCCCHHHHHHHHHhcC--EEEECCc-cHHHHHHHcCCCEEEccCCCcch----HHHHc-CceEEcCC---CHHH
Confidence 56777666643 46788999 8999888 66679999999999985555653 24555 88766543 5777
Q ss_pred HHhhhh
Q 035856 272 VLQSLD 277 (278)
Q Consensus 272 l~~~i~ 277 (278)
|.++++
T Consensus 357 l~~ai~ 362 (396)
T 3dzc_A 357 ICDALS 362 (396)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 777764
No 32
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=93.80 E-value=0.086 Score=45.64 Aligned_cols=77 Identities=13% Similarity=0.115 Sum_probs=53.4
Q ss_pred CCCeEEecCcchh---hhcccccccEEEe--eCCc-hhHHHHHHhCcceeeccccCChhHHHHHHHHHhcceEEecCCCc
Q 035856 194 SGRGKIVLQAPQT---QVLGHFSIGVFVI--HSGA-NSVCESIANGVLMICRPFYGDHRMNARMVEEVWGIGVKVEGILL 267 (278)
Q Consensus 194 ~~~~~v~~w~pq~---~iL~~~~v~~fit--HgG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~ 267 (278)
.++..+.+++++. .++..+++..+-+ +-|+ ++++||+++|+|+|+.+. ......+.+. +.|..++.+
T Consensus 262 ~~~v~~~g~~~~~~~~~~~~~adv~v~ps~~~e~~~~~~~Ea~a~G~PvI~~~~----~~~~e~i~~~-~~g~~~~~~-- 334 (406)
T 2gek_A 262 AGHLRFLGQVDDATKASAMRSADVYCAPHLGGESFGIVLVEAMAAGTAVVASDL----DAFRRVLADG-DAGRLVPVD-- 334 (406)
T ss_dssp GGGEEECCSCCHHHHHHHHHHSSEEEECCCSCCSSCHHHHHHHHHTCEEEECCC----HHHHHHHTTT-TSSEECCTT--
T ss_pred cCcEEEEecCCHHHHHHHHHHCCEEEecCCCCCCCchHHHHHHHcCCCEEEecC----CcHHHHhcCC-CceEEeCCC--
Confidence 3567777999875 7788888433332 3444 589999999999999765 4455556654 678887654
Q ss_pred CHHHHHhhhh
Q 035856 268 TKSGVLQSLD 277 (278)
Q Consensus 268 ~~~~l~~~i~ 277 (278)
+.+++.++|.
T Consensus 335 d~~~l~~~i~ 344 (406)
T 2gek_A 335 DADGMAAALI 344 (406)
T ss_dssp CHHHHHHHHH
T ss_pred CHHHHHHHHH
Confidence 5677777664
No 33
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=93.11 E-value=0.097 Score=44.38 Aligned_cols=75 Identities=11% Similarity=0.038 Sum_probs=51.3
Q ss_pred CCeEEecCcchh---hhcccccccEEEee-----------CCc-hhHHHHHHhCcceeeccccCChhHHHHHHHH--Hhc
Q 035856 195 GRGKIVLQAPQT---QVLGHFSIGVFVIH-----------SGA-NSVCESIANGVLMICRPFYGDHRMNARMVEE--VWG 257 (278)
Q Consensus 195 ~~~~v~~w~pq~---~iL~~~~v~~fitH-----------gG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~--~~g 257 (278)
++..+.+|+++. .++..+++-++-+. -|+ ++++||+++|+|+|+.... -+...+.+ . +
T Consensus 212 ~~v~~~g~~~~~~l~~~~~~adv~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~~----~~~e~~~~~~~-~ 286 (342)
T 2iuy_A 212 STVEPIGEVGGERRLDLLASAHAVLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGNG----CLAEIVPSVGE-V 286 (342)
T ss_dssp TTEEECCCCCHHHHHHHHHHCSEEEECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCTT----THHHHGGGGEE-E
T ss_pred CCEEEeccCCHHHHHHHHHhCCEEEECCcccccccccccccCccHHHHHHHhcCCCEEEcCCC----ChHHHhcccCC-C
Confidence 678888999986 67888884333233 233 6899999999999998752 34445544 3 4
Q ss_pred ceEEecCCCcCHHHHHhhhh
Q 035856 258 IGVKVEGILLTKSGVLQSLD 277 (278)
Q Consensus 258 ~G~~l~~~~~~~~~l~~~i~ 277 (278)
.|..++. +.+++.++|+
T Consensus 287 ~g~~~~~---d~~~l~~~i~ 303 (342)
T 2iuy_A 287 VGYGTDF---APDEARRTLA 303 (342)
T ss_dssp CCSSSCC---CHHHHHHHHH
T ss_pred ceEEcCC---CHHHHHHHHH
Confidence 5555543 6788888775
No 34
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=92.97 E-value=0.15 Score=43.61 Aligned_cols=75 Identities=8% Similarity=0.170 Sum_probs=53.4
Q ss_pred CCCeEEecCcch-hhhcccccccEEEe----eCCchhHHHHHHhCcceeeccccCChhHHHHHHHHHhcceEEec-CCCc
Q 035856 194 SGRGKIVLQAPQ-TQVLGHFSIGVFVI----HSGANSVCESIANGVLMICRPFYGDHRMNARMVEEVWGIGVKVE-GILL 267 (278)
Q Consensus 194 ~~~~~v~~w~pq-~~iL~~~~v~~fit----HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l~-~~~~ 267 (278)
.++..+.++..+ ..++..++ +||. .+.-++++||+++|+|+|+.... .+...+.+. +.|..+. .+
T Consensus 252 ~~~v~~~g~~~~~~~~~~~ad--~~v~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~----~~~e~i~~~-~~g~~~~~~~-- 322 (374)
T 2iw1_A 252 RSNVHFFSGRNDVSELMAAAD--LLLHPAYQEAAGIVLLEAITAGLPVLTTAVC----GYAHYIADA-NCGTVIAEPF-- 322 (374)
T ss_dssp GGGEEEESCCSCHHHHHHHCS--EEEECCSCCSSCHHHHHHHHHTCCEEEETTS----TTTHHHHHH-TCEEEECSSC--
T ss_pred CCcEEECCCcccHHHHHHhcC--EEEeccccCCcccHHHHHHHCCCCEEEecCC----CchhhhccC-CceEEeCCCC--
Confidence 356666676443 56788888 5664 34557899999999999998753 345567776 8999886 43
Q ss_pred CHHHHHhhhh
Q 035856 268 TKSGVLQSLD 277 (278)
Q Consensus 268 ~~~~l~~~i~ 277 (278)
+.+++.++|+
T Consensus 323 ~~~~l~~~i~ 332 (374)
T 2iw1_A 323 SQEQLNEVLR 332 (374)
T ss_dssp CHHHHHHHHH
T ss_pred CHHHHHHHHH
Confidence 6777777764
No 35
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=92.37 E-value=0.17 Score=44.39 Aligned_cols=75 Identities=19% Similarity=0.176 Sum_probs=52.9
Q ss_pred CCCeEEecCcchh---hhcccccccEEEeeC---C-chhHHHHHHhCcceeeccccCChhHHHHHHHHHhcceEEecCCC
Q 035856 194 SGRGKIVLQAPQT---QVLGHFSIGVFVIHS---G-ANSVCESIANGVLMICRPFYGDHRMNARMVEEVWGIGVKVEGIL 266 (278)
Q Consensus 194 ~~~~~v~~w~pq~---~iL~~~~v~~fitHg---G-~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l~~~~ 266 (278)
.++..+.+|+|+. .++..++ +||.-. | -++++||+++|+|+|+.+. ......+.+. +.|..++.+
T Consensus 305 ~~~v~~~g~~~~~~~~~~~~~ad--v~v~ps~~e~~~~~~~Eama~G~PvI~~~~----~~~~e~i~~~-~~g~~~~~~- 376 (438)
T 3c48_A 305 EKRIRFLDPRPPSELVAVYRAAD--IVAVPSFNESFGLVAMEAQASGTPVIAARV----GGLPIAVAEG-ETGLLVDGH- 376 (438)
T ss_dssp TTTEEEECCCCHHHHHHHHHHCS--EEEECCSCCSSCHHHHHHHHTTCCEEEESC----TTHHHHSCBT-TTEEEESSC-
T ss_pred CCcEEEcCCCChHHHHHHHHhCC--EEEECccccCCchHHHHHHHcCCCEEecCC----CChhHHhhCC-CcEEECCCC-
Confidence 4677888999874 5778888 566432 3 3689999999999999764 3344445554 678888654
Q ss_pred cCHHHHHhhhh
Q 035856 267 LTKSGVLQSLD 277 (278)
Q Consensus 267 ~~~~~l~~~i~ 277 (278)
+.+++.++|.
T Consensus 377 -d~~~la~~i~ 386 (438)
T 3c48_A 377 -SPHAWADALA 386 (438)
T ss_dssp -CHHHHHHHHH
T ss_pred -CHHHHHHHHH
Confidence 5777777664
No 36
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=92.15 E-value=0.31 Score=37.57 Aligned_cols=72 Identities=13% Similarity=0.145 Sum_probs=50.6
Q ss_pred CeEE-ecCcchh---hhcccccccEEEeeC---C-chhHHHHHHhCcceeeccccCChhHHHHHHHHHhcceEEecCCCc
Q 035856 196 RGKI-VLQAPQT---QVLGHFSIGVFVIHS---G-ANSVCESIANGVLMICRPFYGDHRMNARMVEEVWGIGVKVEGILL 267 (278)
Q Consensus 196 ~~~v-~~w~pq~---~iL~~~~v~~fitHg---G-~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~ 267 (278)
+..+ .+++++. .++..++ ++|... | -++++||+++|+|+|+... ......+ +. +.|..++.+
T Consensus 96 ~v~~~~g~~~~~~~~~~~~~ad--~~l~ps~~e~~~~~~~Ea~a~G~PvI~~~~----~~~~e~~-~~-~~g~~~~~~-- 165 (200)
T 2bfw_A 96 NVKVITEMLSREFVRELYGSVD--FVIIPSYFEPFGLVALEAMCLGAIPIASAV----GGLRDII-TN-ETGILVKAG-- 165 (200)
T ss_dssp TEEEECSCCCHHHHHHHHTTCS--EEEECCSCCSSCHHHHHHHHTTCEEEEESC----HHHHHHC-CT-TTCEEECTT--
T ss_pred CEEEEeccCCHHHHHHHHHHCC--EEEECCCCCCccHHHHHHHHCCCCEEEeCC----CChHHHc-CC-CceEEecCC--
Confidence 7888 8999854 5678888 555422 3 3678999999999999754 3444455 44 678888754
Q ss_pred CHHHHHhhhh
Q 035856 268 TKSGVLQSLD 277 (278)
Q Consensus 268 ~~~~l~~~i~ 277 (278)
+.+++.++|.
T Consensus 166 ~~~~l~~~i~ 175 (200)
T 2bfw_A 166 DPGELANAIL 175 (200)
T ss_dssp CHHHHHHHHH
T ss_pred CHHHHHHHHH
Confidence 5677776654
No 37
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=91.45 E-value=0.34 Score=42.29 Aligned_cols=72 Identities=10% Similarity=-0.033 Sum_probs=51.0
Q ss_pred CCeEEecCcch---hhhcccccccEEEeeCCchhHHHHHHhCcceeeccccCChhHHHHHHHHHhcceEEecCCCcCHHH
Q 035856 195 GRGKIVLQAPQ---TQVLGHFSIGVFVIHSGANSVCESIANGVLMICRPFYGDHRMNARMVEEVWGIGVKVEGILLTKSG 271 (278)
Q Consensus 195 ~~~~v~~w~pq---~~iL~~~~v~~fitHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~~~~ 271 (278)
++..+.+..++ ..++++++ ++||-.|. .+.||.+.|+|+|.++-..+.+. .++. |.++.+.. +.++
T Consensus 263 ~~v~l~~~lg~~~~~~l~~~ad--lvvt~SGg-v~~EA~alG~Pvv~~~~~ter~e----~v~~-G~~~lv~~---d~~~ 331 (385)
T 4hwg_A 263 DKIRFLPAFSFTDYVKLQMNAF--CILSDSGT-ITEEASILNLPALNIREAHERPE----GMDA-GTLIMSGF---KAER 331 (385)
T ss_dssp GGEEECCCCCHHHHHHHHHHCS--EEEECCTT-HHHHHHHTTCCEEECSSSCSCTH----HHHH-TCCEECCS---SHHH
T ss_pred CCEEEEcCCCHHHHHHHHHhCc--EEEECCcc-HHHHHHHcCCCEEEcCCCccchh----hhhc-CceEEcCC---CHHH
Confidence 45666555543 46888999 89998875 47999999999999986554222 2455 87776643 5777
Q ss_pred HHhhhh
Q 035856 272 VLQSLD 277 (278)
Q Consensus 272 l~~~i~ 277 (278)
|.++++
T Consensus 332 i~~ai~ 337 (385)
T 4hwg_A 332 VLQAVK 337 (385)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 777764
No 38
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=91.02 E-value=0.29 Score=42.02 Aligned_cols=63 Identities=19% Similarity=0.289 Sum_probs=45.5
Q ss_pred CeEEecCcchhhhc---ccccccEEEeeCCc---------hhHHHHHHhCcceeeccccCChhHHHHHHHHHhcceEEec
Q 035856 196 RGKIVLQAPQTQVL---GHFSIGVFVIHSGA---------NSVCESIANGVLMICRPFYGDHRMNARMVEEVWGIGVKVE 263 (278)
Q Consensus 196 ~~~v~~w~pq~~iL---~~~~v~~fitHgG~---------~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l~ 263 (278)
|+...+|+|+.++. +.++.+.+..-+.+ +-+.|++++|+|+|+.+ ...++..+.+. ++|+.++
T Consensus 215 nV~f~G~~~~~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~~----~~~~~~~v~~~-~~G~~~~ 289 (339)
T 3rhz_A 215 NVHKINYRPDEQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYKLGSFLAAGIPVIVQE----GIANQELIENN-GLGWIVK 289 (339)
T ss_dssp TEEEEECCCHHHHHHHHHTEEEEECCCCGGGHHHHTTCCCHHHHHHHHHTCCEEEET----TCTTTHHHHHH-TCEEEES
T ss_pred CEEEeCCCCHHHHHHHHHhCCEEEEECCCchhHHHHhcChHHHHHHHHcCCCEEEcc----ChhHHHHHHhC-CeEEEeC
Confidence 78888999998764 44454444322222 34789999999999876 34667778887 9999986
No 39
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=90.94 E-value=0.26 Score=42.76 Aligned_cols=75 Identities=15% Similarity=0.226 Sum_probs=49.6
Q ss_pred CeEEecCcch-hhhcccccccEEEe---e--CCchhHHHHHHhCcceeeccccCChhHHHHHHHHHhcceEEecCCCcCH
Q 035856 196 RGKIVLQAPQ-TQVLGHFSIGVFVI---H--SGANSVCESIANGVLMICRPFYGDHRMNARMVEEVWGIGVKVEGILLTK 269 (278)
Q Consensus 196 ~~~v~~w~pq-~~iL~~~~v~~fit---H--gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~~ 269 (278)
++.+.++..+ ..+++.++ +|+. . +|-++++||+++|+|+|+-|..++.......+.+. |.++.++ +.
T Consensus 261 ~v~~~~~~~dl~~~y~~aD--v~vl~ss~~e~gg~~~lEAmA~G~PVI~~~~~~~~~e~~~~~~~~-G~l~~~~----d~ 333 (374)
T 2xci_A 261 DVILVDRFGILKELYPVGK--IAIVGGTFVNIGGHNLLEPTCWGIPVIYGPYTHKVNDLKEFLEKE-GAGFEVK----NE 333 (374)
T ss_dssp SEEECCSSSCHHHHGGGEE--EEEECSSSSSSCCCCCHHHHTTTCCEEECSCCTTSHHHHHHHHHT-TCEEECC----SH
T ss_pred cEEEECCHHHHHHHHHhCC--EEEECCcccCCCCcCHHHHHHhCCCEEECCCccChHHHHHHHHHC-CCEEEeC----CH
Confidence 4444444332 45778888 5443 1 23477999999999999877767766666655555 8777763 45
Q ss_pred HHHHhhhh
Q 035856 270 SGVLQSLD 277 (278)
Q Consensus 270 ~~l~~~i~ 277 (278)
+++.+++.
T Consensus 334 ~~La~ai~ 341 (374)
T 2xci_A 334 TELVTKLT 341 (374)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 67776654
No 40
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=90.88 E-value=0.32 Score=42.33 Aligned_cols=73 Identities=14% Similarity=0.023 Sum_probs=50.1
Q ss_pred CCCeEEecCcc---h---hhhcccccccEEEeeC----CchhHHHHHHhCcceeeccccCChhHHHHHHHHHhcceEEec
Q 035856 194 SGRGKIVLQAP---Q---TQVLGHFSIGVFVIHS----GANSVCESIANGVLMICRPFYGDHRMNARMVEEVWGIGVKVE 263 (278)
Q Consensus 194 ~~~~~v~~w~p---q---~~iL~~~~v~~fitHg----G~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l~ 263 (278)
.+++.+.+|++ + ..++..++ +||.-. .-++++||+++|+|+|+.+. ..+...+.+. +.|..++
T Consensus 292 ~~~V~~~G~~~~~~~~~~~~~~~~ad--~~v~ps~~E~~~~~~lEAma~G~PvI~~~~----~g~~e~i~~~-~~g~l~~ 364 (416)
T 2x6q_A 292 DYDVKVLTNLIGVHAREVNAFQRASD--VILQMSIREGFGLTVTEAMWKGKPVIGRAV----GGIKFQIVDG-ETGFLVR 364 (416)
T ss_dssp CTTEEEEEGGGTCCHHHHHHHHHHCS--EEEECCSSCSSCHHHHHHHHTTCCEEEESC----HHHHHHCCBT-TTEEEES
T ss_pred CCcEEEecccCCCCHHHHHHHHHhCC--EEEECCCcCCCccHHHHHHHcCCCEEEccC----CCChhheecC-CCeEEEC
Confidence 46777778765 3 35677888 666543 34688999999999999764 3444555554 6788775
Q ss_pred CCCcCHHHHHhhhh
Q 035856 264 GILLTKSGVLQSLD 277 (278)
Q Consensus 264 ~~~~~~~~l~~~i~ 277 (278)
+.+++.++|.
T Consensus 365 ----d~~~la~~i~ 374 (416)
T 2x6q_A 365 ----DANEAVEVVL 374 (416)
T ss_dssp ----SHHHHHHHHH
T ss_pred ----CHHHHHHHHH
Confidence 5677777664
No 41
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=90.23 E-value=0.37 Score=43.92 Aligned_cols=44 Identities=14% Similarity=0.276 Sum_probs=33.9
Q ss_pred CCeEEecCcchh---hhcccccccEEE--e-eCCchhHHHHHHhCcceeecc
Q 035856 195 GRGKIVLQAPQT---QVLGHFSIGVFV--I-HSGANSVCESIANGVLMICRP 240 (278)
Q Consensus 195 ~~~~v~~w~pq~---~iL~~~~v~~fi--t-HgG~~s~~eal~~GvP~l~~P 240 (278)
+++.+.+++|+. .++..++ +|| + +|+-++++||+++|+|+|+.|
T Consensus 434 ~~v~~~g~~~~~~~~~~~~~ad--v~v~ps~~~~g~~~lEAma~G~Pvv~~~ 483 (568)
T 2vsy_A 434 QRLVFMPKLPHPQYLARYRHAD--LFLDTHPYNAHTTASDALWTGCPVLTTP 483 (568)
T ss_dssp GGEEEECCCCHHHHHHHGGGCS--EEECCSSSCCSHHHHHHHHTTCCEEBCC
T ss_pred hHEEeeCCCCHHHHHHHHhcCC--EEeeCCCCCCcHHHHHHHhCCCCEEecc
Confidence 677788999864 4578888 665 2 244578899999999999965
No 42
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=88.31 E-value=0.79 Score=39.78 Aligned_cols=71 Identities=11% Similarity=0.083 Sum_probs=48.3
Q ss_pred eEEecCcchhh---hcccccccEEEee---CC-chhHHHHHHhCcceeeccccCChhHHHHHHHHHhcceEEecCCCcCH
Q 035856 197 GKIVLQAPQTQ---VLGHFSIGVFVIH---SG-ANSVCESIANGVLMICRPFYGDHRMNARMVEEVWGIGVKVEGILLTK 269 (278)
Q Consensus 197 ~~v~~w~pq~~---iL~~~~v~~fitH---gG-~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~~ 269 (278)
..+.+|+++.+ ++..++ +||.- -| -++++||+++|+|+|+... ..... +.+. |.|..++.+ +.
T Consensus 313 ~~~~g~~~~~~~~~~~~~ad--v~v~ps~~e~~~~~~~EAma~G~Pvi~s~~----~~~~e-~~~~-~~g~~~~~~--d~ 382 (439)
T 3fro_A 313 KVITEMLSREFVRELYGSVD--FVIIPSYFEPFGLVALEAMCLGAIPIASAV----GGLRD-IITN-ETGILVKAG--DP 382 (439)
T ss_dssp EEECSCCCHHHHHHHHTTCS--EEEECBSCCSSCHHHHHHHHTTCEEEEESS----THHHH-HCCT-TTCEEECTT--CH
T ss_pred EEEcCCCCHHHHHHHHHHCC--EEEeCCCCCCccHHHHHHHHCCCCeEEcCC----CCcce-eEEc-CceEEeCCC--CH
Confidence 34458899864 678888 55532 23 3789999999999999754 33333 3334 788888764 57
Q ss_pred HHHHhhhh
Q 035856 270 SGVLQSLD 277 (278)
Q Consensus 270 ~~l~~~i~ 277 (278)
+++.++|.
T Consensus 383 ~~la~~i~ 390 (439)
T 3fro_A 383 GELANAIL 390 (439)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 77777764
No 43
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=87.74 E-value=0.51 Score=41.32 Aligned_cols=71 Identities=10% Similarity=0.033 Sum_probs=49.5
Q ss_pred CCCeEEecCcchh---hhcccccccEEEe-eCCc-hhHHHHH-------HhCcceeeccccCChhHHHHHHHHHhcceEE
Q 035856 194 SGRGKIVLQAPQT---QVLGHFSIGVFVI-HSGA-NSVCESI-------ANGVLMICRPFYGDHRMNARMVEEVWGIGVK 261 (278)
Q Consensus 194 ~~~~~v~~w~pq~---~iL~~~~v~~fit-HgG~-~s~~eal-------~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~ 261 (278)
.+++.+.+++|+. .++..+++.++-+ +-|+ ++++||+ ++|+|+|+... +.+. ..|..
T Consensus 264 ~~~V~f~G~~~~~~l~~~~~~adv~v~ps~~E~~~~~~lEAm~Kl~eYla~G~PVIas~~----------v~~~-~~G~l 332 (406)
T 2hy7_A 264 GDNVIVYGEMKHAQTIGYIKHARFGIAPYASEQVPVYLADSSMKLLQYDFFGLPAVCPNA----------VVGP-YKSRF 332 (406)
T ss_dssp CTTEEEECCCCHHHHHHHHHTCSEEECCBSCSCCCTTHHHHCHHHHHHHHHTCCEEEEGG----------GTCS-CSSEE
T ss_pred CCCEEEcCCCCHHHHHHHHHhcCEEEECCCcccCchHHHHHHHHHHHHhhCCCcEEEehh----------cccC-cceEE
Confidence 5677888999875 4678888333322 3344 6788999 99999999865 4444 56777
Q ss_pred -ecCCCcCHHHHHhhhh
Q 035856 262 -VEGILLTKSGVLQSLD 277 (278)
Q Consensus 262 -l~~~~~~~~~l~~~i~ 277 (278)
+..+ +.++++++|+
T Consensus 333 ~v~~~--d~~~la~ai~ 347 (406)
T 2hy7_A 333 GYTPG--NADSVIAAIT 347 (406)
T ss_dssp EECTT--CHHHHHHHHH
T ss_pred EeCCC--CHHHHHHHHH
Confidence 6654 5777877764
No 44
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=87.26 E-value=0.47 Score=43.99 Aligned_cols=44 Identities=16% Similarity=0.348 Sum_probs=33.9
Q ss_pred CCeEEecCcchhhhc---ccccccEEEe---eCCchhHHHHHHhCcceeecc
Q 035856 195 GRGKIVLQAPQTQVL---GHFSIGVFVI---HSGANSVCESIANGVLMICRP 240 (278)
Q Consensus 195 ~~~~v~~w~pq~~iL---~~~~v~~fit---HgG~~s~~eal~~GvP~l~~P 240 (278)
++..+.+.+|+.+.+ ..++ .|+. .+|.++++||+++|||+|+.+
T Consensus 499 ~Rv~F~g~~p~~e~la~y~~aD--IfLDpfpy~GgtTtlEALwmGVPVVTl~ 548 (631)
T 3q3e_A 499 DSATAHPHSPYHQYLRILHNCD--MMVNPFPFGNTNGIIDMVTLGLVGVCKT 548 (631)
T ss_dssp GGEEEECCCCHHHHHHHHHTCS--EEECCSSSCCSHHHHHHHHTTCCEEEEC
T ss_pred ccEEEcCCCCHHHHHHHHhcCc--EEEeCCcccCChHHHHHHHcCCCEEecc
Confidence 456666888876655 6677 5554 367799999999999999987
No 45
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=86.91 E-value=0.42 Score=45.40 Aligned_cols=48 Identities=19% Similarity=0.235 Sum_probs=36.7
Q ss_pred CCCeEEecCcchhhhc---ccccccEEEe---eCCchhHHHHHHhCcceeeccccCCh
Q 035856 194 SGRGKIVLQAPQTQVL---GHFSIGVFVI---HSGANSVCESIANGVLMICRPFYGDH 245 (278)
Q Consensus 194 ~~~~~v~~w~pq~~iL---~~~~v~~fit---HgG~~s~~eal~~GvP~l~~P~~~DQ 245 (278)
+++..+.+..|+.+-| ...+ .|+- .+|.+|++|||++|||+|++| |++
T Consensus 579 ~~r~~f~~~~~~~~~l~~~~~~D--i~LDt~p~~g~tT~~eal~~GvPvvt~~--g~~ 632 (723)
T 4gyw_A 579 QNRIIFSPVAPKEEHVRRGQLAD--VCLDTPLCNGHTTGMDVLWAGTPMVTMP--GET 632 (723)
T ss_dssp GGGEEEEECCCHHHHHHHGGGCS--EEECCSSSCCSHHHHHHHHTTCCEEBCC--CSS
T ss_pred cCeEEECCCCCHHHHHHHhCCCe--EEeCCCCcCCHHHHHHHHHcCCCEEEcc--CCC
Confidence 4566666888876655 3455 7775 788899999999999999998 554
No 46
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=86.72 E-value=0.9 Score=40.58 Aligned_cols=75 Identities=17% Similarity=0.184 Sum_probs=51.5
Q ss_pred CCCeEEecCcchh---hhcccc----cccEEEee---CCc-hhHHHHHHhCcceeeccccCChhHHHHHHHHHhcceEEe
Q 035856 194 SGRGKIVLQAPQT---QVLGHF----SIGVFVIH---SGA-NSVCESIANGVLMICRPFYGDHRMNARMVEEVWGIGVKV 262 (278)
Q Consensus 194 ~~~~~v~~w~pq~---~iL~~~----~v~~fitH---gG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l 262 (278)
.+++.+.+++|+. .++..+ + +||.- -|+ ++++||+++|+|+|+... .-....+.+. +.|..+
T Consensus 334 ~~~V~~~G~v~~~~~~~~~~~a~~~~d--v~v~pS~~Eg~~~~~lEAma~G~PvI~s~~----~g~~e~v~~~-~~g~l~ 406 (499)
T 2r60_A 334 RGKVSMFPLNSQQELAGCYAYLASKGS--VFALTSFYEPFGLAPVEAMASGLPAVVTRN----GGPAEILDGG-KYGVLV 406 (499)
T ss_dssp BTTEEEEECCSHHHHHHHHHHHHHTTC--EEEECCSCBCCCSHHHHHHHTTCCEEEESS----BHHHHHTGGG-TSSEEE
T ss_pred CceEEECCCCCHHHHHHHHHhcCcCCC--EEEECcccCCCCcHHHHHHHcCCCEEEecC----CCHHHHhcCC-ceEEEe
Confidence 4567788999875 467778 7 55532 243 688999999999999764 3344445554 578888
Q ss_pred cCCCcCHHHHHhhhh
Q 035856 263 EGILLTKSGVLQSLD 277 (278)
Q Consensus 263 ~~~~~~~~~l~~~i~ 277 (278)
+.+ +.+++.++|.
T Consensus 407 ~~~--d~~~la~~i~ 419 (499)
T 2r60_A 407 DPE--DPEDIARGLL 419 (499)
T ss_dssp CTT--CHHHHHHHHH
T ss_pred CCC--CHHHHHHHHH
Confidence 754 5667776654
No 47
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=84.62 E-value=0.35 Score=41.70 Aligned_cols=74 Identities=18% Similarity=0.120 Sum_probs=47.5
Q ss_pred CCeEEecCcch-hhhcccccccEEE----eeCCchhHHHHHHhCcceeeccccCChhHHHHHHHHHhcceEEecCCCcCH
Q 035856 195 GRGKIVLQAPQ-TQVLGHFSIGVFV----IHSGANSVCESIANGVLMICRPFYGDHRMNARMVEEVWGIGVKVEGILLTK 269 (278)
Q Consensus 195 ~~~~v~~w~pq-~~iL~~~~v~~fi----tHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~~ 269 (278)
++..+.++..+ ..++..++ +|| ..+.-++++||+++|+|+|+.+..+ ....+.+. +.|..++.+ +.
T Consensus 267 ~~v~~~g~~~~~~~~~~~ad--v~v~ps~~e~~~~~~~EAma~G~PvI~~~~~~----~~e~v~~~-~~g~~~~~~--d~ 337 (394)
T 2jjm_A 267 DRVLFLGKQDNVAELLAMSD--LMLLLSEKESFGLVLLEAMACGVPCIGTRVGG----IPEVIQHG-DTGYLCEVG--DT 337 (394)
T ss_dssp GGBCCCBSCSCTHHHHHTCS--EEEECCSCCSCCHHHHHHHHTTCCEEEECCTT----STTTCCBT-TTEEEECTT--CH
T ss_pred CeEEEeCchhhHHHHHHhCC--EEEeccccCCCchHHHHHHhcCCCEEEecCCC----hHHHhhcC-CceEEeCCC--CH
Confidence 45555555433 46788888 666 3344578999999999999987532 22233333 577777654 56
Q ss_pred HHHHhhhh
Q 035856 270 SGVLQSLD 277 (278)
Q Consensus 270 ~~l~~~i~ 277 (278)
+++.++|.
T Consensus 338 ~~la~~i~ 345 (394)
T 2jjm_A 338 TGVADQAI 345 (394)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 77776654
No 48
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=77.21 E-value=0.87 Score=39.99 Aligned_cols=73 Identities=12% Similarity=0.023 Sum_probs=47.4
Q ss_pred CCeEEecCcchhh---hcccccccEEEe--e-CCc-hhHHHHHHhCcceeeccccCChhHHHHHHHHHhcceEEecCCCc
Q 035856 195 GRGKIVLQAPQTQ---VLGHFSIGVFVI--H-SGA-NSVCESIANGVLMICRPFYGDHRMNARMVEEVWGIGVKVEGILL 267 (278)
Q Consensus 195 ~~~~v~~w~pq~~---iL~~~~v~~fit--H-gG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~ 267 (278)
++....+++|+.+ +++.++ +|+. . =|+ +.++||+++|+|+|+ -..+- ...+.+. ..|+-++.+
T Consensus 295 ~~v~f~G~~~~~~l~~~~~~ad--v~v~pS~~E~~g~~~lEAmA~G~PVV~-~~~g~----~e~v~~~-~~G~lv~~~-- 364 (413)
T 2x0d_A 295 IHLNSLGKLTLEDYADLLKRSS--IGISLMISPHPSYPPLEMAHFGLRVIT-NKYEN----KDLSNWH-SNIVSLEQL-- 364 (413)
T ss_dssp EEEEEEESCCHHHHHHHHHHCC--EEECCCSSSSCCSHHHHHHHTTCEEEE-ECBTT----BCGGGTB-TTEEEESSC--
T ss_pred CcEEEcCCCCHHHHHHHHHhCC--EEEEecCCCCCCcHHHHHHhCCCcEEE-eCCCc----chhhhcC-CCEEEeCCC--
Confidence 3455668988764 677888 5553 2 133 567999999999998 33221 1233333 478877764
Q ss_pred CHHHHHhhhh
Q 035856 268 TKSGVLQSLD 277 (278)
Q Consensus 268 ~~~~l~~~i~ 277 (278)
+.++++++|.
T Consensus 365 d~~~la~ai~ 374 (413)
T 2x0d_A 365 NPENIAETLV 374 (413)
T ss_dssp SHHHHHHHHH
T ss_pred CHHHHHHHHH
Confidence 6777887764
No 49
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=76.76 E-value=2.5 Score=31.17 Aligned_cols=41 Identities=17% Similarity=0.276 Sum_probs=30.0
Q ss_pred CeEEecCcchh---hhcccccccEEEe---eCC-chhHHHHHHhCc-ceeec
Q 035856 196 RGKIVLQAPQT---QVLGHFSIGVFVI---HSG-ANSVCESIANGV-LMICR 239 (278)
Q Consensus 196 ~~~v~~w~pq~---~iL~~~~v~~fit---HgG-~~s~~eal~~Gv-P~l~~ 239 (278)
+..+ +|+|+. .++..++ +||. +-| -++++||+++|+ |+|+.
T Consensus 57 ~v~~-g~~~~~~~~~~~~~ad--v~v~ps~~e~~~~~~~Eama~G~vPvi~~ 105 (166)
T 3qhp_A 57 KAEF-GFVNSNELLEILKTCT--LYVHAANVESEAIACLEAISVGIVPVIAN 105 (166)
T ss_dssp EEEC-CCCCHHHHHHHHTTCS--EEEECCCSCCCCHHHHHHHHTTCCEEEEC
T ss_pred eEEE-eecCHHHHHHHHHhCC--EEEECCcccCccHHHHHHHhcCCCcEEee
Confidence 5566 898875 4678888 5554 223 368999999996 99993
No 50
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=74.43 E-value=3.2 Score=35.75 Aligned_cols=43 Identities=12% Similarity=-0.057 Sum_probs=30.3
Q ss_pred eEEecCcchh---hhcccccccEEEe--e--CCchhHHHHHHhCcceeeccc
Q 035856 197 GKIVLQAPQT---QVLGHFSIGVFVI--H--SGANSVCESIANGVLMICRPF 241 (278)
Q Consensus 197 ~~v~~w~pq~---~iL~~~~v~~fit--H--gG~~s~~eal~~GvP~l~~P~ 241 (278)
..+.+|+|+. .++..++ +||. . |.-++++||+++|+|+|+...
T Consensus 256 v~~~g~~~~~~~~~~~~~ad--v~v~pS~~E~~~~~~lEAma~G~PvI~s~~ 305 (413)
T 3oy2_A 256 MINRTVLTDERVDMMYNACD--VIVNCSSGEGFGLCSAEGAVLGKPLIISAV 305 (413)
T ss_dssp EEECSCCCHHHHHHHHHHCS--EEEECCSCCSSCHHHHHHHTTTCCEEEECC
T ss_pred eeccCcCCHHHHHHHHHhCC--EEEeCCCcCCCCcHHHHHHHcCCCEEEcCC
Confidence 3444899865 4677888 5553 2 223589999999999999653
No 51
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=72.02 E-value=7.3 Score=33.70 Aligned_cols=39 Identities=26% Similarity=0.264 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHHcCCCCccEEEe--CCCchhHHHHHHHcCCCeEeEe
Q 035856 40 ENFKKGLDAAVSKTGRKISCFLT--DAFLTFSGEMARDMHIPWFPVF 84 (278)
Q Consensus 40 ~~l~~~l~~l~~~~~~~~d~vI~--D~~~~~~~~vA~~lgIP~v~~~ 84 (278)
..+.+.+++. +||+|++ |....++...|.++|||.+.+.
T Consensus 84 ~~l~~~l~~~------kPD~Vlv~gd~~~~~aalaA~~~~IPv~h~e 124 (385)
T 4hwg_A 84 EKVDEVLEKE------KPDAVLFYGDTNSCLSAIAAKRRKIPIFHME 124 (385)
T ss_dssp HHHHHHHHHH------CCSEEEEESCSGGGGGHHHHHHTTCCEEEES
T ss_pred HHHHHHHHhc------CCcEEEEECCchHHHHHHHHHHhCCCEEEEe
Confidence 3344555543 9999876 4445555788999999976553
No 52
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=69.81 E-value=7 Score=34.44 Aligned_cols=76 Identities=16% Similarity=0.156 Sum_probs=46.5
Q ss_pred CCCeE-EecCcch--hhhcccccccEEEeeC---C-chhHHHHHHhCcceeeccccCChhHHHHHHHHHh--------cc
Q 035856 194 SGRGK-IVLQAPQ--TQVLGHFSIGVFVIHS---G-ANSVCESIANGVLMICRPFYGDHRMNARMVEEVW--------GI 258 (278)
Q Consensus 194 ~~~~~-v~~w~pq--~~iL~~~~v~~fitHg---G-~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~--------g~ 258 (278)
.++.. +.++... ..++..++ +||.-. | -++++||+++|+|+|+... .-+...+.+.. +.
T Consensus 346 ~~~v~~~~g~~~~~~~~~~~~ad--v~v~pS~~E~~g~~~lEAma~G~PvI~s~~----gg~~e~v~~~~~~~~~~~~~~ 419 (485)
T 2qzs_A 346 PGQVGVQIGYHEAFSHRIMGGAD--VILVPSRFEPCGLTQLYGLKYGTLPLVRRT----GGLADTVSDCSLENLADGVAS 419 (485)
T ss_dssp TTTEEEEESCCHHHHHHHHHHCS--EEEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHCCBCCHHHHHTTCCC
T ss_pred CCcEEEeCCCCHHHHHHHHHhCC--EEEECCccCCCcHHHHHHHHCCCCEEECCC----CCccceeccCccccccccccc
Confidence 35664 4577333 25788888 555322 3 3678899999999999754 22333333200 36
Q ss_pred eEEecCCCcCHHHHHhhhh
Q 035856 259 GVKVEGILLTKSGVLQSLD 277 (278)
Q Consensus 259 G~~l~~~~~~~~~l~~~i~ 277 (278)
|..++.+ +.++++++|.
T Consensus 420 G~l~~~~--d~~~la~~i~ 436 (485)
T 2qzs_A 420 GFVFEDS--NAWSLLRAIR 436 (485)
T ss_dssp BEEECSS--SHHHHHHHHH
T ss_pred eEEECCC--CHHHHHHHHH
Confidence 7777654 5677776664
No 53
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=69.61 E-value=7.1 Score=34.42 Aligned_cols=74 Identities=15% Similarity=0.106 Sum_probs=46.4
Q ss_pred CCCeE-EecCcchh---hhcccccccEEEee----CCchhHHHHHHhCcceeeccccCChhHHHHHHHHHh---------
Q 035856 194 SGRGK-IVLQAPQT---QVLGHFSIGVFVIH----SGANSVCESIANGVLMICRPFYGDHRMNARMVEEVW--------- 256 (278)
Q Consensus 194 ~~~~~-v~~w~pq~---~iL~~~~v~~fitH----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~--------- 256 (278)
+++.. ..++ ++. .++..++ +||.- +.-++++||+++|+|+|+... .-....+. .-
T Consensus 345 ~~~v~~~~g~-~~~~~~~~~~~ad--v~v~pS~~E~~~~~~lEAma~G~PvI~s~~----gg~~e~v~-~~~~~~~~~~~ 416 (485)
T 1rzu_A 345 HGRVGVAIGY-NEPLSHLMQAGCD--AIIIPSRFEPCGLTQLYALRYGCIPVVART----GGLADTVI-DANHAALASKA 416 (485)
T ss_dssp TTTEEEEESC-CHHHHHHHHHHCS--EEEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHCC-BCCHHHHHTTC
T ss_pred CCcEEEecCC-CHHHHHHHHhcCC--EEEECcccCCCCHHHHHHHHCCCCEEEeCC----CChhheec-ccccccccccC
Confidence 35665 4577 443 5788888 56632 223689999999999999764 22333332 21
Q ss_pred cceEEecCCCcCHHHHHhhhh
Q 035856 257 GIGVKVEGILLTKSGVLQSLD 277 (278)
Q Consensus 257 g~G~~l~~~~~~~~~l~~~i~ 277 (278)
+.|..++.+ +.+++.++|.
T Consensus 417 ~~G~l~~~~--d~~~la~~i~ 435 (485)
T 1rzu_A 417 ATGVQFSPV--TLDGLKQAIR 435 (485)
T ss_dssp CCBEEESSC--SHHHHHHHHH
T ss_pred CcceEeCCC--CHHHHHHHHH
Confidence 367777654 5677776654
No 54
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=67.34 E-value=4 Score=39.25 Aligned_cols=73 Identities=12% Similarity=0.143 Sum_probs=46.1
Q ss_pred CCeEEec----Ccchhhhcc----cccccEEEee---CC-chhHHHHHHhCcceeeccccCChhHHHHHHHHHhcceEEe
Q 035856 195 GRGKIVL----QAPQTQVLG----HFSIGVFVIH---SG-ANSVCESIANGVLMICRPFYGDHRMNARMVEEVWGIGVKV 262 (278)
Q Consensus 195 ~~~~v~~----w~pq~~iL~----~~~v~~fitH---gG-~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~G~~l 262 (278)
+++.+.+ ++|+.++.. .++ +||.- -| -.+++||+++|+|+|+... .-....+.+. +.|..+
T Consensus 640 ~~V~flG~~~~~v~~~eL~~~~~~aaD--vfV~PS~~EgfglvllEAMA~G~PVIasd~----GG~~EiV~dg-~~Gllv 712 (816)
T 3s28_A 640 GQFRWISSQMDRVRNGELYRYICDTKG--AFVQPALYEAFGLTVVEAMTCGLPTFATCK----GGPAEIIVHG-KSGFHI 712 (816)
T ss_dssp BBEEEECCCCCHHHHHHHHHHHHHTTC--EEEECCSCBSSCHHHHHHHHTTCCEEEESS----BTHHHHCCBT-TTBEEE
T ss_pred CcEEEccCccccCCHHHHHHHHHhcCe--EEEECCCccCccHHHHHHHHcCCCEEEeCC----CChHHHHccC-CcEEEe
Confidence 4555556 444555544 345 56642 23 3689999999999999643 3344445554 678888
Q ss_pred cCCCcCHHHHHhhh
Q 035856 263 EGILLTKSGVLQSL 276 (278)
Q Consensus 263 ~~~~~~~~~l~~~i 276 (278)
+.+ +.++++++|
T Consensus 713 ~p~--D~e~LA~aI 724 (816)
T 3s28_A 713 DPY--HGDQAADTL 724 (816)
T ss_dssp CTT--SHHHHHHHH
T ss_pred CCC--CHHHHHHHH
Confidence 764 566666665
No 55
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=57.28 E-value=19 Score=31.03 Aligned_cols=29 Identities=21% Similarity=-0.010 Sum_probs=21.2
Q ss_pred CccEEEe--CCCc-hhHHHHHHHcCCCeEeEe
Q 035856 56 KISCFLT--DAFL-TFSGEMARDMHIPWFPVF 84 (278)
Q Consensus 56 ~~d~vI~--D~~~-~~~~~vA~~lgIP~v~~~ 84 (278)
+||+|++ |... ..+..+|+++|||.+.+.
T Consensus 111 kPDvVi~~g~~~~~~~~~~aa~~~~IPv~h~~ 142 (396)
T 3dzc_A 111 QPDVVLVHGDTATTFAASLAAYYQQIPVGHVE 142 (396)
T ss_dssp CCSEEEEETTSHHHHHHHHHHHTTTCCEEEET
T ss_pred CCCEEEEECCchhHHHHHHHHHHhCCCEEEEE
Confidence 9999987 4334 334678899999987653
No 56
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=55.07 E-value=20 Score=25.75 Aligned_cols=31 Identities=13% Similarity=0.280 Sum_probs=23.8
Q ss_pred CccEEEeCCCch--hHHHHHHHc-------CCCeEeEeCC
Q 035856 56 KISCFLTDAFLT--FSGEMARDM-------HIPWFPVFVA 86 (278)
Q Consensus 56 ~~d~vI~D~~~~--~~~~vA~~l-------gIP~v~~~~~ 86 (278)
+||+||.|..++ -|.++++++ ++|.+.++..
T Consensus 57 ~~DlillD~~MP~mdG~el~~~ir~~~~~~~ipvI~lTa~ 96 (134)
T 3to5_A 57 DFDFVVTDWNMPGMQGIDLLKNIRADEELKHLPVLMITAE 96 (134)
T ss_dssp CCSEEEEESCCSSSCHHHHHHHHHHSTTTTTCCEEEEESS
T ss_pred CCCEEEEcCCCCCCCHHHHHHHHHhCCCCCCCeEEEEECC
Confidence 899999999886 467777765 4888776543
No 57
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=53.66 E-value=14 Score=28.60 Aligned_cols=42 Identities=5% Similarity=-0.035 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHHcCCCCccEEEeCCCchhHHHHHHHcCCCeEeEeCCh
Q 035856 40 ENFKKGLDAAVSKTGRKISCFLTDAFLTFSGEMARDMHIPWFPVFVAM 87 (278)
Q Consensus 40 ~~l~~~l~~l~~~~~~~~d~vI~D~~~~~~~~vA~~lgIP~v~~~~~~ 87 (278)
+..++.++++.++ .+++||-|. ....+|+++|+|.+...+..
T Consensus 129 ~e~~~~i~~l~~~---G~~vvVG~~---~~~~~A~~~Gl~~vli~sg~ 170 (196)
T 2q5c_A 129 DEITTLISKVKTE---NIKIVVSGK---TVTDEAIKQGLYGETINSGE 170 (196)
T ss_dssp GGHHHHHHHHHHT---TCCEEEECH---HHHHHHHHTTCEEEECCCCH
T ss_pred HHHHHHHHHHHHC---CCeEEECCH---HHHHHHHHcCCcEEEEecCH
Confidence 4577788887654 899999986 34799999999999876533
No 58
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=52.37 E-value=13 Score=26.36 Aligned_cols=40 Identities=20% Similarity=0.231 Sum_probs=26.4
Q ss_pred HHHHHHHHHHcCCCCccEEEeCCCchh--HHHHHH---HcCCCeEeEe
Q 035856 42 FKKGLDAAVSKTGRKISCFLTDAFLTF--SGEMAR---DMHIPWFPVF 84 (278)
Q Consensus 42 l~~~l~~l~~~~~~~~d~vI~D~~~~~--~~~vA~---~lgIP~v~~~ 84 (278)
-.+.++.+.+ .+||+||.|..++- |.++++ +.++|.+.++
T Consensus 42 g~eAl~~~~~---~~~DlvllDi~mP~~~G~el~~~lr~~~ipvI~lT 86 (123)
T 2lpm_A 42 MQEALDIARK---GQFDIAIIDVNLDGEPSYPVADILAERNVPFIFAT 86 (123)
T ss_dssp HHHHHHHHHH---CCSSEEEECSSSSSCCSHHHHHHHHHTCCSSCCBC
T ss_pred HHHHHHHHHh---CCCCEEEEecCCCCCCHHHHHHHHHcCCCCEEEEe
Confidence 4555655433 38999999998763 445555 4578977553
No 59
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=50.71 E-value=27 Score=30.21 Aligned_cols=29 Identities=17% Similarity=-0.009 Sum_probs=21.1
Q ss_pred CccEEEe--CCCchh-HHHHHHHcCCCeEeEe
Q 035856 56 KISCFLT--DAFLTF-SGEMARDMHIPWFPVF 84 (278)
Q Consensus 56 ~~d~vI~--D~~~~~-~~~vA~~lgIP~v~~~ 84 (278)
+||+|++ |....+ +..+|+++|||.+.+.
T Consensus 114 kPD~Vi~~gd~~~~l~~~laA~~~~IPv~h~~ 145 (403)
T 3ot5_A 114 NPDIVLVHGDTTTSFAAGLATFYQQKMLGHVE 145 (403)
T ss_dssp CCSEEEEETTCHHHHHHHHHHHHTTCEEEEES
T ss_pred CCCEEEEECCchhHHHHHHHHHHhCCCEEEEE
Confidence 9999987 333333 5688999999987654
No 60
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=46.16 E-value=27 Score=27.49 Aligned_cols=43 Identities=12% Similarity=0.103 Sum_probs=30.5
Q ss_pred HHHHHHHHHHcCCCCccEEEeCCCchhHHHHHHHcCCCeEeEe
Q 035856 42 FKKGLDAAVSKTGRKISCFLTDAFLTFSGEMARDMHIPWFPVF 84 (278)
Q Consensus 42 l~~~l~~l~~~~~~~~d~vI~D~~~~~~~~vA~~lgIP~v~~~ 84 (278)
++.+++++.+..+..+.+||+|.--..+...|+++|||++.+.
T Consensus 19 l~all~~~~~~~~~eI~~Vis~~~~a~~~~~A~~~gIp~~~~~ 61 (215)
T 3tqr_A 19 LQAIIGAIQKGLAIEIRAVISNRADAYGLKRAQQADIPTHIIP 61 (215)
T ss_dssp HHHHHHHHHTTCSEEEEEEEESCTTCHHHHHHHHTTCCEEECC
T ss_pred HHHHHHHHHcCCCCEEEEEEeCCcchHHHHHHHHcCCCEEEeC
Confidence 5555555543222368899998766667889999999998764
No 61
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=43.82 E-value=25 Score=27.89 Aligned_cols=40 Identities=5% Similarity=0.165 Sum_probs=32.0
Q ss_pred hHHHHHHHHHHHHcCCCCccEEEeCCCchhHHHHHHHcCCCeEeEe
Q 035856 39 PENFKKGLDAAVSKTGRKISCFLTDAFLTFSGEMARDMHIPWFPVF 84 (278)
Q Consensus 39 ~~~l~~~l~~l~~~~~~~~d~vI~D~~~~~~~~vA~~lgIP~v~~~ 84 (278)
.+..+..+.++.++ .+++||-|. ....+|+++|+|.+...
T Consensus 140 ~ee~~~~i~~l~~~---G~~vVVG~~---~~~~~A~~~Gl~~vlI~ 179 (225)
T 2pju_A 140 EEDARGQINELKAN---GTEAVVGAG---LITDLAEEAGMTGIFIY 179 (225)
T ss_dssp HHHHHHHHHHHHHT---TCCEEEESH---HHHHHHHHTTSEEEESS
T ss_pred HHHHHHHHHHHHHC---CCCEEECCH---HHHHHHHHcCCcEEEEC
Confidence 34577778887654 899999986 34799999999999876
No 62
>3p9x_A Phosphoribosylglycinamide formyltransferase; structural genomics, PSI-biology, protein STRU initiative; 1.90A {Bacillus halodurans}
Probab=41.71 E-value=35 Score=26.75 Aligned_cols=43 Identities=12% Similarity=-0.007 Sum_probs=30.6
Q ss_pred HHHHHHHHHHc-CCCCccEEEeCCCchhHHHHHHHcCCCeEeEe
Q 035856 42 FKKGLDAAVSK-TGRKISCFLTDAFLTFSGEMARDMHIPWFPVF 84 (278)
Q Consensus 42 l~~~l~~l~~~-~~~~~d~vI~D~~~~~~~~vA~~lgIP~v~~~ 84 (278)
++.++++..+. ..-.+.+||+|---..+...|+++|||+..+.
T Consensus 16 l~ali~~~~~~~l~~eI~~Visn~~~a~v~~~A~~~gIp~~~~~ 59 (211)
T 3p9x_A 16 AEAIIQSQKAGQLPCEVALLITDKPGAKVVERVKVHEIPVCALD 59 (211)
T ss_dssp HHHHHHHHHTTCCSSEEEEEEESCSSSHHHHHHHTTTCCEEECC
T ss_pred HHHHHHHHHcCCCCcEEEEEEECCCCcHHHHHHHHcCCCEEEeC
Confidence 55566655332 12368899999766667899999999998764
No 63
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=41.33 E-value=24 Score=31.30 Aligned_cols=33 Identities=15% Similarity=0.262 Sum_probs=25.3
Q ss_pred HHHHHHcCCCCccEEEeCCCchhHHHHHHHcCCCeEeE
Q 035856 46 LDAAVSKTGRKISCFLTDAFLTFSGEMARDMHIPWFPV 83 (278)
Q Consensus 46 l~~l~~~~~~~~d~vI~D~~~~~~~~vA~~lgIP~v~~ 83 (278)
+++++++. +||++|... .+..+|+++|||++.+
T Consensus 367 le~~i~~~--~pDllig~~---~~~~~a~k~gip~~~~ 399 (458)
T 3pdi_B 367 LEHAARAG--QAQLVIGNS---HALASARRLGVPLLRA 399 (458)
T ss_dssp HHHHHHHH--TCSEEEECT---THHHHHHHTTCCEEEC
T ss_pred HHHHHHhc--CCCEEEECh---hHHHHHHHcCCCEEEe
Confidence 34444443 999999975 4678999999999865
No 64
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A
Probab=40.82 E-value=57 Score=24.69 Aligned_cols=42 Identities=5% Similarity=-0.077 Sum_probs=26.8
Q ss_pred cCcch-hhhcccccccEEEeeCCchhHH---HHHHhCcceeecccc
Q 035856 201 LQAPQ-TQVLGHFSIGVFVIHSGANSVC---ESIANGVLMICRPFY 242 (278)
Q Consensus 201 ~w~pq-~~iL~~~~v~~fitHgG~~s~~---eal~~GvP~l~~P~~ 242 (278)
+..++ +.++..-+-...+--||.||.. |++.+++|++.+|.+
T Consensus 95 ~~~~~Rk~~m~~~sda~IvlpGg~GTL~E~~~al~~~kpV~~l~~~ 140 (176)
T 2iz6_A 95 GLGSARDNINALSSNVLVAVGMGPGTAAEVALALKAKKPVVLLGTQ 140 (176)
T ss_dssp CCCSSSCCCCGGGCSEEEEESCCHHHHHHHHHHHHTTCCEEEESCC
T ss_pred CCHHHHHHHHHHhCCEEEEecCCccHHHHHHHHHHhCCcEEEEcCc
Confidence 44443 3344333334556678887765 457799999999984
No 65
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=40.74 E-value=43 Score=22.68 Aligned_cols=42 Identities=10% Similarity=0.060 Sum_probs=26.8
Q ss_pred HHHHHHHHHHcCCCCccEEEeCCCch--hHHHHHHHc-------CCCeEeEeCC
Q 035856 42 FKKGLDAAVSKTGRKISCFLTDAFLT--FSGEMARDM-------HIPWFPVFVA 86 (278)
Q Consensus 42 l~~~l~~l~~~~~~~~d~vI~D~~~~--~~~~vA~~l-------gIP~v~~~~~ 86 (278)
..+.++.+ ++ .+||+||.|..++ -|..+.+++ ++|.+.++..
T Consensus 35 ~~~al~~l-~~--~~~dlvllD~~~p~~~g~~~~~~l~~~~~~~~~pii~~s~~ 85 (122)
T 3gl9_A 35 GQIALEKL-SE--FTPDLIVLXIMMPVMDGFTVLKKLQEKEEWKRIPVIVLTAK 85 (122)
T ss_dssp HHHHHHHH-TT--BCCSEEEECSCCSSSCHHHHHHHHHTSTTTTTSCEEEEESC
T ss_pred HHHHHHHH-Hh--cCCCEEEEeccCCCCcHHHHHHHHHhcccccCCCEEEEecC
Confidence 34445544 22 3899999998765 356666654 5788876643
No 66
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=40.53 E-value=50 Score=27.34 Aligned_cols=30 Identities=20% Similarity=-0.030 Sum_probs=23.3
Q ss_pred CccEEEeCCCc--hhHHHHHHHcCCCeEeEeC
Q 035856 56 KISCFLTDAFL--TFSGEMARDMHIPWFPVFV 85 (278)
Q Consensus 56 ~~d~vI~D~~~--~~~~~vA~~lgIP~v~~~~ 85 (278)
+||+|+++... ..+..+|+.+|+|.+....
T Consensus 96 ~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~~ 127 (364)
T 1f0k_A 96 KPDVVLGMGGYVSGPGGLAAWSLGIPVVLHEQ 127 (364)
T ss_dssp CCSEEEECSSTTHHHHHHHHHHTTCCEEEEEC
T ss_pred CCCEEEEeCCcCchHHHHHHHHcCCCEEEEec
Confidence 99999998643 3466788899999996644
No 67
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=40.48 E-value=30 Score=28.96 Aligned_cols=37 Identities=24% Similarity=0.083 Sum_probs=24.1
Q ss_pred HHHHHHcCCCCccEEEe--CCCchh-HHHHHHHcCCCeEeEe
Q 035856 46 LDAAVSKTGRKISCFLT--DAFLTF-SGEMARDMHIPWFPVF 84 (278)
Q Consensus 46 l~~l~~~~~~~~d~vI~--D~~~~~-~~~vA~~lgIP~v~~~ 84 (278)
+.+++++. +||+|++ +....+ +..+|+.+|||.+.+.
T Consensus 83 l~~~l~~~--~pDvv~~~~~~~~~~~~~~~a~~~~ip~v~~~ 122 (376)
T 1v4v_A 83 AARALKEM--GADYVLVHGDTLTTFAVAWAAFLEGIPVGHVE 122 (376)
T ss_dssp HHHHHHHT--TCSEEEEESSCHHHHHHHHHHHHTTCCEEEET
T ss_pred HHHHHHHc--CCCEEEEeCChHHHHHHHHHHHHhCCCEEEEe
Confidence 33444443 9999998 322333 4678889999987553
No 68
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=36.42 E-value=62 Score=22.31 Aligned_cols=42 Identities=10% Similarity=0.152 Sum_probs=26.3
Q ss_pred HHHHHHHHHHcCCCCccEEEeCCCch--hHHHHHHHc-------CCCeEeEeCC
Q 035856 42 FKKGLDAAVSKTGRKISCFLTDAFLT--FSGEMARDM-------HIPWFPVFVA 86 (278)
Q Consensus 42 l~~~l~~l~~~~~~~~d~vI~D~~~~--~~~~vA~~l-------gIP~v~~~~~ 86 (278)
..+.++.+.+ .+||+||.|..++ -|..+++++ ++|.+.++..
T Consensus 37 ~~~al~~~~~---~~~dlvl~D~~lp~~~g~~~~~~lr~~~~~~~~pii~~t~~ 87 (136)
T 3t6k_A 37 GEEALQQIYK---NLPDALICDVLLPGIDGYTLCKRVRQHPLTKTLPILMLTAQ 87 (136)
T ss_dssp HHHHHHHHHH---SCCSEEEEESCCSSSCHHHHHHHHHHSGGGTTCCEEEEECT
T ss_pred HHHHHHHHHh---CCCCEEEEeCCCCCCCHHHHHHHHHcCCCcCCccEEEEecC
Confidence 3455555433 3899999998765 355555433 5788776553
No 69
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=35.84 E-value=49 Score=25.85 Aligned_cols=43 Identities=21% Similarity=0.144 Sum_probs=29.7
Q ss_pred HHHHHHHHHHcC-CCCccEEEeCCCchhHHHHHHHcCCCeEeEe
Q 035856 42 FKKGLDAAVSKT-GRKISCFLTDAFLTFSGEMARDMHIPWFPVF 84 (278)
Q Consensus 42 l~~~l~~l~~~~-~~~~d~vI~D~~~~~~~~vA~~lgIP~v~~~ 84 (278)
+...++.+.+.. +..+.+||++.--..+...|+++|||+..+.
T Consensus 17 ~~~~l~~l~~~~l~~~I~~Vit~~~~~~v~~~A~~~gIp~~~~~ 60 (212)
T 3av3_A 17 FQAIVDAAKRGDLPARVALLVCDRPGAKVIERAARENVPAFVFS 60 (212)
T ss_dssp HHHHHHHHHTTCCCEEEEEEEESSTTCHHHHHHHHTTCCEEECC
T ss_pred HHHHHHHHHhCCCCCeEEEEEeCCCCcHHHHHHHHcCCCEEEeC
Confidence 445566655431 2367789998655567789999999988653
No 70
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=35.02 E-value=39 Score=26.48 Aligned_cols=44 Identities=16% Similarity=-0.037 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHc-CCCCccEEEeCCCchhHHHHHHHcCCCeEeEe
Q 035856 41 NFKKGLDAAVSK-TGRKISCFLTDAFLTFSGEMARDMHIPWFPVF 84 (278)
Q Consensus 41 ~l~~~l~~l~~~-~~~~~d~vI~D~~~~~~~~vA~~lgIP~v~~~ 84 (278)
.++.+++++.+. .+..+.+||+|.--.-+...|+++|||+..+.
T Consensus 20 nl~all~~~~~~~l~~~I~~Visn~~~a~~l~~A~~~gIp~~~~~ 64 (209)
T 4ds3_A 20 NMEALIRAAQAPGFPAEIVAVFSDKAEAGGLAKAEAAGIATQVFK 64 (209)
T ss_dssp HHHHHHHHHTSTTCSEEEEEEEESCTTCTHHHHHHHTTCCEEECC
T ss_pred HHHHHHHHHHcCCCCcEEEEEEECCcccHHHHHHHHcCCCEEEeC
Confidence 355666665332 11267889998655567889999999998754
No 71
>1meo_A Phosophoribosylglycinamide formyltransferase; purine biosynthesis; 1.72A {Homo sapiens} SCOP: c.65.1.1 PDB: 1njs_A* 1rbm_A* 1rbq_A* 1rby_A* 1rbz_A* 1rc0_A* 1rc1_A* 1zly_A* 1zlx_A* 1mej_B 1men_A*
Probab=34.79 E-value=52 Score=25.66 Aligned_cols=43 Identities=12% Similarity=0.102 Sum_probs=30.5
Q ss_pred HHHHHHHHHHc-CCCCccEEEeCCCchhHHHHHHHcCCCeEeEe
Q 035856 42 FKKGLDAAVSK-TGRKISCFLTDAFLTFSGEMARDMHIPWFPVF 84 (278)
Q Consensus 42 l~~~l~~l~~~-~~~~~d~vI~D~~~~~~~~vA~~lgIP~v~~~ 84 (278)
|+.+++.+.+. .+..+.+||++.--..+...|+++|||++.+.
T Consensus 14 L~aLi~~~~~~~~~~~I~~Vvs~~~~~~~~~~A~~~gIp~~~~~ 57 (209)
T 1meo_A 14 LQALIDSTREPNSSAQIDIVISNKAAVAGLDKAERAGIPTRVIN 57 (209)
T ss_dssp HHHHHHHHHSTTCSCEEEEEEESSTTCHHHHHHHHTTCCEEECC
T ss_pred HHHHHHHHhcCCCCcEEEEEEeCCCChHHHHHHHHcCCCEEEEC
Confidence 44555554332 12467889999877778899999999998654
No 72
>2vqe_B 30S ribosomal protein S2; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: c.23.15.1 PDB: 1gix_E* 1hnw_B* 1hnx_B* 1hnz_B* 1hr0_B 1ibk_B* 1ibl_B* 1ibm_B 1j5e_B 1jgo_E* 1jgp_E* 1jgq_E* 1ml5_E* 1n32_B* 1n33_B* 1n34_B 1n36_B 1xmo_B* 1xmq_B* 1xnq_B* ...
Probab=34.69 E-value=51 Score=26.74 Aligned_cols=36 Identities=17% Similarity=0.130 Sum_probs=27.0
Q ss_pred CCccEE-EeCCCc-hhHHHHHHHcCCCeEeEeCChhhh
Q 035856 55 RKISCF-LTDAFL-TFSGEMARDMHIPWFPVFVAMPYN 90 (278)
Q Consensus 55 ~~~d~v-I~D~~~-~~~~~vA~~lgIP~v~~~~~~~~~ 90 (278)
..||+| |.|+.- ..+..-|.++|||.|.++-+.+.+
T Consensus 157 ~~Pdll~V~Dp~~e~~Ai~EA~~l~IPvIaivDTn~dp 194 (256)
T 2vqe_B 157 RLPDAIFVVDPTKEAIAVREARKLFIPVIALADTDSDP 194 (256)
T ss_dssp SCCSEEEESCTTTTHHHHHHHHHTTCCCEECCCTTSCG
T ss_pred cCCCEEEEeCCccchHHHHHHHHcCCCEEEEecCCCCc
Confidence 578877 567653 467788999999999987665543
No 73
>3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV}
Probab=32.41 E-value=55 Score=22.88 Aligned_cols=40 Identities=15% Similarity=0.203 Sum_probs=25.3
Q ss_pred HHHHHHHHHcCCCCccEEEeCCCchh--HHHHHHHc---------CCCeEeEeC
Q 035856 43 KKGLDAAVSKTGRKISCFLTDAFLTF--SGEMARDM---------HIPWFPVFV 85 (278)
Q Consensus 43 ~~~l~~l~~~~~~~~d~vI~D~~~~~--~~~vA~~l---------gIP~v~~~~ 85 (278)
.+.++.+. . .+||+||.|..++. |..+.+++ .+|.+.++.
T Consensus 48 ~~al~~~~-~--~~~dlvl~D~~mp~~~g~~~~~~lr~~~~~~~~~~pii~~s~ 98 (143)
T 3m6m_D 48 EQVLDAMA-E--EDYDAVIVDLHMPGMNGLDMLKQLRVMQASGMRYTPVVVLSA 98 (143)
T ss_dssp HHHHHHHH-H--SCCSEEEEESCCSSSCHHHHHHHHHHHHHTTCCCCCEEEEES
T ss_pred HHHHHHHh-c--CCCCEEEEeCCCCCCCHHHHHHHHHhchhccCCCCeEEEEeC
Confidence 44445443 3 38999999987653 55665544 277777654
No 74
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=31.77 E-value=50 Score=26.20 Aligned_cols=44 Identities=16% Similarity=0.158 Sum_probs=30.4
Q ss_pred HHHHHHHHHHHcC-CCCccEEEeCCCchhHHHHHHHcCCCeEeEe
Q 035856 41 NFKKGLDAAVSKT-GRKISCFLTDAFLTFSGEMARDMHIPWFPVF 84 (278)
Q Consensus 41 ~l~~~l~~l~~~~-~~~~d~vI~D~~~~~~~~vA~~lgIP~v~~~ 84 (278)
.+...++.+.+.. +..+.+||++.--..+...|+++|||.+.+.
T Consensus 35 ~~~~~l~~l~~~~~~~~I~~Vvt~~~~~~~~~~A~~~gIp~~~~~ 79 (229)
T 3auf_A 35 NLQAILDGCREGRIPGRVAVVISDRADAYGLERARRAGVDALHMD 79 (229)
T ss_dssp HHHHHHHHHHTTSSSEEEEEEEESSTTCHHHHHHHHTTCEEEECC
T ss_pred HHHHHHHHHHhCCCCCeEEEEEcCCCchHHHHHHHHcCCCEEEEC
Confidence 3556666665432 2357789998655567889999999988653
No 75
>1o97_C Electron transferring flavoprotein beta-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 PDB: 1o95_C* 1o96_A* 1o94_C* 3clr_C* 3cls_C* 3clt_C* 3clu_C*
Probab=31.10 E-value=65 Score=26.14 Aligned_cols=42 Identities=12% Similarity=0.077 Sum_probs=29.5
Q ss_pred HHHHHHHHHHcCCCCccEEEeCCCch------hHHHHHHHcCCCeEeEeC
Q 035856 42 FKKGLDAAVSKTGRKISCFLTDAFLT------FSGEMARDMHIPWFPVFV 85 (278)
Q Consensus 42 l~~~l~~l~~~~~~~~d~vI~D~~~~------~~~~vA~~lgIP~v~~~~ 85 (278)
+...|.+++++. +||+|++-.-.. .+..+|.+||+|.++..+
T Consensus 100 ~a~~La~~i~~~--~~dlVl~G~~s~d~~~~~v~p~lA~~L~~~~vt~v~ 147 (264)
T 1o97_C 100 VGRILTEVIKKE--APDMVFAGVQSSDQAYASTGISVASYLNWPHAAVVA 147 (264)
T ss_dssp HHHHHHHHHHHH--CCSEEEEESCCTTTCCCCHHHHHHHHHTCCEEEEEE
T ss_pred HHHHHHHHHHhc--CCCEEEEcCCccCCchhhHHHHHHHHhCCCcccceE
Confidence 334455555443 789998865432 678999999999998764
No 76
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=30.90 E-value=59 Score=27.12 Aligned_cols=30 Identities=20% Similarity=-0.045 Sum_probs=21.1
Q ss_pred CccEEEeCC--Cc-hhHHHHHHHcCCCeEeEeC
Q 035856 56 KISCFLTDA--FL-TFSGEMARDMHIPWFPVFV 85 (278)
Q Consensus 56 ~~d~vI~D~--~~-~~~~~vA~~lgIP~v~~~~ 85 (278)
+||+|++-. .. +.+..+|+.+|+|.+....
T Consensus 86 ~pDvv~~~~~~~~~~~~~~~a~~~~ip~v~~~~ 118 (384)
T 1vgv_A 86 KPDVVLVHGDTTTTLATSLAAFYQRIPVGHVEA 118 (384)
T ss_dssp CCSEEEEETTCHHHHHHHHHHHTTTCCEEEESC
T ss_pred CCCEEEEeCCchHHHHHHHHHHHHCCCEEEEec
Confidence 899999842 22 3345677889999987543
No 77
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=30.63 E-value=38 Score=26.64 Aligned_cols=41 Identities=27% Similarity=0.339 Sum_probs=27.8
Q ss_pred HHHHHHHHHHcCCCCccEEEeCCCchhHHHHHHHcCCCeEeE
Q 035856 42 FKKGLDAAVSKTGRKISCFLTDAFLTFSGEMARDMHIPWFPV 83 (278)
Q Consensus 42 l~~~l~~l~~~~~~~~d~vI~D~~~~~~~~vA~~lgIP~v~~ 83 (278)
++.+++++.+..+-.+.+||++.- ..+...|+++|||+...
T Consensus 26 l~all~~~~~~~~~eI~~Vis~~~-a~~~~~A~~~gIp~~~~ 66 (215)
T 3da8_A 26 LRSLLDAAVGDYPARVVAVGVDRE-CRAAEIAAEASVPVFTV 66 (215)
T ss_dssp HHHHHHHSSTTCSEEEEEEEESSC-CHHHHHHHHTTCCEEEC
T ss_pred HHHHHHHHhccCCCeEEEEEeCCc-hHHHHHHHHcCCCEEEe
Confidence 455555542211125788999975 45678999999999876
No 78
>1efv_B Electron transfer flavoprotein; electron transport, glutaric acidemia type II; HET: FAD AMP; 2.10A {Homo sapiens} SCOP: c.26.2.3 PDB: 1t9g_S* 2a1u_B* 2a1t_S*
Probab=29.77 E-value=71 Score=25.76 Aligned_cols=42 Identities=14% Similarity=-0.017 Sum_probs=29.2
Q ss_pred HHHHHHHHHHcCCCCccEEEeCCCch------hHHHHHHHcCCCeEeEeC
Q 035856 42 FKKGLDAAVSKTGRKISCFLTDAFLT------FSGEMARDMHIPWFPVFV 85 (278)
Q Consensus 42 l~~~l~~l~~~~~~~~d~vI~D~~~~------~~~~vA~~lgIP~v~~~~ 85 (278)
....|.+++++. +||+|++-.-.. .+..+|.+||+|.++..+
T Consensus 104 ~A~~La~~i~~~--~~dlVl~G~~s~d~d~~~v~p~lA~~L~~~~vt~v~ 151 (255)
T 1efv_B 104 VARVLAKLAEKE--KVDLVLLGKQAIDDDCNQTGQMTAGFLDWPQGTFAS 151 (255)
T ss_dssp HHHHHHHHHHHH--TCSEEEEESCCTTTCCCCHHHHHHHHHTCCEEEEEE
T ss_pred HHHHHHHHHHhc--CCCEEEEeCcccCCchhhHHHHHHHHhCCCcccceE
Confidence 334455555442 789998865432 678999999999998764
No 79
>4hn9_A Iron complex transport system substrate-binding P; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.85A {Eubacterium eligens}
Probab=29.52 E-value=56 Score=27.21 Aligned_cols=37 Identities=14% Similarity=0.048 Sum_probs=24.0
Q ss_pred HHHHHHcCCCCccEEEeCCCchhHHHHHHHcCCCeEeEeC
Q 035856 46 LDAAVSKTGRKISCFLTDAFLTFSGEMARDMHIPWFPVFV 85 (278)
Q Consensus 46 l~~l~~~~~~~~d~vI~D~~~~~~~~vA~~lgIP~v~~~~ 85 (278)
++++++- +||+||......-...--+++|||.+.+..
T Consensus 109 ~E~i~al---~PDLIi~~~~~~~~~~~L~~~gipvv~~~~ 145 (335)
T 4hn9_A 109 TEACVAA---TPDVVFLPMKLKKTADTLESLGIKAVVVNP 145 (335)
T ss_dssp HHHHHHT---CCSEEEEEGGGHHHHHHHHHTTCCEEEECC
T ss_pred HHHHHhc---CCCEEEEeCcchhHHHHHHHcCCCEEEEcC
Confidence 5666553 999999865322223334577999998754
No 80
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=29.33 E-value=72 Score=24.88 Aligned_cols=43 Identities=16% Similarity=0.197 Sum_probs=30.3
Q ss_pred HHHHHHHHHHcC-CCCccEEEeCCCchhHHHHHHHcCCCeEeEe
Q 035856 42 FKKGLDAAVSKT-GRKISCFLTDAFLTFSGEMARDMHIPWFPVF 84 (278)
Q Consensus 42 l~~~l~~l~~~~-~~~~d~vI~D~~~~~~~~vA~~lgIP~v~~~ 84 (278)
++.+++.+.+.. +..+.+||++.--..+...|+++|||.+.+.
T Consensus 14 l~ali~~~~~~~~~~~i~~Vis~~~~~~~~~~A~~~gIp~~~~~ 57 (212)
T 1jkx_A 14 LQAIIDACKTNKIKGTVRAVFSNKADAFGLERARQAGIATHTLI 57 (212)
T ss_dssp HHHHHHHHHTTSSSSEEEEEEESCTTCHHHHHHHHTTCEEEECC
T ss_pred HHHHHHHHHcCCCCceEEEEEeCCCchHHHHHHHHcCCcEEEeC
Confidence 555566654331 2357889999766668899999999988753
No 81
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=28.49 E-value=54 Score=30.86 Aligned_cols=46 Identities=17% Similarity=0.068 Sum_probs=33.0
Q ss_pred CCCeEEe---cCcchh---------hhcccccccEEEee---CCc-hhHHHHHHhCcceeeccc
Q 035856 194 SGRGKIV---LQAPQT---------QVLGHFSIGVFVIH---SGA-NSVCESIANGVLMICRPF 241 (278)
Q Consensus 194 ~~~~~v~---~w~pq~---------~iL~~~~v~~fitH---gG~-~s~~eal~~GvP~l~~P~ 241 (278)
.++++|+ .|++.. ++++.++ +||.- =|+ .+.+||+++|+|+|+--.
T Consensus 489 ~drVKVIf~P~~L~~~d~lf~~d~~~~~~~ad--vfV~PS~~EgfGl~~LEAmA~G~PvI~s~~ 550 (725)
T 3nb0_A 489 SDRVKMIFHPEFLNANNPILGLDYDEFVRGCH--LGVFPSYYEPWGYTPAECTVMGVPSITTNV 550 (725)
T ss_dssp TCSEEEEECCSCCCTTCSSSCCCHHHHHHHCS--EEECCCSSBSSCHHHHHHHHTTCCEEEETT
T ss_pred CCceeEEEeccccCCCCccchhHHHHHHhhce--EEEeccccCCCCHHHHHHHHcCCCEEEeCC
Confidence 4566554 688774 4788888 55543 234 588999999999999654
No 82
>2a9o_A Response regulator; essential protein, YYCF/YYCG homolog, signaling protein; 1.65A {Streptococcus pneumoniae} SCOP: c.23.1.1 PDB: 1nxo_A 1nxs_A 1nxv_A 1nxw_A 1nxx_A 1nxp_A 2a9p_A 2a9q_A 1nxt_A* 2a9r_A*
Probab=27.72 E-value=1.2e+02 Score=19.79 Aligned_cols=31 Identities=16% Similarity=0.189 Sum_probs=21.0
Q ss_pred CccEEEeCCCch--hHHHHHHH----cCCCeEeEeCC
Q 035856 56 KISCFLTDAFLT--FSGEMARD----MHIPWFPVFVA 86 (278)
Q Consensus 56 ~~d~vI~D~~~~--~~~~vA~~----lgIP~v~~~~~ 86 (278)
+||++|.|..++ .+..++++ -.+|.+.++..
T Consensus 45 ~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~ii~~s~~ 81 (120)
T 2a9o_A 45 QPDIIILDLMLPEIDGLEVAKTIRKTSSVPILMLSAK 81 (120)
T ss_dssp CCSEEEECSSCSSSCHHHHHHHHHHHCCCCEEEEESC
T ss_pred CCCEEEEeccCCCCCHHHHHHHHHhCCCCCEEEEecC
Confidence 799999998664 34444443 36887776554
No 83
>1tmy_A CHEY protein, TMY; chemotaxis, phosphoryl transfer, signal transduction; 1.90A {Thermotoga maritima} SCOP: c.23.1.1 PDB: 2tmy_A 3tmy_A 4tmy_A 1u0s_Y
Probab=27.69 E-value=1.1e+02 Score=20.01 Aligned_cols=41 Identities=5% Similarity=0.012 Sum_probs=25.2
Q ss_pred HHHHHHHHHcCCCCccEEEeCCCch--hHHHHHHHc-----CCCeEeEeCC
Q 035856 43 KKGLDAAVSKTGRKISCFLTDAFLT--FSGEMARDM-----HIPWFPVFVA 86 (278)
Q Consensus 43 ~~~l~~l~~~~~~~~d~vI~D~~~~--~~~~vA~~l-----gIP~v~~~~~ 86 (278)
.+.++.+.+. +||+||.|..++ -|..+.+++ ++|.+.++..
T Consensus 37 ~~a~~~~~~~---~~dlil~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~ 84 (120)
T 1tmy_A 37 REAVEKYKEL---KPDIVTMDITMPEMNGIDAIKEIMKIDPNAKIIVCSAM 84 (120)
T ss_dssp HHHHHHHHHH---CCSEEEEECSCGGGCHHHHHHHHHHHCTTCCEEEEECT
T ss_pred HHHHHHHHhc---CCCEEEEeCCCCCCcHHHHHHHHHhhCCCCeEEEEeCC
Confidence 4445544332 799999998765 355555543 5777766543
No 84
>3u7q_A Nitrogenase molybdenum-iron protein alpha chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1g21_A* 1g20_A* 1fp4_A* 1m1n_A* 1l5h_A* 1m1y_A* 1m34_A* 1n2c_A* 2afh_A* 2afi_A* 2afk_A* 2min_A* 3min_A* 3k1a_A* 1h1l_A* 1qgu_A* 1qh1_A* 1qh8_A*
Probab=27.53 E-value=63 Score=28.88 Aligned_cols=25 Identities=16% Similarity=0.097 Sum_probs=21.6
Q ss_pred CccEEEeCCCchhHHHHHHHcCCCeEeE
Q 035856 56 KISCFLTDAFLTFSGEMARDMHIPWFPV 83 (278)
Q Consensus 56 ~~d~vI~D~~~~~~~~vA~~lgIP~v~~ 83 (278)
+||++|... .+..+|+++|||++.+
T Consensus 417 ~pDL~ig~~---~~~~ia~k~gIP~~~~ 441 (492)
T 3u7q_A 417 KPDLIGSGI---KEKFIFQKMGIPFREM 441 (492)
T ss_dssp CCSEEEECH---HHHHHHHHTTCCEEES
T ss_pred CCcEEEeCc---chhHHHHHcCCCEEec
Confidence 999999964 5679999999999964
No 85
>3c3m_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.70A {Methanoculleus marisnigri JR1}
Probab=27.46 E-value=1e+02 Score=21.09 Aligned_cols=41 Identities=17% Similarity=0.139 Sum_probs=25.2
Q ss_pred HHHHHHHHHcCCCCccEEEeCCCch--hHHHHHHHc-------CCCeEeEeCC
Q 035856 43 KKGLDAAVSKTGRKISCFLTDAFLT--FSGEMARDM-------HIPWFPVFVA 86 (278)
Q Consensus 43 ~~~l~~l~~~~~~~~d~vI~D~~~~--~~~~vA~~l-------gIP~v~~~~~ 86 (278)
.+.++.+. . .+||+||.|..++ -|..+.+++ ++|.+.++..
T Consensus 37 ~~al~~l~-~--~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~ls~~ 86 (138)
T 3c3m_A 37 EECLEALN-A--TPPDLVLLDIMMEPMDGWETLERIKTDPATRDIPVLMLTAK 86 (138)
T ss_dssp HHHHHHHH-H--SCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTSCEEEEESS
T ss_pred HHHHHHHh-c--cCCCEEEEeCCCCCCCHHHHHHHHHcCcccCCCCEEEEECC
Confidence 44444443 3 2799999998764 355555543 5777776543
No 86
>3cg0_A Response regulator receiver modulated diguanylate with PAS/PAC sensor; signal receiver domain, diguanylate cyclase; 2.15A {Desulfovibrio desulfuricans subsp}
Probab=27.32 E-value=98 Score=21.04 Aligned_cols=42 Identities=17% Similarity=0.106 Sum_probs=26.3
Q ss_pred HHHHHHHHHHcCCCCccEEEeCCCch---hHHHHHHH----cCCCeEeEeCC
Q 035856 42 FKKGLDAAVSKTGRKISCFLTDAFLT---FSGEMARD----MHIPWFPVFVA 86 (278)
Q Consensus 42 l~~~l~~l~~~~~~~~d~vI~D~~~~---~~~~vA~~----lgIP~v~~~~~ 86 (278)
..+.++.+.+. +||+||.|..+. .+..+.++ -++|.+.++..
T Consensus 43 ~~~a~~~~~~~---~~dlii~d~~~~~~~~g~~~~~~l~~~~~~~ii~ls~~ 91 (140)
T 3cg0_A 43 GEEAVRCAPDL---RPDIALVDIMLCGALDGVETAARLAAGCNLPIIFITSS 91 (140)
T ss_dssp HHHHHHHHHHH---CCSEEEEESSCCSSSCHHHHHHHHHHHSCCCEEEEECC
T ss_pred HHHHHHHHHhC---CCCEEEEecCCCCCCCHHHHHHHHHhCCCCCEEEEecC
Confidence 44555554332 799999997653 34444444 37888877653
No 87
>2etv_A Iron(III) ABC transporter, periplasmic iron-bindi protein, putative; periplasmic iron-binding protein, structural genomics; HET: MLY; 1.70A {Thermotoga maritima} SCOP: c.92.2.4
Probab=27.13 E-value=63 Score=27.09 Aligned_cols=38 Identities=8% Similarity=0.099 Sum_probs=24.8
Q ss_pred HHHHHHHcCCCCccEEEeCCCch-hHHHHHHHcCCCeEeEeC
Q 035856 45 GLDAAVSKTGRKISCFLTDAFLT-FSGEMARDMHIPWFPVFV 85 (278)
Q Consensus 45 ~l~~l~~~~~~~~d~vI~D~~~~-~~~~vA~~lgIP~v~~~~ 85 (278)
-++++++- +||+||...... -.....+++|||++.+..
T Consensus 88 n~E~Ilal---~PDLIi~~~~~~~~~~~~~~~~GiPvv~~~~ 126 (346)
T 2etv_A 88 DLESLITL---QPDVVFITYVDRXTAXDIQEXTGIPVVVLSY 126 (346)
T ss_dssp CHHHHHHH---CCSEEEEESCCHHHHHHHHHHHTSCEEEECC
T ss_pred CHHHHhcC---CCCEEEEeCCccchHHHHHHhcCCcEEEEec
Confidence 35565553 899999865321 123455788999998753
No 88
>1efp_B ETF, protein (electron transfer flavoprotein); electron transport, glutaric acidemia type II; HET: FAD AMP; 2.60A {Paracoccus denitrificans} SCOP: c.26.2.3
Probab=27.05 E-value=70 Score=25.74 Aligned_cols=30 Identities=3% Similarity=-0.156 Sum_probs=21.8
Q ss_pred CccEEEeCCCc------hhHHHHHHHcCCCeEeEeC
Q 035856 56 KISCFLTDAFL------TFSGEMARDMHIPWFPVFV 85 (278)
Q Consensus 56 ~~d~vI~D~~~------~~~~~vA~~lgIP~v~~~~ 85 (278)
+||+|++-.-. -.+..+|.+||+|.++..+
T Consensus 113 ~~dlVl~G~~s~d~~~~~v~p~lA~~L~~~~vt~v~ 148 (252)
T 1efp_B 113 GTELIIAGKQAIDNDMNATGQMLAAILGWAQATFAS 148 (252)
T ss_dssp TCSEEEEESCCTTTCCCCHHHHHHHHHTCEEEEEEE
T ss_pred CCCEEEEcCCccCCchhhHHHHHHHHhCCCccccEE
Confidence 68888876533 2577888888888887754
No 89
>1lt8_A Betaine-homocysteine methyltransferase; homocysteine metabolism, homocysteinemia, zinc, thiol alkyl transfer; HET: CBH CIT; 2.05A {Homo sapiens} SCOP: c.1.26.1 PDB: 1lt7_A* 1umy_A
Probab=26.89 E-value=1.4e+02 Score=25.95 Aligned_cols=46 Identities=13% Similarity=0.166 Sum_probs=33.7
Q ss_pred hHHHHHHHHHHHHcCCCCccEEEeCCCch-----hHHHHHHHcCCCeEeEeCCh
Q 035856 39 PENFKKGLDAAVSKTGRKISCFLTDAFLT-----FSGEMARDMHIPWFPVFVAM 87 (278)
Q Consensus 39 ~~~l~~~l~~l~~~~~~~~d~vI~D~~~~-----~~~~vA~~lgIP~v~~~~~~ 87 (278)
.+.+++.++.+++. .+|+++.+.+.. ++..++++.++|++...+..
T Consensus 138 ~~~~~eqi~~L~~~---GvDlll~ETi~~~~Eakaa~~a~~~~~lPv~iS~T~~ 188 (406)
T 1lt8_A 138 KKVFLQQLEVFMKK---NVDFLIAEYFEHVEEAVWAVETLIASGKPVAATMAIG 188 (406)
T ss_dssp HHHHHHHHHHHHHH---TCSEEEECCCSCHHHHHHHHHHHGGGTSCEEEEECCB
T ss_pred HHHHHHHHHHHhhC---CCCEEEEcccCCHHHHHHHHHHHHHhCCcEEEEEEEC
Confidence 34566777777654 899999998764 34566777899988877654
No 90
>3pdi_A Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=26.51 E-value=41 Score=29.99 Aligned_cols=26 Identities=8% Similarity=0.135 Sum_probs=21.8
Q ss_pred CccEEEeCCCchhHHHHHHHcCCCeEeEe
Q 035856 56 KISCFLTDAFLTFSGEMARDMHIPWFPVF 84 (278)
Q Consensus 56 ~~d~vI~D~~~~~~~~vA~~lgIP~v~~~ 84 (278)
+||++|... .+..+|+++|||++.+.
T Consensus 401 ~pDL~ig~~---~~~~~a~k~gIP~~~~~ 426 (483)
T 3pdi_A 401 QADILIAGG---RNMYTALKGRVPFLDIN 426 (483)
T ss_dssp TCSEEECCG---GGHHHHHHTTCCBCCCC
T ss_pred CCCEEEECC---chhHHHHHcCCCEEEec
Confidence 999999864 56789999999998654
No 91
>3bbn_B Ribosomal protein S2; small ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea} SCOP: i.1.1.1
Probab=26.43 E-value=48 Score=26.42 Aligned_cols=34 Identities=9% Similarity=-0.124 Sum_probs=25.5
Q ss_pred CccEE-EeCCCc-hhHHHHHHHcCCCeEeEeCChhh
Q 035856 56 KISCF-LTDAFL-TFSGEMARDMHIPWFPVFVAMPY 89 (278)
Q Consensus 56 ~~d~v-I~D~~~-~~~~~vA~~lgIP~v~~~~~~~~ 89 (278)
.||+| |.|+.- ..+..-|.++|||.+.++-+.+.
T Consensus 157 ~Pdll~v~Dp~~e~~ai~EA~~l~IPvIaivDTn~d 192 (231)
T 3bbn_B 157 LPDIVIIVDQQEEYTALRECITLGIPTICLIDTNCN 192 (231)
T ss_dssp CCSEEEESCTTTTHHHHHHHHTTTCCEEECCCSSSC
T ss_pred CCCEEEEeCCccccHHHHHHHHhCCCEEEEecCCCC
Confidence 58877 567643 45778899999999998765543
No 92
>3h1g_A Chemotaxis protein CHEY homolog; sulfate-bound CHEY, cytoplasm, flagellar rotatio magnesium, metal-binding, phosphoprotein; 1.70A {Helicobacter pylori} SCOP: c.23.1.1 PDB: 3gwg_A 3h1e_A 3h1f_A
Probab=26.27 E-value=1.4e+02 Score=19.95 Aligned_cols=42 Identities=10% Similarity=0.162 Sum_probs=25.6
Q ss_pred HHHHHHHHHcCCCCccEEEeCCCch--hHHHHHHHc-------CCCeEeEeCC
Q 035856 43 KKGLDAAVSKTGRKISCFLTDAFLT--FSGEMARDM-------HIPWFPVFVA 86 (278)
Q Consensus 43 ~~~l~~l~~~~~~~~d~vI~D~~~~--~~~~vA~~l-------gIP~v~~~~~ 86 (278)
.+.++.+.+. .++|+||.|..++ -|..+++++ ++|.+.++..
T Consensus 40 ~~a~~~~~~~--~~~dlvi~D~~~p~~~g~~~~~~lr~~~~~~~~pii~~s~~ 90 (129)
T 3h1g_A 40 VEAWEKLDAN--ADTKVLITDWNMPEMNGLDLVKKVRSDSRFKEIPIIMITAE 90 (129)
T ss_dssp HHHHHHHHHC--TTCCEEEECSCCSSSCHHHHHHHHHTSTTCTTCCEEEEESC
T ss_pred HHHHHHHHhC--CCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCCeEEEEeCC
Confidence 3444444333 3799999998765 355555543 4677776543
No 93
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=26.12 E-value=97 Score=24.18 Aligned_cols=42 Identities=14% Similarity=0.116 Sum_probs=29.4
Q ss_pred HHHHHHHHHHcCCC--CccEEEeCCCchhHHHHHHHcCCCeEeEe
Q 035856 42 FKKGLDAAVSKTGR--KISCFLTDAFLTFSGEMARDMHIPWFPVF 84 (278)
Q Consensus 42 l~~~l~~l~~~~~~--~~d~vI~D~~~~~~~~vA~~lgIP~v~~~ 84 (278)
+...++.+.+. +. .+.+||++.--..+...|+++|||...+.
T Consensus 15 ~~~~l~~l~~~-~~~~~i~~Vvs~~~~~~~~~~A~~~gIp~~~~~ 58 (216)
T 2ywr_A 15 LQAIIDAIESG-KVNASIELVISDNPKAYAIERCKKHNVECKVIQ 58 (216)
T ss_dssp HHHHHHHHHTT-SSCEEEEEEEESCTTCHHHHHHHHHTCCEEECC
T ss_pred HHHHHHHHHhC-CCCCeEEEEEeCCCChHHHHHHHHcCCCEEEeC
Confidence 44556665443 12 56788998755667899999999998654
No 94
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=25.84 E-value=1.1e+02 Score=20.33 Aligned_cols=41 Identities=15% Similarity=0.198 Sum_probs=25.1
Q ss_pred HHHHHHHHHHcCCCCccEEEeCCCch--hHHHHHHH----cCCCeEeEeC
Q 035856 42 FKKGLDAAVSKTGRKISCFLTDAFLT--FSGEMARD----MHIPWFPVFV 85 (278)
Q Consensus 42 l~~~l~~l~~~~~~~~d~vI~D~~~~--~~~~vA~~----lgIP~v~~~~ 85 (278)
..+.++.+ ++ .+||+||.|..++ -|..+.++ .++|.+.++.
T Consensus 35 ~~~al~~~-~~--~~~dlii~D~~~p~~~g~~~~~~lr~~~~~~ii~~t~ 81 (120)
T 3f6p_A 35 GNEAVEMV-EE--LQPDLILLDIMLPNKDGVEVCREVRKKYDMPIIMLTA 81 (120)
T ss_dssp HHHHHHHH-HT--TCCSEEEEETTSTTTHHHHHHHHHHTTCCSCEEEEEE
T ss_pred HHHHHHHH-hh--CCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCEEEEEC
Confidence 34445544 33 3899999998765 34455443 3678776654
No 95
>3a10_A Response regulator; phosphoacceptor, signaling protein; HET: MSE PG4; 1.63A {Thermotoga maritima} PDB: 3a0r_B* 3a0u_A*
Probab=25.83 E-value=1.4e+02 Score=19.37 Aligned_cols=41 Identities=12% Similarity=0.067 Sum_probs=24.8
Q ss_pred HHHHHHHHHcCCCCccEEEeCCCch--hHHHHHHHc-----CCCeEeEeCC
Q 035856 43 KKGLDAAVSKTGRKISCFLTDAFLT--FSGEMARDM-----HIPWFPVFVA 86 (278)
Q Consensus 43 ~~~l~~l~~~~~~~~d~vI~D~~~~--~~~~vA~~l-----gIP~v~~~~~ 86 (278)
.+.++.+.+ .+||+||.|..++ .+..+.+++ ++|.+.++..
T Consensus 35 ~~a~~~~~~---~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~ 82 (116)
T 3a10_A 35 EEALKKFFS---GNYDLVILDIEMPGISGLEVAGEIRKKKKDAKIILLTAY 82 (116)
T ss_dssp HHHHHHHHH---SCCSEEEECSCCSSSCHHHHHHHHHHHCTTCCEEEEESC
T ss_pred HHHHHHHhc---CCCCEEEEECCCCCCCHHHHHHHHHccCCCCeEEEEECC
Confidence 444444433 3799999998664 345554433 4777776543
No 96
>2w36_A Endonuclease V; hypoxanthine, endonuclease, endonucleasev, hydrolase, inosine, DNA damage, DNA repair; HET: BRU; 2.10A {Thermotoga maritima} PDB: 2w35_A 3hd0_A
Probab=24.65 E-value=83 Score=24.92 Aligned_cols=35 Identities=20% Similarity=0.052 Sum_probs=24.7
Q ss_pred HHcCCCCccEEEeCCCchh-------HHHHHHHcCCCeEeEe
Q 035856 50 VSKTGRKISCFLTDAFLTF-------SGEMARDMHIPWFPVF 84 (278)
Q Consensus 50 ~~~~~~~~d~vI~D~~~~~-------~~~vA~~lgIP~v~~~ 84 (278)
++....+||+|++|-.-.. +..+.-.+|+|++-..
T Consensus 97 l~~L~~~PdlllvDG~Gi~HpR~~GlA~HlGv~l~~PtIGVA 138 (225)
T 2w36_A 97 WEKLRTKPDVVVFDGQGLAHPRKLGIASHMGLFIEIPTIGVA 138 (225)
T ss_dssp HTTCCSCCSEEEEESCSSSSTTSCCHHHHHHHHHTSCEEEEE
T ss_pred HHhcCCCCCEEEEeCeEEEcCCCCCchhhhhhhhCCCEEEEE
Confidence 3444568999999986443 4456666789999764
No 97
>3b2n_A Uncharacterized protein Q99UF4; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.04A {Staphylococcus aureus}
Probab=24.57 E-value=1.1e+02 Score=20.69 Aligned_cols=40 Identities=10% Similarity=0.036 Sum_probs=24.6
Q ss_pred HHHHHHHHHcCCCCccEEEeCCCch--hHHHHHHHc-----CCCeEeEeC
Q 035856 43 KKGLDAAVSKTGRKISCFLTDAFLT--FSGEMARDM-----HIPWFPVFV 85 (278)
Q Consensus 43 ~~~l~~l~~~~~~~~d~vI~D~~~~--~~~~vA~~l-----gIP~v~~~~ 85 (278)
.+.++.+.+. +||+||.|..++ -|..+.+++ ++|.+.++.
T Consensus 39 ~~al~~~~~~---~~dlvilD~~lp~~~g~~~~~~l~~~~~~~~ii~ls~ 85 (133)
T 3b2n_A 39 LDAMKLIEEY---NPNVVILDIEMPGMTGLEVLAEIRKKHLNIKVIIVTT 85 (133)
T ss_dssp HHHHHHHHHH---CCSEEEECSSCSSSCHHHHHHHHHHTTCSCEEEEEES
T ss_pred HHHHHHHhhc---CCCEEEEecCCCCCCHHHHHHHHHHHCCCCcEEEEec
Confidence 4445444332 799999998764 355555543 467776654
No 98
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=24.55 E-value=52 Score=25.83 Aligned_cols=43 Identities=21% Similarity=0.203 Sum_probs=29.0
Q ss_pred HHHHHHHHHHc-CCCCccEEEeCCCchhHHHHHHHcCCCeEeEe
Q 035856 42 FKKGLDAAVSK-TGRKISCFLTDAFLTFSGEMARDMHIPWFPVF 84 (278)
Q Consensus 42 l~~~l~~l~~~-~~~~~d~vI~D~~~~~~~~vA~~lgIP~v~~~ 84 (278)
++.+++++.+. .+..+.+||+|.--.-+...|+++|||+..+.
T Consensus 22 l~all~~~~~~~~~~~I~~Vis~~~~a~~l~~A~~~gIp~~~~~ 65 (215)
T 3kcq_A 22 LEALAKAFSTEESSVVISCVISNNAEARGLLIAQSYGIPTFVVK 65 (215)
T ss_dssp HHHHHHHTCCC-CSEEEEEEEESCTTCTHHHHHHHTTCCEEECC
T ss_pred HHHHHHHHHcCCCCcEEEEEEeCCcchHHHHHHHHcCCCEEEeC
Confidence 45555554221 11267889998655557889999999998753
No 99
>3goc_A Endonuclease V; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: YES; 1.60A {Streptomyces avermitilis}
Probab=24.39 E-value=1e+02 Score=24.62 Aligned_cols=34 Identities=9% Similarity=0.056 Sum_probs=24.7
Q ss_pred HcCCCCccEEEeCCCch-------hHHHHHHHcCCCeEeEe
Q 035856 51 SKTGRKISCFLTDAFLT-------FSGEMARDMHIPWFPVF 84 (278)
Q Consensus 51 ~~~~~~~d~vI~D~~~~-------~~~~vA~~lgIP~v~~~ 84 (278)
++...+||+|++|-.-. -+..+.-.+|+|++-.-
T Consensus 102 ~~L~~~PdlllvDG~GiaHPRr~GlAsHlGv~l~~PtIGVA 142 (237)
T 3goc_A 102 DALPCPPGLIVCDGYGVAHPRRFGLASHLGVLTGLPTIGVA 142 (237)
T ss_dssp HTSSSCCSEEEEESCSSCSTTSCCHHHHHHHHHCSCEEEEE
T ss_pred HhcCCCCCEEEEeCceeecCCCcchhheeeeecCCCEEeee
Confidence 44446899999998543 45677777889998763
No 100
>2qzj_A Two-component response regulator; 11017X, PSI-II, structural genomics; 2.89A {Clostridium difficile}
Probab=24.19 E-value=1.2e+02 Score=20.78 Aligned_cols=41 Identities=10% Similarity=0.152 Sum_probs=25.3
Q ss_pred HHHHHHHHHcCCCCccEEEeCCCch--hHHHHHHHc----CCCeEeEeCC
Q 035856 43 KKGLDAAVSKTGRKISCFLTDAFLT--FSGEMARDM----HIPWFPVFVA 86 (278)
Q Consensus 43 ~~~l~~l~~~~~~~~d~vI~D~~~~--~~~~vA~~l----gIP~v~~~~~ 86 (278)
.+.++.+.+ .+||+||.|..++ -+..+++++ .+|.+.++..
T Consensus 38 ~~al~~~~~---~~~dlvllD~~l~~~~g~~l~~~l~~~~~~~ii~ls~~ 84 (136)
T 2qzj_A 38 EEAIGKIFS---NKYDLIFLEIILSDGDGWTLCKKIRNVTTCPIVYMTYI 84 (136)
T ss_dssp HHHHHHHHH---CCCSEEEEESEETTEEHHHHHHHHHTTCCCCEEEEESC
T ss_pred HHHHHHHHh---cCCCEEEEeCCCCCCCHHHHHHHHccCCCCCEEEEEcC
Confidence 444544433 3899999998664 355555544 5777766543
No 101
>3md9_A Hemin-binding periplasmic protein HMUT; transport protein, alpha beta protein, rigid helical backbon substrate-free, heme transport; 1.50A {Yersinia pestis} PDB: 3nu1_A*
Probab=23.83 E-value=74 Score=25.05 Aligned_cols=37 Identities=8% Similarity=0.028 Sum_probs=24.5
Q ss_pred HHHHHHHcCCCCccEEEeCCCch--hHHHHHHHcCCCeEeEe
Q 035856 45 GLDAAVSKTGRKISCFLTDAFLT--FSGEMARDMHIPWFPVF 84 (278)
Q Consensus 45 ~l~~l~~~~~~~~d~vI~D~~~~--~~~~vA~~lgIP~v~~~ 84 (278)
-++++++- +||+||...... -...--++.|||.+.+.
T Consensus 51 n~E~i~~l---~PDlIi~~~~~~~~~~~~~L~~~gipvv~~~ 89 (255)
T 3md9_A 51 NAEGILAM---KPTMLLVSELAQPSLVLTQIASSGVNVVTVP 89 (255)
T ss_dssp CHHHHHTT---CCSEEEEETTCSCHHHHHHHHHTTCEEEEEC
T ss_pred CHHHHHcc---CCCEEEEcCCcCchhHHHHHHHcCCcEEEeC
Confidence 35666543 999999876542 12333457899999874
No 102
>2q8p_A Iron-regulated surface determinant E; helical backbone metal receptor superfamily, metal transport; HET: HEM; 1.95A {Staphylococcus aureus subsp} PDB: 2q8q_A*
Probab=23.66 E-value=76 Score=25.05 Aligned_cols=38 Identities=8% Similarity=0.028 Sum_probs=23.8
Q ss_pred HHHHHHHcCCCCccEEEeCCCch-hHHHHHHHcCCCeEeEeC
Q 035856 45 GLDAAVSKTGRKISCFLTDAFLT-FSGEMARDMHIPWFPVFV 85 (278)
Q Consensus 45 ~l~~l~~~~~~~~d~vI~D~~~~-~~~~vA~~lgIP~v~~~~ 85 (278)
-++++++- +||+||...... -....-+++|||.+.+..
T Consensus 52 n~E~i~~l---~PDLIi~~~~~~~~~~~~L~~~gipvv~~~~ 90 (260)
T 2q8p_A 52 NVEAVKKL---KPTHVLSVSTIKDEMQPFYKQLNMKGYFYDF 90 (260)
T ss_dssp CHHHHHHT---CCSEEEEEGGGHHHHHHHHHHHTSCCEEECC
T ss_pred CHHHHHhc---CCCEEEecCccCHHHHHHHHHcCCcEEEecC
Confidence 35555543 999999764321 123444678999988743
No 103
>2xdq_B Light-independent protochlorophyllide reductase S; oxidoreductase, DPOR, (bacterio)chlorophyll biosynthesis, photosynthesis; 2.40A {Thermosynechococcus elongatus}
Probab=23.59 E-value=48 Score=29.78 Aligned_cols=26 Identities=8% Similarity=0.207 Sum_probs=21.9
Q ss_pred CccEEEeCCCchhHHHHHHHcCCCeEeEe
Q 035856 56 KISCFLTDAFLTFSGEMARDMHIPWFPVF 84 (278)
Q Consensus 56 ~~d~vI~D~~~~~~~~vA~~lgIP~v~~~ 84 (278)
+||++|.+. ....+|+++|||++.+.
T Consensus 372 ~pDl~ig~~---~~r~~a~k~gip~~~i~ 397 (511)
T 2xdq_B 372 EPAAIFGTQ---MERHVGKRLNIPCGVIA 397 (511)
T ss_dssp CCSEEEECH---HHHHHHHHHTCCEEECS
T ss_pred CCCEEEecc---chHHHHHhcCCCeEecc
Confidence 899999864 67789999999998753
No 104
>1srr_A SPO0F, sporulation response regulatory protein; aspartate pocket, two component system; 1.90A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 1pey_A 3q15_C 2ftk_E* 1fsp_A 1nat_A 1pux_A 2fsp_A 2jvj_A 2jvk_A 2jvi_A 1f51_E
Probab=22.89 E-value=1.2e+02 Score=20.15 Aligned_cols=41 Identities=17% Similarity=0.125 Sum_probs=24.7
Q ss_pred HHHHHHHHHcCCCCccEEEeCCCch--hHHHHHHHc-----CCCeEeEeCC
Q 035856 43 KKGLDAAVSKTGRKISCFLTDAFLT--FSGEMARDM-----HIPWFPVFVA 86 (278)
Q Consensus 43 ~~~l~~l~~~~~~~~d~vI~D~~~~--~~~~vA~~l-----gIP~v~~~~~ 86 (278)
.+.++.+.+. +||+||.|..++ -+..+++++ ++|.+.++..
T Consensus 37 ~~a~~~~~~~---~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~ 84 (124)
T 1srr_A 37 LQALDIVTKE---RPDLVLLDMKIPGMDGIEILKRMKVIDENIRVIIMTAY 84 (124)
T ss_dssp HHHHHHHHHH---CCSEEEEESCCTTCCHHHHHHHHHHHCTTCEEEEEESS
T ss_pred HHHHHHHhcc---CCCEEEEecCCCCCCHHHHHHHHHHhCCCCCEEEEEcc
Confidence 3444444332 799999998664 345555543 5777766543
No 105
>1mio_B Nitrogenase molybdenum iron protein (beta chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=22.83 E-value=71 Score=28.14 Aligned_cols=33 Identities=12% Similarity=0.394 Sum_probs=25.3
Q ss_pred HHHHHHcCCCCccEEEeCCCchhHHHHHHHcCCCeEeE
Q 035856 46 LDAAVSKTGRKISCFLTDAFLTFSGEMARDMHIPWFPV 83 (278)
Q Consensus 46 l~~l~~~~~~~~d~vI~D~~~~~~~~vA~~lgIP~v~~ 83 (278)
+++++++. +||++|.+. ....+|+++|||++.+
T Consensus 377 l~~~i~~~--~pDl~ig~~---~~~~~a~k~gip~~~~ 409 (458)
T 1mio_B 377 VHQWIKNE--GVDLLISNT---YGKFIAREENIPFVRF 409 (458)
T ss_dssp HHHHHHHS--CCSEEEESG---GGHHHHHHHTCCEEEC
T ss_pred HHHHHHhc--CCCEEEeCc---chHHHHHHcCCCEEEe
Confidence 44444443 999999886 4578899999999975
No 106
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis}
Probab=22.65 E-value=1.3e+02 Score=20.39 Aligned_cols=40 Identities=10% Similarity=-0.066 Sum_probs=24.1
Q ss_pred HHHHHHHHHcCCCCccEEEeCCCch-------hHHHHHHHc-----CCCeEeEeC
Q 035856 43 KKGLDAAVSKTGRKISCFLTDAFLT-------FSGEMARDM-----HIPWFPVFV 85 (278)
Q Consensus 43 ~~~l~~l~~~~~~~~d~vI~D~~~~-------~~~~vA~~l-----gIP~v~~~~ 85 (278)
.+.++.+.+ .+||+||.|..+. .+..+.+++ ++|.+.+..
T Consensus 37 ~~a~~~l~~---~~~dlvi~d~~~~~~~~~~~~g~~~~~~l~~~~~~~~ii~ls~ 88 (140)
T 2qr3_A 37 VSLSTVLRE---ENPEVVLLDMNFTSGINNGNEGLFWLHEIKRQYRDLPVVLFTA 88 (140)
T ss_dssp HHHHHHHHH---SCEEEEEEETTTTC-----CCHHHHHHHHHHHCTTCCEEEEEE
T ss_pred HHHHHHHHc---CCCCEEEEeCCcCCCCCCCccHHHHHHHHHhhCcCCCEEEEEC
Confidence 444544433 2799999997654 344444433 578777654
No 107
>1dbw_A Transcriptional regulatory protein FIXJ; doubly wound five-stranded beta/alpha fold, nitrogen fixatio regulation; HET: 15P; 1.60A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1dck_A* 1dcm_A 1d5w_A*
Probab=22.41 E-value=1.1e+02 Score=20.46 Aligned_cols=32 Identities=19% Similarity=0.236 Sum_probs=21.4
Q ss_pred CCccEEEeCCCch--hHHHHHHHc-----CCCeEeEeCC
Q 035856 55 RKISCFLTDAFLT--FSGEMARDM-----HIPWFPVFVA 86 (278)
Q Consensus 55 ~~~d~vI~D~~~~--~~~~vA~~l-----gIP~v~~~~~ 86 (278)
.+||+||.|..++ -+..+.+++ ++|.+.++..
T Consensus 46 ~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~ 84 (126)
T 1dbw_A 46 VRNGVLVTDLRMPDMSGVELLRNLGDLKINIPSIVITGH 84 (126)
T ss_dssp CCSEEEEEECCSTTSCHHHHHHHHHHTTCCCCEEEEECT
T ss_pred CCCCEEEEECCCCCCCHHHHHHHHHhcCCCCCEEEEECC
Confidence 3799999998664 355555543 5777776543
No 108
>3crn_A Response regulator receiver domain protein, CHEY-; structural genomics, signal regulator receiver domain; HET: PHD; 1.58A {Methanospirillum hungatei jf-1}
Probab=22.26 E-value=1.4e+02 Score=20.14 Aligned_cols=41 Identities=15% Similarity=-0.015 Sum_probs=24.4
Q ss_pred HHHHHHHHHcCCCCccEEEeCCCch--hHHHHHHHc-----CCCeEeEeCC
Q 035856 43 KKGLDAAVSKTGRKISCFLTDAFLT--FSGEMARDM-----HIPWFPVFVA 86 (278)
Q Consensus 43 ~~~l~~l~~~~~~~~d~vI~D~~~~--~~~~vA~~l-----gIP~v~~~~~ 86 (278)
.+.++.+.+ .+||+||.|..++ -|..+.+++ ++|.+.++..
T Consensus 37 ~~al~~~~~---~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~ 84 (132)
T 3crn_A 37 GEGLAKIEN---EFFNLALFXIKLPDMEGTELLEKAHKLRPGMKKIMVTGY 84 (132)
T ss_dssp HHHHHHHHH---SCCSEEEECSBCSSSBHHHHHHHHHHHCTTSEEEEEESC
T ss_pred HHHHHHHhc---CCCCEEEEecCCCCCchHHHHHHHHhhCCCCcEEEEecc
Confidence 444544433 3799999998664 344444433 4677766543
No 109
>3aek_B Light-independent protochlorophyllide reductase S; iron/sulfur cluster, oxidoreductase, bacteriochlorophyll biosynthesis; HET: PMR; 2.30A {Rhodobacter capsulatus} PDB: 3aeq_B* 3aer_B 3aes_B* 3aeu_B 3aet_B
Probab=22.13 E-value=53 Score=29.65 Aligned_cols=25 Identities=12% Similarity=0.255 Sum_probs=21.5
Q ss_pred CccEEEeCCCchhHHHHHHHcCCCeEeE
Q 035856 56 KISCFLTDAFLTFSGEMARDMHIPWFPV 83 (278)
Q Consensus 56 ~~d~vI~D~~~~~~~~vA~~lgIP~v~~ 83 (278)
+||++|.+. ....+|+++|||++.+
T Consensus 349 ~pDL~ig~~---~~~~~a~~~giP~~~i 373 (525)
T 3aek_B 349 APELILGTQ---MERNIAKKLGLPCAVI 373 (525)
T ss_dssp CCSEEEECH---HHHHHHHHHTCCEEEC
T ss_pred CCCEEEecc---hhHHHHHHcCCCEEEe
Confidence 899999875 6788999999999863
No 110
>1xhf_A DYE resistance, aerobic respiration control protein ARCA; two-component system, gene regulation, transcription factor, anoxic redox control; 2.15A {Escherichia coli} SCOP: c.23.1.1 PDB: 1xhe_A
Probab=21.53 E-value=1.6e+02 Score=19.35 Aligned_cols=31 Identities=16% Similarity=0.153 Sum_probs=20.3
Q ss_pred CccEEEeCCCch--hHHHHHHHc----CCCeEeEeCC
Q 035856 56 KISCFLTDAFLT--FSGEMARDM----HIPWFPVFVA 86 (278)
Q Consensus 56 ~~d~vI~D~~~~--~~~~vA~~l----gIP~v~~~~~ 86 (278)
+||+||.|..++ -+..+++++ ++|.+.++..
T Consensus 47 ~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~ii~~s~~ 83 (123)
T 1xhf_A 47 DINLVIMDINLPGKNGLLLARELREQANVALMFLTGR 83 (123)
T ss_dssp CCSEEEECSSCSSSCHHHHHHHHHHHCCCEEEEEESC
T ss_pred CCCEEEEcCCCCCCCHHHHHHHHHhCCCCcEEEEECC
Confidence 899999998664 344444443 5777766543
No 111
>3nhm_A Response regulator; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.19A {Myxococcus xanthus}
Probab=21.26 E-value=1.9e+02 Score=19.26 Aligned_cols=41 Identities=20% Similarity=0.185 Sum_probs=24.5
Q ss_pred HHHHHHHHHHcCCCCccEEEeCCCch--hHHHHHHH-------cCCCeEeEeC
Q 035856 42 FKKGLDAAVSKTGRKISCFLTDAFLT--FSGEMARD-------MHIPWFPVFV 85 (278)
Q Consensus 42 l~~~l~~l~~~~~~~~d~vI~D~~~~--~~~~vA~~-------lgIP~v~~~~ 85 (278)
..+.++.+.+ .+||+||.|..+. -+..+.++ -++|.+.++.
T Consensus 36 ~~~a~~~l~~---~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~~pii~~s~ 85 (133)
T 3nhm_A 36 GASGLQQALA---HPPDVLISDVNMDGMDGYALCGHFRSEPTLKHIPVIFVSG 85 (133)
T ss_dssp HHHHHHHHHH---SCCSEEEECSSCSSSCHHHHHHHHHHSTTTTTCCEEEEES
T ss_pred HHHHHHHHhc---CCCCEEEEeCCCCCCCHHHHHHHHHhCCccCCCCEEEEeC
Confidence 3444555433 3899999998654 24443332 1678877664
No 112
>1mb3_A Cell division response regulator DIVK; signal transduction protein, structural proteomics in europe, spine, structural genomics; 1.41A {Caulobacter vibrioides} SCOP: c.23.1.1 PDB: 1m5u_A 1mav_A 1mb0_A 1m5t_A
Probab=21.08 E-value=1.4e+02 Score=19.69 Aligned_cols=30 Identities=30% Similarity=0.284 Sum_probs=19.5
Q ss_pred CccEEEeCCCch--hHHHHHHHc-------CCCeEeEeC
Q 035856 56 KISCFLTDAFLT--FSGEMARDM-------HIPWFPVFV 85 (278)
Q Consensus 56 ~~d~vI~D~~~~--~~~~vA~~l-------gIP~v~~~~ 85 (278)
+||+||.|..++ -+..+++++ ++|.+.++.
T Consensus 45 ~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~ 83 (124)
T 1mb3_A 45 KPDLILMDIQLPEISGLEVTKWLKEDDDLAHIPVVAVTA 83 (124)
T ss_dssp CCSEEEEESBCSSSBHHHHHHHHHHSTTTTTSCEEEEC-
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHcCccccCCcEEEEEC
Confidence 799999998764 355555433 567776643
No 113
>2r7a_A Bacterial heme binding protein; periplasmic binding protein, heme transport, transport protein; HET: HEM; 2.05A {Shigella dysenteriae} PDB: 2rg7_A
Probab=21.05 E-value=91 Score=24.52 Aligned_cols=37 Identities=8% Similarity=-0.038 Sum_probs=23.6
Q ss_pred HHHHHHHcCCCCccEEEeCCCc--hhHHHHHHHcCCCeEeEe
Q 035856 45 GLDAAVSKTGRKISCFLTDAFL--TFSGEMARDMHIPWFPVF 84 (278)
Q Consensus 45 ~l~~l~~~~~~~~d~vI~D~~~--~~~~~vA~~lgIP~v~~~ 84 (278)
-++++++- +||+||..... .-...--+++|||.+.+.
T Consensus 51 n~E~i~~l---~PDLIi~~~~~~~~~~~~~L~~~gipvv~~~ 89 (256)
T 2r7a_A 51 SSEGILSL---RPDSVITWQDAGPQIVLDQLRAQKVNVVTLP 89 (256)
T ss_dssp CHHHHHTT---CCSEEEEETTCSCHHHHHHHHHTTCEEEEEC
T ss_pred CHHHHHcc---CCCEEEEcCCCCCHHHHHHHHHcCCcEEEec
Confidence 35666543 99999986532 122333457899998774
No 114
>1n2z_A Vitamin B12 transport protein BTUF; HET: CNC PG4; 2.00A {Escherichia coli} SCOP: c.92.2.2 PDB: 2qi9_F* 4dbl_E 1n4a_A* 1n4d_A
Probab=20.81 E-value=1.1e+02 Score=23.76 Aligned_cols=37 Identities=14% Similarity=-0.081 Sum_probs=23.0
Q ss_pred HHHHHHHcCCCCccEEEeCCC--chhHHHHHHHcCCCeEeEe
Q 035856 45 GLDAAVSKTGRKISCFLTDAF--LTFSGEMARDMHIPWFPVF 84 (278)
Q Consensus 45 ~l~~l~~~~~~~~d~vI~D~~--~~~~~~vA~~lgIP~v~~~ 84 (278)
-++++++- +||+||.... ..-...--+++|||.+.+.
T Consensus 49 n~E~i~~l---~PDLIi~~~~~~~~~~~~~L~~~gipvv~~~ 87 (245)
T 1n2z_A 49 NLERIVAL---KPDLVIAWRGGNAERQVDQLASLGIKVMWVD 87 (245)
T ss_dssp CHHHHHHT---CCSEEEECTTTSCHHHHHHHHHHTCCEEECC
T ss_pred CHHHHhcc---CCCEEEEeCCCCcHHHHHHHHHCCCcEEEeC
Confidence 35666553 9999998532 1222333457899998764
No 115
>3cfy_A Putative LUXO repressor protein; structural genomics, unknown function, uncharacterized protein, signal receiver domain; 2.50A {Vibrio parahaemolyticus rimd 2210633}
Probab=20.59 E-value=1.5e+02 Score=20.17 Aligned_cols=40 Identities=8% Similarity=-0.016 Sum_probs=24.2
Q ss_pred HHHHHHHHHcCCCCccEEEeCCCch--hHHHHHHHc-----CCCeEeEeC
Q 035856 43 KKGLDAAVSKTGRKISCFLTDAFLT--FSGEMARDM-----HIPWFPVFV 85 (278)
Q Consensus 43 ~~~l~~l~~~~~~~~d~vI~D~~~~--~~~~vA~~l-----gIP~v~~~~ 85 (278)
.+.++.+.+. +||+||.|..++ .|..+.+++ .+|.+.++.
T Consensus 38 ~~a~~~l~~~---~~dlvllD~~l~~~~g~~l~~~l~~~~~~~~ii~ls~ 84 (137)
T 3cfy_A 38 RDAIQFIERS---KPQLIILDLKLPDMSGEDVLDWINQNDIPTSVIIATA 84 (137)
T ss_dssp HHHHHHHHHH---CCSEEEECSBCSSSBHHHHHHHHHHTTCCCEEEEEES
T ss_pred HHHHHHHHhc---CCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEEEEEe
Confidence 4445444332 899999998664 355555543 466666554
No 116
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=20.53 E-value=2.9e+02 Score=24.57 Aligned_cols=62 Identities=10% Similarity=-0.023 Sum_probs=46.3
Q ss_pred CCcHHHHHHHHHHchHHHHHHHHHHHHcCCCCccEEEeCCC----chhHHHHHHHcCCCeEeEeCC
Q 035856 25 SNPLEAVELFVKATPENFKKGLDAAVSKTGRKISCFLTDAF----LTFSGEMARDMHIPWFPVFVA 86 (278)
Q Consensus 25 ~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~d~vI~D~~----~~~~~~vA~~lgIP~v~~~~~ 86 (278)
.+..++++.+++...-.++..++.+.+..+.+++-|+++-- -.|.+..|..+|+|....-..
T Consensus 371 ~~~~~i~RAvlEgia~~~r~~le~l~~~~g~~~~~i~v~GGgaks~~~~Qi~ADvlg~pV~~~~~~ 436 (526)
T 3ezw_A 371 VNANHIIRATLESIAYQTRDVLEAMQADSGIRLHALRVDGGAVANNFLMQFQSDILGTRVERPEVR 436 (526)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCSEEEEESGGGGCHHHHHHHHHHHTSEEEEESCC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCEEEEECchhhCHHHHHHHHHHHCCEEEeCCCC
Confidence 34566777777766566888888876655678998888753 368999999999999876543
No 117
>3e61_A Putative transcriptional repressor of ribose OPER; structural genomics, DNA-binding, transcripti regulation, PSI-2; 2.00A {Staphylococcus saprophyticus subsp}
Probab=20.52 E-value=1.4e+02 Score=23.43 Aligned_cols=40 Identities=25% Similarity=0.197 Sum_probs=25.2
Q ss_pred HHHHHHHHcCCCCccEEEeCCCchhHHH-HHHHcCCCeEeEeCC
Q 035856 44 KGLDAAVSKTGRKISCFLTDAFLTFSGE-MARDMHIPWFPVFVA 86 (278)
Q Consensus 44 ~~l~~l~~~~~~~~d~vI~D~~~~~~~~-vA~~lgIP~v~~~~~ 86 (278)
..++.+.+ .++|.||......-... .+.+.|||.|.+...
T Consensus 55 ~~~~~l~~---~~~dgiIi~~~~~~~~~~~l~~~~iPvV~~~~~ 95 (277)
T 3e61_A 55 GYLATFVS---HNCTGMISTAFNENIIENTLTDHHIPFVFIDRI 95 (277)
T ss_dssp HHHHHHHH---TTCSEEEECGGGHHHHHHHHHHC-CCEEEGGGC
T ss_pred HHHHHHHh---CCCCEEEEecCChHHHHHHHHcCCCCEEEEecc
Confidence 34445443 38999988764433445 667789999987543
No 118
>1zh2_A KDP operon transcriptional regulatory protein KDPE; two-component system, gene regulation, transcription factor, KDP potassium transport system; 2.00A {Escherichia coli} SCOP: c.23.1.1 PDB: 1zh4_A
Probab=20.48 E-value=1.5e+02 Score=19.29 Aligned_cols=31 Identities=23% Similarity=0.190 Sum_probs=20.7
Q ss_pred CccEEEeCCCch--hHHHHHHHc----CCCeEeEeCC
Q 035856 56 KISCFLTDAFLT--FSGEMARDM----HIPWFPVFVA 86 (278)
Q Consensus 56 ~~d~vI~D~~~~--~~~~vA~~l----gIP~v~~~~~ 86 (278)
+||++|.|..++ .+..+++++ .+|.+.++..
T Consensus 45 ~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~ii~~s~~ 81 (121)
T 1zh2_A 45 KPDLIILDLGLPDGDGIEFIRDLRQWSAVPVIVLSAR 81 (121)
T ss_dssp CCSEEEEESEETTEEHHHHHHHHHTTCCCCEEEEESC
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHhCCCCcEEEEECC
Confidence 799999998664 355555544 4677766543
No 119
>2r25_B Osmosensing histidine protein kinase SLN1; alpha5-BETA5, response regulator, four helix bundle, histidine phosphotransfer (HPT) protein; 1.70A {Saccharomyces cerevisiae} SCOP: c.23.1.1 PDB: 1oxk_B 1oxb_B
Probab=20.22 E-value=2e+02 Score=19.34 Aligned_cols=31 Identities=6% Similarity=0.023 Sum_probs=20.2
Q ss_pred CCccEEEeCCCch--hHHHHHHHc------CCCeEeEeC
Q 035856 55 RKISCFLTDAFLT--FSGEMARDM------HIPWFPVFV 85 (278)
Q Consensus 55 ~~~d~vI~D~~~~--~~~~vA~~l------gIP~v~~~~ 85 (278)
.+||+||.|..++ -|..+++++ .+|.+.++.
T Consensus 51 ~~~dlvllD~~mp~~~G~~~~~~lr~~~~~~~~ii~lt~ 89 (133)
T 2r25_B 51 ENYNMIFMDVQMPKVDGLLSTKMIRRDLGYTSPIVALTA 89 (133)
T ss_dssp CCCSEEEECSCCSSSCHHHHHHHHHHHSCCCSCEEEEES
T ss_pred CCCCEEEEeCCCCCCChHHHHHHHHhhcCCCCCEEEEEC
Confidence 3799999998765 355544432 467666554
Done!