BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 035861
(332 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 276 bits (705), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 137/308 (44%), Positives = 203/308 (65%), Gaps = 16/308 (5%)
Query: 9 SVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREIN 68
S+ F+K+ KI EGTYG+VY+AR+K +GE+VALKK+++ D G P +++REI+
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL------DTETEGVPSTAIREIS 55
Query: 69 ILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLME-SMKQPFSTSEVKCLMLQLL 127
+L +HP+IV + +V+ + + +Y+V E++ DLK M+ S +K + QLL
Sbjct: 56 LLKELNHPNIVKLLDVIHTE-NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLL 114
Query: 128 EGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPE 187
+G+ + H + VLHRDLK NLL+N +G +K+ DFG++R +G P++ YT VVTLWYRAPE
Sbjct: 115 QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPE 174
Query: 188 LLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSE 247
+LLG K YSTAVD+WS+GCI AE++ ++ LF G +E+DQ+ +IF+TLGTP E +WPG++
Sbjct: 175 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS 234
Query: 248 LPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHY 307
+P K +F K K P L E G LL+++L YDP KRI+ AL H
Sbjct: 235 MPDYKPSFPKWARQDFSKVVPP--------LDEDGRSLLSQMLHYDPNKRISAKAALAHP 286
Query: 308 WFHEVPLP 315
+F +V P
Sbjct: 287 FFQDVTKP 294
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 276 bits (705), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 136/304 (44%), Positives = 201/304 (66%), Gaps = 16/304 (5%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
F+K+ KI EGTYG+VY+AR+K +GE+VALKK+++ D G P +++REI++L
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL------DTETEGVPSTAIREISLLKE 58
Query: 73 FDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLME-SMKQPFSTSEVKCLMLQLLEGVK 131
+HP+IV + +V+ + + +Y+V E++ DLK M+ S +K + QLL+G+
Sbjct: 59 LNHPNIVKLLDVIHTE-NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 132 YLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLG 191
+ H + VLHRDLK NLL+N +G +K+ DFG++R +G P++ YT VVTLWYRAPE+LLG
Sbjct: 118 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG 177
Query: 192 AKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGA 251
K YSTAVD+WS+GCI AE++ ++ LF G +E+DQ+ +IF+TLGTP E +WPG++ +P
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 237
Query: 252 KANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHE 311
K +F K K P L E G LL+++L YDP KRI+ AL H +F +
Sbjct: 238 KPSFPKWARQDFSKVVPP--------LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
Query: 312 VPLP 315
V P
Sbjct: 290 VTKP 293
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 276 bits (705), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 136/304 (44%), Positives = 201/304 (66%), Gaps = 16/304 (5%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
F+K+ KI EGTYG+VY+AR+K +GE+VALKK+++ D G P +++REI++L
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL------DTETEGVPSTAIREISLLKE 58
Query: 73 FDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLME-SMKQPFSTSEVKCLMLQLLEGVK 131
+HP+IV + +V+ + + +Y+V E++ DLK M+ S +K + QLL+G+
Sbjct: 59 LNHPNIVKLLDVIHTE-NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 132 YLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLG 191
+ H + VLHRDLK NLL+N +G +K+ DFG++R +G P++ YT VVTLWYRAPE+LLG
Sbjct: 118 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG 177
Query: 192 AKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGA 251
K YSTAVD+WS+GCI AE++ ++ LF G +E+DQ+ +IF+TLGTP E +WPG++ +P
Sbjct: 178 XKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 237
Query: 252 KANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHE 311
K +F K K P L E G LL+++L YDP KRI+ AL H +F +
Sbjct: 238 KPSFPKWARQDFSKVVPP--------LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
Query: 312 VPLP 315
V P
Sbjct: 290 VTKP 293
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 276 bits (705), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 136/304 (44%), Positives = 201/304 (66%), Gaps = 16/304 (5%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
F+K+ KI EGTYG+VY+AR+K +GE+VALKK+++ D G P +++REI++L
Sbjct: 12 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL------DTETEGVPSTAIREISLLKE 65
Query: 73 FDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLME-SMKQPFSTSEVKCLMLQLLEGVK 131
+HP+IV + +V+ + + +Y+V E++ DLK M+ S +K + QLL+G+
Sbjct: 66 LNHPNIVKLLDVIHTE-NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 124
Query: 132 YLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLG 191
+ H + VLHRDLK NLL+N +G +K+ DFG++R +G P++ YT VVTLWYRAPE+LLG
Sbjct: 125 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG 184
Query: 192 AKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGA 251
K YSTAVD+WS+GCI AE++ ++ LF G +E+DQ+ +IF+TLGTP E +WPG++ +P
Sbjct: 185 XKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 244
Query: 252 KANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHE 311
K +F K K P L E G LL+++L YDP KRI+ AL H +F +
Sbjct: 245 KPSFPKWARQDFSKVVPP--------LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 296
Query: 312 VPLP 315
V P
Sbjct: 297 VTKP 300
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 276 bits (705), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 136/304 (44%), Positives = 201/304 (66%), Gaps = 16/304 (5%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
F+K+ KI EGTYG+VY+AR+K +GE+VALKK+++ D G P +++REI++L
Sbjct: 12 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL------DTETEGVPSTAIREISLLKE 65
Query: 73 FDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLME-SMKQPFSTSEVKCLMLQLLEGVK 131
+HP+IV + +V+ + + +Y+V E++ DLK M+ S +K + QLL+G+
Sbjct: 66 LNHPNIVKLLDVIHTE-NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 124
Query: 132 YLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLG 191
+ H + VLHRDLK NLL+N +G +K+ DFG++R +G P++ YT VVTLWYRAPE+LLG
Sbjct: 125 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG 184
Query: 192 AKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGA 251
K YSTAVD+WS+GCI AE++ ++ LF G +E+DQ+ +IF+TLGTP E +WPG++ +P
Sbjct: 185 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 244
Query: 252 KANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHE 311
K +F K K P L E G LL+++L YDP KRI+ AL H +F +
Sbjct: 245 KPSFPKWARQDFSKVVPP--------LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 296
Query: 312 VPLP 315
V P
Sbjct: 297 VTKP 300
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 275 bits (704), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 137/304 (45%), Positives = 203/304 (66%), Gaps = 16/304 (5%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
F+K+ KI EGTYG+VY+AR+K +GE+VALKK+++ D G P +++REI++L
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL------DTETEGVPSTAIREISLLKE 58
Query: 73 FDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLME-SMKQPFSTSEVKCLMLQLLEGVK 131
+HP+IV + +V+ + + +Y+V E++ DLK M+ S +K + QLL+G+
Sbjct: 59 LNHPNIVKLLDVIHTE-NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLS 117
Query: 132 YLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLG 191
+ H + VLHRDLK NLL+N +G +K+ DFG++R +G P++ YT VVTLWYRAPE+LLG
Sbjct: 118 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG 177
Query: 192 AKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGA 251
K YSTAVD+WS+GCI AE++ ++ LF G +E+DQ+ +IF+TLGTP E +WPG++ +P
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 237
Query: 252 KANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHE 311
K +F K R+ F P L E G LL+++L YDP KRI+ AL H +F +
Sbjct: 238 KPSFPKWA----RQDFSKV----VPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
Query: 312 VPLP 315
V P
Sbjct: 290 VTKP 293
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 275 bits (704), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 136/304 (44%), Positives = 201/304 (66%), Gaps = 16/304 (5%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
F+K+ KI EGTYG+VY+AR+K +GE+VALKK+++ D G P +++REI++L
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL------DTETEGVPSTAIREISLLKE 57
Query: 73 FDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLME-SMKQPFSTSEVKCLMLQLLEGVK 131
+HP+IV + +V+ + + +Y+V E++ DLK M+ S +K + QLL+G+
Sbjct: 58 LNHPNIVKLLDVIHTE-NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 116
Query: 132 YLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLG 191
+ H + VLHRDLK NLL+N +G +K+ DFG++R +G P++ YT VVTLWYRAPE+LLG
Sbjct: 117 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG 176
Query: 192 AKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGA 251
K YSTAVD+WS+GCI AE++ ++ LF G +E+DQ+ +IF+TLGTP E +WPG++ +P
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 236
Query: 252 KANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHE 311
K +F K K P L E G LL+++L YDP KRI+ AL H +F +
Sbjct: 237 KPSFPKWARQDFSKVVPP--------LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 288
Query: 312 VPLP 315
V P
Sbjct: 289 VTKP 292
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 275 bits (704), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 136/304 (44%), Positives = 201/304 (66%), Gaps = 16/304 (5%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
F+K+ KI EGTYG+VY+AR+K +GE+VALKK+++ D G P +++REI++L
Sbjct: 9 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL------DTETEGVPSTAIREISLLKE 62
Query: 73 FDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLME-SMKQPFSTSEVKCLMLQLLEGVK 131
+HP+IV + +V+ + + +Y+V E++ DLK M+ S +K + QLL+G+
Sbjct: 63 LNHPNIVKLLDVIHTE-NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 121
Query: 132 YLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLG 191
+ H + VLHRDLK NLL+N +G +K+ DFG++R +G P++ YT VVTLWYRAPE+LLG
Sbjct: 122 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG 181
Query: 192 AKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGA 251
K YSTAVD+WS+GCI AE++ ++ LF G +E+DQ+ +IF+TLGTP E +WPG++ +P
Sbjct: 182 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 241
Query: 252 KANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHE 311
K +F K K P L E G LL+++L YDP KRI+ AL H +F +
Sbjct: 242 KPSFPKWARQDFSKVVPP--------LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 293
Query: 312 VPLP 315
V P
Sbjct: 294 VTKP 297
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 275 bits (704), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 137/304 (45%), Positives = 203/304 (66%), Gaps = 16/304 (5%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
F+K+ KI EGTYG+VY+AR+K +GE+VALKK+++ D G P +++REI++L
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL------DTETEGVPSTAIREISLLKE 58
Query: 73 FDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLME-SMKQPFSTSEVKCLMLQLLEGVK 131
+HP+IV + +V+ + + +Y+V E++ DLK M+ S +K + QLL+G+
Sbjct: 59 LNHPNIVKLLDVIHTE-NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 132 YLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLG 191
+ H + VLHRDLK NLL+N +G +K+ DFG++R +G P++ YT VVTLWYRAPE+LLG
Sbjct: 118 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG 177
Query: 192 AKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGA 251
K YSTAVD+WS+GCI AE++ ++ LF G +E+DQ+ +IF+TLGTP E +WPG++ +P
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 237
Query: 252 KANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHE 311
K +F K R+ F P L E G LL+++L YDP KRI+ AL H +F +
Sbjct: 238 KPSFPKWA----RQDFSKV----VPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
Query: 312 VPLP 315
V P
Sbjct: 290 VTKP 293
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 275 bits (704), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 137/304 (45%), Positives = 203/304 (66%), Gaps = 16/304 (5%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
F+K+ KI EGTYG+VY+AR+K +GE+VALKK+++ D G P +++REI++L
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL------DTETEGVPSTAIREISLLKE 57
Query: 73 FDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLME-SMKQPFSTSEVKCLMLQLLEGVK 131
+HP+IV + +V+ + + +Y+V E++ DLK M+ S +K + QLL+G+
Sbjct: 58 LNHPNIVKLLDVIHTE-NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 116
Query: 132 YLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLG 191
+ H + VLHRDLK NLL+N +G +K+ DFG++R +G P++ YT VVTLWYRAPE+LLG
Sbjct: 117 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG 176
Query: 192 AKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGA 251
K YSTAVD+WS+GCI AE++ ++ LF G +E+DQ+ +IF+TLGTP E +WPG++ +P
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 236
Query: 252 KANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHE 311
K +F K R+ F P L E G LL+++L YDP KRI+ AL H +F +
Sbjct: 237 KPSFPKWA----RQDFSKV----VPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 288
Query: 312 VPLP 315
V P
Sbjct: 289 VTKP 292
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 275 bits (703), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 137/311 (44%), Positives = 203/311 (65%), Gaps = 16/311 (5%)
Query: 6 GCRSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLR 65
G S+ F+K+ KI EGTYG+VY+AR+K +GE+VALKK+++ D G P +++R
Sbjct: 1 GPGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL------DTETEGVPSTAIR 54
Query: 66 EINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLME-SMKQPFSTSEVKCLML 124
EI++L +HP+IV + +V+ + + +Y+V E++ DLK M+ S +K +
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTE-NKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYLF 113
Query: 125 QLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYR 184
QLL+G+ + H + VLHRDLK NLL+N +G +K+ DFG++R +G P++ Y VVTLWYR
Sbjct: 114 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR 173
Query: 185 APELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPG 244
APE+LLG K YSTAVD+WS+GCI AE++ ++ LF G +E+DQ+ +IF+TLGTP E +WPG
Sbjct: 174 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 233
Query: 245 LSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDAL 304
++ +P K +F K K P L E G LL+++L YDP KRI+ AL
Sbjct: 234 VTSMPDYKPSFPKWARQDFSKVVPP--------LDEDGRSLLSQMLHYDPNKRISAKAAL 285
Query: 305 NHYWFHEVPLP 315
H +F +V P
Sbjct: 286 AHPFFQDVTKP 296
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 275 bits (703), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 136/304 (44%), Positives = 201/304 (66%), Gaps = 16/304 (5%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
F+K+ KI EGTYG+VY+AR+K +GE+VALKK+++ D G P +++REI++L
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL------DTETEGVPSTAIREISLLKE 57
Query: 73 FDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLME-SMKQPFSTSEVKCLMLQLLEGVK 131
+HP+IV + +V+ + + +Y+V E++ DLK M+ S +K + QLL+G+
Sbjct: 58 LNHPNIVKLLDVIHTE-NKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLA 116
Query: 132 YLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLG 191
+ H + VLHRDLK NLL+N +G +K+ DFG++R +G P++ YT VVTLWYRAPE+LLG
Sbjct: 117 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG 176
Query: 192 AKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGA 251
K YSTAVD+WS+GCI AE++ ++ LF G +E+DQ+ +IF+TLGTP E +WPG++ +P
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 236
Query: 252 KANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHE 311
K +F K K P L E G LL+++L YDP KRI+ AL H +F +
Sbjct: 237 KPSFPKWARQDFSKVVPP--------LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 288
Query: 312 VPLP 315
V P
Sbjct: 289 VTKP 292
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 275 bits (702), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 137/311 (44%), Positives = 203/311 (65%), Gaps = 16/311 (5%)
Query: 6 GCRSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLR 65
G S+ F+K+ KI EGTYG+VY+AR+K +GE+VALKK+++ D G P +++R
Sbjct: 1 GPGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL------DTETEGVPSTAIR 54
Query: 66 EINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLME-SMKQPFSTSEVKCLML 124
EI++L +HP+IV + +V+ + + +Y+V E++ DLK M+ S +K +
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTE-NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF 113
Query: 125 QLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYR 184
QLL+G+ + H + VLHRDLK NLL+N +G +K+ DFG++R +G P++ Y VVTLWYR
Sbjct: 114 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR 173
Query: 185 APELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPG 244
APE+LLG K YSTAVD+WS+GCI AE++ ++ LF G +E+DQ+ +IF+TLGTP E +WPG
Sbjct: 174 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 233
Query: 245 LSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDAL 304
++ +P K +F K K P L E G LL+++L YDP KRI+ AL
Sbjct: 234 VTSMPDYKPSFPKWARQDFSKVVPP--------LDEDGRSLLSQMLHYDPNKRISAKAAL 285
Query: 305 NHYWFHEVPLP 315
H +F +V P
Sbjct: 286 AHPFFQDVTKP 296
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 275 bits (702), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 137/311 (44%), Positives = 204/311 (65%), Gaps = 16/311 (5%)
Query: 6 GCRSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLR 65
G S+ F+K+ KI EGTYG+VY+AR+K +GE+VALKK+++ D G P +++R
Sbjct: 1 GPGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL------DTETEGVPSTAIR 54
Query: 66 EINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLME-SMKQPFSTSEVKCLML 124
EI++L +HP+IV + +V+ + + +Y+V E+++ DLK M+ S +K +
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTE-NKLYLVFEHVDQDLKKFMDASALTGIPLPLIKSYLF 113
Query: 125 QLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYR 184
QLL+G+ + H + VLHRDLK NLL+N +G +K+ DFG++R +G P++ Y VVTLWYR
Sbjct: 114 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR 173
Query: 185 APELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPG 244
APE+LLG K YSTAVD+WS+GCI AE++ ++ LF G +E+DQ+ +IF+TLGTP E +WPG
Sbjct: 174 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 233
Query: 245 LSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDAL 304
++ +P K +F K K P L E G LL+++L YDP KRI+ AL
Sbjct: 234 VTSMPDYKPSFPKWARQDFSKVVPP--------LDEDGRSLLSQMLHYDPNKRISAKAAL 285
Query: 305 NHYWFHEVPLP 315
H +F +V P
Sbjct: 286 AHPFFQDVTKP 296
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 274 bits (701), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 136/308 (44%), Positives = 202/308 (65%), Gaps = 16/308 (5%)
Query: 9 SVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREIN 68
S+ F+K+ KI EGTYG+VY+AR+K +GE+VALKK+++ D G P +++REI+
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL------DTETEGVPSTAIREIS 55
Query: 69 ILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLME-SMKQPFSTSEVKCLMLQLL 127
+L +HP+IV + +V+ + + +Y+V E++ DLK M+ S +K + QLL
Sbjct: 56 LLKELNHPNIVKLLDVIHTE-NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLL 114
Query: 128 EGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPE 187
+G+ + H + VLHRDLK NLL+N +G +K+ DFG++R +G P++ Y VVTLWYRAPE
Sbjct: 115 QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPE 174
Query: 188 LLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSE 247
+LLG K YSTAVD+WS+GCI AE++ ++ LF G +E+DQ+ +IF+TLGTP E +WPG++
Sbjct: 175 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS 234
Query: 248 LPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHY 307
+P K +F K K P L E G LL+++L YDP KRI+ AL H
Sbjct: 235 MPDYKPSFPKWARQDFSKVVPP--------LDEDGRSLLSQMLHYDPNKRISAKAALAHP 286
Query: 308 WFHEVPLP 315
+F +V P
Sbjct: 287 FFQDVTKP 294
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 274 bits (701), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 136/308 (44%), Positives = 202/308 (65%), Gaps = 16/308 (5%)
Query: 9 SVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREIN 68
S+ F+K+ KI EGTYG+VY+AR+K +GE+VALKK+++ D G P +++REI+
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL------DTETEGVPSTAIREIS 56
Query: 69 ILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLME-SMKQPFSTSEVKCLMLQLL 127
+L +HP+IV + +V+ + + +Y+V E++ DLK M+ S +K + QLL
Sbjct: 57 LLKELNHPNIVKLLDVIHTE-NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLL 115
Query: 128 EGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPE 187
+G+ + H + VLHRDLK NLL+N +G +K+ DFG++R +G P++ Y VVTLWYRAPE
Sbjct: 116 QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPE 175
Query: 188 LLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSE 247
+LLG K YSTAVD+WS+GCI AE++ ++ LF G +E+DQ+ +IF+TLGTP E +WPG++
Sbjct: 176 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS 235
Query: 248 LPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHY 307
+P K +F K K P L E G LL+++L YDP KRI+ AL H
Sbjct: 236 MPDYKPSFPKWARQDFSKVVPP--------LDEDGRSLLSQMLHYDPNKRISAKAALAHP 287
Query: 308 WFHEVPLP 315
+F +V P
Sbjct: 288 FFQDVTKP 295
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 274 bits (700), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 136/308 (44%), Positives = 202/308 (65%), Gaps = 16/308 (5%)
Query: 9 SVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREIN 68
S+ F+K+ KI EGTYG+VY+AR+K +GE+VALKK+++ D G P +++REI+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL------DTETEGVPSTAIREIS 57
Query: 69 ILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLME-SMKQPFSTSEVKCLMLQLL 127
+L +HP+IV + +V+ + + +Y+V E++ DLK M+ S +K + QLL
Sbjct: 58 LLKELNHPNIVKLLDVIHTE-NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLL 116
Query: 128 EGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPE 187
+G+ + H + VLHRDLK NLL+N +G +K+ DFG++R +G P++ Y VVTLWYRAPE
Sbjct: 117 QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPE 176
Query: 188 LLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSE 247
+LLG K YSTAVD+WS+GCI AE++ ++ LF G +E+DQ+ +IF+TLGTP E +WPG++
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS 236
Query: 248 LPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHY 307
+P K +F K K P L E G LL+++L YDP KRI+ AL H
Sbjct: 237 MPDYKPSFPKWARQDFSKVVPP--------LDEDGRSLLSQMLHYDPNKRISAKAALAHP 288
Query: 308 WFHEVPLP 315
+F +V P
Sbjct: 289 FFQDVTKP 296
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 274 bits (700), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 136/308 (44%), Positives = 202/308 (65%), Gaps = 16/308 (5%)
Query: 9 SVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREIN 68
S+ F+K+ KI EGTYG+VY+AR+K +GE+VALKK+++ D G P +++REI+
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL------DTETEGVPSTAIREIS 56
Query: 69 ILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLME-SMKQPFSTSEVKCLMLQLL 127
+L +HP+IV + +V+ + + +Y+V E++ DLK M+ S +K + QLL
Sbjct: 57 LLKELNHPNIVKLLDVIHTE-NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLL 115
Query: 128 EGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPE 187
+G+ + H + VLHRDLK NLL+N +G +K+ DFG++R +G P++ Y VVTLWYRAPE
Sbjct: 116 QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPE 175
Query: 188 LLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSE 247
+LLG K YSTAVD+WS+GCI AE++ ++ LF G +E+DQ+ +IF+TLGTP E +WPG++
Sbjct: 176 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS 235
Query: 248 LPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHY 307
+P K +F K K P L E G LL+++L YDP KRI+ AL H
Sbjct: 236 MPDYKPSFPKWARQDFSKVVPP--------LDEDGRSLLSQMLHYDPNKRISAKAALAHP 287
Query: 308 WFHEVPLP 315
+F +V P
Sbjct: 288 FFQDVTKP 295
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 274 bits (700), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 136/308 (44%), Positives = 202/308 (65%), Gaps = 16/308 (5%)
Query: 9 SVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREIN 68
S+ F+K+ KI EGTYG+VY+AR+K +GE+VALKK+++ D G P +++REI+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL------DTETEGVPSTAIREIS 54
Query: 69 ILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLME-SMKQPFSTSEVKCLMLQLL 127
+L +HP+IV + +V+ + + +Y+V E++ DLK M+ S +K + QLL
Sbjct: 55 LLKELNHPNIVKLLDVIHTE-NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLL 113
Query: 128 EGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPE 187
+G+ + H + VLHRDLK NLL+N +G +K+ DFG++R +G P++ Y VVTLWYRAPE
Sbjct: 114 QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPE 173
Query: 188 LLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSE 247
+LLG K YSTAVD+WS+GCI AE++ ++ LF G +E+DQ+ +IF+TLGTP E +WPG++
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS 233
Query: 248 LPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHY 307
+P K +F K K P L E G LL+++L YDP KRI+ AL H
Sbjct: 234 MPDYKPSFPKWARQDFSKVVPP--------LDEDGRSLLSQMLHYDPNKRISAKAALAHP 285
Query: 308 WFHEVPLP 315
+F +V P
Sbjct: 286 FFQDVTKP 293
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 274 bits (700), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 136/308 (44%), Positives = 202/308 (65%), Gaps = 16/308 (5%)
Query: 9 SVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREIN 68
S+ F+K+ KI EGTYG+VY+AR+K +GE+VALKK+++ D G P +++REI+
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL------DTETEGVPSTAIREIS 56
Query: 69 ILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLME-SMKQPFSTSEVKCLMLQLL 127
+L +HP+IV + +V+ + + +Y+V E++ DLK M+ S +K + QLL
Sbjct: 57 LLKELNHPNIVKLLDVIHTE-NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLL 115
Query: 128 EGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPE 187
+G+ + H + VLHRDLK NLL+N +G +K+ DFG++R +G P++ Y VVTLWYRAPE
Sbjct: 116 QGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPE 175
Query: 188 LLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSE 247
+LLG K YSTAVD+WS+GCI AE++ ++ LF G +E+DQ+ +IF+TLGTP E +WPG++
Sbjct: 176 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS 235
Query: 248 LPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHY 307
+P K +F K K P L E G LL+++L YDP KRI+ AL H
Sbjct: 236 MPDYKPSFPKWARQDFSKVVPP--------LDEDGRSLLSQMLHYDPNKRISAKAALAHP 287
Query: 308 WFHEVPLP 315
+F +V P
Sbjct: 288 FFQDVTKP 295
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 274 bits (700), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 137/308 (44%), Positives = 204/308 (66%), Gaps = 16/308 (5%)
Query: 9 SVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREIN 68
S+ F+K+ KI EGTYG+VY+AR+K +GE+VALKK+++ D G P +++REI+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL------DTETEGVPSTAIREIS 54
Query: 69 ILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLME-SMKQPFSTSEVKCLMLQLL 127
+L +HP+IV + +V+ + + +Y+V E++ DLK M+ S +K + QLL
Sbjct: 55 LLKELNHPNIVKLLDVIHTE-NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLL 113
Query: 128 EGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPE 187
+G+ + H + VLHRDLK NLL+N +G +K+ DFG++R +G P++ Y VVTLWYRAPE
Sbjct: 114 QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPE 173
Query: 188 LLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSE 247
+LLG K YSTAVD+WS+GCI AE++ ++ LF G +E+DQ+ +IF+TLGTP E +WPG++
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS 233
Query: 248 LPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHY 307
+P K +F K R+ F P L E G LL+++L YDP KRI+ AL H
Sbjct: 234 MPDYKPSFPKWA----RQDFSKV----VPPLDEDGRSLLSQMLHYDPNKRISAKAALAHP 285
Query: 308 WFHEVPLP 315
+F +V P
Sbjct: 286 FFQDVTKP 293
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 274 bits (700), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 136/308 (44%), Positives = 202/308 (65%), Gaps = 16/308 (5%)
Query: 9 SVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREIN 68
S+ F+K+ KI EGTYG+VY+AR+K +GE+VALKK+++ D G P +++REI+
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL------DTETEGVPSTAIREIS 58
Query: 69 ILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLME-SMKQPFSTSEVKCLMLQLL 127
+L +HP+IV + +V+ + + +Y+V E++ DLK M+ S +K + QLL
Sbjct: 59 LLKELNHPNIVKLLDVIHTE-NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLL 117
Query: 128 EGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPE 187
+G+ + H + VLHRDLK NLL+N +G +K+ DFG++R +G P++ Y VVTLWYRAPE
Sbjct: 118 QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPE 177
Query: 188 LLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSE 247
+LLG K YSTAVD+WS+GCI AE++ ++ LF G +E+DQ+ +IF+TLGTP E +WPG++
Sbjct: 178 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS 237
Query: 248 LPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHY 307
+P K +F K K P L E G LL+++L YDP KRI+ AL H
Sbjct: 238 MPDYKPSFPKWARQDFSKVVPP--------LDEDGRSLLSQMLHYDPNKRISAKAALAHP 289
Query: 308 WFHEVPLP 315
+F +V P
Sbjct: 290 FFQDVTKP 297
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 273 bits (699), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 135/304 (44%), Positives = 200/304 (65%), Gaps = 16/304 (5%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
F+K+ KI EGTYG+VY+AR+K +GE+VAL K+++ D G P +++REI++L
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRL------DTETEGVPSTAIREISLLKE 58
Query: 73 FDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLME-SMKQPFSTSEVKCLMLQLLEGVK 131
+HP+IV + +V+ + + +Y+V E++ DLK M+ S +K + QLL+G+
Sbjct: 59 LNHPNIVKLLDVIHTE-NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 132 YLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLG 191
+ H + VLHRDLK NLL+N +G +K+ DFG++R +G P++ YT VVTLWYRAPE+LLG
Sbjct: 118 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG 177
Query: 192 AKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGA 251
K YSTAVD+WS+GCI AE++ ++ LF G +E+DQ+ +IF+TLGTP E +WPG++ +P
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 237
Query: 252 KANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHE 311
K +F K K P L E G LL+++L YDP KRI+ AL H +F +
Sbjct: 238 KPSFPKWARQDFSKVVPP--------LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
Query: 312 VPLP 315
V P
Sbjct: 290 VTKP 293
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 273 bits (699), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 135/304 (44%), Positives = 200/304 (65%), Gaps = 16/304 (5%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
F+K+ KI EGTYG+VY+AR+K +GE+VAL K+++ D G P +++REI++L
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRL------DTETEGVPSTAIREISLLKE 57
Query: 73 FDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLME-SMKQPFSTSEVKCLMLQLLEGVK 131
+HP+IV + +V+ + + +Y+V E++ DLK M+ S +K + QLL+G+
Sbjct: 58 LNHPNIVKLLDVIHTE-NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 116
Query: 132 YLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLG 191
+ H + VLHRDLK NLL+N +G +K+ DFG++R +G P++ YT VVTLWYRAPE+LLG
Sbjct: 117 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG 176
Query: 192 AKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGA 251
K YSTAVD+WS+GCI AE++ ++ LF G +E+DQ+ +IF+TLGTP E +WPG++ +P
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 236
Query: 252 KANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHE 311
K +F K K P L E G LL+++L YDP KRI+ AL H +F +
Sbjct: 237 KPSFPKWARQDFSKVVPP--------LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 288
Query: 312 VPLP 315
V P
Sbjct: 289 VTKP 292
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 273 bits (699), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 136/308 (44%), Positives = 202/308 (65%), Gaps = 16/308 (5%)
Query: 9 SVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREIN 68
S+ F+K+ KI EGTYG+VY+AR+K +GE+VALKK+++ D G P +++REI+
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL------DTETEGVPSTAIREIS 55
Query: 69 ILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLME-SMKQPFSTSEVKCLMLQLL 127
+L +HP+IV + +V+ + + +Y+V E++ DLK M+ S +K + QLL
Sbjct: 56 LLKELNHPNIVKLLDVIHTE-NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLL 114
Query: 128 EGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPE 187
+G+ + H + VLHRDLK NLL+N +G +K+ DFG++R +G P++ Y VVTLWYRAPE
Sbjct: 115 QGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPE 174
Query: 188 LLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSE 247
+LLG K YSTAVD+WS+GCI AE++ ++ LF G +E+DQ+ +IF+TLGTP E +WPG++
Sbjct: 175 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS 234
Query: 248 LPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHY 307
+P K +F K K P L E G LL+++L YDP KRI+ AL H
Sbjct: 235 MPDYKPSFPKWARQDFSKVVPP--------LDEDGRSLLSQMLHYDPNKRISAKAALAHP 286
Query: 308 WFHEVPLP 315
+F +V P
Sbjct: 287 FFQDVTKP 294
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 273 bits (699), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 136/308 (44%), Positives = 202/308 (65%), Gaps = 16/308 (5%)
Query: 9 SVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREIN 68
S+ F+K+ KI EGTYG+VY+AR+K +GE+VALKK+++ D G P +++REI+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL------DTETEGVPSTAIREIS 54
Query: 69 ILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLME-SMKQPFSTSEVKCLMLQLL 127
+L +HP+IV + +V+ + + +Y+V E++ DLK M+ S +K + QLL
Sbjct: 55 LLKELNHPNIVKLLDVIHTE-NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLL 113
Query: 128 EGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPE 187
+G+ + H + VLHRDLK NLL+N +G +K+ DFG++R +G P++ Y VVTLWYRAPE
Sbjct: 114 QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPE 173
Query: 188 LLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSE 247
+LLG K YSTAVD+WS+GCI AE++ ++ LF G +E+DQ+ +IF+TLGTP E +WPG++
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS 233
Query: 248 LPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHY 307
+P K +F K K P L E G LL+++L YDP KRI+ AL H
Sbjct: 234 MPDYKPSFPKWARQDFSKVVPP--------LDEDGRSLLSQMLHYDPNKRISAKAALAHP 285
Query: 308 WFHEVPLP 315
+F +V P
Sbjct: 286 FFQDVTKP 293
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 273 bits (699), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 136/304 (44%), Positives = 202/304 (66%), Gaps = 16/304 (5%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
F+K+ KI EGTYG+VY+AR+K +GE+VALKK+++ D G P +++REI++L
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL------DTETEGVPSTAIREISLLKE 57
Query: 73 FDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLME-SMKQPFSTSEVKCLMLQLLEGVK 131
+HP+IV + +V+ + + +Y+V E++ DLK M+ S +K + QLL+G+
Sbjct: 58 LNHPNIVKLLDVIHTE-NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 116
Query: 132 YLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLG 191
+ H + VLHRDLK NLL+N +G +K+ DFG++R +G P++ Y VVTLWYRAPE+LLG
Sbjct: 117 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 176
Query: 192 AKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGA 251
K YSTAVD+WS+GCI AE++ ++ LF G +E+DQ+ +IF+TLGTP E +WPG++ +P
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 236
Query: 252 KANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHE 311
K +F K R+ F P L E G LL+++L YDP KRI+ AL H +F +
Sbjct: 237 KPSFPKWA----RQDFSKV----VPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 288
Query: 312 VPLP 315
V P
Sbjct: 289 VTKP 292
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 273 bits (698), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 136/308 (44%), Positives = 202/308 (65%), Gaps = 16/308 (5%)
Query: 9 SVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREIN 68
S+ F+K+ KI EGTYG+VY+AR+K +GE+VALKK+++ D G P +++REI+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL------DTETEGVPSTAIREIS 54
Query: 69 ILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLME-SMKQPFSTSEVKCLMLQLL 127
+L +HP+IV + +V+ + + +Y+V E++ DLK M+ S +K + QLL
Sbjct: 55 LLKELNHPNIVKLLDVIHTE-NKLYLVFEFLHQDLKDFMDASALTGIPLPLIKSYLFQLL 113
Query: 128 EGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPE 187
+G+ + H + VLHRDLK NLL+N +G +K+ DFG++R +G P++ Y VVTLWYRAPE
Sbjct: 114 QGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPE 173
Query: 188 LLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSE 247
+LLG K YSTAVD+WS+GCI AE++ ++ LF G +E+DQ+ +IF+TLGTP E +WPG++
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS 233
Query: 248 LPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHY 307
+P K +F K K P L E G LL+++L YDP KRI+ AL H
Sbjct: 234 MPDYKPSFPKWARQDFSKVVPP--------LDEDGRSLLSQMLHYDPNKRISAKAALAHP 285
Query: 308 WFHEVPLP 315
+F +V P
Sbjct: 286 FFQDVTKP 293
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 273 bits (698), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 135/304 (44%), Positives = 200/304 (65%), Gaps = 16/304 (5%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
F+K+ KI EGTYG+VY+AR+K +GE+VALKK+++ D G P +++REI++L
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL------DTETEGVPSTAIREISLLKE 57
Query: 73 FDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLME-SMKQPFSTSEVKCLMLQLLEGVK 131
+HP+IV + +V+ + + +Y+V E++ DLK M+ S +K + QLL+G+
Sbjct: 58 LNHPNIVKLLDVIHTE-NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 116
Query: 132 YLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLG 191
+ H + VLHRDLK NLL+N +G +K+ DFG++R +G P++ Y VVTLWYRAPE+LLG
Sbjct: 117 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 176
Query: 192 AKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGA 251
K YSTAVD+WS+GCI AE++ ++ LF G +E+DQ+ +IF+TLGTP E +WPG++ +P
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 236
Query: 252 KANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHE 311
K +F K K P L E G LL+++L YDP KRI+ AL H +F +
Sbjct: 237 KPSFPKWARQDFSKVVPP--------LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 288
Query: 312 VPLP 315
V P
Sbjct: 289 VTKP 292
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 273 bits (698), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 135/304 (44%), Positives = 200/304 (65%), Gaps = 16/304 (5%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
F+K+ KI EGTYG+VY+AR+K +GE+VALKK+++ D G P +++REI++L
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL------DTETEGVPSTAIREISLLKE 59
Query: 73 FDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLME-SMKQPFSTSEVKCLMLQLLEGVK 131
+HP+IV + +V+ + + +Y+V E++ DLK M+ S +K + QLL+G+
Sbjct: 60 LNHPNIVKLLDVIHTE-NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 118
Query: 132 YLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLG 191
+ H + VLHRDLK NLL+N +G +K+ DFG++R +G P++ Y VVTLWYRAPE+LLG
Sbjct: 119 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 178
Query: 192 AKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGA 251
K YSTAVD+WS+GCI AE++ ++ LF G +E+DQ+ +IF+TLGTP E +WPG++ +P
Sbjct: 179 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 238
Query: 252 KANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHE 311
K +F K K P L E G LL+++L YDP KRI+ AL H +F +
Sbjct: 239 KPSFPKWARQDFSKVVPP--------LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 290
Query: 312 VPLP 315
V P
Sbjct: 291 VTKP 294
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 273 bits (697), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 136/308 (44%), Positives = 202/308 (65%), Gaps = 16/308 (5%)
Query: 9 SVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREIN 68
S+ F+K+ KI EGTYG+VY+AR+K +GE+VALKK+++ D G P +++REI+
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL------DTETEGVPSTAIREIS 55
Query: 69 ILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLME-SMKQPFSTSEVKCLMLQLL 127
+L +HP+IV + +V+ + + +Y+V E++ DLK M+ S +K + QLL
Sbjct: 56 LLKELNHPNIVKLLDVIHTE-NKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLL 114
Query: 128 EGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPE 187
+G+ + H + VLHRDLK NLL+N +G +K+ DFG++R +G P++ Y VVTLWYRAPE
Sbjct: 115 QGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPE 174
Query: 188 LLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSE 247
+LLG K YSTAVD+WS+GCI AE++ ++ LF G +E+DQ+ +IF+TLGTP E +WPG++
Sbjct: 175 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS 234
Query: 248 LPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHY 307
+P K +F K K P L E G LL+++L YDP KRI+ AL H
Sbjct: 235 MPDYKPSFPKWARQDFSKVVPP--------LDEDGRSLLSQMLHYDPNKRISAKAALAHP 286
Query: 308 WFHEVPLP 315
+F +V P
Sbjct: 287 FFQDVTKP 294
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 273 bits (697), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 136/308 (44%), Positives = 202/308 (65%), Gaps = 16/308 (5%)
Query: 9 SVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREIN 68
S+ F+K+ KI EGTYG+VY+AR+K +GE+VALKK+++ D G P +++REI+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL------DTETEGVPSTAIREIS 57
Query: 69 ILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLME-SMKQPFSTSEVKCLMLQLL 127
+L +HP+IV + +V+ + + +Y+V E++ DLK M+ S +K + QLL
Sbjct: 58 LLKELNHPNIVKLLDVIHTE-NKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLL 116
Query: 128 EGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPE 187
+G+ + H + VLHRDLK NLL+N +G +K+ DFG++R +G P++ Y VVTLWYRAPE
Sbjct: 117 QGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPE 176
Query: 188 LLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSE 247
+LLG K YSTAVD+WS+GCI AE++ ++ LF G +E+DQ+ +IF+TLGTP E +WPG++
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS 236
Query: 248 LPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHY 307
+P K +F K K P L E G LL+++L YDP KRI+ AL H
Sbjct: 237 MPDYKPSFPKWARQDFSKVVPP--------LDEDGRSLLSQMLHYDPNKRISAKAALAHP 288
Query: 308 WFHEVPLP 315
+F +V P
Sbjct: 289 FFQDVTKP 296
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 272 bits (696), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 136/308 (44%), Positives = 202/308 (65%), Gaps = 16/308 (5%)
Query: 9 SVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREIN 68
S+ F+K+ KI EGTYG+VY+AR+K +GE+VALKK+++ D G P +++REI+
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL------DTETEGVPSTAIREIS 56
Query: 69 ILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLME-SMKQPFSTSEVKCLMLQLL 127
+L +HP+IV + +V+ + + +Y+V E++ DLK M+ S +K + QLL
Sbjct: 57 LLKELNHPNIVKLLDVIHTE-NKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLL 115
Query: 128 EGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPE 187
+G+ + H + VLHRDLK NLL+N +G +K+ DFG++R +G P++ Y VVTLWYRAPE
Sbjct: 116 QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPE 175
Query: 188 LLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSE 247
+LLG K YSTAVD+WS+GCI AE++ ++ LF G +E+DQ+ +IF+TLGTP E +WPG++
Sbjct: 176 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS 235
Query: 248 LPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHY 307
+P K +F K K P L E G LL+++L YDP KRI+ AL H
Sbjct: 236 MPDYKPSFPKWARQDFSKVVPP--------LDEDGRSLLSQMLHYDPNKRISAKAALAHP 287
Query: 308 WFHEVPLP 315
+F +V P
Sbjct: 288 FFQDVTKP 295
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 272 bits (695), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 136/308 (44%), Positives = 202/308 (65%), Gaps = 16/308 (5%)
Query: 9 SVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREIN 68
S+ F+K+ KI EGTYG+VY+AR+K +GE+VALKK+++ D G P +++REI+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL------DTETEGVPSTAIREIS 57
Query: 69 ILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLME-SMKQPFSTSEVKCLMLQLL 127
+L +HP+IV + +V+ + + +Y+V E++ DLK M+ S +K + QLL
Sbjct: 58 LLKELNHPNIVKLLDVIHTE-NKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLL 116
Query: 128 EGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPE 187
+G+ + H + VLHRDLK NLL+N +G +K+ DFG++R +G P++ Y VVTLWYRAPE
Sbjct: 117 QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPE 176
Query: 188 LLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSE 247
+LLG K YSTAVD+WS+GCI AE++ ++ LF G +E+DQ+ +IF+TLGTP E +WPG++
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS 236
Query: 248 LPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHY 307
+P K +F K K P L E G LL+++L YDP KRI+ AL H
Sbjct: 237 MPDYKPSFPKWARQDFSKVVPP--------LDEDGRSLLSQMLHYDPNKRISAKAALAHP 288
Query: 308 WFHEVPLP 315
+F +V P
Sbjct: 289 FFQDVTKP 296
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 271 bits (693), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 135/304 (44%), Positives = 202/304 (66%), Gaps = 16/304 (5%)
Query: 9 SVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREIN 68
S+ F+K+ KI EGTYG+VY+AR+K +GE+VALKK+++ D G P +++REI+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL------DTETEGVPSTAIREIS 54
Query: 69 ILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLME-SMKQPFSTSEVKCLMLQLL 127
+L +HP+IV + +V+ + + +Y+V E++ DLK M+ S +K + QLL
Sbjct: 55 LLKELNHPNIVKLLDVIHTE-NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLL 113
Query: 128 EGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPE 187
+G+ + H + VLHRDLK NLL+N +G +K+ DFG++R +G P++ Y VVTLWYRAPE
Sbjct: 114 QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPE 173
Query: 188 LLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSE 247
+LLG K YSTAVD+WS+GCI AE++ ++ LF G +E+DQ+ +IF+TLGTP E +WPG++
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS 233
Query: 248 LPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHY 307
+P K +F K R+ F P L E G LL+++L YDP KRI+ AL H
Sbjct: 234 MPDYKPSFPKWA----RQDFSKV----VPPLDEDGRSLLSQMLHYDPNKRISAKAALAHP 285
Query: 308 WFHE 311
+F +
Sbjct: 286 FFQD 289
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 267 bits (683), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 132/301 (43%), Positives = 203/301 (67%), Gaps = 15/301 (4%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILL 71
+++KL K+ EGTYG+VY+A+D + G IVALK++++ D + G P +++REI++L
Sbjct: 22 KYQKLEKVGEGTYGVVYKAKDSQ-GRIVALKRIRL------DAEDEGIPSTAIREISLLK 74
Query: 72 SFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVK 131
HP+IV++ +V+ + + +V E+ME DLK +++ K S++K + QLL GV
Sbjct: 75 ELHHPNIVSLIDVIHSER-CLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVA 133
Query: 132 YLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLG 191
+ H + +LHRDLK NLL+N+ G LK+ DFG++R +G P++ YT VVTLWYRAP++L+G
Sbjct: 134 HCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMG 193
Query: 192 AKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGA 251
+KKYST+VD+WS+GCI AE++ KPLF G T+ DQ+ KIF LGTP WP + ELP
Sbjct: 194 SKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLW 253
Query: 252 KANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHE 311
K ++ + + K+ P +S P + G DLL+ +L +DP KRI+ DA+NH +F +
Sbjct: 254 K----QRTFQVFEKK-PWSSII--PGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKD 306
Query: 312 V 312
+
Sbjct: 307 L 307
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 267 bits (682), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 132/301 (43%), Positives = 203/301 (67%), Gaps = 15/301 (4%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILL 71
+++KL K+ EGTYG+VY+A+D + G IVALK++++ D + G P +++REI++L
Sbjct: 22 KYQKLEKVGEGTYGVVYKAKDSQ-GRIVALKRIRL------DAEDEGIPSTAIREISLLK 74
Query: 72 SFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVK 131
HP+IV++ +V+ + + +V E+ME DLK +++ K S++K + QLL GV
Sbjct: 75 ELHHPNIVSLIDVIHSER-CLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVA 133
Query: 132 YLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLG 191
+ H + +LHRDLK NLL+N+ G LK+ DFG++R +G P++ YT VVTLWYRAP++L+G
Sbjct: 134 HCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMG 193
Query: 192 AKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGA 251
+KKYST+VD+WS+GCI AE++ KPLF G T+ DQ+ KIF LGTP WP + ELP
Sbjct: 194 SKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLW 253
Query: 252 KANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHE 311
K ++ + + K+ P +S P + G DLL+ +L +DP KRI+ DA+NH +F +
Sbjct: 254 K----QRTFQVFEKK-PWSSII--PGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKD 306
Query: 312 V 312
+
Sbjct: 307 L 307
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 259 bits (662), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 136/300 (45%), Positives = 191/300 (63%), Gaps = 16/300 (5%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILL 71
++ L KI EGTYG+VY+A++ GE ALKK+++ KED G P +++REI+IL
Sbjct: 3 KYHGLEKIGEGTYGVVYKAQNN-YGETFALKKIRL---EKED---EGIPSTTIREISILK 55
Query: 72 SFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVK 131
H +IV + +V+ V +V E+++ DLK L++ + + K +LQLL G+
Sbjct: 56 ELKHSNIVKLYDVIHTKKRLV-LVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIA 114
Query: 132 YLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLG 191
Y HD VLHRDLK NLL+N +G LKI DFG++R +G P++ YT VVTLWYRAP++L+G
Sbjct: 115 YCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMG 174
Query: 192 AKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGA 251
+KKYST +D+WSVGCI AE++ PLF G +E DQ+ +IF+ LGTP WP ++ELP
Sbjct: 175 SKKYSTTIDIWSVGCIFAEMVNGAPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKY 234
Query: 252 KANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHE 311
NF + + P SF L ESG DLL+++L DP +RIT AL H +F E
Sbjct: 235 DPNFT------VYEPLPWESFLKG--LDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE 286
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 259 bits (661), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 136/300 (45%), Positives = 191/300 (63%), Gaps = 16/300 (5%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILL 71
++ L KI EGTYG+VY+A++ GE ALKK+++ KED G P +++REI+IL
Sbjct: 3 KYHGLEKIGEGTYGVVYKAQNN-YGETFALKKIRL---EKED---EGIPSTTIREISILK 55
Query: 72 SFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVK 131
H +IV + +V+ V +V E+++ DLK L++ + + K +LQLL G+
Sbjct: 56 ELKHSNIVKLYDVIHTKKRLV-LVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIA 114
Query: 132 YLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLG 191
Y HD VLHRDLK NLL+N +G LKI DFG++R +G P++ YT VVTLWYRAP++L+G
Sbjct: 115 YCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMG 174
Query: 192 AKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGA 251
+KKYST +D+WSVGCI AE++ PLF G +E DQ+ +IF+ LGTP WP ++ELP
Sbjct: 175 SKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKY 234
Query: 252 KANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHE 311
NF + + P SF L ESG DLL+++L DP +RIT AL H +F E
Sbjct: 235 DPNFT------VYEPLPWESFLKG--LDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE 286
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 258 bits (660), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 135/300 (45%), Positives = 191/300 (63%), Gaps = 16/300 (5%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILL 71
++ L KI EGTYG+VY+A++ GE ALKK+++ KED G P +++REI+IL
Sbjct: 3 KYHGLEKIGEGTYGVVYKAQNN-YGETFALKKIRL---EKED---EGIPSTTIREISILK 55
Query: 72 SFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVK 131
H +IV + +V+ V +V E+++ DLK L++ + + K +LQLL G+
Sbjct: 56 ELKHSNIVKLYDVIHTKKRLV-LVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIA 114
Query: 132 YLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLG 191
Y HD VLHRDLK NLL+N +G LKI DFG++R +G P++ YT +VTLWYRAP++L+G
Sbjct: 115 YCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMG 174
Query: 192 AKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGA 251
+KKYST +D+WSVGCI AE++ PLF G +E DQ+ +IF+ LGTP WP ++ELP
Sbjct: 175 SKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKY 234
Query: 252 KANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHE 311
NF + + P SF L ESG DLL+++L DP +RIT AL H +F E
Sbjct: 235 DPNFT------VYEPLPWESFLKG--LDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE 286
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 243 bits (621), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 132/307 (42%), Positives = 192/307 (62%), Gaps = 20/307 (6%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILL 71
++EKL KI EGTYG V++A+++++ EIVALK+V++ D + G P S+LREI +L
Sbjct: 3 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRL------DDDDEGVPSSALREICLLK 56
Query: 72 SFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVK 131
H +IV + +V+ D + +V E+ + DLK +S VK + QLL+G+
Sbjct: 57 ELKHKNIVRLHDVLHSDK-KLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLG 115
Query: 132 YLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLG 191
+ H VLHRDLK NLL+N G LK+ DFG++R +G P++ Y++ VVTLWYR P++L G
Sbjct: 116 FCHSRNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFG 175
Query: 192 AKKYSTAVDMWSVGCIMAELL-AKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPG 250
AK YST++DMWS GCI AEL A +PLF G DQ+ +IF+ LGTPTE WP +++LP
Sbjct: 176 AKLYSTSIDMWSAGCIFAELANAARPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPD 235
Query: 251 AKANFAKQPYNLLRKRFPAAS--FTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYW 308
K PY + +PA + P L+ +G DLL LL +P +RI+ ++AL H +
Sbjct: 236 YK------PYPM----YPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPY 285
Query: 309 FHEVPLP 315
F + P
Sbjct: 286 FSDFCPP 292
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 241 bits (615), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 131/307 (42%), Positives = 192/307 (62%), Gaps = 20/307 (6%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILL 71
++EKL KI EGTYG V++A+++++ EIVALK+V++ D + G P S+LREI +L
Sbjct: 3 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRL------DDDDEGVPSSALREICLLK 56
Query: 72 SFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVK 131
H +IV + +V+ D + +V E+ + DLK +S VK + QLL+G+
Sbjct: 57 ELKHKNIVRLHDVLHSDK-KLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLG 115
Query: 132 YLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLG 191
+ H VLHRDLK NLL+N G LK+ +FG++R +G P++ Y++ VVTLWYR P++L G
Sbjct: 116 FCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFG 175
Query: 192 AKKYSTAVDMWSVGCIMAELL-AKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPG 250
AK YST++DMWS GCI AEL A +PLF G DQ+ +IF+ LGTPTE WP +++LP
Sbjct: 176 AKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPD 235
Query: 251 AKANFAKQPYNLLRKRFPAAS--FTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYW 308
K PY + +PA + P L+ +G DLL LL +P +RI+ ++AL H +
Sbjct: 236 YK------PYPM----YPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPY 285
Query: 309 FHEVPLP 315
F + P
Sbjct: 286 FSDFCPP 292
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 239 bits (611), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 124/304 (40%), Positives = 184/304 (60%), Gaps = 13/304 (4%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILL 71
+EKL+ + EG + VY+ARDK + +IVA+KK+K+ G + + + G ++LREI +L
Sbjct: 11 RYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKL--GHRSEAKD-GINRTALREIKLLQ 67
Query: 72 SFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVK 131
HP+I+ + + ++ +V ++ME DL+ +++ + S +K ML L+G++
Sbjct: 68 ELSHPNIIGLLDA-FGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLE 126
Query: 132 YLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLG 191
YLH +W+LHRDLK +NLLL+ GVLK+ DFG+++ +GSP + Y VVT WYRAPELL G
Sbjct: 127 YLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVVTRWYRAPELLFG 186
Query: 192 AKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGA 251
A+ Y VDMW+VGCI+AELL + P G +++DQ+ +IF+TLGTPTE WP + LP
Sbjct: 187 ARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDY 246
Query: 252 KANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHE 311
F P L F AA + DL+ L ++P RIT AL +F
Sbjct: 247 -VTFKSFPGIPLHHIFSAA--------GDDLLDLIQGLFLFNPCARITATQALKMKYFSN 297
Query: 312 VPLP 315
P P
Sbjct: 298 RPGP 301
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 234 bits (597), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 121/308 (39%), Positives = 195/308 (63%), Gaps = 16/308 (5%)
Query: 9 SVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREIN 68
S +F++L K+ GTY VY+ +K +G VALK+VK++ E G P +++REI+
Sbjct: 3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDS-------EEGTPSTAIREIS 55
Query: 69 ILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMK-----QPFSTSEVKCLM 123
++ H +IV + +V+ + + + +V E+M++DLK M+S + + VK
Sbjct: 56 LMKELKHENIVRLYDVIHTE-NKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQ 114
Query: 124 LQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWY 183
QLL+G+ + H+N +LHRDLK NLL+N +G LK+ DFG++R +G P+ ++S VVTLWY
Sbjct: 115 WQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWY 174
Query: 184 RAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWP 243
RAP++L+G++ YST++D+WS GCI+AE++ KPLF GT + +Q+ IF +GTP E++WP
Sbjct: 175 RAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWP 234
Query: 244 GLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDA 303
+++LP N ++P LR+ T P L + D L+ LL +P+ R++ A
Sbjct: 235 SVTKLPKYNPNIQQRPPRDLRQVL--QPHTKEP-LDGNLMDFLHGLLQLNPDMRLSAKQA 291
Query: 304 LNHYWFHE 311
L+H WF E
Sbjct: 292 LHHPWFAE 299
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 229 bits (585), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 128/321 (39%), Positives = 184/321 (57%), Gaps = 24/321 (7%)
Query: 7 CRSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLRE 66
C V ++EKL KI +GT+G V++AR +K+G+ VALKKV M KE GFPI++LRE
Sbjct: 14 CDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLME-NEKE-----GFPITALRE 67
Query: 67 INILLSFDHPSIVNVKEVVMDDHD-------SVYMVMEYMEHDLKWLMESMKQPFSTSEV 119
I IL H ++VN+ E+ S+Y+V ++ EHDL L+ ++ F+ SE+
Sbjct: 68 IKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEI 127
Query: 120 KCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQY----GSPLKPYT 175
K +M LL G+ Y+H N +LHRD+K +N+L+ GVLK+ DFG++R + S Y
Sbjct: 128 KRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYX 187
Query: 176 SLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLG 235
+ VVTLWYR PELLLG + Y +D+W GCIMAE+ + P+ G TE Q+ I + G
Sbjct: 188 NRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCG 247
Query: 236 TPTETIWPGLSELP-GAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDP 294
+ T +WP + K K ++ R A V DL+++LL DP
Sbjct: 248 SITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAY------VRDPYALDLIDKLLVLDP 301
Query: 295 EKRITVDDALNHYWFHEVPLP 315
+RI DDALNH +F P+P
Sbjct: 302 AQRIDSDDALNHDFFWSDPMP 322
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 229 bits (584), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 128/321 (39%), Positives = 184/321 (57%), Gaps = 24/321 (7%)
Query: 7 CRSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLRE 66
C V ++EKL KI +GT+G V++AR +K+G+ VALKKV M KE GFPI++LRE
Sbjct: 14 CDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLME-NEKE-----GFPITALRE 67
Query: 67 INILLSFDHPSIVNVKEVVMDDHD-------SVYMVMEYMEHDLKWLMESMKQPFSTSEV 119
I IL H ++VN+ E+ S+Y+V ++ EHDL L+ ++ F+ SE+
Sbjct: 68 IKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEI 127
Query: 120 KCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQY----GSPLKPYT 175
K +M LL G+ Y+H N +LHRD+K +N+L+ GVLK+ DFG++R + S Y
Sbjct: 128 KRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYX 187
Query: 176 SLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLG 235
+ VVTLWYR PELLLG + Y +D+W GCIMAE+ + P+ G TE Q+ I + G
Sbjct: 188 NRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCG 247
Query: 236 TPTETIWPGLSELP-GAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDP 294
+ T +WP + K K ++ R A V DL+++LL DP
Sbjct: 248 SITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAY------VRDPYALDLIDKLLVLDP 301
Query: 295 EKRITVDDALNHYWFHEVPLP 315
+RI DDALNH +F P+P
Sbjct: 302 AQRIDSDDALNHDFFWSDPMP 322
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 229 bits (584), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 128/321 (39%), Positives = 185/321 (57%), Gaps = 24/321 (7%)
Query: 7 CRSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLRE 66
C V ++EKL KI +GT+G V++AR +K+G+ VALKKV M KE GFPI++LRE
Sbjct: 14 CDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLME-NEKE-----GFPITALRE 67
Query: 67 INILLSFDHPSIVNVKEVVMDDHD-------SVYMVMEYMEHDLKWLMESMKQPFSTSEV 119
I IL H ++VN+ E+ S+Y+V ++ EHDL L+ ++ F+ SE+
Sbjct: 68 IKILQLLKHENVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEI 127
Query: 120 KCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQY----GSPLKPYT 175
K +M LL G+ Y+H N +LHRD+K +N+L+ GVLK+ DFG++R + S Y
Sbjct: 128 KRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYX 187
Query: 176 SLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLG 235
+ VVTLWYR PELLLG + Y +D+W GCIMAE+ + P+ G TE Q+ I + G
Sbjct: 188 NRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCG 247
Query: 236 TPTETIWPGLSELP-GAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDP 294
+ T +WP + K K ++ R A + P DL+++LL DP
Sbjct: 248 SITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKA--YVRDPY----ALDLIDKLLVLDP 301
Query: 295 EKRITVDDALNHYWFHEVPLP 315
+RI DDALNH +F P+P
Sbjct: 302 AQRIDSDDALNHDFFWSDPMP 322
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 229 bits (583), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 128/321 (39%), Positives = 184/321 (57%), Gaps = 24/321 (7%)
Query: 7 CRSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLRE 66
C V ++EKL KI +GT+G V++AR +K+G+ VALKKV M KE GFPI++LRE
Sbjct: 13 CDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLME-NEKE-----GFPITALRE 66
Query: 67 INILLSFDHPSIVNVKEVVMDDHD-------SVYMVMEYMEHDLKWLMESMKQPFSTSEV 119
I IL H ++VN+ E+ S+Y+V ++ EHDL L+ ++ F+ SE+
Sbjct: 67 IKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEI 126
Query: 120 KCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQY----GSPLKPYT 175
K +M LL G+ Y+H N +LHRD+K +N+L+ GVLK+ DFG++R + S Y
Sbjct: 127 KRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYX 186
Query: 176 SLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLG 235
+ VVTLWYR PELLLG + Y +D+W GCIMAE+ + P+ G TE Q+ I + G
Sbjct: 187 NRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCG 246
Query: 236 TPTETIWPGLSELP-GAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDP 294
+ T +WP + K K ++ R A V DL+++LL DP
Sbjct: 247 SITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAY------VRDPYALDLIDKLLVLDP 300
Query: 295 EKRITVDDALNHYWFHEVPLP 315
+RI DDALNH +F P+P
Sbjct: 301 AQRIDSDDALNHDFFWSDPMP 321
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 226 bits (577), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 117/295 (39%), Positives = 177/295 (60%), Gaps = 15/295 (5%)
Query: 15 KLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFD 74
KL+K+ EGTY VY+ + K + +VALK++++ E G P +++RE+++L
Sbjct: 6 KLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEH-------EEGAPCTAIREVSLLKDLK 58
Query: 75 HPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLH 134
H +IV + +++ + S+ +V EY++ DLK ++ + VK + QLL G+ Y H
Sbjct: 59 HANIVTLHDIIHTE-KSLTLVFEYLDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCH 117
Query: 135 DNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGAKK 194
VLHRDLK NLL+N +G LK+ DFG++R P K Y + VVTLWYR P++LLG+
Sbjct: 118 RQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILLGSTD 177
Query: 195 YSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGAKAN 254
YST +DMW VGCI E+ +PLF G+T +Q+ IF+ LGTPTE WPG+ +N
Sbjct: 178 YSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGIL------SN 231
Query: 255 FAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWF 309
+ YN + R A + +P L G DLL +LL ++ RI+ +DA+ H +F
Sbjct: 232 EEFKTYNYPKYR-AEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFF 285
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 226 bits (575), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 121/307 (39%), Positives = 186/307 (60%), Gaps = 22/307 (7%)
Query: 9 SVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREIN 68
S+ + ++ K+ EGTYG VY+A D + E VA+K++++ + E G P +++RE++
Sbjct: 32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRL------EHEEEGVPGTAIREVS 85
Query: 69 ILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQP-FSTSEVKCLMLQLL 127
+L H +I+ +K V+ +H ++++ EY E+DLK M+ K P S +K + QL+
Sbjct: 86 LLKELQHRNIIELKSVIHHNH-RLHLIFEYAENDLKKYMD--KNPDVSMRVIKSFLYQLI 142
Query: 128 EGVKYLHDNWVLHRDLKTSNLLLN-----NQGVLKICDFGMSRQYGSPLKPYTSLVVTLW 182
GV + H LHRDLK NLLL+ VLKI DFG++R +G P++ +T ++TLW
Sbjct: 143 NGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITLW 202
Query: 183 YRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIW 242
YR PE+LLG++ YST+VD+WS+ CI AE+L K PLF G +E+DQ+ KIF+ LG P +T W
Sbjct: 203 YRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTW 262
Query: 243 PGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDD 302
PG++ LP K +F K L++ A L + +L DP KRI+ +
Sbjct: 263 PGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTA-------MLEMDPVKRISAKN 315
Query: 303 ALNHYWF 309
AL H +F
Sbjct: 316 ALEHPYF 322
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 220 bits (560), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 123/315 (39%), Positives = 192/315 (60%), Gaps = 27/315 (8%)
Query: 7 CRSVFEFEKLNKISEGTYGIVYRARD-KKSGEIVALKKVKMNVGRKEDCLEYGFPISSLR 65
CR+ ++E + +I EG YG V++ARD K G VALK+V++ G E G P+S++R
Sbjct: 7 CRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTG------EEGMPLSTIR 60
Query: 66 EINILL---SFDHPSIVNVKEVVM----DDHDSVYMVMEYMEHDLKWLMESMKQP-FSTS 117
E+ +L +F+HP++V + +V D + +V E+++ DL ++ + +P T
Sbjct: 61 EVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTE 120
Query: 118 EVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSL 177
+K +M QLL G+ +LH + V+HRDLK N+L+ + G +K+ DFG++R Y + TS+
Sbjct: 121 TIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA-LTSV 179
Query: 178 VVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTP 237
VVTLWYRAPE+LL + Y+T VD+WSVGCI AE+ +KPLF G+++VDQ+ KI +G P
Sbjct: 180 VVTLWYRAPEVLLQSS-YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLP 238
Query: 238 TETIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKR 297
E WP LP +Q ++ + P F + E G DLL + LT++P KR
Sbjct: 239 GEEDWPRDVALP-------RQAFH-SKSAQPIEKFVTD--IDELGKDLLLKCLTFNPAKR 288
Query: 298 ITVDDALNHYWFHEV 312
I+ AL+H +F ++
Sbjct: 289 ISAYSALSHPYFQDL 303
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 220 bits (560), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 123/315 (39%), Positives = 192/315 (60%), Gaps = 27/315 (8%)
Query: 7 CRSVFEFEKLNKISEGTYGIVYRARD-KKSGEIVALKKVKMNVGRKEDCLEYGFPISSLR 65
CR+ ++E + +I EG YG V++ARD K G VALK+V++ G E G P+S++R
Sbjct: 7 CRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTG------EEGMPLSTIR 60
Query: 66 EINILL---SFDHPSIVNVKEVVM----DDHDSVYMVMEYMEHDLKWLMESMKQP-FSTS 117
E+ +L +F+HP++V + +V D + +V E+++ DL ++ + +P T
Sbjct: 61 EVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTE 120
Query: 118 EVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSL 177
+K +M QLL G+ +LH + V+HRDLK N+L+ + G +K+ DFG++R Y + TS+
Sbjct: 121 TIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA-LTSV 179
Query: 178 VVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTP 237
VVTLWYRAPE+LL + Y+T VD+WSVGCI AE+ +KPLF G+++VDQ+ KI +G P
Sbjct: 180 VVTLWYRAPEVLLQSS-YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLP 238
Query: 238 TETIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKR 297
E WP LP +Q ++ + P F + E G DLL + LT++P KR
Sbjct: 239 GEEDWPRDVALP-------RQAFH-SKSAQPIEKFVTD--IDELGKDLLLKCLTFNPAKR 288
Query: 298 ITVDDALNHYWFHEV 312
I+ AL+H +F ++
Sbjct: 289 ISAYSALSHPYFQDL 303
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 219 bits (557), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 124/307 (40%), Positives = 179/307 (58%), Gaps = 26/307 (8%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILL- 71
+E + +I G YG VY+ARD SG VALK V++ G E G PIS++RE+ +L
Sbjct: 6 YEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNG------EEGLPISTVREVALLRR 59
Query: 72 --SFDHPSIVNVKEVVM----DDHDSVYMVMEYMEHDLKWLMESMKQPFSTSE-VKCLML 124
+F+HP++V + +V D V +V E+++ DL+ ++ P +E +K LM
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMR 119
Query: 125 QLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYR 184
Q L G+ +LH N ++HRDLK N+L+ + G +K+ DFG++R Y + +VVTLWYR
Sbjct: 120 QFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA-LAPVVVTLWYR 178
Query: 185 APELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPG 244
APE+LL + Y+T VDMWSVGCI AE+ +KPLF G +E DQ+ KIF +G P E WP
Sbjct: 179 APEVLLQST-YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPR 237
Query: 245 LSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDAL 304
LP + F R P + P + ESG LL +LT++P KRI+ AL
Sbjct: 238 DVSLP--RGAFP--------PRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRAL 287
Query: 305 NHYWFHE 311
H + H+
Sbjct: 288 QHSYLHK 294
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 219 bits (557), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 124/307 (40%), Positives = 180/307 (58%), Gaps = 26/307 (8%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILL- 71
+E + +I G YG VY+ARD SG VALK V++ G E G PIS++RE+ +L
Sbjct: 6 YEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNG------EEGLPISTVREVALLRR 59
Query: 72 --SFDHPSIVNVKEVVM----DDHDSVYMVMEYMEHDLKWLMESMKQPFSTSE-VKCLML 124
+F+HP++V + +V D V +V E+++ DL+ ++ P +E +K LM
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMR 119
Query: 125 QLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYR 184
Q L G+ +LH N ++HRDLK N+L+ + G +K+ DFG++R Y + + +VVTLWYR
Sbjct: 120 QFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALF-PVVVTLWYR 178
Query: 185 APELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPG 244
APE+LL + Y+T VDMWSVGCI AE+ +KPLF G +E DQ+ KIF +G P E WP
Sbjct: 179 APEVLLQST-YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPR 237
Query: 245 LSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDAL 304
LP + F R P + P + ESG LL +LT++P KRI+ AL
Sbjct: 238 DVSLP--RGAFP--------PRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRAL 287
Query: 305 NHYWFHE 311
H + H+
Sbjct: 288 QHSYLHK 294
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 219 bits (557), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 123/313 (39%), Positives = 190/313 (60%), Gaps = 27/313 (8%)
Query: 7 CRSVFEFEKLNKISEGTYGIVYRARD-KKSGEIVALKKVKMNVGRKEDCLEYGFPISSLR 65
CR+ ++E + +I EG YG V++ARD K G VALK+V++ G E G P+S++R
Sbjct: 7 CRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTG------EEGMPLSTIR 60
Query: 66 EINILL---SFDHPSIVNVKEVVM----DDHDSVYMVMEYMEHDLKWLMESMKQP-FSTS 117
E+ +L +F+HP++V + +V D + +V E+++ DL ++ + +P T
Sbjct: 61 EVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTE 120
Query: 118 EVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSL 177
+K +M QLL G+ +LH + V+HRDLK N+L+ + G +K+ DFG++R Y + TS+
Sbjct: 121 TIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA-LTSV 179
Query: 178 VVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTP 237
VVTLWYRAPE+LL + Y+T VD+WSVGCI AE+ +KPLF G+++VDQ+ KI +G P
Sbjct: 180 VVTLWYRAPEVLLQSS-YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLP 238
Query: 238 TETIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKR 297
E WP LP +Q ++ + P F + E G DLL + LT++P KR
Sbjct: 239 GEEDWPRDVALP-------RQAFH-SKSAQPIEKFVTD--IDELGKDLLLKCLTFNPAKR 288
Query: 298 ITVDDALNHYWFH 310
I+ AL+H +F
Sbjct: 289 ISAYSALSHPYFQ 301
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 218 bits (556), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 124/307 (40%), Positives = 179/307 (58%), Gaps = 26/307 (8%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILL- 71
+E + +I G YG VY+ARD SG VALK V++ G E G PIS++RE+ +L
Sbjct: 6 YEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNG------EEGLPISTVREVALLRR 59
Query: 72 --SFDHPSIVNVKEVVM----DDHDSVYMVMEYMEHDLKWLMESMKQPFSTSE-VKCLML 124
+F+HP++V + +V D V +V E+++ DL+ ++ P +E +K LM
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMR 119
Query: 125 QLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYR 184
Q L G+ +LH N ++HRDLK N+L+ + G +K+ DFG++R Y + +VVTLWYR
Sbjct: 120 QFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA-LDPVVVTLWYR 178
Query: 185 APELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPG 244
APE+LL + Y+T VDMWSVGCI AE+ +KPLF G +E DQ+ KIF +G P E WP
Sbjct: 179 APEVLLQST-YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPR 237
Query: 245 LSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDAL 304
LP + F R P + P + ESG LL +LT++P KRI+ AL
Sbjct: 238 DVSLP--RGAFP--------PRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRAL 287
Query: 305 NHYWFHE 311
H + H+
Sbjct: 288 QHSYLHK 294
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 215 bits (547), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 124/314 (39%), Positives = 180/314 (57%), Gaps = 23/314 (7%)
Query: 6 GCRSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLR 65
G + +E + +I G YG VY+ARD SG VALK V++ G PIS++R
Sbjct: 4 GSMATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVP---NGGGGGGGLPISTVR 60
Query: 66 EINILL---SFDHPSIVNVKEVVM----DDHDSVYMVMEYMEHDLKWLMESMKQPFSTSE 118
E+ +L +F+HP++V + +V D V +V E+++ DL+ ++ P +E
Sbjct: 61 EVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAE 120
Query: 119 -VKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSL 177
+K LM Q L G+ +LH N ++HRDLK N+L+ + G +K+ DFG++R Y + T +
Sbjct: 121 TIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA-LTPV 179
Query: 178 VVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTP 237
VVTLWYRAPE+LL + Y+T VDMWSVGCI AE+ +KPLF G +E DQ+ KIF +G P
Sbjct: 180 VVTLWYRAPEVLLQST-YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLP 238
Query: 238 TETIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKR 297
E WP LP + F R P + P + ESG LL +LT++P KR
Sbjct: 239 PEDDWPRDVSLP--RGAFP--------PRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKR 288
Query: 298 ITVDDALNHYWFHE 311
I+ AL H + H+
Sbjct: 289 ISAFRALQHSYLHK 302
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 198 bits (504), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 126/349 (36%), Positives = 191/349 (54%), Gaps = 57/349 (16%)
Query: 9 SVFEFEKLNKISEGTYGIVYRARDKKSGEIV--ALKKVKMNVGRKEDCLEYGFPISSLRE 66
+FE+E K+ GTYG VY+A+ K + ALK+++ G +S+ RE
Sbjct: 20 DLFEYEGC-KVGRGTYGHVYKAKRKDGKDDKDYALKQIEGT----------GISMSACRE 68
Query: 67 INILLSFDHPSIVNVKEVVMDDHD-SVYMVMEYMEHDLKWLME------SMKQPFSTSE- 118
I +L HP+++++++V + D V+++ +Y EHDL +++ + K+P
Sbjct: 69 IALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRG 128
Query: 119 -VKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQG----VLKICDFGMSRQYGSPLKP 173
VK L+ Q+L+G+ YLH NWVLHRDLK +N+L+ +G +KI D G +R + SPLKP
Sbjct: 129 MVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKP 188
Query: 174 YTSL---VVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTE------- 223
L VVT WYRAPELLLGA+ Y+ A+D+W++GCI AELL +P+F E
Sbjct: 189 LADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNP 248
Query: 224 --VDQIDKIFKTLGTPTETIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVL--- 278
DQ+D+IF +G P + W + ++P ++ L K F ++T ++
Sbjct: 249 YHHDQLDRIFNVMGFPADKDWEDIKKMP---------EHSTLMKDFRRNTYTNCSLIKYM 299
Query: 279 -------SESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVPLPKSKDF 320
F LL +LLT DP KRIT + A+ +F E PLP S F
Sbjct: 300 EKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYFLEDPLPTSDVF 348
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 189 bits (480), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 115/307 (37%), Positives = 173/307 (56%), Gaps = 24/307 (7%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
+ +L I EG YG+V A D VA+KK+ + C +LREI ILL
Sbjct: 45 YTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKIS-PFEHQTYCQR------TLREIQILLR 97
Query: 73 FDHPSIVNVKEVV----MDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLE 128
F H +++ +++++ ++ VY+V + ME DL L++S Q S + + Q+L
Sbjct: 98 FRHENVIGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKS--QQLSNDHICYFLYQILR 155
Query: 129 GVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSL----VVTLWYR 184
G+KY+H VLHRDLK SNLL+N LKICDFG++R P +T V T WYR
Sbjct: 156 GLKYIHSANVLHRDLKPSNLLINTTCDLKICDFGLAR-IADPEHDHTGFLTEXVATRWYR 214
Query: 185 APELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPG 244
APE++L +K Y+ ++D+WSVGCI+AE+L+ +P+F G +DQ++ I LG+P++
Sbjct: 215 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE---D 271
Query: 245 LSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDAL 304
L+ + KA Q K A F P DLL+R+LT++P KRITV++AL
Sbjct: 272 LNCIINMKARNYLQSLPSKTKVAWAKLF---PKSDSKALDLLDRMLTFNPNKRITVEEAL 328
Query: 305 NHYWFHE 311
H + +
Sbjct: 329 AHPYLEQ 335
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 188 bits (477), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 116/323 (35%), Positives = 170/323 (52%), Gaps = 23/323 (7%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILL 71
E+E + I G YG+V AR + +G+ VA+KK+ + +LRE+ IL
Sbjct: 55 EYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKR------TLRELKILK 108
Query: 72 SFDHPSIVNVKEVVM-----DDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQL 126
F H +I+ +K+++ + SVY+V++ ME DL ++ S QP + V+ + QL
Sbjct: 109 HFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHS-SQPLTLEHVRYFLYQL 167
Query: 127 LEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPY----TSLVVTLW 182
L G+KY+H V+HRDLK SNLL+N LKI DFGM+R + + T V T W
Sbjct: 168 LRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRW 227
Query: 183 YRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIW 242
YRAPEL+L +Y+ A+D+WSVGCI E+LA++ LF G V Q+ I LGTP+
Sbjct: 228 YRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPS---- 283
Query: 243 PGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDD 302
P + + GA+ + L R P T P LL R+L ++P RI+
Sbjct: 284 PAVIQAVGAER--VRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAA 341
Query: 303 ALNHYWFHEVPLPKSK-DFMPTF 324
AL H + + P + D P F
Sbjct: 342 ALRHPFLAKYHDPDDEPDCAPPF 364
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 187 bits (476), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 114/323 (35%), Positives = 167/323 (51%), Gaps = 23/323 (7%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILL 71
E+E + I G YG+V AR + +G+ VA+KK+ + +LRE+ IL
Sbjct: 56 EYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKR------TLRELKILK 109
Query: 72 SFDHPSIVNVKEVVM-----DDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQL 126
F H +I+ +K+++ + SVY+V++ ME DL ++ S QP + V+ + QL
Sbjct: 110 HFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHS-SQPLTLEHVRYFLYQL 168
Query: 127 LEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPY----TSLVVTLW 182
L G+KY+H V+HRDLK SNLL+N LKI DFGM+R + + T V T W
Sbjct: 169 LRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRW 228
Query: 183 YRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIW 242
YRAPEL+L +Y+ A+D+WSVGCI E+LA++ LF G V Q+ I LGTP+ +
Sbjct: 229 YRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAV- 287
Query: 243 PGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDD 302
+ A + L R P T P LL R+L ++P RI+
Sbjct: 288 -----IQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAA 342
Query: 303 ALNHYWFHEVPLPKSK-DFMPTF 324
AL H + + P + D P F
Sbjct: 343 ALRHPFLAKYHDPDDEPDCAPPF 365
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 186 bits (473), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 114/307 (37%), Positives = 171/307 (55%), Gaps = 34/307 (11%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
+ L+ I EG YG+V A D + VA+KK+ + C +LREI ILL+
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS-PFEHQTYCQR------TLREIKILLA 79
Query: 73 FDHPSIVNVKEVV----MDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLE 128
F H +I+ + +++ ++ VY+V + ME DL L+++ Q S + + Q+L
Sbjct: 80 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT--QHLSNDHICYFLYQILR 137
Query: 129 GVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSL----VVTLWYR 184
G+KY+H VLHRDLK SNLLLN LKICDFG++R P +T V T WYR
Sbjct: 138 GLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEYVATRWYR 196
Query: 185 APELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPG 244
APE++L +K Y+ ++D+WSVGCI+AE+L+ +P+F G +DQ++ I LG+P++
Sbjct: 197 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNC 256
Query: 245 LSELPGAKANFA-----KQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRIT 299
+ L + K P+N L FP A DLL+++LT++P KRI
Sbjct: 257 IINLKARNYLLSLPHKNKVPWNRL---FPNA--------DSKALDLLDKMLTFNPHKRIE 305
Query: 300 VDDALNH 306
V+ AL H
Sbjct: 306 VEQALAH 312
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 186 bits (473), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 114/312 (36%), Positives = 172/312 (55%), Gaps = 34/312 (10%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
+ L+ I EG YG+V A D + VA+KK+ + C +LREI ILL
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS-PFEHQTYCQR------TLREIKILLR 77
Query: 73 FDHPSIVNVKEVV----MDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLE 128
F H +I+ + +++ ++ VY+V + ME DL L+++ Q S + + Q+L
Sbjct: 78 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT--QHLSNDHICYFLYQILR 135
Query: 129 GVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSL----VVTLWYR 184
G+KY+H VLHRDLK SNLLLN LKICDFG++R P +T V T WYR
Sbjct: 136 GLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLAR-VADPDHDHTGFLTEYVATRWYR 194
Query: 185 APELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPG 244
APE++L +K Y+ ++D+WSVGCI+AE+L+ +P+F G +DQ++ I LG+P++
Sbjct: 195 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNX 254
Query: 245 LSELPGAKANFA-----KQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRIT 299
+ L + K P+N L FP A DLL+++LT++P KRI
Sbjct: 255 IINLKARNYLLSLPHKNKVPWNRL---FPNA--------DSKALDLLDKMLTFNPHKRIE 303
Query: 300 VDDALNHYWFHE 311
V+ AL H + +
Sbjct: 304 VEQALAHPYLEQ 315
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 186 bits (472), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 117/311 (37%), Positives = 174/311 (55%), Gaps = 42/311 (13%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
+ L+ I EG YG+V A D + VA+KK+ + C +LREI ILL+
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS-PFEHQTYCQR------TLREIKILLA 79
Query: 73 FDHPSIVNVKEVV----MDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLE 128
F H +I+ + +++ ++ VY+V + ME DL L+++ Q S + + Q+L
Sbjct: 80 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT--QHLSNDHICYFLYQILR 137
Query: 129 GVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSL----VVTLWYR 184
G+KY+H VLHRDLK SNLLLN LKICDFG++R P +T V T WYR
Sbjct: 138 GLKYIHSANVLHRDLKPSNLLLNTTSDLKICDFGLAR-VADPDHDHTGFLTEYVATRWYR 196
Query: 185 APELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPT-ETIWP 243
APE++L +K Y+ ++D+WSVGCI+AE+L+ +P+F G +DQ++ I LG+P+ E +
Sbjct: 197 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNC 256
Query: 244 GLS--------ELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPE 295
G++ LP K P+N L FP A DLL+++LT++P
Sbjct: 257 GINLKARNYLLSLPHKN----KVPWNRL---FPNA--------DSKALDLLDKMLTFNPH 301
Query: 296 KRITVDDALNH 306
KRI V+ AL H
Sbjct: 302 KRIEVEQALAH 312
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 186 bits (472), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 114/312 (36%), Positives = 172/312 (55%), Gaps = 34/312 (10%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
+ L+ I EG YG+V A D + VA+KK+ + C +LREI ILL
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS-PFEHQTYCQR------TLREIKILLR 79
Query: 73 FDHPSIVNVKEVV----MDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLE 128
F H +I+ + +++ ++ VY+V + ME DL L+++ Q S + + Q+L
Sbjct: 80 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT--QHLSNDHICYFLYQILR 137
Query: 129 GVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSL----VVTLWYR 184
G+KY+H VLHRDLK SNLLLN LKICDFG++R P +T V T WYR
Sbjct: 138 GLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEYVATRWYR 196
Query: 185 APELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPG 244
APE++L +K Y+ ++D+WSVGCI+AE+L+ +P+F G +DQ++ I LG+P++
Sbjct: 197 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNC 256
Query: 245 LSELPGAKANFA-----KQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRIT 299
+ L + K P+N L FP A DLL+++LT++P KRI
Sbjct: 257 IINLKARNYLLSLPHKNKVPWNRL---FPNA--------DSKALDLLDKMLTFNPHKRIE 305
Query: 300 VDDALNHYWFHE 311
V+ AL H + +
Sbjct: 306 VEQALAHPYLEQ 317
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 186 bits (472), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 114/312 (36%), Positives = 172/312 (55%), Gaps = 34/312 (10%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
+ L+ I EG YG+V A D + VA+KK+ + C +LREI ILL
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS-PFEHQTYCQR------TLREIKILLR 77
Query: 73 FDHPSIVNVKEVV----MDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLE 128
F H +I+ + +++ ++ VY+V + ME DL L+++ Q S + + Q+L
Sbjct: 78 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT--QHLSNDHICYFLYQILR 135
Query: 129 GVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSL----VVTLWYR 184
G+KY+H VLHRDLK SNLLLN LKICDFG++R P +T V T WYR
Sbjct: 136 GLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLAR-VADPDHDHTGFLTEYVATRWYR 194
Query: 185 APELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPG 244
APE++L +K Y+ ++D+WSVGCI+AE+L+ +P+F G +DQ++ I LG+P++
Sbjct: 195 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNC 254
Query: 245 LSELPGAKANFA-----KQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRIT 299
+ L + K P+N L FP A DLL+++LT++P KRI
Sbjct: 255 IINLKARNYLLSLPHKNKVPWNRL---FPNA--------DSKALDLLDKMLTFNPHKRIE 303
Query: 300 VDDALNHYWFHE 311
V+ AL H + +
Sbjct: 304 VEQALAHPYLEQ 315
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 186 bits (472), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 114/312 (36%), Positives = 172/312 (55%), Gaps = 34/312 (10%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
+ L+ I EG YG+V A D + VA+KK+ + C +LREI ILL
Sbjct: 45 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS-PFEHQTYCQR------TLREIKILLR 97
Query: 73 FDHPSIVNVKEVV----MDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLE 128
F H +I+ + +++ ++ VY+V + ME DL L+++ Q S + + Q+L
Sbjct: 98 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT--QHLSNDHICYFLYQILR 155
Query: 129 GVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSL----VVTLWYR 184
G+KY+H VLHRDLK SNLLLN LKICDFG++R P +T V T WYR
Sbjct: 156 GLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEYVATRWYR 214
Query: 185 APELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPG 244
APE++L +K Y+ ++D+WSVGCI+AE+L+ +P+F G +DQ++ I LG+P++
Sbjct: 215 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNC 274
Query: 245 LSELPGAKANFA-----KQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRIT 299
+ L + K P+N L FP A DLL+++LT++P KRI
Sbjct: 275 IINLKARNYLLSLPHKNKVPWNRL---FPNA--------DSKALDLLDKMLTFNPHKRIE 323
Query: 300 VDDALNHYWFHE 311
V+ AL H + +
Sbjct: 324 VEQALAHPYLEQ 335
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 186 bits (472), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 114/312 (36%), Positives = 172/312 (55%), Gaps = 34/312 (10%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
+ L+ I EG YG+V A D + VA+KK+ + C +LREI ILL
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS-PFEHQTYCQR------TLREIKILLR 77
Query: 73 FDHPSIVNVKEVV----MDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLE 128
F H +I+ + +++ ++ VY+V + ME DL L+++ Q S + + Q+L
Sbjct: 78 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT--QHLSNDHICYFLYQILR 135
Query: 129 GVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSL----VVTLWYR 184
G+KY+H VLHRDLK SNLLLN LKICDFG++R P +T V T WYR
Sbjct: 136 GLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEYVATRWYR 194
Query: 185 APELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPG 244
APE++L +K Y+ ++D+WSVGCI+AE+L+ +P+F G +DQ++ I LG+P++
Sbjct: 195 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNC 254
Query: 245 LSELPGAKANFA-----KQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRIT 299
+ L + K P+N L FP A DLL+++LT++P KRI
Sbjct: 255 IINLKARNYLLSLPHKNKVPWNRL---FPNA--------DSKALDLLDKMLTFNPHKRIE 303
Query: 300 VDDALNHYWFHE 311
V+ AL H + +
Sbjct: 304 VEQALAHPYLEQ 315
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 186 bits (472), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 112/312 (35%), Positives = 171/312 (54%), Gaps = 34/312 (10%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
+ L+ I EG YG+V A D L KV++ + + + +LREI ILL
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDN-------LNKVRVAIKKISPFEHQTYXQRTLREIKILLR 81
Query: 73 FDHPSIVNVKEVV----MDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLE 128
F H +I+ + +++ ++ VY+V + ME DL L+++ Q S + + Q+L
Sbjct: 82 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT--QHLSNDHICYFLYQILR 139
Query: 129 GVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSL----VVTLWYR 184
G+KY+H VLHRDLK SNLLLN LKICDFG++R P +T V T WYR
Sbjct: 140 GLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLAR-VADPDHDHTGFLTEYVATRWYR 198
Query: 185 APELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPG 244
APE++L +K Y+ ++D+WSVGCI+AE+L+ +P+F G +DQ++ I LG+P++
Sbjct: 199 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNC 258
Query: 245 LSELPGAKANFA-----KQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRIT 299
+ L + K P+N L FP A DLL+++LT++P KRI
Sbjct: 259 IINLKARNYLLSLPHKNKVPWNRL---FPNA--------DSKALDLLDKMLTFNPHKRIE 307
Query: 300 VDDALNHYWFHE 311
V+ AL H + +
Sbjct: 308 VEQALAHPYLEQ 319
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 186 bits (472), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 114/312 (36%), Positives = 172/312 (55%), Gaps = 34/312 (10%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
+ L+ I EG YG+V A D + VA+KK+ + C +LREI ILL
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS-PFEHQTYCQR------TLREIKILLR 81
Query: 73 FDHPSIVNVKEVV----MDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLE 128
F H +I+ + +++ ++ VY+V + ME DL L+++ Q S + + Q+L
Sbjct: 82 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT--QHLSNDHICYFLYQILR 139
Query: 129 GVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSL----VVTLWYR 184
G+KY+H VLHRDLK SNLLLN LKICDFG++R P +T V T WYR
Sbjct: 140 GLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLXEXVATRWYR 198
Query: 185 APELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPG 244
APE++L +K Y+ ++D+WSVGCI+AE+L+ +P+F G +DQ++ I LG+P++
Sbjct: 199 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNC 258
Query: 245 LSELPGAKANFA-----KQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRIT 299
+ L + K P+N L FP A DLL+++LT++P KRI
Sbjct: 259 IINLKARNYLLSLPHKNKVPWNRL---FPNA--------DSKALDLLDKMLTFNPHKRIE 307
Query: 300 VDDALNHYWFHE 311
V+ AL H + +
Sbjct: 308 VEQALAHPYLEQ 319
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 186 bits (472), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 114/312 (36%), Positives = 172/312 (55%), Gaps = 34/312 (10%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
+ L+ I EG YG+V A D + VA+KK+ + C +LREI ILL
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS-PFEHQTYCQR------TLREIKILLR 82
Query: 73 FDHPSIVNVKEVV----MDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLE 128
F H +I+ + +++ ++ VY+V + ME DL L+++ Q S + + Q+L
Sbjct: 83 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT--QHLSNDHICYFLYQILR 140
Query: 129 GVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSL----VVTLWYR 184
G+KY+H VLHRDLK SNLLLN LKICDFG++R P +T V T WYR
Sbjct: 141 GLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLXEXVATRWYR 199
Query: 185 APELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPG 244
APE++L +K Y+ ++D+WSVGCI+AE+L+ +P+F G +DQ++ I LG+P++
Sbjct: 200 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNC 259
Query: 245 LSELPGAKANFA-----KQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRIT 299
+ L + K P+N L FP A DLL+++LT++P KRI
Sbjct: 260 IINLKARNYLLSLPHKNKVPWNRL---FPNA--------DSKALDLLDKMLTFNPHKRIE 308
Query: 300 VDDALNHYWFHE 311
V+ AL H + +
Sbjct: 309 VEQALAHPYLEQ 320
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 186 bits (472), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 114/312 (36%), Positives = 172/312 (55%), Gaps = 34/312 (10%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
+ L+ I EG YG+V A D + VA+KK+ + C +LREI ILL
Sbjct: 33 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS-PFEHQTYCQR------TLREIKILLR 85
Query: 73 FDHPSIVNVKEVV----MDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLE 128
F H +I+ + +++ ++ VY+V + ME DL L+++ Q S + + Q+L
Sbjct: 86 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT--QHLSNDHICYFLYQILR 143
Query: 129 GVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSL----VVTLWYR 184
G+KY+H VLHRDLK SNLLLN LKICDFG++R P +T V T WYR
Sbjct: 144 GLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEYVATRWYR 202
Query: 185 APELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPG 244
APE++L +K Y+ ++D+WSVGCI+AE+L+ +P+F G +DQ++ I LG+P++
Sbjct: 203 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNC 262
Query: 245 LSELPGAKANFA-----KQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRIT 299
+ L + K P+N L FP A DLL+++LT++P KRI
Sbjct: 263 IINLKARNYLLSLPHKNKVPWNRL---FPNA--------DSKALDLLDKMLTFNPHKRIE 311
Query: 300 VDDALNHYWFHE 311
V+ AL H + +
Sbjct: 312 VEQALAHPYLEQ 323
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 186 bits (472), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 114/312 (36%), Positives = 172/312 (55%), Gaps = 34/312 (10%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
+ L+ I EG YG+V A D + VA+KK+ + C +LREI ILL
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS-PFEHQTYCQR------TLREIKILLR 77
Query: 73 FDHPSIVNVKEVV----MDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLE 128
F H +I+ + +++ ++ VY+V + ME DL L+++ Q S + + Q+L
Sbjct: 78 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT--QHLSNDHICYFLYQILR 135
Query: 129 GVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSL----VVTLWYR 184
G+KY+H VLHRDLK SNLLLN LKICDFG++R P +T V T WYR
Sbjct: 136 GLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEYVATRWYR 194
Query: 185 APELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPG 244
APE++L +K Y+ ++D+WSVGCI+AE+L+ +P+F G +DQ++ I LG+P++
Sbjct: 195 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNC 254
Query: 245 LSELPGAKANFA-----KQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRIT 299
+ L + K P+N L FP A DLL+++LT++P KRI
Sbjct: 255 IINLKARNYLLSLPHKNKVPWNRL---FPNA--------DSKALDLLDKMLTFNPHKRIE 303
Query: 300 VDDALNHYWFHE 311
V+ AL H + +
Sbjct: 304 VEQALAHPYLEQ 315
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 186 bits (471), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 114/312 (36%), Positives = 172/312 (55%), Gaps = 34/312 (10%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
+ L+ I EG YG+V A D + VA+KK+ + C +LREI ILL
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS-PFEHQTYCQR------TLREIKILLR 75
Query: 73 FDHPSIVNVKEVV----MDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLE 128
F H +I+ + +++ ++ VY+V + ME DL L+++ Q S + + Q+L
Sbjct: 76 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT--QHLSNDHICYFLYQILR 133
Query: 129 GVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSL----VVTLWYR 184
G+KY+H VLHRDLK SNLLLN LKICDFG++R P +T V T WYR
Sbjct: 134 GLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEYVATRWYR 192
Query: 185 APELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPG 244
APE++L +K Y+ ++D+WSVGCI+AE+L+ +P+F G +DQ++ I LG+P++
Sbjct: 193 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNC 252
Query: 245 LSELPGAKANFA-----KQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRIT 299
+ L + K P+N L FP A DLL+++LT++P KRI
Sbjct: 253 IINLKARNYLLSLPHKNKVPWNRL---FPNA--------DSKALDLLDKMLTFNPHKRIE 301
Query: 300 VDDALNHYWFHE 311
V+ AL H + +
Sbjct: 302 VEQALAHPYLEQ 313
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 186 bits (471), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 114/312 (36%), Positives = 172/312 (55%), Gaps = 34/312 (10%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
+ L+ I EG YG+V A D + VA+KK+ + C +LREI ILL
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS-PFEHQTYCQR------TLREIKILLR 81
Query: 73 FDHPSIVNVKEVV----MDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLE 128
F H +I+ + +++ ++ VY+V + ME DL L+++ Q S + + Q+L
Sbjct: 82 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT--QHLSNDHICYFLYQILR 139
Query: 129 GVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSL----VVTLWYR 184
G+KY+H VLHRDLK SNLLLN LKICDFG++R P +T V T WYR
Sbjct: 140 GLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLAR-VADPDHDHTGFLTEYVATRWYR 198
Query: 185 APELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPG 244
APE++L +K Y+ ++D+WSVGCI+AE+L+ +P+F G +DQ++ I LG+P++
Sbjct: 199 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNC 258
Query: 245 LSELPGAKANFA-----KQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRIT 299
+ L + K P+N L FP A DLL+++LT++P KRI
Sbjct: 259 IINLKARNYLLSLPHKNKVPWNRL---FPNA--------DSKALDLLDKMLTFNPHKRIE 307
Query: 300 VDDALNHYWFHE 311
V+ AL H + +
Sbjct: 308 VEQALAHPYLEQ 319
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 186 bits (471), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 114/312 (36%), Positives = 172/312 (55%), Gaps = 34/312 (10%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
+ L+ I EG YG+V A D + VA+KK+ + C +LREI ILL
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS-PFEHQTYCQR------TLREIKILLR 82
Query: 73 FDHPSIVNVKEVV----MDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLE 128
F H +I+ + +++ ++ VY+V + ME DL L+++ Q S + + Q+L
Sbjct: 83 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT--QHLSNDHICYFLYQILR 140
Query: 129 GVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSL----VVTLWYR 184
G+KY+H VLHRDLK SNLLLN LKICDFG++R P +T V T WYR
Sbjct: 141 GLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEYVATRWYR 199
Query: 185 APELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPG 244
APE++L +K Y+ ++D+WSVGCI+AE+L+ +P+F G +DQ++ I LG+P++
Sbjct: 200 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNC 259
Query: 245 LSELPGAKANFA-----KQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRIT 299
+ L + K P+N L FP A DLL+++LT++P KRI
Sbjct: 260 IINLKARNYLLSLPHKNKVPWNRL---FPNA--------DSKALDLLDKMLTFNPHKRIE 308
Query: 300 VDDALNHYWFHE 311
V+ AL H + +
Sbjct: 309 VEQALAHPYLEQ 320
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 186 bits (471), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 114/312 (36%), Positives = 172/312 (55%), Gaps = 34/312 (10%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
+ L+ I EG YG+V A D + VA+KK+ + C +LREI ILL
Sbjct: 31 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS-PFEHQTYCQR------TLREIKILLR 83
Query: 73 FDHPSIVNVKEVV----MDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLE 128
F H +I+ + +++ ++ VY+V + ME DL L+++ Q S + + Q+L
Sbjct: 84 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT--QHLSNDHICYFLYQILR 141
Query: 129 GVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSL----VVTLWYR 184
G+KY+H VLHRDLK SNLLLN LKICDFG++R P +T V T WYR
Sbjct: 142 GLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEYVATRWYR 200
Query: 185 APELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPG 244
APE++L +K Y+ ++D+WSVGCI+AE+L+ +P+F G +DQ++ I LG+P++
Sbjct: 201 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNC 260
Query: 245 LSELPGAKANFA-----KQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRIT 299
+ L + K P+N L FP A DLL+++LT++P KRI
Sbjct: 261 IINLKARNYLLSLPHKNKVPWNRL---FPNA--------DSKALDLLDKMLTFNPHKRIE 309
Query: 300 VDDALNHYWFHE 311
V+ AL H + +
Sbjct: 310 VEQALAHPYLEQ 321
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 186 bits (471), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 114/312 (36%), Positives = 172/312 (55%), Gaps = 34/312 (10%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
+ L+ I EG YG+V A D + VA+KK+ + C +LREI ILL
Sbjct: 22 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS-PFEHQTYCQR------TLREIKILLR 74
Query: 73 FDHPSIVNVKEVV----MDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLE 128
F H +I+ + +++ ++ VY+V + ME DL L+++ Q S + + Q+L
Sbjct: 75 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT--QHLSNDHICYFLYQILR 132
Query: 129 GVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSL----VVTLWYR 184
G+KY+H VLHRDLK SNLLLN LKICDFG++R P +T V T WYR
Sbjct: 133 GLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEYVATRWYR 191
Query: 185 APELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPG 244
APE++L +K Y+ ++D+WSVGCI+AE+L+ +P+F G +DQ++ I LG+P++
Sbjct: 192 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNC 251
Query: 245 LSELPGAKANFA-----KQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRIT 299
+ L + K P+N L FP A DLL+++LT++P KRI
Sbjct: 252 IINLKARNYLLSLPHKNKVPWNRL---FPNA--------DSKALDLLDKMLTFNPHKRIE 300
Query: 300 VDDALNHYWFHE 311
V+ AL H + +
Sbjct: 301 VEQALAHPYLEQ 312
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 186 bits (471), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 114/312 (36%), Positives = 172/312 (55%), Gaps = 34/312 (10%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
+ L+ I EG YG+V A D + VA+KK+ + C +LREI ILL
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS-PFEHQTYCQR------TLREIKILLR 81
Query: 73 FDHPSIVNVKEVV----MDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLE 128
F H +I+ + +++ ++ VY+V + ME DL L+++ Q S + + Q+L
Sbjct: 82 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT--QHLSNDHICYFLYQILR 139
Query: 129 GVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSL----VVTLWYR 184
G+KY+H VLHRDLK SNLLLN LKICDFG++R P +T V T WYR
Sbjct: 140 GLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEYVATRWYR 198
Query: 185 APELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPG 244
APE++L +K Y+ ++D+WSVGCI+AE+L+ +P+F G +DQ++ I LG+P++
Sbjct: 199 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNC 258
Query: 245 LSELPGAKANFA-----KQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRIT 299
+ L + K P+N L FP A DLL+++LT++P KRI
Sbjct: 259 IINLKARNYLLSLPHKNKVPWNRL---FPNA--------DSKALDLLDKMLTFNPHKRIE 307
Query: 300 VDDALNHYWFHE 311
V+ AL H + +
Sbjct: 308 VEQALAHPYLEQ 319
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 186 bits (471), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 112/312 (35%), Positives = 171/312 (54%), Gaps = 34/312 (10%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
+ L+ I EG YG+V A D L KV++ + + + +LREI ILL
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDN-------LNKVRVAIRKISPFEHQTYCQRTLREIKILLR 81
Query: 73 FDHPSIVNVKEVV----MDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLE 128
F H +I+ + +++ ++ VY+V + ME DL L+++ Q S + + Q+L
Sbjct: 82 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT--QHLSNDHICYFLYQILR 139
Query: 129 GVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSL----VVTLWYR 184
G+KY+H VLHRDLK SNLLLN LKICDFG++R P +T V T WYR
Sbjct: 140 GLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEYVATRWYR 198
Query: 185 APELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPG 244
APE++L +K Y+ ++D+WSVGCI+AE+L+ +P+F G +DQ++ I LG+P++
Sbjct: 199 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNC 258
Query: 245 LSELPGAKANFA-----KQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRIT 299
+ L + K P+N L FP A DLL+++LT++P KRI
Sbjct: 259 IINLKARNYLLSLPHKNKVPWNRL---FPNA--------DSKALDLLDKMLTFNPHKRIE 307
Query: 300 VDDALNHYWFHE 311
V+ AL H + +
Sbjct: 308 VEQALAHPYLEQ 319
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 185 bits (470), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 114/312 (36%), Positives = 171/312 (54%), Gaps = 34/312 (10%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
+ L+ I EG YG+V A D + VA+KK+ + C +LREI ILL
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS-PFEHQTYCQR------TLREIKILLR 81
Query: 73 FDHPSIVNVKEVV----MDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLE 128
F H +I+ + +++ ++ VY+V + ME DL L++ Q S + + Q+L
Sbjct: 82 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKC--QHLSNDHICYFLYQILR 139
Query: 129 GVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSL----VVTLWYR 184
G+KY+H VLHRDLK SNLLLN LKICDFG++R P +T V T WYR
Sbjct: 140 GLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEYVATRWYR 198
Query: 185 APELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPG 244
APE++L +K Y+ ++D+WSVGCI+AE+L+ +P+F G +DQ++ I LG+P++
Sbjct: 199 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNC 258
Query: 245 LSELPGAKANFA-----KQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRIT 299
+ L + K P+N L FP A DLL+++LT++P KRI
Sbjct: 259 IINLKARNYLLSLPHKNKVPWNRL---FPNA--------DSKALDLLDKMLTFNPHKRIE 307
Query: 300 VDDALNHYWFHE 311
V+ AL H + +
Sbjct: 308 VEQALAHPYLEQ 319
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 185 bits (470), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 117/330 (35%), Positives = 170/330 (51%), Gaps = 30/330 (9%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILL 71
+F+ + + EG YG+V A K +GEIVA+KK+ E + F + +LREI IL
Sbjct: 12 DFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKI-------EPFDKPLFALRTLREIKILK 64
Query: 72 SFDHPSIVNVKEVVMDDH----DSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLL 127
F H +I+ + + D + VY++ E M+ DL ++ + Q S ++ + Q L
Sbjct: 65 HFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVIST--QMLSDDHIQYFIYQTL 122
Query: 128 EGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSR----------QYGSPLKPYTSL 177
VK LH + V+HRDLK SNLL+N+ LK+CDFG++R + T
Sbjct: 123 RAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEX 182
Query: 178 VVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTP 237
V T WYRAPE++L + KYS A+D+WS GCI+AEL ++P+F G Q+ IF +GTP
Sbjct: 183 VATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTP 242
Query: 238 TETIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGS-PVLSESGFDLLNRLLTYDPEK 296
E P A+ P +PAA P ++ G DLL R+L +DP K
Sbjct: 243 HSDNDLRCIESPRAREYIKSLPM------YPAAPLEKMFPRVNPKGIDLLQRMLVFDPAK 296
Query: 297 RITVDDALNHYWFHEVPLPKSKDFMPTFPP 326
RIT +AL H + P + PP
Sbjct: 297 RITAKEALEHPYLQTYHDPNDEPEGEPIPP 326
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 185 bits (470), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 117/330 (35%), Positives = 170/330 (51%), Gaps = 30/330 (9%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILL 71
+F+ + + EG YG+V A K +GEIVA+KK+ E + F + +LREI IL
Sbjct: 12 DFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKI-------EPFDKPLFALRTLREIKILK 64
Query: 72 SFDHPSIVNVKEVVMDDH----DSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLL 127
F H +I+ + + D + VY++ E M+ DL ++ + Q S ++ + Q L
Sbjct: 65 HFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVIST--QMLSDDHIQYFIYQTL 122
Query: 128 EGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSR----------QYGSPLKPYTSL 177
VK LH + V+HRDLK SNLL+N+ LK+CDFG++R + T
Sbjct: 123 RAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEY 182
Query: 178 VVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTP 237
V T WYRAPE++L + KYS A+D+WS GCI+AEL ++P+F G Q+ IF +GTP
Sbjct: 183 VATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTP 242
Query: 238 TETIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGS-PVLSESGFDLLNRLLTYDPEK 296
E P A+ P +PAA P ++ G DLL R+L +DP K
Sbjct: 243 HSDNDLRCIESPRAREYIKSLPM------YPAAPLEKMFPRVNPKGIDLLQRMLVFDPAK 296
Query: 297 RITVDDALNHYWFHEVPLPKSKDFMPTFPP 326
RIT +AL H + P + PP
Sbjct: 297 RITAKEALEHPYLQTYHDPNDEPEGEPIPP 326
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 185 bits (469), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 114/312 (36%), Positives = 171/312 (54%), Gaps = 34/312 (10%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
+ L+ I EG YG+V A D + VA+KK+ + C +LREI ILL
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS-PFEHQTYCQR------TLREIKILLR 75
Query: 73 FDHPSIVNVKEVV----MDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLE 128
F H +I+ + +++ ++ VY+V + ME DL L+++ Q S + + Q+L
Sbjct: 76 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT--QHLSNDHICYFLYQILR 133
Query: 129 GVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSL----VVTLWYR 184
G+KY+H VLHRDLK SNLLLN LKICDFG++R P +T V T WYR
Sbjct: 134 GLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEYVATRWYR 192
Query: 185 APELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPG 244
APE++L +K Y+ ++D+WSVGCI+AE+L+ +P+F G +DQ++ I LG+P +
Sbjct: 193 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPEQEDLNC 252
Query: 245 LSELPGAKANFA-----KQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRIT 299
+ L + K P+N L FP A DLL+++LT++P KRI
Sbjct: 253 IINLKARNYLLSLPHKNKVPWNRL---FPNA--------DSKALDLLDKMLTFNPHKRIE 301
Query: 300 VDDALNHYWFHE 311
V+ AL H + +
Sbjct: 302 VEQALAHPYLEQ 313
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 184 bits (468), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 117/330 (35%), Positives = 171/330 (51%), Gaps = 30/330 (9%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILL 71
+F+ + + EG YG+V A K +GEIVA+KK+ E + F + +LREI IL
Sbjct: 12 DFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKI-------EPFDKPLFALRTLREIKILK 64
Query: 72 SFDHPSIVNVKEVVMDDH----DSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLL 127
F H +I+ + + D + VY++ E M+ DL ++ + Q S ++ + Q L
Sbjct: 65 HFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVIST--QMLSDDHIQYFIYQTL 122
Query: 128 EGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSR-------QYGSPLKPYTSLV-- 178
VK LH + V+HRDLK SNLL+N+ LK+CDFG++R P + +V
Sbjct: 123 RAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEF 182
Query: 179 -VTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTP 237
T WYRAPE++L + KYS A+D+WS GCI+AEL ++P+F G Q+ IF +GTP
Sbjct: 183 VATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTP 242
Query: 238 TETIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGS-PVLSESGFDLLNRLLTYDPEK 296
E P A+ P +PAA P ++ G DLL R+L +DP K
Sbjct: 243 HSDNDLRCIESPRAREYIKSLPM------YPAAPLEKMFPRVNPKGIDLLQRMLVFDPAK 296
Query: 297 RITVDDALNHYWFHEVPLPKSKDFMPTFPP 326
RIT +AL H + P + PP
Sbjct: 297 RITAKEALEHPYLQTYHDPNDEPEGEPIPP 326
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 183 bits (465), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 113/313 (36%), Positives = 170/313 (54%), Gaps = 34/313 (10%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILL 71
+ L+ I EG YG+V A D + VA+KK+ + C +LREI ILL
Sbjct: 44 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS-PFEHQTYCQR------TLREIKILL 96
Query: 72 SFDHPSIVNVKEVV----MDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLL 127
F H +I+ + +++ ++ VY+V M DL L+++ Q S + + Q+L
Sbjct: 97 RFRHENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKT--QHLSNDHICYFLYQIL 154
Query: 128 EGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSL----VVTLWY 183
G+KY+H VLHRDLK SNLLLN LKICDFG++R P +T V T WY
Sbjct: 155 RGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLAR-VADPDHDHTGFLTEYVATRWY 213
Query: 184 RAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWP 243
RAPE++L +K Y+ ++D+WSVGCI+AE+L+ +P+F G +DQ++ I LG+P++
Sbjct: 214 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLN 273
Query: 244 GLSELPGAKANFA-----KQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRI 298
+ L + K P+N L FP A DLL+++LT++P KRI
Sbjct: 274 CIINLKARNYLLSLPHKNKVPWNRL---FPNA--------DSKALDLLDKMLTFNPHKRI 322
Query: 299 TVDDALNHYWFHE 311
V+ AL H + +
Sbjct: 323 EVEQALAHPYLEQ 335
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 182 bits (462), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 113/312 (36%), Positives = 171/312 (54%), Gaps = 34/312 (10%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
+ L+ I EG YG+V A D + VA+KK+ + C +LREI ILL
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS-PFEHQTYCQR------TLREIKILLR 77
Query: 73 FDHPSIVNVKEVV----MDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLE 128
F H +I+ + +++ ++ VY+V + ME DL L+++ Q S + + Q+L
Sbjct: 78 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT--QHLSNDHICYFLYQILR 135
Query: 129 GVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSL----VVTLWYR 184
G+KY+H VLHRDLK SNLLLN LKI DFG++R P +T V T WYR
Sbjct: 136 GLKYIHSANVLHRDLKPSNLLLNTTXDLKIXDFGLAR-VADPDHDHTGFLTEYVATRWYR 194
Query: 185 APELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPG 244
APE++L +K Y+ ++D+WSVGCI+AE+L+ +P+F G +DQ++ I LG+P++
Sbjct: 195 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNX 254
Query: 245 LSELPGAKANFA-----KQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRIT 299
+ L + K P+N L FP A DLL+++LT++P KRI
Sbjct: 255 IINLKARNYLLSLPHKNKVPWNRL---FPNA--------DSKALDLLDKMLTFNPHKRIE 303
Query: 300 VDDALNHYWFHE 311
V+ AL H + +
Sbjct: 304 VEQALAHPYLEQ 315
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 181 bits (458), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 120/357 (33%), Positives = 193/357 (54%), Gaps = 58/357 (16%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILL 71
++E + K+ +G YGIV+++ D+++GE+VA+KK+ D + REI IL
Sbjct: 10 KYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQR------TFREIMILT 63
Query: 72 SFD-HPSIVNVKEVVMDDHD-SVYMVMEYMEHDLKWLMES-MKQPFSTSEVKCLMLQLLE 128
H +IVN+ V+ D+D VY+V +YME DL ++ + + +P V + QL++
Sbjct: 64 ELSGHENIVNLLNVLRADNDRDVYLVFDYMETDLHAVIRANILEPVHKQYV---VYQLIK 120
Query: 129 GVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGS--------PL--------- 171
+KYLH +LHRD+K SN+LLN + +K+ DFG+SR + + PL
Sbjct: 121 VIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENF 180
Query: 172 ---KPY-TSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQI 227
+P T V T WYRAPE+LLG+ KY+ +DMWS+GCI+ E+L KP+F G++ ++Q+
Sbjct: 181 DDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQL 240
Query: 228 DKIFKTLGTPT------------ETIWPGLSELPGAKANFAKQPY----NLLRKRFPAAS 271
++I + P+ +T+ L E + + + + NLL K P A
Sbjct: 241 ERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKAD 300
Query: 272 FTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYW---FHEVPLPKSKDFMPTFP 325
+E DLL++LL ++P KRI+ +DAL H + FH + D + T P
Sbjct: 301 ------CNEEALDLLDKLLQFNPNKRISANDALKHPFVSIFHNPNEEPNCDHIITIP 351
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 174 bits (442), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 101/303 (33%), Positives = 164/303 (54%), Gaps = 13/303 (4%)
Query: 8 RSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREI 67
+S+ ++E L + EG+YG+V + R+K +G IVA+KK + K ++REI
Sbjct: 22 QSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKM------VKKIAMREI 75
Query: 68 NILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLL 127
+L H ++VN+ EV Y+V E+++H + +E V+ + Q++
Sbjct: 76 KLLKQLRHENLVNLLEVC-KKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQII 134
Query: 128 EGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPE 187
G+ + H + ++HRD+K N+L++ GV+K+CDFG +R +P + Y V T WYRAPE
Sbjct: 135 NGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPE 194
Query: 188 LLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSE 247
LL+G KY AVD+W++GC++ E+ +PLF G +++DQ+ I LG + P E
Sbjct: 195 LLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLG----NLIPRHQE 250
Query: 248 LPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHY 307
L FA +++R P P LSE DL + L DP+KR + L+H
Sbjct: 251 LFNKNPVFAGVRLPEIKEREPLER--RYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHD 308
Query: 308 WFH 310
+F
Sbjct: 309 FFQ 311
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 173 bits (438), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 103/307 (33%), Positives = 170/307 (55%), Gaps = 25/307 (8%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILL 71
++EK+ KI EG+YG+V++ R++ +G+IVA+KK + ++D + +LREI +L
Sbjct: 4 KYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKF---LESEDDPV---IKKIALREIRMLK 57
Query: 72 SFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVK 131
HP++VN+ EV +++V EY +H + ++ ++ VK + Q L+ V
Sbjct: 58 QLKHPNLVNLLEVFRRKR-RLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVN 116
Query: 132 YLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLG 191
+ H + +HRD+K N+L+ V+K+CDFG +R P Y V T WYR+PELL+G
Sbjct: 117 FCHKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVG 176
Query: 192 AKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGA 251
+Y VD+W++GC+ AELL+ PL+ G ++VDQ+ I KTLG + P ++
Sbjct: 177 DTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLG----DLIPRHQQVFST 232
Query: 252 KANFAK----QPYNL--LRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALN 305
F+ P ++ L +FP S+ P L LL L DP +R+T + L+
Sbjct: 233 NQYFSGVKIPDPEDMEPLELKFPNISY---PALG-----LLKGCLHMDPTERLTCEQLLH 284
Query: 306 HYWFHEV 312
H +F +
Sbjct: 285 HPYFENI 291
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 172 bits (436), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 104/305 (34%), Positives = 160/305 (52%), Gaps = 22/305 (7%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
+ L + G YG V A D ++G VA+KK+ + F + RE+ +L
Sbjct: 27 YRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSEL------FAKRAYRELRLLKH 80
Query: 73 FDHPSIVNVKEV-----VMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLL 127
H +++ + +V +DD Y+VM +M DL LM+ K ++ L+ Q+L
Sbjct: 81 MRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEK--LGEDRIQFLVYQML 138
Query: 128 EGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPE 187
+G++Y+H ++HRDLK NL +N LKI DFG++RQ S + VVT WYRAPE
Sbjct: 139 KGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSEM---XGXVVTRWYRAPE 195
Query: 188 LLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSE 247
++L +Y+ VD+WSVGCIMAE++ K LF G+ +DQ+ +I K GTP L
Sbjct: 196 VILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQS 255
Query: 248 LPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHY 307
N+ K L +K F + SP+ +LL ++L D E+R+T +AL H
Sbjct: 256 --DEAKNYMKGLPELEKKDFASILTNASPL----AVNLLEKMLVLDAEQRVTAGEALAHP 309
Query: 308 WFHEV 312
+F +
Sbjct: 310 YFESL 314
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 169 bits (427), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 109/334 (32%), Positives = 177/334 (52%), Gaps = 36/334 (10%)
Query: 4 LQGCRSVFEFEKLNK--------------ISEGTYGIVYRARDKKSGEIVALKKVKMNVG 49
+ G R+ F ++LNK + G YG V A D + + VA+KK+
Sbjct: 7 MSGPRAGFYRQELNKTVWEVPQRLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKL----S 62
Query: 50 RKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVV-----MDDHDSVYMVMEYMEHDLK 104
R L + + RE+ +L H +++ + +V ++D VY+V M DL
Sbjct: 63 RPFQSLIHAR--RTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLN 120
Query: 105 WLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMS 164
+++S Q S V+ L+ QLL G+KY+H ++HRDLK SN+ +N L+I DFG++
Sbjct: 121 NIVKS--QALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLA 178
Query: 165 RQYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEV 224
RQ + Y V T WYRAPE++L Y+ VD+WSVGCIMAELL K LF G+ +
Sbjct: 179 RQADEEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYI 235
Query: 225 DQIDKIFKTLGTPTETIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFD 284
DQ+ +I + +GTP+ + L+++ A Q + ++ ++ F G+ L+ D
Sbjct: 236 DQLKRIMEVVGTPSPEV---LAKISSEHARTYIQSLPPMPQKDLSSIFRGANPLA---ID 289
Query: 285 LLNRLLTYDPEKRITVDDALNHYWFHEVPLPKSK 318
LL R+L D ++R++ +AL H +F + P+ +
Sbjct: 290 LLGRMLVLDSDQRVSAAEALAHAYFSQYHDPEDE 323
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 169 bits (427), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 105/308 (34%), Positives = 167/308 (54%), Gaps = 22/308 (7%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
++ L+ + G YG V + D KSG +A+KK+ R + + + RE+ +L
Sbjct: 53 YQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKL----SRPFQSIIHA--KRTYRELRLLKH 106
Query: 73 FDHPSIVNVKEVV-----MDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLL 127
H +++ + +V +++ + VY+V M DL +++ K + V+ L+ Q+L
Sbjct: 107 MKHENVIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQIL 164
Query: 128 EGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPE 187
G+KY+H ++HRDLK SNL +N LKI DFG++R + Y V T WYRAPE
Sbjct: 165 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPE 221
Query: 188 LLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSE 247
++L Y+ VD+WSVGCIMAELL + LF GT ++Q+ +I + GTP ++ +S
Sbjct: 222 IMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLTGTPPASV---ISR 278
Query: 248 LPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHY 307
+P +A + KR A F G+ L+ DLL ++L D +KRIT +AL H
Sbjct: 279 MPSHEARNYINSLPQMPKRNFADVFIGANPLA---VDLLEKMLVLDTDKRITASEALAHP 335
Query: 308 WFHEVPLP 315
+F + P
Sbjct: 336 YFSQYHDP 343
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 169 bits (427), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 103/311 (33%), Positives = 164/311 (52%), Gaps = 22/311 (7%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
++ L+ + G YG V A D K+G VA+KK+ R + + + RE+ +L
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL----SRPFQSIIHA--KRTYRELRLLKH 77
Query: 73 FDHPSIVNVKEVV-----MDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLL 127
H +++ + +V +++ + VY+V M DL +++ Q + V+ L+ Q+L
Sbjct: 78 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHVQFLIYQIL 135
Query: 128 EGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPE 187
G+KY+H ++HRDLK SNL +N LKI DFG++R + Y V T WYRAPE
Sbjct: 136 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPE 192
Query: 188 LLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSE 247
++L A Y+ VD+WSVGCIMAELL + LF GT +DQ+ I + +GTP + +S
Sbjct: 193 IMLNAMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 252
Query: 248 LPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHY 307
+ N+ + + + F +P+ DLL ++L D +KRIT AL H
Sbjct: 253 --ESARNYIQSLTQMPKMNFANVFIGANPL----AVDLLEKMLVLDSDKRITAAQALAHA 306
Query: 308 WFHEVPLPKSK 318
+F + P +
Sbjct: 307 YFAQYHDPDDE 317
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 167 bits (424), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 107/297 (36%), Positives = 158/297 (53%), Gaps = 25/297 (8%)
Query: 19 ISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSI 78
+ G YG V A DK+SGE VA+KK+ + F + RE+ +L H ++
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSE------IFAKRAYRELLLLKHMQHENV 103
Query: 79 VNVKEVV-----MDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYL 133
+ + +V + + Y+VM +M+ DL+ +M FS +++ L+ Q+L+G+KY+
Sbjct: 104 IGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIM---GMEFSEEKIQYLVYQMLKGLKYI 160
Query: 134 HDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGAK 193
H V+HRDLK NL +N LKI DFG++R + + T VVT WYRAPE++L
Sbjct: 161 HSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAEM---TGYVVTRWYRAPEVILSWM 217
Query: 194 KYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGAKA 253
Y+ VD+WSVGCIMAE+L K LF G +DQ+ +I K G P L++ AK+
Sbjct: 218 HYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLND-KAAKS 276
Query: 254 NFAKQPYNLLRKRFPAASFTG-SPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWF 309
P + P FT P S DLL ++L D +KR+T AL H +F
Sbjct: 277 YIQSLP------QTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFF 327
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 167 bits (423), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 108/297 (36%), Positives = 160/297 (53%), Gaps = 25/297 (8%)
Query: 19 ISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSI 78
+ G YG V A DK+SGE VA+KK+ + F + RE+ +L H ++
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSE------IFAKRAYRELLLLKHMQHENV 85
Query: 79 VNVKEVV-----MDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYL 133
+ + +V + + Y+VM +M+ DL+ +M +K FS +++ L+ Q+L+G+KY+
Sbjct: 86 IGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIM-GLK--FSEEKIQYLVYQMLKGLKYI 142
Query: 134 HDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGAK 193
H V+HRDLK NL +N LKI DFG++R + + T VVT WYRAPE++L
Sbjct: 143 HSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAEM---TGYVVTRWYRAPEVILSWM 199
Query: 194 KYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGAKA 253
Y+ VD+WSVGCIMAE+L K LF G +DQ+ +I K G P L++ AK+
Sbjct: 200 HYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLND-KAAKS 258
Query: 254 NFAKQPYNLLRKRFPAASFTG-SPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWF 309
P + P FT P S DLL ++L D +KR+T AL H +F
Sbjct: 259 YIQSLP------QTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFF 309
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 167 bits (423), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 103/311 (33%), Positives = 163/311 (52%), Gaps = 22/311 (7%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
++ L+ + G YG V A D K+G VA+KK+ R + + + RE+ +L
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL----SRPFQSIIHA--KRTYRELRLLKH 77
Query: 73 FDHPSIVNVKEVV-----MDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLL 127
H +++ + +V +++ + VY+V M DL +++S K + V+ L+ Q+L
Sbjct: 78 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKSQK--LTDDHVQFLIYQIL 135
Query: 128 EGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPE 187
G+KY+H ++HRDLK SNL +N LKI DFG+ R + Y V T WYRAPE
Sbjct: 136 RGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEMTGY---VATRWYRAPE 192
Query: 188 LLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSE 247
++L Y+ VD+WSVGCIMAELL + LF GT +DQ+ I + +GTP + +S
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 252
Query: 248 LPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHY 307
+ N+ + + + F +P+ DLL ++L D +KRIT AL H
Sbjct: 253 --ESARNYIQSLTQMPKMNFANVFIGANPL----AVDLLEKMLVLDSDKRITAAQALAHA 306
Query: 308 WFHEVPLPKSK 318
+F + P +
Sbjct: 307 YFAQYHDPDDE 317
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 167 bits (422), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 105/311 (33%), Positives = 166/311 (53%), Gaps = 22/311 (7%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
++ L+ + G YG V A D K+G VA+KK+ R + + + RE+ +L
Sbjct: 44 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKL----SRPFQSIIHA--KRTYRELRLLKH 97
Query: 73 FDHPSIVNVKEVV-----MDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLL 127
H +++ + +V +++ + VY+V M DL +++ Q + V+ L+ Q+L
Sbjct: 98 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHVQFLIYQIL 155
Query: 128 EGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPE 187
G+KY+H ++HRDLK SNL +N LKI DFG++R + Y V T WYRAPE
Sbjct: 156 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPE 212
Query: 188 LLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSE 247
++L Y+ VD+WSVGCIMAELL + LF GT +DQ+ I + +GTP + +S
Sbjct: 213 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 272
Query: 248 LPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHY 307
+ N+ + + + F A F G+ L+ DLL ++L D +KRIT AL H
Sbjct: 273 --ESARNYIQSLAQMPKMNF-ANVFIGANPLA---VDLLEKMLVLDSDKRITAAQALAHA 326
Query: 308 WFHEVPLPKSK 318
+F + P +
Sbjct: 327 YFAQYHDPDDE 337
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 167 bits (422), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 106/320 (33%), Positives = 166/320 (51%), Gaps = 25/320 (7%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
++ L+ + G YG V A D K+G VA+KK+ R + + + RE+ +L
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL----SRPFQSIIHA--KRTYRELRLLKH 77
Query: 73 FDHPSIVNVKEVV-----MDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLL 127
H +++ + +V +++ + VY+V M DL +++ K + V+ L+ Q+L
Sbjct: 78 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQIL 135
Query: 128 EGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPE 187
G+KY+H ++HRDLK SNL +N LKI DFG++R + Y V T WYRAPE
Sbjct: 136 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPE 192
Query: 188 LLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSE 247
++L Y+ VD+WSVGCIMAELL + LF GT +DQ+ I + +GTP + +S
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 252
Query: 248 LPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHY 307
+ N+ + + + F +P+ DLL ++L D +KRIT AL H
Sbjct: 253 --ESARNYIQSLTQMPKMNFANVFIGANPL----AVDLLEKMLVLDSDKRITAAQALAHA 306
Query: 308 WFHEVPLPKSKDFMPTFPPQ 327
+F + P D P PQ
Sbjct: 307 YFAQYHDP---DDEPVADPQ 323
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 167 bits (422), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 105/311 (33%), Positives = 166/311 (53%), Gaps = 22/311 (7%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
++ L+ + G YG V A D K+G VA+KK+ R + + + RE+ +L
Sbjct: 43 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKL----SRPFQSIIHA--KRTYRELRLLKH 96
Query: 73 FDHPSIVNVKEVV-----MDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLL 127
H +++ + +V +++ + VY+V M DL +++ K + V+ L+ Q+L
Sbjct: 97 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQIL 154
Query: 128 EGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPE 187
G+KY+H ++HRDLK SNL +N LKI DFG++R + Y V T WYRAPE
Sbjct: 155 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPE 211
Query: 188 LLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSE 247
++L Y+ VD+WSVGCIMAELL + LF GT +DQ+ I + +GTP + +S
Sbjct: 212 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 271
Query: 248 LPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHY 307
+ N+ + + + F A F G+ L+ DLL ++L D +KRIT AL H
Sbjct: 272 --ESARNYIQSLAQMPKMNF-ANVFIGANPLA---VDLLEKMLVLDSDKRITAAQALAHA 325
Query: 308 WFHEVPLPKSK 318
+F + P +
Sbjct: 326 YFAQYHDPDDE 336
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 167 bits (422), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 102/311 (32%), Positives = 163/311 (52%), Gaps = 22/311 (7%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
++ L+ + G YG V A D K+G VA+KK+ R + + + RE+ +L
Sbjct: 30 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKL----SRPFQSIIHA--KRTYRELRLLKH 83
Query: 73 FDHPSIVNVKEVV-----MDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLL 127
H +++ + +V +++ + VY+V M DL +++ Q + V+ L+ Q+L
Sbjct: 84 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHVQFLIYQIL 141
Query: 128 EGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPE 187
G+KY+H ++HRDLK SNL +N LKI DFG++R + Y V T WYRAPE
Sbjct: 142 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPE 198
Query: 188 LLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSE 247
++L Y+ VD+WSVGCIMAELL + LF GT +DQ+ I + +GTP + +S
Sbjct: 199 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 258
Query: 248 LPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHY 307
+ N+ + + + F +P+ DLL ++L D +KRIT AL H
Sbjct: 259 --ESARNYIQSLAQMPKMNFANVFIGANPL----AVDLLEKMLVLDSDKRITAAQALAHA 312
Query: 308 WFHEVPLPKSK 318
+F + P +
Sbjct: 313 YFAQYHDPDDE 323
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 166 bits (421), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 108/334 (32%), Positives = 176/334 (52%), Gaps = 36/334 (10%)
Query: 4 LQGCRSVFEFEKLNK--------------ISEGTYGIVYRARDKKSGEIVALKKVKMNVG 49
+ G R+ F ++LNK + G YG V A D + + VA+KK+
Sbjct: 7 MSGPRAGFYRQELNKTVWEVPQRLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKL----S 62
Query: 50 RKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVV-----MDDHDSVYMVMEYMEHDLK 104
R L + + RE+ +L H +++ + +V ++D VY+V M DL
Sbjct: 63 RPFQSLIHAR--RTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLN 120
Query: 105 WLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMS 164
+++ Q S V+ L+ QLL G+KY+H ++HRDLK SN+ +N L+I DFG++
Sbjct: 121 NIVKC--QALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLA 178
Query: 165 RQYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEV 224
RQ + Y V T WYRAPE++L Y+ VD+WSVGCIMAELL K LF G+ +
Sbjct: 179 RQADEEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYI 235
Query: 225 DQIDKIFKTLGTPTETIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFD 284
DQ+ +I + +GTP+ + L+++ A Q + ++ ++ F G+ L+ D
Sbjct: 236 DQLKRIMEVVGTPSPEV---LAKISSEHARTYIQSLPPMPQKDLSSIFRGANPLA---ID 289
Query: 285 LLNRLLTYDPEKRITVDDALNHYWFHEVPLPKSK 318
LL R+L D ++R++ +AL H +F + P+ +
Sbjct: 290 LLGRMLVLDSDQRVSAAEALAHAYFSQYHDPEDE 323
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 166 bits (421), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 102/311 (32%), Positives = 163/311 (52%), Gaps = 22/311 (7%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
++ L+ + G YG V A D K+G VA+KK+ R + + + RE+ +L
Sbjct: 20 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKL----SRPFQSIIHA--KRTYRELRLLKH 73
Query: 73 FDHPSIVNVKEVV-----MDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLL 127
H +++ + +V +++ + VY+V M DL +++ Q + V+ L+ Q+L
Sbjct: 74 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHVQFLIYQIL 131
Query: 128 EGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPE 187
G+KY+H ++HRDLK SNL +N LKI DFG++R + Y V T WYRAPE
Sbjct: 132 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPE 188
Query: 188 LLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSE 247
++L Y+ VD+WSVGCIMAELL + LF GT +DQ+ I + +GTP + +S
Sbjct: 189 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 248
Query: 248 LPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHY 307
+ N+ + + + F +P+ DLL ++L D +KRIT AL H
Sbjct: 249 --ESARNYIQSLAQMPKMNFANVFIGANPL----AVDLLEKMLVLDSDKRITAAQALAHA 302
Query: 308 WFHEVPLPKSK 318
+F + P +
Sbjct: 303 YFAQYHDPDDE 313
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 166 bits (421), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 102/311 (32%), Positives = 163/311 (52%), Gaps = 22/311 (7%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
++ L+ + G YG V A D K+G VA+KK+ R + + + RE+ +L
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKL----SRPFQSIIHA--KRTYRELRLLKH 77
Query: 73 FDHPSIVNVKEVV-----MDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLL 127
H +++ + +V +++ + VY+V M DL +++ Q + V+ L+ Q+L
Sbjct: 78 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHVQFLIYQIL 135
Query: 128 EGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPE 187
G+KY+H ++HRDLK SNL +N LKI DFG++R + Y V T WYRAPE
Sbjct: 136 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPE 192
Query: 188 LLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSE 247
++L Y+ VD+WSVGCIMAELL + LF GT +DQ+ I + +GTP + +S
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 252
Query: 248 LPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHY 307
+ N+ + + + F +P+ DLL ++L D +KRIT AL H
Sbjct: 253 --ESARNYIQSLAQMPKMNFANVFIGANPL----AVDLLEKMLVLDSDKRITAAQALAHA 306
Query: 308 WFHEVPLPKSK 318
+F + P +
Sbjct: 307 YFAQYHDPDDE 317
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 166 bits (421), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 102/311 (32%), Positives = 163/311 (52%), Gaps = 22/311 (7%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
++ L+ + G YG V A D K+G VA+KK+ R + + + RE+ +L
Sbjct: 20 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKL----SRPFQSIIHA--KRTYRELRLLKH 73
Query: 73 FDHPSIVNVKEVV-----MDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLL 127
H +++ + +V +++ + VY+V M DL +++ K + V+ L+ Q+L
Sbjct: 74 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCAK--LTDDHVQFLIYQIL 131
Query: 128 EGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPE 187
G+KY+H ++HRDLK SNL +N LKI DFG++R + Y V T WYRAPE
Sbjct: 132 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPE 188
Query: 188 LLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSE 247
++L Y+ VD+WSVGCIMAELL + LF GT +DQ+ I + +GTP + +S
Sbjct: 189 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 248
Query: 248 LPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHY 307
+ N+ + + + F +P+ DLL ++L D +KRIT AL H
Sbjct: 249 --ESARNYIQSLAQMPKMNFANVFIGANPL----AVDLLEKMLVLDSDKRITAAQALAHA 302
Query: 308 WFHEVPLPKSK 318
+F + P +
Sbjct: 303 YFAQYHDPDDE 313
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 166 bits (420), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 102/311 (32%), Positives = 163/311 (52%), Gaps = 22/311 (7%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
++ L+ + G YG V A D K+G VA+KK+ R + + + RE+ +L
Sbjct: 31 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL----SRPFQSIIHA--KRTYRELRLLKH 84
Query: 73 FDHPSIVNVKEVV-----MDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLL 127
H +++ + +V +++ + VY+V M DL +++ Q + V+ L+ Q+L
Sbjct: 85 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHVQFLIYQIL 142
Query: 128 EGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPE 187
G+KY+H ++HRDLK SNL +N LKI DFG++R + Y V T WYRAPE
Sbjct: 143 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGY---VATRWYRAPE 199
Query: 188 LLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSE 247
++L Y+ VD+WSVGCIMAELL + LF GT +DQ+ I + +GTP + +S
Sbjct: 200 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 259
Query: 248 LPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHY 307
+ N+ + + + F +P+ DLL ++L D +KRIT AL H
Sbjct: 260 --ESARNYIQSLTQMPKMNFANVFIGANPL----AVDLLEKMLVLDSDKRITAAQALAHA 313
Query: 308 WFHEVPLPKSK 318
+F + P +
Sbjct: 314 YFAQYHDPDDE 324
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 166 bits (420), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 103/311 (33%), Positives = 163/311 (52%), Gaps = 22/311 (7%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
++ L+ I G YG V A D K+G VA+KK+ R + + + RE+ +L
Sbjct: 29 YQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKL----SRPFQSIIHA--KRTYRELRLLKH 82
Query: 73 FDHPSIVNVKEVV-----MDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLL 127
H +++ + +V +++ + VY+V M DL +++ K + V+ L+ Q+L
Sbjct: 83 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQIL 140
Query: 128 EGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPE 187
G+KY+H ++HRDLK SNL +N LKI DFG++R + Y V T WYRAPE
Sbjct: 141 RGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGY---VATRWYRAPE 197
Query: 188 LLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSE 247
++L Y+ VD+WSVGCIMAELL + LF GT +DQ+ I + +GTP + +S
Sbjct: 198 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 257
Query: 248 LPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHY 307
+ N+ + + + F +P+ DLL ++L D +KRIT AL H
Sbjct: 258 --ESARNYIQSLTQMPKMNFANVFIGANPL----AVDLLEKMLVLDSDKRITAAQALAHA 311
Query: 308 WFHEVPLPKSK 318
+F + P +
Sbjct: 312 YFAQYHDPDDE 322
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 166 bits (420), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 102/311 (32%), Positives = 163/311 (52%), Gaps = 22/311 (7%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
++ L+ + G YG V A D K+G VA+KK+ R + + + RE+ +L
Sbjct: 31 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL----SRPFQSIIHA--KRTYRELRLLKH 84
Query: 73 FDHPSIVNVKEVV-----MDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLL 127
H +++ + +V +++ + VY+V M DL +++ Q + V+ L+ Q+L
Sbjct: 85 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHVQFLIYQIL 142
Query: 128 EGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPE 187
G+KY+H ++HRDLK SNL +N LKI DFG++R + Y V T WYRAPE
Sbjct: 143 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGY---VATRWYRAPE 199
Query: 188 LLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSE 247
++L Y+ VD+WSVGCIMAELL + LF GT +DQ+ I + +GTP + +S
Sbjct: 200 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 259
Query: 248 LPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHY 307
+ N+ + + + F +P+ DLL ++L D +KRIT AL H
Sbjct: 260 --ESARNYIQSLTQMPKMNFANVFIGANPL----AVDLLEKMLVLDSDKRITAAQALAHA 313
Query: 308 WFHEVPLPKSK 318
+F + P +
Sbjct: 314 YFAQYHDPDDE 324
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 166 bits (420), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 102/311 (32%), Positives = 163/311 (52%), Gaps = 22/311 (7%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
++ L+ + G YG V A D K+G VA+KK+ R + + + RE+ +L
Sbjct: 30 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL----SRPFQSIIHA--KRTYRELRLLKH 83
Query: 73 FDHPSIVNVKEVV-----MDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLL 127
H +++ + +V +++ + VY+V M DL +++ Q + V+ L+ Q+L
Sbjct: 84 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHVQFLIYQIL 141
Query: 128 EGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPE 187
G+KY+H ++HRDLK SNL +N LKI DFG++R + Y V T WYRAPE
Sbjct: 142 RGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGY---VATRWYRAPE 198
Query: 188 LLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSE 247
++L Y+ VD+WSVGCIMAELL + LF GT +DQ+ I + +GTP + +S
Sbjct: 199 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 258
Query: 248 LPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHY 307
+ N+ + + + F +P+ DLL ++L D +KRIT AL H
Sbjct: 259 --ESARNYIQSLTQMPKMNFANVFIGANPL----AVDLLEKMLVLDSDKRITAAQALAHA 312
Query: 308 WFHEVPLPKSK 318
+F + P +
Sbjct: 313 YFAQYHDPDDE 323
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 166 bits (420), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 102/311 (32%), Positives = 163/311 (52%), Gaps = 22/311 (7%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
++ L+ + G YG V A D K+G VA+KK+ R + + + RE+ +L
Sbjct: 31 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL----SRPFQSIIHA--KRTYRELRLLKH 84
Query: 73 FDHPSIVNVKEVV-----MDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLL 127
H +++ + +V +++ + VY+V M DL +++ Q + V+ L+ Q+L
Sbjct: 85 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHVQFLIYQIL 142
Query: 128 EGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPE 187
G+KY+H ++HRDLK SNL +N LKI DFG++R + Y V T WYRAPE
Sbjct: 143 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGY---VATRWYRAPE 199
Query: 188 LLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSE 247
++L Y+ VD+WSVGCIMAELL + LF GT +DQ+ I + +GTP + +S
Sbjct: 200 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 259
Query: 248 LPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHY 307
+ N+ + + + F +P+ DLL ++L D +KRIT AL H
Sbjct: 260 --ESARNYIQSLTQMPKMNFANVFIGANPL----AVDLLEKMLVLDSDKRITAAQALAHA 313
Query: 308 WFHEVPLPKSK 318
+F + P +
Sbjct: 314 YFAQYHDPDDE 324
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 166 bits (420), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 102/311 (32%), Positives = 163/311 (52%), Gaps = 22/311 (7%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
++ L+ + G YG V A D K+G VA+KK+ R + + + RE+ +L
Sbjct: 26 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL----SRPFQSIIHA--KRTYRELRLLKH 79
Query: 73 FDHPSIVNVKEVV-----MDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLL 127
H +++ + +V +++ + VY+V M DL +++ Q + V+ L+ Q+L
Sbjct: 80 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHVQFLIYQIL 137
Query: 128 EGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPE 187
G+KY+H ++HRDLK SNL +N LKI DFG++R + Y V T WYRAPE
Sbjct: 138 RGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGY---VATRWYRAPE 194
Query: 188 LLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSE 247
++L Y+ VD+WSVGCIMAELL + LF GT +DQ+ I + +GTP + +S
Sbjct: 195 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 254
Query: 248 LPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHY 307
+ N+ + + + F +P+ DLL ++L D +KRIT AL H
Sbjct: 255 --ESARNYIQSLTQMPKMNFANVFIGANPL----AVDLLEKMLVLDSDKRITAAQALAHA 308
Query: 308 WFHEVPLPKSK 318
+F + P +
Sbjct: 309 YFAQYHDPDDE 319
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 166 bits (419), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 102/311 (32%), Positives = 162/311 (52%), Gaps = 22/311 (7%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
++ L + G YG V A D K+G VA+KK+ R + + + RE+ +L
Sbjct: 34 YQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKL----SRPFQSIIHA--KRTYRELRLLKH 87
Query: 73 FDHPSIVNVKEVV-----MDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLL 127
H +++ + +V +++ + VY+V M DL +++ K + V+ L+ Q+L
Sbjct: 88 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQIL 145
Query: 128 EGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPE 187
G+KY+H ++HRDLK SNL +N LKI DFG++R + Y V T WYRAPE
Sbjct: 146 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPE 202
Query: 188 LLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSE 247
++L Y+ VD+WSVGCIMAELL + LF GT +DQ+ I + +GTP + +S
Sbjct: 203 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 262
Query: 248 LPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHY 307
+ N+ + + + F +P+ DLL ++L D +KRIT AL H
Sbjct: 263 --ESARNYIQSLAQMPKMNFANVFIGANPL----AVDLLEKMLVLDSDKRITAAQALAHA 316
Query: 308 WFHEVPLPKSK 318
+F + P +
Sbjct: 317 YFAQYHDPDDE 327
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 166 bits (419), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 102/311 (32%), Positives = 163/311 (52%), Gaps = 22/311 (7%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
++ L+ + G YG V A D K+G VA+KK+ R + + + RE+ +L
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL----SRPFQSIIHA--KRTYRELRLLKH 77
Query: 73 FDHPSIVNVKEVV-----MDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLL 127
H +++ + +V +++ + VY+V M DL +++ Q + V+ L+ Q+L
Sbjct: 78 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHVQFLIYQIL 135
Query: 128 EGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPE 187
G+KY+H ++HRDLK SNL +N LKI DFG++R + Y V T WYRAPE
Sbjct: 136 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPE 192
Query: 188 LLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSE 247
++L Y+ VD+WSVGCIMAELL + LF GT +DQ+ I + +GTP + +S
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 252
Query: 248 LPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHY 307
+ N+ + + + F +P+ DLL ++L D +KRIT AL H
Sbjct: 253 --ESARNYIQSLTQMPKMNFANVFIGANPL----AVDLLEKMLVLDSDKRITAAQALAHA 306
Query: 308 WFHEVPLPKSK 318
+F + P +
Sbjct: 307 YFAQYHDPDDE 317
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 166 bits (419), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 105/311 (33%), Positives = 166/311 (53%), Gaps = 22/311 (7%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
++ L+ + G YG V A D K+G VA+KK+ R + + + RE+ +L
Sbjct: 44 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL----SRPFQSIIHA--KRTYRELRLLKH 97
Query: 73 FDHPSIVNVKEVV-----MDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLL 127
H +++ + +V +++ + VY+V M DL +++ Q + V+ L+ Q+L
Sbjct: 98 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHVQFLIYQIL 155
Query: 128 EGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPE 187
G+KY+H ++HRDLK SNL +N LKI DFG++R + Y V T WYRAPE
Sbjct: 156 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPE 212
Query: 188 LLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSE 247
++L Y+ VD+WSVGCIMAELL + LF GT +DQ+ I + +GTP + +S
Sbjct: 213 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 272
Query: 248 LPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHY 307
+ N+ + + + F A F G+ L+ DLL ++L D +KRIT AL H
Sbjct: 273 --ESARNYIQSLTQMPKMNF-ANVFIGANPLA---VDLLEKMLVLDSDKRITAAQALAHA 326
Query: 308 WFHEVPLPKSK 318
+F + P +
Sbjct: 327 YFAQYHDPDDE 337
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 166 bits (419), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 102/311 (32%), Positives = 163/311 (52%), Gaps = 22/311 (7%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
++ L+ + G YG V A D K+G VA+KK+ R + + + RE+ +L
Sbjct: 30 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL----SRPFQSIIHA--KRTYRELRLLKH 83
Query: 73 FDHPSIVNVKEVV-----MDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLL 127
H +++ + +V +++ + VY+V M DL +++ Q + V+ L+ Q+L
Sbjct: 84 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHVQFLIYQIL 141
Query: 128 EGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPE 187
G+KY+H ++HRDLK SNL +N LKI DFG++R + Y V T WYRAPE
Sbjct: 142 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPE 198
Query: 188 LLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSE 247
++L Y+ VD+WSVGCIMAELL + LF GT +DQ+ I + +GTP + +S
Sbjct: 199 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 258
Query: 248 LPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHY 307
+ N+ + + + F +P+ DLL ++L D +KRIT AL H
Sbjct: 259 --ESARNYIQSLTQMPKMNFANVFIGANPL----AVDLLEKMLVLDSDKRITAAQALAHA 312
Query: 308 WFHEVPLPKSK 318
+F + P +
Sbjct: 313 YFAQYHDPDDE 323
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 166 bits (419), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 102/311 (32%), Positives = 163/311 (52%), Gaps = 22/311 (7%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
++ L+ + G YG V A D K+G VA+KK+ R + + + RE+ +L
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL----SRPFQSIIHA--KRTYRELRLLKH 77
Query: 73 FDHPSIVNVKEVV-----MDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLL 127
H +++ + +V +++ + VY+V M DL +++ Q + V+ L+ Q+L
Sbjct: 78 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHVQFLIYQIL 135
Query: 128 EGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPE 187
G+KY+H ++HRDLK SNL +N LKI DFG++R + Y V T WYRAPE
Sbjct: 136 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPE 192
Query: 188 LLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSE 247
++L Y+ VD+WSVGCIMAELL + LF GT +DQ+ I + +GTP + +S
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 252
Query: 248 LPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHY 307
+ N+ + + + F +P+ DLL ++L D +KRIT AL H
Sbjct: 253 --ESARNYIQSLTQMPKMNFANVFIGANPL----AVDLLEKMLVLDSDKRITAAQALAHA 306
Query: 308 WFHEVPLPKSK 318
+F + P +
Sbjct: 307 YFAQYHDPDDE 317
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 166 bits (419), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 102/311 (32%), Positives = 163/311 (52%), Gaps = 22/311 (7%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
++ L+ + G YG V A D K+G VA+KK+ R + + + RE+ +L
Sbjct: 29 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL----SRPFQSIIHA--KRTYRELRLLKH 82
Query: 73 FDHPSIVNVKEVV-----MDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLL 127
H +++ + +V +++ + VY+V M DL +++ K + V+ L+ Q+L
Sbjct: 83 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQIL 140
Query: 128 EGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPE 187
G+KY+H ++HRDLK SNL +N LKI DFG++R + Y V T WYRAPE
Sbjct: 141 RGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGY---VATRWYRAPE 197
Query: 188 LLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSE 247
++L Y+ VD+WSVGCIMAELL + LF GT +DQ+ I + +GTP + +S
Sbjct: 198 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 257
Query: 248 LPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHY 307
+ N+ + + + F +P+ DLL ++L D +KRIT AL H
Sbjct: 258 --ESARNYIQSLTQMPKMNFANVFIGANPL----AVDLLEKMLVLDSDKRITAAQALAHA 311
Query: 308 WFHEVPLPKSK 318
+F + P +
Sbjct: 312 YFAQYHDPDDE 322
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 166 bits (419), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 103/311 (33%), Positives = 168/311 (54%), Gaps = 22/311 (7%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
+ L + G YG V A D + + VA+KK+ R L + + RE+ +L
Sbjct: 22 LQGLRPVGSGAYGSVCSAYDARLRQKVAVKKL----SRPFQSLIHAR--RTYRELRLLKH 75
Query: 73 FDHPSIVNVKEVV-----MDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLL 127
H +++ + +V ++D VY+V M DL +++ Q S V+ L+ QLL
Sbjct: 76 LKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKC--QALSDEHVQFLVYQLL 133
Query: 128 EGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPE 187
G+KY+H ++HRDLK SN+ +N L+I DFG++RQ + Y V T WYRAPE
Sbjct: 134 RGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLARQADEEMTGY---VATRWYRAPE 190
Query: 188 LLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSE 247
++L Y+ VD+WSVGCIMAELL K LF G+ +DQ+ +I + +GTP+ + L++
Sbjct: 191 IMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEV---LAK 247
Query: 248 LPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHY 307
+ A Q + ++ ++ F G+ L+ DLL R+L D ++R++ +AL H
Sbjct: 248 ISSEHARTYIQSLPPMPQKDLSSIFRGANPLA---IDLLGRMLVLDSDQRVSAAEALAHA 304
Query: 308 WFHEVPLPKSK 318
+F + P+ +
Sbjct: 305 YFSQYHDPEDE 315
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 166 bits (419), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 102/311 (32%), Positives = 163/311 (52%), Gaps = 22/311 (7%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
++ L+ + G YG V A D K+G VA+KK+ R + + + RE+ +L
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL----SRPFQSIIHA--KRTYRELRLLKH 77
Query: 73 FDHPSIVNVKEVV-----MDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLL 127
H +++ + +V +++ + VY+V M DL +++ Q + V+ L+ Q+L
Sbjct: 78 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKX--QKLTDDHVQFLIYQIL 135
Query: 128 EGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPE 187
G+KY+H ++HRDLK SNL +N LKI DFG++R + Y V T WYRAPE
Sbjct: 136 RGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGY---VATRWYRAPE 192
Query: 188 LLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSE 247
++L Y+ VD+WSVGCIMAELL + LF GT +DQ+ I + +GTP + +S
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 252
Query: 248 LPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHY 307
+ N+ + + + F +P+ DLL ++L D +KRIT AL H
Sbjct: 253 --ESARNYIQSLTQMPKMNFANVFIGANPL----AVDLLEKMLVLDSDKRITAAQALAHA 306
Query: 308 WFHEVPLPKSK 318
+F + P +
Sbjct: 307 YFAQYHDPDDE 317
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 166 bits (419), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 102/311 (32%), Positives = 163/311 (52%), Gaps = 22/311 (7%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
++ L+ + G YG V A D K+G VA+KK+ R + + + RE+ +L
Sbjct: 31 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL----SRPFQSIIHA--KRTYRELRLLKH 84
Query: 73 FDHPSIVNVKEVV-----MDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLL 127
H +++ + +V +++ + VY+V M DL +++ Q + V+ L+ Q+L
Sbjct: 85 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHVQFLIYQIL 142
Query: 128 EGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPE 187
G+KY+H ++HRDLK SNL +N LKI DFG++R + Y V T WYRAPE
Sbjct: 143 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPE 199
Query: 188 LLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSE 247
++L Y+ VD+WSVGCIMAELL + LF GT +DQ+ I + +GTP + +S
Sbjct: 200 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 259
Query: 248 LPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHY 307
+ N+ + + + F +P+ DLL ++L D +KRIT AL H
Sbjct: 260 --ESARNYIQSLTQMPKMNFANVFIGANPL----AVDLLEKMLVLDSDKRITAAQALAHA 313
Query: 308 WFHEVPLPKSK 318
+F + P +
Sbjct: 314 YFAQYHDPDDE 324
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 166 bits (419), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 102/311 (32%), Positives = 163/311 (52%), Gaps = 22/311 (7%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
++ L+ + G YG V A D K+G VA+KK+ R + + + RE+ +L
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL----SRPFQSIIHA--KRTYRELRLLKH 77
Query: 73 FDHPSIVNVKEVV-----MDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLL 127
H +++ + +V +++ + VY+V M DL +++ Q + V+ L+ Q+L
Sbjct: 78 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHVQFLIYQIL 135
Query: 128 EGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPE 187
G+KY+H ++HRDLK SNL +N LKI DFG++R + Y V T WYRAPE
Sbjct: 136 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPE 192
Query: 188 LLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSE 247
++L Y+ VD+WSVGCIMAELL + LF GT +DQ+ I + +GTP + +S
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 252
Query: 248 LPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHY 307
+ N+ + + + F +P+ DLL ++L D +KRIT AL H
Sbjct: 253 --ESARNYIQSLTQMPKMNFANVFIGANPL----AVDLLEKMLVLDSDKRITAAQALAHA 306
Query: 308 WFHEVPLPKSK 318
+F + P +
Sbjct: 307 YFAQYHDPDDE 317
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 166 bits (419), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 105/311 (33%), Positives = 166/311 (53%), Gaps = 22/311 (7%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
++ L+ + G YG V A D K+G VA+KK+ R + + + RE+ +L
Sbjct: 43 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL----SRPFQSIIHA--KRTYRELRLLKH 96
Query: 73 FDHPSIVNVKEVV-----MDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLL 127
H +++ + +V +++ + VY+V M DL +++ K + V+ L+ Q+L
Sbjct: 97 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQIL 154
Query: 128 EGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPE 187
G+KY+H ++HRDLK SNL +N LKI DFG++R + Y V T WYRAPE
Sbjct: 155 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPE 211
Query: 188 LLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSE 247
++L Y+ VD+WSVGCIMAELL + LF GT +DQ+ I + +GTP + +S
Sbjct: 212 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 271
Query: 248 LPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHY 307
+ N+ + + + F A F G+ L+ DLL ++L D +KRIT AL H
Sbjct: 272 --ESARNYIQSLTQMPKMNF-ANVFIGANPLA---VDLLEKMLVLDSDKRITAAQALAHA 325
Query: 308 WFHEVPLPKSK 318
+F + P +
Sbjct: 326 YFAQYHDPDDE 336
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 165 bits (418), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 102/311 (32%), Positives = 163/311 (52%), Gaps = 22/311 (7%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
++ L+ + G YG V A D K+G VA+KK+ R + + + RE+ +L
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL----SRPFQSIIHA--KRTYRELRLLKH 77
Query: 73 FDHPSIVNVKEVV-----MDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLL 127
H +++ + +V +++ + VY+V M DL +++ Q + V+ L+ Q+L
Sbjct: 78 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHVQFLIYQIL 135
Query: 128 EGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPE 187
G+KY+H ++HRDLK SNL +N LKI DFG++R + Y V T WYRAPE
Sbjct: 136 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPE 192
Query: 188 LLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSE 247
++L Y+ VD+WSVGCIMAELL + LF GT +DQ+ I + +GTP + +S
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 252
Query: 248 LPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHY 307
+ N+ + + + F +P+ DLL ++L D +KRIT AL H
Sbjct: 253 --ESARNYIQSLTQMPKMNFANVFIGANPL----AVDLLEKMLVLDSDKRITAAQALAHA 306
Query: 308 WFHEVPLPKSK 318
+F + P +
Sbjct: 307 YFAQYHDPDDE 317
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 165 bits (418), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 105/311 (33%), Positives = 166/311 (53%), Gaps = 22/311 (7%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
++ L+ + G YG V A D K+G VA+KK+ R + + + RE+ +L
Sbjct: 35 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL----SRPFQSIIHA--KRTYRELRLLKH 88
Query: 73 FDHPSIVNVKEVV-----MDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLL 127
H +++ + +V +++ + VY+V M DL +++ Q + V+ L+ Q+L
Sbjct: 89 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHVQFLIYQIL 146
Query: 128 EGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPE 187
G+KY+H ++HRDLK SNL +N LKI DFG++R + Y V T WYRAPE
Sbjct: 147 RGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGY---VATRWYRAPE 203
Query: 188 LLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSE 247
++L Y+ VD+WSVGCIMAELL + LF GT +DQ+ I + +GTP + +S
Sbjct: 204 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 263
Query: 248 LPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHY 307
+ N+ + + + F A F G+ L+ DLL ++L D +KRIT AL H
Sbjct: 264 --ESARNYIQSLTQMPKMNF-ANVFIGANPLA---VDLLEKMLVLDSDKRITAAQALAHA 317
Query: 308 WFHEVPLPKSK 318
+F + P +
Sbjct: 318 YFAQYHDPDDE 328
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 165 bits (418), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 102/311 (32%), Positives = 163/311 (52%), Gaps = 22/311 (7%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
++ L+ + G YG V A D K+G VA+KK+ R + + + RE+ +L
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL----SRPFQSIIHA--KRTYRELRLLKH 77
Query: 73 FDHPSIVNVKEVV-----MDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLL 127
H +++ + +V +++ + VY+V M DL +++ Q + V+ L+ Q+L
Sbjct: 78 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKX--QKLTDDHVQFLIYQIL 135
Query: 128 EGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPE 187
G+KY+H ++HRDLK SNL +N LKI DFG++R + Y V T WYRAPE
Sbjct: 136 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPE 192
Query: 188 LLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSE 247
++L Y+ VD+WSVGCIMAELL + LF GT +DQ+ I + +GTP + +S
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 252
Query: 248 LPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHY 307
+ N+ + + + F +P+ DLL ++L D +KRIT AL H
Sbjct: 253 --ESARNYIQSLTQMPKMNFANVFIGANPL----AVDLLEKMLVLDSDKRITAAQALAHA 306
Query: 308 WFHEVPLPKSK 318
+F + P +
Sbjct: 307 YFAQYHDPDDE 317
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 165 bits (418), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 102/311 (32%), Positives = 163/311 (52%), Gaps = 22/311 (7%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
++ L+ + G YG V A D K+G VA+KK+ R + + + RE+ +L
Sbjct: 47 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL----SRPFQSIIHA--KRTYRELRLLKH 100
Query: 73 FDHPSIVNVKEVV-----MDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLL 127
H +++ + +V +++ + VY+V M DL +++ Q + V+ L+ Q+L
Sbjct: 101 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHVQFLIYQIL 158
Query: 128 EGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPE 187
G+KY+H ++HRDLK SNL +N LKI DFG++R + Y V T WYRAPE
Sbjct: 159 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGY---VATRWYRAPE 215
Query: 188 LLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSE 247
++L Y+ VD+WSVGCIMAELL + LF GT +DQ+ I + +GTP + +S
Sbjct: 216 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 275
Query: 248 LPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHY 307
+ N+ + + + F +P+ DLL ++L D +KRIT AL H
Sbjct: 276 --ESARNYIQSLTQMPKMNFANVFIGANPL----AVDLLEKMLVLDSDKRITAAQALAHA 329
Query: 308 WFHEVPLPKSK 318
+F + P +
Sbjct: 330 YFAQYHDPDDE 340
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 165 bits (418), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 102/311 (32%), Positives = 163/311 (52%), Gaps = 22/311 (7%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
++ L+ + G YG V A D K+G VA+KK+ R + + + RE+ +L
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL----SRPFQSIIHA--KRTYRELRLLKH 77
Query: 73 FDHPSIVNVKEVV-----MDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLL 127
H +++ + +V +++ + VY+V M DL +++ Q + V+ L+ Q+L
Sbjct: 78 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHVQFLIYQIL 135
Query: 128 EGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPE 187
G+KY+H ++HRDLK SNL +N LKI DFG++R + Y V T WYRAPE
Sbjct: 136 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPE 192
Query: 188 LLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSE 247
++L Y+ VD+WSVGCIMAELL + LF GT +DQ+ I + +GTP + +S
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 252
Query: 248 LPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHY 307
+ N+ + + + F +P+ DLL ++L D +KRIT AL H
Sbjct: 253 --ESARNYIQSLTQMPKMNFANVFIGANPL----AVDLLEKMLVLDSDKRITAAQALAHA 306
Query: 308 WFHEVPLPKSK 318
+F + P +
Sbjct: 307 YFAQYHDPDDE 317
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 165 bits (418), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 102/311 (32%), Positives = 163/311 (52%), Gaps = 22/311 (7%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
++ L+ + G YG V A D K+G VA+KK+ R + + + RE+ +L
Sbjct: 21 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL----SRPFQSIIHA--KRTYRELRLLKH 74
Query: 73 FDHPSIVNVKEVV-----MDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLL 127
H +++ + +V +++ + VY+V M DL +++ Q + V+ L+ Q+L
Sbjct: 75 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHVQFLIYQIL 132
Query: 128 EGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPE 187
G+KY+H ++HRDLK SNL +N LKI DFG++R + Y V T WYRAPE
Sbjct: 133 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPE 189
Query: 188 LLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSE 247
++L Y+ VD+WSVGCIMAELL + LF GT +DQ+ I + +GTP + +S
Sbjct: 190 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 249
Query: 248 LPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHY 307
+ N+ + + + F +P+ DLL ++L D +KRIT AL H
Sbjct: 250 --ESARNYIQSLTQMPKMNFANVFIGANPL----AVDLLEKMLVLDSDKRITAAQALAHA 303
Query: 308 WFHEVPLPKSK 318
+F + P +
Sbjct: 304 YFAQYHDPDDE 314
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 165 bits (418), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 102/311 (32%), Positives = 163/311 (52%), Gaps = 22/311 (7%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
++ L+ + G YG V A D K+G VA+KK+ R + + + RE+ +L
Sbjct: 26 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL----SRPFQSIIHA--KRTYRELRLLKH 79
Query: 73 FDHPSIVNVKEVV-----MDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLL 127
H +++ + +V +++ + VY+V M DL +++ Q + V+ L+ Q+L
Sbjct: 80 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHVQFLIYQIL 137
Query: 128 EGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPE 187
G+KY+H ++HRDLK SNL +N LKI DFG++R + Y V T WYRAPE
Sbjct: 138 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPE 194
Query: 188 LLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSE 247
++L Y+ VD+WSVGCIMAELL + LF GT +DQ+ I + +GTP + +S
Sbjct: 195 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 254
Query: 248 LPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHY 307
+ N+ + + + F +P+ DLL ++L D +KRIT AL H
Sbjct: 255 --ESARNYIQSLTQMPKMNFANVFIGANPL----AVDLLEKMLVLDSDKRITAAQALAHA 308
Query: 308 WFHEVPLPKSK 318
+F + P +
Sbjct: 309 YFAQYHDPDDE 319
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 165 bits (418), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 102/311 (32%), Positives = 163/311 (52%), Gaps = 22/311 (7%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
++ L+ + G YG V A D K+G VA+KK+ R + + + RE+ +L
Sbjct: 29 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL----SRPFQSIIHA--KRTYRELRLLKH 82
Query: 73 FDHPSIVNVKEVV-----MDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLL 127
H +++ + +V +++ + VY+V M DL +++ K + V+ L+ Q+L
Sbjct: 83 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQIL 140
Query: 128 EGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPE 187
G+KY+H ++HRDLK SNL +N LKI DFG++R + Y V T WYRAPE
Sbjct: 141 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPE 197
Query: 188 LLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSE 247
++L Y+ VD+WSVGCIMAELL + LF GT +DQ+ I + +GTP + +S
Sbjct: 198 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 257
Query: 248 LPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHY 307
+ N+ + + + F +P+ DLL ++L D +KRIT AL H
Sbjct: 258 --ESARNYIQSLTQMPKMNFANVFIGANPL----AVDLLEKMLVLDSDKRITAAQALAHA 311
Query: 308 WFHEVPLPKSK 318
+F + P +
Sbjct: 312 YFAQYHDPDDE 322
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 165 bits (418), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 102/311 (32%), Positives = 163/311 (52%), Gaps = 22/311 (7%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
++ L+ + G YG V A D K+G VA+KK+ R + + + RE+ +L
Sbjct: 23 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL----SRPFQSIIHA--KRTYRELRLLKH 76
Query: 73 FDHPSIVNVKEVV-----MDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLL 127
H +++ + +V +++ + VY+V M DL +++ K + V+ L+ Q+L
Sbjct: 77 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQIL 134
Query: 128 EGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPE 187
G+KY+H ++HRDLK SNL +N LKI DFG++R + Y V T WYRAPE
Sbjct: 135 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPE 191
Query: 188 LLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSE 247
++L Y+ VD+WSVGCIMAELL + LF GT +DQ+ I + +GTP + +S
Sbjct: 192 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 251
Query: 248 LPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHY 307
+ N+ + + + F +P+ DLL ++L D +KRIT AL H
Sbjct: 252 --ESARNYIQSLTQMPKMNFANVFIGANPL----AVDLLEKMLVLDSDKRITAAQALAHA 305
Query: 308 WFHEVPLPKSK 318
+F + P +
Sbjct: 306 YFAQYHDPDDE 316
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 165 bits (418), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 102/311 (32%), Positives = 163/311 (52%), Gaps = 22/311 (7%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
++ L+ + G YG V A D K+G VA+KK+ R + + + RE+ +L
Sbjct: 30 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL----SRPFQSIIHA--KRTYRELRLLKH 83
Query: 73 FDHPSIVNVKEVV-----MDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLL 127
H +++ + +V +++ + VY+V M DL +++ Q + V+ L+ Q+L
Sbjct: 84 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHVQFLIYQIL 141
Query: 128 EGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPE 187
G+KY+H ++HRDLK SNL +N LKI DFG++R + Y V T WYRAPE
Sbjct: 142 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPE 198
Query: 188 LLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSE 247
++L Y+ VD+WSVGCIMAELL + LF GT +DQ+ I + +GTP + +S
Sbjct: 199 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 258
Query: 248 LPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHY 307
+ N+ + + + F +P+ DLL ++L D +KRIT AL H
Sbjct: 259 --ESARNYIQSLTQMPKMNFANVFIGANPL----AVDLLEKMLVLDSDKRITAAQALAHA 312
Query: 308 WFHEVPLPKSK 318
+F + P +
Sbjct: 313 YFAQYHDPDDE 323
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 165 bits (418), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 102/311 (32%), Positives = 163/311 (52%), Gaps = 22/311 (7%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
++ L+ + G YG V A D K+G VA+KK+ R + + + RE+ +L
Sbjct: 29 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL----SRPFQSIIHA--KRTYRELRLLKH 82
Query: 73 FDHPSIVNVKEVV-----MDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLL 127
H +++ + +V +++ + VY+V M DL +++ Q + V+ L+ Q+L
Sbjct: 83 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHVQFLIYQIL 140
Query: 128 EGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPE 187
G+KY+H ++HRDLK SNL +N LKI DFG++R + Y V T WYRAPE
Sbjct: 141 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPE 197
Query: 188 LLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSE 247
++L Y+ VD+WSVGCIMAELL + LF GT +DQ+ I + +GTP + +S
Sbjct: 198 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 257
Query: 248 LPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHY 307
+ N+ + + + F +P+ DLL ++L D +KRIT AL H
Sbjct: 258 --ESARNYIQSLTQMPKMNFANVFIGANPL----AVDLLEKMLVLDSDKRITAAQALAHA 311
Query: 308 WFHEVPLPKSK 318
+F + P +
Sbjct: 312 YFAQYHDPDDE 322
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 165 bits (418), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 102/311 (32%), Positives = 163/311 (52%), Gaps = 22/311 (7%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
++ L+ + G YG V A D K+G VA+KK+ R + + + RE+ +L
Sbjct: 26 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL----SRPFQSIIHA--KRTYRELRLLKH 79
Query: 73 FDHPSIVNVKEVV-----MDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLL 127
H +++ + +V +++ + VY+V M DL +++ K + V+ L+ Q+L
Sbjct: 80 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQIL 137
Query: 128 EGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPE 187
G+KY+H ++HRDLK SNL +N LKI DFG++R + Y V T WYRAPE
Sbjct: 138 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPE 194
Query: 188 LLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSE 247
++L Y+ VD+WSVGCIMAELL + LF GT +DQ+ I + +GTP + +S
Sbjct: 195 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 254
Query: 248 LPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHY 307
+ N+ + + + F +P+ DLL ++L D +KRIT AL H
Sbjct: 255 --ESARNYIQSLTQMPKMNFANVFIGANPL----AVDLLEKMLVLDSDKRITAAQALAHA 308
Query: 308 WFHEVPLPKSK 318
+F + P +
Sbjct: 309 YFAQYHDPDDE 319
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 165 bits (418), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 102/311 (32%), Positives = 163/311 (52%), Gaps = 22/311 (7%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
++ L+ + G YG V A D K+G VA+KK+ R + + + RE+ +L
Sbjct: 36 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL----SRPFQSIIHA--KRTYRELRLLKH 89
Query: 73 FDHPSIVNVKEVV-----MDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLL 127
H +++ + +V +++ + VY+V M DL +++ Q + V+ L+ Q+L
Sbjct: 90 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHVQFLIYQIL 147
Query: 128 EGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPE 187
G+KY+H ++HRDLK SNL +N LKI DFG++R + Y V T WYRAPE
Sbjct: 148 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPE 204
Query: 188 LLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSE 247
++L Y+ VD+WSVGCIMAELL + LF GT +DQ+ I + +GTP + +S
Sbjct: 205 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 264
Query: 248 LPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHY 307
+ N+ + + + F +P+ DLL ++L D +KRIT AL H
Sbjct: 265 --ESARNYIQSLTQMPKMNFANVFIGANPL----AVDLLEKMLVLDSDKRITAAQALAHA 318
Query: 308 WFHEVPLPKSK 318
+F + P +
Sbjct: 319 YFAQYHDPDDE 329
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 165 bits (418), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 102/311 (32%), Positives = 163/311 (52%), Gaps = 22/311 (7%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
++ L+ + G YG V A D K+G VA+KK+ R + + + RE+ +L
Sbjct: 36 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL----SRPFQSIIHA--KRTYRELRLLKH 89
Query: 73 FDHPSIVNVKEVV-----MDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLL 127
H +++ + +V +++ + VY+V M DL +++ Q + V+ L+ Q+L
Sbjct: 90 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHVQFLIYQIL 147
Query: 128 EGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPE 187
G+KY+H ++HRDLK SNL +N LKI DFG++R + Y V T WYRAPE
Sbjct: 148 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPE 204
Query: 188 LLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSE 247
++L Y+ VD+WSVGCIMAELL + LF GT +DQ+ I + +GTP + +S
Sbjct: 205 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 264
Query: 248 LPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHY 307
+ N+ + + + F +P+ DLL ++L D +KRIT AL H
Sbjct: 265 --ESARNYIQSLTQMPKMNFANVFIGANPL----AVDLLEKMLVLDSDKRITAAQALAHA 318
Query: 308 WFHEVPLPKSK 318
+F + P +
Sbjct: 319 YFAQYHDPDDE 329
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 165 bits (418), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 102/311 (32%), Positives = 163/311 (52%), Gaps = 22/311 (7%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
++ L+ + G YG V A D K+G VA+KK+ R + + + RE+ +L
Sbjct: 26 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL----SRPFQSIIHA--KRTYRELRLLKH 79
Query: 73 FDHPSIVNVKEVV-----MDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLL 127
H +++ + +V +++ + VY+V M DL +++ Q + V+ L+ Q+L
Sbjct: 80 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHVQFLIYQIL 137
Query: 128 EGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPE 187
G+KY+H ++HRDLK SNL +N LKI DFG++R + Y V T WYRAPE
Sbjct: 138 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPE 194
Query: 188 LLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSE 247
++L Y+ VD+WSVGCIMAELL + LF GT +DQ+ I + +GTP + +S
Sbjct: 195 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 254
Query: 248 LPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHY 307
+ N+ + + + F +P+ DLL ++L D +KRIT AL H
Sbjct: 255 --ESARNYIQSLTQMPKMNFANVFIGANPL----AVDLLEKMLVLDSDKRITAAQALAHA 308
Query: 308 WFHEVPLPKSK 318
+F + P +
Sbjct: 309 YFAQYHDPDDE 319
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 165 bits (418), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 102/311 (32%), Positives = 163/311 (52%), Gaps = 22/311 (7%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
++ L+ + G YG V A D K+G VA+KK+ R + + + RE+ +L
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL----SRPFQSIIHA--KRTYRELRLLKH 77
Query: 73 FDHPSIVNVKEVV-----MDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLL 127
H +++ + +V +++ + VY+V M DL +++ Q + V+ L+ Q+L
Sbjct: 78 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHVQFLIYQIL 135
Query: 128 EGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPE 187
G+KY+H ++HRDLK SNL +N LKI DFG++R + T V T WYRAPE
Sbjct: 136 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---TGXVATRWYRAPE 192
Query: 188 LLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSE 247
++L Y+ VD+WSVGCIMAELL + LF GT +DQ+ I + +GTP + +S
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 252
Query: 248 LPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHY 307
+ N+ + + + F +P+ DLL ++L D +KRIT AL H
Sbjct: 253 --ESARNYIQSLTQMPKMNFANVFIGANPL----AVDLLEKMLVLDSDKRITAAQALAHA 306
Query: 308 WFHEVPLPKSK 318
+F + P +
Sbjct: 307 YFAQYHDPDDE 317
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 165 bits (418), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 102/311 (32%), Positives = 163/311 (52%), Gaps = 22/311 (7%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
++ L+ + G YG V A D K+G VA+KK+ R + + + RE+ +L
Sbjct: 35 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL----SRPFQSIIHA--KRTYRELRLLKH 88
Query: 73 FDHPSIVNVKEVV-----MDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLL 127
H +++ + +V +++ + VY+V M DL +++ Q + V+ L+ Q+L
Sbjct: 89 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHVQFLIYQIL 146
Query: 128 EGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPE 187
G+KY+H ++HRDLK SNL +N LKI DFG++R + Y V T WYRAPE
Sbjct: 147 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPE 203
Query: 188 LLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSE 247
++L Y+ VD+WSVGCIMAELL + LF GT +DQ+ I + +GTP + +S
Sbjct: 204 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 263
Query: 248 LPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHY 307
+ N+ + + + F +P+ DLL ++L D +KRIT AL H
Sbjct: 264 --ESARNYIQSLTQMPKMNFANVFIGANPL----AVDLLEKMLVLDSDKRITAAQALAHA 317
Query: 308 WFHEVPLPKSK 318
+F + P +
Sbjct: 318 YFAQYHDPDDE 328
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 165 bits (418), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 102/311 (32%), Positives = 163/311 (52%), Gaps = 22/311 (7%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
++ L+ + G YG V A D K+G VA+KK+ R + + + RE+ +L
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL----SRPFQSIIHA--KRTYRELRLLKH 77
Query: 73 FDHPSIVNVKEVV-----MDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLL 127
H +++ + +V +++ + VY+V M DL +++ K + V+ L+ Q+L
Sbjct: 78 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQIL 135
Query: 128 EGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPE 187
G+KY+H ++HRDLK SNL +N LKI DFG++R + Y V T WYRAPE
Sbjct: 136 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPE 192
Query: 188 LLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSE 247
++L Y+ VD+WSVGCIMAELL + LF GT +DQ+ I + +GTP + +S
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 252
Query: 248 LPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHY 307
+ N+ + + + F +P+ DLL ++L D +KRIT AL H
Sbjct: 253 --ESARNYIQSLTQMPKMNFANVFIGANPL----AVDLLEKMLVLDSDKRITAAQALAHA 306
Query: 308 WFHEVPLPKSK 318
+F + P +
Sbjct: 307 YFAQYHDPDDE 317
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 165 bits (418), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 101/311 (32%), Positives = 162/311 (52%), Gaps = 22/311 (7%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
++ L+ + G YG V A D K+G VA+KK+ R + + + RE+ +L
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKL----SRPFQSIIHA--KRTYRELRLLKH 77
Query: 73 FDHPSIVNVKEVV-----MDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLL 127
H +++ + +V +++ + VY+V M DL +++ Q + V+ L+ Q+L
Sbjct: 78 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHVQFLIYQIL 135
Query: 128 EGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPE 187
G+KY+H ++HRDLK SNL +N LKI DFG++R + V T WYRAPE
Sbjct: 136 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---AGFVATRWYRAPE 192
Query: 188 LLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSE 247
++L Y+ VD+WSVGCIMAELL + LF GT +DQ+ I + +GTP + +S
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 252
Query: 248 LPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHY 307
+ N+ + + + F +P+ DLL ++L D +KRIT AL H
Sbjct: 253 --ESARNYIQSLAQMPKMNFANVFIGANPL----AVDLLEKMLVLDSDKRITAAQALAHA 306
Query: 308 WFHEVPLPKSK 318
+F + P +
Sbjct: 307 YFAQYHDPDDE 317
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 165 bits (418), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 101/311 (32%), Positives = 162/311 (52%), Gaps = 22/311 (7%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
++ L+ + G YG V A D K+G VA+KK+ R + + + RE+ +L
Sbjct: 20 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKL----SRPFQSIIHA--KRTYRELRLLKH 73
Query: 73 FDHPSIVNVKEVV-----MDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLL 127
H +++ + +V +++ + VY+V M DL +++ Q + V+ L+ Q+L
Sbjct: 74 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHVQFLIYQIL 131
Query: 128 EGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPE 187
G+KY+H ++HRDLK SNL +N LKI DFG++R + V T WYRAPE
Sbjct: 132 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---AGFVATRWYRAPE 188
Query: 188 LLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSE 247
++L Y+ VD+WSVGCIMAELL + LF GT +DQ+ I + +GTP + +S
Sbjct: 189 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 248
Query: 248 LPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHY 307
+ N+ + + + F +P+ DLL ++L D +KRIT AL H
Sbjct: 249 --ESARNYIQSLAQMPKMNFANVFIGANPL----AVDLLEKMLVLDSDKRITAAQALAHA 302
Query: 308 WFHEVPLPKSK 318
+F + P +
Sbjct: 303 YFAQYHDPDDE 313
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 165 bits (418), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 102/311 (32%), Positives = 163/311 (52%), Gaps = 22/311 (7%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
++ L+ + G YG V A D K+G VA+KK+ R + + + RE+ +L
Sbjct: 20 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL----SRPFQSIIHA--KRTYRELRLLKH 73
Query: 73 FDHPSIVNVKEVV-----MDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLL 127
H +++ + +V +++ + VY+V M DL +++ Q + V+ L+ Q+L
Sbjct: 74 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHVQFLIYQIL 131
Query: 128 EGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPE 187
G+KY+H ++HRDLK SNL +N LKI DFG++R + Y V T WYRAPE
Sbjct: 132 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPE 188
Query: 188 LLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSE 247
++L Y+ VD+WSVGCIMAELL + LF GT +DQ+ I + +GTP + +S
Sbjct: 189 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 248
Query: 248 LPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHY 307
+ N+ + + + F +P+ DLL ++L D +KRIT AL H
Sbjct: 249 --ESARNYIQSLTQMPKMNFANVFIGANPL----AVDLLEKMLVLDSDKRITAAQALAHA 302
Query: 308 WFHEVPLPKSK 318
+F + P +
Sbjct: 303 YFAQYHDPDDE 313
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 165 bits (418), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 121/366 (33%), Positives = 176/366 (48%), Gaps = 83/366 (22%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
+E + I G+YG V A DK +VA+KK+ DC LREI IL
Sbjct: 55 YEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRI------LREIAILNR 108
Query: 73 FDHPSIVNVKEVVM----DDHDSVYMVMEYMEHDLKWLMESMKQPFSTSE--VKCLMLQL 126
+H +V V ++V+ + D +Y+V+E + D K L + P +E +K L+ L
Sbjct: 109 LNHDHVVKVLDIVIPKDVEKFDELYVVLEIADSDFKKLF---RTPVYLTELHIKTLLYNL 165
Query: 127 LEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSR-----QYGS---PLKP----- 173
L GVKY+H +LHRDLK +N L+N +K+CDFG++R + G+ P+ P
Sbjct: 166 LVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDM 225
Query: 174 --------------YTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA------ 213
T VVT WYRAPEL+L + Y+ A+D+WS+GCI AELL
Sbjct: 226 NLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENV 285
Query: 214 -----KKPLFSGTT--------------------EVDQIDKIFKTLGTPTETIWPGLSEL 248
+ PLF G++ DQ++ IF LGTP+E L +
Sbjct: 286 AYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKE 345
Query: 249 PGAK--ANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNH 306
+ F K+ L +RFPA+ S LL R+L ++P KRIT+++ L H
Sbjct: 346 DAKRYIRIFPKREGTDLAERFPAS--------SADAIHLLKRMLVFNPNKRITINECLAH 397
Query: 307 YWFHEV 312
+F EV
Sbjct: 398 PFFKEV 403
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 165 bits (418), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 102/311 (32%), Positives = 163/311 (52%), Gaps = 22/311 (7%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
++ L+ + G YG V A D K+G VA+KK+ R + + + RE+ +L
Sbjct: 22 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL----SRPFQSIIHA--KRTYRELRLLKH 75
Query: 73 FDHPSIVNVKEVV-----MDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLL 127
H +++ + +V +++ + VY+V M DL +++ Q + V+ L+ Q+L
Sbjct: 76 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHVQFLIYQIL 133
Query: 128 EGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPE 187
G+KY+H ++HRDLK SNL +N LKI DFG++R + Y V T WYRAPE
Sbjct: 134 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPE 190
Query: 188 LLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSE 247
++L Y+ VD+WSVGCIMAELL + LF GT +DQ+ I + +GTP + +S
Sbjct: 191 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 250
Query: 248 LPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHY 307
+ N+ + + + F +P+ DLL ++L D +KRIT AL H
Sbjct: 251 --ESARNYIQSLTQMPKMNFANVFIGANPL----AVDLLEKMLVLDSDKRITAAQALAHA 304
Query: 308 WFHEVPLPKSK 318
+F + P +
Sbjct: 305 YFAQYHDPDDE 315
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 165 bits (418), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 105/311 (33%), Positives = 166/311 (53%), Gaps = 22/311 (7%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
++ L+ + G YG V A D K+G VA+KK+ R + + + RE+ +L
Sbjct: 47 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL----SRPFQSIIHA--KRTYRELRLLKH 100
Query: 73 FDHPSIVNVKEVV-----MDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLL 127
H +++ + +V +++ + VY+V M DL +++ Q + V+ L+ Q+L
Sbjct: 101 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHVQFLIYQIL 158
Query: 128 EGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPE 187
G+KY+H ++HRDLK SNL +N LKI DFG++R + Y V T WYRAPE
Sbjct: 159 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPE 215
Query: 188 LLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSE 247
++L Y+ VD+WSVGCIMAELL + LF GT +DQ+ I + +GTP + +S
Sbjct: 216 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 275
Query: 248 LPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHY 307
+ N+ + + + F A F G+ L+ DLL ++L D +KRIT AL H
Sbjct: 276 --ESARNYIQSLTQMPKMNF-ANVFIGANPLA---VDLLEKMLVLDSDKRITAAQALAHA 329
Query: 308 WFHEVPLPKSK 318
+F + P +
Sbjct: 330 YFAQYHDPDDE 340
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 165 bits (418), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 101/311 (32%), Positives = 162/311 (52%), Gaps = 22/311 (7%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
++ L+ + G YG V A D K+G VA+KK+ R + + + RE+ +L
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKL----SRPFQSIIHA--KRTYRELRLLKH 77
Query: 73 FDHPSIVNVKEVV-----MDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLL 127
H +++ + +V +++ + VY+V M DL +++ Q + V+ L+ Q+L
Sbjct: 78 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHVQFLIYQIL 135
Query: 128 EGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPE 187
G+KY+H ++HRDLK SNL +N LKI DFG++R + V T WYRAPE
Sbjct: 136 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---AGFVATRWYRAPE 192
Query: 188 LLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSE 247
++L Y+ VD+WSVGCIMAELL + LF GT +DQ+ I + +GTP + +S
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 252
Query: 248 LPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHY 307
+ N+ + + + F +P+ DLL ++L D +KRIT AL H
Sbjct: 253 --ESARNYIQSLTQMPKMNFANVFIGANPL----AVDLLEKMLVLDSDKRITAAQALAHA 306
Query: 308 WFHEVPLPKSK 318
+F + P +
Sbjct: 307 YFAQYHDPDDE 317
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 165 bits (418), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 102/311 (32%), Positives = 163/311 (52%), Gaps = 22/311 (7%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
++ L+ + G YG V A D K+G VA+KK+ R + + + RE+ +L
Sbjct: 21 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL----SRPFQSIIHA--KRTYRELRLLKH 74
Query: 73 FDHPSIVNVKEVV-----MDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLL 127
H +++ + +V +++ + VY+V M DL +++ Q + V+ L+ Q+L
Sbjct: 75 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHVQFLIYQIL 132
Query: 128 EGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPE 187
G+KY+H ++HRDLK SNL +N LKI DFG++R + Y V T WYRAPE
Sbjct: 133 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPE 189
Query: 188 LLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSE 247
++L Y+ VD+WSVGCIMAELL + LF GT +DQ+ I + +GTP + +S
Sbjct: 190 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 249
Query: 248 LPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHY 307
+ N+ + + + F +P+ DLL ++L D +KRIT AL H
Sbjct: 250 --ESARNYIQSLTQMPKMNFANVFIGANPL----AVDLLEKMLVLDSDKRITAAQALAHA 303
Query: 308 WFHEVPLPKSK 318
+F + P +
Sbjct: 304 YFAQYHDPDDE 314
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 165 bits (417), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 103/318 (32%), Positives = 162/318 (50%), Gaps = 36/318 (11%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSL-------R 65
++ L+ + G YG V A D K+G VA+KK+ P S+ R
Sbjct: 36 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSK-------------PFQSIIHAKRTYR 82
Query: 66 EINILLSFDHPSIVNVKEVV-----MDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVK 120
E+ +L H +++ + +V +++ + VY+V M DL +++ Q + V+
Sbjct: 83 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHVQ 140
Query: 121 CLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVT 180
L+ Q+L G+KY+H ++HRDLK SNL +N LKI DFG++R + Y V T
Sbjct: 141 FLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VAT 197
Query: 181 LWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTET 240
WYRAPE++L Y+ VD+WSVGCIMAELL + LF GT +DQ+ I + +GTP
Sbjct: 198 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 257
Query: 241 IWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITV 300
+ +S + N+ + + + F +P+ DLL ++L D +KRIT
Sbjct: 258 LLKKISS--ESARNYIQSLTQMPKMNFANVFIGANPL----AVDLLEKMLVLDSDKRITA 311
Query: 301 DDALNHYWFHEVPLPKSK 318
AL H +F + P +
Sbjct: 312 AQALAHAYFAQYHDPDDE 329
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 164 bits (416), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 104/311 (33%), Positives = 165/311 (53%), Gaps = 22/311 (7%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
++ L+ + G YG V A D K+G VA+KK+ R + + + RE+ +L
Sbjct: 44 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKL----SRPFQSIIHA--KRTYRELRLLKH 97
Query: 73 FDHPSIVNVKEVV-----MDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLL 127
H +++ + +V +++ + VY+V M DL +++ K + V+ L+ Q+L
Sbjct: 98 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQIL 155
Query: 128 EGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPE 187
G+KY+H ++HRDLK SNL +N LKI DFG++R + V T WYRAPE
Sbjct: 156 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---XGXVATRWYRAPE 212
Query: 188 LLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSE 247
++L Y+ VD+WSVGCIMAELL + LF GT +DQ+ I + +GTP + +S
Sbjct: 213 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 272
Query: 248 LPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHY 307
+ N+ + + + F A F G+ L+ DLL ++L D +KRIT AL H
Sbjct: 273 --ESARNYIQSLAQMPKMNF-ANVFIGANPLA---VDLLEKMLVLDSDKRITAAQALAHA 326
Query: 308 WFHEVPLPKSK 318
+F + P +
Sbjct: 327 YFAQYHDPDDE 337
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 164 bits (415), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 101/311 (32%), Positives = 163/311 (52%), Gaps = 22/311 (7%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
++ L+ + G YG V A D K+G VA+KK+ R + + + RE+ +L
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL----SRPFQSIIHA--KRTYRELRLLKH 77
Query: 73 FDHPSIVNVKEVV-----MDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLL 127
H +++ + +V +++ + VY+V M DL +++ Q + V+ L+ Q+L
Sbjct: 78 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHVQFLIYQIL 135
Query: 128 EGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPE 187
G+KY+H ++HRDLK SNL +N LKI D+G++R + Y V T WYRAPE
Sbjct: 136 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDYGLARHTDDEMTGY---VATRWYRAPE 192
Query: 188 LLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSE 247
++L Y+ VD+WSVGCIMAELL + LF GT +DQ+ I + +GTP + +S
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 252
Query: 248 LPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHY 307
+ N+ + + + F +P+ DLL ++L D +KRIT AL H
Sbjct: 253 --ESARNYIQSLTQMPKMNFANVFIGANPL----AVDLLEKMLVLDSDKRITAAQALAHA 306
Query: 308 WFHEVPLPKSK 318
+F + P +
Sbjct: 307 YFAQYHDPDDE 317
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 164 bits (414), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 117/361 (32%), Positives = 177/361 (49%), Gaps = 77/361 (21%)
Query: 19 ISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSI 78
I G+YG VY A DK + + VA+KKV DC LREI IL I
Sbjct: 34 IGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRI------LREITILNRLKSDYI 87
Query: 79 VNVKEVVMDDH----DSVYMVMEYMEHDLKWLMESMKQPFSTSE--VKCLMLQLLEGVKY 132
+ + ++++ D D +Y+V+E + DLK L K P +E +K ++ LL G +
Sbjct: 88 IRLYDLIIPDDLLKFDELYIVLEIADSDLKKLF---KTPIFLTEEHIKTILYNLLLGENF 144
Query: 133 LHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPL--------------------- 171
+H++ ++HRDLK +N LLN +K+CDFG++R S
Sbjct: 145 IHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNL 204
Query: 172 -KPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELL-----------AKKPLFS 219
K TS VVT WYRAPEL+L + Y+ ++D+WS GCI AELL + PLF
Sbjct: 205 KKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPLFP 264
Query: 220 GT-----------------TEVDQIDKIFKTLGTPTETIWPGLSE---LPGAKANFAKQP 259
G+ + DQ++ IF +GTPTE +++ + K ++P
Sbjct: 265 GSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKP 324
Query: 260 YNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVPLPKSKD 319
NL +K P +S+ G +LL +L ++P KRIT+D AL+H + +V K ++
Sbjct: 325 INLKQK---------YPSISDDGINLLESMLKFNPNKRITIDQALDHPYLKDVRKKKLEN 375
Query: 320 F 320
F
Sbjct: 376 F 376
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 163 bits (412), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 100/298 (33%), Positives = 159/298 (53%), Gaps = 14/298 (4%)
Query: 19 ISEGTYGIVYRARDKKSGEIVALKKVKMNV--GRKEDCLEYGFPISS-LREINILLSFDH 75
IS G+YG V D + G VA+K+V V GR + L F LREI +L F H
Sbjct: 30 ISSGSYGAVCAGVDSE-GIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHH 88
Query: 76 PSIVNVKEVVMDDHD----SVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVK 131
P+I+ ++++ + + +Y+V E M DL ++ + S ++ M +L G+
Sbjct: 89 PNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGLH 148
Query: 132 YLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLG 191
LH+ V+HRDL N+LL + + ICDF ++R+ + T V WYRAPEL++
Sbjct: 149 VLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANK-THYVTHRWYRAPELVMQ 207
Query: 192 AKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGA 251
K ++ VDMWS GC+MAE+ +K LF G+T +Q++KI + +GTP S P A
Sbjct: 208 FKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSS-PSA 266
Query: 252 KANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWF 309
+ N+ + + A T PV DL+ ++L ++P++RI+ + AL H +F
Sbjct: 267 RDYLRNSLSNVPARAWTAVVPTADPV----ALDLIAKMLEFNPQRRISTEQALRHPYF 320
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 163 bits (412), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 100/298 (33%), Positives = 159/298 (53%), Gaps = 14/298 (4%)
Query: 19 ISEGTYGIVYRARDKKSGEIVALKKVKMNV--GRKEDCLEYGFPISS-LREINILLSFDH 75
IS G+YG V D + G VA+K+V V GR + L F LREI +L F H
Sbjct: 30 ISSGSYGAVCAGVDSE-GIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHH 88
Query: 76 PSIVNVKEVVMDDHD----SVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVK 131
P+I+ ++++ + + +Y+V E M DL ++ + S ++ M +L G+
Sbjct: 89 PNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGLH 148
Query: 132 YLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLG 191
LH+ V+HRDL N+LL + + ICDF ++R+ + T V WYRAPEL++
Sbjct: 149 VLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANK-THYVTHRWYRAPELVMQ 207
Query: 192 AKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGA 251
K ++ VDMWS GC+MAE+ +K LF G+T +Q++KI + +GTP S P A
Sbjct: 208 FKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSS-PSA 266
Query: 252 KANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWF 309
+ N+ + + A T PV DL+ ++L ++P++RI+ + AL H +F
Sbjct: 267 RDYLRNSLSNVPARAWTAVVPTADPV----ALDLIAKMLEFNPQRRISTEQALRHPYF 320
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 163 bits (412), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 101/311 (32%), Positives = 162/311 (52%), Gaps = 22/311 (7%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
++ L+ + G YG V A D K+G VA+KK+ R + + + RE+ +L
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKL----SRPFQSIIHA--KRTYRELRLLKH 77
Query: 73 FDHPSIVNVKEVV-----MDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLL 127
H +++ + +V +++ + VY+V M DL +++ Q + V+ L+ Q+L
Sbjct: 78 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHVQFLIYQIL 135
Query: 128 EGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPE 187
G+KY+H ++HRDLK SNL +N LKI DF ++R + Y V T WYRAPE
Sbjct: 136 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFYLARHTDDEMTGY---VATRWYRAPE 192
Query: 188 LLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSE 247
++L Y+ VD+WSVGCIMAELL + LF GT +DQ+ I + +GTP + +S
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 252
Query: 248 LPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHY 307
+ N+ + + + F +P+ DLL ++L D +KRIT AL H
Sbjct: 253 --ESARNYIQSLTQMPKMNFANVFIGANPL----AVDLLEKMLVLDSDKRITAAQALAHA 306
Query: 308 WFHEVPLPKSK 318
+F + P +
Sbjct: 307 YFAQYHDPDDE 317
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 162 bits (411), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 108/320 (33%), Positives = 163/320 (50%), Gaps = 45/320 (14%)
Query: 19 ISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSI 78
I G++G+VY+A+ SGE+VA+KKV K RE+ I+ DH +I
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKN------------RELQIMRKLDHCNI 75
Query: 79 VNVKEVVM---DDHDSVYM--VMEYMEHDLKWLME---SMKQPFSTSEVKCLMLQLLEGV 130
V ++ + D VY+ V++Y+ + + KQ VK M QL +
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 135
Query: 131 KYLHDNWVLHRDLKTSNLLLN-NQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELL 189
Y+H + HRD+K NLLL+ + VLK+CDFG ++Q +P S + + +YRAPEL+
Sbjct: 136 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSYICSRYYRAPELI 194
Query: 190 LGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPT----ETIWPGL 245
GA Y++++D+WS GC++AELL +P+F G + VDQ+ +I K LGTPT + P
Sbjct: 195 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNY 254
Query: 246 SELPGAKANFAKQPYN-LLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDAL 304
+E A P+ + R R P + L +RLL Y P R+T +A
Sbjct: 255 TEF--AFPQIKAHPWTKVFRPRTPPEAIA-----------LCSRLLEYTPTARLTPLEAC 301
Query: 305 NHYWFHE-----VPLPKSKD 319
H +F E V LP +D
Sbjct: 302 AHSFFDELRDPNVKLPNGRD 321
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 162 bits (411), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 101/311 (32%), Positives = 162/311 (52%), Gaps = 22/311 (7%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
++ L+ + G YG V A D K+G VA+KK+ R + + + RE+ +L
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL----SRPFQSIIHA--KRTYRELRLLKH 77
Query: 73 FDHPSIVNVKEVV-----MDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLL 127
H +++ + +V +++ + VY+V M DL +++ Q + V+ L+ Q+L
Sbjct: 78 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHVQFLIYQIL 135
Query: 128 EGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPE 187
G+KY+H ++HRDLK SNL +N LKI FG++R + Y V T WYRAPE
Sbjct: 136 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILGFGLARHTDDEMTGY---VATRWYRAPE 192
Query: 188 LLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSE 247
++L Y+ VD+WSVGCIMAELL + LF GT +DQ+ I + +GTP + +S
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 252
Query: 248 LPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHY 307
+ N+ + + + F +P+ DLL ++L D +KRIT AL H
Sbjct: 253 --ESARNYIQSLTQMPKMNFANVFIGANPL----AVDLLEKMLVLDSDKRITAAQALAHA 306
Query: 308 WFHEVPLPKSK 318
+F + P +
Sbjct: 307 YFAQYHDPDDE 317
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 162 bits (411), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 110/322 (34%), Positives = 166/322 (51%), Gaps = 49/322 (15%)
Query: 19 ISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSI 78
I G++G+VY+A+ SGE+VA+KKV K RE+ I+ DH +I
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKN------------RELQIMRKLDHCNI 75
Query: 79 VNVKEVVM---DDHDSVYM--VMEYMEHDLKWLME---SMKQPFSTSEVKCLMLQLLEGV 130
V ++ + D VY+ V++Y+ + + KQ VK M QL +
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 135
Query: 131 KYLHDNWVLHRDLKTSNLLLN-NQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELL 189
Y+H + HRD+K NLLL+ + VLK+CDFG ++Q +P S + + +YRAPEL+
Sbjct: 136 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSYICSRYYRAPELI 194
Query: 190 LGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPT----ETIWPGL 245
GA Y++++D+WS GC++AELL +P+F G + VDQ+ +I K LGTPT + P
Sbjct: 195 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNY 254
Query: 246 SE--LPGAKANFAKQPYN-LLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDD 302
+E P KA+ P+ + R R P + L +RLL Y P R+T +
Sbjct: 255 TEFKFPQIKAH----PWTKVFRPRTPPEAIA-----------LCSRLLEYTPTARLTPLE 299
Query: 303 ALNHYWFHE-----VPLPKSKD 319
A H +F E V LP +D
Sbjct: 300 ACAHSFFDELRDPNVKLPNGRD 321
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 162 bits (411), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 108/320 (33%), Positives = 163/320 (50%), Gaps = 45/320 (14%)
Query: 19 ISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSI 78
I G++G+VY+A+ SGE+VA+KKV K RE+ I+ DH +I
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKN------------RELQIMRKLDHCNI 75
Query: 79 VNVKEVVM---DDHDSVYM--VMEYMEHDLKWLME---SMKQPFSTSEVKCLMLQLLEGV 130
V ++ + D VY+ V++Y+ + + KQ VK M QL +
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 135
Query: 131 KYLHDNWVLHRDLKTSNLLLN-NQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELL 189
Y+H + HRD+K NLLL+ + VLK+CDFG ++Q +P S + + +YRAPEL+
Sbjct: 136 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSXICSRYYRAPELI 194
Query: 190 LGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPT----ETIWPGL 245
GA Y++++D+WS GC++AELL +P+F G + VDQ+ +I K LGTPT + P
Sbjct: 195 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNY 254
Query: 246 SELPGAKANFAKQPYN-LLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDAL 304
+E A P+ + R R P + L +RLL Y P R+T +A
Sbjct: 255 TEF--AFPQIKAHPWTKVFRPRTPPEAIA-----------LCSRLLEYTPTARLTPLEAC 301
Query: 305 NHYWFHE-----VPLPKSKD 319
H +F E V LP +D
Sbjct: 302 AHSFFDELRDPNVKLPNGRD 321
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 162 bits (410), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 110/322 (34%), Positives = 167/322 (51%), Gaps = 49/322 (15%)
Query: 19 ISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSI 78
I G++G+VY+A+ SGE+VA+KKV + K RE+ I+ DH +I
Sbjct: 64 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------------RELQIMRKLDHCNI 111
Query: 79 VNVKEVVM---DDHDSVYM--VMEYMEHDLKWLME---SMKQPFSTSEVKCLMLQLLEGV 130
V ++ + D VY+ V++Y+ + + KQ VK M QL +
Sbjct: 112 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 171
Query: 131 KYLHDNWVLHRDLKTSNLLLN-NQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELL 189
Y+H + HRD+K NLLL+ + VLK+CDFG ++Q +P S + + +YRAPEL+
Sbjct: 172 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSYICSRYYRAPELI 230
Query: 190 LGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPT----ETIWPGL 245
GA Y++++D+WS GC++AELL +P+F G + VDQ+ +I K LGTPT + P
Sbjct: 231 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNY 290
Query: 246 SE--LPGAKANFAKQPYN-LLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDD 302
+E P KA+ P+ + R R P + L +RLL Y P R+T +
Sbjct: 291 TEFKFPQIKAH----PWTKVFRPRTPPEAIA-----------LCSRLLEYTPTARLTPLE 335
Query: 303 ALNHYWFHE-----VPLPKSKD 319
A H +F E V LP +D
Sbjct: 336 ACAHSFFDELRDPNVKLPNGRD 357
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 162 bits (410), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 110/322 (34%), Positives = 167/322 (51%), Gaps = 49/322 (15%)
Query: 19 ISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSI 78
I G++G+VY+A+ SGE+VA+KKV + K RE+ I+ DH +I
Sbjct: 40 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------------RELQIMRKLDHCNI 87
Query: 79 VNVKEVVM---DDHDSVYM--VMEYMEHDLKWLME---SMKQPFSTSEVKCLMLQLLEGV 130
V ++ + D VY+ V++Y+ + + KQ VK M QL +
Sbjct: 88 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 147
Query: 131 KYLHDNWVLHRDLKTSNLLLN-NQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELL 189
Y+H + HRD+K NLLL+ + VLK+CDFG ++Q +P S + + +YRAPEL+
Sbjct: 148 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSXICSRYYRAPELI 206
Query: 190 LGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPT----ETIWPGL 245
GA Y++++D+WS GC++AELL +P+F G + VDQ+ +I K LGTPT + P
Sbjct: 207 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNY 266
Query: 246 SE--LPGAKANFAKQPYN-LLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDD 302
+E P KA+ P+ + R R P + L +RLL Y P R+T +
Sbjct: 267 TEFKFPQIKAH----PWTKVFRPRTPPEAIA-----------LCSRLLEYTPTARLTPLE 311
Query: 303 ALNHYWFHE-----VPLPKSKD 319
A H +F E V LP +D
Sbjct: 312 ACAHSFFDELRDPNVKLPNGRD 333
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 162 bits (410), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 110/322 (34%), Positives = 167/322 (51%), Gaps = 49/322 (15%)
Query: 19 ISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSI 78
I G++G+VY+A+ SGE+VA+KKV + K RE+ I+ DH +I
Sbjct: 66 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------------RELQIMRKLDHCNI 113
Query: 79 VNVKEVVM---DDHDSVYM--VMEYMEHDLKWLME---SMKQPFSTSEVKCLMLQLLEGV 130
V ++ + D VY+ V++Y+ + + KQ VK M QL +
Sbjct: 114 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 173
Query: 131 KYLHDNWVLHRDLKTSNLLLN-NQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELL 189
Y+H + HRD+K NLLL+ + VLK+CDFG ++Q +P S + + +YRAPEL+
Sbjct: 174 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSYICSRYYRAPELI 232
Query: 190 LGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPT----ETIWPGL 245
GA Y++++D+WS GC++AELL +P+F G + VDQ+ +I K LGTPT + P
Sbjct: 233 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNY 292
Query: 246 SE--LPGAKANFAKQPYN-LLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDD 302
+E P KA+ P+ + R R P + L +RLL Y P R+T +
Sbjct: 293 TEFKFPQIKAH----PWTKVFRPRTPPEAIA-----------LCSRLLEYTPTARLTPLE 337
Query: 303 ALNHYWFHE-----VPLPKSKD 319
A H +F E V LP +D
Sbjct: 338 ACAHSFFDELRDPNVKLPNGRD 359
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 162 bits (410), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 110/322 (34%), Positives = 167/322 (51%), Gaps = 49/322 (15%)
Query: 19 ISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSI 78
I G++G+VY+A+ SGE+VA+KKV + K RE+ I+ DH +I
Sbjct: 62 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------------RELQIMRKLDHCNI 109
Query: 79 VNVKEVVM---DDHDSVYM--VMEYMEHDLKWLME---SMKQPFSTSEVKCLMLQLLEGV 130
V ++ + D VY+ V++Y+ + + KQ VK M QL +
Sbjct: 110 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 169
Query: 131 KYLHDNWVLHRDLKTSNLLLN-NQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELL 189
Y+H + HRD+K NLLL+ + VLK+CDFG ++Q +P S + + +YRAPEL+
Sbjct: 170 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSYICSRYYRAPELI 228
Query: 190 LGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPT----ETIWPGL 245
GA Y++++D+WS GC++AELL +P+F G + VDQ+ +I K LGTPT + P
Sbjct: 229 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNY 288
Query: 246 SE--LPGAKANFAKQPYN-LLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDD 302
+E P KA+ P+ + R R P + L +RLL Y P R+T +
Sbjct: 289 TEFKFPQIKAH----PWTKVFRPRTPPEAIA-----------LCSRLLEYTPTARLTPLE 333
Query: 303 ALNHYWFHE-----VPLPKSKD 319
A H +F E V LP +D
Sbjct: 334 ACAHSFFDELRDPNVKLPNGRD 355
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 162 bits (410), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 101/311 (32%), Positives = 162/311 (52%), Gaps = 22/311 (7%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
++ L+ + G YG V A D K+G VA+KK+ R + + + RE+ +L
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL----SRPFQSIIHA--KRTYRELRLLKH 77
Query: 73 FDHPSIVNVKEVV-----MDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLL 127
H +++ + +V +++ + VY+V M DL +++ Q + V+ L+ Q+L
Sbjct: 78 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHVQFLIYQIL 135
Query: 128 EGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPE 187
G+KY+H ++HRDLK SNL +N LKI D G++R + Y V T WYRAPE
Sbjct: 136 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDAGLARHTDDEMTGY---VATRWYRAPE 192
Query: 188 LLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSE 247
++L Y+ VD+WSVGCIMAELL + LF GT +DQ+ I + +GTP + +S
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 252
Query: 248 LPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHY 307
+ N+ + + + F +P+ DLL ++L D +KRIT AL H
Sbjct: 253 --ESARNYIQSLTQMPKMNFANVFIGANPL----AVDLLEKMLVLDSDKRITAAQALAHA 306
Query: 308 WFHEVPLPKSK 318
+F + P +
Sbjct: 307 YFAQYHDPDDE 317
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 162 bits (410), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 110/322 (34%), Positives = 167/322 (51%), Gaps = 49/322 (15%)
Query: 19 ISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSI 78
I G++G+VY+A+ SGE+VA+KKV + K RE+ I+ DH +I
Sbjct: 56 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------------RELQIMRKLDHCNI 103
Query: 79 VNVKEVVM---DDHDSVYM--VMEYMEHDLKWLME---SMKQPFSTSEVKCLMLQLLEGV 130
V ++ + D VY+ V++Y+ + + KQ VK M QL +
Sbjct: 104 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 163
Query: 131 KYLHDNWVLHRDLKTSNLLLN-NQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELL 189
Y+H + HRD+K NLLL+ + VLK+CDFG ++Q +P S + + +YRAPEL+
Sbjct: 164 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSYICSRYYRAPELI 222
Query: 190 LGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPT----ETIWPGL 245
GA Y++++D+WS GC++AELL +P+F G + VDQ+ +I K LGTPT + P
Sbjct: 223 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNY 282
Query: 246 SE--LPGAKANFAKQPYN-LLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDD 302
+E P KA+ P+ + R R P + L +RLL Y P R+T +
Sbjct: 283 TEFKFPQIKAH----PWTKVFRPRTPPEAIA-----------LCSRLLEYTPTARLTPLE 327
Query: 303 ALNHYWFHE-----VPLPKSKD 319
A H +F E V LP +D
Sbjct: 328 ACAHSFFDELRDPNVKLPNGRD 349
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 162 bits (410), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 110/322 (34%), Positives = 167/322 (51%), Gaps = 49/322 (15%)
Query: 19 ISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSI 78
I G++G+VY+A+ SGE+VA+KKV + K RE+ I+ DH +I
Sbjct: 36 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------------RELQIMRKLDHCNI 83
Query: 79 VNVKEVVM---DDHDSVYM--VMEYMEHDLKWLME---SMKQPFSTSEVKCLMLQLLEGV 130
V ++ + D VY+ V++Y+ + + KQ VK M QL +
Sbjct: 84 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 143
Query: 131 KYLHDNWVLHRDLKTSNLLLN-NQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELL 189
Y+H + HRD+K NLLL+ + VLK+CDFG ++Q +P S + + +YRAPEL+
Sbjct: 144 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSXICSRYYRAPELI 202
Query: 190 LGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPT----ETIWPGL 245
GA Y++++D+WS GC++AELL +P+F G + VDQ+ +I K LGTPT + P
Sbjct: 203 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNY 262
Query: 246 SE--LPGAKANFAKQPYN-LLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDD 302
+E P KA+ P+ + R R P + L +RLL Y P R+T +
Sbjct: 263 TEFKFPQIKAH----PWTKVFRPRTPPEAIA-----------LCSRLLEYTPTARLTPLE 307
Query: 303 ALNHYWFHE-----VPLPKSKD 319
A H +F E V LP +D
Sbjct: 308 ACAHSFFDELRDPNVKLPNGRD 329
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 162 bits (410), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 110/322 (34%), Positives = 167/322 (51%), Gaps = 49/322 (15%)
Query: 19 ISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSI 78
I G++G+VY+A+ SGE+VA+KKV + K RE+ I+ DH +I
Sbjct: 107 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------------RELQIMRKLDHCNI 154
Query: 79 VNVKEVVM---DDHDSVYM--VMEYMEHDLKWLME---SMKQPFSTSEVKCLMLQLLEGV 130
V ++ + D VY+ V++Y+ + + KQ VK M QL +
Sbjct: 155 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 214
Query: 131 KYLHDNWVLHRDLKTSNLLLN-NQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELL 189
Y+H + HRD+K NLLL+ + VLK+CDFG ++Q +P S + + +YRAPEL+
Sbjct: 215 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSYICSRYYRAPELI 273
Query: 190 LGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPT----ETIWPGL 245
GA Y++++D+WS GC++AELL +P+F G + VDQ+ +I K LGTPT + P
Sbjct: 274 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNY 333
Query: 246 SE--LPGAKANFAKQPYN-LLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDD 302
+E P KA+ P+ + R R P + L +RLL Y P R+T +
Sbjct: 334 TEFKFPQIKAH----PWTKVFRPRTPPEAIA-----------LCSRLLEYTPTARLTPLE 378
Query: 303 ALNHYWFHE-----VPLPKSKD 319
A H +F E V LP +D
Sbjct: 379 ACAHSFFDELRDPNVKLPNGRD 400
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 162 bits (410), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 110/322 (34%), Positives = 167/322 (51%), Gaps = 49/322 (15%)
Query: 19 ISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSI 78
I G++G+VY+A+ SGE+VA+KKV + K RE+ I+ DH +I
Sbjct: 33 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------------RELQIMRKLDHCNI 80
Query: 79 VNVKEVVM---DDHDSVYM--VMEYMEHDLKWLME---SMKQPFSTSEVKCLMLQLLEGV 130
V ++ + D VY+ V++Y+ + + KQ VK M QL +
Sbjct: 81 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 140
Query: 131 KYLHDNWVLHRDLKTSNLLLN-NQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELL 189
Y+H + HRD+K NLLL+ + VLK+CDFG ++Q +P S + + +YRAPEL+
Sbjct: 141 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSYICSRYYRAPELI 199
Query: 190 LGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPT----ETIWPGL 245
GA Y++++D+WS GC++AELL +P+F G + VDQ+ +I K LGTPT + P
Sbjct: 200 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNY 259
Query: 246 SE--LPGAKANFAKQPYN-LLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDD 302
+E P KA+ P+ + R R P + L +RLL Y P R+T +
Sbjct: 260 TEFKFPQIKAH----PWTKVFRPRTPPEAIA-----------LCSRLLEYTPTARLTPLE 304
Query: 303 ALNHYWFHE-----VPLPKSKD 319
A H +F E V LP +D
Sbjct: 305 ACAHSFFDELRDPNVKLPNGRD 326
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 162 bits (410), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 110/322 (34%), Positives = 167/322 (51%), Gaps = 49/322 (15%)
Query: 19 ISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSI 78
I G++G+VY+A+ SGE+VA+KKV + K RE+ I+ DH +I
Sbjct: 47 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------------RELQIMRKLDHCNI 94
Query: 79 VNVKEVVM---DDHDSVYM--VMEYMEHDLKWLME---SMKQPFSTSEVKCLMLQLLEGV 130
V ++ + D VY+ V++Y+ + + KQ VK M QL +
Sbjct: 95 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 154
Query: 131 KYLHDNWVLHRDLKTSNLLLN-NQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELL 189
Y+H + HRD+K NLLL+ + VLK+CDFG ++Q +P S + + +YRAPEL+
Sbjct: 155 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSXICSRYYRAPELI 213
Query: 190 LGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPT----ETIWPGL 245
GA Y++++D+WS GC++AELL +P+F G + VDQ+ +I K LGTPT + P
Sbjct: 214 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNY 273
Query: 246 SE--LPGAKANFAKQPYN-LLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDD 302
+E P KA+ P+ + R R P + L +RLL Y P R+T +
Sbjct: 274 TEFKFPQIKAH----PWTKVFRPRTPPEAIA-----------LCSRLLEYTPTARLTPLE 318
Query: 303 ALNHYWFHE-----VPLPKSKD 319
A H +F E V LP +D
Sbjct: 319 ACAHSFFDELRDPNVKLPNGRD 340
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 162 bits (410), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 110/322 (34%), Positives = 167/322 (51%), Gaps = 49/322 (15%)
Query: 19 ISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSI 78
I G++G+VY+A+ SGE+VA+KKV + K RE+ I+ DH +I
Sbjct: 62 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------------RELQIMRKLDHCNI 109
Query: 79 VNVKEVVM---DDHDSVYM--VMEYMEHDLKWLME---SMKQPFSTSEVKCLMLQLLEGV 130
V ++ + D VY+ V++Y+ + + KQ VK M QL +
Sbjct: 110 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 169
Query: 131 KYLHDNWVLHRDLKTSNLLLN-NQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELL 189
Y+H + HRD+K NLLL+ + VLK+CDFG ++Q +P S + + +YRAPEL+
Sbjct: 170 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSXICSRYYRAPELI 228
Query: 190 LGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPT----ETIWPGL 245
GA Y++++D+WS GC++AELL +P+F G + VDQ+ +I K LGTPT + P
Sbjct: 229 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNY 288
Query: 246 SE--LPGAKANFAKQPYN-LLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDD 302
+E P KA+ P+ + R R P + L +RLL Y P R+T +
Sbjct: 289 TEFKFPQIKAH----PWTKVFRPRTPPEAIA-----------LCSRLLEYTPTARLTPLE 333
Query: 303 ALNHYWFHE-----VPLPKSKD 319
A H +F E V LP +D
Sbjct: 334 ACAHSFFDELRDPNVKLPNGRD 355
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 162 bits (410), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 110/322 (34%), Positives = 167/322 (51%), Gaps = 49/322 (15%)
Query: 19 ISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSI 78
I G++G+VY+A+ SGE+VA+KKV + K RE+ I+ DH +I
Sbjct: 40 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------------RELQIMRKLDHCNI 87
Query: 79 VNVKEVVM---DDHDSVYM--VMEYMEHDLKWLME---SMKQPFSTSEVKCLMLQLLEGV 130
V ++ + D VY+ V++Y+ + + KQ VK M QL +
Sbjct: 88 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 147
Query: 131 KYLHDNWVLHRDLKTSNLLLN-NQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELL 189
Y+H + HRD+K NLLL+ + VLK+CDFG ++Q +P S + + +YRAPEL+
Sbjct: 148 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSXICSRYYRAPELI 206
Query: 190 LGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPT----ETIWPGL 245
GA Y++++D+WS GC++AELL +P+F G + VDQ+ +I K LGTPT + P
Sbjct: 207 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNY 266
Query: 246 SE--LPGAKANFAKQPYN-LLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDD 302
+E P KA+ P+ + R R P + L +RLL Y P R+T +
Sbjct: 267 TEFKFPQIKAH----PWTKVFRPRTPPEAIA-----------LCSRLLEYTPTARLTPLE 311
Query: 303 ALNHYWFHE-----VPLPKSKD 319
A H +F E V LP +D
Sbjct: 312 ACAHSFFDELRDPNVKLPNGRD 333
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 162 bits (409), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 110/322 (34%), Positives = 167/322 (51%), Gaps = 49/322 (15%)
Query: 19 ISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSI 78
I G++G+VY+A+ SGE+VA+KKV + K RE+ I+ DH +I
Sbjct: 32 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------------RELQIMRKLDHCNI 79
Query: 79 VNVKEVVM---DDHDSVYM--VMEYMEHDLKWLME---SMKQPFSTSEVKCLMLQLLEGV 130
V ++ + D VY+ V++Y+ + + KQ VK M QL +
Sbjct: 80 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 139
Query: 131 KYLHDNWVLHRDLKTSNLLLN-NQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELL 189
Y+H + HRD+K NLLL+ + VLK+CDFG ++Q +P S + + +YRAPEL+
Sbjct: 140 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSXICSRYYRAPELI 198
Query: 190 LGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPT----ETIWPGL 245
GA Y++++D+WS GC++AELL +P+F G + VDQ+ +I K LGTPT + P
Sbjct: 199 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNY 258
Query: 246 SE--LPGAKANFAKQPYN-LLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDD 302
+E P KA+ P+ + R R P + L +RLL Y P R+T +
Sbjct: 259 TEFKFPQIKAH----PWTKVFRPRTPPEAIA-----------LCSRLLEYTPTARLTPLE 303
Query: 303 ALNHYWFHE-----VPLPKSKD 319
A H +F E V LP +D
Sbjct: 304 ACAHSFFDELRDPNVKLPNGRD 325
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 162 bits (409), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 110/322 (34%), Positives = 167/322 (51%), Gaps = 49/322 (15%)
Query: 19 ISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSI 78
I G++G+VY+A+ SGE+VA+KKV + K RE+ I+ DH +I
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------------RELQIMRKLDHCNI 75
Query: 79 VNVKEVVM---DDHDSVYM--VMEYMEHDLKWLME---SMKQPFSTSEVKCLMLQLLEGV 130
V ++ + D VY+ V++Y+ + + KQ VK M QL +
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 135
Query: 131 KYLHDNWVLHRDLKTSNLLLN-NQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELL 189
Y+H + HRD+K NLLL+ + VLK+CDFG ++Q +P S + + +YRAPEL+
Sbjct: 136 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSXICSRYYRAPELI 194
Query: 190 LGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPT----ETIWPGL 245
GA Y++++D+WS GC++AELL +P+F G + VDQ+ +I K LGTPT + P
Sbjct: 195 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNY 254
Query: 246 SE--LPGAKANFAKQPYN-LLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDD 302
+E P KA+ P+ + R R P + L +RLL Y P R+T +
Sbjct: 255 TEFKFPQIKAH----PWTKVFRPRTPPEAIA-----------LCSRLLEYTPTARLTPLE 299
Query: 303 ALNHYWFHE-----VPLPKSKD 319
A H +F E V LP +D
Sbjct: 300 ACAHSFFDELRDPNVKLPNGRD 321
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 162 bits (409), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 101/311 (32%), Positives = 162/311 (52%), Gaps = 22/311 (7%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
++ L+ + G YG V A D K+G VA+KK+ R + + + RE+ +L
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL----SRPFQSIIHA--KRTYRELRLLKH 77
Query: 73 FDHPSIVNVKEVV-----MDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLL 127
H +++ + +V +++ + VY+V M DL +++ Q + V+ L+ Q+L
Sbjct: 78 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHVQFLIYQIL 135
Query: 128 EGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPE 187
G+KY+H ++HRDLK SNL +N LKI D G++R + Y V T WYRAPE
Sbjct: 136 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDRGLARHTDDEMTGY---VATRWYRAPE 192
Query: 188 LLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSE 247
++L Y+ VD+WSVGCIMAELL + LF GT +DQ+ I + +GTP + +S
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 252
Query: 248 LPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHY 307
+ N+ + + + F +P+ DLL ++L D +KRIT AL H
Sbjct: 253 --ESARNYIQSLTQMPKMNFANVFIGANPL----AVDLLEKMLVLDSDKRITAAQALAHA 306
Query: 308 WFHEVPLPKSK 318
+F + P +
Sbjct: 307 YFAQYHDPDDE 317
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 162 bits (409), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 110/322 (34%), Positives = 167/322 (51%), Gaps = 49/322 (15%)
Query: 19 ISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSI 78
I G++G+VY+A+ SGE+VA+KKV + K RE+ I+ DH +I
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------------RELQIMRKLDHCNI 75
Query: 79 VNVKEVVM---DDHDSVYM--VMEYMEHDLKWLME---SMKQPFSTSEVKCLMLQLLEGV 130
V ++ + D VY+ V++Y+ + + KQ VK M QL +
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 135
Query: 131 KYLHDNWVLHRDLKTSNLLLN-NQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELL 189
Y+H + HRD+K NLLL+ + VLK+CDFG ++Q +P S + + +YRAPEL+
Sbjct: 136 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSXICSRYYRAPELI 194
Query: 190 LGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPT----ETIWPGL 245
GA Y++++D+WS GC++AELL +P+F G + VDQ+ +I K LGTPT + P
Sbjct: 195 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNY 254
Query: 246 SE--LPGAKANFAKQPYN-LLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDD 302
+E P KA+ P+ + R R P + L +RLL Y P R+T +
Sbjct: 255 TEFKFPQIKAH----PWTKVFRPRTPPEAIA-----------LCSRLLEYTPTARLTPLE 299
Query: 303 ALNHYWFHE-----VPLPKSKD 319
A H +F E V LP +D
Sbjct: 300 ACAHSFFDELRDPNVKLPNGRD 321
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 162 bits (409), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 101/311 (32%), Positives = 162/311 (52%), Gaps = 22/311 (7%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
++ L+ + G YG V A D K+G VA+KK+ R + + + RE+ +L
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL----SRPFQSIIHA--KRTYRELRLLKH 77
Query: 73 FDHPSIVNVKEVV-----MDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLL 127
H +++ + +V +++ + VY+V M DL +++ Q + V+ L+ Q+L
Sbjct: 78 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHVQFLIYQIL 135
Query: 128 EGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPE 187
G+KY+H ++HRDLK SNL +N LKI D G++R + Y V T WYRAPE
Sbjct: 136 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDGGLARHTDDEMTGY---VATRWYRAPE 192
Query: 188 LLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSE 247
++L Y+ VD+WSVGCIMAELL + LF GT +DQ+ I + +GTP + +S
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 252
Query: 248 LPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHY 307
+ N+ + + + F +P+ DLL ++L D +KRIT AL H
Sbjct: 253 --ESARNYIQSLTQMPKMNFANVFIGANPL----AVDLLEKMLVLDSDKRITAAQALAHA 306
Query: 308 WFHEVPLPKSK 318
+F + P +
Sbjct: 307 YFAQYHDPDDE 317
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 162 bits (409), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 110/322 (34%), Positives = 167/322 (51%), Gaps = 49/322 (15%)
Query: 19 ISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSI 78
I G++G+VY+A+ SGE+VA+KKV + K RE+ I+ DH +I
Sbjct: 29 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------------RELQIMRKLDHCNI 76
Query: 79 VNVKEVVM---DDHDSVYM--VMEYMEHDLKWLME---SMKQPFSTSEVKCLMLQLLEGV 130
V ++ + D VY+ V++Y+ + + KQ VK M QL +
Sbjct: 77 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 136
Query: 131 KYLHDNWVLHRDLKTSNLLLN-NQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELL 189
Y+H + HRD+K NLLL+ + VLK+CDFG ++Q +P S + + +YRAPEL+
Sbjct: 137 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSXICSRYYRAPELI 195
Query: 190 LGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPT----ETIWPGL 245
GA Y++++D+WS GC++AELL +P+F G + VDQ+ +I K LGTPT + P
Sbjct: 196 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNY 255
Query: 246 SE--LPGAKANFAKQPYN-LLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDD 302
+E P KA+ P+ + R R P + L +RLL Y P R+T +
Sbjct: 256 TEFKFPQIKAH----PWTKVFRPRTPPEAIA-----------LCSRLLEYTPTARLTPLE 300
Query: 303 ALNHYWFHE-----VPLPKSKD 319
A H +F E V LP +D
Sbjct: 301 ACAHSFFDELRDPNVKLPNGRD 322
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 162 bits (409), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 110/322 (34%), Positives = 167/322 (51%), Gaps = 49/322 (15%)
Query: 19 ISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSI 78
I G++G+VY+A+ SGE+VA+KKV + K RE+ I+ DH +I
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------------RELQIMRKLDHCNI 75
Query: 79 VNVKEVVM---DDHDSVYM--VMEYMEHDLKWLME---SMKQPFSTSEVKCLMLQLLEGV 130
V ++ + D VY+ V++Y+ + + KQ VK M QL +
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 135
Query: 131 KYLHDNWVLHRDLKTSNLLLN-NQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELL 189
Y+H + HRD+K NLLL+ + VLK+CDFG ++Q +P S + + +YRAPEL+
Sbjct: 136 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSYICSRYYRAPELI 194
Query: 190 LGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPT----ETIWPGL 245
GA Y++++D+WS GC++AELL +P+F G + VDQ+ +I K LGTPT + P
Sbjct: 195 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNY 254
Query: 246 SE--LPGAKANFAKQPYN-LLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDD 302
+E P KA+ P+ + R R P + L +RLL Y P R+T +
Sbjct: 255 TEFKFPQIKAH----PWTKVFRPRTPPEAIA-----------LCSRLLEYTPTARLTPLE 299
Query: 303 ALNHYWFHE-----VPLPKSKD 319
A H +F E V LP +D
Sbjct: 300 ACAHSFFDELRDPNVKLPNGRD 321
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 162 bits (409), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 110/322 (34%), Positives = 167/322 (51%), Gaps = 49/322 (15%)
Query: 19 ISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSI 78
I G++G+VY+A+ SGE+VA+KKV + K RE+ I+ DH +I
Sbjct: 41 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------------RELQIMRKLDHCNI 88
Query: 79 VNVKEVVM---DDHDSVYM--VMEYMEHDLKWLME---SMKQPFSTSEVKCLMLQLLEGV 130
V ++ + D VY+ V++Y+ + + KQ VK M QL +
Sbjct: 89 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 148
Query: 131 KYLHDNWVLHRDLKTSNLLLN-NQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELL 189
Y+H + HRD+K NLLL+ + VLK+CDFG ++Q +P S + + +YRAPEL+
Sbjct: 149 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSYICSRYYRAPELI 207
Query: 190 LGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPT----ETIWPGL 245
GA Y++++D+WS GC++AELL +P+F G + VDQ+ +I K LGTPT + P
Sbjct: 208 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNY 267
Query: 246 SE--LPGAKANFAKQPYN-LLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDD 302
+E P KA+ P+ + R R P + L +RLL Y P R+T +
Sbjct: 268 TEFKFPQIKAH----PWTKVFRPRTPPEAIA-----------LCSRLLEYTPTARLTPLE 312
Query: 303 ALNHYWFHE-----VPLPKSKD 319
A H +F E V LP +D
Sbjct: 313 ACAHSFFDELRDPNVKLPNGRD 334
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 161 bits (408), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 110/322 (34%), Positives = 167/322 (51%), Gaps = 49/322 (15%)
Query: 19 ISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSI 78
I G++G+VY+A+ SGE+VA+KKV + K RE+ I+ DH +I
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------------RELQIMRKLDHCNI 75
Query: 79 VNVKEVVM---DDHDSVYM--VMEYMEHDLKWLME---SMKQPFSTSEVKCLMLQLLEGV 130
V ++ + D VY+ V++Y+ + + KQ VK M QL +
Sbjct: 76 VRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 135
Query: 131 KYLHDNWVLHRDLKTSNLLLN-NQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELL 189
Y+H + HRD+K NLLL+ + VLK+CDFG ++Q +P S + + +YRAPEL+
Sbjct: 136 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSXICSRYYRAPELI 194
Query: 190 LGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPT----ETIWPGL 245
GA Y++++D+WS GC++AELL +P+F G + VDQ+ +I K LGTPT + P
Sbjct: 195 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNY 254
Query: 246 SE--LPGAKANFAKQPYN-LLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDD 302
+E P KA+ P+ + R R P + L +RLL Y P R+T +
Sbjct: 255 TEFKFPQIKAH----PWTKVFRPRTPPEAIA-----------LCSRLLEYTPTARLTPLE 299
Query: 303 ALNHYWFHE-----VPLPKSKD 319
A H +F E V LP +D
Sbjct: 300 ACAHSFFDELRDPNVKLPNGRD 321
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 161 bits (407), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 106/315 (33%), Positives = 163/315 (51%), Gaps = 36/315 (11%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
+ L + G G+V+ A D + VA+KK+ + + +LREI I+
Sbjct: 13 YMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVK--------HALREIKIIRR 64
Query: 73 FDHPSIVNVKEVV-------------MDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEV 119
DH +IV V E++ + + +SVY+V EYME DL ++E + P
Sbjct: 65 LDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLE--QGPLLEEHA 122
Query: 120 KCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQG-VLKICDFGMSR---QYGSPLKPYT 175
+ M QLL G+KY+H VLHRDLK +NL +N + VLKI DFG++R + S +
Sbjct: 123 RLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLS 182
Query: 176 SLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLG 235
+VT WYR+P LLL Y+ A+DMW+ GCI AE+L K LF+G E++Q+ I +++
Sbjct: 183 EGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIP 242
Query: 236 -TPTETIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDP 294
E LS +P N +P+ L + P +S D L ++LT+ P
Sbjct: 243 VVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPG--------ISREAVDFLEQILTFSP 294
Query: 295 EKRITVDDALNHYWF 309
R+T ++AL+H +
Sbjct: 295 MDRLTAEEALSHPYM 309
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 158 bits (400), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 104/320 (32%), Positives = 167/320 (52%), Gaps = 36/320 (11%)
Query: 19 ISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSI 78
I G++G+V++A+ +S E VA+KKV + K RE+ I+ HP++
Sbjct: 48 IGNGSFGVVFQAKLVESDE-VAIKKVLQDKRFKN------------RELQIMRIVKHPNV 94
Query: 79 VNVKEVVM---DDHDSVYM--VMEYMEHDLKWLME---SMKQPFSTSEVKCLMLQLLEGV 130
V++K D D V++ V+EY+ + +KQ +K M QLL +
Sbjct: 95 VDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSL 154
Query: 131 KYLHDNWVLHRDLKTSNLLLNN-QGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELL 189
Y+H + HRD+K NLLL+ GVLK+ DFG ++ + +P S + + +YRAPEL+
Sbjct: 155 AYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAG-EPNVSXICSRYYRAPELI 213
Query: 190 LGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELP 249
GA Y+T +D+WS GC+MAEL+ +PLF G + +DQ+ +I K LGTP+ ++
Sbjct: 214 FGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSR------EQIK 267
Query: 250 GAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWF 309
N+ + + +R + F P DL++RLL Y P R+T +AL H +F
Sbjct: 268 TMNPNYMEHKFPQIRPHPFSKVF--RPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFF 325
Query: 310 HEV-----PLPKSKDFMPTF 324
E+ +P ++ P F
Sbjct: 326 DELRTGEARMPNGRELPPLF 345
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 155 bits (392), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 109/329 (33%), Positives = 169/329 (51%), Gaps = 37/329 (11%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
++ L I G GIV A D VA+KK+ + + RE+ ++
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKR------AYRELVLMKC 79
Query: 73 FDHPSIVNVKEV-----VMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLL 127
+H +I+++ V +++ VY+VME M+ +L + ++ + L+ Q+L
Sbjct: 80 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANL---XQVIQMELDHERMSYLLYQML 136
Query: 128 EGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSP--LKPYTSLVVTLWYRA 185
G+K+LH ++HRDLK SN+++ + LKI DFG++R G+ + PY VVT +YRA
Sbjct: 137 XGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPY---VVTRYYRA 193
Query: 186 PELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGL 245
PE++LG Y VD+WSVGCIM E++ K LF G +DQ +K+ + LGTP L
Sbjct: 194 PEVILGM-GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL 252
Query: 246 SELPGAKANFAKQP-YNLLR--KRFPAASFTG----SPVLSESGFDLLNRLLTYDPEKRI 298
P + +P Y L K FP + F + + + DLL+++L DP KRI
Sbjct: 253 Q--PTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRI 310
Query: 299 TVDDALNH----YWFH----EVPLPKSKD 319
+VDDAL H W+ E P P+ D
Sbjct: 311 SVDDALQHPYINVWYDPAEVEAPPPQIYD 339
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 155 bits (392), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 109/329 (33%), Positives = 169/329 (51%), Gaps = 37/329 (11%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
++ L I G GIV A D VA+KK+ + + RE+ ++
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKR------AYRELVLMKX 79
Query: 73 FDHPSIVNVKEV-----VMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLL 127
+H +I+++ V +++ VY+VME M+ +L + ++ + L+ Q+L
Sbjct: 80 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANL---XQVIQMELDHERMSYLLYQML 136
Query: 128 EGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSP--LKPYTSLVVTLWYRA 185
G+K+LH ++HRDLK SN+++ + LKI DFG++R G+ + PY VVT +YRA
Sbjct: 137 XGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPY---VVTRYYRA 193
Query: 186 PELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGL 245
PE++LG Y VD+WSVGCIM E++ K LF G +DQ +K+ + LGTP L
Sbjct: 194 PEVILGM-GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL 252
Query: 246 SELPGAKANFAKQP-YNLLR--KRFPAASFTG----SPVLSESGFDLLNRLLTYDPEKRI 298
P + +P Y L K FP + F + + + DLL+++L DP KRI
Sbjct: 253 Q--PTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRI 310
Query: 299 TVDDALNH----YWFH----EVPLPKSKD 319
+VDDAL H W+ E P P+ D
Sbjct: 311 SVDDALQHPYINVWYDPAEVEAPPPQIYD 339
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 155 bits (392), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 108/327 (33%), Positives = 167/327 (51%), Gaps = 33/327 (10%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
++ L I G GIV A D VA+KK+ + + RE+ ++
Sbjct: 19 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKR------AYRELVLMKC 72
Query: 73 FDHPSIVNVKEV-----VMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLL 127
+H +I+++ V +++ VY+VME M+ +L + ++ + L+ Q+L
Sbjct: 73 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANL---XQVIQMELDHERMSYLLYQML 129
Query: 128 EGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPE 187
G+K+LH ++HRDLK SN+++ + LKI DFG++R G+ T VVT +YRAPE
Sbjct: 130 XGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFM-MTPYVVTRYYRAPE 188
Query: 188 LLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSE 247
++LG Y VD+WSVGCIM E++ K LF G +DQ +K+ + LGTP L
Sbjct: 189 VILGM-GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ- 246
Query: 248 LPGAKANFAKQP-YNLLR--KRFPAASFTG----SPVLSESGFDLLNRLLTYDPEKRITV 300
P + +P Y L K FP + F + + + DLL+++L DP KRI+V
Sbjct: 247 -PTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISV 305
Query: 301 DDALNH----YWFH----EVPLPKSKD 319
DDAL H W+ E P P+ D
Sbjct: 306 DDALQHPYINVWYDPAEVEAPPPQIYD 332
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 155 bits (392), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 107/327 (32%), Positives = 168/327 (51%), Gaps = 33/327 (10%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
+++L I G GIV A D G VA+KK+ + + RE+ +L
Sbjct: 26 YQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKR------AYRELVLLKC 79
Query: 73 FDHPSIVNVKEV-----VMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLL 127
+H +I+++ V +++ VY+VME M+ +L + + + L+ Q+L
Sbjct: 80 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANL---CQVIHMELDHERMSYLLYQML 136
Query: 128 EGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSP--LKPYTSLVVTLWYRA 185
G+K+LH ++HRDLK SN+++ + LKI DFG++R + + PY VVT +YRA
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFMMTPY---VVTRYYRA 193
Query: 186 PELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGL 245
PE++LG Y+ VD+WSVGCIM EL+ +F GT +DQ +K+ + LGTP+ L
Sbjct: 194 PEVILGMG-YAANVDIWSVGCIMGELVKGCVIFQGTDHIDQWNKVIEQLGTPSAEFMAAL 252
Query: 246 S-ELPGAKANFAKQPYNLLRKRFPAASFTGSP----VLSESGFDLLNRLLTYDPEKRITV 300
+ N K P + FP F + + DLL+++L DP+KRI+V
Sbjct: 253 QPTVRNYVENRPKYPGIKFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKRISV 312
Query: 301 DDALNH----YWFH----EVPLPKSKD 319
D+AL H W+ E P P+ D
Sbjct: 313 DEALRHPYITVWYDPAEAEAPPPQIYD 339
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 154 bits (390), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 109/329 (33%), Positives = 169/329 (51%), Gaps = 37/329 (11%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
++ L I G GIV A D VA+KK+ + + RE+ ++
Sbjct: 64 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKR------AYRELVLMKC 117
Query: 73 FDHPSIVNVKEV-----VMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLL 127
+H +I+++ V +++ VY+VME M+ +L + ++ + L+ Q+L
Sbjct: 118 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANL---CQVIQMELDHERMSYLLYQML 174
Query: 128 EGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSP--LKPYTSLVVTLWYRA 185
G+K+LH ++HRDLK SN+++ + LKI DFG++R G+ + PY VVT +YRA
Sbjct: 175 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPY---VVTRYYRA 231
Query: 186 PELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGL 245
PE++LG Y VD+WSVGCIM E++ K LF G +DQ +K+ + LGTP L
Sbjct: 232 PEVILGM-GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL 290
Query: 246 SELPGAKANFAKQP-YNLLR--KRFPAASFTG----SPVLSESGFDLLNRLLTYDPEKRI 298
P + +P Y L K FP + F + + + DLL+++L DP KRI
Sbjct: 291 Q--PTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRI 348
Query: 299 TVDDALNH----YWFH----EVPLPKSKD 319
+VDDAL H W+ E P P+ D
Sbjct: 349 SVDDALQHPYINVWYDPAEVEAPPPQIYD 377
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 154 bits (390), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 109/329 (33%), Positives = 169/329 (51%), Gaps = 37/329 (11%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
++ L I G GIV A D VA+KK+ + + RE+ ++
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKR------AYRELVLMKC 79
Query: 73 FDHPSIVNVKEV-----VMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLL 127
+H +I+++ V +++ VY+VME M+ +L + ++ + L+ Q+L
Sbjct: 80 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANL---CQVIQMELDHERMSYLLYQML 136
Query: 128 EGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSP--LKPYTSLVVTLWYRA 185
G+K+LH ++HRDLK SN+++ + LKI DFG++R G+ + PY VVT +YRA
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPY---VVTRYYRA 193
Query: 186 PELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGL 245
PE++LG Y VD+WSVGCIM E++ K LF G +DQ +K+ + LGTP L
Sbjct: 194 PEVILGM-GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL 252
Query: 246 SELPGAKANFAKQP-YNLLR--KRFPAASFTG----SPVLSESGFDLLNRLLTYDPEKRI 298
P + +P Y L K FP + F + + + DLL+++L DP KRI
Sbjct: 253 Q--PTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRI 310
Query: 299 TVDDALNH----YWFH----EVPLPKSKD 319
+VDDAL H W+ E P P+ D
Sbjct: 311 SVDDALQHPYINVWYDPAEVEAPPPQIYD 339
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 154 bits (390), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 108/327 (33%), Positives = 167/327 (51%), Gaps = 33/327 (10%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
++ L I G GIV A D VA+KK+ + + RE+ ++
Sbjct: 20 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKR------AYRELVLMKC 73
Query: 73 FDHPSIVNVKEV-----VMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLL 127
+H +I+++ V +++ VY+VME M+ +L + ++ + L+ Q+L
Sbjct: 74 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANL---CQVIQMELDHERMSYLLYQML 130
Query: 128 EGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPE 187
G+K+LH ++HRDLK SN+++ + LKI DFG++R G+ T VVT +YRAPE
Sbjct: 131 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFM-MTPYVVTRYYRAPE 189
Query: 188 LLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSE 247
++LG Y VD+WSVGCIM E++ K LF G +DQ +K+ + LGTP L
Sbjct: 190 VILGM-GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ- 247
Query: 248 LPGAKANFAKQP-YNLLR--KRFPAASFTG----SPVLSESGFDLLNRLLTYDPEKRITV 300
P + +P Y L K FP + F + + + DLL+++L DP KRI+V
Sbjct: 248 -PTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISV 306
Query: 301 DDALNH----YWFH----EVPLPKSKD 319
DDAL H W+ E P P+ D
Sbjct: 307 DDALQHPYINVWYDPAEVEAPPPQIYD 333
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 154 bits (390), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 108/327 (33%), Positives = 167/327 (51%), Gaps = 33/327 (10%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
++ L I G GIV A D VA+KK+ + + RE+ ++
Sbjct: 20 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKR------AYRELVLMKC 73
Query: 73 FDHPSIVNVKEV-----VMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLL 127
+H +I+++ V +++ VY+VME M+ +L + ++ + L+ Q+L
Sbjct: 74 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANL---CQVIQMELDHERMSYLLYQML 130
Query: 128 EGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPE 187
G+K+LH ++HRDLK SN+++ + LKI DFG++R G+ T VVT +YRAPE
Sbjct: 131 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFM-MTPYVVTRYYRAPE 189
Query: 188 LLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSE 247
++LG Y VD+WSVGCIM E++ K LF G +DQ +K+ + LGTP L
Sbjct: 190 VILGM-GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ- 247
Query: 248 LPGAKANFAKQP-YNLLR--KRFPAASFTG----SPVLSESGFDLLNRLLTYDPEKRITV 300
P + +P Y L K FP + F + + + DLL+++L DP KRI+V
Sbjct: 248 -PTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISV 306
Query: 301 DDALNH----YWFH----EVPLPKSKD 319
DDAL H W+ E P P+ D
Sbjct: 307 DDALQHPYINVWYDPAEVEAPPPQIYD 333
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 154 bits (389), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 106/327 (32%), Positives = 166/327 (50%), Gaps = 33/327 (10%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
+++L I G GIV A D G VA+KK+ + + RE+ +L
Sbjct: 24 YQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKR------AYRELVLLKC 77
Query: 73 FDHPSIVNVKEV-----VMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLL 127
+H +I+++ V +++ VY+VME M+ +L + + + L+ Q+L
Sbjct: 78 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANL---CQVIHMELDHERMSYLLYQML 134
Query: 128 EGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSP--LKPYTSLVVTLWYRA 185
G+K+LH ++HRDLK SN+++ + LKI DFG++R + + PY VVT +YRA
Sbjct: 135 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTASTNFMMTPY---VVTRYYRA 191
Query: 186 PELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGL 245
PE++LG Y VD+WSVGCIM EL+ +F GT +DQ +K+ + LGTP+ L
Sbjct: 192 PEVILGMG-YKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMAAL 250
Query: 246 S-ELPGAKANFAKQPYNLLRKRFPAASFTGSP----VLSESGFDLLNRLLTYDPEKRITV 300
+ N P + FP F + + DLL+++L DP+KRI+V
Sbjct: 251 QPTVRNYVENRPAYPGIAFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKRISV 310
Query: 301 DDALNH----YWFH----EVPLPKSKD 319
D+AL H W+ E P P+ D
Sbjct: 311 DEALRHPYITVWYDPAEAEAPPPQIYD 337
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 154 bits (389), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 109/329 (33%), Positives = 169/329 (51%), Gaps = 37/329 (11%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
++ L I G GIV A D VA+KK+ + + RE+ ++
Sbjct: 64 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKR------AYRELVLMKC 117
Query: 73 FDHPSIVNVKEV-----VMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLL 127
+H +I+++ V +++ VY+VME M+ +L + ++ + L+ Q+L
Sbjct: 118 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANL---CQVIQMELDHERMSYLLYQML 174
Query: 128 EGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSP--LKPYTSLVVTLWYRA 185
G+K+LH ++HRDLK SN+++ + LKI DFG++R G+ + PY VVT +YRA
Sbjct: 175 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPY---VVTRYYRA 231
Query: 186 PELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGL 245
PE++LG Y VD+WSVGCIM E++ K LF G +DQ +K+ + LGTP L
Sbjct: 232 PEVILGM-GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL 290
Query: 246 SELPGAKANFAKQP-YNLLR--KRFPAASFTG----SPVLSESGFDLLNRLLTYDPEKRI 298
P + +P Y L K FP + F + + + DLL+++L DP KRI
Sbjct: 291 Q--PTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRI 348
Query: 299 TVDDALNH----YWFH----EVPLPKSKD 319
+VDDAL H W+ E P P+ D
Sbjct: 349 SVDDALQHPYINVWYDPAEVEAPPPQIYD 377
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 154 bits (389), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 109/329 (33%), Positives = 169/329 (51%), Gaps = 37/329 (11%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
++ L I G GIV A D VA+KK+ + + RE+ ++
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKR------AYRELVLMKC 79
Query: 73 FDHPSIVNVKEV-----VMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLL 127
+H +I+++ V +++ VY+VME M+ +L + ++ + L+ Q+L
Sbjct: 80 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANL---CQVIQMELDHERMSYLLYQML 136
Query: 128 EGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSP--LKPYTSLVVTLWYRA 185
G+K+LH ++HRDLK SN+++ + LKI DFG++R G+ + PY VVT +YRA
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPY---VVTRYYRA 193
Query: 186 PELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGL 245
PE++LG Y VD+WSVGCIM E++ K LF G +DQ +K+ + LGTP L
Sbjct: 194 PEVILGM-GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL 252
Query: 246 SELPGAKANFAKQP-YNLLR--KRFPAASFTG----SPVLSESGFDLLNRLLTYDPEKRI 298
P + +P Y L K FP + F + + + DLL+++L DP KRI
Sbjct: 253 Q--PTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRI 310
Query: 299 TVDDALNH----YWFH----EVPLPKSKD 319
+VDDAL H W+ E P P+ D
Sbjct: 311 SVDDALQHPYINVWYDPAEVEAPPPQIYD 339
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 154 bits (389), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 108/327 (33%), Positives = 167/327 (51%), Gaps = 33/327 (10%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
++ L I G GIV A D VA+KK+ + + RE+ ++
Sbjct: 19 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKR------AYRELVLMKC 72
Query: 73 FDHPSIVNVKEV-----VMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLL 127
+H +I+++ V +++ VY+VME M+ +L + ++ + L+ Q+L
Sbjct: 73 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANL---CQVIQMELDHERMSYLLYQML 129
Query: 128 EGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPE 187
G+K+LH ++HRDLK SN+++ + LKI DFG++R G+ T VVT +YRAPE
Sbjct: 130 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFM-MTPYVVTRYYRAPE 188
Query: 188 LLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSE 247
++LG Y VD+WSVGCIM E++ K LF G +DQ +K+ + LGTP L
Sbjct: 189 VILGM-GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ- 246
Query: 248 LPGAKANFAKQP-YNLLR--KRFPAASFTG----SPVLSESGFDLLNRLLTYDPEKRITV 300
P + +P Y L K FP + F + + + DLL+++L DP KRI+V
Sbjct: 247 -PTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISV 305
Query: 301 DDALNH----YWFH----EVPLPKSKD 319
DDAL H W+ E P P+ D
Sbjct: 306 DDALQHPYINVWYDPAEVEAPPPQIYD 332
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 154 bits (389), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 109/329 (33%), Positives = 169/329 (51%), Gaps = 37/329 (11%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
++ L I G GIV A D VA+KK+ + + RE+ ++
Sbjct: 27 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKR------AYRELVLMKC 80
Query: 73 FDHPSIVNVKEV-----VMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLL 127
+H +I+++ V +++ VY+VME M+ +L + ++ + L+ Q+L
Sbjct: 81 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANL---CQVIQMELDHERMSYLLYQML 137
Query: 128 EGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSP--LKPYTSLVVTLWYRA 185
G+K+LH ++HRDLK SN+++ + LKI DFG++R G+ + PY VVT +YRA
Sbjct: 138 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPY---VVTRYYRA 194
Query: 186 PELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGL 245
PE++LG Y VD+WSVGCIM E++ K LF G +DQ +K+ + LGTP L
Sbjct: 195 PEVILGM-GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL 253
Query: 246 SELPGAKANFAKQP-YNLLR--KRFPAASFTG----SPVLSESGFDLLNRLLTYDPEKRI 298
P + +P Y L K FP + F + + + DLL+++L DP KRI
Sbjct: 254 Q--PTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRI 311
Query: 299 TVDDALNH----YWFH----EVPLPKSKD 319
+VDDAL H W+ E P P+ D
Sbjct: 312 SVDDALQHPYINVWYDPAEVEAPPPQIYD 340
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 154 bits (389), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 109/329 (33%), Positives = 169/329 (51%), Gaps = 37/329 (11%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
++ L I G GIV A D VA+KK+ + + RE+ ++
Sbjct: 25 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKR------AYRELVLMKC 78
Query: 73 FDHPSIVNVKEV-----VMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLL 127
+H +I+++ V +++ VY+VME M+ +L + ++ + L+ Q+L
Sbjct: 79 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANL---CQVIQMELDHERMSYLLYQML 135
Query: 128 EGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSP--LKPYTSLVVTLWYRA 185
G+K+LH ++HRDLK SN+++ + LKI DFG++R G+ + PY VVT +YRA
Sbjct: 136 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPY---VVTRYYRA 192
Query: 186 PELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGL 245
PE++LG Y VD+WSVGCIM E++ K LF G +DQ +K+ + LGTP L
Sbjct: 193 PEVILGM-GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL 251
Query: 246 SELPGAKANFAKQP-YNLLR--KRFPAASFTG----SPVLSESGFDLLNRLLTYDPEKRI 298
P + +P Y L K FP + F + + + DLL+++L DP KRI
Sbjct: 252 Q--PTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRI 309
Query: 299 TVDDALNH----YWFH----EVPLPKSKD 319
+VDDAL H W+ E P P+ D
Sbjct: 310 SVDDALQHPYINVWYDPAEVEAPPPQIYD 338
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 154 bits (389), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 114/355 (32%), Positives = 171/355 (48%), Gaps = 78/355 (21%)
Query: 19 ISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSI 78
I G+YG VY A DK + + VA+KKV DC LREI IL I
Sbjct: 36 IGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRI------LREITILNRLKSDYI 89
Query: 79 VNVKEVVMDDH----DSVYMVMEYMEHDLKWLMESMKQPFSTSE--VKCLMLQLLEGVKY 132
+ + ++++ + D +Y+V+E + DLK L K P +E VK ++ LL G K+
Sbjct: 90 IRLHDLIIPEDLLKFDELYIVLEIADSDLKKLF---KTPIFLTEQHVKTILYNLLLGEKF 146
Query: 133 LHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSP---------------------- 170
+H++ ++HRDLK +N LLN +KICDFG++R S
Sbjct: 147 IHESGIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEKEENEEPGPHN 206
Query: 171 ---LKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELL-----------AKKP 216
K TS VVT WYRAPEL+L + Y+ ++D+WS GCI AELL + P
Sbjct: 207 KNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELLNMMKSHINNPTNRFP 266
Query: 217 LFSGT-----------------TEVDQIDKIFKTLGTPTETIWPGLSELPGAK--ANFAK 257
LF G+ + DQ++ IF +GTP E +++ K F
Sbjct: 267 LFPGSSCFPLSPDHNSKKVHEKSNRDQLNIIFNVIGTPPEEDLKCITKQEVIKYIKLFPT 326
Query: 258 QPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEV 312
+ L K++ + +S+ G DLL +L ++ +KRIT+D AL+H + +V
Sbjct: 327 RDGIDLSKKYSS--------ISKEGIDLLESMLRFNAQKRITIDKALSHPYLKDV 373
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 154 bits (389), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 109/329 (33%), Positives = 169/329 (51%), Gaps = 37/329 (11%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
++ L I G GIV A D VA+KK+ + + RE+ ++
Sbjct: 27 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKR------AYRELVLMKC 80
Query: 73 FDHPSIVNVKEV-----VMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLL 127
+H +I+++ V +++ VY+VME M+ +L + ++ + L+ Q+L
Sbjct: 81 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANL---CQVIQMELDHERMSYLLYQML 137
Query: 128 EGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSP--LKPYTSLVVTLWYRA 185
G+K+LH ++HRDLK SN+++ + LKI DFG++R G+ + PY VVT +YRA
Sbjct: 138 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPY---VVTRYYRA 194
Query: 186 PELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGL 245
PE++LG Y VD+WSVGCIM E++ K LF G +DQ +K+ + LGTP L
Sbjct: 195 PEVILGM-GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL 253
Query: 246 SELPGAKANFAKQP-YNLLR--KRFPAASFTG----SPVLSESGFDLLNRLLTYDPEKRI 298
P + +P Y L K FP + F + + + DLL+++L DP KRI
Sbjct: 254 Q--PTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRI 311
Query: 299 TVDDALNH----YWFH----EVPLPKSKD 319
+VDDAL H W+ E P P+ D
Sbjct: 312 SVDDALQHPYINVWYDPAEVEAPPPQIYD 340
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 154 bits (389), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 104/308 (33%), Positives = 162/308 (52%), Gaps = 29/308 (9%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
++ L I G GIV A D VA+KK+ + + RE+ ++
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKR------AYRELVLMKX 79
Query: 73 FDHPSIVNVKEV-----VMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLL 127
+H +I+++ V +++ VY+VME M+ +L + ++ + L+ Q+L
Sbjct: 80 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANL---XQVIQMELDHERMSYLLYQML 136
Query: 128 EGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSP--LKPYTSLVVTLWYRA 185
G+K+LH ++HRDLK SN+++ + LKI DFG++R G+ + PY VVT +YRA
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPY---VVTRYYRA 193
Query: 186 PELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGL 245
PE++LG Y VD+WSVGCIM E++ K LF G +DQ +K+ + LGTP L
Sbjct: 194 PEVILGM-GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL 252
Query: 246 SELPGAKANFAKQP-YNLLR--KRFPAASFTG----SPVLSESGFDLLNRLLTYDPEKRI 298
P + +P Y L K FP + F + + + DLL+++L DP KRI
Sbjct: 253 Q--PTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRI 310
Query: 299 TVDDALNH 306
+VDDAL H
Sbjct: 311 SVDDALQH 318
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 154 bits (388), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 104/308 (33%), Positives = 162/308 (52%), Gaps = 29/308 (9%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
++ L I G GIV A D VA+KK+ + + RE+ ++
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKR------AYRELVLMKX 79
Query: 73 FDHPSIVNVKEV-----VMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLL 127
+H +I+++ V +++ VY+VME M+ +L + ++ + L+ Q+L
Sbjct: 80 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANL---CQVIQMELDHERMSYLLYQML 136
Query: 128 EGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSP--LKPYTSLVVTLWYRA 185
G+K+LH ++HRDLK SN+++ + LKI DFG++R G+ + PY VVT +YRA
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPY---VVTRYYRA 193
Query: 186 PELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGL 245
PE++LG Y VD+WSVGCIM E++ K LF G +DQ +K+ + LGTP L
Sbjct: 194 PEVILGM-GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL 252
Query: 246 SELPGAKANFAKQP-YNLLR--KRFPAASFTG----SPVLSESGFDLLNRLLTYDPEKRI 298
P + +P Y L K FP + F + + + DLL+++L DP KRI
Sbjct: 253 Q--PTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRI 310
Query: 299 TVDDALNH 306
+VDDAL H
Sbjct: 311 SVDDALQH 318
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 153 bits (386), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 107/330 (32%), Positives = 167/330 (50%), Gaps = 39/330 (11%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
++ L I G GIV A D VA+KK+ + + RE+ ++
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKR------AYRELVLMKV 79
Query: 73 FDHPSIVNVKEVV-----MDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLL 127
+H +I+ + V +++ VY+VME M+ +L +++ + L+ Q+L
Sbjct: 80 VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQ---MELDHERMSYLLYQML 136
Query: 128 EGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSP--LKPYTSLVVTLWYRA 185
G+K+LH ++HRDLK SN+++ + LKI DFG++R G+ + PY VVT +YRA
Sbjct: 137 VGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPY---VVTRYYRA 193
Query: 186 PELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGL 245
PE++LG Y VD+WSVGCIM E++ LF GT +DQ +K+ + LGTP+ L
Sbjct: 194 PEVILGM-GYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKL 252
Query: 246 SELPGAKANFAKQP----YNLLRKRFPAASFTG----SPVLSESGFDLLNRLLTYDPEKR 297
P + +P Y+ K FP F + + + DLL+++L D KR
Sbjct: 253 Q--PTVRTYVENRPKYAGYS-FEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKR 309
Query: 298 ITVDDALNH----YWFH----EVPLPKSKD 319
I+VD+AL H W+ E P PK D
Sbjct: 310 ISVDEALQHPYINVWYDPSEAEAPPPKIPD 339
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 153 bits (386), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 107/330 (32%), Positives = 167/330 (50%), Gaps = 39/330 (11%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
++ L I G GIV A D VA+KK+ + + RE+ ++
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKR------AYRELVLMKC 79
Query: 73 FDHPSIVNVKEVV-----MDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLL 127
+H +I+ + V +++ VY+VME M+ +L +++ + L+ Q+L
Sbjct: 80 VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQ---MELDHERMSYLLYQML 136
Query: 128 EGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSP--LKPYTSLVVTLWYRA 185
G+K+LH ++HRDLK SN+++ + LKI DFG++R G+ + PY VVT +YRA
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPY---VVTRYYRA 193
Query: 186 PELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGL 245
PE++LG Y VD+WSVGCIM E++ LF GT +DQ +K+ + LGTP+ L
Sbjct: 194 PEVILGM-GYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKL 252
Query: 246 SELPGAKANFAKQP----YNLLRKRFPAASFTG----SPVLSESGFDLLNRLLTYDPEKR 297
P + +P Y+ K FP F + + + DLL+++L D KR
Sbjct: 253 Q--PTVRTYVENRPKYAGYS-FEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKR 309
Query: 298 ITVDDALNH----YWFH----EVPLPKSKD 319
I+VD+AL H W+ E P PK D
Sbjct: 310 ISVDEALQHPYINVWYDPSEAEAPPPKIPD 339
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 152 bits (385), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 107/330 (32%), Positives = 167/330 (50%), Gaps = 39/330 (11%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
++ L I G GIV A D VA+KK+ + + RE+ ++
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKR------AYRELVLMKV 79
Query: 73 FDHPSIVNVKEVV-----MDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLL 127
+H +I+ + V +++ VY+VME M+ +L +++ + L+ Q+L
Sbjct: 80 VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQ---MELDHERMSYLLYQML 136
Query: 128 EGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSP--LKPYTSLVVTLWYRA 185
G+K+LH ++HRDLK SN+++ + LKI DFG++R G+ + PY VVT +YRA
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPY---VVTRYYRA 193
Query: 186 PELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGL 245
PE++LG Y VD+WSVGCIM E++ LF GT +DQ +K+ + LGTP+ L
Sbjct: 194 PEVILGM-GYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKL 252
Query: 246 SELPGAKANFAKQP----YNLLRKRFPAASFTG----SPVLSESGFDLLNRLLTYDPEKR 297
P + +P Y+ K FP F + + + DLL+++L D KR
Sbjct: 253 Q--PTVRTYVENRPKYAGYS-FEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKR 309
Query: 298 ITVDDALNH----YWFH----EVPLPKSKD 319
I+VD+AL H W+ E P PK D
Sbjct: 310 ISVDEALQHPYINVWYDPSEAEAPPPKIPD 339
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 152 bits (384), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 107/330 (32%), Positives = 167/330 (50%), Gaps = 39/330 (11%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
++ L I G GIV A D VA+KK+ + + RE+ ++
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKR------AYRELVLMKC 79
Query: 73 FDHPSIVNVKEVV-----MDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLL 127
+H +I+ + V +++ VY+VME M+ +L +++ + L+ Q+L
Sbjct: 80 VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQ---MELDHERMSYLLYQML 136
Query: 128 EGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSP--LKPYTSLVVTLWYRA 185
G+K+LH ++HRDLK SN+++ + LKI DFG++R G+ + PY VVT +YRA
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPY---VVTRYYRA 193
Query: 186 PELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGL 245
PE++LG Y VD+WSVGCIM E++ LF GT +DQ +K+ + LGTP+ L
Sbjct: 194 PEVILGM-GYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKL 252
Query: 246 SELPGAKANFAKQP----YNLLRKRFPAASFTG----SPVLSESGFDLLNRLLTYDPEKR 297
P + +P Y+ K FP F + + + DLL+++L D KR
Sbjct: 253 Q--PTVRTYVENRPKYAGYS-FEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKR 309
Query: 298 ITVDDALNH----YWFH----EVPLPKSKD 319
I+VD+AL H W+ E P PK D
Sbjct: 310 ISVDEALQHPYINVWYDPSEAEAPPPKIPD 339
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 152 bits (383), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 107/330 (32%), Positives = 167/330 (50%), Gaps = 39/330 (11%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
++ L I G GIV A D VA+KK+ + + RE+ ++
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKR------AYRELVLMKC 79
Query: 73 FDHPSIVNVKEVV-----MDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLL 127
+H +I+ + V +++ VY+VME M+ +L + ++ + L+ Q+L
Sbjct: 80 VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANL---CQVIQMELDHERMSYLLYQML 136
Query: 128 EGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSP--LKPYTSLVVTLWYRA 185
G+K+LH ++HRDLK SN+++ + LKI DFG++R G+ + PY VVT +YRA
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPY---VVTRYYRA 193
Query: 186 PELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGL 245
PE++LG Y VD+WSVGCIM E++ LF GT +DQ +K+ + LGTP+ L
Sbjct: 194 PEVILGM-GYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKL 252
Query: 246 SELPGAKANFAKQP----YNLLRKRFPAASFTG----SPVLSESGFDLLNRLLTYDPEKR 297
P + +P Y+ K FP F + + + DLL+++L D KR
Sbjct: 253 Q--PTVRTYVENRPKYAGYS-FEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKR 309
Query: 298 ITVDDALNH----YWFH----EVPLPKSKD 319
I+VD+AL H W+ E P PK D
Sbjct: 310 ISVDEALQHPYINVWYDPSEAEAPPPKIPD 339
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 151 bits (382), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 107/330 (32%), Positives = 166/330 (50%), Gaps = 39/330 (11%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
++ L I G GIV A D VA+KK+ + + RE+ ++
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKR------AYRELVLMKC 79
Query: 73 FDHPSIVNVKEVV-----MDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLL 127
+H +I+ + V +++ VY+VME M+ +L + ++ + L+ Q+L
Sbjct: 80 VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANL---CQVIQMELDHERMSYLLYQML 136
Query: 128 EGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSP--LKPYTSLVVTLWYRA 185
G+K+LH ++HRDLK SN+++ + LKI DFG++R G+ + PY VVT +YRA
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPY---VVTRYYRA 193
Query: 186 PELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGL 245
PE++LG Y VD+WSVGCIM E++ LF GT +DQ +K+ + LGTP L
Sbjct: 194 PEVILGM-GYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKL 252
Query: 246 SELPGAKANFAKQP----YNLLRKRFPAASFTG----SPVLSESGFDLLNRLLTYDPEKR 297
P + +P Y+ K FP F + + + DLL+++L D KR
Sbjct: 253 Q--PTVRTYVENRPKYAGYS-FEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKR 309
Query: 298 ITVDDALNH----YWFH----EVPLPKSKD 319
I+VD+AL H W+ E P PK D
Sbjct: 310 ISVDEALQHPYINVWYDPSEAEAPPPKIPD 339
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 151 bits (382), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 107/330 (32%), Positives = 166/330 (50%), Gaps = 39/330 (11%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
++ L I G GIV A D VA+KK+ + + RE+ ++
Sbjct: 27 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKR------AYRELVLMKC 80
Query: 73 FDHPSIVNVKEVV-----MDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLL 127
+H +I+ + V +++ VY+VME M+ +L + ++ + L+ Q+L
Sbjct: 81 VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANL---CQVIQMELDHERMSYLLYQML 137
Query: 128 EGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSP--LKPYTSLVVTLWYRA 185
G+K+LH ++HRDLK SN+++ + LKI DFG++R G+ + PY VVT +YRA
Sbjct: 138 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPY---VVTRYYRA 194
Query: 186 PELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGL 245
PE++LG Y VD+WSVGCIM E++ LF GT +DQ +K+ + LGTP L
Sbjct: 195 PEVILGM-GYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKL 253
Query: 246 SELPGAKANFAKQP----YNLLRKRFPAASFTG----SPVLSESGFDLLNRLLTYDPEKR 297
P + +P Y+ K FP F + + + DLL+++L D KR
Sbjct: 254 Q--PTVRTYVENRPKYAGYS-FEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKR 310
Query: 298 ITVDDALNH----YWFH----EVPLPKSKD 319
I+VD+AL H W+ E P PK D
Sbjct: 311 ISVDEALQHPYINVWYDPSEAEAPPPKIPD 340
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 151 bits (381), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 107/330 (32%), Positives = 166/330 (50%), Gaps = 39/330 (11%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
++ L I G GIV A D VA+KK+ + + RE+ ++
Sbjct: 20 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKR------AYRELVLMKC 73
Query: 73 FDHPSIVNVKEVV-----MDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLL 127
+H +I+ + V +++ VY+VME M+ +L + ++ + L+ Q+L
Sbjct: 74 VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANL---CQVIQMELDHERMSYLLYQML 130
Query: 128 EGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSP--LKPYTSLVVTLWYRA 185
G+K+LH ++HRDLK SN+++ + LKI DFG++R G+ + PY VVT +YRA
Sbjct: 131 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPY---VVTRYYRA 187
Query: 186 PELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGL 245
PE++LG Y VD+WSVGCIM E++ K LF G +DQ +K+ + LGTP L
Sbjct: 188 PEVILGM-GYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL 246
Query: 246 SELPGAKANFAKQP----YNLLRKRFPAASFTG----SPVLSESGFDLLNRLLTYDPEKR 297
P + +P Y+ K FP F + + + DLL+++L D KR
Sbjct: 247 Q--PTVRTYVENRPKYAGYS-FEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKR 303
Query: 298 ITVDDALNH----YWFH----EVPLPKSKD 319
I+VD+AL H W+ E P PK D
Sbjct: 304 ISVDEALQHPYINVWYDPSEAEAPPPKIPD 333
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 151 bits (381), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 107/330 (32%), Positives = 166/330 (50%), Gaps = 39/330 (11%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
++ L I G GIV A D VA+KK+ + + RE+ ++
Sbjct: 31 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKR------AYRELVLMKC 84
Query: 73 FDHPSIVNVKEVV-----MDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLL 127
+H +I+ + V +++ VY+VME M+ +L + ++ + L+ Q+L
Sbjct: 85 VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANL---CQVIQMELDHERMSYLLYQML 141
Query: 128 EGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSP--LKPYTSLVVTLWYRA 185
G+K+LH ++HRDLK SN+++ + LKI DFG++R G+ + PY VVT +YRA
Sbjct: 142 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPY---VVTRYYRA 198
Query: 186 PELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGL 245
PE++LG Y VD+WSVGCIM E++ K LF G +DQ +K+ + LGTP L
Sbjct: 199 PEVILGM-GYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL 257
Query: 246 SELPGAKANFAKQP----YNLLRKRFPAASFTG----SPVLSESGFDLLNRLLTYDPEKR 297
P + +P Y+ K FP F + + + DLL+++L D KR
Sbjct: 258 Q--PTVRTYVENRPKYAGYS-FEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKR 314
Query: 298 ITVDDALNH----YWFH----EVPLPKSKD 319
I+VD+AL H W+ E P PK D
Sbjct: 315 ISVDEALQHPYINVWYDPSEAEAPPPKIPD 344
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 150 bits (380), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 106/328 (32%), Positives = 164/328 (50%), Gaps = 35/328 (10%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
++ L I G GIV A D VA+KK+ + + RE+ ++
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKR------AYRELVLMKC 79
Query: 73 FDHPSIVNVKEVV-----MDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLL 127
+H +I+ + V +++ VY+VME M+ +L + ++ + L+ Q+L
Sbjct: 80 VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANL---CQVIQMELDHERMSYLLYQML 136
Query: 128 EGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPE 187
G+K+LH ++HRDLK SN+++ + LKI DFG++R G+ T VVT +YRAPE
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFM-MTPEVVTRYYRAPE 195
Query: 188 LLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSE 247
++LG Y VD+WSVGCIM E++ LF GT +DQ +K+ + LGTP L
Sbjct: 196 VILGM-GYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQ- 253
Query: 248 LPGAKANFAKQP----YNLLRKRFPAASFTG----SPVLSESGFDLLNRLLTYDPEKRIT 299
P + +P Y+ K FP F + + + DLL+++L D KRI+
Sbjct: 254 -PTVRTYVENRPKYAGYS-FEKLFPDVLFPADSEHNALKASQARDLLSKMLVIDASKRIS 311
Query: 300 VDDALNH----YWFH----EVPLPKSKD 319
VD+AL H W+ E P PK D
Sbjct: 312 VDEALQHPYINVWYDPSEAEAPPPKIPD 339
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 150 bits (380), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 106/330 (32%), Positives = 166/330 (50%), Gaps = 39/330 (11%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
++ L I G GIV A D VA+KK+ + + RE+ ++
Sbjct: 26 YQNLKPIGSGAQGIVVAAYDAILERNVAIKKLSRPFQNQTHAKR------AYRELVLMKV 79
Query: 73 FDHPSIVNVKEVV-----MDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLL 127
+H +I+ + V +++ VY+VME M+ +L +++ + L+ Q+L
Sbjct: 80 VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQ---MELDHERMSYLLYQML 136
Query: 128 EGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSP--LKPYTSLVVTLWYRA 185
G+K+LH ++HRDLK SN+++ + LKI DFG++R G+ + PY VVT +YRA
Sbjct: 137 VGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPY---VVTRYYRA 193
Query: 186 PELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGL 245
PE++LG Y VD+WSVG IM E++ LF GT +DQ +K+ + LGTP+ L
Sbjct: 194 PEVILGM-GYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKL 252
Query: 246 SELPGAKANFAKQP----YNLLRKRFPAASFTG----SPVLSESGFDLLNRLLTYDPEKR 297
P + +P Y+ K FP F + + + DLL+++L D KR
Sbjct: 253 Q--PTVRTYVENRPKYAGYS-FEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKR 309
Query: 298 ITVDDALNH----YWFH----EVPLPKSKD 319
I+VD+AL H W+ E P PK D
Sbjct: 310 ISVDEALQHPYINVWYDPSEAEAPPPKIPD 339
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 150 bits (379), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 104/327 (31%), Positives = 161/327 (49%), Gaps = 33/327 (10%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
++ L I G GIV A D VA+KK+ + + RE+ ++
Sbjct: 28 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKR------AYRELVLMKC 81
Query: 73 FDHPSIVNVKEVV-----MDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLL 127
+H +I+ + V +++ VY+VME M+ +L + ++ + L+ Q+L
Sbjct: 82 VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANL---CQVIQMELDHERMSYLLYQML 138
Query: 128 EGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPE 187
G+K+LH ++HRDLK SN+++ + LKI DFG++R G+ VVT +YRAPE
Sbjct: 139 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFM-MVPFVVTRYYRAPE 197
Query: 188 LLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSE 247
++LG Y VD+WSVGCIM E++ LF GT +DQ +K+ + LGTP L
Sbjct: 198 VILGM-GYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQ- 255
Query: 248 LPGAKANFAKQPYNL---LRKRFPAASFTG----SPVLSESGFDLLNRLLTYDPEKRITV 300
P + +P K FP F + + + DLL+++L D KRI+V
Sbjct: 256 -PTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISV 314
Query: 301 DDALNH----YWFH----EVPLPKSKD 319
D+AL H W+ E P PK D
Sbjct: 315 DEALQHPYINVWYDPSEAEAPPPKIPD 341
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 106/330 (32%), Positives = 166/330 (50%), Gaps = 39/330 (11%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
++ L I G GIV A D VA+KK+ + + RE+ ++
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKR------AYRELVLMKV 79
Query: 73 FDHPSIVNVKEVV-----MDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLL 127
+H +I+ + V +++ VY+VME M+ +L +++ + L+ Q+L
Sbjct: 80 VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQ---MELDHERMSYLLYQML 136
Query: 128 EGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSP--LKPYTSLVVTLWYRA 185
G+K+LH ++HRDLK SN+++ + LKI DFG++R G+ + PY VVT +YRA
Sbjct: 137 VGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPY---VVTRYYRA 193
Query: 186 PELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGL 245
PE++LG Y VD+WSVG IM E++ LF GT +DQ +K+ + LGTP+ L
Sbjct: 194 PEVILGM-GYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKL 252
Query: 246 SELPGAKANFAKQP----YNLLRKRFPAASFTG----SPVLSESGFDLLNRLLTYDPEKR 297
P + +P Y+ K FP F + + + DLL+++L D KR
Sbjct: 253 Q--PTVRTYVENRPKYAGYS-FEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKR 309
Query: 298 ITVDDALNH----YWFH----EVPLPKSKD 319
I+VD+AL H W+ E P PK D
Sbjct: 310 ISVDEALQHPYINVWYDPSEAEAPPPKIPD 339
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 148 bits (373), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 106/330 (32%), Positives = 166/330 (50%), Gaps = 39/330 (11%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
++ L I G GIV A D VA+KK+ + + RE+ ++
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKR------AYRELVLMKC 79
Query: 73 FDHPSIVNVKEVV-----MDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLL 127
+H +I+ + V +++ VY+VME M+ +L + ++ + L+ Q+L
Sbjct: 80 VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANL---CQVIQMELDHERMSYLLYQML 136
Query: 128 EGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSP--LKPYTSLVVTLWYRA 185
G+K+LH ++HRDLK SN+++ + LKI DFG++R G+ ++P VVT +YRA
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPE---VVTRYYRA 193
Query: 186 PELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGL 245
PE++LG Y VD+WSVGCIM E++ K LF G +DQ +K+ + LGTP L
Sbjct: 194 PEVILGM-GYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL 252
Query: 246 SELPGAKANFAKQP----YNLLRKRFPAASFTG----SPVLSESGFDLLNRLLTYDPEKR 297
P + +P Y+ K FP F + + + DLL+++L D KR
Sbjct: 253 Q--PTVRTYVENRPKYAGYS-FEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKR 309
Query: 298 ITVDDALNH----YWFH----EVPLPKSKD 319
I+VD+AL H W+ E P PK D
Sbjct: 310 ISVDEALQHPYINVWYDPSEAEAPPPKIPD 339
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 147 bits (372), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 106/330 (32%), Positives = 166/330 (50%), Gaps = 39/330 (11%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
++ L I G GIV A D VA+KK+ + + RE+ ++
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKR------AYRELVLMKC 79
Query: 73 FDHPSIVNVKEVV-----MDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLL 127
+H +I+ + V +++ VY+VME M+ +L + ++ + L+ Q+L
Sbjct: 80 VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANL---CQVIQMELDHERMSYLLYQML 136
Query: 128 EGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSP--LKPYTSLVVTLWYRA 185
G+K+LH ++HRDLK SN+++ + LKI DFG++R G+ ++P VVT +YRA
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPE---VVTRYYRA 193
Query: 186 PELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGL 245
PE++LG Y VD+WSVGCIM E++ K LF G +DQ +K+ + LGTP L
Sbjct: 194 PEVILGM-GYKENVDIWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPAFMKKL 252
Query: 246 SELPGAKANFAKQP----YNLLRKRFPAASFTG----SPVLSESGFDLLNRLLTYDPEKR 297
P + +P Y+ K FP F + + + DLL+++L D KR
Sbjct: 253 Q--PTVRNYVENRPKYAGYS-FEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKR 309
Query: 298 ITVDDALNH----YWFH----EVPLPKSKD 319
I+VD+AL H W+ E P PK D
Sbjct: 310 ISVDEALQHPYINVWYDPSEAEAPPPKIPD 339
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 142 bits (357), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 102/325 (31%), Positives = 165/325 (50%), Gaps = 39/325 (12%)
Query: 11 FEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINI- 69
F+ E++ +GT+G V ++K +G VA+KKV + P RE+ I
Sbjct: 25 FQVERM--AGQGTFGTVQLGKEKSTGMSVAIKKVIQD------------PRFRNRELQIM 70
Query: 70 --LLSFDHPSIVNVKEVVMD----DHDSVYM--VMEYMEHDLKWLMESMKQPFSTSE--- 118
L HP+IV ++ D +Y+ VMEY+ L + +
Sbjct: 71 QDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPIL 130
Query: 119 VKCLMLQLLEGVKYLH--DNWVLHRDLKTSNLLLNN-QGVLKICDFGMSRQYGSPLKPYT 175
+K + QL+ + LH V HRD+K N+L+N G LK+CDFG +++ SP +P
Sbjct: 131 IKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKL-SPSEPNV 189
Query: 176 SLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLG 235
+ + + +YRAPEL+ G + Y+TAVD+WSVGCI AE++ +P+F G Q+ +I + LG
Sbjct: 190 AYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLG 249
Query: 236 TPTETIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSES--GFDLLNRLLTYD 293
P+ + L+ ++ YN K P ++ L ++ +DLL+ LL Y
Sbjct: 250 CPSREVLRKLN-----PSHTDVDLYN--SKGIPWSNVFSDHSLKDAKEAYDLLSALLQYL 302
Query: 294 PEKRITVDDALNHYWFHEVPLPKSK 318
PE+R+ +AL H +F E+ P +K
Sbjct: 303 PEERMKPYEALCHPYFDELHDPATK 327
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 141 bits (356), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 100/338 (29%), Positives = 169/338 (50%), Gaps = 74/338 (21%)
Query: 19 ISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSI 78
+ G++GIV D +SG+ ALKKV + K RE++I+ DH +I
Sbjct: 15 LGTGSFGIVCEVFDIESGKRFALKKVLQDPRYKN------------RELDIMKVLDHVNI 62
Query: 79 VNV-----------------------------------KEVVMDDHDSVYM--VMEYMEH 101
+ + K V+++ + Y+ +MEY+
Sbjct: 63 IKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPD 122
Query: 102 DLKWLMESM---KQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQ-GVLK 157
L +++S + + + + QL V ++H + HRD+K NLL+N++ LK
Sbjct: 123 TLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKDNTLK 182
Query: 158 ICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPL 217
+CDFG +++ P +P + + + +YRAPEL+LGA +Y+ ++D+WS+GC+ EL+ KPL
Sbjct: 183 LCDFGSAKKL-IPSEPSVAXICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPL 241
Query: 218 FSGTTEVDQIDKIFKTLGTPTET----IWPGLSEL--PGAKANFAKQPYNLLRKRFPAAS 271
FSG T +DQ+ +I + +GTPT+ + P +E+ P KA RK P
Sbjct: 242 FSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKD-------WRKILPE-- 292
Query: 272 FTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWF 309
G+P L+ DLL ++L Y+P+ RI +A+ H +F
Sbjct: 293 --GTPSLA---IDLLEQILRYEPDLRINPYEAMAHPFF 325
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 89/302 (29%), Positives = 143/302 (47%), Gaps = 49/302 (16%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
++++ K+ G YG V +DK +G A+K +K K + L E+ +L
Sbjct: 23 YQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIK-----KSSVTTTSNSGALLDEVAVLKQ 77
Query: 73 FDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKY 132
DHP+I+ + E +D + Y+VME + ++Q FS + +M Q+L G Y
Sbjct: 78 LDHPNIMKLYEF-FEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTY 136
Query: 133 LHDNWVLHRDLKTSNLLLNNQ---GVLKICDFGMSRQY--GSPLKPYTSLVVTLWYRAPE 187
LH + ++HRDLK NLLL ++ ++KI DFG+S + G +K T +Y APE
Sbjct: 137 LHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLG---TAYYIAPE 193
Query: 188 LLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSE 247
+L KKY D+WS G I+ LL P F G T+ + + ++
Sbjct: 194 VL--RKKYDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRV----------------- 234
Query: 248 LPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHY 307
K F+ P + + +S+ L+ +LTY+P KRI+ ++ALNH
Sbjct: 235 ---EKGKFSFDPPDWTQ-------------VSDEAKQLVKLMLTYEPSKRISAEEALNHP 278
Query: 308 WF 309
W
Sbjct: 279 WI 280
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 96/297 (32%), Positives = 146/297 (49%), Gaps = 49/297 (16%)
Query: 19 ISEGTYGIVYRARDKKSGEIVALKKV-KMNVGRKEDCLEYGFPISSLREINILLSFDHPS 77
+ +G++G V +DK +G+ A+K + K V +K D S LRE+ +L DHP+
Sbjct: 40 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTD------KESLLREVQLLKQLDHPN 93
Query: 78 IVNVKEVVMDDHDSVYMVME-YMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDN 136
I+ + E +D Y+V E Y +L + S K+ FS + ++ Q+L G+ Y+H N
Sbjct: 94 IMKLYEF-FEDKGYFYLVGEVYTGGELFDEIISRKR-FSEVDAARIIRQVLSGITYMHKN 151
Query: 137 WVLHRDLKTSNLLLNNQ---GVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGAK 193
++HRDLK NLLL ++ ++I DFG+S + + K + T +Y APE+L G
Sbjct: 152 KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS-KKMKDKIGTAYYIAPEVLHGT- 209
Query: 194 KYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGAKA 253
Y D+WS G I+ LL+ P F+G E D + K+ K T ELP K
Sbjct: 210 -YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYT---------FELPQWKK 259
Query: 254 NFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFH 310
+SES DL+ ++LTY P RI+ DAL+H W
Sbjct: 260 ------------------------VSESAKDLIRKMLTYVPSMRISARDALDHEWIQ 292
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 118 bits (296), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 96/297 (32%), Positives = 146/297 (49%), Gaps = 49/297 (16%)
Query: 19 ISEGTYGIVYRARDKKSGEIVALKKV-KMNVGRKEDCLEYGFPISSLREINILLSFDHPS 77
+ +G++G V +DK +G+ A+K + K V +K D S LRE+ +L DHP+
Sbjct: 58 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTD------KESLLREVQLLKQLDHPN 111
Query: 78 IVNVKEVVMDDHDSVYMVME-YMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDN 136
I+ + E +D Y+V E Y +L + S K+ FS + ++ Q+L G+ Y+H N
Sbjct: 112 IMKLYEF-FEDKGYFYLVGEVYTGGELFDEIISRKR-FSEVDAARIIRQVLSGITYMHKN 169
Query: 137 WVLHRDLKTSNLLLNNQ---GVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGAK 193
++HRDLK NLLL ++ ++I DFG+S + + K + T +Y APE+L G
Sbjct: 170 KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS-KKMKDKIGTAYYIAPEVLHGT- 227
Query: 194 KYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGAKA 253
Y D+WS G I+ LL+ P F+G E D + K+ K T ELP K
Sbjct: 228 -YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYT---------FELPQWKK 277
Query: 254 NFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFH 310
+SES DL+ ++LTY P RI+ DAL+H W
Sbjct: 278 ------------------------VSESAKDLIRKMLTYVPSMRISARDALDHEWIQ 310
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 118 bits (296), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 89/302 (29%), Positives = 143/302 (47%), Gaps = 49/302 (16%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
++++ K+ G YG V +DK +G A+K +K K + L E+ +L
Sbjct: 6 YQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIK-----KSSVTTTSNSGALLDEVAVLKQ 60
Query: 73 FDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKY 132
DHP+I+ + E +D + Y+VME + ++Q FS + +M Q+L G Y
Sbjct: 61 LDHPNIMKLYEF-FEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTY 119
Query: 133 LHDNWVLHRDLKTSNLLLNNQ---GVLKICDFGMSRQY--GSPLKPYTSLVVTLWYRAPE 187
LH + ++HRDLK NLLL ++ ++KI DFG+S + G +K T +Y APE
Sbjct: 120 LHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLG---TAYYIAPE 176
Query: 188 LLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSE 247
+L KKY D+WS G I+ LL P F G T+ + + ++
Sbjct: 177 VL--RKKYDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRV----------------- 217
Query: 248 LPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHY 307
K F+ P + + +S+ L+ +LTY+P KRI+ ++ALNH
Sbjct: 218 ---EKGKFSFDPPDWTQ-------------VSDEAKQLVKLMLTYEPSKRISAEEALNHP 261
Query: 308 WF 309
W
Sbjct: 262 WI 263
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 118 bits (296), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 96/297 (32%), Positives = 146/297 (49%), Gaps = 49/297 (16%)
Query: 19 ISEGTYGIVYRARDKKSGEIVALKKV-KMNVGRKEDCLEYGFPISSLREINILLSFDHPS 77
+ +G++G V +DK +G+ A+K + K V +K D S LRE+ +L DHP+
Sbjct: 57 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTD------KESLLREVQLLKQLDHPN 110
Query: 78 IVNVKEVVMDDHDSVYMVME-YMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDN 136
I+ + E +D Y+V E Y +L + S K+ FS + ++ Q+L G+ Y+H N
Sbjct: 111 IMKLYEF-FEDKGYFYLVGEVYTGGELFDEIISRKR-FSEVDAARIIRQVLSGITYMHKN 168
Query: 137 WVLHRDLKTSNLLLNNQ---GVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGAK 193
++HRDLK NLLL ++ ++I DFG+S + + K + T +Y APE+L G
Sbjct: 169 KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS-KKMKDKIGTAYYIAPEVLHGT- 226
Query: 194 KYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGAKA 253
Y D+WS G I+ LL+ P F+G E D + K+ K T ELP K
Sbjct: 227 -YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYT---------FELPQWKK 276
Query: 254 NFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFH 310
+SES DL+ ++LTY P RI+ DAL+H W
Sbjct: 277 ------------------------VSESAKDLIRKMLTYVPSMRISARDALDHEWIQ 309
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 118 bits (295), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 96/297 (32%), Positives = 146/297 (49%), Gaps = 49/297 (16%)
Query: 19 ISEGTYGIVYRARDKKSGEIVALKKV-KMNVGRKEDCLEYGFPISSLREINILLSFDHPS 77
+ +G++G V +DK +G+ A+K + K V +K D S LRE+ +L DHP+
Sbjct: 34 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTD------KESLLREVQLLKQLDHPN 87
Query: 78 IVNVKEVVMDDHDSVYMVME-YMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDN 136
I+ + E +D Y+V E Y +L + S K+ FS + ++ Q+L G+ Y+H N
Sbjct: 88 IMKLYEF-FEDKGYFYLVGEVYTGGELFDEIISRKR-FSEVDAARIIRQVLSGITYMHKN 145
Query: 137 WVLHRDLKTSNLLLNNQ---GVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGAK 193
++HRDLK NLLL ++ ++I DFG+S + + K + T +Y APE+L G
Sbjct: 146 KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS-KKMKDKIGTAYYIAPEVLHGT- 203
Query: 194 KYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGAKA 253
Y D+WS G I+ LL+ P F+G E D + K+ K T ELP K
Sbjct: 204 -YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYT---------FELPQWKK 253
Query: 254 NFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFH 310
+SES DL+ ++LTY P RI+ DAL+H W
Sbjct: 254 ------------------------VSESAKDLIRKMLTYVPSMRISARDALDHEWIQ 286
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/297 (32%), Positives = 143/297 (48%), Gaps = 49/297 (16%)
Query: 19 ISEGTYGIVYRARDKKSGEIVALKKV-KMNVGRKEDCLEYGFPISSLREINILLSFDHPS 77
+ +G++G V +DK +G+ A+K + K V +K D S LRE+ +L DHP+
Sbjct: 34 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTD------KESLLREVQLLKQLDHPN 87
Query: 78 IVNVKEVVMDDHDSVYMVME-YMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDN 136
I + E +D Y+V E Y +L + S K+ FS + ++ Q+L G+ Y H N
Sbjct: 88 IXKLYEF-FEDKGYFYLVGEVYTGGELFDEIISRKR-FSEVDAARIIRQVLSGITYXHKN 145
Query: 137 WVLHRDLKTSNLLLNNQ---GVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGAK 193
++HRDLK NLLL ++ ++I DFG+S + + K + T +Y APE+L G
Sbjct: 146 KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS-KKXKDKIGTAYYIAPEVLHGT- 203
Query: 194 KYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGAKA 253
Y D+WS G I+ LL+ P F+G E D + K+ K T ELP K
Sbjct: 204 -YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYT---------FELPQWKK 253
Query: 254 NFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFH 310
+SES DL+ + LTY P RI+ DAL+H W
Sbjct: 254 ------------------------VSESAKDLIRKXLTYVPSXRISARDALDHEWIQ 286
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 115 bits (289), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 105/340 (30%), Positives = 155/340 (45%), Gaps = 50/340 (14%)
Query: 10 VFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINI 69
+ +E L I +G++G V +A D K + VALK V+ E F + EI I
Sbjct: 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRN---------EKRFHRQAAEEIRI 146
Query: 70 LLSF---DHPSIVNVKEVVMDD--HDSVYMVMEYMEHDLKWLMESMK-QPFSTSEVKCLM 123
L D + +NV ++ + + + M E + +L L++ K Q FS V+
Sbjct: 147 LEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFA 206
Query: 124 LQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGV--LKICDFGMSRQYGSPLKPYTSLVVTL 181
+L+ + LH N ++H DLK N+LL QG +K+ DFG S + YT + +
Sbjct: 207 HSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCY--EHQRVYTX-IQSR 263
Query: 182 WYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETI 241
+YRAPE++LGA+ Y +DMWS+GCI+AELL PL G E DQ+ + + LG P++ +
Sbjct: 264 FYRAPEVILGAR-YGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKL 322
Query: 242 WPGLSELPGAKANFAKQPYN--------------LLRKRFPAASFTGSPVLSESG----- 282
L AK + + Y L R G P E G
Sbjct: 323 ---LDASKRAKNFVSXKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKG 379
Query: 283 ------FDLLNRLLTYDPEKRITVDDALNHYWFHEVPLPK 316
D L + L +DP R+T AL H W LPK
Sbjct: 380 CDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWLRRR-LPK 418
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 115 bits (288), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 102/333 (30%), Positives = 152/333 (45%), Gaps = 49/333 (14%)
Query: 10 VFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINI 69
+ +E L I +G++G V +A D K + VALK V+ E F + EI I
Sbjct: 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRN---------EKRFHRQAAEEIRI 146
Query: 70 LLSF---DHPSIVNVKEVVMDD--HDSVYMVMEYMEHDLKWLMESMK-QPFSTSEVKCLM 123
L D + +NV ++ + + + M E + +L L++ K Q FS V+
Sbjct: 147 LEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFA 206
Query: 124 LQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGV--LKICDFGMSRQYGSPLKPYTSLVVTL 181
+L+ + LH N ++H DLK N+LL QG +K+ DFG S + YT + +
Sbjct: 207 HSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCY--EHQRVYTX-IQSR 263
Query: 182 WYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETI 241
+YRAPE++LGA+ Y +DMWS+GCI+AELL PL G E DQ+ + + LG P++ +
Sbjct: 264 FYRAPEVILGAR-YGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKL 322
Query: 242 WPGLSELPGAKANFAKQPYN--------------LLRKRFPAASFTGSPVLSESG----- 282
L AK + + Y L R G P E G
Sbjct: 323 ---LDASKRAKNFVSXKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKG 379
Query: 283 ------FDLLNRLLTYDPEKRITVDDALNHYWF 309
D L + L +DP R+T AL H W
Sbjct: 380 CDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWL 412
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 114 bits (286), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 112/206 (54%), Gaps = 12/206 (5%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
F L +I G++G VY ARD ++ E+VA+KK+ + + + + ++E+ L
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQ-----DIIKEVRFLQK 110
Query: 73 FDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKY 132
HP+ + + + +H + ++VMEY L+E K+P E+ + L+G+ Y
Sbjct: 111 LRHPNTIQYRGCYLREH-TAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAY 169
Query: 133 LHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGA 192
LH + ++HRD+K N+LL+ G++K+ DFG + S + P V T ++ APE++L
Sbjct: 170 LHSHNMIHRDVKAGNILLSEPGLVKLGDFGSA----SIMAPANXFVGTPYWMAPEVILAM 225
Query: 193 K--KYSTAVDMWSVGCIMAELLAKKP 216
+Y VD+WS+G EL +KP
Sbjct: 226 DEGQYDGKVDVWSLGITCIELAERKP 251
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 112/206 (54%), Gaps = 12/206 (5%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
F L +I G++G VY ARD ++ E+VA+KK+ + + + + ++E+ L
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQ-----DIIKEVRFLQK 71
Query: 73 FDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKY 132
HP+ + + + +H + ++VMEY L+E K+P E+ + L+G+ Y
Sbjct: 72 LRHPNTIQYRGCYLREH-TAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAY 130
Query: 133 LHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGA 192
LH + ++HRD+K N+LL+ G++K+ DFG + S + P V T ++ APE++L
Sbjct: 131 LHSHNMIHRDVKAGNILLSEPGLVKLGDFGSA----SIMAPANXFVGTPYWMAPEVILAM 186
Query: 193 K--KYSTAVDMWSVGCIMAELLAKKP 216
+Y VD+WS+G EL +KP
Sbjct: 187 DEGQYDGKVDVWSLGITCIELAERKP 212
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 105/345 (30%), Positives = 152/345 (44%), Gaps = 60/345 (17%)
Query: 10 VFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINI 69
+ +E L I +G +G V +A D K + VALK V+ E F + EI I
Sbjct: 96 AYRYEVLKVIGKGXFGQVVKAYDHKVHQHVALKMVRN---------EKRFHRQAAEEIRI 146
Query: 70 LLSF---DHPSIVNVKEVVMDD--HDSVYMVMEYMEHDLKWLMESMK-QPFSTSEVKCLM 123
L D + +NV ++ + + + M E + +L L++ K Q FS V+
Sbjct: 147 LEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFA 206
Query: 124 LQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGV--LKICDFGMS-----RQYGSPLKPYTS 176
+L+ + LH N ++H DLK N+LL QG +K+ DFG S R Y
Sbjct: 207 HSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVY--------X 258
Query: 177 LVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGT 236
+ + +YRAPE++LGA+ Y +DMWS+GCI+AELL PL G E DQ+ + + LG
Sbjct: 259 XIQSRFYRAPEVILGAR-YGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGM 317
Query: 237 PTETIWPGLSELPGAKANFAKQPYN--------------LLRKRFPAASFTGSPVLSESG 282
P + + L AK + + Y L R G P E G
Sbjct: 318 PXQKL---LDASKRAKNFVSXKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWG 374
Query: 283 -----------FDLLNRLLTYDPEKRITVDDALNHYWFHEVPLPK 316
D L + L +DP R+T AL H W LPK
Sbjct: 375 NALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWLRRR-LPK 418
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 92/308 (29%), Positives = 148/308 (48%), Gaps = 56/308 (18%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSG---EIVALKKVKMNVGRKEDCLEYGFPISSLREINI 69
++++ K+ G YG V RDK + I ++K ++ LE E+ +
Sbjct: 39 YQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLE---------EVAV 89
Query: 70 LLSFDHPSIVNVKEVVMDDHDSVYMVME-YMEHDL-KWLMESMKQPFSTSEVKCLMLQLL 127
L DHP+I+ + + +D + Y+VME Y +L ++ MK F+ + ++ Q+L
Sbjct: 90 LKLLDHPNIMKLYDF-FEDKRNYYLVMECYKGGELFDEIIHRMK--FNEVDAAVIIKQVL 146
Query: 128 EGVKYLHDNWVLHRDLKTSNLLLNNQ---GVLKICDFGMSRQYGSPLKPYTSLVVTLWYR 184
GV YLH + ++HRDLK NLLL ++ ++KI DFG+S + + K + T +Y
Sbjct: 147 SGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQ-KKMKERLGTAYYI 205
Query: 185 APELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPG 244
APE+L KKY D+WS+G I+ LLA P F G T+ + + K+ K T W
Sbjct: 206 APEVL--RKKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKN 263
Query: 245 LSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDAL 304
+SE GAK DL+ ++L +D ++RI+ AL
Sbjct: 264 VSE--GAK-------------------------------DLIKQMLQFDSQRRISAQQAL 290
Query: 305 NHYWFHEV 312
H W E+
Sbjct: 291 EHPWIKEM 298
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/302 (30%), Positives = 137/302 (45%), Gaps = 45/302 (14%)
Query: 15 KLNKISEGTYGIVYRARDKKSGE---IVALKKVKMNVGRKEDCLEY--GFPISSLREINI 69
K+ K+ G YG V ++K I +KK + + GR D + F EI++
Sbjct: 40 KVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISL 99
Query: 70 LLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEG 129
L S DHP+I+ + +V +D Y+V E+ E + + F + +M Q+L G
Sbjct: 100 LKSLDHPNIIKLFDV-FEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSG 158
Query: 130 VKYLHDNWVLHRDLKTSNLLLNNQGVL---KICDFGMSRQYGSPLKPYTSLVVTLWYRAP 186
+ YLH + ++HRD+K N+LL N+ L KI DFG+S + K L T +Y AP
Sbjct: 159 ICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRL-GTAYYIAP 217
Query: 187 ELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLS 246
E+L KKY+ D+WS G IM LL P F G + D I K+ K
Sbjct: 218 EVL--KKKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEK-------------- 261
Query: 247 ELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNH 306
K F F +S+ +L+ +LTYD KR T ++ALN
Sbjct: 262 ----GKYYF---------------DFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNS 302
Query: 307 YW 308
W
Sbjct: 303 RW 304
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 110 bits (276), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 100/326 (30%), Positives = 158/326 (48%), Gaps = 46/326 (14%)
Query: 19 ISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSI 78
I +G++G V +A D+ E VA+K +K +K + + L +N + I
Sbjct: 43 IGKGSFGQVVKAYDRVEQEWVAIKIIK---NKKAFLNQAQIEVRLLELMNKHDTEMKYYI 99
Query: 79 VNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMK-QPFSTSEVKCLMLQLLEGVKYLH--D 135
V++K M + + +V E + ++L L+ + + S + + Q+ + +L +
Sbjct: 100 VHLKRHFMF-RNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPE 158
Query: 136 NWVLHRDLKTSNLLLNN--QGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGAK 193
++H DLK N+LL N + +KI DFG S Q G + + + +YR+PE+LLG
Sbjct: 159 LSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRI---YQXIQSRFYRSPEVLLGMP 215
Query: 194 KYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGAKA 253
Y A+DMWS+GCI+ E+ +PLFSG EVDQ++KI + LG P I L + P A+
Sbjct: 216 -YDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHI---LDQAPKARK 271
Query: 254 NFAKQP---YNLLRKRFPAASF---------------TGSP---VLSESGF--------- 283
F K P +NL + + + TG P ESG
Sbjct: 272 FFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFK 331
Query: 284 DLLNRLLTYDPEKRITVDDALNHYWF 309
DL+ R+L YDP+ RI AL H +F
Sbjct: 332 DLILRMLDYDPKTRIQPYYALQHSFF 357
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 110 bits (276), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 100/326 (30%), Positives = 158/326 (48%), Gaps = 46/326 (14%)
Query: 19 ISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSI 78
I +G++G V +A D+ E VA+K +K +K + + L +N + I
Sbjct: 62 IGKGSFGQVVKAYDRVEQEWVAIKIIK---NKKAFLNQAQIEVRLLELMNKHDTEMKYYI 118
Query: 79 VNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMK-QPFSTSEVKCLMLQLLEGVKYLH--D 135
V++K M + + +V E + ++L L+ + + S + + Q+ + +L +
Sbjct: 119 VHLKRHFMF-RNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPE 177
Query: 136 NWVLHRDLKTSNLLLNN--QGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGAK 193
++H DLK N+LL N + +KI DFG S Q G + + + +YR+PE+LLG
Sbjct: 178 LSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRI---YQXIQSRFYRSPEVLLGMP 234
Query: 194 KYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGAKA 253
Y A+DMWS+GCI+ E+ +PLFSG EVDQ++KI + LG P I L + P A+
Sbjct: 235 -YDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHI---LDQAPKARK 290
Query: 254 NFAKQP---YNLLRKRFPAASF---------------TGSP---VLSESGF--------- 283
F K P +NL + + + TG P ESG
Sbjct: 291 FFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFK 350
Query: 284 DLLNRLLTYDPEKRITVDDALNHYWF 309
DL+ R+L YDP+ RI AL H +F
Sbjct: 351 DLILRMLDYDPKTRIQPYYALQHSFF 376
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 136/250 (54%), Gaps = 27/250 (10%)
Query: 76 PSIVNVKEVVMDDHDSV-YMVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEGVKYL 133
P+IV + ++V D H ++ EY+ + D K L ++ + +++ + +LL+ + Y
Sbjct: 88 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTL----TDYDIRYYIYELLKALDYC 143
Query: 134 HDNWVLHRDLKTSNLLLNNQ-GVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGA 192
H ++HRD+K N++++++ L++ D+G++ Y P K Y V + +++ PELL+
Sbjct: 144 HSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFY-HPGKEYNVRVASRYFKGPELLVDL 202
Query: 193 KKYSTAVDMWSVGCIMAELLAKK-PLFSGTTEVDQIDKIFKTLGTPTETIW--------- 242
+ Y ++DMWS+GC+ A ++ +K P F G DQ+ KI K LGT ++
Sbjct: 203 QDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELD 262
Query: 243 PGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDD 302
P L L G +++P+ +F A ++S D L++LL YD ++R+T +
Sbjct: 263 PQLEALVGRH---SRKPW----LKFMNAD--NQHLVSPEAIDFLDKLLRYDHQERLTALE 313
Query: 303 ALNHYWFHEV 312
A+ H +F +V
Sbjct: 314 AMTHPYFQQV 323
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 136/250 (54%), Gaps = 27/250 (10%)
Query: 76 PSIVNVKEVVMDDHDSV-YMVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEGVKYL 133
P+IV + ++V D H ++ EY+ + D K L ++ + +++ + +LL+ + Y
Sbjct: 87 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTL----TDYDIRYYIYELLKALDYC 142
Query: 134 HDNWVLHRDLKTSNLLLNNQ-GVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGA 192
H ++HRD+K N++++++ L++ D+G++ Y P K Y V + +++ PELL+
Sbjct: 143 HSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFY-HPGKEYNVRVASRYFKGPELLVDL 201
Query: 193 KKYSTAVDMWSVGCIMAELLAKK-PLFSGTTEVDQIDKIFKTLGTPTETIW--------- 242
+ Y ++DMWS+GC+ A ++ +K P F G DQ+ KI K LGT ++
Sbjct: 202 QDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELD 261
Query: 243 PGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDD 302
P L L G +++P+ +F A ++S D L++LL YD ++R+T +
Sbjct: 262 PQLEALVG---RHSRKPW----LKFMNAD--NQHLVSPEAIDFLDKLLRYDHQERLTALE 312
Query: 303 ALNHYWFHEV 312
A+ H +F +V
Sbjct: 313 AMTHPYFQQV 322
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 136/250 (54%), Gaps = 27/250 (10%)
Query: 76 PSIVNVKEVVMDDHDSV-YMVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEGVKYL 133
P+IV + ++V D H ++ EY+ + D K L ++ + +++ + +LL+ + Y
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTL----TDYDIRYYIYELLKALDYC 141
Query: 134 HDNWVLHRDLKTSNLLLNNQ-GVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGA 192
H ++HRD+K N++++++ L++ D+G++ Y P K Y V + +++ PELL+
Sbjct: 142 HSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFY-HPGKEYNVRVASRYFKGPELLVDL 200
Query: 193 KKYSTAVDMWSVGCIMAELLAKK-PLFSGTTEVDQIDKIFKTLGTPTETIW--------- 242
+ Y ++DMWS+GC+ A ++ +K P F G DQ+ KI K LGT ++
Sbjct: 201 QDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELD 260
Query: 243 PGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDD 302
P L L G +++P+ +F A ++S D L++LL YD ++R+T +
Sbjct: 261 PQLEALVG---RHSRKPW----LKFMNAD--NQHLVSPEAIDFLDKLLRYDHQERLTALE 311
Query: 303 ALNHYWFHEV 312
A+ H +F +V
Sbjct: 312 AMTHPYFQQV 321
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 136/250 (54%), Gaps = 27/250 (10%)
Query: 76 PSIVNVKEVVMDDHDSV-YMVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEGVKYL 133
P+IV + ++V D H ++ EY+ + D K L ++ + +++ + +LL+ + Y
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTL----TDYDIRYYIYELLKALDYC 141
Query: 134 HDNWVLHRDLKTSNLLLNNQ-GVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGA 192
H ++HRD+K N++++++ L++ D+G++ Y P K Y V + +++ PELL+
Sbjct: 142 HSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFY-HPGKEYNVRVASRYFKGPELLVDL 200
Query: 193 KKYSTAVDMWSVGCIMAELLAKK-PLFSGTTEVDQIDKIFKTLGTPTETIW--------- 242
+ Y ++DMWS+GC+ A ++ +K P F G DQ+ KI K LGT ++
Sbjct: 201 QDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELD 260
Query: 243 PGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDD 302
P L L G +++P+ +F A ++S D L++LL YD ++R+T +
Sbjct: 261 PQLEALVGRH---SRKPW----LKFMNAD--NQHLVSPEAIDFLDKLLRYDHQERLTALE 311
Query: 303 ALNHYWFHEV 312
A+ H +F +V
Sbjct: 312 AMTHPYFQQV 321
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 100/326 (30%), Positives = 158/326 (48%), Gaps = 46/326 (14%)
Query: 19 ISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSI 78
I +G++G V +A D+ E VA+K +K +K + + L +N + I
Sbjct: 62 IGKGSFGQVVKAYDRVEQEWVAIKIIK---NKKAFLNQAQIEVRLLELMNKHDTEMKYYI 118
Query: 79 VNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMK-QPFSTSEVKCLMLQLLEGVKYLH--D 135
V++K M + + +V E + ++L L+ + + S + + Q+ + +L +
Sbjct: 119 VHLKRHFMF-RNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPE 177
Query: 136 NWVLHRDLKTSNLLLNN--QGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGAK 193
++H DLK N+LL N + +KI DFG S Q G + + + +YR+PE+LLG
Sbjct: 178 LSIIHCDLKPENILLCNPKRXAIKIVDFGSSCQLGQRI---YQXIQSRFYRSPEVLLGMP 234
Query: 194 KYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGAKA 253
Y A+DMWS+GCI+ E+ +PLFSG EVDQ++KI + LG P I L + P A+
Sbjct: 235 -YDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHI---LDQAPKARK 290
Query: 254 NFAKQP---YNLLRKRFPAASF---------------TGSP---VLSESGF--------- 283
F K P +NL + + + TG P ESG
Sbjct: 291 FFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFK 350
Query: 284 DLLNRLLTYDPEKRITVDDALNHYWF 309
DL+ R+L YDP+ RI AL H +F
Sbjct: 351 DLILRMLDYDPKTRIQPYYALQHSFF 376
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 136/250 (54%), Gaps = 27/250 (10%)
Query: 76 PSIVNVKEVVMDDHDSV-YMVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEGVKYL 133
P+IV + ++V D H ++ EY+ + D K L ++ + +++ + +LL+ + Y
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTL----TDYDIRYYIYELLKALDYC 141
Query: 134 HDNWVLHRDLKTSNLLLNNQ-GVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGA 192
H ++HRD+K N++++++ L++ D+G++ Y P K Y V + +++ PELL+
Sbjct: 142 HSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFY-HPGKEYNVRVASRYFKGPELLVDL 200
Query: 193 KKYSTAVDMWSVGCIMAELLAKK-PLFSGTTEVDQIDKIFKTLGTPTETIW--------- 242
+ Y ++DMWS+GC+ A ++ +K P F G DQ+ KI K LGT ++
Sbjct: 201 QDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELD 260
Query: 243 PGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDD 302
P L L G +++P+ +F A ++S D L++LL YD ++R+T +
Sbjct: 261 PQLEALVGRH---SRKPW----LKFMNAD--NQHLVSPEAIDFLDKLLRYDHQERLTALE 311
Query: 303 ALNHYWFHEV 312
A+ H +F +V
Sbjct: 312 AMTHPYFQQV 321
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 136/250 (54%), Gaps = 27/250 (10%)
Query: 76 PSIVNVKEVVMDDHDSV-YMVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEGVKYL 133
P+IV + ++V D H ++ EY+ + D K L ++ + +++ + +LL+ + Y
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTL----TDYDIRYYIYELLKALDYC 141
Query: 134 HDNWVLHRDLKTSNLLLNNQ-GVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGA 192
H ++HRD+K N++++++ L++ D+G++ Y P K Y V + +++ PELL+
Sbjct: 142 HSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFY-HPGKEYNVRVASRYFKGPELLVDL 200
Query: 193 KKYSTAVDMWSVGCIMAELLAKK-PLFSGTTEVDQIDKIFKTLGTPTETIW--------- 242
+ Y ++DMWS+GC+ A ++ +K P F G DQ+ KI K LGT ++
Sbjct: 201 QDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELD 260
Query: 243 PGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDD 302
P L L G +++P+ +F A ++S D L++LL YD ++R+T +
Sbjct: 261 PQLEALVGRH---SRKPW----LKFMNAD--NQHLVSPEAIDFLDKLLRYDHQERLTALE 311
Query: 303 ALNHYWFHEV 312
A+ H +F +V
Sbjct: 312 AMTHPYFQQV 321
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 136/250 (54%), Gaps = 27/250 (10%)
Query: 76 PSIVNVKEVVMDDHDSV-YMVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEGVKYL 133
P+IV + ++V D H ++ EY+ + D K L ++ + +++ + +LL+ + Y
Sbjct: 87 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTL----TDYDIRYYIYELLKALDYC 142
Query: 134 HDNWVLHRDLKTSNLLLNNQ-GVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGA 192
H ++HRD+K N++++++ L++ D+G++ Y P K Y V + +++ PELL+
Sbjct: 143 HSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFY-HPGKEYNVRVASRYFKGPELLVDL 201
Query: 193 KKYSTAVDMWSVGCIMAELLAKK-PLFSGTTEVDQIDKIFKTLGTPTETIW--------- 242
+ Y ++DMWS+GC+ A ++ +K P F G DQ+ KI K LGT ++
Sbjct: 202 QDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELD 261
Query: 243 PGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDD 302
P L L G +++P+ +F A ++S D L++LL YD ++R+T +
Sbjct: 262 PQLEALVGRH---SRKPW----LKFMNAD--NQHLVSPEAIDFLDKLLRYDHQERLTALE 312
Query: 303 ALNHYWFHEV 312
A+ H +F +V
Sbjct: 313 AMTHPYFQQV 322
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 136/250 (54%), Gaps = 27/250 (10%)
Query: 76 PSIVNVKEVVMDDHDSV-YMVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEGVKYL 133
P+IV + ++V D H ++ EY+ + D K L ++ + +++ + +LL+ + Y
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTL----TDYDIRYYIYELLKALDYC 141
Query: 134 HDNWVLHRDLKTSNLLLNNQ-GVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGA 192
H ++HRD+K N++++++ L++ D+G++ Y P K Y V + +++ PELL+
Sbjct: 142 HSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFY-HPGKEYNVRVASRYFKGPELLVDL 200
Query: 193 KKYSTAVDMWSVGCIMAELLAKK-PLFSGTTEVDQIDKIFKTLGTPTETIW--------- 242
+ Y ++DMWS+GC+ A ++ +K P F G DQ+ KI K LGT ++
Sbjct: 201 QDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELD 260
Query: 243 PGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDD 302
P L L G +++P+ +F A ++S D L++LL YD ++R+T +
Sbjct: 261 PQLEALVGRH---SRKPW----LKFMNAD--NQHLVSPEAIDFLDKLLRYDHQERLTALE 311
Query: 303 ALNHYWFHEV 312
A+ H +F +V
Sbjct: 312 AMTHPYFQQV 321
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 136/250 (54%), Gaps = 27/250 (10%)
Query: 76 PSIVNVKEVVMDDHDSV-YMVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEGVKYL 133
P+IV + ++V D H ++ EY+ + D K L ++ + +++ + +LL+ + Y
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTL----TDYDIRYYIYELLKALDYC 141
Query: 134 HDNWVLHRDLKTSNLLLNNQ-GVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGA 192
H ++HRD+K N++++++ L++ D+G++ Y P K Y V + +++ PELL+
Sbjct: 142 HSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFY-HPGKEYNVRVASRYFKGPELLVDL 200
Query: 193 KKYSTAVDMWSVGCIMAELLAKK-PLFSGTTEVDQIDKIFKTLGTPTETIW--------- 242
+ Y ++DMWS+GC+ A ++ +K P F G DQ+ KI K LGT ++
Sbjct: 201 QDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELD 260
Query: 243 PGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDD 302
P L L G +++P+ +F A ++S D L++LL YD ++R+T +
Sbjct: 261 PQLEALVGRH---SRKPW----LKFMNAD--NQHLVSPEAIDFLDKLLRYDHQERLTALE 311
Query: 303 ALNHYWFHEV 312
A+ H +F +V
Sbjct: 312 AMTHPYFQQV 321
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 142/309 (45%), Gaps = 45/309 (14%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILL 71
+F+ N + +G++ VYRA +G VA+K + K+ + G E+ I
Sbjct: 12 DFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMID-----KKAMYKAGMVQRVQNEVKIHC 66
Query: 72 SFDHPSIVNVKEVVMDDHDSVYMVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEGV 130
HPSI+ + +D + VY+V+E + ++ +++ +PFS +E + M Q++ G+
Sbjct: 67 QLKHPSILELYNY-FEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGM 125
Query: 131 KYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLL 190
YLH + +LHRDL SNLLL +KI DFG++ Q P + + +L T Y +PE+
Sbjct: 126 LYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIAT 185
Query: 191 GAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPG 250
+ + D+WS+GC+ LL +P F T + ++K+
Sbjct: 186 RS-AHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVV------------------- 225
Query: 251 AKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFH 310
A + LS DL+++LL +P R+++ L+H +
Sbjct: 226 ------------------LADYEMPSFLSIEAKDLIHQLLRRNPADRLSLSSVLDHPFMS 267
Query: 311 EVPLPKSKD 319
KSKD
Sbjct: 268 RNSSTKSKD 276
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/316 (27%), Positives = 165/316 (52%), Gaps = 41/316 (12%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVA---LKKVKMNVGRKEDCLEYGFPISSLREIN 68
+++ + K+ G Y V+ A + + E V LK VK N + REI
Sbjct: 38 DYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKNKIK--------------REIK 83
Query: 69 ILLSF-DHPSIVNVKEVVMDD-HDSVYMVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQ 125
IL + P+I+ + ++V D + +V E++ + D K L +++ + +++ M +
Sbjct: 84 ILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTL----TDYDIRFYMYE 139
Query: 126 LLEGVKYLHDNWVLHRDLKTSNLLLNNQGV-LKICDFGMSRQYGSPLKPYTSLVVTLWYR 184
+L+ + Y H ++HRD+K N++++++ L++ D+G++ Y P + Y V + +++
Sbjct: 140 ILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFY-HPGQEYNVRVASRYFK 198
Query: 185 APELLLGAKKYSTAVDMWSVGCIMAELLAKK-PLFSGTTEVDQIDKIFKTLGTPTETIWP 243
PELL+ + Y ++DMWS+GC++A ++ +K P F G DQ+ +I K LG TE ++
Sbjct: 199 GPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLG--TEDLYD 256
Query: 244 GLSELPGAKANFAKQP-YNLL-----RKRFPAASFT-GSPVLSESGFDLLNRLLTYDPEK 296
+ K N P +N + RKR+ + ++S D L++LL YD +
Sbjct: 257 YID-----KYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQS 311
Query: 297 RITVDDALNHYWFHEV 312
R+T +A+ H +F+ V
Sbjct: 312 RLTAREAMEHPYFYTV 327
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 125/298 (41%), Gaps = 46/298 (15%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILL 71
+FE + +G +G VY AR+K+S I+ALK V K + G RE+ I
Sbjct: 35 DFEIGRPLGKGKFGNVYLAREKQSKFILALK-----VLFKAQLEKAGVEHQLRREVEIQS 89
Query: 72 SFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVK 131
HP+I+ + D VY+++EY + F + +L +
Sbjct: 90 HLRHPNILRLY-GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALS 148
Query: 132 YLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLG 191
Y H V+HRD+K NLLL + G LKI DFG S +P T+L TL Y PE++ G
Sbjct: 149 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVH--APSSRRTTLCGTLDYLPPEMIEG 206
Query: 192 AKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGA 251
+ + VD+WS+G + E L KP F T
Sbjct: 207 -RMHDEKVDLWSLGVLCYEFLVGKPPFEANT----------------------------- 236
Query: 252 KANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWF 309
Y KR FT ++E DL++RLL ++P +R + + L H W
Sbjct: 237 --------YQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 286
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 135/250 (54%), Gaps = 27/250 (10%)
Query: 76 PSIVNVKEVVMDDHDSV-YMVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEGVKYL 133
P+IV + ++V D H ++ EY+ + D K L ++ + +++ + +LL+ + Y
Sbjct: 107 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTL----TDYDIRYYIYELLKALDYC 162
Query: 134 HDNWVLHRDLKTSNLLLNNQ-GVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGA 192
H ++HRD+K N++++++ L++ D+G++ Y P K Y V + +++ PELL+
Sbjct: 163 HSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFY-HPGKEYNVRVASRYFKGPELLVDL 221
Query: 193 KKYSTAVDMWSVGCIMAELLAKK-PLFSGTTEVDQIDKIFKTLGTPTETIW--------- 242
+ Y ++DMWS+GC+ A ++ +K P F G DQ+ KI K LGT +
Sbjct: 222 QDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNAYLNKYRIELD 281
Query: 243 PGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDD 302
P L L G +++P+ +F A ++S D L++LL YD ++R+T +
Sbjct: 282 PQLEALVG---RHSRKPW----LKFMNAD--NQHLVSPEAIDFLDKLLRYDHQERLTALE 332
Query: 303 ALNHYWFHEV 312
A+ H +F +V
Sbjct: 333 AMTHPYFQQV 342
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 125/298 (41%), Gaps = 46/298 (15%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILL 71
+FE + +G +G VY AR+K+S I+ALK V K + G RE+ I
Sbjct: 14 DFEIGRPLGKGKFGNVYLAREKQSKFILALK-----VLFKAQLEKAGVEHQLRREVEIQS 68
Query: 72 SFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVK 131
HP+I+ + D VY+++EY + F + +L +
Sbjct: 69 HLRHPNILRLYGY-FHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALS 127
Query: 132 YLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLG 191
Y H V+HRD+K NLLL + G LKI DFG S +P T+L TL Y PE++ G
Sbjct: 128 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVH--APSSRRTTLCGTLDYLPPEMIEG 185
Query: 192 AKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGA 251
+ + VD+WS+G + E L KP F T
Sbjct: 186 -RMHDEKVDLWSLGVLCYEFLVGKPPFEANT----------------------------- 215
Query: 252 KANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWF 309
Y KR FT ++E DL++RLL ++P +R + + L H W
Sbjct: 216 --------YQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 265
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 125/298 (41%), Gaps = 46/298 (15%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILL 71
+FE + +G +G VY AR+K+S I+ALK V K + G RE+ I
Sbjct: 9 DFEIGRPLGKGKFGNVYLAREKQSKFILALK-----VLFKAQLEKAGVEHQLRREVEIQS 63
Query: 72 SFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVK 131
HP+I+ + D VY+++EY + F + +L +
Sbjct: 64 HLRHPNILRLYGY-FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 132 YLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLG 191
Y H V+HRD+K NLLL + G LKI DFG S +P T+L TL Y PE++ G
Sbjct: 123 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVH--APSSRRTTLCGTLDYLPPEMIEG 180
Query: 192 AKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGA 251
+ + VD+WS+G + E L KP F T
Sbjct: 181 -RMHDEKVDLWSLGVLCYEFLVGKPPFEANT----------------------------- 210
Query: 252 KANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWF 309
Y KR FT ++E DL++RLL ++P +R + + L H W
Sbjct: 211 --------YQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 260
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 94/306 (30%), Positives = 141/306 (46%), Gaps = 56/306 (18%)
Query: 19 ISEGTYGIVYRARDKKSGEIVALK---KVKMNVGRKEDCLEYGFPISSLREINILLSFDH 75
+ G G V A ++K+ + VA+K K K +G E ++ EI IL +H
Sbjct: 18 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAR---EADPALNVETEIEILKKLNH 74
Query: 76 PSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHD 135
P I+ +K D + Y+V+E ME + + + K Q+L V+YLH+
Sbjct: 75 PCIIKIKNFF--DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHE 132
Query: 136 NWVLHRDLKTSNLLLNNQ---GVLKICDFGMSRQYGSPLKPYTSLVVTLW----YRAPEL 188
N ++HRDLK N+LL++Q ++KI DFG S+ G TSL+ TL Y APE+
Sbjct: 133 NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE-----TSLMRTLCGTPTYLAPEV 187
Query: 189 L--LGAKKYSTAVDMWSVGCIMAELLAKKPLFS-GTTEVDQIDKIFKTLGTPTETIWPGL 245
L +G Y+ AVD WS+G I+ L+ P FS T+V D+I
Sbjct: 188 LVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQI--------------- 232
Query: 246 SELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALN 305
K NF + + +SE DL+ +LL DP+ R T ++AL
Sbjct: 233 ---TSGKYNFIPEVW---------------AEVSEKALDLVKKLLVVDPKARFTTEEALR 274
Query: 306 HYWFHE 311
H W +
Sbjct: 275 HPWLQD 280
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 125/297 (42%), Gaps = 46/297 (15%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILL 71
+FE + +G +G VY AR+K+S I+ALK V K + G RE+ I
Sbjct: 8 DFEIGRPLGKGKFGNVYLAREKQSKFILALK-----VLFKAQLEKAGVEHQLRREVEIQS 62
Query: 72 SFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVK 131
HP+I+ + D VY+++EY + F + +L +
Sbjct: 63 HLRHPNILRLYGY-FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALS 121
Query: 132 YLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLG 191
Y H V+HRD+K NLLL + G LKI DFG S +P T+L TL Y PE++ G
Sbjct: 122 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVH--APSSRRTTLCGTLDYLPPEMIEG 179
Query: 192 AKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGA 251
+ + VD+WS+G + E L KP F T
Sbjct: 180 -RMHDEKVDLWSLGVLCYEFLVGKPPFEANT----------------------------- 209
Query: 252 KANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYW 308
Y KR FT ++E DL++RLL ++P +R + + L H W
Sbjct: 210 --------YQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 258
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 94/306 (30%), Positives = 141/306 (46%), Gaps = 56/306 (18%)
Query: 19 ISEGTYGIVYRARDKKSGEIVALK---KVKMNVGRKEDCLEYGFPISSLREINILLSFDH 75
+ G G V A ++K+ + VA+K K K +G E ++ EI IL +H
Sbjct: 17 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAR---EADPALNVETEIEILKKLNH 73
Query: 76 PSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHD 135
P I+ +K D + Y+V+E ME + + + K Q+L V+YLH+
Sbjct: 74 PCIIKIKNFF--DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHE 131
Query: 136 NWVLHRDLKTSNLLLNNQ---GVLKICDFGMSRQYGSPLKPYTSLVVTLW----YRAPEL 188
N ++HRDLK N+LL++Q ++KI DFG S+ G TSL+ TL Y APE+
Sbjct: 132 NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE-----TSLMRTLCGTPTYLAPEV 186
Query: 189 L--LGAKKYSTAVDMWSVGCIMAELLAKKPLFS-GTTEVDQIDKIFKTLGTPTETIWPGL 245
L +G Y+ AVD WS+G I+ L+ P FS T+V D+I
Sbjct: 187 LVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQI--------------- 231
Query: 246 SELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALN 305
K NF + + +SE DL+ +LL DP+ R T ++AL
Sbjct: 232 ---TSGKYNFIPEVW---------------AEVSEKALDLVKKLLVVDPKARFTTEEALR 273
Query: 306 HYWFHE 311
H W +
Sbjct: 274 HPWLQD 279
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 125/298 (41%), Gaps = 46/298 (15%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILL 71
+FE + +G +G VY AR+K+S I+ALK V K + G RE+ I
Sbjct: 12 DFEIGRPLGKGKFGNVYLAREKQSKFILALK-----VLFKAQLEKAGVEHQLRREVEIQS 66
Query: 72 SFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVK 131
HP+I+ + D VY+++EY + F + +L +
Sbjct: 67 HLRHPNILRLYGY-FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALS 125
Query: 132 YLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLG 191
Y H V+HRD+K NLLL + G LKI DFG S +P T+L TL Y PE++ G
Sbjct: 126 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVH--APSSRRTTLCGTLDYLPPEMIEG 183
Query: 192 AKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGA 251
+ + VD+WS+G + E L KP F T
Sbjct: 184 -RMHDEKVDLWSLGVLCYEFLVGKPPFEANT----------------------------- 213
Query: 252 KANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWF 309
Y KR FT ++E DL++RLL ++P +R + + L H W
Sbjct: 214 --------YQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 263
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 94/306 (30%), Positives = 141/306 (46%), Gaps = 56/306 (18%)
Query: 19 ISEGTYGIVYRARDKKSGEIVALK---KVKMNVGRKEDCLEYGFPISSLREINILLSFDH 75
+ G G V A ++K+ + VA+K K K +G E ++ EI IL +H
Sbjct: 24 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAR---EADPALNVETEIEILKKLNH 80
Query: 76 PSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHD 135
P I+ +K D + Y+V+E ME + + + K Q+L V+YLH+
Sbjct: 81 PCIIKIKNFF--DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHE 138
Query: 136 NWVLHRDLKTSNLLLNNQ---GVLKICDFGMSRQYGSPLKPYTSLVVTLW----YRAPEL 188
N ++HRDLK N+LL++Q ++KI DFG S+ G TSL+ TL Y APE+
Sbjct: 139 NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE-----TSLMRTLCGTPTYLAPEV 193
Query: 189 L--LGAKKYSTAVDMWSVGCIMAELLAKKPLFS-GTTEVDQIDKIFKTLGTPTETIWPGL 245
L +G Y+ AVD WS+G I+ L+ P FS T+V D+I
Sbjct: 194 LVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQI--------------- 238
Query: 246 SELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALN 305
K NF + + +SE DL+ +LL DP+ R T ++AL
Sbjct: 239 ---TSGKYNFIPEVW---------------AEVSEKALDLVKKLLVVDPKARFTTEEALR 280
Query: 306 HYWFHE 311
H W +
Sbjct: 281 HPWLQD 286
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 94/306 (30%), Positives = 141/306 (46%), Gaps = 56/306 (18%)
Query: 19 ISEGTYGIVYRARDKKSGEIVALK---KVKMNVGRKEDCLEYGFPISSLREINILLSFDH 75
+ G G V A ++K+ + VA+K K K +G E ++ EI IL +H
Sbjct: 18 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAR---EADPALNVETEIEILKKLNH 74
Query: 76 PSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHD 135
P I+ +K D + Y+V+E ME + + + K Q+L V+YLH+
Sbjct: 75 PCIIKIKNFF--DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHE 132
Query: 136 NWVLHRDLKTSNLLLNNQ---GVLKICDFGMSRQYGSPLKPYTSLVVTLW----YRAPEL 188
N ++HRDLK N+LL++Q ++KI DFG S+ G TSL+ TL Y APE+
Sbjct: 133 NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE-----TSLMRTLCGTPTYLAPEV 187
Query: 189 L--LGAKKYSTAVDMWSVGCIMAELLAKKPLFS-GTTEVDQIDKIFKTLGTPTETIWPGL 245
L +G Y+ AVD WS+G I+ L+ P FS T+V D+I
Sbjct: 188 LVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQI--------------- 232
Query: 246 SELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALN 305
K NF + + +SE DL+ +LL DP+ R T ++AL
Sbjct: 233 ---TSGKYNFIPEVW---------------AEVSEKALDLVKKLLVVDPKARFTTEEALR 274
Query: 306 HYWFHE 311
H W +
Sbjct: 275 HPWLQD 280
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 108 bits (269), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 125/298 (41%), Gaps = 46/298 (15%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILL 71
+FE + +G +G VY AR+K+S I+ALK V K + G RE+ I
Sbjct: 14 DFEIGRPLGKGKFGNVYLAREKQSKFILALK-----VLFKAQLEKAGVEHQLRREVEIQS 68
Query: 72 SFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVK 131
HP+I+ + D VY+++EY + F + +L +
Sbjct: 69 HLRHPNILRLYGY-FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALS 127
Query: 132 YLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLG 191
Y H V+HRD+K NLLL + G LKI DFG S +P T+L TL Y PE++ G
Sbjct: 128 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVH--APSSRRTTLCGTLDYLPPEMIEG 185
Query: 192 AKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGA 251
+ + VD+WS+G + E L KP F T
Sbjct: 186 -RMHDEKVDLWSLGVLCYEFLVGKPPFEANT----------------------------- 215
Query: 252 KANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWF 309
Y KR FT ++E DL++RLL ++P +R + + L H W
Sbjct: 216 --------YQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 265
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 108 bits (269), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 125/298 (41%), Gaps = 46/298 (15%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILL 71
+FE + +G +G VY AR+K+S I+ALK V K + G RE+ I
Sbjct: 13 DFEIGRPLGKGKFGNVYLAREKQSKFILALK-----VLFKAQLEKAGVEHQLRREVEIQS 67
Query: 72 SFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVK 131
HP+I+ + D VY+++EY + F + +L +
Sbjct: 68 HLRHPNILRLYGY-FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALS 126
Query: 132 YLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLG 191
Y H V+HRD+K NLLL + G LKI DFG S +P T+L TL Y PE++ G
Sbjct: 127 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVH--APSSRRTTLCGTLDYLPPEMIEG 184
Query: 192 AKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGA 251
+ + VD+WS+G + E L KP F T
Sbjct: 185 -RMHDEKVDLWSLGVLCYEFLVGKPPFEANT----------------------------- 214
Query: 252 KANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWF 309
Y KR FT ++E DL++RLL ++P +R + + L H W
Sbjct: 215 --------YQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 264
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 108 bits (269), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 124/298 (41%), Gaps = 46/298 (15%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILL 71
+FE + +G +G VY AR+K+S I+ALK V K + G RE+ I
Sbjct: 14 DFEIGRPLGKGKFGNVYLAREKQSKFILALK-----VLFKAQLEKAGVEHQLRREVEIQS 68
Query: 72 SFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVK 131
HP+I+ + D VY+++EY + F + +L +
Sbjct: 69 HLRHPNILRLYGY-FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALS 127
Query: 132 YLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLG 191
Y H V+HRD+K NLLL + G LKI DFG S +P T+L TL Y PE + G
Sbjct: 128 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVH--APSSRRTTLCGTLDYLPPEXIEG 185
Query: 192 AKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGA 251
+ + VD+WS+G + E L KP F T
Sbjct: 186 -RXHDEKVDLWSLGVLCYEFLVGKPPFEANT----------------------------- 215
Query: 252 KANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWF 309
Y KR FT ++E DL++RLL ++P +R + + L H W
Sbjct: 216 --------YQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPXLREVLEHPWI 265
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 108 bits (269), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 125/298 (41%), Gaps = 46/298 (15%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILL 71
+FE + +G +G VY AR+K+S I+ALK V K + G RE+ I
Sbjct: 26 DFEIGRPLGKGKFGNVYLAREKQSKFILALK-----VLFKAQLEKAGVEHQLRREVEIQS 80
Query: 72 SFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVK 131
HP+I+ + D VY+++EY + F + +L +
Sbjct: 81 HLRHPNILRLY-GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALS 139
Query: 132 YLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLG 191
Y H V+HRD+K NLLL + G LKI DFG S +P T+L TL Y PE++ G
Sbjct: 140 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEG 197
Query: 192 AKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGA 251
+ + VD+WS+G + E L KP F T
Sbjct: 198 -RMHDEKVDLWSLGVLCYEFLVGKPPFEANT----------------------------- 227
Query: 252 KANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWF 309
Y KR FT ++E DL++RLL ++P +R + + L H W
Sbjct: 228 --------YQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 277
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 108 bits (269), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 94/306 (30%), Positives = 141/306 (46%), Gaps = 56/306 (18%)
Query: 19 ISEGTYGIVYRARDKKSGEIVALK---KVKMNVGRKEDCLEYGFPISSLREINILLSFDH 75
+ G G V A ++K+ + VA+K K K +G E ++ EI IL +H
Sbjct: 18 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAR---EADPALNVETEIEILKKLNH 74
Query: 76 PSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHD 135
P I+ +K D + Y+V+E ME + + + K Q+L V+YLH+
Sbjct: 75 PCIIKIKNFF--DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHE 132
Query: 136 NWVLHRDLKTSNLLLNNQ---GVLKICDFGMSRQYGSPLKPYTSLVVTLW----YRAPEL 188
N ++HRDLK N+LL++Q ++KI DFG S+ G TSL+ TL Y APE+
Sbjct: 133 NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE-----TSLMRTLCGTPTYLAPEV 187
Query: 189 L--LGAKKYSTAVDMWSVGCIMAELLAKKPLFS-GTTEVDQIDKIFKTLGTPTETIWPGL 245
L +G Y+ AVD WS+G I+ L+ P FS T+V D+I
Sbjct: 188 LVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQI--------------- 232
Query: 246 SELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALN 305
K NF + + +SE DL+ +LL DP+ R T ++AL
Sbjct: 233 ---TSGKYNFIPEVW---------------AEVSEKALDLVKKLLVVDPKARFTTEEALR 274
Query: 306 HYWFHE 311
H W +
Sbjct: 275 HPWLQD 280
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 108 bits (269), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 125/297 (42%), Gaps = 46/297 (15%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILL 71
+FE + +G +G VY AR+K+S I+ALK V K + G RE+ I
Sbjct: 12 DFEIGRPLGKGKFGNVYLAREKQSKFILALK-----VLFKAQLEKAGVEHQLRREVEIQS 66
Query: 72 SFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVK 131
HP+I+ + D VY+++EY + F + +L +
Sbjct: 67 HLRHPNILRLYGY-FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALS 125
Query: 132 YLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLG 191
Y H V+HRD+K NLLL + G LKI DFG S +P T+L TL Y PE++ G
Sbjct: 126 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVH--APSSRRTTLCGTLDYLPPEMIEG 183
Query: 192 AKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGA 251
+ + VD+WS+G + E L KP F T
Sbjct: 184 -RMHDEKVDLWSLGVLCYEFLVGKPPFEANT----------------------------- 213
Query: 252 KANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYW 308
Y KR FT ++E DL++RLL ++P +R + + L H W
Sbjct: 214 --------YQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 262
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 108 bits (269), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 124/298 (41%), Gaps = 46/298 (15%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILL 71
+FE + +G +G VY AR+K+S I+ALK V K + G RE+ I
Sbjct: 9 DFEIGRPLGKGKFGNVYLAREKQSKFILALK-----VLFKAQLEKAGVEHQLRREVEIQS 63
Query: 72 SFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVK 131
HP+I+ + D VY+++EY + F + +L +
Sbjct: 64 HLRHPNILRLYGY-FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 132 YLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLG 191
Y H V+HRD+K NLLL + G LKI DFG S +P T L TL Y PE++ G
Sbjct: 123 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVH--APSSRRTELCGTLDYLPPEMIEG 180
Query: 192 AKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGA 251
+ + VD+WS+G + E L KP F T
Sbjct: 181 -RMHDEKVDLWSLGVLCYEFLVGKPPFEANT----------------------------- 210
Query: 252 KANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWF 309
Y KR FT ++E DL++RLL ++P +R + + L H W
Sbjct: 211 --------YQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 260
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 107 bits (268), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 124/297 (41%), Gaps = 46/297 (15%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILL 71
+FE + +G +G VY AR+K+S I+ALK V K + G RE+ I
Sbjct: 9 DFEIGRPLGKGKFGNVYLAREKQSKFILALK-----VLFKAQLEKAGVEHQLRREVEIQS 63
Query: 72 SFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVK 131
HP+I+ + D VY+++EY + F + +L +
Sbjct: 64 HLRHPNILRLYGY-FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 132 YLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLG 191
Y H V+HRD+K NLLL + G LKI DFG S +P T L TL Y PE++ G
Sbjct: 123 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVH--APSSRRTXLCGTLDYLPPEMIEG 180
Query: 192 AKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGA 251
+ + VD+WS+G + E L KP F T
Sbjct: 181 -RMHDEKVDLWSLGVLCYEFLVGKPPFEANT----------------------------- 210
Query: 252 KANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYW 308
Y KR FT ++E DL++RLL ++P +R + + L H W
Sbjct: 211 --------YQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 107 bits (268), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 132/242 (54%), Gaps = 36/242 (14%)
Query: 94 MVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNN 152
+V EY+ + D K L Q + +++ M +LL+ + Y H ++HRD+K N+++++
Sbjct: 117 LVFEYINNTDFKQLY----QILTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMIDH 172
Query: 153 QGV-LKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAEL 211
Q L++ D+G++ Y P + Y V + +++ PELL+ + Y ++DMWS+GC++A +
Sbjct: 173 QQKKLRLIDWGLAEFY-HPAQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASM 231
Query: 212 LAKK-PLFSGTTEVDQIDKIFKTLGTPTETIW-----------PGLSELPGAKANFAKQP 259
+ ++ P F G DQ+ +I K LGT E ++ P +++ G +
Sbjct: 232 IFRREPFFHGQDNYDQLVRIAKVLGT--EELYGYLKKYHIDLDPHFNDILGQHS------ 283
Query: 260 YNLLRKRFPAASFTGSP---VLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVPLPK 316
RKR+ +F S ++S DLL++LL YD ++R+T +A+ H +F+ V +
Sbjct: 284 ----RKRW--ENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAKEAMEHPYFYPVVKEQ 337
Query: 317 SK 318
S+
Sbjct: 338 SQ 339
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 107 bits (268), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 124/298 (41%), Gaps = 46/298 (15%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILL 71
+FE + +G +G VY AR+K+S I+ALK V K + G RE+ I
Sbjct: 9 DFEIGRPLGKGKFGNVYLAREKQSKFILALK-----VLFKAQLEKAGVEHQLRREVEIQS 63
Query: 72 SFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVK 131
HP+I+ + D VY+++EY + F + +L +
Sbjct: 64 HLRHPNILRLYGY-FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 132 YLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLG 191
Y H V+HRD+K NLLL + G LKI DFG S +P T L TL Y PE++ G
Sbjct: 123 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVH--APSSRRTDLCGTLDYLPPEMIEG 180
Query: 192 AKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGA 251
+ + VD+WS+G + E L KP F T
Sbjct: 181 -RMHDEKVDLWSLGVLCYEFLVGKPPFEANT----------------------------- 210
Query: 252 KANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWF 309
Y KR FT ++E DL++RLL ++P +R + + L H W
Sbjct: 211 --------YQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 260
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 107 bits (268), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 124/298 (41%), Gaps = 46/298 (15%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILL 71
+FE + +G +G VY AR+K+S I+ALK V K + G RE+ I
Sbjct: 14 DFEIGRPLGKGKFGNVYLAREKQSKFILALK-----VLFKAQLEKAGVEHQLRREVEIQS 68
Query: 72 SFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVK 131
HP+I+ + D VY+++EY + F + +L +
Sbjct: 69 HLRHPNILRLYGY-FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALS 127
Query: 132 YLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLG 191
Y H V+HRD+K NLLL + G LKI DFG S +P T L TL Y PE++ G
Sbjct: 128 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVH--APSSRRTDLCGTLDYLPPEMIEG 185
Query: 192 AKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGA 251
+ + VD+WS+G + E L KP F T
Sbjct: 186 -RMHDEKVDLWSLGVLCYEFLVGKPPFEANT----------------------------- 215
Query: 252 KANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWF 309
Y KR FT ++E DL++RLL ++P +R + + L H W
Sbjct: 216 --------YQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 265
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 107 bits (268), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 124/298 (41%), Gaps = 46/298 (15%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILL 71
+FE + +G +G VY AR+K+S I+ALK V K + G RE+ I
Sbjct: 10 DFEIGRPLGKGKFGNVYLAREKQSKFILALK-----VLFKAQLEKAGVEHQLRREVEIQS 64
Query: 72 SFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVK 131
HP+I+ + D VY+++EY + F + +L +
Sbjct: 65 HLRHPNILRLYGY-FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALS 123
Query: 132 YLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLG 191
Y H V+HRD+K NLLL + G LKI DFG S +P T L TL Y PE++ G
Sbjct: 124 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVH--APSSRRTDLCGTLDYLPPEMIEG 181
Query: 192 AKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGA 251
+ + VD+WS+G + E L KP F T
Sbjct: 182 -RMHDEKVDLWSLGVLCYEFLVGKPPFEANT----------------------------- 211
Query: 252 KANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWF 309
Y KR FT ++E DL++RLL ++P +R + + L H W
Sbjct: 212 --------YQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 261
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 107 bits (268), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 125/298 (41%), Gaps = 46/298 (15%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILL 71
+FE + +G +G VY AR+K+S I+ALK V K + G RE+ I
Sbjct: 10 DFEIGRPLGKGKFGNVYLAREKQSKFILALK-----VLFKAQLEKAGVEHQLRREVEIQS 64
Query: 72 SFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVK 131
HP+I+ + D VY+++EY + F + +L +
Sbjct: 65 HLRHPNILRLYGY-FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALS 123
Query: 132 YLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLG 191
Y H V+HRD+K NLLL + G LKI DFG S +P T+L TL Y PE++ G
Sbjct: 124 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWSCH--APSSRRTTLSGTLDYLPPEMIEG 181
Query: 192 AKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGA 251
+ + VD+WS+G + E L KP F T
Sbjct: 182 -RMHDEKVDLWSLGVLCYEFLVGKPPFEANT----------------------------- 211
Query: 252 KANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWF 309
Y KR FT ++E DL++RLL ++P +R + + L H W
Sbjct: 212 --------YQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 261
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 107 bits (268), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 132/242 (54%), Gaps = 36/242 (14%)
Query: 94 MVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNN 152
+V EY+ + D K L Q + +++ M +LL+ + Y H ++HRD+K N+++++
Sbjct: 112 LVFEYINNTDFKQLY----QILTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMIDH 167
Query: 153 QGV-LKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAEL 211
Q L++ D+G++ Y P + Y V + +++ PELL+ + Y ++DMWS+GC++A +
Sbjct: 168 QQKKLRLIDWGLAEFY-HPAQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASM 226
Query: 212 LAKK-PLFSGTTEVDQIDKIFKTLGTPTETIW-----------PGLSELPGAKANFAKQP 259
+ ++ P F G DQ+ +I K LGT E ++ P +++ G +
Sbjct: 227 IFRREPFFHGQDNYDQLVRIAKVLGT--EELYGYLKKYHIDLDPHFNDILGQHS------ 278
Query: 260 YNLLRKRFPAASFTGSP---VLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVPLPK 316
RKR+ +F S ++S DLL++LL YD ++R+T +A+ H +F+ V +
Sbjct: 279 ----RKRW--ENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAKEAMEHPYFYPVVKEQ 332
Query: 317 SK 318
S+
Sbjct: 333 SQ 334
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 107 bits (267), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 124/298 (41%), Gaps = 46/298 (15%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILL 71
+FE + +G +G VY AR+K+S I+ALK V K + G RE+ I
Sbjct: 9 DFEIGRPLGKGKFGNVYLAREKQSKFILALK-----VLFKAQLEKAGVEHQLRREVEIQS 63
Query: 72 SFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVK 131
HP+I+ + D VY+++EY + F + +L +
Sbjct: 64 HLRHPNILRLYGY-FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 132 YLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLG 191
Y H V+HRD+K NLLL + G LKI DFG S +P T L TL Y PE++ G
Sbjct: 123 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVH--APSSRRTDLCGTLDYLPPEMIEG 180
Query: 192 AKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGA 251
+ + VD+WS+G + E L KP F T
Sbjct: 181 -RMHDEKVDLWSLGVLCYEFLVGKPPFEANT----------------------------- 210
Query: 252 KANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWF 309
Y KR FT ++E DL++RLL ++P +R + + L H W
Sbjct: 211 --------YQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 260
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 107 bits (267), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 90/299 (30%), Positives = 128/299 (42%), Gaps = 44/299 (14%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
+E + I G +G+ RDK+S E+VA+K ++ R E E + REI S
Sbjct: 20 YELVKDIGSGNFGVARLMRDKQSNELVAVKYIE----RGEKIDE-----NVKREIINHRS 70
Query: 73 FDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKY 132
HP+IV KEV++ + +VMEY + FS E + QL+ GV Y
Sbjct: 71 LRHPNIVRFKEVILTP-THLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSY 129
Query: 133 LHDNWVLHRDLKTSNLLLNNQGV--LKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLL 190
H V HRDLK N LL+ LKICDFG S+ +P S V T Y APE+LL
Sbjct: 130 CHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQP-KSTVGTPAYIAPEVLL 188
Query: 191 GAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPG 250
+ D+WS G + +L F E P
Sbjct: 189 KKEYDGKVADVWSCGVTLYVMLVGAYPF----------------------------EDPE 220
Query: 251 AKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWF 309
NF K + +L ++ + +S L++R+ DP KRI++ + NH WF
Sbjct: 221 EPKNFRKTIHRILNVQYAIPDYVH---ISPECRHLISRIFVADPAKRISIPEIRNHEWF 276
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 107 bits (267), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 90/301 (29%), Positives = 128/301 (42%), Gaps = 48/301 (15%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISS--LREINIL 70
+E + I G +G+ RDK+S E+VA+K + E G I++ REI
Sbjct: 21 YELVKDIGSGNFGVARLMRDKQSNELVAVKYI-----------ERGEKIAANVKREIINH 69
Query: 71 LSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGV 130
S HP+IV KEV++ + +VMEY + FS E + QL+ GV
Sbjct: 70 RSLRHPNIVRFKEVILTP-THLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGV 128
Query: 131 KYLHDNWVLHRDLKTSNLLLNNQGV--LKICDFGMSRQYGSPLKPYTSLVVTLWYRAPEL 188
Y H V HRDLK N LL+ LKICDFG S+ +P S V T Y APE+
Sbjct: 129 SYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQP-KSTVGTPAYIAPEV 187
Query: 189 LLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSEL 248
LL + D+WS G + +L F E
Sbjct: 188 LLKKEYDGKVADVWSCGVTLYVMLVGAYPF----------------------------ED 219
Query: 249 PGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYW 308
P NF K + +L ++ + +S L++R+ DP KRI++ + NH W
Sbjct: 220 PEEPKNFRKTIHRILNVQYAIPDYVH---ISPECRHLISRIFVADPAKRISIPEIRNHEW 276
Query: 309 F 309
F
Sbjct: 277 F 277
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 93/306 (30%), Positives = 141/306 (46%), Gaps = 56/306 (18%)
Query: 19 ISEGTYGIVYRARDKKSGEIVALK---KVKMNVGRKEDCLEYGFPISSLREINILLSFDH 75
+ G G V A ++K+ + VA++ K K +G E ++ EI IL +H
Sbjct: 157 LGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAR---EADPALNVETEIEILKKLNH 213
Query: 76 PSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHD 135
P I+ +K D + Y+V+E ME + + + K Q+L V+YLH+
Sbjct: 214 PCIIKIKNFF--DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHE 271
Query: 136 NWVLHRDLKTSNLLLNNQ---GVLKICDFGMSRQYGSPLKPYTSLVVTLW----YRAPEL 188
N ++HRDLK N+LL++Q ++KI DFG S+ G TSL+ TL Y APE+
Sbjct: 272 NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE-----TSLMRTLCGTPTYLAPEV 326
Query: 189 L--LGAKKYSTAVDMWSVGCIMAELLAKKPLFS-GTTEVDQIDKIFKTLGTPTETIWPGL 245
L +G Y+ AVD WS+G I+ L+ P FS T+V D+I
Sbjct: 327 LVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQI--------------- 371
Query: 246 SELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALN 305
K NF + + +SE DL+ +LL DP+ R T ++AL
Sbjct: 372 ---TSGKYNFIPEVW---------------AEVSEKALDLVKKLLVVDPKARFTTEEALR 413
Query: 306 HYWFHE 311
H W +
Sbjct: 414 HPWLQD 419
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 93/306 (30%), Positives = 141/306 (46%), Gaps = 56/306 (18%)
Query: 19 ISEGTYGIVYRARDKKSGEIVALK---KVKMNVGRKEDCLEYGFPISSLREINILLSFDH 75
+ G G V A ++K+ + VA++ K K +G E ++ EI IL +H
Sbjct: 143 LGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAR---EADPALNVETEIEILKKLNH 199
Query: 76 PSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHD 135
P I+ +K D + Y+V+E ME + + + K Q+L V+YLH+
Sbjct: 200 PCIIKIKNFF--DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHE 257
Query: 136 NWVLHRDLKTSNLLLNNQ---GVLKICDFGMSRQYGSPLKPYTSLVVTLW----YRAPEL 188
N ++HRDLK N+LL++Q ++KI DFG S+ G TSL+ TL Y APE+
Sbjct: 258 NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE-----TSLMRTLCGTPTYLAPEV 312
Query: 189 L--LGAKKYSTAVDMWSVGCIMAELLAKKPLFS-GTTEVDQIDKIFKTLGTPTETIWPGL 245
L +G Y+ AVD WS+G I+ L+ P FS T+V D+I
Sbjct: 313 LVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQI--------------- 357
Query: 246 SELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALN 305
K NF + + +SE DL+ +LL DP+ R T ++AL
Sbjct: 358 ---TSGKYNFIPEVW---------------AEVSEKALDLVKKLLVVDPKARFTTEEALR 399
Query: 306 HYWFHE 311
H W +
Sbjct: 400 HPWLQD 405
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 124/298 (41%), Gaps = 46/298 (15%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILL 71
+FE + +G +G VY AR+K+S I+ALK V K + G RE+ I
Sbjct: 12 DFEIGRPLGKGKFGNVYLAREKQSKFILALK-----VLFKAQLEKAGVEHQLRREVEIQS 66
Query: 72 SFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVK 131
HP+I+ + D VY+++EY + F + +L +
Sbjct: 67 HLRHPNILRLYGY-FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALS 125
Query: 132 YLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLG 191
Y H V+HRD+K NLLL + G LKI DFG S +P +L TL Y PE++ G
Sbjct: 126 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVH--APSSRRAALCGTLDYLPPEMIEG 183
Query: 192 AKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGA 251
+ + VD+WS+G + E L KP F T
Sbjct: 184 -RMHDEKVDLWSLGVLCYEFLVGKPPFEANT----------------------------- 213
Query: 252 KANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWF 309
Y KR FT ++E DL++RLL ++P +R + + L H W
Sbjct: 214 --------YQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 263
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 125/298 (41%), Gaps = 46/298 (15%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILL 71
+FE + +G +G VY AR+K+S I+ALK V K + G RE+ I
Sbjct: 12 DFEIGRPLGKGKFGNVYLAREKQSKFILALK-----VLFKAQLEKAGVEHQLRREVEIQS 66
Query: 72 SFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVK 131
HP+I+ + D VY+++EY + F + +L +
Sbjct: 67 HLRHPNILRLYGY-FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALS 125
Query: 132 YLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLG 191
Y H V+HRD+K NLLL + G LKI +FG S +P T+L TL Y PE++ G
Sbjct: 126 YCHSKRVIHRDIKPENLLLGSAGELKIANFGWSVH--APSSRRTTLCGTLDYLPPEMIEG 183
Query: 192 AKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGA 251
+ + VD+WS+G + E L KP F T
Sbjct: 184 -RMHDEKVDLWSLGVLCYEFLVGKPPFEANT----------------------------- 213
Query: 252 KANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWF 309
Y KR FT ++E DL++RLL ++P +R + + L H W
Sbjct: 214 --------YQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 263
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 124/297 (41%), Gaps = 46/297 (15%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILL 71
+FE + +G +G VY AR+K+S I+ALK V K + G RE+ I
Sbjct: 9 DFEIGRPLGKGKFGNVYLAREKQSKFILALK-----VLFKAQLEKAGVEHQLRREVEIQS 63
Query: 72 SFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVK 131
HP+I+ + D VY+++EY + F + +L +
Sbjct: 64 HLRHPNILRLYGY-FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 132 YLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLG 191
Y H V+HRD+K NLLL + G LKI DFG S +P +L TL Y PE++ G
Sbjct: 123 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVH--APSSRRAALCGTLDYLPPEMIEG 180
Query: 192 AKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGA 251
+ + VD+WS+G + E L KP F T
Sbjct: 181 -RMHDEKVDLWSLGVLCYEFLVGKPPFEANT----------------------------- 210
Query: 252 KANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYW 308
Y KR FT ++E DL++RLL ++P +R + + L H W
Sbjct: 211 --------YQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 125/298 (41%), Gaps = 46/298 (15%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILL 71
+FE + +G +G VY AR+K+S I+ALK V K + G RE+ I
Sbjct: 11 DFEIGRPLGKGKFGNVYLAREKQSKFILALK-----VLFKAQLEKAGVEHQLRREVEIQS 65
Query: 72 SFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVK 131
HP+I+ + D VY+++EY + F + +L +
Sbjct: 66 HLRHPNILRLYGY-FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALS 124
Query: 132 YLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLG 191
Y H V+HRD+K NLLL + G LKI +FG S +P T+L TL Y PE++ G
Sbjct: 125 YCHSKRVIHRDIKPENLLLGSAGELKIANFGWSVH--APSSRRTTLCGTLDYLPPEMIEG 182
Query: 192 AKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGA 251
+ + VD+WS+G + E L KP F T
Sbjct: 183 -RMHDEKVDLWSLGVLCYEFLVGKPPFEANT----------------------------- 212
Query: 252 KANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWF 309
Y KR FT ++E DL++RLL ++P +R + + L H W
Sbjct: 213 --------YQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 262
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 124/297 (41%), Gaps = 46/297 (15%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILL 71
+FE + +G +G VY AR+K+ I+ALK V K + G RE+ I
Sbjct: 6 DFEIGRPLGKGKFGNVYLAREKQRKFILALK-----VLFKAQLEKAGVEHQLRREVEIQS 60
Query: 72 SFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVK 131
HP+I+ + D VY+++EY + F + +L +
Sbjct: 61 HLRHPNILRLYGY-FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALS 119
Query: 132 YLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLG 191
Y H V+HRD+K NLLL + G LKI DFG S +P T+L TL Y PE++ G
Sbjct: 120 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVH--APSSRRTTLCGTLDYLPPEMIEG 177
Query: 192 AKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGA 251
+ + VD+WS+G + E L KP F T
Sbjct: 178 -RMHDEKVDLWSLGVLCYEFLVGKPPFEANT----------------------------- 207
Query: 252 KANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYW 308
Y KR FT ++E DL++RLL ++P +R + + L H W
Sbjct: 208 --------YQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 256
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 105 bits (263), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 124/298 (41%), Gaps = 46/298 (15%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILL 71
+FE + +G +G VY AR+K+S I+ALK V K + G RE+ I
Sbjct: 10 DFEIGRPLGKGKFGNVYLAREKQSKFILALK-----VLFKAQLEKAGVEHQLRREVEIQS 64
Query: 72 SFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVK 131
HP+I+ + D VY+++EY + F + +L +
Sbjct: 65 HLRHPNILRLYGY-FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALS 123
Query: 132 YLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLG 191
Y H V+HRD+K NLLL + G LKI DFG S +P +L TL Y PE++ G
Sbjct: 124 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVH--APSSRRDTLCGTLDYLPPEMIEG 181
Query: 192 AKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGA 251
+ + VD+WS+G + E L KP F T
Sbjct: 182 -RMHDEKVDLWSLGVLCYEFLVGKPPFEANT----------------------------- 211
Query: 252 KANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWF 309
Y KR FT ++E DL++RLL ++P +R + + L H W
Sbjct: 212 --------YQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 261
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 105 bits (263), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 123/298 (41%), Gaps = 46/298 (15%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILL 71
+FE + +G +G VY AR+K+S I+ALK V K + G RE+ I
Sbjct: 35 DFEIGRPLGKGKFGNVYLAREKQSKFILALK-----VLFKAQLEKAGVEHQLRREVEIQS 89
Query: 72 SFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVK 131
HP+I+ + D VY+++EY + F + +L +
Sbjct: 90 HLRHPNILRLY-GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALS 148
Query: 132 YLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLG 191
Y H V+HRD+K NLLL + G LKI DFG S +P L TL Y PE++ G
Sbjct: 149 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRDDLCGTLDYLPPEMIEG 206
Query: 192 AKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGA 251
+ + VD+WS+G + E L KP F T
Sbjct: 207 -RMHDEKVDLWSLGVLCYEFLVGKPPFEANT----------------------------- 236
Query: 252 KANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWF 309
Y KR FT ++E DL++RLL ++P +R + + L H W
Sbjct: 237 --------YQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 286
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 123/298 (41%), Gaps = 46/298 (15%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILL 71
+FE + +G +G VY AR+K+S I+ALK V K + G RE+ I
Sbjct: 14 DFEIGRPLGKGKFGNVYLAREKQSKFILALK-----VLFKAQLEKAGVEHQLRREVEIQS 68
Query: 72 SFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVK 131
HP+I+ + D VY+++EY + F + +L +
Sbjct: 69 HLRHPNILRLYGY-FHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALS 127
Query: 132 YLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLG 191
Y H V+HRD+K NLLL + G LKI DFG S +P L TL Y PE++ G
Sbjct: 128 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVH--APSSRRXXLXGTLDYLPPEMIEG 185
Query: 192 AKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGA 251
+ + VD+WS+G + E L KP F T
Sbjct: 186 -RMHDEKVDLWSLGVLCYEFLVGKPPFEANT----------------------------- 215
Query: 252 KANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWF 309
Y KR FT ++E DL++RLL ++P +R + + L H W
Sbjct: 216 --------YQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 265
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 133/246 (54%), Gaps = 19/246 (7%)
Query: 76 PSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHD 135
P+I+ + ++V D ++ EH + ++Q + +++ M ++L+ + Y H
Sbjct: 92 PNIITLADIVKDPVSRTPALV--FEHVNNTDFKQLRQTLTDYDIRFYMYEILKALDYCHS 149
Query: 136 NWVLHRDLKTSNLLLNNQGV-LKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGAKK 194
++HRD+K N++++++ L++ D+G++ Y P + Y V + +++ PELL+ +
Sbjct: 150 MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFY-HPGQEYNVRVASRYFKGPELLVDYQM 208
Query: 195 YSTAVDMWSVGCIMAELLAKK-PLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGAKA 253
Y ++DMWS+GC++A ++ +K P F G DQ+ +I K LG TE ++ + K
Sbjct: 209 YDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLG--TEDLYDYID-----KY 261
Query: 254 NFAKQP-YNLL-----RKRFPAASFT-GSPVLSESGFDLLNRLLTYDPEKRITVDDALNH 306
N P +N + RKR+ + ++S D L++LL YD + R+T +A+ H
Sbjct: 262 NIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH 321
Query: 307 YWFHEV 312
+F+ V
Sbjct: 322 PYFYTV 327
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 123/298 (41%), Gaps = 46/298 (15%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILL 71
+FE + +G +G VY AR+K+S I+ALK V K + G RE+ I
Sbjct: 12 DFEIGRPLGKGKFGNVYLAREKQSKFILALK-----VLFKAQLEKAGVEHQLRREVEIQS 66
Query: 72 SFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVK 131
HP+I+ + D VY+++EY + F + +L +
Sbjct: 67 HLRHPNILRLYGY-FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALS 125
Query: 132 YLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLG 191
Y H V+HRD+K NLLL + G LKI DFG S +P L TL Y PE++ G
Sbjct: 126 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVH--APSSRRDDLCGTLDYLPPEMIEG 183
Query: 192 AKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGA 251
+ + VD+WS+G + E L KP F T
Sbjct: 184 -RMHDEKVDLWSLGVLCYEFLVGKPPFEANT----------------------------- 213
Query: 252 KANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWF 309
Y KR FT ++E DL++RLL ++P +R + + L H W
Sbjct: 214 --------YQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 263
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 123/297 (41%), Gaps = 46/297 (15%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILL 71
+FE + +G +G VY AR+K+S I+ALK V K + G RE+ I
Sbjct: 9 DFEIGRPLGKGKFGNVYLAREKQSKFILALK-----VLFKAQLEKAGVEHQLRREVEIQS 63
Query: 72 SFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVK 131
HP+I+ + D VY+++EY + F + +L +
Sbjct: 64 HLRHPNILRLYGY-FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 132 YLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLG 191
Y H V+HRD+K NLLL + G LKI DFG S +P L TL Y PE++ G
Sbjct: 123 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVH--APSSRRXXLCGTLDYLPPEMIEG 180
Query: 192 AKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGA 251
+ + VD+WS+G + E L KP F T
Sbjct: 181 -RMHDEKVDLWSLGVLCYEFLVGKPPFEANT----------------------------- 210
Query: 252 KANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYW 308
Y KR FT ++E DL++RLL ++P +R + + L H W
Sbjct: 211 --------YQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 105 bits (262), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 123/297 (41%), Gaps = 46/297 (15%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILL 71
+FE + +G +G VY AR+K S I+ALK V K + G RE+ I
Sbjct: 9 DFEIGRPLGKGKFGNVYLAREKNSKFILALK-----VLFKAQLEKAGVEHQLRREVEIQS 63
Query: 72 SFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVK 131
HP+I+ + D VY+++EY + F + +L +
Sbjct: 64 HLRHPNILRLYGYFHDS-TRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 132 YLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLG 191
Y H V+HRD+K NLLL + G LKI DFG S +P +L TL Y PE++ G
Sbjct: 123 YCHSKKVIHRDIKPENLLLGSAGELKIADFGWSVH--APSSRRAALCGTLDYLPPEMIEG 180
Query: 192 AKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGA 251
+ + VD+WS+G + E L KP F T D
Sbjct: 181 -RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQDTY------------------------ 215
Query: 252 KANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYW 308
KR FT ++E DL++RLL ++P +R + + L H W
Sbjct: 216 -------------KRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 105 bits (262), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 123/298 (41%), Gaps = 46/298 (15%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILL 71
+FE + +G +G VY AR+K+S I+ALK V K + G RE+ I
Sbjct: 11 DFEIGRPLGKGKFGNVYLAREKQSKFILALK-----VLFKAQLEKAGVEHQLRREVEIQS 65
Query: 72 SFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVK 131
HP+I+ + D VY+++EY + F + +L +
Sbjct: 66 HLRHPNILRLYGY-FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALS 124
Query: 132 YLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLG 191
Y H V+HRD+K NLLL + G LKI DFG S +P L TL Y PE++ G
Sbjct: 125 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVH--APSSRRXXLCGTLDYLPPEMIEG 182
Query: 192 AKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGA 251
+ + VD+WS+G + E L KP F T
Sbjct: 183 -RMHDEKVDLWSLGVLCYEFLVGKPPFEANT----------------------------- 212
Query: 252 KANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWF 309
Y KR FT ++E DL++RLL ++P +R + + L H W
Sbjct: 213 --------YQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 262
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 123/297 (41%), Gaps = 46/297 (15%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILL 71
+FE + +G +G VY AR+K+S I+ALK V K + G RE+ I
Sbjct: 12 DFEIGRPLGKGKFGNVYLAREKQSKFILALK-----VLFKAQLEKAGVEHQLRREVEIQS 66
Query: 72 SFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVK 131
HP+I+ + D VY+++EY + F + +L +
Sbjct: 67 HLRHPNILRLYGY-FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALS 125
Query: 132 YLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLG 191
Y H V+HRD+K NLLL + G LKI DFG S +P L TL Y PE++ G
Sbjct: 126 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVH--APSSRRXXLCGTLDYLPPEMIEG 183
Query: 192 AKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGA 251
+ + VD+WS+G + E L KP F T
Sbjct: 184 -RMHDEKVDLWSLGVLCYEFLVGKPPFEANT----------------------------- 213
Query: 252 KANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYW 308
Y KR FT ++E DL++RLL ++P +R + + L H W
Sbjct: 214 --------YQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 262
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 105 bits (261), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 138/248 (55%), Gaps = 23/248 (9%)
Query: 76 PSIVNVKEVVMDD-HDSVYMVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEGVKYL 133
P+I+ + ++V D + +V E++ + D K L +++ + +++ M ++L+ + Y
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTL----TDYDIRFYMYEILKALDYC 147
Query: 134 HDNWVLHRDLKTSNLLLNNQGV-LKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGA 192
H ++HRD+K N+L++++ L++ D+G++ Y P + Y V + +++ PELL+
Sbjct: 148 HSMGIMHRDVKPHNVLIDHEHRKLRLIDWGLAEFY-HPGQEYNVRVASRYFKGPELLVDY 206
Query: 193 KKYSTAVDMWSVGCIMAELLAKK-PLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGA 251
+ Y ++DMWS+GC++A ++ +K P F G DQ+ +I K LG TE ++ +
Sbjct: 207 QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLG--TEDLYDYID----- 259
Query: 252 KANFAKQP-YNLL-----RKRFPAASFT-GSPVLSESGFDLLNRLLTYDPEKRITVDDAL 304
K N P +N + RKR+ + ++S D L++LL YD + R+T +A+
Sbjct: 260 KYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAM 319
Query: 305 NHYWFHEV 312
H +F+ V
Sbjct: 320 EHPYFYTV 327
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 104 bits (259), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 127/299 (42%), Gaps = 44/299 (14%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
+E + I G +G+ RDK+S E+VA+K ++ R E E + REI S
Sbjct: 21 YELVKDIGSGNFGVARLMRDKQSNELVAVKYIE----RGEKIDE-----NVKREIINHRS 71
Query: 73 FDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKY 132
HP+IV KEV++ + +VMEY + FS E + QL+ GV Y
Sbjct: 72 LRHPNIVRFKEVILTP-THLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSY 130
Query: 133 LHDNWVLHRDLKTSNLLLNNQGV--LKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLL 190
H V HRDLK N LL+ LKIC FG S+ +P S V T Y APE+LL
Sbjct: 131 CHAMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQP-KSTVGTPAYIAPEVLL 189
Query: 191 GAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPG 250
+ D+WS G + +L F E P
Sbjct: 190 KKEYDGKVADVWSCGVTLYVMLVGAYPF----------------------------EDPE 221
Query: 251 AKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWF 309
NF K + +L ++ + +S L++R+ DP KRI++ + NH WF
Sbjct: 222 EPKNFRKTIHRILNVQYAIPDYVH---ISPECRHLISRIFVADPAKRISIPEIRNHEWF 277
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 104 bits (259), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 141/254 (55%), Gaps = 23/254 (9%)
Query: 76 PSIVNVKEVVMDD-HDSVYMVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEGVKYL 133
P+I+ + ++V D + +V E++ + D K L +++ + +++ M ++L+ + Y
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTL----TDYDIRFYMYEILKALDYC 147
Query: 134 HDNWVLHRDLKTSNLLLNNQGV-LKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGA 192
H ++HRD+K N++++++ L++ D+G++ Y P + Y V + +++ PELL+
Sbjct: 148 HSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFY-HPGQEYNVRVASRYFKGPELLVDY 206
Query: 193 KKYSTAVDMWSVGCIMAELLAKK-PLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGA 251
+ Y ++DMWS+GC++A ++ +K P F G DQ+ +I K LG TE ++ +
Sbjct: 207 QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLG--TEDLYDYID----- 259
Query: 252 KANFAKQP-YNLL-----RKRFPAASFT-GSPVLSESGFDLLNRLLTYDPEKRITVDDAL 304
K N P +N + RKR+ + ++S D L++LL YD + R+T +A+
Sbjct: 260 KYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAM 319
Query: 305 NHYWFHEVPLPKSK 318
H +F+ V +S+
Sbjct: 320 EHPYFYPVVKEQSQ 333
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 104 bits (259), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 138/248 (55%), Gaps = 23/248 (9%)
Query: 76 PSIVNVKEVVMDD-HDSVYMVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEGVKYL 133
P+I+ + ++V D + +V E++ + D K L +++ + +++ M ++L+ + Y
Sbjct: 91 PNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTL----TDYDIRFYMYEILKALDYC 146
Query: 134 HDNWVLHRDLKTSNLLLNNQGV-LKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGA 192
H ++HRD+K N++++++ L++ D+G++ Y P + Y V + +++ PELL+
Sbjct: 147 HSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFY-HPGQEYNVRVASRYFKGPELLVDY 205
Query: 193 KKYSTAVDMWSVGCIMAELLAKK-PLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGA 251
+ Y ++DMWS+GC++A ++ +K P F G DQ+ +I K LG TE ++ +
Sbjct: 206 QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLG--TEDLYDYID----- 258
Query: 252 KANFAKQP-YNLL-----RKRFPAASFT-GSPVLSESGFDLLNRLLTYDPEKRITVDDAL 304
K N P +N + RKR+ + ++S D L++LL YD + R+T +A+
Sbjct: 259 KYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAM 318
Query: 305 NHYWFHEV 312
H +F+ V
Sbjct: 319 EHPYFYTV 326
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 104 bits (259), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 138/248 (55%), Gaps = 23/248 (9%)
Query: 76 PSIVNVKEVVMDD-HDSVYMVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEGVKYL 133
P+I+ + ++V D + +V E++ + D K L +++ + +++ M ++L+ + Y
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTL----TDYDIRFYMYEILKALDYC 147
Query: 134 HDNWVLHRDLKTSNLLLNNQGV-LKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGA 192
H ++HRD+K N++++++ L++ D+G++ Y P + Y V + +++ PELL+
Sbjct: 148 HSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFY-HPGQEYNVRVASRYFKGPELLVDY 206
Query: 193 KKYSTAVDMWSVGCIMAELLAKK-PLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGA 251
+ Y ++DMWS+GC++A ++ +K P F G DQ+ +I K LG TE ++ +
Sbjct: 207 QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLG--TEDLYDYID----- 259
Query: 252 KANFAKQP-YNLL-----RKRFPAASFT-GSPVLSESGFDLLNRLLTYDPEKRITVDDAL 304
K N P +N + RKR+ + ++S D L++LL YD + R+T +A+
Sbjct: 260 KYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAM 319
Query: 305 NHYWFHEV 312
H +F+ V
Sbjct: 320 EHPYFYTV 327
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 104 bits (259), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 138/248 (55%), Gaps = 23/248 (9%)
Query: 76 PSIVNVKEVVMDD-HDSVYMVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEGVKYL 133
P+I+ + ++V D + +V E++ + D K L +++ + +++ M ++L+ + Y
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTL----TDYDIRFYMYEILKALDYC 147
Query: 134 HDNWVLHRDLKTSNLLLNNQGV-LKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGA 192
H ++HRD+K N++++++ L++ D+G++ Y P + Y V + +++ PELL+
Sbjct: 148 HSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFY-HPGQEYNVRVASRYFKGPELLVDY 206
Query: 193 KKYSTAVDMWSVGCIMAELLAKK-PLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGA 251
+ Y ++DMWS+GC++A ++ +K P F G DQ+ +I K LG TE ++ +
Sbjct: 207 QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLG--TEDLYDYID----- 259
Query: 252 KANFAKQP-YNLL-----RKRFPAASFT-GSPVLSESGFDLLNRLLTYDPEKRITVDDAL 304
K N P +N + RKR+ + ++S D L++LL YD + R+T +A+
Sbjct: 260 KYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAM 319
Query: 305 NHYWFHEV 312
H +F+ V
Sbjct: 320 EHPYFYTV 327
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 104 bits (259), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 138/248 (55%), Gaps = 23/248 (9%)
Query: 76 PSIVNVKEVVMDD-HDSVYMVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEGVKYL 133
P+I+ + ++V D + +V E++ + D K L +++ + +++ M ++L+ + Y
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTL----TDYDIRFYMYEILKALDYC 147
Query: 134 HDNWVLHRDLKTSNLLLNNQGV-LKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGA 192
H ++HRD+K N++++++ L++ D+G++ Y P + Y V + +++ PELL+
Sbjct: 148 HSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFY-HPGQEYNVRVASRYFKGPELLVDY 206
Query: 193 KKYSTAVDMWSVGCIMAELLAKK-PLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGA 251
+ Y ++DMWS+GC++A ++ +K P F G DQ+ +I K LG TE ++ +
Sbjct: 207 QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLG--TEDLYDYID----- 259
Query: 252 KANFAKQP-YNLL-----RKRFPAASFT-GSPVLSESGFDLLNRLLTYDPEKRITVDDAL 304
K N P +N + RKR+ + ++S D L++LL YD + R+T +A+
Sbjct: 260 KYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAM 319
Query: 305 NHYWFHEV 312
H +F+ V
Sbjct: 320 EHPYFYTV 327
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 104 bits (259), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 138/248 (55%), Gaps = 23/248 (9%)
Query: 76 PSIVNVKEVVMDD-HDSVYMVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEGVKYL 133
P+I+ + ++V D + +V E++ + D K L +++ + +++ M ++L+ + Y
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTL----TDYDIRFYMYEILKALDYC 147
Query: 134 HDNWVLHRDLKTSNLLLNNQGV-LKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGA 192
H ++HRD+K N++++++ L++ D+G++ Y P + Y V + +++ PELL+
Sbjct: 148 HSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFY-HPGQEYNVRVASRYFKGPELLVDY 206
Query: 193 KKYSTAVDMWSVGCIMAELLAKK-PLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGA 251
+ Y ++DMWS+GC++A ++ +K P F G DQ+ +I K LG TE ++ +
Sbjct: 207 QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLG--TEDLYDYID----- 259
Query: 252 KANFAKQP-YNLL-----RKRFPAASFT-GSPVLSESGFDLLNRLLTYDPEKRITVDDAL 304
K N P +N + RKR+ + ++S D L++LL YD + R+T +A+
Sbjct: 260 KYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAM 319
Query: 305 NHYWFHEV 312
H +F+ V
Sbjct: 320 EHPYFYTV 327
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 104 bits (259), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 138/248 (55%), Gaps = 23/248 (9%)
Query: 76 PSIVNVKEVVMDD-HDSVYMVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEGVKYL 133
P+I+ + ++V D + +V E++ + D K L +++ + +++ M ++L+ + Y
Sbjct: 91 PNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTL----TDYDIRFYMYEILKALDYC 146
Query: 134 HDNWVLHRDLKTSNLLLNNQGV-LKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGA 192
H ++HRD+K N++++++ L++ D+G++ Y P + Y V + +++ PELL+
Sbjct: 147 HSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFY-HPGQEYNVRVASRYFKGPELLVDY 205
Query: 193 KKYSTAVDMWSVGCIMAELLAKK-PLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGA 251
+ Y ++DMWS+GC++A ++ +K P F G DQ+ +I K LG TE ++ +
Sbjct: 206 QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLG--TEDLYDYID----- 258
Query: 252 KANFAKQP-YNLL-----RKRFPAASFT-GSPVLSESGFDLLNRLLTYDPEKRITVDDAL 304
K N P +N + RKR+ + ++S D L++LL YD + R+T +A+
Sbjct: 259 KYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAM 318
Query: 305 NHYWFHEV 312
H +F+ V
Sbjct: 319 EHPYFYTV 326
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 104 bits (259), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 138/248 (55%), Gaps = 23/248 (9%)
Query: 76 PSIVNVKEVVMDD-HDSVYMVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEGVKYL 133
P+I+ + ++V D + +V E++ + D K L +++ + +++ M ++L+ + Y
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTL----TDYDIRFYMYEILKALDYC 147
Query: 134 HDNWVLHRDLKTSNLLLNNQGV-LKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGA 192
H ++HRD+K N++++++ L++ D+G++ Y P + Y V + +++ PELL+
Sbjct: 148 HSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFY-HPGQEYNVRVASRYFKGPELLVDY 206
Query: 193 KKYSTAVDMWSVGCIMAELLAKK-PLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGA 251
+ Y ++DMWS+GC++A ++ +K P F G DQ+ +I K LG TE ++ +
Sbjct: 207 QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLG--TEDLYDYID----- 259
Query: 252 KANFAKQP-YNLL-----RKRFPAASFT-GSPVLSESGFDLLNRLLTYDPEKRITVDDAL 304
K N P +N + RKR+ + ++S D L++LL YD + R+T +A+
Sbjct: 260 KYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAM 319
Query: 305 NHYWFHEV 312
H +F+ V
Sbjct: 320 EHPYFYTV 327
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 104 bits (259), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 138/248 (55%), Gaps = 23/248 (9%)
Query: 76 PSIVNVKEVVMDD-HDSVYMVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEGVKYL 133
P+I+ + ++V D + +V E++ + D K L +++ + +++ M ++L+ + Y
Sbjct: 97 PNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTL----TDYDIRFYMYEILKALDYC 152
Query: 134 HDNWVLHRDLKTSNLLLNNQGV-LKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGA 192
H ++HRD+K N++++++ L++ D+G++ Y P + Y V + +++ PELL+
Sbjct: 153 HSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFY-HPGQEYNVRVASRYFKGPELLVDY 211
Query: 193 KKYSTAVDMWSVGCIMAELLAKK-PLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGA 251
+ Y ++DMWS+GC++A ++ +K P F G DQ+ +I K LG TE ++ +
Sbjct: 212 QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLG--TEDLYDYID----- 264
Query: 252 KANFAKQP-YNLL-----RKRFPAASFT-GSPVLSESGFDLLNRLLTYDPEKRITVDDAL 304
K N P +N + RKR+ + ++S D L++LL YD + R+T +A+
Sbjct: 265 KYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAM 324
Query: 305 NHYWFHEV 312
H +F+ V
Sbjct: 325 EHPYFYTV 332
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 103 bits (258), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 138/248 (55%), Gaps = 23/248 (9%)
Query: 76 PSIVNVKEVVMDD-HDSVYMVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEGVKYL 133
P+I+ + ++V D + +V E++ + D K L +++ + +++ M ++L+ + Y
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTL----TDYDIRFYMYEILKALDYC 147
Query: 134 HDNWVLHRDLKTSNLLLNNQGV-LKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGA 192
H ++HRD+K N++++++ L++ D+G++ Y P + Y V + +++ PELL+
Sbjct: 148 HSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFY-HPGQEYNVRVASRYFKGPELLVDY 206
Query: 193 KKYSTAVDMWSVGCIMAELLAKK-PLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGA 251
+ Y ++DMWS+GC++A ++ +K P F G DQ+ +I K LG TE ++ +
Sbjct: 207 QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLG--TEDLYDYID----- 259
Query: 252 KANFAKQP-YNLL-----RKRFPAASFT-GSPVLSESGFDLLNRLLTYDPEKRITVDDAL 304
K N P +N + RKR+ + ++S D L++LL YD + R+T +A+
Sbjct: 260 KYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAM 319
Query: 305 NHYWFHEV 312
H +F+ V
Sbjct: 320 EHPYFYTV 327
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 103 bits (258), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 138/248 (55%), Gaps = 23/248 (9%)
Query: 76 PSIVNVKEVVMDD-HDSVYMVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEGVKYL 133
P+I+ + ++V D + +V E++ + D K L +++ + +++ M ++L+ + Y
Sbjct: 90 PNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTL----TDYDIRFYMYEILKALDYC 145
Query: 134 HDNWVLHRDLKTSNLLLNNQGV-LKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGA 192
H ++HRD+K N++++++ L++ D+G++ Y P + Y V + +++ PELL+
Sbjct: 146 HSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFY-HPGQEYNVRVASRYFKGPELLVDY 204
Query: 193 KKYSTAVDMWSVGCIMAELLAKK-PLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGA 251
+ Y ++DMWS+GC++A ++ +K P F G DQ+ +I K LG TE ++ +
Sbjct: 205 QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLG--TEDLYDYID----- 257
Query: 252 KANFAKQP-YNLL-----RKRFPAASFT-GSPVLSESGFDLLNRLLTYDPEKRITVDDAL 304
K N P +N + RKR+ + ++S D L++LL YD + R+T +A+
Sbjct: 258 KYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAM 317
Query: 305 NHYWFHEV 312
H +F+ V
Sbjct: 318 EHPYFYTV 325
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 103 bits (258), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 138/248 (55%), Gaps = 23/248 (9%)
Query: 76 PSIVNVKEVVMDD-HDSVYMVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEGVKYL 133
P+I+ + ++V D + +V E++ + D K L +++ + +++ M ++L+ + Y
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTL----TDYDIRFYMYEILKALDYC 147
Query: 134 HDNWVLHRDLKTSNLLLNNQGV-LKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGA 192
H ++HRD+K N++++++ L++ D+G++ Y P + Y V + +++ PELL+
Sbjct: 148 HSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFY-HPGQEYNVRVASRYFKGPELLVDY 206
Query: 193 KKYSTAVDMWSVGCIMAELLAKK-PLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGA 251
+ Y ++DMWS+GC++A ++ +K P F G DQ+ +I K LG TE ++ +
Sbjct: 207 QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLG--TEDLYDYID----- 259
Query: 252 KANFAKQP-YNLL-----RKRFPAASFT-GSPVLSESGFDLLNRLLTYDPEKRITVDDAL 304
K N P +N + RKR+ + ++S D L++LL YD + R+T +A+
Sbjct: 260 KYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAM 319
Query: 305 NHYWFHEV 312
H +F+ V
Sbjct: 320 EHPYFYTV 327
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 139/296 (46%), Gaps = 46/296 (15%)
Query: 19 ISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSI 78
+ +G++G V + +D+ + + A+K + + +D + LRE+ +L DHP+I
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKD------TSTILREVELLKKLDHPNI 83
Query: 79 VNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWV 138
+ + E+ ++D S Y+V E + ++ FS + ++ Q+ G+ Y+H + +
Sbjct: 84 MKLFEI-LEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNI 142
Query: 139 LHRDLKTSNLLLNNQGV---LKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGAKKY 195
+HRDLK N+LL ++ +KI DFG+S + K + T +Y APE+L G Y
Sbjct: 143 VHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK-MKDRIGTAYYIAPEVLRGT--Y 199
Query: 196 STAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGAKANF 255
D+WS G I+ LL+ P F G E D + ++ ET
Sbjct: 200 DEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRV--------ET--------------- 236
Query: 256 AKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHE 311
K ++L + R +S+ DL+ ++LT+ P RIT L H W +
Sbjct: 237 GKYAFDLPQWR----------TISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQK 282
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/299 (29%), Positives = 127/299 (42%), Gaps = 44/299 (14%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
+E + I G +G+ RDK+S E+VA+K ++ R E E + REI S
Sbjct: 21 YELVKDIGSGNFGVARLMRDKQSNELVAVKYIE----RGEKIDE-----NVKREIINHRS 71
Query: 73 FDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKY 132
HP+IV KEV++ + +VMEY + FS E + QL+ GV Y
Sbjct: 72 LRHPNIVRFKEVILTP-THLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSY 130
Query: 133 LHDNWVLHRDLKTSNLLLNNQGV--LKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLL 190
H V HRDLK N LL+ LKIC FG S+ +P + V T Y APE+LL
Sbjct: 131 CHAMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKDT-VGTPAYIAPEVLL 189
Query: 191 GAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPG 250
+ D+WS G + +L F E P
Sbjct: 190 KKEYDGKVADVWSCGVTLYVMLVGAYPF----------------------------EDPE 221
Query: 251 AKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWF 309
NF K + +L ++ + +S L++R+ DP KRI++ + NH WF
Sbjct: 222 EPKNFRKTIHRILNVQYAIPDYVH---ISPECRHLISRIFVADPAKRISIPEIRNHEWF 277
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 108/206 (52%), Gaps = 16/206 (7%)
Query: 19 ISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSI 78
+ +GTYGIVY RD + +A+K++ R Y P+ EI + H +I
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSR------YSQPLH--EEIALHKHLKHKNI 81
Query: 79 VNVKEVVMDDHDSVYMVMEYM-EHDLKWLMESMKQPFSTSE--VKCLMLQLLEGVKYLHD 135
V ++ + + ME + L L+ S P +E + Q+LEG+KYLHD
Sbjct: 82 VQYLGS-FSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHD 140
Query: 136 NWVLHRDLKTSNLLLNN-QGVLKICDFGMSRQYGSPLKPYT-SLVVTLWYRAPELL-LGA 192
N ++HRD+K N+L+N GVLKI DFG S++ + P T + TL Y APE++ G
Sbjct: 141 NQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAG-INPCTETFTGTLQYMAPEIIDKGP 199
Query: 193 KKYSTAVDMWSVGCIMAELLAKKPLF 218
+ Y A D+WS+GC + E+ KP F
Sbjct: 200 RGYGKAADIWSLGCTIIEMATGKPPF 225
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 139/297 (46%), Gaps = 51/297 (17%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
F+ L K+ EG+YG VY+A K++G+IVA+K+V + +E ++EI+I+
Sbjct: 31 FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQE----------IIKEISIMQQ 80
Query: 73 FDHPSIVNVKEVVMDDHDSVYMVMEYM-EHDLKWLMESMKQPFSTSEVKCLMLQLLEGVK 131
D P +V + D +++VMEY + ++ + + E+ ++ L+G++
Sbjct: 81 CDSPHVVKYYGSYFKNTD-LWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLE 139
Query: 132 YLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELL-- 189
YLH +HRD+K N+LLN +G K+ DFG++ Q + ++ T ++ APE++
Sbjct: 140 YLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNXVIGTPFWMAPEVIQE 199
Query: 190 LGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELP 249
+G Y+ D+WS+G E+ KP ++ ++ + IF
Sbjct: 200 IG---YNCVADIWSLGITAIEMAEGKPPYA---DIHPMRAIFMI---------------- 237
Query: 250 GAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNH 306
P N P +F + S++ D + + L PE+R T L H
Sbjct: 238 ---------PTN------PPPTFRKPELWSDNFTDFVKQCLVKSPEQRATATQLLQH 279
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 138/296 (46%), Gaps = 46/296 (15%)
Query: 19 ISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSI 78
+ +G++G V + +D+ + + A+K + + +D + LRE+ +L DHP+I
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKD------TSTILREVELLKKLDHPNI 83
Query: 79 VNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWV 138
+ + E+ ++D S Y+V E + ++ FS + ++ Q+ G+ Y+H + +
Sbjct: 84 MKLFEI-LEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNI 142
Query: 139 LHRDLKTSNLLLNNQGV---LKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGAKKY 195
+HRDLK N+LL ++ +KI DFG+S + K + T +Y APE+L G Y
Sbjct: 143 VHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK-MKDRIGTAYYIAPEVLRGT--Y 199
Query: 196 STAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGAKANF 255
D+WS G I+ LL+ P F G E D I K + T
Sbjct: 200 DEKCDVWSAGVILYILLSGTPPFYGKNEYD----ILKRVET------------------- 236
Query: 256 AKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHE 311
K ++L + R +S+ DL+ ++LT+ P RIT L H W +
Sbjct: 237 GKYAFDLPQWR----------TISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQK 282
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 108/206 (52%), Gaps = 16/206 (7%)
Query: 19 ISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSI 78
+ +GTYGIVY RD + +A+K++ R Y P+ EI + H +I
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSR------YSQPLH--EEIALHKHLKHKNI 67
Query: 79 VNVKEVVMDDHDSVYMVMEYM-EHDLKWLMESMKQPFSTSE--VKCLMLQLLEGVKYLHD 135
V ++ + + ME + L L+ S P +E + Q+LEG+KYLHD
Sbjct: 68 VQYLGS-FSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHD 126
Query: 136 NWVLHRDLKTSNLLLNN-QGVLKICDFGMSRQYGSPLKPYT-SLVVTLWYRAPELL-LGA 192
N ++HRD+K N+L+N GVLKI DFG S++ + P T + TL Y APE++ G
Sbjct: 127 NQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAG-INPCTETFTGTLQYMAPEIIDKGP 185
Query: 193 KKYSTAVDMWSVGCIMAELLAKKPLF 218
+ Y A D+WS+GC + E+ KP F
Sbjct: 186 RGYGKAADIWSLGCTIIEMATGKPPF 211
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 125/297 (42%), Gaps = 46/297 (15%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILL 71
+F+ + +G +G VY AR+++S I+ALK V K + G RE+ I
Sbjct: 13 DFDIGRPLGKGKFGNVYLARERQSKFILALK-----VLFKTQLEKAGVEHQLRREVEIQS 67
Query: 72 SFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVK 131
HP+I+ + D VY+++EY + F + +L +
Sbjct: 68 HLRHPNILRLYGY-FHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALS 126
Query: 132 YLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLG 191
Y H V+HRD+K NLLL + G LKI DFG S +P T+L TL Y PE++ G
Sbjct: 127 YCHSKRVIHRDIKPENLLLGSNGELKIADFGWSVH--APSSRRTTLCGTLDYLPPEMIEG 184
Query: 192 AKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGA 251
+ + VD+WS+G + E L P F T
Sbjct: 185 -RMHDEKVDLWSLGVLCYEFLVGMPPFEAHT----------------------------- 214
Query: 252 KANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYW 308
Y +R FT ++E DL++RLL ++ +R+T+ + L H W
Sbjct: 215 --------YQETYRRISRVEFTFPDFVTEGARDLISRLLKHNASQRLTLAEVLEHPW 263
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 124/229 (54%), Gaps = 16/229 (6%)
Query: 8 RSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKV---KMNVGRKEDCLEYGFPISSL 64
+S+ ++ +L KI EG++G + + G +K++ +M+ +E+ S
Sbjct: 21 QSMEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREE---------SR 71
Query: 65 REINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEH-DLKWLMESMKQP-FSTSEVKCL 122
RE+ +L + HP+IV +E +++ S+Y+VM+Y E DL + + K F ++
Sbjct: 72 REVAVLANMKHPNIVQYRES-FEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDW 130
Query: 123 MLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLW 182
+Q+ +K++HD +LHRD+K+ N+ L G +++ DFG++R S ++ + + T +
Sbjct: 131 FVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTPY 190
Query: 183 YRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIF 231
Y +PE+ K Y+ D+W++GC++ EL K F + + + KI
Sbjct: 191 YLSPEICEN-KPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKII 238
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 135/306 (44%), Gaps = 50/306 (16%)
Query: 8 RSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKV-KMNVGRKEDCLEYGFPISSLRE 66
R +++F + + G + V A DK++ ++VA+K + K + KE +E E
Sbjct: 17 RDIYDFRDV--LGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSME--------NE 66
Query: 67 INILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQL 126
I +L HP+IV + ++ + +Y++M+ + + K ++ + L+ Q+
Sbjct: 67 IAVLHKIKHPNIVALDDI-YESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQV 125
Query: 127 LEGVKYLHDNWVLHRDLKTSNLL---LNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWY 183
L+ VKYLHD ++HRDLK NLL L+ + I DFG+S+ P ++ T Y
Sbjct: 126 LDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKME-DPGSVLSTACGTPGY 184
Query: 184 RAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWP 243
APE +L K YS AVD WS+G I LL P F + ++I K W
Sbjct: 185 VAPE-VLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWD 243
Query: 244 GLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDA 303
+S+S D + L+ DPEKR T + A
Sbjct: 244 D---------------------------------ISDSAKDFIRHLMEKDPEKRFTCEQA 270
Query: 304 LNHYWF 309
L H W
Sbjct: 271 LQHPWI 276
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 88/299 (29%), Positives = 127/299 (42%), Gaps = 44/299 (14%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
+E + I G +G+ RDK++ E+VA+K ++ R E E + REI S
Sbjct: 21 YELVKDIGAGNFGVARLMRDKQANELVAVKYIE----RGEKIDE-----NVKREIINHRS 71
Query: 73 FDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKY 132
HP+IV KEV++ + +VMEY + FS E + QL+ GV Y
Sbjct: 72 LRHPNIVRFKEVILTP-THLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSY 130
Query: 133 LHDNWVLHRDLKTSNLLLNNQGV--LKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLL 190
H V HRDLK N LL+ LKI DFG S+ +P S V T Y APE+LL
Sbjct: 131 AHAMQVAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQP-KSAVGTPAYIAPEVLL 189
Query: 191 GAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPG 250
+ D+WS G + +L F E P
Sbjct: 190 KKEYDGKVADVWSCGVTLYVMLVGAYPF----------------------------EDPE 221
Query: 251 AKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWF 309
NF K + +L ++ + +S L++R+ DP KRI++ + NH WF
Sbjct: 222 EPKNFRKTIHRILNVQYAIPDYVH---ISPECRHLISRIFVADPAKRISIPEIRNHEWF 277
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 91/307 (29%), Positives = 139/307 (45%), Gaps = 48/307 (15%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSL-REINILL 71
+E I +G + +V R ++++G+ A+K V + G L RE +I
Sbjct: 26 YELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSP----GLSTEDLKREASICH 81
Query: 72 SFDHPSIVNVKEVVMDDHDSVYMVMEYME-HDLKW-LMESMKQPFSTSEVKC--LMLQLL 127
HP IV + E D +YMV E+M+ DL + +++ F SE M Q+L
Sbjct: 82 MLKHPHIVELLETYSSD-GMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQIL 140
Query: 128 EGVKYLHDNWVLHRDLKTSNLLL---NNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYR 184
E ++Y HDN ++HRD+K N+LL N +K+ DFG++ Q G V T +
Sbjct: 141 EALRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRVGTPHFM 200
Query: 185 APELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPG 244
APE ++ + Y VD+W G I+ LL+ F GT E ++F+ +
Sbjct: 201 APE-VVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE-----RLFEGI---------- 244
Query: 245 LSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDAL 304
K + P +SES DL+ R+L DP +RITV +AL
Sbjct: 245 ------IKGKYKMNPRQWSH-------------ISESAKDLVRRMLMLDPAERITVYEAL 285
Query: 305 NHYWFHE 311
NH W E
Sbjct: 286 NHPWLKE 292
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 138/296 (46%), Gaps = 46/296 (15%)
Query: 19 ISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSI 78
+ +G++G V + +D+ + + A+K + + +D + LRE+ +L DHP+I
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDT------STILREVELLKKLDHPNI 83
Query: 79 VNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWV 138
+ + E+ ++D S Y+V E + ++ FS + ++ Q+ G+ Y+H + +
Sbjct: 84 MKLFEI-LEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNI 142
Query: 139 LHRDLKTSNLLLNNQGV---LKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGAKKY 195
+HRDLK N+LL ++ +KI DFG+S + K + T +Y APE+L G Y
Sbjct: 143 VHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK-MKDRIGTAYYIAPEVLRGT--Y 199
Query: 196 STAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGAKANF 255
D+WS G I+ LL+ P F G E D I K + T
Sbjct: 200 DEKCDVWSAGVILYILLSGTPPFYGKNEYD----ILKRVET------------------- 236
Query: 256 AKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHE 311
K ++L + R +S+ DL+ ++LT+ P RIT L H W +
Sbjct: 237 GKYAFDLPQWR----------TISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQK 282
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 85/309 (27%), Positives = 136/309 (44%), Gaps = 50/309 (16%)
Query: 5 QGCRSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKV-KMNVGRKEDCLEYGFPISS 63
+ R +++F + + G + V A DK++ ++VA+K + K + KE +E
Sbjct: 14 EDIRDIYDFRDV--LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSME------- 64
Query: 64 LREINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLM 123
EI +L HP+IV + ++ + +Y++M+ + + K ++ + L+
Sbjct: 65 -NEIAVLHKIKHPNIVALDDI-YESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLI 122
Query: 124 LQLLEGVKYLHDNWVLHRDLKTSNLL---LNNQGVLKICDFGMSRQYGSPLKPYTSLVVT 180
Q+L+ VKYLHD ++HRDLK NLL L+ + I DFG+S+ P ++ T
Sbjct: 123 FQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM-EDPGSVLSTACGT 181
Query: 181 LWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTET 240
Y APE +L K YS AVD WS+G I LL P F + ++I K
Sbjct: 182 PGYVAPE-VLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSP 240
Query: 241 IWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITV 300
W +S+S D + L+ DPEKR T
Sbjct: 241 YWDD---------------------------------ISDSAKDFIRHLMEKDPEKRFTC 267
Query: 301 DDALNHYWF 309
+ AL H W
Sbjct: 268 EQALQHPWI 276
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 85/309 (27%), Positives = 136/309 (44%), Gaps = 50/309 (16%)
Query: 5 QGCRSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKV-KMNVGRKEDCLEYGFPISS 63
+ R +++F + + G + V A DK++ ++VA+K + K + KE +E
Sbjct: 14 EDIRDIYDFRDV--LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSME------- 64
Query: 64 LREINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLM 123
EI +L HP+IV + ++ + +Y++M+ + + K ++ + L+
Sbjct: 65 -NEIAVLHKIKHPNIVALDDI-YESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLI 122
Query: 124 LQLLEGVKYLHDNWVLHRDLKTSNLL---LNNQGVLKICDFGMSRQYGSPLKPYTSLVVT 180
Q+L+ VKYLHD ++HRDLK NLL L+ + I DFG+S+ P ++ T
Sbjct: 123 FQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM-EDPGSVLSTACGT 181
Query: 181 LWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTET 240
Y APE +L K YS AVD WS+G I LL P F + ++I K
Sbjct: 182 PGYVAPE-VLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSP 240
Query: 241 IWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITV 300
W +S+S D + L+ DPEKR T
Sbjct: 241 YWDD---------------------------------ISDSAKDFIRHLMEKDPEKRFTC 267
Query: 301 DDALNHYWF 309
+ AL H W
Sbjct: 268 EQALQHPWI 276
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 85/309 (27%), Positives = 136/309 (44%), Gaps = 50/309 (16%)
Query: 5 QGCRSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKV-KMNVGRKEDCLEYGFPISS 63
+ R +++F + + G + V A DK++ ++VA+K + K + KE +E
Sbjct: 14 EDIRDIYDFRDV--LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSME------- 64
Query: 64 LREINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLM 123
EI +L HP+IV + ++ + +Y++M+ + + K ++ + L+
Sbjct: 65 -NEIAVLHKIKHPNIVALDDI-YESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLI 122
Query: 124 LQLLEGVKYLHDNWVLHRDLKTSNLL---LNNQGVLKICDFGMSRQYGSPLKPYTSLVVT 180
Q+L+ VKYLHD ++HRDLK NLL L+ + I DFG+S+ P ++ T
Sbjct: 123 FQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM-EDPGSVLSTACGT 181
Query: 181 LWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTET 240
Y APE +L K YS AVD WS+G I LL P F + ++I K
Sbjct: 182 PGYVAPE-VLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSP 240
Query: 241 IWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITV 300
W +S+S D + L+ DPEKR T
Sbjct: 241 YWDD---------------------------------ISDSAKDFIRHLMEKDPEKRFTC 267
Query: 301 DDALNHYWF 309
+ AL H W
Sbjct: 268 EQALQHPWI 276
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 121/209 (57%), Gaps = 14/209 (6%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
+E + ++ +G +G VY+A++K++ + A K + + +E+ +Y + EI+IL S
Sbjct: 39 WEIIGELGDGAFGKVYKAQNKETSVLAAAKVI--DTKSEEELEDY------MVEIDILAS 90
Query: 73 FDHPSIVNVKEVVMDDHDSVYMVMEYMEHD-LKWLMESMKQPFSTSEVKCLMLQLLEGVK 131
DHP+IV + + +++ +++++E+ + +M +++P + S+++ + Q L+ +
Sbjct: 91 CDHPNIVKLLDAFYYENN-LWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALN 149
Query: 132 YLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLG 191
YLHDN ++HRDLK N+L G +K+ DFG+S + ++ S + T ++ APE+++
Sbjct: 150 YLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMC 209
Query: 192 A----KKYSTAVDMWSVGCIMAELLAKKP 216
+ Y D+WS+G + E+ +P
Sbjct: 210 ETSKDRPYDYKADVWSLGITLIEMAEIEP 238
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 121/209 (57%), Gaps = 14/209 (6%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
+E + ++ +G +G VY+A++K++ + A K + + +E+ +Y + EI+IL S
Sbjct: 39 WEIIGELGDGAFGKVYKAQNKETSVLAAAKVI--DTKSEEELEDY------MVEIDILAS 90
Query: 73 FDHPSIVNVKEVVMDDHDSVYMVMEYMEHD-LKWLMESMKQPFSTSEVKCLMLQLLEGVK 131
DHP+IV + + +++ +++++E+ + +M +++P + S+++ + Q L+ +
Sbjct: 91 CDHPNIVKLLDAFYYENN-LWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALN 149
Query: 132 YLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLG 191
YLHDN ++HRDLK N+L G +K+ DFG+S + ++ S + T ++ APE+++
Sbjct: 150 YLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFIGTPYWMAPEVVMC 209
Query: 192 A----KKYSTAVDMWSVGCIMAELLAKKP 216
+ Y D+WS+G + E+ +P
Sbjct: 210 ETSKDRPYDYKADVWSLGITLIEMAEIEP 238
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 124/297 (41%), Gaps = 46/297 (15%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILL 71
+F+ + +G +G VY AR+++S I+ALK V K + G RE+ I
Sbjct: 13 DFDIGRPLGKGKFGNVYLARERQSKFILALK-----VLFKTQLEKAGVEHQLRREVEIQS 67
Query: 72 SFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVK 131
HP+I+ + D VY+++EY + F + +L +
Sbjct: 68 HLRHPNILRLYGY-FHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALS 126
Query: 132 YLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLG 191
Y H V+HRD+K NLLL + G LKI DFG S +P +L TL Y PE++ G
Sbjct: 127 YCHSKRVIHRDIKPENLLLGSNGELKIADFGWSVH--APSSRRDTLCGTLDYLPPEMIEG 184
Query: 192 AKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGA 251
+ + VD+WS+G + E L P F T
Sbjct: 185 -RMHDEKVDLWSLGVLCYEFLVGMPPFEAHT----------------------------- 214
Query: 252 KANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYW 308
Y +R FT ++E DL++RLL ++ +R+T+ + L H W
Sbjct: 215 --------YQETYRRISRVEFTFPDFVTEGARDLISRLLKHNASQRLTLAEVLEHPW 263
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 109/217 (50%), Gaps = 7/217 (3%)
Query: 2 NMLQGCRSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPI 61
++L R++ + + + +G + Y D + E+ A K V ++ K E
Sbjct: 33 DVLVDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKE----- 87
Query: 62 SSLREINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKC 121
EI I S D+P +V DD D VY+V+E + ++ + E +
Sbjct: 88 KMSTEIAIHKSLDNPHVVGFHGFFEDD-DFVYVVLEICRRRSLLELHKRRKAVTEPEARY 146
Query: 122 LMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTL 181
M Q ++GV+YLH+N V+HRDLK NL LN+ +KI DFG++ + + +L T
Sbjct: 147 FMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTLCGTP 206
Query: 182 WYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLF 218
Y APE+L K +S VD+WS+GCI+ LL KP F
Sbjct: 207 NYIAPEVLC-KKGHSFEVDIWSLGCILYTLLVGKPPF 242
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/321 (26%), Positives = 149/321 (46%), Gaps = 50/321 (15%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINIL- 70
+FE + +G++G V+ A KK+ + A+K +K +V +D +E ++ E +L
Sbjct: 19 DFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVE-----CTMVEKRVLS 73
Query: 71 LSFDHPSIVNVKEVVMDDHDSVYMVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEG 129
L+++HP + ++ ++++ VMEY+ DL + ++S + F S +++ G
Sbjct: 74 LAWEHPFLTHMF-CTFQTKENLFFVMEYLNGGDLMYHIQSCHK-FDLSRATFYAAEIILG 131
Query: 130 VKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELL 189
+++LH +++RDLK N+LL+ G +KI DFGM ++ T Y APE+L
Sbjct: 132 LQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFCGTPDYIAPEIL 191
Query: 190 LGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELP 249
LG +KY+ +VD WS G ++ E+L + F G E + I + P W
Sbjct: 192 LG-QKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSI--RMDNPFYPRW------- 241
Query: 250 GAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITV-DDALNHYW 308
L + DLL +L +PEKR+ V D H
Sbjct: 242 ----------------------------LEKEAKDLLVKLFVREPEKRLGVRGDIRQHPL 273
Query: 309 FHEVPLP--KSKDFMPTFPPQ 327
F E+ + K+ P F P+
Sbjct: 274 FREINWEELERKEIDPPFRPK 294
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 120/209 (57%), Gaps = 14/209 (6%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
+E + ++ +G +G VY+A++K++ + A K + + +E+ +Y + EI+IL S
Sbjct: 39 WEIIGELGDGAFGKVYKAQNKETSVLAAAKVI--DTKSEEELEDY------MVEIDILAS 90
Query: 73 FDHPSIVNVKEVVMDDHDSVYMVMEYMEHD-LKWLMESMKQPFSTSEVKCLMLQLLEGVK 131
DHP+IV + + +++ +++++E+ + +M +++P + S+++ + Q L+ +
Sbjct: 91 CDHPNIVKLLDAFYYENN-LWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALN 149
Query: 132 YLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLG 191
YLHDN ++HRDLK N+L G +K+ DFG+S + ++ + T ++ APE+++
Sbjct: 150 YLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFIGTPYWMAPEVVMC 209
Query: 192 A----KKYSTAVDMWSVGCIMAELLAKKP 216
+ Y D+WS+G + E+ +P
Sbjct: 210 ETSKDRPYDYKADVWSLGITLIEMAEIEP 238
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 108/217 (49%), Gaps = 7/217 (3%)
Query: 2 NMLQGCRSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPI 61
++L R++ + + + +G + Y D + E+ A K V ++ K E
Sbjct: 17 DVLVDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKE----- 71
Query: 62 SSLREINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKC 121
EI I S D+P +V DD D VY+V+E + ++ + E +
Sbjct: 72 KMSTEIAIHKSLDNPHVVGFHGFFEDD-DFVYVVLEICRRRSLLELHKRRKAVTEPEARY 130
Query: 122 LMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTL 181
M Q ++GV+YLH+N V+HRDLK NL LN+ +KI DFG++ + + L T
Sbjct: 131 FMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTP 190
Query: 182 WYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLF 218
Y APE+L K +S VD+WS+GCI+ LL KP F
Sbjct: 191 NYIAPEVLC-KKGHSFEVDIWSLGCILYTLLVGKPPF 226
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 108/217 (49%), Gaps = 7/217 (3%)
Query: 2 NMLQGCRSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPI 61
++L R++ + + + +G + Y D + E+ A K V ++ K E
Sbjct: 33 DVLVDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKE----- 87
Query: 62 SSLREINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKC 121
EI I S D+P +V DD D VY+V+E + ++ + E +
Sbjct: 88 KMSTEIAIHKSLDNPHVVGFHGFFEDD-DFVYVVLEICRRRSLLELHKRRKAVTEPEARY 146
Query: 122 LMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTL 181
M Q ++GV+YLH+N V+HRDLK NL LN+ +KI DFG++ + + L T
Sbjct: 147 FMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTP 206
Query: 182 WYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLF 218
Y APE+L K +S VD+WS+GCI+ LL KP F
Sbjct: 207 NYIAPEVLC-KKGHSFEVDIWSLGCILYTLLVGKPPF 242
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 108/217 (49%), Gaps = 7/217 (3%)
Query: 2 NMLQGCRSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPI 61
++L R++ + + + +G + Y D + E+ A K V ++ K E
Sbjct: 33 DVLVDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKE----- 87
Query: 62 SSLREINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKC 121
EI I S D+P +V DD D VY+V+E + ++ + E +
Sbjct: 88 KMSTEIAIHKSLDNPHVVGFHGFFEDD-DFVYVVLEICRRRSLLELHKRRKAVTEPEARY 146
Query: 122 LMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTL 181
M Q ++GV+YLH+N V+HRDLK NL LN+ +KI DFG++ + + L T
Sbjct: 147 FMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXLCGTP 206
Query: 182 WYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLF 218
Y APE+L K +S VD+WS+GCI+ LL KP F
Sbjct: 207 NYIAPEVLC-KKGHSFEVDIWSLGCILYTLLVGKPPF 242
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 97.8 bits (242), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 89/298 (29%), Positives = 130/298 (43%), Gaps = 48/298 (16%)
Query: 17 NKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHP 76
N I G++G V A K + A KK+ D + +EI I+ S DHP
Sbjct: 32 NTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFK--------QEIEIMKSLDHP 83
Query: 77 SIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDN 136
+I+ + E D+ D +Y+VME + K+ F S+ +M +L V Y H
Sbjct: 84 NIIRLYETFEDNTD-IYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKL 142
Query: 137 WVLHRDLKTSNLLL---NNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGAK 193
V HRDLK N L + LK+ DFG++ ++ P K + V T +Y +P++L G
Sbjct: 143 NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARF-KPGKMMRTKVGTPYYVSPQVLEGL- 200
Query: 194 KYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGAKA 253
Y D WS G +M LL P FS T+ + + KI + T E W +S P A++
Sbjct: 201 -YGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDWLNVS--PQAES 257
Query: 254 NFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHE 311
L+ RLLT P++RIT AL H WF +
Sbjct: 258 -------------------------------LIRRLLTKSPKQRITSLQALEHEWFEK 284
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 146/314 (46%), Gaps = 50/314 (15%)
Query: 19 ISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINIL-LSFDHPS 77
+ +G++G V+ A KK+ + A+K +K +V +D +E ++ E +L L+++HP
Sbjct: 25 LGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVE-----CTMVEKRVLSLAWEHPF 79
Query: 78 IVNVKEVVMDDHDSVYMVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDN 136
+ ++ ++++ VMEY+ DL + ++S + F S +++ G+++LH
Sbjct: 80 LTHMF-CTFQTKENLFFVMEYLNGGDLMYHIQSCHK-FDLSRATFYAAEIILGLQFLHSK 137
Query: 137 WVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGAKKYS 196
+++RDLK N+LL+ G +KI DFGM ++ T Y APE+LLG +KY+
Sbjct: 138 GIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFCGTPDYIAPEILLG-QKYN 196
Query: 197 TAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGAKANFA 256
+VD WS G ++ E+L + F G E + I + P W
Sbjct: 197 HSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSI--RMDNPFYPRW-------------- 240
Query: 257 KQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITV-DDALNHYWFHEVPLP 315
L + DLL +L +PEKR+ V D H F E+
Sbjct: 241 ---------------------LEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFREINWE 279
Query: 316 --KSKDFMPTFPPQ 327
+ K+ P F P+
Sbjct: 280 ELERKEIDPPFRPK 293
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 89/298 (29%), Positives = 130/298 (43%), Gaps = 48/298 (16%)
Query: 17 NKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHP 76
N I G++G V A K + A KK+ D + +EI I+ S DHP
Sbjct: 15 NTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFK--------QEIEIMKSLDHP 66
Query: 77 SIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDN 136
+I+ + E D+ D +Y+VME + K+ F S+ +M +L V Y H
Sbjct: 67 NIIRLYETFEDNTD-IYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKL 125
Query: 137 WVLHRDLKTSNLLL---NNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGAK 193
V HRDLK N L + LK+ DFG++ ++ P K + V T +Y +P++L G
Sbjct: 126 NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARF-KPGKMMRTKVGTPYYVSPQVLEGL- 183
Query: 194 KYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGAKA 253
Y D WS G +M LL P FS T+ + + KI + T E W +S P A++
Sbjct: 184 -YGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDWLNVS--PQAES 240
Query: 254 NFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHE 311
L+ RLLT P++RIT AL H WF +
Sbjct: 241 -------------------------------LIRRLLTKSPKQRITSLQALEHEWFEK 267
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 141/305 (46%), Gaps = 58/305 (19%)
Query: 18 KISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLR-EINILLSFDHP 76
K+ G +G V+ ++ SG L++V + + + P+ + EI +L S DHP
Sbjct: 29 KLGSGAFGDVHLVEERSSG----LERVIKTINKDRSQV----PMEQIEAEIEVLKSLDHP 80
Query: 77 SIVNVKEVVMDDHDSVYMVMEYMEHD--LKWLMESMKQPFSTSE--VKCLMLQLLEGVKY 132
+I+ + EV D H+ +Y+VME E L+ ++ + + + SE V LM Q++ + Y
Sbjct: 81 NIIKIFEVFEDYHN-MYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAY 139
Query: 133 LHDNWVLHRDLKTSNLLLNN---QGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELL 189
H V+H+DLK N+L + +KI DFG++ + S + T+ T Y APE+
Sbjct: 140 FHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSD-EHSTNAAGTALYMAPEVF 198
Query: 190 LGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTT--EVDQIDKIFKTLGTPTETIWPGLSE 247
+ + D+WS G +M LL F+GT+ EV Q
Sbjct: 199 --KRDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQ--------------------- 235
Query: 248 LPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHY 307
KA + K+P + R L+ DLL ++LT DPE+R + L+H
Sbjct: 236 ----KATY-KEPNYAVECR----------PLTPQAVDLLKQMLTKDPERRPSAAQVLHHE 280
Query: 308 WFHEV 312
WF +
Sbjct: 281 WFKQA 285
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 126/300 (42%), Gaps = 46/300 (15%)
Query: 9 SVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREIN 68
++ +F+ + + +G +G VY AR+K++ I+ALK + + KE G REI
Sbjct: 12 TIDDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKE-----GVEHQLRREIE 66
Query: 69 ILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLE 128
I HP+I+ + D +Y+++E+ + F M +L +
Sbjct: 67 IQSHLRHPNILRMYNY-FHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELAD 125
Query: 129 GVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPEL 188
+ Y H+ V+HRD+K NLL+ +G LKI DFG S +P + TL Y PE+
Sbjct: 126 ALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVH--APSLRRRXMCGTLDYLPPEM 183
Query: 189 LLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSEL 248
+ G K + VD+W G + E L P F + TET
Sbjct: 184 IEG-KTHDEKVDLWCAGVLCYEFLVGMPPFDSPSH--------------TET-------- 220
Query: 249 PGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYW 308
+R P LS+ DL+++LL Y P +R+ + + H W
Sbjct: 221 ---------------HRRIVNVDLKFPPFLSDGSKDLISKLLRYHPPQRLPLKGVMEHPW 265
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 116/226 (51%), Gaps = 15/226 (6%)
Query: 13 FEKLNKISEGTYGIVYRAR---DKKSGEIVALKKVK--MNVGRKEDCLEYGFPISSLREI 67
FE L + +G YG V++ R +G+I A+K +K M V +D + E
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAH------TKAER 72
Query: 68 NILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLML-QL 126
NIL HP IV++ +Y+++EY+ + M+ ++ + C L ++
Sbjct: 73 NILEEVKHPFIVDLI-YAFQTGGKLYLILEYLSGG-ELFMQLEREGIFMEDTACFYLAEI 130
Query: 127 LEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAP 186
+ +LH +++RDLK N++LN+QG +K+ DFG+ ++ + T+ Y AP
Sbjct: 131 SMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAP 190
Query: 187 ELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFK 232
E+L+ + ++ AVD WS+G +M ++L P F+G IDKI K
Sbjct: 191 EILMRS-GHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILK 235
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 146/323 (45%), Gaps = 57/323 (17%)
Query: 7 CRSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKV-KMNVGRKED------------ 53
C + ++ ++I +G+YG+V A ++ A+K + K + R+
Sbjct: 9 CVQLNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRP 68
Query: 54 ----CLEYGFPISSL-REINILLSFDHPSIVNVKEVVMD-DHDSVYMVMEYMEHDLKWLM 107
C++ PI + +EI IL DHP++V + EV+ D + D +YMV E + +
Sbjct: 69 APGGCIQPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEV 128
Query: 108 ESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQY 167
++K P S + + L++G++YLH ++HRD+K SNLL+ G +KI DFG+S ++
Sbjct: 129 PTLK-PLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEF 187
Query: 168 GSPLKPYTSLVVTLWYRAPELLLGAKKY--STAVDMWSVGCIMAELLAKKPLFSGTTEVD 225
++ V T + APE L +K A+D+W++G + + + F
Sbjct: 188 KGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPF------- 240
Query: 226 QIDKIFKTLGTPTETIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDL 285
+D+ L + ++ A F P ++E DL
Sbjct: 241 -MDERIMCLHSKIKS---------------------------QALEFPDQPDIAEDLKDL 272
Query: 286 LNRLLTYDPEKRITVDDALNHYW 308
+ R+L +PE RI V + H W
Sbjct: 273 ITRMLDKNPESRIVVPEIKLHPW 295
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 115/226 (50%), Gaps = 15/226 (6%)
Query: 13 FEKLNKISEGTYGIVYRAR---DKKSGEIVALKKVK--MNVGRKEDCLEYGFPISSLREI 67
FE L + +G YG V++ R +G+I A+K +K M V +D + E
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAH------TKAER 72
Query: 68 NILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLML-QL 126
NIL HP IV++ +Y+++EY+ + M+ ++ + C L ++
Sbjct: 73 NILEEVKHPFIVDLI-YAFQTGGKLYLILEYLSGG-ELFMQLEREGIFMEDTACFYLAEI 130
Query: 127 LEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAP 186
+ +LH +++RDLK N++LN+QG +K+ DFG+ ++ T+ Y AP
Sbjct: 131 SMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHXFCGTIEYMAP 190
Query: 187 ELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFK 232
E+L+ + ++ AVD WS+G +M ++L P F+G IDKI K
Sbjct: 191 EILMRS-GHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILK 235
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 144/300 (48%), Gaps = 47/300 (15%)
Query: 18 KISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPS 77
KI EG+ GIV AR+K SG VA+K + + ++ + L E+ I+ + H +
Sbjct: 52 KIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELL--------FNEVVIMRDYQHFN 103
Query: 78 IVNVKEVVMDDHDSVYMVMEYMEHD-LKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDN 136
+V + + + + ++++ME+++ L ++ ++ + ++ + +L+ + YLH
Sbjct: 104 VVEMYKSYLVGEE-LWVLMEFLQGGALTDIVSQVR--LNEEQIATVCEAVLQALAYLHAQ 160
Query: 137 WVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGAKKYS 196
V+HRD+K+ ++LL G +K+ DFG Q + LV T ++ APE ++ Y+
Sbjct: 161 GVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKXLVGTPYWMAPE-VISRSLYA 219
Query: 197 TAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGAKANFA 256
T VD+WS+G ++ E++ +P + + V + + L + P K
Sbjct: 220 TEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKR---------------LRDSPPPKLK-- 262
Query: 257 KQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVPLPK 316
S SPVL D L R+L DP++R T + L+H + + LP+
Sbjct: 263 -------------NSHKVSPVLR----DFLERMLVRDPQERATAQELLDHPFLLQTGLPE 305
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/307 (28%), Positives = 137/307 (44%), Gaps = 48/307 (15%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSL-REINILL 71
+E I +G + +V R ++++G+ A+K V + G L RE +I
Sbjct: 28 YELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSP----GLSTEDLKREASICH 83
Query: 72 SFDHPSIVNVKEVVMDDHDSVYMVMEYME-HDLKW-LMESMKQPFSTSEVKC--LMLQLL 127
HP IV + E D +YMV E+M+ DL + +++ F SE M Q+L
Sbjct: 84 MLKHPHIVELLETYSSD-GMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQIL 142
Query: 128 EGVKYLHDNWVLHRDLKTSNLLL---NNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYR 184
E ++Y HDN ++HRD+K +LL N +K+ FG++ Q G V T +
Sbjct: 143 EALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFM 202
Query: 185 APELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPG 244
APE ++ + Y VD+W G I+ LL+ F GT E ++F+ +
Sbjct: 203 APE-VVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE-----RLFEGI---------- 246
Query: 245 LSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDAL 304
K + P +SES DL+ R+L DP +RITV +AL
Sbjct: 247 ------IKGKYKMNPRQWSH-------------ISESAKDLVRRMLMLDPAERITVYEAL 287
Query: 305 NHYWFHE 311
NH W E
Sbjct: 288 NHPWLKE 294
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 125/300 (41%), Gaps = 46/300 (15%)
Query: 9 SVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREIN 68
++ +F+ + +G +G VY AR+K++ I+ALK + + KE G REI
Sbjct: 12 TIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKE-----GVEHQLRREIE 66
Query: 69 ILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLE 128
I HP+I+ + D +Y+++E+ + F M +L +
Sbjct: 67 IQSHLRHPNILRMYNY-FHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELAD 125
Query: 129 GVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPEL 188
+ Y H+ V+HRD+K NLL+ +G LKI DFG S +P + TL Y PE+
Sbjct: 126 ALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVH--APSLRRRXMCGTLDYLPPEM 183
Query: 189 LLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSEL 248
+ G K + VD+W G + E L P F + TET
Sbjct: 184 IEG-KTHDEKVDLWCAGVLCYEFLVGMPPFDSPSH--------------TET-------- 220
Query: 249 PGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYW 308
+R P LS+ DL+++LL Y P +R+ + + H W
Sbjct: 221 ---------------HRRIVNVDLKFPPFLSDGSKDLISKLLRYHPPQRLPLKGVMEHPW 265
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 89/307 (28%), Positives = 137/307 (44%), Gaps = 48/307 (15%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSL-REINILL 71
+E I +G + +V R ++++G+ A+K V + G L RE +I
Sbjct: 26 YELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSP----GLSTEDLKREASICH 81
Query: 72 SFDHPSIVNVKEVVMDDHDSVYMVMEYME-HDLKW-LMESMKQPFSTSEVKC--LMLQLL 127
HP IV + E D +YMV E+M+ DL + +++ F SE M Q+L
Sbjct: 82 MLKHPHIVELLETYSSD-GMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQIL 140
Query: 128 EGVKYLHDNWVLHRDLKTSNLLL---NNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYR 184
E ++Y HDN ++HRD+K +LL N +K+ FG++ Q G V T +
Sbjct: 141 EALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFM 200
Query: 185 APELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPG 244
APE ++ + Y VD+W G I+ LL+ F GT E ++F+ +
Sbjct: 201 APE-VVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE-----RLFEGI---------- 244
Query: 245 LSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDAL 304
K + P +SES DL+ R+L DP +RITV +AL
Sbjct: 245 ------IKGKYKMNPRQWSH-------------ISESAKDLVRRMLMLDPAERITVYEAL 285
Query: 305 NHYWFHE 311
NH W E
Sbjct: 286 NHPWLKE 292
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 139/320 (43%), Gaps = 66/320 (20%)
Query: 2 NMLQGCRSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPI 61
N Q + +FE++ I G++G V + ++G A+K + K +E+
Sbjct: 32 NPAQNTAHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEH---- 87
Query: 62 SSLREINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKC 121
+L E IL + + P +V + E D+ ++YMVMEYM + FS +
Sbjct: 88 -TLNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARF 145
Query: 122 LMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYT-SLVVT 180
Q++ +YLH +++RDLK NLL++ QG +K+ DFG +++ +K T L T
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKR----VKGRTWXLCGT 201
Query: 181 LWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTET 240
Y APE++L +K Y+ AVD W++G ++ E+ A P F
Sbjct: 202 PEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF---------------------- 238
Query: 241 IWPGLSELPGAKANFAKQPYNLLRK------RFPAASFTGSPVLSESGFDLLNRLLTYDP 294
FA QP + K RFP+ S DLL LL D
Sbjct: 239 --------------FADQPIQIYEKIVSGKVRFPSH-------FSSDLKDLLRNLLQVDL 277
Query: 295 EKRI-----TVDDALNHYWF 309
KR V+D NH WF
Sbjct: 278 TKRFGNLKNGVNDIKNHKWF 297
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 125/300 (41%), Gaps = 46/300 (15%)
Query: 9 SVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREIN 68
++ +F+ + +G +G VY AR+K++ I+ALK + + KE G REI
Sbjct: 13 TIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKE-----GVEHQLRREIE 67
Query: 69 ILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLE 128
I HP+I+ + D +Y+++E+ + F M +L +
Sbjct: 68 IQSHLRHPNILRMYNY-FHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELAD 126
Query: 129 GVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPEL 188
+ Y H+ V+HRD+K NLL+ +G LKI DFG S +P + TL Y PE+
Sbjct: 127 ALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVH--APSLRRRXMCGTLDYLPPEM 184
Query: 189 LLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSEL 248
+ G K + VD+W G + E L P F + TET
Sbjct: 185 IEG-KTHDEKVDLWCAGVLCYEFLVGMPPFDSPSH--------------TET-------- 221
Query: 249 PGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYW 308
+R P LS+ DL+++LL Y P +R+ + + H W
Sbjct: 222 ---------------HRRIVNVDLKFPPFLSDGSKDLISKLLRYHPPQRLPLKGVMEHPW 266
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 139/320 (43%), Gaps = 66/320 (20%)
Query: 2 NMLQGCRSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPI 61
N Q + +FE++ I G++G V + ++G A+K + K +E+
Sbjct: 32 NPAQNTAHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEH---- 87
Query: 62 SSLREINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKC 121
+L E IL + + P +V + E D+ ++YMVMEYM + FS +
Sbjct: 88 -TLNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARF 145
Query: 122 LMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYT-SLVVT 180
Q++ +YLH +++RDLK NLL++ QG +K+ DFG +++ +K T L T
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKR----VKGRTWXLCGT 201
Query: 181 LWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTET 240
Y APE++L +K Y+ AVD W++G ++ E+ A P F
Sbjct: 202 PEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF---------------------- 238
Query: 241 IWPGLSELPGAKANFAKQPYNLLRK------RFPAASFTGSPVLSESGFDLLNRLLTYDP 294
FA QP + K RFP+ S DLL LL D
Sbjct: 239 --------------FADQPIQIYEKIVSGKVRFPSH-------FSSDLKDLLRNLLQVDL 277
Query: 295 EKRI-----TVDDALNHYWF 309
KR V+D NH WF
Sbjct: 278 TKRFGNLKNGVNDIKNHKWF 297
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 122/299 (40%), Gaps = 44/299 (14%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
++ + I G +G+ RDK + E+VA+K ++ E+ REI S
Sbjct: 22 YDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQ---------REIINHRS 72
Query: 73 FDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKY 132
HP+IV KEV++ + ++MEY + FS E + QLL GV Y
Sbjct: 73 LRHPNIVRFKEVILTP-THLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSY 131
Query: 133 LHDNWVLHRDLKTSNLLLNNQGV--LKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLL 190
H + HRDLK N LL+ LKICDFG S+ +P S V T Y APE+LL
Sbjct: 132 CHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQP-KSTVGTPAYIAPEVLL 190
Query: 191 GAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPG 250
+ D+WS G + +L F E P
Sbjct: 191 RQEYDGKIADVWSCGVTLYVMLVGAYPF----------------------------EDPE 222
Query: 251 AKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWF 309
++ K +L ++ S +S L++R+ DP RI++ + H WF
Sbjct: 223 EPRDYRKTIQRILSVKY---SIPDDIRISPECCHLISRIFVADPATRISIPEIKTHSWF 278
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 95.1 bits (235), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 133/266 (50%), Gaps = 16/266 (6%)
Query: 18 KISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPS 77
KI EG+ GIV A +K +G+ VA+KK+ + ++ + L E+ I+ + H +
Sbjct: 52 KIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELL--------FNEVVIMRDYHHDN 103
Query: 78 IVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNW 137
+V++ + D +++VME++E + + + + ++ + L +L + YLH+
Sbjct: 104 VVDMYSSYLVG-DELWVVMEFLEGGALTDIVTHTR-MNEEQIATVCLSVLRALSYLHNQG 161
Query: 138 VLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGAKKYST 197
V+HRD+K+ ++LL + G +K+ DFG Q + LV T ++ APE ++ Y T
Sbjct: 162 VIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPE-VISRLPYGT 220
Query: 198 AVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPG-AKANFA 256
VD+WS+G ++ E++ +P + + + +I +L + + S L G
Sbjct: 221 EVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDSLPPRVKDLHKVSSVLRGFLDLMLV 280
Query: 257 KQPYNLLRKRFPAASFTGSPVLSESG 282
++P +R A G P L +G
Sbjct: 281 REP----SQRATAQELLGHPFLKLAG 302
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 140/317 (44%), Gaps = 66/317 (20%)
Query: 5 QGCRSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSL 64
Q + +F+++ + G++G V + K+SG A+K + K +E+ +L
Sbjct: 56 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEH-----TL 110
Query: 65 REINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLML 124
E IL + + P +V + E D+ ++YMVMEY+ + FS +
Sbjct: 111 NEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 169
Query: 125 QLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYT-SLVVTLWY 183
Q++ +YLH +++RDLK NLL++ QG +++ DFG +++ +K T +L T Y
Sbjct: 170 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR----VKGATWTLCGTPEY 225
Query: 184 RAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWP 243
APE++L +K Y+ AVD W++G ++ E+ A P F
Sbjct: 226 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF------------------------- 259
Query: 244 GLSELPGAKANFAKQPYNLLRK------RFPAASFTGSPVLSESGFDLLNRLLTYDPEKR 297
FA QP + K RFP+ S DLL LL D KR
Sbjct: 260 -----------FADQPIQIYEKIVSGKVRFPSH-------FSSDLKDLLRNLLQVDLTKR 301
Query: 298 I-----TVDDALNHYWF 309
V+D NH WF
Sbjct: 302 FGNLKNGVNDIKNHKWF 318
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 129/265 (48%), Gaps = 50/265 (18%)
Query: 66 EINILLSF-DHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPF-STSEVKCLM 123
EI ILL + HP+I+ +K+V DD VY+V E M + L + ++Q F S E ++
Sbjct: 70 EIEILLRYGQHPNIITLKDV-YDDGKHVYLVTELMRGG-ELLDKILRQKFFSEREASFVL 127
Query: 124 LQLLEGVKYLHDNWVLHRDLKTSNLLL----NNQGVLKICDFGMSRQYGSPLKPYTSLVV 179
+ + V+YLH V+HRDLK SN+L N L+ICDFG ++Q L+ L++
Sbjct: 128 HTIGKTVEYLHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQ----LRAENGLLM 183
Query: 180 TLWYRA----PELLLGAKKYSTAVDMWSVGCIMAELLAK-KPLFSGTTEVDQIDKIFKTL 234
T Y A PE+L + Y D+WS+G ++ +LA P +G + D ++I +
Sbjct: 184 TPCYTANFVAPEVL-KRQGYDEGCDIWSLGILLYTMLAGYTPFANGPS--DTPEEILTRI 240
Query: 235 GTPTETIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDP 294
G+ G L G N +SE+ DL++++L DP
Sbjct: 241 GS-------GKFTLSGGNWN----------------------TVSETAKDLVSKMLHVDP 271
Query: 295 EKRITVDDALNHYWF-HEVPLPKSK 318
+R+T L H W + LP+S+
Sbjct: 272 HQRLTAKQVLQHPWVTQKDKLPQSQ 296
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 94.4 bits (233), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 116/201 (57%), Gaps = 15/201 (7%)
Query: 22 GTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNV 81
G +G VY+A++K++ + A K + + +E+ +Y + EI+IL S DHP+IV +
Sbjct: 21 GDFGKVYKAQNKETSVLAAAKVI--DTKSEEELEDY------MVEIDILASCDHPNIVKL 72
Query: 82 KEVVMDDHDSVYMVMEYMEHD-LKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLH 140
+ +++ +++++E+ + +M +++P + S+++ + Q L+ + YLHDN ++H
Sbjct: 73 LDAFYYENN-LWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIH 131
Query: 141 RDLKTSNLLLNNQGVLKICDFGMS-RQYGSPLKPYTSLVVTLWYRAPELLLGA----KKY 195
RDLK N+L G +K+ DFG+S + + ++ S + T ++ APE+++ + Y
Sbjct: 132 RDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMCETSKDRPY 191
Query: 196 STAVDMWSVGCIMAELLAKKP 216
D+WS+G + E+ +P
Sbjct: 192 DYKADVWSLGITLIEMAEIEP 212
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 94.4 bits (233), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 129/265 (48%), Gaps = 50/265 (18%)
Query: 66 EINILLSF-DHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPF-STSEVKCLM 123
EI ILL + HP+I+ +K+V DD VY+V E M + L + ++Q F S E ++
Sbjct: 70 EIEILLRYGQHPNIITLKDV-YDDGKHVYLVTELMRGG-ELLDKILRQKFFSEREASFVL 127
Query: 124 LQLLEGVKYLHDNWVLHRDLKTSNLLL----NNQGVLKICDFGMSRQYGSPLKPYTSLVV 179
+ + V+YLH V+HRDLK SN+L N L+ICDFG ++Q L+ L++
Sbjct: 128 HTIGKTVEYLHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQ----LRAENGLLM 183
Query: 180 TLWYRA----PELLLGAKKYSTAVDMWSVGCIMAELLAK-KPLFSGTTEVDQIDKIFKTL 234
T Y A PE+L + Y D+WS+G ++ +LA P +G + D ++I +
Sbjct: 184 TPCYTANFVAPEVL-KRQGYDEGCDIWSLGILLYTMLAGYTPFANGPS--DTPEEILTRI 240
Query: 235 GTPTETIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDP 294
G+ G L G N +SE+ DL++++L DP
Sbjct: 241 GS-------GKFTLSGGNWN----------------------TVSETAKDLVSKMLHVDP 271
Query: 295 EKRITVDDALNHYWF-HEVPLPKSK 318
+R+T L H W + LP+S+
Sbjct: 272 HQRLTAKQVLQHPWVTQKDKLPQSQ 296
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 94.4 bits (233), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 142/302 (47%), Gaps = 53/302 (17%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILL 71
++ + KI +G G VY A D +G+ VA++++ + K++ + + EI ++
Sbjct: 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELI--------INEILVMR 72
Query: 72 SFDHPSIVNVKEVVMDDH---DSVYMVMEYMEHDLKWLMESMKQP-FSTSEVKCLMLQLL 127
+P+IVN +D + D +++VMEY+ L + + + ++ + + L
Sbjct: 73 ENKNPNIVNY----LDSYLVGDELWVVMEYLAGG--SLTDVVTETCMDEGQIAAVCRECL 126
Query: 128 EGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPE 187
+ +++LH N V+HRD+K+ N+LL G +K+ DFG Q +++V T ++ APE
Sbjct: 127 QALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPE 186
Query: 188 LLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSE 247
++ K Y VD+WS+G + E++ +P + + + + T GTP E
Sbjct: 187 VVT-RKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRAL-YLIATNGTP---------E 235
Query: 248 LPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHY 307
L + P L +A F D LNR L D EKR + + L H
Sbjct: 236 L--------QNPEKL------SAIFR----------DFLNRCLDMDVEKRGSAKELLQHQ 271
Query: 308 WF 309
+
Sbjct: 272 FL 273
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 139/317 (43%), Gaps = 66/317 (20%)
Query: 5 QGCRSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSL 64
Q + +FE++ + G++G V + K++G A+K + K +E+ +L
Sbjct: 36 QNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEH-----TL 90
Query: 65 REINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLML 124
E IL + + P +V + E D+ ++YMVMEY+ + FS +
Sbjct: 91 NEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 149
Query: 125 QLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYT-SLVVTLWY 183
Q++ +YLH +++RDLK NLL++ QG +++ DFG +++ +K T L T Y
Sbjct: 150 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR----VKGRTWXLCGTPEY 205
Query: 184 RAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWP 243
APE++L +K Y+ AVD W++G ++ E+ A P F
Sbjct: 206 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF------------------------- 239
Query: 244 GLSELPGAKANFAKQPYNLLRK------RFPAASFTGSPVLSESGFDLLNRLLTYDPEKR 297
FA QP + K RFP+ S DLL LL D KR
Sbjct: 240 -----------FADQPIQIYEKIVSGKVRFPSH-------FSSDLKDLLRNLLQVDLTKR 281
Query: 298 I-----TVDDALNHYWF 309
V+D NH WF
Sbjct: 282 FGNLKNGVNDIXNHKWF 298
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 89/320 (27%), Positives = 139/320 (43%), Gaps = 66/320 (20%)
Query: 2 NMLQGCRSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPI 61
N Q + +FE++ I G++G V + ++G A+K + K +E+
Sbjct: 32 NPAQNTAHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEH---- 87
Query: 62 SSLREINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKC 121
+L E IL + + P +V + E D+ ++YMVMEY+ + FS +
Sbjct: 88 -TLNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF 145
Query: 122 LMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYT-SLVVT 180
Q++ +YLH +++RDLK NLL++ QG +K+ DFG +++ +K T L T
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKR----VKGRTWXLCGT 201
Query: 181 LWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTET 240
Y APE++L +K Y+ AVD W++G ++ E+ A P F
Sbjct: 202 PEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF---------------------- 238
Query: 241 IWPGLSELPGAKANFAKQPYNLLRK------RFPAASFTGSPVLSESGFDLLNRLLTYDP 294
FA QP + K RFP+ S DLL LL D
Sbjct: 239 --------------FADQPIQIYEKIVSGKVRFPSH-------FSSDLKDLLRNLLQVDL 277
Query: 295 EKRI-----TVDDALNHYWF 309
KR V+D NH WF
Sbjct: 278 TKRFGNLKNGVNDIKNHKWF 297
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 139/317 (43%), Gaps = 66/317 (20%)
Query: 5 QGCRSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSL 64
Q + +F+++ + G++G V + K+SG A+K + K +E+ +L
Sbjct: 35 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEH-----TL 89
Query: 65 REINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLML 124
E IL + + P +V + E D+ ++YMVMEY+ + FS +
Sbjct: 90 NEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 125 QLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYT-SLVVTLWY 183
Q++ +YLH +++RDLK NLL++ QG +++ DFG +++ +K T L T Y
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR----VKGRTWXLAGTPEY 204
Query: 184 RAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWP 243
APE++L +K Y+ AVD W++G ++ E+ A P F
Sbjct: 205 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF------------------------- 238
Query: 244 GLSELPGAKANFAKQPYNLLRK------RFPAASFTGSPVLSESGFDLLNRLLTYDPEKR 297
FA QP + K RFP+ S DLL LL D KR
Sbjct: 239 -----------FADQPIQIYEKIVSGKVRFPSH-------FSSDLKDLLRNLLQVDLTKR 280
Query: 298 I-----TVDDALNHYWF 309
V+D NH WF
Sbjct: 281 FGNLKNGVNDIKNHKWF 297
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 114/223 (51%), Gaps = 19/223 (8%)
Query: 6 GCRSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVK----MNVGRKEDCLEYGFPI 61
G ++ F KI G + VYRA G VALKKV+ M+ + DC+
Sbjct: 27 GYNTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCI------ 80
Query: 62 SSLREINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEH-DLKWLMESMKQP---FSTS 117
+EI++L +HP+++ ++D++ + +V+E + DL +++ K+
Sbjct: 81 ---KEIDLLKQLNHPNVIKYYASFIEDNE-LNIVLELADAGDLSRMIKHFKKQKRLIPER 136
Query: 118 EVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSL 177
V +QL ++++H V+HRD+K +N+ + GV+K+ D G+ R + S SL
Sbjct: 137 TVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSL 196
Query: 178 VVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSG 220
V T +Y +PE + Y+ D+WS+GC++ E+ A + F G
Sbjct: 197 VGTPYYMSPE-RIHENGYNFKSDIWSLGCLLYEMAALQSPFYG 238
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 94.0 bits (232), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 88/320 (27%), Positives = 140/320 (43%), Gaps = 66/320 (20%)
Query: 2 NMLQGCRSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPI 61
N Q + +FE++ + G++G V + K++G A+K + K +E+
Sbjct: 32 NPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEH---- 87
Query: 62 SSLREINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKC 121
+L E IL + + P +V + E D+ ++YMVMEY+ + FS +
Sbjct: 88 -TLNEKRILQAVNFPFLVKL-EYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF 145
Query: 122 LMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYT-SLVVT 180
Q++ +YLH +++RDLK NLL++ QG +++ DFG +++ +K T L T
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR----VKGRTWXLCGT 201
Query: 181 LWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTET 240
Y APE++L +K Y+ AVD W++G ++ E+ A P F
Sbjct: 202 PEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF---------------------- 238
Query: 241 IWPGLSELPGAKANFAKQPYNLLRK------RFPAASFTGSPVLSESGFDLLNRLLTYDP 294
FA QP + K RFP+ S DLL LL D
Sbjct: 239 --------------FADQPIQIYEKIVSGKVRFPSH-------FSSDLKDLLRNLLQVDL 277
Query: 295 EKRI-----TVDDALNHYWF 309
KR V+D NH WF
Sbjct: 278 TKRFGNLKNGVNDIKNHKWF 297
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 94.0 bits (232), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 137/298 (45%), Gaps = 48/298 (16%)
Query: 18 KISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSL-REINILLSFDHP 76
++ G + +V + R+K +G A K +K R+ G + RE++IL HP
Sbjct: 18 ELGSGVFAVVKKCREKSTGLQYAAKFIKK---RRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 77 SIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDN 136
+++ + EV + D V +++E + + + K+ + E + Q+L GV YLH
Sbjct: 75 NVITLHEVYENKTD-VILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSL 133
Query: 137 WVLHRDLKTSNLLLNNQGV----LKICDFGMSRQ--YGSPLKPYTSLVVTLWYRAPELLL 190
+ H DLK N++L ++ V +KI DFG++ + +G+ K ++ T + APE ++
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEFVAPE-IV 189
Query: 191 GAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPG 250
+ DMWS+G I LL+ F G T+ + +
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL----------------------- 226
Query: 251 AKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYW 308
AN + Y F F+ + L++ D + RLL DP+KR+T+ D+L H W
Sbjct: 227 --ANVSAVNY-----EFEDEYFSNTSALAK---DFIRRLLVKDPKKRMTIQDSLQHPW 274
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 137/298 (45%), Gaps = 48/298 (16%)
Query: 18 KISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSL-REINILLSFDHP 76
++ G + +V + R+K +G A K +K R+ G + RE++IL HP
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKFIKK---RRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 77 SIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDN 136
+++ + EV + D V +++E + + + K+ + E + Q+L GV YLH
Sbjct: 75 NVITLHEVYENKTD-VILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSL 133
Query: 137 WVLHRDLKTSNLLLNNQGV----LKICDFGMSRQ--YGSPLKPYTSLVVTLWYRAPELLL 190
+ H DLK N++L ++ V +KI DFG++ + +G+ K ++ T + APE ++
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEFVAPE-IV 189
Query: 191 GAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPG 250
+ DMWS+G I LL+ F G T+ + +
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL----------------------- 226
Query: 251 AKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYW 308
AN + Y F F+ + L++ D + RLL DP+KR+T+ D+L H W
Sbjct: 227 --ANVSAVNY-----EFEDEYFSNTSALAK---DFIRRLLVKDPKKRMTIQDSLQHPW 274
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 137/298 (45%), Gaps = 48/298 (16%)
Query: 18 KISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSL-REINILLSFDHP 76
++ G + +V + R+K +G A K +K R+ G + RE++IL HP
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKFIKK---RRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 77 SIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDN 136
+++ + EV + D V +++E + + + K+ + E + Q+L GV YLH
Sbjct: 75 NVITLHEVYENKTD-VILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSL 133
Query: 137 WVLHRDLKTSNLLLNNQGV----LKICDFGMSRQ--YGSPLKPYTSLVVTLWYRAPELLL 190
+ H DLK N++L ++ V +KI DFG++ + +G+ K ++ T + APE ++
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEFVAPE-IV 189
Query: 191 GAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPG 250
+ DMWS+G I LL+ F G T+ + +
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL----------------------- 226
Query: 251 AKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYW 308
AN + Y F F+ + L++ D + RLL DP+KR+T+ D+L H W
Sbjct: 227 --ANVSAVNY-----EFEDEYFSNTSALAK---DFIRRLLVKDPKKRMTIQDSLQHPW 274
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 137/298 (45%), Gaps = 48/298 (16%)
Query: 18 KISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSL-REINILLSFDHP 76
++ G + +V + R+K +G A K +K R+ G + RE++IL HP
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKFIKK---RRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 77 SIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDN 136
+++ + EV + D V +++E + + + K+ + E + Q+L GV YLH
Sbjct: 75 NVITLHEVYENKTD-VILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSL 133
Query: 137 WVLHRDLKTSNLLLNNQGV----LKICDFGMSRQ--YGSPLKPYTSLVVTLWYRAPELLL 190
+ H DLK N++L ++ V +KI DFG++ + +G+ K ++ T + APE ++
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEFVAPE-IV 189
Query: 191 GAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPG 250
+ DMWS+G I LL+ F G T+ + +
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL----------------------- 226
Query: 251 AKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYW 308
AN + Y F F+ + L++ D + RLL DP+KR+T+ D+L H W
Sbjct: 227 --ANVSAVNY-----EFEDEYFSNTSALAK---DFIRRLLVKDPKKRMTIQDSLQHPW 274
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 137/298 (45%), Gaps = 48/298 (16%)
Query: 18 KISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSL-REINILLSFDHP 76
++ G + +V + R+K +G A K +K R+ G + RE++IL HP
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKFIKK---RRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 77 SIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDN 136
+++ + EV + D V +++E + + + K+ + E + Q+L GV YLH
Sbjct: 75 NVITLHEVYENKTD-VILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSL 133
Query: 137 WVLHRDLKTSNLLLNNQGV----LKICDFGMSRQ--YGSPLKPYTSLVVTLWYRAPELLL 190
+ H DLK N++L ++ V +KI DFG++ + +G+ K ++ T + APE ++
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEFVAPE-IV 189
Query: 191 GAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPG 250
+ DMWS+G I LL+ F G T+ + +
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL----------------------- 226
Query: 251 AKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYW 308
AN + Y F F+ + L++ D + RLL DP+KR+T+ D+L H W
Sbjct: 227 --ANVSAVNY-----EFEDEYFSNTSALAK---DFIRRLLVKDPKKRMTIQDSLQHPW 274
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 137/298 (45%), Gaps = 48/298 (16%)
Query: 18 KISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSL-REINILLSFDHP 76
++ G + +V + R+K +G A K +K R+ G + RE++IL HP
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKFIKK---RRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 77 SIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDN 136
+++ + EV + D V +++E + + + K+ + E + Q+L GV YLH
Sbjct: 75 NVITLHEVYENKTD-VILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSL 133
Query: 137 WVLHRDLKTSNLLLNNQGV----LKICDFGMSRQ--YGSPLKPYTSLVVTLWYRAPELLL 190
+ H DLK N++L ++ V +KI DFG++ + +G+ K ++ T + APE ++
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEFVAPE-IV 189
Query: 191 GAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPG 250
+ DMWS+G I LL+ F G T+ + +
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL----------------------- 226
Query: 251 AKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYW 308
AN + Y F F+ + L++ D + RLL DP+KR+T+ D+L H W
Sbjct: 227 --ANVSAVNY-----EFEDEYFSNTSALAK---DFIRRLLVKDPKKRMTIQDSLQHPW 274
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 137/298 (45%), Gaps = 48/298 (16%)
Query: 18 KISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSL-REINILLSFDHP 76
++ G + +V + R+K +G A K +K R+ G + RE++IL HP
Sbjct: 17 ELGSGQFAVVKKCREKSTGLQYAAKFIKK---RRTKSSRRGVSREDIEREVSILKEIQHP 73
Query: 77 SIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDN 136
+++ + EV + D V +++E + + + K+ + E + Q+L GV YLH
Sbjct: 74 NVITLHEVYENKTD-VILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSL 132
Query: 137 WVLHRDLKTSNLLLNNQGV----LKICDFGMSRQ--YGSPLKPYTSLVVTLWYRAPELLL 190
+ H DLK N++L ++ V +KI DFG++ + +G+ K ++ T + APE ++
Sbjct: 133 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEFVAPE-IV 188
Query: 191 GAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPG 250
+ DMWS+G I LL+ F G T+ + +
Sbjct: 189 NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL----------------------- 225
Query: 251 AKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYW 308
AN + Y F F+ + L++ D + RLL DP+KR+T+ D+L H W
Sbjct: 226 --ANVSAVNY-----EFEDEYFSNTSALAK---DFIRRLLVKDPKKRMTIQDSLQHPW 273
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/320 (27%), Positives = 140/320 (43%), Gaps = 66/320 (20%)
Query: 2 NMLQGCRSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPI 61
N Q + +FE++ + G++G V + K++G A+K + K +E+
Sbjct: 32 NPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEH---- 87
Query: 62 SSLREINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKC 121
+L E IL + + P +V + E D+ ++YMVMEY+ + FS +
Sbjct: 88 -TLNEKRILQAVNFPFLVKL-EYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF 145
Query: 122 LMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYT-SLVVT 180
Q++ +YLH +++RDLK NLL++ QG +++ DFG +++ +K T L T
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR----VKGRTWXLCGT 201
Query: 181 LWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTET 240
Y APE++L +K Y+ AVD W++G ++ E+ A P F
Sbjct: 202 PEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF---------------------- 238
Query: 241 IWPGLSELPGAKANFAKQPYNLLRK------RFPAASFTGSPVLSESGFDLLNRLLTYDP 294
FA QP + K RFP+ S DLL LL D
Sbjct: 239 --------------FADQPIQIYEKIVSGKVRFPSH-------FSSDLKDLLRNLLQVDL 277
Query: 295 EKRI-----TVDDALNHYWF 309
KR V+D NH WF
Sbjct: 278 TKRFGNLKDGVNDIKNHKWF 297
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 139/317 (43%), Gaps = 66/317 (20%)
Query: 5 QGCRSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSL 64
Q + +F+++ + G++G V + K+SG A+K + K +E+ +L
Sbjct: 35 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEH-----TL 89
Query: 65 REINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLML 124
E IL + + P +V + E D+ ++YMVMEY+ + FS +
Sbjct: 90 NEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 125 QLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYT-SLVVTLWY 183
Q++ +YLH +++RDLK NLL++ QG +++ DFG +++ +K T L T Y
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR----VKGRTWXLCGTPEY 204
Query: 184 RAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWP 243
APE++L +K Y+ AVD W++G ++ E+ A P F
Sbjct: 205 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF------------------------- 238
Query: 244 GLSELPGAKANFAKQPYNLLRK------RFPAASFTGSPVLSESGFDLLNRLLTYDPEKR 297
FA QP + K RFP+ S DLL LL D KR
Sbjct: 239 -----------FADQPIQIYEKIVSGKVRFPSH-------FSSDLKDLLRNLLQVDLTKR 280
Query: 298 I-----TVDDALNHYWF 309
V+D NH WF
Sbjct: 281 FGNLPNGVNDIKNHKWF 297
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 137/298 (45%), Gaps = 48/298 (16%)
Query: 18 KISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSL-REINILLSFDHP 76
++ G + +V + R+K +G A K +K R+ G + RE++IL HP
Sbjct: 17 ELGSGQFAVVKKCREKSTGLQYAAKFIKK---RRTKSSRRGVSREDIEREVSILKEIQHP 73
Query: 77 SIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDN 136
+++ + EV + D V +++E + + + K+ + E + Q+L GV YLH
Sbjct: 74 NVITLHEVYENKTD-VILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSL 132
Query: 137 WVLHRDLKTSNLLLNNQGV----LKICDFGMSRQ--YGSPLKPYTSLVVTLWYRAPELLL 190
+ H DLK N++L ++ V +KI DFG++ + +G+ K ++ T + APE ++
Sbjct: 133 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEFVAPE-IV 188
Query: 191 GAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPG 250
+ DMWS+G I LL+ F G T+ + +
Sbjct: 189 NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL----------------------- 225
Query: 251 AKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYW 308
AN + Y F F+ + L++ D + RLL DP+KR+T+ D+L H W
Sbjct: 226 --ANVSAVNY-----EFEDEYFSNTSALAK---DFIRRLLVKDPKKRMTIQDSLQHPW 273
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 137/298 (45%), Gaps = 48/298 (16%)
Query: 18 KISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSL-REINILLSFDHP 76
++ G + +V + R+K +G A K +K R+ G + RE++IL HP
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKFIKK---RRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 77 SIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDN 136
+++ + EV + D V +++E + + + K+ + E + Q+L GV YLH
Sbjct: 75 NVITLHEVYENKTD-VILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSL 133
Query: 137 WVLHRDLKTSNLLLNNQGV----LKICDFGMSRQ--YGSPLKPYTSLVVTLWYRAPELLL 190
+ H DLK N++L ++ V +KI DFG++ + +G+ K ++ T + APE ++
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEFVAPE-IV 189
Query: 191 GAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPG 250
+ DMWS+G I LL+ F G T+ + +
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL----------------------- 226
Query: 251 AKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYW 308
AN + Y F F+ + L++ D + RLL DP+KR+T+ D+L H W
Sbjct: 227 --ANVSAVNY-----EFEDEYFSNTSALAK---DFIRRLLVKDPKKRMTIQDSLQHPW 274
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/320 (27%), Positives = 140/320 (43%), Gaps = 66/320 (20%)
Query: 2 NMLQGCRSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPI 61
N Q + +FE++ + G++G V + K++G A+K + K +E+
Sbjct: 32 NPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEH---- 87
Query: 62 SSLREINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKC 121
+L E IL + + P +V + E D+ ++YMVMEY+ + FS +
Sbjct: 88 -TLNEKRILQAVNFPFLVKL-EYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF 145
Query: 122 LMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYT-SLVVT 180
Q++ +YLH +++RDLK NLL++ QG +++ DFG +++ +K T L T
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR----VKGRTWXLCGT 201
Query: 181 LWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTET 240
Y APE++L +K Y+ AVD W++G ++ E+ A P F
Sbjct: 202 PEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF---------------------- 238
Query: 241 IWPGLSELPGAKANFAKQPYNLLRK------RFPAASFTGSPVLSESGFDLLNRLLTYDP 294
FA QP + K RFP+ S DLL LL D
Sbjct: 239 --------------FADQPIQIYEKIVSGKVRFPSH-------FSSDLKDLLRNLLQVDL 277
Query: 295 EKRI-----TVDDALNHYWF 309
KR V+D NH WF
Sbjct: 278 TKRFGNLKDGVNDIKNHKWF 297
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 137/298 (45%), Gaps = 48/298 (16%)
Query: 18 KISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSL-REINILLSFDHP 76
++ G + +V + R+K +G A K +K R+ G + RE++IL HP
Sbjct: 18 ELGSGKFAVVKKCREKSTGLQYAAKFIKK---RRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 77 SIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDN 136
+++ + EV + D V +++E + + + K+ + E + Q+L GV YLH
Sbjct: 75 NVITLHEVYENKTD-VILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSL 133
Query: 137 WVLHRDLKTSNLLLNNQGV----LKICDFGMSRQ--YGSPLKPYTSLVVTLWYRAPELLL 190
+ H DLK N++L ++ V +KI DFG++ + +G+ K ++ T + APE ++
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEFVAPE-IV 189
Query: 191 GAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPG 250
+ DMWS+G I LL+ F G T+ + +
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL----------------------- 226
Query: 251 AKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYW 308
AN + Y F F+ + L++ D + RLL DP+KR+T+ D+L H W
Sbjct: 227 --ANVSAVNY-----EFEDEYFSNTSALAK---DFIRRLLVKDPKKRMTIQDSLQHPW 274
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/327 (25%), Positives = 139/327 (42%), Gaps = 51/327 (15%)
Query: 8 RSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREI 67
R F F + + G + V+ + + +G++ ALK +K + ++ LE EI
Sbjct: 8 RKTFIF--MEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLE--------NEI 57
Query: 68 NILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLL 127
+L H +IV ++++ + Y+VM+ + + + ++ + ++ Q+L
Sbjct: 58 AVLKKIKHENIVTLEDI-YESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVL 116
Query: 128 EGVKYLHDNWVLHRDLKTSNLLL---NNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYR 184
VKYLH+N ++HRDLK NLL + I DFG+S+ + + ++ T Y
Sbjct: 117 SAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGI--MSTACGTPGYV 174
Query: 185 APELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPG 244
APE +L K YS AVD WS+G I LL P F TE +KI + W
Sbjct: 175 APE-VLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDD 233
Query: 245 LSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDAL 304
+SES D + LL DP +R T + AL
Sbjct: 234 ---------------------------------ISESAKDFICHLLEKDPNERYTCEKAL 260
Query: 305 NHYWFHEVPLPKSKDFMPTFPPQHARN 331
+H W + +D P+ Q +N
Sbjct: 261 SHPWI-DGNTALHRDIYPSVSLQIQKN 286
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/316 (26%), Positives = 146/316 (46%), Gaps = 54/316 (17%)
Query: 18 KISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINIL-LSFDHP 76
++ G + +V + K +G+ A K +K R +DC L EI +L L+ P
Sbjct: 36 ELGRGKFAVVRQCISKSTGQEYAAKFLKKR-RRGQDC-----RAEILHEIAVLELAKSCP 89
Query: 77 SIVNVKEVVMDDHDSVYMVMEYMEHD--LKWLMESMKQPFSTSEVKCLMLQLLEGVKYLH 134
++N+ EV ++ + +++EY + + + S ++V L+ Q+LEGV YLH
Sbjct: 90 RVINLHEV-YENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLH 148
Query: 135 DNWVLHRDLKTSNLLLNN---QGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLG 191
N ++H DLK N+LL++ G +KI DFGMSR+ G + ++ T Y APE +L
Sbjct: 149 QNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACE-LREIMGTPEYLAPE-ILN 206
Query: 192 AKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGA 251
+TA DMW++G I LL F +G + + +S++
Sbjct: 207 YDPITTATDMWNIGIIAYMLLTHTSPF---------------VGEDNQETYLNISQV--- 248
Query: 252 KANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHE 311
+++++ ++ +S+ D + LL +PEKR T + L+H W +
Sbjct: 249 NVDYSEETFS---------------SVSQLATDFIQSLLVKNPEKRPTAEICLSHSWLQQ 293
Query: 312 VPLPKSKDFMPTFPPQ 327
DF F P+
Sbjct: 294 W------DFENLFHPE 303
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 139/317 (43%), Gaps = 66/317 (20%)
Query: 5 QGCRSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSL 64
Q + +FE++ + G++G V + K++G A+K + K +E+ +L
Sbjct: 56 QNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEH-----TL 110
Query: 65 REINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLML 124
E IL + + P +V + E D+ ++YMVMEY+ + FS +
Sbjct: 111 NEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 169
Query: 125 QLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYT-SLVVTLWY 183
Q++ +YLH +++RDLK NLL++ QG +++ DFG +++ +K T L T Y
Sbjct: 170 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR----VKGRTWXLCGTPEY 225
Query: 184 RAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWP 243
APE++L +K Y+ AVD W++G ++ E+ A P F
Sbjct: 226 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF------------------------- 259
Query: 244 GLSELPGAKANFAKQPYNLLRK------RFPAASFTGSPVLSESGFDLLNRLLTYDPEKR 297
FA QP + K RFP+ S DLL LL D KR
Sbjct: 260 -----------FADQPIQIYEKIVSGKVRFPSH-------FSSDLKDLLRNLLQVDLTKR 301
Query: 298 I-----TVDDALNHYWF 309
V+D NH WF
Sbjct: 302 FGNLKNGVNDIKNHKWF 318
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 137/298 (45%), Gaps = 48/298 (16%)
Query: 18 KISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSL-REINILLSFDHP 76
++ G + +V + R+K +G A K +K R+ G + RE++IL HP
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKFIK---KRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 77 SIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDN 136
+++ + EV + D V +++E + + + K+ + E + Q+L GV YLH
Sbjct: 75 NVITLHEVYENKTD-VILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSL 133
Query: 137 WVLHRDLKTSNLLLNNQGV----LKICDFGMSRQ--YGSPLKPYTSLVVTLWYRAPELLL 190
+ H DLK N++L ++ V +KI DFG++ + +G+ K ++ T + APE ++
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPAFVAPE-IV 189
Query: 191 GAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPG 250
+ DMWS+G I LL+ F G T+ + +
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL----------------------- 226
Query: 251 AKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYW 308
AN + Y F F+ + L++ D + RLL DP+KR+T+ D+L H W
Sbjct: 227 --ANVSAVNYE-----FEDEYFSNTSALAK---DFIRRLLVKDPKKRMTIQDSLQHPW 274
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 137/298 (45%), Gaps = 48/298 (16%)
Query: 18 KISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSL-REINILLSFDHP 76
++ G + +V + R+K +G A K +K R+ G + RE++IL HP
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKFIKK---RRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 77 SIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDN 136
+++ + EV + D V +++E + + + K+ + E + Q+L GV YLH
Sbjct: 75 NVITLHEVYENKTD-VILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSL 133
Query: 137 WVLHRDLKTSNLLLNNQGV----LKICDFGMSRQ--YGSPLKPYTSLVVTLWYRAPELLL 190
+ H DLK N++L ++ V +KI DFG++ + +G+ K ++ T + APE ++
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEFVAPE-IV 189
Query: 191 GAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPG 250
+ DMWS+G I LL+ F G T+ + +
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL----------------------- 226
Query: 251 AKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYW 308
AN + Y F F+ + L++ D + RLL DP+KR+T+ D+L H W
Sbjct: 227 --ANVSAVNY-----EFEDEYFSNTSALAK---DFIRRLLVKDPKKRMTIQDSLQHPW 274
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 139/317 (43%), Gaps = 66/317 (20%)
Query: 5 QGCRSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSL 64
Q + +F+++ + G++G V + K+SG A+K + K +E+ +L
Sbjct: 35 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEH-----TL 89
Query: 65 REINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLML 124
E IL + + P +V + E D+ ++YMVMEY+ + FS +
Sbjct: 90 NEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 125 QLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYT-SLVVTLWY 183
Q++ +YLH +++RDLK NLL++ QG +++ DFG +++ +K T L T Y
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR----VKGRTWXLXGTPEY 204
Query: 184 RAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWP 243
APE++L +K Y+ AVD W++G ++ E+ A P F
Sbjct: 205 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF------------------------- 238
Query: 244 GLSELPGAKANFAKQPYNLLRK------RFPAASFTGSPVLSESGFDLLNRLLTYDPEKR 297
FA QP + K RFP+ S DLL LL D KR
Sbjct: 239 -----------FADQPIQIYEKIVSGKVRFPSH-------FSSDLKDLLRNLLQVDLTKR 280
Query: 298 I-----TVDDALNHYWF 309
V+D NH WF
Sbjct: 281 FGNLKNGVNDIKNHKWF 297
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 141/302 (46%), Gaps = 53/302 (17%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILL 71
++ + KI +G G VY A D +G+ VA++++ + K++ + + EI ++
Sbjct: 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELI--------INEILVMR 72
Query: 72 SFDHPSIVNVKEVVMDDH---DSVYMVMEYMEHDLKWLMESMKQP-FSTSEVKCLMLQLL 127
+P+IVN +D + D +++VMEY+ L + + + ++ + + L
Sbjct: 73 ENKNPNIVNY----LDSYLVGDELWVVMEYLAGG--SLTDVVTETCMDEGQIAAVCRECL 126
Query: 128 EGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPE 187
+ +++LH N V+HRD+K+ N+LL G +K+ DFG Q + +V T ++ APE
Sbjct: 127 QALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAPE 186
Query: 188 LLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSE 247
++ K Y VD+WS+G + E++ +P + + + + T GTP E
Sbjct: 187 VVT-RKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRAL-YLIATNGTP---------E 235
Query: 248 LPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHY 307
L + P L +A F D LNR L D EKR + + L H
Sbjct: 236 L--------QNPEKL------SAIFR----------DFLNRCLDMDVEKRGSAKELLQHQ 271
Query: 308 WF 309
+
Sbjct: 272 FL 273
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 139/300 (46%), Gaps = 45/300 (15%)
Query: 18 KISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPS 77
KI EG+ GIV A + SG++VA+KK+ + ++ + L E+ I+ + H +
Sbjct: 158 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELL--------FNEVVIMRDYQHEN 209
Query: 78 IVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNW 137
+V + + D +++VME++E + + + + ++ + L +L+ + LH
Sbjct: 210 VVEMYNSYLVG-DELWVVMEFLEGGALTDIVTHTR-MNEEQIAAVCLAVLQALSVLHAQG 267
Query: 138 VLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGAKKYST 197
V+HRD+K+ ++LL + G +K+ DFG Q + LV T ++ APEL+ Y
Sbjct: 268 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELI-SRLPYGP 326
Query: 198 AVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGAKANFAK 257
VD+WS+G ++ E++ +P + P L + + N
Sbjct: 327 EVDIWSLGIMVIEMVDGEPPYFNE---------------------PPLKAMKMIRDNLPP 365
Query: 258 QPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVPLPKS 317
+ NL + SP L GF L+RLL DP +R T + L H + + P S
Sbjct: 366 RLKNLHKV---------SPSLK--GF--LDRLLVRDPAQRATAAELLKHPFLAKAGPPAS 412
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 139/317 (43%), Gaps = 66/317 (20%)
Query: 5 QGCRSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSL 64
Q + +F+++ + G++G V + K+SG A+K + K +E+ +L
Sbjct: 35 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEH-----TL 89
Query: 65 REINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLML 124
E IL + + P +V + E D+ ++YMVMEY+ + FS +
Sbjct: 90 NEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 125 QLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYT-SLVVTLWY 183
Q++ +YLH +++RDLK NLL++ QG +++ DFG +++ +K T L T Y
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR----VKGRTWXLCGTPEY 204
Query: 184 RAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWP 243
APE++L +K Y+ AVD W++G ++ E+ A P F
Sbjct: 205 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF------------------------- 238
Query: 244 GLSELPGAKANFAKQPYNLLRK------RFPAASFTGSPVLSESGFDLLNRLLTYDPEKR 297
FA QP + K RFP+ S DLL LL D KR
Sbjct: 239 -----------FADQPIQIYEKIVSGKVRFPSH-------FSSDLKDLLRNLLQVDLTKR 280
Query: 298 I-----TVDDALNHYWF 309
V+D NH WF
Sbjct: 281 FGNLKNGVNDIKNHKWF 297
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 139/317 (43%), Gaps = 66/317 (20%)
Query: 5 QGCRSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSL 64
Q + +F+++ + G++G V + K+SG A+K + K +E+ +L
Sbjct: 35 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEH-----TL 89
Query: 65 REINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLML 124
E IL + + P +V + E D+ ++YMVMEY+ + FS +
Sbjct: 90 NEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 125 QLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYT-SLVVTLWY 183
Q++ +YLH +++RDLK NLL++ QG +++ DFG +++ +K T L T Y
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR----VKGRTWXLCGTPEY 204
Query: 184 RAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWP 243
APE++L +K Y+ AVD W++G ++ E+ A P F
Sbjct: 205 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF------------------------- 238
Query: 244 GLSELPGAKANFAKQPYNLLRK------RFPAASFTGSPVLSESGFDLLNRLLTYDPEKR 297
FA QP + K RFP+ S DLL LL D KR
Sbjct: 239 -----------FADQPIQIYEKIVSGKVRFPSH-------FSSDLKDLLRNLLQVDLTKR 280
Query: 298 I-----TVDDALNHYWF 309
V+D NH WF
Sbjct: 281 FGNLKNGVNDIKNHKWF 297
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 141/302 (46%), Gaps = 53/302 (17%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILL 71
++ + KI +G G VY A D +G+ VA++++ + K++ + + EI ++
Sbjct: 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELI--------INEILVMR 72
Query: 72 SFDHPSIVNVKEVVMDDH---DSVYMVMEYMEHDLKWLMESMKQP-FSTSEVKCLMLQLL 127
+P+IVN +D + D +++VMEY+ L + + + ++ + + L
Sbjct: 73 ENKNPNIVNY----LDSYLVGDELWVVMEYLAGG--SLTDVVTETCMDEGQIAAVCRECL 126
Query: 128 EGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPE 187
+ +++LH N V+HRD+K+ N+LL G +K+ DFG Q + +V T ++ APE
Sbjct: 127 QALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPE 186
Query: 188 LLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSE 247
++ K Y VD+WS+G + E++ +P + + + + T GTP E
Sbjct: 187 VVT-RKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRAL-YLIATNGTP---------E 235
Query: 248 LPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHY 307
L + P L +A F D LNR L D EKR + + L H
Sbjct: 236 L--------QNPEKL------SAIFR----------DFLNRCLEMDVEKRGSAKELLQHQ 271
Query: 308 WF 309
+
Sbjct: 272 FL 273
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 139/317 (43%), Gaps = 66/317 (20%)
Query: 5 QGCRSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSL 64
Q + +F+++ + G++G V + K+SG A+K + K +E+ +L
Sbjct: 36 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEH-----TL 90
Query: 65 REINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLML 124
E IL + + P +V + E D+ ++YMVMEY+ + FS +
Sbjct: 91 NEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 149
Query: 125 QLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYT-SLVVTLWY 183
Q++ +YLH +++RDLK NLL++ QG +++ DFG +++ +K T L T Y
Sbjct: 150 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR----VKGRTWXLCGTPEY 205
Query: 184 RAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWP 243
APE++L +K Y+ AVD W++G ++ E+ A P F
Sbjct: 206 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF------------------------- 239
Query: 244 GLSELPGAKANFAKQPYNLLRK------RFPAASFTGSPVLSESGFDLLNRLLTYDPEKR 297
FA QP + K RFP+ S DLL LL D KR
Sbjct: 240 -----------FADQPIQIYEKIVSGKVRFPSH-------FSSDLKDLLRNLLQVDLTKR 281
Query: 298 I-----TVDDALNHYWF 309
V+D NH WF
Sbjct: 282 FGNLKNGVNDIKNHKWF 298
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 139/317 (43%), Gaps = 66/317 (20%)
Query: 5 QGCRSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSL 64
Q + +FE++ + G++G V + K++G A+K + K +E+ +L
Sbjct: 36 QNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEH-----TL 90
Query: 65 REINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLML 124
E IL + + P +V + E D+ ++YMVMEY+ + FS +
Sbjct: 91 NEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 149
Query: 125 QLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYT-SLVVTLWY 183
Q++ +YLH +++RDLK NLL++ QG +++ DFG +++ +K T L T Y
Sbjct: 150 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR----VKGRTWXLCGTPEY 205
Query: 184 RAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWP 243
APE++L +K Y+ AVD W++G ++ E+ A P F
Sbjct: 206 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF------------------------- 239
Query: 244 GLSELPGAKANFAKQPYNLLRK------RFPAASFTGSPVLSESGFDLLNRLLTYDPEKR 297
FA QP + K RFP+ S DLL LL D KR
Sbjct: 240 -----------FADQPIQIYEKIVSGKVRFPSH-------FSSDLKDLLRNLLQVDLTKR 281
Query: 298 I-----TVDDALNHYWF 309
V+D NH WF
Sbjct: 282 FGNLKNGVNDIKNHKWF 298
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 137/298 (45%), Gaps = 48/298 (16%)
Query: 18 KISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSL-REINILLSFDHP 76
++ G + +V + R+K +G A K +K R+ G + RE++IL HP
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKFIK---KRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 77 SIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDN 136
+++ + EV + D V +++E + + + K+ + E + Q+L GV YLH
Sbjct: 75 NVITLHEVYENKTD-VILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSL 133
Query: 137 WVLHRDLKTSNLLLNNQGV----LKICDFGMSRQ--YGSPLKPYTSLVVTLWYRAPELLL 190
+ H DLK N++L ++ V +KI DFG++ + +G+ K ++ T + APE ++
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEFVAPE-IV 189
Query: 191 GAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPG 250
+ DMWS+G I LL+ F G T+ + +
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL----------------------- 226
Query: 251 AKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYW 308
AN + Y F F+ + L++ D + RLL DP+KR+T+ D+L H W
Sbjct: 227 --ANVSAVNYE-----FEDEYFSNTSALAK---DFIRRLLVKDPKKRMTIQDSLQHPW 274
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 139/317 (43%), Gaps = 66/317 (20%)
Query: 5 QGCRSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSL 64
Q + +FE++ + G++G V + K++G A+K + K +E+ +L
Sbjct: 36 QNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEH-----TL 90
Query: 65 REINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLML 124
E IL + + P +V + E D+ ++YMVMEY+ + FS +
Sbjct: 91 NEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 149
Query: 125 QLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYT-SLVVTLWY 183
Q++ +YLH +++RDLK NLL++ QG +++ DFG +++ +K T L T Y
Sbjct: 150 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR----VKGRTWXLCGTPEY 205
Query: 184 RAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWP 243
APE++L +K Y+ AVD W++G ++ E+ A P F
Sbjct: 206 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF------------------------- 239
Query: 244 GLSELPGAKANFAKQPYNLLRK------RFPAASFTGSPVLSESGFDLLNRLLTYDPEKR 297
FA QP + K RFP+ S DLL LL D KR
Sbjct: 240 -----------FADQPIQIYEKIVSGKVRFPSH-------FSSDLKDLLRNLLQVDLTKR 281
Query: 298 I-----TVDDALNHYWF 309
V+D NH WF
Sbjct: 282 FGNLKNGVNDIKNHKWF 298
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 139/317 (43%), Gaps = 66/317 (20%)
Query: 5 QGCRSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSL 64
Q + +F+++ + G++G V + K+SG A+K + K +E+ +L
Sbjct: 22 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEH-----TL 76
Query: 65 REINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLML 124
E IL + + P +V + E D+ ++YMVMEY+ + FS +
Sbjct: 77 NEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 135
Query: 125 QLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYT-SLVVTLWY 183
Q++ +YLH +++RDLK NLL++ QG +++ DFG +++ +K T L T Y
Sbjct: 136 QIVLTFEYLHSLDLIYRDLKPENLLIDEQGYIQVTDFGFAKR----VKGRTWXLCGTPEY 191
Query: 184 RAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWP 243
APE++L +K Y+ AVD W++G ++ E+ A P F
Sbjct: 192 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF------------------------- 225
Query: 244 GLSELPGAKANFAKQPYNLLRK------RFPAASFTGSPVLSESGFDLLNRLLTYDPEKR 297
FA QP + K RFP+ S DLL LL D KR
Sbjct: 226 -----------FADQPIQIYEKIVSGKVRFPSH-------FSSDLKDLLRNLLQVDLTKR 267
Query: 298 I-----TVDDALNHYWF 309
V+D NH WF
Sbjct: 268 FGNLKNGVNDIKNHKWF 284
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 132/305 (43%), Gaps = 60/305 (19%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
FE +++ G IVYR + K + + ALK +K V +K EI +LL
Sbjct: 55 FEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKK----------IVRTEIGVLLR 104
Query: 73 FDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKY 132
HP+I+ +KE+ + + +V+E + + K +S + + Q+LE V Y
Sbjct: 105 LSHPNIIKLKEI-FETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAY 163
Query: 133 LHDNWVLHRDLKTSNLLLNN---QGVLKICDFGMSR--QYGSPLKPYTSLVVTLWYRAPE 187
LH+N ++HRDLK NLL LKI DFG+S+ ++ +K ++ T Y APE
Sbjct: 164 LHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMK---TVCGTPGYCAPE 220
Query: 188 LLLGAKKYSTAVDMWSVGCIMAELLAK-KPLFSGTTEVDQIDKIFKTLGTPTETIWPGLS 246
+L G Y VDMWSVG I LL +P + DQ
Sbjct: 221 ILRGC-AYGPEVDMWSVGIITYILLCGFEPFYD--ERGDQF------------------- 258
Query: 247 ELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGF---DLLNRLLTYDPEKRITVDDA 303
+ R+ + SP E DL+ +L+ DP+KR+T A
Sbjct: 259 ---------------MFRRILNCEYYFISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQA 303
Query: 304 LNHYW 308
L H W
Sbjct: 304 LQHPW 308
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 139/300 (46%), Gaps = 45/300 (15%)
Query: 18 KISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPS 77
KI EG+ GIV A + SG++VA+KK+ + ++ + L E+ I+ + H +
Sbjct: 36 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELL--------FNEVVIMRDYQHEN 87
Query: 78 IVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNW 137
+V + + D +++VME++E + + + + ++ + L +L+ + LH
Sbjct: 88 VVEMYNSYLVG-DELWVVMEFLEGGALTDIVTHTR-MNEEQIAAVCLAVLQALSVLHAQG 145
Query: 138 VLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGAKKYST 197
V+HRD+K+ ++LL + G +K+ DFG Q + LV T ++ APEL+ Y
Sbjct: 146 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELI-SRLPYGP 204
Query: 198 AVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGAKANFAK 257
VD+WS+G ++ E++ +P + P L + + N
Sbjct: 205 EVDIWSLGIMVIEMVDGEPPYFNE---------------------PPLKAMKMIRDNLPP 243
Query: 258 QPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVPLPKS 317
+ NL + SP L GF L+RLL DP +R T + L H + + P S
Sbjct: 244 RLKNLHKV---------SPSLK--GF--LDRLLVRDPAQRATAAELLKHPFLAKAGPPAS 290
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 139/317 (43%), Gaps = 66/317 (20%)
Query: 5 QGCRSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSL 64
Q + +FE++ + G++G V + K++G A+K + K +E+ +L
Sbjct: 28 QNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEH-----TL 82
Query: 65 REINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLML 124
E IL + + P +V + E D+ ++YMVMEY+ + FS +
Sbjct: 83 NEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 141
Query: 125 QLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYT-SLVVTLWY 183
Q++ +YLH +++RDLK NLL++ QG +++ DFG +++ +K T L T Y
Sbjct: 142 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR----VKGRTWXLCGTPEY 197
Query: 184 RAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWP 243
APE++L +K Y+ AVD W++G ++ E+ A P F
Sbjct: 198 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF------------------------- 231
Query: 244 GLSELPGAKANFAKQPYNLLRK------RFPAASFTGSPVLSESGFDLLNRLLTYDPEKR 297
FA QP + K RFP+ S DLL LL D KR
Sbjct: 232 -----------FADQPIQIYEKIVSGKVRFPSH-------FSSDLKDLLRNLLQVDLTKR 273
Query: 298 I-----TVDDALNHYWF 309
V+D NH WF
Sbjct: 274 FGNLKNGVNDIKNHKWF 290
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 139/300 (46%), Gaps = 45/300 (15%)
Query: 18 KISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPS 77
KI EG+ GIV A + SG++VA+KK+ + ++ + L E+ I+ + H +
Sbjct: 38 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELL--------FNEVVIMRDYQHEN 89
Query: 78 IVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNW 137
+V + + D +++VME++E + + + + ++ + L +L+ + LH
Sbjct: 90 VVEMYNSYLVG-DELWVVMEFLEGGALTDIVTHTR-MNEEQIAAVCLAVLQALSVLHAQG 147
Query: 138 VLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGAKKYST 197
V+HRD+K+ ++LL + G +K+ DFG Q + LV T ++ APEL+ Y
Sbjct: 148 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELI-SRLPYGP 206
Query: 198 AVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGAKANFAK 257
VD+WS+G ++ E++ +P + P L + + N
Sbjct: 207 EVDIWSLGIMVIEMVDGEPPYFNE---------------------PPLKAMKMIRDNLPP 245
Query: 258 QPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVPLPKS 317
+ NL + SP L GF L+RLL DP +R T + L H + + P S
Sbjct: 246 RLKNLHKV---------SPSLK--GF--LDRLLVRDPAQRATAAELLKHPFLAKAGPPAS 292
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 138/317 (43%), Gaps = 66/317 (20%)
Query: 5 QGCRSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSL 64
Q + +FE++ + G++G V + K++G A+K + K +E+ +L
Sbjct: 36 QNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEH-----TL 90
Query: 65 REINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLML 124
E IL + + P +V + E D+ ++YMVMEY + FS +
Sbjct: 91 NEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAA 149
Query: 125 QLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYT-SLVVTLWY 183
Q++ +YLH +++RDLK NL+++ QG +K+ DFG +++ +K T L T Y
Sbjct: 150 QIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKR----VKGRTWXLCGTPEY 205
Query: 184 RAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWP 243
APE++L +K Y+ AVD W++G ++ E+ A P F
Sbjct: 206 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF------------------------- 239
Query: 244 GLSELPGAKANFAKQPYNLLRK------RFPAASFTGSPVLSESGFDLLNRLLTYDPEKR 297
FA QP + K RFP+ S DLL LL D KR
Sbjct: 240 -----------FADQPIQIYEKIVSGKVRFPSH-------FSSDLKDLLRNLLQVDLTKR 281
Query: 298 I-----TVDDALNHYWF 309
V+D NH WF
Sbjct: 282 FGNLKNGVNDIKNHKWF 298
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 139/300 (46%), Gaps = 45/300 (15%)
Query: 18 KISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPS 77
KI EG+ GIV A + SG++VA+KK+ + ++ + L E+ I+ + H +
Sbjct: 27 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELL--------FNEVVIMRDYQHEN 78
Query: 78 IVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNW 137
+V + + D +++VME++E + + + + ++ + L +L+ + LH
Sbjct: 79 VVEMYNSYLVG-DELWVVMEFLEGGALTDIVTHTR-MNEEQIAAVCLAVLQALSVLHAQG 136
Query: 138 VLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGAKKYST 197
V+HRD+K+ ++LL + G +K+ DFG Q + LV T ++ APEL+ Y
Sbjct: 137 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELI-SRLPYGP 195
Query: 198 AVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGAKANFAK 257
VD+WS+G ++ E++ +P + P L + + N
Sbjct: 196 EVDIWSLGIMVIEMVDGEPPYFNE---------------------PPLKAMKMIRDNLPP 234
Query: 258 QPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVPLPKS 317
+ NL + SP L GF L+RLL DP +R T + L H + + P S
Sbjct: 235 RLKNLHKV---------SPSLK--GF--LDRLLVRDPAQRATAAELLKHPFLAKAGPPAS 281
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 139/300 (46%), Gaps = 45/300 (15%)
Query: 18 KISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPS 77
KI EG+ GIV A + SG++VA+KK+ + ++ + L E+ I+ + H +
Sbjct: 81 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELL--------FNEVVIMRDYQHEN 132
Query: 78 IVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNW 137
+V + + D +++VME++E + + + + ++ + L +L+ + LH
Sbjct: 133 VVEMYNSYLVG-DELWVVMEFLEGGALTDIVTHTR-MNEEQIAAVCLAVLQALSVLHAQG 190
Query: 138 VLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGAKKYST 197
V+HRD+K+ ++LL + G +K+ DFG Q + LV T ++ APEL+ Y
Sbjct: 191 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELI-SRLPYGP 249
Query: 198 AVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGAKANFAK 257
VD+WS+G ++ E++ +P + P L + + N
Sbjct: 250 EVDIWSLGIMVIEMVDGEPPYFNE---------------------PPLKAMKMIRDNLPP 288
Query: 258 QPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVPLPKS 317
+ NL + SP L GF L+RLL DP +R T + L H + + P S
Sbjct: 289 RLKNLHKV---------SPSLK--GF--LDRLLVRDPAQRATAAELLKHPFLAKAGPPAS 335
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 139/300 (46%), Gaps = 45/300 (15%)
Query: 18 KISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPS 77
KI EG+ GIV A + SG++VA+KK+ + ++ + L E+ I+ + H +
Sbjct: 31 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELL--------FNEVVIMRDYQHEN 82
Query: 78 IVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNW 137
+V + + D +++VME++E + + + + ++ + L +L+ + LH
Sbjct: 83 VVEMYNSYLVG-DELWVVMEFLEGGALTDIVTHTR-MNEEQIAAVCLAVLQALSVLHAQG 140
Query: 138 VLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGAKKYST 197
V+HRD+K+ ++LL + G +K+ DFG Q + LV T ++ APEL+ Y
Sbjct: 141 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELI-SRLPYGP 199
Query: 198 AVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGAKANFAK 257
VD+WS+G ++ E++ +P + P L + + N
Sbjct: 200 EVDIWSLGIMVIEMVDGEPPYFNE---------------------PPLKAMKMIRDNLPP 238
Query: 258 QPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVPLPKS 317
+ NL + SP L GF L+RLL DP +R T + L H + + P S
Sbjct: 239 RLKNLHKV---------SPSLK--GF--LDRLLVRDPAQRATAAELLKHPFLAKAGPPAS 285
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 139/307 (45%), Gaps = 52/307 (16%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
++ + + EG++G V A +G+ VALK + V K D REI+ L
Sbjct: 16 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSD-----MQGRIEREISYLRL 70
Query: 73 FDHPSIVNVKEVVMDDHDSVYMVMEYMEHDL-KWLMESMKQPFSTSEVKCLMLQLLEGVK 131
HP I+ + +V+ D + MV+EY ++L ++++ + S E + Q++ V+
Sbjct: 71 LRHPHIIKLYDVI-KSKDEIIMVIEYAGNELFDYIVQ--RDKMSEQEARRFFQQIISAVE 127
Query: 132 YLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQY--GSPLKPYTSLVVTLWYRAPELL 189
Y H + ++HRDLK NLLL+ +KI DFG+S G+ LK + Y APE++
Sbjct: 128 YCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCG---SPNYAAPEVI 184
Query: 190 LGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELP 249
G VD+WS G I+ +L ++ F + I +FK + T+ LS P
Sbjct: 185 SGKLYAGPEVDVWSCGVILYVMLCRRLPFDD----ESIPVLFKNISNGVYTLPKFLS--P 238
Query: 250 GAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWF 309
GA L+ R+L +P RI++ + + WF
Sbjct: 239 GAAG-------------------------------LIKRMLIVNPLNRISIHEIMQDDWF 267
Query: 310 HEVPLPK 316
+V LP+
Sbjct: 268 -KVDLPE 273
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 139/307 (45%), Gaps = 52/307 (16%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
++ + + EG++G V A +G+ VALK + V K D REI+ L
Sbjct: 6 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSD-----MQGRIEREISYLRL 60
Query: 73 FDHPSIVNVKEVVMDDHDSVYMVMEYMEHDL-KWLMESMKQPFSTSEVKCLMLQLLEGVK 131
HP I+ + +V+ D + MV+EY ++L ++++ + S E + Q++ V+
Sbjct: 61 LRHPHIIKLYDVI-KSKDEIIMVIEYAGNELFDYIVQ--RDKMSEQEARRFFQQIISAVE 117
Query: 132 YLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQY--GSPLKPYTSLVVTLWYRAPELL 189
Y H + ++HRDLK NLLL+ +KI DFG+S G+ LK + Y APE++
Sbjct: 118 YCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCG---SPNYAAPEVI 174
Query: 190 LGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELP 249
G VD+WS G I+ +L ++ F + I +FK + T+ LS P
Sbjct: 175 SGKLYAGPEVDVWSCGVILYVMLCRRLPFDD----ESIPVLFKNISNGVYTLPKFLS--P 228
Query: 250 GAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWF 309
GA L+ R+L +P RI++ + + WF
Sbjct: 229 GAAG-------------------------------LIKRMLIVNPLNRISIHEIMQDDWF 257
Query: 310 HEVPLPK 316
+V LP+
Sbjct: 258 -KVDLPE 263
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 140/310 (45%), Gaps = 54/310 (17%)
Query: 9 SVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREIN 68
S+ +F+ L + G++G V+ R + +G A+K +K + + +E+ +
Sbjct: 4 SLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEH------TNDER 57
Query: 69 ILLSF-DHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLL 127
++LS HP I+ + D ++M+M+Y+E + + Q F K ++
Sbjct: 58 LMLSIVTHPFIIRMWGTFQDAQ-QIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVC 116
Query: 128 EGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPE 187
++YLH +++RDLK N+LL+ G +KI DFG ++ P Y L T Y APE
Sbjct: 117 LALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKY--VPDVTY-XLCGTPDYIAPE 173
Query: 188 LLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSE 247
++ K Y+ ++D WS G ++ E+LA F + + +KI +E
Sbjct: 174 -VVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILN-------------AE 219
Query: 248 LPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRI-----TVDD 302
L RFP P +E DLL+RL+T D +R+ +D
Sbjct: 220 L-----------------RFP-------PFFNEDVKDLLSRLITRDLSQRLGNLQNGTED 255
Query: 303 ALNHYWFHEV 312
NH WF EV
Sbjct: 256 VKNHPWFKEV 265
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 139/307 (45%), Gaps = 52/307 (16%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
++ + + EG++G V A +G+ VALK + V K D REI+ L
Sbjct: 15 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSD-----MQGRIEREISYLRL 69
Query: 73 FDHPSIVNVKEVVMDDHDSVYMVMEYMEHDL-KWLMESMKQPFSTSEVKCLMLQLLEGVK 131
HP I+ + +V+ D + MV+EY ++L ++++ + S E + Q++ V+
Sbjct: 70 LRHPHIIKLYDVI-KSKDEIIMVIEYAGNELFDYIVQ--RDKMSEQEARRFFQQIISAVE 126
Query: 132 YLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQY--GSPLKPYTSLVVTLWYRAPELL 189
Y H + ++HRDLK NLLL+ +KI DFG+S G+ LK + Y APE++
Sbjct: 127 YCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCG---SPNYAAPEVI 183
Query: 190 LGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELP 249
G VD+WS G I+ +L ++ F + I +FK + T+ LS P
Sbjct: 184 SGKLYAGPEVDVWSCGVILYVMLCRRLPFDD----ESIPVLFKNISNGVYTLPKFLS--P 237
Query: 250 GAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWF 309
GA L+ R+L +P RI++ + + WF
Sbjct: 238 GAAG-------------------------------LIKRMLIVNPLNRISIHEIMQDDWF 266
Query: 310 HEVPLPK 316
+V LP+
Sbjct: 267 -KVDLPE 272
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 139/307 (45%), Gaps = 52/307 (16%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
++ + + EG++G V A +G+ VALK + V K D REI+ L
Sbjct: 10 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSD-----MQGRIEREISYLRL 64
Query: 73 FDHPSIVNVKEVVMDDHDSVYMVMEYMEHDL-KWLMESMKQPFSTSEVKCLMLQLLEGVK 131
HP I+ + +V+ D + MV+EY ++L ++++ + S E + Q++ V+
Sbjct: 65 LRHPHIIKLYDVI-KSKDEIIMVIEYAGNELFDYIVQ--RDKMSEQEARRFFQQIISAVE 121
Query: 132 YLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQY--GSPLKPYTSLVVTLWYRAPELL 189
Y H + ++HRDLK NLLL+ +KI DFG+S G+ LK + Y APE++
Sbjct: 122 YCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCG---SPNYAAPEVI 178
Query: 190 LGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELP 249
G VD+WS G I+ +L ++ F + I +FK + T+ LS P
Sbjct: 179 SGKLYAGPEVDVWSCGVILYVMLCRRLPFDD----ESIPVLFKNISNGVYTLPKFLS--P 232
Query: 250 GAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWF 309
GA L+ R+L +P RI++ + + WF
Sbjct: 233 GAAG-------------------------------LIKRMLIVNPLNRISIHEIMQDDWF 261
Query: 310 HEVPLPK 316
+V LP+
Sbjct: 262 -KVDLPE 267
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 141/302 (46%), Gaps = 53/302 (17%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILL 71
++ + KI +G G VY A D +G+ VA++++ + K++ + + EI ++
Sbjct: 22 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELI--------INEILVMR 73
Query: 72 SFDHPSIVNVKEVVMDDH---DSVYMVMEYMEHDLKWLMESMKQP-FSTSEVKCLMLQLL 127
+P+IVN +D + D +++VMEY+ L + + + ++ + + L
Sbjct: 74 ENKNPNIVNY----LDSYLVGDELWVVMEYLAGG--SLTDVVTETCMDEGQIAAVCRECL 127
Query: 128 EGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPE 187
+ +++LH N V+HRD+K+ N+LL G +K+ DFG Q + +V T ++ APE
Sbjct: 128 QALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPE 187
Query: 188 LLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSE 247
++ K Y VD+WS+G + E++ +P + + + + T GTP E
Sbjct: 188 VVT-RKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRAL-YLIATNGTP---------E 236
Query: 248 LPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHY 307
L + P L +A F D LNR L D EKR + + + H
Sbjct: 237 L--------QNPEKL------SAIFR----------DFLNRCLEMDVEKRGSAKELIQHQ 272
Query: 308 WF 309
+
Sbjct: 273 FL 274
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 139/317 (43%), Gaps = 66/317 (20%)
Query: 5 QGCRSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSL 64
Q + +F+++ + G++G V + K+SG A+K + K +E+ +L
Sbjct: 35 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEH-----TL 89
Query: 65 REINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLML 124
E IL + + P +V + E D+ ++YMVMEY+ + FS +
Sbjct: 90 NEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 125 QLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYT-SLVVTLWY 183
Q++ +YLH +++RDLK NLL++ QG +++ DFG +++ +K T L T Y
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR----VKGRTWXLCGTPEY 204
Query: 184 RAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWP 243
APE++L +K Y+ AVD W++G ++ ++ A P F
Sbjct: 205 LAPEIIL-SKGYNKAVDWWALGVLIYQMAAGYPPF------------------------- 238
Query: 244 GLSELPGAKANFAKQPYNLLRK------RFPAASFTGSPVLSESGFDLLNRLLTYDPEKR 297
FA QP + K RFP+ S DLL LL D KR
Sbjct: 239 -----------FADQPIQIYEKIVSGKVRFPSH-------FSSDLKDLLRNLLQVDLTKR 280
Query: 298 I-----TVDDALNHYWF 309
V+D NH WF
Sbjct: 281 FGNLKNGVNDIKNHKWF 297
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 137/305 (44%), Gaps = 44/305 (14%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSL-REINILL 71
+E ++ G + IV + R K +G+ A K +K R+ G + RE+NIL
Sbjct: 7 YEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKK---RRLSSSRRGVSREEIEREVNILR 63
Query: 72 SFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVK 131
HP+I+ + ++ + D V +++E + + + K+ + E + Q+L+GV
Sbjct: 64 EIRHPNIITLHDIFENKTD-VVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVH 122
Query: 132 YLHDNWVLHRDLKTSNLLLNNQGV----LKICDFGMSRQYGSPLKPYTSLVVTLWYRAPE 187
YLH + H DLK N++L ++ V +K+ DFG++ + + + ++ T + APE
Sbjct: 123 YLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAG-NEFKNIFGTPEFVAPE 181
Query: 188 LLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSE 247
++ + DMWS+G I LL+ F G T+ + +
Sbjct: 182 -IVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETL-------------------- 220
Query: 248 LPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHY 307
N + Y+ F F+ + SE D + RLL DP++R+T+ +L H
Sbjct: 221 -----TNISAVNYD-----FDEEYFSNT---SELAKDFIRRLLVKDPKRRMTIAQSLEHS 267
Query: 308 WFHEV 312
W +
Sbjct: 268 WIKAI 272
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 139/317 (43%), Gaps = 66/317 (20%)
Query: 5 QGCRSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSL 64
Q + +F+++ + G++G V + K+SG A+K + K +E+ +L
Sbjct: 35 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEH-----TL 89
Query: 65 REINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLML 124
E IL + + P +V + E D+ ++YMVMEY+ + F+ +
Sbjct: 90 NEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAA 148
Query: 125 QLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYT-SLVVTLWY 183
Q++ +YLH +++RDLK NLL++ QG +++ DFG +++ +K T L T Y
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR----VKGRTWXLCGTPEY 204
Query: 184 RAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWP 243
APE++L +K Y+ AVD W++G ++ E+ A P F
Sbjct: 205 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF------------------------- 238
Query: 244 GLSELPGAKANFAKQPYNLLRK------RFPAASFTGSPVLSESGFDLLNRLLTYDPEKR 297
FA QP + K RFP+ S DLL LL D KR
Sbjct: 239 -----------FADQPIQIYEKIVSGKVRFPSH-------FSSDLKDLLRNLLQVDLTKR 280
Query: 298 I-----TVDDALNHYWF 309
V+D NH WF
Sbjct: 281 FGNLKNGVNDIKNHKWF 297
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 87/320 (27%), Positives = 140/320 (43%), Gaps = 66/320 (20%)
Query: 2 NMLQGCRSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPI 61
N Q + +FE++ + G++G V + ++G A+K + K +E+
Sbjct: 33 NPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEH---- 88
Query: 62 SSLREINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKC 121
+L E IL + + P +V + E D+ ++YMVMEY+ + FS +
Sbjct: 89 -TLNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF 146
Query: 122 LMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYT-SLVVT 180
Q++ +YLH +++RDLK NLL++ QG +++ DFG +++ +K T +L T
Sbjct: 147 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR----VKGRTWTLCGT 202
Query: 181 LWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTET 240
Y APE++L +K Y+ AVD W++G ++ E+ A P F
Sbjct: 203 PEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF---------------------- 239
Query: 241 IWPGLSELPGAKANFAKQPYNLLRK------RFPAASFTGSPVLSESGFDLLNRLLTYDP 294
FA QP + K RFP+ S DLL LL D
Sbjct: 240 --------------FADQPIQIYEKIVSGKVRFPSH-------FSSDLKDLLRNLLQVDL 278
Query: 295 EKRI-----TVDDALNHYWF 309
KR V+D NH WF
Sbjct: 279 TKRFGNLKNGVNDIKNHKWF 298
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 87/320 (27%), Positives = 140/320 (43%), Gaps = 66/320 (20%)
Query: 2 NMLQGCRSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPI 61
N Q + +FE++ + G++G V + ++G A+K + K +E+
Sbjct: 18 NPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEH---- 73
Query: 62 SSLREINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKC 121
+L E IL + + P +V + E D+ ++YMVMEY+ + FS +
Sbjct: 74 -TLNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF 131
Query: 122 LMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYT-SLVVT 180
Q++ +YLH +++RDLK NLL++ QG +++ DFG +++ +K T +L T
Sbjct: 132 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR----VKGRTWTLCGT 187
Query: 181 LWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTET 240
Y APE++L +K Y+ AVD W++G ++ E+ A P F
Sbjct: 188 PEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF---------------------- 224
Query: 241 IWPGLSELPGAKANFAKQPYNLLRK------RFPAASFTGSPVLSESGFDLLNRLLTYDP 294
FA QP + K RFP+ S DLL LL D
Sbjct: 225 --------------FADQPIQIYEKIVSGKVRFPSH-------FSSDLKDLLRNLLQVDL 263
Query: 295 EKRI-----TVDDALNHYWF 309
KR V+D NH WF
Sbjct: 264 TKRFGNLKDGVNDIKNHKWF 283
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 110/244 (45%), Gaps = 39/244 (15%)
Query: 66 EINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQ 125
EI+I S H +V +D+D V++V+E + ++ + E + + Q
Sbjct: 67 EISIHRSLAHQHVVGFHGF-FEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQ 125
Query: 126 LLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRA 185
++ G +YLH N V+HRDLK NL LN +KI DFG++ + + +L T Y A
Sbjct: 126 IVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIA 185
Query: 186 PELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGL 245
PE +L K +S VD+WS+GCIM LL KP P ET
Sbjct: 186 PE-VLSKKGHSFEVDVWSIGCIMYTLLVGKP--------------------PFET----- 219
Query: 246 SELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALN 305
S L K Y++ + P A+ L+ ++L DP R T+++ LN
Sbjct: 220 SCLKETYLRIKKNEYSIPKHINPVAA------------SLIQKMLQTDPTARPTINELLN 267
Query: 306 HYWF 309
+F
Sbjct: 268 DEFF 271
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 110/244 (45%), Gaps = 39/244 (15%)
Query: 66 EINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQ 125
EI+I S H +V +D+D V++V+E + ++ + E + + Q
Sbjct: 71 EISIHRSLAHQHVVGFHGF-FEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQ 129
Query: 126 LLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRA 185
++ G +YLH N V+HRDLK NL LN +KI DFG++ + + +L T Y A
Sbjct: 130 IVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIA 189
Query: 186 PELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGL 245
PE +L K +S VD+WS+GCIM LL KP P ET
Sbjct: 190 PE-VLSKKGHSFEVDVWSIGCIMYTLLVGKP--------------------PFET----- 223
Query: 246 SELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALN 305
S L K Y++ + P A+ L+ ++L DP R T+++ LN
Sbjct: 224 SCLKETYLRIKKNEYSIPKHINPVAA------------SLIQKMLQTDPTARPTINELLN 271
Query: 306 HYWF 309
+F
Sbjct: 272 DEFF 275
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 138/317 (43%), Gaps = 66/317 (20%)
Query: 5 QGCRSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSL 64
Q + +F+++ + G++G V + K+SG A+K + K +E+ +L
Sbjct: 56 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEH-----TL 110
Query: 65 REINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLML 124
E IL + + P +V + E D+ ++YMVMEY+ + F +
Sbjct: 111 NEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAA 169
Query: 125 QLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYT-SLVVTLWY 183
Q++ +YLH +++RDLK NLL++ QG +++ DFG +++ +K T L T Y
Sbjct: 170 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR----VKGRTWXLCGTPEY 225
Query: 184 RAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWP 243
APE++L +K Y+ AVD W++G ++ E+ A P F
Sbjct: 226 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF------------------------- 259
Query: 244 GLSELPGAKANFAKQPYNLLRK------RFPAASFTGSPVLSESGFDLLNRLLTYDPEKR 297
FA QP + K RFP+ S DLL LL D KR
Sbjct: 260 -----------FADQPIQIYEKIVSGKVRFPSH-------FSSDLKDLLRNLLQVDLTKR 301
Query: 298 I-----TVDDALNHYWF 309
V+D NH WF
Sbjct: 302 FGNLKNGVNDIKNHKWF 318
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 110/244 (45%), Gaps = 39/244 (15%)
Query: 66 EINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQ 125
EI+I S H +V +D+D V++V+E + ++ + E + + Q
Sbjct: 67 EISIHRSLAHQHVVGFHGF-FEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQ 125
Query: 126 LLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRA 185
++ G +YLH N V+HRDLK NL LN +KI DFG++ + + +L T Y A
Sbjct: 126 IVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIA 185
Query: 186 PELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGL 245
PE +L K +S VD+WS+GCIM LL KP P ET
Sbjct: 186 PE-VLSKKGHSFEVDVWSIGCIMYTLLVGKP--------------------PFET----- 219
Query: 246 SELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALN 305
S L K Y++ + P A+ L+ ++L DP R T+++ LN
Sbjct: 220 SCLKETYLRIKKNEYSIPKHINPVAA------------SLIQKMLQTDPTARPTINELLN 267
Query: 306 HYWF 309
+F
Sbjct: 268 DEFF 271
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 136/298 (45%), Gaps = 48/298 (16%)
Query: 18 KISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSL-REINILLSFDHP 76
++ G + +V + R+K +G A K +K R+ G + RE++IL HP
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKFIKK---RRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 77 SIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDN 136
+++ + EV + D V ++ E + + + K+ + E + Q+L GV YLH
Sbjct: 75 NVITLHEVYENKTD-VILIGELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSL 133
Query: 137 WVLHRDLKTSNLLLNNQGV----LKICDFGMSRQ--YGSPLKPYTSLVVTLWYRAPELLL 190
+ H DLK N++L ++ V +KI DFG++ + +G+ K ++ T + APE ++
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEFVAPE-IV 189
Query: 191 GAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPG 250
+ DMWS+G I LL+ F G T+ + +
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL----------------------- 226
Query: 251 AKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYW 308
AN + Y F F+ + L++ D + RLL DP+KR+T+ D+L H W
Sbjct: 227 --ANVSAVNY-----EFEDEYFSNTSALAK---DFIRRLLVKDPKKRMTIQDSLQHPW 274
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 90/315 (28%), Positives = 145/315 (46%), Gaps = 60/315 (19%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
+E I G+Y + R K + A+K + + K D E EI ILL
Sbjct: 24 YEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKS---KRDPTE---------EIEILLR 71
Query: 73 F-DHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPF-STSEVKCLMLQLLEGV 130
+ HP+I+ +K+V DD VY+V E M+ + L + ++Q F S E ++ + + V
Sbjct: 72 YGQHPNIITLKDV-YDDGKYVYVVTELMKGG-ELLDKILRQKFFSEREASAVLFTITKTV 129
Query: 131 KYLHDNWVLHRDLKTSNLLL----NNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYR-- 184
+YLH V+HRDLK SN+L N ++ICDFG ++Q L+ L++T Y
Sbjct: 130 EYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQ----LRAENGLLMTPCYTAN 185
Query: 185 --APELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIW 242
APE +L + Y A D+WS+G ++ +L F+ + D ++I +G+
Sbjct: 186 FVAPE-VLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPD-DTPEEILARIGS------ 237
Query: 243 PGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDD 302
G L G N +S++ DL++++L DP +R+T
Sbjct: 238 -GKFSLSGGYWN----------------------SVSDTAKDLVSKMLHVDPHQRLTAAL 274
Query: 303 ALNHYWF-HEVPLPK 316
L H W H LP+
Sbjct: 275 VLRHPWIVHWDQLPQ 289
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 131/320 (40%), Gaps = 66/320 (20%)
Query: 16 LNKISEGTYGIVYRARDKKSGEIVALK---KVKMNVGRKEDCLEYGFPISSLREINILLS 72
L I +G + V AR +G+ VA+K K ++N + RE+ I+
Sbjct: 19 LKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLF---------REVRIMKV 69
Query: 73 FDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKY 132
+HP+IV + EV+ + ++Y+VMEY + E + Q++ V+Y
Sbjct: 70 LNHPNIVKLFEVI-ETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQY 128
Query: 133 LHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQ--YGSPLKPYTSLVVTLWYRAPELLL 190
H +++HRDLK NLLL+ +KI DFG S + +G+ L + + Y APEL
Sbjct: 129 CHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCG---SPPYAAPELFQ 185
Query: 191 GAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPG 250
G K VD+WS+G I+ L++ F G
Sbjct: 186 GKKYDGPEVDVWSLGVILYTLVSGSLPFDG------------------------------ 215
Query: 251 AKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWF- 309
Q LR+R + +S +LL + L +P KR T++ + W
Sbjct: 216 -------QNLKELRERVLRGKYRIPFYMSTDCENLLKKFLILNPSKRGTLEQIMKDRWMN 268
Query: 310 --HE--------VPLPKSKD 319
HE PLP KD
Sbjct: 269 VGHEDDELKPYVAPLPDYKD 288
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 138/311 (44%), Gaps = 54/311 (17%)
Query: 5 QGCRSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSL 64
Q + +F+++ + G++G V + K+SG A+K + K +E+ +L
Sbjct: 35 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEH-----TL 89
Query: 65 REINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLML 124
E IL + + P +V + E D+ ++YMVMEY+ + FS +
Sbjct: 90 NEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 125 QLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYT-SLVVTLWY 183
Q++ +YLH +++RDLK NLL++ QG +++ DFG +++ +K T L T Y
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR----VKGRTWXLCGTPEY 204
Query: 184 RAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWP 243
APE++L +K Y+ AVD W++G ++ E+ A P F + +KI
Sbjct: 205 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADEPIQIYEKIVSG---------- 253
Query: 244 GLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRI----- 298
+ RFP+ S DLL LL D KR
Sbjct: 254 --------------------KVRFPSH-------FSSDLKDLLRNLLQVDLTKRFGNLKN 286
Query: 299 TVDDALNHYWF 309
V+D NH WF
Sbjct: 287 GVNDIKNHKWF 297
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 139/317 (43%), Gaps = 66/317 (20%)
Query: 5 QGCRSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSL 64
Q + +F+++ + G++G V + K+SG A+K + K +E+ +L
Sbjct: 35 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEH-----TL 89
Query: 65 REINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLML 124
E IL + + P +V + E D+ ++YMVMEY+ + FS +
Sbjct: 90 NEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 125 QLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYT-SLVVTLWY 183
Q++ +YLH +++RDLK NL+++ QG +++ DFG +++ +K T L T Y
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLIIDQQGYIQVTDFGFAKR----VKGRTWXLCGTPEY 204
Query: 184 RAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWP 243
APE+++ +K Y+ AVD W++G ++ E+ A P F
Sbjct: 205 LAPEIII-SKGYNKAVDWWALGVLIYEMAAGYPPF------------------------- 238
Query: 244 GLSELPGAKANFAKQPYNLLRK------RFPAASFTGSPVLSESGFDLLNRLLTYDPEKR 297
FA QP + K RFP+ S DLL LL D KR
Sbjct: 239 -----------FADQPIQIYEKIVSGKVRFPSH-------FSSDLKDLLRNLLQVDLTKR 280
Query: 298 I-----TVDDALNHYWF 309
V+D NH WF
Sbjct: 281 FGNLKNGVNDIKNHKWF 297
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 117/224 (52%), Gaps = 12/224 (5%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILL 71
+F L + +G++G V A K + E+ A+K +K +V ++D +E ++ E +L
Sbjct: 20 DFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVE-----CTMVEKRVLA 74
Query: 72 SFDHPSIVNVKEVVMDDHDSVYMVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEGV 130
D P + D +Y VMEY+ DL + ++ + + F + ++ G+
Sbjct: 75 LLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGK-FKEPQAVFYAAEISIGL 133
Query: 131 KYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLL 190
+LH +++RDLK N++L+++G +KI DFGM +++ T Y APE ++
Sbjct: 134 FFLHKRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTREFCGTPDYIAPE-II 192
Query: 191 GAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTL 234
+ Y +VD W+ G ++ E+LA +P F G E D++F+++
Sbjct: 193 AYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDE----DELFQSI 232
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 87/320 (27%), Positives = 139/320 (43%), Gaps = 66/320 (20%)
Query: 2 NMLQGCRSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPI 61
N Q + +FE++ + G++G V + ++G A+K + K +E+
Sbjct: 32 NPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEH---- 87
Query: 62 SSLREINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKC 121
+L E IL + + P +V + E D+ ++YMVMEY+ + FS +
Sbjct: 88 -TLNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF 145
Query: 122 LMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYT-SLVVT 180
Q++ +YLH +++RDLK NLL++ QG +++ DFG +++ +K T L T
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR----VKGRTWXLCGT 201
Query: 181 LWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTET 240
Y APE++L +K Y+ AVD W++G ++ E+ A P F
Sbjct: 202 PEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF---------------------- 238
Query: 241 IWPGLSELPGAKANFAKQPYNLLRK------RFPAASFTGSPVLSESGFDLLNRLLTYDP 294
FA QP + K RFP+ S DLL LL D
Sbjct: 239 --------------FADQPIQIYEKIVSGKVRFPSH-------FSSDLKDLLRNLLQVDL 277
Query: 295 EKRI-----TVDDALNHYWF 309
KR V+D NH WF
Sbjct: 278 TKRFGNLKDGVNDIKNHKWF 297
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 138/317 (43%), Gaps = 66/317 (20%)
Query: 5 QGCRSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSL 64
Q + +F+++ + G++G V + K+SG A+K + K +E+ +L
Sbjct: 35 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEH-----TL 89
Query: 65 REINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLML 124
E IL + + P +V + E D+ ++YMVMEY+ + F +
Sbjct: 90 NEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAA 148
Query: 125 QLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYT-SLVVTLWY 183
Q++ +YLH +++RDLK NLL++ QG +++ DFG +++ +K T L T Y
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR----VKGRTWXLCGTPEY 204
Query: 184 RAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWP 243
APE++L +K Y+ AVD W++G ++ E+ A P F
Sbjct: 205 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF------------------------- 238
Query: 244 GLSELPGAKANFAKQPYNLLRK------RFPAASFTGSPVLSESGFDLLNRLLTYDPEKR 297
FA QP + K RFP+ S DLL LL D KR
Sbjct: 239 -----------FADQPIQIYEKIVSGKVRFPSH-------FSSDLKDLLRNLLQVDLTKR 280
Query: 298 I-----TVDDALNHYWF 309
V+D NH WF
Sbjct: 281 FGNLKNGVNDIKNHKWF 297
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 133/300 (44%), Gaps = 46/300 (15%)
Query: 9 SVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREIN 68
++ +FE + +G +G VY AR+KKS IVALK + + KE G REI
Sbjct: 21 TIDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKE-----GVEHQLRREIE 75
Query: 69 ILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLE 128
I HP+I+ + D +Y+++EY + F +M +L +
Sbjct: 76 IQAHLHHPNILRLYNYFYDRR-RIYLILEYAPRGELYKELQKSCTFDEQRTATIMEELAD 134
Query: 129 GVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPEL 188
+ Y H V+HRD+K NLLL +G LKI DFG S +P ++ TL Y PE+
Sbjct: 135 ALMYCHGKKVIHRDIKPENLLLGLKGELKIADFGWSVH--APSLRRKTMCGTLDYLPPEM 192
Query: 189 LLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSEL 248
+ G + ++ VD+W +G + ELL P F + + +I K
Sbjct: 193 IEG-RMHNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIVK---------------- 235
Query: 249 PGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYW 308
+ +FPA+ TG+ DL+++LL ++P +R+ + H W
Sbjct: 236 --------------VDLKFPASVPTGAQ-------DLISKLLRHNPSERLPLAQVSAHPW 274
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 138/317 (43%), Gaps = 66/317 (20%)
Query: 5 QGCRSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSL 64
Q + +F+++ + G++G V + K+SG A+K + K +E+ +L
Sbjct: 35 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEH-----TL 89
Query: 65 REINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLML 124
E IL + + P +V + E D+ ++YMVMEY+ + F +
Sbjct: 90 NEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAA 148
Query: 125 QLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYT-SLVVTLWY 183
Q++ +YLH +++RDLK NLL++ QG +++ DFG +++ +K T L T Y
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR----VKGRTWXLCGTPEY 204
Query: 184 RAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWP 243
APE++L +K Y+ AVD W++G ++ E+ A P F
Sbjct: 205 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF------------------------- 238
Query: 244 GLSELPGAKANFAKQPYNLLRK------RFPAASFTGSPVLSESGFDLLNRLLTYDPEKR 297
FA QP + K RFP+ S DLL LL D KR
Sbjct: 239 -----------FADQPIQIYEKIVSGKVRFPSH-------FSSDLKDLLRNLLQVDLTKR 280
Query: 298 I-----TVDDALNHYWF 309
V+D NH WF
Sbjct: 281 FGNLKNGVNDIKNHKWF 297
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 138/317 (43%), Gaps = 66/317 (20%)
Query: 5 QGCRSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSL 64
Q + +F+++ + G++G V + K+SG A+K + K +E+ +L
Sbjct: 35 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEH-----TL 89
Query: 65 REINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLML 124
E IL + + P +V + E D+ ++YMVMEY+ + F +
Sbjct: 90 NEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAA 148
Query: 125 QLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYT-SLVVTLWY 183
Q++ +YLH +++RDLK NLL++ QG +++ DFG +++ +K T L T Y
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR----VKGRTWXLCGTPEY 204
Query: 184 RAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWP 243
APE++L +K Y+ AVD W++G ++ E+ A P F
Sbjct: 205 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF------------------------- 238
Query: 244 GLSELPGAKANFAKQPYNLLRK------RFPAASFTGSPVLSESGFDLLNRLLTYDPEKR 297
FA QP + K RFP+ S DLL LL D KR
Sbjct: 239 -----------FADQPIQIYEKIVSGKVRFPSH-------FSSDLKDLLRNLLQVDLTKR 280
Query: 298 I-----TVDDALNHYWF 309
V+D NH WF
Sbjct: 281 FGNLKNGVNDIKNHKWF 297
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 132/306 (43%), Gaps = 61/306 (19%)
Query: 19 ISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINIL-LSFDHPS 77
+ EG++ I + KKS + A+K + + ++ +EI L L HP+
Sbjct: 19 LGEGSFSICRKCVHKKSNQAFAVKIISKRM-----------EANTQKEITALKLCEGHPN 67
Query: 78 IVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNW 137
IV + EV D ++VME + + K+ FS +E +M +L+ V ++HD
Sbjct: 68 IVKLHEV-FHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVG 126
Query: 138 VLHRDLKTSNLLL---NNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGAKK 194
V+HRDLK NLL N+ +KI DFG +R +P + TL Y APE LL
Sbjct: 127 VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPE-LLNQNG 185
Query: 195 YSTAVDMWSVGCIMAELLAKKPLFSG-------TTEVDQIDKIFKTLGTPTETIWPGLSE 247
Y + D+WS+G I+ +L+ + F T+ V+ + KI
Sbjct: 186 YDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKI----------------- 228
Query: 248 LPGAKANFAKQPYNLLRKRFPAASFTGSP--VLSESGFDLLNRLLTYDPEKRITVDDALN 305
K +F SF G +S+ DL+ LLT DP KR+ +
Sbjct: 229 ---KKGDF---------------SFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRY 270
Query: 306 HYWFHE 311
+ W +
Sbjct: 271 NEWLQD 276
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 87/320 (27%), Positives = 139/320 (43%), Gaps = 66/320 (20%)
Query: 2 NMLQGCRSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPI 61
N Q + +FE++ + G++G V + ++G A+K + K +E+
Sbjct: 32 NPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEH---- 87
Query: 62 SSLREINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKC 121
+L E IL + + P +V + E D+ ++YMVMEY+ + FS +
Sbjct: 88 -TLNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF 145
Query: 122 LMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYT-SLVVT 180
Q++ +YLH +++RDLK NLL++ QG +++ DFG +++ +K T L T
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR----VKGRTWXLCGT 201
Query: 181 LWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTET 240
Y APE++L +K Y+ AVD W++G ++ E+ A P F
Sbjct: 202 PEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF---------------------- 238
Query: 241 IWPGLSELPGAKANFAKQPYNLLRK------RFPAASFTGSPVLSESGFDLLNRLLTYDP 294
FA QP + K RFP+ S DLL LL D
Sbjct: 239 --------------FADQPIQIYEKIVSGKVRFPSH-------FSSDLKDLLRNLLQVDL 277
Query: 295 EKRI-----TVDDALNHYWF 309
KR V+D NH WF
Sbjct: 278 TKRFGNLKNGVNDIKNHKWF 297
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 87/320 (27%), Positives = 139/320 (43%), Gaps = 66/320 (20%)
Query: 2 NMLQGCRSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPI 61
N Q + +FE++ + G++G V + ++G A+K + K +E+
Sbjct: 33 NPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEH---- 88
Query: 62 SSLREINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKC 121
+L E IL + + P +V + E D+ ++YMVMEY+ + FS +
Sbjct: 89 -TLNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF 146
Query: 122 LMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYT-SLVVT 180
Q++ +YLH +++RDLK NLL++ QG +++ DFG +++ +K T L T
Sbjct: 147 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR----VKGRTWXLCGT 202
Query: 181 LWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTET 240
Y APE++L +K Y+ AVD W++G ++ E+ A P F
Sbjct: 203 PEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF---------------------- 239
Query: 241 IWPGLSELPGAKANFAKQPYNLLRK------RFPAASFTGSPVLSESGFDLLNRLLTYDP 294
FA QP + K RFP+ S DLL LL D
Sbjct: 240 --------------FADQPIQIYEKIVSGKVRFPSH-------FSSDLKDLLRNLLQVDL 278
Query: 295 EKRI-----TVDDALNHYWF 309
KR V+D NH WF
Sbjct: 279 TKRFGNLKNGVNDIKNHKWF 298
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 87/320 (27%), Positives = 139/320 (43%), Gaps = 66/320 (20%)
Query: 2 NMLQGCRSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPI 61
N Q + +FE++ + G++G V + ++G A+K + K +E+
Sbjct: 32 NPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEH---- 87
Query: 62 SSLREINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKC 121
+L E IL + + P +V + E D+ ++YMVMEY+ + FS +
Sbjct: 88 -TLNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF 145
Query: 122 LMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYT-SLVVT 180
Q++ +YLH +++RDLK NLL++ QG +++ DFG +++ +K T L T
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR----VKGRTWXLCGT 201
Query: 181 LWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTET 240
Y APE++L +K Y+ AVD W++G ++ E+ A P F
Sbjct: 202 PEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF---------------------- 238
Query: 241 IWPGLSELPGAKANFAKQPYNLLRK------RFPAASFTGSPVLSESGFDLLNRLLTYDP 294
FA QP + K RFP+ S DLL LL D
Sbjct: 239 --------------FADQPIQIYEKIVSGKVRFPSH-------FSSDLKDLLRNLLQVDL 277
Query: 295 EKRI-----TVDDALNHYWF 309
KR V+D NH WF
Sbjct: 278 TKRFGNLKDGVNDIKNHKWF 297
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 109/244 (44%), Gaps = 39/244 (15%)
Query: 66 EINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQ 125
EI+I S H +V +D+D V++V+E + ++ + E + + Q
Sbjct: 65 EISIHRSLAHQHVVGFHGF-FEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQ 123
Query: 126 LLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRA 185
++ G +YLH N V+HRDLK NL LN +KI DFG++ + + L T Y A
Sbjct: 124 IVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIA 183
Query: 186 PELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGL 245
PE +L K +S VD+WS+GCIM LL KP P ET
Sbjct: 184 PE-VLSKKGHSFEVDVWSIGCIMYTLLVGKP--------------------PFET----- 217
Query: 246 SELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALN 305
S L K Y++ + P A+ L+ ++L DP R T+++ LN
Sbjct: 218 SCLKETYLRIKKNEYSIPKHINPVAA------------SLIQKMLQTDPTARPTINELLN 265
Query: 306 HYWF 309
+F
Sbjct: 266 DEFF 269
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 87/320 (27%), Positives = 139/320 (43%), Gaps = 66/320 (20%)
Query: 2 NMLQGCRSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPI 61
N Q + +FE++ + G++G V + ++G A+K + K +E+
Sbjct: 32 NPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEH---- 87
Query: 62 SSLREINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKC 121
+L E IL + + P +V + E D+ ++YMVMEY + FS +
Sbjct: 88 -TLNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF 145
Query: 122 LMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYT-SLVVT 180
Q++ +YLH +++RDLK NL+++ QG +K+ DFG++++ +K T L T
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGLAKR----VKGRTWXLCGT 201
Query: 181 LWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTET 240
Y APE++L +K Y+ AVD W++G ++ E+ A P F
Sbjct: 202 PEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF---------------------- 238
Query: 241 IWPGLSELPGAKANFAKQPYNLLRK------RFPAASFTGSPVLSESGFDLLNRLLTYDP 294
FA QP + K RFP+ S DLL LL D
Sbjct: 239 --------------FADQPIQIYEKIVSGKVRFPSH-------FSSDLKDLLRNLLQVDL 277
Query: 295 EKRI-----TVDDALNHYWF 309
KR V+D NH WF
Sbjct: 278 TKRFGNLKNGVNDIKNHKWF 297
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 87/320 (27%), Positives = 139/320 (43%), Gaps = 66/320 (20%)
Query: 2 NMLQGCRSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPI 61
N Q + +FE++ + G++G V + ++G A+K + K +E+
Sbjct: 32 NPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEH---- 87
Query: 62 SSLREINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKC 121
+L E IL + + P +V + E D+ ++YMVMEY+ + FS +
Sbjct: 88 -TLNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF 145
Query: 122 LMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYT-SLVVT 180
Q++ +YLH +++RDLK NLL++ QG +++ DFG +++ +K T L T
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR----VKGRTWXLCGT 201
Query: 181 LWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTET 240
Y APE++L +K Y+ AVD W++G ++ E+ A P F
Sbjct: 202 PEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF---------------------- 238
Query: 241 IWPGLSELPGAKANFAKQPYNLLRK------RFPAASFTGSPVLSESGFDLLNRLLTYDP 294
FA QP + K RFP+ S DLL LL D
Sbjct: 239 --------------FADQPIQIYEKIVSGKVRFPSH-------FSSDLKDLLRNLLQVDL 277
Query: 295 EKRI-----TVDDALNHYWF 309
KR V+D NH WF
Sbjct: 278 TKRFGNLKNGVNDIKNHKWF 297
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 138/317 (43%), Gaps = 66/317 (20%)
Query: 5 QGCRSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSL 64
Q + +F+++ + G++G V + K+SG A+K + K +E+ +L
Sbjct: 30 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEH-----TL 84
Query: 65 REINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLML 124
E IL + + P +V + E D+ ++YMVMEY+ + F +
Sbjct: 85 NEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAA 143
Query: 125 QLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYT-SLVVTLWY 183
Q++ +YLH +++RDLK NLL++ QG +++ DFG +++ +K T L T Y
Sbjct: 144 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR----VKGRTWXLCGTPEY 199
Query: 184 RAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWP 243
APE++L +K Y+ AVD W++G ++ E+ A P F
Sbjct: 200 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF------------------------- 233
Query: 244 GLSELPGAKANFAKQPYNLLRK------RFPAASFTGSPVLSESGFDLLNRLLTYDPEKR 297
FA QP + K RFP+ S DLL LL D KR
Sbjct: 234 -----------FADQPIQIYEKIVSGKVRFPSH-------FSSDLKDLLRNLLQVDLTKR 275
Query: 298 I-----TVDDALNHYWF 309
V+D NH WF
Sbjct: 276 FGNLKNGVNDIKNHKWF 292
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 142/302 (47%), Gaps = 53/302 (17%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILL 71
++ + KI +G G VY A D +G+ VA++++ + K++ + + EI ++
Sbjct: 22 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELI--------INEILVMR 73
Query: 72 SFDHPSIVNVKEVVMDDH---DSVYMVMEYMEHDLKWLMESMKQP-FSTSEVKCLMLQLL 127
+P+IVN +D + D +++VMEY+ L + + + ++ + + L
Sbjct: 74 ENKNPNIVNY----LDSYLVGDELWVVMEYLAGG--SLTDVVTETCMDEGQIAAVCRECL 127
Query: 128 EGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPE 187
+ +++LH N V+HR++K+ N+LL G +K+ DFG Q +++V T ++ APE
Sbjct: 128 QALEFLHSNQVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPE 187
Query: 188 LLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSE 247
++ K Y VD+WS+G + E++ +P + + + + T GTP E
Sbjct: 188 VVT-RKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRAL-YLIATNGTP---------E 236
Query: 248 LPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHY 307
L + P L +A F D LNR L D EKR + + + H
Sbjct: 237 L--------QNPEKL------SAIFR----------DFLNRCLEMDVEKRGSAKELIQHQ 272
Query: 308 WF 309
+
Sbjct: 273 FL 274
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 87/320 (27%), Positives = 138/320 (43%), Gaps = 66/320 (20%)
Query: 2 NMLQGCRSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPI 61
N Q + +FE++ + G++G V + ++G A+K + K +E+
Sbjct: 32 NPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEH---- 87
Query: 62 SSLREINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKC 121
+L E IL + + P +V + E D+ ++YMVMEY + FS +
Sbjct: 88 -TLNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF 145
Query: 122 LMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYT-SLVVT 180
Q++ +YLH +++RDLK NL+++ QG +K+ DFG +++ +K T L T
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKR----VKGRTWXLCGT 201
Query: 181 LWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTET 240
Y APE++L +K Y+ AVD W++G ++ E+ A P F
Sbjct: 202 PEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF---------------------- 238
Query: 241 IWPGLSELPGAKANFAKQPYNLLRK------RFPAASFTGSPVLSESGFDLLNRLLTYDP 294
FA QP + K RFP+ S DLL LL D
Sbjct: 239 --------------FADQPIQIYEKIVSGKVRFPSH-------FSSDLKDLLRNLLQVDL 277
Query: 295 EKRI-----TVDDALNHYWF 309
KR V+D NH WF
Sbjct: 278 TKRFGNLKNGVNDIKNHKWF 297
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 138/317 (43%), Gaps = 66/317 (20%)
Query: 5 QGCRSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSL 64
Q + +FE++ + G++G V + K++G A+K + K +E+ +L
Sbjct: 28 QNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEH-----TL 82
Query: 65 REINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLML 124
E IL + + P +V + E D+ ++YMVMEY+ + F +
Sbjct: 83 NEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAA 141
Query: 125 QLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYT-SLVVTLWY 183
Q++ +YLH +++RDLK NLL++ QG +++ DFG +++ +K T L T Y
Sbjct: 142 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR----VKGRTWXLCGTPEY 197
Query: 184 RAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWP 243
APE++L +K Y+ AVD W++G ++ E+ A P F
Sbjct: 198 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF------------------------- 231
Query: 244 GLSELPGAKANFAKQPYNLLRK------RFPAASFTGSPVLSESGFDLLNRLLTYDPEKR 297
FA QP + K RFP+ S DLL LL D KR
Sbjct: 232 -----------FADQPIQIYEKIVSGKVRFPSH-------FSSDLKDLLRNLLQVDLTKR 273
Query: 298 I-----TVDDALNHYWF 309
V+D NH WF
Sbjct: 274 FGNLKNGVNDIKNHKWF 290
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 91.3 bits (225), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 114/209 (54%), Gaps = 14/209 (6%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
+E + ++ +G +G VY+A++K++G + A K ++ + E+ LE + EI IL +
Sbjct: 13 WEIVGELGDGAFGKVYKAKNKETGALAAAKVIET---KSEEELE-----DYIVEIEILAT 64
Query: 73 FDHPSIVNVKEVVMDDHDSVYMVMEYMEHD-LKWLMESMKQPFSTSEVKCLMLQLLEGVK 131
DHP IV + D +++++E+ + +M + + + +++ + Q+LE +
Sbjct: 65 CDHPYIVKLLGAYYHD-GKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALN 123
Query: 132 YLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLG 191
+LH ++HRDLK N+L+ +G +++ DFG+S + L+ S + T ++ APE+++
Sbjct: 124 FLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMC 183
Query: 192 A----KKYSTAVDMWSVGCIMAELLAKKP 216
Y D+WS+G + E+ +P
Sbjct: 184 ETMKDTPYDYKADIWSLGITLIEMAQIEP 212
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 138/317 (43%), Gaps = 66/317 (20%)
Query: 5 QGCRSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSL 64
Q + +F+++ + G++G V + K+SG A+K + K +E+ +L
Sbjct: 35 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEH-----TL 89
Query: 65 REINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLML 124
E IL + + P +V + E D+ ++YMVMEY+ + FS +
Sbjct: 90 NEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 125 QLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYT-SLVVTLWY 183
Q++ +YLH +++RDLK NLL++ QG +++ DFG +++ +K T L T Y
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR----VKGRTWXLCGTPEY 204
Query: 184 RAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWP 243
AP ++L +K Y+ AVD W++G ++ E+ A P F
Sbjct: 205 LAPAIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF------------------------- 238
Query: 244 GLSELPGAKANFAKQPYNLLRK------RFPAASFTGSPVLSESGFDLLNRLLTYDPEKR 297
FA QP + K RFP+ S DLL LL D KR
Sbjct: 239 -----------FADQPIQIYEKIVSGKVRFPSH-------FSSDLKDLLRNLLQVDLTKR 280
Query: 298 I-----TVDDALNHYWF 309
V+D NH WF
Sbjct: 281 FGNLKNGVNDIKNHKWF 297
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 114/209 (54%), Gaps = 14/209 (6%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
+E + ++ +G +G VY+A++K++G + A K ++ + E+ LE + EI IL +
Sbjct: 21 WEIVGELGDGAFGKVYKAKNKETGALAAAKVIET---KSEEELE-----DYIVEIEILAT 72
Query: 73 FDHPSIVNVKEVVMDDHDSVYMVMEYMEHD-LKWLMESMKQPFSTSEVKCLMLQLLEGVK 131
DHP IV + D +++++E+ + +M + + + +++ + Q+LE +
Sbjct: 73 CDHPYIVKLLGAYYHD-GKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALN 131
Query: 132 YLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLG 191
+LH ++HRDLK N+L+ +G +++ DFG+S + L+ S + T ++ APE+++
Sbjct: 132 FLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMC 191
Query: 192 A----KKYSTAVDMWSVGCIMAELLAKKP 216
Y D+WS+G + E+ +P
Sbjct: 192 ETMKDTPYDYKADIWSLGITLIEMAQIEP 220
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 109/244 (44%), Gaps = 39/244 (15%)
Query: 66 EINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQ 125
EI+I S H +V +D+D V++V+E + ++ + E + + Q
Sbjct: 91 EISIHRSLAHQHVVGFHGF-FEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQ 149
Query: 126 LLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRA 185
++ G +YLH N V+HRDLK NL LN +KI DFG++ + + L T Y A
Sbjct: 150 IVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIA 209
Query: 186 PELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGL 245
PE +L K +S VD+WS+GCIM LL KP P ET
Sbjct: 210 PE-VLSKKGHSFEVDVWSIGCIMYTLLVGKP--------------------PFET----- 243
Query: 246 SELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALN 305
S L K Y++ + P A+ L+ ++L DP R T+++ LN
Sbjct: 244 SCLKETYLRIKKNEYSIPKHINPVAA------------SLIQKMLQTDPTARPTINELLN 291
Query: 306 HYWF 309
+F
Sbjct: 292 DEFF 295
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 109/244 (44%), Gaps = 39/244 (15%)
Query: 66 EINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQ 125
EI+I S H +V +D+D V++V+E + ++ + E + + Q
Sbjct: 89 EISIHRSLAHQHVVGFHGF-FEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQ 147
Query: 126 LLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRA 185
++ G +YLH N V+HRDLK NL LN +KI DFG++ + + L T Y A
Sbjct: 148 IVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIA 207
Query: 186 PELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGL 245
PE +L K +S VD+WS+GCIM LL KP P ET
Sbjct: 208 PE-VLSKKGHSFEVDVWSIGCIMYTLLVGKP--------------------PFET----- 241
Query: 246 SELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALN 305
S L K Y++ + P A+ L+ ++L DP R T+++ LN
Sbjct: 242 SCLKETYLRIKKNEYSIPKHINPVAA------------SLIQKMLQTDPTARPTINELLN 289
Query: 306 HYWF 309
+F
Sbjct: 290 DEFF 293
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 90.9 bits (224), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 121/233 (51%), Gaps = 15/233 (6%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINIL-L 71
FE + + +G++G V AR K++G++ A+K +K +V ++D +E ++ E IL L
Sbjct: 25 FEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVE-----CTMTEKRILSL 79
Query: 72 SFDHPSIVNVKEVVMDDHDSVYMVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEGV 130
+ +HP + + D ++ VME++ DL + ++ ++ F + + +++ +
Sbjct: 80 ARNHPFLTQLF-CCFQTPDRLFFVMEFVNGGDLMFHIQKSRR-FDEARARFYAAEIISAL 137
Query: 131 KYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLL 190
+LHD +++RDLK N+LL+++G K+ DFGM ++ + T Y APE +L
Sbjct: 138 MFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPE-IL 196
Query: 191 GAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWP 243
Y AVD W++G ++ E+L F E D + I E ++P
Sbjct: 197 QEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILN-----DEVVYP 244
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 90.9 bits (224), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 131/320 (40%), Gaps = 66/320 (20%)
Query: 16 LNKISEGTYGIVYRARDKKSGEIVALK---KVKMNVGRKEDCLEYGFPISSLREINILLS 72
L I +G + V AR +G+ VA+K K ++N + RE+ I+
Sbjct: 19 LKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLF---------REVRIMKV 69
Query: 73 FDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKY 132
+HP+IV + EV+ + ++Y+VMEY + E + Q++ V+Y
Sbjct: 70 LNHPNIVKLFEVI-ETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQY 128
Query: 133 LHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQ--YGSPLKPYTSLVVTLWYRAPELLL 190
H +++HRDLK NLLL+ +KI DFG S + +G+ L + + Y APEL
Sbjct: 129 CHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCG---SPPYAAPELFQ 185
Query: 191 GAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPG 250
G K VD+WS+G I+ L++ F G
Sbjct: 186 GKKYDGPEVDVWSLGVILYTLVSGSLPFDG------------------------------ 215
Query: 251 AKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWF- 309
Q LR+R + +S +LL + L +P KR T++ + W
Sbjct: 216 -------QNLKELRERVLRGKYRIPFYMSTDCENLLKKFLILNPSKRGTLEQIMKDRWMN 268
Query: 310 --HE--------VPLPKSKD 319
HE PLP KD
Sbjct: 269 VGHEDDELKPYVEPLPDYKD 288
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 130/320 (40%), Gaps = 66/320 (20%)
Query: 16 LNKISEGTYGIVYRARDKKSGEIVALK---KVKMNVGRKEDCLEYGFPISSLREINILLS 72
L I +G + V AR +G+ VA+K K ++N + RE+ I+
Sbjct: 19 LKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLF---------REVRIMKV 69
Query: 73 FDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKY 132
+HP+IV + EV+ + ++Y+VMEY + E + Q++ V+Y
Sbjct: 70 LNHPNIVKLFEVI-ETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQY 128
Query: 133 LHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQ--YGSPLKPYTSLVVTLWYRAPELLL 190
H +++HRDLK NLLL+ +KI DFG S + +G+ L + Y APEL
Sbjct: 129 CHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDAFCG---APPYAAPELFQ 185
Query: 191 GAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPG 250
G K VD+WS+G I+ L++ F G
Sbjct: 186 GKKYDGPEVDVWSLGVILYTLVSGSLPFDG------------------------------ 215
Query: 251 AKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWF- 309
Q LR+R + +S +LL + L +P KR T++ + W
Sbjct: 216 -------QNLKELRERVLRGKYRIPFYMSTDCENLLKKFLILNPSKRGTLEQIMKDRWMN 268
Query: 310 --HE--------VPLPKSKD 319
HE PLP KD
Sbjct: 269 VGHEDDELKPYVEPLPDYKD 288
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 117/227 (51%), Gaps = 12/227 (5%)
Query: 5 QGCRSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSL 64
Q + +F+++ + G++G V + K+SG A+K + K +E+ +L
Sbjct: 35 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEH-----TL 89
Query: 65 REINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLML 124
E IL + + P +V + E D+ ++YMVMEY+ + FS +
Sbjct: 90 NEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 125 QLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYT-SLVVTLWY 183
Q++ +YLH +++RDLK NLL++ QG +++ DFG +++ +K T L T Y
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR----VKGRTWXLCGTPEY 204
Query: 184 RAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKI 230
APE++L +K Y+ AVD W++G ++ E+ A P F + +KI
Sbjct: 205 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 250
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 114/214 (53%), Gaps = 10/214 (4%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
++ ++K+ G VY A D VA+K + + KE+ L+ F RE++
Sbjct: 13 YKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKR-FE----REVHNSSQ 67
Query: 73 FDHPSIVNVKEVVMDDHDSVYMVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEGVK 131
H +IV++ +V +D D Y+VMEY+E L +ES P S Q+L+G+K
Sbjct: 68 LSHQNIVSMIDVDEED-DCYYLVMEYIEGPTLSEYIES-HGPLSVDTAINFTNQILDGIK 125
Query: 132 YLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYG-SPLKPYTSLVVTLWYRAPELLL 190
+ HD ++HRD+K N+L+++ LKI DFG+++ + L ++ T+ Y +PE
Sbjct: 126 HAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAK 185
Query: 191 GAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEV 224
G + D++S+G ++ E+L +P F+G T V
Sbjct: 186 G-EATDECTDIYSIGIVLYEMLVGEPPFNGETAV 218
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 123/255 (48%), Gaps = 15/255 (5%)
Query: 13 FEKLNKISEGTYGIVYRARD---KKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINI 69
FE L + +G++G V+ R SG + A+K +K + D + + E +I
Sbjct: 30 FELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDR------VRTKMERDI 83
Query: 70 LLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEG 129
L +HP +V + +Y++++++ + S + F+ +VK + +L G
Sbjct: 84 LADVNHPFVVKL-HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALG 142
Query: 130 VKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELL 189
+ +LH +++RDLK N+LL+ +G +K+ DFG+S++ K S T+ Y APE +
Sbjct: 143 LDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPE-V 201
Query: 190 LGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKT-LGTPTETIWPGLSEL 248
+ + +S + D WS G +M E+L F G + + I K LG P S L
Sbjct: 202 VNRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKAKLGMPQFLSTEAQSLL 261
Query: 249 PGAKANFAKQPYNLL 263
+A F + P N L
Sbjct: 262 ---RALFKRNPANRL 273
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 137/317 (43%), Gaps = 66/317 (20%)
Query: 5 QGCRSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSL 64
Q + +FE++ + G++G V + K++G A+K + K +E+ +L
Sbjct: 36 QNTAHLDQFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEH-----TL 90
Query: 65 REINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLML 124
E I + + P +V + E D+ ++YMV+EY + FS +
Sbjct: 91 NEKRIQQAVNFPFLVKL-EFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAA 149
Query: 125 QLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYT-SLVVTLWY 183
Q++ +YLH +++RDLK NLL++ QG +K+ DFG +++ +K T L T Y
Sbjct: 150 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKR----VKGRTWXLCGTPEY 205
Query: 184 RAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWP 243
APE++L +K Y+ AVD W++G ++ E+ A P F
Sbjct: 206 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF------------------------- 239
Query: 244 GLSELPGAKANFAKQPYNLLRK------RFPAASFTGSPVLSESGFDLLNRLLTYDPEKR 297
FA QP + K RFP+ S DLL LL D KR
Sbjct: 240 -----------FADQPIQIYEKIVSGKVRFPSH-------FSSDLKDLLRNLLQVDLTKR 281
Query: 298 I-----TVDDALNHYWF 309
V+D NH WF
Sbjct: 282 FGNLKNGVNDIKNHKWF 298
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 107/213 (50%), Gaps = 8/213 (3%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILL 71
+F+ L + +GT+G V R+K +G A+K ++ V +D + + ++ E +L
Sbjct: 6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAH-----TVTESRVLQ 60
Query: 72 SFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVK 131
+ HP + +K HD + VMEY + S ++ F+ + +++ ++
Sbjct: 61 NTRHPFLTALK-YAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALE 119
Query: 132 YLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLG 191
YLH V++RD+K NL+L+ G +KI DFG+ ++ S + T Y APE +L
Sbjct: 120 YLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPE-VLE 178
Query: 192 AKKYSTAVDMWSVGCIMAELLAKK-PLFSGTTE 223
Y AVD W +G +M E++ + P ++ E
Sbjct: 179 DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE 211
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/320 (26%), Positives = 139/320 (43%), Gaps = 66/320 (20%)
Query: 2 NMLQGCRSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPI 61
N Q + +FE++ + G++G V + ++G A+K + K +E+
Sbjct: 32 NPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEH---- 87
Query: 62 SSLREINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKC 121
+L E IL + + P +V + E D+ ++YMVMEY + FS +
Sbjct: 88 -TLNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF 145
Query: 122 LMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYT-SLVVT 180
Q++ +YLH +++RDLK NL+++ QG +++ DFG++++ +K T L T
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGLAKR----VKGRTWXLCGT 201
Query: 181 LWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTET 240
Y APE++L +K Y+ AVD W++G ++ E+ A P F
Sbjct: 202 PEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF---------------------- 238
Query: 241 IWPGLSELPGAKANFAKQPYNLLRK------RFPAASFTGSPVLSESGFDLLNRLLTYDP 294
FA QP + K RFP+ S DLL LL D
Sbjct: 239 --------------FADQPIQIYEKIVSGKVRFPSH-------FSSDLKDLLRNLLQVDL 277
Query: 295 EKRI-----TVDDALNHYWF 309
KR V+D NH WF
Sbjct: 278 TKRFGNLKNGVNDIKNHKWF 297
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/320 (26%), Positives = 138/320 (43%), Gaps = 66/320 (20%)
Query: 2 NMLQGCRSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPI 61
N Q + +FE++ + G++G V + ++G A+K + K +E+
Sbjct: 32 NPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEH---- 87
Query: 62 SSLREINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKC 121
+L E IL + + P +V + E D+ ++YMVMEY + FS +
Sbjct: 88 -TLNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF 145
Query: 122 LMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYT-SLVVT 180
Q++ +YLH +++RDLK NL+++ QG +++ DFG +++ +K T L T
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGFAKR----VKGRTWXLCGT 201
Query: 181 LWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTET 240
Y APE++L +K Y+ AVD W++G ++ E+ A P F
Sbjct: 202 PEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF---------------------- 238
Query: 241 IWPGLSELPGAKANFAKQPYNLLRK------RFPAASFTGSPVLSESGFDLLNRLLTYDP 294
FA QP + K RFP+ S DLL LL D
Sbjct: 239 --------------FADQPIQIYEKIVSGKVRFPSH-------FSSDLKDLLRNLLQVDL 277
Query: 295 EKRI-----TVDDALNHYWF 309
KR V+D NH WF
Sbjct: 278 TKRFGNLKNGVNDIKNHKWF 297
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 138/317 (43%), Gaps = 66/317 (20%)
Query: 5 QGCRSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSL 64
Q + +F+++ + G++G V + K+SG A+K + K +E+ +L
Sbjct: 35 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEH-----TL 89
Query: 65 REINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLML 124
E IL + + P +V + E D+ ++YMVMEY+ + FS +
Sbjct: 90 NEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 125 QLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYT-SLVVTLWY 183
Q++ +YLH +++RDLK NLL++ QG +++ DFG +++ +K T L T
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR----VKGRTWXLCGTPEA 204
Query: 184 RAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWP 243
APE++L +K Y+ AVD W++G ++ E+ A P F
Sbjct: 205 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF------------------------- 238
Query: 244 GLSELPGAKANFAKQPYNLLRK------RFPAASFTGSPVLSESGFDLLNRLLTYDPEKR 297
FA QP + K RFP+ S DLL LL D KR
Sbjct: 239 -----------FADQPIQIYEKIVSGKVRFPSH-------FSSDLKDLLRNLLQVDLTKR 280
Query: 298 I-----TVDDALNHYWF 309
V+D NH WF
Sbjct: 281 FGNLKNGVNDIKNHKWF 297
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 107/213 (50%), Gaps = 8/213 (3%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILL 71
+F+ L + +GT+G V R+K +G A+K ++ V +D + + ++ E +L
Sbjct: 9 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAH-----TVTESRVLQ 63
Query: 72 SFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVK 131
+ HP + +K HD + VMEY + S ++ F+ + +++ ++
Sbjct: 64 NTRHPFLTALK-YAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALE 122
Query: 132 YLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLG 191
YLH V++RD+K NL+L+ G +KI DFG+ ++ S + T Y APE +L
Sbjct: 123 YLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPE-VLE 181
Query: 192 AKKYSTAVDMWSVGCIMAELLAKK-PLFSGTTE 223
Y AVD W +G +M E++ + P ++ E
Sbjct: 182 DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE 214
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 105/213 (49%), Gaps = 8/213 (3%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILL 71
+F+ L + +GT+G V R+K +G A+K + RKE + ++ E +L
Sbjct: 6 DFDYLKLLGKGTFGKVILVREKATGRYYAMK-----ILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 72 SFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVK 131
+ HP + +K HD + VMEY + S ++ F+ + +++ ++
Sbjct: 61 NTRHPFLTALK-YAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALE 119
Query: 132 YLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLG 191
YLH V++RD+K NL+L+ G +KI DFG+ ++ S + T Y APE +L
Sbjct: 120 YLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPE-VLE 178
Query: 192 AKKYSTAVDMWSVGCIMAELLAKK-PLFSGTTE 223
Y AVD W +G +M E++ + P ++ E
Sbjct: 179 DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE 211
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 131/320 (40%), Gaps = 66/320 (20%)
Query: 16 LNKISEGTYGIVYRARDKKSGEIVALK---KVKMNVGRKEDCLEYGFPISSLREINILLS 72
L I +G + V AR +G+ VA++ K ++N + RE+ I+
Sbjct: 19 LKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLF---------REVRIMKV 69
Query: 73 FDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKY 132
+HP+IV + EV+ + ++Y+VMEY + E + Q++ V+Y
Sbjct: 70 LNHPNIVKLFEVI-ETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQY 128
Query: 133 LHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQ--YGSPLKPYTSLVVTLWYRAPELLL 190
H +++HRDLK NLLL+ +KI DFG S + +G+ L + + Y APEL
Sbjct: 129 CHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDEFCG---SPPYAAPELFQ 185
Query: 191 GAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPG 250
G K VD+WS+G I+ L++ F G
Sbjct: 186 GKKYDGPEVDVWSLGVILYTLVSGSLPFDG------------------------------ 215
Query: 251 AKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWF- 309
Q LR+R + +S +LL + L +P KR T++ + W
Sbjct: 216 -------QNLKELRERVLRGKYRIPFYMSTDCENLLKKFLILNPSKRGTLEQIMKDRWMN 268
Query: 310 --HE--------VPLPKSKD 319
HE PLP KD
Sbjct: 269 VGHEDDELKPYVEPLPDYKD 288
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 135/301 (44%), Gaps = 44/301 (14%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSL-REINILL 71
+E ++ G + IV + R K +G+ A K +K R+ G + RE+NIL
Sbjct: 14 YEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKK---RRLSSSRRGVSREEIEREVNILR 70
Query: 72 SFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVK 131
HP+I+ + ++ + D V +++E + + + K+ + E + Q+L+GV
Sbjct: 71 EIRHPNIITLHDIFENKTD-VVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVH 129
Query: 132 YLHDNWVLHRDLKTSNLLLNNQGV----LKICDFGMSRQYGSPLKPYTSLVVTLWYRAPE 187
YLH + H DLK N++L ++ V +K+ DFG++ + + + ++ T + APE
Sbjct: 130 YLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAG-NEFKNIFGTPEFVAPE 188
Query: 188 LLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSE 247
++ + DMWS+G I LL+ F G T+ + +
Sbjct: 189 -IVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETL-------------------- 227
Query: 248 LPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHY 307
N + Y+ F F+ + SE D + RLL DP++R+ + +L H
Sbjct: 228 -----TNISAVNYD-----FDEEYFSNT---SELAKDFIRRLLVKDPKRRMXIAQSLEHS 274
Query: 308 W 308
W
Sbjct: 275 W 275
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 131/320 (40%), Gaps = 66/320 (20%)
Query: 16 LNKISEGTYGIVYRARDKKSGEIVALK---KVKMNVGRKEDCLEYGFPISSLREINILLS 72
L I +G + V AR +G+ VA++ K ++N + RE+ I+
Sbjct: 19 LKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLF---------REVRIMKV 69
Query: 73 FDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKY 132
+HP+IV + EV+ + ++Y+VMEY + E + Q++ V+Y
Sbjct: 70 LNHPNIVKLFEVI-ETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQY 128
Query: 133 LHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQ--YGSPLKPYTSLVVTLWYRAPELLL 190
H +++HRDLK NLLL+ +KI DFG S + +G+ L + + Y APEL
Sbjct: 129 CHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCG---SPPYAAPELFQ 185
Query: 191 GAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPG 250
G K VD+WS+G I+ L++ F G
Sbjct: 186 GKKYDGPEVDVWSLGVILYTLVSGSLPFDG------------------------------ 215
Query: 251 AKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWF- 309
Q LR+R + +S +LL + L +P KR T++ + W
Sbjct: 216 -------QNLKELRERVLRGKYRIPFYMSTDCENLLKKFLILNPSKRGTLEQIMKDRWMN 268
Query: 310 --HE--------VPLPKSKD 319
HE PLP KD
Sbjct: 269 VGHEDDELKPYVEPLPDYKD 288
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/320 (26%), Positives = 138/320 (43%), Gaps = 66/320 (20%)
Query: 2 NMLQGCRSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPI 61
N Q + +FE++ + G++G V + ++G A+K + K +E+
Sbjct: 33 NPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEH---- 88
Query: 62 SSLREINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKC 121
+L E IL + + P +V + E D+ ++YMVMEY+ + F +
Sbjct: 89 -TLNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF 146
Query: 122 LMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYT-SLVVT 180
Q++ +YLH +++RDLK NLL++ QG +++ DFG +++ +K T L T
Sbjct: 147 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR----VKGRTWXLCGT 202
Query: 181 LWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTET 240
Y APE++L +K Y+ AVD W++G ++ E+ A P F
Sbjct: 203 PEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF---------------------- 239
Query: 241 IWPGLSELPGAKANFAKQPYNLLRK------RFPAASFTGSPVLSESGFDLLNRLLTYDP 294
FA QP + K RFP+ S DLL LL D
Sbjct: 240 --------------FADQPIQIYEKIVSGKVRFPSH-------FSSDLKDLLRNLLQVDL 278
Query: 295 EKRI-----TVDDALNHYWF 309
KR V+D NH WF
Sbjct: 279 TKRFGNLKNGVNDIKNHKWF 298
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/320 (26%), Positives = 137/320 (42%), Gaps = 66/320 (20%)
Query: 2 NMLQGCRSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPI 61
N Q + +FE++ + G++G V + ++G A+K + K +E+
Sbjct: 33 NPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEH---- 88
Query: 62 SSLREINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKC 121
+L E IL + + P + + E D+ ++YMVMEY + FS +
Sbjct: 89 -TLNEKRILQAVNFPFLTKL-EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF 146
Query: 122 LMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYT-SLVVT 180
Q++ +YLH +++RDLK NL+++ QG +K+ DFG +++ +K T L T
Sbjct: 147 YAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKR----VKGRTWXLCGT 202
Query: 181 LWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTET 240
Y APE++L +K Y+ AVD W++G ++ E+ A P F
Sbjct: 203 PEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF---------------------- 239
Query: 241 IWPGLSELPGAKANFAKQPYNLLRK------RFPAASFTGSPVLSESGFDLLNRLLTYDP 294
FA QP + K RFP+ S DLL LL D
Sbjct: 240 --------------FADQPIQIYEKIVSGKVRFPSH-------FSSDLKDLLRNLLQVDL 278
Query: 295 EKRI-----TVDDALNHYWF 309
KR V+D NH WF
Sbjct: 279 TKRFGNLKNGVNDIKNHKWF 298
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/320 (26%), Positives = 137/320 (42%), Gaps = 66/320 (20%)
Query: 2 NMLQGCRSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPI 61
N Q + +FE++ + G++G V + ++G A+K + K +E+
Sbjct: 33 NPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEH---- 88
Query: 62 SSLREINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKC 121
+L E IL + + P + + E D+ ++YMVMEY + FS +
Sbjct: 89 -TLNEKRILQAVNFPFLTKL-EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF 146
Query: 122 LMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYT-SLVVT 180
Q++ +YLH +++RDLK NL+++ QG +K+ DFG +++ +K T L T
Sbjct: 147 YAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKR----VKGRTWXLCGT 202
Query: 181 LWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTET 240
Y APE++L +K Y+ AVD W++G ++ E+ A P F
Sbjct: 203 PEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF---------------------- 239
Query: 241 IWPGLSELPGAKANFAKQPYNLLRK------RFPAASFTGSPVLSESGFDLLNRLLTYDP 294
FA QP + K RFP+ S DLL LL D
Sbjct: 240 --------------FADQPIQIYEKIVSGKVRFPSH-------FSSDLKDLLRNLLQVDL 278
Query: 295 EKRI-----TVDDALNHYWF 309
KR V+D NH WF
Sbjct: 279 TKRFGNLKNGVNDIKNHKWF 298
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/320 (26%), Positives = 138/320 (43%), Gaps = 66/320 (20%)
Query: 2 NMLQGCRSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPI 61
N Q + +FE++ + G++G V + ++G A+K + K +E+
Sbjct: 32 NPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEH---- 87
Query: 62 SSLREINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKC 121
+L E IL + + P +V + E D+ ++YMVMEY+ + F +
Sbjct: 88 -TLNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF 145
Query: 122 LMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYT-SLVVT 180
Q++ +YLH +++RDLK NLL++ QG +++ DFG +++ +K T L T
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR----VKGRTWXLCGT 201
Query: 181 LWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTET 240
Y APE++L +K Y+ AVD W++G ++ E+ A P F
Sbjct: 202 PEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF---------------------- 238
Query: 241 IWPGLSELPGAKANFAKQPYNLLRK------RFPAASFTGSPVLSESGFDLLNRLLTYDP 294
FA QP + K RFP+ S DLL LL D
Sbjct: 239 --------------FADQPIQIYEKIVSGKVRFPSH-------FSSDLKDLLRNLLQVDL 277
Query: 295 EKRI-----TVDDALNHYWF 309
KR V+D NH WF
Sbjct: 278 TKRFGNLKNGVNDIKNHKWF 297
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/297 (29%), Positives = 122/297 (41%), Gaps = 49/297 (16%)
Query: 22 GTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNV 81
GT+G V + + +G VA+K + R D + REI L F HP I+ +
Sbjct: 27 GTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVG-----KIRREIQNLKLFRHPHIIKL 81
Query: 82 KEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHR 141
+V+ D ++MVMEY+ + E + L Q+L GV Y H + V+HR
Sbjct: 82 YQVISTPSD-IFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVHR 140
Query: 142 DLKTSNLLLNNQGVLKICDFGMSRQY--GSPLKPYTSLVVTLWYRAPELLLGAKKYSTAV 199
DLK N+LL+ KI DFG+S G L+ + Y APE++ G V
Sbjct: 141 DLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSCG---SPNYAAPEVISGRLYAGPEV 197
Query: 200 DMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGAKANFAKQP 259
D+WS G I+ LL F D + +FK I G+
Sbjct: 198 DIWSSGVILYALLCGTLPFDD----DHVPTLFK-------KICDGI-------------- 232
Query: 260 YNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVPLPK 316
F L+ S LL +L DP KR T+ D H WF + LPK
Sbjct: 233 ------------FYTPQYLNPSVISLLKHMLQVDPMKRATIKDIREHEWFKQ-DLPK 276
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 137/305 (44%), Gaps = 44/305 (14%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSL-REINILL 71
+E ++ G + IV + R K +G+ A K +K R+ G + RE+NIL
Sbjct: 28 YEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKK---RRLXSSRRGVSREEIEREVNILR 84
Query: 72 SFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVK 131
HP+I+ + ++ + D V +++E + + + K+ + E + Q+L+GV
Sbjct: 85 EIRHPNIITLHDIFENKTD-VVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVH 143
Query: 132 YLHDNWVLHRDLKTSNLLLNNQGV----LKICDFGMSRQYGSPLKPYTSLVVTLWYRAPE 187
YLH + H DLK N++L ++ V +K+ DFG++ + + + ++ T + APE
Sbjct: 144 YLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAG-NEFKNIFGTPEFVAPE 202
Query: 188 LLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSE 247
++ + DMWS+G I LL+ F G T+ + +
Sbjct: 203 -IVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETL-------------------- 241
Query: 248 LPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHY 307
N + Y+ F F+ + L++ D + RLL DP++R+ + +L H
Sbjct: 242 -----TNISAVNYD-----FDEEYFSNTSELAK---DFIRRLLVKDPKRRMXIAQSLEHS 288
Query: 308 WFHEV 312
W +
Sbjct: 289 WIKAI 293
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/320 (26%), Positives = 138/320 (43%), Gaps = 66/320 (20%)
Query: 2 NMLQGCRSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPI 61
N Q + +FE++ + G++G V + ++G A+K + K +E+
Sbjct: 32 NPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEH---- 87
Query: 62 SSLREINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKC 121
+L E IL + + P +V + E D+ ++YMVMEY+ + F +
Sbjct: 88 -TLNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF 145
Query: 122 LMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYT-SLVVT 180
Q++ +YLH +++RDLK NLL++ QG +++ DFG +++ +K T L T
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR----VKGRTWXLCGT 201
Query: 181 LWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTET 240
Y APE++L +K Y+ AVD W++G ++ E+ A P F
Sbjct: 202 PEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF---------------------- 238
Query: 241 IWPGLSELPGAKANFAKQPYNLLRK------RFPAASFTGSPVLSESGFDLLNRLLTYDP 294
FA QP + K RFP+ S DLL LL D
Sbjct: 239 --------------FADQPIQIYEKIVSGKVRFPSH-------FSSDLKDLLRNLLQVDL 277
Query: 295 EKRI-----TVDDALNHYWF 309
KR V+D NH WF
Sbjct: 278 TKRFGNLKNGVNDIKNHKWF 297
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 131/320 (40%), Gaps = 66/320 (20%)
Query: 16 LNKISEGTYGIVYRARDKKSGEIVALK---KVKMNVGRKEDCLEYGFPISSLREINILLS 72
L I +G + V AR +G+ VA+K K ++N + RE+ I+
Sbjct: 12 LKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLF---------REVRIMKV 62
Query: 73 FDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKY 132
+HP+IV + EV+ + ++Y+VMEY + E + Q++ V+Y
Sbjct: 63 LNHPNIVKLFEVI-ETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAVQY 121
Query: 133 LHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQ--YGSPLKPYTSLVVTLWYRAPELLL 190
H +++HRDLK NLLL+ +KI DFG S + +G+ L + + Y APEL
Sbjct: 122 CHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCG---SPPYAAPELFQ 178
Query: 191 GAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPG 250
G K VD+WS+G I+ L++ F G
Sbjct: 179 GKKYDGPEVDVWSLGVILYTLVSGSLPFDG------------------------------ 208
Query: 251 AKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWF- 309
Q LR+R + +S +LL + L +P KR T++ + W
Sbjct: 209 -------QNLKELRERVLRGKYRIPFYMSTDCENLLKKFLILNPSKRGTLEQIMKDRWMN 261
Query: 310 --HE--------VPLPKSKD 319
HE PLP KD
Sbjct: 262 VGHEDDELKPYVEPLPDYKD 281
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/320 (26%), Positives = 137/320 (42%), Gaps = 66/320 (20%)
Query: 2 NMLQGCRSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPI 61
N Q + +FE++ + G++G V + ++G A+K + K +E+
Sbjct: 32 NPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEH---- 87
Query: 62 SSLREINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKC 121
+L E IL + + P +V + E D+ ++YMVMEY + F +
Sbjct: 88 -TLNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARF 145
Query: 122 LMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYT-SLVVT 180
Q++ +YLH +++RDLK NL+++ QG +K+ DFG +++ +K T L T
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKR----VKGRTWXLCGT 201
Query: 181 LWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTET 240
Y APE++L +K Y+ AVD W++G ++ E+ A P F
Sbjct: 202 PEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF---------------------- 238
Query: 241 IWPGLSELPGAKANFAKQPYNLLRK------RFPAASFTGSPVLSESGFDLLNRLLTYDP 294
FA QP + K RFP+ S DLL LL D
Sbjct: 239 --------------FADQPIQIYEKIVSGKVRFPSH-------FSSDLKDLLRNLLQVDL 277
Query: 295 EKRI-----TVDDALNHYWF 309
KR V+D NH WF
Sbjct: 278 TKRFGNLKNGVNDIKNHKWF 297
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 105/205 (51%), Gaps = 12/205 (5%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
F KL KI +G++G V++ D ++ ++VA+K + + E +EI +L
Sbjct: 29 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIE-------DIQQEITVLSQ 81
Query: 73 FDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKW-LMESMKQPFSTSEVKCLMLQLLEGVK 131
D P + + D ++++MEY+ L+E P +++ ++ ++L+G+
Sbjct: 82 CDSPYVTKYYGSYLKD-TKLWIIMEYLGGGSALDLLEP--GPLDETQIATILREILKGLD 138
Query: 132 YLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLG 191
YLH +HRD+K +N+LL+ G +K+ DFG++ Q + V T ++ APE ++
Sbjct: 139 YLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPE-VIK 197
Query: 192 AKKYSTAVDMWSVGCIMAELLAKKP 216
Y + D+WS+G EL +P
Sbjct: 198 QSAYDSKADIWSLGITAIELARGEP 222
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 106/213 (49%), Gaps = 8/213 (3%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILL 71
+F+ L + +GT+G V R+K +G A+K ++ V +D + + ++ E +L
Sbjct: 6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAH-----TVTESRVLQ 60
Query: 72 SFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVK 131
+ HP + +K HD + VMEY + S ++ F+ + +++ ++
Sbjct: 61 NTRHPFLTALK-YAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALE 119
Query: 132 YLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLG 191
YLH V++RD+K NL+L+ G +KI DFG+ ++ S T Y APE +L
Sbjct: 120 YLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPE-VLE 178
Query: 192 AKKYSTAVDMWSVGCIMAELLAKK-PLFSGTTE 223
Y AVD W +G +M E++ + P ++ E
Sbjct: 179 DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE 211
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 105/205 (51%), Gaps = 12/205 (5%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
F KL KI +G++G V++ D ++ ++VA+K + + E +EI +L
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIE-------DIQQEITVLSQ 61
Query: 73 FDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKW-LMESMKQPFSTSEVKCLMLQLLEGVK 131
D P + + D ++++MEY+ L+E P +++ ++ ++L+G+
Sbjct: 62 CDSPYVTKYYGSYLKD-TKLWIIMEYLGGGSALDLLEP--GPLDETQIATILREILKGLD 118
Query: 132 YLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLG 191
YLH +HRD+K +N+LL+ G +K+ DFG++ Q + V T ++ APE ++
Sbjct: 119 YLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPE-VIK 177
Query: 192 AKKYSTAVDMWSVGCIMAELLAKKP 216
Y + D+WS+G EL +P
Sbjct: 178 QSAYDSKADIWSLGITAIELARGEP 202
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 101/210 (48%), Gaps = 24/210 (11%)
Query: 19 ISEGTYGIVYRARDKKSGEIVALK---KVKMNVGRKEDCLEYGFPISS---LREINILLS 72
I +G + V AR +G VA+K K ++N P S RE+ I+
Sbjct: 23 IGKGNFAKVKLARHVLTGREVAVKIIDKTQLN------------PTSLQKLFREVRIMKI 70
Query: 73 FDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKY 132
+HP+IV + EV+ + ++Y+VMEY + E + Q++ V+Y
Sbjct: 71 LNHPNIVKLFEVI-ETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQY 129
Query: 133 LHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQY--GSPLKPYTSLVVTLWYRAPELLL 190
H +++HRDLK NLLL+ +KI DFG S ++ G+ L + + Y APEL
Sbjct: 130 CHQKYIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDTFCG---SPPYAAPELFQ 186
Query: 191 GAKKYSTAVDMWSVGCIMAELLAKKPLFSG 220
G K VD+WS+G I+ L++ F G
Sbjct: 187 GKKYDGPEVDVWSLGVILYTLVSGSLPFDG 216
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 106/213 (49%), Gaps = 8/213 (3%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILL 71
+F+ L + +GT+G V R+K +G A+K ++ V +D + + ++ E +L
Sbjct: 6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAH-----TVTESRVLQ 60
Query: 72 SFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVK 131
+ HP + +K HD + VMEY + S ++ F+ + +++ ++
Sbjct: 61 NTRHPFLTALK-YAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALE 119
Query: 132 YLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLG 191
YLH V++RD+K NL+L+ G +KI DFG+ ++ S T Y APE +L
Sbjct: 120 YLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPE-VLE 178
Query: 192 AKKYSTAVDMWSVGCIMAELLAKK-PLFSGTTE 223
Y AVD W +G +M E++ + P ++ E
Sbjct: 179 DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE 211
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 124/246 (50%), Gaps = 23/246 (9%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILL 71
EFE L + +GT+G V ++K +G A+K +K V +D + + +L E +L
Sbjct: 10 EFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAH-----TLTENRVLQ 64
Query: 72 SFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVK 131
+ HP + +K HD + VMEY + S ++ FS + +++ +
Sbjct: 65 NSRHPFLTALK-YSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALD 123
Query: 132 YLH-DNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQY---GSPLKPYTSLVVTLWYRAPE 187
YLH + V++RDLK NL+L+ G +KI DFG+ ++ G+ +K + T Y APE
Sbjct: 124 YLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCG---TPEYLAPE 180
Query: 188 LLLGAKKYSTAVDMWSVGCIMAELLAKK-PLFSGTTE-------VDQIDKIFKTLGTPTE 239
+L Y AVD W +G +M E++ + P ++ E +++I + +TLG +
Sbjct: 181 -VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEI-RFPRTLGPEAK 238
Query: 240 TIWPGL 245
++ GL
Sbjct: 239 SLLSGL 244
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 124/246 (50%), Gaps = 23/246 (9%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILL 71
EFE L + +GT+G V ++K +G A+K +K V +D + + +L E +L
Sbjct: 11 EFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAH-----TLTENRVLQ 65
Query: 72 SFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVK 131
+ HP + +K HD + VMEY + S ++ FS + +++ +
Sbjct: 66 NSRHPFLTALK-YSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALD 124
Query: 132 YLH-DNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQY---GSPLKPYTSLVVTLWYRAPE 187
YLH + V++RDLK NL+L+ G +KI DFG+ ++ G+ +K + T Y APE
Sbjct: 125 YLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCG---TPEYLAPE 181
Query: 188 LLLGAKKYSTAVDMWSVGCIMAELLAKK-PLFSGTTE-------VDQIDKIFKTLGTPTE 239
+L Y AVD W +G +M E++ + P ++ E +++I + +TLG +
Sbjct: 182 -VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEI-RFPRTLGPEAK 239
Query: 240 TIWPGL 245
++ GL
Sbjct: 240 SLLSGL 245
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 124/246 (50%), Gaps = 23/246 (9%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILL 71
EFE L + +GT+G V ++K +G A+K +K V +D + + +L E +L
Sbjct: 9 EFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAH-----TLTENRVLQ 63
Query: 72 SFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVK 131
+ HP + +K HD + VMEY + S ++ FS + +++ +
Sbjct: 64 NSRHPFLTALK-YSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALD 122
Query: 132 YLH-DNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQY---GSPLKPYTSLVVTLWYRAPE 187
YLH + V++RDLK NL+L+ G +KI DFG+ ++ G+ +K + T Y APE
Sbjct: 123 YLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCG---TPEYLAPE 179
Query: 188 LLLGAKKYSTAVDMWSVGCIMAELLAKK-PLFSGTTE-------VDQIDKIFKTLGTPTE 239
+L Y AVD W +G +M E++ + P ++ E +++I + +TLG +
Sbjct: 180 -VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEI-RFPRTLGPEAK 237
Query: 240 TIWPGL 245
++ GL
Sbjct: 238 SLLSGL 243
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 106/213 (49%), Gaps = 8/213 (3%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILL 71
+F+ L + +GT+G V R+K +G A+K ++ V +D + + ++ E +L
Sbjct: 11 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAH-----TVTESRVLQ 65
Query: 72 SFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVK 131
+ HP + +K HD + VMEY + S ++ F+ + +++ ++
Sbjct: 66 NTRHPFLTALK-YAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALE 124
Query: 132 YLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLG 191
YLH V++RD+K NL+L+ G +KI DFG+ ++ S T Y APE +L
Sbjct: 125 YLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPE-VLE 183
Query: 192 AKKYSTAVDMWSVGCIMAELLAKK-PLFSGTTE 223
Y AVD W +G +M E++ + P ++ E
Sbjct: 184 DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE 216
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 104/213 (48%), Gaps = 8/213 (3%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILL 71
+F+ L + +GT+G V R+K +G A+K + RKE + ++ E +L
Sbjct: 6 DFDYLKLLGKGTFGKVILVREKATGRYYAMK-----ILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 72 SFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVK 131
+ HP + +K HD + VMEY + S ++ F+ + +++ ++
Sbjct: 61 NTRHPFLTALK-YAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALE 119
Query: 132 YLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLG 191
YLH V++RD+K NL+L+ G +KI DFG+ ++ S T Y APE +L
Sbjct: 120 YLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPE-VLE 178
Query: 192 AKKYSTAVDMWSVGCIMAELLAKK-PLFSGTTE 223
Y AVD W +G +M E++ + P ++ E
Sbjct: 179 DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE 211
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 120/243 (49%), Gaps = 17/243 (6%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILL 71
EFE L + +GT+G V ++K +G A+K +K V +D + + +L E +L
Sbjct: 149 EFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAH-----TLTENRVLQ 203
Query: 72 SFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVK 131
+ HP + +K HD + VMEY + S ++ FS + +++ +
Sbjct: 204 NSRHPFLTALK-YSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALD 262
Query: 132 YLH-DNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLL 190
YLH + V++RDLK NL+L+ G +KI DFG+ ++ + T Y APE +L
Sbjct: 263 YLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPE-VL 321
Query: 191 GAKKYSTAVDMWSVGCIMAELLAKK-PLFSGTTE-------VDQIDKIFKTLGTPTETIW 242
Y AVD W +G +M E++ + P ++ E +++I + +TLG +++
Sbjct: 322 EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEI-RFPRTLGPEAKSLL 380
Query: 243 PGL 245
GL
Sbjct: 381 SGL 383
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 105/208 (50%), Gaps = 12/208 (5%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
F KL KI +G++G V++ D ++ ++VA+K + + E +EI +L
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIE-------DIQQEITVLSQ 76
Query: 73 FDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKW-LMESMKQPFSTSEVKCLMLQLLEGVK 131
D P + + D ++++MEY+ L+E P +++ ++ ++L+G+
Sbjct: 77 CDSPYVTKYYGSYLKD-TKLWIIMEYLGGGSALDLLEP--GPLDETQIATILREILKGLD 133
Query: 132 YLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLG 191
YLH +HRD+K +N+LL+ G +K+ DFG++ Q V T ++ APE ++
Sbjct: 134 YLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPE-VIK 192
Query: 192 AKKYSTAVDMWSVGCIMAELLAKKPLFS 219
Y + D+WS+G EL +P S
Sbjct: 193 QSAYDSKADIWSLGITAIELARGEPPHS 220
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 116/234 (49%), Gaps = 27/234 (11%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISS-----LRE 66
++E L I G+YG + R K G+I+ K+ L+YG + + E
Sbjct: 7 DYEVLYTIGTGSYGRCQKIRRKSDGKILVWKE-----------LDYGSMTEAEKQMLVSE 55
Query: 67 INILLSFDHPSIVNVKEVVMD-DHDSVYMVMEYMEH-DLKWLMES---MKQPFSTSEVKC 121
+N+L HP+IV + ++D + ++Y+VMEY E DL ++ +Q V
Sbjct: 56 VNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLR 115
Query: 122 LMLQLLEGVKYLH-----DNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTS 176
+M QL +K H + VLHRDLK +N+ L+ + +K+ DFG++R +
Sbjct: 116 VMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKT 175
Query: 177 LVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKI 230
V T +Y +PE + Y+ D+WS+GC++ EL A P F+ ++ + KI
Sbjct: 176 FVGTPYYMSPE-QMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKI 228
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 134/299 (44%), Gaps = 48/299 (16%)
Query: 18 KISEGTYGIVYRARDKKSG-EIVA--LKKVKMNVGRKEDCLEYGFPISSLREINILLSFD 74
++ G + IV + R+K +G E A +KK + R+ C E RE++IL
Sbjct: 19 ELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCRE-----EIEREVSILRQVL 73
Query: 75 HPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLH 134
HP+I+ + +V + D V +++E + + + K+ S E + Q+L+GV YLH
Sbjct: 74 HPNIITLHDVYENRTD-VVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLH 132
Query: 135 DNWVLHRDLKTSNLLLNNQGV----LKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLL 190
+ H DLK N++L ++ + +K+ DFG++ + ++ + ++ T + APE ++
Sbjct: 133 TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE-FKNIFGTPEFVAPE-IV 190
Query: 191 GAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPG 250
+ DMWS+G I LL+ F G T+ + +
Sbjct: 191 NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL----------------------- 227
Query: 251 AKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWF 309
AN Y+ + F SE D + +LL + KR+T+ +AL H W
Sbjct: 228 --ANITAVSYDFDEEFFSQT--------SELAKDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 104/205 (50%), Gaps = 12/205 (5%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
F KL KI +G++G V++ D ++ ++VA+K + + E +EI +L
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIE-------DIQQEITVLSQ 61
Query: 73 FDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKW-LMESMKQPFSTSEVKCLMLQLLEGVK 131
D P + + D ++++MEY+ L+E P +++ ++ ++L+G+
Sbjct: 62 CDSPYVTKYYGSYLKD-TKLWIIMEYLGGGSALDLLEP--GPLDETQIATILREILKGLD 118
Query: 132 YLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLG 191
YLH +HRD+K +N+LL+ G +K+ DFG++ Q V T ++ APE ++
Sbjct: 119 YLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPE-VIK 177
Query: 192 AKKYSTAVDMWSVGCIMAELLAKKP 216
Y + D+WS+G EL +P
Sbjct: 178 QSAYDSKADIWSLGITAIELARGEP 202
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 116/234 (49%), Gaps = 27/234 (11%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISS-----LRE 66
++E L I G+YG + R K G+I+ K+ L+YG + + E
Sbjct: 7 DYEVLYTIGTGSYGRCQKIRRKSDGKILVWKE-----------LDYGSMTEAEKQMLVSE 55
Query: 67 INILLSFDHPSIVNVKEVVMD-DHDSVYMVMEYMEH-DLKWLMES---MKQPFSTSEVKC 121
+N+L HP+IV + ++D + ++Y+VMEY E DL ++ +Q V
Sbjct: 56 VNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLR 115
Query: 122 LMLQLLEGVKYLH-----DNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTS 176
+M QL +K H + VLHRDLK +N+ L+ + +K+ DFG++R +
Sbjct: 116 VMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKA 175
Query: 177 LVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKI 230
V T +Y +PE + Y+ D+WS+GC++ EL A P F+ ++ + KI
Sbjct: 176 FVGTPYYMSPE-QMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKI 228
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 120/243 (49%), Gaps = 17/243 (6%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILL 71
EFE L + +GT+G V ++K +G A+K +K V +D + + +L E +L
Sbjct: 152 EFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAH-----TLTENRVLQ 206
Query: 72 SFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVK 131
+ HP + +K HD + VMEY + S ++ FS + +++ +
Sbjct: 207 NSRHPFLTALK-YSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALD 265
Query: 132 YLH-DNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLL 190
YLH + V++RDLK NL+L+ G +KI DFG+ ++ + T Y APE +L
Sbjct: 266 YLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPE-VL 324
Query: 191 GAKKYSTAVDMWSVGCIMAELLAKK-PLFSGTTE-------VDQIDKIFKTLGTPTETIW 242
Y AVD W +G +M E++ + P ++ E +++I + +TLG +++
Sbjct: 325 EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEI-RFPRTLGPEAKSLL 383
Query: 243 PGL 245
GL
Sbjct: 384 SGL 386
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 113/234 (48%), Gaps = 11/234 (4%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
FE L I +G++G V + + ++ A+K + K+ C+E + +E+ I+
Sbjct: 17 FEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMN-----KQKCVERNEVRNVFKELQIMQG 71
Query: 73 FDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKY 132
+HP +VN+ D+ D +V + DL++ ++ F VK + +L+ + Y
Sbjct: 72 LEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVH-FKEETVKLFICELVMALDY 130
Query: 133 LHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGA 192
L + ++HRD+K N+LL+ G + I DF ++ + T++ T Y APE+
Sbjct: 131 LQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQ-ITTMAGTKPYMAPEMFSSR 189
Query: 193 K--KYSTAVDMWSVGCIMAELL-AKKPL-FSGTTEVDQIDKIFKTLGTPTETIW 242
K YS AVD WS+G ELL ++P +T +I F+T + W
Sbjct: 190 KGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVVTYPSAW 243
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 132/309 (42%), Gaps = 50/309 (16%)
Query: 5 QGCRSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKV-KMNVGRKEDCLEYGFPISS 63
+ + +FEF++ + G + V A +K +G++ A+K + K + KE +E
Sbjct: 18 EDIKKIFEFKET--LGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIE------- 68
Query: 64 LREINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLM 123
EI +L H +IV + E + + + +Y+VM+ + + K ++ + L+
Sbjct: 69 -NEIAVLRKIKHENIVAL-EDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLI 126
Query: 124 LQLLEGVKYLHDNWVLHRDLKTSNLLLNNQ---GVLKICDFGMSRQYGSPLKPYTSLVVT 180
Q+L+ V YLH ++HRDLK NLL +Q + I DFG+S+ G ++ T
Sbjct: 127 RQVLDAVYYLHRMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKG-DVMSTACGT 185
Query: 181 LWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTET 240
Y APE +L K YS AVD WS+G I LL P F + ++I K
Sbjct: 186 PGYVAPE-VLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYEFDSP 244
Query: 241 IWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITV 300
W +S+S D + L+ DP KR T
Sbjct: 245 YWDD---------------------------------ISDSAKDFIRNLMEKDPNKRYTC 271
Query: 301 DDALNHYWF 309
+ A H W
Sbjct: 272 EQAARHPWI 280
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 121/272 (44%), Gaps = 58/272 (21%)
Query: 65 REINILLSFDHPSIVNVKEVVMDDH-DSVYMVMEYMEHDLKWLMESM-KQPFSTSEVKCL 122
+EI +L H +++ + +V+ ++ +YMVMEY ++ +++S+ ++ F +
Sbjct: 55 KEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGY 114
Query: 123 MLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVV--- 179
QL++G++YLH ++H+D+K NLLL G LKI G++ L P+ +
Sbjct: 115 FCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEA----LHPFAADDTCRT 170
Query: 180 ---TLWYRAPELLLGAKKYST-AVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLG 235
+ ++ PE+ G +S VD+WS G + + F G D I K+F+ +G
Sbjct: 171 SQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEG----DNIYKLFENIG 226
Query: 236 TPTETIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPE 295
G +PG P LS DLL +L Y+P
Sbjct: 227 K-------GSYAIPG----------------------DCGPPLS----DLLKGMLEYEPA 253
Query: 296 KRITVDDALNHYWFHE--------VPLPKSKD 319
KR ++ H WF + VP+P S D
Sbjct: 254 KRFSIRQIRQHSWFRKKHPPAEAPVPIPPSPD 285
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 86/311 (27%), Positives = 139/311 (44%), Gaps = 52/311 (16%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
+E I G+Y + R K + A+K + + K D E EI ILL
Sbjct: 24 YEVKEDIGVGSYSVCKRCIHKATNXEFAVKIIDKS---KRDPTE---------EIEILLR 71
Query: 73 F-DHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPF-STSEVKCLMLQLLEGV 130
+ HP+I+ +K+V DD VY+V E + + L + ++Q F S E ++ + + V
Sbjct: 72 YGQHPNIITLKDV-YDDGKYVYVVTE-LXKGGELLDKILRQKFFSEREASAVLFTITKTV 129
Query: 131 KYLHDNWVLHRDLKTSNLLL----NNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAP 186
+YLH V+HRDLK SN+L N ++ICDFG ++Q + + T + AP
Sbjct: 130 EYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCYTANFVAP 189
Query: 187 ELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLS 246
E +L + Y A D+WS+G ++ L F+ + D ++I +G+ G
Sbjct: 190 E-VLERQGYDAACDIWSLGVLLYTXLTGYTPFANGPD-DTPEEILARIGS-------GKF 240
Query: 247 ELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNH 306
L G N +S++ DL+++ L DP +R+T L H
Sbjct: 241 SLSGGYWN----------------------SVSDTAKDLVSKXLHVDPHQRLTAALVLRH 278
Query: 307 YWF-HEVPLPK 316
W H LP+
Sbjct: 279 PWIVHWDQLPQ 289
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 136/320 (42%), Gaps = 66/320 (20%)
Query: 2 NMLQGCRSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPI 61
N Q + +FE++ + G++G V + ++G A+K + K +E+
Sbjct: 33 NPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEH---- 88
Query: 62 SSLREINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKC 121
+L E IL + + P + + E D+ ++YMVMEY + F +
Sbjct: 89 -TLNEKRILQAVNFPFLTKL-EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARF 146
Query: 122 LMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYT-SLVVT 180
Q++ +YLH +++RDLK NL+++ QG +K+ DFG +++ +K T L T
Sbjct: 147 YAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKR----VKGRTWXLCGT 202
Query: 181 LWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTET 240
Y APE++L +K Y+ AVD W++G ++ E+ A P F
Sbjct: 203 PEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF---------------------- 239
Query: 241 IWPGLSELPGAKANFAKQPYNLLRK------RFPAASFTGSPVLSESGFDLLNRLLTYDP 294
FA QP + K RFP+ S DLL LL D
Sbjct: 240 --------------FADQPIQIYEKIVSGKVRFPSH-------FSSDLKDLLRNLLQVDL 278
Query: 295 EKRI-----TVDDALNHYWF 309
KR V+D NH WF
Sbjct: 279 TKRFGNLKNGVNDIKNHKWF 298
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 117/242 (48%), Gaps = 15/242 (6%)
Query: 11 FEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINIL 70
F+F K+ + EG++ V AR+ + A+K ++ KE+ + Y RE +++
Sbjct: 34 FKFGKI--LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPY-----VTRERDVM 86
Query: 71 LSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHD--LKWLMESMKQPFSTSEVKCLMLQLLE 128
DHP V + DD + +Y + Y ++ LK++ + F + + +++
Sbjct: 87 SRLDHPFFVKLYFTFQDD-EKLYFGLSYAKNGCLLKYIRKIGS--FDETCTRFYTAEIVS 143
Query: 129 GVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKP--YTSLVVTLWYRAP 186
++YLH ++HRDLK N+LLN ++I DFG ++ K S V T Y +P
Sbjct: 144 ALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSP 203
Query: 187 ELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLS 246
ELL K S + D+W++GCI+ +L+A P F E KI K E +P
Sbjct: 204 ELLT-EKSASKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR 262
Query: 247 EL 248
+L
Sbjct: 263 DL 264
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 128/300 (42%), Gaps = 47/300 (15%)
Query: 19 ISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSF-DHPS 77
I G +V R + +G A+K +++ R ++ RE +IL HP
Sbjct: 102 IGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPH 161
Query: 78 IVNVKEVVMDDHDS---VYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLH 134
I+ ++D ++S +++V + M + + K S E + +M LLE V +LH
Sbjct: 162 II----TLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLH 217
Query: 135 DNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGAKK 194
N ++HRDLK N+LL++ +++ DFG S + P + L T Y APE+L +
Sbjct: 218 ANNIVHRDLKPENILLDDNMQIRLSDFGFS-CHLEPGEKLRELCGTPGYLAPEILKCSMD 276
Query: 195 -----YSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELP 249
Y VD+W+ G I+ LLA P F ++ + I + + W
Sbjct: 277 ETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSSPEWDD----- 331
Query: 250 GAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWF 309
S + DL++RLL DPE R+T + AL H +F
Sbjct: 332 ----------------------------RSSTVKDLISRLLQVDPEARLTAEQALQHPFF 363
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 87.4 bits (215), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 99/210 (47%), Gaps = 18/210 (8%)
Query: 16 LNKISEGTYGIVYRARDKKSGEIVALK---KVKMNVGRKEDCLEYGFPISSLREINILLS 72
L I +G + V AR +G+ VA+K K ++N + RE+ I
Sbjct: 19 LKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLF---------REVRIXKV 69
Query: 73 FDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKY 132
+HP+IV + EV+ + ++Y+V EY + E + Q++ V+Y
Sbjct: 70 LNHPNIVKLFEVI-ETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQY 128
Query: 133 LHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQ--YGSPLKPYTSLVVTLWYRAPELLL 190
H +++HRDLK NLLL+ +KI DFG S + +G+ L + Y APEL
Sbjct: 129 CHQKFIVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDAFCG---APPYAAPELFQ 185
Query: 191 GAKKYSTAVDMWSVGCIMAELLAKKPLFSG 220
G K VD+WS+G I+ L++ F G
Sbjct: 186 GKKYDGPEVDVWSLGVILYTLVSGSLPFDG 215
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 87.4 bits (215), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 116/214 (54%), Gaps = 17/214 (7%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILL 71
+FEK++++ G G+V++ K SG ++A K + + + + +RE+ +L
Sbjct: 26 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI-------KPAIRNQIIRELQVLH 78
Query: 72 SFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSE--VKCLMLQLLEG 129
+ P IV D + + + ME+M D L + +K+ E + + + +++G
Sbjct: 79 ECNSPYIVGFYGAFYSDGE-ISICMEHM--DGGSLDQVLKKAGRIPEQILGKVSIAVIKG 135
Query: 130 VKYLHD-NWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPEL 188
+ YL + + ++HRD+K SN+L+N++G +K+CDFG+S Q + S V T Y +PE
Sbjct: 136 LTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA--NSFVGTRSYMSPER 193
Query: 189 LLGAKKYSTAVDMWSVGCIMAEL-LAKKPLFSGT 221
L G YS D+WS+G + E+ + + P+ SG+
Sbjct: 194 LQGT-HYSVQSDIWSMGLSLVEMAVGRYPIGSGS 226
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 103/205 (50%), Gaps = 12/205 (5%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
F KL++I +G++G VY+ D + E+VA+K + + E +EI +L
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIE-------DIQQEITVLSQ 73
Query: 73 FDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMK-QPFSTSEVKCLMLQLLEGVK 131
D P I + ++++MEY+ ++ +K P + + ++ ++L+G+
Sbjct: 74 CDSPYITRYFGSYLKS-TKLWIIMEYLGGGSA--LDLLKPGPLEETYIATILREILKGLD 130
Query: 132 YLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLG 191
YLH +HRD+K +N+LL+ QG +K+ DFG++ Q V T ++ APE ++
Sbjct: 131 YLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPE-VIK 189
Query: 192 AKKYSTAVDMWSVGCIMAELLAKKP 216
Y D+WS+G EL +P
Sbjct: 190 QSAYDFKADIWSLGITAIELAKGEP 214
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 123/303 (40%), Gaps = 61/303 (20%)
Query: 16 LNKISEGTYGIVYRARDKKSGEIVALK---KVKMNVGRKEDCLEYGFPISS---LREINI 69
L I +G + V AR +G VA+K K ++N P S RE+ I
Sbjct: 17 LKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLN------------PTSLQKLFREVRI 64
Query: 70 LLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEG 129
+ +HP+IV + EV+ + ++Y++MEY + E + Q++
Sbjct: 65 MKILNHPNIVKLFEVI-ETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSA 123
Query: 130 VKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQY--GSPLKPYTSLVVTLWYRAPE 187
V+Y H ++HRDLK NLLL+ +KI DFG S ++ G L + + Y APE
Sbjct: 124 VQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDTFCG---SPPYAAPE 180
Query: 188 LLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSE 247
L G K VD+WS+G I+ L++ F G
Sbjct: 181 LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG--------------------------- 213
Query: 248 LPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHY 307
Q LR+R + +S +LL R L +P KR T++ +
Sbjct: 214 ----------QNLKELRERVLRGKYRIPFYMSTDCENLLKRFLVLNPIKRGTLEQIMKDR 263
Query: 308 WFH 310
W +
Sbjct: 264 WIN 266
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/347 (25%), Positives = 149/347 (42%), Gaps = 47/347 (13%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
+E + + EGT+G V D G+ K+ NVG+ + ++ EIN+L
Sbjct: 21 YEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYRE--------AARLEINVLKK 72
Query: 73 FDHPSIVN-VKEVVMDD----HDSVYMVMEYM-EHDLKWLMESMKQPFSTSEVKCLMLQL 126
N V+M D H + + E + ++ ++L E+ QP+ V+ + QL
Sbjct: 73 IKEKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQL 132
Query: 127 LEGVKYLHDNWVLHRDLKTSNLLLNNQGV-------------------LKICDFGMSRQY 167
+++LH+N + H DLK N+L N +++ DFG +
Sbjct: 133 CHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSA--- 189
Query: 168 GSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQI 227
+ +T++V T YR PE++L ++ D+WS+GCI+ E LF + +
Sbjct: 190 TFDHEHHTTIVATRHYRPPEVILEL-GWAQPCDVWSIGCILFEYYRGFTLFQTHENREHL 248
Query: 228 DKIFKTLG-TPTETIWPGLSELPGAKANFAKQPYNLLRKRF------PAASFTGSPVLSE 280
+ K LG P+ I + K N R+ P S+ L
Sbjct: 249 VMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDE-NSSDGRYVKENCKPLKSYMLQDSLEH 307
Query: 281 SG-FDLLNRLLTYDPEKRITVDDALNHYWFHEVPLPKSKDFMPTFPP 326
FDL+ R+L +DP +RIT+ +AL H +F + P+ + F + P
Sbjct: 308 VQLFDLMRRMLEFDPAQRITLAEALLHPFFAGLT-PEERSFHTSRNP 353
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 115/234 (49%), Gaps = 27/234 (11%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISS-----LRE 66
++E L I G+YG + R K G+I+ K+ L+YG + + E
Sbjct: 7 DYEVLYTIGTGSYGRCQKIRRKSDGKILVWKE-----------LDYGSMTEAEKQMLVSE 55
Query: 67 INILLSFDHPSIVNVKEVVMD-DHDSVYMVMEYMEH-DLKWLMES---MKQPFSTSEVKC 121
+N+L HP+IV + ++D + ++Y+VMEY E DL ++ +Q V
Sbjct: 56 VNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLR 115
Query: 122 LMLQLLEGVKYLH-----DNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTS 176
+M QL +K H + VLHRDLK +N+ L+ + +K+ DFG++R
Sbjct: 116 VMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKE 175
Query: 177 LVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKI 230
V T +Y +PE + Y+ D+WS+GC++ EL A P F+ ++ + KI
Sbjct: 176 FVGTPYYMSPE-QMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKI 228
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 122/303 (40%), Gaps = 61/303 (20%)
Query: 16 LNKISEGTYGIVYRARDKKSGEIVALK---KVKMNVGRKEDCLEYGFPISS---LREINI 69
L I +G + V AR +G VA+K K ++N P S RE+ I
Sbjct: 20 LKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLN------------PTSLQKLFREVRI 67
Query: 70 LLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEG 129
+ +HP+IV + EV+ + ++Y++MEY + E + Q++
Sbjct: 68 MKILNHPNIVKLFEVI-ETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSA 126
Query: 130 VKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQY--GSPLKPYTSLVVTLWYRAPE 187
V+Y H ++HRDLK NLLL+ +KI DFG S ++ G L + Y APE
Sbjct: 127 VQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFCG---APPYAAPE 183
Query: 188 LLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSE 247
L G K VD+WS+G I+ L++ F G
Sbjct: 184 LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG--------------------------- 216
Query: 248 LPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHY 307
Q LR+R + +S +LL R L +P KR T++ +
Sbjct: 217 ----------QNLKELRERVLRGKYRIPFYMSTDCENLLKRFLVLNPIKRGTLEQIMKDR 266
Query: 308 WFH 310
W +
Sbjct: 267 WIN 269
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 109/207 (52%), Gaps = 16/207 (7%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILL 71
+FE+++++ G G+V + + + SG I+A K + + + + +RE+ +L
Sbjct: 17 DFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEI-------KPAIRNQIIRELQVLH 69
Query: 72 SFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSE--VKCLMLQLLEG 129
+ P IV D + + + ME+M D L + +K+ E + + + +L G
Sbjct: 70 ECNSPYIVGFYGAFYSDGE-ISICMEHM--DGGSLDQVLKEAKRIPEEILGKVSIAVLRG 126
Query: 130 VKYLHD-NWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPEL 188
+ YL + + ++HRD+K SN+L+N++G +K+CDFG+S Q + S V T Y APE
Sbjct: 127 LAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA--NSFVGTRSYMAPER 184
Query: 189 LLGAKKYSTAVDMWSVGCIMAELLAKK 215
L G YS D+WS+G + EL +
Sbjct: 185 LQGT-HYSVQSDIWSMGLSLVELAVGR 210
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 139/300 (46%), Gaps = 52/300 (17%)
Query: 19 ISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSI 78
+ EG++G V A K+ + VALK + + +K D + REI+ L HP I
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSD-----MHMRVEREISYLKLLRHPHI 71
Query: 79 VNVKEVVMDDHDSVYMVMEYMEHDL-KWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNW 137
+ + +V+ D V MV+EY +L +++E K+ + E + Q++ ++Y H +
Sbjct: 72 IKLYDVITTPTDIV-MVIEYAGGELFDYIVE--KKRMTEDEGRRFFQQIICAIEYCHRHK 128
Query: 138 VLHRDLKTSNLLLNNQGVLKICDFGMSR--QYGSPLKPYTSLVVTLWYRAPELLLGAKKY 195
++HRDLK NLLL++ +KI DFG+S G+ LK + Y APE++ G
Sbjct: 129 IVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSCG---SPNYAAPEVINGKLYA 185
Query: 196 STAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGAKANF 255
VD+WS G ++ +L + F + I +FK + + + LS PGA++
Sbjct: 186 GPEVDVWSCGIVLYVMLVGRLPFDD----EFIPNLFKKVNSCVYVMPDFLS--PGAQS-- 237
Query: 256 AKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVPLP 315
L+ R++ DP +RIT+ + WF+ V LP
Sbjct: 238 -----------------------------LIRRMIVADPMQRITIQEIRRDPWFN-VNLP 267
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 114/227 (50%), Gaps = 6/227 (2%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILL 71
+FE L + +G++G V+ + + L +K+ K+ L+ + + E +IL+
Sbjct: 25 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKV---LKKATLKVRDRVRTKMERDILV 81
Query: 72 SFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVK 131
+HP IV + +Y++++++ + S + F+ +VK + +L +
Sbjct: 82 EVNHPFIVKL-HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALD 140
Query: 132 YLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLG 191
+LH +++RDLK N+LL+ +G +K+ DFG+S++ K S T+ Y APE ++
Sbjct: 141 HLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPE-VVN 199
Query: 192 AKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKT-LGTP 237
+ ++ + D WS G +M E+L F G + + I K LG P
Sbjct: 200 RRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMP 246
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/330 (25%), Positives = 142/330 (43%), Gaps = 46/330 (13%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
+E + + EGT+G V D G+ K+ NVG+ + ++ EIN+L
Sbjct: 30 YEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYRE--------AARLEINVLKK 81
Query: 73 FDHPSIVN-VKEVVMDD----HDSVYMVMEYM-EHDLKWLMESMKQPFSTSEVKCLMLQL 126
N V+M D H + + E + ++ ++L E+ QP+ V+ + QL
Sbjct: 82 IKEKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQL 141
Query: 127 LEGVKYLHDNWVLHRDLKTSNLLLNNQGV-------------------LKICDFGMSRQY 167
+++LH+N + H DLK N+L N +++ DFG +
Sbjct: 142 CHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSA--- 198
Query: 168 GSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQI 227
+ +T++V T YR PE++L ++ D+WS+GCI+ E LF + +
Sbjct: 199 TFDHEHHTTIVATRHYRPPEVILEL-GWAQPCDVWSIGCILFEYYRGFTLFQTHENREHL 257
Query: 228 DKIFKTLG-TPTETIWPGLSELPGAKANFAKQPYNLLRKRF------PAASFTGSPVLSE 280
+ K LG P+ I + K N R+ P S+ L
Sbjct: 258 VMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDE-NSSDGRYVKENCKPLKSYMLQDSLEH 316
Query: 281 SG-FDLLNRLLTYDPEKRITVDDALNHYWF 309
FDL+ R+L +DP +RIT+ +AL H +F
Sbjct: 317 VQLFDLMRRMLEFDPAQRITLAEALLHPFF 346
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 116/242 (47%), Gaps = 15/242 (6%)
Query: 11 FEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINIL 70
F+F K+ + EG++ V AR+ + A+K ++ KE+ + Y RE +++
Sbjct: 35 FKFGKI--LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPY-----VTRERDVM 87
Query: 71 LSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHD--LKWLMESMKQPFSTSEVKCLMLQLLE 128
DHP V + DD + +Y + Y ++ LK++ + F + + +++
Sbjct: 88 SRLDHPFFVKLYFTFQDD-EKLYFGLSYAKNGELLKYIRKIGS--FDETCTRFYTAEIVS 144
Query: 129 GVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKP--YTSLVVTLWYRAP 186
++YLH ++HRDLK N+LLN ++I DFG ++ K S V T Y +P
Sbjct: 145 ALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSP 204
Query: 187 ELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLS 246
ELL K + D+W++GCI+ +L+A P F E KI K E +P
Sbjct: 205 ELLT-EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR 263
Query: 247 EL 248
+L
Sbjct: 264 DL 265
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 104/206 (50%), Gaps = 14/206 (6%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
F KL +I +G++G V++ D ++ ++VA+K + + E +EI +L
Sbjct: 25 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQ-------QEITVLSQ 77
Query: 73 FDHPSIVNVKEVVMDDHDSVYMVMEYMEHD--LKWLMESMKQPFSTSEVKCLMLQLLEGV 130
D + + ++++MEY+ L L PF ++ ++ ++L+G+
Sbjct: 78 CDSSYVTKYYGSYLKG-SKLWIIMEYLGGGSALDLLRAG---PFDEFQIATMLKEILKGL 133
Query: 131 KYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLL 190
YLH +HRD+K +N+LL+ QG +K+ DFG++ Q + V T ++ APE++
Sbjct: 134 DYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQ 193
Query: 191 GAKKYSTAVDMWSVGCIMAELLAKKP 216
+ Y + D+WS+G EL +P
Sbjct: 194 QS-AYDSKADIWSLGITAIELAKGEP 218
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 114/227 (50%), Gaps = 6/227 (2%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILL 71
+FE L + +G++G V+ + + L +K+ K+ L+ + + E +IL+
Sbjct: 25 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKV---LKKATLKVRDRVRTKMERDILV 81
Query: 72 SFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVK 131
+HP IV + +Y++++++ + S + F+ +VK + +L +
Sbjct: 82 EVNHPFIVKL-HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALD 140
Query: 132 YLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLG 191
+LH +++RDLK N+LL+ +G +K+ DFG+S++ K S T+ Y APE ++
Sbjct: 141 HLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPE-VVN 199
Query: 192 AKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKT-LGTP 237
+ ++ + D WS G +M E+L F G + + I K LG P
Sbjct: 200 RRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMP 246
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 84/330 (25%), Positives = 142/330 (43%), Gaps = 46/330 (13%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
+E + + EGT+G V D G+ K+ NVG+ + ++ EIN+L
Sbjct: 53 YEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYRE--------AARLEINVLKK 104
Query: 73 FDHPSIVN-VKEVVMDD----HDSVYMVMEYM-EHDLKWLMESMKQPFSTSEVKCLMLQL 126
N V+M D H + + E + ++ ++L E+ QP+ V+ + QL
Sbjct: 105 IKEKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQL 164
Query: 127 LEGVKYLHDNWVLHRDLKTSNLLLNNQGV-------------------LKICDFGMSRQY 167
+++LH+N + H DLK N+L N +++ DFG +
Sbjct: 165 CHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSA--- 221
Query: 168 GSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQI 227
+ +T++V T YR PE++L ++ D+WS+GCI+ E LF + +
Sbjct: 222 TFDHEHHTTIVATRHYRPPEVILEL-GWAQPCDVWSIGCILFEYYRGFTLFQTHENREHL 280
Query: 228 DKIFKTLG-TPTETIWPGLSELPGAKANFAKQPYNLLRKRF------PAASFTGSPVLSE 280
+ K LG P+ I + K N R+ P S+ L
Sbjct: 281 VMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDE-NSSDGRYVKENCKPLKSYMLQDSLEH 339
Query: 281 SG-FDLLNRLLTYDPEKRITVDDALNHYWF 309
FDL+ R+L +DP +RIT+ +AL H +F
Sbjct: 340 VQLFDLMRRMLEFDPAQRITLAEALLHPFF 369
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 114/227 (50%), Gaps = 6/227 (2%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILL 71
+FE L + +G++G V+ + + L +K+ K+ L+ + + E +IL+
Sbjct: 26 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKV---LKKATLKVRDRVRTKMERDILV 82
Query: 72 SFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVK 131
+HP IV + +Y++++++ + S + F+ +VK + +L +
Sbjct: 83 EVNHPFIVKL-HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALD 141
Query: 132 YLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLG 191
+LH +++RDLK N+LL+ +G +K+ DFG+S++ K S T+ Y APE ++
Sbjct: 142 HLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPE-VVN 200
Query: 192 AKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKT-LGTP 237
+ ++ + D WS G +M E+L F G + + I K LG P
Sbjct: 201 RRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMP 247
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 109/203 (53%), Gaps = 16/203 (7%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILL 71
+FEK++++ G G+V++ K SG ++A K + + + + +RE+ +L
Sbjct: 69 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI-------KPAIRNQIIRELQVLH 121
Query: 72 SFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSE--VKCLMLQLLEG 129
+ P IV D + + + ME+M D L + +K+ E + + + +++G
Sbjct: 122 ECNSPYIVGFYGAFYSDGE-ISICMEHM--DGGSLDQVLKKAGRIPEQILGKVSIAVIKG 178
Query: 130 VKYLHD-NWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPEL 188
+ YL + + ++HRD+K SN+L+N++G +K+CDFG+S Q + S V T Y +PE
Sbjct: 179 LTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA--NSFVGTRSYMSPER 236
Query: 189 LLGAKKYSTAVDMWSVGCIMAEL 211
L G YS D+WS+G + E+
Sbjct: 237 LQGT-HYSVQSDIWSMGLSLVEM 258
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 83/335 (24%), Positives = 146/335 (43%), Gaps = 56/335 (16%)
Query: 13 FEKLNKISEGTYGIVYRARD-KKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILL 71
+E ++ + EGT+G V + D ++ G VALK +K NV + ++ ++ EIN+L
Sbjct: 35 YEIVSTLGEGTFGRVVQCVDHRRGGARVALKIIK-NVEKYKE--------AARLEINVLE 85
Query: 72 SFDHPSIVNVKEVV-----MDDHDSVYMVMEYME-HDLKWLMESMKQPFSTSEVKCLMLQ 125
+ N V D H + + E + +L ++ P+ +V+ + Q
Sbjct: 86 KINEKDPDNKNLCVQMFDWFDYHGHMCISFELLGLSTFDFLKDNNYLPYPIHQVRHMAFQ 145
Query: 126 LLEGVKYLHDNWVLHRDLKTSNLLLNNQG-------------------VLKICDFGMSRQ 166
L + VK+LHDN + H DLK N+L N +++ DFG +
Sbjct: 146 LCQAVKFLHDNKLTHTDLKPENILFVNSDYELTYNLEKKRDERSVKSTAVRVVDFGSA-- 203
Query: 167 YGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQ 226
+ ++++V T YRAPE++L +S D+WS+GCI+ E LF +
Sbjct: 204 -TFDHEHHSTIVSTRHYRAPEVILEL-GWSQPCDVWSIGCIIFEYYVGFTLFQTHDNREH 261
Query: 227 IDKIFKTLG-TPTETIWPGLSEL-----------PGAKANFAKQPYNLLRKRFPAASFTG 274
+ + + LG P+ I + + + ++ LR+ T
Sbjct: 262 LAMMERILGPIPSRMIRKTRKQKYFYRGRLDWDENTSAGRYVRENCKPLRR-----YLTS 316
Query: 275 SPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWF 309
FDL+ +L Y+P KR+T+ +AL H +F
Sbjct: 317 EAEEHHQLFDLIESMLEYEPAKRLTLGEALQHPFF 351
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 111/212 (52%), Gaps = 18/212 (8%)
Query: 9 SVFEFEKLNKISEGTYGIVYRARDKKSGE---IVALKKVKMNVGRKEDCLEYGFPISSLR 65
S + EK+ I G +G V R K G+ VA+K +K K+ F L
Sbjct: 29 SCIKIEKV--IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQ---RRDF----LS 79
Query: 66 EINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEH-DLKWLMESMKQPFSTSEVKCLML 124
E +I+ FDHP+I++++ VV V ++ EYME+ L + F+ ++ ++
Sbjct: 80 EASIMGQFDHPNIIHLEGVVTK-CKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLR 138
Query: 125 QLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQY-GSPLKPYTSL--VVTL 181
+ G+KYL D +HRDL N+L+N+ V K+ DFGMSR P YT+ + +
Sbjct: 139 GIGSGMKYLSDMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPI 198
Query: 182 WYRAPELLLGAKKYSTAVDMWSVGCIMAELLA 213
+ APE + +K+++A D+WS G +M E+++
Sbjct: 199 RWTAPE-AIAYRKFTSASDVWSYGIVMWEVMS 229
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 134/312 (42%), Gaps = 53/312 (16%)
Query: 18 KISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPS 77
++ G +G+V+R ++ +G A K V ++ + +EI + HP+
Sbjct: 164 ELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVR--------KEIQTMSVLRHPT 215
Query: 78 IVNVKEVVMDDHDSVYMVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDN 136
+VN+ + DD++ V M+ E+M +L + S E M Q+ +G+ ++H+N
Sbjct: 216 LVNLHDAFEDDNEMV-MIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHEN 274
Query: 137 WVLHRDLKTSNLLLNNQ--GVLKICDFGMSRQYGSPLKPYTSLVVTLW---YRAPELLLG 191
+H DLK N++ + LK+ DFG++ L P S+ VT + APE+ G
Sbjct: 275 NYVHLDLKPENIMFTTKRSNELKLIDFGLTAH----LDPKQSVKVTTGTAEFAAPEVAEG 330
Query: 192 AKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGA 251
K DMWSVG + LL+ F G + + +
Sbjct: 331 -KPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETL------------------------ 365
Query: 252 KANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHE 311
N +N+ ++F+G +SE G D + +LL DP R+T+ AL H W
Sbjct: 366 -RNVKSCDWNM-----DDSAFSG---ISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTP 416
Query: 312 VPLPKSKDFMPT 323
P +P+
Sbjct: 417 GNAPGRDSQIPS 428
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 116/242 (47%), Gaps = 15/242 (6%)
Query: 11 FEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINIL 70
F+F K+ + EG++ V AR+ + A+K ++ KE+ + Y RE +++
Sbjct: 31 FKFGKI--LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPY-----VTRERDVM 83
Query: 71 LSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHD--LKWLMESMKQPFSTSEVKCLMLQLLE 128
DHP V + DD + +Y + Y ++ LK++ + F + + +++
Sbjct: 84 SRLDHPFFVKLYFTFQDD-EKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFYTAEIVS 140
Query: 129 GVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYG--SPLKPYTSLVVTLWYRAP 186
++YLH ++HRDLK N+LLN ++I DFG ++ S S V T Y +P
Sbjct: 141 ALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSP 200
Query: 187 ELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLS 246
ELL K + D+W++GCI+ +L+A P F E KI K E +P
Sbjct: 201 ELLT-EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR 259
Query: 247 EL 248
+L
Sbjct: 260 DL 261
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 110/207 (53%), Gaps = 16/207 (7%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILL 71
+FEK++++ G G+V++ K SG ++A K + + + + +RE+ +L
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI-------KPAIRNQIIRELQVLH 59
Query: 72 SFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSE--VKCLMLQLLEG 129
+ P IV D + + + ME+M D L + +K+ E + + + +++G
Sbjct: 60 ECNSPYIVGFYGAFYSDGE-ISICMEHM--DGGSLDQVLKKAGRIPEQILGKVSIAVIKG 116
Query: 130 VKYLHD-NWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPEL 188
+ YL + + ++HRD+K SN+L+N++G +K+CDFG+S Q + S V T Y +PE
Sbjct: 117 LTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA--NSFVGTRSYMSPER 174
Query: 189 LLGAKKYSTAVDMWSVGCIMAELLAKK 215
L G YS D+WS+G + E+ +
Sbjct: 175 LQGT-HYSVQSDIWSMGLSLVEMAVGR 200
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 132/312 (42%), Gaps = 53/312 (16%)
Query: 18 KISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPS 77
++ G +G+V+R ++ +G A K V ++ + +EI + HP+
Sbjct: 58 ELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVR--------KEIQTMSVLRHPT 109
Query: 78 IVNVKEVVMDDHDSVYMVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDN 136
+VN+ + DD++ V M+ E+M +L + S E M Q+ +G+ ++H+N
Sbjct: 110 LVNLHDAFEDDNEMV-MIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHEN 168
Query: 137 WVLHRDLKTSNLLLNNQ--GVLKICDFGMSRQYGSPLKPYTSLVVTLW---YRAPELLLG 191
+H DLK N++ + LK+ DFG++ L P S+ VT + APE+ G
Sbjct: 169 NYVHLDLKPENIMFTTKRSNELKLIDFGLTAH----LDPKQSVKVTTGTAEFAAPEVAEG 224
Query: 192 AKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGA 251
K DMWSVG + LL+ F G + + TL W
Sbjct: 225 -KPVGYYTDMWSVGVLSYILLSGLSPFGGENDDE-------TLRNVKSCDW--------- 267
Query: 252 KANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHE 311
++F+G +SE G D + +LL DP R+T+ AL H W
Sbjct: 268 --------------NMDDSAFSG---ISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTP 310
Query: 312 VPLPKSKDFMPT 323
P +P+
Sbjct: 311 GNAPGRDSQIPS 322
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 129/298 (43%), Gaps = 52/298 (17%)
Query: 22 GTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNV 81
G G V +++G+ ALK L Y P + + + P IV +
Sbjct: 21 GVNGKVLECFHRRTGQKCALK------------LLYDSPKARQEVDHHWQASGGPHIVCI 68
Query: 82 KEVVMDDHDS---VYMVMEYMEHD--LKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDN 136
+V + H + ++ME ME + E Q F+ E +M + +++LH +
Sbjct: 69 LDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSH 128
Query: 137 WVLHRDLKTSNLLLNNQ---GVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGAK 193
+ HRD+K NLL ++ VLK+ DFG +++ + + T +Y APE+L G +
Sbjct: 129 NIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKE--TTQNALQTPCYTPYYVAPEVL-GPE 185
Query: 194 KYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGAKA 253
KY + DMWS+G IM LL P F T + I PG+
Sbjct: 186 KYDKSCDMWSLGVIMYILLCGFPPFYSNT---------------GQAISPGM-------- 222
Query: 254 NFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHE 311
K+ L + FP ++ +SE L+ LL DP +R+T+ +NH W ++
Sbjct: 223 ---KRRIRLGQYGFPNPEWSE---VSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQ 274
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 110/207 (53%), Gaps = 16/207 (7%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILL 71
+FEK++++ G G+V++ K SG ++A K + + + + +RE+ +L
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI-------KPAIRNQIIRELQVLH 59
Query: 72 SFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSE--VKCLMLQLLEG 129
+ P IV D + + + ME+M D L + +K+ E + + + +++G
Sbjct: 60 ECNSPYIVGFYGAFYSDGE-ISICMEHM--DGGSLDQVLKKAGRIPEQILGKVSIAVIKG 116
Query: 130 VKYLHD-NWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPEL 188
+ YL + + ++HRD+K SN+L+N++G +K+CDFG+S Q + S V T Y +PE
Sbjct: 117 LTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA--NSFVGTRSYMSPER 174
Query: 189 LLGAKKYSTAVDMWSVGCIMAELLAKK 215
L G YS D+WS+G + E+ +
Sbjct: 175 LQGT-HYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 109/203 (53%), Gaps = 16/203 (7%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILL 71
+FEK++++ G G+V++ K SG ++A K + + + + +RE+ +L
Sbjct: 34 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI-------KPAIRNQIIRELQVLH 86
Query: 72 SFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSE--VKCLMLQLLEG 129
+ P IV D + + + ME+M D L + +K+ E + + + +++G
Sbjct: 87 ECNSPYIVGFYGAFYSDGE-ISICMEHM--DGGSLDQVLKKAGRIPEQILGKVSIAVIKG 143
Query: 130 VKYLHD-NWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPEL 188
+ YL + + ++HRD+K SN+L+N++G +K+CDFG+S Q + S V T Y +PE
Sbjct: 144 LTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA--NSFVGTRSYMSPER 201
Query: 189 LLGAKKYSTAVDMWSVGCIMAEL 211
L G YS D+WS+G + E+
Sbjct: 202 LQGT-HYSVQSDIWSMGLSLVEM 223
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 116/242 (47%), Gaps = 15/242 (6%)
Query: 11 FEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINIL 70
F+F K+ + EG++ V AR+ + A+K ++ KE+ + Y RE +++
Sbjct: 32 FKFGKI--LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPY-----VTRERDVM 84
Query: 71 LSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHD--LKWLMESMKQPFSTSEVKCLMLQLLE 128
DHP V + DD + +Y + Y ++ LK++ + F + + +++
Sbjct: 85 SRLDHPFFVKLYFTFQDD-EKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFYTAEIVS 141
Query: 129 GVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKP--YTSLVVTLWYRAP 186
++YLH ++HRDLK N+LLN ++I DFG ++ K + V T Y +P
Sbjct: 142 ALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSP 201
Query: 187 ELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLS 246
ELL K + D+W++GCI+ +L+A P F E KI K E +P
Sbjct: 202 ELLT-EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR 260
Query: 247 EL 248
+L
Sbjct: 261 DL 262
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 116/242 (47%), Gaps = 15/242 (6%)
Query: 11 FEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINIL 70
F+F K+ + EG++ V AR+ + A+K ++ KE+ + Y RE +++
Sbjct: 11 FKFGKI--LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPY-----VTRERDVM 63
Query: 71 LSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHD--LKWLMESMKQPFSTSEVKCLMLQLLE 128
DHP V + DD + +Y + Y ++ LK++ + F + + +++
Sbjct: 64 SRLDHPFFVKLYFTFQDD-EKLYFGLSYAKNGELLKYIRKIGS--FDETCTRFYTAEIVS 120
Query: 129 GVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTS--LVVTLWYRAP 186
++YLH ++HRDLK N+LLN ++I DFG ++ K + V T Y +P
Sbjct: 121 ALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 180
Query: 187 ELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLS 246
ELL K + D+W++GCI+ +L+A P F E KI K E +P
Sbjct: 181 ELLT-EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR 239
Query: 247 EL 248
+L
Sbjct: 240 DL 241
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 129/298 (43%), Gaps = 52/298 (17%)
Query: 22 GTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNV 81
G G V +++G+ ALK L Y P + + + P IV +
Sbjct: 40 GVNGKVLECFHRRTGQKCALK------------LLYDSPKARQEVDHHWQASGGPHIVCI 87
Query: 82 KEVVMDDHDS---VYMVMEYMEHD--LKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDN 136
+V + H + ++ME ME + E Q F+ E +M + +++LH +
Sbjct: 88 LDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSH 147
Query: 137 WVLHRDLKTSNLLLNNQ---GVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGAK 193
+ HRD+K NLL ++ VLK+ DFG +++ + + T +Y APE+L G +
Sbjct: 148 NIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKE--TTQNALQTPCYTPYYVAPEVL-GPE 204
Query: 194 KYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGAKA 253
KY + DMWS+G IM LL P F T + I PG+
Sbjct: 205 KYDKSCDMWSLGVIMYILLCGFPPFYSNT---------------GQAISPGM-------- 241
Query: 254 NFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHE 311
K+ L + FP ++ +SE L+ LL DP +R+T+ +NH W ++
Sbjct: 242 ---KRRIRLGQYGFPNPEWSE---VSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQ 293
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 113/214 (52%), Gaps = 18/214 (8%)
Query: 19 ISEGTYGIVYRARDKKSGEI---VALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDH 75
I G +G V R K G+ VA+K +K+ K+ L E +I+ FDH
Sbjct: 30 IGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQR-------RDFLGEASIMGQFDH 82
Query: 76 PSIVNVKEVVMDDHDSVYMVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLH 134
P+I++++ VV V +V EYME+ L ++ F+ ++ ++ + G+KYL
Sbjct: 83 PNIIHLEGVVTKSK-PVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGISAGMKYLS 141
Query: 135 DNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQY-GSPLKPYTSL--VVTLWYRAPELLLG 191
D +HRDL N+L+N+ V K+ DFG+SR P YT+ + + + APE +
Sbjct: 142 DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPE-AIA 200
Query: 192 AKKYSTAVDMWSVGCIMAELLA--KKPLFSGTTE 223
+K+++A D+WS G +M E+++ ++P + T +
Sbjct: 201 FRKFTSASDVWSYGIVMWEVVSYGERPYWEMTNQ 234
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 110/207 (53%), Gaps = 16/207 (7%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILL 71
+FEK++++ G G+V++ K SG ++A K + + + + +RE+ +L
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI-------KPAIRNQIIRELQVLH 59
Query: 72 SFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSE--VKCLMLQLLEG 129
+ P IV D + + + ME+M D L + +K+ E + + + +++G
Sbjct: 60 ECNSPYIVGFYGAFYSDGE-ISICMEHM--DGGSLDQVLKKAGRIPEQILGKVSIAVIKG 116
Query: 130 VKYLHD-NWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPEL 188
+ YL + + ++HRD+K SN+L+N++G +K+CDFG+S Q + S V T Y +PE
Sbjct: 117 LTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA--NSFVGTRSYMSPER 174
Query: 189 LLGAKKYSTAVDMWSVGCIMAELLAKK 215
L G YS D+WS+G + E+ +
Sbjct: 175 LQGT-HYSVQSDIWSMGLSLVEMAVGR 200
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 116/242 (47%), Gaps = 15/242 (6%)
Query: 11 FEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINIL 70
F+F K+ + EG++ V AR+ + A+K ++ KE+ + Y RE +++
Sbjct: 12 FKFGKI--LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPY-----VTRERDVM 64
Query: 71 LSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHD--LKWLMESMKQPFSTSEVKCLMLQLLE 128
DHP V + DD + +Y + Y ++ LK++ + F + + +++
Sbjct: 65 SRLDHPFFVKLYFTFQDD-EKLYFGLSYAKNGELLKYIRKIGS--FDETCTRFYTAEIVS 121
Query: 129 GVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTS--LVVTLWYRAP 186
++YLH ++HRDLK N+LLN ++I DFG ++ K + V T Y +P
Sbjct: 122 ALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 181
Query: 187 ELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLS 246
ELL K + D+W++GCI+ +L+A P F E KI K E +P
Sbjct: 182 ELLT-EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR 240
Query: 247 EL 248
+L
Sbjct: 241 DL 242
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 92/343 (26%), Positives = 143/343 (41%), Gaps = 72/343 (20%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSG-EIVALKKVK-----MNVGRKE----DCLEYGFPIS 62
+E ++ + EG +G V D K+G VA+K VK R E + L P S
Sbjct: 16 YEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNS 75
Query: 63 SLREINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYME-HDLKWLMESMKQPFSTSEVKC 121
+ R + +L F+H H + +V E + ++ E+ PF ++
Sbjct: 76 TFRCVQMLEWFEH-------------HGHICIVFELLGLSTYDFIKENGFLPFRLDHIRK 122
Query: 122 LMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGV-------------------LKICDFG 162
+ Q+ + V +LH N + H DLK N+L +K+ DFG
Sbjct: 123 MAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFG 182
Query: 163 MSRQYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTT 222
S Y + +++LV T YRAPE++L A +S D+WS+GCI+ E +F
Sbjct: 183 -SATYDD--EHHSTLVSTRHYRAPEVIL-ALGWSQPCDVWSIGCILIEYYLGFTVFPTHD 238
Query: 223 EVDQIDKIFKTLG-TPTETI---------------WPGLSELPGAKANFAKQPYNLLRKR 266
+ + + + LG P I W S G + A +P K
Sbjct: 239 SKEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSS-AGRYVSRACKPL----KE 293
Query: 267 FPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWF 309
F V E FDL+ ++L YDP KRIT+ +AL H +F
Sbjct: 294 F----MLSQDVEHERLFDLIQKMLEYDPAKRITLREALKHPFF 332
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 116/242 (47%), Gaps = 15/242 (6%)
Query: 11 FEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINIL 70
F+F K+ + EG++ V AR+ + A+K ++ KE+ + Y RE +++
Sbjct: 35 FKFGKI--LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPY-----VTRERDVM 87
Query: 71 LSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHD--LKWLMESMKQPFSTSEVKCLMLQLLE 128
DHP V + DD + +Y + Y ++ LK++ + F + + +++
Sbjct: 88 SRLDHPFFVKLYFTFQDD-EKLYFGLSYAKNGELLKYIRKIGS--FDETCTRFYTAEIVS 144
Query: 129 GVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTS--LVVTLWYRAP 186
++YLH ++HRDLK N+LLN ++I DFG ++ K + V T Y +P
Sbjct: 145 ALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 204
Query: 187 ELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLS 246
ELL K + D+W++GCI+ +L+A P F E KI K E +P
Sbjct: 205 ELLT-EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR 263
Query: 247 EL 248
+L
Sbjct: 264 DL 265
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 116/242 (47%), Gaps = 15/242 (6%)
Query: 11 FEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINIL 70
F+F K+ + EG++ V AR+ + A+K ++ KE+ + Y RE +++
Sbjct: 34 FKFGKI--LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPY-----VTRERDVM 86
Query: 71 LSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHD--LKWLMESMKQPFSTSEVKCLMLQLLE 128
DHP V + DD + +Y + Y ++ LK++ + F + + +++
Sbjct: 87 SRLDHPFFVKLYFTFQDD-EKLYFGLSYAKNGELLKYIRKIGS--FDETCTRFYTAEIVS 143
Query: 129 GVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTS--LVVTLWYRAP 186
++YLH ++HRDLK N+LLN ++I DFG ++ K + V T Y +P
Sbjct: 144 ALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 203
Query: 187 ELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLS 246
ELL K + D+W++GCI+ +L+A P F E KI K E +P
Sbjct: 204 ELLT-EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR 262
Query: 247 EL 248
+L
Sbjct: 263 DL 264
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 130/296 (43%), Gaps = 52/296 (17%)
Query: 11 FEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINIL 70
F+F K+ + EG++ V AR+ + A+K ++ KE+ + Y RE +++
Sbjct: 37 FKFGKI--LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPY-----VTRERDVM 89
Query: 71 LSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHD--LKWLMESMKQPFSTSEVKCLMLQLLE 128
DHP V + DD + +Y + Y ++ LK++ + F + + +++
Sbjct: 90 SRLDHPFFVKLYFTFQDD-EKLYFGLSYAKNGELLKYIRKIGS--FDETCTRFYTAEIVS 146
Query: 129 GVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTS--LVVTLWYRAP 186
++YLH ++HRDLK N+LLN ++I DFG ++ K + V T Y +P
Sbjct: 147 ALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 206
Query: 187 ELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLS 246
ELL K + D+W++GCI+ +L+A P F E KI K
Sbjct: 207 ELLT-EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK-------------- 251
Query: 247 ELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDD 302
L FPAA F + DL+ +LL D KR+ ++
Sbjct: 252 ----------------LEYDFPAAFFPKAR-------DLVEKLLVLDATKRLGCEE 284
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 116/242 (47%), Gaps = 15/242 (6%)
Query: 11 FEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINIL 70
F+F K+ + EG++ V AR+ + A+K ++ KE+ + Y RE +++
Sbjct: 10 FKFGKI--LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPY-----VTRERDVM 62
Query: 71 LSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHD--LKWLMESMKQPFSTSEVKCLMLQLLE 128
DHP V + DD + +Y + Y ++ LK++ + F + + +++
Sbjct: 63 SRLDHPFFVKLYFTFQDD-EKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFYTAEIVS 119
Query: 129 GVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTS--LVVTLWYRAP 186
++YLH ++HRDLK N+LLN ++I DFG ++ K + V T Y +P
Sbjct: 120 ALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 179
Query: 187 ELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLS 246
ELL K + D+W++GCI+ +L+A P F E KI K E +P
Sbjct: 180 ELLT-EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR 238
Query: 247 EL 248
+L
Sbjct: 239 DL 240
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 116/242 (47%), Gaps = 15/242 (6%)
Query: 11 FEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINIL 70
F+F K+ + EG++ V AR+ + A+K ++ KE+ + Y RE +++
Sbjct: 34 FKFGKI--LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPY-----VTRERDVM 86
Query: 71 LSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHD--LKWLMESMKQPFSTSEVKCLMLQLLE 128
DHP V + DD + +Y + Y ++ LK++ + F + + +++
Sbjct: 87 SRLDHPFFVKLYFTFQDD-EKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFYTAEIVS 143
Query: 129 GVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTS--LVVTLWYRAP 186
++YLH ++HRDLK N+LLN ++I DFG ++ K + V T Y +P
Sbjct: 144 ALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 203
Query: 187 ELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLS 246
ELL K + D+W++GCI+ +L+A P F E KI K E +P
Sbjct: 204 ELLT-EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR 262
Query: 247 EL 248
+L
Sbjct: 263 DL 264
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 116/242 (47%), Gaps = 15/242 (6%)
Query: 11 FEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINIL 70
F+F K+ + EG++ V AR+ + A+K ++ KE+ + Y RE +++
Sbjct: 34 FKFGKI--LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPY-----VTRERDVM 86
Query: 71 LSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHD--LKWLMESMKQPFSTSEVKCLMLQLLE 128
DHP V + DD + +Y + Y ++ LK++ + F + + +++
Sbjct: 87 SRLDHPFFVKLYFTFQDD-EKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFYTAEIVS 143
Query: 129 GVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTS--LVVTLWYRAP 186
++YLH ++HRDLK N+LLN ++I DFG ++ K + V T Y +P
Sbjct: 144 ALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 203
Query: 187 ELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLS 246
ELL K + D+W++GCI+ +L+A P F E KI K E +P
Sbjct: 204 ELLT-EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR 262
Query: 247 EL 248
+L
Sbjct: 263 DL 264
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 116/242 (47%), Gaps = 15/242 (6%)
Query: 11 FEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINIL 70
F+F K+ + EG++ V AR+ + A+K ++ KE+ + Y RE +++
Sbjct: 39 FKFGKI--LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPY-----VTRERDVM 91
Query: 71 LSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHD--LKWLMESMKQPFSTSEVKCLMLQLLE 128
DHP V + DD + +Y + Y ++ LK++ + F + + +++
Sbjct: 92 SRLDHPFFVKLYFCFQDD-EKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFYTAEIVS 148
Query: 129 GVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTS--LVVTLWYRAP 186
++YLH ++HRDLK N+LLN ++I DFG ++ K + V T Y +P
Sbjct: 149 ALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 208
Query: 187 ELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLS 246
ELL K + D+W++GCI+ +L+A P F E KI K E +P
Sbjct: 209 ELLT-EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR 267
Query: 247 EL 248
+L
Sbjct: 268 DL 269
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 116/242 (47%), Gaps = 15/242 (6%)
Query: 11 FEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINIL 70
F+F K+ + EG++ V AR+ + A+K ++ KE+ + Y RE +++
Sbjct: 9 FKFGKI--LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPY-----VTRERDVM 61
Query: 71 LSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHD--LKWLMESMKQPFSTSEVKCLMLQLLE 128
DHP V + DD + +Y + Y ++ LK++ + F + + +++
Sbjct: 62 SRLDHPFFVKLYFTFQDD-EKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFYTAEIVS 118
Query: 129 GVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTS--LVVTLWYRAP 186
++YLH ++HRDLK N+LLN ++I DFG ++ K + V T Y +P
Sbjct: 119 ALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 178
Query: 187 ELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLS 246
ELL K + D+W++GCI+ +L+A P F E KI K E +P
Sbjct: 179 ELLT-EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR 237
Query: 247 EL 248
+L
Sbjct: 238 DL 239
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 116/242 (47%), Gaps = 15/242 (6%)
Query: 11 FEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINIL 70
F+F K+ + EG++ V AR+ + A+K ++ KE+ + Y RE +++
Sbjct: 32 FKFGKI--LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPY-----VTRERDVM 84
Query: 71 LSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHD--LKWLMESMKQPFSTSEVKCLMLQLLE 128
DHP V + DD + +Y + Y ++ LK++ + F + + +++
Sbjct: 85 SRLDHPFFVKLYFTFQDD-EKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFYTAEIVS 141
Query: 129 GVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTS--LVVTLWYRAP 186
++YLH ++HRDLK N+LLN ++I DFG ++ K + V T Y +P
Sbjct: 142 ALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 201
Query: 187 ELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLS 246
ELL K + D+W++GCI+ +L+A P F E KI K E +P
Sbjct: 202 ELLT-EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR 260
Query: 247 EL 248
+L
Sbjct: 261 DL 262
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 111/212 (52%), Gaps = 18/212 (8%)
Query: 9 SVFEFEKLNKISEGTYGIVYRARDKKSGE---IVALKKVKMNVGRKEDCLEYGFPISSLR 65
S + EK+ I G +G V R K G+ VA+K +K K+ F L
Sbjct: 8 SCIKIEKV--IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQ---RRDF----LS 58
Query: 66 EINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEH-DLKWLMESMKQPFSTSEVKCLML 124
E +I+ FDHP+I++++ VV V ++ EYME+ L + F+ ++ ++
Sbjct: 59 EASIMGQFDHPNIIHLEGVVTK-CKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLR 117
Query: 125 QLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQY-GSPLKPYTSL--VVTL 181
+ G+KYL D +HRDL N+L+N+ V K+ DFGMSR P YT+ + +
Sbjct: 118 GIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPI 177
Query: 182 WYRAPELLLGAKKYSTAVDMWSVGCIMAELLA 213
+ APE + +K+++A D+WS G +M E+++
Sbjct: 178 RWTAPE-AIAYRKFTSASDVWSYGIVMWEVMS 208
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 107/215 (49%), Gaps = 26/215 (12%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVG---RKEDCLEYGFPISSLREINI 69
+E ++ G +G V R + +GE VA+K+ + + R+ CLE I I
Sbjct: 17 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLE----------IQI 66
Query: 70 LLSFDHPSIVNVKEV-----VMDDHDSVYMVMEYMEH-DLKWLMESMKQPFSTSE--VKC 121
+ +HP++V+ +EV + +D + MEY E DL+ + + E ++
Sbjct: 67 MKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRT 126
Query: 122 LMLQLLEGVKYLHDNWVLHRDLKTSNLLLN---NQGVLKICDFGMSRQYGSPLKPYTSLV 178
L+ + ++YLH+N ++HRDLK N++L + + KI D G +++ + T V
Sbjct: 127 LLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQG-ELCTEFV 185
Query: 179 VTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA 213
TL Y APE LL KKY+ VD WS G + E +
Sbjct: 186 GTLQYLAPE-LLEQKKYTVTVDYWSFGTLAFECIT 219
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 110/207 (53%), Gaps = 16/207 (7%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILL 71
+FEK++++ G G+V++ K SG ++A K + + + + +RE+ +L
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI-------KPAIRNQIIRELQVLH 59
Query: 72 SFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSE--VKCLMLQLLEG 129
+ P IV D + + + ME+M D L + +K+ E + + + +++G
Sbjct: 60 ECNSPYIVGFYGAFYSDGE-ISICMEHM--DGGSLDQVLKKAGRIPEQILGKVSIAVIKG 116
Query: 130 VKYLHD-NWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPEL 188
+ YL + + ++HRD+K SN+L+N++G +K+CDFG+S Q + S V T Y +PE
Sbjct: 117 LTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA--NSFVGTRSYMSPER 174
Query: 189 LLGAKKYSTAVDMWSVGCIMAELLAKK 215
L G YS D+WS+G + E+ +
Sbjct: 175 LQGT-HYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 110/207 (53%), Gaps = 16/207 (7%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILL 71
+FEK++++ G G+V++ K SG ++A K + + + + +RE+ +L
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI-------KPAIRNQIIRELQVLH 59
Query: 72 SFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSE--VKCLMLQLLEG 129
+ P IV D + + + ME+M D L + +K+ E + + + +++G
Sbjct: 60 ECNSPYIVGFYGAFYSDGE-ISICMEHM--DGGSLDQVLKKAGRIPEQILGKVSIAVIKG 116
Query: 130 VKYLHD-NWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPEL 188
+ YL + + ++HRD+K SN+L+N++G +K+CDFG+S Q + S V T Y +PE
Sbjct: 117 LTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA--NSFVGTRSYMSPER 174
Query: 189 LLGAKKYSTAVDMWSVGCIMAELLAKK 215
L G YS D+WS+G + E+ +
Sbjct: 175 LQGT-HYSVQSDIWSMGLSLVEMAVGR 200
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 116/242 (47%), Gaps = 15/242 (6%)
Query: 11 FEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINIL 70
F+F K+ + EG++ V AR+ + A+K ++ KE+ + Y RE +++
Sbjct: 32 FKFGKI--LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPY-----VTRERDVM 84
Query: 71 LSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHD--LKWLMESMKQPFSTSEVKCLMLQLLE 128
DHP V + DD + +Y + Y ++ LK++ + F + + +++
Sbjct: 85 SRLDHPFFVKLYFTFQDD-EKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFYTAEIVS 141
Query: 129 GVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTS--LVVTLWYRAP 186
++YLH ++HRDLK N+LLN ++I DFG ++ K + V T Y +P
Sbjct: 142 ALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 201
Query: 187 ELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLS 246
ELL K + D+W++GCI+ +L+A P F E KI K E +P
Sbjct: 202 ELLT-EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR 260
Query: 247 EL 248
+L
Sbjct: 261 DL 262
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 107/215 (49%), Gaps = 26/215 (12%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVG---RKEDCLEYGFPISSLREINI 69
+E ++ G +G V R + +GE VA+K+ + + R+ CLE I I
Sbjct: 16 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLE----------IQI 65
Query: 70 LLSFDHPSIVNVKEV-----VMDDHDSVYMVMEYMEH-DLKWLMESMKQPFSTSE--VKC 121
+ +HP++V+ +EV + +D + MEY E DL+ + + E ++
Sbjct: 66 MKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRT 125
Query: 122 LMLQLLEGVKYLHDNWVLHRDLKTSNLLLN---NQGVLKICDFGMSRQYGSPLKPYTSLV 178
L+ + ++YLH+N ++HRDLK N++L + + KI D G +++ + T V
Sbjct: 126 LLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQG-ELCTEFV 184
Query: 179 VTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA 213
TL Y APE LL KKY+ VD WS G + E +
Sbjct: 185 GTLQYLAPE-LLEQKKYTVTVDYWSFGTLAFECIT 218
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 138/318 (43%), Gaps = 48/318 (15%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYG-FPISSLREINILL 71
+E + G +V R K + + A+K + + G E ++L+E++IL
Sbjct: 19 YEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILR 78
Query: 72 SFD-HPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGV 130
HP+I+ +K+ + + ++V + M+ + + K S E + +M LLE +
Sbjct: 79 KVSGHPNIIQLKDT-YETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVI 137
Query: 131 KYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLL 190
LH ++HRDLK N+LL++ +K+ DFG S Q P + S+ T Y APE++
Sbjct: 138 CALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQL-DPGEKLRSVCGTPSYLAPEIIE 196
Query: 191 GAKK-----YSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGL 245
+ Y VDMWS G IM LLA P F
Sbjct: 197 CSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF--------------------------- 229
Query: 246 SELPGAKANFAKQPYNLLRKRFPAASFTGSPV---LSESGFDLLNRLLTYDPEKRITVDD 302
+ ++ +LR GSP S++ DL++R L P+KR T ++
Sbjct: 230 ---------WHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEE 280
Query: 303 ALNHYWFHEVPLPKSKDF 320
AL H +F + + + + F
Sbjct: 281 ALAHPFFQQYVVEEVRHF 298
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 111/212 (52%), Gaps = 18/212 (8%)
Query: 9 SVFEFEKLNKISEGTYGIVYRARDKKSGE---IVALKKVKMNVGRKEDCLEYGFPISSLR 65
S + EK+ I G +G V R K G+ VA+K +K K+ F L
Sbjct: 14 SCIKIEKV--IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQ---RRDF----LS 64
Query: 66 EINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEH-DLKWLMESMKQPFSTSEVKCLML 124
E +I+ FDHP+I++++ VV V ++ EYME+ L + F+ ++ ++
Sbjct: 65 EASIMGQFDHPNIIHLEGVVTK-CKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLR 123
Query: 125 QLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQY-GSPLKPYTSL--VVTL 181
+ G+KYL D +HRDL N+L+N+ V K+ DFGMSR P YT+ + +
Sbjct: 124 GIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPI 183
Query: 182 WYRAPELLLGAKKYSTAVDMWSVGCIMAELLA 213
+ APE + +K+++A D+WS G +M E+++
Sbjct: 184 RWTAPE-AIAYRKFTSASDVWSYGIVMWEVMS 214
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 107/237 (45%), Gaps = 36/237 (15%)
Query: 78 IVNVKEVVMDDHDSVYMVMEYMEHD--LKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHD 135
IV+V E + + +VME ++ + + Q F+ E +M + E ++YLH
Sbjct: 76 IVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS 135
Query: 136 NWVLHRDLKTSNLLLNNQ---GVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGA 192
+ HRD+K NLL ++ +LK+ DFG +++ S T+ T +Y APE +LG
Sbjct: 136 INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSH-NSLTTPCYTPYYVAPE-VLGP 193
Query: 193 KKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGAK 252
+KY + DMWS+G IM LL P F GL+ PG K
Sbjct: 194 EKYDKSCDMWSLGVIMYILLCGYPPFYSNH---------------------GLAISPGMK 232
Query: 253 ANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWF 309
Y FP ++ +SE L+ LL +P +R+T+ + +NH W
Sbjct: 233 TRIRMGQYE-----FPNPEWSE---VSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 281
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 107/237 (45%), Gaps = 36/237 (15%)
Query: 78 IVNVKEVVMDDHDSVYMVMEYMEHD--LKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHD 135
IV+V E + + +VME ++ + + Q F+ E +M + E ++YLH
Sbjct: 90 IVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS 149
Query: 136 NWVLHRDLKTSNLLLNNQ---GVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGA 192
+ HRD+K NLL ++ +LK+ DFG +++ S T+ T +Y APE +LG
Sbjct: 150 INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSH-NSLTTPCYTPYYVAPE-VLGP 207
Query: 193 KKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGAK 252
+KY + DMWS+G IM LL P F GL+ PG K
Sbjct: 208 EKYDKSCDMWSLGVIMYILLCGYPPFYSNH---------------------GLAISPGMK 246
Query: 253 ANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWF 309
Y FP ++ +SE L+ LL +P +R+T+ + +NH W
Sbjct: 247 TRIRMGQYE-----FPNPEWSE---VSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 295
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 107/237 (45%), Gaps = 36/237 (15%)
Query: 78 IVNVKEVVMDDHDSVYMVMEYMEHD--LKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHD 135
IV+V E + + +VME ++ + + Q F+ E +M + E ++YLH
Sbjct: 80 IVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS 139
Query: 136 NWVLHRDLKTSNLLLNNQ---GVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGA 192
+ HRD+K NLL ++ +LK+ DFG +++ S T+ T +Y APE +LG
Sbjct: 140 INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSH-NSLTTPCYTPYYVAPE-VLGP 197
Query: 193 KKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGAK 252
+KY + DMWS+G IM LL P F GL+ PG K
Sbjct: 198 EKYDKSCDMWSLGVIMYILLCGYPPFYSNH---------------------GLAISPGMK 236
Query: 253 ANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWF 309
Y FP ++ +SE L+ LL +P +R+T+ + +NH W
Sbjct: 237 TRIRMGQYE-----FPNPEWSE---VSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 285
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 107/237 (45%), Gaps = 36/237 (15%)
Query: 78 IVNVKEVVMDDHDSVYMVMEYMEHD--LKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHD 135
IV+V E + + +VME ++ + + Q F+ E +M + E ++YLH
Sbjct: 75 IVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS 134
Query: 136 NWVLHRDLKTSNLLLNNQ---GVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGA 192
+ HRD+K NLL ++ +LK+ DFG +++ S T+ T +Y APE +LG
Sbjct: 135 INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSH-NSLTTPCYTPYYVAPE-VLGP 192
Query: 193 KKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGAK 252
+KY + DMWS+G IM LL P F GL+ PG K
Sbjct: 193 EKYDKSCDMWSLGVIMYILLCGYPPFYSNH---------------------GLAISPGMK 231
Query: 253 ANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWF 309
Y FP ++ +SE L+ LL +P +R+T+ + +NH W
Sbjct: 232 TRIRMGQYE-----FPNPEWSE---VSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 280
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 116/242 (47%), Gaps = 15/242 (6%)
Query: 11 FEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINIL 70
F+F K+ + EG++ V AR+ + A+K ++ KE+ + Y RE +++
Sbjct: 16 FKFGKI--LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPY-----VTRERDVM 68
Query: 71 LSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHD--LKWLMESMKQPFSTSEVKCLMLQLLE 128
DHP V + DD + +Y + Y ++ LK++ + F + + +++
Sbjct: 69 SRLDHPFFVKLYFTFQDD-EKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFYTAEIVS 125
Query: 129 GVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTS--LVVTLWYRAP 186
++YLH ++HRDLK N+LLN ++I DFG ++ K + V T Y +P
Sbjct: 126 ALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 185
Query: 187 ELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLS 246
ELL K + D+W++GCI+ +L+A P F E KI K E +P
Sbjct: 186 ELLT-EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR 244
Query: 247 EL 248
+L
Sbjct: 245 DL 246
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 107/237 (45%), Gaps = 36/237 (15%)
Query: 78 IVNVKEVVMDDHDSVYMVMEYMEHD--LKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHD 135
IV+V E + + +VME ++ + + Q F+ E +M + E ++YLH
Sbjct: 74 IVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS 133
Query: 136 NWVLHRDLKTSNLLLNNQ---GVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGA 192
+ HRD+K NLL ++ +LK+ DFG +++ S T+ T +Y APE +LG
Sbjct: 134 INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSH-NSLTTPCYTPYYVAPE-VLGP 191
Query: 193 KKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGAK 252
+KY + DMWS+G IM LL P F GL+ PG K
Sbjct: 192 EKYDKSCDMWSLGVIMYILLCGYPPFYSNH---------------------GLAISPGMK 230
Query: 253 ANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWF 309
Y FP ++ +SE L+ LL +P +R+T+ + +NH W
Sbjct: 231 TRIRMGQYE-----FPNPEWSE---VSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 279
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 107/237 (45%), Gaps = 36/237 (15%)
Query: 78 IVNVKEVVMDDHDSVYMVMEYMEHD--LKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHD 135
IV+V E + + +VME ++ + + Q F+ E +M + E ++YLH
Sbjct: 82 IVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS 141
Query: 136 NWVLHRDLKTSNLLLNNQ---GVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGA 192
+ HRD+K NLL ++ +LK+ DFG +++ S T+ T +Y APE +LG
Sbjct: 142 INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSH-NSLTTPCYTPYYVAPE-VLGP 199
Query: 193 KKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGAK 252
+KY + DMWS+G IM LL P F GL+ PG K
Sbjct: 200 EKYDKSCDMWSLGVIMYILLCGYPPFYSNH---------------------GLAISPGMK 238
Query: 253 ANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWF 309
Y FP ++ +SE L+ LL +P +R+T+ + +NH W
Sbjct: 239 TRIRMGQYE-----FPNPEWSE---VSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 287
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 107/237 (45%), Gaps = 36/237 (15%)
Query: 78 IVNVKEVVMDDHDSVYMVMEYMEHD--LKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHD 135
IV+V E + + +VME ++ + + Q F+ E +M + E ++YLH
Sbjct: 120 IVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS 179
Query: 136 NWVLHRDLKTSNLLLNNQ---GVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGA 192
+ HRD+K NLL ++ +LK+ DFG +++ S T+ T +Y APE +LG
Sbjct: 180 INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSH-NSLTTPCYTPYYVAPE-VLGP 237
Query: 193 KKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGAK 252
+KY + DMWS+G IM LL P F GL+ PG K
Sbjct: 238 EKYDKSCDMWSLGVIMYILLCGYPPFYSNH---------------------GLAISPGMK 276
Query: 253 ANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWF 309
Y FP ++ +SE L+ LL +P +R+T+ + +NH W
Sbjct: 277 TRIRMGQYE-----FPNPEWSE---VSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 325
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 116/242 (47%), Gaps = 15/242 (6%)
Query: 11 FEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINIL 70
F+F K+ + EG++ V AR+ + A+K ++ KE+ + Y RE +++
Sbjct: 31 FKFGKI--LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPY-----VTRERDVM 83
Query: 71 LSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHD--LKWLMESMKQPFSTSEVKCLMLQLLE 128
DHP V + DD + +Y + Y ++ LK++ + F + + +++
Sbjct: 84 SRLDHPFFVKLYFTFQDD-EKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFYTAEIVS 140
Query: 129 GVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTS--LVVTLWYRAP 186
++YLH ++HRDLK N+LLN ++I DFG ++ K + V T Y +P
Sbjct: 141 ALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 200
Query: 187 ELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLS 246
ELL K + D+W++GCI+ +L+A P F E KI K E +P
Sbjct: 201 ELLT-EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR 259
Query: 247 EL 248
+L
Sbjct: 260 DL 261
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 107/237 (45%), Gaps = 36/237 (15%)
Query: 78 IVNVKEVVMDDHDSVYMVMEYMEHD--LKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHD 135
IV+V E + + +VME ++ + + Q F+ E +M + E ++YLH
Sbjct: 126 IVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS 185
Query: 136 NWVLHRDLKTSNLLLNNQ---GVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGA 192
+ HRD+K NLL ++ +LK+ DFG +++ S T+ T +Y APE +LG
Sbjct: 186 INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSH-NSLTTPCYTPYYVAPE-VLGP 243
Query: 193 KKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGAK 252
+KY + DMWS+G IM LL P F GL+ PG K
Sbjct: 244 EKYDKSCDMWSLGVIMYILLCGYPPFYSNH---------------------GLAISPGMK 282
Query: 253 ANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWF 309
Y FP ++ +SE L+ LL +P +R+T+ + +NH W
Sbjct: 283 TRIRMGQYE-----FPNPEWSE---VSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 331
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 107/237 (45%), Gaps = 36/237 (15%)
Query: 78 IVNVKEVVMDDHDSVYMVMEYMEHD--LKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHD 135
IV+V E + + +VME ++ + + Q F+ E +M + E ++YLH
Sbjct: 81 IVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS 140
Query: 136 NWVLHRDLKTSNLLLNNQ---GVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGA 192
+ HRD+K NLL ++ +LK+ DFG +++ S T+ T +Y APE +LG
Sbjct: 141 INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSH-NSLTTPCYTPYYVAPE-VLGP 198
Query: 193 KKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGAK 252
+KY + DMWS+G IM LL P F GL+ PG K
Sbjct: 199 EKYDKSCDMWSLGVIMYILLCGYPPFYSNH---------------------GLAISPGMK 237
Query: 253 ANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWF 309
Y FP ++ +SE L+ LL +P +R+T+ + +NH W
Sbjct: 238 TRIRMGQYE-----FPNPEWSE---VSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 286
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 107/237 (45%), Gaps = 36/237 (15%)
Query: 78 IVNVKEVVMDDHDSVYMVMEYMEHD--LKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHD 135
IV+V E + + +VME ++ + + Q F+ E +M + E ++YLH
Sbjct: 76 IVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS 135
Query: 136 NWVLHRDLKTSNLLLNNQ---GVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGA 192
+ HRD+K NLL ++ +LK+ DFG +++ S T+ T +Y APE +LG
Sbjct: 136 INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSH-NSLTTPCYTPYYVAPE-VLGP 193
Query: 193 KKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGAK 252
+KY + DMWS+G IM LL P F GL+ PG K
Sbjct: 194 EKYDKSCDMWSLGVIMYILLCGYPPFYSNH---------------------GLAISPGMK 232
Query: 253 ANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWF 309
Y FP ++ +SE L+ LL +P +R+T+ + +NH W
Sbjct: 233 TRIRMGQYE-----FPNPEWSE---VSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 281
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 117/295 (39%), Gaps = 44/295 (14%)
Query: 17 NKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHP 76
+ + GT+G V + +G VA+K + R D + REI L F HP
Sbjct: 17 DTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVG-----KIKREIQNLKLFRHP 71
Query: 77 SIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDN 136
I+ + +V+ D +MVMEY+ + E + L Q+L V Y H +
Sbjct: 72 HIIKLYQVISTPTD-FFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRH 130
Query: 137 WVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGAKKYS 196
V+HRDLK N+LL+ KI DFG+S TS + Y APE++ G
Sbjct: 131 MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTS-CGSPNYAAPEVISGRLYAG 189
Query: 197 TAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGAKANFA 256
VD+WS G I+ LL GT LP F
Sbjct: 190 PEVDIWSCGVILYALLC------GT--------------------------LP-----FD 212
Query: 257 KQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHE 311
+ L K+ F L+ S LL +L DP KR T+ D H WF +
Sbjct: 213 DEHVPTLFKKIRGGVFYIPEYLNRSVATLLMHMLQVDPLKRATIKDIREHEWFKQ 267
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 113/219 (51%), Gaps = 8/219 (3%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILL 71
+F+ L I G+Y V R KK+ I A+K VK + ++ +++ + + + +
Sbjct: 10 DFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDW---VQTEKHVFEQA 66
Query: 72 SFDHPSIVNVKEVVMDDHDSVYMVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEGV 130
S +HP +V + + ++ V+EY+ DL + M+ ++ + ++ +
Sbjct: 67 S-NHPFLVGLHSCFQTES-RLFFVIEYVNGGDLMFHMQRQRK-LPEEHARFYSAEISLAL 123
Query: 131 KYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLL 190
YLH+ +++RDLK N+LL+++G +K+ D+GM ++ P + T Y APE+L
Sbjct: 124 NYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILR 183
Query: 191 GAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDK 229
G + Y +VD W++G +M E++A + F D D+
Sbjct: 184 G-EDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQ 221
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 116/242 (47%), Gaps = 15/242 (6%)
Query: 11 FEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINIL 70
F+F K+ + EG++ V AR+ + A+K ++ KE+ + Y RE +++
Sbjct: 34 FKFGKI--LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPY-----VTRERDVM 86
Query: 71 LSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHD--LKWLMESMKQPFSTSEVKCLMLQLLE 128
DHP V + DD + +Y + Y ++ LK++ + F + + +++
Sbjct: 87 SRLDHPFFVKLYFTFQDD-EKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFYTAEIVS 143
Query: 129 GVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTS--LVVTLWYRAP 186
++YLH ++HRDLK N+LLN ++I DFG ++ K + V T Y +P
Sbjct: 144 ALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 203
Query: 187 ELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLS 246
ELL K + D+W++GCI+ +L+A P F E KI K E +P
Sbjct: 204 ELLT-EKSAXKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEKFFPKAR 262
Query: 247 EL 248
+L
Sbjct: 263 DL 264
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 116/242 (47%), Gaps = 15/242 (6%)
Query: 11 FEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINIL 70
F+F K+ + EG++ V AR+ + A+K ++ KE+ + Y RE +++
Sbjct: 34 FKFGKI--LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPY-----VTRERDVM 86
Query: 71 LSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHD--LKWLMESMKQPFSTSEVKCLMLQLLE 128
DHP V + DD + +Y + Y ++ LK++ + F + + +++
Sbjct: 87 SRLDHPFFVKLYFTFQDD-EKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFYTAEIVS 143
Query: 129 GVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTS--LVVTLWYRAP 186
++YLH ++HRDLK N+LLN ++I DFG ++ K + V T Y +P
Sbjct: 144 ALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 203
Query: 187 ELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLS 246
ELL K + D+W++GCI+ +L+A P F E KI K E +P
Sbjct: 204 ELLT-EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEKFFPKAR 262
Query: 247 EL 248
+L
Sbjct: 263 DL 264
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 113/219 (51%), Gaps = 8/219 (3%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILL 71
+F+ L I G+Y V R KK+ I A+K VK + ++ +++ + + + +
Sbjct: 6 DFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDW---VQTEKHVFEQA 62
Query: 72 SFDHPSIVNVKEVVMDDHDSVYMVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEGV 130
S +HP +V + + ++ V+EY+ DL + M+ ++ + ++ +
Sbjct: 63 S-NHPFLVGLHSCFQTES-RLFFVIEYVNGGDLMFHMQRQRK-LPEEHARFYSAEISLAL 119
Query: 131 KYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLL 190
YLH+ +++RDLK N+LL+++G +K+ D+GM ++ P + T Y APE+L
Sbjct: 120 NYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILR 179
Query: 191 GAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDK 229
G + Y +VD W++G +M E++A + F D D+
Sbjct: 180 G-EDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQ 217
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 131/296 (44%), Gaps = 44/296 (14%)
Query: 18 KISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSL-REINILLSFDHP 76
++ G + IV + R+K +G A K +K R+ G + RE++IL H
Sbjct: 19 ELGSGQFAIVKKCREKSTGLEYAAKFIKK---RQSRASRRGVSREEIEREVSILRQVLHH 75
Query: 77 SIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDN 136
+++ + +V + D V +++E + + + K+ S E + Q+L+GV YLH
Sbjct: 76 NVITLHDVYENRTD-VVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTK 134
Query: 137 WVLHRDLKTSNLLLNNQGV----LKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGA 192
+ H DLK N++L ++ + +K+ DFG++ + ++ + ++ T + APE ++
Sbjct: 135 KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE-FKNIFGTPEFVAPE-IVNY 192
Query: 193 KKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGAK 252
+ DMWS+G I LL+ F G T+ + +
Sbjct: 193 EPLGLEADMWSIGVITYILLSGASPFLGDTKQETL------------------------- 227
Query: 253 ANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYW 308
AN Y+ + F SE D + +LL + KR+T+ +AL H W
Sbjct: 228 ANITSVSYDFDEEFFSHT--------SELAKDFIRKLLVKETRKRLTIQEALRHPW 275
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 133/309 (43%), Gaps = 60/309 (19%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKV--KMNVGRKEDCLEYGFPISSLREINI 69
E++ ++ +G + +V R +G+ A K + K R LE RE I
Sbjct: 5 EYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLE--------REARI 56
Query: 70 LLSFDHPSIVNVKEVVMDDHDSV------YMVMEYMEHDLKWLMESMKQPFSTSEVKCLM 123
HP+IV + HDS+ Y+V + + + ++ +S ++ +
Sbjct: 57 CRLLKHPNIVRL-------HDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCI 109
Query: 124 LQLLEGVKYLHDNWVLHRDLKTSNLLLNNQ---GVLKICDFGMSRQYGSPLKPYTSLVVT 180
Q+LE V + H N ++HRDLK NLLL ++ +K+ DFG++ + + + T
Sbjct: 110 QQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGT 169
Query: 181 LWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTET 240
Y +PE+L Y VDMW+ G I+ LL P F + DQ +++ +
Sbjct: 170 PGYLSPEVLR-KDPYGKPVDMWACGVILYILLVGYPPF---WDEDQ-HRLY-------QQ 217
Query: 241 IWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITV 300
I G + P + + ++ DL+N++LT +P KRIT
Sbjct: 218 IKAGAYDFPSPEWD----------------------TVTPEAKDLINKMLTINPAKRITA 255
Query: 301 DDALNHYWF 309
+AL H W
Sbjct: 256 SEALKHPWI 264
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 106/237 (44%), Gaps = 36/237 (15%)
Query: 78 IVNVKEVVMDDHDSVYMVMEYMEHD--LKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHD 135
IV+V E + + +VME ++ + + Q F+ E +M + E ++YLH
Sbjct: 74 IVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS 133
Query: 136 NWVLHRDLKTSNLLLNNQ---GVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGA 192
+ HRD+K NLL ++ +LK+ DFG +++ S T T +Y APE +LG
Sbjct: 134 INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSH-NSLTEPCYTPYYVAPE-VLGP 191
Query: 193 KKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGAK 252
+KY + DMWS+G IM LL P F GL+ PG K
Sbjct: 192 EKYDKSCDMWSLGVIMYILLCGYPPFYSNH---------------------GLAISPGMK 230
Query: 253 ANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWF 309
Y FP ++ +SE L+ LL +P +R+T+ + +NH W
Sbjct: 231 TRIRMGQYE-----FPNPEWSE---VSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 279
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 131/296 (44%), Gaps = 44/296 (14%)
Query: 18 KISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSL-REINILLSFDHP 76
++ G + IV + R+K +G A K +K R+ G + RE++IL H
Sbjct: 19 ELGSGQFAIVKKCREKSTGLEYAAKFIK---KRQSRASRRGVSREEIEREVSILRQVLHH 75
Query: 77 SIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDN 136
+++ + +V + D V +++E + + + K+ S E + Q+L+GV YLH
Sbjct: 76 NVITLHDVYENRTD-VVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTK 134
Query: 137 WVLHRDLKTSNLLLNNQGV----LKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGA 192
+ H DLK N++L ++ + +K+ DFG++ + ++ + ++ T + APE ++
Sbjct: 135 KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE-FKNIFGTPEFVAPE-IVNY 192
Query: 193 KKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGAK 252
+ DMWS+G I LL+ F G T+ + +
Sbjct: 193 EPLGLEADMWSIGVITYILLSGASPFLGDTKQETL------------------------- 227
Query: 253 ANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYW 308
AN Y+ + F SE D + +LL + KR+T+ +AL H W
Sbjct: 228 ANITAVSYDFDEEFFSQT--------SELAKDFIRKLLVKETRKRLTIQEALRHPW 275
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 114/219 (52%), Gaps = 8/219 (3%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILL 71
+F+ L I G+Y V R KK+ I A++ VK + ++ +++ + + + +
Sbjct: 53 DFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDW---VQTEKHVFEQA 109
Query: 72 SFDHPSIVNVKEVVMDDHDSVYMVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEGV 130
S +HP +V + + ++ V+EY+ DL + M+ ++ + ++ +
Sbjct: 110 S-NHPFLVGLHSCFQTES-RLFFVIEYVNGGDLMFHMQRQRK-LPEEHARFYSAEISLAL 166
Query: 131 KYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLL 190
YLH+ +++RDLK N+LL+++G +K+ D+GM ++ P ++ T Y APE+L
Sbjct: 167 NYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILR 226
Query: 191 GAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDK 229
G + Y +VD W++G +M E++A + F D D+
Sbjct: 227 G-EDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQ 264
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 133/309 (43%), Gaps = 60/309 (19%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKV--KMNVGRKEDCLEYGFPISSLREINI 69
E++ ++ +G + +V R +G+ A K + K R LE RE I
Sbjct: 5 EYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLE--------REARI 56
Query: 70 LLSFDHPSIVNVKEVVMDDHDSV------YMVMEYMEHDLKWLMESMKQPFSTSEVKCLM 123
HP+IV + HDS+ Y+V + + + ++ +S ++ +
Sbjct: 57 CRLLKHPNIVRL-------HDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCI 109
Query: 124 LQLLEGVKYLHDNWVLHRDLKTSNLLLNNQ---GVLKICDFGMSRQYGSPLKPYTSLVVT 180
Q+LE V + H N ++HRDLK NLLL ++ +K+ DFG++ + + + T
Sbjct: 110 QQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGT 169
Query: 181 LWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTET 240
Y +PE+L Y VDMW+ G I+ LL P F + DQ +++ +
Sbjct: 170 PGYLSPEVLR-KDPYGKPVDMWACGVILYILLVGYPPF---WDEDQ-HRLY-------QQ 217
Query: 241 IWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITV 300
I G + P + + ++ DL+N++LT +P KRIT
Sbjct: 218 IKAGAYDFPSPEWD----------------------TVTPEAKDLINKMLTINPAKRITA 255
Query: 301 DDALNHYWF 309
+AL H W
Sbjct: 256 SEALKHPWI 264
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 131/296 (44%), Gaps = 44/296 (14%)
Query: 18 KISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSL-REINILLSFDHP 76
++ G + IV + R+K +G A K +K R+ G + RE++IL H
Sbjct: 19 ELGSGQFAIVKKCREKSTGLEYAAKFIK---KRQSRASRRGVSREEIEREVSILRQVLHH 75
Query: 77 SIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDN 136
+++ + +V + D V +++E + + + K+ S E + Q+L+GV YLH
Sbjct: 76 NVITLHDVYENRTD-VVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTK 134
Query: 137 WVLHRDLKTSNLLLNNQGV----LKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGA 192
+ H DLK N++L ++ + +K+ DFG++ + ++ + ++ T + APE ++
Sbjct: 135 KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE-FKNIFGTPEFVAPE-IVNY 192
Query: 193 KKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGAK 252
+ DMWS+G I LL+ F G T+ + +
Sbjct: 193 EPLGLEADMWSIGVITYILLSGASPFLGDTKQETL------------------------- 227
Query: 253 ANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYW 308
AN Y+ + F SE D + +LL + KR+T+ +AL H W
Sbjct: 228 ANITAVSYDFDEEFFSQT--------SELAKDFIRKLLVKETRKRLTIQEALRHPW 275
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 133/296 (44%), Gaps = 44/296 (14%)
Query: 18 KISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSL-REINILLSFDHP 76
++ G + IV + R+K +G A K +K R+ G + RE++IL H
Sbjct: 19 ELGSGQFAIVKKCREKSTGLEYAAKFIK---KRQSRASRRGVSREEIEREVSILRQVLHH 75
Query: 77 SIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDN 136
+++ + +V + D V +++E + + + K+ S E + Q+L+GV YLH
Sbjct: 76 NVITLHDVYENRTD-VVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTK 134
Query: 137 WVLHRDLKTSNLLLNNQGV----LKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGA 192
+ H DLK N++L ++ + +K+ DFG++ + ++ + ++ T + APE ++
Sbjct: 135 KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE-FKNIFGTPEFVAPE-IVNY 192
Query: 193 KKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGAK 252
+ DMWS+G I LL+ F G T+ + +
Sbjct: 193 EPLGLEADMWSIGVITYILLSGASPFLGDTKQETL------------------------- 227
Query: 253 ANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYW 308
AN Y+ F F+ + SE D + +LL + KR+T+ +AL H W
Sbjct: 228 ANITSVSYD-----FDEEFFSHT---SELAKDFIRKLLVKETRKRLTIQEALRHPW 275
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 109/207 (52%), Gaps = 16/207 (7%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILL 71
+FEK++++ G G+V++ K SG ++A K + + + + +RE+ +L
Sbjct: 10 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI-------KPAIRNQIIRELQVLH 62
Query: 72 SFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSE--VKCLMLQLLEG 129
+ P IV D + + + ME+M D L + +K+ E + + + +++G
Sbjct: 63 ECNSPYIVGFYGAFYSDGE-ISICMEHM--DGGSLDQVLKKAGRIPEQILGKVSIAVIKG 119
Query: 130 VKYLHD-NWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPEL 188
+ YL + + ++HRD+K SN+L+N++G +K+CDFG+S Q + V T Y +PE
Sbjct: 120 LTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMA--NEFVGTRSYMSPER 177
Query: 189 LLGAKKYSTAVDMWSVGCIMAELLAKK 215
L G YS D+WS+G + E+ +
Sbjct: 178 LQGT-HYSVQSDIWSMGLSLVEMAVGR 203
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 131/296 (44%), Gaps = 44/296 (14%)
Query: 18 KISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSL-REINILLSFDHP 76
++ G + IV + R+K +G A K +K R+ G + RE++IL H
Sbjct: 19 ELGSGQFAIVKKCREKSTGLEYAAKFIK---KRQSRASRRGVSREEIEREVSILRQVLHH 75
Query: 77 SIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDN 136
+++ + +V + D V +++E + + + K+ S E + Q+L+GV YLH
Sbjct: 76 NVITLHDVYENRTD-VVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTK 134
Query: 137 WVLHRDLKTSNLLLNNQGV----LKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGA 192
+ H DLK N++L ++ + +K+ DFG++ + ++ + ++ T + APE ++
Sbjct: 135 KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE-FKNIFGTPEFVAPE-IVNY 192
Query: 193 KKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGAK 252
+ DMWS+G I LL+ F G T+ + +
Sbjct: 193 EPLGLEADMWSIGVITYILLSGASPFLGDTKQETL------------------------- 227
Query: 253 ANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYW 308
AN Y+ + F SE D + +LL + KR+T+ +AL H W
Sbjct: 228 ANITSVSYDFDEEFFSHT--------SELAKDFIRKLLVKETRKRLTIQEALRHPW 275
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 113/219 (51%), Gaps = 8/219 (3%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILL 71
+F+ L I G+Y V R KK+ I A+K VK + ++ +++ + + + +
Sbjct: 21 DFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDW---VQTEKHVFEQA 77
Query: 72 SFDHPSIVNVKEVVMDDHDSVYMVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEGV 130
S +HP +V + + ++ V+EY+ DL + M+ ++ + ++ +
Sbjct: 78 S-NHPFLVGLHSCFQTES-RLFFVIEYVNGGDLMFHMQRQRK-LPEEHARFYSAEISLAL 134
Query: 131 KYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLL 190
YLH+ +++RDLK N+LL+++G +K+ D+GM ++ P + T Y APE+L
Sbjct: 135 NYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILR 194
Query: 191 GAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDK 229
G + Y +VD W++G +M E++A + F D D+
Sbjct: 195 G-EDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQ 232
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 91/343 (26%), Positives = 142/343 (41%), Gaps = 72/343 (20%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSG-EIVALKKVK-----MNVGRKE----DCLEYGFPIS 62
+E ++ + EG +G V D K+G VA+K VK R E + L P S
Sbjct: 16 YEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNS 75
Query: 63 SLREINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYME-HDLKWLMESMKQPFSTSEVKC 121
+ R + +L F+H H + +V E + ++ E+ PF ++
Sbjct: 76 TFRCVQMLEWFEH-------------HGHICIVFELLGLSTYDFIKENGFLPFRLDHIRK 122
Query: 122 LMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGV-------------------LKICDFG 162
+ Q+ + V +LH N + H DLK N+L +K+ DFG
Sbjct: 123 MAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFG 182
Query: 163 MSRQYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTT 222
S Y + +++LV YRAPE++L A +S D+WS+GCI+ E +F
Sbjct: 183 -SATYDD--EHHSTLVXXRHYRAPEVIL-ALGWSQPCDVWSIGCILIEYYLGFTVFPTHD 238
Query: 223 EVDQIDKIFKTLG-TPTETI---------------WPGLSELPGAKANFAKQPYNLLRKR 266
+ + + + LG P I W S G + A +P K
Sbjct: 239 SKEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSS-AGRYVSRACKPL----KE 293
Query: 267 FPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWF 309
F V E FDL+ ++L YDP KRIT+ +AL H +F
Sbjct: 294 F----MLSQDVEHERLFDLIQKMLEYDPAKRITLREALKHPFF 332
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 138/308 (44%), Gaps = 54/308 (17%)
Query: 9 SVFEF-EKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSL--- 64
SV+++ + L ++ G +G+V+R +K +G + K + +P+
Sbjct: 48 SVYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINT-----------PYPLDKYTVK 96
Query: 65 REINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEH-DLKWLMESMKQPFSTSEVKCLM 123
EI+I+ HP ++N+ + D ++ V +++E++ +L + + S +EV M
Sbjct: 97 NEISIMNQLHHPKLINLHDAFEDKYEMV-LILEFLSGGELFDRIAAEDYKMSEAEVINYM 155
Query: 124 LQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGV--LKICDFGMSRQYGSPLKPYTSLVVTL 181
Q EG+K++H++ ++H D+K N++ + +KI DFG++ + +P + T
Sbjct: 156 RQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKL-NPDEIVKVTTATA 214
Query: 182 WYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETI 241
+ APE ++ + DMW++G + LL+ F+G +++ TL
Sbjct: 215 EFAAPE-IVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLE-------TLQNVKRCD 266
Query: 242 WPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVD 301
W F +F+ +S D + LL +P KR+TV
Sbjct: 267 W-----------------------EFDEDAFSS---VSPEAKDFIKNLLQKEPRKRLTVH 300
Query: 302 DALNHYWF 309
DAL H W
Sbjct: 301 DALEHPWL 308
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 115/242 (47%), Gaps = 15/242 (6%)
Query: 11 FEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINIL 70
F+F K+ + EG++ AR+ + A+K ++ KE+ + Y RE +++
Sbjct: 32 FKFGKI--LGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPY-----VTRERDVM 84
Query: 71 LSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHD--LKWLMESMKQPFSTSEVKCLMLQLLE 128
DHP V + DD + +Y + Y ++ LK++ + F + + +++
Sbjct: 85 SRLDHPFFVKLYFTFQDD-EKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFYTAEIVS 141
Query: 129 GVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTS--LVVTLWYRAP 186
++YLH ++HRDLK N+LLN ++I DFG ++ K + V T Y +P
Sbjct: 142 ALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 201
Query: 187 ELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLS 246
ELL K + D+W++GCI+ +L+A P F E KI K E +P
Sbjct: 202 ELLT-EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR 260
Query: 247 EL 248
+L
Sbjct: 261 DL 262
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 118/297 (39%), Gaps = 48/297 (16%)
Query: 17 NKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHP 76
+ + GT+G V + +G VA+K + R D + REI L F HP
Sbjct: 17 DTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVG-----KIKREIQNLKLFRHP 71
Query: 77 SIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDN 136
I+ + +V+ D +MVMEY+ + E + L Q+L V Y H +
Sbjct: 72 HIIKLYQVISTPTD-FFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRH 130
Query: 137 WVLHRDLKTSNLLLNNQGVLKICDFGMSRQY--GSPLKPYTSLVVTLWYRAPELLLGAKK 194
V+HRDLK N+LL+ KI DFG+S G L+ + Y APE++ G
Sbjct: 131 MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDSCG---SPNYAAPEVISGRLY 187
Query: 195 YSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGAKAN 254
VD+WS G I+ LL GT LP
Sbjct: 188 AGPEVDIWSCGVILYALLC------GT--------------------------LP----- 210
Query: 255 FAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHE 311
F + L K+ F L+ S LL +L DP KR T+ D H WF +
Sbjct: 211 FDDEHVPTLFKKIRGGVFYIPEYLNRSVATLLMHMLQVDPLKRATIKDIREHEWFKQ 267
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 137/318 (43%), Gaps = 48/318 (15%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYG-FPISSLREINILL 71
+E + G +V R K + + A+K + + G E ++L+E++IL
Sbjct: 19 YEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILR 78
Query: 72 SFD-HPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGV 130
HP+I+ +K+ + + ++V + M+ + + K S E + +M LLE +
Sbjct: 79 KVSGHPNIIQLKDT-YETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVI 137
Query: 131 KYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLL 190
LH ++HRDLK N+LL++ +K+ DFG S Q P + + T Y APE++
Sbjct: 138 CALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQL-DPGEKLREVCGTPSYLAPEIIE 196
Query: 191 GAKK-----YSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGL 245
+ Y VDMWS G IM LLA P F
Sbjct: 197 CSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF--------------------------- 229
Query: 246 SELPGAKANFAKQPYNLLRKRFPAASFTGSPV---LSESGFDLLNRLLTYDPEKRITVDD 302
+ ++ +LR GSP S++ DL++R L P+KR T ++
Sbjct: 230 ---------WHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEE 280
Query: 303 ALNHYWFHEVPLPKSKDF 320
AL H +F + + + + F
Sbjct: 281 ALAHPFFQQYVVEEVRHF 298
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 103/204 (50%), Gaps = 12/204 (5%)
Query: 27 VYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVM 86
V+ ARD + VA+K ++ ++ R + F + RE + +HP+IV V +
Sbjct: 28 VHLARDLRDHRDVAVKVLRADLAR-----DPSFYLRFRREAQNAAALNHPAIVAVYDTGE 82
Query: 87 DDHDS---VYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDL 143
+ + Y+VMEY++ + + P + ++ + + + H N ++HRD+
Sbjct: 83 AETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDV 142
Query: 144 KTSNLLLNNQGVLKICDFGMSRQY---GSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVD 200
K +N+L++ +K+ DFG++R G+ + +++ T Y +PE G D
Sbjct: 143 KPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARG-DSVDARSD 201
Query: 201 MWSVGCIMAELLAKKPLFSGTTEV 224
++S+GC++ E+L +P F+G + V
Sbjct: 202 VYSLGCVLYEVLTGEPPFTGDSPV 225
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 143/323 (44%), Gaps = 71/323 (21%)
Query: 10 VFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINI 69
V +++ + + EG YG V A ++ + E VA+K V M R DC P + +EI I
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK--RAVDC-----PENIKKEICI 57
Query: 70 LLSFDHPSIVNVKEVVMDDHDSVYMVMEY---------MEHDLKWLMESMKQPFSTSEVK 120
+H ++V + + Y+ +EY +E D+ M +P + +
Sbjct: 58 NKMLNHENVVKFYGHRREGNIQ-YLFLEYCSGGELFDRIEPDI-----GMPEP----DAQ 107
Query: 121 CLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSR--QYGSPLKPYTSLV 178
QL+ GV YLH + HRD+K NLLL+ + LKI DFG++ +Y + + +
Sbjct: 108 RFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMX 167
Query: 179 VTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPT 238
TL Y APELL + ++ VD+WS G ++ +LA
Sbjct: 168 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA------------------------- 202
Query: 239 ETIWPGLSELPGAKANFAKQPYNLLRKR----FPAASFTGSPVLSESGFDLLNRLLTYDP 294
ELP + + + Q Y+ +++ P +P+ LL+++L +P
Sbjct: 203 -------GELPWDQPSDSXQEYSDWKEKKTYLNPWKKIDSAPLA------LLHKILVENP 249
Query: 295 EKRITVDDALNHYWFHEVPLPKS 317
RIT+ D W+++ PL K
Sbjct: 250 SARITIPDIKKDRWYNK-PLKKG 271
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 143/323 (44%), Gaps = 71/323 (21%)
Query: 10 VFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINI 69
V +++ + + EG YG V A ++ + E VA+K V M R DC P + +EI I
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK--RAVDC-----PENIKKEICI 57
Query: 70 LLSFDHPSIVNVKEVVMDDHDSVYMVMEY---------MEHDLKWLMESMKQPFSTSEVK 120
+H ++V + + Y+ +EY +E D+ M +P + +
Sbjct: 58 NKMLNHENVVKFYGHRREGNIQ-YLFLEYCSGGELFDRIEPDI-----GMPEP----DAQ 107
Query: 121 CLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSR--QYGSPLKPYTSLV 178
QL+ GV YLH + HRD+K NLLL+ + LKI DFG++ +Y + + +
Sbjct: 108 RFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC 167
Query: 179 VTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPT 238
TL Y APELL + ++ VD+WS G ++ +LA
Sbjct: 168 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA------------------------- 202
Query: 239 ETIWPGLSELPGAKANFAKQPYNLLRKR----FPAASFTGSPVLSESGFDLLNRLLTYDP 294
ELP + + + Q Y+ +++ P +P+ LL+++L +P
Sbjct: 203 -------GELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA------LLHKILVENP 249
Query: 295 EKRITVDDALNHYWFHEVPLPKS 317
RIT+ D W+++ PL K
Sbjct: 250 SARITIPDIKKDRWYNK-PLKKG 271
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 143/323 (44%), Gaps = 71/323 (21%)
Query: 10 VFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINI 69
V +++ + + EG YG V A ++ + E VA+K V M R DC P + +EI I
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK--RAVDC-----PENIKKEIXI 57
Query: 70 LLSFDHPSIVNVKEVVMDDHDSVYMVMEY---------MEHDLKWLMESMKQPFSTSEVK 120
+H ++V + + Y+ +EY +E D+ M +P + +
Sbjct: 58 NKMLNHENVVKFYGHRREGNIQ-YLFLEYCSGGELFDRIEPDI-----GMPEP----DAQ 107
Query: 121 CLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSR--QYGSPLKPYTSLV 178
QL+ GV YLH + HRD+K NLLL+ + LKI DFG++ +Y + + +
Sbjct: 108 RFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC 167
Query: 179 VTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPT 238
TL Y APELL + ++ VD+WS G ++ +LA
Sbjct: 168 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA------------------------- 202
Query: 239 ETIWPGLSELPGAKANFAKQPYNLLRKR----FPAASFTGSPVLSESGFDLLNRLLTYDP 294
ELP + + + Q Y+ +++ P +P+ LL+++L +P
Sbjct: 203 -------GELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA------LLHKILVENP 249
Query: 295 EKRITVDDALNHYWFHEVPLPKS 317
RIT+ D W+++ PL K
Sbjct: 250 SARITIPDIKKDRWYNK-PLKKG 271
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 112/212 (52%), Gaps = 18/212 (8%)
Query: 9 SVFEFEKLNKISEGTYGIVYRARDKKSGE---IVALKKVKMNVGRKEDCLEYGFPISSLR 65
S + E++ I G +G V R K G+ VA+K +K+ K+ L
Sbjct: 43 SCIKIERV--IGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQR-------RDFLC 93
Query: 66 EINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHD-LKWLMESMKQPFSTSEVKCLML 124
E +I+ FDHP++V+++ VV V +V+E+ME+ L + F+ ++ ++
Sbjct: 94 EASIMGQFDHPNVVHLEGVVTRGK-PVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLR 152
Query: 125 QLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQY-GSPLKPYTSL--VVTL 181
+ G++YL D +HRDL N+L+N+ V K+ DFG+SR P YT+ + +
Sbjct: 153 GIAAGMRYLADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPV 212
Query: 182 WYRAPELLLGAKKYSTAVDMWSVGCIMAELLA 213
+ APE + +K+++A D+WS G +M E+++
Sbjct: 213 RWTAPEAIQ-YRKFTSASDVWSYGIVMWEVMS 243
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 143/323 (44%), Gaps = 71/323 (21%)
Query: 10 VFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINI 69
V +++ + + EG YG V A ++ + E VA+K V M R DC P + +EI I
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK--RAVDC-----PENIKKEICI 58
Query: 70 LLSFDHPSIVNVKEVVMDDHDSVYMVMEY---------MEHDLKWLMESMKQPFSTSEVK 120
+H ++V + + Y+ +EY +E D+ M +P + +
Sbjct: 59 NKMLNHENVVKFYGHRREGNIQ-YLFLEYCSGGELFDRIEPDI-----GMPEP----DAQ 108
Query: 121 CLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSR--QYGSPLKPYTSLV 178
QL+ GV YLH + HRD+K NLLL+ + LKI DFG++ +Y + + +
Sbjct: 109 RFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC 168
Query: 179 VTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPT 238
TL Y APELL + ++ VD+WS G ++ +LA
Sbjct: 169 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA------------------------- 203
Query: 239 ETIWPGLSELPGAKANFAKQPYNLLRKR----FPAASFTGSPVLSESGFDLLNRLLTYDP 294
ELP + + + Q Y+ +++ P +P+ LL+++L +P
Sbjct: 204 -------GELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA------LLHKILVENP 250
Query: 295 EKRITVDDALNHYWFHEVPLPKS 317
RIT+ D W+++ PL K
Sbjct: 251 SARITIPDIKKDRWYNK-PLKKG 272
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 143/323 (44%), Gaps = 71/323 (21%)
Query: 10 VFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINI 69
V +++ + + EG YG V A ++ + E VA+K V M R DC P + +EI I
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK--RAVDC-----PENIKKEIXI 57
Query: 70 LLSFDHPSIVNVKEVVMDDHDSVYMVMEY---------MEHDLKWLMESMKQPFSTSEVK 120
+H ++V + + Y+ +EY +E D+ M +P + +
Sbjct: 58 NKMLNHENVVKFYGHRREGNIQ-YLFLEYCSGGELFDRIEPDI-----GMPEP----DAQ 107
Query: 121 CLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSR--QYGSPLKPYTSLV 178
QL+ GV YLH + HRD+K NLLL+ + LKI DFG++ +Y + + +
Sbjct: 108 RFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMX 167
Query: 179 VTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPT 238
TL Y APELL + ++ VD+WS G ++ +LA
Sbjct: 168 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA------------------------- 202
Query: 239 ETIWPGLSELPGAKANFAKQPYNLLRKR----FPAASFTGSPVLSESGFDLLNRLLTYDP 294
ELP + + + Q Y+ +++ P +P+ LL+++L +P
Sbjct: 203 -------GELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA------LLHKILVENP 249
Query: 295 EKRITVDDALNHYWFHEVPLPKS 317
RIT+ D W+++ PL K
Sbjct: 250 SARITIPDIKKDRWYNK-PLKKG 271
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 143/323 (44%), Gaps = 71/323 (21%)
Query: 10 VFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINI 69
V +++ + + EG YG V A ++ + E VA+K V M R DC P + +EI I
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK--RAVDC-----PENIKKEICI 58
Query: 70 LLSFDHPSIVNVKEVVMDDHDSVYMVMEY---------MEHDLKWLMESMKQPFSTSEVK 120
+H ++V + + Y+ +EY +E D+ M +P + +
Sbjct: 59 NAMLNHENVVKFYGHRREGNIQ-YLFLEYCSGGELFDRIEPDI-----GMPEP----DAQ 108
Query: 121 CLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSR--QYGSPLKPYTSLV 178
QL+ GV YLH + HRD+K NLLL+ + LKI DFG++ +Y + + +
Sbjct: 109 RFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC 168
Query: 179 VTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPT 238
TL Y APELL + ++ VD+WS G ++ +LA
Sbjct: 169 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA------------------------- 203
Query: 239 ETIWPGLSELPGAKANFAKQPYNLLRKR----FPAASFTGSPVLSESGFDLLNRLLTYDP 294
ELP + + + Q Y+ +++ P +P+ LL+++L +P
Sbjct: 204 -------GELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA------LLHKILVENP 250
Query: 295 EKRITVDDALNHYWFHEVPLPKS 317
RIT+ D W+++ PL K
Sbjct: 251 SARITIPDIKKDRWYNK-PLKKG 272
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 143/323 (44%), Gaps = 71/323 (21%)
Query: 10 VFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINI 69
V +++ + + EG YG V A ++ + E VA+K V M R DC P + +EI I
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK--RAVDC-----PENIKKEICI 58
Query: 70 LLSFDHPSIVNVKEVVMDDHDSVYMVMEY---------MEHDLKWLMESMKQPFSTSEVK 120
+H ++V + + Y+ +EY +E D+ M +P + +
Sbjct: 59 NKMLNHENVVKFYGHRREGNIQ-YLFLEYCSGGELFDRIEPDI-----GMPEP----DAQ 108
Query: 121 CLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSR--QYGSPLKPYTSLV 178
QL+ GV YLH + HRD+K NLLL+ + LKI DFG++ +Y + + +
Sbjct: 109 RFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC 168
Query: 179 VTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPT 238
TL Y APELL + ++ VD+WS G ++ +LA
Sbjct: 169 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA------------------------- 203
Query: 239 ETIWPGLSELPGAKANFAKQPYNLLRKR----FPAASFTGSPVLSESGFDLLNRLLTYDP 294
ELP + + + Q Y+ +++ P +P+ LL+++L +P
Sbjct: 204 -------GELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA------LLHKILVENP 250
Query: 295 EKRITVDDALNHYWFHEVPLPKS 317
RIT+ D W+++ PL K
Sbjct: 251 SARITIPDIKKDRWYNK-PLKKG 272
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 143/323 (44%), Gaps = 71/323 (21%)
Query: 10 VFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINI 69
V +++ + + EG YG V A ++ + E VA+K V M R DC P + +EI I
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK--RAVDC-----PENIKKEICI 58
Query: 70 LLSFDHPSIVNVKEVVMDDHDSVYMVMEY---------MEHDLKWLMESMKQPFSTSEVK 120
+H ++V + + Y+ +EY +E D+ M +P + +
Sbjct: 59 NKMLNHENVVKFYGHRREGNIQ-YLFLEYCSGGELFDRIEPDI-----GMPEP----DAQ 108
Query: 121 CLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSR--QYGSPLKPYTSLV 178
QL+ GV YLH + HRD+K NLLL+ + LKI DFG++ +Y + + +
Sbjct: 109 RFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC 168
Query: 179 VTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPT 238
TL Y APELL + ++ VD+WS G ++ +LA
Sbjct: 169 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA------------------------- 203
Query: 239 ETIWPGLSELPGAKANFAKQPYNLLRKR----FPAASFTGSPVLSESGFDLLNRLLTYDP 294
ELP + + + Q Y+ +++ P +P+ LL+++L +P
Sbjct: 204 -------GELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA------LLHKILVENP 250
Query: 295 EKRITVDDALNHYWFHEVPLPKS 317
RIT+ D W+++ PL K
Sbjct: 251 SARITIPDIKKDRWYNK-PLKKG 272
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 143/323 (44%), Gaps = 71/323 (21%)
Query: 10 VFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINI 69
V +++ + + EG YG V A ++ + E VA+K V M R DC P + +EI I
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK--RAVDC-----PENIKKEICI 58
Query: 70 LLSFDHPSIVNVKEVVMDDHDSVYMVMEY---------MEHDLKWLMESMKQPFSTSEVK 120
+H ++V + + Y+ +EY +E D+ M +P + +
Sbjct: 59 NKMLNHENVVKFYGHRREGNIQ-YLFLEYCSGGELFDRIEPDI-----GMPEP----DAQ 108
Query: 121 CLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSR--QYGSPLKPYTSLV 178
QL+ GV YLH + HRD+K NLLL+ + LKI DFG++ +Y + + +
Sbjct: 109 RFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC 168
Query: 179 VTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPT 238
TL Y APELL + ++ VD+WS G ++ +LA
Sbjct: 169 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA------------------------- 203
Query: 239 ETIWPGLSELPGAKANFAKQPYNLLRKR----FPAASFTGSPVLSESGFDLLNRLLTYDP 294
ELP + + + Q Y+ +++ P +P+ LL+++L +P
Sbjct: 204 -------GELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA------LLHKILVENP 250
Query: 295 EKRITVDDALNHYWFHEVPLPKS 317
RIT+ D W+++ PL K
Sbjct: 251 SARITIPDIKKDRWYNK-PLKKG 272
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 143/323 (44%), Gaps = 71/323 (21%)
Query: 10 VFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINI 69
V +++ + + EG YG V A ++ + E VA+K V M R DC P + +EI I
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK--RAVDC-----PENIKKEIXI 58
Query: 70 LLSFDHPSIVNVKEVVMDDHDSVYMVMEY---------MEHDLKWLMESMKQPFSTSEVK 120
+H ++V + + Y+ +EY +E D+ M +P + +
Sbjct: 59 NKMLNHENVVKFYGHRREGNIQ-YLFLEYCSGGELFDRIEPDI-----GMPEP----DAQ 108
Query: 121 CLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSR--QYGSPLKPYTSLV 178
QL+ GV YLH + HRD+K NLLL+ + LKI DFG++ +Y + + +
Sbjct: 109 RFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMX 168
Query: 179 VTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPT 238
TL Y APELL + ++ VD+WS G ++ +LA
Sbjct: 169 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA------------------------- 203
Query: 239 ETIWPGLSELPGAKANFAKQPYNLLRKR----FPAASFTGSPVLSESGFDLLNRLLTYDP 294
ELP + + + Q Y+ +++ P +P+ LL+++L +P
Sbjct: 204 -------GELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA------LLHKILVENP 250
Query: 295 EKRITVDDALNHYWFHEVPLPKS 317
RIT+ D W+++ PL K
Sbjct: 251 SARITIPDIKKDRWYNK-PLKKG 272
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 143/323 (44%), Gaps = 71/323 (21%)
Query: 10 VFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINI 69
V +++ + + EG YG V A ++ + E VA+K V M R DC P + +EI I
Sbjct: 4 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK--RAVDC-----PENIKKEICI 56
Query: 70 LLSFDHPSIVNVKEVVMDDHDSVYMVMEY---------MEHDLKWLMESMKQPFSTSEVK 120
+H ++V + + Y+ +EY +E D+ M +P + +
Sbjct: 57 NKMLNHENVVKFYGHRREGNIQ-YLFLEYCSGGELFDRIEPDI-----GMPEP----DAQ 106
Query: 121 CLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSR--QYGSPLKPYTSLV 178
QL+ GV YLH + HRD+K NLLL+ + LKI DFG++ +Y + + +
Sbjct: 107 RFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC 166
Query: 179 VTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPT 238
TL Y APELL + ++ VD+WS G ++ +LA
Sbjct: 167 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA------------------------- 201
Query: 239 ETIWPGLSELPGAKANFAKQPYNLLRKR----FPAASFTGSPVLSESGFDLLNRLLTYDP 294
ELP + + + Q Y+ +++ P +P+ LL+++L +P
Sbjct: 202 -------GELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA------LLHKILVENP 248
Query: 295 EKRITVDDALNHYWFHEVPLPKS 317
RIT+ D W+++ PL K
Sbjct: 249 SARITIPDIKKDRWYNK-PLKKG 270
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 143/323 (44%), Gaps = 71/323 (21%)
Query: 10 VFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINI 69
V +++ + + EG YG V A ++ + E VA+K V M R DC P + +EI I
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK--RAVDC-----PENIKKEICI 57
Query: 70 LLSFDHPSIVNVKEVVMDDHDSVYMVMEY---------MEHDLKWLMESMKQPFSTSEVK 120
+H ++V + + Y+ +EY +E D+ M +P + +
Sbjct: 58 NKMLNHENVVKFYGHRREGNIQ-YLFLEYCSGGELFDRIEPDI-----GMPEP----DAQ 107
Query: 121 CLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSR--QYGSPLKPYTSLV 178
QL+ GV YLH + HRD+K NLLL+ + LKI DFG++ +Y + + +
Sbjct: 108 RFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC 167
Query: 179 VTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPT 238
TL Y APELL + ++ VD+WS G ++ +LA
Sbjct: 168 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA------------------------- 202
Query: 239 ETIWPGLSELPGAKANFAKQPYNLLRKR----FPAASFTGSPVLSESGFDLLNRLLTYDP 294
ELP + + + Q Y+ +++ P +P+ LL+++L +P
Sbjct: 203 -------GELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA------LLHKILVENP 249
Query: 295 EKRITVDDALNHYWFHEVPLPKS 317
RIT+ D W+++ PL K
Sbjct: 250 SARITIPDIKKDRWYNK-PLKKG 271
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 105/202 (51%), Gaps = 16/202 (7%)
Query: 19 ISEGTYGIVYRARDK---KSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDH 75
+ G +G V R K K VA+K +K+ K+ F L E +I+ FDH
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ---RRDF----LGEASIMGQFDH 105
Query: 76 PSIVNVKEVVMDDHDSVYMVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLH 134
P+I+ ++ VV V +V EYME+ L + F+ ++ ++ + G+KYL
Sbjct: 106 PNIIRLEGVVTKSK-PVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS 164
Query: 135 DNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQY-GSPLKPYTSL--VVTLWYRAPELLLG 191
D +HRDL N+L+N+ V K+ DFG+SR P YT+ + + + +PE +
Sbjct: 165 DMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE-AIA 223
Query: 192 AKKYSTAVDMWSVGCIMAELLA 213
+K+++A D+WS G ++ E+++
Sbjct: 224 YRKFTSASDVWSYGIVLWEVMS 245
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 143/323 (44%), Gaps = 71/323 (21%)
Query: 10 VFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINI 69
V +++ + + EG YG V A ++ + E VA+K V M R DC P + +EI I
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK--RAVDC-----PENIKKEICI 57
Query: 70 LLSFDHPSIVNVKEVVMDDHDSVYMVMEY---------MEHDLKWLMESMKQPFSTSEVK 120
+H ++V + + Y+ +EY +E D+ M +P + +
Sbjct: 58 NKMLNHENVVKFYGHRREGNIQ-YLFLEYCSGGELFDRIEPDI-----GMPEP----DAQ 107
Query: 121 CLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSR--QYGSPLKPYTSLV 178
QL+ GV YLH + HRD+K NLLL+ + LKI DFG++ +Y + + +
Sbjct: 108 RFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC 167
Query: 179 VTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPT 238
TL Y APELL + ++ VD+WS G ++ +LA
Sbjct: 168 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA------------------------- 202
Query: 239 ETIWPGLSELPGAKANFAKQPYNLLRKR----FPAASFTGSPVLSESGFDLLNRLLTYDP 294
ELP + + + Q Y+ +++ P +P+ LL+++L +P
Sbjct: 203 -------GELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA------LLHKILVENP 249
Query: 295 EKRITVDDALNHYWFHEVPLPKS 317
RIT+ D W+++ PL K
Sbjct: 250 SARITIPDIKKDRWYNK-PLKKG 271
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 143/323 (44%), Gaps = 71/323 (21%)
Query: 10 VFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINI 69
V +++ + + EG YG V A ++ + E VA+K V M R DC P + +EI I
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK--RAVDC-----PENIKKEICI 57
Query: 70 LLSFDHPSIVNVKEVVMDDHDSVYMVMEY---------MEHDLKWLMESMKQPFSTSEVK 120
+H ++V + + Y+ +EY +E D+ M +P + +
Sbjct: 58 NKMLNHENVVKFYGHRREGNIQ-YLFLEYCSGGELFDRIEPDI-----GMPEP----DAQ 107
Query: 121 CLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSR--QYGSPLKPYTSLV 178
QL+ GV YLH + HRD+K NLLL+ + LKI DFG++ +Y + + +
Sbjct: 108 RFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC 167
Query: 179 VTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPT 238
TL Y APELL + ++ VD+WS G ++ +LA
Sbjct: 168 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA------------------------- 202
Query: 239 ETIWPGLSELPGAKANFAKQPYNLLRKR----FPAASFTGSPVLSESGFDLLNRLLTYDP 294
ELP + + + Q Y+ +++ P +P+ LL+++L +P
Sbjct: 203 -------GELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA------LLHKILVENP 249
Query: 295 EKRITVDDALNHYWFHEVPLPKS 317
RIT+ D W+++ PL K
Sbjct: 250 SARITIPDIKKDRWYNK-PLKKG 271
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 133/309 (43%), Gaps = 48/309 (15%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYG-FPISSLREINILL 71
+E + G +V R K + + A+K + + G E ++L+E++IL
Sbjct: 6 YEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILR 65
Query: 72 SFD-HPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGV 130
HP+I+ +K+ + + ++V + M+ + + K S E + +M LLE +
Sbjct: 66 KVSGHPNIIQLKDT-YETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVI 124
Query: 131 KYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLL 190
LH ++HRDLK N+LL++ +K+ DFG S Q P + + T Y APE++
Sbjct: 125 CALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQL-DPGEKLREVCGTPSYLAPEIIE 183
Query: 191 GAKK-----YSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGL 245
+ Y VDMWS G IM LLA P F
Sbjct: 184 CSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF--------------------------- 216
Query: 246 SELPGAKANFAKQPYNLLRKRFPAASFTGSPV---LSESGFDLLNRLLTYDPEKRITVDD 302
+ ++ +LR GSP S++ DL++R L P+KR T ++
Sbjct: 217 ---------WHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEE 267
Query: 303 ALNHYWFHE 311
AL H +F +
Sbjct: 268 ALAHPFFQQ 276
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 143/323 (44%), Gaps = 71/323 (21%)
Query: 10 VFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINI 69
V +++ + + EG YG V A ++ + E VA+K V M R DC P + +EI I
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK--RAVDC-----PENIKKEICI 58
Query: 70 LLSFDHPSIVNVKEVVMDDHDSVYMVMEY---------MEHDLKWLMESMKQPFSTSEVK 120
+H ++V + + Y+ +EY +E D+ M +P + +
Sbjct: 59 NKMLNHENVVKFYGHRREGNIQ-YLFLEYCSGGELFDRIEPDI-----GMPEP----DAQ 108
Query: 121 CLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSR--QYGSPLKPYTSLV 178
QL+ GV YLH + HRD+K NLLL+ + LKI DFG++ +Y + + +
Sbjct: 109 RFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC 168
Query: 179 VTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPT 238
TL Y APELL + ++ VD+WS G ++ +LA
Sbjct: 169 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA------------------------- 203
Query: 239 ETIWPGLSELPGAKANFAKQPYNLLRKR----FPAASFTGSPVLSESGFDLLNRLLTYDP 294
ELP + + + Q Y+ +++ P +P+ LL+++L +P
Sbjct: 204 -------GELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA------LLHKILVENP 250
Query: 295 EKRITVDDALNHYWFHEVPLPKS 317
RIT+ D W+++ PL K
Sbjct: 251 SARITIPDIKKDRWYNK-PLKKG 272
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 143/323 (44%), Gaps = 71/323 (21%)
Query: 10 VFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINI 69
V +++ + + EG YG V A ++ + E VA+K V M R DC P + +EI I
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK--RAVDC-----PENIKKEICI 57
Query: 70 LLSFDHPSIVNVKEVVMDDHDSVYMVMEY---------MEHDLKWLMESMKQPFSTSEVK 120
+H ++V + + Y+ +EY +E D+ M +P + +
Sbjct: 58 NKMLNHENVVKFYGHRREGNIQ-YLFLEYCSGGELFDRIEPDI-----GMPEP----DAQ 107
Query: 121 CLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSR--QYGSPLKPYTSLV 178
QL+ GV YLH + HRD+K NLLL+ + LKI DFG++ +Y + + +
Sbjct: 108 RFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMX 167
Query: 179 VTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPT 238
TL Y APELL + ++ VD+WS G ++ +LA
Sbjct: 168 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA------------------------- 202
Query: 239 ETIWPGLSELPGAKANFAKQPYNLLRKR----FPAASFTGSPVLSESGFDLLNRLLTYDP 294
ELP + + + Q Y+ +++ P +P+ LL+++L +P
Sbjct: 203 -------GELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA------LLHKILVENP 249
Query: 295 EKRITVDDALNHYWFHEVPLPKS 317
RIT+ D W+++ PL K
Sbjct: 250 SARITIPDIKKDRWYNK-PLKKG 271
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 105/202 (51%), Gaps = 16/202 (7%)
Query: 19 ISEGTYGIVYRARDK---KSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDH 75
+ G +G V R K K VA+K +K+ K+ F L E +I+ FDH
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ---RRDF----LGEASIMGQFDH 105
Query: 76 PSIVNVKEVVMDDHDSVYMVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLH 134
P+I+ ++ VV V +V EYME+ L + F+ ++ ++ + G+KYL
Sbjct: 106 PNIIRLEGVVTKSK-PVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS 164
Query: 135 DNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQY-GSPLKPYTSL--VVTLWYRAPELLLG 191
D +HRDL N+L+N+ V K+ DFG+SR P YT+ + + + +PE +
Sbjct: 165 DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE-AIA 223
Query: 192 AKKYSTAVDMWSVGCIMAELLA 213
+K+++A D+WS G ++ E+++
Sbjct: 224 YRKFTSASDVWSYGIVLWEVMS 245
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 105/216 (48%), Gaps = 30/216 (13%)
Query: 12 EFEKLNKISEGTYGIVYRA----RDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREI 67
E + +I G +G+V+ +DK VA+K ++ +ED +E E
Sbjct: 8 ELTFVQEIGSGQFGLVHLGYWLNKDK-----VAIKTIREGAMSEEDFIE---------EA 53
Query: 68 NILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHD-LKWLMESMKQPFSTSEVKCLMLQL 126
+++ HP +V + V ++ + +V E+MEH L + + + F+ + + L +
Sbjct: 54 EVMMKLSHPKLVQLYGVCLE-QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDV 112
Query: 127 LEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSR-----QYGSPLKPYTSLVVTL 181
EG+ YL + V+HRDL N L+ V+K+ DFGM+R QY S T +
Sbjct: 113 CEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSS----TGTKFPV 168
Query: 182 WYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPL 217
+ +PE + +YS+ D+WS G +M E+ ++ +
Sbjct: 169 KWASPE-VFSFSRYSSKSDVWSFGVLMWEVFSEGKI 203
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 103/204 (50%), Gaps = 12/204 (5%)
Query: 27 VYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVM 86
V+ ARD + VA+K ++ ++ R + F + RE + +HP+IV V +
Sbjct: 28 VHLARDLRDHRDVAVKVLRADLAR-----DPSFYLRFRREAQNAAALNHPAIVAVYDTGE 82
Query: 87 DDHDS---VYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDL 143
+ + Y+VMEY++ + + P + ++ + + + H N ++HRD+
Sbjct: 83 AETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDV 142
Query: 144 KTSNLLLNNQGVLKICDFGMSRQY---GSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVD 200
K +N++++ +K+ DFG++R G+ + +++ T Y +PE G D
Sbjct: 143 KPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARG-DSVDARSD 201
Query: 201 MWSVGCIMAELLAKKPLFSGTTEV 224
++S+GC++ E+L +P F+G + V
Sbjct: 202 VYSLGCVLYEVLTGEPPFTGDSPV 225
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 104/213 (48%), Gaps = 30/213 (14%)
Query: 12 EFEKLNKISEGTYGIVYRA----RDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREI 67
E + +I G +G+V+ +DK VA+K ++ +ED +E E
Sbjct: 6 ELTFVQEIGSGQFGLVHLGYWLNKDK-----VAIKTIREGAMSEEDFIE---------EA 51
Query: 68 NILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHD-LKWLMESMKQPFSTSEVKCLMLQL 126
+++ HP +V + V ++ + +V E+MEH L + + + F+ + + L +
Sbjct: 52 EVMMKLSHPKLVQLYGVCLE-QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDV 110
Query: 127 LEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSR-----QYGSPLKPYTSLVVTL 181
EG+ YL + V+HRDL N L+ V+K+ DFGM+R QY S T +
Sbjct: 111 CEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSS----TGTKFPV 166
Query: 182 WYRAPELLLGAKKYSTAVDMWSVGCIMAELLAK 214
+ +PE + +YS+ D+WS G +M E+ ++
Sbjct: 167 KWASPE-VFSFSRYSSKSDVWSFGVLMWEVFSE 198
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 105/202 (51%), Gaps = 16/202 (7%)
Query: 19 ISEGTYGIVYRARDK---KSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDH 75
+ G +G V R K K VA+K +K+ K+ F L E +I+ FDH
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ---RRDF----LGEASIMGQFDH 105
Query: 76 PSIVNVKEVVMDDHDSVYMVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLH 134
P+I+ ++ VV V +V EYME+ L + F+ ++ ++ + G+KYL
Sbjct: 106 PNIIRLEGVVTKSK-PVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS 164
Query: 135 DNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQY-GSPLKPYTSL--VVTLWYRAPELLLG 191
D +HRDL N+L+N+ V K+ DFG+SR P YT+ + + + +PE +
Sbjct: 165 DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE-AIA 223
Query: 192 AKKYSTAVDMWSVGCIMAELLA 213
+K+++A D+WS G ++ E+++
Sbjct: 224 YRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 105/202 (51%), Gaps = 16/202 (7%)
Query: 19 ISEGTYGIVYRARDK---KSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDH 75
+ G +G V R K K VA+K +K+ K+ F L E +I+ FDH
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ---RRDF----LGEASIMGQFDH 105
Query: 76 PSIVNVKEVVMDDHDSVYMVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLH 134
P+I+ ++ VV V +V EYME+ L + F+ ++ ++ + G+KYL
Sbjct: 106 PNIIRLEGVVTKSK-PVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS 164
Query: 135 DNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQY-GSPLKPYTSL--VVTLWYRAPELLLG 191
D +HRDL N+L+N+ V K+ DFG+SR P YT+ + + + +PE +
Sbjct: 165 DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE-AIA 223
Query: 192 AKKYSTAVDMWSVGCIMAELLA 213
+K+++A D+WS G ++ E+++
Sbjct: 224 YRKFTSASDVWSYGIVLWEVMS 245
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 105/216 (48%), Gaps = 30/216 (13%)
Query: 12 EFEKLNKISEGTYGIVYRA----RDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREI 67
E + +I G +G+V+ +DK VA+K ++ +ED +E E
Sbjct: 11 ELTFVQEIGSGQFGLVHLGYWLNKDK-----VAIKTIREGAMSEEDFIE---------EA 56
Query: 68 NILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHD-LKWLMESMKQPFSTSEVKCLMLQL 126
+++ HP +V + V ++ + +V E+MEH L + + + F+ + + L +
Sbjct: 57 EVMMKLSHPKLVQLYGVCLE-QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDV 115
Query: 127 LEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSR-----QYGSPLKPYTSLVVTL 181
EG+ YL + V+HRDL N L+ V+K+ DFGM+R QY S T +
Sbjct: 116 CEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSS----TGTKFPV 171
Query: 182 WYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPL 217
+ +PE + +YS+ D+WS G +M E+ ++ +
Sbjct: 172 KWASPE-VFSFSRYSSKSDVWSFGVLMWEVFSEGKI 206
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 105/202 (51%), Gaps = 16/202 (7%)
Query: 19 ISEGTYGIVYRARDK---KSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDH 75
+ G +G V R K K VA+K +K+ K+ F L E +I+ FDH
Sbjct: 51 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ---RRDF----LGEASIMGQFDH 103
Query: 76 PSIVNVKEVVMDDHDSVYMVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLH 134
P+I+ ++ VV V +V EYME+ L + F+ ++ ++ + G+KYL
Sbjct: 104 PNIIRLEGVVTKSK-PVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS 162
Query: 135 DNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQY-GSPLKPYTSL--VVTLWYRAPELLLG 191
D +HRDL N+L+N+ V K+ DFG+SR P YT+ + + + +PE +
Sbjct: 163 DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE-AIA 221
Query: 192 AKKYSTAVDMWSVGCIMAELLA 213
+K+++A D+WS G ++ E+++
Sbjct: 222 YRKFTSASDVWSYGIVLWEVMS 243
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 105/216 (48%), Gaps = 30/216 (13%)
Query: 12 EFEKLNKISEGTYGIVYRA----RDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREI 67
E + +I G +G+V+ +DK VA+K ++ +ED +E E
Sbjct: 8 ELTFVQEIGSGQFGLVHLGYWLNKDK-----VAIKTIREGAMSEEDFIE---------EA 53
Query: 68 NILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHD-LKWLMESMKQPFSTSEVKCLMLQL 126
+++ HP +V + V ++ + +V E+MEH L + + + F+ + + L +
Sbjct: 54 EVMMKLSHPKLVQLYGVCLE-QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDV 112
Query: 127 LEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSR-----QYGSPLKPYTSLVVTL 181
EG+ YL + V+HRDL N L+ V+K+ DFGM+R QY S T +
Sbjct: 113 CEGMAYLEEASVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSS----TGTKFPV 168
Query: 182 WYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPL 217
+ +PE + +YS+ D+WS G +M E+ ++ +
Sbjct: 169 KWASPE-VFSFSRYSSKSDVWSFGVLMWEVFSEGKI 203
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 105/202 (51%), Gaps = 16/202 (7%)
Query: 19 ISEGTYGIVYRARDK---KSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDH 75
+ G +G V R K K VA+K +K+ K+ F L E +I+ FDH
Sbjct: 41 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ---RRDF----LGEASIMGQFDH 93
Query: 76 PSIVNVKEVVMDDHDSVYMVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLH 134
P+I+ ++ VV V +V EYME+ L + F+ ++ ++ + G+KYL
Sbjct: 94 PNIIRLEGVVTKSK-PVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS 152
Query: 135 DNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQY-GSPLKPYTSL--VVTLWYRAPELLLG 191
D +HRDL N+L+N+ V K+ DFG+SR P YT+ + + + +PE +
Sbjct: 153 DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE-AIA 211
Query: 192 AKKYSTAVDMWSVGCIMAELLA 213
+K+++A D+WS G ++ E+++
Sbjct: 212 YRKFTSASDVWSYGIVLWEVMS 233
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 105/202 (51%), Gaps = 16/202 (7%)
Query: 19 ISEGTYGIVYRARDK---KSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDH 75
+ G +G V R K K VA+K +K+ K+ F L E +I+ FDH
Sbjct: 24 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ---RRDF----LGEASIMGQFDH 76
Query: 76 PSIVNVKEVVMDDHDSVYMVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLH 134
P+I+ ++ VV V +V EYME+ L + F+ ++ ++ + G+KYL
Sbjct: 77 PNIIRLEGVVTKSK-PVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS 135
Query: 135 DNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQY-GSPLKPYTSL--VVTLWYRAPELLLG 191
D +HRDL N+L+N+ V K+ DFG+SR P YT+ + + + +PE +
Sbjct: 136 DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE-AIA 194
Query: 192 AKKYSTAVDMWSVGCIMAELLA 213
+K+++A D+WS G ++ E+++
Sbjct: 195 YRKFTSASDVWSYGIVLWEVMS 216
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 105/202 (51%), Gaps = 16/202 (7%)
Query: 19 ISEGTYGIVYRARDK---KSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDH 75
+ G +G V R K K VA+K +K+ K+ F L E +I+ FDH
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ---RRDF----LGEASIMGQFDH 105
Query: 76 PSIVNVKEVVMDDHDSVYMVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLH 134
P+I+ ++ VV V +V EYME+ L + F+ ++ ++ + G+KYL
Sbjct: 106 PNIIRLEGVVTKSK-PVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS 164
Query: 135 DNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQY-GSPLKPYTSL--VVTLWYRAPELLLG 191
D +HRDL N+L+N+ V K+ DFG+SR P YT+ + + + +PE +
Sbjct: 165 DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE-AIA 223
Query: 192 AKKYSTAVDMWSVGCIMAELLA 213
+K+++A D+WS G ++ E+++
Sbjct: 224 YRKFTSASDVWSYGIVLWEVMS 245
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 105/216 (48%), Gaps = 30/216 (13%)
Query: 12 EFEKLNKISEGTYGIVYRA----RDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREI 67
E + +I G +G+V+ +DK VA+K ++ +ED +E E
Sbjct: 9 ELTFVQEIGSGQFGLVHLGYWLNKDK-----VAIKTIREGAMSEEDFIE---------EA 54
Query: 68 NILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHD-LKWLMESMKQPFSTSEVKCLMLQL 126
+++ HP +V + V ++ + +V E+MEH L + + + F+ + + L +
Sbjct: 55 EVMMKLSHPKLVQLYGVCLE-QAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDV 113
Query: 127 LEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSR-----QYGSPLKPYTSLVVTL 181
EG+ YL + V+HRDL N L+ V+K+ DFGM+R QY S T +
Sbjct: 114 CEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSS----TGTKFPV 169
Query: 182 WYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPL 217
+ +PE + +YS+ D+WS G +M E+ ++ +
Sbjct: 170 KWASPE-VFSFSRYSSKSDVWSFGVLMWEVFSEGKI 204
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 140/317 (44%), Gaps = 70/317 (22%)
Query: 10 VFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINI 69
V +++ + + EG YG V A ++ + E VA+K V M R DC P + +EI I
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK--RAVDC-----PENIKKEICI 58
Query: 70 LLSFDHPSIVNVKEVVMDDHDSVYMVMEY---------MEHDLKWLMESMKQPFSTSEVK 120
+H ++V + + Y+ +EY +E D+ M +P + +
Sbjct: 59 NKMLNHENVVKFYGHRREGNIQ-YLFLEYCSGGELFDRIEPDI-----GMPEP----DAQ 108
Query: 121 CLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSR--QYGSPLKPYTSLV 178
QL+ GV YLH + HRD+K NLLL+ + LKI DFG++ +Y + + +
Sbjct: 109 RFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC 168
Query: 179 VTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPT 238
TL Y APELL + ++ VD+WS G ++ +LA
Sbjct: 169 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA------------------------- 203
Query: 239 ETIWPGLSELPGAKANFAKQPYNLLRKR----FPAASFTGSPVLSESGFDLLNRLLTYDP 294
ELP + + + Q Y+ +++ P +P+ LL+++L +P
Sbjct: 204 -------GELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA------LLHKILVENP 250
Query: 295 EKRITVDDALNHYWFHE 311
RIT+ D W+++
Sbjct: 251 SARITIPDIKKDRWYNK 267
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 140/317 (44%), Gaps = 70/317 (22%)
Query: 10 VFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINI 69
V +++ + + EG YG V A ++ + E VA+K V M R DC P + +EI I
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK--RAVDC-----PENIKKEICI 57
Query: 70 LLSFDHPSIVNVKEVVMDDHDSVYMVMEY---------MEHDLKWLMESMKQPFSTSEVK 120
+H ++V + + Y+ +EY +E D+ M +P + +
Sbjct: 58 NKMLNHENVVKFYGHRREGNIQ-YLFLEYCSGGELFDRIEPDI-----GMPEP----DAQ 107
Query: 121 CLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSR--QYGSPLKPYTSLV 178
QL+ GV YLH + HRD+K NLLL+ + LKI DFG++ +Y + + +
Sbjct: 108 RFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC 167
Query: 179 VTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPT 238
TL Y APELL + ++ VD+WS G ++ +LA
Sbjct: 168 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA------------------------- 202
Query: 239 ETIWPGLSELPGAKANFAKQPYNLLRKR----FPAASFTGSPVLSESGFDLLNRLLTYDP 294
ELP + + + Q Y+ +++ P +P+ LL+++L +P
Sbjct: 203 -------GELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA------LLHKILVENP 249
Query: 295 EKRITVDDALNHYWFHE 311
RIT+ D W+++
Sbjct: 250 SARITIPDIKKDRWYNK 266
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 140/317 (44%), Gaps = 70/317 (22%)
Query: 10 VFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINI 69
V +++ + + EG YG V A ++ + E VA+K V M R DC P + +EI I
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK--RAVDC-----PENIKKEICI 57
Query: 70 LLSFDHPSIVNVKEVVMDDHDSVYMVMEY---------MEHDLKWLMESMKQPFSTSEVK 120
+H ++V + + Y+ +EY +E D+ M +P + +
Sbjct: 58 NKMLNHENVVKFYGHRREGNIQ-YLFLEYCSGGELFDRIEPDI-----GMPEP----DAQ 107
Query: 121 CLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSR--QYGSPLKPYTSLV 178
QL+ GV YLH + HRD+K NLLL+ + LKI DFG++ +Y + + +
Sbjct: 108 RFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC 167
Query: 179 VTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPT 238
TL Y APELL + ++ VD+WS G ++ +LA
Sbjct: 168 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA------------------------- 202
Query: 239 ETIWPGLSELPGAKANFAKQPYNLLRKR----FPAASFTGSPVLSESGFDLLNRLLTYDP 294
ELP + + + Q Y+ +++ P +P+ LL+++L +P
Sbjct: 203 -------GELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA------LLHKILVENP 249
Query: 295 EKRITVDDALNHYWFHE 311
RIT+ D W+++
Sbjct: 250 SARITIPDIKKDRWYNK 266
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 109/204 (53%), Gaps = 18/204 (8%)
Query: 19 ISEGTYGIVYRARDKKSGE---IVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDH 75
I G +G V R R K G+ VA+K +K ++ E+ L E +I+ F+H
Sbjct: 22 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQR-REF------LSEASIMGQFEH 74
Query: 76 PSIVNVKEVVMDDHDSVYMVMEYMEHD-LKWLMESMKQPFSTSEVKCLMLQLLEGVKYLH 134
P+I+ ++ VV + V ++ E+ME+ L + F+ ++ ++ + G++YL
Sbjct: 75 PNIIRLEGVVTNSM-PVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLA 133
Query: 135 DNWVLHRDLKTSNLLLNNQGVLKICDFGMSR--QYGSPLKPYTSLV---VTLWYRAPELL 189
+ +HRDL N+L+N+ V K+ DFG+SR + S YTS + + + + APE
Sbjct: 134 EMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPE-A 192
Query: 190 LGAKKYSTAVDMWSVGCIMAELLA 213
+ +K+++A D WS G +M E+++
Sbjct: 193 IAFRKFTSASDAWSYGIVMWEVMS 216
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 140/317 (44%), Gaps = 70/317 (22%)
Query: 10 VFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINI 69
V +++ + + EG YG V A ++ + E VA+K V M R DC P + +EI I
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK--RAVDC-----PENIKKEICI 57
Query: 70 LLSFDHPSIVNVKEVVMDDHDSVYMVMEY---------MEHDLKWLMESMKQPFSTSEVK 120
+H ++V + + Y+ +EY +E D+ M +P + +
Sbjct: 58 NKMLNHENVVKFYGHRREGNIQ-YLFLEYCSGGELFDRIEPDI-----GMPEP----DAQ 107
Query: 121 CLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSR--QYGSPLKPYTSLV 178
QL+ GV YLH + HRD+K NLLL+ + LKI DFG++ +Y + + +
Sbjct: 108 RFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMX 167
Query: 179 VTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPT 238
TL Y APELL + ++ VD+WS G ++ +LA
Sbjct: 168 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA------------------------- 202
Query: 239 ETIWPGLSELPGAKANFAKQPYNLLRKR----FPAASFTGSPVLSESGFDLLNRLLTYDP 294
ELP + + + Q Y+ +++ P +P+ LL+++L +P
Sbjct: 203 -------GELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA------LLHKILVENP 249
Query: 295 EKRITVDDALNHYWFHE 311
RIT+ D W+++
Sbjct: 250 SARITIPDIKKDRWYNK 266
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 103/207 (49%), Gaps = 12/207 (5%)
Query: 22 GTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNV 81
G V+ ARD + VA+K ++ ++ R + F + RE + +HP+IV V
Sbjct: 23 GGMSEVHLARDLRDHRDVAVKVLRADLAR-----DPSFYLRFRREAQNAAALNHPAIVAV 77
Query: 82 KEVVMDDHDS---VYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWV 138
+ + + Y+VMEY++ + + P + ++ + + + H N +
Sbjct: 78 YDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGI 137
Query: 139 LHRDLKTSNLLLNNQGVLKICDFGMSR---QYGSPLKPYTSLVVTLWYRAPELLLGAKKY 195
+HRD+K +N++++ +K+ DFG++R G+ + +++ T Y +PE G
Sbjct: 138 IHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARG-DSV 196
Query: 196 STAVDMWSVGCIMAELLAKKPLFSGTT 222
D++S+GC++ E+L +P F+G +
Sbjct: 197 DARSDVYSLGCVLYEVLTGEPPFTGDS 223
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 105/202 (51%), Gaps = 16/202 (7%)
Query: 19 ISEGTYGIVYRARDK---KSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDH 75
+ G +G V R K K VA+K +K+ K+ F L E +I+ FDH
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ---RRDF----LGEASIMGQFDH 105
Query: 76 PSIVNVKEVVMDDHDSVYMVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLH 134
P+I+ ++ VV V +V EYME+ L + F+ ++ ++ + G+KYL
Sbjct: 106 PNIIRLEGVVTKSK-PVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS 164
Query: 135 DNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQY-GSPLKPYTSL--VVTLWYRAPELLLG 191
D +HRDL N+L+N+ V K+ DFG++R P YT+ + + + +PE +
Sbjct: 165 DMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPE-AIA 223
Query: 192 AKKYSTAVDMWSVGCIMAELLA 213
+K+++A D+WS G ++ E+++
Sbjct: 224 YRKFTSASDVWSYGIVLWEVMS 245
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 104/213 (48%), Gaps = 30/213 (14%)
Query: 12 EFEKLNKISEGTYGIVYRA----RDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREI 67
E + +I G +G+V+ +DK VA+K +K ++D +E E
Sbjct: 28 ELTFVQEIGSGQFGLVHLGYWLNKDK-----VAIKTIKEGSMSEDDFIE---------EA 73
Query: 68 NILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHD-LKWLMESMKQPFSTSEVKCLMLQL 126
+++ HP +V + V ++ + +V E+MEH L + + + F+ + + L +
Sbjct: 74 EVMMKLSHPKLVQLYGVCLE-QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDV 132
Query: 127 LEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSR-----QYGSPLKPYTSLVVTL 181
EG+ YL + V+HRDL N L+ V+K+ DFGM+R QY S T +
Sbjct: 133 CEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSS----TGTKFPV 188
Query: 182 WYRAPELLLGAKKYSTAVDMWSVGCIMAELLAK 214
+ +PE + +YS+ D+WS G +M E+ ++
Sbjct: 189 KWASPE-VFSFSRYSSKSDVWSFGVLMWEVFSE 220
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 103/204 (50%), Gaps = 12/204 (5%)
Query: 27 VYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVM 86
V+ ARD + VA+K ++ ++ R + F + RE + +HP+IV V +
Sbjct: 28 VHLARDLRLHRDVAVKVLRADLAR-----DPSFYLRFRREAQNAAALNHPAIVAVYDTGE 82
Query: 87 DDHDS---VYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDL 143
+ + Y+VMEY++ + + P + ++ + + + H N ++HRD+
Sbjct: 83 AETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDV 142
Query: 144 KTSNLLLNNQGVLKICDFGMSRQY---GSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVD 200
K +N++++ +K+ DFG++R G+ + +++ T Y +PE G D
Sbjct: 143 KPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARG-DSVDARSD 201
Query: 201 MWSVGCIMAELLAKKPLFSGTTEV 224
++S+GC++ E+L +P F+G + V
Sbjct: 202 VYSLGCVLYEVLTGEPPFTGDSPV 225
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 112/225 (49%), Gaps = 29/225 (12%)
Query: 6 GCRSVFEFEK-----LNKISEGTYGIVYRAR----DKKSGEIVALKKVKMNVGRKEDCLE 56
G R +FE+ L ++ +G +G V R +GE+VA+KK++ + E
Sbjct: 1 GSRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE 60
Query: 57 YGFPISSLREINILLSFDHPSIVNVKEVVMD-DHDSVYMVMEYMEH-DLKWLMESMKQPF 114
REI IL S H +IV K V ++ ++MEY+ + L+ ++ K+
Sbjct: 61 --------REIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI 112
Query: 115 STSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMS------RQYG 168
++ Q+ +G++YL +HR+L T N+L+ N+ +KI DFG++ ++Y
Sbjct: 113 DHIKLLQYTSQICKGMEYLGTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYY 172
Query: 169 SPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA 213
+P S + WY APE L + K+S A D+WS G ++ EL
Sbjct: 173 KVKEPGESPI--FWY-APESLTES-KFSVASDVWSFGVVLYELFT 213
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 121/231 (52%), Gaps = 18/231 (7%)
Query: 10 VFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINI 69
+ + E L ++ GT G V++ R +K+G ++A+K+++ + ++E+ L ++++
Sbjct: 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEEN-------KRILMDLDV 76
Query: 70 LL-SFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLE 128
+L S D P IV + + D V++ ME M + L + M+ P + + + +++
Sbjct: 77 VLKSHDCPYIVQCFGTFITNTD-VFIAMELMGTCAEKLKKRMQGPIPERILGKMTVAIVK 135
Query: 129 GVKYLHD-NWVLHRDLKTSNLLLNNQGVLKICDFGMS-RQYGSPLKPYTSLVVTLWYRAP 186
+ YL + + V+HRD+K SN+LL+ +G +K+CDFG+S R K ++ Y AP
Sbjct: 136 ALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSAGCAA--YMAP 193
Query: 187 ELL----LGAKKYSTAVDMWSVGCIMAELLAKK-PLFSGTTEVDQIDKIFK 232
E + Y D+WS+G + EL + P + T+ + + K+ +
Sbjct: 194 ERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQ 244
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 88/154 (57%), Gaps = 6/154 (3%)
Query: 64 LREINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEH-DLKWLMESMKQPFSTSEVKCL 122
L E +I+ FDHP+I+ ++ VV ++ +V EYME+ L + + F+ ++ +
Sbjct: 98 LSEASIMGQFDHPNIIRLEGVVTRGRLAM-IVTEYMENGSLDTFLRTHDGQFTIMQLVGM 156
Query: 123 MLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQY-GSPLKPYTSL--VV 179
+ + G++YL D +HRDL N+L+++ V K+ DFG+SR P YT+ +
Sbjct: 157 LRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKI 216
Query: 180 TLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA 213
+ + APE + + +S+A D+WS G +M E+LA
Sbjct: 217 PIRWTAPE-AIAFRTFSSASDVWSFGVVMWEVLA 249
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 104/202 (51%), Gaps = 16/202 (7%)
Query: 19 ISEGTYGIVYRARDK---KSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDH 75
+ G +G V R K K VA+K +K+ K+ F L E +I+ FDH
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ---RRDF----LGEASIMGQFDH 105
Query: 76 PSIVNVKEVVMDDHDSVYMVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLH 134
P+I+ ++ VV V +V EYME+ L + F+ ++ ++ + G+KYL
Sbjct: 106 PNIIRLEGVVTKSK-PVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS 164
Query: 135 DNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQY-GSPLKPYTSL--VVTLWYRAPELLLG 191
D +HRDL N+L+N+ V K+ DFG+ R P YT+ + + + +PE +
Sbjct: 165 DMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPE-AIA 223
Query: 192 AKKYSTAVDMWSVGCIMAELLA 213
+K+++A D+WS G ++ E+++
Sbjct: 224 YRKFTSASDVWSYGIVLWEVMS 245
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 105/218 (48%), Gaps = 25/218 (11%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
FE + + GTYG VY+ R K+G++ A+K + + +E+ + EIN+L
Sbjct: 26 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQ---------EINMLKK 76
Query: 73 FDH--------PSIVNVKEVVMDDHDSVYMVMEYM-EHDLKWLMESMKQPFSTSE-VKCL 122
+ H + + MDD +++VME+ + L+++ K E + +
Sbjct: 77 YSHHRNIATYYGAFIKKNPPGMDDQ--LWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYI 134
Query: 123 MLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLW 182
++L G+ +LH + V+HRD+K N+LL +K+ DFG+S Q + + + T +
Sbjct: 135 CREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPY 194
Query: 183 YRAPELLLGAKK----YSTAVDMWSVGCIMAELLAKKP 216
+ APE++ + Y D+WS+G E+ P
Sbjct: 195 WMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAP 232
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 101/204 (49%), Gaps = 12/204 (5%)
Query: 27 VYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNV---KE 83
V+ ARD + VA+K ++ ++ R + F + RE + +HP+IV V E
Sbjct: 28 VHLARDLRLHRDVAVKVLRADLAR-----DPSFYLRFRREAQNAAALNHPAIVAVYATGE 82
Query: 84 VVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDL 143
Y+VMEY++ + + P + ++ + + + H N ++HRD+
Sbjct: 83 AETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDV 142
Query: 144 KTSNLLLNNQGVLKICDFGMSRQY---GSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVD 200
K +N++++ +K+ DFG++R G+ + +++ T Y +PE G D
Sbjct: 143 KPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARG-DSVDARSD 201
Query: 201 MWSVGCIMAELLAKKPLFSGTTEV 224
++S+GC++ E+L +P F+G + V
Sbjct: 202 VYSLGCVLYEVLTGEPPFTGDSPV 225
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 117/223 (52%), Gaps = 21/223 (9%)
Query: 19 ISEGTYGIVYRARDKKSGE---IVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDH 75
I G +G V K G+ VA+K +K K+ F L E +I+ FDH
Sbjct: 41 IGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQ---RRDF----LSEASIMGQFDH 93
Query: 76 PSIVNVKEVVMDDHDSVYMVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLH 134
P++++++ VV V ++ E+ME+ L + F+ ++ ++ + G+KYL
Sbjct: 94 PNVIHLEGVVTKS-TPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLA 152
Query: 135 DNWVLHRDLKTSNLLLNNQGVLKICDFGMSR--QYGSPLKPYTSLV---VTLWYRAPELL 189
D +HRDL N+L+N+ V K+ DFG+SR + + YTS + + + + APE
Sbjct: 153 DMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPE-A 211
Query: 190 LGAKKYSTAVDMWSVGCIMAELLA--KKPLFSGTTEVDQIDKI 230
+ +K+++A D+WS G +M E+++ ++P + T + D I+ I
Sbjct: 212 IQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQ-DVINAI 253
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 103/204 (50%), Gaps = 12/204 (5%)
Query: 27 VYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVM 86
V+ ARD + VA+K ++ ++ R + F + RE + +HP+IV V +
Sbjct: 45 VHLARDLRLHRDVAVKVLRADLAR-----DPSFYLRFRREAQNAAALNHPAIVAVYDTGE 99
Query: 87 DDHDSV---YMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDL 143
+ + Y+VMEY++ + + P + ++ + + + H N ++HRD+
Sbjct: 100 AETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDV 159
Query: 144 KTSNLLLNNQGVLKICDFGMSRQY---GSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVD 200
K +N++++ +K+ DFG++R G+ + +++ T Y +PE G D
Sbjct: 160 KPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARG-DSVDARSD 218
Query: 201 MWSVGCIMAELLAKKPLFSGTTEV 224
++S+GC++ E+L +P F+G + V
Sbjct: 219 VYSLGCVLYEVLTGEPPFTGDSPV 242
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 118/226 (52%), Gaps = 19/226 (8%)
Query: 19 ISEGTYGIVYRARDKKSGEIVALK-----KVKMNVGRKEDCLEYGFPISSLREINILLSF 73
I G +G VY R +G++ A+K ++KM G ++ ++++ +
Sbjct: 196 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGET-------LALNERIMLSLVSTG 248
Query: 74 DHPSIVNVKEVVMDDHDSVYMVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEGVKY 132
D P IV + D + +++ M DL + + S FS ++++ +++ G+++
Sbjct: 249 DCPFIVCMS-YAFHTPDKLSFILDLMNGGDLHYHL-SQHGVFSEADMRFYAAEIILGLEH 306
Query: 133 LHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGA 192
+H+ +V++RDLK +N+LL+ G ++I D G++ + S KP+ S V T Y APE+L
Sbjct: 307 MHNRFVVYRDLKPANILLDEHGHVRISDLGLACDF-SKKKPHAS-VGTHGYMAPEVLQKG 364
Query: 193 KKYSTAVDMWSVGCIMAELLAKKPLFSG--TTEVDQIDKIFKTLGT 236
Y ++ D +S+GC++ +LL F T + +ID++ T+
Sbjct: 365 VAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAV 410
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 118/226 (52%), Gaps = 19/226 (8%)
Query: 19 ISEGTYGIVYRARDKKSGEIVALK-----KVKMNVGRKEDCLEYGFPISSLREINILLSF 73
I G +G VY R +G++ A+K ++KM G ++ ++++ +
Sbjct: 197 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGET-------LALNERIMLSLVSTG 249
Query: 74 DHPSIVNVKEVVMDDHDSVYMVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEGVKY 132
D P IV + D + +++ M DL + + S FS ++++ +++ G+++
Sbjct: 250 DCPFIVCMS-YAFHTPDKLSFILDLMNGGDLHYHL-SQHGVFSEADMRFYAAEIILGLEH 307
Query: 133 LHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGA 192
+H+ +V++RDLK +N+LL+ G ++I D G++ + S KP+ S V T Y APE+L
Sbjct: 308 MHNRFVVYRDLKPANILLDEHGHVRISDLGLACDF-SKKKPHAS-VGTHGYMAPEVLQKG 365
Query: 193 KKYSTAVDMWSVGCIMAELLAKKPLFSG--TTEVDQIDKIFKTLGT 236
Y ++ D +S+GC++ +LL F T + +ID++ T+
Sbjct: 366 VAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAV 411
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 104/202 (51%), Gaps = 16/202 (7%)
Query: 19 ISEGTYGIVYRARDK---KSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDH 75
+ G +G V R K K VA+K +K+ K+ F L E +I+ FDH
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ---RRDF----LGEASIMGQFDH 105
Query: 76 PSIVNVKEVVMDDHDSVYMVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLH 134
P+I+ ++ VV V +V E ME+ L + F+ ++ ++ + G+KYL
Sbjct: 106 PNIIRLEGVVTKSK-PVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS 164
Query: 135 DNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQY-GSPLKPYTSL--VVTLWYRAPELLLG 191
D +HRDL N+L+N+ V K+ DFG+SR P YT+ + + + +PE +
Sbjct: 165 DMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE-AIA 223
Query: 192 AKKYSTAVDMWSVGCIMAELLA 213
+K+++A D+WS G ++ E+++
Sbjct: 224 YRKFTSASDVWSYGIVLWEVMS 245
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 118/226 (52%), Gaps = 19/226 (8%)
Query: 19 ISEGTYGIVYRARDKKSGEIVALK-----KVKMNVGRKEDCLEYGFPISSLREINILLSF 73
I G +G VY R +G++ A+K ++KM G ++ ++++ +
Sbjct: 197 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGET-------LALNERIMLSLVSTG 249
Query: 74 DHPSIVNVKEVVMDDHDSVYMVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEGVKY 132
D P IV + D + +++ M DL + + S FS ++++ +++ G+++
Sbjct: 250 DCPFIVCMS-YAFHTPDKLSFILDLMNGGDLHYHL-SQHGVFSEADMRFYAAEIILGLEH 307
Query: 133 LHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGA 192
+H+ +V++RDLK +N+LL+ G ++I D G++ + S KP+ S V T Y APE+L
Sbjct: 308 MHNRFVVYRDLKPANILLDEHGHVRISDLGLACDF-SKKKPHAS-VGTHGYMAPEVLQKG 365
Query: 193 KKYSTAVDMWSVGCIMAELLAKKPLFSG--TTEVDQIDKIFKTLGT 236
Y ++ D +S+GC++ +LL F T + +ID++ T+
Sbjct: 366 VAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAV 411
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 118/226 (52%), Gaps = 19/226 (8%)
Query: 19 ISEGTYGIVYRARDKKSGEIVALK-----KVKMNVGRKEDCLEYGFPISSLREINILLSF 73
I G +G VY R +G++ A+K ++KM G ++ ++++ +
Sbjct: 197 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGET-------LALNERIMLSLVSTG 249
Query: 74 DHPSIVNVKEVVMDDHDSVYMVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEGVKY 132
D P IV + D + +++ M DL + + S FS ++++ +++ G+++
Sbjct: 250 DCPFIVCMS-YAFHTPDKLSFILDLMNGGDLHYHL-SQHGVFSEADMRFYAAEIILGLEH 307
Query: 133 LHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGA 192
+H+ +V++RDLK +N+LL+ G ++I D G++ + S KP+ S V T Y APE+L
Sbjct: 308 MHNRFVVYRDLKPANILLDEHGHVRISDLGLACDF-SKKKPHAS-VGTHGYMAPEVLQKG 365
Query: 193 KKYSTAVDMWSVGCIMAELLAKKPLFSG--TTEVDQIDKIFKTLGT 236
Y ++ D +S+GC++ +LL F T + +ID++ T+
Sbjct: 366 VAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAV 411
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 106/210 (50%), Gaps = 24/210 (11%)
Query: 16 LNKISEGTYGIVYRAR----DKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILL 71
L ++ +G +G V R +GE+VA+KK++ + E REI IL
Sbjct: 15 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE--------REIEILK 66
Query: 72 SFDHPSIVNVKEVVMD-DHDSVYMVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEG 129
S H +IV K V ++ ++MEY+ + L+ ++ K+ ++ Q+ +G
Sbjct: 67 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 126
Query: 130 VKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMS------RQYGSPLKPYTSLVVTLWY 183
++YL +HRDL T N+L+ N+ +KI DFG++ +++ +P S + WY
Sbjct: 127 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPI--FWY 184
Query: 184 RAPELLLGAKKYSTAVDMWSVGCIMAELLA 213
APE L + K+S A D+WS G ++ EL
Sbjct: 185 -APESLTES-KFSVASDVWSFGVVLYELFT 212
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 135/317 (42%), Gaps = 60/317 (18%)
Query: 3 MLQGCRSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKV--KMNVGRKEDCLEYGFP 60
M R +++ ++ +G + +V R K + A K + K R LE
Sbjct: 23 MATCTRFTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLE---- 78
Query: 61 ISSLREINILLSFDHPSIVNVKEVVMDDHDSV------YMVMEYMEHDLKWLMESMKQPF 114
RE I HP+IV + HDS+ Y+V + + + ++ +
Sbjct: 79 ----REARICRLLKHPNIVRL-------HDSISEEGFHYLVFDLVTGGELFEDIVAREYY 127
Query: 115 STSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQ---GVLKICDFGMSRQYGSPL 171
S ++ + Q+LE V ++H + ++HRDLK NLLL ++ +K+ DFG++ +
Sbjct: 128 SEADASHCIHQILESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQ 187
Query: 172 KPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIF 231
+ + T Y +PE+L Y VD+W+ G I+ LL P F + DQ K++
Sbjct: 188 QAWFGFAGTPGYLSPEVLR-KDPYGKPVDIWACGVILYILLVGYPPF---WDEDQ-HKLY 242
Query: 232 KTLGTPTETIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLT 291
+ I G + P + + ++ +L+N++LT
Sbjct: 243 -------QQIKAGAYDFPSPEWD----------------------TVTPEAKNLINQMLT 273
Query: 292 YDPEKRITVDDALNHYW 308
+P KRIT D AL H W
Sbjct: 274 INPAKRITADQALKHPW 290
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 114/252 (45%), Gaps = 38/252 (15%)
Query: 6 GCRSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLR 65
R +FE++ + +G +G V +AR+ A+KK++ E+ L + L
Sbjct: 1 SLRYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIR----HTEEKLS-----TILS 51
Query: 66 EINILLSFDHPSIVNVKEVVMDDHD------------SVYMVMEYMEHDLKW-LMESMKQ 112
E+ +L S +H +V ++ + ++++ MEY E+ + L+ S
Sbjct: 52 EVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENL 111
Query: 113 PFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPL- 171
E L Q+LE + Y+H ++HRDLK N+ ++ +KI DFG+++ L
Sbjct: 112 NQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLD 171
Query: 172 -------------KPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLF 218
TS + T Y A E+L G Y+ +DM+S+G I E++ P
Sbjct: 172 ILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY--PFS 229
Query: 219 SGTTEVDQIDKI 230
+G V+ + K+
Sbjct: 230 TGMERVNILKKL 241
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 113/226 (50%), Gaps = 29/226 (12%)
Query: 5 QGCRSVFEFEK-----LNKISEGTYGIVYRAR----DKKSGEIVALKKVKMNVGRKEDCL 55
+G ++ +FE+ L ++ +G +G V R +GE+VA+KK++ +
Sbjct: 17 RGSHNMTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF 76
Query: 56 EYGFPISSLREINILLSFDHPSIVNVKEVVMD-DHDSVYMVMEYMEH-DLKWLMESMKQP 113
E REI IL S H +IV K V ++ ++MEY+ + L+ ++ K+
Sbjct: 77 E--------REIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER 128
Query: 114 FSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMS------RQY 167
++ Q+ +G++YL +HRDL T N+L+ N+ +KI DFG++ ++
Sbjct: 129 IDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEX 188
Query: 168 GSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA 213
+P S + WY APE L + K+S A D+WS G ++ EL
Sbjct: 189 XKVKEPGESPI--FWY-APESLTES-KFSVASDVWSFGVVLYELFT 230
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 114/252 (45%), Gaps = 38/252 (15%)
Query: 6 GCRSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLR 65
R +FE++ + +G +G V +AR+ A+KK++ E+ L + L
Sbjct: 1 SLRYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIR----HTEEKLS-----TILS 51
Query: 66 EINILLSFDHPSIVNVKEVVMDDHD------------SVYMVMEYMEHDLKW-LMESMKQ 112
E+ +L S +H +V ++ + ++++ MEY E+ + L+ S
Sbjct: 52 EVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENL 111
Query: 113 PFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPL- 171
E L Q+LE + Y+H ++HRDLK N+ ++ +KI DFG+++ L
Sbjct: 112 NQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLD 171
Query: 172 -------------KPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLF 218
TS + T Y A E+L G Y+ +DM+S+G I E++ P
Sbjct: 172 ILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY--PFS 229
Query: 219 SGTTEVDQIDKI 230
+G V+ + K+
Sbjct: 230 TGMERVNILKKL 241
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 115/227 (50%), Gaps = 18/227 (7%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILL 71
+F L + +G++G V + K + E+ A+K +K +V ++D +E ++ E +L
Sbjct: 21 DFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVE-----CTMVEKRVLA 75
Query: 72 SFDHPSIVNVKEVVMDDHDSVYMVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEGV 130
P + D +Y VMEY+ DL + ++ + + F ++ G+
Sbjct: 76 LPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGR-FKEPHAVFYAAEIAIGL 134
Query: 131 KYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQY---GSPLKPYTSLVVTLWYRAPE 187
+L +++RDLK N++L+++G +KI DFGM ++ G K + T Y APE
Sbjct: 135 FFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCG---TPDYIAPE 191
Query: 188 LLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTL 234
++ + Y +VD W+ G ++ E+LA + F G E D++F+++
Sbjct: 192 -IIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE----DELFQSI 233
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 102/211 (48%), Gaps = 21/211 (9%)
Query: 13 FEKLNKISEGTYGIV----YRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREIN 68
+K+ + EG +G V Y + +GE+VA+K +K G + L G+ REI
Sbjct: 11 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQ---LRSGWQ----REIE 63
Query: 69 ILLSFDHPSIVNVKEVVMDDHD-SVYMVMEYMEHDLKWLMESM-KQPFSTSEVKCLMLQL 126
IL + H IV K D + SV +VMEY+ L L + + + +++ Q+
Sbjct: 64 ILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYV--PLGSLRDYLPRHCVGLAQLLLFAQQI 121
Query: 127 LEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYT----SLVVTLW 182
EG+ YLH +HR L N+LL+N ++KI DFG+++ + Y W
Sbjct: 122 CEGMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFW 181
Query: 183 YRAPELLLGAKKYSTAVDMWSVGCIMAELLA 213
Y APE L K Y A D+WS G + ELL
Sbjct: 182 Y-APECLKECKFY-YASDVWSFGVTLYELLT 210
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 102/211 (48%), Gaps = 21/211 (9%)
Query: 13 FEKLNKISEGTYGIV----YRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREIN 68
+K+ + EG +G V Y + +GE+VA+K +K G + L G+ REI
Sbjct: 10 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQ---LRSGWQ----REIE 62
Query: 69 ILLSFDHPSIVNVKEVVMDDHD-SVYMVMEYMEHDLKWLMESM-KQPFSTSEVKCLMLQL 126
IL + H IV K D + SV +VMEY+ L L + + + +++ Q+
Sbjct: 63 ILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYV--PLGSLRDYLPRHCVGLAQLLLFAQQI 120
Query: 127 LEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYT----SLVVTLW 182
EG+ YLH +HR L N+LL+N ++KI DFG+++ + Y W
Sbjct: 121 CEGMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFW 180
Query: 183 YRAPELLLGAKKYSTAVDMWSVGCIMAELLA 213
Y APE L K Y A D+WS G + ELL
Sbjct: 181 Y-APECLKECKFY-YASDVWSFGVTLYELLT 209
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 113/226 (50%), Gaps = 29/226 (12%)
Query: 5 QGCRSVFEFEK-----LNKISEGTYGIVYRAR----DKKSGEIVALKKVKMNVGRKEDCL 55
+G ++ +FE+ L ++ +G +G V R +GE+VA+KK++ +
Sbjct: 17 RGSHNMTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF 76
Query: 56 EYGFPISSLREINILLSFDHPSIVNVKEVVMD-DHDSVYMVMEYMEH-DLKWLMESMKQP 113
E REI IL S H +IV K V ++ ++MEY+ + L+ ++ K+
Sbjct: 77 E--------REIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER 128
Query: 114 FSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMS------RQY 167
++ Q+ +G++YL +HRDL T N+L+ N+ +KI DFG++ ++
Sbjct: 129 IDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEX 188
Query: 168 GSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA 213
+P S + WY APE L + K+S A D+WS G ++ EL
Sbjct: 189 XKVKEPGESPI--FWY-APESLTES-KFSVASDVWSFGVVLYELFT 230
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 107/231 (46%), Gaps = 34/231 (14%)
Query: 8 RSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREI 67
R + +FE + + G +G+V+ A++K A+K++++ +E E +RE+
Sbjct: 2 RYLTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRL--PNRELARE-----KVMREV 54
Query: 68 NILLSFDHPSIV---------NVKEVVMDDHDSVYMVMEYM---EHDLKWLMESMKQPFS 115
L +HP IV N E + VY+ ++ + +LK M
Sbjct: 55 KALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEE 114
Query: 116 TSEVKCL--MLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGM---------S 164
CL LQ+ E V++LH ++HRDLK SN+ V+K+ DFG+
Sbjct: 115 RERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEE 174
Query: 165 RQYGSPLKPY---TSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELL 212
+ +P+ Y T V T Y +PE + G YS VD++S+G I+ ELL
Sbjct: 175 QTVLTPMPAYARHTGQVGTKLYMSPEQIHG-NSYSHKVDIFSLGLILFELL 224
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 142/323 (43%), Gaps = 71/323 (21%)
Query: 10 VFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINI 69
V +++ + + EG G V A ++ + E VA+K V M R DC P + +EI I
Sbjct: 5 VEDWDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMK--RAVDC-----PENIKKEICI 57
Query: 70 LLSFDHPSIVNVKEVVMDDHDSVYMVMEY---------MEHDLKWLMESMKQPFSTSEVK 120
+H ++V + + Y+ +EY +E D+ M +P + +
Sbjct: 58 NKMLNHENVVKFYGHRREGNIQ-YLFLEYCSGGELFDRIEPDI-----GMPEP----DAQ 107
Query: 121 CLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSR--QYGSPLKPYTSLV 178
QL+ GV YLH + HRD+K NLLL+ + LKI DFG++ +Y + + +
Sbjct: 108 RFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC 167
Query: 179 VTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPT 238
TL Y APELL + ++ VD+WS G ++ +LA
Sbjct: 168 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA------------------------- 202
Query: 239 ETIWPGLSELPGAKANFAKQPYNLLRKR----FPAASFTGSPVLSESGFDLLNRLLTYDP 294
ELP + + + Q Y+ +++ P +P+ LL+++L +P
Sbjct: 203 -------GELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA------LLHKILVENP 249
Query: 295 EKRITVDDALNHYWFHEVPLPKS 317
RIT+ D W+++ PL K
Sbjct: 250 SARITIPDIKKDRWYNK-PLKKG 271
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 104/202 (51%), Gaps = 17/202 (8%)
Query: 19 ISEGTYGIVYRARDKKSG---EI-VALKKVKMNVGRKEDCLEYGFPISSLREINILLSFD 74
I G +G VY+ K S E+ VA+K +K K+ + L E I+ F
Sbjct: 52 IGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQR-------VDFLGEAGIMGQFS 104
Query: 75 HPSIVNVKEVVMDDHDSVYMVMEYMEHD-LKWLMESMKQPFSTSEVKCLMLQLLEGVKYL 133
H +I+ + E V+ + + ++ EYME+ L + FS ++ ++ + G+KYL
Sbjct: 105 HHNIIRL-EGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYL 163
Query: 134 HDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQY-GSPLKPYTSL--VVTLWYRAPELLL 190
+ +HRDL N+L+N+ V K+ DFG+SR P YT+ + + + APE +
Sbjct: 164 ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPE-AI 222
Query: 191 GAKKYSTAVDMWSVGCIMAELL 212
+K+++A D+WS G +M E++
Sbjct: 223 SYRKFTSASDVWSFGIVMWEVM 244
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 112/224 (50%), Gaps = 12/224 (5%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILL 71
+F L + +G++G V + K + E+ A+K +K +V ++D +E ++ E +L
Sbjct: 342 DFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVE-----CTMVEKRVLA 396
Query: 72 SFDHPSIVNVKEVVMDDHDSVYMVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEGV 130
P + D +Y VMEY+ DL + ++ + + F ++ G+
Sbjct: 397 LPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGR-FKEPHAVFYAAEIAIGL 455
Query: 131 KYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLL 190
+L +++RDLK N++L+++G +KI DFGM ++ T Y APE ++
Sbjct: 456 FFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPE-II 514
Query: 191 GAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTL 234
+ Y +VD W+ G ++ E+LA + F G E D++F+++
Sbjct: 515 AYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE----DELFQSI 554
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 123/299 (41%), Gaps = 48/299 (16%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLR-EINILL 71
+E I G + V A +GE+VA+K + N G + ++ EI L
Sbjct: 12 YELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNT--------LGSDLPRIKTEIEALK 63
Query: 72 SFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVK 131
+ H I + V ++ + ++MV+EY + + S E + + Q++ V
Sbjct: 64 NLRHQHICQLYHV-LETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVSAVA 122
Query: 132 YLHDNWVLHRDLKTSNLLLNNQGVLKICDFGM-SRQYGSPLKPYTSLVVTLWYRAPELLL 190
Y+H HRDLK NLL + LK+ DFG+ ++ G+ + +L Y APEL+
Sbjct: 123 YVHSQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYAAPELIQ 182
Query: 191 GAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPG 250
G + D+WS+G ++ L+ LP
Sbjct: 183 GKSYLGSEADVWSMGILLYVLMC--------------------------------GFLPF 210
Query: 251 AKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWF 309
N ++R ++ + LS S LL ++L DP+KRI++ + LNH W
Sbjct: 211 DDDNVMALYKKIMRGKYDVPKW-----LSPSSILLLQQMLQVDPKKRISMKNLLNHPWI 264
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 105/210 (50%), Gaps = 24/210 (11%)
Query: 16 LNKISEGTYGIVYRAR----DKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILL 71
L ++ +G +G V R +GE+VA+KK++ + E REI IL
Sbjct: 46 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE--------REIEILK 97
Query: 72 SFDHPSIVNVKEVVMD-DHDSVYMVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEG 129
S H +IV K V ++ ++MEY+ + L+ ++ K+ ++ Q+ +G
Sbjct: 98 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 157
Query: 130 VKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMS------RQYGSPLKPYTSLVVTLWY 183
++YL +HRDL T N+L+ N+ +KI DFG++ ++ +P S + WY
Sbjct: 158 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI--FWY 215
Query: 184 RAPELLLGAKKYSTAVDMWSVGCIMAELLA 213
APE L + K+S A D+WS G ++ EL
Sbjct: 216 -APESLTES-KFSVASDVWSFGVVLYELFT 243
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 104/202 (51%), Gaps = 16/202 (7%)
Query: 19 ISEGTYGIVYRARDK---KSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDH 75
+ G +G V R K K VA+K +K+ K+ F L E +I+ FDH
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ---RRDF----LGEASIMGQFDH 105
Query: 76 PSIVNVKEVVMDDHDSVYMVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLH 134
P+I+ ++ VV V +V E ME+ L + F+ ++ ++ + G+KYL
Sbjct: 106 PNIIRLEGVVTKSK-PVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS 164
Query: 135 DNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQY-GSPLKPYTSL--VVTLWYRAPELLLG 191
D +HRDL N+L+N+ V K+ DFG+SR P YT+ + + + +PE +
Sbjct: 165 DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE-AIA 223
Query: 192 AKKYSTAVDMWSVGCIMAELLA 213
+K+++A D+WS G ++ E+++
Sbjct: 224 YRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 104/202 (51%), Gaps = 16/202 (7%)
Query: 19 ISEGTYGIVYRARDK---KSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDH 75
+ G +G V R K K VA+K +K+ K+ F L E +I+ FDH
Sbjct: 24 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ---RRDF----LGEASIMGQFDH 76
Query: 76 PSIVNVKEVVMDDHDSVYMVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLH 134
P+I+ ++ VV V +V E ME+ L + F+ ++ ++ + G+KYL
Sbjct: 77 PNIIRLEGVVTKSK-PVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS 135
Query: 135 DNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQY-GSPLKPYTSL--VVTLWYRAPELLLG 191
D +HRDL N+L+N+ V K+ DFG+SR P YT+ + + + +PE +
Sbjct: 136 DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE-AIA 194
Query: 192 AKKYSTAVDMWSVGCIMAELLA 213
+K+++A D+WS G ++ E+++
Sbjct: 195 YRKFTSASDVWSYGIVLWEVMS 216
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 105/210 (50%), Gaps = 24/210 (11%)
Query: 16 LNKISEGTYGIVYRAR----DKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILL 71
L ++ +G +G V R +GE+VA+KK++ + E REI IL
Sbjct: 22 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE--------REIEILK 73
Query: 72 SFDHPSIVNVKEVVMD-DHDSVYMVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEG 129
S H +IV K V ++ ++MEY+ + L+ ++ K+ ++ Q+ +G
Sbjct: 74 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 133
Query: 130 VKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMS------RQYGSPLKPYTSLVVTLWY 183
++YL +HRDL T N+L+ N+ +KI DFG++ ++ +P S + WY
Sbjct: 134 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI--FWY 191
Query: 184 RAPELLLGAKKYSTAVDMWSVGCIMAELLA 213
APE L + K+S A D+WS G ++ EL
Sbjct: 192 -APESLTES-KFSVASDVWSFGVVLYELFT 219
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 106/216 (49%), Gaps = 33/216 (15%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINI-L 70
+ E + ++ G YG+V + R SG+I+A+K+++ V +E L +++I +
Sbjct: 52 DLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQ-------KRLLMDLDISM 104
Query: 71 LSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESM---KQPFSTSEVKCLMLQLL 127
+ D P V + + D V++ ME M+ L + + Q + + + ++
Sbjct: 105 RTVDCPFTVTFYGALFREGD-VWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIV 163
Query: 128 EGVKYLHDNW-VLHRDLKTSNLLLNNQGVLKICDFGMS--------RQYGSPLKPYTSLV 178
+ +++LH V+HRD+K SN+L+N G +K+CDFG+S + + KPY
Sbjct: 164 KALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTIDAGCKPYM--- 220
Query: 179 VTLWYRAPELL---LGAKKYSTAVDMWSVGCIMAEL 211
APE + L K YS D+WS+G M EL
Sbjct: 221 ------APERINPELNQKGYSVKSDIWSLGITMIEL 250
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 105/210 (50%), Gaps = 24/210 (11%)
Query: 16 LNKISEGTYGIVYRAR----DKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILL 71
L ++ +G +G V R +GE+VA+KK++ + E REI IL
Sbjct: 21 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE--------REIEILK 72
Query: 72 SFDHPSIVNVKEVVMD-DHDSVYMVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEG 129
S H +IV K V ++ ++MEY+ + L+ ++ K+ ++ Q+ +G
Sbjct: 73 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 132
Query: 130 VKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMS------RQYGSPLKPYTSLVVTLWY 183
++YL +HRDL T N+L+ N+ +KI DFG++ ++ +P S + WY
Sbjct: 133 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI--FWY 190
Query: 184 RAPELLLGAKKYSTAVDMWSVGCIMAELLA 213
APE L + K+S A D+WS G ++ EL
Sbjct: 191 -APESLTES-KFSVASDVWSFGVVLYELFT 218
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 105/210 (50%), Gaps = 24/210 (11%)
Query: 16 LNKISEGTYGIVYRAR----DKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILL 71
L ++ +G +G V R +GE+VA+KK++ + E REI IL
Sbjct: 15 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE--------REIEILK 66
Query: 72 SFDHPSIVNVKEVVMD-DHDSVYMVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEG 129
S H +IV K V ++ ++MEY+ + L+ ++ K+ ++ Q+ +G
Sbjct: 67 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 126
Query: 130 VKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMS------RQYGSPLKPYTSLVVTLWY 183
++YL +HRDL T N+L+ N+ +KI DFG++ ++ +P S + WY
Sbjct: 127 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI--FWY 184
Query: 184 RAPELLLGAKKYSTAVDMWSVGCIMAELLA 213
APE L + K+S A D+WS G ++ EL
Sbjct: 185 -APESLTES-KFSVASDVWSFGVVLYELFT 212
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 105/210 (50%), Gaps = 24/210 (11%)
Query: 16 LNKISEGTYGIVYRAR----DKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILL 71
L ++ +G +G V R +GE+VA+KK++ + E REI IL
Sbjct: 19 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE--------REIEILK 70
Query: 72 SFDHPSIVNVKEVVMD-DHDSVYMVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEG 129
S H +IV K V ++ ++MEY+ + L+ ++ K+ ++ Q+ +G
Sbjct: 71 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 130
Query: 130 VKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMS------RQYGSPLKPYTSLVVTLWY 183
++YL +HRDL T N+L+ N+ +KI DFG++ ++ +P S + WY
Sbjct: 131 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI--FWY 188
Query: 184 RAPELLLGAKKYSTAVDMWSVGCIMAELLA 213
APE L + K+S A D+WS G ++ EL
Sbjct: 189 -APESLTES-KFSVASDVWSFGVVLYELFT 216
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 108/204 (52%), Gaps = 18/204 (8%)
Query: 19 ISEGTYGIVYRARDKKSGE---IVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDH 75
I G +G V R R K G+ VA+K +K ++ E+ L E +I+ F+H
Sbjct: 24 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQR-REF------LSEASIMGQFEH 76
Query: 76 PSIVNVKEVVMDDHDSVYMVMEYMEHD-LKWLMESMKQPFSTSEVKCLMLQLLEGVKYLH 134
P+I+ ++ VV + V ++ E+ME+ L + F+ ++ ++ + G++YL
Sbjct: 77 PNIIRLEGVVTNSM-PVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLA 135
Query: 135 DNWVLHRDLKTSNLLLNNQGVLKICDFGMSR---QYGSPLKPYTSL--VVTLWYRAPELL 189
+ +HRDL N+L+N+ V K+ DFG+SR + S +SL + + + APE
Sbjct: 136 EMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPE-A 194
Query: 190 LGAKKYSTAVDMWSVGCIMAELLA 213
+ +K+++A D WS G +M E+++
Sbjct: 195 IAFRKFTSASDAWSYGIVMWEVMS 218
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 105/210 (50%), Gaps = 24/210 (11%)
Query: 16 LNKISEGTYGIVYRAR----DKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILL 71
L ++ +G +G V R +GE+VA+KK++ + E REI IL
Sbjct: 18 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE--------REIEILK 69
Query: 72 SFDHPSIVNVKEVVMD-DHDSVYMVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEG 129
S H +IV K V ++ ++MEY+ + L+ ++ K+ ++ Q+ +G
Sbjct: 70 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 129
Query: 130 VKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMS------RQYGSPLKPYTSLVVTLWY 183
++YL +HRDL T N+L+ N+ +KI DFG++ ++ +P S + WY
Sbjct: 130 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI--FWY 187
Query: 184 RAPELLLGAKKYSTAVDMWSVGCIMAELLA 213
APE L + K+S A D+WS G ++ EL
Sbjct: 188 -APESLTES-KFSVASDVWSFGVVLYELFT 215
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 105/210 (50%), Gaps = 24/210 (11%)
Query: 16 LNKISEGTYGIVYRAR----DKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILL 71
L ++ +G +G V R +GE+VA+KK++ + E REI IL
Sbjct: 20 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE--------REIEILK 71
Query: 72 SFDHPSIVNVKEVVMD-DHDSVYMVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEG 129
S H +IV K V ++ ++MEY+ + L+ ++ K+ ++ Q+ +G
Sbjct: 72 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 131
Query: 130 VKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMS------RQYGSPLKPYTSLVVTLWY 183
++YL +HRDL T N+L+ N+ +KI DFG++ ++ +P S + WY
Sbjct: 132 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI--FWY 189
Query: 184 RAPELLLGAKKYSTAVDMWSVGCIMAELLA 213
APE L + K+S A D+WS G ++ EL
Sbjct: 190 -APESLTES-KFSVASDVWSFGVVLYELFT 217
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 103/210 (49%), Gaps = 21/210 (10%)
Query: 13 FEKLNKISEGTYGIV----YRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREIN 68
+K+ + EG +G V Y + +GE+VA+K +K + G + G+ +EI+
Sbjct: 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQH---RSGWK----QEID 85
Query: 69 ILLSFDHPSIVNVKEVVMD-DHDSVYMVMEYMEHDLKWLMESM-KQPFSTSEVKCLMLQL 126
IL + H I+ K D S+ +VMEY+ L L + + + +++ Q+
Sbjct: 86 ILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVP--LGSLRDYLPRHSIGLAQLLLFAQQI 143
Query: 127 LEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYT----SLVVTLW 182
EG+ YLH +HRDL N+LL+N ++KI DFG+++ + Y W
Sbjct: 144 CEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFW 203
Query: 183 YRAPELLLGAKKYSTAVDMWSVGCIMAELL 212
Y APE L K Y A D+WS G + ELL
Sbjct: 204 Y-APECLKEYKFY-YASDVWSFGVTLYELL 231
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 105/210 (50%), Gaps = 24/210 (11%)
Query: 16 LNKISEGTYGIVYRAR----DKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILL 71
L ++ +G +G V R +GE+VA+KK++ + E REI IL
Sbjct: 14 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE--------REIEILK 65
Query: 72 SFDHPSIVNVKEVVMD-DHDSVYMVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEG 129
S H +IV K V ++ ++MEY+ + L+ ++ K+ ++ Q+ +G
Sbjct: 66 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 125
Query: 130 VKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMS------RQYGSPLKPYTSLVVTLWY 183
++YL +HRDL T N+L+ N+ +KI DFG++ ++ +P S + WY
Sbjct: 126 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI--FWY 183
Query: 184 RAPELLLGAKKYSTAVDMWSVGCIMAELLA 213
APE L + K+S A D+WS G ++ EL
Sbjct: 184 -APESLTES-KFSVASDVWSFGVVLYELFT 211
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 105/210 (50%), Gaps = 24/210 (11%)
Query: 16 LNKISEGTYGIVYRAR----DKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILL 71
L ++ +G +G V R +GE+VA+KK++ + E REI IL
Sbjct: 13 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE--------REIEILK 64
Query: 72 SFDHPSIVNVKEVVMD-DHDSVYMVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEG 129
S H +IV K V ++ ++MEY+ + L+ ++ K+ ++ Q+ +G
Sbjct: 65 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 124
Query: 130 VKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMS------RQYGSPLKPYTSLVVTLWY 183
++YL +HRDL T N+L+ N+ +KI DFG++ ++ +P S + WY
Sbjct: 125 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI--FWY 182
Query: 184 RAPELLLGAKKYSTAVDMWSVGCIMAELLA 213
APE L + K+S A D+WS G ++ EL
Sbjct: 183 -APESLTES-KFSVASDVWSFGVVLYELFT 210
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 131/302 (43%), Gaps = 51/302 (16%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKV--KMNVGRKEDCLEYGFPISSLREINIL 70
FE+L K G + +V R +G+ A K + K R LE RE I
Sbjct: 27 FEELGK---GAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLE--------REARIC 75
Query: 71 LSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGV 130
HP+IV + + + ++ Y++ + + + ++ +S ++ + Q+LE V
Sbjct: 76 RLLKHPNIVRLHDSISEEGHH-YLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAV 134
Query: 131 KYLHDNWVLHRDLKTSNLLLNNQ---GVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPE 187
+ H V+HRDLK NLLL ++ +K+ DFG++ + + + T Y +PE
Sbjct: 135 LHCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPE 194
Query: 188 LLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSE 247
+L Y VD+W+ G I+ LL P F + DQ +++ + I G +
Sbjct: 195 VLR-KDPYGKPVDLWACGVILYILLVGYPPF---WDEDQ-HRLY-------QQIKAGAYD 242
Query: 248 LPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHY 307
P + + ++ DL+N++LT +P KRIT +AL H
Sbjct: 243 FPSPEWD----------------------TVTPEAKDLINKMLTINPSKRITAAEALKHP 280
Query: 308 WF 309
W
Sbjct: 281 WI 282
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 105/210 (50%), Gaps = 24/210 (11%)
Query: 16 LNKISEGTYGIVYRAR----DKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILL 71
L ++ +G +G V R +GE+VA+KK++ + E REI IL
Sbjct: 15 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE--------REIEILK 66
Query: 72 SFDHPSIVNVKEVVMD-DHDSVYMVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEG 129
S H +IV K V ++ ++MEY+ + L+ ++ K+ ++ Q+ +G
Sbjct: 67 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 126
Query: 130 VKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMS------RQYGSPLKPYTSLVVTLWY 183
++YL +HRDL T N+L+ N+ +KI DFG++ ++ +P S + WY
Sbjct: 127 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI--FWY 184
Query: 184 RAPELLLGAKKYSTAVDMWSVGCIMAELLA 213
APE L + K+S A D+WS G ++ EL
Sbjct: 185 -APESLTES-KFSVASDVWSFGVVLYELFT 212
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 142/318 (44%), Gaps = 56/318 (17%)
Query: 5 QGC-RSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISS 63
QG S + K + G +G V++ + +G +A K +K + ++ ++
Sbjct: 82 QGAVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVK------- 134
Query: 64 LREINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCL- 122
EI+++ DH +++ + + +D + +VMEY++ + + + ++ +E+ +
Sbjct: 135 -NEISVMNQLDHANLIQLYDAFESKND-IVLVMEYVDGG-ELFDRIIDESYNLTELDTIL 191
Query: 123 -MLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGV--LKICDFGMSRQYGSPLKPYTSLVV 179
M Q+ EG++++H ++LH DLK N+L N+ +KI DFG++R+Y KP L V
Sbjct: 192 FMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRY----KPREKLKV 247
Query: 180 TLW---YRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGT 236
+ APE ++ S DMWSVG I LL+ F G + + ++ I
Sbjct: 248 NFGTPEFLAPE-VVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILAC--- 303
Query: 237 PTETIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEK 296
++L + F +SE + +++LL +
Sbjct: 304 ----------------------RWDLEDEEFQD--------ISEEAKEFISKLLIKEKSW 333
Query: 297 RITVDDALNHYWFHEVPL 314
RI+ +AL H W + L
Sbjct: 334 RISASEALKHPWLSDHKL 351
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 116/238 (48%), Gaps = 34/238 (14%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINI-L 70
+ E + ++ G YG+V + R SG+I+A+K+++ V +E L +++I +
Sbjct: 8 DLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQK-------RLLMDLDISM 60
Query: 71 LSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESM---KQPFSTSEVKCLMLQLL 127
+ D P V + + D V++ ME M+ L + + Q + + + ++
Sbjct: 61 RTVDCPFTVTFYGALFREGD-VWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIV 119
Query: 128 EGVKYLHDNW-VLHRDLKTSNLLLNNQGVLKICDFGMS--------RQYGSPLKPYTSLV 178
+ +++LH V+HRD+K SN+L+N G +K+CDFG+S + + KPY
Sbjct: 120 KALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDAGCKPYM--- 176
Query: 179 VTLWYRAPELL---LGAKKYSTAVDMWSVGCIMAEL-LAKKPLFSGTTEVDQIDKIFK 232
APE + L K YS D+WS+G M EL + + P S T Q+ ++ +
Sbjct: 177 ------APERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVE 228
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 105/210 (50%), Gaps = 24/210 (11%)
Query: 16 LNKISEGTYGIVYRAR----DKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILL 71
L ++ +G +G V R +GE+VA+KK++ + E REI IL
Sbjct: 18 LRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE--------REIEILK 69
Query: 72 SFDHPSIVNVKEVVMD-DHDSVYMVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEG 129
S H +IV K V ++ ++ME++ + L+ ++ K+ ++ Q+ +G
Sbjct: 70 SLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICKG 129
Query: 130 VKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMS------RQYGSPLKPYTSLVVTLWY 183
++YL +HRDL T N+L+ N+ +KI DFG++ ++ +P S + WY
Sbjct: 130 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI--FWY 187
Query: 184 RAPELLLGAKKYSTAVDMWSVGCIMAELLA 213
APE L + K+S A D+WS G ++ EL
Sbjct: 188 -APESLTES-KFSVASDVWSFGVVLYELFT 215
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 85/154 (55%), Gaps = 6/154 (3%)
Query: 64 LREINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEH-DLKWLMESMKQPFSTSEVKCL 122
L E +I+ FDHP+I+ ++ VV ++ +V EYME+ L + + F+ ++ +
Sbjct: 98 LSEASIMGQFDHPNIIRLEGVVTRGRLAM-IVTEYMENGSLDTFLRTHDGQFTIMQLVGM 156
Query: 123 MLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYG---SPLKPYTSLVV 179
+ + G++YL D +HRDL N+L+++ V K+ DFG+SR T +
Sbjct: 157 LRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKI 216
Query: 180 TLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA 213
+ + APE + + +S+A D+WS G +M E+LA
Sbjct: 217 PIRWTAPE-AIAFRTFSSASDVWSFGVVMWEVLA 249
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 104/211 (49%), Gaps = 21/211 (9%)
Query: 13 FEKLNKISEGTYGIV----YRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREIN 68
+K+ + EG +G V Y + +GE+VA+K +K + G + G+ +EI+
Sbjct: 16 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQH---RSGWK----QEID 68
Query: 69 ILLSFDHPSIVNVKEVVMDDHD-SVYMVMEYMEHDLKWLMESM-KQPFSTSEVKCLMLQL 126
IL + H I+ K D + S+ +VMEY+ L L + + + +++ Q+
Sbjct: 69 ILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVP--LGSLRDYLPRHSIGLAQLLLFAQQI 126
Query: 127 LEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYT----SLVVTLW 182
EG+ YLH +HR+L N+LL+N ++KI DFG+++ + Y W
Sbjct: 127 CEGMAYLHSQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFW 186
Query: 183 YRAPELLLGAKKYSTAVDMWSVGCIMAELLA 213
Y APE L K Y A D+WS G + ELL
Sbjct: 187 Y-APECLKEYKFY-YASDVWSFGVTLYELLT 215
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/317 (23%), Positives = 136/317 (42%), Gaps = 54/317 (17%)
Query: 1 MNMLQGCRSVFEFEKLNKISEGTYGIVYRARDKKSGE-----IVALKKVKMNVGRKEDCL 55
M + R E++ ++ +G + +V R +G+ I+ KK+ R L
Sbjct: 1 MATITCTRFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLS---ARDHQKL 57
Query: 56 EYGFPISSLREINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFS 115
E RE I HP+IV + + + ++ Y++ + + + ++ +S
Sbjct: 58 E--------REARICRLLKHPNIVRLHDSISEEGHH-YLIFDLVTGGELFEDIVAREYYS 108
Query: 116 TSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQ---GVLKICDFGMSRQYGSPLK 172
++ + Q+LE V + H V+HR+LK NLLL ++ +K+ DFG++ + +
Sbjct: 109 EADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQ 168
Query: 173 PYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFK 232
+ T Y +PE+L Y VD+W+ G I+ LL P F + DQ +++
Sbjct: 169 AWFGFAGTPGYLSPEVLR-KDPYGKPVDLWACGVILYILLVGYPPF---WDEDQ-HRLY- 222
Query: 233 TLGTPTETIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTY 292
+ I G + P + + ++ DL+N++LT
Sbjct: 223 ------QQIKAGAYDFPSPEWD----------------------TVTPEAKDLINKMLTI 254
Query: 293 DPEKRITVDDALNHYWF 309
+P KRIT +AL H W
Sbjct: 255 NPSKRITAAEALKHPWI 271
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 105/210 (50%), Gaps = 24/210 (11%)
Query: 16 LNKISEGTYGIVYRAR----DKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILL 71
L ++ +G +G V R +GE+VA+KK++ + E REI IL
Sbjct: 18 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE--------REIEILK 69
Query: 72 SFDHPSIVNVKEVVMD-DHDSVYMVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEG 129
S H +IV K V ++ ++MEY+ + L+ +++ + ++ Q+ +G
Sbjct: 70 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICKG 129
Query: 130 VKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMS------RQYGSPLKPYTSLVVTLWY 183
++YL +HRDL T N+L+ N+ +KI DFG++ ++ +P S + WY
Sbjct: 130 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI--FWY 187
Query: 184 RAPELLLGAKKYSTAVDMWSVGCIMAELLA 213
APE L + K+S A D+WS G ++ EL
Sbjct: 188 -APESLTES-KFSVASDVWSFGVVLYELFT 215
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 104/211 (49%), Gaps = 21/211 (9%)
Query: 13 FEKLNKISEGTYGIV----YRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREIN 68
+K+ + EG +G V Y + +GE+VA+K +K + G + G+ +EI+
Sbjct: 16 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQH---RSGWK----QEID 68
Query: 69 ILLSFDHPSIVNVKEVVMDDHD-SVYMVMEYMEHDLKWLMESM-KQPFSTSEVKCLMLQL 126
IL + H I+ K D + S+ +VMEY+ L L + + + +++ Q+
Sbjct: 69 ILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVP--LGSLRDYLPRHSIGLAQLLLFAQQI 126
Query: 127 LEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYT----SLVVTLW 182
EG+ YLH +HR+L N+LL+N ++KI DFG+++ + Y W
Sbjct: 127 CEGMAYLHAQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFW 186
Query: 183 YRAPELLLGAKKYSTAVDMWSVGCIMAELLA 213
Y APE L K Y A D+WS G + ELL
Sbjct: 187 Y-APECLKEYKFY-YASDVWSFGVTLYELLT 215
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 115/249 (46%), Gaps = 31/249 (12%)
Query: 83 EVVMDDHDSVYMVMEYMEHD--LKW------LMESMKQPFSTSEVKCLMLQLLEGVKYLH 134
E ++ ++D VY++ EYME+D LK+ L ++ +KC++ +L Y+H
Sbjct: 109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIH 168
Query: 135 DNW-VLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGAK 193
+ + HRD+K SN+L++ G +K+ DFG S +Y K S T + PE
Sbjct: 169 NEKNICHRDVKPSNILMDKNGRVKLSDFGES-EYMVDKKIKGSR-GTYEFMPPEFFSNES 226
Query: 194 KYSTA-VDMWSVG-CIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGA 251
Y+ A VD+WS+G C+ P + V+ + I T+ I E P
Sbjct: 227 SYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNI------RTKNI-----EYPLD 275
Query: 252 KANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHE 311
+ +F Y L K+ S + LS D L L +P +RIT +DAL H W +
Sbjct: 276 RNHFL---YPLTNKK----STCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHEWLAD 328
Query: 312 VPLPKSKDF 320
+ ++F
Sbjct: 329 TNIEDLREF 337
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 116/223 (52%), Gaps = 21/223 (9%)
Query: 19 ISEGTYGIVYRARDKKSGE---IVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDH 75
I G +G V K G+ VA+K +K K+ F L E +I+ FDH
Sbjct: 15 IGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQ---RRDF----LSEASIMGQFDH 67
Query: 76 PSIVNVKEVVMDDHDSVYMVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLH 134
P++++++ VV V ++ E+ME+ L + F+ ++ ++ + G+KYL
Sbjct: 68 PNVIHLEGVVTKS-TPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLA 126
Query: 135 DNWVLHRDLKTSNLLLNNQGVLKICDFGMSR--QYGSPLKPYTSLV---VTLWYRAPELL 189
D +HR L N+L+N+ V K+ DFG+SR + + YTS + + + + APE
Sbjct: 127 DMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPE-A 185
Query: 190 LGAKKYSTAVDMWSVGCIMAELLA--KKPLFSGTTEVDQIDKI 230
+ +K+++A D+WS G +M E+++ ++P + T + D I+ I
Sbjct: 186 IQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQ-DVINAI 227
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 102/220 (46%), Gaps = 8/220 (3%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILL 71
+F L I +G++G V AR K A+K V +K+ L+ + E N+LL
Sbjct: 39 DFHFLKVIGKGSFGKVLLARHKAEEVFYAVK-----VLQKKAILKKKEEKHIMSERNVLL 93
Query: 72 -SFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGV 130
+ HP +V + D +Y V++Y+ + ++ F + ++ +
Sbjct: 94 KNVKHPFLVGL-HFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASAL 152
Query: 131 KYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLL 190
YLH +++RDLK N+LL++QG + + DFG+ ++ ++ T Y APE +L
Sbjct: 153 GYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPE-VL 211
Query: 191 GAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKI 230
+ Y VD W +G ++ E+L P F + D I
Sbjct: 212 HKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNI 251
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 108/208 (51%), Gaps = 22/208 (10%)
Query: 16 LNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDH 75
L ++ G +G+V + + + VA+K +K +++ +E E ++++ H
Sbjct: 29 LKELGTGQFGVVKYGKWRGQYD-VAIKMIKEGSMSEDEFIE---------EAKVMMNLSH 78
Query: 76 PSIVNVKEVVMDDHDSVYMVMEYMEHD--LKWLMESMKQPFSTSEVKCLMLQLLEGVKYL 133
+V + V ++++ EYM + L +L E M+ F T ++ + + E ++YL
Sbjct: 79 EKLVQLYGVCTKQR-PIFIITEYMANGCLLNYLRE-MRHRFQTQQLLEMCKDVCEAMEYL 136
Query: 134 HDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVT---LWYRAPELLL 190
LHRDL N L+N+QGV+K+ DFG+SR YTS V + + + PE+L+
Sbjct: 137 ESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD--DEYTSSVGSKFPVRWSPPEVLM 194
Query: 191 GAKKYSTAVDMWSVGCIMAEL--LAKKP 216
+ K+S+ D+W+ G +M E+ L K P
Sbjct: 195 YS-KFSSKSDIWAFGVLMWEIYSLGKMP 221
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 108/208 (51%), Gaps = 22/208 (10%)
Query: 16 LNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDH 75
L ++ G +G+V + + + VA+K +K +++ +E E ++++ H
Sbjct: 20 LKELGTGQFGVVKYGKWRGQYD-VAIKMIKEGSMSEDEFIE---------EAKVMMNLSH 69
Query: 76 PSIVNVKEVVMDDHDSVYMVMEYMEHD--LKWLMESMKQPFSTSEVKCLMLQLLEGVKYL 133
+V + V ++++ EYM + L +L E M+ F T ++ + + E ++YL
Sbjct: 70 EKLVQLYGVCTKQR-PIFIITEYMANGCLLNYLRE-MRHRFQTQQLLEMCKDVCEAMEYL 127
Query: 134 HDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVT---LWYRAPELLL 190
LHRDL N L+N+QGV+K+ DFG+SR YTS V + + + PE+L+
Sbjct: 128 ESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD--EYTSSVGSKFPVRWSPPEVLM 185
Query: 191 GAKKYSTAVDMWSVGCIMAEL--LAKKP 216
+ K+S+ D+W+ G +M E+ L K P
Sbjct: 186 YS-KFSSKSDIWAFGVLMWEIYSLGKMP 212
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 108/208 (51%), Gaps = 22/208 (10%)
Query: 16 LNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDH 75
L ++ G +G+V + + + VA+K +K +++ +E E ++++ H
Sbjct: 9 LKELGTGQFGVVKYGKWRGQYD-VAIKMIKEGSMSEDEFIE---------EAKVMMNLSH 58
Query: 76 PSIVNVKEVVMDDHDSVYMVMEYMEHD--LKWLMESMKQPFSTSEVKCLMLQLLEGVKYL 133
+V + V ++++ EYM + L +L E M+ F T ++ + + E ++YL
Sbjct: 59 EKLVQLYGVCTKQR-PIFIITEYMANGCLLNYLRE-MRHRFQTQQLLEMCKDVCEAMEYL 116
Query: 134 HDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVT---LWYRAPELLL 190
LHRDL N L+N+QGV+K+ DFG+SR YTS V + + + PE+L+
Sbjct: 117 ESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD--EYTSSVGSKFPVRWSPPEVLM 174
Query: 191 GAKKYSTAVDMWSVGCIMAEL--LAKKP 216
+ K+S+ D+W+ G +M E+ L K P
Sbjct: 175 YS-KFSSKSDIWAFGVLMWEIYSLGKMP 201
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 108/208 (51%), Gaps = 22/208 (10%)
Query: 16 LNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDH 75
L ++ G +G+V + + + VA+K +K +++ +E E ++++ H
Sbjct: 13 LKELGTGQFGVVKYGKWRGQYD-VAIKMIKEGSMSEDEFIE---------EAKVMMNLSH 62
Query: 76 PSIVNVKEVVMDDHDSVYMVMEYMEHD--LKWLMESMKQPFSTSEVKCLMLQLLEGVKYL 133
+V + V ++++ EYM + L +L E M+ F T ++ + + E ++YL
Sbjct: 63 EKLVQLYGVCTKQR-PIFIITEYMANGCLLNYLRE-MRHRFQTQQLLEMCKDVCEAMEYL 120
Query: 134 HDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVT---LWYRAPELLL 190
LHRDL N L+N+QGV+K+ DFG+SR YTS V + + + PE+L+
Sbjct: 121 ESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD--EYTSSVGSKFPVRWSPPEVLM 178
Query: 191 GAKKYSTAVDMWSVGCIMAEL--LAKKP 216
+ K+S+ D+W+ G +M E+ L K P
Sbjct: 179 YS-KFSSKSDIWAFGVLMWEIYSLGKMP 205
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 108/208 (51%), Gaps = 22/208 (10%)
Query: 16 LNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDH 75
L ++ G +G+V + + + VA+K +K +++ +E E ++++ H
Sbjct: 14 LKELGTGQFGVVKYGKWRGQYD-VAIKMIKEGSMSEDEFIE---------EAKVMMNLSH 63
Query: 76 PSIVNVKEVVMDDHDSVYMVMEYMEHD--LKWLMESMKQPFSTSEVKCLMLQLLEGVKYL 133
+V + V ++++ EYM + L +L E M+ F T ++ + + E ++YL
Sbjct: 64 EKLVQLYGVCTKQR-PIFIITEYMANGCLLNYLRE-MRHRFQTQQLLEMCKDVCEAMEYL 121
Query: 134 HDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVT---LWYRAPELLL 190
LHRDL N L+N+QGV+K+ DFG+SR YTS V + + + PE+L+
Sbjct: 122 ESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD--EYTSSVGSKFPVRWSPPEVLM 179
Query: 191 GAKKYSTAVDMWSVGCIMAEL--LAKKP 216
+ K+S+ D+W+ G +M E+ L K P
Sbjct: 180 YS-KFSSKSDIWAFGVLMWEIYSLGKMP 206
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 92/200 (46%), Gaps = 12/200 (6%)
Query: 17 NKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHP 76
+I G +G V+ R + +VA+K + + L L+E IL + HP
Sbjct: 120 EQIGRGNFGEVFSGRLRADNTLVAVKSCR-------ETLPPDLKAKFLQEARILKQYSHP 172
Query: 77 SIVNVKEVVMDDHDSVYMVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHD 135
+IV + V +Y+VME ++ D + + + ++ G++YL
Sbjct: 173 NIVRLIGVCTQKQ-PIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLES 231
Query: 136 NWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLV--VTLWYRAPELLLGAK 193
+HRDL N L+ + VLKI DFGMSR+ + + + V + + APE L
Sbjct: 232 KCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPE-ALNYG 290
Query: 194 KYSTAVDMWSVGCIMAELLA 213
+YS+ D+WS G ++ E +
Sbjct: 291 RYSSESDVWSFGILLWETFS 310
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 106/213 (49%), Gaps = 13/213 (6%)
Query: 8 RSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREI 67
R +F+++ I G +G V++A+ + G+ +K+VK N + E ++ ++ L +
Sbjct: 8 RFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAEREVK---ALAKLDHV 64
Query: 68 NILL------SFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDL--KWLMESMKQPFSTSEV 119
NI+ FD+ + K +++ ME+ + +W+ + +
Sbjct: 65 NIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLA 124
Query: 120 KCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVV 179
L Q+ +GV Y+H +++RDLK SN+ L + +KI DFG+ + K S
Sbjct: 125 LELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRXRS-KG 183
Query: 180 TLWYRAPELLLGAKKYSTAVDMWSVGCIMAELL 212
TL Y +PE + ++ Y VD++++G I+AELL
Sbjct: 184 TLRYMSPE-QISSQDYGKEVDLYALGLILAELL 215
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/311 (21%), Positives = 135/311 (43%), Gaps = 49/311 (15%)
Query: 13 FEKLNKISEGTYGIVYRAR---DKKSGEIVALKKVK-MNVGRKEDCLEYGFPISSLREIN 68
FE L + G YG V+ R +G++ A+K +K + +K E+ + E
Sbjct: 56 FELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEH-----TRTERQ 110
Query: 69 ILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLE 128
+L + ++++++Y+ + S ++ F+ EV+ + +++
Sbjct: 111 VLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVL 170
Query: 129 GVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQY-GSPLKPYTSLVVTLWYRAPE 187
+++LH +++RD+K N+LL++ G + + DFG+S+++ + T+ Y AP+
Sbjct: 171 ALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPD 230
Query: 188 LLLGAKK-YSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLS 246
++ G + AVD WS+G +M ELL F+
Sbjct: 231 IVRGGDSGHDKAVDWWSLGVLMYELLTGASPFT--------------------------- 263
Query: 247 ELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRI-----TVD 301
+ G K + A+ +L+ P +S DL+ RLL DP+KR+ D
Sbjct: 264 -VDGEKNSQAEISRRILKSEPPYPQ-----EMSALAKDLIQRLLMKDPKKRLGCGPRDAD 317
Query: 302 DALNHYWFHEV 312
+ H +F ++
Sbjct: 318 EIKEHLFFQKI 328
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 103/212 (48%), Gaps = 21/212 (9%)
Query: 13 FEKLNKISEGTYGIV----YRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLR-EI 67
+++ + EG +G V Y +GE VA+K +K G G I+ L+ EI
Sbjct: 23 LKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESG--------GNHIADLKKEI 74
Query: 68 NILLSFDHPSIVNVKEVVMDDH-DSVYMVMEYM-EHDLKWLMESMKQPFSTSEVKCLMLQ 125
IL + H +IV K + +D + + ++ME++ LK + K + + +Q
Sbjct: 75 EILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQ 134
Query: 126 LLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYT----SLVVTL 181
+ +G+ YL +HRDL N+L+ ++ +KI DFG+++ + + T
Sbjct: 135 ICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVF 194
Query: 182 WYRAPELLLGAKKYSTAVDMWSVGCIMAELLA 213
WY APE L+ +K Y A D+WS G + ELL
Sbjct: 195 WY-APECLMQSKFY-IASDVWSFGVTLHELLT 224
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 102/239 (42%), Gaps = 36/239 (15%)
Query: 78 IVNVKEVVMDDHDSVYMVMEYMEHD--LKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHD 135
IV+V E + + +V E ++ + + Q F+ E + + E ++YLH
Sbjct: 120 IVDVYENLYAGRKCLLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAIQYLHS 179
Query: 136 NWVLHRDLKTSNLLLNNQ---GVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGA 192
+ HRD+K NLL ++ +LK+ DFG +++ S T+ T +Y APE +LG
Sbjct: 180 INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSH-NSLTTPCYTPYYVAPE-VLGP 237
Query: 193 KKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGAK 252
+KY + D WS+G I LL P F GL+ PG K
Sbjct: 238 EKYDKSCDXWSLGVIXYILLCGYPPFYSNH---------------------GLAISPGXK 276
Query: 253 ANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHE 311
Y FP ++ +SE L+ LL +P +R T+ + NH W +
Sbjct: 277 TRIRXGQYE-----FPNPEWSE---VSEEVKXLIRNLLKTEPTQRXTITEFXNHPWIXQ 327
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 99/221 (44%), Gaps = 44/221 (19%)
Query: 19 ISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFD-HPS 77
++EG + VY A+D SG ALK++ N K + ++E+ + HP+
Sbjct: 36 LAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAI--------IQEVCFMKKLSGHPN 87
Query: 78 IVNV-------KEVVMDDHDSVYMVMEYMEHDLKWLMESM--KQPFSTSEVKCLMLQLLE 128
IV KE ++ E + L ++ M + P S V + Q
Sbjct: 88 IVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCR 147
Query: 129 GVKYLHDNW--VLHRDLKTSNLLLNNQGVLKICDFGM------------SRQYGSPLKPY 174
V+++H ++HRDLK NLLL+NQG +K+CDFG S Q + ++
Sbjct: 148 AVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEE 207
Query: 175 TSLVVTLWYRAPELL-------LGAKKYSTAVDMWSVGCIM 208
+ T YR PE++ +G K+ D+W++GCI+
Sbjct: 208 ITRNTTPMYRTPEIIDLYSNFPIGEKQ-----DIWALGCIL 243
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 92/200 (46%), Gaps = 12/200 (6%)
Query: 17 NKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHP 76
+I G +G V+ R + +VA+K + + L L+E IL + HP
Sbjct: 120 EQIGRGNFGEVFSGRLRADNTLVAVKSCR-------ETLPPDLKAKFLQEARILKQYSHP 172
Query: 77 SIVNVKEVVMDDHDSVYMVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHD 135
+IV + V +Y+VME ++ D + + + ++ G++YL
Sbjct: 173 NIVRLIGVCTQKQ-PIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLES 231
Query: 136 NWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLV--VTLWYRAPELLLGAK 193
+HRDL N L+ + VLKI DFGMSR+ + + + V + + APE L
Sbjct: 232 KCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPE-ALNYG 290
Query: 194 KYSTAVDMWSVGCIMAELLA 213
+YS+ D+WS G ++ E +
Sbjct: 291 RYSSESDVWSFGILLWETFS 310
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 103/212 (48%), Gaps = 21/212 (9%)
Query: 13 FEKLNKISEGTYGIV----YRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLR-EI 67
+++ + EG +G V Y +GE VA+K +K G G I+ L+ EI
Sbjct: 11 LKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESG--------GNHIADLKKEI 62
Query: 68 NILLSFDHPSIVNVKEVVMDDH-DSVYMVMEYM-EHDLKWLMESMKQPFSTSEVKCLMLQ 125
IL + H +IV K + +D + + ++ME++ LK + K + + +Q
Sbjct: 63 EILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQ 122
Query: 126 LLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYT----SLVVTL 181
+ +G+ YL +HRDL N+L+ ++ +KI DFG+++ + + T
Sbjct: 123 ICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVF 182
Query: 182 WYRAPELLLGAKKYSTAVDMWSVGCIMAELLA 213
WY APE L+ +K Y A D+WS G + ELL
Sbjct: 183 WY-APECLMQSKFY-IASDVWSFGVTLHELLT 212
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 113/238 (47%), Gaps = 21/238 (8%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILL 71
+ + L +I G YG V + K SG+I+A+K+++ V KE L ++++++
Sbjct: 23 DLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQ-------KQLLMDLDVVM 75
Query: 72 -SFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDL----KWLMESMKQPFSTSEVKCLMLQL 126
S D P IV + + D ++ ME M K++ + + + L
Sbjct: 76 RSSDCPYIVQFYGALFREGD-CWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLAT 134
Query: 127 LEGVKYLHDNW-VLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRA 185
++ + +L +N ++HRD+K SN+LL+ G +K+CDFG+S Q + T Y A
Sbjct: 135 VKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAK-TRDAGCRPYMA 193
Query: 186 PELL---LGAKKYSTAVDMWSVGCIMAELLAKK-PLFSGTTEVDQIDKIFKTLGTPTE 239
PE + + Y D+WS+G + EL + P + DQ+ ++ K G P +
Sbjct: 194 PERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVK--GDPPQ 249
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 99/203 (48%), Gaps = 25/203 (12%)
Query: 18 KISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPS 77
++ G++G V+R +DK++G A+KKV++ V R E E+ P
Sbjct: 65 RVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVE-------------ELVACAGLSSPR 111
Query: 78 IVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCL--MLQLLEGVKYLHD 135
IV + V + V + ME +E L + +KQ E + L + Q LEG++YLH
Sbjct: 112 IVPLYGAVREG-PWVNIFMELLEGGS--LGQLIKQMGCLPEDRALYYLGQALEGLEYLHT 168
Query: 136 NWVLHRDLKTSNLLLNNQGV-LKICDFGMS-----RQYGSPLKPYTSLVVTLWYRAPELL 189
+LH D+K N+LL++ G +CDFG + G L + T + APE++
Sbjct: 169 RRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVV 228
Query: 190 LGAKKYSTAVDMWSVGCIMAELL 212
+G K VD+WS C+M +L
Sbjct: 229 MG-KPCDAKVDIWSSCCMMLHML 250
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 98/203 (48%), Gaps = 25/203 (12%)
Query: 18 KISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPS 77
++ G++G V+R DK++G A+KKV++ V R E E+ P
Sbjct: 100 RLGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRAE-------------ELMACAGLTSPR 146
Query: 78 IVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCL--MLQLLEGVKYLHD 135
IV + V + V + ME +E L + +K+ E + L + Q LEG++YLH
Sbjct: 147 IVPLYGAVREG-PWVNIFMELLEGGS--LGQLVKEQGCLPEDRALYYLGQALEGLEYLHS 203
Query: 136 NWVLHRDLKTSNLLLNNQGV-LKICDFGMS-----RQYGSPLKPYTSLVVTLWYRAPELL 189
+LH D+K N+LL++ G +CDFG + G L + T + APE++
Sbjct: 204 RRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVV 263
Query: 190 LGAKKYSTAVDMWSVGCIMAELL 212
LG + VD+WS C+M +L
Sbjct: 264 LG-RSCDAKVDVWSSCCMMLHML 285
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 99/203 (48%), Gaps = 25/203 (12%)
Query: 18 KISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPS 77
++ G++G V+R +DK++G A+KKV++ V R E E+ P
Sbjct: 81 RVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVE-------------ELVACAGLSSPR 127
Query: 78 IVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCL--MLQLLEGVKYLHD 135
IV + V + V + ME +E L + +KQ E + L + Q LEG++YLH
Sbjct: 128 IVPLYGAVREG-PWVNIFMELLEGGS--LGQLIKQMGCLPEDRALYYLGQALEGLEYLHT 184
Query: 136 NWVLHRDLKTSNLLLNNQGV-LKICDFGMS-----RQYGSPLKPYTSLVVTLWYRAPELL 189
+LH D+K N+LL++ G +CDFG + G L + T + APE++
Sbjct: 185 RRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVV 244
Query: 190 LGAKKYSTAVDMWSVGCIMAELL 212
+G K VD+WS C+M +L
Sbjct: 245 MG-KPCDAKVDIWSSCCMMLHML 266
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 98/203 (48%), Gaps = 25/203 (12%)
Query: 18 KISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPS 77
++ G++G V+R DK++G A+KKV++ V R E E+ P
Sbjct: 81 RLGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRAE-------------ELMACAGLTSPR 127
Query: 78 IVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCL--MLQLLEGVKYLHD 135
IV + V + V + ME +E L + +K+ E + L + Q LEG++YLH
Sbjct: 128 IVPLYGAVREG-PWVNIFMELLEGGS--LGQLVKEQGCLPEDRALYYLGQALEGLEYLHS 184
Query: 136 NWVLHRDLKTSNLLLNNQGV-LKICDFGMS-----RQYGSPLKPYTSLVVTLWYRAPELL 189
+LH D+K N+LL++ G +CDFG + G L + T + APE++
Sbjct: 185 RRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVV 244
Query: 190 LGAKKYSTAVDMWSVGCIMAELL 212
LG + VD+WS C+M +L
Sbjct: 245 LG-RSCDAKVDVWSSCCMMLHML 266
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 94/191 (49%), Gaps = 16/191 (8%)
Query: 27 VYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVM 86
VYR R K+ VA+K +K K D E +RE I+ D+P IV + V
Sbjct: 30 VYRMRKKQID--VAIKVLKQGT-EKADTEEM------MREAQIMHQLDNPYIVRLIGVC- 79
Query: 87 DDHDSVYMVMEYMEHD-LKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKT 145
+++ +VME L + ++ S V L+ Q+ G+KYL + +HRDL
Sbjct: 80 -QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAA 138
Query: 146 SNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLW---YRAPELLLGAKKYSTAVDMW 202
N+LL N+ KI DFG+S+ G+ YT+ W + APE + +K+S+ D+W
Sbjct: 139 RNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPE-CINFRKFSSRSDVW 197
Query: 203 SVGCIMAELLA 213
S G M E L+
Sbjct: 198 SYGVTMWEALS 208
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 99/203 (48%), Gaps = 25/203 (12%)
Query: 18 KISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPS 77
++ G++G V+R +DK++G A+KKV++ V R E E+ P
Sbjct: 79 RLGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVE-------------ELVACAGLSSPR 125
Query: 78 IVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCL--MLQLLEGVKYLHD 135
IV + V + V + ME +E L + +KQ E + L + Q LEG++YLH
Sbjct: 126 IVPLYGAVREG-PWVNIFMELLEGGS--LGQLIKQMGCLPEDRALYYLGQALEGLEYLHT 182
Query: 136 NWVLHRDLKTSNLLLNNQGV-LKICDFGMS-----RQYGSPLKPYTSLVVTLWYRAPELL 189
+LH D+K N+LL++ G +CDFG + G L + T + APE++
Sbjct: 183 RRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVV 242
Query: 190 LGAKKYSTAVDMWSVGCIMAELL 212
+G K VD+WS C+M +L
Sbjct: 243 MG-KPCDAKVDIWSSCCMMLHML 264
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 130/308 (42%), Gaps = 60/308 (19%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKV--KMNVGRKEDCLEYGFPISSLREINI 69
E++ I +G + +V R +G A K + K R LE RE I
Sbjct: 5 EYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLE--------REARI 56
Query: 70 LLSFDHPSIVNVKEVVMDDHDSV------YMVMEYMEHDLKWLMESMKQPFSTSEVKCLM 123
H +IV + HDS+ Y+V + + + ++ +S ++ +
Sbjct: 57 CRLLKHSNIVRL-------HDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCI 109
Query: 124 LQLLEGVKYLHDNWVLHRDLKTSNLLLNNQ---GVLKICDFGMSRQYGSPLKPYTSLVVT 180
Q+LE V + H V+HRDLK NLLL ++ +K+ DFG++ + + + T
Sbjct: 110 QQILEAVLHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGT 169
Query: 181 LWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTET 240
Y +PE+L + Y VD+W+ G I+ LL P F + DQ K++ +
Sbjct: 170 PGYLSPEVLR-KEAYGKPVDIWACGVILYILLVGYPPF---WDEDQ-HKLY-------QQ 217
Query: 241 IWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITV 300
I G + P + + ++ +L+N++LT +P KRIT
Sbjct: 218 IKAGAYDFPSPEWD----------------------TVTPEAKNLINQMLTINPAKRITA 255
Query: 301 DDALNHYW 308
+AL H W
Sbjct: 256 HEALKHPW 263
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 103/235 (43%), Gaps = 44/235 (18%)
Query: 8 RSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREI 67
R +F+++ I G +G V++A+ + G+ +++VK N + E RE+
Sbjct: 9 RFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAE------------REV 56
Query: 68 NILLSFDHPSIV----------------------------NVKEVVMDDHDSVYMVMEYM 99
L DH +IV N K +++ ME+
Sbjct: 57 KALAKLDHVNIVHYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFC 116
Query: 100 EHDL--KWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLK 157
+ +W+ + + L Q+ +GV Y+H ++HRDLK SN+ L + +K
Sbjct: 117 DKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVDTKQVK 176
Query: 158 ICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELL 212
I DFG+ + K T TL Y +PE + ++ Y VD++++G I+AELL
Sbjct: 177 IGDFGLVTSLKNDGKR-TRSKGTLRYMSPE-QISSQDYGKEVDLYALGLILAELL 229
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 107/208 (51%), Gaps = 22/208 (10%)
Query: 16 LNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDH 75
L ++ G +G+V + + + VA+K +K +++ +E E ++++ H
Sbjct: 14 LKELGTGQFGVVKYGKWRGQYD-VAIKMIKEGSMSEDEFIE---------EAKVMMNLSH 63
Query: 76 PSIVNVKEVVMDDHDSVYMVMEYMEHD--LKWLMESMKQPFSTSEVKCLMLQLLEGVKYL 133
+V + V ++++ EYM + L +L E M+ F T ++ + + E ++YL
Sbjct: 64 EKLVQLYGVCTKQR-PIFIITEYMANGCLLNYLRE-MRHRFQTQQLLEMCKDVCEAMEYL 121
Query: 134 HDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVT---LWYRAPELLL 190
LHRDL N L+N+QGV+K+ DFG+SR YTS + + + PE+L+
Sbjct: 122 ESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD--EYTSSRGSKFPVRWSPPEVLM 179
Query: 191 GAKKYSTAVDMWSVGCIMAEL--LAKKP 216
+ K+S+ D+W+ G +M E+ L K P
Sbjct: 180 YS-KFSSKSDIWAFGVLMWEIYSLGKMP 206
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 94/191 (49%), Gaps = 16/191 (8%)
Query: 27 VYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVM 86
VYR R K+ VA+K +K K D E +RE I+ D+P IV + V
Sbjct: 356 VYRMRKKQID--VAIKVLKQGT-EKADTEEM------MREAQIMHQLDNPYIVRLIGVC- 405
Query: 87 DDHDSVYMVMEYMEHD-LKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKT 145
+++ +VME L + ++ S V L+ Q+ G+KYL + +HR+L
Sbjct: 406 -QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAA 464
Query: 146 SNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLW---YRAPELLLGAKKYSTAVDMW 202
N+LL N+ KI DFG+S+ G+ YT+ W + APE + +K+S+ D+W
Sbjct: 465 RNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPE-CINFRKFSSRSDVW 523
Query: 203 SVGCIMAELLA 213
S G M E L+
Sbjct: 524 SYGVTMWEALS 534
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 105/206 (50%), Gaps = 18/206 (8%)
Query: 16 LNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDH 75
L ++ G +G+V + + + VA+K +K +++ +E E ++++ H
Sbjct: 29 LKELGTGQFGVVKYGKWRGQYD-VAIKMIKEGSMSEDEFIE---------EAKVMMNLSH 78
Query: 76 PSIVNVKEVVMDDHDSVYMVMEYMEHD--LKWLMESMKQPFSTSEVKCLMLQLLEGVKYL 133
+V + V ++++ EYM + L +L E M+ F T ++ + + E ++YL
Sbjct: 79 EKLVQLYGVCTKQR-PIFIITEYMANGCLLNYLRE-MRHRFQTQQLLEMCKDVCEAMEYL 136
Query: 134 HDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYR-APELLLGA 192
LHRDL N L+N+QGV+K+ DFG+SR Y + +S+ R +P +L
Sbjct: 137 ESKQFLHRDLAARNCLVNDQGVVKVSDFGLSR-YVLDDEETSSVGSKFPVRWSPPEVLMY 195
Query: 193 KKYSTAVDMWSVGCIMAEL--LAKKP 216
K+S+ D+W+ G +M E+ L K P
Sbjct: 196 SKFSSKSDIWAFGVLMWEIYSLGKMP 221
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 111/252 (44%), Gaps = 38/252 (15%)
Query: 6 GCRSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLR 65
R +FE++ + +G +G V +AR+ A+KK++ E+ L + L
Sbjct: 1 SLRYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT----EEKLS-----TILS 51
Query: 66 EINILLSFDHPSIVNVKEVVMDDHD------------SVYMVMEYMEHDLKW-LMESMKQ 112
E+ +L S +H +V ++ + ++++ EY E+ + L+ S
Sbjct: 52 EVXLLASLNHQYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENL 111
Query: 113 PFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPL- 171
E L Q+LE + Y+H ++HR+LK N+ ++ +KI DFG+++ L
Sbjct: 112 NQQRDEYWRLFRQILEALSYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLD 171
Query: 172 -------------KPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLF 218
TS + T Y A E+L G Y+ +D +S+G I E + P
Sbjct: 172 ILKLDSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXIY--PFS 229
Query: 219 SGTTEVDQIDKI 230
+G V+ + K+
Sbjct: 230 TGXERVNILKKL 241
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 117/284 (41%), Gaps = 49/284 (17%)
Query: 17 NKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHP 76
+K+ G YG VY KK VA+K +K ED +E L+E ++ HP
Sbjct: 17 HKLGGGQYGEVYEGVWKKYSLTVAVKTLK------EDTMEVE---EFLKEAAVMKEIKHP 67
Query: 77 SIVNVKEVVMDDHDSVYMVMEYMEHD--LKWLMESMKQPFSTSEVKCLMLQLLEGVKYLH 134
++V + V + Y+++E+M + L +L E +Q S + + Q+ ++YL
Sbjct: 68 NLVQLLGVCTRE-PPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE 126
Query: 135 DNWVLHRDLKTSNLLLNNQGVLKICDFGMSR-QYGSPLKPYTSLVVTLWYRAPELLLGAK 193
+HRDL N L+ ++K+ DFG+SR G + + + APE L
Sbjct: 127 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPE-SLAYN 185
Query: 194 KYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGAKA 253
K+S D+W+ G ++ E+ G+S PG
Sbjct: 186 KFSIKSDVWAFGVLLWEIATY-----------------------------GMSPYPGIDP 216
Query: 254 NFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKR 297
+ Q Y LL K + G P E ++L+ ++P R
Sbjct: 217 S---QVYELLEKDYRMERPEGCP---EKVYELMRACWQWNPSDR 254
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 105/214 (49%), Gaps = 26/214 (12%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILL 71
E E + G +G+V +A K + VA+K+++ RK + + E+ L
Sbjct: 9 EIEVEEVVGRGAFGVVCKA--KWRAKDVAIKQIESESERK----------AFIVELRQLS 56
Query: 72 SFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQP---FSTSEVKCLMLQLLE 128
+HP+IV + ++ V +VMEY E + + +P ++ + LQ +
Sbjct: 57 RVNHPNIVKLYGACLN---PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQ 113
Query: 129 GVKYLHD---NWVLHRDLKTSNLLLNNQG-VLKICDFGMSRQYGSPLKPYTSLVVTLWYR 184
GV YLH ++HRDLK NLLL G VLKICDFG + + + T+ + +
Sbjct: 114 GVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHM---TNNKGSAAWM 170
Query: 185 APELLLGAKKYSTAVDMWSVGCIMAELLAKKPLF 218
APE+ G+ YS D++S G I+ E++ ++ F
Sbjct: 171 APEVFEGS-NYSEKCDVFSWGIILWEVITRRKPF 203
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 116/284 (40%), Gaps = 49/284 (17%)
Query: 17 NKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHP 76
+K+ G YG VY KK VA+K +K ED +E L+E ++ HP
Sbjct: 17 HKLGGGQYGEVYEGVWKKYSLTVAVKTLK------EDTMEVE---EFLKEAAVMKEIKHP 67
Query: 77 SIVNVKEVVMDDHDSVYMVMEYMEHD--LKWLMESMKQPFSTSEVKCLMLQLLEGVKYLH 134
++V + V + Y++ E+M + L +L E +Q S + + Q+ ++YL
Sbjct: 68 NLVQLLGVCTRE-PPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE 126
Query: 135 DNWVLHRDLKTSNLLLNNQGVLKICDFGMSR-QYGSPLKPYTSLVVTLWYRAPELLLGAK 193
+HRDL N L+ ++K+ DFG+SR G + + + APE L
Sbjct: 127 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTAPE-SLAYN 185
Query: 194 KYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGAKA 253
K+S D+W+ G ++ E+ G+S PG
Sbjct: 186 KFSIKSDVWAFGVLLWEIATY-----------------------------GMSPYPGIDP 216
Query: 254 NFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKR 297
+ Q Y LL K + G P E ++L+ ++P R
Sbjct: 217 S---QVYELLEKDYRMERPEGCP---EKVYELMRACWQWNPSDR 254
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 117/284 (41%), Gaps = 49/284 (17%)
Query: 17 NKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHP 76
+K+ G YG VY KK VA+K +K ED +E L+E ++ HP
Sbjct: 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLK------EDTMEVE---EFLKEAAVMKEIKHP 69
Query: 77 SIVNVKEVVMDDHDSVYMVMEYMEHD--LKWLMESMKQPFSTSEVKCLMLQLLEGVKYLH 134
++V + V + Y+++E+M + L +L E +Q S + + Q+ ++YL
Sbjct: 70 NLVQLLGVCTRE-PPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE 128
Query: 135 DNWVLHRDLKTSNLLLNNQGVLKICDFGMSR-QYGSPLKPYTSLVVTLWYRAPELLLGAK 193
+HRDL N L+ ++K+ DFG+SR G + + + APE L
Sbjct: 129 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE-SLAYN 187
Query: 194 KYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGAKA 253
K+S D+W+ G ++ E+ G+S PG
Sbjct: 188 KFSIKSDVWAFGVLLWEIATY-----------------------------GMSPYPGIDL 218
Query: 254 NFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKR 297
+ Q Y LL K + G P E ++L+ ++P R
Sbjct: 219 S---QVYELLEKDYRMERPEGCP---EKVYELMRACWQWNPSDR 256
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 105/214 (49%), Gaps = 26/214 (12%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILL 71
E E + G +G+V +A K + VA+K+++ RK + + E+ L
Sbjct: 10 EIEVEEVVGRGAFGVVCKA--KWRAKDVAIKQIESESERK----------AFIVELRQLS 57
Query: 72 SFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQP---FSTSEVKCLMLQLLE 128
+HP+IV + ++ V +VMEY E + + +P ++ + LQ +
Sbjct: 58 RVNHPNIVKLYGACLN---PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQ 114
Query: 129 GVKYLHD---NWVLHRDLKTSNLLLNNQG-VLKICDFGMSRQYGSPLKPYTSLVVTLWYR 184
GV YLH ++HRDLK NLLL G VLKICDFG + + + T+ + +
Sbjct: 115 GVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHM---TNNKGSAAWM 171
Query: 185 APELLLGAKKYSTAVDMWSVGCIMAELLAKKPLF 218
APE+ G+ YS D++S G I+ E++ ++ F
Sbjct: 172 APEVFEGS-NYSEKCDVFSWGIILWEVITRRKPF 204
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 117/284 (41%), Gaps = 49/284 (17%)
Query: 17 NKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHP 76
+K+ G YG VY KK VA+K +K ED +E L+E ++ HP
Sbjct: 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLK------EDTMEVE---EFLKEAAVMKEIKHP 69
Query: 77 SIVNVKEVVMDDHDSVYMVMEYMEHD--LKWLMESMKQPFSTSEVKCLMLQLLEGVKYLH 134
++V + V + Y+++E+M + L +L E +Q S + + Q+ ++YL
Sbjct: 70 NLVQLLGVCTRE-PPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE 128
Query: 135 DNWVLHRDLKTSNLLLNNQGVLKICDFGMSR-QYGSPLKPYTSLVVTLWYRAPELLLGAK 193
+HRDL N L+ ++K+ DFG+SR G + + + APE L
Sbjct: 129 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE-SLAYN 187
Query: 194 KYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGAKA 253
K+S D+W+ G ++ E+ G+S PG
Sbjct: 188 KFSIKSDVWAFGVLLWEIATY-----------------------------GMSPYPGIDL 218
Query: 254 NFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKR 297
+ Q Y LL K + G P E ++L+ ++P R
Sbjct: 219 S---QVYELLEKDYRMERPEGCP---EKVYELMRACWQWNPSDR 256
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 109/221 (49%), Gaps = 30/221 (13%)
Query: 16 LNKISEGTYGIVYR--ARDKKSGEI---VALKKVKMNVGRKEDCLEYGFPISSLREINIL 70
L ++ +G++G+VY ARD GE VA+K V + +E I L E +++
Sbjct: 22 LRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRER-------IEFLNEASVM 74
Query: 71 LSFDHPSIVNVKEVVMDDHDSVYMVMEYMEH-DLKWLMESMKQ---------PFSTSEVK 120
F +V + VV ++ +VME M H DLK + S++ P + E+
Sbjct: 75 KGFTCHHVVRLLGVVSKGQPTL-VVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMI 133
Query: 121 CLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSR---QYGSPLKPYTSL 177
+ ++ +G+ YL+ +HRDL N ++ + +KI DFGM+R + K L
Sbjct: 134 QMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGL 193
Query: 178 VVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAEL--LAKKP 216
+ W APE L ++T+ DMWS G ++ E+ LA++P
Sbjct: 194 LPVRWM-APESLKDG-VFTTSSDMWSFGVVLWEITSLAEQP 232
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 143/329 (43%), Gaps = 57/329 (17%)
Query: 8 RSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREI 67
R +E +++ I G +V A E VA+K++ + E C + L+EI
Sbjct: 14 RDDYELQEV--IGSGATAVVQAAYCAPKKEKVAIKRINL-----EKCQTSMDEL--LKEI 64
Query: 68 NILLSFDHPSIVN--VKEVVMDDHDSVYMVMEYMEHD-----LKWLM---ESMKQPFSTS 117
+ HP+IV+ VV D+ +++VM+ + +K ++ E S
Sbjct: 65 QAMSQCHHPNIVSYYTSFVVKDE---LWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDES 121
Query: 118 EVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSR--QYGSPL---K 172
+ ++ ++LEG++YLH N +HRD+K N+LL G ++I DFG+S G + K
Sbjct: 122 TIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNK 181
Query: 173 PYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFK 232
+ V T + APE++ + Y D+WS G EL + + + +
Sbjct: 182 VRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYH---KYPPMKVLML 238
Query: 233 TLGTPTETIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTY 292
TL ++ G+ Q +L+K +S +++ L
Sbjct: 239 TLQNDPPSLETGV------------QDKEMLKK------------YGKSFRKMISLCLQK 274
Query: 293 DPEKRITVDDALNHYWFHEVPLPKSKDFM 321
DPEKR T + L H +F + K+K+F+
Sbjct: 275 DPEKRPTAAELLRHKFFQKA---KNKEFL 300
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 116/284 (40%), Gaps = 49/284 (17%)
Query: 17 NKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHP 76
+K+ G YG VY KK VA+K +K ED +E L+E ++ HP
Sbjct: 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLK------EDTMEVE---EFLKEAAVMKEIKHP 69
Query: 77 SIVNVKEVVMDDHDSVYMVMEYMEHD--LKWLMESMKQPFSTSEVKCLMLQLLEGVKYLH 134
++V + V + Y++ E+M + L +L E +Q S + + Q+ ++YL
Sbjct: 70 NLVQLLGVCTRE-PPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE 128
Query: 135 DNWVLHRDLKTSNLLLNNQGVLKICDFGMSR-QYGSPLKPYTSLVVTLWYRAPELLLGAK 193
+HRDL N L+ ++K+ DFG+SR G + + + APE L
Sbjct: 129 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE-SLAYN 187
Query: 194 KYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGAKA 253
K+S D+W+ G ++ E+ G+S PG
Sbjct: 188 KFSIKSDVWAFGVLLWEIATY-----------------------------GMSPYPGIDL 218
Query: 254 NFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKR 297
+ Q Y LL K + G P E ++L+ ++P R
Sbjct: 219 S---QVYELLEKDYRMERPEGCP---EKVYELMRACWQWNPSDR 256
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 109/221 (49%), Gaps = 30/221 (13%)
Query: 16 LNKISEGTYGIVYR--ARDKKSGEI---VALKKVKMNVGRKEDCLEYGFPISSLREINIL 70
L ++ +G++G+VY ARD GE VA+K V + +E I L E +++
Sbjct: 19 LRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRER-------IEFLNEASVM 71
Query: 71 LSFDHPSIVNVKEVVMDDHDSVYMVMEYMEH-DLKWLMESMKQ---------PFSTSEVK 120
F +V + VV ++ +VME M H DLK + S++ P + E+
Sbjct: 72 KGFTCHHVVRLLGVVSKGQPTL-VVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMI 130
Query: 121 CLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSR---QYGSPLKPYTSL 177
+ ++ +G+ YL+ +HRDL N ++ + +KI DFGM+R + K L
Sbjct: 131 QMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGL 190
Query: 178 VVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAEL--LAKKP 216
+ W APE L ++T+ DMWS G ++ E+ LA++P
Sbjct: 191 LPVRWM-APESLKDG-VFTTSSDMWSFGVVLWEITSLAEQP 229
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 109/221 (49%), Gaps = 30/221 (13%)
Query: 16 LNKISEGTYGIVYR--ARDKKSGEI---VALKKVKMNVGRKEDCLEYGFPISSLREINIL 70
L ++ +G++G+VY ARD GE VA+K V + +E I L E +++
Sbjct: 22 LRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRER-------IEFLNEASVM 74
Query: 71 LSFDHPSIVNVKEVVMDDHDSVYMVMEYMEH-DLKWLMESMKQ---------PFSTSEVK 120
F +V + VV ++ +VME M H DLK + S++ P + E+
Sbjct: 75 KGFTCHHVVRLLGVVSKGQPTL-VVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMI 133
Query: 121 CLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSR---QYGSPLKPYTSL 177
+ ++ +G+ YL+ +HRDL N ++ + +KI DFGM+R + K L
Sbjct: 134 QMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGL 193
Query: 178 VVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAEL--LAKKP 216
+ W APE L ++T+ DMWS G ++ E+ LA++P
Sbjct: 194 LPVRWM-APESLKDG-VFTTSSDMWSFGVVLWEITSLAEQP 232
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 93/198 (46%), Gaps = 14/198 (7%)
Query: 17 NKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHP 76
+K+ G YG VY KK VA+K +K ED +E L+E ++ HP
Sbjct: 24 HKLGGGQYGEVYEGVWKKYSLTVAVKTLK------EDTMEVE---EFLKEAAVMKEIKHP 74
Query: 77 SIVNVKEVVMDDHDSVYMVMEYMEHD--LKWLMESMKQPFSTSEVKCLMLQLLEGVKYLH 134
++V + V + Y++ E+M + L +L E +Q S + + Q+ ++YL
Sbjct: 75 NLVQLLGVCTRE-PPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE 133
Query: 135 DNWVLHRDLKTSNLLLNNQGVLKICDFGMSR-QYGSPLKPYTSLVVTLWYRAPELLLGAK 193
+HRDL N L+ ++K+ DFG+SR G + + + APE L
Sbjct: 134 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE-SLAYN 192
Query: 194 KYSTAVDMWSVGCIMAEL 211
K+S D+W+ G ++ E+
Sbjct: 193 KFSIKSDVWAFGVLLWEI 210
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 93/198 (46%), Gaps = 14/198 (7%)
Query: 17 NKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHP 76
+K+ G YG VY KK VA+K +K ED +E L+E ++ HP
Sbjct: 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLK------EDTMEVE---EFLKEAAVMKEIKHP 69
Query: 77 SIVNVKEVVMDDHDSVYMVMEYMEHD--LKWLMESMKQPFSTSEVKCLMLQLLEGVKYLH 134
++V + V + Y++ E+M + L +L E +Q S + + Q+ ++YL
Sbjct: 70 NLVQLLGVCTRE-PPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE 128
Query: 135 DNWVLHRDLKTSNLLLNNQGVLKICDFGMSR-QYGSPLKPYTSLVVTLWYRAPELLLGAK 193
+HRDL N L+ ++K+ DFG+SR G + + + APE L
Sbjct: 129 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE-SLAYN 187
Query: 194 KYSTAVDMWSVGCIMAEL 211
K+S D+W+ G ++ E+
Sbjct: 188 KFSIKSDVWAFGVLLWEI 205
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 117/284 (41%), Gaps = 49/284 (17%)
Query: 17 NKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHP 76
+K+ G YG VY KK VA+K +K ED +E L+E ++ HP
Sbjct: 24 HKLGGGQYGEVYEGVWKKYSLTVAVKTLK------EDTMEVE---EFLKEAAVMKEIKHP 74
Query: 77 SIVNVKEVVMDDHDSVYMVMEYMEHD--LKWLMESMKQPFSTSEVKCLMLQLLEGVKYLH 134
++V + V + Y+++E+M + L +L E +Q + + + Q+ ++YL
Sbjct: 75 NLVQLLGVCTRE-PPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 133
Query: 135 DNWVLHRDLKTSNLLLNNQGVLKICDFGMSR-QYGSPLKPYTSLVVTLWYRAPELLLGAK 193
+HRDL N L+ ++K+ DFG+SR G + + + APE L
Sbjct: 134 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE-SLAYN 192
Query: 194 KYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGAKA 253
K+S D+W+ G ++ E+ G+S PG
Sbjct: 193 KFSIKSDVWAFGVLLWEIATY-----------------------------GMSPYPGIDL 223
Query: 254 NFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKR 297
+ Q Y LL K + G P E ++L+ ++P R
Sbjct: 224 S---QVYELLEKDYRMERPEGCP---EKVYELMRACWQWNPSDR 261
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 102/205 (49%), Gaps = 14/205 (6%)
Query: 17 NKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHP 76
NK+ EG +G+VY+ + VA+KK+ V + L+ F +EI ++ H
Sbjct: 37 NKMGEGGFGVVYKGYVNNT--TVAVKKLAAMVDITTEELKQQFD----QEIKVMAKCQHE 90
Query: 77 SIVNVKEVVMDDHDSVYMVMEYMEHD--LKWLMESMKQPFSTSEVKCLMLQ-LLEGVKYL 133
++V + D D + +V YM + L L P + ++C + Q G+ +L
Sbjct: 91 NLVELLGF-SSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFL 149
Query: 134 HDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPY--TSLVVTLWYRAPELLLG 191
H+N +HRD+K++N+LL+ KI DFG++R + + +V T Y APE L G
Sbjct: 150 HENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPEALRG 209
Query: 192 AKKYSTAVDMWSVGCIMAELLAKKP 216
+ + D++S G ++ E++ P
Sbjct: 210 --EITPKSDIYSFGVVLLEIITGLP 232
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 109/221 (49%), Gaps = 30/221 (13%)
Query: 16 LNKISEGTYGIVYR--ARDKKSGEI---VALKKVKMNVGRKEDCLEYGFPISSLREINIL 70
L ++ +G++G+VY ARD GE VA+K V + +E I L E +++
Sbjct: 22 LRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRER-------IEFLNEASVM 74
Query: 71 LSFDHPSIVNVKEVVMDDHDSVYMVMEYMEH-DLKWLMESMKQ---------PFSTSEVK 120
F +V + VV ++ +VME M H DLK + S++ P + E+
Sbjct: 75 KGFTCHHVVRLLGVVSKGQPTL-VVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMI 133
Query: 121 CLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSR---QYGSPLKPYTSL 177
+ ++ +G+ YL+ +HRDL N ++ + +KI DFGM+R + K L
Sbjct: 134 QMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGL 193
Query: 178 VVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAEL--LAKKP 216
+ W APE L ++T+ DMWS G ++ E+ LA++P
Sbjct: 194 LPVRWM-APESLKDG-VFTTSSDMWSFGVVLWEITSLAEQP 232
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 100/229 (43%), Gaps = 34/229 (14%)
Query: 13 FEKLNKISEGTYGIVYRARDKK--SGEIVALKKVKMNVGRKEDCLEYGFPISSLREINIL 70
E + I EG +G V++AR E + VKM ++ F RE ++
Sbjct: 49 IEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQ----REAALM 104
Query: 71 LSFDHPSIVNVKEVVMDDHDSVYMVMEYMEH-DLKWLMESMKQ----------------- 112
FD+P+IV + V + ++ EYM + DL + SM
Sbjct: 105 AEFDNPNIVKLLGVCAVGK-PMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARV 163
Query: 113 ------PFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQ 166
P S +E C+ Q+ G+ YL + +HRDL T N L+ V+KI DFG+SR
Sbjct: 164 SSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRN 223
Query: 167 YGSP--LKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA 213
S K + + + + PE + +Y+T D+W+ G ++ E+ +
Sbjct: 224 IYSADYYKADGNDAIPIRWMPPESIF-YNRYTTESDVWAYGVVLWEIFS 271
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 94/198 (47%), Gaps = 14/198 (7%)
Query: 17 NKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHP 76
+K+ G YG VY KK VA+K +K ED +E L+E ++ HP
Sbjct: 20 HKLGGGQYGEVYEGVWKKYSLTVAVKTLK------EDTMEVE---EFLKEAAVMKEIKHP 70
Query: 77 SIVNVKEVVMDDHDSVYMVMEYMEHD--LKWLMESMKQPFSTSEVKCLMLQLLEGVKYLH 134
++V + V + Y+++E+M + L +L E +Q + + + Q+ ++YL
Sbjct: 71 NLVQLLGVCTRE-PPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 129
Query: 135 DNWVLHRDLKTSNLLLNNQGVLKICDFGMSR-QYGSPLKPYTSLVVTLWYRAPELLLGAK 193
+HRDL N L+ ++K+ DFG+SR G + + + APE L
Sbjct: 130 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPE-SLAYN 188
Query: 194 KYSTAVDMWSVGCIMAEL 211
K+S D+W+ G ++ E+
Sbjct: 189 KFSIKSDVWAFGVLLWEI 206
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 103/229 (44%), Gaps = 38/229 (16%)
Query: 4 LQGCRSVFE-----FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYG 58
QG FE E + ++ G YG+V + R SG+I A+K+++ V +E
Sbjct: 22 FQGAXENFEVKADDLEPIXELGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQ----- 76
Query: 59 FPISSLREINI-LLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESM---KQPF 114
L +++I + D P V + + D V++ E + L + + Q
Sbjct: 77 --KRLLXDLDISXRTVDCPFTVTFYGALFREGD-VWICXELXDTSLDKFYKQVIDKGQTI 133
Query: 115 STSEVKCLMLQLLEGVKYLHDNW-VLHRDLKTSNLLLNNQGVLKICDFGMS--------R 165
+ + + +++ +++LH V+HRD+K SN+L+N G +K CDFG+S +
Sbjct: 134 PEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAK 193
Query: 166 QYGSPLKPYTSLVVTLWYRAPELL---LGAKKYSTAVDMWSVGCIMAEL 211
+ KPY APE + L K YS D+WS+G EL
Sbjct: 194 DIDAGCKPYX---------APERINPELNQKGYSVKSDIWSLGITXIEL 233
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 104/219 (47%), Gaps = 27/219 (12%)
Query: 8 RSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREI 67
R +E +++ I G +V A E VA+K++ + E C + L+EI
Sbjct: 9 RDDYELQEV--IGSGATAVVQAAYCAPKKEKVAIKRINL-----EKCQTSMDEL--LKEI 59
Query: 68 NILLSFDHPSIVN--VKEVVMDDHDSVYMVMEYMEHD-----LKWLM---ESMKQPFSTS 117
+ HP+IV+ VV D+ +++VM+ + +K ++ E S
Sbjct: 60 QAMSQCHHPNIVSYYTSFVVKDE---LWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDES 116
Query: 118 EVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSR--QYGSPL---K 172
+ ++ ++LEG++YLH N +HRD+K N+LL G ++I DFG+S G + K
Sbjct: 117 TIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNK 176
Query: 173 PYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAEL 211
+ V T + APE++ + Y D+WS G EL
Sbjct: 177 VRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIEL 215
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 116/284 (40%), Gaps = 49/284 (17%)
Query: 17 NKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHP 76
+K+ G YG VY KK VA+K +K ED +E L+E ++ HP
Sbjct: 24 HKLGGGQYGEVYEGVWKKYSLTVAVKTLK------EDTMEVE---EFLKEAAVMKEIKHP 74
Query: 77 SIVNVKEVVMDDHDSVYMVMEYMEHD--LKWLMESMKQPFSTSEVKCLMLQLLEGVKYLH 134
++V + V + Y++ E+M + L +L E +Q + + + Q+ ++YL
Sbjct: 75 NLVQLLGVCTRE-PPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 133
Query: 135 DNWVLHRDLKTSNLLLNNQGVLKICDFGMSR-QYGSPLKPYTSLVVTLWYRAPELLLGAK 193
+HRDL N L+ ++K+ DFG+SR G + + + APE L
Sbjct: 134 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPE-SLAYN 192
Query: 194 KYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGAKA 253
K+S D+W+ G ++ E+ G+S PG
Sbjct: 193 KFSIKSDVWAFGVLLWEIATY-----------------------------GMSPYPGIDL 223
Query: 254 NFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKR 297
+ Q Y LL K + G P E ++L+ ++P R
Sbjct: 224 S---QVYELLEKDYRMERPEGCP---EKVYELMRACWQWNPSDR 261
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 116/284 (40%), Gaps = 49/284 (17%)
Query: 17 NKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHP 76
+K+ G YG VY KK VA+K +K ED +E L+E ++ HP
Sbjct: 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLK------EDTMEVE---EFLKEAAVMKEIKHP 69
Query: 77 SIVNVKEVVMDDHDSVYMVMEYMEHD--LKWLMESMKQPFSTSEVKCLMLQLLEGVKYLH 134
++V + V + Y++ E+M + L +L E +Q + + + Q+ ++YL
Sbjct: 70 NLVQLLGVCTRE-PPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 128
Query: 135 DNWVLHRDLKTSNLLLNNQGVLKICDFGMSR-QYGSPLKPYTSLVVTLWYRAPELLLGAK 193
+HRDL N L+ ++K+ DFG+SR G + + + APE L
Sbjct: 129 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE-SLAYN 187
Query: 194 KYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGAKA 253
K+S D+W+ G ++ E+ G+S PG
Sbjct: 188 KFSIKSDVWAFGVLLWEIATY-----------------------------GMSPYPGIDL 218
Query: 254 NFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKR 297
+ Q Y LL K + G P E ++L+ ++P R
Sbjct: 219 S---QVYELLEKDYRMERPEGCP---EKVYELMRACWQWNPSDR 256
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 110/221 (49%), Gaps = 30/221 (13%)
Query: 16 LNKISEGTYGIVYR--ARDKKSGEI---VALKKVKMNVGRKEDCLEYGFPISSLREINIL 70
L ++ +G++G+VY ARD GE VA+K V + +E I L E +++
Sbjct: 21 LRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRER-------IEFLNEASVM 73
Query: 71 LSFDHPSIVNVKEVVMDDHDSVYMVMEYMEH-DLKWLMESMKQ---------PFSTSEVK 120
F +V + VV ++ +VME M H DLK + S++ P + E+
Sbjct: 74 KGFTCHHVVRLLGVVSKGQPTL-VVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMI 132
Query: 121 CLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQ-YGSPL--KPYTSL 177
+ ++ +G+ YL+ +HRDL N ++ + +KI DFGM+R Y + K L
Sbjct: 133 QMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGL 192
Query: 178 VVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAEL--LAKKP 216
+ W APE L ++T+ DMWS G ++ E+ LA++P
Sbjct: 193 LPVRWM-APESLKDG-VFTTSSDMWSFGVVLWEITSLAEQP 231
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 116/284 (40%), Gaps = 49/284 (17%)
Query: 17 NKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHP 76
+K+ G YG VY KK VA+K +K ED +E L+E ++ HP
Sbjct: 23 HKLGGGQYGEVYEGVWKKYSLTVAVKTLK------EDTMEVE---EFLKEAAVMKEIKHP 73
Query: 77 SIVNVKEVVMDDHDSVYMVMEYMEHD--LKWLMESMKQPFSTSEVKCLMLQLLEGVKYLH 134
++V + V + Y++ E+M + L +L E +Q + + + Q+ ++YL
Sbjct: 74 NLVQLLGVCTRE-PPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 132
Query: 135 DNWVLHRDLKTSNLLLNNQGVLKICDFGMSR-QYGSPLKPYTSLVVTLWYRAPELLLGAK 193
+HRDL N L+ ++K+ DFG+SR G + + + APE L
Sbjct: 133 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE-SLAYN 191
Query: 194 KYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGAKA 253
K+S D+W+ G ++ E+ G+S PG
Sbjct: 192 KFSIKSDVWAFGVLLWEIATY-----------------------------GMSPYPGIDL 222
Query: 254 NFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKR 297
+ Q Y LL K + G P E ++L+ ++P R
Sbjct: 223 S---QVYELLEKDYRMERPEGCP---EKVYELMRACWQWNPSDR 260
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 110/221 (49%), Gaps = 30/221 (13%)
Query: 16 LNKISEGTYGIVYR--ARDKKSGEI---VALKKVKMNVGRKEDCLEYGFPISSLREINIL 70
L ++ +G++G+VY ARD GE VA+K V + +E I L E +++
Sbjct: 22 LRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRER-------IEFLNEASVM 74
Query: 71 LSFDHPSIVNVKEVVMDDHDSVYMVMEYMEH-DLKWLMESMKQ---------PFSTSEVK 120
F +V + VV ++ +VME M H DLK + S++ P + E+
Sbjct: 75 KGFTCHHVVRLLGVVSKGQPTL-VVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMI 133
Query: 121 CLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQ-YGSPL--KPYTSL 177
+ ++ +G+ YL+ +HRDL N ++ + +KI DFGM+R Y + K L
Sbjct: 134 QMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGL 193
Query: 178 VVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAEL--LAKKP 216
+ W APE L ++T+ DMWS G ++ E+ LA++P
Sbjct: 194 LPVRWM-APESLKDG-VFTTSSDMWSFGVVLWEITSLAEQP 232
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 116/284 (40%), Gaps = 49/284 (17%)
Query: 17 NKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHP 76
+K+ G YG VY KK VA+K +K ED +E L+E ++ HP
Sbjct: 24 HKLGGGQYGEVYEGVWKKYSLTVAVKTLK------EDTMEVE---EFLKEAAVMKEIKHP 74
Query: 77 SIVNVKEVVMDDHDSVYMVMEYMEHD--LKWLMESMKQPFSTSEVKCLMLQLLEGVKYLH 134
++V + V + Y++ E+M + L +L E +Q + + + Q+ ++YL
Sbjct: 75 NLVQLLGVCTRE-PPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 133
Query: 135 DNWVLHRDLKTSNLLLNNQGVLKICDFGMSR-QYGSPLKPYTSLVVTLWYRAPELLLGAK 193
+HRDL N L+ ++K+ DFG+SR G + + + APE L
Sbjct: 134 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE-SLAYN 192
Query: 194 KYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGAKA 253
K+S D+W+ G ++ E+ G+S PG
Sbjct: 193 KFSIKSDVWAFGVLLWEIATY-----------------------------GMSPYPGIDL 223
Query: 254 NFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKR 297
+ Q Y LL K + G P E ++L+ ++P R
Sbjct: 224 S---QVYELLEKDYRMERPEGCP---EKVYELMRACWQWNPSDR 261
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 128/297 (43%), Gaps = 49/297 (16%)
Query: 18 KISEGTYGIVYRARDKKSGEIVALKKV--KMNVGRKEDCLEYGFPISSLREINILLSFDH 75
++ +G + +V R K +G A K + K R LE RE I H
Sbjct: 13 ELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLE--------REARICRKLQH 64
Query: 76 PSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHD 135
P+IV + + + ++ Y+V + + + ++ +S ++ + Q+LE + Y H
Sbjct: 65 PNIVRLHDSIQEESFH-YLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHS 123
Query: 136 NWVLHRDLKTSNLLLNNQ---GVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGA 192
N ++HR+LK NLLL ++ +K+ DFG++ + + + T Y +PE +L
Sbjct: 124 NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS-EAWHGFAGTPGYLSPE-VLKK 181
Query: 193 KKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGAK 252
YS VD+W+ G I+ LL P F + DQ +++ + G + P +
Sbjct: 182 DPYSKPVDIWACGVILYILLVGYPPF---WDEDQ-HRLYAQIKA-------GAYDYPSPE 230
Query: 253 ANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWF 309
+ ++ L++ +LT +P+KRIT D AL W
Sbjct: 231 WD----------------------TVTPEAKSLIDSMLTVNPKKRITADQALKVPWI 265
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 116/284 (40%), Gaps = 49/284 (17%)
Query: 17 NKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHP 76
+K+ G YG VY KK VA+K +K ED +E L+E ++ HP
Sbjct: 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLK------EDTMEVE---EFLKEAAVMKEIKHP 69
Query: 77 SIVNVKEVVMDDHDSVYMVMEYMEHD--LKWLMESMKQPFSTSEVKCLMLQLLEGVKYLH 134
++V + V + Y++ E+M + L +L E +Q + + + Q+ ++YL
Sbjct: 70 NLVQLLGVCTRE-PPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 128
Query: 135 DNWVLHRDLKTSNLLLNNQGVLKICDFGMSR-QYGSPLKPYTSLVVTLWYRAPELLLGAK 193
+HRDL N L+ ++K+ DFG+SR G + + + APE L
Sbjct: 129 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE-SLAYN 187
Query: 194 KYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGAKA 253
K+S D+W+ G ++ E+ G+S PG
Sbjct: 188 KFSIKSDVWAFGVLLWEIATY-----------------------------GMSPYPGIDL 218
Query: 254 NFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKR 297
+ Q Y LL K + G P E ++L+ ++P R
Sbjct: 219 S---QVYELLEKDYRMERPEGCP---EKVYELMRACWQWNPSDR 256
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 96/202 (47%), Gaps = 18/202 (8%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILL 71
E + L I +G +G V + G VA+K +K D F L E +++
Sbjct: 194 ELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIK------NDATAQAF----LAEASVMT 241
Query: 72 SFDHPSIVNVKEVVMDDHDSVYMVMEYMEHD--LKWLMESMKQPFSTSEVKCLMLQLLEG 129
H ++V + V++++ +Y+V EYM + +L + + L + E
Sbjct: 242 QLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEA 301
Query: 130 VKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELL 189
++YL N +HRDL N+L++ V K+ DFG++++ S T + W APE L
Sbjct: 302 MEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD--TGKLPVKW-TAPEAL 358
Query: 190 LGAKKYSTAVDMWSVGCIMAEL 211
KK+ST D+WS G ++ E+
Sbjct: 359 R-EKKFSTKSDVWSFGILLWEI 379
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 101/205 (49%), Gaps = 14/205 (6%)
Query: 17 NKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHP 76
NK+ EG +G+VY+ + VA+KK+ V + L+ F +EI ++ H
Sbjct: 37 NKMGEGGFGVVYKGYVNNT--TVAVKKLAAMVDITTEELKQQFD----QEIKVMAKCQHE 90
Query: 77 SIVNVKEVVMDDHDSVYMVMEYMEHD--LKWLMESMKQPFSTSEVKCLMLQ-LLEGVKYL 133
++V + D D + +V YM + L L P + ++C + Q G+ +L
Sbjct: 91 NLVELLGF-SSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFL 149
Query: 134 HDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPY--TSLVVTLWYRAPELLLG 191
H+N +HRD+K++N+LL+ KI DFG++R + +V T Y APE L G
Sbjct: 150 HENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPEALRG 209
Query: 192 AKKYSTAVDMWSVGCIMAELLAKKP 216
+ + D++S G ++ E++ P
Sbjct: 210 --EITPKSDIYSFGVVLLEIITGLP 232
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 131/300 (43%), Gaps = 55/300 (18%)
Query: 18 KISEGTYGIVYRARDKKSG-----EIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
++ +G + +V R K +G +I+ KK+ +K LE RE I
Sbjct: 12 ELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQK---LE--------REARICRK 60
Query: 73 FDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKY 132
HP+IV + + + ++ Y+V + + + ++ +S ++ + Q+LE + Y
Sbjct: 61 LQHPNIVRLHDSIQEESFH-YLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAY 119
Query: 133 LHDNWVLHRDLKTSNLLLNNQ---GVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELL 189
H N ++HR+LK NLLL ++ +K+ DFG++ + + + T Y +PE +
Sbjct: 120 CHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS-EAWHGFAGTPGYLSPE-V 177
Query: 190 LGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELP 249
L YS VD+W+ G I+ LL P F + DQ +++ + G + P
Sbjct: 178 LKKDPYSKPVDIWACGVILYILLVGYPPF---WDEDQ-HRLYAQIKA-------GAYDYP 226
Query: 250 GAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWF 309
+ + ++ L++ +LT +P+KRIT D AL W
Sbjct: 227 SPEWD----------------------TVTPEAKSLIDSMLTVNPKKRITADQALKVPWI 264
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 102/205 (49%), Gaps = 14/205 (6%)
Query: 17 NKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHP 76
NK+ EG +G+VY+ + VA+KK+ V + L+ F +EI ++ H
Sbjct: 31 NKMGEGGFGVVYKGYVNNT--TVAVKKLAAMVDITTEELKQQFD----QEIKVMAKCQHE 84
Query: 77 SIVNVKEVVMDDHDSVYMVMEYMEHD--LKWLMESMKQPFSTSEVKCLMLQ-LLEGVKYL 133
++V + D D + +V YM + L L P + ++C + Q G+ +L
Sbjct: 85 NLVELLGF-SSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFL 143
Query: 134 HDNWVLHRDLKTSNLLLNNQGVLKICDFGMSR--QYGSPLKPYTSLVVTLWYRAPELLLG 191
H+N +HRD+K++N+LL+ KI DFG++R + + +V T Y APE L G
Sbjct: 144 HENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPEALRG 203
Query: 192 AKKYSTAVDMWSVGCIMAELLAKKP 216
+ + D++S G ++ E++ P
Sbjct: 204 --EITPKSDIYSFGVVLLEIITGLP 226
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 116/284 (40%), Gaps = 49/284 (17%)
Query: 17 NKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHP 76
+K+ G +G VY KK VA+K +K ED +E L+E ++ HP
Sbjct: 17 HKLGGGQFGEVYEGVWKKYSLTVAVKTLK------EDTMEVE---EFLKEAAVMKEIKHP 67
Query: 77 SIVNVKEVVMDDHDSVYMVMEYMEHD--LKWLMESMKQPFSTSEVKCLMLQLLEGVKYLH 134
++V + V + Y++ E+M + L +L E +Q S + + Q+ ++YL
Sbjct: 68 NLVQLLGVCTRE-PPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE 126
Query: 135 DNWVLHRDLKTSNLLLNNQGVLKICDFGMSR-QYGSPLKPYTSLVVTLWYRAPELLLGAK 193
+HRDL N L+ ++K+ DFG+SR G + + + APE L
Sbjct: 127 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPE-SLAYN 185
Query: 194 KYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGAKA 253
K+S D+W+ G ++ E+ G+S PG
Sbjct: 186 KFSIKSDVWAFGVLLWEIATY-----------------------------GMSPYPGIDP 216
Query: 254 NFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKR 297
+ Q Y LL K + G P E ++L+ ++P R
Sbjct: 217 S---QVYELLEKDYRMERPEGCP---EKVYELMRACWQWNPSDR 254
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 96/202 (47%), Gaps = 18/202 (8%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILL 71
E + L I +G +G V + G VA+K +K D F L E +++
Sbjct: 22 ELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIK------NDATAQAF----LAEASVMT 69
Query: 72 SFDHPSIVNVKEVVMDDHDSVYMVMEYMEHD--LKWLMESMKQPFSTSEVKCLMLQLLEG 129
H ++V + V++++ +Y+V EYM + +L + + L + E
Sbjct: 70 QLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEA 129
Query: 130 VKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELL 189
++YL N +HRDL N+L++ V K+ DFG++++ S T + W APE L
Sbjct: 130 MEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD--TGKLPVKW-TAPEAL 186
Query: 190 LGAKKYSTAVDMWSVGCIMAEL 211
KK+ST D+WS G ++ E+
Sbjct: 187 R-EKKFSTKSDVWSFGILLWEI 207
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 116/284 (40%), Gaps = 49/284 (17%)
Query: 17 NKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHP 76
+K+ G YG VY KK VA+K +K ED +E L+E ++ HP
Sbjct: 21 HKLGGGQYGEVYEGVWKKYSLTVAVKTLK------EDTMEVE---EFLKEAAVMKEIKHP 71
Query: 77 SIVNVKEVVMDDHDSVYMVMEYMEHD--LKWLMESMKQPFSTSEVKCLMLQLLEGVKYLH 134
++V + V + Y++ E+M + L +L E +Q + + + Q+ ++YL
Sbjct: 72 NLVQLLGVCTRE-PPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 130
Query: 135 DNWVLHRDLKTSNLLLNNQGVLKICDFGMSR-QYGSPLKPYTSLVVTLWYRAPELLLGAK 193
+HRDL N L+ ++K+ DFG+SR G + + + APE L
Sbjct: 131 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE-SLAYN 189
Query: 194 KYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGAKA 253
K+S D+W+ G ++ E+ G+S PG
Sbjct: 190 KFSIKSDVWAFGVLLWEIATY-----------------------------GMSPYPGIDL 220
Query: 254 NFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKR 297
+ Q Y LL K + G P E ++L+ ++P R
Sbjct: 221 S---QVYELLEKDYRMERPEGCP---EKVYELMRACWQWNPSDR 258
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 93/198 (46%), Gaps = 14/198 (7%)
Query: 17 NKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHP 76
+K+ G YG VY KK VA+K +K ED +E L+E ++ HP
Sbjct: 226 HKLGGGQYGEVYEGVWKKYSLTVAVKTLK------EDTMEVE---EFLKEAAVMKEIKHP 276
Query: 77 SIVNVKEVVMDDHDSVYMVMEYMEHD--LKWLMESMKQPFSTSEVKCLMLQLLEGVKYLH 134
++V + V + Y++ E+M + L +L E +Q S + + Q+ ++YL
Sbjct: 277 NLVQLLGVCTRE-PPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE 335
Query: 135 DNWVLHRDLKTSNLLLNNQGVLKICDFGMSR-QYGSPLKPYTSLVVTLWYRAPELLLGAK 193
+HR+L N L+ ++K+ DFG+SR G + + + APE L
Sbjct: 336 KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE-SLAYN 394
Query: 194 KYSTAVDMWSVGCIMAEL 211
K+S D+W+ G ++ E+
Sbjct: 395 KFSIKSDVWAFGVLLWEI 412
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 132/300 (44%), Gaps = 55/300 (18%)
Query: 18 KISEGTYGIVYRARDKKSG-----EIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
++ +G + +V R K +G +I+ KK+ +K LE RE I
Sbjct: 36 ELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQK---LE--------REARICRK 84
Query: 73 FDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKY 132
HP+IV + + + ++ Y+V + + + ++ +S ++ + Q+LE + Y
Sbjct: 85 LQHPNIVRLHDSIQEESFH-YLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAY 143
Query: 133 LHDNWVLHRDLKTSNLLLNNQ---GVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELL 189
H N ++HR+LK NLLL ++ +K+ DFG++ + + + T Y +PE +
Sbjct: 144 CHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS-EAWHGFAGTPGYLSPE-V 201
Query: 190 LGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELP 249
L YS VD+W+ G I+ LL P F + DQ +++
Sbjct: 202 LKKDPYSKPVDIWACGVILYILLVGYPPF---WDEDQ-HRLY------------------ 239
Query: 250 GAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWF 309
A Y+ +P+ + ++ L++ +LT +P+KRIT D AL W
Sbjct: 240 ---AQIKAGAYD-----YPSPEWD---TVTPEAKSLIDSMLTVNPKKRITADQALKVPWI 288
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 93/198 (46%), Gaps = 14/198 (7%)
Query: 17 NKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHP 76
+K+ G YG VY KK VA+K +K ED +E L+E ++ HP
Sbjct: 24 HKLGGGQYGEVYEGVWKKYSLTVAVKTLK------EDTMEVE---EFLKEAAVMKEIKHP 74
Query: 77 SIVNVKEVVMDDHDSVYMVMEYMEHD--LKWLMESMKQPFSTSEVKCLMLQLLEGVKYLH 134
++V + V + Y++ E+M + L +L E +Q + + + Q+ ++YL
Sbjct: 75 NLVQLLGVCTRE-PPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 133
Query: 135 DNWVLHRDLKTSNLLLNNQGVLKICDFGMSR-QYGSPLKPYTSLVVTLWYRAPELLLGAK 193
+HRDL N L+ ++K+ DFG+SR G + + + APE L
Sbjct: 134 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE-SLAYN 192
Query: 194 KYSTAVDMWSVGCIMAEL 211
K+S D+W+ G ++ E+
Sbjct: 193 KFSIKSDVWAFGVLLWEI 210
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 116/284 (40%), Gaps = 49/284 (17%)
Query: 17 NKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHP 76
+K+ G YG VY KK VA+K +K ED +E L+E ++ HP
Sbjct: 21 HKLGGGQYGEVYEGVWKKYSLTVAVKTLK------EDTMEVE---EFLKEAAVMKEIKHP 71
Query: 77 SIVNVKEVVMDDHDSVYMVMEYMEHD--LKWLMESMKQPFSTSEVKCLMLQLLEGVKYLH 134
++V + V + Y++ E+M + L +L E +Q + + + Q+ ++YL
Sbjct: 72 NLVQLLGVCTRE-PPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 130
Query: 135 DNWVLHRDLKTSNLLLNNQGVLKICDFGMSR-QYGSPLKPYTSLVVTLWYRAPELLLGAK 193
+HRDL N L+ ++K+ DFG+SR G + + + APE L
Sbjct: 131 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE-SLAYN 189
Query: 194 KYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGAKA 253
K+S D+W+ G ++ E+ G+S PG
Sbjct: 190 KFSIKSDVWAFGVLLWEIATY-----------------------------GMSPYPGIDL 220
Query: 254 NFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKR 297
+ Q Y LL K + G P E ++L+ ++P R
Sbjct: 221 S---QVYELLEKDYRMERPEGCP---EKVYELMRACWQWNPSDR 258
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 90/363 (24%), Positives = 155/363 (42%), Gaps = 79/363 (21%)
Query: 9 SVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKED-CLEYGFPISSLREI 67
+VF+ E +KI EGT+ VY L ++ VG +E L++ P S I
Sbjct: 21 NVFKIE--DKIGEGTFSSVY------------LATAQLQVGPEEKIALKHLIPTS--HPI 64
Query: 68 NILLSFDHPSIVNVKEVVMD------DHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKC 121
I ++ ++ VM +D V + M Y+EH+ +L + S EV+
Sbjct: 65 RIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIAMPYLEHE-SFL--DILNSLSFQEVRE 121
Query: 122 LMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQ-GVLKICDFGMSR--------------- 165
ML L + +K +H ++HRD+K SN L N + + DFG+++
Sbjct: 122 YMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQS 181
Query: 166 --QYGSPLKPYTSLVV-----------TLWYRAPELLLGAKKYSTAVDMWSVGCIMAELL 212
Q + S+ + T +RAPE+L +TA+DMWS G I LL
Sbjct: 182 EAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLL 241
Query: 213 AKK-PLFSGTTEVDQIDKIF------------KTLG--------TPTETIWPGLSELPGA 251
+ + P + + ++ + +I KT G P + + L G
Sbjct: 242 SGRYPFYKASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGM 301
Query: 252 KANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHE 311
++ K ++ + A + G + + +DLL++LL +P RIT ++AL H +F +
Sbjct: 302 DSSTPKLTSDI---QGHATNLEGWNEVPDEAYDLLDKLLDLNPASRITAEEALLHPFFKD 358
Query: 312 VPL 314
+ L
Sbjct: 359 MSL 361
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 131/300 (43%), Gaps = 55/300 (18%)
Query: 18 KISEGTYGIVYRARDKKSG-----EIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
++ +G + +V R K +G +I+ KK+ +K LE RE I
Sbjct: 13 ELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQK---LE--------REARICRK 61
Query: 73 FDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKY 132
HP+IV + + + ++ Y+V + + + ++ +S ++ + Q+LE + Y
Sbjct: 62 LQHPNIVRLHDSIQEESFH-YLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAY 120
Query: 133 LHDNWVLHRDLKTSNLLLNNQ---GVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELL 189
H N ++HR+LK NLLL ++ +K+ DFG++ + + + T Y +PE +
Sbjct: 121 CHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS-EAWHGFAGTPGYLSPE-V 178
Query: 190 LGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELP 249
L YS VD+W+ G I+ LL P F + DQ +++ + G + P
Sbjct: 179 LKKDPYSKPVDIWACGVILYILLVGYPPF---WDEDQ-HRLYAQIKA-------GAYDYP 227
Query: 250 GAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWF 309
+ + ++ L++ +LT +P+KRIT D AL W
Sbjct: 228 SPEWD----------------------TVTPEAKSLIDSMLTVNPKKRITADQALKVPWI 265
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 93/198 (46%), Gaps = 14/198 (7%)
Query: 17 NKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHP 76
+K+ G YG VY KK VA+K +K ED +E L+E ++ HP
Sbjct: 32 HKLGGGQYGEVYEGVWKKYSLTVAVKTLK------EDTMEVE---EFLKEAAVMKEIKHP 82
Query: 77 SIVNVKEVVMDDHDSVYMVMEYMEHD--LKWLMESMKQPFSTSEVKCLMLQLLEGVKYLH 134
++V + V + Y++ E+M + L +L E +Q + + + Q+ ++YL
Sbjct: 83 NLVQLLGVCTRE-PPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 141
Query: 135 DNWVLHRDLKTSNLLLNNQGVLKICDFGMSR-QYGSPLKPYTSLVVTLWYRAPELLLGAK 193
+HRDL N L+ ++K+ DFG+SR G + + + APE L
Sbjct: 142 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE-SLAYN 200
Query: 194 KYSTAVDMWSVGCIMAEL 211
K+S D+W+ G ++ E+
Sbjct: 201 KFSIKSDVWAFGVLLWEI 218
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 96/202 (47%), Gaps = 18/202 (8%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILL 71
E + L I +G +G V + G VA+K +K D F L E +++
Sbjct: 7 ELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIK------NDATAQAF----LAEASVMT 54
Query: 72 SFDHPSIVNVKEVVMDDHDSVYMVMEYMEHD--LKWLMESMKQPFSTSEVKCLMLQLLEG 129
H ++V + V++++ +Y+V EYM + +L + + L + E
Sbjct: 55 QLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEA 114
Query: 130 VKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELL 189
++YL N +HRDL N+L++ V K+ DFG++++ S T + W APE L
Sbjct: 115 MEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD--TGKLPVKW-TAPEAL 171
Query: 190 LGAKKYSTAVDMWSVGCIMAEL 211
KK+ST D+WS G ++ E+
Sbjct: 172 R-EKKFSTKSDVWSFGILLWEI 192
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 115/237 (48%), Gaps = 23/237 (9%)
Query: 16 LNKISEGTYGIVYRAR-DKKSGEIV--ALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
L K+ +G++G+V R D SG+ V A+K +K +V + + ++ +RE+N + S
Sbjct: 23 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMD-----DFIREVNAMHS 77
Query: 73 FDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQP---FSTSEVKCLMLQLLEG 129
DH +++ + VV+ + MV E L L++ +++ F + +Q+ EG
Sbjct: 78 LDHRNLIRLYGVVLTP--PMKMVTELAP--LGSLLDRLRKHQGHFLLGTLSRYAVQVAEG 133
Query: 130 VKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYT---SLVVTLWYRAP 186
+ YL +HRDL NLLL + ++KI DFG+ R Y V + AP
Sbjct: 134 MGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAP 193
Query: 187 ELLLGAKKYSTAVDMWSVGCIMAELL--AKKPL--FSGTTEVDQIDKIFKTLGTPTE 239
E L + +S A D W G + E+ ++P +G+ + +IDK + L P +
Sbjct: 194 E-SLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPED 249
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 115/237 (48%), Gaps = 23/237 (9%)
Query: 16 LNKISEGTYGIVYRAR-DKKSGEIV--ALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
L K+ +G++G+V R D SG+ V A+K +K +V + + ++ +RE+N + S
Sbjct: 13 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMD-----DFIREVNAMHS 67
Query: 73 FDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQP---FSTSEVKCLMLQLLEG 129
DH +++ + VV+ + MV E L L++ +++ F + +Q+ EG
Sbjct: 68 LDHRNLIRLYGVVLTP--PMKMVTELAP--LGSLLDRLRKHQGHFLLGTLSRYAVQVAEG 123
Query: 130 VKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYT---SLVVTLWYRAP 186
+ YL +HRDL NLLL + ++KI DFG+ R Y V + AP
Sbjct: 124 MGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAP 183
Query: 187 ELLLGAKKYSTAVDMWSVGCIMAELL--AKKPL--FSGTTEVDQIDKIFKTLGTPTE 239
E L + +S A D W G + E+ ++P +G+ + +IDK + L P +
Sbjct: 184 E-SLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPED 239
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 100/219 (45%), Gaps = 9/219 (4%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
F++L+++ G+YG V++ R K+ G + A+K+ +D + S ++
Sbjct: 59 FQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVG---- 114
Query: 73 FDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKY 132
HP V + E ++ +Y+ E L+ E+ ++V + L + +
Sbjct: 115 -QHPCCVRL-EQAWEEGGILYLQTELCGPSLQQHCEAWGASLPEAQVWGYLRDTLLALAH 172
Query: 133 LHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGA 192
LH ++H D+K +N+ L +G K+ DFG+ + G+ Y APELL G+
Sbjct: 173 LHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQ-EGDPRYMAPELLQGS 231
Query: 193 KKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIF 231
Y TA D++S+G + E+ L G Q+ + +
Sbjct: 232 --YGTAADVFSLGLTILEVACNMELPHGGEGWQQLRQGY 268
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 115/237 (48%), Gaps = 23/237 (9%)
Query: 16 LNKISEGTYGIVYRAR-DKKSGEIV--ALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
L K+ +G++G+V R D SG+ V A+K +K +V + + ++ +RE+N + S
Sbjct: 17 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMD-----DFIREVNAMHS 71
Query: 73 FDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQP---FSTSEVKCLMLQLLEG 129
DH +++ + VV+ + MV E L L++ +++ F + +Q+ EG
Sbjct: 72 LDHRNLIRLYGVVLTP--PMKMVTELAP--LGSLLDRLRKHQGHFLLGTLSRYAVQVAEG 127
Query: 130 VKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYT---SLVVTLWYRAP 186
+ YL +HRDL NLLL + ++KI DFG+ R Y V + AP
Sbjct: 128 MGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAP 187
Query: 187 ELLLGAKKYSTAVDMWSVGCIMAELL--AKKPL--FSGTTEVDQIDKIFKTLGTPTE 239
E L + +S A D W G + E+ ++P +G+ + +IDK + L P +
Sbjct: 188 E-SLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPED 243
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 115/237 (48%), Gaps = 23/237 (9%)
Query: 16 LNKISEGTYGIVYRAR-DKKSGEIV--ALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
L K+ +G++G+V R D SG+ V A+K +K +V + + ++ +RE+N + S
Sbjct: 17 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMD-----DFIREVNAMHS 71
Query: 73 FDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQP---FSTSEVKCLMLQLLEG 129
DH +++ + VV+ + MV E L L++ +++ F + +Q+ EG
Sbjct: 72 LDHRNLIRLYGVVLTP--PMKMVTELAP--LGSLLDRLRKHQGHFLLGTLSRYAVQVAEG 127
Query: 130 VKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYT---SLVVTLWYRAP 186
+ YL +HRDL NLLL + ++KI DFG+ R Y V + AP
Sbjct: 128 MGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAP 187
Query: 187 ELLLGAKKYSTAVDMWSVGCIMAELL--AKKPL--FSGTTEVDQIDKIFKTLGTPTE 239
E L + +S A D W G + E+ ++P +G+ + +IDK + L P +
Sbjct: 188 E-SLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPED 243
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 115/237 (48%), Gaps = 23/237 (9%)
Query: 16 LNKISEGTYGIVYRAR-DKKSGEIV--ALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
L K+ +G++G+V R D SG+ V A+K +K +V + + ++ +RE+N + S
Sbjct: 13 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMD-----DFIREVNAMHS 67
Query: 73 FDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQP---FSTSEVKCLMLQLLEG 129
DH +++ + VV+ + MV E L L++ +++ F + +Q+ EG
Sbjct: 68 LDHRNLIRLYGVVLTP--PMKMVTELAP--LGSLLDRLRKHQGHFLLGTLSRYAVQVAEG 123
Query: 130 VKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYT---SLVVTLWYRAP 186
+ YL +HRDL NLLL + ++KI DFG+ R Y V + AP
Sbjct: 124 MGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAP 183
Query: 187 ELLLGAKKYSTAVDMWSVGCIMAELL--AKKPL--FSGTTEVDQIDKIFKTLGTPTE 239
E L + +S A D W G + E+ ++P +G+ + +IDK + L P +
Sbjct: 184 E-SLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPED 239
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 94/202 (46%), Gaps = 12/202 (5%)
Query: 19 ISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSI 78
I G +G VY + KK+ V + G L E I+ F HP++
Sbjct: 30 IGRGHFGCVYHGTLLDNDG----KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 85
Query: 79 VNVKEVVMDDHDSVYMVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNW 137
+++ + + S +V+ YM+H DL+ + + + ++ LQ+ +G+KYL
Sbjct: 86 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK 145
Query: 138 VLHRDLKTSNLLLNNQGVLKICDFGMSR-----QYGSPLKPYTSLVVTLWYRAPELLLGA 192
+HRDL N +L+ + +K+ DFG++R +Y S + + W L
Sbjct: 146 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES--LQT 203
Query: 193 KKYSTAVDMWSVGCIMAELLAK 214
+K++T D+WS G ++ EL+ +
Sbjct: 204 QKFTTKSDVWSFGVLLWELMTR 225
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 93/198 (46%), Gaps = 14/198 (7%)
Query: 17 NKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHP 76
+K+ G YG VY KK VA+K +K ED +E L+E ++ HP
Sbjct: 265 HKLGGGQYGEVYEGVWKKYSLTVAVKTLK------EDTMEVE---EFLKEAAVMKEIKHP 315
Query: 77 SIVNVKEVVMDDHDSVYMVMEYMEHD--LKWLMESMKQPFSTSEVKCLMLQLLEGVKYLH 134
++V + V + Y++ E+M + L +L E +Q + + + Q+ ++YL
Sbjct: 316 NLVQLLGVCTRE-PPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 374
Query: 135 DNWVLHRDLKTSNLLLNNQGVLKICDFGMSR-QYGSPLKPYTSLVVTLWYRAPELLLGAK 193
+HR+L N L+ ++K+ DFG+SR G + + + APE L
Sbjct: 375 KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE-SLAYN 433
Query: 194 KYSTAVDMWSVGCIMAEL 211
K+S D+W+ G ++ E+
Sbjct: 434 KFSIKSDVWAFGVLLWEI 451
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 94/202 (46%), Gaps = 12/202 (5%)
Query: 19 ISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSI 78
I G +G VY + KK+ V + G L E I+ F HP++
Sbjct: 56 IGRGHFGCVYHGTLLDNDG----KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 111
Query: 79 VNVKEVVMDDHDSVYMVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNW 137
+++ + + S +V+ YM+H DL+ + + + ++ LQ+ +G+KYL
Sbjct: 112 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK 171
Query: 138 VLHRDLKTSNLLLNNQGVLKICDFGMSR-----QYGSPLKPYTSLVVTLWYRAPELLLGA 192
+HRDL N +L+ + +K+ DFG++R +Y S + + W L
Sbjct: 172 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES--LQT 229
Query: 193 KKYSTAVDMWSVGCIMAELLAK 214
+K++T D+WS G ++ EL+ +
Sbjct: 230 QKFTTKSDVWSFGVLLWELMTR 251
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 94/202 (46%), Gaps = 12/202 (5%)
Query: 19 ISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSI 78
I G +G VY + KK+ V + G L E I+ F HP++
Sbjct: 38 IGRGHFGCVYHGTLLDNDG----KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 93
Query: 79 VNVKEVVMDDHDSVYMVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNW 137
+++ + + S +V+ YM+H DL+ + + + ++ LQ+ +G+KYL
Sbjct: 94 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK 153
Query: 138 VLHRDLKTSNLLLNNQGVLKICDFGMSR-----QYGSPLKPYTSLVVTLWYRAPELLLGA 192
+HRDL N +L+ + +K+ DFG++R +Y S + + W L
Sbjct: 154 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES--LQT 211
Query: 193 KKYSTAVDMWSVGCIMAELLAK 214
+K++T D+WS G ++ EL+ +
Sbjct: 212 QKFTTKSDVWSFGVLLWELMTR 233
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 94/202 (46%), Gaps = 12/202 (5%)
Query: 19 ISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSI 78
I G +G VY + KK+ V + G L E I+ F HP++
Sbjct: 36 IGRGHFGCVYHGTLLDNDG----KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 91
Query: 79 VNVKEVVMDDHDSVYMVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNW 137
+++ + + S +V+ YM+H DL+ + + + ++ LQ+ +G+KYL
Sbjct: 92 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK 151
Query: 138 VLHRDLKTSNLLLNNQGVLKICDFGMSR-----QYGSPLKPYTSLVVTLWYRAPELLLGA 192
+HRDL N +L+ + +K+ DFG++R +Y S + + W L
Sbjct: 152 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES--LQT 209
Query: 193 KKYSTAVDMWSVGCIMAELLAK 214
+K++T D+WS G ++ EL+ +
Sbjct: 210 QKFTTKSDVWSFGVLLWELMTR 231
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 94/202 (46%), Gaps = 12/202 (5%)
Query: 19 ISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSI 78
I G +G VY + KK+ V + G L E I+ F HP++
Sbjct: 35 IGRGHFGCVYHGTLLDNDG----KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 90
Query: 79 VNVKEVVMDDHDSVYMVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNW 137
+++ + + S +V+ YM+H DL+ + + + ++ LQ+ +G+KYL
Sbjct: 91 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK 150
Query: 138 VLHRDLKTSNLLLNNQGVLKICDFGMSR-----QYGSPLKPYTSLVVTLWYRAPELLLGA 192
+HRDL N +L+ + +K+ DFG++R +Y S + + W L
Sbjct: 151 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES--LQT 208
Query: 193 KKYSTAVDMWSVGCIMAELLAK 214
+K++T D+WS G ++ EL+ +
Sbjct: 209 QKFTTKSDVWSFGVLLWELMTR 230
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 94/202 (46%), Gaps = 12/202 (5%)
Query: 19 ISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSI 78
I G +G VY + KK+ V + G L E I+ F HP++
Sbjct: 37 IGRGHFGCVYHGTLLDNDG----KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 92
Query: 79 VNVKEVVMDDHDSVYMVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNW 137
+++ + + S +V+ YM+H DL+ + + + ++ LQ+ +G+KYL
Sbjct: 93 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK 152
Query: 138 VLHRDLKTSNLLLNNQGVLKICDFGMSR-----QYGSPLKPYTSLVVTLWYRAPELLLGA 192
+HRDL N +L+ + +K+ DFG++R +Y S + + W L
Sbjct: 153 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES--LQT 210
Query: 193 KKYSTAVDMWSVGCIMAELLAK 214
+K++T D+WS G ++ EL+ +
Sbjct: 211 QKFTTKSDVWSFGVLLWELMTR 232
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 94/202 (46%), Gaps = 12/202 (5%)
Query: 19 ISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSI 78
I G +G VY + KK+ V + G L E I+ F HP++
Sbjct: 57 IGRGHFGCVYHGTLLDNDG----KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 112
Query: 79 VNVKEVVMDDHDSVYMVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNW 137
+++ + + S +V+ YM+H DL+ + + + ++ LQ+ +G+KYL
Sbjct: 113 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK 172
Query: 138 VLHRDLKTSNLLLNNQGVLKICDFGMSR-----QYGSPLKPYTSLVVTLWYRAPELLLGA 192
+HRDL N +L+ + +K+ DFG++R +Y S + + W L
Sbjct: 173 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES--LQT 230
Query: 193 KKYSTAVDMWSVGCIMAELLAK 214
+K++T D+WS G ++ EL+ +
Sbjct: 231 QKFTTKSDVWSFGVLLWELMTR 252
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 94/202 (46%), Gaps = 12/202 (5%)
Query: 19 ISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSI 78
I G +G VY + KK+ V + G L E I+ F HP++
Sbjct: 33 IGRGHFGCVYHGTLLDNDG----KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 88
Query: 79 VNVKEVVMDDHDSVYMVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNW 137
+++ + + S +V+ YM+H DL+ + + + ++ LQ+ +G+KYL
Sbjct: 89 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK 148
Query: 138 VLHRDLKTSNLLLNNQGVLKICDFGMSR-----QYGSPLKPYTSLVVTLWYRAPELLLGA 192
+HRDL N +L+ + +K+ DFG++R +Y S + + W L
Sbjct: 149 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES--LQT 206
Query: 193 KKYSTAVDMWSVGCIMAELLAK 214
+K++T D+WS G ++ EL+ +
Sbjct: 207 QKFTTKSDVWSFGVLLWELMTR 228
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 115/237 (48%), Gaps = 23/237 (9%)
Query: 16 LNKISEGTYGIVYRAR-DKKSGEIV--ALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
L K+ +G++G+V R D SG+ V A+K +K +V + + ++ +RE+N + S
Sbjct: 23 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMD-----DFIREVNAMHS 77
Query: 73 FDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQP---FSTSEVKCLMLQLLEG 129
DH +++ + VV+ + MV E L L++ +++ F + +Q+ EG
Sbjct: 78 LDHRNLIRLYGVVLTP--PMKMVTELAP--LGSLLDRLRKHQGHFLLGTLSRYAVQVAEG 133
Query: 130 VKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSR---QYGSPLKPYTSLVVTLWYRAP 186
+ YL +HRDL NLLL + ++KI DFG+ R Q V + AP
Sbjct: 134 MGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAP 193
Query: 187 ELLLGAKKYSTAVDMWSVGCIMAELL--AKKPL--FSGTTEVDQIDKIFKTLGTPTE 239
E L + +S A D W G + E+ ++P +G+ + +IDK + L P +
Sbjct: 194 E-SLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPED 249
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 115/237 (48%), Gaps = 23/237 (9%)
Query: 16 LNKISEGTYGIVYRAR-DKKSGEIV--ALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
L K+ +G++G+V R D SG+ V A+K +K +V + + ++ +RE+N + S
Sbjct: 13 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMD-----DFIREVNAMHS 67
Query: 73 FDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQP---FSTSEVKCLMLQLLEG 129
DH +++ + VV+ + MV E L L++ +++ F + +Q+ EG
Sbjct: 68 LDHRNLIRLYGVVLTP--PMKMVTELAP--LGSLLDRLRKHQGHFLLGTLSRYAVQVAEG 123
Query: 130 VKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSR---QYGSPLKPYTSLVVTLWYRAP 186
+ YL +HRDL NLLL + ++KI DFG+ R Q V + AP
Sbjct: 124 MGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAP 183
Query: 187 ELLLGAKKYSTAVDMWSVGCIMAELL--AKKPL--FSGTTEVDQIDKIFKTLGTPTE 239
E L + +S A D W G + E+ ++P +G+ + +IDK + L P +
Sbjct: 184 E-SLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPED 239
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 93/198 (46%), Gaps = 14/198 (7%)
Query: 17 NKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHP 76
+K+ G YG VY KK VA+K +K ED +E L+E ++ HP
Sbjct: 223 HKLGGGQYGEVYEGVWKKYSLTVAVKTLK------EDTMEVE---EFLKEAAVMKEIKHP 273
Query: 77 SIVNVKEVVMDDHDSVYMVMEYMEHD--LKWLMESMKQPFSTSEVKCLMLQLLEGVKYLH 134
++V + V + Y++ E+M + L +L E +Q + + + Q+ ++YL
Sbjct: 274 NLVQLLGVCTRE-PPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 332
Query: 135 DNWVLHRDLKTSNLLLNNQGVLKICDFGMSR-QYGSPLKPYTSLVVTLWYRAPELLLGAK 193
+HR+L N L+ ++K+ DFG+SR G + + + APE L
Sbjct: 333 KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE-SLAYN 391
Query: 194 KYSTAVDMWSVGCIMAEL 211
K+S D+W+ G ++ E+
Sbjct: 392 KFSIKSDVWAFGVLLWEI 409
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 94/202 (46%), Gaps = 12/202 (5%)
Query: 19 ISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSI 78
I G +G VY + KK+ V + G L E I+ F HP++
Sbjct: 38 IGRGHFGCVYHGTLLDNDG----KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 93
Query: 79 VNVKEVVMDDHDSVYMVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNW 137
+++ + + S +V+ YM+H DL+ + + + ++ LQ+ +G+KYL
Sbjct: 94 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK 153
Query: 138 VLHRDLKTSNLLLNNQGVLKICDFGMSR-----QYGSPLKPYTSLVVTLWYRAPELLLGA 192
+HRDL N +L+ + +K+ DFG++R +Y S + + W L
Sbjct: 154 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES--LQT 211
Query: 193 KKYSTAVDMWSVGCIMAELLAK 214
+K++T D+WS G ++ EL+ +
Sbjct: 212 QKFTTKSDVWSFGVLLWELMTR 233
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 107/217 (49%), Gaps = 18/217 (8%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILL 71
E E +I +G +G+V++ R K +VA+K + + E + F RE+ I+
Sbjct: 20 EIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQ-EFQREVFIMS 78
Query: 72 SFDHPSIVNVKEVVMDDHDSVYMVMEYME-HDLKWLMESMKQPFSTSEVKCLMLQLLEGV 130
+ +HP+IV + ++ H+ MVME++ DL + P S LML + G+
Sbjct: 79 NLNHPNIVKLYGLM---HNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGI 135
Query: 131 KYLHDNW--VLHRDLKTSNLLL-----NNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWY 183
+Y+ + ++HRDL++ N+ L N K+ DFG+S+Q + + L+ +
Sbjct: 136 EYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQ---SVHSVSGLLGNFQW 192
Query: 184 RAPELLLGAKK--YSTAVDMWSVGCIMAELLAKKPLF 218
APE +GA++ Y+ D +S I+ +L + F
Sbjct: 193 MAPE-TIGAEEESYTEKADTYSFAMILYTILTGEGPF 228
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 110/221 (49%), Gaps = 30/221 (13%)
Query: 16 LNKISEGTYGIVYR--ARDKKSGEI---VALKKVKMNVGRKEDCLEYGFPISSLREINIL 70
L ++ +G++G+VY ARD GE VA+K V + +E I L E +++
Sbjct: 23 LRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRER-------IEFLNEASVM 75
Query: 71 LSFDHPSIVNVKEVVMDDHDSVYMVMEYMEH-DLKWLMESMKQ---------PFSTSEVK 120
F +V + VV ++ +VME M H DLK + S++ P + E+
Sbjct: 76 KGFTCHHVVRLLGVVSKGQPTL-VVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMI 134
Query: 121 CLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQ-YGSPL--KPYTSL 177
+ ++ +G+ YL+ +HR+L N ++ + +KI DFGM+R Y + K L
Sbjct: 135 QMAAEIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGL 194
Query: 178 VVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAEL--LAKKP 216
+ W APE L ++T+ DMWS G ++ E+ LA++P
Sbjct: 195 LPVRWM-APESLKDG-VFTTSSDMWSFGVVLWEITSLAEQP 233
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 110/221 (49%), Gaps = 30/221 (13%)
Query: 16 LNKISEGTYGIVYR--ARDKKSGEI---VALKKVKMNVGRKEDCLEYGFPISSLREINIL 70
L ++ +G++G+VY ARD GE VA+K V + +E I L E +++
Sbjct: 22 LRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRER-------IEFLNEASVM 74
Query: 71 LSFDHPSIVNVKEVVMDDHDSVYMVMEYMEH-DLKWLMESMKQ---------PFSTSEVK 120
F +V + VV ++ +VME M H DLK + S++ P + E+
Sbjct: 75 KGFTCHHVVRLLGVVSKGQPTL-VVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMI 133
Query: 121 CLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQ-YGSPL--KPYTSL 177
+ ++ +G+ YL+ +HR+L N ++ + +KI DFGM+R Y + K L
Sbjct: 134 QMAAEIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGL 193
Query: 178 VVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAEL--LAKKP 216
+ W APE L ++T+ DMWS G ++ E+ LA++P
Sbjct: 194 LPVRWM-APESLKDG-VFTTSSDMWSFGVVLWEITSLAEQP 232
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 92/198 (46%), Gaps = 14/198 (7%)
Query: 17 NKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHP 76
+K+ G YG VY KK VA+K +K ED +E L+E ++ HP
Sbjct: 38 HKLGGGQYGEVYVGVWKKYSLTVAVKTLK------EDTMEVE---EFLKEAAVMKEIKHP 88
Query: 77 SIVNVKEVVMDDHDSVYMVMEYMEHD--LKWLMESMKQPFSTSEVKCLMLQLLEGVKYLH 134
++V + V + Y+V EYM + L +L E ++ + + + Q+ ++YL
Sbjct: 89 NLVQLLGVCTLE-PPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLE 147
Query: 135 DNWVLHRDLKTSNLLLNNQGVLKICDFGMSR-QYGSPLKPYTSLVVTLWYRAPELLLGAK 193
+HRDL N L+ V+K+ DFG+SR G + + + APE L
Sbjct: 148 KKNFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE-SLAYN 206
Query: 194 KYSTAVDMWSVGCIMAEL 211
+S D+W+ G ++ E+
Sbjct: 207 TFSIKSDVWAFGVLLWEI 224
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 108/232 (46%), Gaps = 23/232 (9%)
Query: 4 LQGCRSVF--EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPI 61
L C + ++ ++ + G +G V+ A DK+ + V +K +K EDC +
Sbjct: 15 LAACEGEYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKE-KVLEDCWIEDPKL 73
Query: 62 SSLR-EINILLSFDHPSIVNVKEV---------VMDDHDSVYMVMEYMEHDLKWLMESMK 111
+ EI IL +H +I+ V ++ VM+ H S + +++ + +
Sbjct: 74 GKVTLEIAILSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPR-----LD 128
Query: 112 QPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPL 171
+P ++ + QL+ V YL ++HRD+K N+++ +K+ DFG S Y
Sbjct: 129 EPLASY----IFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFG-SAAYLERG 183
Query: 172 KPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTE 223
K + + T+ Y APE+L+G ++MWS+G + L+ ++ F E
Sbjct: 184 KLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEE 235
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 115/284 (40%), Gaps = 49/284 (17%)
Query: 17 NKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHP 76
+K+ G YG VY KK VA+K +K ED +E L+E ++ HP
Sbjct: 21 HKLGGGQYGEVYEGVWKKYSLTVAVKTLK------EDTMEVE---EFLKEAAVMKEIKHP 71
Query: 77 SIVNVKEVVMDDHDSVYMVMEYMEHD--LKWLMESMKQPFSTSEVKCLMLQLLEGVKYLH 134
++V + V + Y++ E+M + L +L E +Q + + + Q+ ++YL
Sbjct: 72 NLVQLLGVCTRE-PPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 130
Query: 135 DNWVLHRDLKTSNLLLNNQGVLKICDFGMSR-QYGSPLKPYTSLVVTLWYRAPELLLGAK 193
+HRDL N L+ ++K+ DFG+SR G + + APE L
Sbjct: 131 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPE-SLAYN 189
Query: 194 KYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGAKA 253
K+S D+W+ G ++ E+ G+S PG
Sbjct: 190 KFSIKSDVWAFGVLLWEIATY-----------------------------GMSPYPGIDL 220
Query: 254 NFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKR 297
+ Q Y LL K + G P E ++L+ ++P R
Sbjct: 221 S---QVYELLEKDYRMERPEGCP---EKVYELMRACWQWNPSDR 258
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 100/207 (48%), Gaps = 18/207 (8%)
Query: 17 NKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHP 76
NK EG +G+VY+ + VA+KK+ V + L+ F +EI + H
Sbjct: 28 NKXGEGGFGVVYKGYVNNT--TVAVKKLAAMVDITTEELKQQFD----QEIKVXAKCQHE 81
Query: 77 SIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMK----QPFSTSEVKCLMLQ-LLEGVK 131
++V + D D + + Y+ L++ + P + +C + Q G+
Sbjct: 82 NLVELLGFSSDGDD---LCLVYVYXPNGSLLDRLSCLDGTPPLSWHXRCKIAQGAANGIN 138
Query: 132 YLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSR--QYGSPLKPYTSLVVTLWYRAPELL 189
+LH+N +HRD+K++N+LL+ KI DFG++R + + + +V T Y APE L
Sbjct: 139 FLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPEAL 198
Query: 190 LGAKKYSTAVDMWSVGCIMAELLAKKP 216
G + + D++S G ++ E++ P
Sbjct: 199 RG--EITPKSDIYSFGVVLLEIITGLP 223
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 96/201 (47%), Gaps = 10/201 (4%)
Query: 19 ISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSI 78
I G +G VY + KK+ V + G L E I+ F HP++
Sbjct: 37 IGRGHFGCVYHGTLLDNDG----KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 92
Query: 79 VNVKEVVMDDHDSVYMVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNW 137
+++ + + S +V+ YM+H DL+ + + + ++ LQ+ +G+KYL
Sbjct: 93 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK 152
Query: 138 VLHRDLKTSNLLLNNQGVLKICDFGMSR----QYGSPLKPYTSLVVTLWYRAPELLLGAK 193
+HRDL N +L+ + +K+ DFG++R + + T + + + A E L +
Sbjct: 153 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALE-SLQTQ 211
Query: 194 KYSTAVDMWSVGCIMAELLAK 214
K++T D+WS G ++ EL+ +
Sbjct: 212 KFTTKSDVWSFGVLLWELMTR 232
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 92/198 (46%), Gaps = 14/198 (7%)
Query: 17 NKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHP 76
+K+ G YG VY KK VA+K +K ED +E L+E ++ HP
Sbjct: 20 HKLGGGQYGEVYEGVWKKYSLTVAVKTLK------EDTMEVE---EFLKEAAVMKEIKHP 70
Query: 77 SIVNVKEVVMDDHDSVYMVMEYMEHD--LKWLMESMKQPFSTSEVKCLMLQLLEGVKYLH 134
++V + V + Y++ E+M + L +L E +Q + + + Q+ ++YL
Sbjct: 71 NLVQLLGVCTRE-PPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 129
Query: 135 DNWVLHRDLKTSNLLLNNQGVLKICDFGMSR-QYGSPLKPYTSLVVTLWYRAPELLLGAK 193
+HRDL N L+ ++K+ DFG+SR G + + APE L
Sbjct: 130 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPE-SLAYN 188
Query: 194 KYSTAVDMWSVGCIMAEL 211
K+S D+W+ G ++ E+
Sbjct: 189 KFSIKSDVWAFGVLLWEI 206
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 95/202 (47%), Gaps = 18/202 (8%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILL 71
E + L I +G +G V + G VA+K +K D F L E +++
Sbjct: 13 ELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIK------NDATAQAF----LAEASVMT 60
Query: 72 SFDHPSIVNVKEVVMDDHDSVYMVMEYMEHD--LKWLMESMKQPFSTSEVKCLMLQLLEG 129
H ++V + V++++ +Y+V EYM + +L + + L + E
Sbjct: 61 QLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEA 120
Query: 130 VKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELL 189
++YL N +HRDL N+L++ V K+ DFG++++ S T + W APE L
Sbjct: 121 MEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD--TGKLPVKW-TAPEAL 177
Query: 190 LGAKKYSTAVDMWSVGCIMAEL 211
A +ST D+WS G ++ E+
Sbjct: 178 REA-AFSTKSDVWSFGILLWEI 198
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 106/217 (48%), Gaps = 18/217 (8%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILL 71
E E +I +G +G+V++ R K +VA+K + + E + F RE+ I+
Sbjct: 20 EIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQ-EFQREVFIMS 78
Query: 72 SFDHPSIVNVKEVVMDDHDSVYMVMEYME-HDLKWLMESMKQPFSTSEVKCLMLQLLEGV 130
+ +HP+IV + ++ H+ MVME++ DL + P S LML + G+
Sbjct: 79 NLNHPNIVKLYGLM---HNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGI 135
Query: 131 KYLHDNW--VLHRDLKTSNLLL-----NNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWY 183
+Y+ + ++HRDL++ N+ L N K+ DFG S+Q + + L+ +
Sbjct: 136 EYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQ---SVHSVSGLLGNFQW 192
Query: 184 RAPELLLGAKK--YSTAVDMWSVGCIMAELLAKKPLF 218
APE +GA++ Y+ D +S I+ +L + F
Sbjct: 193 MAPE-TIGAEEESYTEKADTYSFAMILYTILTGEGPF 228
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 95/199 (47%), Gaps = 15/199 (7%)
Query: 18 KISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPS 77
KI G++G V+RA + G VA+K + E E+ LRE+ I+ HP+
Sbjct: 44 KIGAGSFGTVHRA--EWHGSDVAVKILMEQDFHAERVNEF------LREVAIMKRLRHPN 95
Query: 78 IVNVKEVVMDDHDSVYMVMEYMEHDLKWLM---ESMKQPFSTSEVKCLMLQLLEGVKYLH 134
IV V + + +V EY+ + + ++ + + +G+ YLH
Sbjct: 96 IVLFMGAVTQPPN-LSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH 154
Query: 135 DNW--VLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGA 192
+ ++HR+LK+ NLL++ + +K+CDFG+SR S S T + APE+L
Sbjct: 155 NRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDE 214
Query: 193 KKYSTAVDMWSVGCIMAEL 211
+ D++S G I+ EL
Sbjct: 215 PSNEKS-DVYSFGVILWEL 232
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 105/230 (45%), Gaps = 25/230 (10%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKV-KMNVGRKEDCLEYGFPISSLREINIL 70
+++ + I G +G V R K S ++ A+K + K + ++ D + E +I+
Sbjct: 76 DYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFF------WEERDIM 129
Query: 71 LSFDHPSIVNVKEVVMDDHDSVYMVMEYM-EHDLKWLMESMKQP-----FSTSEVKCLML 124
+ P +V + DD +YMVMEYM DL LM + P F T+EV
Sbjct: 130 AFANSPWVVQLFCAFQDDK-YLYMVMEYMPGGDLVNLMSNYDVPEKWAKFYTAEV----- 183
Query: 125 QLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYG-SPLKPYTSLVVTLWY 183
+ + +H ++HRD+K N+LL+ G LK+ DFG + + + + V T Y
Sbjct: 184 --VLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAVGTPDY 241
Query: 184 RAPELLL---GAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKI 230
+PE+L G Y D WSVG + E+L F + V KI
Sbjct: 242 ISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKI 291
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 94/202 (46%), Gaps = 12/202 (5%)
Query: 19 ISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSI 78
I G +G VY + KK+ V + G L E I+ F HP++
Sbjct: 38 IGRGHFGCVYHGTLLDNDG----KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 93
Query: 79 VNVKEVVMDDHDSVYMVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNW 137
+++ + + S +V+ YM+H DL+ + + + ++ LQ+ +G+K+L
Sbjct: 94 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKK 153
Query: 138 VLHRDLKTSNLLLNNQGVLKICDFGMSR-----QYGSPLKPYTSLVVTLWYRAPELLLGA 192
+HRDL N +L+ + +K+ DFG++R ++ S + + W L
Sbjct: 154 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES--LQT 211
Query: 193 KKYSTAVDMWSVGCIMAELLAK 214
+K++T D+WS G ++ EL+ +
Sbjct: 212 QKFTTKSDVWSFGVLLWELMTR 233
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 94/199 (47%), Gaps = 15/199 (7%)
Query: 18 KISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPS 77
KI G++G V+RA + G VA+K + E E+ LRE+ I+ HP+
Sbjct: 44 KIGAGSFGTVHRA--EWHGSDVAVKILMEQDFHAERVNEF------LREVAIMKRLRHPN 95
Query: 78 IVNVKEVVMDDHDSVYMVMEYMEHDLKWLM---ESMKQPFSTSEVKCLMLQLLEGVKYLH 134
IV V + + +V EY+ + + ++ + + +G+ YLH
Sbjct: 96 IVLFMGAVTQPPN-LSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH 154
Query: 135 DNW--VLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGA 192
+ ++HRDLK+ NLL++ + +K+CDFG+SR S T + APE+L
Sbjct: 155 NRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXAAGTPEWMAPEVLRDE 214
Query: 193 KKYSTAVDMWSVGCIMAEL 211
+ D++S G I+ EL
Sbjct: 215 PSNEKS-DVYSFGVILWEL 232
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 94/202 (46%), Gaps = 12/202 (5%)
Query: 19 ISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSI 78
I G +G VY + KK+ V + G L E I+ F HP++
Sbjct: 36 IGRGHFGCVYHGTLLDNDG----KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 91
Query: 79 VNVKEVVMDDHDSVYMVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNW 137
+++ + + S +V+ YM+H DL+ + + + ++ LQ+ +G+K+L
Sbjct: 92 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKK 151
Query: 138 VLHRDLKTSNLLLNNQGVLKICDFGMSR-----QYGSPLKPYTSLVVTLWYRAPELLLGA 192
+HRDL N +L+ + +K+ DFG++R ++ S + + W L
Sbjct: 152 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES--LQT 209
Query: 193 KKYSTAVDMWSVGCIMAELLAK 214
+K++T D+WS G ++ EL+ +
Sbjct: 210 QKFTTKSDVWSFGVLLWELMTR 231
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 103/230 (44%), Gaps = 25/230 (10%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKV-KMNVGRKEDCLEYGFPISSLREINIL 70
++E + I G +G V R K + ++ A+K + K + ++ D + E +I+
Sbjct: 75 DYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFF------WEERDIM 128
Query: 71 LSFDHPSIVNVKEVVMDDHDSVYMVMEYM-EHDLKWLMESMKQP-----FSTSEVKCLML 124
+ P +V + DD +YMVMEYM DL LM + P F T+EV
Sbjct: 129 AFANSPWVVQLFYAFQDDR-YLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEV----- 182
Query: 125 QLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSP-LKPYTSLVVTLWY 183
+ + +H +HRD+K N+LL+ G LK+ DFG + + + V T Y
Sbjct: 183 --VLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDY 240
Query: 184 RAPELLL---GAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKI 230
+PE+L G Y D WSVG + E+L F + V KI
Sbjct: 241 ISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKI 290
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 94/202 (46%), Gaps = 12/202 (5%)
Query: 19 ISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSI 78
I G +G VY + KK+ V + G L E I+ F HP++
Sbjct: 39 IGRGHFGCVYHGTLLDNDG----KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 94
Query: 79 VNVKEVVMDDHDSVYMVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNW 137
+++ + + S +V+ YM+H DL+ + + + ++ LQ+ +G+K+L
Sbjct: 95 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKK 154
Query: 138 VLHRDLKTSNLLLNNQGVLKICDFGMSR-----QYGSPLKPYTSLVVTLWYRAPELLLGA 192
+HRDL N +L+ + +K+ DFG++R ++ S + + W L
Sbjct: 155 FVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALES--LQT 212
Query: 193 KKYSTAVDMWSVGCIMAELLAK 214
+K++T D+WS G ++ EL+ +
Sbjct: 213 QKFTTKSDVWSFGVLLWELMTR 234
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 103/230 (44%), Gaps = 25/230 (10%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKV-KMNVGRKEDCLEYGFPISSLREINIL 70
++E + I G +G V R K + ++ A+K + K + ++ D + E +I+
Sbjct: 70 DYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFF------WEERDIM 123
Query: 71 LSFDHPSIVNVKEVVMDDHDSVYMVMEYM-EHDLKWLMESMKQP-----FSTSEVKCLML 124
+ P +V + DD +YMVMEYM DL LM + P F T+EV
Sbjct: 124 AFANSPWVVQLFYAFQDDR-YLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEV----- 177
Query: 125 QLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSP-LKPYTSLVVTLWY 183
+ + +H +HRD+K N+LL+ G LK+ DFG + + + V T Y
Sbjct: 178 --VLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDY 235
Query: 184 RAPELLL---GAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKI 230
+PE+L G Y D WSVG + E+L F + V KI
Sbjct: 236 ISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKI 285
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 94/202 (46%), Gaps = 12/202 (5%)
Query: 19 ISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSI 78
I G +G VY + KK+ V + G L E I+ F HP++
Sbjct: 43 IGRGHFGCVYHGTLLDNDG----KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 98
Query: 79 VNVKEVVMDDHDSVYMVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNW 137
+++ + + S +V+ YM+H DL+ + + + ++ LQ+ +G+K+L
Sbjct: 99 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKK 158
Query: 138 VLHRDLKTSNLLLNNQGVLKICDFGMSR-----QYGSPLKPYTSLVVTLWYRAPELLLGA 192
+HRDL N +L+ + +K+ DFG++R ++ S + + W L
Sbjct: 159 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES--LQT 216
Query: 193 KKYSTAVDMWSVGCIMAELLAK 214
+K++T D+WS G ++ EL+ +
Sbjct: 217 QKFTTKSDVWSFGVLLWELMTR 238
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 94/202 (46%), Gaps = 12/202 (5%)
Query: 19 ISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSI 78
I G +G VY + KK+ V + G L E I+ F HP++
Sbjct: 38 IGRGHFGCVYHGTLLDNDG----KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 93
Query: 79 VNVKEVVMDDHDSVYMVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNW 137
+++ + + S +V+ YM+H DL+ + + + ++ LQ+ +G+K+L
Sbjct: 94 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKK 153
Query: 138 VLHRDLKTSNLLLNNQGVLKICDFGMSR-----QYGSPLKPYTSLVVTLWYRAPELLLGA 192
+HRDL N +L+ + +K+ DFG++R ++ S + + W L
Sbjct: 154 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES--LQT 211
Query: 193 KKYSTAVDMWSVGCIMAELLAK 214
+K++T D+WS G ++ EL+ +
Sbjct: 212 QKFTTKSDVWSFGVLLWELMTR 233
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 103/230 (44%), Gaps = 25/230 (10%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKV-KMNVGRKEDCLEYGFPISSLREINIL 70
++E + I G +G V R K + ++ A+K + K + ++ D + E +I+
Sbjct: 75 DYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFF------WEERDIM 128
Query: 71 LSFDHPSIVNVKEVVMDDHDSVYMVMEYM-EHDLKWLMESMKQP-----FSTSEVKCLML 124
+ P +V + DD +YMVMEYM DL LM + P F T+EV
Sbjct: 129 AFANSPWVVQLFYAFQDDR-YLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEV----- 182
Query: 125 QLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSP-LKPYTSLVVTLWY 183
+ + +H +HRD+K N+LL+ G LK+ DFG + + + V T Y
Sbjct: 183 --VLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDY 240
Query: 184 RAPELLL---GAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKI 230
+PE+L G Y D WSVG + E+L F + V KI
Sbjct: 241 ISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKI 290
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 94/202 (46%), Gaps = 12/202 (5%)
Query: 19 ISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSI 78
I G +G VY + KK+ V + G L E I+ F HP++
Sbjct: 39 IGRGHFGCVYHGTLLDNDG----KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 94
Query: 79 VNVKEVVMDDHDSVYMVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNW 137
+++ + + S +V+ YM+H DL+ + + + ++ LQ+ +G+K+L
Sbjct: 95 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKK 154
Query: 138 VLHRDLKTSNLLLNNQGVLKICDFGMSR-----QYGSPLKPYTSLVVTLWYRAPELLLGA 192
+HRDL N +L+ + +K+ DFG++R ++ S + + W L
Sbjct: 155 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES--LQT 212
Query: 193 KKYSTAVDMWSVGCIMAELLAK 214
+K++T D+WS G ++ EL+ +
Sbjct: 213 QKFTTKSDVWSFGVLLWELMTR 234
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 94/204 (46%), Gaps = 16/204 (7%)
Query: 19 ISEGTYGIVYRAR--DKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHP 76
I G +G VY D KK+ V + G L E I+ F HP
Sbjct: 97 IGRGHFGCVYHGTLLDNDG------KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 150
Query: 77 SIVNVKEVVMDDHDSVYMVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHD 135
+++++ + + S +V+ YM+H DL+ + + + ++ LQ+ +G+K+L
Sbjct: 151 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLAS 210
Query: 136 NWVLHRDLKTSNLLLNNQGVLKICDFGMSR-----QYGSPLKPYTSLVVTLWYRAPELLL 190
+HRDL N +L+ + +K+ DFG++R ++ S + + W L
Sbjct: 211 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES--L 268
Query: 191 GAKKYSTAVDMWSVGCIMAELLAK 214
+K++T D+WS G ++ EL+ +
Sbjct: 269 QTQKFTTKSDVWSFGVLLWELMTR 292
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 105/225 (46%), Gaps = 12/225 (5%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILL 71
+FE L I G +G V + K + ++ A+K + K + L+ E ++L+
Sbjct: 75 DFEILKVIGRGAFGEVAVVKLKNADKVFAMK-----ILNKWEMLKRAETACFREERDVLV 129
Query: 72 SFDHPSIVNVKEVVMDDHDSVYMVMEY-MEHDLKWLMESMKQPFSTSEVKCLMLQLLEGV 130
+ D I + DD +++Y+VM+Y + DL L+ + + + +++ +
Sbjct: 130 NGDSKWITTLHYAFQDD-NNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAI 188
Query: 131 KYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVV-TLWYRAPELL 189
+H +HRD+K N+L++ G +++ DFG + +S+ V T Y +PE+L
Sbjct: 189 DSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEIL 248
Query: 190 L----GAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKI 230
G +Y D WS+G M E+L + F + V+ KI
Sbjct: 249 QAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKI 293
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 105/211 (49%), Gaps = 25/211 (11%)
Query: 19 ISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSI 78
+ +G +G + +++GE++ +K++ R ++ + F L+E+ ++ +HP++
Sbjct: 18 LGKGCFGQAIKVTHRETGEVMVMKELI----RFDEETQRTF----LKEVKVMRCLEHPNV 69
Query: 79 VNVKEVVMDDHDSVYMVMEYMEHD-LKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNW 137
+ V+ D + + EY++ L+ +++SM + S+ + G+ YLH
Sbjct: 70 LKFIGVLYKD-KRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMN 128
Query: 138 VLHRDLKTSNLLLNNQGVLKICDFGMSR----QYGSP----------LKPYTSLVVTLWY 183
++HRDL + N L+ + + DFG++R + P K ++V ++
Sbjct: 129 IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYW 188
Query: 184 RAPELLLGAKKYSTAVDMWSVGCIMAELLAK 214
APE++ G + Y VD++S G ++ E++ +
Sbjct: 189 MAPEMING-RSYDEKVDVFSFGIVLCEIIGR 218
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 95/237 (40%), Gaps = 57/237 (24%)
Query: 78 IVNVKEVVMDDHDSVYMVMEYMEHD--LKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHD 135
IV+V E + + +VME ++ + + Q F+ E +M + E ++YLH
Sbjct: 76 IVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS 135
Query: 136 NWVLHRDLKTSNLLLNNQ---GVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGA 192
+ HRD+K NLL ++ +LK+ DFG +++
Sbjct: 136 INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE-----------------------TTG 172
Query: 193 KKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGAK 252
+KY + DMWS+G IM LL P F GL+ PG K
Sbjct: 173 EKYDKSCDMWSLGVIMYILLCGYPPFYSNH---------------------GLAISPGMK 211
Query: 253 ANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWF 309
Y FP ++ +SE L+ LL +P +R+T+ + +NH W
Sbjct: 212 TRIRMGQYE-----FPNPEWSE---VSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 260
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 142/335 (42%), Gaps = 56/335 (16%)
Query: 16 LNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDH 75
+ K+ G + V+ A+D + VA+K V+ + E + I L+ +N +
Sbjct: 24 VRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAED---EIKLLQRVNDADNTKE 80
Query: 76 PSIVNVKEVVMDDHDS--------VYMVMEYMEHDLKWLMESMK-QPFSTSEVKCLMLQL 126
S+ + + DH + V MV E + +L L++ + + VK + QL
Sbjct: 81 DSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQL 140
Query: 127 LEGVKYLHDN-WVLHRDLKTSNLLLN------NQGVLKICDFGMSRQYGSPLKPYTSLVV 179
L G+ Y+H ++H D+K N+L+ N +KI D G + Y + YT+ +
Sbjct: 141 LLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYD---EHYTNSIQ 197
Query: 180 TLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLF------SGTTEVDQIDKIFKT 233
T YR+PE+LLGA + D+WS C++ EL+ LF S T + D I +I +
Sbjct: 198 TREYRSPEVLLGA-PWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIEL 256
Query: 234 LGTPTETIWPGLSELPG---AKANFAKQPYN---LLRKRFPAASFTGSPVLSESG----- 282
LG ELP + + +N LLR + VL+E
Sbjct: 257 LG-----------ELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKD 305
Query: 283 -----FDLLNRLLTYDPEKRITVDDALNHYWFHEV 312
D L+ +L DP KR +NH W +
Sbjct: 306 EAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDT 340
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 142/335 (42%), Gaps = 56/335 (16%)
Query: 16 LNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDH 75
+ K+ G + V+ A+D + VA+K V+ + E + I L+ +N +
Sbjct: 24 VRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAED---EIKLLQRVNDADNTKE 80
Query: 76 PSIVNVKEVVMDDHDS--------VYMVMEYMEHDLKWLMESMK-QPFSTSEVKCLMLQL 126
S+ + + DH + V MV E + +L L++ + + VK + QL
Sbjct: 81 DSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQL 140
Query: 127 LEGVKYLHDN-WVLHRDLKTSNLLLN------NQGVLKICDFGMSRQYGSPLKPYTSLVV 179
L G+ Y+H ++H D+K N+L+ N +KI D G + Y + YT+ +
Sbjct: 141 LLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYD---EHYTNSIQ 197
Query: 180 TLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLF------SGTTEVDQIDKIFKT 233
T YR+PE+LLGA + D+WS C++ EL+ LF S T + D I +I +
Sbjct: 198 TREYRSPEVLLGA-PWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIEL 256
Query: 234 LGTPTETIWPGLSELPG---AKANFAKQPYN---LLRKRFPAASFTGSPVLSESG----- 282
LG ELP + + +N LLR + VL+E
Sbjct: 257 LG-----------ELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKD 305
Query: 283 -----FDLLNRLLTYDPEKRITVDDALNHYWFHEV 312
D L+ +L DP KR +NH W +
Sbjct: 306 EAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDT 340
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 106/217 (48%), Gaps = 18/217 (8%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILL 71
E E +I +G +G+V++ R K +VA+K + + E + F RE+ I+
Sbjct: 20 EIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQ-EFQREVFIMS 78
Query: 72 SFDHPSIVNVKEVVMDDHDSVYMVMEYME-HDLKWLMESMKQPFSTSEVKCLMLQLLEGV 130
+ +HP+IV + ++ H+ MVME++ DL + P S LML + G+
Sbjct: 79 NLNHPNIVKLYGLM---HNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGI 135
Query: 131 KYLHDNW--VLHRDLKTSNLLL-----NNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWY 183
+Y+ + ++HRDL++ N+ L N K+ DF +S+Q + + L+ +
Sbjct: 136 EYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQ---SVHSVSGLLGNFQW 192
Query: 184 RAPELLLGAKK--YSTAVDMWSVGCIMAELLAKKPLF 218
APE +GA++ Y+ D +S I+ +L + F
Sbjct: 193 MAPE-TIGAEEESYTEKADTYSFAMILYTILTGEGPF 228
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 78/345 (22%), Positives = 126/345 (36%), Gaps = 94/345 (27%)
Query: 19 ISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLR---EINILLSFDH 75
I +G+YG+V A + ++ I A+K + N R+ + P R E+ ++ H
Sbjct: 34 IGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQIN------PKDVERIKTEVRLMKKLHH 87
Query: 76 PSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKC-------------- 121
P+I + EV +D + +VME L++ + S KC
Sbjct: 88 PNIARLYEV-YEDEQYICLVMELCHGG--HLLDKLNVFIDDSTGKCAMDVVKTQICPCPE 144
Query: 122 ----------------------------LMLQLLEGVKYLHDNWVLHRDLKTSNLLL--N 151
+M Q+ + YLH+ + HRD+K N L N
Sbjct: 145 CNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTN 204
Query: 152 NQGVLKICDFGMSRQY----GSPLKPYTSLVVTLWYRAPELL-LGAKKYSTAVDMWSVGC 206
+K+ DFG+S+++ T+ T ++ APE+L + Y D WS G
Sbjct: 205 KSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGV 264
Query: 207 IMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGAKANFAKQPYNLLRKR 266
++ LL F G + D I ++ K F YN
Sbjct: 265 LLHLLLMGAVPFPGVNDADTISQVLNK------------------KLCFENPNYN----- 301
Query: 267 FPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHE 311
VLS DLL+ LL + ++R AL H W +
Sbjct: 302 ----------VLSPLARDLLSNLLNRNVDERFDAMRALQHPWISQ 336
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 109/216 (50%), Gaps = 28/216 (12%)
Query: 19 ISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLR-EINILLSFDHPS 77
I G +G VYRA G+ VA+K + + ED + I ++R E + HP+
Sbjct: 15 IGIGGFGKVYRAF--WIGDEVAVKAARHD--PDEDISQT---IENVRQEAKLFAMLKHPN 67
Query: 78 IVNVKEVVMDDHDSVYMVMEYMEHD-LKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDN 136
I+ ++ V + + + + +VME+ L ++ + P + +Q+ G+ YLHD
Sbjct: 68 IIALRGVCLKEPN-LCLVMEFARGGPLNRVLSGKRIPPDI--LVNWAVQIARGMNYLHDE 124
Query: 137 WV---LHRDLKTSNLL---------LNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYR 184
+ +HRDLK+SN+L L+N+ +LKI DFG++R++ K S +
Sbjct: 125 AIVPIIHRDLKSSNILILQKVENGDLSNK-ILKITDFGLAREWHRTTK--MSAAGAYAWM 181
Query: 185 APELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSG 220
APE++ A +S D+WS G ++ ELL + F G
Sbjct: 182 APEVIR-ASMFSKGSDVWSYGVLLWELLTGEVPFRG 216
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 104/208 (50%), Gaps = 17/208 (8%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISS---LREIN 68
EF+K+ +S G +G VY+ GE KVK+ V KE E P ++ L E
Sbjct: 23 EFKKIKVLSSGAFGTVYKGLWIPEGE-----KVKIPVAIKE-LREATSPKANKEILDEAY 76
Query: 69 ILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHD--LKWLMESMKQPFSTSEVKCLMLQL 126
++ S D+P + + + + +V ++M+ M L ++ E K + + +Q+
Sbjct: 77 VMASVDNPHVCRLLGICLTS--TVQLIMQLMPFGCLLDYVREH-KDNIGSQYLLNWCVQI 133
Query: 127 LEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSL--VVTLWYR 184
+G+ YL D ++HRDL N+L+ +KI DFG+++ G+ K Y + V + +
Sbjct: 134 AKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 193
Query: 185 APELLLGAKKYSTAVDMWSVGCIMAELL 212
A E +L + Y+ D+WS G + EL+
Sbjct: 194 ALESIL-HRIYTHQSDVWSYGVTVWELM 220
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 95/371 (25%), Positives = 151/371 (40%), Gaps = 86/371 (23%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
+ + K+ G + V+ + D + + VA+K VK E ++L EI +L S
Sbjct: 39 YHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTE---------TALDEIRLLKS 89
Query: 73 FDH--PSIVNVKEVV--MDDHD-------SVYMVMEYMEHDL-KWLMESMKQPFSTSEVK 120
+ P+ N + VV +DD + MV E + H L KW+++S Q VK
Sbjct: 90 VRNSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVK 149
Query: 121 CLMLQLLEGVKYLHDNW-VLHRDLKTSNLLL--NNQGVLKICDFGMSRQYG--------- 168
++ Q+L+G+ YLH ++H D+K N+LL N Q + ++ Q
Sbjct: 150 KIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSA 209
Query: 169 -------------SPLKP----------------------YTSLVVTLWYRAPELLLGAK 193
+PL+P +T + T YR+ E+L+G+
Sbjct: 210 VSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGS- 268
Query: 194 KYSTAVDMWSVGCIMAELLAKKPLF---SG---TTEVDQIDKIFKTLG-TPTETIWPG-- 244
Y+T D+WS C+ EL LF SG T + D I I + LG P + I G
Sbjct: 269 GYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKY 328
Query: 245 LSELPGAKANFAK----QPYNLLRKRFPAASFTGSPVLSESGF-DLLNRLLTYDPEKRIT 299
E K + +P+ L ++ +GF D L +L PEKR T
Sbjct: 329 SKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEA---AGFTDFLLPMLELIPEKRAT 385
Query: 300 VDDALNHYWFH 310
+ L H W +
Sbjct: 386 AAECLRHPWLN 396
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 95/371 (25%), Positives = 151/371 (40%), Gaps = 86/371 (23%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
+ + K+ G + V+ + D + + VA+K VK E ++L EI +L S
Sbjct: 23 YHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTE---------TALDEIRLLKS 73
Query: 73 FDH--PSIVNVKEVV--MDDHD-------SVYMVMEYMEHDL-KWLMESMKQPFSTSEVK 120
+ P+ N + VV +DD + MV E + H L KW+++S Q VK
Sbjct: 74 VRNSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVK 133
Query: 121 CLMLQLLEGVKYLHDNW-VLHRDLKTSNLLL--NNQGVLKICDFGMSRQYG--------- 168
++ Q+L+G+ YLH ++H D+K N+LL N Q + ++ Q
Sbjct: 134 KIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSA 193
Query: 169 -------------SPLKP----------------------YTSLVVTLWYRAPELLLGAK 193
+PL+P +T + T YR+ E+L+G+
Sbjct: 194 VSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGS- 252
Query: 194 KYSTAVDMWSVGCIMAELLAKKPLF---SG---TTEVDQIDKIFKTLG-TPTETIWPG-- 244
Y+T D+WS C+ EL LF SG T + D I I + LG P + I G
Sbjct: 253 GYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKY 312
Query: 245 LSELPGAKANFAK----QPYNLLRKRFPAASFTGSPVLSESGF-DLLNRLLTYDPEKRIT 299
E K + +P+ L ++ +GF D L +L PEKR T
Sbjct: 313 SKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQE---EAAGFTDFLLPMLELIPEKRAT 369
Query: 300 VDDALNHYWFH 310
+ L H W +
Sbjct: 370 AAECLRHPWLN 380
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 84/181 (46%), Gaps = 23/181 (12%)
Query: 65 REINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEH-DLKWLMES-------------- 109
RE +L + H IV V D D + MV EYM+H DL + +
Sbjct: 66 REAELLTNLQHEHIVKFYGVC-GDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPR 124
Query: 110 -MKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYG 168
K S++ + Q+ G+ YL +HRDL T N L+ ++KI DFGMSR
Sbjct: 125 QAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVY 184
Query: 169 SP--LKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELL--AKKPLFS-GTTE 223
S + ++ + + PE ++ +K++T D+WS G I+ E+ K+P F TE
Sbjct: 185 STDYYRVGGHTMLPIRWMPPESIM-YRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTE 243
Query: 224 V 224
V
Sbjct: 244 V 244
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 99/206 (48%), Gaps = 29/206 (14%)
Query: 19 ISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPIS-SLREINILLSFDHPS 77
+ +G V+R R KK+G++ A+K + + + P+ +RE +L +H +
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVF--------NNISFLRPVDVQMREFEVLKKLNHKN 68
Query: 78 IVN---VKEVVMDDHDSVYMVMEYME-HDLKWLMESMKQPFSTSEVKCLML--QLLEGVK 131
IV ++E H ++ME+ L ++E + E + L++ ++ G+
Sbjct: 69 IVKLFAIEEETTTRHK--VLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMN 126
Query: 132 YLHDNWVLHRDLKTSNLLL----NNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPE 187
+L +N ++HR++K N++ + Q V K+ DFG +R+ + + SL T Y P+
Sbjct: 127 HLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDD-EQFVSLYGTEEYLHPD 185
Query: 188 LLLGA-------KKYSTAVDMWSVGC 206
+ A KKY VD+WS+G
Sbjct: 186 MYERAVLRKDHQKKYGATVDLWSIGV 211
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 99/204 (48%), Gaps = 16/204 (7%)
Query: 19 ISEGTYGIVYRARDKKSGEIV--ALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHP 76
I +G +G+VY GE + A +++ + E + LRE ++ +HP
Sbjct: 29 IGKGHFGVVYH------GEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHP 82
Query: 77 SIVNVKEVVMDDHDSVYMVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHD 135
+++ + +++ ++++ YM H DL + S ++ + ++ LQ+ G++YL +
Sbjct: 83 NVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAE 142
Query: 136 NWVLHRDLKTSNLLLNNQGVLKICDFGMS-----RQYGSPLKPYTSLVVTLWYRAPELLL 190
+HRDL N +L+ +K+ DFG++ R+Y S + + + W L
Sbjct: 143 QKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALES--L 200
Query: 191 GAKKYSTAVDMWSVGCIMAELLAK 214
+++T D+WS G ++ ELL +
Sbjct: 201 QTYRFTTKSDVWSFGVLLWELLTR 224
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 102/219 (46%), Gaps = 27/219 (12%)
Query: 9 SVFEFEKLNKISE---GTYGIVYRAR----DKKSGEIVALKKVKMNVGRKEDCLEYGFPI 61
++FE L IS+ G +G V R +G +VA+K+++ + ++ +
Sbjct: 6 TIFEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQ----- 60
Query: 62 SSLREINILLSFDHPSIVNVKEVVMD-DHDSVYMVMEYMEHD-LKWLMESMKQPFSTSEV 119
REI IL + IV + V S+ +VMEY+ L+ ++ + S +
Sbjct: 61 ---REIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRL 117
Query: 120 KCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMS------RQYGSPLKP 173
Q+ +G++YL +HRDL N+L+ ++ +KI DFG++ + Y +P
Sbjct: 118 LLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREP 177
Query: 174 YTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELL 212
S + WY APE L +S D+WS G ++ EL
Sbjct: 178 GQSPI--FWY-APE-SLSDNIFSRQSDVWSFGVVLYELF 212
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 102/219 (46%), Gaps = 27/219 (12%)
Query: 9 SVFEFEKLNKISE---GTYGIVYRAR----DKKSGEIVALKKVKMNVGRKEDCLEYGFPI 61
++FE L IS+ G +G V R +G +VA+K+++ + ++ +
Sbjct: 5 TIFEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQ----- 59
Query: 62 SSLREINILLSFDHPSIVNVKEVVMD-DHDSVYMVMEYMEHD-LKWLMESMKQPFSTSEV 119
REI IL + IV + V S+ +VMEY+ L+ ++ + S +
Sbjct: 60 ---REIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRL 116
Query: 120 KCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMS------RQYGSPLKP 173
Q+ +G++YL +HRDL N+L+ ++ +KI DFG++ + Y +P
Sbjct: 117 LLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREP 176
Query: 174 YTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELL 212
S + WY APE L +S D+WS G ++ EL
Sbjct: 177 GQSPI--FWY-APE-SLSDNIFSRQSDVWSFGVVLYELF 211
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 101/220 (45%), Gaps = 20/220 (9%)
Query: 19 ISEGTYGIVYRA---RDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDH 75
I EG +G V++ + VA+K K +C L+E + FDH
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCK-------NCTSDSVREKFLQEALTMRQFDH 70
Query: 76 PSIVNVKEVVMDDHDSVYMVMEYME-HDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLH 134
P IV + V+ ++ V+++ME +L+ ++ K + + QL + YL
Sbjct: 71 PHIVKLIGVITEN--PVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE 128
Query: 135 DNWVLHRDLKTSNLLLNNQGVLKICDFGMSR--QYGSPLKPYTSLVVTLWYRAPELLLGA 192
+HRD+ N+L+++ +K+ DFG+SR + + K + W APE +
Sbjct: 129 SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIKWM-APE-SINF 186
Query: 193 KKYSTAVDMWSVGCIMAELL--AKKPLFSGTTEVDQIDKI 230
+++++A D+W G M E+L KP F G D I +I
Sbjct: 187 RRFTSASDVWMFGVCMWEILMHGVKP-FQGVKNNDVIGRI 225
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 102/219 (46%), Gaps = 27/219 (12%)
Query: 9 SVFEFEKLNKISE---GTYGIVYRAR----DKKSGEIVALKKVKMNVGRKEDCLEYGFPI 61
++FE L IS+ G +G V R +G +VA+K+++ + ++ +
Sbjct: 18 TIFEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQ----- 72
Query: 62 SSLREINILLSFDHPSIVNVKEVVMD-DHDSVYMVMEYMEHD-LKWLMESMKQPFSTSEV 119
REI IL + IV + V S+ +VMEY+ L+ ++ + S +
Sbjct: 73 ---REIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRL 129
Query: 120 KCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMS------RQYGSPLKP 173
Q+ +G++YL +HRDL N+L+ ++ +KI DFG++ + Y +P
Sbjct: 130 LLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREP 189
Query: 174 YTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELL 212
S + WY APE L +S D+WS G ++ EL
Sbjct: 190 GQSPI--FWY-APE-SLSDNIFSRQSDVWSFGVVLYELF 224
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 101/219 (46%), Gaps = 18/219 (8%)
Query: 19 ISEGTYGIVYRA---RDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDH 75
I EG +G V++ + VA+K K +C L+E + FDH
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCK-------NCTSDSVREKFLQEALTMRQFDH 70
Query: 76 PSIVNVKEVVMDDHDSVYMVMEYME-HDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLH 134
P IV + V+ ++ V+++ME +L+ ++ K + + QL + YL
Sbjct: 71 PHIVKLIGVITEN--PVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE 128
Query: 135 DNWVLHRDLKTSNLLLNNQGVLKICDFGMSR-QYGSPLKPYTSLVVTLWYRAPELLLGAK 193
+HRD+ N+L+++ +K+ DFG+SR S + + + + APE + +
Sbjct: 129 SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE-SINFR 187
Query: 194 KYSTAVDMWSVGCIMAELL--AKKPLFSGTTEVDQIDKI 230
++++A D+W G M E+L KP F G D I +I
Sbjct: 188 RFTSASDVWMFGVCMWEILMHGVKP-FQGVKNNDVIGRI 225
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 101/219 (46%), Gaps = 18/219 (8%)
Query: 19 ISEGTYGIVYRA---RDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDH 75
I EG +G V++ + VA+K K +C L+E + FDH
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCK-------NCTSDSVREKFLQEALTMRQFDH 98
Query: 76 PSIVNVKEVVMDDHDSVYMVMEYME-HDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLH 134
P IV + V+ ++ V+++ME +L+ ++ K + + QL + YL
Sbjct: 99 PHIVKLIGVITEN--PVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE 156
Query: 135 DNWVLHRDLKTSNLLLNNQGVLKICDFGMSR-QYGSPLKPYTSLVVTLWYRAPELLLGAK 193
+HRD+ N+L+++ +K+ DFG+SR S + + + + APE + +
Sbjct: 157 SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE-SINFR 215
Query: 194 KYSTAVDMWSVGCIMAELL--AKKPLFSGTTEVDQIDKI 230
++++A D+W G M E+L KP F G D I +I
Sbjct: 216 RFTSASDVWMFGVCMWEILMHGVKP-FQGVKNNDVIGRI 253
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 102/225 (45%), Gaps = 12/225 (5%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILL 71
+FE + I G +G V + K + I A+K + K + L+ E ++L+
Sbjct: 75 DFEIIKVIGRGAFGEVAVVKMKNTERIYAMK-----ILNKWEMLKRAETACFREERDVLV 129
Query: 72 SFDHPSIVNVKEVVMDDHDSVYMVMEY-MEHDLKWLMESMKQPFSTSEVKCLMLQLLEGV 130
+ D I + D + +Y+VM+Y + DL L+ + + + +++ +
Sbjct: 130 NGDCQWITAL-HYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAI 188
Query: 131 KYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVV-TLWYRAPELL 189
+H +HRD+K N+LL+ G +++ DFG + +S+ V T Y +PE+L
Sbjct: 189 DSIHQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEIL 248
Query: 190 L----GAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKI 230
G KY D WS+G M E+L + F + V+ KI
Sbjct: 249 QAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKI 293
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 122/313 (38%), Gaps = 41/313 (13%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSL-REINILL 71
FE + ++ E G AR + ++ ++ + + K+ G S + RE+ +L
Sbjct: 10 FEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQP----GHIRSRVFREVEMLY 65
Query: 72 SFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVK 131
V ++ D Y+V E M ++ F+ E ++ + +
Sbjct: 66 QCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALD 125
Query: 132 YLHDNWVLHRDLKTSNLLL---NNQGVLKICDFGMSRQYGSPLKPYTSLVVT-------- 180
+LH+ + HRDLK N+L N +KICDFG+ G L S + T
Sbjct: 126 FLHNKGIAHRDLKPENILCEHPNQVSPVKICDFGLGS--GIKLNGDCSPISTPELLTPCG 183
Query: 181 -LWYRAPELLLG----AKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLG 235
Y APE++ A Y D+WS+G I+ LL+ P F G D
Sbjct: 184 SAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSD---------- 233
Query: 236 TPTETIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPE 295
W P + N + + FP + +S + DL+++LL D +
Sbjct: 234 ----CGWDRGEACPACQ-NMLFESIQEGKYEFPDKDWAH---ISCAAKDLISKLLVRDAK 285
Query: 296 KRITVDDALNHYW 308
+R++ L H W
Sbjct: 286 QRLSAAQVLQHPW 298
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 94/371 (25%), Positives = 147/371 (39%), Gaps = 90/371 (24%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
+ + K+ G + V+ D + VA+K VK E L+ + +RE +
Sbjct: 33 YHVIRKLGWGHFSTVWLCWDMQGKRFVAMKVVKSAQHYTETALDEIKLLKCVRESD---- 88
Query: 73 FDHPSIVNVKEVV--MDDHD-------SVYMVMEYMEHDL-KWLMESMKQPFSTSEVKCL 122
PS N VV +DD V MV E + H L KW+++S Q VK +
Sbjct: 89 ---PSDPNKDMVVQLIDDFKISGMNGIHVCMVFEVLGHHLLKWIIKSNYQGLPVRCVKSI 145
Query: 123 MLQLLEGVKYLHDNW-VLHRDLKTSNLLL--NNQGVLKICDFGMSRQYG----------- 168
+ Q+L+G+ YLH ++H D+K N+L+ ++ V ++ Q
Sbjct: 146 IRQVLQGLDYLHSKCKIIHTDIKPENILMCVDDAYVRRMAAEATEWQKAGAPPPSGSAVS 205
Query: 169 ---------SPLKP----------------------YTSLVVTLWYRAPELLLGAKKYST 197
+PL P +T + T YR+ E+L+GA YST
Sbjct: 206 TAPAADLLVNPLDPRNADKIRVKIADLGNACWVHKHFTEDIQTRQYRSIEVLIGA-GYST 264
Query: 198 AVDMWSVGCIMAELLAKKPLF---SG---TTEVDQIDKIFKTLGTPTETIWPGLSELPGA 251
D+WS C+ EL LF SG + + D I I + LG+ P L G
Sbjct: 265 PADIWSTACMAFELATGDYLFEPHSGEDYSRDEDHIAHIIELLGSI-----PRHFALSG- 318
Query: 252 KANFAKQPYNL------LRKRFPAASFT------GSPVLSESGF-DLLNRLLTYDPEKRI 298
++++ +N + K P + F G P + F D L +L PEKR
Sbjct: 319 --KYSREFFNRRGELRHITKLKPWSLFDVLVEKYGWPHEDAAQFTDFLIPMLEMVPEKRA 376
Query: 299 TVDDALNHYWF 309
+ + L H W
Sbjct: 377 SAGECLRHPWL 387
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 101/219 (46%), Gaps = 18/219 (8%)
Query: 19 ISEGTYGIVYRA---RDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDH 75
I EG +G V++ + VA+K K +C L+E + FDH
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCK-------NCTSDSVREKFLQEALTMRQFDH 67
Query: 76 PSIVNVKEVVMDDHDSVYMVMEYME-HDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLH 134
P IV + V+ ++ V+++ME +L+ ++ K + + QL + YL
Sbjct: 68 PHIVKLIGVITEN--PVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE 125
Query: 135 DNWVLHRDLKTSNLLLNNQGVLKICDFGMSR-QYGSPLKPYTSLVVTLWYRAPELLLGAK 193
+HRD+ N+L+++ +K+ DFG+SR S + + + + APE + +
Sbjct: 126 SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE-SINFR 184
Query: 194 KYSTAVDMWSVGCIMAELL--AKKPLFSGTTEVDQIDKI 230
++++A D+W G M E+L KP F G D I +I
Sbjct: 185 RFTSASDVWMFGVCMWEILMHGVKP-FQGVKNNDVIGRI 222
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 101/219 (46%), Gaps = 18/219 (8%)
Query: 19 ISEGTYGIVYRA---RDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDH 75
I EG +G V++ + VA+K K +C L+E + FDH
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCK-------NCTSDSVREKFLQEALTMRQFDH 75
Query: 76 PSIVNVKEVVMDDHDSVYMVMEYME-HDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLH 134
P IV + V+ ++ V+++ME +L+ ++ K + + QL + YL
Sbjct: 76 PHIVKLIGVITEN--PVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE 133
Query: 135 DNWVLHRDLKTSNLLLNNQGVLKICDFGMSR-QYGSPLKPYTSLVVTLWYRAPELLLGAK 193
+HRD+ N+L+++ +K+ DFG+SR S + + + + APE + +
Sbjct: 134 SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE-SINFR 192
Query: 194 KYSTAVDMWSVGCIMAELL--AKKPLFSGTTEVDQIDKI 230
++++A D+W G M E+L KP F G D I +I
Sbjct: 193 RFTSASDVWMFGVCMWEILMHGVKP-FQGVKNNDVIGRI 230
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 101/219 (46%), Gaps = 18/219 (8%)
Query: 19 ISEGTYGIVYRA---RDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDH 75
I EG +G V++ + VA+K K +C L+E + FDH
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCK-------NCTSDSVREKFLQEALTMRQFDH 70
Query: 76 PSIVNVKEVVMDDHDSVYMVMEYME-HDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLH 134
P IV + V+ ++ V+++ME +L+ ++ K + + QL + YL
Sbjct: 71 PHIVKLIGVITEN--PVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE 128
Query: 135 DNWVLHRDLKTSNLLLNNQGVLKICDFGMSR-QYGSPLKPYTSLVVTLWYRAPELLLGAK 193
+HRD+ N+L+++ +K+ DFG+SR S + + + + APE + +
Sbjct: 129 SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE-SINFR 187
Query: 194 KYSTAVDMWSVGCIMAELL--AKKPLFSGTTEVDQIDKI 230
++++A D+W G M E+L KP F G D I +I
Sbjct: 188 RFTSASDVWMFGVCMWEILMHGVKP-FQGVKNNDVIGRI 225
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 103/208 (49%), Gaps = 17/208 (8%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISS---LREIN 68
EF+K+ + G +G VY+ GE KVK+ V KE E P ++ L E
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWIPEGE-----KVKIPVAIKE-LREATSPKANKEILDEAY 73
Query: 69 ILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHD--LKWLMESMKQPFSTSEVKCLMLQL 126
++ S D+P + + + + +V ++M+ M L ++ E K + + +Q+
Sbjct: 74 VMASVDNPHVCRLLGICLTS--TVQLIMQLMPFGCLLDYVREH-KDNIGSQYLLNWCVQI 130
Query: 127 LEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSL--VVTLWYR 184
+G+ YL D ++HRDL N+L+ +KI DFG+++ G+ K Y + V + +
Sbjct: 131 AKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 190
Query: 185 APELLLGAKKYSTAVDMWSVGCIMAELL 212
A E +L + Y+ D+WS G + EL+
Sbjct: 191 ALESIL-HRIYTHQSDVWSYGVTVWELM 217
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 102/225 (45%), Gaps = 12/225 (5%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILL 71
+FE + I G +G V + K + I A+K + K + L+ E ++L+
Sbjct: 91 DFEIIKVIGRGAFGEVAVVKMKNTERIYAMK-----ILNKWEMLKRAETACFREERDVLV 145
Query: 72 SFDHPSIVNVKEVVMDDHDSVYMVMEY-MEHDLKWLMESMKQPFSTSEVKCLMLQLLEGV 130
+ D I + D + +Y+VM+Y + DL L+ + + + +++ +
Sbjct: 146 NGDCQWITAL-HYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAI 204
Query: 131 KYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVV-TLWYRAPELL 189
+H +HRD+K N+LL+ G +++ DFG + +S+ V T Y +PE+L
Sbjct: 205 DSIHQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEIL 264
Query: 190 L----GAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKI 230
G KY D WS+G M E+L + F + V+ KI
Sbjct: 265 QAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKI 309
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 101/219 (46%), Gaps = 18/219 (8%)
Query: 19 ISEGTYGIVYRA---RDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDH 75
I EG +G V++ + VA+K K +C L+E + FDH
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCK-------NCTSDSVREKFLQEALTMRQFDH 72
Query: 76 PSIVNVKEVVMDDHDSVYMVMEYME-HDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLH 134
P IV + V+ ++ V+++ME +L+ ++ K + + QL + YL
Sbjct: 73 PHIVKLIGVITEN--PVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE 130
Query: 135 DNWVLHRDLKTSNLLLNNQGVLKICDFGMSR-QYGSPLKPYTSLVVTLWYRAPELLLGAK 193
+HRD+ N+L+++ +K+ DFG+SR S + + + + APE + +
Sbjct: 131 SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE-SINFR 189
Query: 194 KYSTAVDMWSVGCIMAELL--AKKPLFSGTTEVDQIDKI 230
++++A D+W G M E+L KP F G D I +I
Sbjct: 190 RFTSASDVWMFGVCMWEILMHGVKP-FQGVKNNDVIGRI 227
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 101/219 (46%), Gaps = 18/219 (8%)
Query: 19 ISEGTYGIVYRA---RDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDH 75
I EG +G V++ + VA+K K +C L+E + FDH
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCK-------NCTSDSVREKFLQEALTMRQFDH 73
Query: 76 PSIVNVKEVVMDDHDSVYMVMEYME-HDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLH 134
P IV + V+ ++ V+++ME +L+ ++ K + + QL + YL
Sbjct: 74 PHIVKLIGVITEN--PVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE 131
Query: 135 DNWVLHRDLKTSNLLLNNQGVLKICDFGMSR-QYGSPLKPYTSLVVTLWYRAPELLLGAK 193
+HRD+ N+L+++ +K+ DFG+SR S + + + + APE + +
Sbjct: 132 SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE-SINFR 190
Query: 194 KYSTAVDMWSVGCIMAELL--AKKPLFSGTTEVDQIDKI 230
++++A D+W G M E+L KP F G D I +I
Sbjct: 191 RFTSASDVWMFGVCMWEILMHGVKP-FQGVKNNDVIGRI 228
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 103/208 (49%), Gaps = 17/208 (8%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISS---LREIN 68
EF+K+ + G +G VY+ GE KVK+ V KE E P ++ L E
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGE-----KVKIPVAIKE-LREATSPKANKEILDEAY 71
Query: 69 ILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHD--LKWLMESMKQPFSTSEVKCLMLQL 126
++ S D+P + + + + +V ++M+ M L ++ E K + + +Q+
Sbjct: 72 VMASVDNPHVCRLLGICLTS--TVQLIMQLMPFGCLLDYVREH-KDNIGSQYLLNWCVQI 128
Query: 127 LEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSL--VVTLWYR 184
+G+ YL D ++HRDL N+L+ +KI DFG+++ G+ K Y + V + +
Sbjct: 129 AKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 188
Query: 185 APELLLGAKKYSTAVDMWSVGCIMAELL 212
A E +L + Y+ D+WS G + EL+
Sbjct: 189 ALESIL-HRIYTHQSDVWSYGVTVWELM 215
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 86/180 (47%), Gaps = 10/180 (5%)
Query: 60 PISSLREINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHD--LKWLMESMKQPFSTS 117
P S L E I+ H +V + VV + +Y+V EYM L +L + +
Sbjct: 48 PESFLEEAQIMKKLKHDKLVQLYAVV--SEEPIYIVTEYMNKGSLLDFLKDGEGRALKLP 105
Query: 118 EVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQY-GSPLKPYTS 176
+ + Q+ G+ Y+ +HRDL+++N+L+ N + KI DFG++R +
Sbjct: 106 NLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQG 165
Query: 177 LVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKK----PLFSGTTEVDQIDKIFK 232
+ + APE L +++ D+WS G ++ EL+ K P + ++Q+++ ++
Sbjct: 166 AKFPIKWTAPEAALYG-RFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYR 224
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 101/219 (46%), Gaps = 18/219 (8%)
Query: 19 ISEGTYGIVYRA---RDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDH 75
I EG +G V++ + VA+K K +C L+E + FDH
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCK-------NCTSDSVREKFLQEALTMRQFDH 450
Query: 76 PSIVNVKEVVMDDHDSVYMVMEYME-HDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLH 134
P IV + V+ ++ V+++ME +L+ ++ K + + QL + YL
Sbjct: 451 PHIVKLIGVITEN--PVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE 508
Query: 135 DNWVLHRDLKTSNLLLNNQGVLKICDFGMSR-QYGSPLKPYTSLVVTLWYRAPELLLGAK 193
+HRD+ N+L+++ +K+ DFG+SR S + + + + APE + +
Sbjct: 509 SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE-SINFR 567
Query: 194 KYSTAVDMWSVGCIMAELL--AKKPLFSGTTEVDQIDKI 230
++++A D+W G M E+L KP F G D I +I
Sbjct: 568 RFTSASDVWMFGVCMWEILMHGVKP-FQGVKNNDVIGRI 605
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 103/208 (49%), Gaps = 17/208 (8%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISS---LREIN 68
EF+K+ + G +G VY+ GE KVK+ V KE E P ++ L E
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGE-----KVKIPVAIKE-LREATSPKANKEILDEAY 70
Query: 69 ILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHD--LKWLMESMKQPFSTSEVKCLMLQL 126
++ S D+P + + + + +V ++M+ M L ++ E K + + +Q+
Sbjct: 71 VMASVDNPHVCRLLGICLTS--TVQLIMQLMPFGXLLDYVREH-KDNIGSQYLLNWCVQI 127
Query: 127 LEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSL--VVTLWYR 184
+G+ YL D ++HRDL N+L+ +KI DFG+++ G+ K Y + V + +
Sbjct: 128 AKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 187
Query: 185 APELLLGAKKYSTAVDMWSVGCIMAELL 212
A E +L + Y+ D+WS G + EL+
Sbjct: 188 ALESIL-HRIYTHQSDVWSYGVTVWELM 214
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 103/208 (49%), Gaps = 17/208 (8%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISS---LREIN 68
EF+K+ + G +G VY+ GE KVK+ V KE E P ++ L E
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGE-----KVKIPVAIKE-LREATSPKANKEILDEAY 72
Query: 69 ILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHD--LKWLMESMKQPFSTSEVKCLMLQL 126
++ S D+P + + + + +V ++M+ M L ++ E K + + +Q+
Sbjct: 73 VMASVDNPHVCRLLGICLTS--TVQLIMQLMPFGCLLDYVREH-KDNIGSQYLLNWCVQI 129
Query: 127 LEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSL--VVTLWYR 184
+G+ YL D ++HRDL N+L+ +KI DFG+++ G+ K Y + V + +
Sbjct: 130 AKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 189
Query: 185 APELLLGAKKYSTAVDMWSVGCIMAELL 212
A E +L + Y+ D+WS G + EL+
Sbjct: 190 ALESIL-HRIYTHQSDVWSYGVTVWELM 216
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 103/208 (49%), Gaps = 17/208 (8%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISS---LREIN 68
EF+K+ + G +G VY+ GE KVK+ V KE E P ++ L E
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGE-----KVKIPVAIKE-LREATSPKANKEILDEAY 69
Query: 69 ILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHD--LKWLMESMKQPFSTSEVKCLMLQL 126
++ S D+P + + + + +V ++M+ M L ++ E K + + +Q+
Sbjct: 70 VMASVDNPHVCRLLGICLTS--TVQLIMQLMPFGCLLDYVREH-KDNIGSQYLLNWCVQI 126
Query: 127 LEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSL--VVTLWYR 184
+G+ YL D ++HRDL N+L+ +KI DFG+++ G+ K Y + V + +
Sbjct: 127 AKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 186
Query: 185 APELLLGAKKYSTAVDMWSVGCIMAELL 212
A E +L + Y+ D+WS G + EL+
Sbjct: 187 ALESIL-HRIYTHQSDVWSYGVTVWELM 213
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 103/208 (49%), Gaps = 17/208 (8%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISS---LREIN 68
EF+K+ + G +G VY+ GE KVK+ V KE E P ++ L E
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGE-----KVKIPVAIKE-LREATSPKANKEILDEAY 70
Query: 69 ILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHD--LKWLMESMKQPFSTSEVKCLMLQL 126
++ S D+P + + + + +V ++M+ M L ++ E K + + +Q+
Sbjct: 71 VMASVDNPHVCRLLGICLTS--TVQLIMQLMPFGCLLDYVREH-KDNIGSQYLLNWCVQI 127
Query: 127 LEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSL--VVTLWYR 184
+G+ YL D ++HRDL N+L+ +KI DFG+++ G+ K Y + V + +
Sbjct: 128 AKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 187
Query: 185 APELLLGAKKYSTAVDMWSVGCIMAELL 212
A E +L + Y+ D+WS G + EL+
Sbjct: 188 ALESIL-HRIYTHQSDVWSYGVTVWELM 214
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 87/182 (47%), Gaps = 14/182 (7%)
Query: 60 PISSLREINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHD--LKWLMESMKQPFSTS 117
P + L+E ++ H +V + VV + +Y+VMEYM L +L M +
Sbjct: 57 PEAFLQEAQVMKKLRHEKLVQLYAVV--SEEPIYIVMEYMSKGCLLDFLKGEMGKYLRLP 114
Query: 118 EVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTS- 176
++ + Q+ G+ Y+ +HRDL+ +N+L+ V K+ DFG++R YT+
Sbjct: 115 QLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIED--NEYTAR 172
Query: 177 --LVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKK----PLFSGTTEVDQIDKI 230
+ + APE L +++ D+WS G ++ EL K P +DQ+++
Sbjct: 173 QGAKFPIKWTAPEAALYG-RFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG 231
Query: 231 FK 232
++
Sbjct: 232 YR 233
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 126/294 (42%), Gaps = 48/294 (16%)
Query: 19 ISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSI 78
+ G +GIV+R + S + K VK+ G + ++ +EI+IL H +I
Sbjct: 13 LGRGEFGIVHRCVETSSKKTYMAKFVKVK-GTDQVLVK--------KEISILNIARHRNI 63
Query: 79 VNVKEVVMDDHDSVYMVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNW 137
+++ E + + + M+ E++ D+ + + + E+ + Q+ E +++LH +
Sbjct: 64 LHLHES-FESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHN 122
Query: 138 VLHRDLKTSNLLLNNQ--GVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGAKKY 195
+ H D++ N++ + +KI +FG +RQ P + L Y APE+
Sbjct: 123 IGHFDIRPENIIYQTRRSSTIKIIEFGQARQL-KPGDNFRLLFTAPEYYAPEVH-QHDVV 180
Query: 196 STAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGAKANF 255
STA DMWS+G ++ LL+ F T I+ I A+ F
Sbjct: 181 STATDMWSLGTLVYVLLSGINPFLAETNQQIIENIM------------------NAEYTF 222
Query: 256 AKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWF 309
++ + +S D ++RLL + + R+T +AL H W
Sbjct: 223 DEEAF---------------KEISIEAMDFVDRLLVKERKSRMTASEALQHPWL 261
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 102/208 (49%), Gaps = 17/208 (8%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISS---LREIN 68
EF+K+ + G +G VY+ GE KVK+ V KE E P ++ L E
Sbjct: 13 EFKKIKVLGSGAFGTVYKGLWIPEGE-----KVKIPVAIKE-LREATSPKANKEILDEAY 66
Query: 69 ILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHD--LKWLMESMKQPFSTSEVKCLMLQL 126
++ S D+P + + + + +V ++ + M L ++ E K + + +Q+
Sbjct: 67 VMASVDNPHVCRLLGICLTS--TVQLITQLMPFGCLLDYVREH-KDNIGSQYLLNWCVQI 123
Query: 127 LEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSL--VVTLWYR 184
EG+ YL D ++HRDL N+L+ +KI DFG+++ G+ K Y + V + +
Sbjct: 124 AEGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 183
Query: 185 APELLLGAKKYSTAVDMWSVGCIMAELL 212
A E +L + Y+ D+WS G + EL+
Sbjct: 184 ALESIL-HRIYTHQSDVWSYGVTVWELM 210
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 84/172 (48%), Gaps = 19/172 (11%)
Query: 65 REINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEH-DLK----------WLMESMKQP 113
RE +L + H IV V ++ D + MV EYM+H DL LM P
Sbjct: 64 REAELLTNLQHEHIVKFYGVCVEG-DPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPP 122
Query: 114 FSTSEVKCLML--QLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSP- 170
++ + L + Q+ G+ YL +HRDL T N L+ ++KI DFGMSR S
Sbjct: 123 TELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTD 182
Query: 171 -LKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELL--AKKPLFS 219
+ ++ + + PE ++ +K++T D+WS+G ++ E+ K+P +
Sbjct: 183 YYRVGGHTMLPIRWMPPESIM-YRKFTTESDVWSLGVVLWEIFTYGKQPWYQ 233
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 103/208 (49%), Gaps = 17/208 (8%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISS---LREIN 68
EF+K+ +S G +G VY+ GE KVK+ V KE E P ++ L E
Sbjct: 23 EFKKIKVLSSGAFGTVYKGLWIPEGE-----KVKIPVAIKE-LREATSPKANKEILDEAY 76
Query: 69 ILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHD--LKWLMESMKQPFSTSEVKCLMLQL 126
++ S D+P + + + + +V ++ + M L ++ E K + + +Q+
Sbjct: 77 VMASVDNPHVCRLLGICLTS--TVQLITQLMPFGCLLDYVREH-KDNIGSQYLLNWCVQI 133
Query: 127 LEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSL--VVTLWYR 184
+G+ YL D ++HRDL N+L+ +KI DFG+++ G+ K Y + V + +
Sbjct: 134 AKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 193
Query: 185 APELLLGAKKYSTAVDMWSVGCIMAELL 212
A E +L + Y+ D+WS G + EL+
Sbjct: 194 ALESIL-HRIYTHQSDVWSYGVTVWELM 220
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 103/208 (49%), Gaps = 17/208 (8%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISS---LREIN 68
EF+K+ +S G +G VY+ GE KVK+ V KE E P ++ L E
Sbjct: 16 EFKKIKVLSSGAFGTVYKGLWIPEGE-----KVKIPVAIKE-LREATSPKANKEILDEAY 69
Query: 69 ILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHD--LKWLMESMKQPFSTSEVKCLMLQL 126
++ S D+P + + + + +V ++ + M L ++ E K + + +Q+
Sbjct: 70 VMASVDNPHVCRLLGICLTS--TVQLITQLMPFGCLLDYVREH-KDNIGSQYLLNWCVQI 126
Query: 127 LEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSL--VVTLWYR 184
+G+ YL D ++HRDL N+L+ +KI DFG+++ G+ K Y + V + +
Sbjct: 127 AKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 186
Query: 185 APELLLGAKKYSTAVDMWSVGCIMAELL 212
A E +L + Y+ D+WS G + EL+
Sbjct: 187 ALESIL-HRIYTHQSDVWSYGVTVWELM 213
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 100/219 (45%), Gaps = 18/219 (8%)
Query: 19 ISEGTYGIVYRA---RDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDH 75
I EG +G V++ + VA+K K +C L+E + FDH
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCK-------NCTSDSVREKFLQEALTMRQFDH 450
Query: 76 PSIVNVKEVVMDDHDSVYMVMEYME-HDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLH 134
P IV + V+ ++ V+++ME +L+ ++ K + + QL + YL
Sbjct: 451 PHIVKLIGVITEN--PVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE 508
Query: 135 DNWVLHRDLKTSNLLLNNQGVLKICDFGMSR-QYGSPLKPYTSLVVTLWYRAPELLLGAK 193
+HRD+ N+L++ +K+ DFG+SR S + + + + APE + +
Sbjct: 509 SKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE-SINFR 567
Query: 194 KYSTAVDMWSVGCIMAELL--AKKPLFSGTTEVDQIDKI 230
++++A D+W G M E+L KP F G D I +I
Sbjct: 568 RFTSASDVWMFGVCMWEILMHGVKP-FQGVKNNDVIGRI 605
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 98/205 (47%), Gaps = 29/205 (14%)
Query: 19 ISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPIS-SLREINILLSFDHPS 77
+ +G V+R R KK+G++ A+K + + + P+ +RE +L +H +
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVF--------NNISFLRPVDVQMREFEVLKKLNHKN 68
Query: 78 IVN---VKEVVMDDHDSVYMVMEYME-HDLKWLMESMKQPFSTSEVKCLML--QLLEGVK 131
IV ++E H ++ME+ L ++E + E + L++ ++ G+
Sbjct: 69 IVKLFAIEEETTTRHK--VLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMN 126
Query: 132 YLHDNWVLHRDLKTSNLLL----NNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPE 187
+L +N ++HR++K N++ + Q V K+ DFG +R+ + + L T Y P+
Sbjct: 127 HLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDD-EQFVXLYGTEEYLHPD 185
Query: 188 LLLGA-------KKYSTAVDMWSVG 205
+ A KKY VD+WS+G
Sbjct: 186 MYERAVLRKDHQKKYGATVDLWSIG 210
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 102/208 (49%), Gaps = 17/208 (8%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISS---LREIN 68
EF+K+ + G +G VY+ GE KVK+ V KE E P ++ L E
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGE-----KVKIPVAIKE-LREATSPKANKEILDEAY 71
Query: 69 ILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHD--LKWLMESMKQPFSTSEVKCLMLQL 126
++ S D+P + + + + +V ++M+ M L ++ E K + + +Q+
Sbjct: 72 VMASVDNPHVCRLLGICLTS--TVQLIMQLMPFGCLLDYVREH-KDNIGSQYLLNWCVQI 128
Query: 127 LEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSL--VVTLWYR 184
+G+ YL D ++HRDL N+L+ +KI DFG ++ G+ K Y + V + +
Sbjct: 129 AKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWM 188
Query: 185 APELLLGAKKYSTAVDMWSVGCIMAELL 212
A E +L + Y+ D+WS G + EL+
Sbjct: 189 ALESIL-HRIYTHQSDVWSYGVTVWELM 215
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 102/208 (49%), Gaps = 17/208 (8%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISS---LREIN 68
EF+K+ + G +G VY+ GE KVK+ V KE E P ++ L E
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWIPEGE-----KVKIPVAIKE-LREATSPKANKEILDEAY 73
Query: 69 ILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHD--LKWLMESMKQPFSTSEVKCLMLQL 126
++ S D+P + + + + +V ++M+ M L ++ E K + + +Q+
Sbjct: 74 VMASVDNPHVCRLLGICLTS--TVQLIMQLMPFGCLLDYVREH-KDNIGSQYLLNWCVQI 130
Query: 127 LEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSL--VVTLWYR 184
+G+ YL D ++HRDL N+L+ +KI DFG ++ G+ K Y + V + +
Sbjct: 131 AKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWM 190
Query: 185 APELLLGAKKYSTAVDMWSVGCIMAELL 212
A E +L + Y+ D+WS G + EL+
Sbjct: 191 ALESIL-HRIYTHQSDVWSYGVTVWELM 217
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 100/219 (45%), Gaps = 18/219 (8%)
Query: 19 ISEGTYGIVYRA---RDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDH 75
I EG +G V++ + VA+K K +C L+E + FDH
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCK-------NCTSDSVREKFLQEALTMRQFDH 70
Query: 76 PSIVNVKEVVMDDHDSVYMVMEYME-HDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLH 134
P IV + V+ ++ V+++ME +L+ ++ K + + QL + YL
Sbjct: 71 PHIVKLIGVITEN--PVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE 128
Query: 135 DNWVLHRDLKTSNLLLNNQGVLKICDFGMSR-QYGSPLKPYTSLVVTLWYRAPELLLGAK 193
+HRD+ N+L++ +K+ DFG+SR S + + + + APE + +
Sbjct: 129 SKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE-SINFR 187
Query: 194 KYSTAVDMWSVGCIMAELL--AKKPLFSGTTEVDQIDKI 230
++++A D+W G M E+L KP F G D I +I
Sbjct: 188 RFTSASDVWMFGVCMWEILMHGVKP-FQGVKNNDVIGRI 225
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 60/107 (56%), Gaps = 7/107 (6%)
Query: 111 KQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQ-YGS 169
K+P + ++ Q+ G+++L +HRDL N+LL+ V+KICDFG++R Y +
Sbjct: 193 KEPITMEDLISYSFQVARGMEFLSSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKN 252
Query: 170 P---LKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA 213
P K T L L + APE + K YST D+WS G ++ E+ +
Sbjct: 253 PDYVRKGDTRL--PLKWMAPESIFD-KIYSTKSDVWSYGVLLWEIFS 296
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 83/186 (44%), Gaps = 23/186 (12%)
Query: 65 REINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEH-DLKWLMES-------------- 109
RE +L H IV V + + MV EYM H DL + S
Sbjct: 92 REAELLTMLQHQHIVRFFGVCTEGR-PLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDV 150
Query: 110 MKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGS 169
P ++ + Q+ G+ YL +HRDL T N L+ V+KI DFGMSR S
Sbjct: 151 APGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYS 210
Query: 170 P--LKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELL--AKKPLF--SGTTE 223
+ ++ + + PE +L +K++T D+WS G ++ E+ K+P + S T
Sbjct: 211 TDYYRVGGRTMLPIRWMPPESIL-YRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEA 269
Query: 224 VDQIDK 229
+D I +
Sbjct: 270 IDCITQ 275
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 102/208 (49%), Gaps = 17/208 (8%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISS---LREIN 68
EF+K+ + G +G VY+ GE KVK+ V KE E P ++ L E
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGE-----KVKIPVAIKE-LREATSPKANKEILDEAY 71
Query: 69 ILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHD--LKWLMESMKQPFSTSEVKCLMLQL 126
++ S D+P + + + + +V ++M+ M L ++ E K + + +Q+
Sbjct: 72 VMASVDNPHVCRLLGICLTS--TVQLIMQLMPFGCLLDYVREH-KDNIGSQYLLNWCVQI 128
Query: 127 LEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSL--VVTLWYR 184
+G+ YL D ++HRDL N+L+ +KI DFG ++ G+ K Y + V + +
Sbjct: 129 AKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWM 188
Query: 185 APELLLGAKKYSTAVDMWSVGCIMAELL 212
A E +L + Y+ D+WS G + EL+
Sbjct: 189 ALESIL-HRIYTHQSDVWSYGVTVWELM 215
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 104/221 (47%), Gaps = 26/221 (11%)
Query: 17 NKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLRE---INILLSF 73
+I G++G VY+ K G+ VA+K + + + + + LR+ +NILL
Sbjct: 14 QRIGSGSFGTVYKG--KWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 70
Query: 74 DHPSIVNVKEVVM-DDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKY 132
+ + + V + S+Y + +E F ++ + Q +G+ Y
Sbjct: 71 GYSTAPQLAIVTQWCEGSSLYHHLHIIE-----------TKFEMIKLIDIARQTAQGMDY 119
Query: 133 LHDNWVLHRDLKTSNLLLNNQGVLKICDFGM----SRQYGSPLKPYTSLVVTLWYRAPEL 188
LH ++HRDLK++N+ L+ +KI DFG+ SR GS + L ++ + APE+
Sbjct: 120 LHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGS--HQFEQLSGSILWMAPEV 177
Query: 189 LLGAKK--YSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQI 227
+ K YS D+++ G ++ EL+ + +S DQI
Sbjct: 178 IRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 218
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 104/221 (47%), Gaps = 26/221 (11%)
Query: 17 NKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLRE---INILLSF 73
+I G++G VY+ K G+ VA+K + + + + + LR+ +NILL
Sbjct: 30 QRIGSGSFGTVYKG--KWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 86
Query: 74 DHPSIVNVKEVVMDDHDSVYMVMEYME-HDLKWLMESMKQPFSTSEVKCLMLQLLEGVKY 132
+ + + +V ++ E L + + + F ++ + Q G+ Y
Sbjct: 87 GYSTAPQLA-----------IVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDY 135
Query: 133 LHDNWVLHRDLKTSNLLLNNQGVLKICDFGM----SRQYGSPLKPYTSLVVTLWYRAPEL 188
LH ++HRDLK++N+ L+ +KI DFG+ SR GS + L ++ + APE+
Sbjct: 136 LHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGS--HQFEQLSGSILWMAPEV 193
Query: 189 --LLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQI 227
+ + YS D+++ G ++ EL+ + +S DQI
Sbjct: 194 IRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 234
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 104/221 (47%), Gaps = 26/221 (11%)
Query: 17 NKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLRE---INILLSF 73
+I G++G VY+ K G+ VA+K + + + + + LR+ +NILL
Sbjct: 18 QRIGSGSFGTVYKG--KWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 74
Query: 74 DHPSIVNVKEVVMDDHDSVYMVMEYME-HDLKWLMESMKQPFSTSEVKCLMLQLLEGVKY 132
+ + + +V ++ E L + + + F ++ + Q G+ Y
Sbjct: 75 GYST-----------KPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDY 123
Query: 133 LHDNWVLHRDLKTSNLLLNNQGVLKICDFGM----SRQYGSPLKPYTSLVVTLWYRAPEL 188
LH ++HRDLK++N+ L+ +KI DFG+ SR GS + L ++ + APE+
Sbjct: 124 LHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGS--HQFEQLSGSILWMAPEV 181
Query: 189 --LLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQI 227
+ + YS D+++ G ++ EL+ + +S DQI
Sbjct: 182 IRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 222
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 93/184 (50%), Gaps = 15/184 (8%)
Query: 64 LREINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLM 123
L E N++ D+P IV + + + + +S +VME E L L + ++Q + +
Sbjct: 418 LAEANVMQQLDNPYIVRM--IGICEAESWMLVMEMAE--LGPLNKYLQQNRHVKDKNIIE 473
Query: 124 L--QLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTL 181
L Q+ G+KYL ++ +HRDL N+LL Q KI DFG+S+ + Y +
Sbjct: 474 LVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGK 533
Query: 182 W---YRAPELLLGAKKYSTAVDMWSVGCIMAELLA--KKPLFSG--TTEVDQIDKIFKTL 234
W + APE + K+S+ D+WS G +M E + +KP + G +EV + + + +
Sbjct: 534 WPVKWYAPE-CINYYKFSSKSDVWSFGVLMWEAFSYGQKP-YRGMKGSEVTAMLEKGERM 591
Query: 235 GTPT 238
G P
Sbjct: 592 GCPA 595
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 93/184 (50%), Gaps = 15/184 (8%)
Query: 64 LREINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLM 123
L E N++ D+P IV + + + + +S +VME E L L + ++Q + +
Sbjct: 419 LAEANVMQQLDNPYIVRM--IGICEAESWMLVMEMAE--LGPLNKYLQQNRHVKDKNIIE 474
Query: 124 L--QLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTL 181
L Q+ G+KYL ++ +HRDL N+LL Q KI DFG+S+ + Y +
Sbjct: 475 LVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGK 534
Query: 182 W---YRAPELLLGAKKYSTAVDMWSVGCIMAELLA--KKPLFSG--TTEVDQIDKIFKTL 234
W + APE + K+S+ D+WS G +M E + +KP + G +EV + + + +
Sbjct: 535 WPVKWYAPE-CINYYKFSSKSDVWSFGVLMWEAFSYGQKP-YRGMKGSEVTAMLEKGERM 592
Query: 235 GTPT 238
G P
Sbjct: 593 GCPA 596
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 93/213 (43%), Gaps = 27/213 (12%)
Query: 19 ISEGTYGIVYRARDKKSG--EIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHP 76
I EG +G V +AR KK G A+K++K K+D ++ + L ++ HP
Sbjct: 33 IGEGNFGQVLKARIKKDGLRMDAAIKRMK-EYASKDDHRDFAGELEVLCKLG-----HHP 86
Query: 77 SIVNVKEVVMDDHDSVYMVMEYMEHD--LKWLMES--------------MKQPFSTSEVK 120
+I+N+ + +Y+ +EY H L +L +S S+ ++
Sbjct: 87 NIINLLGAC-EHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLL 145
Query: 121 CLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVT 180
+ G+ YL +HRDL N+L+ V KI DFG+SR +K +
Sbjct: 146 HFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPV 205
Query: 181 LWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA 213
W L Y+T D+WS G ++ E+++
Sbjct: 206 RWMAIESLNYSV--YTTNSDVWSYGVLLWEIVS 236
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 59/99 (59%), Gaps = 1/99 (1%)
Query: 125 QLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYR 184
Q++ G+++LH +++RDLK N+LL++ G ++I D G++ + + T +
Sbjct: 297 QIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFM 356
Query: 185 APELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTE 223
APELLLG ++Y +VD +++G + E++A + F E
Sbjct: 357 APELLLG-EEYDFSVDYFALGVTLYEMIAARGPFRARGE 394
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 59/99 (59%), Gaps = 1/99 (1%)
Query: 125 QLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYR 184
Q++ G+++LH +++RDLK N+LL++ G ++I D G++ + + T +
Sbjct: 297 QIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFM 356
Query: 185 APELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTE 223
APELLLG ++Y +VD +++G + E++A + F E
Sbjct: 357 APELLLG-EEYDFSVDYFALGVTLYEMIAARGPFRARGE 394
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 59/99 (59%), Gaps = 1/99 (1%)
Query: 125 QLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYR 184
Q++ G+++LH +++RDLK N+LL++ G ++I D G++ + + T +
Sbjct: 297 QIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFM 356
Query: 185 APELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTE 223
APELLLG ++Y +VD +++G + E++A + F E
Sbjct: 357 APELLLG-EEYDFSVDYFALGVTLYEMIAARGPFRARGE 394
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 93/213 (43%), Gaps = 27/213 (12%)
Query: 19 ISEGTYGIVYRARDKKSG--EIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHP 76
I EG +G V +AR KK G A+K++K K+D ++ + L ++ HP
Sbjct: 23 IGEGNFGQVLKARIKKDGLRMDAAIKRMK-EYASKDDHRDFAGELEVLCKLG-----HHP 76
Query: 77 SIVNVKEVVMDDHDSVYMVMEYMEHD--LKWLMES--------------MKQPFSTSEVK 120
+I+N+ + +Y+ +EY H L +L +S S+ ++
Sbjct: 77 NIINLLGAC-EHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLL 135
Query: 121 CLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVT 180
+ G+ YL +HRDL N+L+ V KI DFG+SR +K +
Sbjct: 136 HFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPV 195
Query: 181 LWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA 213
W L Y+T D+WS G ++ E+++
Sbjct: 196 RWMAIESLNYSV--YTTNSDVWSYGVLLWEIVS 226
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 87/182 (47%), Gaps = 14/182 (7%)
Query: 60 PISSLREINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHD--LKWLMESMKQPFSTS 117
P + L+E ++ H +V + VV + +Y+V+EYM L +L M +
Sbjct: 57 PEAFLQEAQVMKKLRHEKLVQLYAVV--SEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLP 114
Query: 118 EVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTS- 176
++ + Q+ G+ Y+ +HRDL+ +N+L+ V K+ DFG++R YT+
Sbjct: 115 QLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIED--NEYTAR 172
Query: 177 --LVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKK----PLFSGTTEVDQIDKI 230
+ + APE L +++ D+WS G ++ EL K P +DQ+++
Sbjct: 173 QGAKFPIKWTAPEAALYG-RFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG 231
Query: 231 FK 232
++
Sbjct: 232 YR 233
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 114/252 (45%), Gaps = 32/252 (12%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
+ L +I G V++ ++K +I A+K V + + Y I+ L + L
Sbjct: 14 YSILKQIGSGGSSKVFQVLNEKK-QIYAIKYVNLEEADNQTLDSYRNEIAYLNK----LQ 68
Query: 73 FDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLK-WLMESMKQPFSTSEVKCLMLQLLEGVK 131
I+ + + + D +YMVME DL WL + K+ E K +LE V
Sbjct: 69 QHSDKIIRLYDYEITDQ-YIYMVMECGNIDLNSWLKK--KKSIDPWERKSYWKNMLEAVH 125
Query: 132 YLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVV------TLWYRA 185
+H + ++H DLK +N L+ + G+LK+ DFG++ Q ++P T+ VV T+ Y
Sbjct: 126 TIHQHGIVHSDLKPANFLIVD-GMLKLIDFGIANQ----MQPDTTSVVKDSQVGTVNYMP 180
Query: 186 PELL----------LGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLG 235
PE + K S D+WS+GCI+ + K F ++QI K+ +
Sbjct: 181 PEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQI--INQISKLHAIID 238
Query: 236 TPTETIWPGLSE 247
E +P + E
Sbjct: 239 PNHEIEFPDIPE 250
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 83/186 (44%), Gaps = 23/186 (12%)
Query: 65 REINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEH-DLKWLMES-------------- 109
RE +L H IV V + + MV EYM H DL + S
Sbjct: 63 REAELLTMLQHQHIVRFFGVCTEGR-PLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDV 121
Query: 110 MKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGS 169
P ++ + Q+ G+ YL +HRDL T N L+ V+KI DFGMSR S
Sbjct: 122 APGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYS 181
Query: 170 P--LKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELL--AKKPLF--SGTTE 223
+ ++ + + PE +L +K++T D+WS G ++ E+ K+P + S T
Sbjct: 182 TDYYRVGGRTMLPIRWMPPESIL-YRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEA 240
Query: 224 VDQIDK 229
+D I +
Sbjct: 241 IDCITQ 246
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 59/99 (59%), Gaps = 1/99 (1%)
Query: 125 QLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYR 184
Q++ G+++LH +++RDLK N+LL++ G ++I D G++ + + T +
Sbjct: 297 QIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFM 356
Query: 185 APELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTE 223
APELLLG ++Y +VD +++G + E++A + F E
Sbjct: 357 APELLLG-EEYDFSVDYFALGVTLYEMIAARGPFRARGE 394
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 114/252 (45%), Gaps = 32/252 (12%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
+ L +I G V++ ++K +I A+K V + + Y I+ L + L
Sbjct: 30 YSILKQIGSGGSSKVFQVLNEKK-QIYAIKYVNLEEADNQTLDSYRNEIAYLNK----LQ 84
Query: 73 FDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLK-WLMESMKQPFSTSEVKCLMLQLLEGVK 131
I+ + + + D +YMVME DL WL + K+ E K +LE V
Sbjct: 85 QHSDKIIRLYDYEITDQ-YIYMVMECGNIDLNSWLKK--KKSIDPWERKSYWKNMLEAVH 141
Query: 132 YLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVV------TLWYRA 185
+H + ++H DLK +N L+ + G+LK+ DFG++ Q ++P T+ VV T+ Y
Sbjct: 142 TIHQHGIVHSDLKPANFLIVD-GMLKLIDFGIANQ----MQPDTTSVVKDSQVGTVNYMP 196
Query: 186 PELL----------LGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLG 235
PE + K S D+WS+GCI+ + K F ++QI K+ +
Sbjct: 197 PEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQI--INQISKLHAIID 254
Query: 236 TPTETIWPGLSE 247
E +P + E
Sbjct: 255 PNHEIEFPDIPE 266
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 105/223 (47%), Gaps = 30/223 (13%)
Query: 17 NKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLRE---INILLSF 73
+I G++G VY+ K G+ VA+K + + + + + LR+ +NILL
Sbjct: 14 QRIGSGSFGTVYKG--KWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 70
Query: 74 DH---PSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGV 130
+ P + V + + S+Y + +E F ++ + Q +G+
Sbjct: 71 GYSTKPQLAIVTQWC--EGSSLYHHLHIIE-----------TKFEMIKLIDIARQTAQGM 117
Query: 131 KYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGM----SRQYGSPLKPYTSLVVTLWYRAP 186
YLH ++HRDLK++N+ L+ +KI DFG+ SR GS + L ++ + AP
Sbjct: 118 DYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGS--HQFEQLSGSILWMAP 175
Query: 187 ELLLGAKK--YSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQI 227
E++ K YS D+++ G ++ EL+ + +S DQI
Sbjct: 176 EVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 218
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 114/252 (45%), Gaps = 32/252 (12%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
+ L +I G V++ ++K +I A+K V + + Y I+ L + L
Sbjct: 58 YSILKQIGSGGSSKVFQVLNEKK-QIYAIKYVNLEEADNQTLDSYRNEIAYLNK----LQ 112
Query: 73 FDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLK-WLMESMKQPFSTSEVKCLMLQLLEGVK 131
I+ + + + D +YMVME DL WL + K+ E K +LE V
Sbjct: 113 QHSDKIIRLYDYEITDQ-YIYMVMECGNIDLNSWLKK--KKSIDPWERKSYWKNMLEAVH 169
Query: 132 YLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVV------TLWYRA 185
+H + ++H DLK +N L+ + G+LK+ DFG++ Q ++P T+ VV T+ Y
Sbjct: 170 TIHQHGIVHSDLKPANFLIVD-GMLKLIDFGIANQ----MQPDTTSVVKDSQVGTVNYMP 224
Query: 186 PELL----------LGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLG 235
PE + K S D+WS+GCI+ + K F ++QI K+ +
Sbjct: 225 PEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQI--INQISKLHAIID 282
Query: 236 TPTETIWPGLSE 247
E +P + E
Sbjct: 283 PNHEIEFPDIPE 294
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 105/223 (47%), Gaps = 30/223 (13%)
Query: 17 NKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLRE---INILLSF 73
+I G++G VY+ K G+ VA+K + + + + + LR+ +NILL
Sbjct: 34 QRIGSGSFGTVYKG--KWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 90
Query: 74 DH---PSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGV 130
+ P + V + + S+Y + +E F ++ + Q +G+
Sbjct: 91 GYSTKPQLAIVTQWC--EGSSLYHHLHIIE-----------TKFEMIKLIDIARQTAQGM 137
Query: 131 KYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGM----SRQYGSPLKPYTSLVVTLWYRAP 186
YLH ++HRDLK++N+ L+ +KI DFG+ SR GS + L ++ + AP
Sbjct: 138 DYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGS--HQFEQLSGSILWMAP 195
Query: 187 ELLLGAKK--YSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQI 227
E++ K YS D+++ G ++ EL+ + +S DQI
Sbjct: 196 EVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 238
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 85/180 (47%), Gaps = 10/180 (5%)
Query: 60 PISSLREINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHD--LKWLMESMKQPFSTS 117
P + L+E ++ H +V + VV + +Y+V+EYM L +L M +
Sbjct: 57 PEAFLQEAQVMKKLRHEKLVQLYAVV--SEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLP 114
Query: 118 EVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQY-GSPLKPYTS 176
++ + Q+ G+ Y+ +HRDL+ +N+L+ V K+ DFG++R +
Sbjct: 115 QLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQG 174
Query: 177 LVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKK----PLFSGTTEVDQIDKIFK 232
+ + APE L +++ D+WS G ++ EL K P +DQ+++ ++
Sbjct: 175 AKFPIKWTAPEAALYG-RFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYR 233
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 113/249 (45%), Gaps = 32/249 (12%)
Query: 16 LNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDH 75
L +I G V++ ++K +I A+K V + + Y I+ L + L
Sbjct: 61 LKQIGSGGSSKVFQVLNEKK-QIYAIKYVNLEEADNQTLDSYRNEIAYLNK----LQQHS 115
Query: 76 PSIVNVKEVVMDDHDSVYMVMEYMEHDLK-WLMESMKQPFSTSEVKCLMLQLLEGVKYLH 134
I+ + + + D +YMVME DL WL + K+ E K +LE V +H
Sbjct: 116 DKIIRLYDYEITDQ-YIYMVMECGNIDLNSWLKK--KKSIDPWERKSYWKNMLEAVHTIH 172
Query: 135 DNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVV------TLWYRAPEL 188
+ ++H DLK +N L+ + G+LK+ DFG++ Q ++P T+ VV T+ Y PE
Sbjct: 173 QHGIVHSDLKPANFLIVD-GMLKLIDFGIANQ----MQPDTTSVVKDSQVGTVNYMPPEA 227
Query: 189 L----------LGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPT 238
+ K S D+WS+GCI+ + K F ++QI K+ +
Sbjct: 228 IKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQI--INQISKLHAIIDPNH 285
Query: 239 ETIWPGLSE 247
E +P + E
Sbjct: 286 EIEFPDIPE 294
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 104/221 (47%), Gaps = 26/221 (11%)
Query: 17 NKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLRE---INILLSF 73
+I G++G VY+ K G+ VA+K + + + + + LR+ +NILL
Sbjct: 30 QRIGSGSFGTVYKG--KWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 86
Query: 74 DHPSIVNVKEVVMDDHDSVYMVMEYME-HDLKWLMESMKQPFSTSEVKCLMLQLLEGVKY 132
+ + + +V ++ E L + + + F ++ + Q G+ Y
Sbjct: 87 GYST-----------KPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDY 135
Query: 133 LHDNWVLHRDLKTSNLLLNNQGVLKICDFGM----SRQYGSPLKPYTSLVVTLWYRAPEL 188
LH ++HRDLK++N+ L+ +KI DFG+ SR GS + L ++ + APE+
Sbjct: 136 LHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGS--HQFEQLSGSILWMAPEV 193
Query: 189 --LLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQI 227
+ + YS D+++ G ++ EL+ + +S DQI
Sbjct: 194 IRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 234
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 105/223 (47%), Gaps = 30/223 (13%)
Query: 17 NKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLRE---INILLSF 73
+I G++G VY+ K G+ VA+K + + + + + LR+ +NILL
Sbjct: 14 QRIGSGSFGTVYKG--KWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 70
Query: 74 DH---PSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGV 130
+ P + V + + S+Y + +E F ++ + Q +G+
Sbjct: 71 GYSTKPQLAIVTQWC--EGSSLYHHLHIIE-----------TKFEMIKLIDIARQTAQGM 117
Query: 131 KYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGM----SRQYGSPLKPYTSLVVTLWYRAP 186
YLH ++HRDLK++N+ L+ +KI DFG+ SR GS + L ++ + AP
Sbjct: 118 DYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGS--HQFEQLSGSILWMAP 175
Query: 187 ELLLGAKK--YSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQI 227
E++ K YS D+++ G ++ EL+ + +S DQI
Sbjct: 176 EVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 218
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 83/186 (44%), Gaps = 23/186 (12%)
Query: 65 REINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEH-DLKWLMES-------------- 109
RE +L H IV V + + MV EYM H DL + S
Sbjct: 69 REAELLTMLQHQHIVRFFGVCTEGR-PLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDV 127
Query: 110 MKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGS 169
P ++ + Q+ G+ YL +HRDL T N L+ V+KI DFGMSR S
Sbjct: 128 APGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYS 187
Query: 170 P--LKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELL--AKKPLF--SGTTE 223
+ ++ + + PE +L +K++T D+WS G ++ E+ K+P + S T
Sbjct: 188 TDYYRVGGRTMLPIRWMPPESIL-YRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEA 246
Query: 224 VDQIDK 229
+D I +
Sbjct: 247 IDCITQ 252
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 114/252 (45%), Gaps = 32/252 (12%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
+ L +I G V++ ++K +I A+K V + + Y I+ L + L
Sbjct: 10 YSILKQIGSGGSSKVFQVLNEKK-QIYAIKYVNLEEADNQTLDSYRNEIAYLNK----LQ 64
Query: 73 FDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLK-WLMESMKQPFSTSEVKCLMLQLLEGVK 131
I+ + + + D +YMVME DL WL + K+ E K +LE V
Sbjct: 65 QHSDKIIRLYDYEITDQ-YIYMVMECGNIDLNSWLKK--KKSIDPWERKSYWKNMLEAVH 121
Query: 132 YLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVV------TLWYRA 185
+H + ++H DLK +N L+ + G+LK+ DFG++ Q ++P T+ VV T+ Y
Sbjct: 122 TIHQHGIVHSDLKPANFLIVD-GMLKLIDFGIANQ----MQPDTTSVVKDSQVGTVNYMP 176
Query: 186 PELL----------LGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLG 235
PE + K S D+WS+GCI+ + K F ++QI K+ +
Sbjct: 177 PEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQI--INQISKLHAIID 234
Query: 236 TPTETIWPGLSE 247
E +P + E
Sbjct: 235 PNHEIEFPDIPE 246
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 99/209 (47%), Gaps = 17/209 (8%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIV----ALKKVKMNVGRKEDCLEYGFPISSLREI 67
E +++ + G +G VY+ GE V A+K + G K + + + E
Sbjct: 16 ELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKAN-------VEFMDEA 68
Query: 68 NILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHD--LKWLMESMKQPFSTSEVKCLMLQ 125
I+ S DHP +V + V + ++ +V + M H L+++ E K + + +Q
Sbjct: 69 LIMASMDHPHLVRLLGVCLSP--TIQLVTQLMPHGCLLEYVHEH-KDNIGSQLLLNWCVQ 125
Query: 126 LLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRA 185
+ +G+ YL + ++HRDL N+L+ + +KI DFG++R K Y + + +
Sbjct: 126 IAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKW 185
Query: 186 PEL-LLGAKKYSTAVDMWSVGCIMAELLA 213
L + +K++ D+WS G + EL+
Sbjct: 186 MALECIHYRKFTHQSDVWSYGVTIWELMT 214
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 114/252 (45%), Gaps = 32/252 (12%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
+ L +I G V++ ++K +I A+K V + + Y I+ L + L
Sbjct: 11 YSILKQIGSGGSSKVFQVLNEKK-QIYAIKYVNLEEADNQTLDSYRNEIAYLNK----LQ 65
Query: 73 FDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLK-WLMESMKQPFSTSEVKCLMLQLLEGVK 131
I+ + + + D +YMVME DL WL + K+ E K +LE V
Sbjct: 66 QHSDKIIRLYDYEITDQ-YIYMVMECGNIDLNSWLKK--KKSIDPWERKSYWKNMLEAVH 122
Query: 132 YLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVV------TLWYRA 185
+H + ++H DLK +N L+ + G+LK+ DFG++ Q ++P T+ VV T+ Y
Sbjct: 123 TIHQHGIVHSDLKPANFLIVD-GMLKLIDFGIANQ----MQPDTTSVVKDSQVGTVNYMP 177
Query: 186 PELL----------LGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLG 235
PE + K S D+WS+GCI+ + K F ++QI K+ +
Sbjct: 178 PEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQI--INQISKLHAIID 235
Query: 236 TPTETIWPGLSE 247
E +P + E
Sbjct: 236 PNHEIEFPDIPE 247
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 105/223 (47%), Gaps = 30/223 (13%)
Query: 17 NKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLRE---INILLSF 73
+I G++G VY+ K G+ VA+K + + + + + LR+ +NILL
Sbjct: 42 QRIGSGSFGTVYKG--KWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 98
Query: 74 DH---PSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGV 130
+ P + V + + S+Y + +E F ++ + Q +G+
Sbjct: 99 GYSTKPQLAIVTQWC--EGSSLYHHLHIIE-----------TKFEMIKLIDIARQTAQGM 145
Query: 131 KYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGM----SRQYGSPLKPYTSLVVTLWYRAP 186
YLH ++HRDLK++N+ L+ +KI DFG+ SR GS + L ++ + AP
Sbjct: 146 DYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGS--HQFEQLSGSILWMAP 203
Query: 187 ELLLGAKK--YSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQI 227
E++ K YS D+++ G ++ EL+ + +S DQI
Sbjct: 204 EVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 246
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 99/209 (47%), Gaps = 17/209 (8%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIV----ALKKVKMNVGRKEDCLEYGFPISSLREI 67
E +++ + G +G VY+ GE V A+K + G K + + + E
Sbjct: 39 ELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKAN-------VEFMDEA 91
Query: 68 NILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHD--LKWLMESMKQPFSTSEVKCLMLQ 125
I+ S DHP +V + V + ++ +V + M H L+++ E K + + +Q
Sbjct: 92 LIMASMDHPHLVRLLGVCLSP--TIQLVTQLMPHGCLLEYVHEH-KDNIGSQLLLNWCVQ 148
Query: 126 LLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRA 185
+ +G+ YL + ++HRDL N+L+ + +KI DFG++R K Y + + +
Sbjct: 149 IAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKW 208
Query: 186 PEL-LLGAKKYSTAVDMWSVGCIMAELLA 213
L + +K++ D+WS G + EL+
Sbjct: 209 MALECIHYRKFTHQSDVWSYGVTIWELMT 237
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 93/184 (50%), Gaps = 15/184 (8%)
Query: 64 LREINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLM 123
L E N++ D+P IV + + + + +S +VME E L L + ++Q + +
Sbjct: 60 LAEANVMQQLDNPYIVRM--IGICEAESWMLVMEMAE--LGPLNKYLQQNRHVKDKNIIE 115
Query: 124 L--QLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTL 181
L Q+ G+KYL ++ +HRDL N+LL Q KI DFG+S+ + Y +
Sbjct: 116 LVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGK 175
Query: 182 W---YRAPELLLGAKKYSTAVDMWSVGCIMAELLA--KKPLFSGT--TEVDQIDKIFKTL 234
W + APE + K+S+ D+WS G +M E + +KP + G +EV + + + +
Sbjct: 176 WPVKWYAPE-CINYYKFSSKSDVWSFGVLMWEAFSYGQKP-YRGMKGSEVTAMLEKGERM 233
Query: 235 GTPT 238
G P
Sbjct: 234 GCPA 237
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 105/223 (47%), Gaps = 30/223 (13%)
Query: 17 NKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLRE---INILLSF 73
+I G++G VY+ K G+ VA+K + + + + + LR+ +NILL
Sbjct: 19 QRIGSGSFGTVYKG--KWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 75
Query: 74 DH---PSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGV 130
+ P + V + + S+Y + +E F ++ + Q +G+
Sbjct: 76 GYSTKPQLAIVTQWC--EGSSLYHHLHIIE-----------TKFEMIKLIDIARQTAQGM 122
Query: 131 KYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGM----SRQYGSPLKPYTSLVVTLWYRAP 186
YLH ++HRDLK++N+ L+ +KI DFG+ SR GS + L ++ + AP
Sbjct: 123 DYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGS--HQFEQLSGSILWMAP 180
Query: 187 ELLLGAKK--YSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQI 227
E++ K YS D+++ G ++ EL+ + +S DQI
Sbjct: 181 EVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 223
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 105/223 (47%), Gaps = 30/223 (13%)
Query: 17 NKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLRE---INILLSF 73
+I G++G VY+ K G+ VA+K + + + + + LR+ +NILL
Sbjct: 41 QRIGSGSFGTVYKG--KWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 97
Query: 74 DH---PSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGV 130
+ P + V + + S+Y + +E F ++ + Q +G+
Sbjct: 98 GYSTKPQLAIVTQWC--EGSSLYHHLHIIE-----------TKFEMIKLIDIARQTAQGM 144
Query: 131 KYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGM----SRQYGSPLKPYTSLVVTLWYRAP 186
YLH ++HRDLK++N+ L+ +KI DFG+ SR GS + L ++ + AP
Sbjct: 145 DYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGS--HQFEQLSGSILWMAP 202
Query: 187 ELLLGAKK--YSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQI 227
E++ K YS D+++ G ++ EL+ + +S DQI
Sbjct: 203 EVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 245
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 105/223 (47%), Gaps = 30/223 (13%)
Query: 17 NKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLRE---INILLSF 73
+I G++G VY+ K G+ VA+K + + + + + LR+ +NILL
Sbjct: 42 QRIGSGSFGTVYKG--KWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 98
Query: 74 DH---PSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGV 130
+ P + V + + S+Y + +E F ++ + Q +G+
Sbjct: 99 GYSTKPQLAIVTQWC--EGSSLYHHLHIIE-----------TKFEMIKLIDIARQTAQGM 145
Query: 131 KYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGM----SRQYGSPLKPYTSLVVTLWYRAP 186
YLH ++HRDLK++N+ L+ +KI DFG+ SR GS + L ++ + AP
Sbjct: 146 DYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGS--HQFEQLSGSILWMAP 203
Query: 187 ELLLGAKK--YSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQI 227
E++ K YS D+++ G ++ EL+ + +S DQI
Sbjct: 204 EVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 246
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 102/208 (49%), Gaps = 17/208 (8%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISS---LREIN 68
EF+K+ + G +G VY+ GE KVK+ V KE E P ++ L E
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGE-----KVKIPVAIKE-LREATSPKANKEILDEAY 72
Query: 69 ILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHD--LKWLMESMKQPFSTSEVKCLMLQL 126
++ S D+P + + + + +V ++ + M L ++ E K + + +Q+
Sbjct: 73 VMASVDNPHVCRLLGICLTS--TVQLITQLMPFGCLLDYVREH-KDNIGSQYLLNWCVQI 129
Query: 127 LEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSL--VVTLWYR 184
+G+ YL D ++HRDL N+L+ +KI DFG+++ G+ K Y + V + +
Sbjct: 130 AKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 189
Query: 185 APELLLGAKKYSTAVDMWSVGCIMAELL 212
A E +L + Y+ D+WS G + EL+
Sbjct: 190 ALESIL-HRIYTHQSDVWSYGVTVWELM 216
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 102/208 (49%), Gaps = 17/208 (8%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISS---LREIN 68
EF+K+ + G +G VY+ GE KVK+ V KE E P ++ L E
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGE-----KVKIPVAIKE-LREATSPKANKEILDEAY 71
Query: 69 ILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHD--LKWLMESMKQPFSTSEVKCLMLQL 126
++ S D+P + + + + +V ++ + M L ++ E K + + +Q+
Sbjct: 72 VMASVDNPHVCRLLGICLTS--TVQLITQLMPFGCLLDYVREH-KDNIGSQYLLNWCVQI 128
Query: 127 LEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSL--VVTLWYR 184
+G+ YL D ++HRDL N+L+ +KI DFG+++ G+ K Y + V + +
Sbjct: 129 AKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 188
Query: 185 APELLLGAKKYSTAVDMWSVGCIMAELL 212
A E +L + Y+ D+WS G + EL+
Sbjct: 189 ALESIL-HRIYTHQSDVWSYGVTVWELM 215
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 102/208 (49%), Gaps = 17/208 (8%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISS---LREIN 68
EF+K+ + G +G VY+ GE KVK+ V KE E P ++ L E
Sbjct: 22 EFKKIKVLGSGAFGTVYKGLWIPEGE-----KVKIPVAIKE-LREATSPKANKEILDEAY 75
Query: 69 ILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHD--LKWLMESMKQPFSTSEVKCLMLQL 126
++ S D+P + + + + +V ++ + M L ++ E K + + +Q+
Sbjct: 76 VMASVDNPHVCRLLGICLTS--TVQLITQLMPFGCLLDYVREH-KDNIGSQYLLNWCVQI 132
Query: 127 LEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSL--VVTLWYR 184
+G+ YL D ++HRDL N+L+ +KI DFG+++ G+ K Y + V + +
Sbjct: 133 AKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 192
Query: 185 APELLLGAKKYSTAVDMWSVGCIMAELL 212
A E +L + Y+ D+WS G + EL+
Sbjct: 193 ALESIL-HRIYTHQSDVWSYGVTVWELM 219
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 105/223 (47%), Gaps = 30/223 (13%)
Query: 17 NKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLRE---INILLSF 73
+I G++G VY+ K G+ VA+K + + + + + LR+ +NILL
Sbjct: 19 QRIGSGSFGTVYKG--KWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 75
Query: 74 DH---PSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGV 130
+ P + V + + S+Y + +E F ++ + Q +G+
Sbjct: 76 GYSTKPQLAIVTQWC--EGSSLYHHLHIIE-----------TKFEMIKLIDIARQTAQGM 122
Query: 131 KYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGM----SRQYGSPLKPYTSLVVTLWYRAP 186
YLH ++HRDLK++N+ L+ +KI DFG+ SR GS + L ++ + AP
Sbjct: 123 DYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGS--HQFEQLSGSILWMAP 180
Query: 187 ELLLGAKK--YSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQI 227
E++ K YS D+++ G ++ EL+ + +S DQI
Sbjct: 181 EVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 223
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 105/223 (47%), Gaps = 30/223 (13%)
Query: 17 NKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLRE---INILLSF 73
+I G++G VY+ K G+ VA+K + + + + + LR+ +NILL
Sbjct: 16 QRIGSGSFGTVYKG--KWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 72
Query: 74 DH---PSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGV 130
+ P + V + + S+Y + +E F ++ + Q +G+
Sbjct: 73 GYSTKPQLAIVTQWC--EGSSLYHHLHIIE-----------TKFEMIKLIDIARQTAQGM 119
Query: 131 KYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGM----SRQYGSPLKPYTSLVVTLWYRAP 186
YLH ++HRDLK++N+ L+ +KI DFG+ SR GS + L ++ + AP
Sbjct: 120 DYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGS--HQFEQLSGSILWMAP 177
Query: 187 ELLLGAKK--YSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQI 227
E++ K YS D+++ G ++ EL+ + +S DQI
Sbjct: 178 EVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 220
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 102/209 (48%), Gaps = 17/209 (8%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISS---LREIN 68
EF+K+ + G +G VY+ GE KVK+ V KE E P ++ L E
Sbjct: 41 EFKKIKVLGSGAFGTVYKGLWIPEGE-----KVKIPVAIKE-LREATSPKANKEILDEAY 94
Query: 69 ILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHD--LKWLMESMKQPFSTSEVKCLMLQL 126
++ S D+P + + + + +V ++ + M L ++ E K + + +Q+
Sbjct: 95 VMASVDNPHVCRLLGICLTS--TVQLITQLMPFGCLLDYVREH-KDNIGSQYLLNWCVQI 151
Query: 127 LEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSL--VVTLWYR 184
+G+ YL D ++HRDL N+L+ +KI DFG+++ G+ K Y + V + +
Sbjct: 152 AKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 211
Query: 185 APELLLGAKKYSTAVDMWSVGCIMAELLA 213
A E +L + Y+ D+WS G + EL+
Sbjct: 212 ALESIL-HRIYTHQSDVWSYGVTVWELMT 239
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 102/208 (49%), Gaps = 17/208 (8%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISS---LREIN 68
EF+K+ + G +G VY+ GE KVK+ V KE E P ++ L E
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGE-----KVKIPVAIKE-LREATSPKANKEILDEAY 72
Query: 69 ILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHD--LKWLMESMKQPFSTSEVKCLMLQL 126
++ S D+P + + + + +V ++ + M L ++ E K + + +Q+
Sbjct: 73 VMASVDNPHVCRLLGICLTS--TVQLITQLMPFGCLLDYVREH-KDNIGSQYLLNWCVQI 129
Query: 127 LEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSL--VVTLWYR 184
+G+ YL D ++HRDL N+L+ +KI DFG+++ G+ K Y + V + +
Sbjct: 130 AKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 189
Query: 185 APELLLGAKKYSTAVDMWSVGCIMAELL 212
A E +L + Y+ D+WS G + EL+
Sbjct: 190 ALESIL-HRIYTHQSDVWSYGVTVWELM 216
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 102/208 (49%), Gaps = 17/208 (8%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISS---LREIN 68
EF+K+ + G +G VY+ GE KVK+ V KE E P ++ L E
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGE-----KVKIPVAIKE-LREATSPKANKEILDEAY 69
Query: 69 ILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHD--LKWLMESMKQPFSTSEVKCLMLQL 126
++ S D+P + + + + +V ++ + M L ++ E K + + +Q+
Sbjct: 70 VMASVDNPHVCRLLGICLTS--TVQLITQLMPFGXLLDYVREH-KDNIGSQYLLNWCVQI 126
Query: 127 LEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSL--VVTLWYR 184
+G+ YL D ++HRDL N+L+ +KI DFG+++ G+ K Y + V + +
Sbjct: 127 AKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 186
Query: 185 APELLLGAKKYSTAVDMWSVGCIMAELL 212
A E +L + Y+ D+WS G + EL+
Sbjct: 187 ALESIL-HRIYTHQSDVWSYGVTVWELM 213
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 86/182 (47%), Gaps = 14/182 (7%)
Query: 60 PISSLREINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHD--LKWLMESMKQPFSTS 117
P + L+E ++ H +V + VV + +Y+V EYM L +L M +
Sbjct: 57 PEAFLQEAQVMKKLRHEKLVQLYAVV--SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLP 114
Query: 118 EVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTS- 176
++ + Q+ G+ Y+ +HRDL+ +N+L+ V K+ DFG++R YT+
Sbjct: 115 QLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIED--NEYTAR 172
Query: 177 --LVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKK----PLFSGTTEVDQIDKI 230
+ + APE L +++ D+WS G ++ EL K P +DQ+++
Sbjct: 173 QGAKFPIKWTAPEAALYG-RFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG 231
Query: 231 FK 232
++
Sbjct: 232 YR 233
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 123/301 (40%), Gaps = 62/301 (20%)
Query: 16 LNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDH 75
+ K+ EG + V G ALK++ C E + RE ++ F+H
Sbjct: 34 IQKLGEGGFSYVDLVEGLHDGHFYALKRIL--------CHEQQDREEAQREADMHRLFNH 85
Query: 76 PSIVNVKEVVMDDHDS---VYMVMEYMEHDLKW-LMESMKQP---FSTSEVKCLMLQLLE 128
P+I+ + + + + ++++ + + W +E +K + ++ L+L +
Sbjct: 86 PNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICR 145
Query: 129 GVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQY-----GS----PLKPYTSLVV 179
G++ +H HRDLK +N+LL ++G + D G Q GS L+ + +
Sbjct: 146 GLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRC 205
Query: 180 TLWYRAPELLLGAKK--YSTAVDMWSVGCIM-AELLAKKPLFSGTTEVDQIDKIFKTLGT 236
T+ YRAPEL D+WS+GC++ A + + P D +F+
Sbjct: 206 TISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGP----------YDMVFQK--- 252
Query: 237 PTETIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEK 296
G A Q N L S SP S + + LLN ++T DP +
Sbjct: 253 -------------GDSVALAVQ--NQL-------SIPQSPRHSSALWQLLNSMMTVDPHQ 290
Query: 297 R 297
R
Sbjct: 291 R 291
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 102/208 (49%), Gaps = 17/208 (8%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISS---LREIN 68
EF+K+ + G +G VY+ GE KVK+ V KE E P ++ L E
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGE-----KVKIPVAIKE-LREATSPKANKEILDEAY 72
Query: 69 ILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHD--LKWLMESMKQPFSTSEVKCLMLQL 126
++ S D+P + + + + +V ++ + M L ++ E K + + +Q+
Sbjct: 73 VMASVDNPHVCRLLGICLTS--TVQLITQLMPFGCLLDYVREH-KDNIGSQYLLNWCVQI 129
Query: 127 LEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSL--VVTLWYR 184
+G+ YL D ++HRDL N+L+ +KI DFG+++ G+ K Y + V + +
Sbjct: 130 AKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 189
Query: 185 APELLLGAKKYSTAVDMWSVGCIMAELL 212
A E +L + Y+ D+WS G + EL+
Sbjct: 190 ALESIL-HRIYTHQSDVWSYGVTVWELM 216
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 86/182 (47%), Gaps = 14/182 (7%)
Query: 60 PISSLREINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHD--LKWLMESMKQPFSTS 117
P + L+E ++ H +V + VV + +Y+V EYM L +L M +
Sbjct: 57 PEAFLQEAQVMKKIRHEKLVQLYAVV--SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLP 114
Query: 118 EVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTS- 176
++ + Q+ G+ Y+ +HRDL+ +N+L+ V K+ DFG++R YT+
Sbjct: 115 QLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIED--NEYTAR 172
Query: 177 --LVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKK----PLFSGTTEVDQIDKI 230
+ + APE L +++ D+WS G ++ EL K P +DQ+++
Sbjct: 173 QGAKFPIKWTAPEAALYG-RFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG 231
Query: 231 FK 232
++
Sbjct: 232 YR 233
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 102/208 (49%), Gaps = 17/208 (8%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISS---LREIN 68
EF+K+ + G +G VY+ GE KVK+ V KE E P ++ L E
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGE-----KVKIPVAIKE-LREATSPKANKEILDEAY 69
Query: 69 ILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHD--LKWLMESMKQPFSTSEVKCLMLQL 126
++ S D+P + + + + +V ++ + M L ++ E K + + +Q+
Sbjct: 70 VMASVDNPHVCRLLGICLTS--TVQLITQLMPFGCLLDYVREH-KDNIGSQYLLNWCVQI 126
Query: 127 LEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSL--VVTLWYR 184
+G+ YL D ++HRDL N+L+ +KI DFG+++ G+ K Y + V + +
Sbjct: 127 AKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 186
Query: 185 APELLLGAKKYSTAVDMWSVGCIMAELL 212
A E +L + Y+ D+WS G + EL+
Sbjct: 187 ALESIL-HRIYTHQSDVWSYGVTVWELM 213
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 102/208 (49%), Gaps = 17/208 (8%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISS---LREIN 68
EF+K+ + G +G VY+ GE KVK+ V KE E P ++ L E
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLWIPEGE-----KVKIPVAIKE-LREATSPKANKEILDEAY 76
Query: 69 ILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHD--LKWLMESMKQPFSTSEVKCLMLQL 126
++ S D+P + + + + +V ++ + M L ++ E K + + +Q+
Sbjct: 77 VMASVDNPHVCRLLGICLTS--TVQLITQLMPFGCLLDYVREH-KDNIGSQYLLNWCVQI 133
Query: 127 LEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSL--VVTLWYR 184
+G+ YL D ++HRDL N+L+ +KI DFG+++ G+ K Y + V + +
Sbjct: 134 AKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 193
Query: 185 APELLLGAKKYSTAVDMWSVGCIMAELL 212
A E +L + Y+ D+WS G + EL+
Sbjct: 194 ALESIL-HRIYTHQSDVWSYGVTVWELM 220
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 102/209 (48%), Gaps = 17/209 (8%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISS---LREIN 68
EF+K+ + G +G VY+ GE KVK+ V KE E P ++ L E
Sbjct: 26 EFKKIKVLGSGAFGTVYKGLWIPEGE-----KVKIPVAIKE-LREATSPKANKEILDEAY 79
Query: 69 ILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHD--LKWLMESMKQPFSTSEVKCLMLQL 126
++ S D+P + + + + +V ++ + M L ++ E K + + +Q+
Sbjct: 80 VMASVDNPHVCRLLGICLTS--TVQLITQLMPFGCLLDYVREH-KDNIGSQYLLNWCVQI 136
Query: 127 LEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSL--VVTLWYR 184
+G+ YL D ++HRDL N+L+ +KI DFG+++ G+ K Y + V + +
Sbjct: 137 AKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 196
Query: 185 APELLLGAKKYSTAVDMWSVGCIMAELLA 213
A E +L + Y+ D+WS G + EL+
Sbjct: 197 ALESIL-HRIYTHQSDVWSYGVTVWELMT 224
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 93/184 (50%), Gaps = 15/184 (8%)
Query: 64 LREINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLM 123
L E N++ D+P IV + + + + +S +VME E L L + ++Q + +
Sbjct: 74 LAEANVMQQLDNPYIVRM--IGICEAESWMLVMEMAE--LGPLNKYLQQNRHVKDKNIIE 129
Query: 124 L--QLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTL 181
L Q+ G+KYL ++ +HRDL N+LL Q KI DFG+S+ + Y +
Sbjct: 130 LVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGK 189
Query: 182 W---YRAPELLLGAKKYSTAVDMWSVGCIMAELLA--KKPLFSGT--TEVDQIDKIFKTL 234
W + APE + K+S+ D+WS G +M E + +KP + G +EV + + + +
Sbjct: 190 WPVKWYAPE-CINYYKFSSKSDVWSFGVLMWEAFSYGQKP-YRGMKGSEVTAMLEKGERM 247
Query: 235 GTPT 238
G P
Sbjct: 248 GCPA 251
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 86/182 (47%), Gaps = 14/182 (7%)
Query: 60 PISSLREINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHD--LKWLMESMKQPFSTS 117
P + L+E ++ H +V + VV + +Y+V EYM L +L M +
Sbjct: 48 PEAFLQEAQVMKKLRHEKLVQLYAVV--SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLP 105
Query: 118 EVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTS- 176
++ + Q+ G+ Y+ +HRDL+ +N+L+ V K+ DFG++R YT+
Sbjct: 106 QLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIED--NEYTAR 163
Query: 177 --LVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKK----PLFSGTTEVDQIDKI 230
+ + APE L +++ D+WS G ++ EL K P +DQ+++
Sbjct: 164 QGAKFPIKWTAPEAALYG-RFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG 222
Query: 231 FK 232
++
Sbjct: 223 YR 224
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 86/182 (47%), Gaps = 14/182 (7%)
Query: 60 PISSLREINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHD--LKWLMESMKQPFSTS 117
P + L+E ++ H +V + VV + +Y+V EYM L +L M +
Sbjct: 46 PEAFLQEAQVMKKLRHEKLVQLYAVV--SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLP 103
Query: 118 EVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTS- 176
++ + Q+ G+ Y+ +HRDL+ +N+L+ V K+ DFG++R YT+
Sbjct: 104 QLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIED--NEYTAR 161
Query: 177 --LVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKK----PLFSGTTEVDQIDKI 230
+ + APE L +++ D+WS G ++ EL K P +DQ+++
Sbjct: 162 QGAKFPIKWTAPEAALYG-RFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG 220
Query: 231 FK 232
++
Sbjct: 221 YR 222
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 86/161 (53%), Gaps = 9/161 (5%)
Query: 63 SLREINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEH-DLKWLMESMKQP-FSTSEVK 120
+L E IL + +V++ + D++ +V+ M DLK+ + M Q F +
Sbjct: 231 ALNEKQILEKVNSRFVVSLA-YAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAV 289
Query: 121 CLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQY--GSPLKPYTSLV 178
++ G++ LH +++RDLK N+LL++ G ++I D G++ G +K V
Sbjct: 290 FYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIK---GRV 346
Query: 179 VTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFS 219
T+ Y APE++ ++Y+ + D W++GC++ E++A + F
Sbjct: 347 GTVGYMAPEVVKN-ERYTFSPDWWALGCLLYEMIAGQSPFQ 386
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 69/311 (22%), Positives = 122/311 (39%), Gaps = 37/311 (11%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSL-REINILL 71
FE + ++ E G AR + ++ ++ + + K+ G S + RE+ +L
Sbjct: 10 FEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQP----GHIRSRVFREVEMLY 65
Query: 72 SFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVK 131
V ++ D Y+V E M ++ F+ E ++ + +
Sbjct: 66 QCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALD 125
Query: 132 YLHDNWVLHRDLKTSNLLL---NNQGVLKICDF--GMSRQYGSPLKPYTSLVV-----TL 181
+LH+ + HRDLK N+L N +KICDF G + P ++ + +
Sbjct: 126 FLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSA 185
Query: 182 WYRAPELLLG----AKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTP 237
Y APE++ A Y D+WS+G I+ LL+ P F G D
Sbjct: 186 EYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSD------------ 233
Query: 238 TETIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKR 297
W P + N + + FP + +S + DL+++LL D ++R
Sbjct: 234 --CGWDRGEACPACQ-NMLFESIQEGKYEFPDKDWAH---ISCAAKDLISKLLVRDAKQR 287
Query: 298 ITVDDALNHYW 308
++ L H W
Sbjct: 288 LSAAQVLQHPW 298
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 86/182 (47%), Gaps = 14/182 (7%)
Query: 60 PISSLREINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHD--LKWLMESMKQPFSTS 117
P + L+E ++ H +V + VV + +Y+V EYM L +L M +
Sbjct: 57 PEAFLQEAQVMKKLRHEKLVQLYAVV--SEEPIYIVCEYMSKGSLLDFLKGEMGKYLRLP 114
Query: 118 EVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTS- 176
++ + Q+ G+ Y+ +HRDL+ +N+L+ V K+ DFG++R YT+
Sbjct: 115 QLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIED--NEYTAR 172
Query: 177 --LVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKK----PLFSGTTEVDQIDKI 230
+ + APE L +++ D+WS G ++ EL K P +DQ+++
Sbjct: 173 QGAKFPIKWTAPEAALYG-RFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG 231
Query: 231 FK 232
++
Sbjct: 232 YR 233
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 100/219 (45%), Gaps = 27/219 (12%)
Query: 9 SVFEFEKLNKISE---GTYGIVYRAR----DKKSGEIVALKKVKMNVGRKEDCLEYGFPI 61
++FE L IS+ G +G V R +G +VA+K+++ + ++ +
Sbjct: 2 TIFEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQ----- 56
Query: 62 SSLREINILLSFDHPSIVNVKEVVMD-DHDSVYMVMEYMEHD-LKWLMESMKQPFSTSEV 119
REI IL + IV + V + +VMEY+ L+ ++ + S +
Sbjct: 57 ---REIQILKALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRL 113
Query: 120 KCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVV 179
Q+ +G++YL +HRDL N+L+ ++ +KI DFG+++ PL +V
Sbjct: 114 LLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLL--PLDKDXXVVR 171
Query: 180 ------TLWYRAPELLLGAKKYSTAVDMWSVGCIMAELL 212
WY APE L +S D+WS G ++ EL
Sbjct: 172 EPGQSPIFWY-APE-SLSDNIFSRQSDVWSFGVVLYELF 208
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 84/161 (52%), Gaps = 14/161 (8%)
Query: 60 PISSLREINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQP----FS 115
P + L E N++ H +V + VV + +Y++ EYME+ L++ +K P +
Sbjct: 62 PDAFLAEANLMKQLQHQRLVRLYAVVT--QEPIYIITEYMENGS--LVDFLKTPSGIKLT 117
Query: 116 TSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYT 175
+++ + Q+ EG+ ++ + +HRDL+ +N+L+++ KI DFG++R YT
Sbjct: 118 INKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIED--NEYT 175
Query: 176 S---LVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA 213
+ + + APE + ++ D+WS G ++ E++
Sbjct: 176 AREGAKFPIKWTAPE-AINYGTFTIKSDVWSFGILLTEIVT 215
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 86/182 (47%), Gaps = 14/182 (7%)
Query: 60 PISSLREINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHD--LKWLMESMKQPFSTS 117
P + L+E ++ H +V + VV + +Y+V EYM L +L M +
Sbjct: 57 PEAFLQEAQVMKKLRHEKLVQLYAVV--SEEPIYIVTEYMSKGCLLDFLKGEMGKYLRLP 114
Query: 118 EVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTS- 176
++ + Q+ G+ Y+ +HRDL+ +N+L+ V K+ DFG++R YT+
Sbjct: 115 QLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIED--NEYTAR 172
Query: 177 --LVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKK----PLFSGTTEVDQIDKI 230
+ + APE L +++ D+WS G ++ EL K P +DQ+++
Sbjct: 173 QGAKFPIKWTAPEAALYG-RFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG 231
Query: 231 FK 232
++
Sbjct: 232 YR 233
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 93/184 (50%), Gaps = 15/184 (8%)
Query: 64 LREINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLM 123
L E N++ D+P IV + + + + +S +VME E L L + ++Q + +
Sbjct: 66 LAEANVMQQLDNPYIVRM--IGICEAESWMLVMEMAE--LGPLNKYLQQNRHVKDKNIIE 121
Query: 124 L--QLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTL 181
L Q+ G+KYL ++ +HRDL N+LL Q KI DFG+S+ + Y +
Sbjct: 122 LVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGK 181
Query: 182 W---YRAPELLLGAKKYSTAVDMWSVGCIMAELLA--KKPLFSGT--TEVDQIDKIFKTL 234
W + APE + K+S+ D+WS G +M E + +KP + G +EV + + + +
Sbjct: 182 WPVKWYAPE-CINYYKFSSKSDVWSFGVLMWEAFSYGQKP-YRGMKGSEVTAMLEKGERM 239
Query: 235 GTPT 238
G P
Sbjct: 240 GCPA 243
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 86/182 (47%), Gaps = 14/182 (7%)
Query: 60 PISSLREINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHD--LKWLMESMKQPFSTS 117
P + L+E ++ H +V + VV ++ +Y+V EYM L +L M +
Sbjct: 224 PEAFLQEAQVMKKLRHEKLVQLYAVVSEE--PIYIVTEYMSKGSLLDFLKGEMGKYLRLP 281
Query: 118 EVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTS- 176
++ + Q+ G+ Y+ +HRDL+ +N+L+ V K+ DFG+ R YT+
Sbjct: 282 QLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLGRLIED--NEYTAR 339
Query: 177 --LVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKK----PLFSGTTEVDQIDKI 230
+ + APE L +++ D+WS G ++ EL K P +DQ+++
Sbjct: 340 QGAKFPIKWTAPEAALYG-RFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG 398
Query: 231 FK 232
++
Sbjct: 399 YR 400
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 93/184 (50%), Gaps = 15/184 (8%)
Query: 64 LREINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLM 123
L E N++ D+P IV + + + + +S +VME E L L + ++Q + +
Sbjct: 76 LAEANVMQQLDNPYIVRM--IGICEAESWMLVMEMAE--LGPLNKYLQQNRHVKDKNIIE 131
Query: 124 L--QLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTL 181
L Q+ G+KYL ++ +HRDL N+LL Q KI DFG+S+ + Y +
Sbjct: 132 LVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGK 191
Query: 182 W---YRAPELLLGAKKYSTAVDMWSVGCIMAELLA--KKPLFSGT--TEVDQIDKIFKTL 234
W + APE + K+S+ D+WS G +M E + +KP + G +EV + + + +
Sbjct: 192 WPVKWYAPE-CINYYKFSSKSDVWSFGVLMWEAFSYGQKP-YRGMKGSEVTAMLEKGERM 249
Query: 235 GTPT 238
G P
Sbjct: 250 GCPA 253
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 93/184 (50%), Gaps = 15/184 (8%)
Query: 64 LREINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLM 123
L E N++ D+P IV + + + + +S +VME E L L + ++Q + +
Sbjct: 76 LAEANVMQQLDNPYIVRM--IGICEAESWMLVMEMAE--LGPLNKYLQQNRHVKDKNIIE 131
Query: 124 L--QLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTL 181
L Q+ G+KYL ++ +HRDL N+LL Q KI DFG+S+ + Y +
Sbjct: 132 LVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGK 191
Query: 182 W---YRAPELLLGAKKYSTAVDMWSVGCIMAELLA--KKPLFSGT--TEVDQIDKIFKTL 234
W + APE + K+S+ D+WS G +M E + +KP + G +EV + + + +
Sbjct: 192 WPVKWYAPE-CINYYKFSSKSDVWSFGVLMWEAFSYGQKP-YRGMKGSEVTAMLEKGERM 249
Query: 235 GTPT 238
G P
Sbjct: 250 GCPA 253
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 93/184 (50%), Gaps = 15/184 (8%)
Query: 64 LREINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLM 123
L E N++ D+P IV + + + + +S +VME E L L + ++Q + +
Sbjct: 60 LAEANVMQQLDNPYIVRM--IGICEAESWMLVMEMAE--LGPLNKYLQQNRHVKDKNIIE 115
Query: 124 L--QLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTL 181
L Q+ G+KYL ++ +HRDL N+LL Q KI DFG+S+ + Y +
Sbjct: 116 LVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGK 175
Query: 182 W---YRAPELLLGAKKYSTAVDMWSVGCIMAELLA--KKPLFSGT--TEVDQIDKIFKTL 234
W + APE + K+S+ D+WS G +M E + +KP + G +EV + + + +
Sbjct: 176 WPVKWYAPE-CINYYKFSSKSDVWSFGVLMWEAFSYGQKP-YRGMKGSEVTAMLEKGERM 233
Query: 235 GTPT 238
G P
Sbjct: 234 GCPA 237
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 84/161 (52%), Gaps = 14/161 (8%)
Query: 60 PISSLREINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQP----FS 115
P + L E N++ H +V + VV + +Y++ EYME+ L++ +K P +
Sbjct: 57 PDAFLAEANLMKQLQHQRLVRLYAVVT--QEPIYIITEYMENGS--LVDFLKTPSGIKLT 112
Query: 116 TSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYT 175
+++ + Q+ EG+ ++ + +HRDL+ +N+L+++ KI DFG++R YT
Sbjct: 113 INKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIED--NEYT 170
Query: 176 S---LVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA 213
+ + + APE + ++ D+WS G ++ E++
Sbjct: 171 AREGAKFPIKWTAPE-AINYGTFTIKSDVWSFGILLTEIVT 210
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 84/161 (52%), Gaps = 14/161 (8%)
Query: 60 PISSLREINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQP----FS 115
P + L E N++ H +V + VV + +Y++ EYME+ L++ +K P +
Sbjct: 58 PDAFLAEANLMKQLQHQRLVRLYAVVT--QEPIYIITEYMENGS--LVDFLKTPSGIKLT 113
Query: 116 TSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYT 175
+++ + Q+ EG+ ++ + +HRDL+ +N+L+++ KI DFG++R YT
Sbjct: 114 INKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIED--NEYT 171
Query: 176 S---LVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA 213
+ + + APE + ++ D+WS G ++ E++
Sbjct: 172 AREGAKFPIKWTAPE-AINYGTFTIKSDVWSFGILLTEIVT 211
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 86/161 (53%), Gaps = 9/161 (5%)
Query: 63 SLREINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEH-DLKWLMESMKQP-FSTSEVK 120
+L E IL + +V++ + D++ +V+ M DLK+ + M Q F +
Sbjct: 231 ALNEKQILEKVNSRFVVSLA-YAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAV 289
Query: 121 CLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQY--GSPLKPYTSLV 178
++ G++ LH +++RDLK N+LL++ G ++I D G++ G +K V
Sbjct: 290 FYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIK---GRV 346
Query: 179 VTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFS 219
T+ Y APE++ ++Y+ + D W++GC++ E++A + F
Sbjct: 347 GTVGYMAPEVVKN-ERYTFSPDWWALGCLLYEMIAGQSPFQ 386
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 102/209 (48%), Gaps = 17/209 (8%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISS---LREIN 68
EF+K+ + G +G VY+ GE KVK+ V KE E P ++ L E
Sbjct: 10 EFKKIKVLGSGAFGTVYKGLWIPEGE-----KVKIPVAIKE-LREATSPKANKEILDEAY 63
Query: 69 ILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHD--LKWLMESMKQPFSTSEVKCLMLQL 126
++ S D+P + + + + +V ++ + M L ++ E K + + +Q+
Sbjct: 64 VMASVDNPHVCRLLGICLTS--TVQLITQLMPFGCLLDYVREH-KDNIGSQYLLNWCVQI 120
Query: 127 LEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSL--VVTLWYR 184
+G+ YL D ++HRDL N+L+ +KI DFG+++ G+ K Y + V + +
Sbjct: 121 AKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 180
Query: 185 APELLLGAKKYSTAVDMWSVGCIMAELLA 213
A E +L + Y+ D+WS G + EL+
Sbjct: 181 ALESIL-HRIYTHQSDVWSYGVTVWELMT 208
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 84/160 (52%), Gaps = 14/160 (8%)
Query: 60 PISSLREINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQP----FS 115
P + L E N++ H +V + VV + +Y++ EYME+ L++ +K P +
Sbjct: 47 PDAFLAEANLMKQLQHQRLVRLYAVVT--QEPIYIITEYMENGS--LVDFLKTPSGIKLT 102
Query: 116 TSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYT 175
+++ + Q+ EG+ ++ + +HRDL+ +N+L+++ KI DFG++R YT
Sbjct: 103 INKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIED--NEYT 160
Query: 176 S---LVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELL 212
+ + + APE + ++ D+WS G ++ E++
Sbjct: 161 AREGAKFPIKWTAPE-AINYGTFTIKSDVWSFGILLTEIV 199
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 102/208 (49%), Gaps = 17/208 (8%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISS---LREIN 68
EF+K+ + G +G VY+ GE KVK+ V KE E P ++ L E
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGE-----KVKIPVAIKE-LREATSPKANKEILDEAY 69
Query: 69 ILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHD--LKWLMESMKQPFSTSEVKCLMLQL 126
++ S D+P + + + + +V ++ + M L ++ E K + + +Q+
Sbjct: 70 VMASVDNPHVCRLLGICLTS--TVQLITQLMPFGCLLDYVREH-KDNIGSQYLLNWCVQI 126
Query: 127 LEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSL--VVTLWYR 184
+G+ YL D ++HRDL N+L+ +KI DFG+++ G+ K Y + V + +
Sbjct: 127 AKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 186
Query: 185 APELLLGAKKYSTAVDMWSVGCIMAELL 212
A E +L + Y+ D+WS G + EL+
Sbjct: 187 ALESIL-HRIYTHQSDVWSYGVTVWELM 213
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 93/184 (50%), Gaps = 15/184 (8%)
Query: 64 LREINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLM 123
L E N++ D+P IV + + + + +S +VME E L L + ++Q + +
Sbjct: 54 LAEANVMQQLDNPYIVRM--IGICEAESWMLVMEMAE--LGPLNKYLQQNRHVKDKNIIE 109
Query: 124 L--QLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTL 181
L Q+ G+KYL ++ +HRDL N+LL Q KI DFG+S+ + Y +
Sbjct: 110 LVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGK 169
Query: 182 W---YRAPELLLGAKKYSTAVDMWSVGCIMAELLA--KKPLFSGT--TEVDQIDKIFKTL 234
W + APE + K+S+ D+WS G +M E + +KP + G +EV + + + +
Sbjct: 170 WPVKWYAPE-CINYYKFSSKSDVWSFGVLMWEAFSYGQKP-YRGMKGSEVTAMLEKGERM 227
Query: 235 GTPT 238
G P
Sbjct: 228 GCPA 231
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 82/158 (51%), Gaps = 10/158 (6%)
Query: 60 PISSLREINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQP----FS 115
P + L E N++ H +V + VV + +Y++ EYME+ L++ +K P +
Sbjct: 52 PDAFLAEANLMKQLQHQRLVRLYAVVT--QEPIYIITEYMENGS--LVDFLKTPSGIKLT 107
Query: 116 TSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQY-GSPLKPY 174
+++ + Q+ EG+ ++ + +HRDL+ +N+L+++ KI DFG++R +
Sbjct: 108 INKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAR 167
Query: 175 TSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELL 212
+ + APE + ++ D+WS G ++ E++
Sbjct: 168 EGAKFPIKWTAPE-AINYGTFTIKSDVWSFGILLTEIV 204
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 93/184 (50%), Gaps = 15/184 (8%)
Query: 64 LREINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLM 123
L E N++ D+P IV + + + + +S +VME E L L + ++Q + +
Sbjct: 56 LAEANVMQQLDNPYIVRM--IGICEAESWMLVMEMAE--LGPLNKYLQQNRHVKDKNIIE 111
Query: 124 L--QLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTL 181
L Q+ G+KYL ++ +HRDL N+LL Q KI DFG+S+ + Y +
Sbjct: 112 LVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGK 171
Query: 182 W---YRAPELLLGAKKYSTAVDMWSVGCIMAELLA--KKPLFSGT--TEVDQIDKIFKTL 234
W + APE + K+S+ D+WS G +M E + +KP + G +EV + + + +
Sbjct: 172 WPVKWYAPE-CINYYKFSSKSDVWSFGVLMWEAFSYGQKP-YRGMKGSEVTAMLEKGERM 229
Query: 235 GTPT 238
G P
Sbjct: 230 GCPA 233
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 82/159 (51%), Gaps = 10/159 (6%)
Query: 60 PISSLREINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQP----FS 115
P + L E N++ H +V + VV + +Y++ EYME+ L++ +K P +
Sbjct: 60 PDAFLAEANLMKQLQHQRLVRLYAVVT--QEPIYIITEYMENGS--LVDFLKTPSGIKLT 115
Query: 116 TSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQY-GSPLKPY 174
+++ + Q+ EG+ ++ + +HRDL+ +N+L+++ KI DFG++R +
Sbjct: 116 INKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAR 175
Query: 175 TSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA 213
+ + APE + ++ D+WS G ++ E++
Sbjct: 176 EGAKFPIKWTAPE-AINYGTFTIKSDVWSFGILLTEIVT 213
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 120/260 (46%), Gaps = 28/260 (10%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILL 71
E L ++ G +G+V + K + VA+K +K +++ + E ++
Sbjct: 9 EITLLKELGSGQFGVVKLGKWKGQYD-VAVKMIKEGSMSEDEFFQ---------EAQTMM 58
Query: 72 SFDHPSIVNVKEVVMDDHDSVYMVMEYMEHD-LKWLMESMKQPFSTSEVKCLMLQLLEGV 130
HP +V V ++ +Y+V EY+ + L + S + S++ + + EG+
Sbjct: 59 KLSHPKLVKFYGVCSKEY-PIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGM 117
Query: 131 KYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLW---YRAPE 187
+L + +HRDL N L++ +K+ DFGM+R Y S V T + + APE
Sbjct: 118 AFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLD--DQYVSSVGTKFPVKWSAPE 175
Query: 188 LLLGAKKYSTAVDMWSVGCIMAEL--LAKKP--LFSGTT---EVDQIDKIFK---TLGTP 237
+ KYS+ D+W+ G +M E+ L K P L++ + +V Q ++++ T
Sbjct: 176 -VFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGHRLYRPHLASDTI 234
Query: 238 TETIWPGLSELPGAKANFAK 257
+ ++ ELP + F +
Sbjct: 235 YQIMYSCWHELPEKRPTFQQ 254
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 82/159 (51%), Gaps = 10/159 (6%)
Query: 60 PISSLREINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQP----FS 115
P + L E N++ H +V + VV + +Y++ EYME+ L++ +K P +
Sbjct: 58 PDAFLAEANLMKQLQHQRLVRLYAVVT--QEPIYIITEYMENGS--LVDFLKTPSGIKLT 113
Query: 116 TSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQY-GSPLKPY 174
+++ + Q+ EG+ ++ + +HRDL+ +N+L+++ KI DFG++R +
Sbjct: 114 INKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAR 173
Query: 175 TSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA 213
+ + APE + ++ D+WS G ++ E++
Sbjct: 174 EGAKFPIKWTAPE-AINYGTFTIKSDVWSFGILLTEIVT 211
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 84/161 (52%), Gaps = 14/161 (8%)
Query: 60 PISSLREINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQP----FS 115
P + L E N++ H +V + VV + +Y++ EYME+ L++ +K P +
Sbjct: 52 PDAFLAEANLMKQLQHQRLVRLYAVVT--QEPIYIITEYMENGS--LVDFLKTPSGIKLT 107
Query: 116 TSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYT 175
+++ + Q+ EG+ ++ + +HRDL+ +N+L+++ KI DFG++R YT
Sbjct: 108 INKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIED--NEYT 165
Query: 176 S---LVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA 213
+ + + APE + ++ D+WS G ++ E++
Sbjct: 166 AREGAKFPIKWTAPE-AINYGTFTIKSDVWSFGILLTEIVT 205
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 82/159 (51%), Gaps = 10/159 (6%)
Query: 60 PISSLREINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQP----FS 115
P + L E N++ H +V + VV + +Y++ EYME+ L++ +K P +
Sbjct: 61 PDAFLAEANLMKQLQHQRLVRLYAVVT--QEPIYIITEYMENGS--LVDFLKTPSGIKLT 116
Query: 116 TSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQY-GSPLKPY 174
+++ + Q+ EG+ ++ + +HRDL+ +N+L+++ KI DFG++R +
Sbjct: 117 INKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAR 176
Query: 175 TSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA 213
+ + APE + ++ D+WS G ++ E++
Sbjct: 177 EGAKFPIKWTAPE-AINYGTFTIKSDVWSFGILLTEIVT 214
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 82/159 (51%), Gaps = 10/159 (6%)
Query: 60 PISSLREINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQP----FS 115
P + L E N++ H +V + VV + +Y++ EYME+ L++ +K P +
Sbjct: 52 PDAFLAEANLMKQLQHQRLVRLYAVVT--QEPIYIITEYMENGS--LVDFLKTPSGIKLT 107
Query: 116 TSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQY-GSPLKPY 174
+++ + Q+ EG+ ++ + +HRDL+ +N+L+++ KI DFG++R +
Sbjct: 108 INKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAR 167
Query: 175 TSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA 213
+ + APE + ++ D+WS G ++ E++
Sbjct: 168 EGAKFPIKWTAPE-AINYGTFTIKSDVWSFGILLTEIVT 205
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 93/213 (43%), Gaps = 27/213 (12%)
Query: 19 ISEGTYGIVYRARDKKSG--EIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHP 76
I EG +G V +AR KK G A+K++K K+D ++ + L ++ HP
Sbjct: 30 IGEGNFGQVLKARIKKDGLRMDAAIKRMK-EYASKDDHRDFAGELEVLCKLG-----HHP 83
Query: 77 SIVNVKEVVMDDHDSVYMVMEYMEHD--LKWLMES--------------MKQPFSTSEVK 120
+I+N+ + +Y+ +EY H L +L +S S+ ++
Sbjct: 84 NIINLLGAC-EHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLL 142
Query: 121 CLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVT 180
+ G+ YL +HR+L N+L+ V KI DFG+SR +K +
Sbjct: 143 HFAADVARGMDYLSQKQFIHRNLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPV 202
Query: 181 LWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA 213
W L Y+T D+WS G ++ E+++
Sbjct: 203 RWMAIESLNYSV--YTTNSDVWSYGVLLWEIVS 233
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 82/159 (51%), Gaps = 10/159 (6%)
Query: 60 PISSLREINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQP----FS 115
P + L E N++ H +V + VV + +Y++ EYME+ L++ +K P +
Sbjct: 54 PDAFLAEANLMKQLQHQRLVRLYAVVT--QEPIYIITEYMENGS--LVDFLKTPSGIKLT 109
Query: 116 TSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQY-GSPLKPY 174
+++ + Q+ EG+ ++ + +HRDL+ +N+L+++ KI DFG++R +
Sbjct: 110 INKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAR 169
Query: 175 TSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA 213
+ + APE + ++ D+WS G ++ E++
Sbjct: 170 EGAKFPIKWTAPE-AINYGTFTIKSDVWSFGILLTEIVT 207
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 82/159 (51%), Gaps = 10/159 (6%)
Query: 60 PISSLREINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQP----FS 115
P + L E N++ H +V + VV + +Y++ EYME+ L++ +K P +
Sbjct: 52 PDAFLAEANLMKQLQHQRLVRLYAVVT--QEPIYIITEYMENGS--LVDFLKTPSGIKLT 107
Query: 116 TSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQY-GSPLKPY 174
+++ + Q+ EG+ ++ + +HRDL+ +N+L+++ KI DFG++R +
Sbjct: 108 INKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAR 167
Query: 175 TSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA 213
+ + APE + ++ D+WS G ++ E++
Sbjct: 168 EGAKFPIKWTAPE-AINYGTFTIKSDVWSFGILLTEIVT 205
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 82/159 (51%), Gaps = 10/159 (6%)
Query: 60 PISSLREINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQP----FS 115
P + L E N++ H +V + VV + +Y++ EYME+ L++ +K P +
Sbjct: 53 PDAFLAEANLMKQLQHQRLVRLYAVVT--QEPIYIITEYMENGS--LVDFLKTPSGIKLT 108
Query: 116 TSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQY-GSPLKPY 174
+++ + Q+ EG+ ++ + +HRDL+ +N+L+++ KI DFG++R +
Sbjct: 109 INKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAR 168
Query: 175 TSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA 213
+ + APE + ++ D+WS G ++ E++
Sbjct: 169 EGAKFPIKWTAPE-AINYGTFTIKSDVWSFGILLTEIVT 206
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 101/208 (48%), Gaps = 17/208 (8%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISS---LREIN 68
EF+K+ + G +G VY+ GE KVK+ V KE E P ++ L E
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGE-----KVKIPVAIKE-LREATSPKANKEILDEAY 71
Query: 69 ILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHD--LKWLMESMKQPFSTSEVKCLMLQL 126
++ S D+P + + + + +V ++ + M L ++ E K + + +Q+
Sbjct: 72 VMASVDNPHVCRLLGICLTS--TVQLITQLMPFGCLLDYVREH-KDNIGSQYLLNWCVQI 128
Query: 127 LEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSL--VVTLWYR 184
+G+ YL D ++HRDL N+L+ +KI DFG ++ G+ K Y + V + +
Sbjct: 129 AKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWM 188
Query: 185 APELLLGAKKYSTAVDMWSVGCIMAELL 212
A E +L + Y+ D+WS G + EL+
Sbjct: 189 ALESIL-HRIYTHQSDVWSYGVTVWELM 215
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 85/182 (46%), Gaps = 14/182 (7%)
Query: 60 PISSLREINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHD--LKWLMESMKQPFSTS 117
P + L+E ++ H +V + VV + +Y+V EYM L +L M +
Sbjct: 57 PEAFLQEAQVMKKLRHEKLVQLYAVV--SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLP 114
Query: 118 EVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTS- 176
++ + Q+ G+ Y+ +HRDL +N+L+ V K+ DFG++R YT+
Sbjct: 115 QLVDMAAQIASGMAYVERMNYVHRDLAAANILVGENLVCKVADFGLARLIED--NEYTAR 172
Query: 177 --LVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKK----PLFSGTTEVDQIDKI 230
+ + APE L +++ D+WS G ++ EL K P +DQ+++
Sbjct: 173 QGAKFPIKWTAPEAALYG-RFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG 231
Query: 231 FK 232
++
Sbjct: 232 YR 233
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/311 (22%), Positives = 125/311 (40%), Gaps = 54/311 (17%)
Query: 19 ISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFD-HPS 77
+ EG Y V A ++G+ A+K ++ G RE+ L + +
Sbjct: 21 LGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRS--------RVFREVETLYQCQGNKN 72
Query: 78 IVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNW 137
I+ + E DD Y+V E ++ ++ F+ E ++ + + +LH
Sbjct: 73 ILELIEFFEDD-TRFYLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAALDFLHTKG 131
Query: 138 VLHRDLKTSNLLLNNQ---GVLKICDF--GMSRQYGSPLKPYTSLVVT-----LWYRAPE 187
+ HRDLK N+L + +KICDF G + + P T+ +T Y APE
Sbjct: 132 IAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPE 191
Query: 188 LLL----GAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVD------QIDKIFKTLGTP 237
++ A Y D+WS+G ++ +L+ P F G D ++ ++ +
Sbjct: 192 VVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRGEVCRVCQN--KL 249
Query: 238 TETIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKR 297
E+I G E P ++A +S DL+++LL D ++R
Sbjct: 250 FESIQEGKYEFP--DKDWAH--------------------ISSEAKDLISKLLVRDAKQR 287
Query: 298 ITVDDALNHYW 308
++ L H W
Sbjct: 288 LSAAQVLQHPW 298
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 86/182 (47%), Gaps = 14/182 (7%)
Query: 60 PISSLREINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHD--LKWLMESMKQPFSTS 117
P + L+E ++ H +V + VV ++ +Y+V EYM L +L +
Sbjct: 306 PEAFLQEAQVMKKLRHEKLVQLYAVVSEE--PIYIVTEYMSKGSLLDFLKGETGKYLRLP 363
Query: 118 EVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTS- 176
++ + Q+ G+ Y+ +HRDL+ +N+L+ V K+ DFG++R YT+
Sbjct: 364 QLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIED--NEYTAR 421
Query: 177 --LVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKK----PLFSGTTEVDQIDKI 230
+ + APE L +++ D+WS G ++ EL K P +DQ+++
Sbjct: 422 QGAKFPIKWTAPEAALYG-RFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG 480
Query: 231 FK 232
++
Sbjct: 481 YR 482
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 101/208 (48%), Gaps = 17/208 (8%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISS---LREIN 68
EF+K+ + G +G VY+ GE KVK+ V KE E P ++ L E
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLWIPEGE-----KVKIPVAIKE-LREATSPKANKEILDEAY 76
Query: 69 ILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHD--LKWLMESMKQPFSTSEVKCLMLQL 126
++ S D+P + + + + +V ++ + M L ++ E K + + +Q+
Sbjct: 77 VMASVDNPHVCRLLGICLTS--TVQLITQLMPFGCLLDYVREH-KDNIGSQYLLNWCVQI 133
Query: 127 LEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSL--VVTLWYR 184
+G+ YL D ++HRDL N+L+ +KI DFG ++ G+ K Y + V + +
Sbjct: 134 AKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWM 193
Query: 185 APELLLGAKKYSTAVDMWSVGCIMAELL 212
A E +L + Y+ D+WS G + EL+
Sbjct: 194 ALESIL-HRIYTHQSDVWSYGVTVWELM 220
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 101/208 (48%), Gaps = 17/208 (8%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISS---LREIN 68
EF+K+ + G +G VY+ GE KVK+ V KE E P ++ L E
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGE-----KVKIPVAIKE-LREATSPKANKEILDEAY 69
Query: 69 ILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHD--LKWLMESMKQPFSTSEVKCLMLQL 126
++ S D+P + + + + +V ++ + M L ++ E K + + +Q+
Sbjct: 70 VMASVDNPHVCRLLGICLTS--TVQLITQLMPFGCLLDYVREH-KDNIGSQYLLNWCVQI 126
Query: 127 LEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSL--VVTLWYR 184
+G+ YL D ++HRDL N+L+ +KI DFG ++ G+ K Y + V + +
Sbjct: 127 AKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWM 186
Query: 185 APELLLGAKKYSTAVDMWSVGCIMAELL 212
A E +L + Y+ D+WS G + EL+
Sbjct: 187 ALESIL-HRIYTHQSDVWSYGVTVWELM 213
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 112/249 (44%), Gaps = 32/249 (12%)
Query: 16 LNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDH 75
L +I G V++ ++K +I A+K V + + Y I+ L + L
Sbjct: 61 LKQIGSGGSSKVFQVLNEKK-QIYAIKYVNLEEADNQTLDSYRNEIAYLNK----LQQHS 115
Query: 76 PSIVNVKEVVMDDHDSVYMVMEYMEHDLK-WLMESMKQPFSTSEVKCLMLQLLEGVKYLH 134
I+ + + + D +YMVME DL WL + K+ E K +LE V +H
Sbjct: 116 DKIIRLYDYEITDQ-YIYMVMECGNIDLNSWLKK--KKSIDPWERKSYWKNMLEAVHTIH 172
Query: 135 DNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVV------TLWYRAPEL 188
+ ++H DLK +N L+ + G+LK+ DFG++ Q ++P T+ VV + Y PE
Sbjct: 173 QHGIVHSDLKPANFLIVD-GMLKLIDFGIANQ----MQPDTTSVVKDSQVGAVNYMPPEA 227
Query: 189 L----------LGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPT 238
+ K S D+WS+GCI+ + K F ++QI K+ +
Sbjct: 228 IKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQI--INQISKLHAIIDPNH 285
Query: 239 ETIWPGLSE 247
E +P + E
Sbjct: 286 EIEFPDIPE 294
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 102/221 (46%), Gaps = 17/221 (7%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLRE-INIL 70
+FE L I G + V + K++G++ A+K + K D L+ G +S RE ++L
Sbjct: 62 DFEILKVIGRGAFSEVAVVKMKQTGQVYAMK-----IMNKWDMLKRG-EVSCFREERDVL 115
Query: 71 LSFDHPSIVNVKEVVMDDHDSVYMVMEY-MEHDLKWLMESMKQPFSTSEVKCLMLQLLEG 129
++ D I + D + +Y+VMEY + DL L+ + + + +++
Sbjct: 116 VNGDRRWITQL-HFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMA 174
Query: 130 VKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVV-TLWYRAPEL 188
+ +H +HRD+K N+LL+ G +++ DFG + + + + V T Y +PE+
Sbjct: 175 IDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEI 234
Query: 189 LLGAKKYSTA------VDMWSVGCIMAELL-AKKPLFSGTT 222
L D W++G E+ + P ++ +T
Sbjct: 235 LQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADST 275
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 112/252 (44%), Gaps = 32/252 (12%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
+ L +I G V++ ++K +I A+K V + + Y I+ L + L
Sbjct: 30 YSILKQIGSGGSSKVFQVLNEKK-QIYAIKYVNLEEADNQTLDSYRNEIAYLNK----LQ 84
Query: 73 FDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLK-WLMESMKQPFSTSEVKCLMLQLLEGVK 131
I+ + + + D +YMVME DL WL + K+ E K +LE V
Sbjct: 85 QHSDKIIRLYDYEITDQ-YIYMVMECGNIDLNSWLKK--KKSIDPWERKSYWKNMLEAVH 141
Query: 132 YLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVV------TLWYRA 185
+H + ++H DLK +N L+ + G+LK+ DFG++ Q ++P VV T+ Y
Sbjct: 142 TIHQHGIVHSDLKPANFLIVD-GMLKLIDFGIANQ----MQPDXXXVVKDSQVGTVNYMP 196
Query: 186 PELL----------LGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLG 235
PE + K S D+WS+GCI+ + K F ++QI K+ +
Sbjct: 197 PEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQI--INQISKLHAIID 254
Query: 236 TPTETIWPGLSE 247
E +P + E
Sbjct: 255 PNHEIEFPDIPE 266
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 102/219 (46%), Gaps = 30/219 (13%)
Query: 18 KISEGTYGIVYRARDK-----KSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
++ +G++G+VY K + VA+K V +E I L E +++
Sbjct: 26 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRER-------IEFLNEASVMKE 78
Query: 73 FDHPSIVNVKEVVMDDHDSVYMVMEYMEH-DLKWLMESMK---------QPFSTSEVKCL 122
F+ +V + VV ++ ++ME M DLK + S++ P S S++ +
Sbjct: 79 FNCHHVVRLLGVVSQGQPTL-VIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQM 137
Query: 123 MLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSR---QYGSPLKPYTSLVV 179
++ +G+ YL+ N +HRDL N ++ +KI DFGM+R + K L+
Sbjct: 138 AGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLP 197
Query: 180 TLWYRAPELLLGAKKYSTAVDMWSVGCIMAEL--LAKKP 216
W L G ++T D+WS G ++ E+ LA++P
Sbjct: 198 VRWMSPESLKDGV--FTTYSDVWSFGVVLWEIATLAEQP 234
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 101/212 (47%), Gaps = 20/212 (9%)
Query: 16 LNKI-SEGTYGIVYRARDKKSGEIVALKKVKMNVGRK---EDCLEYGFPISSLREINILL 71
LN+I EG +G VY G K K+NV K +DC + E I+
Sbjct: 28 LNRILGEGFFGEVYE------GVYTNHKGEKINVAVKTCKKDC-TLDNKEKFMSEAVIMK 80
Query: 72 SFDHPSIVNVKEVVMDDHDSVYMVME-YMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGV 130
+ DHP IV + ++ + + +++ME Y +L +E K + LQ+ + +
Sbjct: 81 NLDHPHIVKLIGII--EEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAM 138
Query: 131 KYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTL--WYRAPEL 188
YL +HRD+ N+L+ + +K+ DFG+SR Y Y + V L + +PE
Sbjct: 139 AYLESINCVHRDIAVRNILVASPECVKLGDFGLSR-YIEDEDYYKASVTRLPIKWMSPE- 196
Query: 189 LLGAKKYSTAVDMWSVGCIMAELLA--KKPLF 218
+ ++++TA D+W M E+L+ K+P F
Sbjct: 197 SINFRRFTTASDVWMFAVCMWEILSFGKQPFF 228
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 101/212 (47%), Gaps = 20/212 (9%)
Query: 16 LNKI-SEGTYGIVYRARDKKSGEIVALKKVKMNVGRK---EDCLEYGFPISSLREINILL 71
LN+I EG +G VY G K K+NV K +DC + E I+
Sbjct: 12 LNRILGEGFFGEVY------EGVYTNHKGEKINVAVKTCKKDC-TLDNKEKFMSEAVIMK 64
Query: 72 SFDHPSIVNVKEVVMDDHDSVYMVME-YMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGV 130
+ DHP IV + ++ + + +++ME Y +L +E K + LQ+ + +
Sbjct: 65 NLDHPHIVKLIGII--EEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAM 122
Query: 131 KYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTL--WYRAPEL 188
YL +HRD+ N+L+ + +K+ DFG+SR Y Y + V L + +PE
Sbjct: 123 AYLESINCVHRDIAVRNILVASPECVKLGDFGLSR-YIEDEDYYKASVTRLPIKWMSPE- 180
Query: 189 LLGAKKYSTAVDMWSVGCIMAELLA--KKPLF 218
+ ++++TA D+W M E+L+ K+P F
Sbjct: 181 SINFRRFTTASDVWMFAVCMWEILSFGKQPFF 212
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 101/212 (47%), Gaps = 20/212 (9%)
Query: 16 LNKI-SEGTYGIVYRARDKKSGEIVALKKVKMNVGRK---EDCLEYGFPISSLREINILL 71
LN+I EG +G VY G K K+NV K +DC + E I+
Sbjct: 16 LNRILGEGFFGEVYE------GVYTNHKGEKINVAVKTCKKDC-TLDNKEKFMSEAVIMK 68
Query: 72 SFDHPSIVNVKEVVMDDHDSVYMVME-YMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGV 130
+ DHP IV + ++ + + +++ME Y +L +E K + LQ+ + +
Sbjct: 69 NLDHPHIVKLIGII--EEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAM 126
Query: 131 KYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTL--WYRAPEL 188
YL +HRD+ N+L+ + +K+ DFG+SR Y Y + V L + +PE
Sbjct: 127 AYLESINCVHRDIAVRNILVASPECVKLGDFGLSR-YIEDEDYYKASVTRLPIKWMSPE- 184
Query: 189 LLGAKKYSTAVDMWSVGCIMAELLA--KKPLF 218
+ ++++TA D+W M E+L+ K+P F
Sbjct: 185 SINFRRFTTASDVWMFAVCMWEILSFGKQPFF 216
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 102/219 (46%), Gaps = 30/219 (13%)
Query: 18 KISEGTYGIVYRARDK-----KSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
++ +G++G+VY K + VA+K V +E I L E +++
Sbjct: 17 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRER-------IEFLNEASVMKE 69
Query: 73 FDHPSIVNVKEVVMDDHDSVYMVMEYMEH-DLKWLMESMK---------QPFSTSEVKCL 122
F+ +V + VV ++ ++ME M DLK + S++ P S S++ +
Sbjct: 70 FNCHHVVRLLGVVSQGQPTL-VIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQM 128
Query: 123 MLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSR---QYGSPLKPYTSLVV 179
++ +G+ YL+ N +HRDL N ++ +KI DFGM+R + K L+
Sbjct: 129 AGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLP 188
Query: 180 TLWYRAPELLLGAKKYSTAVDMWSVGCIMAEL--LAKKP 216
W L G ++T D+WS G ++ E+ LA++P
Sbjct: 189 VRWMSPESLKDGV--FTTYSDVWSFGVVLWEIATLAEQP 225
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 84/160 (52%), Gaps = 14/160 (8%)
Query: 60 PISSLREINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQP----FS 115
P + L E N++ H +V + VV + +Y++ EYME+ L++ +K P +
Sbjct: 48 PDAFLAEANLMKQLQHQRLVRLYAVVT--QEPIYIITEYMENGS--LVDFLKTPSGIKLT 103
Query: 116 TSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYT 175
+++ + Q+ EG+ ++ + +HR+L+ +N+L+++ KI DFG++R YT
Sbjct: 104 INKLLDMAAQIAEGMAFIEERNYIHRNLRAANILVSDTLSCKIADFGLARLIED--NEYT 161
Query: 176 S---LVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELL 212
+ + + APE + ++ D+WS G ++ E++
Sbjct: 162 AREGAKFPIKWTAPE-AINYGTFTIKSDVWSFGILLTEIV 200
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 66/121 (54%), Gaps = 18/121 (14%)
Query: 122 LMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGM---------SRQYGSPLK 172
+ +Q+ E V++LH ++HRDLK SN+ V+K+ DFG+ + +P+
Sbjct: 169 IFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMP 228
Query: 173 PYTS---LVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDK 229
Y + V T Y +PE + G YS VD++S+G I+ EL L+S +T+++++
Sbjct: 229 AYATHXGQVGTKLYMSPEQIHG-NNYSHKVDIFSLGLILFEL-----LYSFSTQMERVRI 282
Query: 230 I 230
I
Sbjct: 283 I 283
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 37/74 (50%), Gaps = 7/74 (9%)
Query: 6 GCRSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLR 65
R + +FE + + G +G+V+ A++K A+K++++ +E E +R
Sbjct: 1 ASRYLTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRL--PNRELARE-----KVMR 53
Query: 66 EINILLSFDHPSIV 79
E+ L +HP IV
Sbjct: 54 EVKALAKLEHPGIV 67
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 86/182 (47%), Gaps = 14/182 (7%)
Query: 60 PISSLREINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHD--LKWLMESMKQPFSTS 117
P + L+E ++ H +V + VV ++ +Y+V EYM L +L +
Sbjct: 223 PEAFLQEAQVMKKLRHEKLVQLYAVVSEE--PIYIVTEYMSKGSLLDFLKGETGKYLRLP 280
Query: 118 EVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTS- 176
++ + Q+ G+ Y+ +HRDL+ +N+L+ V K+ DFG++R YT+
Sbjct: 281 QLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIED--NEYTAR 338
Query: 177 --LVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKK----PLFSGTTEVDQIDKI 230
+ + APE L +++ D+WS G ++ EL K P +DQ+++
Sbjct: 339 QGAKFPIKWTAPEAALYG-RFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG 397
Query: 231 FK 232
++
Sbjct: 398 YR 399
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 86/182 (47%), Gaps = 14/182 (7%)
Query: 60 PISSLREINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHD--LKWLMESMKQPFSTS 117
P + L+E ++ H +V + VV ++ +Y+V EYM L +L +
Sbjct: 223 PEAFLQEAQVMKKLRHEKLVQLYAVVSEE--PIYIVTEYMSKGSLLDFLKGETGKYLRLP 280
Query: 118 EVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTS- 176
++ + Q+ G+ Y+ +HRDL+ +N+L+ V K+ DFG++R YT+
Sbjct: 281 QLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIED--NEYTAR 338
Query: 177 --LVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKK----PLFSGTTEVDQIDKI 230
+ + APE L +++ D+WS G ++ EL K P +DQ+++
Sbjct: 339 QGAKFPIKWTAPEAALYG-RFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG 397
Query: 231 FK 232
++
Sbjct: 398 YR 399
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 85/182 (46%), Gaps = 14/182 (7%)
Query: 60 PISSLREINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHD--LKWLMESMKQPFSTS 117
P + L+E ++ H +V + VV + +Y+V EYM L +L +
Sbjct: 50 PEAFLQEAQVMKKLRHEKLVQLYAVV--SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLP 107
Query: 118 EVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTS- 176
++ + Q+ G+ Y+ +HRDL+ +N+L+ V K+ DFG++R YT+
Sbjct: 108 QLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIED--NEYTAR 165
Query: 177 --LVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKK----PLFSGTTEVDQIDKI 230
+ + APE L +++ D+WS G ++ EL K P +DQ+++
Sbjct: 166 QGAKFPIKWTAPEAALYG-RFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG 224
Query: 231 FK 232
++
Sbjct: 225 YR 226
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 97/210 (46%), Gaps = 32/210 (15%)
Query: 8 RSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREI 67
R + EK K+ G +G V+ A K + VA+K +K E + L E
Sbjct: 181 RESLKLEK--KLGAGQFGEVWMATYNKHTK-VAVKTMKPGSMSVE---------AFLAEA 228
Query: 68 NILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEH----DLKWLMESMKQPFSTSEVKCLM 123
N++ + H +V + VV + +Y++ E+M D E KQP ++
Sbjct: 229 NVMKTLQHDKLVKLHAVVT--KEPIYIITEFMAKGSLLDFLKSDEGSKQPLP--KLIDFS 284
Query: 124 LQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGS-PLKPYTSLVVTLW 182
Q+ EG+ ++ +HRDL+ +N+L++ V KI DFG++R P+K
Sbjct: 285 AQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVGAKFPIK---------- 334
Query: 183 YRAPELLLGAKKYSTAVDMWSVGCIMAELL 212
+ APE + ++ D+WS G ++ E++
Sbjct: 335 WTAPE-AINFGSFTIKSDVWSFGILLMEIV 363
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 77/148 (52%), Gaps = 10/148 (6%)
Query: 90 DSVYMVMEYMEHDLKWLMESMKQPFSTSE--VKCLMLQLLEGVKYLHDNWVLHRDLKTSN 147
DS +++E ME ++ L + + + + E + Q+LE V++ H+ VLHRD+K N
Sbjct: 86 DSFVLILERME-PVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDEN 144
Query: 148 LLLN-NQGVLKICDFGMSRQYGSPLKP--YTSLVVTLWYRAPELLLGAKKYSTAVDMWSV 204
+L++ N+G LK+ DFG G+ LK YT T Y PE + + + + +WS+
Sbjct: 145 ILIDLNRGELKLIDFGS----GALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 200
Query: 205 GCIMAELLAKKPLFSGTTEVDQIDKIFK 232
G ++ +++ F E+ + F+
Sbjct: 201 GILLYDMVCGDIPFEHDEEIIRGQVFFR 228
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 101/209 (48%), Gaps = 17/209 (8%)
Query: 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISS---LREIN 68
EF+K+ + G +G VY+ GE KVK+ V E E P ++ L E
Sbjct: 50 EFKKIKVLGSGAFGTVYKGLWIPEGE-----KVKIPVAIME-LREATSPKANKEILDEAY 103
Query: 69 ILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHD--LKWLMESMKQPFSTSEVKCLMLQL 126
++ S D+P + + + + +V ++ + M L ++ E K + + +Q+
Sbjct: 104 VMASVDNPHVCRLLGICLTS--TVQLITQLMPFGCLLDYVREH-KDNIGSQYLLNWCVQI 160
Query: 127 LEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSL--VVTLWYR 184
+G+ YL D ++HRDL N+L+ +KI DFG+++ G+ K Y + V + +
Sbjct: 161 AKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 220
Query: 185 APELLLGAKKYSTAVDMWSVGCIMAELLA 213
A E +L + Y+ D+WS G + EL+
Sbjct: 221 ALESIL-HRIYTHQSDVWSYGVTVWELMT 248
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 109/228 (47%), Gaps = 42/228 (18%)
Query: 18 KISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLRE---INILLSFD 74
+I G++G VY+ K G+ VA+K +K+ E + ++ LR+ +NILL
Sbjct: 43 RIGSGSFGTVYKG--KWHGD-VAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMG 99
Query: 75 HPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLL------- 127
+ + D++ +V ++ E S+ + E K M QL+
Sbjct: 100 YMT-----------KDNLAIVTQWCEGS------SLYKHLHVQETKFQMFQLIDIARQTA 142
Query: 128 EGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGM----SRQYGSPL--KPYTSLVVTL 181
+G+ YLH ++HRD+K++N+ L+ +KI DFG+ SR GS +P S+ L
Sbjct: 143 QGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSV---L 199
Query: 182 WYRAPELLLGAKK--YSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQI 227
W APE++ +S D++S G ++ EL+ + +S DQI
Sbjct: 200 WM-APEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQI 246
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 103/219 (47%), Gaps = 30/219 (13%)
Query: 18 KISEGTYGIVYRARDK-----KSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
++ +G++G+VY K + VA+K V +E I L E +++
Sbjct: 32 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRER-------IEFLNEASVMKE 84
Query: 73 FDHPSIVNVKEVVMDDHDSVYMVMEYMEH-DLKWLMESMK---------QPFSTSEVKCL 122
F+ +V + VV ++ ++ME M DLK + S++ P S S++ +
Sbjct: 85 FNCHHVVRLLGVVSQGQPTL-VIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQM 143
Query: 123 MLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQ-YGSPL--KPYTSLVV 179
++ +G+ YL+ N +HRDL N ++ +KI DFGM+R Y + K L+
Sbjct: 144 AGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLP 203
Query: 180 TLWYRAPELLLGAKKYSTAVDMWSVGCIMAEL--LAKKP 216
W L G ++T D+WS G ++ E+ LA++P
Sbjct: 204 VRWMSPESLKDGV--FTTYSDVWSFGVVLWEIATLAEQP 240
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 85/182 (46%), Gaps = 14/182 (7%)
Query: 60 PISSLREINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHD--LKWLMESMKQPFSTS 117
P + L+E ++ H +V + VV + +Y+V EYM L +L +
Sbjct: 54 PEAFLQEAQVMKKLRHEKLVQLYAVV--SEEPIYIVTEYMNKGSLLDFLKGETGKYLRLP 111
Query: 118 EVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTS- 176
++ + Q+ G+ Y+ +HRDL+ +N+L+ V K+ DFG++R YT+
Sbjct: 112 QLVDMSAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIED--NEYTAR 169
Query: 177 --LVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKK----PLFSGTTEVDQIDKI 230
+ + APE L +++ D+WS G ++ EL K P +DQ+++
Sbjct: 170 QGAKFPIKWTAPEAALYG-RFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG 228
Query: 231 FK 232
++
Sbjct: 229 YR 230
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 103/219 (47%), Gaps = 30/219 (13%)
Query: 18 KISEGTYGIVYRARDK-----KSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
++ +G++G+VY K + VA+K V +E I L E +++
Sbjct: 32 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRER-------IEFLNEASVMKE 84
Query: 73 FDHPSIVNVKEVVMDDHDSVYMVMEYMEH-DLKWLMESMK---------QPFSTSEVKCL 122
F+ +V + VV ++ ++ME M DLK + S++ P S S++ +
Sbjct: 85 FNCHHVVRLLGVVSQGQPTL-VIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQM 143
Query: 123 MLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQ-YGSPL--KPYTSLVV 179
++ +G+ YL+ N +HRDL N ++ +KI DFGM+R Y + K L+
Sbjct: 144 AGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLP 203
Query: 180 TLWYRAPELLLGAKKYSTAVDMWSVGCIMAEL--LAKKP 216
W L G ++T D+WS G ++ E+ LA++P
Sbjct: 204 VRWMSPESLKDGV--FTTYSDVWSFGVVLWEIATLAEQP 240
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 86/182 (47%), Gaps = 14/182 (7%)
Query: 60 PISSLREINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHD--LKWLMESMKQPFSTS 117
P + L+E ++ H +V + VV ++ +Y+V EYM L +L +
Sbjct: 223 PEAFLQEAQVMKKLRHEKLVQLYAVVSEE--PIYIVGEYMSKGSLLDFLKGETGKYLRLP 280
Query: 118 EVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTS- 176
++ + Q+ G+ Y+ +HRDL+ +N+L+ V K+ DFG++R YT+
Sbjct: 281 QLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIED--NEYTAR 338
Query: 177 --LVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKK----PLFSGTTEVDQIDKI 230
+ + APE L +++ D+WS G ++ EL K P +DQ+++
Sbjct: 339 QGAKFPIKWTAPEAALYG-RFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG 397
Query: 231 FK 232
++
Sbjct: 398 YR 399
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 62/110 (56%), Gaps = 6/110 (5%)
Query: 108 ESMKQPFSTSE-VKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQ 166
E + + F T E + C Q+ +G+++L +HRDL N+LL+ + V+KICDFG++R
Sbjct: 190 EDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARD 249
Query: 167 -YGSP--LKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA 213
Y P ++ + + W APE + + Y+ D+WS G ++ E+ +
Sbjct: 250 IYKDPDYVRKGDARLPLKWM-APETIFD-RVYTIQSDVWSFGVLLWEIFS 297
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 103/219 (47%), Gaps = 30/219 (13%)
Query: 18 KISEGTYGIVYRARDK-----KSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
++ +G++G+VY K + VA+K V +E I L E +++
Sbjct: 23 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRER-------IEFLNEASVMKE 75
Query: 73 FDHPSIVNVKEVVMDDHDSVYMVMEYMEH-DLKWLMESMK---------QPFSTSEVKCL 122
F+ +V + VV ++ ++ME M DLK + S++ P S S++ +
Sbjct: 76 FNCHHVVRLLGVVSQGQPTL-VIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQM 134
Query: 123 MLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQ-YGSPL--KPYTSLVV 179
++ +G+ YL+ N +HRDL N ++ +KI DFGM+R Y + K L+
Sbjct: 135 AGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLP 194
Query: 180 TLWYRAPELLLGAKKYSTAVDMWSVGCIMAEL--LAKKP 216
W L G ++T D+WS G ++ E+ LA++P
Sbjct: 195 VRWMSPESLKDGV--FTTYSDVWSFGVVLWEIATLAEQP 231
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 103/219 (47%), Gaps = 30/219 (13%)
Query: 18 KISEGTYGIVYRARDK-----KSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
++ +G++G+VY K + VA+K V +E I L E +++
Sbjct: 26 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRER-------IEFLNEASVMKE 78
Query: 73 FDHPSIVNVKEVVMDDHDSVYMVMEYMEH-DLKWLMESMK---------QPFSTSEVKCL 122
F+ +V + VV ++ ++ME M DLK + S++ P S S++ +
Sbjct: 79 FNCHHVVRLLGVVSQGQPTL-VIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQM 137
Query: 123 MLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQ-YGSPL--KPYTSLVV 179
++ +G+ YL+ N +HRDL N ++ +KI DFGM+R Y + K L+
Sbjct: 138 AGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLP 197
Query: 180 TLWYRAPELLLGAKKYSTAVDMWSVGCIMAEL--LAKKP 216
W L G ++T D+WS G ++ E+ LA++P
Sbjct: 198 VRWMSPESLKDGV--FTTYSDVWSFGVVLWEIATLAEQP 234
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 103/219 (47%), Gaps = 30/219 (13%)
Query: 18 KISEGTYGIVYRARDK-----KSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
++ +G++G+VY K + VA+K V +E I L E +++
Sbjct: 19 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRER-------IEFLNEASVMKE 71
Query: 73 FDHPSIVNVKEVVMDDHDSVYMVMEYMEH-DLKWLMESMK---------QPFSTSEVKCL 122
F+ +V + VV ++ ++ME M DLK + S++ P S S++ +
Sbjct: 72 FNCHHVVRLLGVVSQGQPTL-VIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQM 130
Query: 123 MLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQ-YGSPL--KPYTSLVV 179
++ +G+ YL+ N +HRDL N ++ +KI DFGM+R Y + K L+
Sbjct: 131 AGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLP 190
Query: 180 TLWYRAPELLLGAKKYSTAVDMWSVGCIMAEL--LAKKP 216
W L G ++T D+WS G ++ E+ LA++P
Sbjct: 191 VRWMSPESLKDGV--FTTYSDVWSFGVVLWEIATLAEQP 227
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 103/219 (47%), Gaps = 30/219 (13%)
Query: 18 KISEGTYGIVYRARDK-----KSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
++ +G++G+VY K + VA+K V +E I L E +++
Sbjct: 25 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRER-------IEFLNEASVMKE 77
Query: 73 FDHPSIVNVKEVVMDDHDSVYMVMEYMEH-DLKWLMESMK---------QPFSTSEVKCL 122
F+ +V + VV ++ ++ME M DLK + S++ P S S++ +
Sbjct: 78 FNCHHVVRLLGVVSQGQPTL-VIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQM 136
Query: 123 MLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQ-YGSPL--KPYTSLVV 179
++ +G+ YL+ N +HRDL N ++ +KI DFGM+R Y + K L+
Sbjct: 137 AGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLP 196
Query: 180 TLWYRAPELLLGAKKYSTAVDMWSVGCIMAEL--LAKKP 216
W L G ++T D+WS G ++ E+ LA++P
Sbjct: 197 VRWMSPESLKDGV--FTTYSDVWSFGVVLWEIATLAEQP 233
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 62/110 (56%), Gaps = 6/110 (5%)
Query: 108 ESMKQPFSTSE-VKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQ 166
E + + F T E + C Q+ +G+++L +HRDL N+LL+ + V+KICDFG++R
Sbjct: 188 EDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARD 247
Query: 167 -YGSP--LKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA 213
Y P ++ + + W APE + + Y+ D+WS G ++ E+ +
Sbjct: 248 IYKDPDYVRKGDARLPLKWM-APETIFD-RVYTIQSDVWSFGVLLWEIFS 295
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 103/219 (47%), Gaps = 30/219 (13%)
Query: 18 KISEGTYGIVYRARDK-----KSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
++ +G++G+VY K + VA+K V +E I L E +++
Sbjct: 22 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRER-------IEFLNEASVMKE 74
Query: 73 FDHPSIVNVKEVVMDDHDSVYMVMEYMEH-DLKWLMESMK---------QPFSTSEVKCL 122
F+ +V + VV ++ ++ME M DLK + S++ P S S++ +
Sbjct: 75 FNCHHVVRLLGVVSQGQPTL-VIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQM 133
Query: 123 MLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQ-YGSPL--KPYTSLVV 179
++ +G+ YL+ N +HRDL N ++ +KI DFGM+R Y + K L+
Sbjct: 134 AGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLP 193
Query: 180 TLWYRAPELLLGAKKYSTAVDMWSVGCIMAEL--LAKKP 216
W L G ++T D+WS G ++ E+ LA++P
Sbjct: 194 VRWMSPESLKDGV--FTTYSDVWSFGVVLWEIATLAEQP 230
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 62/110 (56%), Gaps = 6/110 (5%)
Query: 108 ESMKQPFSTSE-VKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQ 166
E + + F T E + C Q+ +G+++L +HRDL N+LL+ + V+KICDFG++R
Sbjct: 181 EDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARD 240
Query: 167 -YGSP--LKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA 213
Y P ++ + + W APE + + Y+ D+WS G ++ E+ +
Sbjct: 241 IYKDPDYVRKGDARLPLKWM-APETIFD-RVYTIQSDVWSFGVLLWEIFS 288
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 103/219 (47%), Gaps = 30/219 (13%)
Query: 18 KISEGTYGIVYRARDK-----KSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
++ +G++G+VY K + VA+K V +E I L E +++
Sbjct: 54 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRER-------IEFLNEASVMKE 106
Query: 73 FDHPSIVNVKEVVMDDHDSVYMVMEYMEH-DLKWLMESMK---------QPFSTSEVKCL 122
F+ +V + VV ++ ++ME M DLK + S++ P S S++ +
Sbjct: 107 FNCHHVVRLLGVVSQGQPTL-VIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQM 165
Query: 123 MLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQ-YGSPL--KPYTSLVV 179
++ +G+ YL+ N +HRDL N ++ +KI DFGM+R Y + K L+
Sbjct: 166 AGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLP 225
Query: 180 TLWYRAPELLLGAKKYSTAVDMWSVGCIMAEL--LAKKP 216
W L G ++T D+WS G ++ E+ LA++P
Sbjct: 226 VRWMSPESLKDGV--FTTYSDVWSFGVVLWEIATLAEQP 262
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 62/110 (56%), Gaps = 6/110 (5%)
Query: 108 ESMKQPFSTSE-VKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQ 166
E + + F T E + C Q+ +G+++L +HRDL N+LL+ + V+KICDFG++R
Sbjct: 183 EDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARD 242
Query: 167 -YGSP--LKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA 213
Y P ++ + + W APE + + Y+ D+WS G ++ E+ +
Sbjct: 243 IYKDPDYVRKGDARLPLKWM-APETIFD-RVYTIQSDVWSFGVLLWEIFS 290
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 103/219 (47%), Gaps = 30/219 (13%)
Query: 18 KISEGTYGIVYRARDK-----KSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
++ +G++G+VY K + VA+K V +E I L E +++
Sbjct: 25 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRER-------IEFLNEASVMKE 77
Query: 73 FDHPSIVNVKEVVMDDHDSVYMVMEYMEH-DLKWLMESMK---------QPFSTSEVKCL 122
F+ +V + VV ++ ++ME M DLK + S++ P S S++ +
Sbjct: 78 FNCHHVVRLLGVVSQGQPTL-VIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQM 136
Query: 123 MLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQ-YGSPL--KPYTSLVV 179
++ +G+ YL+ N +HRDL N ++ +KI DFGM+R Y + K L+
Sbjct: 137 AGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLP 196
Query: 180 TLWYRAPELLLGAKKYSTAVDMWSVGCIMAEL--LAKKP 216
W L G ++T D+WS G ++ E+ LA++P
Sbjct: 197 VRWMSPESLKDGV--FTTYSDVWSFGVVLWEIATLAEQP 233
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 83/180 (46%), Gaps = 10/180 (5%)
Query: 60 PISSLREINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHD--LKWLMESMKQPFSTS 117
P + L+E ++ H +V + VV + +Y+V EYM L +L +
Sbjct: 54 PEAFLQEAQVMKKLRHEKLVQLYAVV--SEEPIYIVTEYMNKGSLLDFLKGETGKYLRLP 111
Query: 118 EVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQY-GSPLKPYTS 176
++ + Q+ G+ Y+ +HRDL+ +N+L+ V K+ DFG++R +
Sbjct: 112 QLVDMSAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQG 171
Query: 177 LVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKK----PLFSGTTEVDQIDKIFK 232
+ + APE L +++ D+WS G ++ EL K P +DQ+++ ++
Sbjct: 172 AKFPIKWTAPEAALYG-RFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYR 230
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 62/110 (56%), Gaps = 6/110 (5%)
Query: 108 ESMKQPFSTSE-VKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQ 166
E + + F T E + C Q+ +G+++L +HRDL N+LL+ + V+KICDFG++R
Sbjct: 129 EDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARD 188
Query: 167 -YGSP--LKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA 213
Y P ++ + + W APE + + Y+ D+WS G ++ E+ +
Sbjct: 189 IYKDPDYVRKGDARLPLKWM-APETIFD-RVYTIQSDVWSFGVLLWEIFS 236
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 62/110 (56%), Gaps = 6/110 (5%)
Query: 108 ESMKQPFSTSE-VKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQ 166
E + + F T E + C Q+ +G+++L +HRDL N+LL+ + V+KICDFG++R
Sbjct: 140 EDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARD 199
Query: 167 -YGSP--LKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA 213
Y P ++ + + W APE + + Y+ D+WS G ++ E+ +
Sbjct: 200 IYKDPDYVRKGDARLPLKWM-APETIFD-RVYTIQSDVWSFGVLLWEIFS 247
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 62/110 (56%), Gaps = 6/110 (5%)
Query: 108 ESMKQPFSTSE-VKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQ 166
E + + F T E + C Q+ +G+++L +HRDL N+LL+ + V+KICDFG++R
Sbjct: 129 EDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARD 188
Query: 167 -YGSP--LKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA 213
Y P ++ + + W APE + + Y+ D+WS G ++ E+ +
Sbjct: 189 IYKDPDYVRKGDARLPLKWM-APETIFD-RVYTIQSDVWSFGVLLWEIFS 236
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 62/110 (56%), Gaps = 6/110 (5%)
Query: 108 ESMKQPFSTSE-VKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQ 166
E + + F T E + C Q+ +G+++L +HRDL N+LL+ + V+KICDFG++R
Sbjct: 138 EDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARD 197
Query: 167 -YGSP--LKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA 213
Y P ++ + + W APE + + Y+ D+WS G ++ E+ +
Sbjct: 198 IYKDPDXVRKGDARLPLKWM-APETIFD-RVYTIQSDVWSFGVLLWEIFS 245
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 62/110 (56%), Gaps = 6/110 (5%)
Query: 108 ESMKQPFSTSE-VKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQ 166
E + + F T E + C Q+ +G+++L +HRDL N+LL+ + V+KICDFG++R
Sbjct: 138 EDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARD 197
Query: 167 -YGSP--LKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA 213
Y P ++ + + W APE + + Y+ D+WS G ++ E+ +
Sbjct: 198 IYKDPDYVRKGDARLPLKWM-APETIFD-RVYTIQSDVWSFGVLLWEIFS 245
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 62/110 (56%), Gaps = 6/110 (5%)
Query: 108 ESMKQPFSTSE-VKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQ 166
E + + F T E + C Q+ +G+++L +HRDL N+LL+ + V+KICDFG++R
Sbjct: 175 EDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARD 234
Query: 167 -YGSP--LKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA 213
Y P ++ + + W APE + + Y+ D+WS G ++ E+ +
Sbjct: 235 IYKDPDYVRKGDARLPLKWM-APETIFD-RVYTIQSDVWSFGVLLWEIFS 282
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 98/212 (46%), Gaps = 26/212 (12%)
Query: 8 RSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREI 67
R + EK K+ G +G V+ A K + VA+K +K E + L E
Sbjct: 14 RESLKLEK--KLGAGQFGEVWMATYNKHTK-VAVKTMKPGSMSVE---------AFLAEA 61
Query: 68 NILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEH----DLKWLMESMKQPFSTSEVKCLM 123
N++ + H +V + VV + +Y++ E+M D E KQP ++
Sbjct: 62 NVMKTLQHDKLVKLHAVVT--KEPIYIITEFMAKGSLLDFLKSDEGSKQPLP--KLIDFS 117
Query: 124 LQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTS---LVVT 180
Q+ EG+ ++ +HRDL+ +N+L++ V KI DFG++R YT+
Sbjct: 118 AQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIED--NEYTAREGAKFP 175
Query: 181 LWYRAPELLLGAKKYSTAVDMWSVGCIMAELL 212
+ + APE + ++ D+WS G ++ E++
Sbjct: 176 IKWTAPE-AINFGSFTIKSDVWSFGILLMEIV 206
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 100/214 (46%), Gaps = 21/214 (9%)
Query: 12 EFEKLNKISEGTYGIVYRARDKK-SGEIVALKKVKMNVGRKEDCLEYGFPISSLREINIL 70
++E I+ G G +Y A D+ +G V LK + ++ G E L E+
Sbjct: 81 QYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGL-VHSGDAEAQAMAMAERQFLAEVV-- 137
Query: 71 LSFDHPSIVNVKEVV--MDDH-DSV-YMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQL 126
HPSIV + V D H D V Y+VMEY+ + L S Q +E +L++
Sbjct: 138 ----HPSIVQIFNFVEHTDRHGDPVGYIVMEYVGG--QSLKRSKGQKLPVAEAIAYLLEI 191
Query: 127 LEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAP 186
L + YLH +++ DLK N++L + LK+ D G + S + L T ++AP
Sbjct: 192 LPALSYLHSIGLVYNDLKPENIMLTEE-QLKLIDLGAVSRINS----FGYLYGTPGFQAP 246
Query: 187 ELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSG 220
E++ + A D+++VG +A L P +G
Sbjct: 247 EIVRTGP--TVATDIYTVGRTLAALTLDLPTRNG 278
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 61/117 (52%), Gaps = 7/117 (5%)
Query: 119 VKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLN-NQGVLKICDFGMSRQYGSPLKP--YT 175
+ Q+LE V++ H+ VLHRD+K N+L++ N+G LK+ DFG G+ LK YT
Sbjct: 112 ARSFFWQVLEAVRHCHNXGVLHRDIKDENILIDLNRGELKLIDFGS----GALLKDTVYT 167
Query: 176 SLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFK 232
T Y PE + + + + +WS+G ++ +++ F E+ + F+
Sbjct: 168 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFR 224
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 61/117 (52%), Gaps = 7/117 (5%)
Query: 119 VKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLN-NQGVLKICDFGMSRQYGSPLKP--YT 175
+ Q+LE V++ H+ VLHRD+K N+L++ N+G LK+ DFG G+ LK YT
Sbjct: 117 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGS----GALLKDTVYT 172
Query: 176 SLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFK 232
T Y PE + + + + +WS+G ++ +++ F E+ + F+
Sbjct: 173 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFR 229
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 98/212 (46%), Gaps = 26/212 (12%)
Query: 8 RSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREI 67
R + EK K+ G +G V+ A K + VA+K +K E + L E
Sbjct: 187 RESLKLEK--KLGAGQFGEVWMATYNKHTK-VAVKTMKPGSMSVE---------AFLAEA 234
Query: 68 NILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEH----DLKWLMESMKQPFSTSEVKCLM 123
N++ + H +V + VV + +Y++ E+M D E KQP ++
Sbjct: 235 NVMKTLQHDKLVKLHAVVT--KEPIYIITEFMAKGSLLDFLKSDEGSKQPLP--KLIDFS 290
Query: 124 LQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTS---LVVT 180
Q+ EG+ ++ +HRDL+ +N+L++ V KI DFG++R YT+
Sbjct: 291 AQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIED--NEYTAREGAKFP 348
Query: 181 LWYRAPELLLGAKKYSTAVDMWSVGCIMAELL 212
+ + APE + ++ D+WS G ++ E++
Sbjct: 349 IKWTAPE-AINFGSFTIKSDVWSFGILLMEIV 379
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 55/96 (57%), Gaps = 5/96 (5%)
Query: 121 CLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQ-YGSP--LKPYTSL 177
C Q+ +G+++L +HRDL N+LL+ + V+KICDFG++R Y P ++ +
Sbjct: 148 CYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 207
Query: 178 VVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA 213
+ W APE + + Y+ D+WS G ++ E+ +
Sbjct: 208 LPLKWM-APETIFD-RVYTIQSDVWSFGVLLWEIFS 241
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 61/117 (52%), Gaps = 7/117 (5%)
Query: 119 VKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLN-NQGVLKICDFGMSRQYGSPLKP--YT 175
+ Q+LE V++ H+ VLHRD+K N+L++ N+G LK+ DFG G+ LK YT
Sbjct: 115 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGS----GALLKDTVYT 170
Query: 176 SLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFK 232
T Y PE + + + + +WS+G ++ +++ F E+ + F+
Sbjct: 171 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFR 227
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 61/117 (52%), Gaps = 7/117 (5%)
Query: 119 VKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLN-NQGVLKICDFGMSRQYGSPLKP--YT 175
+ Q+LE V++ H+ VLHRD+K N+L++ N+G LK+ DFG G+ LK YT
Sbjct: 116 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGS----GALLKDTVYT 171
Query: 176 SLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFK 232
T Y PE + + + + +WS+G ++ +++ F E+ + F+
Sbjct: 172 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFR 228
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 61/117 (52%), Gaps = 7/117 (5%)
Query: 119 VKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLN-NQGVLKICDFGMSRQYGSPLKP--YT 175
+ Q+LE V++ H+ VLHRD+K N+L++ N+G LK+ DFG G+ LK YT
Sbjct: 117 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGS----GALLKDTVYT 172
Query: 176 SLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFK 232
T Y PE + + + + +WS+G ++ +++ F E+ + F+
Sbjct: 173 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFR 229
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 61/117 (52%), Gaps = 7/117 (5%)
Query: 119 VKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLN-NQGVLKICDFGMSRQYGSPLKP--YT 175
+ Q+LE V++ H+ VLHRD+K N+L++ N+G LK+ DFG G+ LK YT
Sbjct: 117 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGS----GALLKDTVYT 172
Query: 176 SLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFK 232
T Y PE + + + + +WS+G ++ +++ F E+ + F+
Sbjct: 173 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFR 229
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 102/219 (46%), Gaps = 30/219 (13%)
Query: 18 KISEGTYGIVYRARDK-----KSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS 72
++ +G++G+VY K + VA+K V +E I L E +++
Sbjct: 19 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRER-------IEFLNEASVMKE 71
Query: 73 FDHPSIVNVKEVVMDDHDSVYMVMEYMEH-DLKWLMESMK---------QPFSTSEVKCL 122
F+ +V + VV ++ ++ME M DLK + S++ P S S++ +
Sbjct: 72 FNCHHVVRLLGVVSQGQPTL-VIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQM 130
Query: 123 MLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQ-YGSPL--KPYTSLVV 179
++ +G+ YL+ N +HRDL N + +KI DFGM+R Y + K L+
Sbjct: 131 AGEIADGMAYLNANKFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLP 190
Query: 180 TLWYRAPELLLGAKKYSTAVDMWSVGCIMAEL--LAKKP 216
W L G ++T D+WS G ++ E+ LA++P
Sbjct: 191 VRWMSPESLKDGV--FTTYSDVWSFGVVLWEIATLAEQP 227
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 61/117 (52%), Gaps = 7/117 (5%)
Query: 119 VKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLN-NQGVLKICDFGMSRQYGSPLKP--YT 175
+ Q+LE V++ H+ VLHRD+K N+L++ N+G LK+ DFG G+ LK YT
Sbjct: 112 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGS----GALLKDTVYT 167
Query: 176 SLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFK 232
T Y PE + + + + +WS+G ++ +++ F E+ + F+
Sbjct: 168 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFR 224
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 61/117 (52%), Gaps = 7/117 (5%)
Query: 119 VKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLN-NQGVLKICDFGMSRQYGSPLKP--YT 175
+ Q+LE V++ H+ VLHRD+K N+L++ N+G LK+ DFG G+ LK YT
Sbjct: 131 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGS----GALLKDTVYT 186
Query: 176 SLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFK 232
T Y PE + + + + +WS+G ++ +++ F E+ + F+
Sbjct: 187 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFR 243
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 61/117 (52%), Gaps = 7/117 (5%)
Query: 119 VKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLN-NQGVLKICDFGMSRQYGSPLKP--YT 175
+ Q+LE V++ H+ VLHRD+K N+L++ N+G LK+ DFG G+ LK YT
Sbjct: 132 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGS----GALLKDTVYT 187
Query: 176 SLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFK 232
T Y PE + + + + +WS+G ++ +++ F E+ + F+
Sbjct: 188 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFR 244
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 61/117 (52%), Gaps = 7/117 (5%)
Query: 119 VKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLN-NQGVLKICDFGMSRQYGSPLKP--YT 175
+ Q+LE V++ H+ VLHRD+K N+L++ N+G LK+ DFG G+ LK YT
Sbjct: 132 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGS----GALLKDTVYT 187
Query: 176 SLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFK 232
T Y PE + + + + +WS+G ++ +++ F E+ + F+
Sbjct: 188 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFR 244
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 61/117 (52%), Gaps = 7/117 (5%)
Query: 119 VKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLN-NQGVLKICDFGMSRQYGSPLKP--YT 175
+ Q+LE V++ H+ VLHRD+K N+L++ N+G LK+ DFG G+ LK YT
Sbjct: 132 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGS----GALLKDTVYT 187
Query: 176 SLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFK 232
T Y PE + + + + +WS+G ++ +++ F E+ + F+
Sbjct: 188 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFR 244
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 61/117 (52%), Gaps = 7/117 (5%)
Query: 119 VKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLN-NQGVLKICDFGMSRQYGSPLKP--YT 175
+ Q+LE V++ H+ VLHRD+K N+L++ N+G LK+ DFG G+ LK YT
Sbjct: 159 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGS----GALLKDTVYT 214
Query: 176 SLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFK 232
T Y PE + + + + +WS+G ++ +++ F E+ + F+
Sbjct: 215 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFR 271
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 61/117 (52%), Gaps = 7/117 (5%)
Query: 119 VKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLN-NQGVLKICDFGMSRQYGSPLKP--YT 175
+ Q+LE V++ H+ VLHRD+K N+L++ N+G LK+ DFG G+ LK YT
Sbjct: 139 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGS----GALLKDTVYT 194
Query: 176 SLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFK 232
T Y PE + + + + +WS+G ++ +++ F E+ + F+
Sbjct: 195 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFR 251
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 61/117 (52%), Gaps = 7/117 (5%)
Query: 119 VKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLN-NQGVLKICDFGMSRQYGSPLKP--YT 175
+ Q+LE V++ H+ VLHRD+K N+L++ N+G LK+ DFG G+ LK YT
Sbjct: 131 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGS----GALLKDTVYT 186
Query: 176 SLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFK 232
T Y PE + + + + +WS+G ++ +++ F E+ + F+
Sbjct: 187 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFR 243
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 61/117 (52%), Gaps = 7/117 (5%)
Query: 119 VKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLN-NQGVLKICDFGMSRQYGSPLKP--YT 175
+ Q+LE V++ H+ VLHRD+K N+L++ N+G LK+ DFG G+ LK YT
Sbjct: 151 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGS----GALLKDTVYT 206
Query: 176 SLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFK 232
T Y PE + + + + +WS+G ++ +++ F E+ + F+
Sbjct: 207 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFR 263
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 61/117 (52%), Gaps = 7/117 (5%)
Query: 119 VKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLN-NQGVLKICDFGMSRQYGSPLKP--YT 175
+ Q+LE V++ H+ VLHRD+K N+L++ N+G LK+ DFG G+ LK YT
Sbjct: 159 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGS----GALLKDTVYT 214
Query: 176 SLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFK 232
T Y PE + + + + +WS+G ++ +++ F E+ + F+
Sbjct: 215 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFR 271
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 61/117 (52%), Gaps = 7/117 (5%)
Query: 119 VKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLN-NQGVLKICDFGMSRQYGSPLKP--YT 175
+ Q+LE V++ H+ VLHRD+K N+L++ N+G LK+ DFG G+ LK YT
Sbjct: 144 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGS----GALLKDTVYT 199
Query: 176 SLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFK 232
T Y PE + + + + +WS+G ++ +++ F E+ + F+
Sbjct: 200 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFR 256
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 61/117 (52%), Gaps = 7/117 (5%)
Query: 119 VKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLN-NQGVLKICDFGMSRQYGSPLKP--YT 175
+ Q+LE V++ H+ VLHRD+K N+L++ N+G LK+ DFG G+ LK YT
Sbjct: 164 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGS----GALLKDTVYT 219
Query: 176 SLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFK 232
T Y PE + + + + +WS+G ++ +++ F E+ + F+
Sbjct: 220 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFR 276
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 58/109 (53%), Gaps = 7/109 (6%)
Query: 119 VKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLN-NQGVLKICDFGMSRQYGSPLKP--YT 175
+ Q+LE V++ H+ VLHRD+K N+L++ N+G LK+ DFG G+ LK YT
Sbjct: 112 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGS----GALLKDTVYT 167
Query: 176 SLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEV 224
T Y PE + + + + +WS+G ++ +++ F E+
Sbjct: 168 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 216
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 61/117 (52%), Gaps = 7/117 (5%)
Query: 119 VKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLN-NQGVLKICDFGMSRQYGSPLKP--YT 175
+ Q+LE V++ H+ VLHRD+K N+L++ N+G LK+ DFG G+ LK YT
Sbjct: 159 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGS----GALLKDTVYT 214
Query: 176 SLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFK 232
T Y PE + + + + +WS+G ++ +++ F E+ + F+
Sbjct: 215 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFR 271
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 106/236 (44%), Gaps = 40/236 (16%)
Query: 8 RSVFEFEKLNKISEGTYGIVYRARD---KKSGEIVALKKVKMNVGRKEDCLEYGFPISSL 64
R EF K+ + G +G V A K+G + + VKM + K D E +S L
Sbjct: 44 RENLEFGKV--LGSGAFGKVMNATAYGISKTGVSIQVA-VKM-LKEKADSSEREALMSEL 99
Query: 65 REINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEH-DLKWLMESMKQPFSTSEVK--- 120
+ + L S H +IVN+ +Y++ EY + DL + S ++ FS E++
Sbjct: 100 KMMTQLGS--HENIVNLLGACTLS-GPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYEN 156
Query: 121 -------------------CLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDF 161
C Q+ +G+++L +HRDL N+L+ + V+KICDF
Sbjct: 157 QKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDF 216
Query: 162 GMSRQYGSP----LKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA 213
G++R S ++ L V + APE L Y+ D+WS G ++ E+ +
Sbjct: 217 GLARDIMSDSNYVVRGNARLPVK--WMAPESLFEG-IYTIKSDVWSYGILLWEIFS 269
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 58/109 (53%), Gaps = 7/109 (6%)
Query: 119 VKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLN-NQGVLKICDFGMSRQYGSPLKP--YT 175
+ Q+LE V++ H+ VLHRD+K N+L++ N+G LK+ DFG G+ LK YT
Sbjct: 144 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGS----GALLKDTVYT 199
Query: 176 SLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEV 224
T Y PE + + + + +WS+G ++ +++ F E+
Sbjct: 200 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 248
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 58/109 (53%), Gaps = 7/109 (6%)
Query: 119 VKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLN-NQGVLKICDFGMSRQYGSPLKP--YT 175
+ Q+LE V++ H+ VLHRD+K N+L++ N+G LK+ DFG G+ LK YT
Sbjct: 145 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGS----GALLKDTVYT 200
Query: 176 SLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEV 224
T Y PE + + + + +WS+G ++ +++ F E+
Sbjct: 201 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 249
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 58/109 (53%), Gaps = 7/109 (6%)
Query: 119 VKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLN-NQGVLKICDFGMSRQYGSPLKP--YT 175
+ Q+LE V++ H+ VLHRD+K N+L++ N+G LK+ DFG G+ LK YT
Sbjct: 145 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGS----GALLKDTVYT 200
Query: 176 SLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEV 224
T Y PE + + + + +WS+G ++ +++ F E+
Sbjct: 201 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 249
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 58/109 (53%), Gaps = 7/109 (6%)
Query: 119 VKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLN-NQGVLKICDFGMSRQYGSPLKP--YT 175
+ Q+LE V++ H+ VLHRD+K N+L++ N+G LK+ DFG G+ LK YT
Sbjct: 145 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGS----GALLKDTVYT 200
Query: 176 SLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEV 224
T Y PE + + + + +WS+G ++ +++ F E+
Sbjct: 201 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 249
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 58/109 (53%), Gaps = 7/109 (6%)
Query: 119 VKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLN-NQGVLKICDFGMSRQYGSPLKP--YT 175
+ Q+LE V++ H+ VLHRD+K N+L++ N+G LK+ DFG G+ LK YT
Sbjct: 145 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGS----GALLKDTVYT 200
Query: 176 SLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEV 224
T Y PE + + + + +WS+G ++ +++ F E+
Sbjct: 201 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 249
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 58/109 (53%), Gaps = 7/109 (6%)
Query: 119 VKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLN-NQGVLKICDFGMSRQYGSPLKP--YT 175
+ Q+LE V++ H+ VLHRD+K N+L++ N+G LK+ DFG G+ LK YT
Sbjct: 144 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGS----GALLKDTVYT 199
Query: 176 SLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEV 224
T Y PE + + + + +WS+G ++ +++ F E+
Sbjct: 200 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 248
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 58/109 (53%), Gaps = 7/109 (6%)
Query: 119 VKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLN-NQGVLKICDFGMSRQYGSPLKP--YT 175
+ Q+LE V++ H+ VLHRD+K N+L++ N+G LK+ DFG G+ LK YT
Sbjct: 144 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGS----GALLKDTVYT 199
Query: 176 SLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEV 224
T Y PE + + + + +WS+G ++ +++ F E+
Sbjct: 200 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 248
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 98/218 (44%), Gaps = 31/218 (14%)
Query: 19 ISEGTYGIVYRAR----DKKSGEIVALKKVKMNVGRKEDCLEYGFP--ISSLREINILLS 72
+ EG +G V A DK V VKM K D E IS + + ++
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKM---LKSDATEKDLSDLISEMEMMKMI-- 90
Query: 73 FDHPSIVNVKEVVMDDHDSVYMVMEYM-EHDLKWLMESMKQP---------------FST 116
H +I+N+ D +Y+++EY + +L+ +++ + P S+
Sbjct: 91 GKHKNIINLLGACTQD-GPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSS 149
Query: 117 SEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSR--QYGSPLKPY 174
++ Q+ G++YL +HRDL N+L+ V+KI DFG++R + K
Sbjct: 150 KDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKT 209
Query: 175 TSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELL 212
T+ + + + APE L + Y+ D+WS G ++ E+
Sbjct: 210 TNGRLPVKWMAPEALFD-RIYTHQSDVWSFGVLLWEIF 246
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 80/152 (52%), Gaps = 9/152 (5%)
Query: 71 LSF-DHPSIVNVKEVVMDDHDSVYMVMEYMEH-DLKWLMESMKQP---FSTSEVKCLMLQ 125
LSF HP +V++ D+ + + ++ +YME+ +LK + P S + + +
Sbjct: 89 LSFCRHPHLVSLIGFC-DERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIG 147
Query: 126 LLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVV--TLWY 183
G+ YLH ++HRD+K+ N+LL+ V KI DFG+S++ + + VV TL Y
Sbjct: 148 AARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGY 207
Query: 184 RAPELLLGAKKYSTAVDMWSVGCIMAELLAKK 215
PE + + + D++S G ++ E+L +
Sbjct: 208 IDPEYFIKG-RLTEKSDVYSFGVVLFEVLCAR 238
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 100/217 (46%), Gaps = 30/217 (13%)
Query: 16 LNKISEGTYGIVYRAR-----DKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINIL 70
+ + G +G VY + + S VA+K + V ++D L++ L E I+
Sbjct: 35 IRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLP-EVCSEQDELDF------LMEALII 87
Query: 71 LSFDHPSIVNVKEVVMDDHDSVYMVMEYMEH-DLK-WLMESMKQPFSTSEVKCLMLQLLE 128
F+H +IV V + +++ME M DLK +L E+ +P S + ML LL
Sbjct: 88 SKFNHQNIVRCIGVSLQSLPR-FILMELMAGGDLKSFLRETRPRPSQPSSLA--MLDLLH 144
Query: 129 -------GVKYLHDNWVLHRDLKTSNLLLNNQG---VLKICDFGMSRQY--GSPLKPYTS 176
G +YL +N +HRD+ N LL G V KI DFGM+R S +
Sbjct: 145 VARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGC 204
Query: 177 LVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA 213
++ + + PE + +++ D WS G ++ E+ +
Sbjct: 205 AMLPVKWMPPEAFMEG-IFTSKTDTWSFGVLLWEIFS 240
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 58/109 (53%), Gaps = 4/109 (3%)
Query: 108 ESMKQPFSTSE-VKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQ 166
E + + F T E + C Q+ +G+++L +HRDL N+LL+ + V+KICDFG++R
Sbjct: 138 EDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARD 197
Query: 167 YGSPLKPYT--SLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA 213
+ L + APE + + Y+ D+WS G ++ E+ +
Sbjct: 198 IXKDPDXVRKGDARLPLKWMAPETIFD-RVYTIQSDVWSFGVLLWEIFS 245
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 96/217 (44%), Gaps = 30/217 (13%)
Query: 16 LNKISEGTYGIVYRAR-----DKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINIL 70
+ + G +G VY + + S VA+K + V ++D L++ L E I+
Sbjct: 76 IRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLP-EVCSEQDELDF------LMEALII 128
Query: 71 LSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLK-WLMESMKQPFSTSEVKCLMLQLLE- 128
F+H +IV V + ++ DLK +L E+ +P S + ML LL
Sbjct: 129 SKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLA--MLDLLHV 186
Query: 129 ------GVKYLHDNWVLHRDLKTSNLLLNNQG---VLKICDFGMSR---QYGSPLKPYTS 176
G +YL +N +HRD+ N LL G V KI DFGM+R + G K +
Sbjct: 187 ARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCA 246
Query: 177 LVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA 213
++ W + G +++ D WS G ++ E+ +
Sbjct: 247 MLPVKWMPPEAFMEGI--FTSKTDTWSFGVLLWEIFS 281
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 58/109 (53%), Gaps = 4/109 (3%)
Query: 108 ESMKQPFSTSE-VKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQ 166
E + + F T E + C Q+ +G+++L +HRDL N+LL+ + V+KICDFG++R
Sbjct: 129 EDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARD 188
Query: 167 YGSPLKPYT--SLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA 213
+ L + APE + + Y+ D+WS G ++ E+ +
Sbjct: 189 IXKDPDXVRKGDARLPLKWMAPETIFD-RVYTIQSDVWSFGVLLWEIFS 236
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 58/109 (53%), Gaps = 4/109 (3%)
Query: 108 ESMKQPFSTSE-VKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQ 166
E + + F T E + C Q+ +G+++L +HRDL N+LL+ + V+KICDFG++R
Sbjct: 129 EDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARD 188
Query: 167 YGSPLKPYT--SLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA 213
+ L + APE + + Y+ D+WS G ++ E+ +
Sbjct: 189 IXKDPDXVRKGDARLPLKWMAPETIFD-RVYTIQSDVWSFGVLLWEIFS 236
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 100/217 (46%), Gaps = 30/217 (13%)
Query: 16 LNKISEGTYGIVYRAR-----DKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINIL 70
+ + G +G VY + + S VA+K + V ++D L++ L E I+
Sbjct: 50 IRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLP-EVCSEQDELDF------LMEALII 102
Query: 71 LSFDHPSIVNVKEVVMDDHDSVYMVMEYMEH-DLK-WLMESMKQPFSTSEVKCLMLQLLE 128
F+H +IV V + +++ME M DLK +L E+ +P S + ML LL
Sbjct: 103 SKFNHQNIVRCIGVSLQSLPR-FILMELMAGGDLKSFLRETRPRPSQPSSLA--MLDLLH 159
Query: 129 -------GVKYLHDNWVLHRDLKTSNLLLNNQG---VLKICDFGMSRQY--GSPLKPYTS 176
G +YL +N +HRD+ N LL G V KI DFGM+R S +
Sbjct: 160 VARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGC 219
Query: 177 LVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA 213
++ + + PE + +++ D WS G ++ E+ +
Sbjct: 220 AMLPVKWMPPEAFM-EGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 58/109 (53%), Gaps = 4/109 (3%)
Query: 108 ESMKQPFSTSE-VKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQ 166
E + + F T E + C Q+ +G+++L +HRDL N+LL+ + V+KICDFG++R
Sbjct: 138 EDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARD 197
Query: 167 YGSPLKPYT--SLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA 213
+ L + APE + + Y+ D+WS G ++ E+ +
Sbjct: 198 IXKDPDXVRKGDARLPLKWMAPETIFD-RVYTIQSDVWSFGVLLWEIFS 245
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 96/217 (44%), Gaps = 30/217 (13%)
Query: 16 LNKISEGTYGIVYRAR-----DKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINIL 70
+ + G +G VY + + S VA+K + V ++D L++ L E I+
Sbjct: 53 IRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLP-EVCSEQDELDF------LMEALII 105
Query: 71 LSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLK-WLMESMKQPFSTSEVKCLMLQLLE- 128
F+H +IV V + ++ DLK +L E+ +P S + ML LL
Sbjct: 106 SKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLA--MLDLLHV 163
Query: 129 ------GVKYLHDNWVLHRDLKTSNLLLNNQG---VLKICDFGMSR---QYGSPLKPYTS 176
G +YL +N +HRD+ N LL G V KI DFGM+R + G K +
Sbjct: 164 ARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCA 223
Query: 177 LVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA 213
++ W + G +++ D WS G ++ E+ +
Sbjct: 224 MLPVKWMPPEAFMEGI--FTSKTDTWSFGVLLWEIFS 258
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 102/222 (45%), Gaps = 37/222 (16%)
Query: 19 ISEGTYGIVYRA------RDK-KSGEIVALKKVKMNVGRKEDCLEYGFPISSL-REINIL 70
+ EG +G V A +DK K VA+K +K + K+ +S L E+ ++
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKD--------LSDLVSEMEMM 94
Query: 71 -LSFDHPSIVNVKEVVMDDHDSVYMVMEYM-EHDLKWLMESMKQP--------------- 113
+ H +I+N+ D +Y+++EY + +L+ + + + P
Sbjct: 95 KMIGKHKNIINLLGACTQDG-PLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQ 153
Query: 114 FSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGS--PL 171
+ ++ QL G++YL +HRDL N+L+ V+KI DFG++R +
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXX 213
Query: 172 KPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA 213
K T+ + + + APE L + Y+ D+WS G +M E+
Sbjct: 214 KKTTNGRLPVKWMAPEALFD-RVYTHQSDVWSFGVLMWEIFT 254
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 102/222 (45%), Gaps = 37/222 (16%)
Query: 19 ISEGTYGIVYRA------RDK-KSGEIVALKKVKMNVGRKEDCLEYGFPISSL-REINIL 70
+ EG +G V A +DK K VA+K +K + K+ +S L E+ ++
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKD--------LSDLVSEMEMM 94
Query: 71 -LSFDHPSIVNVKEVVMDDHDSVYMVMEYM-EHDLKWLMESMKQP--------------- 113
+ H +I+N+ D +Y+++EY + +L+ + + + P
Sbjct: 95 KMIGKHKNIINLLGACTQDG-PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 114 FSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGS--PL 171
+ ++ QL G++YL +HRDL N+L+ V+KI DFG++R +
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXX 213
Query: 172 KPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA 213
K T+ + + + APE L + Y+ D+WS G +M E+
Sbjct: 214 KKTTNGRLPVKWMAPEALFD-RVYTHQSDVWSFGVLMWEIFT 254
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 80/152 (52%), Gaps = 9/152 (5%)
Query: 71 LSF-DHPSIVNVKEVVMDDHDSVYMVMEYMEH-DLKWLMESMKQP---FSTSEVKCLMLQ 125
LSF HP +V++ D+ + + ++ +YME+ +LK + P S + + +
Sbjct: 89 LSFCRHPHLVSLIGFC-DERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIG 147
Query: 126 LLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVV--TLWY 183
G+ YLH ++HRD+K+ N+LL+ V KI DFG+S++ + + VV TL Y
Sbjct: 148 AARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGY 207
Query: 184 RAPELLLGAKKYSTAVDMWSVGCIMAELLAKK 215
PE + + + D++S G ++ E+L +
Sbjct: 208 IDPEYFIKG-RLTEKSDVYSFGVVLFEVLCAR 238
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 82/180 (45%), Gaps = 10/180 (5%)
Query: 60 PISSLREINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHD--LKWLMESMKQPFSTS 117
P + L+E ++ H +V + VV + + +V EYM L +L +
Sbjct: 47 PEAFLQEAQVMKKLRHEKLVQLYAVV--SEEPIXIVTEYMSKGSLLDFLKGETGKYLRLP 104
Query: 118 EVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQY-GSPLKPYTS 176
++ + Q+ G+ Y+ +HRDL+ +N+L+ V K+ DFG++R +
Sbjct: 105 QLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQG 164
Query: 177 LVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKK----PLFSGTTEVDQIDKIFK 232
+ + APE L +++ D+WS G ++ EL K P +DQ+++ ++
Sbjct: 165 AKFPIKWTAPEAALYG-RFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYR 223
>pdb|4HGL|A Chain A, Crystal Structure Of Ck1g3 With Compound 1
pdb|4HGS|A Chain A, Crystal Structure Of Ck1gs With Compound 13
Length = 330
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 120/280 (42%), Gaps = 39/280 (13%)
Query: 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGF--PISSLREINIL 70
F KI G +G + ++ + E VA+K M + LEY F + S I +
Sbjct: 11 FRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHLEYRFYKQLGSGDGIPQV 70
Query: 71 LSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGV 130
F N MV+E + L+ L + + FS V + +QL+ +
Sbjct: 71 YYFGPCGKYNA------------MVLELLGPSLEDLFDLCDRTFSLKTVLMIAIQLISRM 118
Query: 131 KYLHDNWVLHRDLKTSNLLLNNQG-----VLKICDFGMSRQYGS-------PLKPYTSLV 178
+Y+H +++RD+K N L+ G V+ I DFG++++Y P + + SL
Sbjct: 119 EYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFGLAKEYIDPETKKHIPYREHKSLT 178
Query: 179 VTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLG--- 235
T Y + LG K+ S D+ ++G + L + G + D + + ++ +G
Sbjct: 179 GTARYMSINTHLG-KEQSRRDDLEALGHMFMYFLRGSLPWQG-LKADTLKERYQKIGDTK 236
Query: 236 --TPTETIWPGLSELPG-----AKANFAKQP-YNLLRKRF 267
TP E + E+ + +F ++P Y+ LRK F
Sbjct: 237 RATPIEVLCENFPEMATYLRYVRRLDFFEKPDYDYLRKLF 276
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 100/220 (45%), Gaps = 33/220 (15%)
Query: 19 ISEGTYGIVYRA------RDK-KSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILL 71
+ EG +G V A +DK K VA+K +K + +ED + + ++ I
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLK-DDATEEDLSDLVSEMEMMKMIG--- 98
Query: 72 SFDHPSIVNVKEVVMDDHDSVYMVMEYM-EHDLKWLMESMKQP---------------FS 115
H +I+N+ D +Y+++EY + +L+ + + + P +
Sbjct: 99 --KHKNIINLLGACTQDG-PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMT 155
Query: 116 TSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSP--LKP 173
++ QL G++YL +HRDL N+L+ V+KI DFG++R + K
Sbjct: 156 FKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 215
Query: 174 YTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA 213
T+ + + + APE L + Y+ D+WS G +M E+
Sbjct: 216 TTNGRLPVKWMAPEALFD-RVYTHQSDVWSFGVLMWEIFT 254
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 98/219 (44%), Gaps = 31/219 (14%)
Query: 19 ISEGTYGIVYRAR----DKKSGEIVALKKVKMNVGRKEDCLEYGFP--ISSLREINILLS 72
+ EG +G V A DK V VKM K D E IS + + ++
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKM---LKSDATEKDLSDLISEMEMMKMI-- 131
Query: 73 FDHPSIVNVKEVVMDDHDSVYMVMEYM-EHDLKWLMESMKQP---------------FST 116
H +I+N+ D +Y+++EY + +L+ +++ + P S+
Sbjct: 132 GKHKNIINLLGACTQD-GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSS 190
Query: 117 SEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSR--QYGSPLKPY 174
++ Q+ G++YL +HRDL N+L+ V+KI DFG++R + K
Sbjct: 191 KDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 250
Query: 175 TSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA 213
T+ + + + APE L + Y+ D+WS G ++ E+
Sbjct: 251 TNGRLPVKWMAPEALFD-RIYTHQSDVWSFGVLLWEIFT 288
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 60/128 (46%), Gaps = 3/128 (2%)
Query: 111 KQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLN-NQGVLKICDFGMSRQYGS 169
K P +C Q++ +++ H V+HRD+K N+L++ +G K+ DFG
Sbjct: 133 KGPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHD 192
Query: 170 PLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDK 229
+PYT T Y PE + + ++ +WS+G ++ +++ F E+ + +
Sbjct: 193 --EPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQEILEAEL 250
Query: 230 IFKTLGTP 237
F +P
Sbjct: 251 HFPAHVSP 258
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 101/222 (45%), Gaps = 37/222 (16%)
Query: 19 ISEGTYGIVYRA------RDK-KSGEIVALKKVKMNVGRKEDCLEYGFPISSL-REINIL 70
+ EG +G V A +DK K VA+K +K + K+ +S L E+ ++
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKD--------LSDLVSEMEMM 140
Query: 71 -LSFDHPSIVNVKEVVMDDHDSVYMVMEYMEH-DLKWLMESMKQP--------------- 113
+ H +I+N+ D +Y+++EY +L+ + + + P
Sbjct: 141 KMIGKHKNIINLLGACTQD-GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 199
Query: 114 FSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSP--L 171
+ ++ QL G++YL +HRDL N+L+ V+KI DFG++R +
Sbjct: 200 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYY 259
Query: 172 KPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA 213
K T+ + + + APE L + Y+ D+WS G +M E+
Sbjct: 260 KKTTNGRLPVKWMAPEALFD-RVYTHQSDVWSFGVLMWEIFT 300
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.136 0.415
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,298,331
Number of Sequences: 62578
Number of extensions: 425210
Number of successful extensions: 4314
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1095
Number of HSP's successfully gapped in prelim test: 28
Number of HSP's that attempted gapping in prelim test: 891
Number of HSP's gapped (non-prelim): 1401
length of query: 332
length of database: 14,973,337
effective HSP length: 99
effective length of query: 233
effective length of database: 8,778,115
effective search space: 2045300795
effective search space used: 2045300795
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.6 bits)