Query 035861
Match_columns 332
No_of_seqs 161 out of 2323
Neff 10.5
Searched_HMMs 46136
Date Fri Mar 29 07:05:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/035861.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/035861hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0663 Protein kinase PITSLRE 100.0 1.2E-60 2.7E-65 389.6 26.5 316 4-331 69-386 (419)
2 KOG0615 Serine/threonine prote 100.0 7.5E-59 1.6E-63 388.8 14.7 283 9-328 170-459 (475)
3 KOG0661 MAPK related serine/th 100.0 6.9E-58 1.5E-62 389.3 18.5 295 5-315 4-300 (538)
4 KOG0575 Polo-like serine/threo 100.0 2.1E-56 4.6E-61 391.5 24.8 274 11-328 18-292 (592)
5 KOG0659 Cdk activating kinase 100.0 4.1E-56 8.9E-61 352.6 23.6 293 11-319 2-294 (318)
6 KOG0581 Mitogen-activated prot 100.0 1.3E-56 2.7E-61 372.3 19.3 265 9-318 77-347 (364)
7 KOG0598 Ribosomal protein S6 k 100.0 2.6E-56 5.6E-61 370.3 19.6 279 8-329 22-306 (357)
8 KOG0600 Cdc2-related protein k 100.0 1.8E-55 3.9E-60 377.1 24.9 309 5-328 111-422 (560)
9 KOG0593 Predicted protein kina 100.0 2.7E-56 5.9E-61 359.8 14.8 289 10-313 1-291 (396)
10 KOG0616 cAMP-dependent protein 100.0 1.2E-53 2.7E-58 343.4 18.2 272 8-326 41-319 (355)
11 KOG0594 Protein kinase PCTAIRE 100.0 4E-52 8.7E-57 345.0 27.6 294 10-317 10-313 (323)
12 KOG0605 NDR and related serine 100.0 6.2E-53 1.3E-57 364.4 23.0 279 9-328 139-467 (550)
13 KOG0592 3-phosphoinositide-dep 100.0 3.2E-53 6.8E-58 366.2 21.2 268 7-319 69-351 (604)
14 cd07871 STKc_PCTAIRE3 Catalyti 100.0 4.6E-51 9.9E-56 352.3 27.5 286 9-309 3-288 (288)
15 KOG0583 Serine/threonine prote 100.0 2.1E-51 4.7E-56 359.9 25.3 262 8-311 14-280 (370)
16 cd07869 STKc_PFTAIRE1 Catalyti 100.0 1.4E-50 3E-55 351.9 26.7 290 10-313 4-295 (303)
17 KOG0591 NIMA (never in mitosis 100.0 5.1E-53 1.1E-57 337.7 10.2 261 6-313 14-283 (375)
18 KOG0595 Serine/threonine-prote 100.0 5.1E-51 1.1E-55 341.9 22.1 266 6-314 5-276 (429)
19 KOG0694 Serine/threonine prote 100.0 1.5E-51 3.2E-56 365.3 19.3 279 7-330 364-650 (694)
20 KOG0578 p21-activated serine/t 100.0 1.1E-51 2.4E-56 359.1 17.6 259 10-313 272-530 (550)
21 KOG0660 Mitogen-activated prot 100.0 4.2E-51 9E-56 338.1 19.0 296 10-320 21-324 (359)
22 KOG0588 Serine/threonine prote 100.0 4.3E-51 9.4E-56 360.3 20.1 265 9-318 10-275 (786)
23 KOG0597 Serine-threonine prote 100.0 5.2E-51 1.1E-55 353.7 17.3 257 10-312 1-257 (808)
24 KOG0658 Glycogen synthase kina 100.0 1E-50 2.2E-55 336.3 18.0 285 10-317 23-317 (364)
25 cd07872 STKc_PCTAIRE2 Catalyti 100.0 1.9E-49 4.1E-54 345.6 25.3 291 8-313 3-293 (309)
26 cd07845 STKc_CDK10 Catalytic d 100.0 1.7E-48 3.7E-53 339.7 29.2 306 6-325 2-309 (309)
27 cd05571 STKc_PKB Catalytic dom 100.0 1.2E-49 2.5E-54 348.8 21.1 257 17-317 1-262 (323)
28 cd05612 STKc_PRKX_like Catalyt 100.0 1.5E-49 3.3E-54 343.2 21.1 259 11-316 1-264 (291)
29 KOG0198 MEKK and related serin 100.0 7.1E-50 1.5E-54 337.1 18.4 261 11-314 17-284 (313)
30 PTZ00263 protein kinase A cata 100.0 1.7E-49 3.8E-54 348.5 21.2 264 6-316 13-281 (329)
31 cd07873 STKc_PCTAIRE1 Catalyti 100.0 1.8E-48 4E-53 338.2 27.1 291 7-313 2-293 (301)
32 cd07848 STKc_CDKL5 Catalytic d 100.0 7.3E-49 1.6E-53 338.5 24.2 286 11-309 1-287 (287)
33 cd07859 STKc_TDY_MAPK_plant Ca 100.0 1E-48 2.2E-53 345.4 24.7 294 12-318 1-302 (338)
34 KOG0610 Putative serine/threon 100.0 6.5E-49 1.4E-53 329.5 21.8 282 6-329 72-415 (459)
35 KOG0582 Ste20-like serine/thre 100.0 5.5E-49 1.2E-53 332.7 21.3 275 5-314 20-301 (516)
36 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 6E-49 1.3E-53 345.9 22.1 278 11-327 1-278 (333)
37 PTZ00426 cAMP-dependent protei 100.0 6E-49 1.3E-53 345.9 21.7 274 7-327 26-307 (340)
38 KOG0662 Cyclin-dependent kinas 100.0 1.6E-48 3.4E-53 293.1 20.2 288 11-313 2-290 (292)
39 cd05595 STKc_PKB_beta Catalyti 100.0 8.8E-49 1.9E-53 343.1 21.8 268 17-328 1-275 (323)
40 KOG0585 Ca2+/calmodulin-depend 100.0 2.8E-49 6.1E-54 336.6 17.9 273 4-312 90-378 (576)
41 cd05631 STKc_GRK4 Catalytic do 100.0 1.1E-48 2.4E-53 336.9 21.7 275 12-327 1-284 (285)
42 cd05593 STKc_PKB_gamma Catalyt 100.0 1.1E-48 2.4E-53 343.1 21.5 269 17-329 1-276 (328)
43 cd05590 STKc_nPKC_eta Catalyti 100.0 2.8E-48 6E-53 339.6 22.8 268 17-328 1-277 (320)
44 cd05587 STKc_cPKC Catalytic do 100.0 3.9E-48 8.5E-53 339.4 23.4 262 12-317 1-268 (324)
45 cd07861 STKc_CDK1_euk Catalyti 100.0 1.6E-47 3.6E-52 329.7 26.2 283 12-309 1-285 (285)
46 cd05628 STKc_NDR1 Catalytic do 100.0 5.2E-48 1.1E-52 343.6 23.8 269 11-320 1-307 (363)
47 cd07839 STKc_CDK5 Catalytic do 100.0 1.3E-47 2.8E-52 330.2 25.3 283 12-309 1-284 (284)
48 KOG0033 Ca2+/calmodulin-depend 100.0 5.2E-50 1.1E-54 314.6 9.3 264 7-313 7-274 (355)
49 cd05573 STKc_ROCK_NDR_like Cat 100.0 1.5E-48 3.3E-53 345.9 20.0 276 11-327 1-306 (350)
50 cd07862 STKc_CDK6 Catalytic do 100.0 2.3E-47 5E-52 329.7 26.8 281 11-309 1-290 (290)
51 cd05599 STKc_NDR_like Catalyti 100.0 3E-48 6.5E-53 345.7 21.8 276 11-327 1-317 (364)
52 cd05585 STKc_YPK1_like Catalyt 100.0 4.7E-48 1E-52 337.1 22.5 252 19-314 1-255 (312)
53 KOG0580 Serine/threonine prote 100.0 4.6E-49 1E-53 308.1 14.1 261 5-311 16-278 (281)
54 PTZ00036 glycogen synthase kin 100.0 1.3E-47 2.9E-52 348.0 25.3 284 11-315 66-360 (440)
55 KOG0192 Tyrosine kinase specif 100.0 1.2E-47 2.6E-52 333.3 23.5 255 9-306 39-299 (362)
56 cd05591 STKc_nPKC_epsilon Cata 100.0 9E-48 1.9E-52 336.7 22.4 257 17-317 1-265 (321)
57 cd05594 STKc_PKB_alpha Catalyt 100.0 3.7E-48 8.1E-53 339.7 19.8 268 17-328 1-276 (325)
58 cd07875 STKc_JNK1 Catalytic do 100.0 4.1E-47 8.9E-52 338.2 26.5 300 9-319 22-331 (364)
59 cd07843 STKc_CDC2L1 Catalytic 100.0 6.7E-47 1.5E-51 327.2 26.9 291 7-309 1-293 (293)
60 cd07876 STKc_JNK2 Catalytic do 100.0 2.5E-47 5.5E-52 339.0 24.8 298 8-316 18-325 (359)
61 cd05589 STKc_PKN Catalytic dom 100.0 1.5E-47 3.3E-52 335.6 23.0 258 13-315 1-266 (324)
62 KOG0599 Phosphorylase kinase g 100.0 3.5E-49 7.7E-54 314.6 11.2 273 10-318 16-295 (411)
63 cd05616 STKc_cPKC_beta Catalyt 100.0 1.5E-47 3.3E-52 335.5 22.3 262 12-317 1-268 (323)
64 cd05629 STKc_NDR_like_fungal C 100.0 9.7E-48 2.1E-52 343.7 21.1 276 11-327 1-326 (377)
65 cd05592 STKc_nPKC_theta_delta 100.0 2.5E-47 5.3E-52 333.0 22.9 267 17-327 1-271 (316)
66 KOG0667 Dual-specificity tyros 100.0 9.8E-48 2.1E-52 340.4 20.4 297 4-314 179-510 (586)
67 cd05596 STKc_ROCK Catalytic do 100.0 2.7E-47 6E-52 339.3 23.3 279 8-326 40-326 (370)
68 cd05570 STKc_PKC Catalytic dom 100.0 2.8E-47 6E-52 333.1 22.7 255 17-315 1-261 (318)
69 cd05626 STKc_LATS2 Catalytic d 100.0 3.2E-47 7E-52 340.6 23.6 265 12-316 2-315 (381)
70 cd05620 STKc_nPKC_delta Cataly 100.0 3.4E-47 7.3E-52 332.1 23.1 256 17-316 1-258 (316)
71 cd05608 STKc_GRK1 Catalytic do 100.0 4.6E-47 9.9E-52 326.0 23.5 260 19-318 1-269 (280)
72 KOG0201 Serine/threonine prote 100.0 1.3E-49 2.9E-54 336.0 7.5 257 12-313 14-270 (467)
73 KOG0690 Serine/threonine prote 100.0 4.5E-49 9.8E-54 321.2 10.3 280 8-331 165-451 (516)
74 cd05601 STKc_CRIK Catalytic do 100.0 9.3E-48 2E-52 338.0 19.4 276 11-326 1-283 (330)
75 cd05575 STKc_SGK Catalytic dom 100.0 1.6E-47 3.4E-52 335.4 20.5 257 17-317 1-262 (323)
76 PHA03212 serine/threonine kina 100.0 3.5E-47 7.5E-52 340.1 22.5 283 10-315 91-385 (391)
77 cd05584 STKc_p70S6K Catalytic 100.0 5E-47 1.1E-51 332.2 22.2 256 16-314 1-264 (323)
78 KOG0589 Serine/threonine prote 100.0 5.9E-48 1.3E-52 333.6 15.9 258 10-310 3-262 (426)
79 cd05598 STKc_LATS Catalytic do 100.0 1.9E-47 4.1E-52 341.8 19.8 266 11-317 1-312 (376)
80 cd07863 STKc_CDK4 Catalytic do 100.0 3.4E-46 7.4E-51 322.0 26.9 280 12-309 1-288 (288)
81 cd07874 STKc_JNK3 Catalytic do 100.0 1.1E-46 2.3E-51 334.5 24.3 296 8-314 14-319 (355)
82 cd05625 STKc_LATS1 Catalytic d 100.0 4E-47 8.7E-52 340.3 21.5 275 12-327 2-327 (382)
83 cd07860 STKc_CDK2_3 Catalytic 100.0 1.4E-46 3.1E-51 323.7 24.0 283 12-309 1-284 (284)
84 cd05619 STKc_nPKC_theta Cataly 100.0 1.2E-46 2.7E-51 328.4 23.8 267 17-327 1-271 (316)
85 cd07853 STKc_NLK Catalytic dom 100.0 9.7E-47 2.1E-51 336.7 23.4 290 12-313 1-295 (372)
86 cd05614 STKc_MSK2_N N-terminal 100.0 7.9E-47 1.7E-51 332.4 22.3 265 12-314 1-275 (332)
87 cd05588 STKc_aPKC Catalytic do 100.0 7.2E-47 1.6E-51 331.9 21.9 257 17-316 1-272 (329)
88 cd05621 STKc_ROCK2 Catalytic d 100.0 1.1E-46 2.3E-51 335.2 23.2 266 8-313 40-311 (370)
89 cd05615 STKc_cPKC_alpha Cataly 100.0 1.2E-46 2.7E-51 329.6 23.1 271 12-326 1-279 (323)
90 KOG0032 Ca2+/calmodulin-depend 100.0 2.9E-46 6.4E-51 327.3 25.1 262 9-313 33-300 (382)
91 cd05627 STKc_NDR2 Catalytic do 100.0 5.1E-47 1.1E-51 337.0 20.4 269 11-320 1-307 (360)
92 cd06649 PKc_MEK2 Catalytic dom 100.0 4.6E-46 9.9E-51 327.2 26.1 296 10-316 4-311 (331)
93 cd07841 STKc_CDK7 Catalytic do 100.0 8.7E-46 1.9E-50 321.1 26.6 293 12-317 1-293 (298)
94 PTZ00284 protein kinase; Provi 100.0 2.5E-46 5.4E-51 343.1 24.1 290 10-313 128-445 (467)
95 cd05586 STKc_Sck1_like Catalyt 100.0 5.5E-47 1.2E-51 333.1 18.7 256 19-316 1-263 (330)
96 PLN00009 cyclin-dependent kina 100.0 1.5E-45 3.2E-50 319.0 27.3 290 10-314 1-292 (294)
97 cd07844 STKc_PCTAIRE_like Cata 100.0 1.5E-45 3.3E-50 318.5 27.3 285 9-309 3-291 (291)
98 cd07836 STKc_Pho85 Catalytic d 100.0 9E-46 1.9E-50 318.8 25.8 282 12-309 1-284 (284)
99 cd05618 STKc_aPKC_iota Catalyt 100.0 1.5E-46 3.3E-51 329.7 21.2 259 17-315 1-271 (329)
100 cd07878 STKc_p38beta_MAPK11 Ca 100.0 3.4E-46 7.5E-51 329.8 23.5 288 9-317 13-309 (343)
101 cd05622 STKc_ROCK1 Catalytic d 100.0 3.4E-46 7.3E-51 332.3 23.4 280 7-326 39-326 (371)
102 cd07870 STKc_PFTAIRE2 Catalyti 100.0 1.7E-45 3.6E-50 318.2 26.8 287 10-309 4-291 (291)
103 cd05605 STKc_GRK4_like Catalyt 100.0 4E-46 8.8E-51 321.0 22.6 267 12-319 1-274 (285)
104 cd07868 STKc_CDK8 Catalytic do 100.0 6.8E-46 1.5E-50 324.5 24.2 284 16-309 6-317 (317)
105 cd05604 STKc_SGK3 Catalytic do 100.0 1.3E-46 2.8E-51 330.0 19.4 256 17-316 1-261 (325)
106 cd05617 STKc_aPKC_zeta Catalyt 100.0 4.7E-46 1E-50 326.5 22.9 270 17-329 1-285 (327)
107 KOG0611 Predicted serine/threo 100.0 3.7E-47 8.1E-52 318.3 14.7 255 10-310 52-307 (668)
108 cd05582 STKc_RSK_N N-terminal 100.0 1.2E-46 2.5E-51 329.3 18.5 255 16-315 1-263 (318)
109 PLN00034 mitogen-activated pro 100.0 6.9E-46 1.5E-50 328.9 23.5 262 9-315 72-337 (353)
110 cd05603 STKc_SGK2 Catalytic do 100.0 2.7E-46 5.8E-51 327.5 20.4 256 17-316 1-261 (321)
111 cd05597 STKc_DMPK_like Catalyt 100.0 7.9E-46 1.7E-50 325.6 23.2 279 11-327 1-287 (331)
112 KOG0666 Cyclin C-dependent kin 100.0 4.1E-47 8.9E-52 307.8 13.6 296 9-315 22-346 (438)
113 cd07866 STKc_BUR1 Catalytic do 100.0 3.1E-45 6.8E-50 319.4 26.4 290 5-309 2-311 (311)
114 cd05602 STKc_SGK1 Catalytic do 100.0 3.4E-46 7.5E-51 327.2 20.4 257 17-317 1-262 (325)
115 cd07835 STKc_CDK1_like Catalyt 100.0 2.6E-45 5.6E-50 315.8 25.3 282 13-309 1-283 (283)
116 cd07832 STKc_CCRK Catalytic do 100.0 3.6E-45 7.9E-50 315.3 26.2 284 12-310 1-286 (286)
117 cd07847 STKc_CDKL1_4 Catalytic 100.0 7.1E-45 1.5E-49 313.5 27.3 286 11-309 1-286 (286)
118 KOG0197 Tyrosine kinases [Sign 100.0 5.2E-46 1.1E-50 322.7 19.7 246 11-304 206-455 (468)
119 cd05607 STKc_GRK7 Catalytic do 100.0 2.7E-45 5.9E-50 314.5 23.5 261 19-319 1-267 (277)
120 cd08223 STKc_Nek4 Catalytic do 100.0 8.7E-45 1.9E-49 308.1 26.2 255 12-309 1-257 (257)
121 PHA03209 serine/threonine kina 100.0 1.4E-45 3E-50 327.1 21.9 281 11-312 66-357 (357)
122 cd05623 STKc_MRCK_alpha Cataly 100.0 1.7E-45 3.6E-50 323.8 21.9 278 11-326 1-286 (332)
123 cd05630 STKc_GRK6 Catalytic do 100.0 1.6E-45 3.6E-50 317.1 21.3 275 12-327 1-284 (285)
124 cd07867 STKc_CDC2L6 Catalytic 100.0 6.5E-45 1.4E-49 318.4 25.3 282 16-309 6-317 (317)
125 cd07864 STKc_CDK12 Catalytic d 100.0 1.3E-44 2.8E-49 314.3 27.0 292 5-309 1-302 (302)
126 cd07837 STKc_CdkB_plant Cataly 100.0 1.5E-44 3.3E-49 312.9 27.3 285 11-310 1-295 (295)
127 cd07865 STKc_CDK9 Catalytic do 100.0 1.7E-44 3.7E-49 314.7 27.7 291 7-309 8-310 (310)
128 cd07831 STKc_MOK Catalytic dom 100.0 7.1E-45 1.5E-49 312.8 24.9 280 13-309 1-282 (282)
129 PF00069 Pkinase: Protein kina 100.0 4.3E-46 9.4E-51 316.5 16.5 259 13-309 1-260 (260)
130 cd05580 STKc_PKA Catalytic dom 100.0 6E-45 1.3E-49 314.6 23.1 260 11-317 1-265 (290)
131 cd05624 STKc_MRCK_beta Catalyt 100.0 2.8E-45 6.1E-50 322.1 21.1 279 11-327 1-287 (331)
132 cd07850 STKc_JNK Catalytic dom 100.0 8.9E-45 1.9E-49 321.9 24.4 298 9-317 14-322 (353)
133 cd06650 PKc_MEK1 Catalytic dom 100.0 1.4E-44 3.1E-49 317.8 25.4 294 10-314 4-307 (333)
134 cd06644 STKc_STK10_LOK Catalyt 100.0 5.7E-45 1.2E-49 315.0 22.5 266 11-319 12-282 (292)
135 PHA03211 serine/threonine kina 100.0 1E-44 2.2E-49 328.2 24.8 280 10-311 168-460 (461)
136 cd06625 STKc_MEKK3_like Cataly 100.0 1.3E-44 2.9E-49 307.9 24.1 259 11-309 2-263 (263)
137 cd05574 STKc_phototropin_like 100.0 1.5E-44 3.2E-49 315.9 24.9 272 11-324 1-307 (316)
138 cd07846 STKc_CDKL2_3 Catalytic 100.0 1.2E-44 2.5E-49 312.1 23.3 286 11-309 1-286 (286)
139 PHA03207 serine/threonine kina 100.0 4.8E-45 1E-49 327.5 21.4 289 11-318 92-387 (392)
140 cd06611 STKc_SLK_like Catalyti 100.0 1.3E-44 2.8E-49 311.0 23.1 261 10-313 4-269 (280)
141 cd08529 STKc_FA2-like Catalyti 100.0 3.3E-44 7.1E-49 304.3 24.6 254 12-309 1-256 (256)
142 PTZ00024 cyclin-dependent prot 100.0 1.3E-43 2.9E-48 312.3 29.0 295 10-315 7-322 (335)
143 cd07829 STKc_CDK_like Catalyti 100.0 3.4E-44 7.4E-49 308.5 24.1 282 13-309 1-282 (282)
144 cd06655 STKc_PAK2 Catalytic do 100.0 3.7E-44 7.9E-49 310.3 24.4 259 10-313 18-276 (296)
145 cd06645 STKc_MAP4K3 Catalytic 100.0 4.4E-44 9.5E-49 305.5 24.5 259 9-308 7-267 (267)
146 cd06654 STKc_PAK1 Catalytic do 100.0 5.4E-44 1.2E-48 309.3 25.3 262 8-314 17-278 (296)
147 cd07858 STKc_TEY_MAPK_plant Ca 100.0 2.2E-44 4.8E-49 317.4 23.0 294 10-317 4-302 (337)
148 cd06643 STKc_SLK Catalytic dom 100.0 3.6E-44 7.7E-49 308.5 23.7 260 12-314 6-270 (282)
149 KOG4717 Serine/threonine prote 100.0 4.2E-45 9.2E-50 314.1 17.8 265 10-319 17-283 (864)
150 cd06646 STKc_MAP4K5 Catalytic 100.0 2.9E-44 6.4E-49 306.6 23.0 259 9-308 7-267 (267)
151 cd07833 STKc_CDKL Catalytic do 100.0 7.4E-44 1.6E-48 307.4 25.4 285 11-309 1-288 (288)
152 cd05632 STKc_GRK5 Catalytic do 100.0 3.8E-44 8.2E-49 308.7 23.4 274 12-326 1-283 (285)
153 cd07840 STKc_CDK9_like Catalyt 100.0 9E-44 2E-48 306.6 25.7 284 13-309 1-287 (287)
154 PTZ00283 serine/threonine prot 100.0 3E-44 6.5E-49 329.8 24.1 262 9-313 30-304 (496)
155 cd06656 STKc_PAK3 Catalytic do 100.0 4.1E-44 8.9E-49 310.3 23.6 264 8-316 16-279 (297)
156 cd05609 STKc_MAST Catalytic do 100.0 6.4E-44 1.4E-48 310.3 24.4 276 11-327 1-294 (305)
157 cd07842 STKc_CDK8_like Catalyt 100.0 2.7E-44 5.9E-49 314.2 22.2 288 12-309 1-316 (316)
158 cd08227 PK_STRAD_alpha Pseudok 100.0 5.5E-44 1.2E-48 313.6 24.0 293 14-313 1-314 (327)
159 cd07849 STKc_ERK1_2_like Catal 100.0 4.9E-44 1.1E-48 315.1 23.5 290 10-317 4-303 (336)
160 KOG0579 Ste20-like serine/thre 100.0 7.6E-46 1.6E-50 325.6 11.6 262 11-315 32-298 (1187)
161 cd06615 PKc_MEK Catalytic doma 100.0 1E-43 2.2E-48 309.4 24.9 292 11-316 1-297 (308)
162 KOG0577 Serine/threonine prote 100.0 1.8E-45 3.9E-50 320.9 13.5 257 12-313 27-285 (948)
163 PTZ00267 NIMA-related protein 100.0 5.2E-44 1.1E-48 327.9 23.5 257 10-312 66-329 (478)
164 cd06628 STKc_MAPKKK_Byr2_like 100.0 7.3E-44 1.6E-48 304.1 22.8 260 12-309 1-267 (267)
165 KOG0574 STE20-like serine/thre 100.0 5.8E-47 1.3E-51 306.0 3.3 258 12-315 34-292 (502)
166 cd06613 STKc_MAP4K3_like Catal 100.0 1.3E-43 2.7E-48 301.8 24.0 257 11-308 3-262 (262)
167 cd05118 STKc_CMGC Catalytic do 100.0 9.1E-44 2E-48 306.0 23.3 282 13-309 1-283 (283)
168 cd07834 STKc_MAPK Catalytic do 100.0 6.1E-44 1.3E-48 313.9 22.6 293 12-317 1-300 (330)
169 cd07855 STKc_ERK5 Catalytic do 100.0 4.5E-44 9.7E-49 315.1 21.7 292 11-319 5-307 (334)
170 cd06609 STKc_MST3_like Catalyt 100.0 1.3E-43 2.8E-48 303.8 23.7 259 11-314 1-259 (274)
171 KOG0612 Rho-associated, coiled 100.0 2.2E-45 4.8E-50 340.6 13.4 279 10-329 74-361 (1317)
172 cd06637 STKc_TNIK Catalytic do 100.0 2.2E-43 4.7E-48 302.0 24.9 255 11-309 6-272 (272)
173 cd07854 STKc_MAPK4_6 Catalytic 100.0 1.8E-43 3.9E-48 312.1 25.1 288 11-316 5-310 (342)
174 cd07852 STKc_MAPK15 Catalytic 100.0 8.9E-44 1.9E-48 313.7 23.0 308 7-328 3-318 (337)
175 cd06658 STKc_PAK5 Catalytic do 100.0 6.8E-44 1.5E-48 308.1 21.8 262 10-316 21-282 (292)
176 cd06612 STKc_MST1_2 Catalytic 100.0 2E-43 4.2E-48 299.5 23.9 253 11-309 3-256 (256)
177 cd08218 STKc_Nek1 Catalytic do 100.0 1.7E-43 3.7E-48 300.0 23.2 254 12-309 1-256 (256)
178 PTZ00266 NIMA-related protein 100.0 2.2E-43 4.7E-48 335.0 26.1 270 3-315 5-304 (1021)
179 cd06610 STKc_OSR1_SPAK Catalyt 100.0 1.9E-43 4.2E-48 301.4 23.4 260 11-309 1-267 (267)
180 cd05577 STKc_GRK Catalytic dom 100.0 2.3E-43 5E-48 302.7 23.7 261 19-320 1-268 (277)
181 cd07851 STKc_p38 Catalytic dom 100.0 8.9E-44 1.9E-48 314.2 21.2 296 9-325 13-317 (343)
182 cd05572 STKc_cGK_PKG Catalytic 100.0 3.3E-43 7.2E-48 299.3 23.6 254 19-315 1-261 (262)
183 cd06619 PKc_MKK5 Catalytic dom 100.0 9.9E-44 2.1E-48 305.2 20.4 260 11-316 1-263 (279)
184 cd06639 STKc_myosinIIIB Cataly 100.0 4.8E-43 1E-47 302.9 24.7 259 9-310 20-291 (291)
185 cd07880 STKc_p38gamma_MAPK12 C 100.0 3.1E-43 6.7E-48 310.6 23.8 296 9-325 13-317 (343)
186 cd08221 STKc_Nek9 Catalytic do 100.0 7.7E-43 1.7E-47 296.0 25.0 254 12-309 1-256 (256)
187 cd06631 STKc_YSK4 Catalytic do 100.0 5.9E-43 1.3E-47 298.2 24.3 259 12-309 1-265 (265)
188 cd07879 STKc_p38delta_MAPK13 C 100.0 4.8E-43 1E-47 309.4 24.4 291 10-319 14-310 (342)
189 cd05102 PTKc_VEGFR3 Catalytic 100.0 1.4E-43 3E-48 312.6 21.0 253 10-305 6-329 (338)
190 cd06648 STKc_PAK_II Catalytic 100.0 7.6E-43 1.6E-47 300.6 25.0 260 11-315 19-278 (285)
191 cd08217 STKc_Nek2 Catalytic do 100.0 6.7E-43 1.5E-47 297.6 24.2 255 12-309 1-265 (265)
192 cd06608 STKc_myosinIII_like Ca 100.0 4.1E-43 8.9E-48 300.6 23.0 257 10-309 5-275 (275)
193 cd06651 STKc_MEKK3 Catalytic d 100.0 6.7E-43 1.4E-47 298.1 24.1 260 11-310 2-265 (266)
194 cd06607 STKc_TAO Catalytic dom 100.0 8E-43 1.7E-47 303.7 25.0 260 9-313 13-274 (307)
195 cd06636 STKc_MAP4K4_6 Catalyti 100.0 4.7E-43 1E-47 301.6 23.0 256 10-309 15-282 (282)
196 cd06640 STKc_MST4 Catalytic do 100.0 5.6E-43 1.2E-47 300.3 23.0 258 11-314 4-261 (277)
197 cd06659 STKc_PAK6 Catalytic do 100.0 5.1E-43 1.1E-47 303.3 22.9 260 11-315 21-280 (297)
198 cd05611 STKc_Rim15_like Cataly 100.0 6E-43 1.3E-47 297.3 22.6 255 17-315 2-260 (260)
199 cd06638 STKc_myosinIIIA Cataly 100.0 7.7E-43 1.7E-47 300.8 23.6 258 9-309 16-286 (286)
200 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 5E-43 1.1E-47 302.0 22.0 263 11-316 1-272 (286)
201 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 1.6E-42 3.6E-47 304.0 25.6 292 10-318 9-300 (328)
202 cd07877 STKc_p38alpha_MAPK14 C 100.0 1.2E-42 2.6E-47 307.1 24.8 295 10-322 16-316 (345)
203 cd06917 STKc_NAK1_like Catalyt 100.0 8E-43 1.7E-47 299.4 22.9 260 12-315 2-264 (277)
204 cd06633 STKc_TAO3 Catalytic do 100.0 2E-42 4.4E-47 301.8 25.7 266 3-313 13-280 (313)
205 cd06642 STKc_STK25-YSK1 Cataly 100.0 1.2E-43 2.7E-48 304.4 17.7 259 11-315 4-262 (277)
206 cd06605 PKc_MAPKK Catalytic do 100.0 3.3E-43 7.2E-48 299.7 19.8 257 11-313 1-264 (265)
207 cd05578 STKc_Yank1 Catalytic d 100.0 3E-43 6.5E-48 298.9 19.5 256 12-309 1-258 (258)
208 cd05579 STKc_MAST_like Catalyt 100.0 6.2E-43 1.3E-47 297.8 21.4 254 19-314 1-265 (265)
209 KOG0193 Serine/threonine prote 100.0 2.4E-44 5.2E-49 315.0 12.8 253 10-305 391-648 (678)
210 cd06630 STKc_MEKK1 Catalytic d 100.0 9.4E-43 2E-47 297.4 22.4 263 12-310 1-268 (268)
211 cd07857 STKc_MPK1 Catalytic do 100.0 1.7E-42 3.7E-47 304.8 24.6 294 12-319 1-305 (332)
212 cd05633 STKc_GRK3 Catalytic do 100.0 2.1E-42 4.6E-47 296.8 24.5 258 18-317 1-266 (279)
213 cd06641 STKc_MST3 Catalytic do 100.0 1.1E-42 2.4E-47 298.5 22.6 258 12-315 5-262 (277)
214 cd06632 STKc_MEKK1_plant Catal 100.0 1.9E-42 4.2E-47 293.7 23.9 258 12-309 1-258 (258)
215 KOG0604 MAP kinase-activated p 100.0 3.4E-44 7.5E-49 289.4 12.3 257 9-313 59-329 (400)
216 cd06647 STKc_PAK_I Catalytic d 100.0 5.4E-43 1.2E-47 302.7 20.7 260 9-313 17-276 (293)
217 cd07830 STKc_MAK_like Catalyti 100.0 1.1E-42 2.4E-47 299.4 22.5 281 13-309 1-283 (283)
218 cd06617 PKc_MKK3_6 Catalytic d 100.0 1.3E-42 2.8E-47 298.9 22.8 261 11-315 1-270 (283)
219 KOG4721 Serine/threonine prote 100.0 2.5E-44 5.4E-49 312.5 11.9 242 10-306 123-364 (904)
220 cd06629 STKc_MAPKKK_Bck1_like 100.0 1.7E-42 3.7E-47 296.5 22.8 266 12-309 2-272 (272)
221 KOG0669 Cyclin T-dependent kin 100.0 2.2E-44 4.8E-49 284.1 10.0 300 4-315 10-324 (376)
222 cd06652 STKc_MEKK2 Catalytic d 100.0 3.1E-42 6.6E-47 293.8 24.1 260 11-310 2-265 (265)
223 cd06623 PKc_MAPKK_plant_like C 100.0 1.8E-42 3.9E-47 294.9 22.5 258 11-313 1-263 (264)
224 cd05581 STKc_PDK1 Catalytic do 100.0 1.2E-42 2.7E-47 298.5 21.3 255 11-309 1-280 (280)
225 cd08225 STKc_Nek5 Catalytic do 100.0 2.5E-42 5.4E-47 292.9 23.0 254 12-309 1-257 (257)
226 PHA02988 hypothetical protein; 100.0 2.9E-42 6.4E-47 296.4 23.6 249 12-305 19-274 (283)
227 cd06616 PKc_MKK4 Catalytic dom 100.0 2.2E-42 4.8E-47 298.3 23.0 267 10-316 3-277 (288)
228 cd06626 STKc_MEKK4 Catalytic d 100.0 4.4E-42 9.5E-47 292.6 24.4 258 12-309 1-264 (264)
229 cd08219 STKc_Nek3 Catalytic do 100.0 2.1E-42 4.6E-47 293.2 22.3 250 12-306 1-252 (255)
230 cd05606 STKc_beta_ARK Catalyti 100.0 4.1E-42 8.9E-47 295.0 24.0 259 18-318 1-267 (278)
231 cd08220 STKc_Nek8 Catalytic do 100.0 3.7E-42 8.1E-47 291.7 23.4 253 12-309 1-256 (256)
232 cd08215 STKc_Nek Catalytic dom 100.0 4.2E-42 9E-47 291.5 23.4 254 12-309 1-258 (258)
233 cd06657 STKc_PAK4 Catalytic do 100.0 4.4E-42 9.5E-47 296.7 23.8 260 12-316 21-280 (292)
234 KOG0983 Mitogen-activated prot 100.0 4.4E-43 9.6E-48 279.8 16.0 263 8-313 89-356 (391)
235 cd07838 STKc_CDK4_6_like Catal 100.0 1E-41 2.2E-46 293.9 25.6 279 13-309 1-287 (287)
236 cd06635 STKc_TAO1 Catalytic do 100.0 1.2E-41 2.6E-46 297.5 26.4 258 11-313 25-284 (317)
237 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 4.6E-42 1E-46 295.7 23.0 262 10-313 4-273 (284)
238 cd06634 STKc_TAO2 Catalytic do 100.0 7.8E-42 1.7E-46 297.5 24.6 262 7-313 11-274 (308)
239 cd06627 STKc_Cdc7_like Catalyt 100.0 1.1E-41 2.3E-46 288.4 24.6 254 12-309 1-254 (254)
240 PHA03390 pk1 serine/threonine- 100.0 1.1E-41 2.3E-46 290.6 24.6 250 9-311 12-267 (267)
241 cd06624 STKc_ASK Catalytic dom 100.0 9.9E-42 2.1E-46 291.2 24.3 255 12-309 9-268 (268)
242 cd08228 STKc_Nek6 Catalytic do 100.0 6.9E-42 1.5E-46 291.9 23.3 255 10-306 1-261 (267)
243 cd06614 STKc_PAK Catalytic dom 100.0 8.3E-42 1.8E-46 294.4 23.4 260 8-312 16-276 (286)
244 cd05064 PTKc_EphR_A10 Catalyti 100.0 5.3E-42 1.1E-46 292.5 21.8 251 10-305 4-260 (266)
245 KOG0986 G protein-coupled rece 100.0 1.3E-43 2.7E-48 300.6 11.3 278 9-327 183-469 (591)
246 cd05048 PTKc_Ror Catalytic Dom 100.0 6.3E-42 1.4E-46 294.7 21.9 253 9-306 3-279 (283)
247 cd05114 PTKc_Tec_Rlk Catalytic 100.0 1.7E-41 3.6E-46 287.8 24.1 248 10-305 3-253 (256)
248 cd08226 PK_STRAD_beta Pseudoki 100.0 2.9E-42 6.2E-47 302.9 19.9 304 16-326 3-328 (328)
249 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 1.7E-41 3.8E-46 292.5 24.3 263 11-313 1-273 (287)
250 PHA03210 serine/threonine kina 100.0 1.4E-42 3.1E-47 319.5 17.5 298 8-313 145-461 (501)
251 KOG1989 ARK protein kinase fam 100.0 1.8E-42 3.9E-47 316.2 17.8 256 11-313 37-322 (738)
252 cd05113 PTKc_Btk_Bmx Catalytic 100.0 2.8E-41 6.1E-46 286.4 23.8 249 10-306 3-254 (256)
253 cd05061 PTKc_InsR Catalytic do 100.0 3.1E-41 6.7E-46 291.1 24.1 261 9-314 4-288 (288)
254 cd05096 PTKc_DDR1 Catalytic do 100.0 2.6E-41 5.7E-46 293.8 23.8 257 11-305 5-300 (304)
255 KOG0586 Serine/threonine prote 100.0 1.4E-42 3E-47 305.0 15.5 265 6-315 51-315 (596)
256 cd06606 STKc_MAPKKK Catalytic 100.0 4.3E-41 9.4E-46 285.3 24.2 257 12-309 1-260 (260)
257 KOG0596 Dual specificity; seri 100.0 4.7E-42 1E-46 297.5 18.3 263 11-315 361-636 (677)
258 cd05148 PTKc_Srm_Brk Catalytic 100.0 1.9E-41 4.2E-46 288.2 21.9 250 9-305 4-256 (261)
259 cd05052 PTKc_Abl Catalytic dom 100.0 3E-41 6.5E-46 287.4 23.1 250 10-306 5-258 (263)
260 cd05059 PTKc_Tec_like Catalyti 100.0 4.4E-41 9.4E-46 285.3 24.0 249 10-306 3-254 (256)
261 cd05122 PKc_STE Catalytic doma 100.0 5.7E-41 1.2E-45 283.4 24.6 252 12-308 1-253 (253)
262 cd06618 PKc_MKK7 Catalytic dom 100.0 2.1E-41 4.7E-46 293.2 22.3 265 9-316 13-283 (296)
263 cd05123 STKc_AGC Catalytic dom 100.0 3.1E-41 6.7E-46 285.1 22.7 247 19-309 1-250 (250)
264 KOG0607 MAP kinase-interacting 100.0 1.4E-42 3E-47 282.5 13.7 263 10-315 76-370 (463)
265 KOG0696 Serine/threonine prote 100.0 8.8E-43 1.9E-47 292.7 12.9 275 10-328 348-630 (683)
266 cd08530 STKc_CNK2-like Catalyt 100.0 4E-41 8.6E-46 285.4 23.3 252 12-309 1-256 (256)
267 cd08229 STKc_Nek7 Catalytic do 100.0 2.8E-41 6E-46 288.2 22.3 254 10-305 1-260 (267)
268 cd05104 PTKc_Kit Catalytic dom 100.0 2.3E-41 4.9E-46 301.8 22.5 252 11-306 35-370 (375)
269 cd05613 STKc_MSK1_N N-terminal 100.0 2.6E-41 5.7E-46 291.9 22.1 268 12-317 1-279 (290)
270 cd05108 PTKc_EGFR Catalytic do 100.0 2.8E-41 6.1E-46 295.1 21.9 251 10-306 6-264 (316)
271 cd05093 PTKc_TrkB Catalytic do 100.0 4.4E-41 9.5E-46 290.2 22.8 249 11-305 5-274 (288)
272 cd05106 PTKc_CSF-1R Catalytic 100.0 2.3E-41 4.9E-46 301.6 21.7 252 10-305 37-367 (374)
273 cd05049 PTKc_Trk Catalytic dom 100.0 3.3E-41 7.2E-46 289.7 21.9 251 10-305 4-276 (280)
274 cd05033 PTKc_EphR Catalytic do 100.0 4.9E-41 1.1E-45 286.6 22.7 252 10-306 3-261 (266)
275 cd05084 PTKc_Fes Catalytic dom 100.0 5.6E-41 1.2E-45 283.9 22.8 244 17-305 1-248 (252)
276 PF07714 Pkinase_Tyr: Protein 100.0 8.8E-42 1.9E-46 289.9 17.8 247 14-305 2-257 (259)
277 cd05082 PTKc_Csk Catalytic dom 100.0 7.3E-41 1.6E-45 283.9 23.3 245 9-305 4-251 (256)
278 cd05054 PTKc_VEGFR Catalytic d 100.0 2.5E-41 5.5E-46 297.4 20.6 253 11-306 7-329 (337)
279 cd06653 STKc_MEKK3_like_1 Cata 100.0 1.3E-40 2.8E-45 283.7 24.2 259 11-309 2-264 (264)
280 cd05072 PTKc_Lyn Catalytic dom 100.0 9.8E-41 2.1E-45 283.9 23.2 249 9-305 4-256 (261)
281 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 1.5E-40 3.2E-45 283.6 24.3 253 11-305 2-260 (267)
282 PRK13184 pknD serine/threonine 100.0 6.5E-41 1.4E-45 316.9 23.9 255 10-305 1-284 (932)
283 cd05583 STKc_MSK_N N-terminal 100.0 6E-41 1.3E-45 289.3 21.7 268 12-317 1-277 (288)
284 KOG2345 Serine/threonine prote 100.0 4.1E-42 8.8E-47 270.5 13.0 255 11-306 21-296 (302)
285 cd05116 PTKc_Syk Catalytic dom 100.0 1.1E-40 2.4E-45 282.9 22.9 243 18-305 2-250 (257)
286 cd05067 PTKc_Lck_Blk Catalytic 100.0 1.2E-40 2.5E-45 283.3 22.7 247 10-305 5-255 (260)
287 cd05109 PTKc_HER2 Catalytic do 100.0 1.2E-40 2.6E-45 286.1 23.0 251 10-306 6-264 (279)
288 cd08222 STKc_Nek11 Catalytic d 100.0 5.8E-41 1.3E-45 285.1 20.6 256 12-309 1-260 (260)
289 cd05062 PTKc_IGF-1R Catalytic 100.0 1.1E-40 2.3E-45 286.2 22.1 252 10-306 5-274 (277)
290 cd05088 PTKc_Tie2 Catalytic do 100.0 7.6E-41 1.7E-45 290.6 21.2 252 9-306 5-276 (303)
291 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 2.6E-40 5.6E-45 281.1 23.9 248 9-305 4-255 (260)
292 cd05090 PTKc_Ror1 Catalytic do 100.0 1.3E-40 2.8E-45 286.5 22.2 253 9-306 3-279 (283)
293 cd05111 PTK_HER3 Pseudokinase 100.0 2.3E-40 5E-45 284.3 23.7 251 10-306 6-264 (279)
294 cd05036 PTKc_ALK_LTK Catalytic 100.0 1.4E-40 3E-45 285.5 22.1 252 10-306 5-274 (277)
295 cd05068 PTKc_Frk_like Catalyti 100.0 2.5E-40 5.3E-45 281.5 23.4 248 10-305 5-256 (261)
296 cd05610 STKc_MASTL Catalytic d 100.0 1.8E-40 3.9E-45 314.6 24.8 151 9-165 2-152 (669)
297 cd05071 PTKc_Src Catalytic dom 100.0 2.8E-40 6E-45 281.2 23.4 247 10-305 5-255 (262)
298 cd00192 PTKc Catalytic domain 100.0 2.8E-40 6.1E-45 280.9 23.1 245 17-306 1-260 (262)
299 KOG0603 Ribosomal protein S6 k 100.0 3.6E-41 7.8E-46 297.6 17.8 246 9-310 320-567 (612)
300 cd05094 PTKc_TrkC Catalytic do 100.0 2E-40 4.3E-45 286.5 22.2 251 10-306 4-278 (291)
301 cd05091 PTKc_Ror2 Catalytic do 100.0 1.9E-40 4.1E-45 285.5 21.9 253 9-306 3-279 (283)
302 cd08216 PK_STRAD Pseudokinase 100.0 3.3E-40 7.2E-45 288.2 23.1 288 14-314 5-303 (314)
303 cd05092 PTKc_TrkA Catalytic do 100.0 2.8E-40 6.1E-45 284.0 22.0 250 10-305 4-276 (280)
304 cd05034 PTKc_Src_like Catalyti 100.0 6.3E-40 1.4E-44 278.9 23.8 249 9-305 4-256 (261)
305 cd05039 PTKc_Csk_like Catalyti 100.0 6.2E-40 1.3E-44 278.2 23.6 245 9-305 4-251 (256)
306 cd05032 PTKc_InsR_like Catalyt 100.0 3.3E-40 7.2E-45 283.1 22.0 253 9-306 4-274 (277)
307 cd05075 PTKc_Axl Catalytic dom 100.0 4.8E-40 1E-44 281.3 23.0 251 13-306 1-267 (272)
308 cd05053 PTKc_FGFR Catalytic do 100.0 1.7E-40 3.6E-45 287.3 20.3 252 10-306 11-287 (293)
309 cd05069 PTKc_Yes Catalytic dom 100.0 1E-39 2.2E-44 277.5 24.4 246 11-305 6-255 (260)
310 KOG4279 Serine/threonine prote 100.0 3.1E-41 6.8E-46 299.3 15.1 251 18-312 582-838 (1226)
311 KOG4236 Serine/threonine prote 100.0 9.7E-42 2.1E-46 294.2 11.5 255 15-313 568-826 (888)
312 cd05060 PTKc_Syk_like Catalyti 100.0 7.2E-40 1.6E-44 277.9 22.7 242 17-305 1-250 (257)
313 cd05112 PTKc_Itk Catalytic dom 100.0 1.4E-39 3E-44 276.0 24.3 249 10-306 3-254 (256)
314 cd05035 PTKc_Axl_like Catalyti 100.0 6E-40 1.3E-44 280.8 22.3 251 13-306 1-268 (273)
315 cd05089 PTKc_Tie1 Catalytic do 100.0 6.4E-40 1.4E-44 284.1 22.5 250 11-306 2-271 (297)
316 cd05066 PTKc_EphR_A Catalytic 100.0 6E-40 1.3E-44 280.0 21.9 251 10-305 3-261 (267)
317 cd05115 PTKc_Zap-70 Catalytic 100.0 1.1E-39 2.4E-44 276.8 23.2 242 18-305 2-250 (257)
318 KOG0671 LAMMER dual specificit 100.0 8.8E-42 1.9E-46 284.0 9.6 295 5-313 83-413 (415)
319 KOG0584 Serine/threonine prote 100.0 3.1E-41 6.8E-46 296.9 13.6 255 14-312 43-302 (632)
320 cd05103 PTKc_VEGFR2 Catalytic 100.0 5.6E-40 1.2E-44 289.9 21.8 254 10-306 6-335 (343)
321 cd05063 PTKc_EphR_A2 Catalytic 100.0 1.4E-39 3E-44 277.9 23.4 251 10-305 4-262 (268)
322 cd05098 PTKc_FGFR1 Catalytic d 100.0 8.5E-40 1.8E-44 284.7 22.2 251 11-306 18-295 (307)
323 cd05055 PTKc_PDGFR Catalytic d 100.0 1.4E-39 3E-44 282.5 23.2 253 9-305 33-296 (302)
324 cd05043 PTK_Ryk Pseudokinase d 100.0 8.4E-40 1.8E-44 281.0 21.5 252 10-305 5-271 (280)
325 cd05105 PTKc_PDGFR_alpha Catal 100.0 9.9E-40 2.2E-44 292.3 22.8 252 10-305 36-392 (400)
326 KOG1095 Protein tyrosine kinas 100.0 3.2E-40 7E-45 310.5 20.2 250 11-305 692-956 (1025)
327 cd05057 PTKc_EGFR_like Catalyt 100.0 1.8E-39 3.8E-44 278.9 23.1 250 10-305 6-263 (279)
328 cd05051 PTKc_DDR Catalytic dom 100.0 1.3E-39 2.8E-44 282.1 22.5 258 10-305 4-292 (296)
329 cd05085 PTKc_Fer Catalytic dom 100.0 2.8E-39 6E-44 273.2 23.4 244 17-306 1-247 (250)
330 KOG1035 eIF-2alpha kinase GCN2 100.0 3E-40 6.4E-45 308.8 18.7 262 7-311 475-876 (1351)
331 cd05045 PTKc_RET Catalytic dom 100.0 1.8E-39 3.8E-44 280.5 22.3 249 12-305 1-281 (290)
332 cd05097 PTKc_DDR_like Catalyti 100.0 1.6E-39 3.4E-44 281.4 21.9 257 11-305 5-291 (295)
333 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 2.9E-39 6.2E-44 278.3 23.4 267 11-306 4-279 (284)
334 cd05058 PTKc_Met_Ron Catalytic 100.0 2.6E-39 5.6E-44 275.3 22.8 246 17-306 1-255 (262)
335 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 1.8E-39 4E-44 276.1 21.8 239 17-306 1-260 (262)
336 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 1.4E-39 3.1E-44 278.6 21.3 238 18-306 2-272 (274)
337 KOG0194 Protein tyrosine kinas 100.0 1.8E-40 3.9E-45 292.4 15.9 254 10-306 156-416 (474)
338 cd05099 PTKc_FGFR4 Catalytic d 100.0 2.5E-39 5.5E-44 282.5 23.0 252 10-306 11-289 (314)
339 smart00219 TyrKc Tyrosine kina 100.0 2.5E-39 5.5E-44 274.5 22.3 248 13-305 1-256 (258)
340 cd08528 STKc_Nek10 Catalytic d 100.0 3.8E-39 8.3E-44 275.3 23.1 257 12-306 1-266 (269)
341 cd05065 PTKc_EphR_B Catalytic 100.0 2.5E-39 5.4E-44 276.5 21.9 252 10-306 3-264 (269)
342 cd05050 PTKc_Musk Catalytic do 100.0 2.4E-39 5.3E-44 279.3 21.9 251 10-305 4-284 (288)
343 cd05083 PTKc_Chk Catalytic dom 100.0 2.2E-39 4.9E-44 274.4 21.3 243 9-305 4-249 (254)
344 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 2.5E-39 5.5E-44 278.5 21.9 266 10-305 2-276 (283)
345 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 2.5E-39 5.3E-44 278.7 21.6 266 12-306 5-279 (284)
346 cd05101 PTKc_FGFR2 Catalytic d 100.0 2.8E-39 6E-44 281.1 22.0 253 9-306 13-292 (304)
347 cd05056 PTKc_FAK Catalytic dom 100.0 3.4E-39 7.3E-44 275.8 22.0 251 10-306 5-261 (270)
348 cd05041 PTKc_Fes_like Catalyti 100.0 4.6E-39 9.9E-44 272.0 22.6 243 17-305 1-247 (251)
349 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 7.9E-40 1.7E-44 277.8 17.9 239 17-306 1-256 (258)
350 KOG0614 cGMP-dependent protein 100.0 4.5E-41 9.8E-46 288.7 9.8 279 7-328 416-701 (732)
351 KOG1187 Serine/threonine prote 100.0 7.7E-40 1.7E-44 286.4 17.7 201 11-221 75-281 (361)
352 cd05073 PTKc_Hck Catalytic dom 100.0 5.3E-39 1.1E-43 273.1 22.3 247 10-305 5-255 (260)
353 cd05110 PTKc_HER4 Catalytic do 100.0 5.1E-39 1.1E-43 279.2 22.7 250 11-306 7-264 (303)
354 cd05576 STKc_RPK118_like Catal 100.0 1.9E-39 4.2E-44 271.9 19.3 229 22-309 4-237 (237)
355 cd05046 PTK_CCK4 Pseudokinase 100.0 5.9E-39 1.3E-43 275.1 22.5 252 11-306 5-272 (275)
356 cd05040 PTKc_Ack_like Catalyti 100.0 6.2E-39 1.4E-43 272.2 22.3 244 17-305 1-253 (257)
357 cd05095 PTKc_DDR2 Catalytic do 100.0 8.5E-39 1.8E-43 277.0 22.8 257 11-305 5-292 (296)
358 cd05107 PTKc_PDGFR_beta Cataly 100.0 1.1E-38 2.5E-43 285.3 24.1 253 10-306 36-395 (401)
359 cd05100 PTKc_FGFR3 Catalytic d 100.0 7.9E-39 1.7E-43 281.7 22.2 251 11-306 12-289 (334)
360 KOG1026 Nerve growth factor re 100.0 6.7E-40 1.5E-44 298.3 15.5 248 11-304 486-756 (774)
361 cd05047 PTKc_Tie Catalytic dom 100.0 1.6E-38 3.5E-43 271.6 22.7 243 17-305 1-263 (270)
362 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 1.4E-38 3E-43 270.2 21.5 236 17-305 1-256 (259)
363 KOG4645 MAPKKK (MAP kinase kin 100.0 1.2E-40 2.6E-45 313.0 9.1 264 9-315 1233-1503(1509)
364 PHA02882 putative serine/threo 100.0 2.7E-38 5.9E-43 273.4 22.3 262 11-305 12-291 (294)
365 cd05044 PTKc_c-ros Catalytic d 100.0 2.2E-38 4.9E-43 270.6 20.9 244 17-305 1-265 (269)
366 KOG1006 Mitogen-activated prot 100.0 1.2E-40 2.6E-45 264.8 6.0 264 12-315 65-336 (361)
367 cd05042 PTKc_Aatyk Catalytic d 100.0 4.9E-38 1.1E-42 268.5 22.4 250 17-306 1-266 (269)
368 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 6.8E-38 1.5E-42 267.6 23.1 249 17-305 1-265 (269)
369 KOG0695 Serine/threonine prote 100.0 3.3E-39 7.1E-44 264.9 14.1 281 7-331 246-543 (593)
370 cd05074 PTKc_Tyro3 Catalytic d 100.0 5.4E-38 1.2E-42 268.8 22.1 251 13-306 1-268 (273)
371 KOG1151 Tousled-like protein k 100.0 1.1E-39 2.4E-44 276.4 10.5 272 8-311 460-746 (775)
372 KOG0665 Jun-N-terminal kinase 100.0 3.4E-39 7.3E-44 262.8 12.5 292 9-312 15-316 (369)
373 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 5.8E-38 1.3E-42 270.1 20.7 266 11-305 4-278 (284)
374 KOG0668 Casein kinase II, alph 100.0 2.1E-39 4.6E-44 252.6 10.5 286 9-317 36-333 (338)
375 KOG0587 Traf2- and Nck-interac 100.0 1.3E-38 2.8E-43 289.3 16.1 259 11-312 19-288 (953)
376 KOG0608 Warts/lats-like serine 100.0 6.8E-39 1.5E-43 281.8 13.8 276 12-329 630-951 (1034)
377 KOG4257 Focal adhesion tyrosin 100.0 4.2E-38 9.2E-43 276.4 15.1 246 12-304 390-643 (974)
378 cd05086 PTKc_Aatyk2 Catalytic 100.0 9.1E-37 2E-41 260.5 23.0 249 17-305 1-264 (268)
379 KOG0199 ACK and related non-re 100.0 1E-37 2.2E-42 277.1 16.0 257 11-313 110-375 (1039)
380 PLN03225 Serine/threonine-prot 100.0 2.4E-37 5.1E-42 286.7 18.9 279 8-315 129-459 (566)
381 KOG1027 Serine/threonine prote 100.0 1.8E-38 4E-43 287.0 10.4 250 13-313 511-774 (903)
382 KOG0196 Tyrosine kinase, EPH ( 100.0 3.2E-38 6.8E-43 283.4 11.7 251 11-306 629-887 (996)
383 KOG4278 Protein tyrosine kinas 100.0 1.5E-37 3.2E-42 273.1 15.5 246 12-304 268-517 (1157)
384 smart00220 S_TKc Serine/Threon 100.0 2.8E-36 6E-41 253.2 22.3 242 23-309 1-244 (244)
385 KOG1290 Serine/threonine prote 100.0 2.8E-36 6.1E-41 258.1 20.6 290 11-315 78-559 (590)
386 KOG1094 Discoidin domain recep 100.0 9.2E-37 2E-41 266.1 16.9 255 12-305 539-799 (807)
387 KOG4250 TANK binding protein k 100.0 1.7E-37 3.7E-42 276.8 11.5 205 11-223 13-229 (732)
388 KOG0670 U4/U6-associated splic 100.0 1E-37 2.2E-42 268.7 9.0 294 5-311 426-751 (752)
389 KOG0664 Nemo-like MAPK-related 100.0 3.4E-38 7.3E-43 252.1 4.4 286 12-313 54-350 (449)
390 PLN03224 probable serine/threo 100.0 1E-34 2.3E-39 262.8 22.9 280 8-311 142-505 (507)
391 KOG1025 Epidermal growth facto 100.0 4.8E-35 1E-39 264.2 15.9 248 12-305 697-952 (1177)
392 KOG1152 Signal transduction se 100.0 1.8E-35 3.9E-40 257.8 10.8 209 9-220 559-771 (772)
393 PLN00113 leucine-rich repeat r 100.0 3.2E-34 7E-39 285.1 19.2 254 11-306 690-947 (968)
394 KOG1167 Serine/threonine prote 100.0 6.3E-35 1.4E-39 246.2 10.8 292 8-313 33-388 (418)
395 KOG0576 Mitogen-activated prot 100.0 2.1E-35 4.6E-40 261.2 6.3 261 11-312 15-277 (829)
396 KOG0984 Mitogen-activated prot 100.0 9.5E-34 2E-38 217.7 12.9 214 11-233 46-268 (282)
397 KOG2052 Activin A type IB rece 100.0 2.1E-33 4.6E-38 238.2 15.2 189 10-213 210-421 (513)
398 KOG0200 Fibroblast/platelet-de 100.0 1.9E-32 4.2E-37 256.3 20.2 247 14-305 299-574 (609)
399 KOG3653 Transforming growth fa 100.0 9.9E-33 2.1E-37 235.7 13.7 191 10-215 209-421 (534)
400 cd00180 PKc Catalytic domain o 100.0 6.2E-31 1.3E-35 215.7 21.6 213 19-307 1-215 (215)
401 KOG1024 Receptor-like protein 100.0 1.6E-31 3.5E-36 223.5 14.2 250 12-305 285-550 (563)
402 KOG1345 Serine/threonine kinas 100.0 3.1E-32 6.8E-37 217.5 8.3 259 6-308 19-289 (378)
403 smart00221 STYKc Protein kinas 100.0 9.7E-30 2.1E-34 211.1 19.6 203 13-224 1-207 (225)
404 PLN00181 protein SPA1-RELATED; 100.0 6.7E-31 1.4E-35 255.1 12.1 198 76-312 33-271 (793)
405 smart00750 KIND kinase non-cat 100.0 2.6E-29 5.5E-34 200.8 13.2 167 101-311 1-170 (176)
406 KOG0590 Checkpoint kinase and 99.9 2.1E-28 4.5E-33 226.5 5.4 269 14-314 321-593 (601)
407 KOG1163 Casein kinase (serine/ 99.9 5.1E-26 1.1E-30 179.2 15.0 204 10-225 14-228 (341)
408 KOG1165 Casein kinase (serine/ 99.9 5.1E-26 1.1E-30 187.0 15.6 201 12-224 29-242 (449)
409 KOG1164 Casein kinase (serine/ 99.9 7.1E-25 1.5E-29 191.3 23.2 204 12-224 19-243 (322)
410 KOG0603 Ribosomal protein S6 k 99.9 5.9E-27 1.3E-31 207.8 6.2 258 18-330 1-269 (612)
411 KOG1240 Protein kinase contain 99.9 4.1E-26 8.8E-31 212.8 8.3 250 12-306 24-291 (1431)
412 PF14531 Kinase-like: Kinase-l 99.9 4E-25 8.6E-30 184.6 13.4 237 12-297 13-288 (288)
413 PRK09188 serine/threonine prot 99.9 5.5E-25 1.2E-29 191.7 13.0 170 8-191 15-194 (365)
414 COG0515 SPS1 Serine/threonine 99.9 4.5E-23 9.7E-28 181.0 24.5 268 13-318 2-287 (384)
415 KOG4158 BRPK/PTEN-induced prot 99.9 1.1E-23 2.3E-28 177.4 14.0 264 5-305 151-512 (598)
416 cd05147 RIO1_euk RIO kinase fa 99.9 7.9E-24 1.7E-28 170.0 11.3 149 15-168 1-168 (190)
417 KOG0195 Integrin-linked kinase 99.9 7.7E-24 1.7E-28 170.0 9.8 246 8-304 187-440 (448)
418 PRK10359 lipopolysaccharide co 99.9 1.2E-23 2.7E-28 170.6 9.0 178 11-212 31-216 (232)
419 KOG0606 Microtubule-associated 99.9 2.1E-23 4.6E-28 194.4 9.2 238 9-327 81-336 (1205)
420 cd05145 RIO1_like RIO kinase f 99.9 1.5E-22 3.3E-27 163.2 12.0 148 15-168 1-168 (190)
421 PRK12274 serine/threonine prot 99.9 2.7E-21 5.8E-26 153.7 13.2 192 13-222 4-211 (218)
422 smart00090 RIO RIO-like kinase 99.8 1.8E-20 3.9E-25 155.5 10.2 151 12-168 29-199 (237)
423 KOG1166 Mitotic checkpoint ser 99.8 4E-20 8.7E-25 175.4 12.6 191 11-216 698-901 (974)
424 PRK10345 hypothetical protein; 99.8 3.1E-19 6.7E-24 144.6 13.6 137 13-164 4-156 (210)
425 KOG1023 Natriuretic peptide re 99.8 9.4E-20 2E-24 162.0 11.2 205 70-305 1-219 (484)
426 PRK14879 serine/threonine prot 99.8 4.4E-19 9.5E-24 145.8 10.6 143 16-166 1-143 (211)
427 TIGR03724 arch_bud32 Kae1-asso 99.8 1.8E-18 3.8E-23 140.9 11.3 139 18-167 1-139 (199)
428 KOG1033 eIF-2alpha kinase PEK/ 99.8 1.6E-19 3.5E-24 157.8 5.4 177 90-309 329-515 (516)
429 cd05144 RIO2_C RIO kinase fami 99.8 2.7E-18 5.8E-23 139.6 10.8 145 12-168 16-176 (198)
430 PRK09605 bifunctional UGMP fam 99.7 6E-18 1.3E-22 157.5 11.4 144 12-167 334-477 (535)
431 KOG0590 Checkpoint kinase and 99.7 2.5E-19 5.4E-24 166.4 -0.6 263 10-311 19-291 (601)
432 cd05119 RIO RIO kinase family, 99.7 3.2E-17 7E-22 132.1 11.5 141 15-168 1-165 (187)
433 KOG0601 Cyclin-dependent kinas 99.7 2E-17 4.3E-22 147.4 8.3 254 11-311 114-384 (524)
434 PRK01723 3-deoxy-D-manno-octul 99.7 1.5E-16 3.3E-21 132.3 12.6 143 17-166 37-191 (239)
435 cd05120 APH_ChoK_like Aminogly 99.6 2.3E-15 5E-20 116.7 9.9 132 15-166 2-138 (155)
436 KOG1243 Protein kinase [Genera 99.6 4.5E-14 9.7E-19 127.5 14.1 185 12-215 14-200 (690)
437 cd05146 RIO3_euk RIO kinase fa 99.5 5.9E-14 1.3E-18 111.8 11.2 147 16-168 2-175 (197)
438 KOG0606 Microtubule-associated 99.5 1E-14 2.2E-19 137.3 5.5 280 9-329 802-1115(1205)
439 KOG3087 Serine/threonine prote 99.5 1E-13 2.2E-18 106.2 9.5 150 15-167 11-166 (229)
440 COG3642 Mn2+-dependent serine/ 99.5 1.2E-13 2.7E-18 106.2 10.0 140 17-167 2-141 (204)
441 KOG1266 Protein kinase [Signal 99.5 3.3E-14 7.1E-19 117.9 6.0 209 68-317 119-342 (458)
442 TIGR01982 UbiB 2-polyprenylphe 99.5 2E-13 4.3E-18 123.3 11.0 149 16-168 122-308 (437)
443 KOG0601 Cyclin-dependent kinas 99.5 3.1E-14 6.7E-19 127.2 5.0 257 6-311 260-519 (524)
444 cd05151 ChoK Choline Kinase (C 99.5 2.2E-13 4.7E-18 107.9 9.2 129 16-166 3-136 (170)
445 PRK04750 ubiB putative ubiquin 99.5 9.2E-14 2E-18 127.0 7.7 152 9-168 118-315 (537)
446 KOG3741 Poly(A) ribonuclease s 99.4 5.8E-12 1.3E-16 110.9 16.9 213 23-306 288-521 (655)
447 KOG2137 Protein kinase [Signal 99.4 3.9E-13 8.4E-18 122.0 4.3 157 128-318 110-277 (700)
448 COG4248 Uncharacterized protei 99.3 6.6E-11 1.4E-15 102.0 16.6 256 14-302 14-292 (637)
449 PF01163 RIO1: RIO1 family; I 99.2 1.9E-10 4.2E-15 91.4 10.7 134 26-168 1-157 (188)
450 cd05154 ACAD10_11_like Acyl-Co 99.2 1.7E-10 3.6E-15 95.5 10.0 142 16-166 3-206 (223)
451 PRK15123 lipopolysaccharide co 99.2 6.6E-10 1.4E-14 93.6 13.2 146 19-166 30-194 (268)
452 COG0478 RIO-like serine/threon 99.2 1.9E-10 4.2E-15 94.1 9.1 145 13-168 93-253 (304)
453 PF06293 Kdo: Lipopolysacchari 99.1 4.5E-09 9.8E-14 85.7 13.1 106 62-167 57-171 (206)
454 PRK09902 hypothetical protein; 99.0 5.8E-09 1.2E-13 83.5 12.6 143 20-166 27-179 (216)
455 PF06176 WaaY: Lipopolysacchar 98.8 2.1E-08 4.6E-13 80.5 9.2 145 11-166 31-183 (229)
456 COG1718 RIO1 Serine/threonine 98.8 2E-08 4.4E-13 81.5 7.9 145 17-168 54-217 (268)
457 COG0661 AarF Predicted unusual 98.7 8E-08 1.7E-12 87.9 8.6 149 17-168 131-316 (517)
458 TIGR02172 Fb_sc_TIGR02172 Fibr 98.7 2.3E-07 5E-12 76.7 10.4 134 17-166 7-182 (226)
459 COG2112 Predicted Ser/Thr prot 98.6 8E-07 1.7E-11 68.5 10.6 132 12-167 23-156 (201)
460 PF01636 APH: Phosphotransfera 98.5 4.1E-07 8.9E-12 75.7 7.5 139 16-166 2-197 (239)
461 KOG0576 Mitogen-activated prot 98.4 7.3E-08 1.6E-12 87.6 -0.1 245 12-313 243-491 (829)
462 KOG1235 Predicted unusual prot 98.4 2.1E-06 4.6E-11 78.4 9.2 146 17-168 167-356 (538)
463 KOG1035 eIF-2alpha kinase GCN2 98.3 4.2E-06 9.1E-11 81.4 11.2 202 65-313 231-441 (1351)
464 cd05150 APH Aminoglycoside 3'- 98.3 6.5E-06 1.4E-10 69.1 10.8 72 18-103 5-78 (244)
465 PF13095 FTA2: Kinetochore Sim 98.2 2.5E-05 5.5E-10 62.3 11.5 134 11-164 37-206 (207)
466 TIGR02721 ycfN_thiK thiamine k 98.1 1.4E-05 3.1E-10 67.5 8.7 135 18-167 3-176 (256)
467 cd05155 APH_ChoK_like_1 Unchar 98.1 2.3E-05 4.9E-10 65.4 9.3 30 137-166 165-194 (235)
468 PLN02876 acyl-CoA dehydrogenas 98.1 3.1E-05 6.8E-10 76.3 11.4 81 15-102 42-129 (822)
469 cd05157 ETNK_euk Ethanolamine 98.1 4.8E-05 1E-09 63.4 10.8 73 16-102 3-77 (235)
470 PF10707 YrbL-PhoP_reg: PhoP r 98.0 9.4E-05 2E-09 59.5 11.6 140 15-163 5-169 (199)
471 PF12260 PIP49_C: Protein-kina 97.9 0.0001 2.3E-09 58.9 10.0 97 65-167 8-112 (188)
472 KOG2268 Serine/threonine prote 97.9 6.4E-06 1.4E-10 69.8 2.9 145 12-167 93-252 (465)
473 KOG2270 Serine/threonine prote 97.9 5.5E-05 1.2E-09 65.3 8.1 150 14-168 147-315 (520)
474 PRK09550 mtnK methylthioribose 97.8 0.00043 9.4E-09 61.8 12.6 82 16-101 31-115 (401)
475 TIGR00938 thrB_alt homoserine 97.8 0.00026 5.6E-09 61.6 10.9 141 14-166 25-217 (307)
476 PRK05231 homoserine kinase; Pr 97.8 0.0004 8.6E-09 60.8 12.1 31 136-166 187-217 (319)
477 cd05156 ChoK_euk Choline Kinas 97.8 0.00016 3.4E-09 62.9 9.2 30 137-166 180-213 (302)
478 cd05153 HomoserineK_II Homoser 97.7 0.0002 4.3E-09 62.0 8.5 139 15-166 18-205 (296)
479 KOG1093 Predicted protein kina 97.5 0.00023 4.9E-09 64.2 6.2 173 62-312 28-200 (725)
480 COG3173 Predicted aminoglycosi 97.5 0.0011 2.3E-08 57.3 9.9 32 137-168 199-230 (321)
481 TIGR01767 MTRK 5-methylthiorib 97.5 0.0023 4.9E-08 56.1 12.0 77 18-101 2-84 (370)
482 cd05152 MPH2' Macrolide 2'-Pho 97.4 0.00091 2E-08 57.1 8.4 30 137-166 186-216 (276)
483 PLN02421 phosphotransferase, a 97.4 0.0016 3.5E-08 57.2 10.0 30 138-167 184-214 (330)
484 PLN02236 choline kinase 97.3 0.0014 3E-08 57.9 8.8 138 15-166 40-231 (344)
485 PRK12396 5-methylribose kinase 97.2 0.004 8.6E-08 55.3 10.3 81 16-100 34-116 (409)
486 PLN02756 S-methyl-5-thioribose 96.9 0.016 3.4E-07 51.9 11.6 81 15-101 36-119 (418)
487 PTZ00384 choline kinase; Provi 96.9 0.0079 1.7E-07 53.8 9.8 30 136-166 227-256 (383)
488 TIGR02904 spore_ysxE spore coa 96.9 0.016 3.5E-07 50.5 11.2 30 137-166 197-226 (309)
489 COG5072 ALK1 Serine/threonine 96.7 0.0073 1.6E-07 52.6 7.5 90 73-168 282-372 (488)
490 KOG1826 Ras GTPase activating 96.7 0.00045 9.6E-09 69.9 0.1 153 66-219 1279-1441(2724)
491 PRK10593 hypothetical protein; 96.6 0.014 3E-07 50.5 8.9 108 12-136 15-127 (297)
492 PTZ00296 choline kinase; Provi 96.4 0.021 4.5E-07 52.1 9.2 29 137-166 285-313 (442)
493 PRK06148 hypothetical protein; 96.2 0.06 1.3E-06 54.6 12.0 31 136-166 203-236 (1013)
494 PF03881 Fructosamin_kin: Fruc 96.1 0.085 1.8E-06 45.2 10.7 75 13-101 19-96 (288)
495 TIGR02906 spore_CotS spore coa 95.4 0.036 7.8E-07 48.2 6.0 29 136-165 187-215 (313)
496 PRK10271 thiK thiamine kinase; 95.2 0.018 3.9E-07 45.7 3.1 29 138-167 79-107 (188)
497 COG0510 ycfN Thiamine kinase a 95.1 0.039 8.5E-07 46.8 4.9 46 122-167 137-184 (269)
498 PF01633 Choline_kinase: Choli 94.5 0.073 1.6E-06 43.4 5.0 30 137-166 144-174 (211)
499 KOG1033 eIF-2alpha kinase PEK/ 94.4 0.0057 1.2E-07 55.2 -1.8 81 1-88 39-119 (516)
500 KOG1236 Predicted unusual prot 93.7 0.15 3.3E-06 45.4 5.5 60 92-152 320-380 (565)
No 1
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=1.2e-60 Score=389.65 Aligned_cols=316 Identities=70% Similarity=1.166 Sum_probs=294.2
Q ss_pred cccccchhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeee
Q 035861 4 LQGCRSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKE 83 (332)
Q Consensus 4 ~~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~ 83 (332)
+.||+++++|+.+..|++|.||.||+|+++.|++.||+|.++..... ..+....++|+.+|.+++||||+.+..
T Consensus 69 l~gCrsv~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek------~GFPItsLREIniLl~~~H~NIV~vkE 142 (419)
T KOG0663|consen 69 LGGCRSVEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEK------EGFPITSLREINILLKARHPNIVEVKE 142 (419)
T ss_pred ccCcccHHHHHHHhhcccCcceeEEEeccCCcceeEEeeeccccccc------CCCcchhHHHHHHHHhcCCCCeeeeEE
Confidence 78999999999999999999999999999999999999999876532 234445689999999999999999999
Q ss_pred eEEcC-CCeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecc
Q 035861 84 VVMDD-HDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFG 162 (332)
Q Consensus 84 ~~~~~-~~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~ 162 (332)
+.+.. -+..|+|||||+.++...+.....+|.+.+++.+..|++.||+|||.+.|+|||||++|+|++..|.+||+|||
T Consensus 143 VVvG~~~d~iy~VMe~~EhDLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~~~G~lKiaDFG 222 (419)
T KOG0663|consen 143 VVVGSNMDKIYIVMEYVEHDLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLSHKGILKIADFG 222 (419)
T ss_pred EEeccccceeeeeHHHHHhhHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheeeccCCcEEecccc
Confidence 98543 35699999999999999999888899999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcc
Q 035861 163 MSRQYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIW 242 (332)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 242 (332)
+|+.++++...++....|.+|+|||.+.+...|+.+.|+||+||++.|++++.+.|.+....+.+.+|++.++.|.+..|
T Consensus 223 LAR~ygsp~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iw 302 (419)
T KOG0663|consen 223 LAREYGSPLKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIW 302 (419)
T ss_pred hhhhhcCCcccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCccc-cccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCCCCCCCCCC
Q 035861 243 PGLSELPGA-KANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVPLPKSKDFM 321 (332)
Q Consensus 243 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~~~~~~~ 321 (332)
|++..+++- +..+...+++.++..++... ++....+|+..+|..||.+|.||+|.|+|+||.+.+.+..-..+
T Consensus 303 pg~~~lp~~k~~~f~~~pyn~lr~kF~~~~------lse~g~~Lln~llt~dP~kR~tA~~~L~h~~F~e~P~p~~P~~~ 376 (419)
T KOG0663|consen 303 PGYSELPAVKKMTFSEHPYNNLRKKFGALS------LSEQGFDLLNKLLTYDPGKRITAEDGLKHEYFRETPLPIDPSMF 376 (419)
T ss_pred CCccccchhhccccCCCCchhhhhhccccc------cchhHHHHHHHHhccCccccccHHHhhcccccccCCCCCChhhc
Confidence 999999987 58899999999998887654 67899999999999999999999999999999999999999999
Q ss_pred CCCCCccccC
Q 035861 322 PTFPPQHARN 331 (332)
Q Consensus 322 ~~~~~~~~~~ 331 (332)
|+||++...+
T Consensus 377 Pt~P~k~~~~ 386 (419)
T KOG0663|consen 377 PTWPAKSEQQ 386 (419)
T ss_pred CCCccccccc
Confidence 9999887654
No 2
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=7.5e-59 Score=388.80 Aligned_cols=283 Identities=33% Similarity=0.482 Sum_probs=230.3
Q ss_pred chhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcC
Q 035861 9 SVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDD 88 (332)
Q Consensus 9 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 88 (332)
..+.|.+.+.||+|+||.|-+|..+.|++.||||++.++....... +........+|+++|++|+||+|+++++++ +.
T Consensus 170 ~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~-~~~~~~~v~~EieILkkL~HP~IV~~~d~f-~~ 247 (475)
T KOG0615|consen 170 FNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSR-AIAKTRDVQNEIEILKKLSHPNIVRIKDFF-EV 247 (475)
T ss_pred hcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccc-cccchhhhHHHHHHHHhcCCCCEEEEeeee-ec
Confidence 3457888999999999999999999999999999998765544322 222223457999999999999999999999 55
Q ss_pred CCeEEEEccccccc-HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCC---CcEEEeecccc
Q 035861 89 HDSVYMVMEYMEHD-LKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQ---GVLKICDFGMS 164 (332)
Q Consensus 89 ~~~~~lv~e~~~~~-l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~---~~~~l~df~~~ 164 (332)
..+.|+||||++|+ +.+.+. .++.+.+...+.+++||+.|+.|||+.||+||||||+|||+..+ ..+||+|||+|
T Consensus 248 ~ds~YmVlE~v~GGeLfd~vv-~nk~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~e~~llKItDFGlA 326 (475)
T KOG0615|consen 248 PDSSYMVLEYVEGGELFDKVV-ANKYLREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDAEDCLLKITDFGLA 326 (475)
T ss_pred CCceEEEEEEecCccHHHHHH-hccccccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccCCcceEEEecccchh
Confidence 57889999999975 555554 48899999999999999999999999999999999999999877 68999999999
Q ss_pred cccCCCCCCCccccccccccchhhhcCCC--CCCchhHHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHcCCCCCCc
Q 035861 165 RQYGSPLKPYTSLVVTLWYRAPELLLGAK--KYSTAVDMWSVGCIMAELLAKKPLFSGTTEVD-QIDKIFKTLGTPTETI 241 (332)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~--~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~-~~~~~~~~~~~~~~~~ 241 (332)
+..+ ...-..+.|||+.|.|||++.+.+ .+..+.|+|||||++|-+++|.+||....... ..+++.++.-..-..
T Consensus 327 K~~g-~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~G~y~f~p~- 404 (475)
T KOG0615|consen 327 KVSG-EGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILKGRYAFGPL- 404 (475)
T ss_pred hccc-cceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHHHhcCcccccCh-
Confidence 9875 445667899999999999997633 24458899999999999999999998865554 555565542222211
Q ss_pred ccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCCCCCCCCCC
Q 035861 242 WPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVPLPKSKDFM 321 (332)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~~~~~~~ 321 (332)
.+..+|.++++||.+||..||++|||+.|+|+||||+..+........
T Consensus 405 --------------------------------~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~hpW~~~~~~~s~~~~l 452 (475)
T KOG0615|consen 405 --------------------------------QWDRISEEALDLINWMLVVDPENRPSADEALNHPWFKDAPCLSKQDIL 452 (475)
T ss_pred --------------------------------hhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcChhhhcccccchHHHH
Confidence 123389999999999999999999999999999999998855554444
Q ss_pred CCCCCcc
Q 035861 322 PTFPPQH 328 (332)
Q Consensus 322 ~~~~~~~ 328 (332)
..+.|..
T Consensus 453 ~~~~~l~ 459 (475)
T KOG0615|consen 453 KKLQPLS 459 (475)
T ss_pred hhcCccc
Confidence 4444443
No 3
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.9e-58 Score=389.31 Aligned_cols=295 Identities=40% Similarity=0.723 Sum_probs=257.3
Q ss_pred ccccchhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCC-CCCeeeeee
Q 035861 5 QGCRSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFD-HPSIVNVKE 83 (332)
Q Consensus 5 ~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~ 83 (332)
+....+++|.++++||.|.||.||+|+...+++.||||.++.+-...+.+.. ++|+..|++++ ||||+++++
T Consensus 4 ~~~~~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~n-------LREvksL~kln~hpniikL~E 76 (538)
T KOG0661|consen 4 TQVIFMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMN-------LREVKSLRKLNPHPNIIKLKE 76 (538)
T ss_pred eehhHHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHH-------HHHHHHHHhcCCCCcchhhHH
Confidence 4455788999999999999999999999999999999999988777666654 59999999998 999999999
Q ss_pred eEEcCCCeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeeccc
Q 035861 84 VVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGM 163 (332)
Q Consensus 84 ~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~ 163 (332)
++.+.+..+++||||++.++.+.+..+++.|++..+..|++||++||+|+|++|+.|||+||+|||+..+..+||+|||+
T Consensus 77 vi~d~~~~L~fVfE~Md~NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~~~~~iKiaDFGL 156 (538)
T KOG0661|consen 77 VIRDNDRILYFVFEFMDCNLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILISGNDVIKIADFGL 156 (538)
T ss_pred HhhccCceEeeeHHhhhhhHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEecccceeEeccccc
Confidence 99888669999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCccc
Q 035861 164 SRQYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWP 243 (332)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (332)
|+...+ ..+++....|.||+|||++.....|+.+.|+|++||+++|+.+.++.|.+.+..+.+.+|..-++.|....|+
T Consensus 157 ARev~S-kpPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~ 235 (538)
T KOG0661|consen 157 AREVRS-KPPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWP 235 (538)
T ss_pred cccccc-CCCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccch
Confidence 998754 4677888899999999999888999999999999999999999999999999999999999999999988776
Q ss_pred CCCCCcc-ccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCCCC
Q 035861 244 GLSELPG-AKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVPLP 315 (332)
Q Consensus 244 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~ 315 (332)
.-.++.. ....+.+.........+ +..+.++.+||.+|+++||.+||+|.++|+||||+.-.-.
T Consensus 236 eg~~La~~mnf~~P~~~~~~l~~L~--------p~~s~~~~~li~~ll~WDP~kRpTA~~al~~pffq~~~~~ 300 (538)
T KOG0661|consen 236 EGYNLASAMNFRFPQVKPSPLKDLL--------PNASSEAASLIERLLAWDPDKRPTASQALQHPFFQVGRAS 300 (538)
T ss_pred hHHHHHHHhccCCCcCCCCChHHhC--------cccCHHHHHHHHHHhcCCCccCccHHHHhcCccccccccc
Confidence 5322211 22222222222222222 3378899999999999999999999999999999986533
No 4
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.1e-56 Score=391.53 Aligned_cols=274 Identities=32% Similarity=0.478 Sum_probs=240.0
Q ss_pred hcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCC
Q 035861 11 FEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHD 90 (332)
Q Consensus 11 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 90 (332)
.+|...+.||+|||+.||.+++..+|+.||+|++.+....+.... ..+.+|+++-+.|.||||+.++++| ++..
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~r-----eKv~~EIeIHr~L~HpnIV~f~~~F-EDs~ 91 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQR-----EKVLNEIEIHRSLKHPNIVQFYHFF-EDSN 91 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchH-----HHHHHHHHHHHhcCCCcEEeeeeEe-ecCC
Confidence 369999999999999999999999999999999987655443333 3577999999999999999999999 6669
Q ss_pred eEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCCC
Q 035861 91 SVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSP 170 (332)
Q Consensus 91 ~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~~ 170 (332)
+.|||+|.|..+.+..+.++.++++|.+++.+.+||+.||.|||+++|+|||||..|+|++++.+|||+|||+|.....+
T Consensus 92 nVYivLELC~~~sL~el~Krrk~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~ 171 (592)
T KOG0575|consen 92 NVYIVLELCHRGSLMELLKRRKPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYD 171 (592)
T ss_pred ceEEEEEecCCccHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheeecCcCcEEecccceeeeecCc
Confidence 99999999998777777778899999999999999999999999999999999999999999999999999999999877
Q ss_pred CCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCCcc
Q 035861 171 LKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPG 250 (332)
Q Consensus 171 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (332)
.....+.|||+-|.|||++.. ..++..+||||+||+||-|+.|++||...+..+++.++....-..|.
T Consensus 172 ~Erk~TlCGTPNYIAPEVl~k-~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~Ik~~~Y~~P~----------- 239 (592)
T KOG0575|consen 172 GERKKTLCGTPNYIAPEVLNK-SGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKIKLNEYSMPS----------- 239 (592)
T ss_pred ccccceecCCCcccChhHhcc-CCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHHHhcCccccc-----------
Confidence 777789999999999999986 77899999999999999999999999999999999998765332222
Q ss_pred ccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCCCCCC-CCCCCCCCCcc
Q 035861 251 AKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVPLPKS-KDFMPTFPPQH 328 (332)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~~~-~~~~~~~~~~~ 328 (332)
.+|.++++||.+||+.||.+|||+++||.|+||++--.|+. ....-+..|.+
T Consensus 240 --------------------------~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h~Ff~~g~~p~~lp~~~l~~~p~~ 292 (592)
T KOG0575|consen 240 --------------------------HLSAEAKDLIRKLLRPNPSERPSLDEVLDHPFFKSGFTPARLPSSCLTMVPRF 292 (592)
T ss_pred --------------------------ccCHHHHHHHHHHhcCCcccCCCHHHHhcCHhhhCCCcCCCCCccccccCCcC
Confidence 37999999999999999999999999999999955454443 33444444443
No 5
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=4.1e-56 Score=352.63 Aligned_cols=293 Identities=45% Similarity=0.854 Sum_probs=260.3
Q ss_pred hcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCC
Q 035861 11 FEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHD 90 (332)
Q Consensus 11 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 90 (332)
.+|..++++|+|.||.||+|++..||+.||||.+....... ++....++|++.|+.+.|+||+.+++++ ....
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kd------Gi~~talREIK~Lqel~h~nIi~LiD~F-~~~~ 74 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKD------GINRTALREIKLLQELKHPNIIELIDVF-PHKS 74 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeecccccc------CccHHHHHHHHHHHHccCcchhhhhhhc-cCCC
Confidence 58999999999999999999999999999999998764332 3344678999999999999999999999 4447
Q ss_pred eEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCCC
Q 035861 91 SVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSP 170 (332)
Q Consensus 91 ~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~~ 170 (332)
...||+||++.++...+...+..++...+..++.+++.||+|||++.|+||||||.|+||+.+|.+||+|||+++...++
T Consensus 75 ~l~lVfEfm~tdLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p 154 (318)
T KOG0659|consen 75 NLSLVFEFMPTDLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISSDGQLKIADFGLARFFGSP 154 (318)
T ss_pred ceEEEEEeccccHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEcCCCcEEeecccchhccCCC
Confidence 78999999999999999988899999999999999999999999999999999999999999999999999999999887
Q ss_pred CCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCCcc
Q 035861 171 LKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPG 250 (332)
Q Consensus 171 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (332)
.........|.+|+|||.+.+.+.|+...|+||.||++.|++.+.+.|.+.++.+.+..+++.++.|.+..||++..++.
T Consensus 155 ~~~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpd 234 (318)
T KOG0659|consen 155 NRIQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPD 234 (318)
T ss_pred CcccccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCcccccccc
Confidence 77777778899999999999999999999999999999999999999999999999999999999999999999998876
Q ss_pred ccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCCCCCCCC
Q 035861 251 AKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVPLPKSKD 319 (332)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~~~~~ 319 (332)
...-. ..+.......+ +..++++.+|+.+||..||.+|+++.|+|+|+||++.+.+..-.
T Consensus 235 Y~~~~-~~P~~~~~~lf--------~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~yf~~~P~pt~~~ 294 (318)
T KOG0659|consen 235 YVKIQ-QFPKPPLNNLF--------PAASSDALDLLSKMLTYNPKKRITASQALKHPYFKSLPLPTPPS 294 (318)
T ss_pred HHHHh-cCCCCcccccc--------ccccHHHHHHHHhhhccCchhcccHHHHhcchhhhcCCCCCChh
Confidence 43222 33333333332 23678889999999999999999999999999999988666543
No 6
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-56 Score=372.27 Aligned_cols=265 Identities=28% Similarity=0.422 Sum_probs=225.1
Q ss_pred chhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcC
Q 035861 9 SVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDD 88 (332)
Q Consensus 9 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 88 (332)
..++.+.++.||+|+.|+||+++++.|++.+|+|++...... . ..+++.+|+++++.++||+|+.+++.|..+
T Consensus 77 ~~~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~---~----~~~Qi~rEl~il~~~~spyIV~~ygaF~~~ 149 (364)
T KOG0581|consen 77 SLSDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDP---A----LQKQILRELEILRSCQSPYIVGFYGAFYSN 149 (364)
T ss_pred CHHHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCH---H----HHHHHHHHHHHHhhCCCCCeeeEeEEEEeC
Confidence 456889999999999999999999999999999999543221 1 123688999999999999999999999766
Q ss_pred CCeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH-CCcccccCCCCCEEEcCCCcEEEeeccccccc
Q 035861 89 HDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHD-NWVLHRDLKTSNLLLNNQGVLKICDFGMSRQY 167 (332)
Q Consensus 89 ~~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~-~~i~H~di~p~Nili~~~~~~~l~df~~~~~~ 167 (332)
....+|+||||+|+.++.+....+.++|..+..++.++++||.|||+ ++|+||||||+||||...|.|||+|||.+...
T Consensus 150 ~~~isI~mEYMDgGSLd~~~k~~g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNskGeVKicDFGVS~~l 229 (364)
T KOG0581|consen 150 GEEISICMEYMDGGSLDDILKRVGRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNSKGEVKICDFGVSGIL 229 (364)
T ss_pred CceEEeehhhcCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeeccCCCEEeccccccHHh
Confidence 33699999999998888888777999999999999999999999995 99999999999999999999999999999887
Q ss_pred CCCCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCC-----ChHHHHHHHHHHcCCCCCCcc
Q 035861 168 GSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGT-----TEVDQIDKIFKTLGTPTETIW 242 (332)
Q Consensus 168 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~-----~~~~~~~~~~~~~~~~~~~~~ 242 (332)
... ...+..||..|||||.+.+ ..|+.++||||||+.++|+++|+.||... ...+.+..|....++...
T Consensus 230 vnS--~a~tfvGT~~YMsPERi~g-~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~ppP~lP--- 303 (364)
T KOG0581|consen 230 VNS--IANTFVGTSAYMSPERISG-ESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVDEPPPRLP--- 303 (364)
T ss_pred hhh--hcccccccccccChhhhcC-CcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhcCCCCCCC---
Confidence 544 4567889999999999998 78999999999999999999999999874 333444444332111110
Q ss_pred cCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCCCCCCC
Q 035861 243 PGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVPLPKSK 318 (332)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~~~~ 318 (332)
....|+++++||..||++||.+||++.|+++|||+++...+..+
T Consensus 304 --------------------------------~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~Hpfi~~~~~~~vd 347 (364)
T KOG0581|consen 304 --------------------------------EGEFSPEFRSFVSCCLRKDPSERPSAKQLLQHPFIKKFEDPNVD 347 (364)
T ss_pred --------------------------------cccCCHHHHHHHHHHhcCCcccCCCHHHHhcCHHHhhccccccc
Confidence 11389999999999999999999999999999999987765553
No 7
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=2.6e-56 Score=370.28 Aligned_cols=279 Identities=31% Similarity=0.491 Sum_probs=243.7
Q ss_pred cchhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEc
Q 035861 8 RSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMD 87 (332)
Q Consensus 8 ~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~ 87 (332)
...++|++++.||+|+||+|++++.+.|++.+|+|++.+....... .......|..+|.+++||+|++++..| +
T Consensus 22 ~~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~-----e~~~~~~Er~IL~~v~hPFiv~l~ysF-Q 95 (357)
T KOG0598|consen 22 VGPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKK-----EVRHTKAERNILSKIKHPFIVKLIYSF-Q 95 (357)
T ss_pred CChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhh-----hHHHHHHHHHHHHhCCCCcEeeeEEec-c
Confidence 4578999999999999999999999999999999999876554331 123567899999999999999999999 5
Q ss_pred CCCeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeeccccccc
Q 035861 88 DHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQY 167 (332)
Q Consensus 88 ~~~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~ 167 (332)
+...+|+|+||+.|+-+.....+.+.+++..+..++..|+.||.|||++||+||||||+|||++.+|+++|+|||+|+..
T Consensus 96 t~~kLylVld~~~GGeLf~hL~~eg~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~ 175 (357)
T KOG0598|consen 96 TEEKLYLVLDYLNGGELFYHLQREGRFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILLDEQGHIKLTDFGLCKED 175 (357)
T ss_pred cCCeEEEEEeccCCccHHHHHHhcCCcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeeecCCCcEEEeccccchhc
Confidence 55899999999998666666666899999999999999999999999999999999999999999999999999999866
Q ss_pred CCCCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCC
Q 035861 168 GSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSE 247 (332)
Q Consensus 168 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (332)
-.....-.+.+||+.|+|||++.. ..++.++|.||||+++|+|++|..||.+.+.....+++.+.-...
T Consensus 176 ~~~~~~t~tfcGT~eYmAPEil~~-~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I~~~k~~~---------- 244 (357)
T KOG0598|consen 176 LKDGDATRTFCGTPEYMAPEILLG-KGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKILKGKLPL---------- 244 (357)
T ss_pred ccCCCccccccCCccccChHHHhc-CCCCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHHHhcCcCCC----------
Confidence 554455567899999999999998 689999999999999999999999999999999999887753111
Q ss_pred CccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCC----CHHHHhcCCCCCCCCCCCC--CCCC
Q 035861 248 LPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRI----TVDDALNHYWFHEVPLPKS--KDFM 321 (332)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp----s~~ell~hp~f~~~~~~~~--~~~~ 321 (332)
.+..++.++++||+++|..||++|. ++++|-+||||..++|.+. ....
T Consensus 245 --------------------------~p~~ls~~ardll~~LL~rdp~~RLg~~~d~~~ik~HpfF~~inW~~l~~k~l~ 298 (357)
T KOG0598|consen 245 --------------------------PPGYLSEEARDLLKKLLKRDPRQRLGGPGDAEEIKRHPFFKGINWEKLLAKKLS 298 (357)
T ss_pred --------------------------CCccCCHHHHHHHHHHhccCHHHhcCCCCChHHhhcCcccccCCHHHHHhcCCC
Confidence 1222799999999999999999995 7999999999999999887 4577
Q ss_pred CCCCCccc
Q 035861 322 PTFPPQHA 329 (332)
Q Consensus 322 ~~~~~~~~ 329 (332)
|+|.|.-+
T Consensus 299 PpF~P~~~ 306 (357)
T KOG0598|consen 299 PPFKPNVT 306 (357)
T ss_pred CCeecCCC
Confidence 78887654
No 8
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.8e-55 Score=377.12 Aligned_cols=309 Identities=51% Similarity=0.887 Sum_probs=266.6
Q ss_pred ccccchhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeee
Q 035861 5 QGCRSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEV 84 (332)
Q Consensus 5 ~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~ 84 (332)
++.+..+.|+.+++||+|.||.||+|++..+|+.||+|+++......... ....+|+.+|++|.||||+++.++
T Consensus 111 w~~r~~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~------~t~~REI~ILr~l~HpNIikL~ei 184 (560)
T KOG0600|consen 111 WGPRRADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFP------ITAIREIKILRRLDHPNIIKLEEI 184 (560)
T ss_pred ccccchHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcch------HHHHHHHHHHHhcCCCcccceeeE
Confidence 56677889999999999999999999999999999999998765433322 234699999999999999999999
Q ss_pred EEcC-CCeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeeccc
Q 035861 85 VMDD-HDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGM 163 (332)
Q Consensus 85 ~~~~-~~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~ 163 (332)
+.+. ...+|+|+||++.+|...+....-.|++.+++.++.||+.||+|||++|++|||||.+||||+.+|.+||+|||+
T Consensus 185 vt~~~~~siYlVFeYMdhDL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLidn~G~LKiaDFGL 264 (560)
T KOG0600|consen 185 VTSKLSGSIYLVFEYMDHDLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILIDNNGVLKIADFGL 264 (560)
T ss_pred EEecCCceEEEEEecccchhhhhhcCCCcccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEEcCCCCEEeccccc
Confidence 9776 578999999999999888877667899999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCC-CCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcc
Q 035861 164 SRQYGSPL-KPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIW 242 (332)
Q Consensus 164 ~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 242 (332)
|++++... ..++....|.||+|||.+.+...|+.+.|+||.||||.||++|++.|.+.+..+.+..|++..+.|.+..|
T Consensus 265 Ar~y~~~~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W 344 (560)
T KOG0600|consen 265 ARFYTPSGSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYW 344 (560)
T ss_pred eeeccCCCCcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhcc
Confidence 99775443 34777888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCccccccccCCchh-hhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCCCCCCCCCC
Q 035861 243 PGLSELPGAKANFAKQPYN-LLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVPLPKSKDFM 321 (332)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~~~~~~~ 321 (332)
+ ..+++..........+. .+++.+ ..++....+|+..||..||.+|.||.++|+|+||..-+.+-.-..+
T Consensus 345 ~-~~kLP~~~~~kp~~~y~r~l~E~~--------~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~seyF~t~p~~~~p~~L 415 (560)
T KOG0600|consen 345 P-VSKLPHATIFKPQQPYKRRLRETF--------KDFPASALDLLEKLLSLDPDKRGTASSALQSEYFTTEPLPCDPSSL 415 (560)
T ss_pred c-cccCCcccccCCCCcccchHHHHh--------ccCCHHHHHHHHHHhccCccccccHHHHhcCcccccCCCCCCcccC
Confidence 8 66666433333333222 222222 2378899999999999999999999999999999776777767778
Q ss_pred CCCCCcc
Q 035861 322 PTFPPQH 328 (332)
Q Consensus 322 ~~~~~~~ 328 (332)
+.++|-+
T Consensus 416 p~y~~s~ 422 (560)
T KOG0600|consen 416 PKYPPSH 422 (560)
T ss_pred CCCCcch
Confidence 8777754
No 9
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=2.7e-56 Score=359.79 Aligned_cols=289 Identities=35% Similarity=0.627 Sum_probs=243.1
Q ss_pred hhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCC
Q 035861 10 VFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDH 89 (332)
Q Consensus 10 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 89 (332)
++.|+.+.++|+|++|+||+++++.||+.||||++..+.... .+.+-.++|+++|+++.|+|++.++++| ...
T Consensus 1 MekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~------~VkKIAlREIrmLKqLkH~NLVnLiEVF-rrk 73 (396)
T KOG0593|consen 1 MEKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDP------VVKKIALREIRMLKQLKHENLVNLIEVF-RRK 73 (396)
T ss_pred CcHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccH------HHHHHHHHHHHHHHhcccchHHHHHHHH-Hhc
Confidence 468999999999999999999999999999999997654322 2223457999999999999999999999 555
Q ss_pred CeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCC
Q 035861 90 DSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGS 169 (332)
Q Consensus 90 ~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~ 169 (332)
..+++|+|||+.+.++.+......+++..+..+++|++.|+.|+|+++++||||||+||||+.+|.+||||||+|+....
T Consensus 74 rklhLVFE~~dhTvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~ 153 (396)
T KOG0593|consen 74 RKLHLVFEYCDHTVLHELERYPNGVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILITQNGVVKLCDFGFARTLSA 153 (396)
T ss_pred ceeEEEeeecchHHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEEecCCcEEeccchhhHhhcC
Confidence 88999999999999999999888999999999999999999999999999999999999999999999999999999887
Q ss_pred CCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCCc
Q 035861 170 PLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELP 249 (332)
Q Consensus 170 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (332)
+...++...-|.||+|||.+.+..+|..+.|||++||++.||++|.+.|.+.++.+.+-.|.+.++........-+..-+
T Consensus 154 pgd~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~ 233 (396)
T KOG0593|consen 154 PGDNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNP 233 (396)
T ss_pred CcchhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCC
Confidence 88888888999999999999998999999999999999999999999999999999999998887766544322221100
Q ss_pred cccc--cccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCC
Q 035861 250 GAKA--NFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVP 313 (332)
Q Consensus 250 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~ 313 (332)
-... --.......++. .-+.++.-+.+|+.+||+.||++|++.+++|.||||.++-
T Consensus 234 ~F~Gv~lP~~~~~epLe~--------k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H~yFd~~~ 291 (396)
T KOG0593|consen 234 FFHGVRLPEPEHPEPLER--------KYPKISNVLLDLLKKCLKMDPDDRLSCEQLLHHPYFDGFI 291 (396)
T ss_pred ceeeeecCCCCCccchhh--------hcccchHHHHHHHHHHhcCCccccccHHHHhcChHHHHHH
Confidence 0000 000001111111 1244777889999999999999999999999999996653
No 10
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-53 Score=343.42 Aligned_cols=272 Identities=31% Similarity=0.499 Sum_probs=239.5
Q ss_pred cchhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEc
Q 035861 8 RSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMD 87 (332)
Q Consensus 8 ~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~ 87 (332)
..+++|+.+..||.|+||.|.+++.+.+|..+|+|++.+...-+....+ ...+|..+|+.+.||+++.+.+.+ .
T Consensus 41 ~~l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQve-----H~~nEk~vL~~v~~PFlv~l~~t~-~ 114 (355)
T KOG0616|consen 41 YSLQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVE-----HTHNEKRVLKAVSHPFLVKLYGTF-K 114 (355)
T ss_pred cchhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHH-----HHhhHHHHHhhccCceeEEEEEee-c
Confidence 5788999999999999999999999999999999999876543322222 456899999999999999999999 5
Q ss_pred CCCeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeeccccccc
Q 035861 88 DHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQY 167 (332)
Q Consensus 88 ~~~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~ 167 (332)
+..++|+||||++|+-+....++-+.+++..++.++.||+.||+|||+++|++|||||+|||+|++|.+||+|||+++..
T Consensus 115 d~~~lymvmeyv~GGElFS~Lrk~~rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v 194 (355)
T KOG0616|consen 115 DNSNLYMVMEYVPGGELFSYLRKSGRFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLLDQNGHIKITDFGFAKRV 194 (355)
T ss_pred cCCeEEEEEeccCCccHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeeeccCCcEEEEeccceEEe
Confidence 55899999999998766666666789999999999999999999999999999999999999999999999999999987
Q ss_pred CCCCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCC
Q 035861 168 GSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSE 247 (332)
Q Consensus 168 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (332)
... --+.|||+.|+|||++.. +.++.++|.|+||+++|||+.|.+||.+.+...++.+|....-..|
T Consensus 195 ~~r---T~TlCGTPeYLAPEii~s-k~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY~KI~~~~v~fP--------- 261 (355)
T KOG0616|consen 195 SGR---TWTLCGTPEYLAPEIIQS-KGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIYEKILEGKVKFP--------- 261 (355)
T ss_pred cCc---EEEecCCccccChHHhhc-CCCCcchhHHHHHHHHHHHHcCCCCCcCCChHHHHHHHHhCcccCC---------
Confidence 543 357899999999999988 7899999999999999999999999999999999999987643322
Q ss_pred CccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCC-----CHHHHhcCCCCCCCCCCCC--CCC
Q 035861 248 LPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRI-----TVDDALNHYWFHEVPLPKS--KDF 320 (332)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp-----s~~ell~hp~f~~~~~~~~--~~~ 320 (332)
+..++.+++||+++|+.|-.+|. ..++|-.||||+.+.|..+ +..
T Consensus 262 ----------------------------~~fs~~~kdLl~~LL~vD~t~R~gnlknG~~dIk~H~wF~~v~W~~i~~r~i 313 (355)
T KOG0616|consen 262 ----------------------------SYFSSDAKDLLKKLLQVDLTKRFGNLKNGVEDIKNHPWFKGVDWEAILQRKI 313 (355)
T ss_pred ----------------------------cccCHHHHHHHHHHHhhhhHhhhcCcCCCccccccCcccccccHHHHhhccc
Confidence 23799999999999999999993 6789999999999999887 557
Q ss_pred CCCCCC
Q 035861 321 MPTFPP 326 (332)
Q Consensus 321 ~~~~~~ 326 (332)
.+++-|
T Consensus 314 e~P~~p 319 (355)
T KOG0616|consen 314 EPPFEP 319 (355)
T ss_pred cCCCCC
Confidence 777766
No 11
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=4e-52 Score=344.97 Aligned_cols=294 Identities=47% Similarity=0.902 Sum_probs=257.8
Q ss_pred hhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCC-eeeeeeeEEcC
Q 035861 10 VFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPS-IVNVKEVVMDD 88 (332)
Q Consensus 10 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~-i~~~~~~~~~~ 88 (332)
+..|+.+++||+|++|+||+|+...+|+.||+|+++..... ..+.....+|+.+++.++|+| |+.+++++..+
T Consensus 10 ~~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~------EG~P~taiREisllk~L~~~~~iv~L~dv~~~~ 83 (323)
T KOG0594|consen 10 MFDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEE------EGVPSTAIREISLLKRLSHANHIVRLHDVIHTS 83 (323)
T ss_pred HHHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccc------cCCCchhhHHHHHHHHhCCCcceEEEEeeeeec
Confidence 66799999999999999999999999999999999876542 123335579999999999999 99999999776
Q ss_pred CC-----eEEEEcccccccHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEee
Q 035861 89 HD-----SVYMVMEYMEHDLKWLMESMK---QPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICD 160 (332)
Q Consensus 89 ~~-----~~~lv~e~~~~~l~~~~~~~~---~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~d 160 (332)
.. ..++|+|+++.++...+.... ..++...++.+++||+.||+|||++||+||||||.||+|+++|.+||+|
T Consensus 84 ~~~~~~~~l~lvfe~~d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~~~G~lKlaD 163 (323)
T KOG0594|consen 84 NNHRGIGKLYLVFEFLDRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLISSSGVLKLAD 163 (323)
T ss_pred ccccccceEEEEEEeecccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEECCCCcEeeec
Confidence 53 899999999999988888766 4688899999999999999999999999999999999999999999999
Q ss_pred cccccccCCCCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCC
Q 035861 161 FGMSRQYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTET 240 (332)
Q Consensus 161 f~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 240 (332)
||+|+...-+...+....+|.+|+|||++.+...|+...||||+||++.||+++...|.+..+.+....+++..+.|.+.
T Consensus 164 FGlAra~~ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~ 243 (323)
T KOG0594|consen 164 FGLARAFSIPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEK 243 (323)
T ss_pred cchHHHhcCCcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCcc
Confidence 99999887777778888999999999999998899999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCccccccccCCc-hhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCCCCCC
Q 035861 241 IWPGLSELPGAKANFAKQP-YNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVPLPKS 317 (332)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~~~ 317 (332)
.||+...++..+..+.... ....... -+..+++..+++.+||+.+|..|.|++.+|+||||..+.....
T Consensus 244 ~Wp~v~~~~~~k~~f~~~~~~~~l~~~--------~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~~~~~~~ 313 (323)
T KOG0594|consen 244 DWPGVSSLPDYKAPFPKWPGPKDLSSI--------LPKLDPDGIELLSKLLQYDPAKRISAKGALTHPYFSELPEKSS 313 (323)
T ss_pred CCCCccccccccccCcCCCCccchHHh--------ccccCccHHHHHHHHhccCcccCcCHHHHhcChhhcccccchh
Confidence 9999998888776333222 2222222 2335578899999999999999999999999999999875544
No 12
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=6.2e-53 Score=364.39 Aligned_cols=279 Identities=32% Similarity=0.475 Sum_probs=237.8
Q ss_pred chhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcC
Q 035861 9 SVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDD 88 (332)
Q Consensus 9 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 88 (332)
.+++|+.+..||+|+||.||+|+.+.||..+|+|+++++..... +.....+.|-.+|....++.|++++..| ++
T Consensus 139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~-----~Qv~hV~aERdiL~~~ds~~vVKLyYsF-QD 212 (550)
T KOG0605|consen 139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKK-----NQVEHVRAERDILAEVDSPWVVKLYYSF-QD 212 (550)
T ss_pred CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhh-----hhHHHHHHHHHHhhhcCCCcEEEEEEEe-cC
Confidence 57899999999999999999999999999999999987654332 2233567899999999999999999999 66
Q ss_pred CCeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccC
Q 035861 89 HDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYG 168 (332)
Q Consensus 89 ~~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~ 168 (332)
..++||||||++|+-.--+..+.+.+++..+..++.+++.|+..||+.|++|+||||+|+|||..|++||+|||+|.-..
T Consensus 213 ~~~LYLiMEylPGGD~mTLL~~~~~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~ 292 (550)
T KOG0605|consen 213 KEYLYLIMEYLPGGDMMTLLMRKDTLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLD 292 (550)
T ss_pred CCeeEEEEEecCCccHHHHHHhcCcCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheeecCCCCEeeccccccchhh
Confidence 69999999999986555555568999999999999999999999999999999999999999999999999999975221
Q ss_pred C-----------------------CCC-----C-------------------CccccccccccchhhhcCCCCCCchhHH
Q 035861 169 S-----------------------PLK-----P-------------------YTSLVVTLWYRAPELLLGAKKYSTAVDM 201 (332)
Q Consensus 169 ~-----------------------~~~-----~-------------------~~~~~~~~~y~aPE~~~~~~~~~~~sDi 201 (332)
. ... . ...-.|||.|+|||++.+ ..|+...|.
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~-kgY~~~cDw 371 (550)
T KOG0605|consen 293 KKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLG-KGYGKECDW 371 (550)
T ss_pred hhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhc-CCCCccccH
Confidence 0 000 0 012368999999999998 669999999
Q ss_pred HHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCch
Q 035861 202 WSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSES 281 (332)
Q Consensus 202 ~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (332)
|||||++||||.|.+||.+.+..+++.++.+..... .++....++++
T Consensus 372 WSLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l---------------------------------~fP~~~~~s~e 418 (550)
T KOG0605|consen 372 WSLGCIMYEMLVGYPPFCSETPQETYRKIVNWRETL---------------------------------KFPEEVDLSDE 418 (550)
T ss_pred HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhc---------------------------------cCCCcCcccHH
Confidence 999999999999999999999999999998752111 11112237899
Q ss_pred HHHHHHHhcCCCCCCCC---CHHHHhcCCCCCCCCCCCCCCCCCCCCCcc
Q 035861 282 GFDLLNRLLTYDPEKRI---TVDDALNHYWFHEVPLPKSKDFMPTFPPQH 328 (332)
Q Consensus 282 ~~~li~~~l~~dp~~Rp---s~~ell~hp~f~~~~~~~~~~~~~~~~~~~ 328 (332)
++|||.+||. ||+.|. +++||-+||||+.+.|..+++-.++|.|+.
T Consensus 419 A~DLI~rll~-d~~~RLG~~G~~EIK~HPfF~~v~W~~l~~~~apfvP~v 467 (550)
T KOG0605|consen 419 AKDLITRLLC-DPENRLGSKGAEEIKKHPFFKGVDWDHLREMPAPFVPQV 467 (550)
T ss_pred HHHHHHHHhc-CHHHhcCcccHHHHhcCCccccCCcchhhcCCCCCCCCC
Confidence 9999999999 999998 499999999999999999999999999975
No 13
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-53 Score=366.24 Aligned_cols=268 Identities=30% Similarity=0.453 Sum_probs=233.4
Q ss_pred ccchhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhC-CCCCeeeeeeeE
Q 035861 7 CRSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSF-DHPSIVNVKEVV 85 (332)
Q Consensus 7 ~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~ 85 (332)
-+..++|.+++.||.|+|++|++|+...+++.||||++.++-..++.- ...+..|-..|.+| .||.|++++..|
T Consensus 69 kk~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~K-----vkYV~~Ek~~l~~L~~hPgivkLy~TF 143 (604)
T KOG0592|consen 69 KKTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKK-----VKYVTREKEALTQLSGHPGIVKLYFTF 143 (604)
T ss_pred cCChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcc-----cchhhHHHHHHHHhhCCCCeEEEEEEe
Confidence 356789999999999999999999999999999999997654433222 22456788999999 899999999999
Q ss_pred EcCCCeEEEEccccc-ccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccc
Q 035861 86 MDDHDSVYMVMEYME-HDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMS 164 (332)
Q Consensus 86 ~~~~~~~~lv~e~~~-~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~ 164 (332)
.++..+|+|+||++ |++++.+.+ -+.|++..++.++.+|+.||+|||++|||||||||+|||++++++++|+|||.+
T Consensus 144 -QD~~sLYFvLe~A~nGdll~~i~K-~Gsfde~caR~YAAeIldAleylH~~GIIHRDlKPENILLd~dmhikITDFGsA 221 (604)
T KOG0592|consen 144 -QDEESLYFVLEYAPNGDLLDLIKK-YGSFDETCARFYAAEILDALEYLHSNGIIHRDLKPENILLDKDGHIKITDFGSA 221 (604)
T ss_pred -ecccceEEEEEecCCCcHHHHHHH-hCcchHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeEcCCCcEEEeecccc
Confidence 55588999999998 567777766 689999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCC-----------CC--CccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Q 035861 165 RQYGSPL-----------KP--YTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIF 231 (332)
Q Consensus 165 ~~~~~~~-----------~~--~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~ 231 (332)
....... .. .....||..|.+||++.. ...++.+|+|+|||++|+|+.|.+||.+.+...++++|+
T Consensus 222 K~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~-~~~~~~sDiWAlGCilyQmlaG~PPFra~NeyliFqkI~ 300 (604)
T KOG0592|consen 222 KILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLND-SPAGPSSDLWALGCILYQMLAGQPPFRAANEYLIFQKIQ 300 (604)
T ss_pred ccCChhhccccCccCcccccCcccceeeeecccCHHHhcC-CCCCcccchHHHHHHHHHHhcCCCCCccccHHHHHHHHH
Confidence 8663211 11 145789999999999988 789999999999999999999999999999999999998
Q ss_pred HHcCCCCCCcccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCC
Q 035861 232 KTLGTPTETIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHE 311 (332)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~ 311 (332)
...-..+ +..++.+++||+++|..||.+|+++++|-+||||..
T Consensus 301 ~l~y~fp-------------------------------------~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~HpFF~~ 343 (604)
T KOG0592|consen 301 ALDYEFP-------------------------------------EGFPEDARDLIKKLLVRDPSDRLTSQQIKAHPFFEG 343 (604)
T ss_pred HhcccCC-------------------------------------CCCCHHHHHHHHHHHccCccccccHHHHhhCccccc
Confidence 8643333 336899999999999999999999999999999999
Q ss_pred CCCCCCCC
Q 035861 312 VPLPKSKD 319 (332)
Q Consensus 312 ~~~~~~~~ 319 (332)
+.|.....
T Consensus 344 Vdw~nlw~ 351 (604)
T KOG0592|consen 344 VDWENLWQ 351 (604)
T ss_pred CChhhhhh
Confidence 99888644
No 14
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=4.6e-51 Score=352.27 Aligned_cols=286 Identities=38% Similarity=0.755 Sum_probs=233.6
Q ss_pred chhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcC
Q 035861 9 SVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDD 88 (332)
Q Consensus 9 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 88 (332)
.+.+|++.+.||.|+||+||+|.+..++..||+|++........ ...+.+|+.++++++||||+++++++. .
T Consensus 3 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~-------~~~~~~E~~~l~~l~h~niv~~~~~~~-~ 74 (288)
T cd07871 3 KLETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGA-------PCTAIREVSLLKNLKHANIVTLHDIIH-T 74 (288)
T ss_pred ccccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCc-------chhHHHHHHHHHhCCCCCEeeEEEEEc-C
Confidence 46789999999999999999999999999999999865432111 124568999999999999999999984 4
Q ss_pred CCeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccC
Q 035861 89 HDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYG 168 (332)
Q Consensus 89 ~~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~ 168 (332)
....++|||+++|++.+.+......+++..+..++.||+.||+|||++||+|+||||+||+++.++.+||+|||.+....
T Consensus 75 ~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~ 154 (288)
T cd07871 75 ERCLTLVFEYLDSDLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLINEKGELKLADFGLARAKS 154 (288)
T ss_pred CCeEEEEEeCCCcCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEECcCcceeecc
Confidence 47899999999998888777766678999999999999999999999999999999999999999999999999987654
Q ss_pred CCCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCC
Q 035861 169 SPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSEL 248 (332)
Q Consensus 169 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (332)
..........++..|+|||.+.+...++.++|+||||+++|+|++|..||...+..+....+....+.++...++.+...
T Consensus 155 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (288)
T cd07871 155 VPTKTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSN 234 (288)
T ss_pred CCCccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccc
Confidence 43333445577899999999877567899999999999999999999999999888888888888888887777665432
Q ss_pred ccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCC
Q 035861 249 PGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWF 309 (332)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f 309 (332)
......... ...........+.++.++++||++||++||.+|||++|+|+||||
T Consensus 235 ~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~hp~f 288 (288)
T cd07871 235 EEFRSYLFP-------QYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRHSYF 288 (288)
T ss_pred hhhhccccC-------ccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcCCCC
Confidence 211110000 000011111234478899999999999999999999999999998
No 15
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-51 Score=359.94 Aligned_cols=262 Identities=31% Similarity=0.449 Sum_probs=226.1
Q ss_pred cchhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCC-CCCeeeeeeeEE
Q 035861 8 RSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFD-HPSIVNVKEVVM 86 (332)
Q Consensus 8 ~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~ 86 (332)
.....|.+.+.||+|+||+|+.|.+..+++.||+|++......... ......+.+|+.++++++ ||||+++++++.
T Consensus 14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~---~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~ 90 (370)
T KOG0583|consen 14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKS---QKLDELIKREISILRRLRSHPNIIRLLEVFA 90 (370)
T ss_pred cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccc---cccchhhHHHHHHHHHhccCCCEeEEEEEEe
Confidence 4667999999999999999999999999999999977654222111 112234558999999998 999999999995
Q ss_pred cCCCeEEEEcccccc-cHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCC-CcEEEeecccc
Q 035861 87 DDHDSVYMVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQ-GVLKICDFGMS 164 (332)
Q Consensus 87 ~~~~~~~lv~e~~~~-~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~-~~~~l~df~~~ 164 (332)
.. ..+++||||+.| ++++.+.. .++++|..+..++.||+.|++|||++||+||||||+||+++.+ +++||+|||++
T Consensus 91 t~-~~~~ivmEy~~gGdL~~~i~~-~g~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld~~~~~~Kl~DFG~s 168 (370)
T KOG0583|consen 91 TP-TKIYIVMEYCSGGDLFDYIVN-KGRLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILLDGNEGNLKLSDFGLS 168 (370)
T ss_pred cC-CeEEEEEEecCCccHHHHHHH-cCCCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEecCCCCCEEEeccccc
Confidence 54 669999999996 77777777 8999999999999999999999999999999999999999999 99999999999
Q ss_pred cccCCCCCCCccccccccccchhhhcCCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCccc
Q 035861 165 RQYGSPLKPYTSLVVTLWYRAPELLLGAK-KYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWP 243 (332)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (332)
.............+|++.|+|||++.+.. +...++|+||+|++||.|++|..||...+...+...+.+.....+
T Consensus 169 ~~~~~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~ki~~~~~~~p----- 243 (370)
T KOG0583|consen 169 AISPGEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRKIRKGEFKIP----- 243 (370)
T ss_pred cccCCCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHHHhcCCccCC-----
Confidence 88744456678889999999999999866 557899999999999999999999999888888887655432222
Q ss_pred CCCCCccccccccCCchhhhhhhCCCCccCCCCCC-CchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCC
Q 035861 244 GLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVL-SESGFDLLNRLLTYDPEKRITVDDALNHYWFHE 311 (332)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~ 311 (332)
..+ |+++++|+++||..||.+|+++.+|++||||+.
T Consensus 244 --------------------------------~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~~h~w~~~ 280 (370)
T KOG0583|consen 244 --------------------------------SYLLSPEARSLIEKMLVPDPSTRITLLEILEHPWFQK 280 (370)
T ss_pred --------------------------------CCcCCHHHHHHHHHHcCCCcccCCCHHHHhhChhhcc
Confidence 225 899999999999999999999999999999997
No 16
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=1.4e-50 Score=351.88 Aligned_cols=290 Identities=37% Similarity=0.740 Sum_probs=227.0
Q ss_pred hhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCC
Q 035861 10 VFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDH 89 (332)
Q Consensus 10 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 89 (332)
.++|++.+.||.|+||+||+|++..+++.||+|++........ ...+.+|+.+++.++||||+.+++++.. .
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~-------~~~~~~E~~~l~~l~h~niv~~~~~~~~-~ 75 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGT-------PFTAIREASLLKGLKHANIVLLHDIIHT-K 75 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEecccccccc-------chhHHHHHHHHhhCCCCCcCeEEEEEec-C
Confidence 4689999999999999999999999999999999875432111 1145689999999999999999999854 4
Q ss_pred CeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCC
Q 035861 90 DSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGS 169 (332)
Q Consensus 90 ~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~ 169 (332)
...++||||+++++.+.+....+.+++..+..++.|++.||+|||+.||+|+||||+||+++.++.++|+|||.+.....
T Consensus 76 ~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 155 (303)
T cd07869 76 ETLTLVFEYVHTDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISDTGELKLADFGLARAKSV 155 (303)
T ss_pred CeEEEEEECCCcCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECCCCcceeccC
Confidence 78999999999999888887677899999999999999999999999999999999999999999999999999876544
Q ss_pred CCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCh-HHHHHHHHHHcCCCCCCcccCCCCC
Q 035861 170 PLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTE-VDQIDKIFKTLGTPTETIWPGLSEL 248 (332)
Q Consensus 170 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (332)
.........++..|+|||++.+...++.++|+||||+++|+|++|..||....+ .+....+....+.+....++.....
T Consensus 156 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (303)
T cd07869 156 PSHTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSL 235 (303)
T ss_pred CCccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhc
Confidence 333445567889999999987656789999999999999999999999987543 3445555555555555544443322
Q ss_pred cccccc-ccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCC
Q 035861 249 PGAKAN-FAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVP 313 (332)
Q Consensus 249 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~ 313 (332)
+..... ............+. ...++..+.+|+.+||+.||++|||++|+|+||||++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h~~f~~~~ 295 (303)
T cd07869 236 PHFKPERFTLYSPKNLRQAWN------KLSYVNHAEDLASKLLQCFPKNRLSAQAALSHEYFSDLP 295 (303)
T ss_pred cccccccccccCCccHHHHhh------ccCCChHHHHHHHHHhccCchhccCHHHHhcCcccccCC
Confidence 211100 00000000011111 112567889999999999999999999999999999875
No 17
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=5.1e-53 Score=337.67 Aligned_cols=261 Identities=28% Similarity=0.441 Sum_probs=219.1
Q ss_pred cccchhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeee-e
Q 035861 6 GCRSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKE-V 84 (332)
Q Consensus 6 ~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~-~ 84 (332)
|-..+.+|+++++||+|+||.||++++..+|..+|.|.+.-....... ......|+.+|++|+||||+.+++ .
T Consensus 14 ~~~~l~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~------rq~~v~Ei~lLkQL~HpNIVqYy~~~ 87 (375)
T KOG0591|consen 14 PQKTLADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKA------RQDCVKEISLLKQLNHPNIVQYYAHS 87 (375)
T ss_pred CcccHHHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHH------HHHHHHHHHHHHhcCCchHHHHHHHh
Confidence 456778999999999999999999999999999999998733222211 225679999999999999999999 5
Q ss_pred EEcCCCeEEEEcccccccHHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHHH--CC--cccccCCCCCEEEcCCCcE
Q 035861 85 VMDDHDSVYMVMEYMEHDLKWLMES----MKQPFSTSEVKCLMLQLLEGVKYLHD--NW--VLHRDLKTSNLLLNNQGVL 156 (332)
Q Consensus 85 ~~~~~~~~~lv~e~~~~~l~~~~~~----~~~~l~~~~~~~i~~~l~~~L~~lh~--~~--i~H~di~p~Nili~~~~~~ 156 (332)
+.++...++||||+|+++-+..++. ..+.++|..+|+++.|+|.||.++|. .. +.||||||.|||++.+|.|
T Consensus 88 f~~~~evlnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvv 167 (375)
T KOG0591|consen 88 FIEDNEVLNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVV 167 (375)
T ss_pred hhccchhhHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCce
Confidence 5556566999999999654444433 24569999999999999999999998 44 8899999999999999999
Q ss_pred EEeecccccccCCCCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCC
Q 035861 157 KICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGT 236 (332)
Q Consensus 157 ~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~ 236 (332)
||+|||+++...+...-.....|||.||+||.+.+ ..|+.+||||||||++|||+....||.+.+-.+...+|.++..+
T Consensus 168 KLGDfGL~r~l~s~~tfA~S~VGTPyYMSPE~i~~-~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L~~KI~qgd~~ 246 (375)
T KOG0591|consen 168 KLGDFGLGRFLSSKTTFAHSLVGTPYYMSPERIHE-SGYNFKSDIWSLGCLLYEMCALQSPFYGDNLLSLCKKIEQGDYP 246 (375)
T ss_pred eeccchhHhHhcchhHHHHhhcCCCcccCHHHHhc-CCCCcchhHHHHHHHHHHHHhcCCCcccccHHHHHHHHHcCCCC
Confidence 99999999998776666677899999999999998 78999999999999999999999999999988888888776333
Q ss_pred CCCCcccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCC
Q 035861 237 PTETIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVP 313 (332)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~ 313 (332)
+.. ...+|..+..||.-|+.+||+.||+. +|++.++.
T Consensus 247 ~~p-----------------------------------~~~YS~~l~~li~~ci~vd~~~RP~t-----~~~v~di~ 283 (375)
T KOG0591|consen 247 PLP-----------------------------------DEHYSTDLRELINMCIAVDPEQRPDT-----VPYVQDIQ 283 (375)
T ss_pred CCc-----------------------------------HHHhhhHHHHHHHHHccCCcccCCCc-----chHHHHHH
Confidence 222 12389999999999999999999985 44444444
No 18
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=5.1e-51 Score=341.93 Aligned_cols=266 Identities=32% Similarity=0.483 Sum_probs=224.8
Q ss_pred cccchhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeE
Q 035861 6 GCRSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVV 85 (332)
Q Consensus 6 ~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~ 85 (332)
+.....+|.+.+.||+|+|++||+|+++.++..||||.+.+........ ..+..|+++|+.++||||+.+++++
T Consensus 5 ~~~~~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~------e~L~~Ei~iLkel~H~nIV~l~d~~ 78 (429)
T KOG0595|consen 5 SMRVVGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLV------ELLLSEIKILKELKHPNIVRLLDCI 78 (429)
T ss_pred cccccccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHH------HHHHHHHHHHHhcCCcceeeEEEEE
Confidence 4456789999999999999999999999999999999998765322211 1346899999999999999999998
Q ss_pred EcCCCeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCC------CcEEEe
Q 035861 86 MDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQ------GVLKIC 159 (332)
Q Consensus 86 ~~~~~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~------~~~~l~ 159 (332)
+.+++.|+|||||.|+-+.......+.+++..++.++.||+.||++||+++|+||||||.|||++.. -.+||+
T Consensus 79 -~~~~~i~lVMEyC~gGDLs~yi~~~~~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIA 157 (429)
T KOG0595|consen 79 -EDDDFIYLVMEYCNGGDLSDYIRRRGRLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDTSPVLKIA 157 (429)
T ss_pred -ecCCeEEEEEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCCCceEEec
Confidence 5558999999999976555555557899999999999999999999999999999999999999875 469999
Q ss_pred ecccccccCCCCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCC
Q 035861 160 DFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTE 239 (332)
Q Consensus 160 df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~ 239 (332)
|||+++.... .....+.+|++.|||||++.. .+|+-++|+||+|+++|++++|+.||...+..+....+.+.....+.
T Consensus 158 DFGfAR~L~~-~~~a~tlcGSplYMAPEV~~~-~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~~~~k~~~~~~~ 235 (429)
T KOG0595|consen 158 DFGFARFLQP-GSMAETLCGSPLYMAPEVIMS-QQYDAKADLWSIGTILYQCLTGKPPFDAETPKELLLYIKKGNEIVPV 235 (429)
T ss_pred ccchhhhCCc-hhHHHHhhCCccccCHHHHHh-ccccchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhccccccCc
Confidence 9999998853 345567899999999999987 78999999999999999999999999999988887766544222111
Q ss_pred CcccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCCC
Q 035861 240 TIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVPL 314 (332)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~ 314 (332)
.+..++....+|+...++.+|.+|.+.++-+.|++...-+.
T Consensus 236 ----------------------------------~~~~~s~~~~~Ll~~ll~~~~~~~~~~~~~~~~~~l~~~p~ 276 (429)
T KOG0595|consen 236 ----------------------------------LPAELSNPLRELLISLLQRNPKDRISFEDFFDHPFLAANPQ 276 (429)
T ss_pred ----------------------------------hhhhccCchhhhhhHHHhcCccccCchHHhhhhhhcccCcc
Confidence 12226777779999999999999999999999999887653
No 19
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-51 Score=365.27 Aligned_cols=279 Identities=28% Similarity=0.433 Sum_probs=244.0
Q ss_pred ccchhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhC-CCCCeeeeeeeE
Q 035861 7 CRSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSF-DHPSIVNVKEVV 85 (332)
Q Consensus 7 ~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~ 85 (332)
...+++|.+++.||+|+||+|+++..+.+++.+|||++++...-.....+ ..+.|.+++... +||.++.++..+
T Consensus 364 ~~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve-----~~~~EkrI~~la~~HPFL~~L~~~f 438 (694)
T KOG0694|consen 364 PLTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVE-----SLMCEKRIFELANRHPFLVNLFSCF 438 (694)
T ss_pred cccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHH-----HHHHHHHHHHHhccCCeEeeccccc
Confidence 34678999999999999999999999999999999999987655444443 567888888777 599999999999
Q ss_pred EcCCCeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeeccccc
Q 035861 86 MDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSR 165 (332)
Q Consensus 86 ~~~~~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~ 165 (332)
+...++|+||||+.|+.... ....+.+++..+..++..++.||.|||++||++||||.+|||+|.+|.+||+|||+|+
T Consensus 439 -QT~~~l~fvmey~~Ggdm~~-~~~~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLLD~eGh~kiADFGlcK 516 (694)
T KOG0694|consen 439 -QTKEHLFFVMEYVAGGDLMH-HIHTDVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLLDTEGHVKIADFGLCK 516 (694)
T ss_pred -ccCCeEEEEEEecCCCcEEE-EEecccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEEcccCcEEeccccccc
Confidence 55589999999999877332 2335789999999999999999999999999999999999999999999999999998
Q ss_pred ccCCCCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCC
Q 035861 166 QYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGL 245 (332)
Q Consensus 166 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (332)
..-.....-.+.+||+.|+|||++.+ ..|+.+.|.|||||+||||+.|..||.+.+..+..+.|.......|..
T Consensus 517 e~m~~g~~TsTfCGTpey~aPEil~e-~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~~d~~~yP~~----- 590 (694)
T KOG0694|consen 517 EGMGQGDRTSTFCGTPEFLAPEVLTE-QSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIVNDEVRYPRF----- 590 (694)
T ss_pred ccCCCCCccccccCChhhcChhhhcc-CcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCCCCCCc-----
Confidence 76444455678899999999999998 789999999999999999999999999999999999998754333222
Q ss_pred CCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCC-----HHHHhcCCCCCCCCCCCC--C
Q 035861 246 SELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRIT-----VDDALNHYWFHEVPLPKS--K 318 (332)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps-----~~ell~hp~f~~~~~~~~--~ 318 (332)
+|.++.++++++|..+|++|.. +++|.+||||..|+|.+. +
T Consensus 591 --------------------------------ls~ea~~il~~ll~k~p~kRLG~~e~d~~~i~~hpFFr~i~w~~L~~r 638 (694)
T KOG0694|consen 591 --------------------------------LSKEAIAIMRRLLRKNPEKRLGSGERDAEDIKKHPFFRSIDWDDLLNR 638 (694)
T ss_pred --------------------------------ccHHHHHHHHHHhccCcccccCCCCCCchhhhhCCccccCCHHHHhhc
Confidence 7999999999999999999994 689999999999999988 5
Q ss_pred CCCCCCCCcccc
Q 035861 319 DFMPTFPPQHAR 330 (332)
Q Consensus 319 ~~~~~~~~~~~~ 330 (332)
...|+|.|....
T Consensus 639 ~i~PPf~P~i~~ 650 (694)
T KOG0694|consen 639 RIKPPFVPTIKG 650 (694)
T ss_pred cCCCCCCcccCC
Confidence 688999998653
No 20
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-51 Score=359.15 Aligned_cols=259 Identities=28% Similarity=0.472 Sum_probs=228.9
Q ss_pred hhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCC
Q 035861 10 VFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDH 89 (332)
Q Consensus 10 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 89 (332)
...|....+||+|+.|.||.+....+++.||||.+......... -+++|+.+|+.+.|+||+.+++.+...
T Consensus 272 ~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~ke--------LilnEi~Vm~~~~H~NiVnfl~Sylv~- 342 (550)
T KOG0578|consen 272 RSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKE--------LLLNEILVMRDLHHPNIVNFLDSYLVG- 342 (550)
T ss_pred hhhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchh--------hhHHHHHHHHhccchHHHHHHHHhccc-
Confidence 34789999999999999999999999999999999887655533 467999999999999999999999766
Q ss_pred CeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCC
Q 035861 90 DSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGS 169 (332)
Q Consensus 90 ~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~ 169 (332)
..+|+||||++|+.+..+.. ...++|.+++.|++++++||+|||.+||+|+|||.+|||++.+|.+||+|||+|.....
T Consensus 343 deLWVVMEym~ggsLTDvVt-~~~~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~ 421 (550)
T KOG0578|consen 343 DELWVVMEYMEGGSLTDVVT-KTRMTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISE 421 (550)
T ss_pred ceeEEEEeecCCCchhhhhh-cccccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEeccCCcEEEeeeeeeecccc
Confidence 77999999999876666665 44599999999999999999999999999999999999999999999999999999887
Q ss_pred CCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCCc
Q 035861 170 PLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELP 249 (332)
Q Consensus 170 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (332)
....+.+..||++|||||++.. ..|+++.||||||+++.||+-|.+||-..+....+..+...-.+..
T Consensus 422 ~~~KR~TmVGTPYWMAPEVvtr-k~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLIa~ng~P~l----------- 489 (550)
T KOG0578|consen 422 EQSKRSTMVGTPYWMAPEVVTR-KPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPKL----------- 489 (550)
T ss_pred ccCccccccCCCCccchhhhhh-cccCccccchhhhhHHHHHhcCCCCccCCChHHHHHHHhhcCCCCc-----------
Confidence 7778889999999999999987 7899999999999999999999999998888777776655322221
Q ss_pred cccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCC
Q 035861 250 GAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVP 313 (332)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~ 313 (332)
..+..+|+.+++|+.+||..|+++|+++.|||+||||+...
T Consensus 490 -----------------------k~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~HpFl~~a~ 530 (550)
T KOG0578|consen 490 -----------------------KNPEKLSPELKDFLDRCLVVDVEQRASAKELLEHPFLKMAK 530 (550)
T ss_pred -----------------------CCccccCHHHHHHHHHHhhcchhcCCCHHHHhcChhhhhcC
Confidence 12334899999999999999999999999999999997654
No 21
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.2e-51 Score=338.05 Aligned_cols=296 Identities=37% Similarity=0.642 Sum_probs=242.1
Q ss_pred hhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEc--
Q 035861 10 VFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMD-- 87 (332)
Q Consensus 10 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-- 87 (332)
...|..++.||.|++|.|..+.++.+|+.||||++...-.....+ ++.++|+.+|+.++|+||+.+.+++..
T Consensus 21 ~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~a------kRtlRElklLr~~~HeNIi~l~di~~p~~ 94 (359)
T KOG0660|consen 21 PRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDA------KRTLRELKLLRHLRHENIIGLLDIFRPPS 94 (359)
T ss_pred cceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHH------HHHHHHHHHHHHhcCCCcceEEeeccccc
Confidence 346666899999999999999999999999999997322222111 246799999999999999999999855
Q ss_pred --CCCeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeeccccc
Q 035861 88 --DHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSR 165 (332)
Q Consensus 88 --~~~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~ 165 (332)
+-...|+|+|.++.++...+.. +..+++..+..+++||+.||.|+|+.|++|||+||.|++++.+..+|++|||+|+
T Consensus 95 ~~~f~DvYiV~elMetDL~~iik~-~~~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n~~c~lKI~DFGLAR 173 (359)
T KOG0660|consen 95 RDKFNDVYLVFELMETDLHQIIKS-QQDLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNADCDLKICDFGLAR 173 (359)
T ss_pred ccccceeEEehhHHhhHHHHHHHc-CccccHHHHHHHHHHHHHhcchhhcccccccccchhheeeccCCCEEecccccee
Confidence 2356899999997776665554 6679999999999999999999999999999999999999999999999999999
Q ss_pred ccCCC--CCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCccc
Q 035861 166 QYGSP--LKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWP 243 (332)
Q Consensus 166 ~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (332)
..+.. ....+....|.+|+|||.+.....|+.+.||||+||++.||++|+..|.+.+....+..+....+.|.+....
T Consensus 174 ~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~ 253 (359)
T KOG0660|consen 174 YLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQ 253 (359)
T ss_pred eccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHH
Confidence 87532 2333566779999999999888899999999999999999999999999999999999999999998877655
Q ss_pred CCCCCcc--ccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCCCCCCCCC
Q 035861 244 GLSELPG--AKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVPLPKSKDF 320 (332)
Q Consensus 244 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~~~~~~ 320 (332)
.+..-.+ ......+.+....... -+..++.+.+|+.+||..||.+|+|++|+|+||||..+.-++.+..
T Consensus 254 ~i~s~~ar~yi~slp~~p~~~f~~~--------fp~a~p~AidLlekmL~fdP~kRita~eAL~hPYl~~~hdp~dEP~ 324 (359)
T KOG0660|consen 254 KIRSEKARPYIKSLPQIPKQPFSSI--------FPNANPLAIDLLEKMLVFDPKKRITAEEALAHPYLAPYHDPEDEPV 324 (359)
T ss_pred HhccHHHHHHHHhCCCCCCCCHHHH--------cCCCCHHHHHHHHHHhccCccccCCHHHHhcChhhhhhcCCccCCC
Confidence 4442111 1111112222222222 2347899999999999999999999999999999999998877763
No 22
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4.3e-51 Score=360.26 Aligned_cols=265 Identities=28% Similarity=0.425 Sum_probs=233.6
Q ss_pred chhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcC
Q 035861 9 SVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDD 88 (332)
Q Consensus 9 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 88 (332)
.+.-|++++.||.|+.|.|-+|++..||+.+|||++.+.....+. ....+.+|+-+|+.+.|||++.+++++ ++
T Consensus 10 tiGpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s-----~~~~IerEIviMkLi~HpnVl~LydVw-e~ 83 (786)
T KOG0588|consen 10 TIGPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSS-----QPAGIEREIVIMKLIEHPNVLRLYDVW-EN 83 (786)
T ss_pred cccceeccccccCCCCceehhhhcccccceeEEEeeccccccccc-----cccchhhhhHHHHHhcCCCeeeeeeee-cc
Confidence 455789999999999999999999999999999999876422222 223677999999999999999999999 66
Q ss_pred CCeEEEEccccccc-HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeeccccccc
Q 035861 89 HDSVYMVMEYMEHD-LKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQY 167 (332)
Q Consensus 89 ~~~~~lv~e~~~~~-l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~ 167 (332)
...+|+|.||++|+ +.+.+. ..+++++.+++++++||+.|+.|||..+|+|+|+||+|+|++..+++||+|||.|...
T Consensus 84 ~~~lylvlEyv~gGELFdylv-~kG~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLLd~~~nIKIADFGMAsLe 162 (786)
T KOG0588|consen 84 KQHLYLVLEYVPGGELFDYLV-RKGPLPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLLDVKNNIKIADFGMASLE 162 (786)
T ss_pred CceEEEEEEecCCchhHHHHH-hhCCCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhhhcccCEeeeccceeecc
Confidence 68999999999965 555555 4899999999999999999999999999999999999999999999999999999875
Q ss_pred CCCCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCC
Q 035861 168 GSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSE 247 (332)
Q Consensus 168 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (332)
. +..-..+.||++.|++||++++..+.+.++||||.|++||.++||..||++.+-...+.++.++....|.
T Consensus 163 ~-~gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~LLlKV~~G~f~MPs-------- 233 (786)
T KOG0588|consen 163 V-PGKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIRVLLLKVQRGVFEMPS-------- 233 (786)
T ss_pred c-CCccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHHHHHHHHHcCcccCCC--------
Confidence 3 3455667899999999999999888899999999999999999999999999999999988876544433
Q ss_pred CccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCCCCCCC
Q 035861 248 LPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVPLPKSK 318 (332)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~~~~ 318 (332)
.+++++++||++||.+||+.|.+.+||++|||+......+..
T Consensus 234 -----------------------------~Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP~l~g~~~~~~~ 275 (786)
T KOG0588|consen 234 -----------------------------NISSEAQDLLRRMLDVDPSTRITTEEILKHPFLSGYTSLPSS 275 (786)
T ss_pred -----------------------------cCCHHHHHHHHHHhccCccccccHHHHhhCchhhcCCCCChh
Confidence 389999999999999999999999999999999998766655
No 23
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=5.2e-51 Score=353.73 Aligned_cols=257 Identities=32% Similarity=0.555 Sum_probs=228.7
Q ss_pred hhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCC
Q 035861 10 VFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDH 89 (332)
Q Consensus 10 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 89 (332)
+++|.+.+.||+|+||.||+|+.+.+.+.||+|.+.+........ ..+.+|+++++.++||||+.+++.| +..
T Consensus 1 me~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l------~~l~~ev~i~r~lkHpniv~m~esf-Et~ 73 (808)
T KOG0597|consen 1 MEQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKEL------KNLRQEVRILRSLKHPNIVEMLESF-ETS 73 (808)
T ss_pred CcchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHH------HHHHHHHHHHHhcCCcchhhHHHhh-ccc
Confidence 468999999999999999999999999999999998765544222 1467999999999999999999999 666
Q ss_pred CeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCC
Q 035861 90 DSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGS 169 (332)
Q Consensus 90 ~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~ 169 (332)
...|+|+||+.|++...+. .++.++|+.+..++.++..||.|||+++|.|+|+||.||++...|.+|++|||+++..+.
T Consensus 74 ~~~~vVte~a~g~L~~il~-~d~~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~ 152 (808)
T KOG0597|consen 74 AHLWVVTEYAVGDLFTILE-QDGKLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILLEKGGTLKLCDFGLARAMST 152 (808)
T ss_pred ceEEEEehhhhhhHHHHHH-hccCCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeeecCCCceeechhhhhhhccc
Confidence 8899999999997666555 489999999999999999999999999999999999999999999999999999999887
Q ss_pred CCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCCc
Q 035861 170 PLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELP 249 (332)
Q Consensus 170 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (332)
+........||+.|||||.+.+ ..++..+|+|||||++||+++|++||....-.+..+.|......++.
T Consensus 153 ~t~vltsikGtPlYmAPElv~e-~pyd~~sDlWslGcilYE~~~G~PPF~a~si~~Lv~~I~~d~v~~p~---------- 221 (808)
T KOG0597|consen 153 NTSVLTSIKGTPLYMAPELVEE-QPYDHTSDLWSLGCILYELYVGQPPFYARSITQLVKSILKDPVKPPS---------- 221 (808)
T ss_pred CceeeeeccCcccccCHHHHcC-CCccchhhHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhcCCCCCcc----------
Confidence 7777778899999999999986 89999999999999999999999999988877777777654332222
Q ss_pred cccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCC
Q 035861 250 GAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEV 312 (332)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~ 312 (332)
..+..+.+|++.+|.+||..|.+..+++.|||++..
T Consensus 222 ---------------------------~~S~~f~nfl~gLL~kdP~~RltW~~Ll~HpF~k~~ 257 (808)
T KOG0597|consen 222 ---------------------------TASSSFVNFLQGLLIKDPAQRLTWTDLLGHPFWKGK 257 (808)
T ss_pred ---------------------------cccHHHHHHHHHHhhcChhhcccHHHHhcChHHhhh
Confidence 279999999999999999999999999999999864
No 24
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1e-50 Score=336.33 Aligned_cols=285 Identities=37% Similarity=0.647 Sum_probs=237.2
Q ss_pred hhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCC
Q 035861 10 VFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDH 89 (332)
Q Consensus 10 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 89 (332)
.-.|...+.+|.|+||.||+|+...+++.||||.+-.+..... +|+.+|+.+.||||+.+..++....
T Consensus 23 ~i~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~kn------------rEl~im~~l~HpNIV~L~~~f~~~~ 90 (364)
T KOG0658|consen 23 EISYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRYKN------------RELQIMRKLDHPNIVRLLYFFSSST 90 (364)
T ss_pred EEEEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCcCc------------HHHHHHHhcCCcCeeeEEEEEEecC
Confidence 3478999999999999999999999999999999876554332 7999999999999999998885432
Q ss_pred ----CeEEEEcccccccHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCC-CcEEEeec
Q 035861 90 ----DSVYMVMEYMEHDLKWLMES---MKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQ-GVLKICDF 161 (332)
Q Consensus 90 ----~~~~lv~e~~~~~l~~~~~~---~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~-~~~~l~df 161 (332)
-+..+||||++-++...+.. .+..++.-.++-+.+||+.||+|||+.||+||||||.|+|||.+ |.+||+||
T Consensus 91 ~~d~~~lnlVleymP~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD~~tg~LKicDF 170 (364)
T KOG0658|consen 91 ESDEVYLNLVLEYMPETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVDPDTGVLKICDF 170 (364)
T ss_pred CCchhHHHHHHHhchHHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEcCCCCeEEeccC
Confidence 24668999999998877764 36789999999999999999999999999999999999999987 89999999
Q ss_pred ccccccCCCCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCc
Q 035861 162 GMSRQYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETI 241 (332)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 241 (332)
|+|+....+ .+......+..|+|||.+.+...|+.+.||||.||++.||+.|.+.|.+.+..+.+..+++..+.|..+.
T Consensus 171 GSAK~L~~~-epniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~ 249 (364)
T KOG0658|consen 171 GSAKVLVKG-EPNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTRED 249 (364)
T ss_pred CcceeeccC-CCceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHH
Confidence 999988544 3445667788999999999999999999999999999999999999999999999999999999998775
Q ss_pred ccCCCCC--ccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCCCCCC
Q 035861 242 WPGLSEL--PGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVPLPKS 317 (332)
Q Consensus 242 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~~~ 317 (332)
...+..- .............. -....+++++.+|+.++|+.+|.+|.++.|++.||||..+..++.
T Consensus 250 I~~mn~~y~~~~~p~ik~~~~~~----------~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~fFdelr~~~~ 317 (364)
T KOG0658|consen 250 IKSMNPNYTEFKFPQIKAHPWHK----------VFFKRLPPDALDLLSKLLQYSPSKRLSALEALAHPFFDELRDPNT 317 (364)
T ss_pred HhhcCcccccccCccccccccee----------ecccCCCHHHHHHHHHHhccChhhcCCHHHHhcchhhHHhhCcCc
Confidence 5443321 00000010100000 123347899999999999999999999999999999999988744
No 25
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=1.9e-49 Score=345.64 Aligned_cols=291 Identities=40% Similarity=0.769 Sum_probs=235.8
Q ss_pred cchhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEc
Q 035861 8 RSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMD 87 (332)
Q Consensus 8 ~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~ 87 (332)
..+++|.+++.||+|+||+||+|.+..+++.+|+|.+........ ...+.+|+.++++++|+||+++++.+..
T Consensus 3 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~-------~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 75 (309)
T cd07872 3 GKMETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGA-------PCTAIREVSLLKDLKHANIVTLHDIVHT 75 (309)
T ss_pred CCCCceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCc-------chhHHHHHHHHHhCCCCCcceEEEEEee
Confidence 456789999999999999999999999999999999875432211 1135689999999999999999999854
Q ss_pred CCCeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeeccccccc
Q 035861 88 DHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQY 167 (332)
Q Consensus 88 ~~~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~ 167 (332)
+ ...++||||+++++...+......+++..+..++.||+.||+|||++||+||||||+||+++.++.++|+|||.+...
T Consensus 76 ~-~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~ 154 (309)
T cd07872 76 D-KSLTLVFEYLDKDLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAK 154 (309)
T ss_pred C-CeEEEEEeCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECccccceec
Confidence 4 789999999999988888776677899999999999999999999999999999999999999999999999998765
Q ss_pred CCCCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCC
Q 035861 168 GSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSE 247 (332)
Q Consensus 168 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (332)
...........++..|+|||.+.+...++.++|+||||+++|+|++|..||...+..+....+.+..+.+....++.+..
T Consensus 155 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (309)
T cd07872 155 SVPTKTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISS 234 (309)
T ss_pred CCCccccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcc
Confidence 44333334456788999999987756789999999999999999999999999888888888888877777766655432
Q ss_pred CccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCC
Q 035861 248 LPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVP 313 (332)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~ 313 (332)
...... .. .....+.......+.++.++++||.+||+.||.+|||++|+++||||+.+.
T Consensus 235 ~~~~~~-~~------~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~~ 293 (309)
T cd07872 235 NDEFKN-YN------FPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKHAYFRSLG 293 (309)
T ss_pred hhhhhh-hh------cCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcChhhhhcc
Confidence 211000 00 000001111122244788999999999999999999999999999999875
No 26
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=1.7e-48 Score=339.72 Aligned_cols=306 Identities=62% Similarity=1.078 Sum_probs=246.1
Q ss_pred cccchhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeE
Q 035861 6 GCRSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVV 85 (332)
Q Consensus 6 ~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~ 85 (332)
.|+.+++|++.+.||.|++|.||+|.+..+++.||+|++........ ......+|+.++++++|+|++++++++
T Consensus 2 ~~~~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~------~~~~~~~E~~~l~~l~h~~i~~~~~~~ 75 (309)
T cd07845 2 RCRSVTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDG------IPISSLREITLLLNLRHPNIVELKEVV 75 (309)
T ss_pred CcccccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCC------CcchhhHHHHHHHhCCCCCCcceEEEE
Confidence 46788999999999999999999999999999999999875432211 112345799999999999999999998
Q ss_pred EcCC-CeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccc
Q 035861 86 MDDH-DSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMS 164 (332)
Q Consensus 86 ~~~~-~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~ 164 (332)
.... ...++|+||+++++.+.+......+++..++.++.||+.||++||+.|++|+||+|+||+++.++.++|+|||.+
T Consensus 76 ~~~~~~~~~lv~e~~~~~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~kL~dfg~~ 155 (309)
T cd07845 76 VGKHLDSIFLVMEYCEQDLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLTDKGCLKIADFGLA 155 (309)
T ss_pred ecCCCCeEEEEEecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECcccee
Confidence 5543 568999999999888887776678999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccC
Q 035861 165 RQYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPG 244 (332)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (332)
..............++..|+|||.+.+...++.++|+||||+++|+|++|..||...+..+....+....+.+....++.
T Consensus 156 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (309)
T cd07845 156 RTYGLPAKPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPG 235 (309)
T ss_pred eecCCccCCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchh
Confidence 87654333334445677899999987656789999999999999999999999999998888888888777776666655
Q ss_pred CCCCccc-cccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCCCCCCCCCCCC
Q 035861 245 LSELPGA-KANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVPLPKSKDFMPT 323 (332)
Q Consensus 245 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~~~~~~~~~ 323 (332)
+...+.. .............. ..+..++.+.+||.+||+.||++||+++++++||||.+...+-....+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h~~f~~~~~~~~~~~~~~ 307 (309)
T cd07845 236 FSDLPLVGKFTLPKQPYNNLKH--------KFPWLSEAGLRLLNFLLMYDPKKRATAEEALESSYFKEKPLPCEPEMMPT 307 (309)
T ss_pred hhcccccccccccCCCCCchHH--------hccccCHHHHHHHHHHhcCChhhCcCHHHHhcChhhccCCCCCCCCcCCC
Confidence 4433221 01111111111110 11225888999999999999999999999999999999998876667776
Q ss_pred CC
Q 035861 324 FP 325 (332)
Q Consensus 324 ~~ 325 (332)
||
T Consensus 308 ~~ 309 (309)
T cd07845 308 FP 309 (309)
T ss_pred CC
Confidence 64
No 27
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=1.2e-49 Score=348.82 Aligned_cols=257 Identities=28% Similarity=0.417 Sum_probs=211.8
Q ss_pred ccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCCeEEEEc
Q 035861 17 NKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHDSVYMVM 96 (332)
Q Consensus 17 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~lv~ 96 (332)
+.||+|+||.||++++..+++.||+|++.......... ...+..|+.++++++||||+.+++.+. .....|+||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~-----~~~~~~e~~~l~~l~hp~i~~~~~~~~-~~~~~~lv~ 74 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDE-----VAHTLTESRVLQNTRHPFLTALKYSFQ-THDRLCFVM 74 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHH-----HHHHHHHHHHHHhCCCCCCCCEEEEEE-cCCEEEEEE
Confidence 46899999999999999999999999997643221111 113568999999999999999999884 447899999
Q ss_pred ccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCCCCCCCcc
Q 035861 97 EYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTS 176 (332)
Q Consensus 97 e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~~~~~~~~ 176 (332)
||++|+.+......++.+++..+..++.||+.||+|||++||+|+||||+||+++.++.++|+|||++............
T Consensus 75 e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~ 154 (323)
T cd05571 75 EYANGGELFFHLSRERVFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGATMKT 154 (323)
T ss_pred eCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEeeCCCCcccccCCCcccc
Confidence 99998665555555778999999999999999999999999999999999999999999999999998754333333345
Q ss_pred ccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCCcccccccc
Q 035861 177 LVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGAKANFA 256 (332)
Q Consensus 177 ~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (332)
..|++.|+|||++.+ ..++.++|+||||+++|+|++|..||...+.......+.....
T Consensus 155 ~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~~--------------------- 212 (323)
T cd05571 155 FCGTPEYLAPEVLED-NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEI--------------------- 212 (323)
T ss_pred eecCccccChhhhcC-CCCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCC---------------------
Confidence 678999999999976 6789999999999999999999999988776655554432211
Q ss_pred CCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCC-----CHHHHhcCCCCCCCCCCCC
Q 035861 257 KQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRI-----TVDDALNHYWFHEVPLPKS 317 (332)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp-----s~~ell~hp~f~~~~~~~~ 317 (332)
..+..++.++.+||.+||+.||++|| ++.++++||||..+.+...
T Consensus 213 ----------------~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h~~f~~~~~~~~ 262 (323)
T cd05571 213 ----------------RFPRTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEHRFFASINWQDV 262 (323)
T ss_pred ----------------CCCCCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHcCCCcCCCCHHHH
Confidence 11223788999999999999999999 8999999999999875554
No 28
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=1.5e-49 Score=343.20 Aligned_cols=259 Identities=28% Similarity=0.403 Sum_probs=215.0
Q ss_pred hcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCC
Q 035861 11 FEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHD 90 (332)
Q Consensus 11 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 90 (332)
++|++.+.||+|+||+||+|.+..+++.||+|++.......... ...+.+|+.++++++||||+++++.+ .+..
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~-----~~~~~~E~~~l~~l~hp~iv~~~~~~-~~~~ 74 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQ-----EQHVHNEKRVLKEVSHPFIIRLFWTE-HDQR 74 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHH-----HHHHHHHHHHHHhCCCCcHhhhHhhh-ccCC
Confidence 47999999999999999999999999999999997543211111 12456899999999999999999988 4457
Q ss_pred eEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCCC
Q 035861 91 SVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSP 170 (332)
Q Consensus 91 ~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~~ 170 (332)
..++||||++|+.+.......+.+++..+..++.|++.||+|||++|++|+||||+||+++.++.++|+|||++......
T Consensus 75 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~ 154 (291)
T cd05612 75 FLYMLMEYVPGGELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDR 154 (291)
T ss_pred eEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEEecCcchhccCC
Confidence 89999999987544444444678999999999999999999999999999999999999999999999999998765332
Q ss_pred CCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCCcc
Q 035861 171 LKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPG 250 (332)
Q Consensus 171 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (332)
.....|++.|+|||++.+ ..++.++|+||||+++|+|++|..||...+.......+......
T Consensus 155 ---~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~-------------- 216 (291)
T cd05612 155 ---TWTLCGTPEYLAPEVIQS-KGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKILAGKLE-------------- 216 (291)
T ss_pred ---cccccCChhhcCHHHHcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCcC--------------
Confidence 234568999999999876 66899999999999999999999999988776666665443111
Q ss_pred ccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCC-----HHHHhcCCCCCCCCCCC
Q 035861 251 AKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRIT-----VDDALNHYWFHEVPLPK 316 (332)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps-----~~ell~hp~f~~~~~~~ 316 (332)
.+..++..+++||++||+.||.+|++ ++++++||||..+.+..
T Consensus 217 -----------------------~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~~~~~ 264 (291)
T cd05612 217 -----------------------FPRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNHRWFKSVDWDD 264 (291)
T ss_pred -----------------------CCccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcCccccCCCHHH
Confidence 11226888999999999999999995 99999999999887654
No 29
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=7.1e-50 Score=337.13 Aligned_cols=261 Identities=30% Similarity=0.454 Sum_probs=211.3
Q ss_pred hcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCC
Q 035861 11 FEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHD 90 (332)
Q Consensus 11 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 90 (332)
.++...+.||+|+||+||++.+..+|+..|||.+....... ...+.+|+.+|.+++||||++++|.......
T Consensus 17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~--------~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~ 88 (313)
T KOG0198|consen 17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPT--------SESLEREIRILSRLNHPNIVQYYGSSSSREN 88 (313)
T ss_pred chhhhhccccCccceEEEEEEecCCCcceeeeeeecccchh--------HHHHHHHHHHHHhCCCCCEEeeCCccccccC
Confidence 46899999999999999999999999999999998763222 2246799999999999999999997544433
Q ss_pred -eEEEEcccccccHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcC-CCcEEEeeccccccc
Q 035861 91 -SVYMVMEYMEHDLKWLMESMKQ-PFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNN-QGVLKICDFGMSRQY 167 (332)
Q Consensus 91 -~~~lv~e~~~~~l~~~~~~~~~-~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~-~~~~~l~df~~~~~~ 167 (332)
.+++.|||++|+.+..+..+.+ .++++.+..+..|+++||+|||++|++|+||||+|||++. ++.+||+|||.+...
T Consensus 89 ~~~~i~mEy~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~ 168 (313)
T KOG0198|consen 89 DEYNIFMEYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLDPSNGDVKLADFGLAKKL 168 (313)
T ss_pred eeeEeeeeccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEeCCCCeEEeccCcccccc
Confidence 7999999999765555544444 8999999999999999999999999999999999999999 799999999998876
Q ss_pred CC---CCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCC-ChHHHHHHHHHHcCCCCCCccc
Q 035861 168 GS---PLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGT-TEVDQIDKIFKTLGTPTETIWP 243 (332)
Q Consensus 168 ~~---~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~-~~~~~~~~~~~~~~~~~~~~~~ 243 (332)
.. .........||+.|+|||++..+.....++|||||||++.||+||..||... ...+....+......|
T Consensus 169 ~~~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~~~~~ig~~~~~P------ 242 (313)
T KOG0198|consen 169 ESKGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEEAEALLLIGREDSLP------ 242 (313)
T ss_pred ccccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcchHHHHHHHhccCCCC------
Confidence 53 1122345789999999999986333446999999999999999999999873 3333333332221001
Q ss_pred CCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCCC
Q 035861 244 GLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVPL 314 (332)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~ 314 (332)
..+..+|+++++||++|+..||+.||||+++|+|||.++-..
T Consensus 243 -----------------------------~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~~~~~ 284 (313)
T KOG0198|consen 243 -----------------------------EIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFLKQNSI 284 (313)
T ss_pred -----------------------------CCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhChhhhcccc
Confidence 112338999999999999999999999999999999988554
No 30
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=1.7e-49 Score=348.48 Aligned_cols=264 Identities=30% Similarity=0.408 Sum_probs=218.6
Q ss_pred cccchhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeE
Q 035861 6 GCRSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVV 85 (332)
Q Consensus 6 ~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~ 85 (332)
....+++|++.+.||+|+||.||+|++..+++.||+|++......... ....+.+|+.++++++||||+++++.+
T Consensus 13 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~-----~~~~~~~E~~~l~~l~hp~iv~~~~~~ 87 (329)
T PTZ00263 13 SSWKLSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMK-----QVQHVAQEKSILMELSHPFIVNMMCSF 87 (329)
T ss_pred CCCCchheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhh-----hHHHHHHHHHHHHhCCCCCCCcEEEEE
Confidence 345678999999999999999999999999999999999764321111 112467899999999999999999998
Q ss_pred EcCCCeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeeccccc
Q 035861 86 MDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSR 165 (332)
Q Consensus 86 ~~~~~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~ 165 (332)
.. ....|+||||+.|+.+.......+.+++..+..++.||+.||+|||++||+|+||||+||+++.++.++|+|||++.
T Consensus 88 ~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~ 166 (329)
T PTZ00263 88 QD-ENRVYFLLEFVVGGELFTHLRKAGRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLDNKGHVKVTDFGFAK 166 (329)
T ss_pred Ec-CCEEEEEEcCCCCChHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEECCCCCEEEeeccCce
Confidence 54 47899999999876554444446789999999999999999999999999999999999999999999999999988
Q ss_pred ccCCCCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCC
Q 035861 166 QYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGL 245 (332)
Q Consensus 166 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (332)
..... .....|++.|+|||++.+ ..++.++|+||||+++|+|++|..||...+.......+......
T Consensus 167 ~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~--------- 233 (329)
T PTZ00263 167 KVPDR---TFTLCGTPEYLAPEVIQS-KGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILAGRLK--------- 233 (329)
T ss_pred EcCCC---cceecCChhhcCHHHHcC-CCCCCcceeechHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCcC---------
Confidence 65432 234578999999999987 66789999999999999999999999887776666555432111
Q ss_pred CCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCC-----HHHHhcCCCCCCCCCCC
Q 035861 246 SELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRIT-----VDDALNHYWFHEVPLPK 316 (332)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps-----~~ell~hp~f~~~~~~~ 316 (332)
.+..++..+++||.+||+.||.+|++ ++++++||||.+..+..
T Consensus 234 ----------------------------~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~hp~f~~~~~~~ 281 (329)
T PTZ00263 234 ----------------------------FPNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNHPYFHGANWDK 281 (329)
T ss_pred ----------------------------CCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCccCCCCHHH
Confidence 11226888999999999999999996 79999999999876543
No 31
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=1.8e-48 Score=338.25 Aligned_cols=291 Identities=39% Similarity=0.755 Sum_probs=234.1
Q ss_pred ccchhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEE
Q 035861 7 CRSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVM 86 (332)
Q Consensus 7 ~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~ 86 (332)
...+++|.+.+.||.|++|.||+|.+..+++.||+|.+........ ...+.+|+..++.++|+||+++++.+.
T Consensus 2 ~~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~-------~~~~~~E~~~l~~l~h~nI~~~~~~~~ 74 (301)
T cd07873 2 FGKLETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGA-------PCTAIREVSLLKDLKHANIVTLHDIIH 74 (301)
T ss_pred CccccceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCc-------hhHHHHHHHHHHhcCCCCcceEEEEEe
Confidence 3467899999999999999999999999999999999875432211 113568999999999999999999985
Q ss_pred cCCCeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccc
Q 035861 87 DDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQ 166 (332)
Q Consensus 87 ~~~~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~ 166 (332)
. ....++|+||+++++...+......+++..+..++.|++.||+|||+.|++|+||+|+||+++.++.++|+|||.+..
T Consensus 75 ~-~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~ 153 (301)
T cd07873 75 T-EKSLTLVFEYLDKDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLINERGELKLADFGLARA 153 (301)
T ss_pred c-CCeEEEEEeccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEECCCCcEEECcCcchhc
Confidence 4 478999999999998888877677899999999999999999999999999999999999999999999999999876
Q ss_pred cCCCCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCC
Q 035861 167 YGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLS 246 (332)
Q Consensus 167 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (332)
............++..|+|||.+.+...++.++|+||||+++|+|++|..||...+..+....+....+.+....++.+.
T Consensus 154 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (301)
T cd07873 154 KSIPTKTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGIL 233 (301)
T ss_pred cCCCCCcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhh
Confidence 54333333444668899999998775678899999999999999999999999888877777777777766666555432
Q ss_pred CCccccc-cccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCC
Q 035861 247 ELPGAKA-NFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVP 313 (332)
Q Consensus 247 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~ 313 (332)
....... .... ..........+.+++.+++||.+||+.||.+|||++|+|+||||+.+.
T Consensus 234 ~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h~~f~~~~ 293 (301)
T cd07873 234 SNEEFKSYNYPK--------YRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHPYFHCLG 293 (301)
T ss_pred ccccccccccCc--------cccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcCccccccc
Confidence 2111000 0000 000111122345788999999999999999999999999999998876
No 32
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=7.3e-49 Score=338.53 Aligned_cols=286 Identities=36% Similarity=0.618 Sum_probs=220.4
Q ss_pred hcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCC
Q 035861 11 FEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHD 90 (332)
Q Consensus 11 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 90 (332)
++|++.+.||+|++|+||+++++.+++.+|+|++........ ....+.+|+.+++.++|+||+++++.+ ..+.
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~------~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~ 73 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEE------VKETTLRELKMLRTLKQENIVELKEAF-RRRG 73 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEeccccccc------chhhHHHHHHHHHhCCCccccchhhhE-ecCC
Confidence 479999999999999999999999999999999975432211 122467899999999999999999988 4457
Q ss_pred eEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCCC
Q 035861 91 SVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSP 170 (332)
Q Consensus 91 ~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~~ 170 (332)
..++||||+++++++.+......+++..++.++.|++.||+|||+.|++|+||||+||+++.++.++|+|||.+......
T Consensus 74 ~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 153 (287)
T cd07848 74 KLYLVFEYVEKNMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLISHNDVLKLCDFGFARNLSEG 153 (287)
T ss_pred EEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccCccccccc
Confidence 89999999999988877766678999999999999999999999999999999999999999999999999998765332
Q ss_pred C-CCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCCc
Q 035861 171 L-KPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELP 249 (332)
Q Consensus 171 ~-~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (332)
. .......++..|+|||++.+ ..++.++|+||||+++|+|++|..||...+..+....+....+..+...+..+...+
T Consensus 154 ~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (287)
T cd07848 154 SNANYTEYVATRWYRSPELLLG-APYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNP 232 (287)
T ss_pred ccccccccccccccCCcHHHcC-CCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccc
Confidence 1 22234568899999999977 568999999999999999999999999877766666655554444332222111100
Q ss_pred cccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCC
Q 035861 250 GAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWF 309 (332)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f 309 (332)
... ...... ..............+|.++.+||.+||+.||++|||++|+|+||||
T Consensus 233 ~~~----~~~~~~-~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~hp~f 287 (287)
T cd07848 233 RFH----GLRFPA-VNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNHPAF 287 (287)
T ss_pred hhc----ccccCc-ccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence 000 000000 0000000001112378899999999999999999999999999998
No 33
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=1e-48 Score=345.44 Aligned_cols=294 Identities=36% Similarity=0.613 Sum_probs=223.5
Q ss_pred cccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCC--
Q 035861 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDH-- 89 (332)
Q Consensus 12 ~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-- 89 (332)
+|++.+.||+|+||.||+|++..++..||||++......... ...+.+|+.+++.++||||+++++++....
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~------~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~ 74 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSD------ATRILREIKLLRLLRHPDIVEIKHIMLPPSRR 74 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchh------HHHHHHHHHHHHhCCCCCEeeecceEeccCCC
Confidence 589999999999999999999999999999998643221111 124678999999999999999999875432
Q ss_pred --CeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeeccccccc
Q 035861 90 --DSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQY 167 (332)
Q Consensus 90 --~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~ 167 (332)
...|+||||+++++.+.+.. ...+++..+..++.||+.||+|||++||+|+||||+||+++.++.++|+|||.+...
T Consensus 75 ~~~~~~lv~e~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~ 153 (338)
T cd07859 75 EFKDIYVVFELMESDLHQVIKA-NDDLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVA 153 (338)
T ss_pred CCceEEEEEecCCCCHHHHHHh-cccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEccCcccccc
Confidence 35899999999888776654 567999999999999999999999999999999999999999999999999998754
Q ss_pred CCCC---CCCccccccccccchhhhcCC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCccc
Q 035861 168 GSPL---KPYTSLVVTLWYRAPELLLGA-KKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWP 243 (332)
Q Consensus 168 ~~~~---~~~~~~~~~~~y~aPE~~~~~-~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (332)
.... .......++..|+|||++.+. ..++.++|+||||+++|+|++|..||...+.......+....+.++.....
T Consensus 154 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (338)
T cd07859 154 FNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETIS 233 (338)
T ss_pred ccccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHH
Confidence 2211 112345689999999998642 468899999999999999999999998887766666666655555443322
Q ss_pred CCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCCCCCCC
Q 035861 244 GLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVPLPKSK 318 (332)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~~~~ 318 (332)
.+..... ...........+.......+.+++.+.++|.+||+.||++||+++|+|+||||+++......
T Consensus 234 ~i~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~hp~f~~~~~~~~~ 302 (338)
T cd07859 234 RVRNEKA------RRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYFKGLAKVERE 302 (338)
T ss_pred HhhhhhH------HHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcCchhhhcCccccc
Confidence 2211000 00000000011111111223478889999999999999999999999999999998765443
No 34
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=6.5e-49 Score=329.54 Aligned_cols=282 Identities=25% Similarity=0.352 Sum_probs=236.5
Q ss_pred cccchhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeE
Q 035861 6 GCRSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVV 85 (332)
Q Consensus 6 ~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~ 85 (332)
+.-.++.|++++.||.|.-|+||++....++..+|+|++.+....... ...+...|.++|..+.||.+..++..+
T Consensus 72 ~~l~l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rk-----Kl~Ra~tE~eIL~~lDHPFlPTLYa~f 146 (459)
T KOG0610|consen 72 GSLGLRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRK-----KLKRAQTEREILSLLDHPFLPTLYASF 146 (459)
T ss_pred CccCHHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhh-----HHHHHHHHHHHHHhcCCCccchhhhee
Confidence 445577999999999999999999999999999999999876543322 223456899999999999999999999
Q ss_pred EcCCCeEEEEcccccccHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeeccc
Q 035861 86 MDDHDSVYMVMEYMEHDLKWLMESM--KQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGM 163 (332)
Q Consensus 86 ~~~~~~~~lv~e~~~~~l~~~~~~~--~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~ 163 (332)
+.+.+.|++||||+|+-+..++.+ ++.+++..++.++..++.||+|||-.||++|||||+||||.++|+|.|+||.+
T Consensus 147 -et~~~~cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENILvredGHIMLsDFDL 225 (459)
T KOG0610|consen 147 -ETDKYSCLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPENILVREDGHIMLSDFDL 225 (459)
T ss_pred -eccceeEEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeEEecCCcEEeeeccc
Confidence 555999999999998665555543 35699999999999999999999999999999999999999999999999988
Q ss_pred ccccCC---------------------------------CCC-----------------------CCccccccccccchh
Q 035861 164 SRQYGS---------------------------------PLK-----------------------PYTSLVVTLWYRAPE 187 (332)
Q Consensus 164 ~~~~~~---------------------------------~~~-----------------------~~~~~~~~~~y~aPE 187 (332)
+..... ... ......||-.|.|||
T Consensus 226 S~~~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPE 305 (459)
T KOG0610|consen 226 SLRCPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPE 305 (459)
T ss_pred cccCCCCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccce
Confidence 643210 000 011235677899999
Q ss_pred hhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCCccccccccCCchhhhhhhC
Q 035861 188 LLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGAKANFAKQPYNLLRKRF 267 (332)
Q Consensus 188 ~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (332)
++.+ ...+.+.|+|+||+++|||+.|..||.+.+..+++.++.......+
T Consensus 306 vI~G-~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~~l~Fp----------------------------- 355 (459)
T KOG0610|consen 306 VIRG-EGHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQPLKFP----------------------------- 355 (459)
T ss_pred eeec-CCCCchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcCCCcCC-----------------------------
Confidence 9998 5689999999999999999999999999999999988876432222
Q ss_pred CCCccCCCCCCCchHHHHHHHhcCCCCCCCCC----HHHHhcCCCCCCCCCCCCCCCCCCCCCccc
Q 035861 268 PAASFTGSPVLSESGFDLLNRLLTYDPEKRIT----VDDALNHYWFHEVPLPKSKDFMPTFPPQHA 329 (332)
Q Consensus 268 ~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps----~~ell~hp~f~~~~~~~~~~~~~~~~~~~~ 329 (332)
..+.++..++|||+++|.+||.+|.. |.||=+||||..++|.-++..-|++.|+.-
T Consensus 356 ------~~~~vs~~akDLIr~LLvKdP~kRlg~~rGA~eIK~HpFF~gVnWaLir~~~PP~iP~~~ 415 (459)
T KOG0610|consen 356 ------EEPEVSSAAKDLIRKLLVKDPSKRLGSKRGAAEIKRHPFFEGVNWALIRCARPPEIPKPV 415 (459)
T ss_pred ------CCCcchhHHHHHHHHHhccChhhhhccccchHHhhcCccccCCChhheeccCCCcCCCcc
Confidence 22348899999999999999999998 999999999999999999998888887653
No 35
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.5e-49 Score=332.66 Aligned_cols=275 Identities=24% Similarity=0.374 Sum_probs=223.1
Q ss_pred ccccchhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeee
Q 035861 5 QGCRSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEV 84 (332)
Q Consensus 5 ~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~ 84 (332)
......++|++...||.|..++||+|+...+++.||||++.......+. ..+.+|+..++.+.||||+.++..
T Consensus 20 ~~p~n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~l-------d~l~kE~~~msl~~HPNIv~~~~s 92 (516)
T KOG0582|consen 20 EFPLNAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDL-------DALRKEVQTMSLIDHPNIVTYHCS 92 (516)
T ss_pred cCCCCccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhH-------HHHHHHHHHhhhcCCCCcceEEEE
Confidence 3445667999999999999999999999999999999999876654431 257799999999999999999999
Q ss_pred EEcCCCeEEEEcccccc-cHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecc
Q 035861 85 VMDDHDSVYMVMEYMEH-DLKWLMESM-KQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFG 162 (332)
Q Consensus 85 ~~~~~~~~~lv~e~~~~-~l~~~~~~~-~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~ 162 (332)
|+.+ ..+|+||.++.+ ++++.+... ...++|..+..|+++++.||.|||++|.+|||||+.||||+.+|.|+|+|||
T Consensus 93 Fvv~-~~LWvVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi~~dG~VkLadFg 171 (516)
T KOG0582|consen 93 FVVD-SELWVVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGHIHRDVKAGNILIDSDGTVKLADFG 171 (516)
T ss_pred EEec-ceeEEeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEEcCCCcEEEcCce
Confidence 9666 889999999996 455555443 4569999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCCCCC----ccccccccccchhhh-cCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCC
Q 035861 163 MSRQYGSPLKPY----TSLVVTLWYRAPELL-LGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTP 237 (332)
Q Consensus 163 ~~~~~~~~~~~~----~~~~~~~~y~aPE~~-~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~ 237 (332)
.+.......... ....|+++|+|||++ .....|+.++||||||++..|+++|..||........+..-.+ +.+
T Consensus 172 vsa~l~~~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLq--n~p 249 (516)
T KOG0582|consen 172 VSASLFDSGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQ--NDP 249 (516)
T ss_pred eeeeecccCceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhc--CCC
Confidence 776543222221 456899999999995 4446699999999999999999999999998877655443333 222
Q ss_pred CCCcccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCCC
Q 035861 238 TETIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVPL 314 (332)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~ 314 (332)
+..... ....+....++.+++.+|..||.+||++|||++++|+|+||++...
T Consensus 250 p~~~t~-------------------------~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh~FFk~~k~ 301 (516)
T KOG0582|consen 250 PTLLTS-------------------------GLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKHAFFKKAKS 301 (516)
T ss_pred CCcccc-------------------------cCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhccHHHhhccc
Confidence 221110 1111122336789999999999999999999999999999999763
No 36
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=6e-49 Score=345.92 Aligned_cols=278 Identities=30% Similarity=0.463 Sum_probs=225.6
Q ss_pred hcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCC
Q 035861 11 FEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHD 90 (332)
Q Consensus 11 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 90 (332)
++|++++.||+|+||.||+|.+..+++.||||++.......... ...+..|+.++..++||||+++++.+. +..
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~-----~~~~~~e~~~l~~~~h~~iv~~~~~~~-~~~ 74 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNE-----VRHVLTERDILTTTKSEWLVKLLYAFQ-DDE 74 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhH-----HHHHHHHHHHHHhCCCCCCccEEEEEE-cCC
Confidence 47999999999999999999999999999999997653221111 124668999999999999999999884 457
Q ss_pred eEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCCC
Q 035861 91 SVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSP 170 (332)
Q Consensus 91 ~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~~ 170 (332)
..|+||||++|+.+..+....+.+++..+..++.||+.||+|||++|++|+||||+||+++.++.++|+|||++.....
T Consensus 75 ~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~- 153 (333)
T cd05600 75 YLYLAMEYVPGGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLIDASGHIKLTDFGLSKGIVT- 153 (333)
T ss_pred EEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEEEeCcCCccccc-
Confidence 8999999998765555555577899999999999999999999999999999999999999999999999999876533
Q ss_pred CCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCCcc
Q 035861 171 LKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPG 250 (332)
Q Consensus 171 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (332)
......|++.|+|||.+.+ ..++.++|+||||+++|+|++|..||...+..+....+...........
T Consensus 154 --~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~--------- 221 (333)
T cd05600 154 --YANSVVGSPDYMAPEVLRG-KGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQRPV--------- 221 (333)
T ss_pred --ccCCcccCccccChhHhcC-CCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhccccccCCC---------
Confidence 2345578999999999987 5789999999999999999999999998877666655543211110000
Q ss_pred ccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCCCCCCCCCCCCCCCc
Q 035861 251 AKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVPLPKSKDFMPTFPPQ 327 (332)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~~~~~~~~~~~~~ 327 (332)
.......++.++.+||.+||..+|.+||+++++++||||.++.+.......+++.|.
T Consensus 222 --------------------~~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h~~~~~~~~~~~~~~~~~~~~~ 278 (333)
T cd05600 222 --------------------YDDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNHPFFKEVDWNELRELKPPFVPE 278 (333)
T ss_pred --------------------CCccccccCHHHHHHHHHHhhChhhhcCCHHHHHhCcccCCCCHHHHhhCCCCCCCC
Confidence 000012368899999999999999999999999999999998876666555556554
No 37
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=6e-49 Score=345.87 Aligned_cols=274 Identities=25% Similarity=0.350 Sum_probs=222.1
Q ss_pred ccchhcccccccccccCcEEEEEEEECCCC-cEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeE
Q 035861 7 CRSVFEFEKLNKISEGTYGIVYRARDKKSG-EIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVV 85 (332)
Q Consensus 7 ~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~-~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~ 85 (332)
...+++|++.+.||+|+||.||+|.+..++ ..||+|++.......... ...+.+|+.+++.++||||+++++.+
T Consensus 26 ~~~~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~-----~~~~~~E~~~l~~l~hp~Iv~~~~~~ 100 (340)
T PTZ00426 26 KMKYEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQ-----VDHVFSERKILNYINHPFCVNLYGSF 100 (340)
T ss_pred CCChhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhh-----HHHHHHHHHHHHhCCCCCCcceEEEE
Confidence 345679999999999999999999876554 689999987543222111 12456899999999999999999998
Q ss_pred EcCCCeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeeccccc
Q 035861 86 MDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSR 165 (332)
Q Consensus 86 ~~~~~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~ 165 (332)
.+ ....|+||||++|+.+......++.+++..+..++.||+.||+|||+.|++|+||||+||+++.++.++|+|||++.
T Consensus 101 ~~-~~~~~lv~Ey~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~ikL~DFG~a~ 179 (340)
T PTZ00426 101 KD-ESYLYLVLEFVIGGEFFTFLRRNKRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLDKDGFIKMTDFGFAK 179 (340)
T ss_pred Ee-CCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEecCCCCe
Confidence 44 47899999999876555555557789999999999999999999999999999999999999999999999999987
Q ss_pred ccCCCCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCC
Q 035861 166 QYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGL 245 (332)
Q Consensus 166 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (332)
..... .....|++.|+|||++.+ ..++.++|+||||+++|+|++|..||...+.......+.......
T Consensus 180 ~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~~~-------- 247 (340)
T PTZ00426 180 VVDTR---TYTLCGTPEYIAPEILLN-VGHGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQKILEGIIYF-------- 247 (340)
T ss_pred ecCCC---cceecCChhhcCHHHHhC-CCCCccccccchhhHHHHHhcCCCCCCCCCHHHHHHHHhcCCCCC--------
Confidence 65432 234578999999999976 668899999999999999999999999887766666654332111
Q ss_pred CCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCC-----CHHHHhcCCCCCCCCCCCC--C
Q 035861 246 SELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRI-----TVDDALNHYWFHEVPLPKS--K 318 (332)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp-----s~~ell~hp~f~~~~~~~~--~ 318 (332)
++.+++.+.++|++||+.||++|+ +++++++||||.++.+... .
T Consensus 248 -----------------------------p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~hp~f~~~~~~~~~~~ 298 (340)
T PTZ00426 248 -----------------------------PKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEHPWFGNIDWVSLLHK 298 (340)
T ss_pred -----------------------------CCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcCCCcCCCCHHHHHhC
Confidence 122688899999999999999995 8999999999999876554 2
Q ss_pred CCCCCCCCc
Q 035861 319 DFMPTFPPQ 327 (332)
Q Consensus 319 ~~~~~~~~~ 327 (332)
....++.|+
T Consensus 299 ~~~~~~~p~ 307 (340)
T PTZ00426 299 NVEVPYKPK 307 (340)
T ss_pred CCCCCcCCC
Confidence 334455554
No 38
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-48 Score=293.05 Aligned_cols=288 Identities=43% Similarity=0.806 Sum_probs=252.3
Q ss_pred hcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCC
Q 035861 11 FEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHD 90 (332)
Q Consensus 11 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 90 (332)
.+|+..++||+|.+|+||++++..+++.||+|.++...... .+..+.++|+-+++.+.|.||++++++..++ .
T Consensus 2 ~~ydkmekigegtygtvfkarn~~t~eivalkrvrldddde------gvpssalreicllkelkhknivrl~dvlhsd-k 74 (292)
T KOG0662|consen 2 QKYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDE------GVPSSALREICLLKELKHKNIVRLHDVLHSD-K 74 (292)
T ss_pred cchHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCC------CCcHHHHHHHHHHHHhhhcceeehhhhhccC-c
Confidence 47889999999999999999999999999999998765432 3334678999999999999999999998555 7
Q ss_pred eEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCCC
Q 035861 91 SVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSP 170 (332)
Q Consensus 91 ~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~~ 170 (332)
...+|+|+|..++.......++.++.+.+..++.|++.+|.++|++++.|+|+||.|.+|..+|.+|+.|||+++..+-+
T Consensus 75 kltlvfe~cdqdlkkyfdslng~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnllin~ngelkladfglarafgip 154 (292)
T KOG0662|consen 75 KLTLVFEFCDQDLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLINRNGELKLADFGLARAFGIP 154 (292)
T ss_pred eeEEeHHHhhHHHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEeccCCcEEecccchhhhcCCc
Confidence 78899999999999999999999999999999999999999999999999999999999999999999999999998877
Q ss_pred CCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCCc
Q 035861 171 LKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA-KKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELP 249 (332)
Q Consensus 171 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (332)
..-+.....|.+|++|.++.+.+-|+.+.|+||.|+++.|+.. |.+.|.+.+..+...+++..++.+.++.||++..++
T Consensus 155 vrcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lp 234 (292)
T KOG0662|consen 155 VRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLP 234 (292)
T ss_pred eEeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCC
Confidence 7777777889999999999998899999999999999999987 888899999999999999999999999999999887
Q ss_pred cccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCC
Q 035861 250 GAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVP 313 (332)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~ 313 (332)
.....-.-..-..... .-|.++...++|++++|.-+|.+|+++++.|+||||.+..
T Consensus 235 dyk~yp~ypattswsq--------ivp~lns~grdllqkll~cnp~qrisaeaalqhpyf~d~s 290 (292)
T KOG0662|consen 235 DYKPYPIYPATTSWSQ--------IVPKLNSTGRDLLQKLLKCNPAQRISAEAALQHPYFSDFS 290 (292)
T ss_pred CCcccCCccccchHHH--------HhhhhcchhHHHHHHHhccCcccccCHHHHhcCccccccC
Confidence 6543211111111111 1233667788999999999999999999999999999864
No 39
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=8.8e-49 Score=343.14 Aligned_cols=268 Identities=26% Similarity=0.424 Sum_probs=215.6
Q ss_pred ccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCCeEEEEc
Q 035861 17 NKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHDSVYMVM 96 (332)
Q Consensus 17 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~lv~ 96 (332)
+.||+|+||.||++.+..++..||+|++.......... ...+.+|+.+++.++||||+.+++.+..+ ...|+||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~-----~~~~~~E~~~l~~l~hp~i~~~~~~~~~~-~~~~lv~ 74 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDE-----VAHTVTESRVLQNTRHPFLTALKYAFQTH-DRLCFVM 74 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHH-----HHHHHHHHHHHHhCCCCCCcceeeEEecC-CEEEEEE
Confidence 46899999999999999999999999997643221111 11345799999999999999999988544 7899999
Q ss_pred ccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCCCCCCCcc
Q 035861 97 EYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTS 176 (332)
Q Consensus 97 e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~~~~~~~~ 176 (332)
||++|+.+.......+.+++..++.++.||+.||+|||++|++|+||||+||+++.++.++|+|||++............
T Consensus 75 E~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~ 154 (323)
T cd05595 75 EYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT 154 (323)
T ss_pred eCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEcCCCCEEecccHHhccccCCCCcccc
Confidence 99998666555555678999999999999999999999999999999999999999999999999988754333333345
Q ss_pred ccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCCcccccccc
Q 035861 177 LVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGAKANFA 256 (332)
Q Consensus 177 ~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (332)
..|++.|+|||.+.+ ..++.++|+||||+++|+|++|..||...+.......+......
T Consensus 155 ~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~-------------------- 213 (323)
T cd05595 155 FCGTPEYLAPEVLED-NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIR-------------------- 213 (323)
T ss_pred ccCCcCcCCcccccC-CCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCC--------------------
Confidence 678999999999876 67899999999999999999999999887766555544322111
Q ss_pred CCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCC-----CHHHHhcCCCCCCCCCCCCC--CCCCCCCCcc
Q 035861 257 KQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRI-----TVDDALNHYWFHEVPLPKSK--DFMPTFPPQH 328 (332)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp-----s~~ell~hp~f~~~~~~~~~--~~~~~~~~~~ 328 (332)
.+..+++++.+||.+||+.||.+|+ ++.++++||||....+.... ...+++.|+.
T Consensus 214 -----------------~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h~~~~~~~~~~~~~~~~~~~~~~~~ 275 (323)
T cd05595 214 -----------------FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLPPFKPQV 275 (323)
T ss_pred -----------------CCCCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcCCCcCCCCHHHHHhCCCCCCcCCCC
Confidence 1123789999999999999999998 89999999999998755432 2334444443
No 40
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-49 Score=336.64 Aligned_cols=273 Identities=32% Similarity=0.484 Sum_probs=226.4
Q ss_pred cccccchhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCC------cchhHHHHHHhhCCCCC
Q 035861 4 LQGCRSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFP------ISSLREINILLSFDHPS 77 (332)
Q Consensus 4 ~~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~------~~~~~e~~~l~~l~h~~ 77 (332)
..+...+++|+++..||+|.||.|-+|++..+++.||||++.+.............. ....+|+.+|++|.|||
T Consensus 90 ~~~~k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~n 169 (576)
T KOG0585|consen 90 DQDRKQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPN 169 (576)
T ss_pred cccceehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcC
Confidence 356788999999999999999999999999999999999998766544433322221 25679999999999999
Q ss_pred eeeeeeeEEcC-CCeEEEEcccccccHHHHHHhcCCC-CCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCc
Q 035861 78 IVNVKEVVMDD-HDSVYMVMEYMEHDLKWLMESMKQP-FSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGV 155 (332)
Q Consensus 78 i~~~~~~~~~~-~~~~~lv~e~~~~~l~~~~~~~~~~-l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~ 155 (332)
|++++++..+. ....|+|+|||..+-...... +++ +++.+++.+++++..||+|||..||+||||||+|+|++.+|+
T Consensus 170 VV~LiEvLDDP~s~~~YlVley~s~G~v~w~p~-d~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl~~~g~ 248 (576)
T KOG0585|consen 170 VVKLIEVLDDPESDKLYLVLEYCSKGEVKWCPP-DKPELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNLLLSSDGT 248 (576)
T ss_pred eeEEEEeecCcccCceEEEEEeccCCccccCCC-CcccccHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEEcCCCc
Confidence 99999998332 356999999999665444333 455 999999999999999999999999999999999999999999
Q ss_pred EEEeecccccccCC-----CCCCCccccccccccchhhhcCC---CCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHH
Q 035861 156 LKICDFGMSRQYGS-----PLKPYTSLVVTLWYRAPELLLGA---KKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQI 227 (332)
Q Consensus 156 ~~l~df~~~~~~~~-----~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~ 227 (332)
|||+|||.+..... .......-.||+.|+|||...++ ...+.+.|||||||+||.++.|..||.+....++.
T Consensus 249 VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~~l~ 328 (576)
T KOG0585|consen 249 VKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFELELF 328 (576)
T ss_pred EEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHHHHH
Confidence 99999999876521 11122335799999999998773 34577899999999999999999999999999999
Q ss_pred HHHHHHcCCCCCCcccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCC
Q 035861 228 DKIFKTLGTPTETIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHY 307 (332)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp 307 (332)
.+|.+..-. ++..+++.+.+++||.+||.+||+.|.++.+|-.||
T Consensus 329 ~KIvn~pL~-----------------------------------fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hp 373 (576)
T KOG0585|consen 329 DKIVNDPLE-----------------------------------FPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHP 373 (576)
T ss_pred HHHhcCccc-----------------------------------CCCcccccHHHHHHHHHHhhcChhheeehhhheecc
Confidence 998764221 122234789999999999999999999999999999
Q ss_pred CCCCC
Q 035861 308 WFHEV 312 (332)
Q Consensus 308 ~f~~~ 312 (332)
|...-
T Consensus 374 wvt~~ 378 (576)
T KOG0585|consen 374 WVTRD 378 (576)
T ss_pred eeccC
Confidence 98763
No 41
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=1.1e-48 Score=336.89 Aligned_cols=275 Identities=22% Similarity=0.352 Sum_probs=218.7
Q ss_pred cccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCCe
Q 035861 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHDS 91 (332)
Q Consensus 12 ~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 91 (332)
.|++.+.||+|+||+||++.+..+++.||+|.+.......... ...+.+|+.+++.++|++++.+.+.+.++ ..
T Consensus 1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~-----~~~~~~E~~il~~l~~~~iv~~~~~~~~~-~~ 74 (285)
T cd05631 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKG-----EAMALNEKRILEKVNSRFVVSLAYAYETK-DA 74 (285)
T ss_pred CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhh-----HHHHHHHHHHHHhcCCCcEEEEEEEEccC-Ce
Confidence 3788999999999999999999999999999987543222111 12456899999999999999999988444 78
Q ss_pred EEEEcccccccHHH-HHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCC
Q 035861 92 VYMVMEYMEHDLKW-LMES-MKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGS 169 (332)
Q Consensus 92 ~~lv~e~~~~~l~~-~~~~-~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~ 169 (332)
.++|+||++|+.+. .+.. ....+++..+..++.|++.||+|||+.|++|+||||+||+++.++.++|+|||++.....
T Consensus 75 ~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~ 154 (285)
T cd05631 75 LCLVLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILLDDRGHIRISDLGLAVQIPE 154 (285)
T ss_pred EEEEEEecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCC
Confidence 99999999975443 4333 234689999999999999999999999999999999999999999999999999876532
Q ss_pred CCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCCc
Q 035861 170 PLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELP 249 (332)
Q Consensus 170 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (332)
. .......|+..|+|||++.+ ..++.++|+||||+++|+|++|..||...........+........
T Consensus 155 ~-~~~~~~~g~~~y~aPE~~~~-~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~----------- 221 (285)
T cd05631 155 G-ETVRGRVGTVGYMAPEVINN-EKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKEDQ----------- 221 (285)
T ss_pred C-CeecCCCCCCCccCHhhhcC-CCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhhccc-----------
Confidence 2 22334578999999999986 6789999999999999999999999987654333333322211110
Q ss_pred cccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCC-----HHHHhcCCCCCCCCCCCCCCC--CC
Q 035861 250 GAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRIT-----VDDALNHYWFHEVPLPKSKDF--MP 322 (332)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps-----~~ell~hp~f~~~~~~~~~~~--~~ 322 (332)
......++.++.+||++||+.||.+||+ ++++++||||.++++...... .+
T Consensus 222 ----------------------~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~ 279 (285)
T cd05631 222 ----------------------EEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQHPIFKNINFKRLEANMLEP 279 (285)
T ss_pred ----------------------ccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcCHhhcCCCHHHHHhCcCCc
Confidence 1112237889999999999999999997 899999999999998777554 55
Q ss_pred CCCCc
Q 035861 323 TFPPQ 327 (332)
Q Consensus 323 ~~~~~ 327 (332)
++.|.
T Consensus 280 ~~~~~ 284 (285)
T cd05631 280 PFCPD 284 (285)
T ss_pred CCCCC
Confidence 77664
No 42
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=1.1e-48 Score=343.13 Aligned_cols=269 Identities=29% Similarity=0.444 Sum_probs=214.8
Q ss_pred ccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCCeEEEEc
Q 035861 17 NKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHDSVYMVM 96 (332)
Q Consensus 17 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~lv~ 96 (332)
+.||+|+||.||++.+..+++.||+|++.......... ...+.+|+.+++.+.||||+.+++.+. .....++||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~-----~~~~~~E~~~l~~l~hp~iv~~~~~~~-~~~~~~lv~ 74 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDE-----VAHTLTESRVLKNTRHPFLTSLKYSFQ-TKDRLCFVM 74 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhH-----HHHHHHHHHHHHhCCCCCCcceEEEEE-cCCEEEEEE
Confidence 36899999999999999999999999997643222111 124568999999999999999999884 447899999
Q ss_pred ccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCCCCCCCcc
Q 035861 97 EYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTS 176 (332)
Q Consensus 97 e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~~~~~~~~ 176 (332)
||++|+.+.........+++..+..++.||+.||+|||++||+|+||||+||+++.++.++|+|||++............
T Consensus 75 Ey~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~ 154 (328)
T cd05593 75 EYVNGGELFFHLSRERVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAATMKT 154 (328)
T ss_pred eCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEECCCCcEEEecCcCCccCCCccccccc
Confidence 99997655555555678999999999999999999999999999999999999999999999999998754332233344
Q ss_pred ccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCCcccccccc
Q 035861 177 LVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGAKANFA 256 (332)
Q Consensus 177 ~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (332)
..|++.|+|||.+.+ ..++.++|+||||+++|+|++|..||...+.......+.....
T Consensus 155 ~~gt~~y~aPE~~~~-~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~~~~~~--------------------- 212 (328)
T cd05593 155 FCGTPEYLAPEVLED-NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEDI--------------------- 212 (328)
T ss_pred ccCCcCccChhhhcC-CCCCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHhccCCc---------------------
Confidence 578999999999876 6689999999999999999999999987766554443322110
Q ss_pred CCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCC-----CHHHHhcCCCCCCCCCCCC--CCCCCCCCCccc
Q 035861 257 KQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRI-----TVDDALNHYWFHEVPLPKS--KDFMPTFPPQHA 329 (332)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp-----s~~ell~hp~f~~~~~~~~--~~~~~~~~~~~~ 329 (332)
..+..++.++.+||.+||+.||++|+ ++.++++||||....+... ....+++.|+.+
T Consensus 213 ----------------~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (328)
T cd05593 213 ----------------KFPRTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRHSFFTGVNWQDVYDKKLVPPFKPQVT 276 (328)
T ss_pred ----------------cCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcCCCcCCCCHHHHHhCCCCCCcCCcCC
Confidence 11223788999999999999999997 8999999999998776543 223444444443
No 43
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=2.8e-48 Score=339.59 Aligned_cols=268 Identities=27% Similarity=0.432 Sum_probs=214.6
Q ss_pred ccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhC-CCCCeeeeeeeEEcCCCeEEEE
Q 035861 17 NKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSF-DHPSIVNVKEVVMDDHDSVYMV 95 (332)
Q Consensus 17 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~lv 95 (332)
+.||+|+||+||+|++..+++.||+|++.......... ...+..|..++..+ .||||+++++.+ .+....|+|
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~-----~~~~~~e~~~l~~~~~h~~iv~~~~~~-~~~~~~~iv 74 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDD-----VECTMTEKRILSLARNHPFLTQLYCCF-QTPDRLFFV 74 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccH-----HHHHHHHHHHHHhccCCCchhceeeEE-EcCCEEEEE
Confidence 46899999999999999999999999997643221111 11345777887766 799999999998 444789999
Q ss_pred cccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCCCCCCCc
Q 035861 96 MEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYT 175 (332)
Q Consensus 96 ~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~~~~~~~ 175 (332)
|||++|+.+.........+++..+..++.|++.||+|||++|++||||||+||+++.++.++|+|||++...........
T Consensus 75 ~Ey~~~g~L~~~i~~~~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~~~~ 154 (320)
T cd05590 75 MEFVNGGDLMFHIQKSRRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKTTS 154 (320)
T ss_pred EcCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCCccc
Confidence 99999765555555567899999999999999999999999999999999999999999999999999875433333334
Q ss_pred cccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCCccccccc
Q 035861 176 SLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGAKANF 255 (332)
Q Consensus 176 ~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (332)
...|++.|+|||.+.+ ..++.++|+||||+++|+|++|..||...+..+....+......
T Consensus 155 ~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~------------------- 214 (320)
T cd05590 155 TFCGTPDYIAPEILQE-MLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVV------------------- 214 (320)
T ss_pred ccccCccccCHHHHcC-CCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCCCC-------------------
Confidence 5678999999999876 67899999999999999999999999988877666655432111
Q ss_pred cCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCH------HHHhcCCCCCCCCCCCC--CCCCCCCCCc
Q 035861 256 AKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITV------DDALNHYWFHEVPLPKS--KDFMPTFPPQ 327 (332)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~------~ell~hp~f~~~~~~~~--~~~~~~~~~~ 327 (332)
.+..++.++.+||++||+.||.+|+++ +++++||||..+.+... +...+++.|.
T Consensus 215 ------------------~~~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~h~~f~~~~~~~~~~~~~~~~~~~~ 276 (320)
T cd05590 215 ------------------YPTWLSQDAVDILKAFMTKNPTMRLGSLTLGGEEAILRHPFFKELDWEKLNRRQIEPPFRPR 276 (320)
T ss_pred ------------------CCCCCCHHHHHHHHHHcccCHHHCCCCCCCCCHHHHHcCCCcCCCCHHHHHhCCCCCCcCCC
Confidence 112268899999999999999999998 99999999999876543 2233444444
Q ss_pred c
Q 035861 328 H 328 (332)
Q Consensus 328 ~ 328 (332)
.
T Consensus 277 ~ 277 (320)
T cd05590 277 I 277 (320)
T ss_pred C
Confidence 3
No 44
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=3.9e-48 Score=339.39 Aligned_cols=262 Identities=27% Similarity=0.408 Sum_probs=212.3
Q ss_pred cccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCC-CeeeeeeeEEcCCC
Q 035861 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHP-SIVNVKEVVMDDHD 90 (332)
Q Consensus 12 ~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~-~i~~~~~~~~~~~~ 90 (332)
+|++++.||+|+||.||+|++..+++.||+|++.......... ...+..|..++..+.|+ +|+.+++.+ .+..
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~-----~~~~~~e~~~l~~~~~~~~i~~~~~~~-~~~~ 74 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDD-----VECTMVEKRVLALPGKPPFLTQLHSCF-QTMD 74 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhH-----HHHHHHHHHHHHhcCCCCceeeeEEEE-EcCC
Confidence 5899999999999999999999999999999997643221111 12456788888888765 577777777 4457
Q ss_pred eEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCCC
Q 035861 91 SVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSP 170 (332)
Q Consensus 91 ~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~~ 170 (332)
..|+||||++|+.+.........+++..+..++.||+.||+|||++||+|+||||+||+++.++.++|+|||++......
T Consensus 75 ~~~lv~E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~ 154 (324)
T cd05587 75 RLYFVMEYVNGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFG 154 (324)
T ss_pred EEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEcCCCCEEEeecCcceecCCC
Confidence 89999999987655545444678999999999999999999999999999999999999999999999999988654322
Q ss_pred CCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCCcc
Q 035861 171 LKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPG 250 (332)
Q Consensus 171 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (332)
........|+..|+|||++.+ ..++.++|+||||+++|+|++|..||...+..+....+......
T Consensus 155 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~~~-------------- 219 (324)
T cd05587 155 GKTTRTFCGTPDYIAPEIIAY-QPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVS-------------- 219 (324)
T ss_pred CCceeeecCCccccChhhhcC-CCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCC--------------
Confidence 233345578999999999987 66899999999999999999999999888776666555432111
Q ss_pred ccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCH-----HHHhcCCCCCCCCCCCC
Q 035861 251 AKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITV-----DDALNHYWFHEVPLPKS 317 (332)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~-----~ell~hp~f~~~~~~~~ 317 (332)
.+..++.++.+|+.+||..||.+|+++ +++++||||..+.+...
T Consensus 220 -----------------------~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~hp~~~~~~~~~~ 268 (324)
T cd05587 220 -----------------------YPKSLSKEAVSICKGLLTKHPAKRLGCGPTGERDIREHAFFRRIDWEKL 268 (324)
T ss_pred -----------------------CCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCCcCCCCHHHH
Confidence 112378899999999999999999976 89999999999876544
No 45
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=1.6e-47 Score=329.74 Aligned_cols=283 Identities=47% Similarity=0.901 Sum_probs=224.4
Q ss_pred cccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCCe
Q 035861 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHDS 91 (332)
Q Consensus 12 ~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 91 (332)
+|++++.||.|++|.||+|.+..++..||+|++........ ....+.+|+.++++++|||++++++.+.. +..
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~------~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~ 73 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEG------VPSTAIREISLLKELQHPNIVCLQDVLMQ-ESR 73 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCC------chHHHHHHHHHHHhcCCCCEeeeEEEEee-CCe
Confidence 58899999999999999999998999999999865432211 11245689999999999999999999854 478
Q ss_pred EEEEcccccccHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCC
Q 035861 92 VYMVMEYMEHDLKWLMESMK--QPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGS 169 (332)
Q Consensus 92 ~~lv~e~~~~~l~~~~~~~~--~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~ 169 (332)
.++||||+++++.+.+.... ..+++..++.++.||+.||+|||+.|++|+||+|+||+++.++.++|+|||.+.....
T Consensus 74 ~~~v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~ 153 (285)
T cd07861 74 LYLIFEFLSMDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGI 153 (285)
T ss_pred EEEEEecCCCCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEcCCCcEEECcccceeecCC
Confidence 99999999988877665433 5689999999999999999999999999999999999999999999999999876544
Q ss_pred CCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCCc
Q 035861 170 PLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELP 249 (332)
Q Consensus 170 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (332)
.........++..|+|||.+.+...++.++|+||||+++|++++|..||...........+....+.+....++......
T Consensus 154 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (285)
T cd07861 154 PVRVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLP 233 (285)
T ss_pred CcccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhH
Confidence 43333444668889999998775667899999999999999999999999888777777776666555555554443332
Q ss_pred cccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCC
Q 035861 250 GAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWF 309 (332)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f 309 (332)
............ ........+++++++||.+||+.||++||++.+|++||||
T Consensus 234 ~~~~~~~~~~~~--------~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~~~~ 285 (285)
T cd07861 234 DYKNTFPKWKKG--------SLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNHPYF 285 (285)
T ss_pred HHHhhccccCcc--------hhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcCCCC
Confidence 221111110000 0011123378999999999999999999999999999998
No 46
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=5.2e-48 Score=343.63 Aligned_cols=269 Identities=25% Similarity=0.350 Sum_probs=214.7
Q ss_pred hcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCC
Q 035861 11 FEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHD 90 (332)
Q Consensus 11 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 90 (332)
++|++++.||+|+||+||++.+..+++.||+|++.......... ...+..|+.++.+++|++|+++++.+. +..
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~-----~~~~~~E~~il~~~~~~~iv~~~~~~~-~~~ 74 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQ-----VGHIRAERDILVEADSLWVVKMFYSFQ-DKL 74 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhH-----HHHHHHHHHHHHhCCCCCcceEEEEEe-cCC
Confidence 47999999999999999999999999999999997543211111 124568999999999999999999984 447
Q ss_pred eEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCCC
Q 035861 91 SVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSP 170 (332)
Q Consensus 91 ~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~~ 170 (332)
..|+||||++|+.+.......+.+++..+..++.|++.||+|||++||+||||||+||+++.++.++|+|||++......
T Consensus 75 ~~~lv~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~ 154 (363)
T cd05628 75 NLYLIMEFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKA 154 (363)
T ss_pred eEEEEEcCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCCEEEeeccCccccccc
Confidence 89999999987655555555778999999999999999999999999999999999999999999999999998654211
Q ss_pred CC-----------------------------------CCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCC
Q 035861 171 LK-----------------------------------PYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKK 215 (332)
Q Consensus 171 ~~-----------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~ 215 (332)
.. ......||+.|+|||++.+ ..++.++|+||||+++|+|++|.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~-~~~~~~~DvwSlGvil~ell~G~ 233 (363)
T cd05628 155 HRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQ-TGYNKLCDWWSLGVIMYEMLIGY 233 (363)
T ss_pred ccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcC-CCCCCchhhhhhHHHHHHHHhCC
Confidence 00 0123478999999999987 67889999999999999999999
Q ss_pred CCCCCCChHHHHHHHHHHcCCCCCCcccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCC
Q 035861 216 PLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPE 295 (332)
Q Consensus 216 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~ 295 (332)
.||...+..+...++....... ..+....+++++++||.+|+. +|.
T Consensus 234 ~Pf~~~~~~~~~~~i~~~~~~~---------------------------------~~p~~~~~s~~~~~li~~l~~-~~~ 279 (363)
T cd05628 234 PPFCSETPQETYKKVMNWKETL---------------------------------IFPPEVPISEKAKDLILRFCC-EWE 279 (363)
T ss_pred CCCCCCCHHHHHHHHHcCcCcc---------------------------------cCCCcCCCCHHHHHHHHHHcC-Chh
Confidence 9999887777666665421100 011112268899999999775 444
Q ss_pred ---CCCCHHHHhcCCCCCCCCCCCCCCC
Q 035861 296 ---KRITVDDALNHYWFHEVPLPKSKDF 320 (332)
Q Consensus 296 ---~Rps~~ell~hp~f~~~~~~~~~~~ 320 (332)
.||+++||++||||+.+.+......
T Consensus 280 ~r~~r~~~~ei~~hp~f~~~~~~~~~~~ 307 (363)
T cd05628 280 HRIGAPGVEEIKTNPFFEGVDWEHIRER 307 (363)
T ss_pred hcCCCCCHHHHhCCCCCCCCCHHHHHhC
Confidence 4689999999999999887666443
No 47
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=1.3e-47 Score=330.24 Aligned_cols=283 Identities=44% Similarity=0.789 Sum_probs=222.4
Q ss_pred cccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCCe
Q 035861 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHDS 91 (332)
Q Consensus 12 ~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 91 (332)
+|++.+.||.|++|.||+|.+..+|+.+++|.+........ ....+.+|+..+++++|+|++++++.+.+ ...
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~------~~~~~~~ei~~l~~l~h~~i~~~~~~~~~-~~~ 73 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEG------VPSSALREICLLKELKHKNIVRLYDVLHS-DKK 73 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeeccccccc------CccchhHHHHHHHhcCCCCeeeHHHHhcc-CCc
Confidence 58899999999999999999999999999999975432211 12245689999999999999999999854 478
Q ss_pred EEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCCCC
Q 035861 92 VYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPL 171 (332)
Q Consensus 92 ~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~~~ 171 (332)
.++++||+++++.+.+....+.+++..++.++.||+.||.|||+.|++|+||+|+||+++.++.++|+|||.+.......
T Consensus 74 ~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~ 153 (284)
T cd07839 74 LTLVFEYCDQDLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPV 153 (284)
T ss_pred eEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEcCCCcEEECccchhhccCCCC
Confidence 99999999999888877767789999999999999999999999999999999999999999999999999988665443
Q ss_pred CCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCC-CCCChHHHHHHHHHHcCCCCCCcccCCCCCcc
Q 035861 172 KPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLF-SGTTEVDQIDKIFKTLGTPTETIWPGLSELPG 250 (332)
Q Consensus 172 ~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (332)
.......++..|+|||.+.+...++.++|+||||+++|+|++|..|+ ...+..+....+.+..+.+....++.+...+.
T Consensus 154 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (284)
T cd07839 154 RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPD 233 (284)
T ss_pred CCcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhccc
Confidence 44445567889999999887566799999999999999999998885 44555556666666655555444433322221
Q ss_pred ccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCC
Q 035861 251 AKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWF 309 (332)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f 309 (332)
..... ...... ......+.+++++++||.+||+.||.+|||++++++||||
T Consensus 234 ~~~~~-~~~~~~-------~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h~~f 284 (284)
T cd07839 234 YKPYP-MYPATT-------SLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQHPYF 284 (284)
T ss_pred ccccC-CCCCcc-------hhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcCCCC
Confidence 10000 000000 0011123478999999999999999999999999999998
No 48
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=5.2e-50 Score=314.63 Aligned_cols=264 Identities=26% Similarity=0.416 Sum_probs=226.1
Q ss_pred ccchhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEE
Q 035861 7 CRSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVM 86 (332)
Q Consensus 7 ~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~ 86 (332)
...-++|++-+.||+|.|+.|+++.+..||+.+++|++......... ...+.+|+.+-+.|+||||+.+...+
T Consensus 7 ~~f~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~------~e~l~rEarIC~~LqHP~IvrL~~ti- 79 (355)
T KOG0033|consen 7 TKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARD------FQKLEREARICRKLQHPNIVRLHDSI- 79 (355)
T ss_pred cccchhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhcccc------HHHHHHHHHHHHhcCCCcEeehhhhh-
Confidence 44567999999999999999999999999999999999765544331 12567899999999999999999998
Q ss_pred cCCCeEEEEccccccc-HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcC---CCcEEEeecc
Q 035861 87 DDHDSVYMVMEYMEHD-LKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNN---QGVLKICDFG 162 (332)
Q Consensus 87 ~~~~~~~lv~e~~~~~-l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~---~~~~~l~df~ 162 (332)
++..+.|+|+|.++|+ +...+.. ..-++|..+-..+.||++||.|+|.+||+|+|+||.|+++-. ..-+||+|||
T Consensus 80 ~~~~~~ylvFe~m~G~dl~~eIV~-R~~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK~~~A~vKL~~FG 158 (355)
T KOG0033|consen 80 QEESFHYLVFDLVTGGELFEDIVA-REFYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASKAKGAAVKLADFG 158 (355)
T ss_pred cccceeEEEEecccchHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeeccCCCceeecccc
Confidence 5558999999999985 4444444 366899999999999999999999999999999999999953 3469999999
Q ss_pred cccccCCCCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcc
Q 035861 163 MSRQYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIW 242 (332)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 242 (332)
.+.... ......+..|++.|+|||++.. .+++.++|||+-|+++|-++.|.+||.+.+....+++|+.+.-..+..
T Consensus 159 vAi~l~-~g~~~~G~~GtP~fmaPEvvrk-dpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~yd~~~~-- 234 (355)
T KOG0033|consen 159 LAIEVN-DGEAWHGFAGTPGYLSPEVLKK-DPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGAYDYPSP-- 234 (355)
T ss_pred eEEEeC-CccccccccCCCcccCHHHhhc-CCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhccccCCCCc--
Confidence 999886 4455667789999999999987 789999999999999999999999999988888999988764333322
Q ss_pred cCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCC
Q 035861 243 PGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVP 313 (332)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~ 313 (332)
.++.+++++++||++||..||.+|+|+.|.|+|||+.+-.
T Consensus 235 -------------------------------~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~HpWi~~r~ 274 (355)
T KOG0033|consen 235 -------------------------------EWDTVTPEAKSLIRRMLTVNPKKRITADEALKHPWICNRE 274 (355)
T ss_pred -------------------------------ccCcCCHHHHHHHHHHhccChhhhccHHHHhCCchhcchH
Confidence 2344899999999999999999999999999999998744
No 49
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=1.5e-48 Score=345.94 Aligned_cols=276 Identities=29% Similarity=0.469 Sum_probs=223.2
Q ss_pred hcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCC
Q 035861 11 FEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHD 90 (332)
Q Consensus 11 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 90 (332)
++|++.+.||+|+||+||+|++..+++.||||++......... ....+..|+.++..+.|+||+++++.+. +..
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~-----~~~~~~~e~~~l~~~~~~~i~~~~~~~~-~~~ 74 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRN-----QIAHVRAERDILADADSPWIVKLYYSFQ-DEE 74 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhcc-----HHHHHHHHHHHHHhcCCCCccchhhhee-cCC
Confidence 4799999999999999999999999999999999764322211 1124568999999999999999999884 457
Q ss_pred eEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCCC
Q 035861 91 SVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSP 170 (332)
Q Consensus 91 ~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~~ 170 (332)
..++||||++|+.+.......+.+++..++.++.||+.||+|||++|++|+||||+||+++.++.++|+|||++......
T Consensus 75 ~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~ 154 (350)
T cd05573 75 HLYLVMEYMPGGDLMNLLIRKDVFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKA 154 (350)
T ss_pred eEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEeecCCCCccCccc
Confidence 89999999986544444444578999999999999999999999999999999999999999999999999998765433
Q ss_pred C-----------------------------CCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCC
Q 035861 171 L-----------------------------KPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGT 221 (332)
Q Consensus 171 ~-----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~ 221 (332)
. .......|++.|+|||.+.+ ..++.++||||||+++|+|++|..||...
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~ell~g~~Pf~~~ 233 (350)
T cd05573 155 KDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRG-TPYGLECDWWSLGVILYEMLYGFPPFYSD 233 (350)
T ss_pred CcccccccccccccccccccccccccccccccccccccCccccCHHHHcC-CCCCCceeeEecchhhhhhccCCCCCCCC
Confidence 2 12334568999999999987 57899999999999999999999999988
Q ss_pred ChHHHHHHHHHHcCCCCCCcccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCC-H
Q 035861 222 TEVDQIDKIFKTLGTPTETIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRIT-V 300 (332)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps-~ 300 (332)
+......++...... ...+....+++++.+||.+||. ||.+|++ +
T Consensus 234 ~~~~~~~~i~~~~~~---------------------------------~~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~ 279 (350)
T cd05573 234 TLQETYNKIINWKES---------------------------------LRFPPDPPVSPEAIDLICRLLC-DPEDRLGSF 279 (350)
T ss_pred CHHHHHHHHhccCCc---------------------------------ccCCCCCCCCHHHHHHHHHHcc-ChhhcCCCH
Confidence 876666655442110 0111122268999999999998 9999999 9
Q ss_pred HHHhcCCCCCCCCCCCCCCCCCCCCCc
Q 035861 301 DDALNHYWFHEVPLPKSKDFMPTFPPQ 327 (332)
Q Consensus 301 ~ell~hp~f~~~~~~~~~~~~~~~~~~ 327 (332)
+++++||||.++.+.......++..|.
T Consensus 280 ~~ll~hp~~~~~~~~~~~~~~~~~~~~ 306 (350)
T cd05573 280 EEIKSHPFFKGIDWENLRETKPPFVPE 306 (350)
T ss_pred HHHhcCCCcCCCCHHHHhhCCCCcCCC
Confidence 999999999999877666555554443
No 50
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=2.3e-47 Score=329.65 Aligned_cols=281 Identities=41% Similarity=0.747 Sum_probs=217.4
Q ss_pred hcccccccccccCcEEEEEEEECC-CCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhC---CCCCeeeeeeeEE
Q 035861 11 FEFEKLNKISEGTYGIVYRARDKK-SGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSF---DHPSIVNVKEVVM 86 (332)
Q Consensus 11 ~~y~~~~~lg~g~~g~v~~~~~~~-~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l---~h~~i~~~~~~~~ 86 (332)
.+|++++.||+|+||+||+|.+.. ++..||+|++......... ...+.+|+..++.+ .||||+++++++.
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~------~~~~~~e~~~l~~l~~~~hpniv~~~~~~~ 74 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGM------PLSTIREVAVLRHLETFEHPNVVRLFDVCT 74 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCc------hHHHHHHHHHHHhhcccCCCCcceEEEEEe
Confidence 379999999999999999999854 4678999998754332211 11344677666655 6999999999874
Q ss_pred c----CCCeEEEEcccccccHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeec
Q 035861 87 D----DHDSVYMVMEYMEHDLKWLMESM-KQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDF 161 (332)
Q Consensus 87 ~----~~~~~~lv~e~~~~~l~~~~~~~-~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df 161 (332)
. .....++|+|++++++.+.+... ...+++..++.++.|++.||+|||++|++|+||||+||+++.++.++|+||
T Consensus 75 ~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~~~~~~kl~Df 154 (290)
T cd07862 75 VSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADF 154 (290)
T ss_pred cccCCCCCcEEEEEccCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEcCCCCEEEccc
Confidence 2 34568999999999887777654 345899999999999999999999999999999999999999999999999
Q ss_pred ccccccCCCCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCc
Q 035861 162 GMSRQYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETI 241 (332)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 241 (332)
|.+...... .......++..|+|||.+.. ..++.++|+||||+++|+|++|..||...+..+....+....+.+....
T Consensus 155 g~~~~~~~~-~~~~~~~~~~~y~aPE~~~~-~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~ 232 (290)
T cd07862 155 GLARIYSFQ-MALTSVVVTLWYRAPEVLLQ-SSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEED 232 (290)
T ss_pred cceEeccCC-cccccccccccccChHHHhC-CCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhh
Confidence 998765432 22345568999999999876 6789999999999999999999999999988888888887766555443
Q ss_pred ccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCC
Q 035861 242 WPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWF 309 (332)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f 309 (332)
++.....+... ....... ......+.++..+++|+.+||+.||++||++.|+|+||||
T Consensus 233 ~~~~~~~~~~~--~~~~~~~--------~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~hp~f 290 (290)
T cd07862 233 WPRDVALPRQA--FHSKSAQ--------PIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYF 290 (290)
T ss_pred chhhhcccchh--ccCCCCC--------CHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhcCCCC
Confidence 33221111100 0000000 0011123478899999999999999999999999999998
No 51
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=3e-48 Score=345.70 Aligned_cols=276 Identities=28% Similarity=0.427 Sum_probs=219.1
Q ss_pred hcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCC
Q 035861 11 FEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHD 90 (332)
Q Consensus 11 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 90 (332)
++|++++.||.|+||+||++++..+++.||||++.......... ...+.+|+.+++.++|+||+.+++.+. +..
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~-----~~~~~~E~~il~~l~h~~iv~~~~~~~-~~~ 74 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQ-----VAHVRAERDILAEADNPWVVKLYYSFQ-DEN 74 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhH-----HHHHHHHHHHHHhCCCCCCcceEEEEE-cCC
Confidence 47999999999999999999999999999999997643211111 123567999999999999999999984 458
Q ss_pred eEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCCC
Q 035861 91 SVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSP 170 (332)
Q Consensus 91 ~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~~ 170 (332)
..|+||||++|+.+.......+.+++..+..++.||+.||+|||++|++|+||||+||+++.++.++|+|||++......
T Consensus 75 ~~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 154 (364)
T cd05599 75 YLYLIMEYLPGGDMMTLLMKKDTFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKS 154 (364)
T ss_pred eEEEEECCCCCcHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEeecccceecccc
Confidence 89999999987665555555678999999999999999999999999999999999999999999999999988654211
Q ss_pred CC--------------------------------------CCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHH
Q 035861 171 LK--------------------------------------PYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELL 212 (332)
Q Consensus 171 ~~--------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~ll 212 (332)
.. ......||+.|+|||++.. ..++.++|+||||+++|+|+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~el~ 233 (364)
T cd05599 155 HRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQ-TGYNKECDWWSLGVIMYEML 233 (364)
T ss_pred ccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcC-CCCCCeeeeecchhHHHHhh
Confidence 10 0112358999999999876 67899999999999999999
Q ss_pred hCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCC
Q 035861 213 AKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTY 292 (332)
Q Consensus 213 tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~ 292 (332)
+|..||...+.......+...... ........+++++++||.+|+.
T Consensus 234 ~G~~Pf~~~~~~~~~~~i~~~~~~---------------------------------~~~~~~~~~s~~~~~li~~ll~- 279 (364)
T cd05599 234 VGYPPFCSDNPQETYRKIINWKET---------------------------------LQFPDEVPLSPEAKDLIKRLCC- 279 (364)
T ss_pred cCCCCCCCCCHHHHHHHHHcCCCc---------------------------------cCCCCCCCCCHHHHHHHHHHcc-
Confidence 999999988776665555432110 0011111368899999999997
Q ss_pred CCCCCCC---HHHHhcCCCCCCCCCCCCCCCCCCCCCc
Q 035861 293 DPEKRIT---VDDALNHYWFHEVPLPKSKDFMPTFPPQ 327 (332)
Q Consensus 293 dp~~Rps---~~ell~hp~f~~~~~~~~~~~~~~~~~~ 327 (332)
+|.+|++ ++++++||||+.+.+.......+.+.|+
T Consensus 280 ~p~~R~~~~~~~~ll~h~~~~~~~~~~~~~~~~~~~~~ 317 (364)
T cd05599 280 EAERRLGNNGVNEIKSHPFFKGVDWEHIRERPAPIIPE 317 (364)
T ss_pred CHhhcCCCCCHHHHhcCCCcCCCCHHHHhhcCCCCCCC
Confidence 8999998 9999999999998765544444444443
No 52
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=4.7e-48 Score=337.14 Aligned_cols=252 Identities=28% Similarity=0.433 Sum_probs=207.2
Q ss_pred ccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCCeEEEEccc
Q 035861 19 ISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHDSVYMVMEY 98 (332)
Q Consensus 19 lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~lv~e~ 98 (332)
||+|+||+||++.+..+++.||+|++.......... ...+..|+.++++++||||+++++.+. +....++||||
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~-----~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~~lv~e~ 74 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSE-----VTHTLAERTVLAQVNCPFIVPLKFSFQ-SPEKLYLVLAF 74 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhH-----HHHHHHHHHHHHhCCCCcEeceeeEEe-cCCeEEEEEcC
Confidence 799999999999999999999999997543211111 124568999999999999999999884 44789999999
Q ss_pred ccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCCCCCCCcccc
Q 035861 99 MEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLV 178 (332)
Q Consensus 99 ~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~~~~~~~~~~ 178 (332)
++|+.+.......+.+++..+..++.||+.||+|||++||+|+||||+||+++.++.++|+|||++..............
T Consensus 75 ~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 154 (312)
T cd05585 75 INGGELFHHLQREGRFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDDKTNTFC 154 (312)
T ss_pred CCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEECCCCcEEEEECcccccCccCCCcccccc
Confidence 99765544444467899999999999999999999999999999999999999999999999999875433323334557
Q ss_pred ccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCCccccccccCC
Q 035861 179 VTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGAKANFAKQ 258 (332)
Q Consensus 179 ~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (332)
|++.|+|||.+.+ ..++.++|+||||+++|+|++|..||...+.......+.....
T Consensus 155 gt~~y~aPE~~~~-~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~----------------------- 210 (312)
T cd05585 155 GTPEYLAPELLLG-HGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKILQEPL----------------------- 210 (312)
T ss_pred CCcccCCHHHHcC-CCCCCccceechhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCC-----------------------
Confidence 8999999999987 6789999999999999999999999988776665555433211
Q ss_pred chhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCC---CHHHHhcCCCCCCCCC
Q 035861 259 PYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRI---TVDDALNHYWFHEVPL 314 (332)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp---s~~ell~hp~f~~~~~ 314 (332)
..+..+++.+.+||.+||+.||.+|| ++.++++||||.+..+
T Consensus 211 --------------~~~~~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~hp~~~~~~~ 255 (312)
T cd05585 211 --------------RFPDGFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKNHPFFSQLSW 255 (312)
T ss_pred --------------CCCCcCCHHHHHHHHHHcCCCHHHcCCCCCHHHHHcCCCcCCCCH
Confidence 11223788999999999999999997 5899999999998754
No 53
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4.6e-49 Score=308.11 Aligned_cols=261 Identities=30% Similarity=0.450 Sum_probs=230.1
Q ss_pred ccccchhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeee
Q 035861 5 QGCRSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEV 84 (332)
Q Consensus 5 ~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~ 84 (332)
..+..+++|++.+.||.|-||.||+|+.+.++-.||+|++.++.. ...++..++.+|+++-..|+||||++++++
T Consensus 16 ~~~~~l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi-----~~~~v~~qlrREiEIqs~L~hpnilrlY~~ 90 (281)
T KOG0580|consen 16 TKTWTLDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQI-----LKTQVEHQLRREIEIQSHLRHPNILRLYGY 90 (281)
T ss_pred ccccchhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHH-----HHhcchhhhhheeEeecccCCccHHhhhhh
Confidence 456788999999999999999999999999999999999987653 333445578899999999999999999999
Q ss_pred EEcCCCeEEEEccccc-ccHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecc
Q 035861 85 VMDDHDSVYMVMEYME-HDLKWLMES-MKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFG 162 (332)
Q Consensus 85 ~~~~~~~~~lv~e~~~-~~l~~~~~~-~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~ 162 (332)
+.++ ...|+++||.+ |++...+.. ....+++...+.++.|+|.||.|+|..+++||||||+|+|++.++.+|++|||
T Consensus 91 fhd~-~riyLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg~~~~lkiAdfG 169 (281)
T KOG0580|consen 91 FHDS-KRIYLILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLLGSAGELKIADFG 169 (281)
T ss_pred eecc-ceeEEEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhccCCCCCeeccCCC
Confidence 9666 88999999998 456555553 45679999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcc
Q 035861 163 MSRQYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIW 242 (332)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 242 (332)
-+.... ...+.+.+||..|.|||...+ ...+...|+|++|++.||++.|..||......+++.++.+.....+
T Consensus 170 wsV~~p--~~kR~tlcgt~dyl~pEmv~~-~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI~k~~~~~p---- 242 (281)
T KOG0580|consen 170 WSVHAP--SNKRKTLCGTLDYLPPEMVEG-RGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRIRKVDLKFP---- 242 (281)
T ss_pred ceeecC--CCCceeeecccccCCHhhcCC-CCccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHHHHccccCC----
Confidence 987653 455678899999999999987 7789999999999999999999999999999899999877533222
Q ss_pred cCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCC
Q 035861 243 PGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHE 311 (332)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~ 311 (332)
+.++.++++||.+|+.++|.+|.+..|++.|||+..
T Consensus 243 ---------------------------------~~is~~a~dlI~~ll~~~p~~r~~l~~v~~hpwI~a 278 (281)
T KOG0580|consen 243 ---------------------------------STISGGAADLISRLLVKNPIERLALTEVMDHPWIVA 278 (281)
T ss_pred ---------------------------------cccChhHHHHHHHHhccCccccccHHHHhhhHHHHh
Confidence 238999999999999999999999999999999865
No 54
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=1.3e-47 Score=347.95 Aligned_cols=284 Identities=32% Similarity=0.548 Sum_probs=219.9
Q ss_pred hcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcC--
Q 035861 11 FEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDD-- 88 (332)
Q Consensus 11 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-- 88 (332)
.+|++++.||+|+||+||+|.+..+++.||||++..... ...+|+.+++.++|+||+++++++...
T Consensus 66 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~------------~~~~Ei~il~~l~h~niv~l~~~~~~~~~ 133 (440)
T PTZ00036 66 KSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDPQ------------YKNRELLIMKNLNHINIIFLKDYYYTECF 133 (440)
T ss_pred CeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCcc------------hHHHHHHHHHhcCCCCCcceeeeEeeccc
Confidence 479999999999999999999999999999998854321 124799999999999999998876321
Q ss_pred -----CCeEEEEcccccccHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCC-cEEEe
Q 035861 89 -----HDSVYMVMEYMEHDLKWLMES---MKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQG-VLKIC 159 (332)
Q Consensus 89 -----~~~~~lv~e~~~~~l~~~~~~---~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~-~~~l~ 159 (332)
...+++||||+++++.+.+.. ....+++..++.++.||+.||+|||++||+||||||+||+++.++ .+||+
T Consensus 134 ~~~~~~~~l~lvmE~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~~~~~~vkL~ 213 (440)
T PTZ00036 134 KKNEKNIFLNVVMEFIPQTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDPNTHTLKLC 213 (440)
T ss_pred ccCCCceEEEEEEecCCccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEcCCCCceeee
Confidence 235779999999987665543 356799999999999999999999999999999999999999765 79999
Q ss_pred ecccccccCCCCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCC
Q 035861 160 DFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTE 239 (332)
Q Consensus 160 df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~ 239 (332)
|||++...... .......+++.|+|||++.+...++.++|+||||+++|+|++|.+||.+.+..+...++....+.+..
T Consensus 214 DFGla~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~ 292 (440)
T PTZ00036 214 DFGSAKNLLAG-QRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTE 292 (440)
T ss_pred ccccchhccCC-CCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCH
Confidence 99999865432 22234567899999999877567899999999999999999999999998888888888776665543
Q ss_pred CcccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCCCC
Q 035861 240 TIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVPLP 315 (332)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~ 315 (332)
..+..+...- ....+........... .+...+.++++||.+||.+||.+|||+.|+|+||||..+..+
T Consensus 293 ~~~~~~~~~~-~~~~~~~~~~~~l~~~-------~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp~f~~~~~~ 360 (440)
T PTZ00036 293 DQLKEMNPNY-ADIKFPDVKPKDLKKV-------FPKGTPDDAINFISQFLKYEPLKRLNPIEALADPFFDDLRDP 360 (440)
T ss_pred HHHHHhchhh-hcccCCccCchhHHHH-------hccCCCHHHHHHHHHHCCCChhHCcCHHHHhCChhHHhhhcc
Confidence 3222111000 0000000000011111 123367899999999999999999999999999999987654
No 55
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-47 Score=333.25 Aligned_cols=255 Identities=26% Similarity=0.365 Sum_probs=212.3
Q ss_pred chhcccccccccccCcEEEEEEEECCCCcE-EEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEc
Q 035861 9 SVFEFEKLNKISEGTYGIVYRARDKKSGEI-VALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMD 87 (332)
Q Consensus 9 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~-v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~ 87 (332)
...+..+.+.+|.|+||+||+|.+. |.. ||||++......... ...+.+|+.+|.+++||||+.++|++.+
T Consensus 39 ~~~~l~~~~~iG~G~~g~V~~~~~~--g~~~vavK~~~~~~~~~~~------~~~f~~E~~il~~l~HpNIV~f~G~~~~ 110 (362)
T KOG0192|consen 39 DPDELPIEEVLGSGSFGTVYKGKWR--GTDVVAVKIISDPDFDDES------RKAFRREASLLSRLRHPNIVQFYGACTS 110 (362)
T ss_pred ChHHhhhhhhcccCCceeEEEEEeC--CceeEEEEEecchhcChHH------HHHHHHHHHHHHhCCCCCeeeEEEEEcC
Confidence 3556777888999999999999998 556 999999876544433 2367899999999999999999999966
Q ss_pred CCCeEEEEcccccccHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCC-cccccCCCCCEEEcCCC-cEEEeeccc
Q 035861 88 DHDSVYMVMEYMEHDLKWLMESM--KQPFSTSEVKCLMLQLLEGVKYLHDNW-VLHRDLKTSNLLLNNQG-VLKICDFGM 163 (332)
Q Consensus 88 ~~~~~~lv~e~~~~~l~~~~~~~--~~~l~~~~~~~i~~~l~~~L~~lh~~~-i~H~di~p~Nili~~~~-~~~l~df~~ 163 (332)
....++|||||++++++..+... ...++...+..|+.||+.|+.|||+++ |+|+||||+|||++.++ ++||+|||+
T Consensus 111 ~~~~~~iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGl 190 (362)
T KOG0192|consen 111 PPGSLCIVTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVDLKGKTLKIADFGL 190 (362)
T ss_pred CCCceEEEEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEcCCCCEEEECCCcc
Confidence 64479999999997665555443 688999999999999999999999999 99999999999999998 999999999
Q ss_pred ccccCCCCCCCccccccccccchhhhcC-CCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcc
Q 035861 164 SRQYGSPLKPYTSLVVTLWYRAPELLLG-AKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIW 242 (332)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 242 (332)
++.............||..|||||++.+ ...++.++||||+|+++|||+||..||......+....+......+.
T Consensus 191 sr~~~~~~~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~~v~~~~~Rp~---- 266 (362)
T KOG0192|consen 191 SREKVISKTSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQVASAVVVGGLRPP---- 266 (362)
T ss_pred ceeeccccccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCC----
Confidence 9876543334445789999999999995 36899999999999999999999999999888666555554322221
Q ss_pred cCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcC
Q 035861 243 PGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNH 306 (332)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 306 (332)
.+..+++.+..|+.+||..||..||++.+++.-
T Consensus 267 -------------------------------~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~ 299 (362)
T KOG0192|consen 267 -------------------------------IPKECPPHLSSLMERCWLVDPSRRPSFLEIVSR 299 (362)
T ss_pred -------------------------------CCccCCHHHHHHHHHhCCCCCCcCCCHHHHHHH
Confidence 112278899999999999999999999988754
No 56
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=9e-48 Score=336.69 Aligned_cols=257 Identities=27% Similarity=0.400 Sum_probs=210.7
Q ss_pred ccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhC-CCCCeeeeeeeEEcCCCeEEEE
Q 035861 17 NKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSF-DHPSIVNVKEVVMDDHDSVYMV 95 (332)
Q Consensus 17 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~lv 95 (332)
+.||+|+||.||+|++..+++.||+|++........... ..+..|.+++..+ .||+|+.+++.+.. ....|+|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~-----~~~~~e~~il~~~~~hp~i~~~~~~~~~-~~~~~lv 74 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDV-----DCTMTEKRILALAAKHPFLTALHCCFQT-KDRLFFV 74 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHH-----HHHHHHHHHHHhccCCCCccceeeEEEc-CCeEEEE
Confidence 469999999999999999999999999976432221111 1345788888766 89999999999844 4789999
Q ss_pred cccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCCCCCCCc
Q 035861 96 MEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYT 175 (332)
Q Consensus 96 ~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~~~~~~~ 175 (332)
|||++|+.+.........+++..+..++.||+.||+|||++|++|+||||+||+++.++.++|+|||.+...........
T Consensus 75 ~E~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~ 154 (321)
T cd05591 75 MEYVNGGDLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVTTT 154 (321)
T ss_pred EeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeecccceecccCCcccc
Confidence 99999765554444567899999999999999999999999999999999999999999999999999876433333344
Q ss_pred cccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCCccccccc
Q 035861 176 SLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGAKANF 255 (332)
Q Consensus 176 ~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (332)
...|+..|+|||++.+ ..++.++|+||||+++|+|++|..||...+..+....+.......
T Consensus 155 ~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~------------------ 215 (321)
T cd05591 155 TFCGTPDYIAPEILQE-LEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILHDDVLY------------------ 215 (321)
T ss_pred ccccCccccCHHHHcC-CCCCCccceechhHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCC------------------
Confidence 5678999999999876 678999999999999999999999999888777666654422111
Q ss_pred cCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCC-------CHHHHhcCCCCCCCCCCCC
Q 035861 256 AKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRI-------TVDDALNHYWFHEVPLPKS 317 (332)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp-------s~~ell~hp~f~~~~~~~~ 317 (332)
+..++.++.+||.+||+.||++|+ +++++++||||..+.+...
T Consensus 216 -------------------p~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~hp~~~~~~~~~~ 265 (321)
T cd05591 216 -------------------PVWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQHPFFKEIDWVLL 265 (321)
T ss_pred -------------------CCCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcCCccCCCCHHHH
Confidence 112688999999999999999999 9999999999998876544
No 57
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=3.7e-48 Score=339.68 Aligned_cols=268 Identities=28% Similarity=0.428 Sum_probs=214.5
Q ss_pred ccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCCeEEEEc
Q 035861 17 NKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHDSVYMVM 96 (332)
Q Consensus 17 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~lv~ 96 (332)
+.||+|+||+||++.+..+++.||+|++.......... ...+..|+.+++.++||||+.+++.+. .....|+||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~-----~~~~~~e~~~l~~~~hp~i~~~~~~~~-~~~~~~lv~ 74 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDE-----VAHTLTENRVLQNSRHPFLTALKYSFQ-THDRLCFVM 74 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhH-----HHHHHHHHHHHHhCCCCCCCceEEEEE-cCCEEEEEE
Confidence 46899999999999999999999999997643222111 113467889999999999999999884 447899999
Q ss_pred ccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH-CCcccccCCCCCEEEcCCCcEEEeecccccccCCCCCCCc
Q 035861 97 EYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHD-NWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYT 175 (332)
Q Consensus 97 e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~-~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~~~~~~~ 175 (332)
||++|+.+.........+++..+..++.||+.||+|||+ .|++|+||||+||+++.++.++|+|||++...........
T Consensus 75 E~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~ 154 (325)
T cd05594 75 EYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMK 154 (325)
T ss_pred eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEECCCCCEEEecCCCCeecCCCCcccc
Confidence 999987665555556789999999999999999999997 8999999999999999999999999999875433223334
Q ss_pred cccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCCccccccc
Q 035861 176 SLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGAKANF 255 (332)
Q Consensus 176 ~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (332)
...|++.|+|||++.+ ..++.++|+||||+++|+|++|..||...+.......+......
T Consensus 155 ~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~~~~~~------------------- 214 (325)
T cd05594 155 TFCGTPEYLAPEVLED-NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIR------------------- 214 (325)
T ss_pred cccCCcccCCHHHHcc-CCCCCccccccccceeeeeccCCCCCCCCCHHHHHHHHhcCCCC-------------------
Confidence 4578999999999976 67899999999999999999999999887765555444322111
Q ss_pred cCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCC-----CHHHHhcCCCCCCCCCCCCC--CCCCCCCCcc
Q 035861 256 AKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRI-----TVDDALNHYWFHEVPLPKSK--DFMPTFPPQH 328 (332)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp-----s~~ell~hp~f~~~~~~~~~--~~~~~~~~~~ 328 (332)
.+..+++++.+||.+||+.||++|+ ++.++++||||.++.+.... ...+++.|+.
T Consensus 215 ------------------~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~~~~~~~~~~~~~~~~~~~ 276 (325)
T cd05594 215 ------------------FPRTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQHKFFAGIVWQDVYEKKLVPPFKPQV 276 (325)
T ss_pred ------------------CCCCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcCCCcCCCCHHHHHhCCCCCCcCCcC
Confidence 1123788999999999999999997 99999999999987765442 2334444443
No 58
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=4.1e-47 Score=338.22 Aligned_cols=300 Identities=33% Similarity=0.533 Sum_probs=227.4
Q ss_pred chhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcC
Q 035861 9 SVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDD 88 (332)
Q Consensus 9 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 88 (332)
..++|++.+.||+|+||.||++.+..+++.||||++......... ...+.+|+.+++.++||||+.+++++...
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~------~~~~~~E~~~l~~l~h~~ii~~~~~~~~~ 95 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTH------AKRAYRELVLMKCVNHKNIIGLLNVFTPQ 95 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchh------HHHHHHHHHHHHhcCCCCccccceeeccc
Confidence 567999999999999999999999999999999998653221111 12456899999999999999999987433
Q ss_pred C-----CeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeeccc
Q 035861 89 H-----DSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGM 163 (332)
Q Consensus 89 ~-----~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~ 163 (332)
. ...|+||||+++++...+.. .+++..+..++.|++.||+|||++||+|+||||+||+++.++.++|+|||+
T Consensus 96 ~~~~~~~~~~lv~e~~~~~l~~~~~~---~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~ 172 (364)
T cd07875 96 KSLEEFQDVYIVMELMDANLCQVIQM---ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGL 172 (364)
T ss_pred ccccccCeEEEEEeCCCCCHHHHHHh---cCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEECCCCcEEEEeCCC
Confidence 2 45799999999988776643 588999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCccc
Q 035861 164 SRQYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWP 243 (332)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (332)
+...... .......++..|+|||++.+ ..++.++|+||||+++|+|++|..||...+..+....+....+.+......
T Consensus 173 a~~~~~~-~~~~~~~~t~~y~aPE~~~~-~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (364)
T cd07875 173 ARTAGTS-FMMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMK 250 (364)
T ss_pred ccccCCC-CcccCCcccCCcCCHHHHhC-CCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHH
Confidence 9765432 22234568899999999987 678999999999999999999999999998888888887776665544333
Q ss_pred CCCCCccccccc-cCCchhhhhhhCCCC----ccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCCCCCCC
Q 035861 244 GLSELPGAKANF-AKQPYNLLRKRFPAA----SFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVPLPKSK 318 (332)
Q Consensus 244 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~~~~ 318 (332)
.+.......... ............+.. ........+..+++||.+||+.||.+|||++++|+||||..+..+...
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~hp~~~~~~~~~~~ 330 (364)
T cd07875 251 KLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVWYDPSEA 330 (364)
T ss_pred hhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcCcccccccCcccC
Confidence 222110000000 000000000111111 111122246688999999999999999999999999999987666554
Q ss_pred C
Q 035861 319 D 319 (332)
Q Consensus 319 ~ 319 (332)
.
T Consensus 331 ~ 331 (364)
T cd07875 331 E 331 (364)
T ss_pred C
Confidence 4
No 59
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=6.7e-47 Score=327.24 Aligned_cols=291 Identities=76% Similarity=1.275 Sum_probs=234.6
Q ss_pred ccchhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEE
Q 035861 7 CRSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVM 86 (332)
Q Consensus 7 ~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~ 86 (332)
++.+++|++.+.||.|++|.||+|++..+++.+++|.+....... .....+.+|+..+++++||||+++++++.
T Consensus 1 ~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~------~~~~~~~~e~~~l~~l~h~ni~~~~~~~~ 74 (293)
T cd07843 1 CRSVDEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKE------GFPITSLREINILLKLQHPNIVTVKEVVV 74 (293)
T ss_pred CcchhhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccc------cchhhHHHHHHHHHhcCCCCEEEEEEEEE
Confidence 356789999999999999999999999999999999997553321 11224568999999999999999999885
Q ss_pred cCC-CeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeeccccc
Q 035861 87 DDH-DSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSR 165 (332)
Q Consensus 87 ~~~-~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~ 165 (332)
.+. ...|+|+||+++++.+.+......+++..++.++.|++.||+|||+.|++|+||+|+||+++.++.++|+|||.+.
T Consensus 75 ~~~~~~~~lv~e~~~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~~l~d~g~~~ 154 (293)
T cd07843 75 GSNLDKIYMVMEYVEHDLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLNNRGILKICDFGLAR 154 (293)
T ss_pred ecCCCcEEEEehhcCcCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCcEEEeecCcee
Confidence 442 7799999999998878777656679999999999999999999999999999999999999999999999999988
Q ss_pred ccCCCCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCC
Q 035861 166 QYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGL 245 (332)
Q Consensus 166 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (332)
.............++..|+|||.+.+...++.++|+||||+++|+|++|..||......+...++....+.+....++.+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (293)
T cd07843 155 EYGSPLKPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGF 234 (293)
T ss_pred eccCCccccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHh
Confidence 76554344445567888999999876556789999999999999999999999998888888888877777766666655
Q ss_pred CCCcccc-ccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCC
Q 035861 246 SELPGAK-ANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWF 309 (332)
Q Consensus 246 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f 309 (332)
..++... ..............++. ..++..+.+||.+||+.+|++||++.|+|+||||
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~li~~~l~~~p~~R~t~~ell~~~~f 293 (293)
T cd07843 235 SELPGAKKKTFTKYPYNQLRKKFPA------LSLSDNGFDLLNRLLTYDPAKRISAEDALKHPYF 293 (293)
T ss_pred hccchhcccccccccchhhhccccc------cCCChHHHHHHHHHhccCccccCCHHHHhcCCCC
Confidence 4433322 11111111111111111 1158889999999999999999999999999998
No 60
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=2.5e-47 Score=338.95 Aligned_cols=298 Identities=34% Similarity=0.544 Sum_probs=223.0
Q ss_pred cchhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEc
Q 035861 8 RSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMD 87 (332)
Q Consensus 8 ~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~ 87 (332)
..+++|++.+.||+|+||.||++.+..++..||+|++......... ...+.+|+.+++.++||||+++++++..
T Consensus 18 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~------~~~~~~E~~~l~~l~h~niv~~~~~~~~ 91 (359)
T cd07876 18 TVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTH------AKRAYRELVLLKCVNHKNIISLLNVFTP 91 (359)
T ss_pred hhhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhH------HHHHHHHHHHHHhCCCCCEeeeeeeecc
Confidence 3568999999999999999999999999999999998654221111 1245689999999999999999998854
Q ss_pred CC-----CeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecc
Q 035861 88 DH-----DSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFG 162 (332)
Q Consensus 88 ~~-----~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~ 162 (332)
.. ...|+||||+++++...+. ..+++..+..++.|++.||+|||++||+|+||||+||+++.++.++|+|||
T Consensus 92 ~~~~~~~~~~~lv~e~~~~~l~~~~~---~~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~~~~~~~kl~Dfg 168 (359)
T cd07876 92 QKSLEEFQDVYLVMELMDANLCQVIH---MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG 168 (359)
T ss_pred CCCccccceeEEEEeCCCcCHHHHHh---ccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEecCC
Confidence 32 3579999999998876653 358999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcc
Q 035861 163 MSRQYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIW 242 (332)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 242 (332)
.+...... .......++..|+|||.+.+ ..++.++|+||||+++|+|++|..||...+..+....+....+.+.....
T Consensus 169 ~a~~~~~~-~~~~~~~~t~~y~aPE~~~~-~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 246 (359)
T cd07876 169 LARTACTN-FMMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFM 246 (359)
T ss_pred CccccccC-ccCCCCcccCCCCCchhccC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHH
Confidence 98754322 22234567899999999977 67899999999999999999999999988877777766666555443322
Q ss_pred cCCCCCccc-cccccCCchhhhhhhCCC----CccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCCCCC
Q 035861 243 PGLSELPGA-KANFAKQPYNLLRKRFPA----ASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVPLPK 316 (332)
Q Consensus 243 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~~ 316 (332)
..+...... ................+. .........++.+++||.+||..||++|||+.|+|+||||+.+..+.
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~~~~~ 325 (359)
T cd07876 247 NRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHPYITVWYDPA 325 (359)
T ss_pred HHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcCchhhhhcCcc
Confidence 111100000 000000000000000111 01112223578899999999999999999999999999999765544
No 61
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=1.5e-47 Score=335.64 Aligned_cols=258 Identities=30% Similarity=0.444 Sum_probs=209.8
Q ss_pred ccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHH---hhCCCCCeeeeeeeEEcCC
Q 035861 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINIL---LSFDHPSIVNVKEVVMDDH 89 (332)
Q Consensus 13 y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l---~~l~h~~i~~~~~~~~~~~ 89 (332)
|++++.||+|++|.||+|.+..+++.||||++........... ..+..|+.++ +.++||||+++++.+. ..
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~-----~~l~~e~~~~~~~~~l~hp~i~~~~~~~~-~~ 74 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEV-----ESLMCEKRIFETANSERHPFLVNLFACFQ-TE 74 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHH-----HHHHHHHHHHHhccccCCCChhceeeEEE-cC
Confidence 7789999999999999999999999999999975432111111 1344555544 5668999999999884 44
Q ss_pred CeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCC
Q 035861 90 DSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGS 169 (332)
Q Consensus 90 ~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~ 169 (332)
...|+||||++|+.+..... .+.+++..+..++.||+.||+|||+.|++|+||||+||+++.++.++|+|||++.....
T Consensus 75 ~~~~lv~E~~~~~~L~~~~~-~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~ 153 (324)
T cd05589 75 DHVCFVMEYAAGGDLMMHIH-TDVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMG 153 (324)
T ss_pred CEEEEEEcCCCCCcHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCcEEeCcccCCccCCC
Confidence 78999999999866555443 46799999999999999999999999999999999999999999999999998875433
Q ss_pred CCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCCc
Q 035861 170 PLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELP 249 (332)
Q Consensus 170 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (332)
.........|+..|+|||.+.+ ..++.++|+||||+++|+|++|..||...+..+....+......
T Consensus 154 ~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~~~------------- 219 (324)
T cd05589 154 FGDRTSTFCGTPEFLAPEVLTE-TSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVNDEVR------------- 219 (324)
T ss_pred CCCcccccccCccccCHhHhcC-CCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC-------------
Confidence 2233345678999999999877 67899999999999999999999999988776666555432111
Q ss_pred cccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCC-----CHHHHhcCCCCCCCCCC
Q 035861 250 GAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRI-----TVDDALNHYWFHEVPLP 315 (332)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp-----s~~ell~hp~f~~~~~~ 315 (332)
.+..++..+.+||.+||+.||.+|| ++.++++||||.++.+.
T Consensus 220 ------------------------~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~~~f~~~~~~ 266 (324)
T cd05589 220 ------------------------YPRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQPFFRDINWD 266 (324)
T ss_pred ------------------------CCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhCCCcCCCCHH
Confidence 1123788899999999999999999 79999999999987644
No 62
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.5e-49 Score=314.60 Aligned_cols=273 Identities=31% Similarity=0.460 Sum_probs=231.0
Q ss_pred hhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhC-CCCCeeeeeeeEEcC
Q 035861 10 VFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSF-DHPSIVNVKEVVMDD 88 (332)
Q Consensus 10 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~ 88 (332)
...|.-.+.+|.|..++|-++.++.+|..+++|++...........-.+....-..|+.+|+++ .||+|+.+.+++ +.
T Consensus 16 y~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~y-es 94 (411)
T KOG0599|consen 16 YAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVY-ES 94 (411)
T ss_pred HhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeec-cC
Confidence 4678899999999999999999999999999999987655443322333334556899999998 899999999999 55
Q ss_pred CCeEEEEccccc-ccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeeccccccc
Q 035861 89 HDSVYMVMEYME-HDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQY 167 (332)
Q Consensus 89 ~~~~~lv~e~~~-~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~ 167 (332)
+.+.++|+|.++ |.+.+.+. ..-.+++....++++||+.++.|||.++|+|+||||+|||++++.+++|+|||++...
T Consensus 95 ~sF~FlVFdl~prGELFDyLt-s~VtlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILlddn~~i~isDFGFa~~l 173 (411)
T KOG0599|consen 95 DAFVFLVFDLMPRGELFDYLT-SKVTLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILLDDNMNIKISDFGFACQL 173 (411)
T ss_pred cchhhhhhhhcccchHHHHhh-hheeecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheeeccccceEEeccceeecc
Confidence 589999999999 45555554 4788999999999999999999999999999999999999999999999999999887
Q ss_pred CCCCCCCccccccccccchhhhcC-----CCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcc
Q 035861 168 GSPLKPYTSLVVTLWYRAPELLLG-----AKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIW 242 (332)
Q Consensus 168 ~~~~~~~~~~~~~~~y~aPE~~~~-----~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 242 (332)
. +.......|||+.|.|||.+.+ ...|+...|+|++|++||.++.|.+||....+...+..++.+......+
T Consensus 174 ~-~GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~ImeGkyqF~sp-- 250 (411)
T KOG0599|consen 174 E-PGEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMIMEGKYQFRSP-- 250 (411)
T ss_pred C-CchhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhcccccCCc--
Confidence 4 3455677899999999999864 2357889999999999999999999999988888888887764433322
Q ss_pred cCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCCCCCCC
Q 035861 243 PGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVPLPKSK 318 (332)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~~~~ 318 (332)
.+.++|.+.++||++||+.||++|.|++|+|+||||.++.....+
T Consensus 251 -------------------------------eWadis~~~KdLIsrlLqVdp~~Ritake~LaHpff~q~~~~~~r 295 (411)
T KOG0599|consen 251 -------------------------------EWADISATVKDLISRLLQVDPTKRITAKEALAHPFFIQIAQQQAR 295 (411)
T ss_pred -------------------------------chhhccccHHHHHHHHHeeCchhcccHHHHhcChHHHHHHHhccc
Confidence 344589999999999999999999999999999999877655544
No 63
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=1.5e-47 Score=335.53 Aligned_cols=262 Identities=25% Similarity=0.390 Sum_probs=212.8
Q ss_pred cccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhC-CCCCeeeeeeeEEcCCC
Q 035861 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSF-DHPSIVNVKEVVMDDHD 90 (332)
Q Consensus 12 ~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~ 90 (332)
+|++++.||+|+||.||+|.+..+++.||+|++........... ..+..|..++..+ .|++|+.+++.+ .+..
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~-----~~~~~e~~~l~~~~~~~~i~~~~~~~-~~~~ 74 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDV-----ECTMVEKRVLALSGKPPFLTQLHSCF-QTMD 74 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHH-----HHHHHHHHHHHhccCCCeEeeEEEEE-ecCC
Confidence 58899999999999999999999999999999976432221111 1345677777777 578888888887 4457
Q ss_pred eEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCCC
Q 035861 91 SVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSP 170 (332)
Q Consensus 91 ~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~~ 170 (332)
..++||||++|+.+.......+.+++..+..++.||+.||+|||++||+|+||||+||+++.++.++|+|||++......
T Consensus 75 ~~~lv~E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~ 154 (323)
T cd05616 75 RLYFVMEYVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWD 154 (323)
T ss_pred EEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEECCCCcEEEccCCCceecCCC
Confidence 89999999986544444444678999999999999999999999999999999999999999999999999998754333
Q ss_pred CCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCCcc
Q 035861 171 LKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPG 250 (332)
Q Consensus 171 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (332)
........|++.|+|||++.. ..++.++|+||||+++|+|++|..||...+.......+.......
T Consensus 155 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~~i~~~~~~~------------- 220 (323)
T cd05616 155 GVTTKTFCGTPDYIAPEIIAY-QPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAY------------- 220 (323)
T ss_pred CCccccCCCChhhcCHHHhcC-CCCCCccchhchhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCC-------------
Confidence 333345678999999999987 678999999999999999999999999887776666554321111
Q ss_pred ccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCC-----HHHHhcCCCCCCCCCCCC
Q 035861 251 AKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRIT-----VDDALNHYWFHEVPLPKS 317 (332)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps-----~~ell~hp~f~~~~~~~~ 317 (332)
+..++.++.+|+.+||+.||++|++ ..++++||||..+.|...
T Consensus 221 ------------------------p~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~~~~~~~~~~ 268 (323)
T cd05616 221 ------------------------PKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWEKL 268 (323)
T ss_pred ------------------------CCcCCHHHHHHHHHHcccCHHhcCCCCCCCHHHHhcCCCcCCCCHHHH
Confidence 1237889999999999999999997 489999999998876554
No 64
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=9.7e-48 Score=343.72 Aligned_cols=276 Identities=28% Similarity=0.390 Sum_probs=217.1
Q ss_pred hcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCC
Q 035861 11 FEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHD 90 (332)
Q Consensus 11 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 90 (332)
++|++++.||.|+||+||++.+..+++.||||++.......... ...+.+|+.+++.++||||+++++.+. +..
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~-----~~~~~~E~~il~~l~hp~iv~~~~~~~-~~~ 74 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQ-----LAHVKAERDVLAESDSPWVVSLYYSFQ-DAQ 74 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHH-----HHHHHHHHHHHHhCCCCCcceEEEEEE-cCC
Confidence 47999999999999999999999999999999987543211111 124568999999999999999999985 447
Q ss_pred eEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCCC
Q 035861 91 SVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSP 170 (332)
Q Consensus 91 ~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~~ 170 (332)
..|+||||++|+.+.......+.+++..+..++.|++.||+|||++||+|+||||+||+++.++.++|+|||++......
T Consensus 75 ~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~ 154 (377)
T cd05629 75 YLYLIMEFLPGGDLMTMLIKYDTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQ 154 (377)
T ss_pred eeEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEEeecccccccccc
Confidence 89999999987555444444678999999999999999999999999999999999999999999999999988532110
Q ss_pred C-------------C----------------------------------CCccccccccccchhhhcCCCCCCchhHHHH
Q 035861 171 L-------------K----------------------------------PYTSLVVTLWYRAPELLLGAKKYSTAVDMWS 203 (332)
Q Consensus 171 ~-------------~----------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~s 203 (332)
. . ......||+.|+|||++.. ..++.++|+||
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwS 233 (377)
T cd05629 155 HDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQ-QGYGQECDWWS 233 (377)
T ss_pred cccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHcc-CCCCCceeeEe
Confidence 0 0 0012368999999999876 67899999999
Q ss_pred HHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHH
Q 035861 204 VGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGF 283 (332)
Q Consensus 204 lG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (332)
||+++|+|++|..||...+..+....+...... ...+....++.+++
T Consensus 234 lGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~---------------------------------~~~p~~~~~s~~~~ 280 (377)
T cd05629 234 LGAIMFECLIGWPPFCSENSHETYRKIINWRET---------------------------------LYFPDDIHLSVEAE 280 (377)
T ss_pred cchhhhhhhcCCCCCCCCCHHHHHHHHHccCCc---------------------------------cCCCCCCCCCHHHH
Confidence 999999999999999887766655555432100 00111123688999
Q ss_pred HHHHHhcCCCCCCC---CCHHHHhcCCCCCCCCCCCCCCCCCCCCCc
Q 035861 284 DLLNRLLTYDPEKR---ITVDDALNHYWFHEVPLPKSKDFMPTFPPQ 327 (332)
Q Consensus 284 ~li~~~l~~dp~~R---ps~~ell~hp~f~~~~~~~~~~~~~~~~~~ 327 (332)
+||.+||. +|.+| +++.++++||||+.+.+...+...+++.|+
T Consensus 281 dli~~lL~-~~~~r~~r~~~~~~l~hp~~~~~~~~~~~~~~~~~~~~ 326 (377)
T cd05629 281 DLIRRLIT-NAENRLGRGGAHEIKSHPFFRGVDWDTIRQIRAPFIPQ 326 (377)
T ss_pred HHHHHHhc-CHhhcCCCCCHHHHhcCCCcCCCCHHHHccCCCCcccC
Confidence 99999998 67665 599999999999998876666665555554
No 65
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=2.5e-47 Score=333.01 Aligned_cols=267 Identities=27% Similarity=0.475 Sum_probs=210.4
Q ss_pred ccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhh-CCCCCeeeeeeeEEcCCCeEEEE
Q 035861 17 NKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS-FDHPSIVNVKEVVMDDHDSVYMV 95 (332)
Q Consensus 17 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~~lv 95 (332)
+.||+|+||+||+|.+..+++.||+|++........... ..+..|..++.. ..||||+.+++.+. .....++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~-----~~~~~e~~~l~~~~~hp~i~~~~~~~~-~~~~~~lv 74 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDV-----ECTMVERRVLALAWEHPFLTHLFCTFQ-TKEHLFFV 74 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhH-----HHHHHHHHHHHhccCCCCccceeeEEE-cCCEEEEE
Confidence 469999999999999999999999999976432211111 123456666654 48999999999884 44789999
Q ss_pred cccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCCCCCCCc
Q 035861 96 MEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYT 175 (332)
Q Consensus 96 ~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~~~~~~~ 175 (332)
|||++|+.+.........+++..+..++.||+.||+|||++||+|+||||+||+++.++.++|+|||++...........
T Consensus 75 ~e~~~gg~L~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~~~~~ 154 (316)
T cd05592 75 MEYLNGGDLMFHIQSSGRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEGKAS 154 (316)
T ss_pred EcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCCCccc
Confidence 99998765555555567899999999999999999999999999999999999999999999999999876433333344
Q ss_pred cccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCCccccccc
Q 035861 176 SLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGAKANF 255 (332)
Q Consensus 176 ~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (332)
...|++.|+|||.+.+ ..++.++|+||||+++|+|++|..||...+..+....+......
T Consensus 155 ~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~------------------- 214 (316)
T cd05592 155 TFCGTPDYIAPEILKG-QKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILNDRPH------------------- 214 (316)
T ss_pred cccCCccccCHHHHcC-CCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCC-------------------
Confidence 5678999999999976 66899999999999999999999999988776655554322110
Q ss_pred cCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCH-HHHhcCCCCCCCCCCCC--CCCCCCCCCc
Q 035861 256 AKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITV-DDALNHYWFHEVPLPKS--KDFMPTFPPQ 327 (332)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~-~ell~hp~f~~~~~~~~--~~~~~~~~~~ 327 (332)
.+..++.++.+||.+||+.||.+||++ .++++||||..+.+... +...+.+.|+
T Consensus 215 ------------------~~~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~~h~~~~~~~~~~~~~~~~~~~~~~~ 271 (316)
T cd05592 215 ------------------FPRWISKEAKDCLSKLFERDPTKRLGVDGDIRQHPFFRGIDWERLEKREIPPPFKPK 271 (316)
T ss_pred ------------------CCCCCCHHHHHHHHHHccCCHHHcCCChHHHHcCcccCCCCHHHHHhCCCCCCcCCC
Confidence 112268889999999999999999986 58999999998875433 2333444443
No 66
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=9.8e-48 Score=340.44 Aligned_cols=297 Identities=32% Similarity=0.509 Sum_probs=233.6
Q ss_pred cccccchhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCC-C-----CC
Q 035861 4 LQGCRSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFD-H-----PS 77 (332)
Q Consensus 4 ~~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h-----~~ 77 (332)
+.+...-.+|.|++.||+|+||+|.+|.+..|++.||||+++....... +...|+.+|..++ | -|
T Consensus 179 v~~d~i~~rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~f~~---------Q~~~Ei~iL~~ln~~d~~~~~n 249 (586)
T KOG0667|consen 179 VVNDHIAYRYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKRFLR---------QAQIEIRILELLNKHDPDDKYN 249 (586)
T ss_pred EecceeEEEEEEEEEecccccceeEEEEecCCCcEEEEEeeccChHHHH---------HHHHHHHHHHHHhccCCCCCee
Confidence 3344444589999999999999999999999999999999986543221 3458999999886 3 57
Q ss_pred eeeeeeeEEcCCCeEEEEcccccccHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCC--
Q 035861 78 IVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMK-QPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQG-- 154 (332)
Q Consensus 78 i~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~-~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~-- 154 (332)
++++++++ ...++.|||+|.++-+|.+.+..++ ..++...++.++.||+.||.+||+.||||+||||+|||+...+
T Consensus 250 ~Vrm~d~F-~fr~HlciVfELL~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~~r~ 328 (586)
T KOG0667|consen 250 IVRMLDYF-YFRNHLCIVFELLSTNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDPKRS 328 (586)
T ss_pred EEEeeecc-ccccceeeeehhhhhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccCCcC
Confidence 99999999 5558899999999999999888754 5699999999999999999999999999999999999997544
Q ss_pred cEEEeecccccccCCCCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHc
Q 035861 155 VLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTL 234 (332)
Q Consensus 155 ~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~ 234 (332)
.|||+|||++...... .+ ..+.+..|+|||++.+ .+|+.+.|||||||++.||++|.+.|.+.+..+.+..|+..+
T Consensus 329 ~vKVIDFGSSc~~~q~--vy-tYiQSRfYRAPEVILG-lpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~l 404 (586)
T KOG0667|consen 329 RIKVIDFGSSCFESQR--VY-TYIQSRFYRAPEVILG-LPYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVL 404 (586)
T ss_pred ceeEEecccccccCCc--ce-eeeeccccccchhhcc-CCCCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHh
Confidence 7999999999876432 22 6678899999999998 889999999999999999999999999999999999999999
Q ss_pred CCCCCCcccCCCCCccccc----------ccc-------CCchhh-----hhhhCCCCccCCCC----CCCchHHHHHHH
Q 035861 235 GTPTETIWPGLSELPGAKA----------NFA-------KQPYNL-----LRKRFPAASFTGSP----VLSESGFDLLNR 288 (332)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~----------~~~-------~~~~~~-----~~~~~~~~~~~~~~----~~~~~~~~li~~ 288 (332)
+.|+...+....+.-.... ... ...... .....|.......+ .-...+.+||.+
T Consensus 405 G~Pp~~mL~~~~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~ 484 (586)
T KOG0667|consen 405 GLPPPKMLDTAKKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKR 484 (586)
T ss_pred CCCCHHHHHhccccceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHH
Confidence 9888765554332111000 000 000010 11111211111111 223467899999
Q ss_pred hcCCCCCCCCCHHHHhcCCCCCCCCC
Q 035861 289 LLTYDPEKRITVDDALNHYWFHEVPL 314 (332)
Q Consensus 289 ~l~~dp~~Rps~~ell~hp~f~~~~~ 314 (332)
||.+||.+|+|+.++|+||||+....
T Consensus 485 ~L~~dP~~R~tp~qal~Hpfl~~~~~ 510 (586)
T KOG0667|consen 485 CLEWDPAERITPAQALNHPFLTGTSL 510 (586)
T ss_pred HhccCchhcCCHHHHhcCcccccccc
Confidence 99999999999999999999996553
No 67
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=2.7e-47 Score=339.30 Aligned_cols=279 Identities=24% Similarity=0.329 Sum_probs=220.1
Q ss_pred cchhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEc
Q 035861 8 RSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMD 87 (332)
Q Consensus 8 ~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~ 87 (332)
...++|++.+.||+|+||+||++++..+++.||+|++.......... ...+.+|+.+++.++||||+++++.+ .
T Consensus 40 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~-----~~~~~~e~~il~~~~h~~iv~~~~~~-~ 113 (370)
T cd05596 40 MKAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSD-----SAFFWEERDIMAHANSEWIVQLHYAF-Q 113 (370)
T ss_pred CCHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhh-----HHHHHHHHHHHHhCCCCCcceEEEEE-e
Confidence 45679999999999999999999999999999999997533211111 11356899999999999999999988 4
Q ss_pred CCCeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeeccccccc
Q 035861 88 DHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQY 167 (332)
Q Consensus 88 ~~~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~ 167 (332)
+....++||||++|+.+..+.. +..+++..+..++.||+.||+|||++||+|+||||+||+++.++.++|+|||.+...
T Consensus 114 ~~~~~~lv~Ey~~gg~L~~~l~-~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~ 192 (370)
T cd05596 114 DDKYLYMVMEYMPGGDLVNLMS-NYDIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKM 192 (370)
T ss_pred cCCEEEEEEcCCCCCcHHHHHH-hcCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEcCCCCEEEEeccceeec
Confidence 5588999999998765544444 346899999999999999999999999999999999999999999999999998765
Q ss_pred CCCCC-CCccccccccccchhhhcCC---CCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCccc
Q 035861 168 GSPLK-PYTSLVVTLWYRAPELLLGA---KKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWP 243 (332)
Q Consensus 168 ~~~~~-~~~~~~~~~~y~aPE~~~~~---~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (332)
..... ......|++.|+|||.+.+. ..++.++|+||||+++|+|++|..||...+.......+......
T Consensus 193 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~------- 265 (370)
T cd05596 193 DANGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMDHKNS------- 265 (370)
T ss_pred cCCCcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCc-------
Confidence 43221 23355789999999998652 34788999999999999999999999988776666665432110
Q ss_pred CCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCC--CCCHHHHhcCCCCCCCCC--CCCCC
Q 035861 244 GLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEK--RITVDDALNHYWFHEVPL--PKSKD 319 (332)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~--Rps~~ell~hp~f~~~~~--~~~~~ 319 (332)
........++.++++||.+||+.+|.+ |++++++++||||++..+ ...+.
T Consensus 266 --------------------------~~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h~~~~~~~~~~~~~~~ 319 (370)
T cd05596 266 --------------------------LTFPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSHPFFKNDQWTFDNIRE 319 (370)
T ss_pred --------------------------CCCCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcCcccCCCChhhHHhcC
Confidence 011112237899999999999999988 999999999999998543 33334
Q ss_pred CCCCCCC
Q 035861 320 FMPTFPP 326 (332)
Q Consensus 320 ~~~~~~~ 326 (332)
..+++.|
T Consensus 320 ~~~~~~p 326 (370)
T cd05596 320 TVAPVVP 326 (370)
T ss_pred CCcCccC
Confidence 4444444
No 68
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=2.8e-47 Score=333.07 Aligned_cols=255 Identities=27% Similarity=0.437 Sum_probs=207.8
Q ss_pred ccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhC-CCCCeeeeeeeEEcCCCeEEEE
Q 035861 17 NKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSF-DHPSIVNVKEVVMDDHDSVYMV 95 (332)
Q Consensus 17 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~lv 95 (332)
+.||+|+||+||+|.+..++..||+|++........... ..+..|..+++.+ .||||+++++.+. +....|+|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~-----~~~~~e~~il~~~~~h~~i~~~~~~~~-~~~~~~lv 74 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDV-----ECTMTEKRVLALAGKHPFLTQLHSCFQ-TKDRLFFV 74 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHH-----HHHHHHHHHHHhccCCCCccceeeEEE-cCCEEEEE
Confidence 469999999999999999999999999986532211111 1345788888777 7999999999884 44789999
Q ss_pred cccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCCCCCCCc
Q 035861 96 MEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYT 175 (332)
Q Consensus 96 ~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~~~~~~~ 175 (332)
|||++|+.+.......+.+++..+..++.||+.||+|||+.|++|+||||+||+++.++.++|+|||++...........
T Consensus 75 ~e~~~~~~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 154 (318)
T cd05570 75 MEYVNGGDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVTTS 154 (318)
T ss_pred EcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEECCCCcEEecccCCCeecCcCCCccc
Confidence 99998765555555567899999999999999999999999999999999999999999999999998865322223334
Q ss_pred cccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCCccccccc
Q 035861 176 SLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGAKANF 255 (332)
Q Consensus 176 ~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (332)
...|+..|+|||++.+ ..++.++|+||||+++|+|++|..||...+.......+......
T Consensus 155 ~~~g~~~y~aPE~~~~-~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~i~~~~~~------------------- 214 (318)
T cd05570 155 TFCGTPDYIAPEILSY-QPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILEDEVR------------------- 214 (318)
T ss_pred ceecCccccCHHHhcC-CCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCC-------------------
Confidence 4568999999999987 67899999999999999999999999887766555544322110
Q ss_pred cCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCH-----HHHhcCCCCCCCCCC
Q 035861 256 AKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITV-----DDALNHYWFHEVPLP 315 (332)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~-----~ell~hp~f~~~~~~ 315 (332)
.+..++..+.+||.+||+.||.+||++ .++++||||+.+.+.
T Consensus 215 ------------------~~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~~~~~~~~~~ 261 (318)
T cd05570 215 ------------------YPRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGHPFFREIDWD 261 (318)
T ss_pred ------------------CCCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcCCCcCCCCHH
Confidence 112268899999999999999999999 999999999997653
No 69
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=3.2e-47 Score=340.61 Aligned_cols=265 Identities=26% Similarity=0.363 Sum_probs=210.2
Q ss_pred cccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCCe
Q 035861 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHDS 91 (332)
Q Consensus 12 ~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 91 (332)
.|++++.||+|+||+||+|++..+++.||+|++.......... ...+..|+.++++++|+||+++++.+.+ ...
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~-----~~~~~~E~~il~~l~h~~iv~l~~~~~~-~~~ 75 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQ-----VAHVKAERDILAEADNEWVVKLYYSFQD-KDN 75 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHH-----HHHHHHHHHHHHhcCCCCeeeeEEEEec-CCE
Confidence 6899999999999999999999999999999997643222111 1245689999999999999999999954 478
Q ss_pred EEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCCCC
Q 035861 92 VYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPL 171 (332)
Q Consensus 92 ~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~~~ 171 (332)
.|+||||++|+.+..+....+.+++..+..++.||+.||+|||+.||+|+||||+||+++.+++++|+|||++.......
T Consensus 76 ~~lv~E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~ 155 (381)
T cd05626 76 LYFVMDYIPGGDMMSLLIRMEVFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTH 155 (381)
T ss_pred EEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEECCCCCEEEeeCcCCccccccc
Confidence 99999999876555455456789999999999999999999999999999999999999999999999999875321000
Q ss_pred -----------------------------------------------CCCccccccccccchhhhcCCCCCCchhHHHHH
Q 035861 172 -----------------------------------------------KPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSV 204 (332)
Q Consensus 172 -----------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~sl 204 (332)
.......||..|+|||.+.+ ..++.++|||||
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~~DiwSl 234 (381)
T cd05626 156 NSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLR-KGYTQLCDWWSV 234 (381)
T ss_pred ccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcC-CCCCCccceeeh
Confidence 00123468999999999876 668999999999
Q ss_pred HHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHH
Q 035861 205 GCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFD 284 (332)
Q Consensus 205 G~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (332)
|+++|+|++|..||...+.......+...... ........+++++++
T Consensus 235 G~il~elltG~~Pf~~~~~~~~~~~i~~~~~~---------------------------------~~~~~~~~~s~~~~d 281 (381)
T cd05626 235 GVILFEMLVGQPPFLAPTPTETQLKVINWENT---------------------------------LHIPPQVKLSPEAVD 281 (381)
T ss_pred hhHHHHHHhCCCCCcCCCHHHHHHHHHccccc---------------------------------cCCCCCCCCCHHHHH
Confidence 99999999999999887766555544321110 001111237899999
Q ss_pred HHHHhc--CCCCCCCCCHHHHhcCCCCCCCCCCC
Q 035861 285 LLNRLL--TYDPEKRITVDDALNHYWFHEVPLPK 316 (332)
Q Consensus 285 li~~~l--~~dp~~Rps~~ell~hp~f~~~~~~~ 316 (332)
||.+|+ ..++..|++++++++||||.++.+..
T Consensus 282 li~~ll~~~~~~~~R~~~~~~l~hp~f~~~~~~~ 315 (381)
T cd05626 282 LITKLCCSAEERLGRNGADDIKAHPFFSEVDFSS 315 (381)
T ss_pred HHHHHccCcccccCCCCHHHHhcCcccCCCChhH
Confidence 999955 45555699999999999999877654
No 70
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=3.4e-47 Score=332.12 Aligned_cols=256 Identities=25% Similarity=0.410 Sum_probs=205.9
Q ss_pred ccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhC-CCCCeeeeeeeEEcCCCeEEEE
Q 035861 17 NKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSF-DHPSIVNVKEVVMDDHDSVYMV 95 (332)
Q Consensus 17 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~lv 95 (332)
+.||+|+||.||+|.+..+++.||+|++.......... ......|..++... .||+|+++++.+.. ....|+|
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~-----~~~~~~e~~~l~~~~~~~~i~~~~~~~~~-~~~~~lv 74 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDD-----VECTMVEKRVLALAWENPFLTHLYCTFQT-KEHLFFV 74 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcch-----HHHHHHHHHHHHhccCCCCccCeeEEEEe-CCEEEEE
Confidence 46999999999999999999999999997643211111 11345677777654 89999999999844 4789999
Q ss_pred cccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCCCCCCCc
Q 035861 96 MEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYT 175 (332)
Q Consensus 96 ~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~~~~~~~ 175 (332)
|||+.|+.+.........+++..+..++.|++.||+|||++|++|+||||+||+++.++.++|+|||.+...........
T Consensus 75 ~E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 154 (316)
T cd05620 75 MEFLNGGDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDNRAS 154 (316)
T ss_pred ECCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEeCccCCCeecccCCCcee
Confidence 99999755544444467899999999999999999999999999999999999999999999999998875433233334
Q ss_pred cccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCCccccccc
Q 035861 176 SLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGAKANF 255 (332)
Q Consensus 176 ~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (332)
...|+..|+|||++.+ ..++.++|+||||+++|+|++|..||...+.......+.......
T Consensus 155 ~~~gt~~y~aPE~~~~-~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~~~~~~~~------------------ 215 (316)
T cd05620 155 TFCGTPDYIAPEILQG-LKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRVDTPHY------------------ 215 (316)
T ss_pred ccCCCcCccCHHHHcC-CCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCC------------------
Confidence 5678999999999987 678999999999999999999999998877665555443221110
Q ss_pred cCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCH-HHHhcCCCCCCCCCCC
Q 035861 256 AKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITV-DDALNHYWFHEVPLPK 316 (332)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~-~ell~hp~f~~~~~~~ 316 (332)
+..++.++++||.+||+.||++|+++ +++++||||..+.+..
T Consensus 216 -------------------~~~~~~~~~~li~~~l~~dP~~R~~~~~~~~~h~~f~~~~~~~ 258 (316)
T cd05620 216 -------------------PRWITKESKDILEKLFERDPTRRLGVVGNIRGHPFFKTINWTA 258 (316)
T ss_pred -------------------CCCCCHHHHHHHHHHccCCHHHcCCChHHHHcCCCcCCCCHHH
Confidence 11268899999999999999999997 5899999999987543
No 71
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=4.6e-47 Score=326.03 Aligned_cols=260 Identities=23% Similarity=0.342 Sum_probs=206.0
Q ss_pred ccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCCeEEEEccc
Q 035861 19 ISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHDSVYMVMEY 98 (332)
Q Consensus 19 lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~lv~e~ 98 (332)
||+|+||+||++.+..+++.+|+|.+.......... ...+..|+.+++.+.|+||+.+.+.+ ......++||||
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~-----~~~~~~E~~il~~l~~~~i~~~~~~~-~~~~~~~lv~e~ 74 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKG-----YEGAMVEKRILAKVHSRFIVSLAYAF-QTKTDLCLVMTI 74 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHH-----HHHHHHHHHHHHhCCCCcEeeeeEEE-cCCCeEEEEEeC
Confidence 699999999999999999999999987543222111 12456799999999999999999888 444789999999
Q ss_pred ccccHHH-HHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCCCCCCC
Q 035861 99 MEHDLKW-LMES---MKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPY 174 (332)
Q Consensus 99 ~~~~l~~-~~~~---~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~~~~~~ 174 (332)
++|+.+. .+.. .+..+++..+..++.||+.||+|||++|++|+||+|+||+++.++.++|+|||.+..........
T Consensus 75 ~~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~ 154 (280)
T cd05608 75 MNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSKT 154 (280)
T ss_pred CCCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCccceecCCCCccc
Confidence 9875544 3322 34569999999999999999999999999999999999999999999999999987654433333
Q ss_pred ccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCCcccccc
Q 035861 175 TSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGAKAN 254 (332)
Q Consensus 175 ~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (332)
....|++.|+|||.+.+ ..++.++|+||||+++|+|++|..||...........+.......
T Consensus 155 ~~~~g~~~y~aPE~~~~-~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~----------------- 216 (280)
T cd05608 155 KGYAGTPGFMAPELLQG-EEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILND----------------- 216 (280)
T ss_pred cccCCCcCccCHHHhcC-CCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhccc-----------------
Confidence 45578899999999987 678899999999999999999999997654332222222111000
Q ss_pred ccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCC-----CHHHHhcCCCCCCCCCCCCC
Q 035861 255 FAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRI-----TVDDALNHYWFHEVPLPKSK 318 (332)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp-----s~~ell~hp~f~~~~~~~~~ 318 (332)
....++.++..+.+|+.+||+.||++|| +++++++||||+++.+....
T Consensus 217 ----------------~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h~~~~~~~~~~~~ 269 (280)
T cd05608 217 ----------------SVTYPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTHPLFRDLNWRQLE 269 (280)
T ss_pred ----------------CCCCcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcChhhhcCCHhHHh
Confidence 0111233788999999999999999999 88999999999998877553
No 72
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-49 Score=335.96 Aligned_cols=257 Identities=26% Similarity=0.423 Sum_probs=220.0
Q ss_pred cccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCCe
Q 035861 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHDS 91 (332)
Q Consensus 12 ~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 91 (332)
.|..++.||+|+||.||+|.++.+++.||+|++.......+.. .+.+|+.++.+++++||..+++.+..+ ..
T Consensus 14 ~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIe-------diqqei~~Ls~~~~~~it~yygsyl~g-~~ 85 (467)
T KOG0201|consen 14 LYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIE-------DIQQEISVLSQCDSPNITEYYGSYLKG-TK 85 (467)
T ss_pred ccccchhccccccceeeeeeeccccceEEEEEechhhcchhhH-------HHHHHHHHHHhcCcchHHhhhhheeec-cc
Confidence 7888899999999999999999999999999998876544322 456899999999999999999999666 78
Q ss_pred EEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCCCC
Q 035861 92 VYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPL 171 (332)
Q Consensus 92 ~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~~~ 171 (332)
++++||||.|+....+......+++..+..++++++.||.|||..+.+|+|||+.||++..+|.+||+|||.+.......
T Consensus 86 LwiiMey~~gGsv~~lL~~~~~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~ 165 (467)
T KOG0201|consen 86 LWIIMEYCGGGSVLDLLKSGNILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLSESGDVKLADFGVAGQLTNTV 165 (467)
T ss_pred HHHHHHHhcCcchhhhhccCCCCccceeeeehHHHHHHhhhhhhcceecccccccceeEeccCcEEEEecceeeeeechh
Confidence 99999999987766666656777999999999999999999999999999999999999999999999999999887665
Q ss_pred CCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCCccc
Q 035861 172 KPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGA 251 (332)
Q Consensus 172 ~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (332)
....+..||+.|||||++.. ..|+.++||||||++.+||++|.+|+....+......| +...
T Consensus 166 ~rr~tfvGTPfwMAPEVI~~-~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlflI-------pk~~---------- 227 (467)
T KOG0201|consen 166 KRRKTFVGTPFWMAPEVIKQ-SGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLFLI-------PKSA---------- 227 (467)
T ss_pred hccccccccccccchhhhcc-ccccchhhhhhhhHHHHHHhcCCCCCcccCcceEEEec-------cCCC----------
Confidence 66688999999999999995 78999999999999999999999999887652221111 1110
Q ss_pred cccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCC
Q 035861 252 KANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVP 313 (332)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~ 313 (332)
+......+|+.+++||..||.+||+.||+|.++|+|+|++...
T Consensus 228 -------------------PP~L~~~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh~FIk~a~ 270 (467)
T KOG0201|consen 228 -------------------PPRLDGDFSPPFKEFVEACLDKNPEFRPSAKELLKHKFIKRAK 270 (467)
T ss_pred -------------------CCccccccCHHHHHHHHHHhhcCcccCcCHHHHhhhHHHHhcC
Confidence 1111114799999999999999999999999999999999843
No 73
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.5e-49 Score=321.20 Aligned_cols=280 Identities=29% Similarity=0.446 Sum_probs=244.3
Q ss_pred cchhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEc
Q 035861 8 RSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMD 87 (332)
Q Consensus 8 ~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~ 87 (332)
..+++|++++.||+|.||+|-+++.+.+++.||+|++++......... ..-+.|-++|+..+||.+..+...+ +
T Consensus 165 vTm~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEV-----AHTlTE~RVL~~~~HPFLt~LKYsF-Q 238 (516)
T KOG0690|consen 165 VTMEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEV-----AHTLTENRVLQNCRHPFLTSLKYSF-Q 238 (516)
T ss_pred eccchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHh-----hhhhhHHHHHHhccCcHHHHhhhhh-c
Confidence 357899999999999999999999999999999999987654333222 2346789999999999999988888 5
Q ss_pred CCCeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeeccccccc
Q 035861 88 DHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQY 167 (332)
Q Consensus 88 ~~~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~ 167 (332)
....+|+||||+.|+-+.....+...+++...+.+...|..||.|||+++|+.+|||.+|.++|++|++||+|||+|+..
T Consensus 239 t~drlCFVMeyanGGeLf~HLsrer~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~ 318 (516)
T KOG0690|consen 239 TQDRLCFVMEYANGGELFFHLSRERVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLLDKDGHIKITDFGLCKEE 318 (516)
T ss_pred cCceEEEEEEEccCceEeeehhhhhcccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhheeccCCceEeeecccchhc
Confidence 55889999999998755555555778999999999999999999999999999999999999999999999999999876
Q ss_pred CCCCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCC
Q 035861 168 GSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSE 247 (332)
Q Consensus 168 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (332)
-.......+.|||+.|.|||++.. ..|..+.|.|.+|++||||++|+.||.+.+.......|....-..|..
T Consensus 319 I~~g~t~kTFCGTPEYLAPEVleD-nDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl~ed~kFPr~------- 390 (516)
T KOG0690|consen 319 IKYGDTTKTFCGTPEYLAPEVLED-NDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELILMEDLKFPRT------- 390 (516)
T ss_pred ccccceeccccCChhhcCchhhcc-ccccceeehhhhhHHHHHHHhccCcccccchhHHHHHHHhhhccCCcc-------
Confidence 555566778999999999999988 789999999999999999999999999998888887776543333222
Q ss_pred CccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCC-----CHHHHhcCCCCCCCCCCCC--CCC
Q 035861 248 LPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRI-----TVDDALNHYWFHEVPLPKS--KDF 320 (332)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp-----s~~ell~hp~f~~~~~~~~--~~~ 320 (332)
++++++.|+..+|.+||.+|. .+.||.+|+||..++|.+. ...
T Consensus 391 ------------------------------ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~h~FF~~v~W~~~~~Kki 440 (516)
T KOG0690|consen 391 ------------------------------LSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMRHRFFASVDWEATYRKKI 440 (516)
T ss_pred ------------------------------CCHHHHHHHHHHhhcChHhhcCCCchhHHHHHhhhhhccCCHHHHHHhcc
Confidence 799999999999999999998 6899999999999999988 669
Q ss_pred CCCCCCccccC
Q 035861 321 MPTFPPQHARN 331 (332)
Q Consensus 321 ~~~~~~~~~~~ 331 (332)
.|+|+|+-++.
T Consensus 441 ~PPfKPqVtSe 451 (516)
T KOG0690|consen 441 EPPFKPQVTSE 451 (516)
T ss_pred CCCCCCCcccc
Confidence 99999998763
No 74
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=9.3e-48 Score=338.02 Aligned_cols=276 Identities=26% Similarity=0.409 Sum_probs=221.3
Q ss_pred hcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCC
Q 035861 11 FEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHD 90 (332)
Q Consensus 11 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 90 (332)
++|++.+.||+|+||+||++.+..+++.||+|++.......... ...+.+|+.+++.+.|+||+.+++.+.+ ..
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~-----~~~~~~e~~i~~~~~~~~i~~~~~~~~~-~~ 74 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQET-----VSFFEEERDILSISNSPWIPQLQYAFQD-KD 74 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhH-----HHHHHHHHHHHHhCCCCCCcceeeEEec-CC
Confidence 47999999999999999999999999999999998654311111 1235688999999999999999998844 47
Q ss_pred eEEEEcccccc-cHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCC
Q 035861 91 SVYMVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGS 169 (332)
Q Consensus 91 ~~~lv~e~~~~-~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~ 169 (332)
..++||||++| ++.+.+......+++..+..++.||+.||+|||+.||+||||||+||+++.++.++|+|||++.....
T Consensus 75 ~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~ 154 (330)
T cd05601 75 NLYLVMEYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLIDRTGHIKLADFGSAARLTA 154 (330)
T ss_pred eEEEEECCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEECCCCCEEeccCCCCeECCC
Confidence 89999999976 45555555447899999999999999999999999999999999999999999999999999976543
Q ss_pred CCC-CCccccccccccchhhhcC-----CCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCccc
Q 035861 170 PLK-PYTSLVVTLWYRAPELLLG-----AKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWP 243 (332)
Q Consensus 170 ~~~-~~~~~~~~~~y~aPE~~~~-----~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (332)
... ......|++.|+|||++.. ...++.++|+||||+++|+|++|..||...+......++......
T Consensus 155 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~------- 227 (330)
T cd05601 155 NKMVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNFQRF------- 227 (330)
T ss_pred CCceeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHHHHHHHcCCCc-------
Confidence 222 1233468899999999863 356788999999999999999999999887776666655432110
Q ss_pred CCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCCCCCCCCCCCC
Q 035861 244 GLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVPLPKSKDFMPT 323 (332)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~~~~~~~~~ 323 (332)
...+..+.++..+.+||.+||. +|.+||+++++++||||..+.+.......++
T Consensus 228 --------------------------~~~~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h~~~~~~~~~~~~~~~~~ 280 (330)
T cd05601 228 --------------------------LKFPEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCCHPFFSKIDWNNIRNSLPP 280 (330)
T ss_pred --------------------------cCCCCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCCCCcCCCCHHHHhhCCCC
Confidence 0011123378899999999998 9999999999999999999887766655554
Q ss_pred CCC
Q 035861 324 FPP 326 (332)
Q Consensus 324 ~~~ 326 (332)
..|
T Consensus 281 ~~~ 283 (330)
T cd05601 281 FVP 283 (330)
T ss_pred ccC
Confidence 444
No 75
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=1.6e-47 Score=335.42 Aligned_cols=257 Identities=26% Similarity=0.420 Sum_probs=207.5
Q ss_pred ccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHH-HHhhCCCCCeeeeeeeEEcCCCeEEEE
Q 035861 17 NKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREIN-ILLSFDHPSIVNVKEVVMDDHDSVYMV 95 (332)
Q Consensus 17 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~-~l~~l~h~~i~~~~~~~~~~~~~~~lv 95 (332)
+.||+|+||+||+|++..+++.||+|++........... ..+..|.. +++.++||||+++++.+.. ....++|
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~-----~~~~~e~~~~~~~l~hp~iv~~~~~~~~-~~~~~lv 74 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQ-----KHIMAERNVLLKNVKHPFLVGLHYSFQT-ADKLYFV 74 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHH-----HHHHHHHHHHHhhCCCCCCCCeeEEEEe-CCEEEEE
Confidence 468999999999999999999999999976432211111 12334444 4577899999999998844 4789999
Q ss_pred cccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCCCCCCCc
Q 035861 96 MEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYT 175 (332)
Q Consensus 96 ~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~~~~~~~ 175 (332)
|||++|+.+.......+.+++..+..++.||+.||+|||++||+|+||||+||+++.++.++|+|||++...........
T Consensus 75 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~ 154 (323)
T cd05575 75 LDYVNGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSKTTS 154 (323)
T ss_pred EcCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeccCCCcccccCCCccc
Confidence 99999765554545577899999999999999999999999999999999999999999999999999875433333334
Q ss_pred cccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCCccccccc
Q 035861 176 SLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGAKANF 255 (332)
Q Consensus 176 ~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (332)
...|++.|+|||.+.+ ..++.++|+||||+++|+|++|..||...+..+....+....
T Consensus 155 ~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~--------------------- 212 (323)
T cd05575 155 TFCGTPEYLAPEVLRK-QPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILNKP--------------------- 212 (323)
T ss_pred cccCChhhcChhhhcC-CCCCccccccccchhhhhhhcCCCCCCCCCHHHHHHHHHcCC---------------------
Confidence 5578999999999877 678999999999999999999999998877666655554321
Q ss_pred cCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCH----HHHhcCCCCCCCCCCCC
Q 035861 256 AKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITV----DDALNHYWFHEVPLPKS 317 (332)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~----~ell~hp~f~~~~~~~~ 317 (332)
....+.++..+.+||.+||+.||.+||++ .++++||||..+.+...
T Consensus 213 ----------------~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~il~~~~~~~~~~~~~ 262 (323)
T cd05575 213 ----------------LRLKPNISVSARHLLEGLLQKDRTKRLGAKDDFLEIKNHVFFSSINWDDL 262 (323)
T ss_pred ----------------CCCCCCCCHHHHHHHHHHhhcCHHhCCCCCCCHHHHHcCCCcCCCCHHHH
Confidence 11123368899999999999999999987 69999999998876544
No 76
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=3.5e-47 Score=340.10 Aligned_cols=283 Identities=24% Similarity=0.386 Sum_probs=213.4
Q ss_pred hhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCC
Q 035861 10 VFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDH 89 (332)
Q Consensus 10 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 89 (332)
..+|++++.||.|+||.||++.+..+++.||+|..... .+.+|+.++++++||||+++++.+.. .
T Consensus 91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~~--------------~~~~E~~il~~l~HpnIv~~~~~~~~-~ 155 (391)
T PHA03212 91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQRG--------------GTATEAHILRAINHPSIIQLKGTFTY-N 155 (391)
T ss_pred cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhhh--------------hhHHHHHHHHhCCCCCCCCEeEEEEE-C
Confidence 35799999999999999999999999999999965321 34689999999999999999999854 4
Q ss_pred CeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCC
Q 035861 90 DSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGS 169 (332)
Q Consensus 90 ~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~ 169 (332)
...++|+|++.+++...+.. ...+++..++.++.||+.||+|||++||+|+||||+||+++.++.++|+|||++.....
T Consensus 156 ~~~~lv~e~~~~~L~~~l~~-~~~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~ 234 (391)
T PHA03212 156 KFTCLILPRYKTDLYCYLAA-KRNIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFINHPGDVCLGDFGAACFPVD 234 (391)
T ss_pred CeeEEEEecCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEEcCCCCEEEEeCCccccccc
Confidence 78899999999888777665 56789999999999999999999999999999999999999999999999999865322
Q ss_pred -CCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC-------hHHHHHHHHHHcCCCCCCc
Q 035861 170 -PLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTT-------EVDQIDKIFKTLGTPTETI 241 (332)
Q Consensus 170 -~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~-------~~~~~~~~~~~~~~~~~~~ 241 (332)
.........||+.|+|||++.. ..++.++|+||||+++|+|++|..||.... .......+....+.++...
T Consensus 235 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~ 313 (391)
T PHA03212 235 INANKYYGWAGTIATNAPELLAR-DPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEF 313 (391)
T ss_pred ccccccccccCccCCCChhhhcC-CCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhc
Confidence 1122334578999999999876 678999999999999999999998875432 2334455555544443322
Q ss_pred ccCCCCCccccccccCCchhhhhhhC--CCC--ccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCCCC
Q 035861 242 WPGLSELPGAKANFAKQPYNLLRKRF--PAA--SFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVPLP 315 (332)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~--~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~ 315 (332)
...... .............. +.. .+.....++.++.+||.+||+.||.+|||++|+|+||||++++.+
T Consensus 314 ~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~hp~f~~~~~~ 385 (391)
T PHA03212 314 PIDAQA------NLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDFAAFQDIPDP 385 (391)
T ss_pred CcchhH------HHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcChhhccCCCC
Confidence 110000 00000000000000 000 000011256789999999999999999999999999999987544
No 77
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=5e-47 Score=332.15 Aligned_cols=256 Identities=28% Similarity=0.450 Sum_probs=208.7
Q ss_pred cccccccCcEEEEEEEEC---CCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCCeE
Q 035861 16 LNKISEGTYGIVYRARDK---KSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHDSV 92 (332)
Q Consensus 16 ~~~lg~g~~g~v~~~~~~---~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 92 (332)
++.||+|+||.||+++.. .+++.||+|++.......... ....+..|+.+++.++||||+++++.+..+ ...
T Consensus 1 ~~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~----~~~~~~~E~~il~~l~hp~iv~~~~~~~~~-~~~ 75 (323)
T cd05584 1 LKVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQK----DTAHTKAERNILEAVKHPFIVDLIYAFQTG-GKL 75 (323)
T ss_pred CceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhh----hHHHHHHHHHHHHhCCCCchhceeeEEecC-CeE
Confidence 467999999999999864 468899999997543211111 012346899999999999999999998544 789
Q ss_pred EEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCCCCC
Q 035861 93 YMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLK 172 (332)
Q Consensus 93 ~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~~~~ 172 (332)
|+||||++|+.+.......+.+++..+..++.||+.||+|||++|++|+||||+||+++.++.++|+|||++........
T Consensus 76 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 155 (323)
T cd05584 76 YLILEYLSGGELFMHLEREGIFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGT 155 (323)
T ss_pred EEEEeCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEeeCcCCeecccCCC
Confidence 99999999866655555577889999999999999999999999999999999999999999999999999875433333
Q ss_pred CCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCCcccc
Q 035861 173 PYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGAK 252 (332)
Q Consensus 173 ~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (332)
......|++.|+|||.+.+ ..++.++|+||||+++|+|++|..||...+.......+.....
T Consensus 156 ~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~~~~~~~~~----------------- 217 (323)
T cd05584 156 VTHTFCGTIEYMAPEILMR-SGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILKGKL----------------- 217 (323)
T ss_pred cccccCCCccccChhhccC-CCCCCcceecccHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCC-----------------
Confidence 3344578999999999876 5678999999999999999999999988777665555543211
Q ss_pred ccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCC-----CHHHHhcCCCCCCCCC
Q 035861 253 ANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRI-----TVDDALNHYWFHEVPL 314 (332)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp-----s~~ell~hp~f~~~~~ 314 (332)
..++.+++.+.+||.+||+.||++|| +++++++||||....+
T Consensus 218 --------------------~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h~~~~~~~~ 264 (323)
T cd05584 218 --------------------NLPPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSHPFFRHVNW 264 (323)
T ss_pred --------------------CCCCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcCCCcCCCCH
Confidence 11233788999999999999999999 8999999999988654
No 78
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=5.9e-48 Score=333.59 Aligned_cols=258 Identities=28% Similarity=0.461 Sum_probs=229.2
Q ss_pred hhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCC
Q 035861 10 VFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDH 89 (332)
Q Consensus 10 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 89 (332)
+++|.+++.+|+|+||.+++++++.++..+|+|.+........... ....|+.+++++.||||+.+.+.+.+++
T Consensus 3 m~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~------~A~~E~~lis~~~hP~iv~y~ds~~~~~ 76 (426)
T KOG0589|consen 3 MDNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERR------SAIQEMDLLSKLLHPNIVEYKDSFEEDG 76 (426)
T ss_pred cchhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhH------HHHHHHHHHHhccCCCeeeeccchhcCC
Confidence 5789999999999999999999999999999999987665443221 4568999999999999999999998887
Q ss_pred CeEEEEcccccccHHHHHH-hcC-CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeeccccccc
Q 035861 90 DSVYMVMEYMEHDLKWLME-SMK-QPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQY 167 (332)
Q Consensus 90 ~~~~lv~e~~~~~l~~~~~-~~~-~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~ 167 (332)
...+|+|+||+|+.+.... ..+ ..++++.+..|+.|++.|+.|||+++|+|+|||+.|||+++++.|+|+|||+++..
T Consensus 77 ~~l~Ivm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l 156 (426)
T KOG0589|consen 77 QLLCIVMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFLTKDKKVKLGDFGLAKIL 156 (426)
T ss_pred ceEEEEEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhccccCceeecchhhhhhc
Confidence 7799999999986555444 333 56899999999999999999999999999999999999999999999999999998
Q ss_pred CCCCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCC
Q 035861 168 GSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSE 247 (332)
Q Consensus 168 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (332)
...........||+.|++||.+.+ .+|+.++|||||||++|||++.+.+|.+.+......++.+....|..
T Consensus 157 ~~~~~~a~tvvGTp~YmcPEil~d-~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~~~~~~Plp-------- 227 (426)
T KOG0589|consen 157 NPEDSLASTVVGTPYYMCPEILSD-IPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSELILKINRGLYSPLP-------- 227 (426)
T ss_pred CCchhhhheecCCCcccCHHHhCC-CCCCccCcchhhcchHHHHHhcccccCccchHHHHHHHhhccCCCCC--------
Confidence 766556677899999999999988 89999999999999999999999999999999999998887543332
Q ss_pred CccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCC
Q 035861 248 LPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFH 310 (332)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~ 310 (332)
..++.+++.+|..||+.+|..||++.++|.+|...
T Consensus 228 ----------------------------~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~P~l~ 262 (426)
T KOG0589|consen 228 ----------------------------SMYSSELRSLVKSMLRKNPEHRPSALELLRRPHLL 262 (426)
T ss_pred ----------------------------ccccHHHHHHHHHHhhcCCccCCCHHHHhhChhhh
Confidence 23899999999999999999999999999998877
No 79
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=1.9e-47 Score=341.82 Aligned_cols=266 Identities=26% Similarity=0.368 Sum_probs=211.6
Q ss_pred hcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCC
Q 035861 11 FEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHD 90 (332)
Q Consensus 11 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 90 (332)
++|++++.||+|+||+||++++..+++.||||++......... ....+.+|+.++++++|+||+++++.+. +..
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~-----~~~~~~~E~~il~~l~h~~iv~~~~~~~-~~~ 74 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRN-----QAAHVKAERDILAEADNEWVVKLYYSFQ-DKD 74 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhh-----hHHHHHHHHHHHHhCCCCCcceEEEEEE-cCC
Confidence 4799999999999999999999999999999998654321111 1124568999999999999999999984 458
Q ss_pred eEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCCC
Q 035861 91 SVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSP 170 (332)
Q Consensus 91 ~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~~ 170 (332)
..|+||||++|+.+..+....+.+++..+..++.||+.||+|||++||+||||||+||+++.++.++|+|||++......
T Consensus 75 ~~~lv~E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~ 154 (376)
T cd05598 75 NLYFVMDYIPGGDMMSLLIRLGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWT 154 (376)
T ss_pred EEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEECCCCCEEEEeCCCCcccccc
Confidence 89999999987655544444678999999999999999999999999999999999999999999999999987422100
Q ss_pred -------------------------------------------CCCCccccccccccchhhhcCCCCCCchhHHHHHHHH
Q 035861 171 -------------------------------------------LKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCI 207 (332)
Q Consensus 171 -------------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~ 207 (332)
........|++.|+|||++.. ..++.++|+||||++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvi 233 (376)
T cd05598 155 HDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLR-TGYTQLCDWWSVGVI 233 (376)
T ss_pred ccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcC-CCCCcceeeeeccce
Confidence 000113468999999999976 678999999999999
Q ss_pred HHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHH
Q 035861 208 MAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLN 287 (332)
Q Consensus 208 l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 287 (332)
+|+|++|..||...+..+....+...... ........+++++.+||.
T Consensus 234 lyell~G~~Pf~~~~~~~~~~~i~~~~~~---------------------------------~~~~~~~~~s~~~~~li~ 280 (376)
T cd05598 234 LYEMLVGQPPFLADTPAETQLKVINWETT---------------------------------LHIPSQAKLSREASDLIL 280 (376)
T ss_pred eeehhhCCCCCCCCCHHHHHHHHhccCcc---------------------------------ccCCCCCCCCHHHHHHHH
Confidence 99999999999887766555544321110 001112237889999999
Q ss_pred HhcCCCCCCCC---CHHHHhcCCCCCCCCCCCC
Q 035861 288 RLLTYDPEKRI---TVDDALNHYWFHEVPLPKS 317 (332)
Q Consensus 288 ~~l~~dp~~Rp---s~~ell~hp~f~~~~~~~~ 317 (332)
+|+ .+|.+|+ ++.++++||||..+.+...
T Consensus 281 ~l~-~~p~~R~~~~t~~ell~h~~~~~~~~~~~ 312 (376)
T cd05598 281 RLC-CGAEDRLGKNGADEIKAHPFFKGIDFASL 312 (376)
T ss_pred HHh-cCHhhcCCCCCHHHHhCCCCcCCCCHHHH
Confidence 987 5999999 9999999999998875554
No 80
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=3.4e-46 Score=322.05 Aligned_cols=280 Identities=43% Similarity=0.779 Sum_probs=216.5
Q ss_pred cccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhC---CCCCeeeeeeeEEcC
Q 035861 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSF---DHPSIVNVKEVVMDD 88 (332)
Q Consensus 12 ~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l---~h~~i~~~~~~~~~~ 88 (332)
+|++.+.||+|++|+||+|.+..+++.||+|.+......... .....+|+..++.+ +||||+++++++...
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~------~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~ 74 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGL------PLSTVREVALLKRLEAFDHPNIVRLMDVCATS 74 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCC------chHHHHHHHHHHHhhhcCCCCeeeeeeeeccc
Confidence 589999999999999999999999999999998754322111 11334677666655 799999999987432
Q ss_pred ----CCeEEEEcccccccHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeeccc
Q 035861 89 ----HDSVYMVMEYMEHDLKWLMESMK-QPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGM 163 (332)
Q Consensus 89 ----~~~~~lv~e~~~~~l~~~~~~~~-~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~ 163 (332)
....++++|++++++.+.+.... ..+++..+..++.|++.||+|||+.|++|+||||+||+++.++.++|+|||.
T Consensus 75 ~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~kl~dfg~ 154 (288)
T cd07863 75 RTDRETKVTLVFEHVDQDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGQVKLADFGL 154 (288)
T ss_pred cCCCCceEEEEEcccccCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccCc
Confidence 34589999999998877766543 4589999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCccc
Q 035861 164 SRQYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWP 243 (332)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (332)
+...... .......++..|+|||++.+ ..++.++|+||||+++|+|++|..||......+...++....+.+....++
T Consensus 155 ~~~~~~~-~~~~~~~~~~~y~aPE~~~~-~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (288)
T cd07863 155 ARIYSCQ-MALTPVVVTLWYRAPEVLLQ-STYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWP 232 (288)
T ss_pred cccccCc-ccCCCccccccccCchHhhC-CCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCc
Confidence 8765422 22234567889999999976 668999999999999999999999999888877777777765555444333
Q ss_pred CCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCC
Q 035861 244 GLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWF 309 (332)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f 309 (332)
.....+... ... ..+.......+.++..+.+||.+||+.||++||+++|++.||||
T Consensus 233 ~~~~~~~~~--~~~--------~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~hp~f 288 (288)
T cd07863 233 RDVTLPRGA--FSP--------RGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQHPFF 288 (288)
T ss_pred ccccccccc--cCC--------CCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 211111000 000 00111112223478889999999999999999999999999998
No 81
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=1.1e-46 Score=334.54 Aligned_cols=296 Identities=33% Similarity=0.542 Sum_probs=222.4
Q ss_pred cchhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEc
Q 035861 8 RSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMD 87 (332)
Q Consensus 8 ~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~ 87 (332)
...++|++++.||+|+||.||++.+..+++.+|||++......... ...+.+|+.+++.++||||+++++++..
T Consensus 14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~------~~~~~~E~~~l~~l~h~niv~~~~~~~~ 87 (355)
T cd07874 14 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTH------AKRAYRELVLMKCVNHKNIISLLNVFTP 87 (355)
T ss_pred hhhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHH------HHHHHHHHHHHHHhCCCchhceeeeeec
Confidence 3578999999999999999999999999999999998654322111 1245689999999999999999998854
Q ss_pred CC-----CeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecc
Q 035861 88 DH-----DSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFG 162 (332)
Q Consensus 88 ~~-----~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~ 162 (332)
.. ...++||||+++++...+.. .+++..+..++.|++.||+|||++|++|+||||+||+++.++.++|+|||
T Consensus 88 ~~~~~~~~~~~lv~e~~~~~l~~~~~~---~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill~~~~~~kl~Dfg 164 (355)
T cd07874 88 QKSLEEFQDVYLVMELMDANLCQVIQM---ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG 164 (355)
T ss_pred cccccccceeEEEhhhhcccHHHHHhh---cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEECCCCCEEEeeCc
Confidence 32 35799999999988766543 58999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcc
Q 035861 163 MSRQYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIW 242 (332)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 242 (332)
++...... .......++..|+|||.+.+ ..++.++|+||||+++|+|++|..||...+..+....+....+.+.....
T Consensus 165 ~~~~~~~~-~~~~~~~~t~~y~aPE~~~~-~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 242 (355)
T cd07874 165 LARTAGTS-FMMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFM 242 (355)
T ss_pred ccccCCCc-cccCCccccCCccCHHHHcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHH
Confidence 99765432 22344578899999999976 67899999999999999999999999988877777777666554443322
Q ss_pred cCCCCCcccc----ccccCCchh-hhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCCC
Q 035861 243 PGLSELPGAK----ANFAKQPYN-LLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVPL 314 (332)
Q Consensus 243 ~~~~~~~~~~----~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~ 314 (332)
..+....... ......... .................+..+++||.+||+.||++|||+.|+|+||||..+..
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~hp~~~~~~~ 319 (355)
T cd07874 243 KKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQHPYINVWYD 319 (355)
T ss_pred HhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcCcchhcccC
Confidence 2211100000 000000000 00000001111122335678899999999999999999999999999987643
No 82
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=4e-47 Score=340.34 Aligned_cols=275 Identities=25% Similarity=0.382 Sum_probs=215.1
Q ss_pred cccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCCe
Q 035861 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHDS 91 (332)
Q Consensus 12 ~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 91 (332)
.|++++.||+|+||+||+|++..+++.||+|++.......... ...+.+|+.+++++.|+||+++++.+.+ ...
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~-----~~~~~~E~~il~~~~h~~iv~~~~~~~~-~~~ 75 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQ-----VAHVKAERDILAEADNEWVVRLYYSFQD-KDN 75 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHH-----HHHHHHHHHHHHhCCCCcCCeEEEEEEe-CCE
Confidence 6899999999999999999999999999999997543211111 1245689999999999999999999954 478
Q ss_pred EEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCCCC
Q 035861 92 VYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPL 171 (332)
Q Consensus 92 ~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~~~ 171 (332)
.|+||||++|+.+.......+.+++..+..++.||+.||+|||+.||+|+||||+|||++.++.++|+|||++.......
T Consensus 76 ~~lv~E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~ 155 (382)
T cd05625 76 LYFVMDYIPGGDMMSLLIRMGIFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTH 155 (382)
T ss_pred EEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEeECCCCccccccc
Confidence 99999999875444444446779999999999999999999999999999999999999999999999999874321000
Q ss_pred -----------------------------------------------CCCccccccccccchhhhcCCCCCCchhHHHHH
Q 035861 172 -----------------------------------------------KPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSV 204 (332)
Q Consensus 172 -----------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~sl 204 (332)
.......||+.|+|||++.+ ..++.++|+|||
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~~DiwSl 234 (382)
T cd05625 156 DSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLR-TGYTQLCDWWSV 234 (382)
T ss_pred cccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcC-CCCCCeeeEEec
Confidence 00112468999999999976 668999999999
Q ss_pred HHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHH
Q 035861 205 GCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFD 284 (332)
Q Consensus 205 G~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (332)
|+++|+|++|..||...+..+....+...... ...+....+++++.+
T Consensus 235 Gvil~elltG~~Pf~~~~~~~~~~~i~~~~~~---------------------------------~~~p~~~~~s~~~~~ 281 (382)
T cd05625 235 GVILYEMLVGQPPFLAQTPLETQMKVINWQTS---------------------------------LHIPPQAKLSPEASD 281 (382)
T ss_pred hHHHHHHHhCCCCCCCCCHHHHHHHHHccCCC---------------------------------cCCCCcccCCHHHHH
Confidence 99999999999999887766655554432110 011112337899999
Q ss_pred HHHHhcCCCCCCCCC---HHHHhcCCCCCCCCCCCC-CCCCCCCCCc
Q 035861 285 LLNRLLTYDPEKRIT---VDDALNHYWFHEVPLPKS-KDFMPTFPPQ 327 (332)
Q Consensus 285 li~~~l~~dp~~Rps---~~ell~hp~f~~~~~~~~-~~~~~~~~~~ 327 (332)
||.+|+ .+|.+|++ ++++++||||+.+.+... ....+++.|.
T Consensus 282 li~~l~-~~p~~R~~~~~~~ei~~hp~f~~~~~~~~~~~~~~~~~~~ 327 (382)
T cd05625 282 LIIKLC-RGPEDRLGKNGADEIKAHPFFKTIDFSSDLRQQSAPYIPK 327 (382)
T ss_pred HHHHHc-cCHhHcCCCCCHHHHhcCCCcCCcChHHHHhcCCCCccCc
Confidence 999987 49999997 999999999999876543 3334444443
No 83
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=1.4e-46 Score=323.71 Aligned_cols=283 Identities=47% Similarity=0.907 Sum_probs=225.8
Q ss_pred cccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCCe
Q 035861 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHDS 91 (332)
Q Consensus 12 ~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 91 (332)
+|++++.||.|++|.||+|++..++..|+||.+........ ....+.+|++.+++++||||+++++++. +...
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~------~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~ 73 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEG------VPSTAIREISLLKELNHPNIVKLLDVIH-TENK 73 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccc------cchHHHHHHHHHHhcCCCCCcchhhhcc-cCCc
Confidence 48899999999999999999999999999998865432221 1225678999999999999999999984 4578
Q ss_pred EEEEcccccccHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCCC
Q 035861 92 VYMVMEYMEHDLKWLMESM-KQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSP 170 (332)
Q Consensus 92 ~~lv~e~~~~~l~~~~~~~-~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~~ 170 (332)
.++||||+++++...+... ...+++..++.++.|++.||+|||+.|++|+||+|+||+++.++.++|+|||.+......
T Consensus 74 ~~~v~e~~~~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~ 153 (284)
T cd07860 74 LYLVFEFLHQDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 153 (284)
T ss_pred EEEEeeccccCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEeeccchhhcccC
Confidence 9999999998877766543 356899999999999999999999999999999999999999999999999998765443
Q ss_pred CCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCCcc
Q 035861 171 LKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPG 250 (332)
Q Consensus 171 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (332)
........++..|+|||.+.+...++.++|+||||+++|+++||..||...+......++....+.+....++.....+.
T Consensus 154 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (284)
T cd07860 154 VRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPD 233 (284)
T ss_pred ccccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHH
Confidence 33334445678899999887756678999999999999999999999998888877777777766666555554433322
Q ss_pred ccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCC
Q 035861 251 AKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWF 309 (332)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f 309 (332)
......+........ ..+.++.+++++|.+||+.||++||+++++++||||
T Consensus 234 ~~~~~~~~~~~~~~~--------~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~f 284 (284)
T cd07860 234 YKPSFPKWARQDFSK--------VVPPLDEDGRDLLSQMLHYDPNKRISAKAALAHPFF 284 (284)
T ss_pred HHhhcccccccCHHH--------HcccCCHHHHHHHHHhcCCCcccCCCHHHHhcCCCC
Confidence 222221111111111 123378889999999999999999999999999998
No 84
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=1.2e-46 Score=328.44 Aligned_cols=267 Identities=27% Similarity=0.468 Sum_probs=210.5
Q ss_pred ccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhh-CCCCCeeeeeeeEEcCCCeEEEE
Q 035861 17 NKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS-FDHPSIVNVKEVVMDDHDSVYMV 95 (332)
Q Consensus 17 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~~lv 95 (332)
+.||+|+||+||+|.+..+++.||+|++........... .....|...+.. +.||||+++++.+.++ ...++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~-----~~~~~e~~~l~~~~~hp~iv~~~~~~~~~-~~~~lv 74 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDV-----ECTMVEKRVLSLAWEHPFLTHLYCTFQTK-ENLFFV 74 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchH-----HHHHHHHHHHHhccCCCcCcceEEEEEeC-CEEEEE
Confidence 469999999999999999999999999976532111111 134567777765 4899999999998544 789999
Q ss_pred cccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCCCCCCCc
Q 035861 96 MEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYT 175 (332)
Q Consensus 96 ~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~~~~~~~ 175 (332)
|||++|+.+.........+++..+..++.|++.||+|||++|++|+||||+||+++.++.++|+|||++...........
T Consensus 75 ~ey~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 154 (316)
T cd05619 75 MEYLNGGDLMFHIQSCHKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDAKTC 154 (316)
T ss_pred EeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEccCCcceECCCCCCcee
Confidence 99998755554444467799999999999999999999999999999999999999999999999999875432222334
Q ss_pred cccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCCccccccc
Q 035861 176 SLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGAKANF 255 (332)
Q Consensus 176 ~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (332)
...|+..|+|||++.+ ..++.++|+||+|+++|+|++|..||...+..+....+......
T Consensus 155 ~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~~~------------------- 214 (316)
T cd05619 155 TFCGTPDYIAPEILLG-QKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIRMDNPC------------------- 214 (316)
T ss_pred eecCCccccCHHHHcC-CCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC-------------------
Confidence 4568999999999876 67899999999999999999999999887766555544322110
Q ss_pred cCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHH-HHhcCCCCCCCCCCCCC--CCCCCCCCc
Q 035861 256 AKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVD-DALNHYWFHEVPLPKSK--DFMPTFPPQ 327 (332)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~-ell~hp~f~~~~~~~~~--~~~~~~~~~ 327 (332)
.+..++.++++||.+||+.||++||++. ++++||||..+.+.... ...+++.|.
T Consensus 215 ------------------~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~h~~~~~~~~~~~~~~~~~~~~~~~ 271 (316)
T cd05619 215 ------------------YPRWLTREAKDILVKLFVREPERRLGVKGDIRQHPFFREIDWSALEEREIEPPFKPK 271 (316)
T ss_pred ------------------CCccCCHHHHHHHHHHhccCHhhcCCChHHHHcCcccCCCCHHHHHhCCCCCCcCCC
Confidence 0112688899999999999999999996 99999999998866442 234444443
No 85
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=9.7e-47 Score=336.69 Aligned_cols=290 Identities=38% Similarity=0.652 Sum_probs=221.5
Q ss_pred cccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCC--
Q 035861 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDH-- 89 (332)
Q Consensus 12 ~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-- 89 (332)
+|++++.||+|+||+||++.+..+++.||||.+......... ...+.+|+.+++.++|+||+.+++++....
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~------~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 74 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVS------CKRVFRELKMLCFFKHDNVLSALDILQPPHID 74 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHH------HHHHHHHHHHHHhCCCCCcCCHhheecCCCcc
Confidence 588999999999999999999989999999988543211111 124678999999999999999999985443
Q ss_pred --CeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeeccccccc
Q 035861 90 --DSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQY 167 (332)
Q Consensus 90 --~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~ 167 (332)
...|+|+||+++++...+.. ...+++..+..++.||+.||+|||+.|++|+||||+||+++.++.++|+|||++...
T Consensus 75 ~~~~~~lv~e~~~~~l~~~~~~-~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~ 153 (372)
T cd07853 75 PFEEIYVVTELMQSDLHKIIVS-PQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVE 153 (372)
T ss_pred ccceEEEEeeccccCHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEECCCCCEEeccccceeec
Confidence 26899999999887776654 668999999999999999999999999999999999999999999999999998765
Q ss_pred CCCC-CCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCC
Q 035861 168 GSPL-KPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLS 246 (332)
Q Consensus 168 ~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (332)
.... .......++..|+|||.+.+...++.++|+||||+++|+|++|..||...+..+....+....+.+....+....
T Consensus 154 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~ 233 (372)
T cd07853 154 EPDESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSAC 233 (372)
T ss_pred ccCccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhh
Confidence 3221 222344678899999999876668999999999999999999999999988888887777766554432211100
Q ss_pred CCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCC
Q 035861 247 ELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVP 313 (332)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~ 313 (332)
. ............ ..............++++.+||.+||+.||++|||+.|+|+||||....
T Consensus 234 ~--~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~~ 295 (372)
T cd07853 234 E--GARAHILRGPHK---PPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAHPYLDEGR 295 (372)
T ss_pred H--HHHHHHHhCCCC---CCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcCHhhCCCc
Confidence 0 000000000000 0000000112234688999999999999999999999999999999854
No 86
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=7.9e-47 Score=332.41 Aligned_cols=265 Identities=25% Similarity=0.392 Sum_probs=205.0
Q ss_pred cccccccccccCcEEEEEEEEC---CCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhC-CCCCeeeeeeeEEc
Q 035861 12 EFEKLNKISEGTYGIVYRARDK---KSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSF-DHPSIVNVKEVVMD 87 (332)
Q Consensus 12 ~y~~~~~lg~g~~g~v~~~~~~---~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~ 87 (332)
+|++++.||+|+||+||+++.. .+++.||+|++.......... ....+..|+.+++.+ .|++|+.+++.+ .
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~----~~~~~~~e~~~l~~l~~~~~i~~~~~~~-~ 75 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAK----TVEHTRTERNVLEHVRQSPFLVTLHYAF-Q 75 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhh----HHHHHHHHHHHHHhccCCCCcccEEEEE-e
Confidence 5899999999999999999864 478899999997543211111 111356789999999 589999999888 4
Q ss_pred CCCeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeeccccccc
Q 035861 88 DHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQY 167 (332)
Q Consensus 88 ~~~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~ 167 (332)
.....++||||++|+.+.........+++..+..++.||+.||+|||++|++|+||||+|||++.++.++|+|||++...
T Consensus 76 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~ 155 (332)
T cd05614 76 TEAKLHLILDYVSGGEMFTHLYQRDNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLDSEGHVVLTDFGLSKEF 155 (332)
T ss_pred cCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEECCCCCEEEeeCcCCccc
Confidence 44789999999997554444444678999999999999999999999999999999999999999999999999998754
Q ss_pred CCCCC-CCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCC
Q 035861 168 GSPLK-PYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLS 246 (332)
Q Consensus 168 ~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (332)
..... ......|+..|+|||.+.+...++.++||||||+++|+|++|..||...........+.....
T Consensus 156 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~----------- 224 (332)
T cd05614 156 LSEEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRIL----------- 224 (332)
T ss_pred cccCCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHh-----------
Confidence 32221 223456899999999998755678999999999999999999999964322111111111100
Q ss_pred CCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCC-----CHHHHhcCCCCCCCCC
Q 035861 247 ELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRI-----TVDDALNHYWFHEVPL 314 (332)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp-----s~~ell~hp~f~~~~~ 314 (332)
......++.++..+.+||.+||+.||++|| +++++++||||++..+
T Consensus 225 ----------------------~~~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~~~ 275 (332)
T cd05614 225 ----------------------KCDPPFPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEHPFFKGLDW 275 (332)
T ss_pred ----------------------cCCCCCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcCCCcCCCCH
Confidence 000111233788999999999999999999 8899999999998754
No 87
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=7.2e-47 Score=331.92 Aligned_cols=257 Identities=23% Similarity=0.383 Sum_probs=202.8
Q ss_pred ccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhC-CCCCeeeeeeeEEcCCCeEEEE
Q 035861 17 NKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSF-DHPSIVNVKEVVMDDHDSVYMV 95 (332)
Q Consensus 17 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~lv 95 (332)
+.||+|+||.||++.+..+++.||+|++........... ..+..|..++..+ +||||+.+++.+. +....|+|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~-----~~~~~e~~il~~~~~hp~Iv~~~~~~~-~~~~~~lv 74 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDI-----DWVQTEKHVFETASNHPFLVGLHSCFQ-TESRLFFV 74 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHH-----HHHHHHHHHHHhccCCCCCCceEEEEE-cCCEEEEE
Confidence 468999999999999999999999999976432221111 1355788888888 7999999999884 44789999
Q ss_pred cccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCCCCCCCc
Q 035861 96 MEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYT 175 (332)
Q Consensus 96 ~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~~~~~~~ 175 (332)
|||++|+.+.......+.+++..+..++.||+.||+|||++|++|+||||+||+++.++.++|+|||++...........
T Consensus 75 ~e~~~~g~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~~ 154 (329)
T cd05588 75 IEFVSGGDLMFHMQRQRKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGDTTS 154 (329)
T ss_pred EeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEECcCccccccccCCCccc
Confidence 99998755444444467899999999999999999999999999999999999999999999999999875322223334
Q ss_pred cccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChH--------HHHHHHHHHcCCCCCCcccCCCC
Q 035861 176 SLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEV--------DQIDKIFKTLGTPTETIWPGLSE 247 (332)
Q Consensus 176 ~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~ 247 (332)
...|+..|+|||++.+ ..++.++|+||||+++|+|++|..||...... +...+...
T Consensus 155 ~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~--------------- 218 (329)
T cd05588 155 TFCGTPNYIAPEILRG-EDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVIL--------------- 218 (329)
T ss_pred cccCCccccCHHHHcC-CCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHH---------------
Confidence 5678999999999987 67889999999999999999999999632111 01111100
Q ss_pred CccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCC------HHHHhcCCCCCCCCCCC
Q 035861 248 LPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRIT------VDDALNHYWFHEVPLPK 316 (332)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps------~~ell~hp~f~~~~~~~ 316 (332)
......+..++..+.+||.+||+.||.+|++ ++++++||||..+.+..
T Consensus 219 ---------------------~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~hp~~~~~~~~~ 272 (329)
T cd05588 219 ---------------------EKQIRIPRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSHPFFRNIDWDL 272 (329)
T ss_pred ---------------------cCCCCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcCCCCCCCCHHH
Confidence 0111122347889999999999999999997 78999999999876543
No 88
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=1.1e-46 Score=335.20 Aligned_cols=266 Identities=24% Similarity=0.323 Sum_probs=212.6
Q ss_pred cchhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEc
Q 035861 8 RSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMD 87 (332)
Q Consensus 8 ~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~ 87 (332)
...++|++.+.||+|+||.||++.+..+++.+|+|++.......... ...+.+|+.+++.++||||+++++.+.
T Consensus 40 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~-----~~~~~~e~~i~~~~~hp~iv~~~~~~~- 113 (370)
T cd05621 40 MKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSD-----SAFFWEERDIMAFANSPWVVQLFCAFQ- 113 (370)
T ss_pred CCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhh-----HHHHHHHHHHHHhCCCCCEeeEEEEEE-
Confidence 34579999999999999999999999999999999997533221111 113568999999999999999999984
Q ss_pred CCCeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeeccccccc
Q 035861 88 DHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQY 167 (332)
Q Consensus 88 ~~~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~ 167 (332)
+....|+||||++|+.+..+.. ...+++..+..++.||+.||+|||++||+||||||+||+++.++.+||+|||.+...
T Consensus 114 ~~~~~~lv~Ey~~gg~L~~~l~-~~~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~ 192 (370)
T cd05621 114 DDKYLYMVMEYMPGGDLVNLMS-NYDVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKM 192 (370)
T ss_pred cCCEEEEEEcCCCCCcHHHHHH-hcCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEEecccceec
Confidence 5588999999998754444444 346899999999999999999999999999999999999999999999999999865
Q ss_pred CCCCC-CCccccccccccchhhhcCC---CCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCccc
Q 035861 168 GSPLK-PYTSLVVTLWYRAPELLLGA---KKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWP 243 (332)
Q Consensus 168 ~~~~~-~~~~~~~~~~y~aPE~~~~~---~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (332)
..... ......||+.|+|||++... ..++.++|+||||+++|+|++|..||...+......++.......
T Consensus 193 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~~~~i~~~~~~~------ 266 (370)
T cd05621 193 DETGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSL------ 266 (370)
T ss_pred ccCCceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHHHHHHHhCCccc------
Confidence 43221 23456799999999998753 237889999999999999999999999887766666655421110
Q ss_pred CCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCC--CCCHHHHhcCCCCCCCC
Q 035861 244 GLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEK--RITVDDALNHYWFHEVP 313 (332)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~--Rps~~ell~hp~f~~~~ 313 (332)
..+....++..+++++.+||..++.+ |++++|+++||||+...
T Consensus 267 ---------------------------~~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~hp~~~~~~ 311 (370)
T cd05621 267 ---------------------------NFPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQHPFFKNDQ 311 (370)
T ss_pred ---------------------------CCCCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcCcccCCCC
Confidence 01111237889999999999866544 89999999999999844
No 89
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=1.2e-46 Score=329.58 Aligned_cols=271 Identities=27% Similarity=0.432 Sum_probs=215.4
Q ss_pred cccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCC-CCeeeeeeeEEcCCC
Q 035861 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDH-PSIVNVKEVVMDDHD 90 (332)
Q Consensus 12 ~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h-~~i~~~~~~~~~~~~ 90 (332)
+|++.+.||+|+||+||+|.+..+++.||+|++........... ..+..|..++..+.| ++|+.+++.+ ....
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~-----~~~~~e~~~l~~~~~~~~i~~~~~~~-~~~~ 74 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDV-----ECTMVEKRVLALQDKPPFLTQLHSCF-QTVD 74 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHH-----HHHHHHHHHHHhccCCCchhheeeEE-ecCC
Confidence 47889999999999999999999999999999976432211111 134578888888854 6677787777 4447
Q ss_pred eEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCCC
Q 035861 91 SVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSP 170 (332)
Q Consensus 91 ~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~~ 170 (332)
..|+||||++|+.+.......+.+++..+..++.||+.||+|||++|++|+||||+||+++.++.++|+|||++......
T Consensus 75 ~~~lv~Ey~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~ 154 (323)
T cd05615 75 RLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVD 154 (323)
T ss_pred EEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeccccccccCCC
Confidence 89999999987655555555678999999999999999999999999999999999999999999999999998754332
Q ss_pred CCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCCcc
Q 035861 171 LKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPG 250 (332)
Q Consensus 171 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (332)
........|+..|+|||++.+ ..++.++|+||||+++|+|++|..||...+.......+......
T Consensus 155 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~~~-------------- 219 (323)
T cd05615 155 GVTTRTFCGTPDYIAPEIIAY-QPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVS-------------- 219 (323)
T ss_pred CccccCccCCccccCHHHHcC-CCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC--------------
Confidence 223344568999999999876 67899999999999999999999999988776666655442111
Q ss_pred ccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCC-----HHHHhcCCCCCCCCCCCCC--CCCCC
Q 035861 251 AKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRIT-----VDDALNHYWFHEVPLPKSK--DFMPT 323 (332)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps-----~~ell~hp~f~~~~~~~~~--~~~~~ 323 (332)
.+..++.++.+|+.+||+.+|.+|++ .+++++||||..+.+.... ...++
T Consensus 220 -----------------------~p~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~f~~~~~~~~~~~~~~~~ 276 (323)
T cd05615 220 -----------------------YPKSLSKEAVSICKGLMTKHPSKRLGCGPEGERDIREHAFFRRIDWDKLENREIQPP 276 (323)
T ss_pred -----------------------CCccCCHHHHHHHHHHcccCHhhCCCCCCCCHHHHhcCcccCCCCHHHHhcCCCCcC
Confidence 11236888999999999999999997 5799999999998865442 23444
Q ss_pred CCC
Q 035861 324 FPP 326 (332)
Q Consensus 324 ~~~ 326 (332)
+.|
T Consensus 277 ~~~ 279 (323)
T cd05615 277 FKP 279 (323)
T ss_pred ccC
Confidence 444
No 90
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-46 Score=327.29 Aligned_cols=262 Identities=35% Similarity=0.539 Sum_probs=226.9
Q ss_pred chhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCC-CCCeeeeeeeEEc
Q 035861 9 SVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFD-HPSIVNVKEVVMD 87 (332)
Q Consensus 9 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~ 87 (332)
.-..|++.+.||.|.||.||+++.+.||+.+|+|++.+......... ..+.+|+.+|+++. ||||+.+++.+ +
T Consensus 33 ~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~-----~~v~~Ev~il~~l~~hpniv~l~~~~-e 106 (382)
T KOG0032|consen 33 IKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDR-----EDVRREVAILQQLSGHPNIVQLKDAF-E 106 (382)
T ss_pred ccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccH-----HHHHHHHHHHHhccCCCCEEEEEEEE-E
Confidence 34479999999999999999999999999999999988766443311 24679999999998 99999999999 5
Q ss_pred CCCeEEEEcccccc-cHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCC----CcEEEeecc
Q 035861 88 DHDSVYMVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQ----GVLKICDFG 162 (332)
Q Consensus 88 ~~~~~~lv~e~~~~-~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~----~~~~l~df~ 162 (332)
+...+++|||+|.| .+.+.+... .+++..+..++.|++.+++|||+.|++|+||||+|+|+... +.++++|||
T Consensus 107 ~~~~~~lvmEL~~GGeLfd~i~~~--~~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFG 184 (382)
T KOG0032|consen 107 DPDSVYLVMELCEGGELFDRIVKK--HYSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDEGSGRIKLIDFG 184 (382)
T ss_pred cCCeEEEEEEecCCchHHHHHHHc--cCCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccCCCCcEEEeeCC
Confidence 55789999999996 566666654 49999999999999999999999999999999999999643 479999999
Q ss_pred cccccCCCCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcc
Q 035861 163 MSRQYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIW 242 (332)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 242 (332)
++..... .......+||+.|+|||++.. ..++...|+||+|+++|.|++|..||.+.+.......+......
T Consensus 185 la~~~~~-~~~~~~~~Gtp~y~APEvl~~-~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~~~~------ 256 (382)
T KOG0032|consen 185 LAKFIKP-GERLHTIVGTPEYVAPEVLGG-RPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILRGDFD------ 256 (382)
T ss_pred CceEccC-CceEeeecCCccccCchhhcC-CCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHcCCCC------
Confidence 9998765 556778899999999999986 68999999999999999999999999999988888877665332
Q ss_pred cCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCC
Q 035861 243 PGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVP 313 (332)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~ 313 (332)
+..+.++.++..+++||+.||..||..|+++.++|+|||+....
T Consensus 257 ---------------------------f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~HpWi~~~~ 300 (382)
T KOG0032|consen 257 ---------------------------FTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQHPWIKSIG 300 (382)
T ss_pred ---------------------------CCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhcCccccCCc
Confidence 23334555899999999999999999999999999999998864
No 91
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=5.1e-47 Score=337.03 Aligned_cols=269 Identities=27% Similarity=0.393 Sum_probs=215.0
Q ss_pred hcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCC
Q 035861 11 FEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHD 90 (332)
Q Consensus 11 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 90 (332)
++|++++.||+|+||+||++.+..+++.||+|++......... ....+..|+.++..++|++|+++++.+ .+..
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~-----~~~~~~~e~~~l~~l~~~~iv~~~~~~-~~~~ 74 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKE-----QVAHIRAERDILVEADGAWVVKMFYSF-QDKR 74 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhh-----hHHHHHHHHHHHHhCCCCCEeeEEEEE-EcCC
Confidence 4799999999999999999999999999999999754321111 112456799999999999999999988 4558
Q ss_pred eEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCCC
Q 035861 91 SVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSP 170 (332)
Q Consensus 91 ~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~~ 170 (332)
..|+||||++|+.+.......+.+++..+..++.|++.||+|||++||+|+||||+||+++.++.++|+|||++......
T Consensus 75 ~~~lv~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~ 154 (360)
T cd05627 75 NLYLIMEFLPGGDMMTLLMKKDTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKA 154 (360)
T ss_pred EEEEEEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEeeccCCcccccc
Confidence 89999999997655555555678999999999999999999999999999999999999999999999999988643211
Q ss_pred C-----------------------------------CCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCC
Q 035861 171 L-----------------------------------KPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKK 215 (332)
Q Consensus 171 ~-----------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~ 215 (332)
. .......||+.|+|||++.+ ..++.++|+||||+++|+|++|.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~-~~~~~~~DiwSlGvilyel~tG~ 233 (360)
T cd05627 155 HRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQ-TGYNKLCDWWSLGVIMYEMLIGY 233 (360)
T ss_pred cccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcC-CCCCCcceeccccceeeecccCC
Confidence 0 00113468999999999987 67899999999999999999999
Q ss_pred CCCCCCChHHHHHHHHHHcCCCCCCcccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCC
Q 035861 216 PLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPE 295 (332)
Q Consensus 216 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~ 295 (332)
.||...+.......+...... ...+....++.++++||.+|+. ||.
T Consensus 234 ~Pf~~~~~~~~~~~i~~~~~~---------------------------------~~~p~~~~~s~~~~~li~~l~~-~p~ 279 (360)
T cd05627 234 PPFCSETPQETYRKVMNWKET---------------------------------LVFPPEVPISEKAKDLILRFCT-DSE 279 (360)
T ss_pred CCCCCCCHHHHHHHHHcCCCc---------------------------------eecCCCCCCCHHHHHHHHHhcc-Chh
Confidence 999888777666655432100 0011112268899999999875 999
Q ss_pred CCC---CHHHHhcCCCCCCCCCCCCCCC
Q 035861 296 KRI---TVDDALNHYWFHEVPLPKSKDF 320 (332)
Q Consensus 296 ~Rp---s~~ell~hp~f~~~~~~~~~~~ 320 (332)
+|+ +++++++||||.+++|......
T Consensus 280 ~R~~~~~~~ei~~hp~f~~~~~~~~~~~ 307 (360)
T cd05627 280 NRIGSNGVEEIKSHPFFEGVDWGHIRER 307 (360)
T ss_pred hcCCCCCHHHHhcCCCCCCCCHHHHhcC
Confidence 998 4899999999999887665443
No 92
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=4.6e-46 Score=327.19 Aligned_cols=296 Identities=24% Similarity=0.367 Sum_probs=216.7
Q ss_pred hhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCC
Q 035861 10 VFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDH 89 (332)
Q Consensus 10 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 89 (332)
.++|++++.||+|++|.||++++..++..+|+|++....... ....+.+|++++++++||||+++++.+..+
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~-------~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~- 75 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPA-------IRNQIIRELQVLHECNSPYIVGFYGAFYSD- 75 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHH-------HHHHHHHHHHHHHHCCCCCCCeEEEEEEEC-
Confidence 468999999999999999999999999999999987542111 112467899999999999999999998554
Q ss_pred CeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC-CcccccCCCCCEEEcCCCcEEEeecccccccC
Q 035861 90 DSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDN-WVLHRDLKTSNLLLNNQGVLKICDFGMSRQYG 168 (332)
Q Consensus 90 ~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~-~i~H~di~p~Nili~~~~~~~l~df~~~~~~~ 168 (332)
...++||||++|+.+..+......+++..+..++.|++.||+|||+. +++|+||||+||+++.++.++|+|||.+....
T Consensus 76 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 155 (331)
T cd06649 76 GEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI 155 (331)
T ss_pred CEEEEEeecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCCCcEEEccCccccccc
Confidence 78999999999866665555567899999999999999999999986 69999999999999999999999999987653
Q ss_pred CCCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCC
Q 035861 169 SPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSEL 248 (332)
Q Consensus 169 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (332)
.. ......|+..|+|||.+.+ ..++.++|+||||+++|+|++|+.||......+....+..................
T Consensus 156 ~~--~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (331)
T cd06649 156 DS--MANSFVGTRSYMSPERLQG-THYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSISPR 232 (331)
T ss_pred cc--ccccCCCCcCcCCHhHhcC-CCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccccCCccccCcc
Confidence 32 2234568899999999987 66899999999999999999999999876654432221111000000000001000
Q ss_pred ccc------cccccCCc----hhhhhhhCC-CCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCCCCC
Q 035861 249 PGA------KANFAKQP----YNLLRKRFP-AASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVPLPK 316 (332)
Q Consensus 249 ~~~------~~~~~~~~----~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~~ 316 (332)
... ........ ......... .........+++++++||.+||+.||++||++++|++||||+......
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~~~~~~~~~~ 311 (331)
T cd06649 233 PRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHTFIKRSEVEE 311 (331)
T ss_pred cccccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcChHHhhccccc
Confidence 000 00000000 000000000 111112234788999999999999999999999999999999876543
No 93
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=8.7e-46 Score=321.06 Aligned_cols=293 Identities=45% Similarity=0.835 Sum_probs=230.5
Q ss_pred cccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCCe
Q 035861 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHDS 91 (332)
Q Consensus 12 ~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 91 (332)
+|++++.||.|++|.||+|.+..+++.|++|.+.......... .....+..|+..+++++|+||+++++++.+ ...
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~---~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~ 76 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKD---GINFTALREIKLLQELKHPNIIGLLDVFGH-KSN 76 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccc---hhhHHHHHHHHHHhhcCCCCChhhhheeec-CCE
Confidence 4889999999999999999999899999999997654331111 112245679999999999999999999955 578
Q ss_pred EEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCCCC
Q 035861 92 VYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPL 171 (332)
Q Consensus 92 ~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~~~ 171 (332)
.++||||+.|++...+......+++..+..++.||+.||+|||++|++|+||+|+||+++.++.++|+|||.+.......
T Consensus 77 ~~lv~e~~~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~ 156 (298)
T cd07841 77 INLVFEFMETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIASDGVLKLADFGLARSFGSPN 156 (298)
T ss_pred EEEEEcccCCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEEcCCCCEEEccceeeeeccCCC
Confidence 99999999777766665533479999999999999999999999999999999999999999999999999998765443
Q ss_pred CCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCCccc
Q 035861 172 KPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGA 251 (332)
Q Consensus 172 ~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (332)
.......++..|+|||.+.+...++.++|+||||+++|++++|..||......+...++....+.+....++........
T Consensus 157 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (298)
T cd07841 157 RKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLPDY 236 (298)
T ss_pred ccccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhccccccc
Confidence 33444456788999999876567899999999999999999998888888877777777766665555554443333221
Q ss_pred cccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCCCCCC
Q 035861 252 KANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVPLPKS 317 (332)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~~~ 317 (332)
.......... ........+..+.+||.+||++||++||++.|+++||||.+...+..
T Consensus 237 ~~~~~~~~~~---------~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~~~~~~~~~~~~ 293 (298)
T cd07841 237 VEFKPFPPTP---------LKQIFPAASDDALDLLQRLLTLNPNKRITARQALEHPYFSNDPAPTP 293 (298)
T ss_pred ccccccCCcc---------hhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhCccccCCCCCCC
Confidence 1111111100 01112346788999999999999999999999999999999887764
No 94
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=2.5e-46 Score=343.10 Aligned_cols=290 Identities=24% Similarity=0.354 Sum_probs=214.3
Q ss_pred hhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCC------CCCeeeeee
Q 035861 10 VFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFD------HPSIVNVKE 83 (332)
Q Consensus 10 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~ 83 (332)
.++|++++.||+|+||+||+|.+..+++.||||++....... .....|+.++..+. |.+++.+++
T Consensus 128 ~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~~~---------~~~~~e~~~l~~l~~~~~~~~~~i~~i~~ 198 (467)
T PTZ00284 128 TQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPKYT---------RDAKIEIQFMEKVRQADPADRFPLMKIQR 198 (467)
T ss_pred CCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecchhhH---------HHHHHHHHHHHHHhhcCcccCcceeeeEE
Confidence 368999999999999999999999999999999996422111 02234666665554 445888888
Q ss_pred eEEcCCCeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH-CCcccccCCCCCEEEcCCC--------
Q 035861 84 VVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHD-NWVLHRDLKTSNLLLNNQG-------- 154 (332)
Q Consensus 84 ~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~-~~i~H~di~p~Nili~~~~-------- 154 (332)
++..+...+|+||+++++++++.+.. .+.+++..+..++.||+.||+|||+ .||+|+||||+|||++.++
T Consensus 199 ~~~~~~~~~~iv~~~~g~~l~~~l~~-~~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~ 277 (467)
T PTZ00284 199 YFQNETGHMCIVMPKYGPCLLDWIMK-HGPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVTN 277 (467)
T ss_pred EEEcCCceEEEEEeccCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCcccccccc
Confidence 88666678999999998888887765 5789999999999999999999997 5999999999999998765
Q ss_pred --------cEEEeecccccccCCCCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 035861 155 --------VLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQ 226 (332)
Q Consensus 155 --------~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~ 226 (332)
.+||+|||.+.... .......||+.|+|||++.+ ..++.++|||||||++|+|++|+.||...+..+.
T Consensus 278 ~~~~~~~~~vkl~DfG~~~~~~---~~~~~~~gt~~Y~APE~~~~-~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~ 353 (467)
T PTZ00284 278 RALPPDPCRVRICDLGGCCDER---HSRTAIVSTRHYRSPEVVLG-LGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEH 353 (467)
T ss_pred cccCCCCceEEECCCCccccCc---cccccccCCccccCcHHhhc-CCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH
Confidence 49999999876432 22345678999999999987 6789999999999999999999999998888877
Q ss_pred HHHHHHHcCCCCCCcccCCCCCcc-----ccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHH
Q 035861 227 IDKIFKTLGTPTETIWPGLSELPG-----AKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVD 301 (332)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ 301 (332)
...+....+..+..+...+..... ............................++.+.+||.+||++||.+|||++
T Consensus 354 ~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~ 433 (467)
T PTZ00284 354 LHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNAR 433 (467)
T ss_pred HHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHH
Confidence 777777766665443321110000 000000000000000000000000111356788999999999999999999
Q ss_pred HHhcCCCCCCCC
Q 035861 302 DALNHYWFHEVP 313 (332)
Q Consensus 302 ell~hp~f~~~~ 313 (332)
|+|+||||.+..
T Consensus 434 e~L~Hp~~~~~~ 445 (467)
T PTZ00284 434 QMTTHPYVLKYY 445 (467)
T ss_pred HHhcCccccccC
Confidence 999999999854
No 95
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=5.5e-47 Score=333.08 Aligned_cols=256 Identities=27% Similarity=0.422 Sum_probs=204.3
Q ss_pred ccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhC---CCCCeeeeeeeEEcCCCeEEEE
Q 035861 19 ISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSF---DHPSIVNVKEVVMDDHDSVYMV 95 (332)
Q Consensus 19 lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l---~h~~i~~~~~~~~~~~~~~~lv 95 (332)
||+|+||+||+|++..+++.||+|++........... .....|..++..+ .||+|+.++..+.. ....|+|
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~-----~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~-~~~~~lv 74 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEV-----AHTIGERNILVRTLLDESPFIVGLKFSFQT-DSDLYLV 74 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHH-----HHHHHHHHHHHHhccCCCCcCcceEEEEec-CCeEEEE
Confidence 7999999999999999999999999975432211111 1233566666554 69999999998844 4789999
Q ss_pred cccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCCCCCCCc
Q 035861 96 MEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYT 175 (332)
Q Consensus 96 ~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~~~~~~~ 175 (332)
|||++|+.+.......+.+++..++.++.||+.||+|||++||+|+||||+||+++.++.++|+|||++...........
T Consensus 75 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~~ 154 (330)
T cd05586 75 TDYMSGGELFWHLQKEGRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDATGHIALCDFGLSKANLTDNKTTN 154 (330)
T ss_pred EcCCCCChHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCCCcc
Confidence 99998765544444577899999999999999999999999999999999999999999999999999875433333344
Q ss_pred cccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCCccccccc
Q 035861 176 SLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGAKANF 255 (332)
Q Consensus 176 ~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (332)
...|+..|+|||++.+...++.++|+||||+++|+|++|..||...+..+....+.......+
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~----------------- 217 (330)
T cd05586 155 TFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAFGKVRFP----------------- 217 (330)
T ss_pred CccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHHHHcCCCCCC-----------------
Confidence 567899999999997655689999999999999999999999988776665555433211110
Q ss_pred cCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCC----CHHHHhcCCCCCCCCCCC
Q 035861 256 AKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRI----TVDDALNHYWFHEVPLPK 316 (332)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp----s~~ell~hp~f~~~~~~~ 316 (332)
...++.++.+||.+||+.||.+|| +++++++||||.+..+..
T Consensus 218 -------------------~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~h~~~~~~~~~~ 263 (330)
T cd05586 218 -------------------KNVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKEHPFFADIDWDL 263 (330)
T ss_pred -------------------CccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhcCccccCCCHHH
Confidence 112688999999999999999998 799999999999876443
No 96
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=1.5e-45 Score=319.02 Aligned_cols=290 Identities=45% Similarity=0.843 Sum_probs=229.4
Q ss_pred hhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCC
Q 035861 10 VFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDH 89 (332)
Q Consensus 10 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 89 (332)
+++|++.+.||.|++|+||+|.+..+++.||+|.+........ ....+.+|+..+++++|+|++++++.+.. .
T Consensus 1 ~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~------~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~ 73 (294)
T PLN00009 1 MDQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEG------VPSTAIREISLLKEMQHGNIVRLQDVVHS-E 73 (294)
T ss_pred CCceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhcccccc------chHHHHHHHHHHHhccCCCEeeEEEEEec-C
Confidence 4689999999999999999999998999999999865432111 11245689999999999999999999954 4
Q ss_pred CeEEEEcccccccHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcC-CCcEEEeeccccccc
Q 035861 90 DSVYMVMEYMEHDLKWLMESMKQ-PFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNN-QGVLKICDFGMSRQY 167 (332)
Q Consensus 90 ~~~~lv~e~~~~~l~~~~~~~~~-~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~-~~~~~l~df~~~~~~ 167 (332)
...++||||+++++...+..... .+++..++.++.||+.||+|||++|++|+||+|+||+++. ++.++|+|||.+...
T Consensus 74 ~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~ 153 (294)
T PLN00009 74 KRLYLVFEYLDLDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAF 153 (294)
T ss_pred CeEEEEEecccccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEECCCCEEEEccccccccc
Confidence 78999999999988777765433 3688899999999999999999999999999999999985 457999999999765
Q ss_pred CCCCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCC
Q 035861 168 GSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSE 247 (332)
Q Consensus 168 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (332)
...........++..|+|||.+.+...++.++|+||+|+++|+++||..||......+...++....+.+....+.+...
T Consensus 154 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (294)
T PLN00009 154 GIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTS 233 (294)
T ss_pred CCCccccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhcccccc
Confidence 43333334446688899999987756789999999999999999999999998888888888877777776666655444
Q ss_pred CccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCCC
Q 035861 248 LPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVPL 314 (332)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~ 314 (332)
++......... .........+.+++++.++|.+||+.+|++||+++++++||||.++..
T Consensus 234 ~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~~~~~~~~~ 292 (294)
T PLN00009 234 LPDYKSAFPKW--------PPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEHEYFKDLGD 292 (294)
T ss_pred chhhhhhcccC--------CCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcCchHhHHhc
Confidence 33321111100 001111123447889999999999999999999999999999998653
No 97
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=1.5e-45 Score=318.49 Aligned_cols=285 Identities=41% Similarity=0.785 Sum_probs=221.4
Q ss_pred chhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcC
Q 035861 9 SVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDD 88 (332)
Q Consensus 9 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 88 (332)
.+++|++.+.||.|++|.||+|++..+++.|++|.+........ ...+.+|+.+++.++|+||+++++++. +
T Consensus 3 ~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~-------~~~~~~E~~~l~~l~h~~i~~~~~~~~-~ 74 (291)
T cd07844 3 KLETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGA-------PFTAIREASLLKDLKHANIVTLHDIIH-T 74 (291)
T ss_pred CccceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCC-------chhHHHHHHHHhhCCCcceeeEEEEEe-c
Confidence 45789999999999999999999998999999999875432211 113468999999999999999999985 4
Q ss_pred CCeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccC
Q 035861 89 HDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYG 168 (332)
Q Consensus 89 ~~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~ 168 (332)
....++||||+++++.+.+......+++..++.++.|++.||.|||++|++|+||+|+||+++.++.++|+|||.+....
T Consensus 75 ~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~ 154 (291)
T cd07844 75 KKTLTLVFEYLDTDLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLISERGELKLADFGLARAKS 154 (291)
T ss_pred CCeEEEEEecCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEEcCCCCEEECccccccccC
Confidence 47899999999998888777666788999999999999999999999999999999999999999999999999987654
Q ss_pred CCCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC-hHHHHHHHHHHcCCCCCCcccCCCC
Q 035861 169 SPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTT-EVDQIDKIFKTLGTPTETIWPGLSE 247 (332)
Q Consensus 169 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (332)
..........++..|+|||.+.+...++.++|+||+|+++|+|++|..||.... ..+....+.+....+....++....
T Consensus 155 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (291)
T cd07844 155 VPSKTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSS 234 (291)
T ss_pred CCCccccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhh
Confidence 332333334567889999998765668899999999999999999999997765 4455555666555555555444432
Q ss_pred CccccccccC-CchhhhhhhCCCCccCCCCCCC--chHHHHHHHhcCCCCCCCCCHHHHhcCCCC
Q 035861 248 LPGAKANFAK-QPYNLLRKRFPAASFTGSPVLS--ESGFDLLNRLLTYDPEKRITVDDALNHYWF 309 (332)
Q Consensus 248 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~li~~~l~~dp~~Rps~~ell~hp~f 309 (332)
.......... ......... .+.++ ..+.+++.+||+.+|++||++.++++||||
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~~~f 291 (291)
T cd07844 235 NPEFKPYSFPFYPPRPLINH--------APRLDRIPHGEELALKFLQYEPKKRISAAEAMKHPYF 291 (291)
T ss_pred ccccccccccccCChhHHHh--------CcCCCCchhHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence 2211111100 000001111 11233 788899999999999999999999999998
No 98
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=9e-46 Score=318.77 Aligned_cols=282 Identities=46% Similarity=0.893 Sum_probs=225.7
Q ss_pred cccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCCe
Q 035861 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHDS 91 (332)
Q Consensus 12 ~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 91 (332)
+|++.+.||.|++|+||+|++..++..||||++........ ...+.+|+.++++++|+|++++++.+... ..
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~-------~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-~~ 72 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGT-------PSTAIREISLMKELKHENIVRLHDVIHTE-NK 72 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccc-------hHHHHHHHHHHHhhcCCCEeeeeeeEeeC-Cc
Confidence 58999999999999999999999999999999976432211 12456899999999999999999999555 77
Q ss_pred EEEEcccccccHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCC
Q 035861 92 VYMVMEYMEHDLKWLMESMK--QPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGS 169 (332)
Q Consensus 92 ~~lv~e~~~~~l~~~~~~~~--~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~ 169 (332)
.++|+||+++++.+.+.... ..+++..+..++.|++.||+|||+.|++|+||+|+||+++.++.++|+|||.+.....
T Consensus 73 ~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~ 152 (284)
T cd07836 73 LMLVFEYMDKDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLINKRGELKLADFGLARAFGI 152 (284)
T ss_pred EEEEEecCCccHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCcEEEeecchhhhhcC
Confidence 89999999998877766543 5689999999999999999999999999999999999999999999999999876544
Q ss_pred CCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCCc
Q 035861 170 PLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELP 249 (332)
Q Consensus 170 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (332)
.........++..|+|||.+.+...++.++|+||||+++|++++|..||...+..+...++......+....+..+...+
T Consensus 153 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (284)
T cd07836 153 PVNTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLP 232 (284)
T ss_pred CccccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCc
Confidence 33333445567889999998775667899999999999999999999999888888778777776666555554444332
Q ss_pred cccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCC
Q 035861 250 GAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWF 309 (332)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f 309 (332)
................ ..+.++..++++|.+||+.||.+||+++++++||||
T Consensus 233 ~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~f 284 (284)
T cd07836 233 EYKPTFPRYPPQDLQQ--------LFPHADPLGIDLLHRLLQLNPELRISAHDALQHPWF 284 (284)
T ss_pred hhcccccCCChHHHHH--------HhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence 2221111111111111 112368889999999999999999999999999998
No 99
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=1.5e-46 Score=329.75 Aligned_cols=259 Identities=25% Similarity=0.411 Sum_probs=201.9
Q ss_pred ccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhC-CCCCeeeeeeeEEcCCCeEEEE
Q 035861 17 NKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSF-DHPSIVNVKEVVMDDHDSVYMV 95 (332)
Q Consensus 17 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~lv 95 (332)
+.||+|+||+||++.+..+++.+|+|++........... ..+..|+.++.++ +||||+.+++.+.. ....++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~-----~~~~~E~~~l~~~~~hp~iv~~~~~~~~-~~~~~lv 74 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDI-----DWVQTEKHVFEQASNHPFLVGLHSCFQT-ESRLFFV 74 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHH-----HHHHHHHHHHHhcCCCCcCCceeeEEEe-CCEEEEE
Confidence 469999999999999999999999999986533221111 1345788887766 89999999998844 4789999
Q ss_pred cccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCCCCCCCc
Q 035861 96 MEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYT 175 (332)
Q Consensus 96 ~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~~~~~~~ 175 (332)
|||++|+.+.......+.+++..++.++.||+.||+|||++|++|+||||+||+++.++.++|+|||++...........
T Consensus 75 ~E~~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~~~~ 154 (329)
T cd05618 75 IEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTS 154 (329)
T ss_pred EeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCCEEEeeCCccccccCCCCccc
Confidence 99999765555555567899999999999999999999999999999999999999999999999999875433333334
Q ss_pred cccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChH-----HHHHHHHHHcCCCCCCcccCCCCCcc
Q 035861 176 SLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEV-----DQIDKIFKTLGTPTETIWPGLSELPG 250 (332)
Q Consensus 176 ~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (332)
...|+..|+|||++.+ ..++.++|+||||+++|+|++|..||...... .....+...
T Consensus 155 ~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~----------------- 216 (329)
T cd05618 155 TFCGTPNYIAPEILRG-EDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQV----------------- 216 (329)
T ss_pred cccCCccccCHHHHcC-CCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHH-----------------
Confidence 5678999999999987 67889999999999999999999999531100 000000000
Q ss_pred ccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCC------HHHHhcCCCCCCCCCC
Q 035861 251 AKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRIT------VDDALNHYWFHEVPLP 315 (332)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps------~~ell~hp~f~~~~~~ 315 (332)
........+..++..+.+||.+||+.||++||+ +.++++||||.++.+.
T Consensus 217 ----------------i~~~~~~~p~~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~hp~f~~~~~~ 271 (329)
T cd05618 217 ----------------ILEKQIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWD 271 (329)
T ss_pred ----------------HhcCCCCCCCCCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcCCCCCCCCHH
Confidence 000011122347888999999999999999998 5899999999988753
No 100
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=3.4e-46 Score=329.80 Aligned_cols=288 Identities=34% Similarity=0.573 Sum_probs=221.8
Q ss_pred chhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcC
Q 035861 9 SVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDD 88 (332)
Q Consensus 9 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 88 (332)
..++|++++.||.|+||+||+|.+..+++.||||++......... ...+.+|+.++++++|+||+++++++...
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~------~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 86 (343)
T cd07878 13 VPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIH------ARRTYRELRLLKHMKHENVIGLLDVFTPA 86 (343)
T ss_pred hhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHH------HHHHHHHHHHHHhcCCCchhhhhhhhccc
Confidence 456899999999999999999999999999999998653221111 11356899999999999999999887432
Q ss_pred -----CCeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeeccc
Q 035861 89 -----HDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGM 163 (332)
Q Consensus 89 -----~~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~ 163 (332)
....|++++++++++...+. ...+++..+..++.||+.||+|||++||+|+||||+||+++.++.++|+|||+
T Consensus 87 ~~~~~~~~~~~~~~~~~~~l~~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~ 164 (343)
T cd07878 87 TSIENFNEVYLVTNLMGADLNNIVK--CQKLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGL 164 (343)
T ss_pred ccccccCcEEEEeecCCCCHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEECCCCCEEEcCCcc
Confidence 13478999999887765543 45799999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCccc
Q 035861 164 SRQYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWP 243 (332)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (332)
+...... .....++..|+|||++.+...++.++|+||||+++|+|++|..||...+..+....+....+.+......
T Consensus 165 ~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (343)
T cd07878 165 ARQADDE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLK 241 (343)
T ss_pred ceecCCC---cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHHHH
Confidence 8865432 2345688999999999875678999999999999999999999999888777777776655544433222
Q ss_pred CCCCCccccccccCCchhhhhhhCCCCc----cCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCCCCCC
Q 035861 244 GLSELPGAKANFAKQPYNLLRKRFPAAS----FTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVPLPKS 317 (332)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~~~ 317 (332)
.+...... .....++... .......++.+.+||.+||..||.+|||+.|+|+||||..+..+..
T Consensus 242 ~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~hp~~~~~~~~~~ 309 (343)
T cd07878 242 KISSEHAR----------KYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAHPYFSQYHDPED 309 (343)
T ss_pred hcchhhHH----------HHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhccCCCcc
Confidence 11110000 0000000000 0011235677899999999999999999999999999999776553
No 101
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=3.4e-46 Score=332.25 Aligned_cols=280 Identities=24% Similarity=0.317 Sum_probs=218.6
Q ss_pred ccchhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEE
Q 035861 7 CRSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVM 86 (332)
Q Consensus 7 ~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~ 86 (332)
....++|++.+.||+|+||.||++.+..+++.+|+|++.......... ...+.+|+.+++.++||||+++++.+.
T Consensus 39 ~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~-----~~~~~~e~~i~~~~~hp~iv~~~~~~~ 113 (371)
T cd05622 39 RMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSD-----SAFFWEERDIMAFANSPWVVQLFYAFQ 113 (371)
T ss_pred CcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHH-----HHHHHHHHHHHHhCCCCCCCeEEEEEE
Confidence 344579999999999999999999999999999999987533211111 113568899999999999999999984
Q ss_pred cCCCeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccc
Q 035861 87 DDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQ 166 (332)
Q Consensus 87 ~~~~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~ 166 (332)
+....++||||++|+.+..+.. ...+++..+..++.||+.||+|||++||+|+||||+||+++.++.++|+|||++..
T Consensus 114 -~~~~~~lv~Ey~~gg~L~~~~~-~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll~~~~~ikL~DfG~a~~ 191 (371)
T cd05622 114 -DDRYLYMVMEYMPGGDLVNLMS-NYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMK 191 (371)
T ss_pred -cCCEEEEEEcCCCCCcHHHHHH-hcCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEECCCCCEEEEeCCceeE
Confidence 4588999999998765554444 34689999999999999999999999999999999999999999999999999876
Q ss_pred cCCCC-CCCccccccccccchhhhcCC---CCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcc
Q 035861 167 YGSPL-KPYTSLVVTLWYRAPELLLGA---KKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIW 242 (332)
Q Consensus 167 ~~~~~-~~~~~~~~~~~y~aPE~~~~~---~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 242 (332)
..... .......||+.|+|||++... ..++.++|+||||+++|+|++|..||...+.......+.......
T Consensus 192 ~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~----- 266 (371)
T cd05622 192 MNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSL----- 266 (371)
T ss_pred cCcCCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCcc-----
Confidence 54322 223456789999999998753 237889999999999999999999999888776666665421110
Q ss_pred cCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCC--CCCHHHHhcCCCCCCCC--CCCCC
Q 035861 243 PGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEK--RITVDDALNHYWFHEVP--LPKSK 318 (332)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~--Rps~~ell~hp~f~~~~--~~~~~ 318 (332)
.......++..+++||.+||..++.+ |++++++++||||++.. +...+
T Consensus 267 ----------------------------~~~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~~~~~~~~~~~~~~ 318 (371)
T cd05622 267 ----------------------------TFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKNDQWAWETLR 318 (371)
T ss_pred ----------------------------cCCCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCcccCCCChhHHhcC
Confidence 01112347899999999999854443 78999999999998844 33444
Q ss_pred CCCCCCCC
Q 035861 319 DFMPTFPP 326 (332)
Q Consensus 319 ~~~~~~~~ 326 (332)
...++..|
T Consensus 319 ~~~~~~~~ 326 (371)
T cd05622 319 DTVAPVVP 326 (371)
T ss_pred CCCCCCCC
Confidence 44444433
No 102
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=1.7e-45 Score=318.20 Aligned_cols=287 Identities=37% Similarity=0.683 Sum_probs=221.5
Q ss_pred hhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCC
Q 035861 10 VFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDH 89 (332)
Q Consensus 10 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 89 (332)
..+|.+.+.||+|++|.||+|.+..++..|++|++........ ...+.+|+..++.++|+||+.+.+++.. .
T Consensus 4 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~-------~~~~~~e~~~l~~l~h~ni~~~~~~~~~-~ 75 (291)
T cd07870 4 ATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGV-------PFTAIREASLLKGLKHANIVLLHDIIHT-K 75 (291)
T ss_pred cceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCC-------cHHHHHHHHHHHhcCCCCEeEEEEEEec-C
Confidence 4689999999999999999999999999999999865432211 1135689999999999999999999854 4
Q ss_pred CeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCC
Q 035861 90 DSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGS 169 (332)
Q Consensus 90 ~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~ 169 (332)
...++|+||+.++++..+......+++..+..++.|++.||+|||+.|++|+||+|+||+++.++.++|+|||.+.....
T Consensus 76 ~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~ 155 (291)
T cd07870 76 ETLTFVFEYMHTDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLISYLGELKLADFGLARAKSI 155 (291)
T ss_pred CeEEEEEecccCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEcCCCcEEEeccccccccCC
Confidence 78999999999998887776667789999999999999999999999999999999999999999999999998876543
Q ss_pred CCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCh-HHHHHHHHHHcCCCCCCcccCCCCC
Q 035861 170 PLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTE-VDQIDKIFKTLGTPTETIWPGLSEL 248 (332)
Q Consensus 170 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (332)
.........++..|+|||.+.+...++.++|+||||+++|++++|..||..... .+...++....+.+....++.+...
T Consensus 156 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (291)
T cd07870 156 PSQTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKL 235 (291)
T ss_pred CCCCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhc
Confidence 333334455788999999987655678899999999999999999999976543 3444555555555555555544443
Q ss_pred ccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCC
Q 035861 249 PGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWF 309 (332)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f 309 (332)
+.................... .-..+..+.+++.+|+..||.+|||+.|++.||||
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h~~~ 291 (291)
T cd07870 236 PNYKPEWFLPCKPQQLRVVWK-----RLSRPPKAEDLASQMLMMFPKDRISAQDALLHPYF 291 (291)
T ss_pred ccccchhccccCCcchhhhcc-----ccCCChHHHHHHHHHhCcCcccCcCHHHHhcCCCC
Confidence 332222111110000000000 00136788899999999999999999999999998
No 103
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=4e-46 Score=320.97 Aligned_cols=267 Identities=22% Similarity=0.374 Sum_probs=213.3
Q ss_pred cccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCCe
Q 035861 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHDS 91 (332)
Q Consensus 12 ~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 91 (332)
.|++.+.||+|+||+||++.+..+++.||+|++.......... ...+.+|+.+++.++|+||+++++.+.. ...
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~-----~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~ 74 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKG-----EAMALNEKQILEKVNSRFVVSLAYAYET-KDA 74 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhh-----HHHHHHHHHHHHhcCCCCEeeeeeeecC-CCe
Confidence 4889999999999999999999899999999997543222111 1235679999999999999999998844 478
Q ss_pred EEEEcccccccHH-HHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCC
Q 035861 92 VYMVMEYMEHDLK-WLMESM-KQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGS 169 (332)
Q Consensus 92 ~~lv~e~~~~~l~-~~~~~~-~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~ 169 (332)
.++||||++|+.+ +.+... ...+++..+..++.|++.||.|||+.|++|+||+|+||++++++.++|+|||.+.....
T Consensus 75 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~ 154 (285)
T cd05605 75 LCLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILLDDYGHIRISDLGLAVEIPE 154 (285)
T ss_pred EEEEEeccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEECCCCCEEEeeCCCceecCC
Confidence 9999999986544 444332 35699999999999999999999999999999999999999999999999999876532
Q ss_pred CCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCCc
Q 035861 170 PLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELP 249 (332)
Q Consensus 170 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (332)
. .......|+..|+|||++.+ ..++.++|+||+|+++|++++|..||...+.......+........
T Consensus 155 ~-~~~~~~~~~~~y~aPE~~~~-~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~----------- 221 (285)
T cd05605 155 G-ETIRGRVGTVGYMAPEVVKN-ERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKEDQ----------- 221 (285)
T ss_pred C-CccccccCCCCccCcHHhcC-CCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHHhhhcc-----------
Confidence 2 22234568899999999976 6788999999999999999999999987655443333322211000
Q ss_pred cccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCC-----CHHHHhcCCCCCCCCCCCCCC
Q 035861 250 GAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRI-----TVDDALNHYWFHEVPLPKSKD 319 (332)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp-----s~~ell~hp~f~~~~~~~~~~ 319 (332)
......++..+.+||.+||+.||++|| +++++++||||....+.....
T Consensus 222 ----------------------~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~~~~~~~~ 274 (285)
T cd05605 222 ----------------------EEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAHPFFRTANFKRLEA 274 (285)
T ss_pred ----------------------cccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcCcCccCCCHHHHhh
Confidence 011223788999999999999999999 999999999999988776654
No 104
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=6.8e-46 Score=324.53 Aligned_cols=284 Identities=38% Similarity=0.714 Sum_probs=208.0
Q ss_pred cccccccCcEEEEEEEEC--CCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEc-CCCeE
Q 035861 16 LNKISEGTYGIVYRARDK--KSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMD-DHDSV 92 (332)
Q Consensus 16 ~~~lg~g~~g~v~~~~~~--~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~ 92 (332)
..+||+|+||+||+|++. .+++.+|+|.+...... ..+.+|+.++++++||||+++++.+.. .....
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~~----------~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 75 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGIS----------MSACREIALLRELKHPNVISLQKVFLSHADRKV 75 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCCc----------HHHHHHHHHHHhcCCCCCcceeeeEecCCCcEE
Confidence 568999999999999965 46789999988643211 135689999999999999999998854 34568
Q ss_pred EEEcccccccHHHHHHhc--------CCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEE----cCCCcEEEee
Q 035861 93 YMVMEYMEHDLKWLMESM--------KQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLL----NNQGVLKICD 160 (332)
Q Consensus 93 ~lv~e~~~~~l~~~~~~~--------~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili----~~~~~~~l~d 160 (332)
++++|++++++.+.+... ...+++..++.++.||+.||+|||+.||+|+||||+||++ +.++.+||+|
T Consensus 76 ~lv~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~D 155 (317)
T cd07868 76 WLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIAD 155 (317)
T ss_pred EEEEeccCCCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEee
Confidence 999999999887765432 1358999999999999999999999999999999999999 4557899999
Q ss_pred cccccccCCCCC---CCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCh---------HHHHH
Q 035861 161 FGMSRQYGSPLK---PYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTE---------VDQID 228 (332)
Q Consensus 161 f~~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~---------~~~~~ 228 (332)
||++........ ......+++.|+|||++.+...++.++|+||+|+++|+|++|..||..... .....
T Consensus 156 fG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~ 235 (317)
T cd07868 156 MGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLD 235 (317)
T ss_pred cCceeccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCcccccccccccHHHHH
Confidence 999987643322 223457789999999998756789999999999999999999999965432 24455
Q ss_pred HHHHHcCCCCCCcccCCCCCccccccccCCchhhh-hhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCC
Q 035861 229 KIFKTLGTPTETIWPGLSELPGAKANFAKQPYNLL-RKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHY 307 (332)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp 307 (332)
.+....+.+....+..+...+.............. ...............+..+.+||.+||+.||.+|||++|+|+||
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~hp 315 (317)
T cd07868 236 RIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDP 315 (317)
T ss_pred HHHHhcCCCChHHhHHHhhccchhhhhhhhhccccCcccccchHHhcCCCCChHHHHHHHHHhccCcccCCCHHHHhcCC
Confidence 56666665555544443322211100000000000 00000000011122466789999999999999999999999999
Q ss_pred CC
Q 035861 308 WF 309 (332)
Q Consensus 308 ~f 309 (332)
||
T Consensus 316 ~f 317 (317)
T cd07868 316 YF 317 (317)
T ss_pred CC
Confidence 98
No 105
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=1.3e-46 Score=329.95 Aligned_cols=256 Identities=23% Similarity=0.405 Sum_probs=206.3
Q ss_pred ccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHH-HHhhCCCCCeeeeeeeEEcCCCeEEEE
Q 035861 17 NKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREIN-ILLSFDHPSIVNVKEVVMDDHDSVYMV 95 (332)
Q Consensus 17 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~-~l~~l~h~~i~~~~~~~~~~~~~~~lv 95 (332)
+.||+|+||+||++++..+++.+|+|++........... ..+..|.. +++.++||||+++++.+.. ....|+|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~-----~~~~~e~~~~l~~~~hp~iv~~~~~~~~-~~~~~lv 74 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQ-----KHIMAERNVLLKNVKHPFLVGLHYSFQT-TEKLYFV 74 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHH-----HHHHHHHHHHHHhCCCCCCccEEEEEec-CCEEEEE
Confidence 468999999999999999999999999976432211111 12344444 4677899999999998844 4789999
Q ss_pred cccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCCCCCCCc
Q 035861 96 MEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYT 175 (332)
Q Consensus 96 ~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~~~~~~~ 175 (332)
|||++|+.+.........+++..+..++.||+.||+|||++|++|+||||+||+++.++.++|+|||++...........
T Consensus 75 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~ 154 (325)
T cd05604 75 LDFVNGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSDTTT 154 (325)
T ss_pred EcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEeecCCcccCCCCCCCcc
Confidence 99999865555555577899999999999999999999999999999999999999999999999999875433333344
Q ss_pred cccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCCccccccc
Q 035861 176 SLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGAKANF 255 (332)
Q Consensus 176 ~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (332)
...|+..|+|||++.+ ..++.++|+||||+++|+|++|..||...+..+....+....
T Consensus 155 ~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~~~~~--------------------- 212 (325)
T cd05604 155 TFCGTPEYLAPEVIRK-QPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHKP--------------------- 212 (325)
T ss_pred cccCChhhCCHHHHcC-CCCCCcCccccccceehhhhcCCCCCCCCCHHHHHHHHHcCC---------------------
Confidence 5678999999999987 668899999999999999999999998877666655554321
Q ss_pred cCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCH----HHHhcCCCCCCCCCCC
Q 035861 256 AKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITV----DDALNHYWFHEVPLPK 316 (332)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~----~ell~hp~f~~~~~~~ 316 (332)
....+.++..+.++|.+||+.+|.+||++ .++++||||....+..
T Consensus 213 ----------------~~~~~~~~~~~~~ll~~ll~~~p~~R~~~~~~~~~i~~h~~f~~~~~~~ 261 (325)
T cd05604 213 ----------------LVLRPGASLTAWSILEELLEKDRQRRLGAKEDFLEIQEHPFFESLSWTD 261 (325)
T ss_pred ----------------ccCCCCCCHHHHHHHHHHhccCHHhcCCCCCCHHHHhcCCCcCCCCHHH
Confidence 01122368889999999999999999976 5999999999876544
No 106
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=4.7e-46 Score=326.45 Aligned_cols=270 Identities=24% Similarity=0.414 Sum_probs=210.5
Q ss_pred ccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhC-CCCCeeeeeeeEEcCCCeEEEE
Q 035861 17 NKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSF-DHPSIVNVKEVVMDDHDSVYMV 95 (332)
Q Consensus 17 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~lv 95 (332)
+.||+|+||+||+|+...+++.||+|++........... ..+..|+.++.++ .|++|+.+++.+ .+....|+|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~-----~~~~~e~~~~~~~~~~~~i~~~~~~~-~~~~~~~lv 74 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDI-----DWVQTEKHVFEQASSNPFLVGLHSCF-QTTSRLFLV 74 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHH-----HHHHHHHHHHHhhcCCCCEeeEEEEE-EeCCEEEEE
Confidence 469999999999999999999999999986533221111 1356788888887 699999999988 444789999
Q ss_pred cccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCCCCCCCc
Q 035861 96 MEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYT 175 (332)
Q Consensus 96 ~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~~~~~~~ 175 (332)
|||++|+.+.......+.+++..+..++.||+.||+|||++|++|+||||+||+++.++.++|+|||++...........
T Consensus 75 ~e~~~~~~L~~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~ 154 (327)
T cd05617 75 IEYVNGGDLMFHMQRQRKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGDTTS 154 (327)
T ss_pred EeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEeCCCCEEEeccccceeccCCCCcee
Confidence 99998765555555567899999999999999999999999999999999999999999999999999875433333334
Q ss_pred cccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCh------HHHHHHHHHHcCCCCCCcccCCCCCc
Q 035861 176 SLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTE------VDQIDKIFKTLGTPTETIWPGLSELP 249 (332)
Q Consensus 176 ~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (332)
...|++.|+|||.+.+ ..++.++|+||||+++|+|++|..||..... .+...+....
T Consensus 155 ~~~gt~~y~aPE~~~~-~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~---------------- 217 (327)
T cd05617 155 TFCGTPNYIAPEILRG-EEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILE---------------- 217 (327)
T ss_pred cccCCcccCCHHHHCC-CCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHh----------------
Confidence 5678999999999976 6789999999999999999999999964211 1111111111
Q ss_pred cccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCC------HHHHhcCCCCCCCCCCCC--CCCC
Q 035861 250 GAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRIT------VDDALNHYWFHEVPLPKS--KDFM 321 (332)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps------~~ell~hp~f~~~~~~~~--~~~~ 321 (332)
.....+..++..+.++|.+||+.||.+|++ ++++++||||..+.+... ....
T Consensus 218 --------------------~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h~~f~~~~~~~~~~~~~~ 277 (327)
T cd05617 218 --------------------KPIRIPRFLSVKASHVLKGFLNKDPKERLGCQPQTGFSDIKSHTFFRSIDWDLLEKKQVT 277 (327)
T ss_pred --------------------CCCCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHHcCCCCCCCCHHHHHhCCCC
Confidence 011112337888999999999999999997 579999999999886654 2344
Q ss_pred CCCCCccc
Q 035861 322 PTFPPQHA 329 (332)
Q Consensus 322 ~~~~~~~~ 329 (332)
++++|..+
T Consensus 278 ~~~~~~~~ 285 (327)
T cd05617 278 PPFKPQIT 285 (327)
T ss_pred CCccCCCC
Confidence 45556543
No 107
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=3.7e-47 Score=318.27 Aligned_cols=255 Identities=31% Similarity=0.529 Sum_probs=222.8
Q ss_pred hhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCC
Q 035861 10 VFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDH 89 (332)
Q Consensus 10 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 89 (332)
-++|++.+.||.|.+|.|-++.....|+.||||.+++.....+.... .|.+|+++|..|+||||+.++++| ++.
T Consensus 52 kHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlv-----hIRREIeIMSsLNHPhII~IyEVF-ENk 125 (668)
T KOG0611|consen 52 KHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLV-----HIRREIEIMSSLNHPHIIQIYEVF-ENK 125 (668)
T ss_pred hhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHH-----HHHHHHHHHhhcCCCceeehhhhh-cCC
Confidence 35899999999999999999999999999999999887765544433 578999999999999999999999 776
Q ss_pred CeEEEEcccccc-cHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccC
Q 035861 90 DSVYMVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYG 168 (332)
Q Consensus 90 ~~~~lv~e~~~~-~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~ 168 (332)
....|||||..| .|.+.+.. .+.+++.++..+++||..|+.|+|+++++|+|||.+|||+|.++++||.|||++..+.
T Consensus 126 dKIvivMEYaS~GeLYDYiSe-r~~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILLD~N~NiKIADFGLSNly~ 204 (668)
T KOG0611|consen 126 DKIVIVMEYASGGELYDYISE-RGSLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILLDQNNNIKIADFGLSNLYA 204 (668)
T ss_pred ceEEEEEEecCCccHHHHHHH-hccccHHHHHHHHHHHHHHHHHHhhccceecccchhheeecCCCCeeeeccchhhhhc
Confidence 889999999986 56665555 7889999999999999999999999999999999999999999999999999998764
Q ss_pred CCCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCC
Q 035861 169 SPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSEL 248 (332)
Q Consensus 169 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (332)
. ..-..+.||++.|.+||.+.+..+-.+..|.||||+++|.+..|..||++.+......+|.++....++
T Consensus 205 ~-~kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~lvrQIs~GaYrEP~--------- 274 (668)
T KOG0611|consen 205 D-KKFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRLVRQISRGAYREPE--------- 274 (668)
T ss_pred c-ccHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHHHHHHHhhcccccCCC---------
Confidence 3 344568899999999999998666788999999999999999999999999888887777665322222
Q ss_pred ccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCC
Q 035861 249 PGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFH 310 (332)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~ 310 (332)
.+..+.-||++||.++|++|.++++|..|=|.+
T Consensus 275 -----------------------------~PSdA~gLIRwmLmVNP~RRATieDiAsHWWvN 307 (668)
T KOG0611|consen 275 -----------------------------TPSDASGLIRWMLMVNPERRATIEDIASHWWVN 307 (668)
T ss_pred -----------------------------CCchHHHHHHHHHhcCcccchhHHHHhhhheee
Confidence 467778999999999999999999999996543
No 108
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=1.2e-46 Score=329.34 Aligned_cols=255 Identities=26% Similarity=0.433 Sum_probs=207.5
Q ss_pred cccccccCcEEEEEEEE---CCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCCeE
Q 035861 16 LNKISEGTYGIVYRARD---KKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHDSV 92 (332)
Q Consensus 16 ~~~lg~g~~g~v~~~~~---~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 92 (332)
++.||+|+||+||++++ ..+++.+|+|++......... ...+..|++++++++||||+++++.+.. ....
T Consensus 1 l~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~------~~~~~~E~~~l~~l~h~niv~~~~~~~~-~~~~ 73 (318)
T cd05582 1 LKVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRD------RVRTKMERDILAEVNHPFIVKLHYAFQT-EGKL 73 (318)
T ss_pred CceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhh------HHHHHHHHHHHHhCCCCCcccEEEEEEc-CCEE
Confidence 36799999999999986 357899999999764322111 1134579999999999999999999854 4789
Q ss_pred EEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCCCCC
Q 035861 93 YMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLK 172 (332)
Q Consensus 93 ~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~~~~ 172 (332)
|+||||++|+.+.........+++..++.++.||+.||+|||+.|++|+||||+||+++.++.++|+|||.+........
T Consensus 74 ~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~ 153 (318)
T cd05582 74 YLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEK 153 (318)
T ss_pred EEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEECCCCcEEEeeccCCcccCCCCC
Confidence 99999998654444444467799999999999999999999999999999999999999999999999999876543323
Q ss_pred CCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCCcccc
Q 035861 173 PYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGAK 252 (332)
Q Consensus 173 ~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (332)
......|+..|+|||.+.. ..++.++|+||||+++|+|++|..||...+.......+.....
T Consensus 154 ~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i~~~~~----------------- 215 (318)
T cd05582 154 KAYSFCGTVEYMAPEVVNR-RGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILKAKL----------------- 215 (318)
T ss_pred ceecccCChhhcCHHHHcC-CCCCCccceeccceEeeeeccCCCCCCCCCHHHHHHHHHcCCC-----------------
Confidence 3344578999999999876 6678999999999999999999999988776666555543211
Q ss_pred ccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCC-----HHHHhcCCCCCCCCCC
Q 035861 253 ANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRIT-----VDDALNHYWFHEVPLP 315 (332)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps-----~~ell~hp~f~~~~~~ 315 (332)
..+..+++.+.+||++||+.||++||+ ++++++||||..+.+.
T Consensus 216 --------------------~~p~~~~~~~~~li~~~l~~~P~~R~~a~~~~~~~~~~~~~~~~~~~~ 263 (318)
T cd05582 216 --------------------GMPQFLSPEAQSLLRALFKRNPANRLGAGPDGVEEIKRHPFFSTIDWN 263 (318)
T ss_pred --------------------CCCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhCCCCcCCCCHH
Confidence 111237889999999999999999999 7889999999987644
No 109
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=6.9e-46 Score=328.89 Aligned_cols=262 Identities=26% Similarity=0.377 Sum_probs=206.8
Q ss_pred chhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcC
Q 035861 9 SVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDD 88 (332)
Q Consensus 9 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 88 (332)
.+.+|+.++.||.|+||+||++++..+++.||||++....... ....+.+|+.+++.++|+||+++++++ ..
T Consensus 72 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-------~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~ 143 (353)
T PLN00034 72 SLSELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDT-------VRRQICREIEILRDVNHPNVVKCHDMF-DH 143 (353)
T ss_pred CHHHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHH-------HHHHHHHHHHHHHhCCCCCcceeeeEe-cc
Confidence 4678999999999999999999999999999999986432111 112467899999999999999999998 45
Q ss_pred CCeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccC
Q 035861 89 HDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYG 168 (332)
Q Consensus 89 ~~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~ 168 (332)
....++||||+.++.+.. ....++..+..++.||+.||+|||++|++|+||||+||+++.++.++|+|||.+....
T Consensus 144 ~~~~~lv~e~~~~~~L~~----~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~ 219 (353)
T PLN00034 144 NGEIQVLLEFMDGGSLEG----THIADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLINSAKNVKIADFGVSRILA 219 (353)
T ss_pred CCeEEEEEecCCCCcccc----cccCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEcccccceecc
Confidence 578999999999865432 2346788889999999999999999999999999999999999999999999988664
Q ss_pred CCCCCCccccccccccchhhhcC----CCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccC
Q 035861 169 SPLKPYTSLVVTLWYRAPELLLG----AKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPG 244 (332)
Q Consensus 169 ~~~~~~~~~~~~~~y~aPE~~~~----~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (332)
..........|+..|+|||.+.. ....+.++||||||+++|+|++|..||......+....+.....
T Consensus 220 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~--------- 290 (353)
T PLN00034 220 QTMDPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAICM--------- 290 (353)
T ss_pred cccccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHhc---------
Confidence 43333445678999999998743 23456789999999999999999999974332221111111100
Q ss_pred CCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCCCC
Q 035861 245 LSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVPLP 315 (332)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~ 315 (332)
.........++.++++||.+||+.||++||++.|+|+||||.+-...
T Consensus 291 ------------------------~~~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~hp~~~~~~~~ 337 (353)
T PLN00034 291 ------------------------SQPPEAPATASREFRHFISCCLQREPAKRWSAMQLLQHPFILRAQPG 337 (353)
T ss_pred ------------------------cCCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcCcccccCCcc
Confidence 00011123378899999999999999999999999999999996433
No 110
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=2.7e-46 Score=327.45 Aligned_cols=256 Identities=24% Similarity=0.395 Sum_probs=204.9
Q ss_pred ccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHH-HHHhhCCCCCeeeeeeeEEcCCCeEEEE
Q 035861 17 NKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREI-NILLSFDHPSIVNVKEVVMDDHDSVYMV 95 (332)
Q Consensus 17 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~-~~l~~l~h~~i~~~~~~~~~~~~~~~lv 95 (332)
+.||+|+||+||+|++..+++.||+|++........... ..+..|. .+++.++||||+++++.+ .+....|+|
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~-----~~~~~e~~~~l~~~~h~~iv~~~~~~-~~~~~~~lv 74 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQ-----NHIMAERNVLLKNLKHPFLVGLHYSF-QTAEKLYFV 74 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHH-----HHHHHHHHHHHHhCCCCCccceeeEE-EcCCEEEEE
Confidence 469999999999999999999999999975432111111 1233444 457788999999999888 444789999
Q ss_pred cccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCCCCCCCc
Q 035861 96 MEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYT 175 (332)
Q Consensus 96 ~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~~~~~~~ 175 (332)
|||++|+.+.........+++..+..++.||+.||+|||++|++|+||||+||+++.++.++|+|||++...........
T Consensus 75 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~ 154 (321)
T cd05603 75 LDYVNGGELFFHLQRERCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEETTS 154 (321)
T ss_pred EcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEccCCCCccCCCCCCccc
Confidence 99999765554445567899999999999999999999999999999999999999999999999999875433223334
Q ss_pred cccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCCccccccc
Q 035861 176 SLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGAKANF 255 (332)
Q Consensus 176 ~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (332)
...|++.|+|||.+.+ ..++.++|+||||+++|+|++|..||...+.......+....
T Consensus 155 ~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~--------------------- 212 (321)
T cd05603 155 TFCGTPEYLAPEVLRK-EPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILHKP--------------------- 212 (321)
T ss_pred cccCCcccCCHHHhcC-CCCCCcCcccccchhhhhhhcCCCCCCCCCHHHHHHHHhcCC---------------------
Confidence 5578999999999876 668899999999999999999999998877665555543221
Q ss_pred cCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCH----HHHhcCCCCCCCCCCC
Q 035861 256 AKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITV----DDALNHYWFHEVPLPK 316 (332)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~----~ell~hp~f~~~~~~~ 316 (332)
...++..+..+.++|.+||+.||.+|+++ .++++|+||..+.+..
T Consensus 213 ----------------~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~~~~~~~~~~~ 261 (321)
T cd05603 213 ----------------LQLPGGKTVAACDLLVGLLHKDQRRRLGAKADFLEIKNHVFFSPINWDD 261 (321)
T ss_pred ----------------CCCCCCCCHHHHHHHHHHccCCHhhcCCCCCCHHHHhCCCCcCCCCHHH
Confidence 11122367889999999999999999975 5999999999877644
No 111
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=7.9e-46 Score=325.59 Aligned_cols=279 Identities=24% Similarity=0.355 Sum_probs=216.3
Q ss_pred hcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCC
Q 035861 11 FEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHD 90 (332)
Q Consensus 11 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 90 (332)
++|++++.||+|+||+||++++..+++.||+|++......... ....+.+|..++..++|+||+.+++.+. +..
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~-----~~~~~~~e~~~l~~~~~~~i~~~~~~~~-~~~ 74 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRA-----ETACFREERDVLVNGDRRWITNLHYAFQ-DEN 74 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhh-----hHHHHHHHHHHHHhCCCCCCCceEEEEe-cCC
Confidence 4799999999999999999999999999999999753221111 1123567889999999999999999984 448
Q ss_pred eEEEEcccccc-cHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCC
Q 035861 91 SVYMVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGS 169 (332)
Q Consensus 91 ~~~lv~e~~~~-~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~ 169 (332)
..|+||||++| ++.+.+......+++..+..++.||+.||+|||++|++|+||||+||+++.++.++|+|||.+.....
T Consensus 75 ~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 154 (331)
T cd05597 75 NLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLA 154 (331)
T ss_pred eEEEEEecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEECCCCCEEEEECCceeecCC
Confidence 89999999976 45555554466799999999999999999999999999999999999999999999999999876533
Q ss_pred CCC-CCccccccccccchhhhcC----CCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccC
Q 035861 170 PLK-PYTSLVVTLWYRAPELLLG----AKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPG 244 (332)
Q Consensus 170 ~~~-~~~~~~~~~~y~aPE~~~~----~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (332)
... ......|++.|+|||++.. ...++.++|+||||+++|+|++|..||...+..+....+........
T Consensus 155 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~------ 228 (331)
T cd05597 155 DGTVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKEHFQ------ 228 (331)
T ss_pred CCCccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHHHHHcCCCccc------
Confidence 222 1223468999999999863 24578899999999999999999999988776666555543211000
Q ss_pred CCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCC--CCCHHHHhcCCCCCCCCCCCCCCCCC
Q 035861 245 LSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEK--RITVDDALNHYWFHEVPLPKSKDFMP 322 (332)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~--Rps~~ell~hp~f~~~~~~~~~~~~~ 322 (332)
.....+.++..+++||++||..++.+ |++++++++||||....+.......+
T Consensus 229 --------------------------~~~~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~hp~~~~~~~~~~~~~~~ 282 (331)
T cd05597 229 --------------------------FPPDVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDHPFFEGIDWDNIRNSTA 282 (331)
T ss_pred --------------------------CCCccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCCCCCCCCHHHHhhCCC
Confidence 00011237889999999998764444 78999999999999987655554444
Q ss_pred CCCCc
Q 035861 323 TFPPQ 327 (332)
Q Consensus 323 ~~~~~ 327 (332)
.+.|.
T Consensus 283 ~~~~~ 287 (331)
T cd05597 283 PYVPE 287 (331)
T ss_pred CccCc
Confidence 44443
No 112
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=4.1e-47 Score=307.82 Aligned_cols=296 Identities=44% Similarity=0.834 Sum_probs=242.7
Q ss_pred chhcccccccccccCcEEEEEEEECCCCc----EEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeee
Q 035861 9 SVFEFEKLNKISEGTYGIVYRARDKKSGE----IVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEV 84 (332)
Q Consensus 9 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~----~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~ 84 (332)
.+..|+.++.||+|.+|.||+|..+.++. .+|||.+..... ...++.+.-+|+.+++.+.|+|++.+..+
T Consensus 22 ~l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd------~tGiS~SAcREiaL~REl~h~nvi~Lv~V 95 (438)
T KOG0666|consen 22 DLFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKD------GTGISMSACREIALLRELKHPNVISLVKV 95 (438)
T ss_pred HHHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCC------CCCcCHHHHHHHHHHHHhcCCcchhHHHH
Confidence 45689999999999999999997654433 689998865432 22344466799999999999999999999
Q ss_pred EEcCCCeEEEEcccccccHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCC----CcE
Q 035861 85 VMDDHDSVYMVMEYMEHDLKWLMESM----KQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQ----GVL 156 (332)
Q Consensus 85 ~~~~~~~~~lv~e~~~~~l~~~~~~~----~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~----~~~ 156 (332)
+.+.+...++++||++.++...+.-. ...++...++.+++||+.|++|||++-++||||||.||+|..+ |.|
T Consensus 96 fl~~d~~v~l~fdYAEhDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~V 175 (438)
T KOG0666|consen 96 FLSHDKKVWLLFDYAEHDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGRV 175 (438)
T ss_pred HhccCceEEEEehhhhhhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCccCee
Confidence 98877999999999999998877542 2468999999999999999999999999999999999999988 899
Q ss_pred EEeecccccccCCCCCCC---ccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCC---------ChH
Q 035861 157 KICDFGMSRQYGSPLKPY---TSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGT---------TEV 224 (332)
Q Consensus 157 ~l~df~~~~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~---------~~~ 224 (332)
||+|+|+++.+..+..+. .....|.+|+|||.+.+...|+.+.|+|+.||++.||+|..+.|... -..
T Consensus 176 KIaDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~ 255 (438)
T KOG0666|consen 176 KIADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQH 255 (438)
T ss_pred EeecccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchH
Confidence 999999999886654433 45567999999999999999999999999999999999999998642 345
Q ss_pred HHHHHHHHHcCCCCCCcccCCCCCccccccccCCchh---h--hhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCC
Q 035861 225 DQIDKIFKTLGTPTETIWPGLSELPGAKANFAKQPYN---L--LRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRIT 299 (332)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~--~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps 299 (332)
+...+|+..++.|.+..||++.+.+............ . +.... .....-++...+|+.+||..||.+|.+
T Consensus 256 dQl~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~-----~~~k~k~~~a~~LL~klL~yDP~kRIt 330 (438)
T KOG0666|consen 256 DQLDRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYY-----HKHKVKDPSALDLLQKLLTYDPIKRIT 330 (438)
T ss_pred HHHHHHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHH-----HHhcCCCchHHHHHHHHhccCchhhcc
Confidence 7789999999999999999999888753332222111 0 11111 111223566889999999999999999
Q ss_pred HHHHhcCCCCCCCCCC
Q 035861 300 VDDALNHYWFHEVPLP 315 (332)
Q Consensus 300 ~~ell~hp~f~~~~~~ 315 (332)
++++|+|+||..-+.|
T Consensus 331 a~qAleh~yF~~d~lp 346 (438)
T KOG0666|consen 331 AEQALEHPYFTEDPLP 346 (438)
T ss_pred HHHHhcccccccCCCC
Confidence 9999999999998665
No 113
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=100.00 E-value=3.1e-45 Score=319.45 Aligned_cols=290 Identities=48% Similarity=0.926 Sum_probs=229.1
Q ss_pred ccccchhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeee
Q 035861 5 QGCRSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEV 84 (332)
Q Consensus 5 ~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~ 84 (332)
.|+...++|++.+.||.|++|.||+|.+..+++.+++|.+......... .....+|++.++.++|+||+++++.
T Consensus 2 ~~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~------~~~~~~e~~~l~~l~h~~i~~~~~~ 75 (311)
T cd07866 2 YGCSKLRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGF------PITALREIKILKKLKHPNVVPLIDM 75 (311)
T ss_pred CCCcccccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCc------chhHHHHHHHHHhcCCCCccchhhh
Confidence 5788899999999999999999999999999999999998754322211 1134689999999999999999998
Q ss_pred EEcCC-------CeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEE
Q 035861 85 VMDDH-------DSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLK 157 (332)
Q Consensus 85 ~~~~~-------~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~ 157 (332)
+.+.. ...++|+||+++++...+......+++..+..++.|++.||+|||+.|++|+||+|+||+++.++.++
T Consensus 76 ~~~~~~~~~~~~~~~~lv~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~~~~~~~~ 155 (311)
T cd07866 76 AVERPDKSKRKRGSVYMVTPYMDHDLSGLLENPSVKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILIDNQGILK 155 (311)
T ss_pred eecccccccccCceEEEEEecCCcCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEE
Confidence 75433 34799999999988887776667899999999999999999999999999999999999999999999
Q ss_pred EeecccccccCCCCC-----------CCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 035861 158 ICDFGMSRQYGSPLK-----------PYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQ 226 (332)
Q Consensus 158 l~df~~~~~~~~~~~-----------~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~ 226 (332)
|+|||.+........ ......++..|+|||.+.+...++.++|+||||+++|+|++|..||...+....
T Consensus 156 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~ 235 (311)
T cd07866 156 IADFGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQ 235 (311)
T ss_pred ECcCccchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 999999876532211 112234577899999987656689999999999999999999999998888888
Q ss_pred HHHHHHHcCCCCCCcccCCCCCccccc--cccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHh
Q 035861 227 IDKIFKTLGTPTETIWPGLSELPGAKA--NFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDAL 304 (332)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell 304 (332)
...+......+....++.+...+.... ........ ... ....+++.+.+||.+||+.||.+||++.+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--------~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell 306 (311)
T cd07866 236 LHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRT-LEE--------RFGKLGPEGLDLLSKLLSLDPYKRLTASDAL 306 (311)
T ss_pred HHHHHHHhCCCChhhchhhhhcccccccccCCCCCcc-HHH--------HcccCChhHHHHHHHHcccCcccCcCHHHHh
Confidence 887777766665555544433332211 00000000 010 1123567889999999999999999999999
Q ss_pred cCCCC
Q 035861 305 NHYWF 309 (332)
Q Consensus 305 ~hp~f 309 (332)
.||||
T Consensus 307 ~~~~f 311 (311)
T cd07866 307 EHPYF 311 (311)
T ss_pred cCCCC
Confidence 99998
No 114
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=3.4e-46 Score=327.24 Aligned_cols=257 Identities=25% Similarity=0.391 Sum_probs=206.7
Q ss_pred ccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHH-HHHhhCCCCCeeeeeeeEEcCCCeEEEE
Q 035861 17 NKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREI-NILLSFDHPSIVNVKEVVMDDHDSVYMV 95 (332)
Q Consensus 17 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~-~~l~~l~h~~i~~~~~~~~~~~~~~~lv 95 (332)
+.||+|+||+||++++..+++.||+|++........... ..+..|. .+++.++|+||+.+++.+.. ....|+|
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~-----~~~~~e~~~~l~~~~h~~Iv~~~~~~~~-~~~~~lv 74 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEE-----KHIMSERNVLLKNVKHPFLVGLHFSFQT-ADKLYFV 74 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHH-----HHHHHHHHHHHHhCCCCCCCceeEEEEc-CCeEEEE
Confidence 469999999999999999999999999975432111110 1233343 34677899999999998844 4789999
Q ss_pred cccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCCCCCCCc
Q 035861 96 MEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYT 175 (332)
Q Consensus 96 ~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~~~~~~~ 175 (332)
|||++|+.+.........+++..+..++.||+.||+|||++||+|+||||+||+++.++.++|+|||++...........
T Consensus 75 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~~~~ 154 (325)
T cd05602 75 LDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNGTTS 154 (325)
T ss_pred EeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEEccCCCCcccccCCCCcc
Confidence 99999866555555577899999999999999999999999999999999999999999999999999875433333344
Q ss_pred cccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCCccccccc
Q 035861 176 SLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGAKANF 255 (332)
Q Consensus 176 ~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (332)
...|++.|+|||++.+ ..++.++|+||||+++|+|++|..||...+..+....+.....
T Consensus 155 ~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~-------------------- 213 (325)
T cd05602 155 TFCGTPEYLAPEVLHK-QPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPL-------------------- 213 (325)
T ss_pred cccCCccccCHHHHcC-CCCCCccccccccHHHHHHhcCCCCCCCCCHHHHHHHHHhCCc--------------------
Confidence 5678999999999987 6789999999999999999999999998877666655543210
Q ss_pred cCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHH----HHhcCCCCCCCCCCCC
Q 035861 256 AKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVD----DALNHYWFHEVPLPKS 317 (332)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~----ell~hp~f~~~~~~~~ 317 (332)
...+.++..+.++|.+||+.||.+|+++. ++++|+||..+.|.+.
T Consensus 214 -----------------~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~i~~~~~~~~~~~~~~ 262 (325)
T cd05602 214 -----------------QLKPNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKNHIFFSPINWDDL 262 (325)
T ss_pred -----------------CCCCCCCHHHHHHHHHHcccCHHHCCCCCCCHHHHhcCcccCCCCHHHH
Confidence 11234788999999999999999999866 8999999988765443
No 115
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=2.6e-45 Score=315.75 Aligned_cols=282 Identities=48% Similarity=0.925 Sum_probs=224.1
Q ss_pred ccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCCeE
Q 035861 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHDSV 92 (332)
Q Consensus 13 y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 92 (332)
|++.+.||.|++|+||+|.++.+|..||+|++........ ....+.+|+..++.++|+|++++++.+.+ ....
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~------~~~~~~~E~~~l~~l~~~~iv~~~~~~~~-~~~~ 73 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEG------VPSTAIREISLLKELNHPNIVRLLDVVHS-ENKL 73 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeeccccccc------chhHHHHHHHHHHhcCCCCccCHhheecc-CCeE
Confidence 6889999999999999999999999999999875432211 11245689999999999999999999854 4889
Q ss_pred EEEcccccccHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCCCC
Q 035861 93 YMVMEYMEHDLKWLMESMK-QPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPL 171 (332)
Q Consensus 93 ~lv~e~~~~~l~~~~~~~~-~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~~~ 171 (332)
++++||+++++.+.+.... ..+++..+..++.|++.||++||+.|++|+||+|+||+++.++.++|+|||.+.......
T Consensus 74 ~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~ 153 (283)
T cd07835 74 YLVFEFLDLDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLIDREGALKLADFGLARAFGVPV 153 (283)
T ss_pred EEEEeccCcCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCcEEEeecccccccCCCc
Confidence 9999999888777665533 368999999999999999999999999999999999999999999999999987654433
Q ss_pred CCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCCccc
Q 035861 172 KPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGA 251 (332)
Q Consensus 172 ~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (332)
.......++..|+|||.+.+...++.++|+||||+++|+|++|..||...+......++.+....+....++.+...+..
T Consensus 154 ~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (283)
T cd07835 154 RTYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDY 233 (283)
T ss_pred cccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhh
Confidence 33344456788999998876556789999999999999999999999988887777777776666655554444333322
Q ss_pred cccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCC
Q 035861 252 KANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWF 309 (332)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f 309 (332)
.......... ......+.++..+.++|.+||+.||++||+++|+++||||
T Consensus 234 ~~~~~~~~~~--------~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~ 283 (283)
T cd07835 234 KPTFPKWARQ--------DLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQHPYF 283 (283)
T ss_pred hhhccccccc--------chhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcCCCC
Confidence 2111111111 1112234478899999999999999999999999999998
No 116
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=3.6e-45 Score=315.26 Aligned_cols=284 Identities=44% Similarity=0.790 Sum_probs=226.0
Q ss_pred cccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCCe
Q 035861 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHDS 91 (332)
Q Consensus 12 ~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 91 (332)
+|++.+.||.|++|.||+|.+..++..+++|++........ ....+.+|+..+++++|+|++++++.+.. ...
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~------~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~ 73 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGG------IPNQALREIKALQACQHPYVVKLLDVFPH-GSG 73 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccch------hhHHHHHHHHHHHhCCCCCCcceeeEEec-CCe
Confidence 58999999999999999999998999999999876543221 11256789999999999999999999855 478
Q ss_pred EEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCCCC
Q 035861 92 VYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPL 171 (332)
Q Consensus 92 ~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~~~ 171 (332)
.++|+|++++++.+.+......+++..++.++.||+.||+|||+.|++|+||+|+||+++.++.++|+|||.+.......
T Consensus 74 ~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~ 153 (286)
T cd07832 74 FVLVMEYMPSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLISADGVLKIADFGLARLFSEEE 153 (286)
T ss_pred eEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEEcCCCcEEEeeeeecccccCCC
Confidence 99999999667777776666789999999999999999999999999999999999999999999999999987664332
Q ss_pred -CCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCCcc
Q 035861 172 -KPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPG 250 (332)
Q Consensus 172 -~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (332)
.......++..|+|||.+.+...++.++|+||||+++|++++|..||...........+......+....++.+..+..
T Consensus 154 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (286)
T cd07832 154 PRLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPD 233 (286)
T ss_pred CCccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcch
Confidence 1233456888999999987756679999999999999999999999988888777777777766665555554433222
Q ss_pred ccc-cccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCC
Q 035861 251 AKA-NFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFH 310 (332)
Q Consensus 251 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~ 310 (332)
... ........... ...+.++..+.+||.+||+.+|++||+++++|+||||.
T Consensus 234 ~~~~~~~~~~~~~~~--------~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h~~~~ 286 (286)
T cd07832 234 YNKITFPESKPIPLE--------EIFPDASPEALDLLKGLLVYDPSKRLSAAEALRHPYFT 286 (286)
T ss_pred hhcccCCCCCcchHH--------HhCCCccHHHHHHHHHHhccChhhCCCHHHHhhCcCcC
Confidence 100 00000000000 11234678999999999999999999999999999994
No 117
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=7.1e-45 Score=313.46 Aligned_cols=286 Identities=35% Similarity=0.616 Sum_probs=217.6
Q ss_pred hcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCC
Q 035861 11 FEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHD 90 (332)
Q Consensus 11 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 90 (332)
++|++.+.||+|++|.||+|.+..+++.||+|++........ ....+.+|+.++++++|+|++++++.+.. ..
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~------~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~ 73 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPV------IKKIALREIRMLKQLKHPNLVNLIEVFRR-KR 73 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCcc------ccHHHHHHHHHHHhCCCCCEeeeeeEEee-CC
Confidence 479999999999999999999998999999999865432111 11235689999999999999999999854 47
Q ss_pred eEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCCC
Q 035861 91 SVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSP 170 (332)
Q Consensus 91 ~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~~ 170 (332)
..++|+||+++++++.+......+++..++.++.||+.||+|||+.|++|+||+|+||+++.++.++|+|||.+......
T Consensus 74 ~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~ 153 (286)
T cd07847 74 KLHLVFEYCDHTVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILITKQGQIKLCDFGFARILTGP 153 (286)
T ss_pred EEEEEEeccCccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEEcCCCcEEECccccceecCCC
Confidence 88999999999988888776778999999999999999999999999999999999999999999999999999876544
Q ss_pred CCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCCcc
Q 035861 171 LKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPG 250 (332)
Q Consensus 171 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (332)
........++..|+|||.+.+...++.++|+||||+++|+|++|..||.+.+..+....+..............+..-.
T Consensus 154 ~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 232 (286)
T cd07847 154 GDDYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQ- 232 (286)
T ss_pred cccccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhccccc-
Confidence 3333445678889999998765668899999999999999999999998877666555554433222111000000000
Q ss_pred ccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCC
Q 035861 251 AKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWF 309 (332)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f 309 (332)
..... ..+. .. .........+.++..+.+||.+||+.+|++||++.|++.||||
T Consensus 233 ~~~~~-~~~~--~~--~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~~~f 286 (286)
T cd07847 233 FFKGL-SIPE--PE--TREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEHPYF 286 (286)
T ss_pred ccccc-cCCC--cc--cccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcCCCC
Confidence 00000 0000 00 0000000113368899999999999999999999999999998
No 118
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=5.2e-46 Score=322.66 Aligned_cols=246 Identities=24% Similarity=0.406 Sum_probs=209.8
Q ss_pred hcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCC
Q 035861 11 FEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHD 90 (332)
Q Consensus 11 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 90 (332)
..+..++.||+|-||.||.|.++. ...||+|.+.......+ ++.+|+.+|++|+|++|+++++++..+ .
T Consensus 206 ~~l~l~~~LG~G~FG~V~~g~~~~-~~~vavk~ik~~~m~~~---------~f~~Ea~iMk~L~H~~lV~l~gV~~~~-~ 274 (468)
T KOG0197|consen 206 EELKLIRELGSGQFGEVWLGKWNG-STKVAVKTIKEGSMSPE---------AFLREAQIMKKLRHEKLVKLYGVCTKQ-E 274 (468)
T ss_pred HHHHHHHHhcCCccceEEEEEEcC-CCcccceEEeccccChh---------HHHHHHHHHHhCcccCeEEEEEEEecC-C
Confidence 367889999999999999999984 33699999987543322 567999999999999999999999544 5
Q ss_pred eEEEEccccc-ccHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccC
Q 035861 91 SVYMVMEYME-HDLKWLMES-MKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYG 168 (332)
Q Consensus 91 ~~~lv~e~~~-~~l~~~~~~-~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~ 168 (332)
.+||||||++ |+|++.+.. ....+.....+.++.|||+|++||+++++|||||-..||||+.+..+||+|||+++...
T Consensus 275 piyIVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~ 354 (468)
T KOG0197|consen 275 PIYIVTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVDEDLVVKISDFGLARLIG 354 (468)
T ss_pred ceEEEEEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeeccCceEEEcccccccccC
Confidence 7999999998 677777776 45679999999999999999999999999999999999999999999999999999543
Q ss_pred CC-CCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCCCCCCcccCCC
Q 035861 169 SP-LKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA-KKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLS 246 (332)
Q Consensus 169 ~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (332)
+. ........-++-|.|||++.. ..++.+|||||||++|||++| |+.||...+..+....+.++
T Consensus 355 d~~Y~~~~~~kfPIkWtAPEa~~~-~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~~le~G------------- 420 (468)
T KOG0197|consen 355 DDEYTASEGGKFPIKWTAPEALNY-GKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEVLELLERG------------- 420 (468)
T ss_pred CCceeecCCCCCCceecCHHHHhh-CCcccccceeehhhhHHHHhccCCCCCCCCCHHHHHHHHhcc-------------
Confidence 22 222333445677999999988 679999999999999999999 99999999998888887664
Q ss_pred CCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHh
Q 035861 247 ELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDAL 304 (332)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell 304 (332)
.+.+.+..+++++.+++..||+.+|++|||++.+.
T Consensus 421 -----------------------yRlp~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~ 455 (468)
T KOG0197|consen 421 -----------------------YRLPRPEGCPDEVYELMKSCWHEDPEDRPTFETLR 455 (468)
T ss_pred -----------------------CcCCCCCCCCHHHHHHHHHHhhCCcccCCCHHHHH
Confidence 34445556899999999999999999999998664
No 119
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=2.7e-45 Score=314.51 Aligned_cols=261 Identities=25% Similarity=0.359 Sum_probs=203.6
Q ss_pred ccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCCeEEEEccc
Q 035861 19 ISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHDSVYMVMEY 98 (332)
Q Consensus 19 lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~lv~e~ 98 (332)
||+|+||+||++....+++.||+|.+.......... ...+..|++++++++||||+++.+.+. +....++||||
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~-----~~~~~~E~~il~~l~hp~i~~~~~~~~-~~~~~~lv~e~ 74 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSG-----EKMALLEKEILEKVNSPFIVNLAYAFE-SKTHLCLVMSL 74 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchh-----hHHHHHHHHHHHhcCCCcEEEEEEEEe-cCCeEEEEEec
Confidence 799999999999999999999999997543221111 113456999999999999999999884 45789999999
Q ss_pred ccccHH-HHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCCCCCCCcc
Q 035861 99 MEHDLK-WLMESM-KQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTS 176 (332)
Q Consensus 99 ~~~~l~-~~~~~~-~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~~~~~~~~ 176 (332)
++|+.+ +.+... ...+++..+..++.|++.||+|||+.|++|+||+|+||+++.++.++|+|||.+...... .....
T Consensus 75 ~~g~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~-~~~~~ 153 (277)
T cd05607 75 MNGGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDG-KTITQ 153 (277)
T ss_pred CCCCCHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEcCCCCEEEeeceeeeecCCC-ceeec
Confidence 987544 444332 345899999999999999999999999999999999999999999999999998765432 22234
Q ss_pred ccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCCcccccccc
Q 035861 177 LVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGAKANFA 256 (332)
Q Consensus 177 ~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (332)
..++..|+|||++.+ ..++.++|+||||+++|+|++|..||...........+.....
T Consensus 154 ~~~~~~y~aPE~~~~-~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~--------------------- 211 (277)
T cd05607 154 RAGTNGYMAPEILKE-EPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTL--------------------- 211 (277)
T ss_pred cCCCCCccCHHHHcc-CCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhh---------------------
Confidence 568889999999987 5589999999999999999999999976543222222211100
Q ss_pred CCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCH----HHHhcCCCCCCCCCCCCCC
Q 035861 257 KQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITV----DDALNHYWFHEVPLPKSKD 319 (332)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~----~ell~hp~f~~~~~~~~~~ 319 (332)
..........++.++++||.+||+.||++||++ +++++||||+.++++....
T Consensus 212 -----------~~~~~~~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~~~h~~f~~~~~~~~~~ 267 (277)
T cd05607 212 -----------EDEVKFEHQNFTEESKDICRLFLAKKPEDRLGSREKNDDPRKHEFFKTINFPRLEA 267 (277)
T ss_pred -----------ccccccccccCCHHHHHHHHHHhccCHhhCCCCccchhhhhcChhhcCCCHHHHhc
Confidence 000001112378899999999999999999999 7788999999998877764
No 120
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=8.7e-45 Score=308.06 Aligned_cols=255 Identities=25% Similarity=0.440 Sum_probs=208.7
Q ss_pred cccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCCe
Q 035861 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHDS 91 (332)
Q Consensus 12 ~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 91 (332)
+|++++.||.|++|.||++++..+++.+++|.+......... ...+..|+..+++++|+|++++++.+...+..
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~------~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 74 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRE------RKAAEQEAQLLSQLKHPNIVAYRESWEGEDGL 74 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHH------HHHHHHHHHHHHhCCCCCeeeeeeeecCCCCE
Confidence 589999999999999999999988999999998754332211 11356899999999999999999987555567
Q ss_pred EEEEccccccc-HHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCC
Q 035861 92 VYMVMEYMEHD-LKWLMESM-KQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGS 169 (332)
Q Consensus 92 ~~lv~e~~~~~-l~~~~~~~-~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~ 169 (332)
.++++|+++++ +.+.+... ...+++..+..++.|++.||++||+.|++|+||+|+||+++.++.++|+|||.+.....
T Consensus 75 ~~lv~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~ 154 (257)
T cd08223 75 LYIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLTRTNIIKVGDLGIARVLEN 154 (257)
T ss_pred EEEEecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEEecCCcEEEecccceEEecc
Confidence 89999999864 54445442 34689999999999999999999999999999999999999999999999999877644
Q ss_pred CCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCCc
Q 035861 170 PLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELP 249 (332)
Q Consensus 170 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (332)
.........++..|+|||.+.+ ..++.++|+||||+++|++++|..||...+.......+......
T Consensus 155 ~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~------------- 220 (257)
T cd08223 155 QCDMASTLIGTPYYMSPELFSN-KPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIEGKLP------------- 220 (257)
T ss_pred cCCccccccCCcCccChhHhcC-CCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCC-------------
Confidence 3333445567889999999877 67889999999999999999999999876655444443322110
Q ss_pred cccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCC
Q 035861 250 GAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWF 309 (332)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f 309 (332)
..+..+++.+.+|+.+||+.+|++||++.++++||||
T Consensus 221 -----------------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~~ 257 (257)
T cd08223 221 -----------------------PMPKDYSPELGELIATMLSKRPEKRPSVKSILRQPYI 257 (257)
T ss_pred -----------------------CCccccCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 1112378899999999999999999999999999997
No 121
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.4e-45 Score=327.14 Aligned_cols=281 Identities=25% Similarity=0.382 Sum_probs=207.9
Q ss_pred hcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCC
Q 035861 11 FEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHD 90 (332)
Q Consensus 11 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 90 (332)
.+|++++.||+|+||.||+|++..+++.||+|+.... ....|+.++++++|+||+++++.+... .
T Consensus 66 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~--------------~~~~E~~~l~~l~h~~iv~~~~~~~~~-~ 130 (357)
T PHA03209 66 LGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG--------------TTLIEAMLLQNVNHPSVIRMKDTLVSG-A 130 (357)
T ss_pred cCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc--------------ccHHHHHHHHhCCCCCCcChhheEEeC-C
Confidence 4799999999999999999999999999999974321 234799999999999999999998555 7
Q ss_pred eEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCCC
Q 035861 91 SVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSP 170 (332)
Q Consensus 91 ~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~~ 170 (332)
..++|+|++.+++.+.+......+++..+..++.||+.||+|||++||+|+||||+||+++.++.++|+|||.+......
T Consensus 131 ~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~ 210 (357)
T PHA03209 131 ITCMVLPHYSSDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVA 210 (357)
T ss_pred eeEEEEEccCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEecCccccccccC
Confidence 78999999999998888877788999999999999999999999999999999999999999999999999998753221
Q ss_pred CCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCC-Ch---------HHHHHHHHHHcCCCCCC
Q 035861 171 LKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGT-TE---------VDQIDKIFKTLGTPTET 240 (332)
Q Consensus 171 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~-~~---------~~~~~~~~~~~~~~~~~ 240 (332)
.......|+..|+|||++.+ ..++.++|+||||+++|+|+++..|+... .. ......+....+..+..
T Consensus 211 -~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 288 (357)
T PHA03209 211 -PAFLGLAGTVETNAPEVLAR-DKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEE 288 (357)
T ss_pred -cccccccccccccCCeecCC-CCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChhh
Confidence 22234568999999999877 67899999999999999999865554322 11 11222333333322222
Q ss_pred cccCCC-CCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCC
Q 035861 241 IWPGLS-ELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEV 312 (332)
Q Consensus 241 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~ 312 (332)
...... ............ .+.............++..+.+||.+||+.||.+|||++|+|+||||+++
T Consensus 289 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~hp~f~~~ 357 (357)
T PHA03209 289 FPRDPGSRLVRGFIEYASL----ERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILNYPMFAQL 357 (357)
T ss_pred cCCCCccHHHHHHHhhccc----CCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHhcCchhccC
Confidence 110000 000000000000 00000000001112367788899999999999999999999999999874
No 122
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=1.7e-45 Score=323.76 Aligned_cols=278 Identities=23% Similarity=0.352 Sum_probs=216.9
Q ss_pred hcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCC
Q 035861 11 FEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHD 90 (332)
Q Consensus 11 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 90 (332)
++|++++.||+|+||+||+++...+++.+|+|++.......... ...+.+|+.++..+.|++|+.+++.+. +..
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~-----~~~~~~e~~~l~~~~~~~i~~~~~~~~-~~~ 74 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAE-----TACFREERDVLVNGDNQWITTLHYAFQ-DEN 74 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhH-----HHHHHHHHHHHhhCCCCCEeeEEEEEe-cCC
Confidence 47999999999999999999999999999999986532211111 113567888999999999999999884 448
Q ss_pred eEEEEcccccc-cHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCC
Q 035861 91 SVYMVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGS 169 (332)
Q Consensus 91 ~~~lv~e~~~~-~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~ 169 (332)
..++||||++| ++.+.+......+++..+..++.||+.||.|||++|++|+||||+||+++.++.++|+|||++.....
T Consensus 75 ~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~ 154 (332)
T cd05623 75 NLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLME 154 (332)
T ss_pred EEEEEEeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEeecchheeccc
Confidence 89999999986 55555555467899999999999999999999999999999999999999999999999999875432
Q ss_pred CCC-CCccccccccccchhhhcC----CCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccC
Q 035861 170 PLK-PYTSLVVTLWYRAPELLLG----AKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPG 244 (332)
Q Consensus 170 ~~~-~~~~~~~~~~y~aPE~~~~----~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (332)
... ......|++.|+|||++.. ...++.++|+||||+++|+|++|..||...+..+....+........ +
T Consensus 155 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~---~-- 229 (332)
T cd05623 155 DGTVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQ---F-- 229 (332)
T ss_pred CCcceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCcccc---C--
Confidence 211 2234578999999999862 34678899999999999999999999998877766666543211000 0
Q ss_pred CCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCC--CCCHHHHhcCCCCCCCCCCCCCCCCC
Q 035861 245 LSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEK--RITVDDALNHYWFHEVPLPKSKDFMP 322 (332)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~--Rps~~ell~hp~f~~~~~~~~~~~~~ 322 (332)
......++.++++||++||..++.+ |++++++++||||..+.+........
T Consensus 230 ---------------------------p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h~~f~~~~~~~~~~~~~ 282 (332)
T cd05623 230 ---------------------------PAQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQHPFFTGIDWDNIRNCEA 282 (332)
T ss_pred ---------------------------CCccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCCCCcCCCCHHHHhhCCC
Confidence 0011237899999999999765544 68999999999999988666554444
Q ss_pred CCCC
Q 035861 323 TFPP 326 (332)
Q Consensus 323 ~~~~ 326 (332)
++.|
T Consensus 283 ~~~~ 286 (332)
T cd05623 283 PYIP 286 (332)
T ss_pred CccC
Confidence 4444
No 123
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=1.6e-45 Score=317.12 Aligned_cols=275 Identities=22% Similarity=0.385 Sum_probs=213.1
Q ss_pred cccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCCe
Q 035861 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHDS 91 (332)
Q Consensus 12 ~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 91 (332)
.|++.+.||+|+||+||++.+..+++.||+|.+.......... ...+..|+.++++++|++++++.+.+..+ ..
T Consensus 1 ~f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~-----~~~~~~E~~il~~l~~~~i~~~~~~~~~~-~~ 74 (285)
T cd05630 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKG-----ESMALNEKQILEKVNSRFVVSLAYAYETK-DA 74 (285)
T ss_pred CceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHH-----HHHHHHHHHHHHhCCCCCeeeeeEEEecC-CE
Confidence 4788899999999999999999999999999987543322111 11356799999999999999999998554 78
Q ss_pred EEEEcccccccHH-HHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCC
Q 035861 92 VYMVMEYMEHDLK-WLMESM-KQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGS 169 (332)
Q Consensus 92 ~~lv~e~~~~~l~-~~~~~~-~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~ 169 (332)
.++||||++|+.+ +.+... ...+++..+..++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||.+.....
T Consensus 75 ~~lv~e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~ 154 (285)
T cd05630 75 LCLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLDDHGHIRISDLGLAVHVPE 154 (285)
T ss_pred EEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeccceeecCC
Confidence 9999999986544 444332 34689999999999999999999999999999999999999999999999998875432
Q ss_pred CCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCCc
Q 035861 170 PLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELP 249 (332)
Q Consensus 170 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (332)
. .......|+..|+|||++.. ..++.++|+||+|+++|+|++|..||...................
T Consensus 155 ~-~~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~------------ 220 (285)
T cd05630 155 G-QTIKGRVGTVGYMAPEVVKN-ERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEV------------ 220 (285)
T ss_pred C-ccccCCCCCccccChHHHcC-CCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhhhhh------------
Confidence 2 22234568899999999976 668999999999999999999999997654321111111100000
Q ss_pred cccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCC-----HHHHhcCCCCCCCCCCCCCC--CCC
Q 035861 250 GAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRIT-----VDDALNHYWFHEVPLPKSKD--FMP 322 (332)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps-----~~ell~hp~f~~~~~~~~~~--~~~ 322 (332)
.......+++++.+|+.+||+.||++||| ++|+++||||+.+.+..... ..+
T Consensus 221 ---------------------~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~ 279 (285)
T cd05630 221 ---------------------QEEYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEHPLFKQINFKRLEAGMLEP 279 (285)
T ss_pred ---------------------hhhcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcChhhhccCHHHHhcCCCCC
Confidence 00012236888999999999999999999 99999999999877665433 445
Q ss_pred CCCCc
Q 035861 323 TFPPQ 327 (332)
Q Consensus 323 ~~~~~ 327 (332)
++.|+
T Consensus 280 ~~~~~ 284 (285)
T cd05630 280 PFKPD 284 (285)
T ss_pred CCCCC
Confidence 66664
No 124
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=6.5e-45 Score=318.36 Aligned_cols=282 Identities=39% Similarity=0.736 Sum_probs=207.0
Q ss_pred cccccccCcEEEEEEEECC--CCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEc-CCCeE
Q 035861 16 LNKISEGTYGIVYRARDKK--SGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMD-DHDSV 92 (332)
Q Consensus 16 ~~~lg~g~~g~v~~~~~~~--~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~ 92 (332)
..+||+|+||+||+|+... ++..||+|.+...... ..+.+|+.+++.++||||+++++++.. .+...
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~~----------~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 75 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGIS----------MSACREIALLRELKHPNVIALQKVFLSHSDRKV 75 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCCCc----------HHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeE
Confidence 4679999999999999653 5688999988643211 135689999999999999999998854 34678
Q ss_pred EEEcccccccHHHHHHhc--------CCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEE----cCCCcEEEee
Q 035861 93 YMVMEYMEHDLKWLMESM--------KQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLL----NNQGVLKICD 160 (332)
Q Consensus 93 ~lv~e~~~~~l~~~~~~~--------~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili----~~~~~~~l~d 160 (332)
++|+||+++++.+.+... ...+++..++.++.||+.||.|||+.|++|+||||+||++ +.++.++|+|
T Consensus 76 ~lv~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~D 155 (317)
T cd07867 76 WLLFDYAEHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIAD 155 (317)
T ss_pred EEEEeeeCCcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCCcEEEee
Confidence 999999999887766431 2358899999999999999999999999999999999999 4567999999
Q ss_pred cccccccCCCCC---CCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCh---------HHHHH
Q 035861 161 FGMSRQYGSPLK---PYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTE---------VDQID 228 (332)
Q Consensus 161 f~~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~---------~~~~~ 228 (332)
||++........ ......++..|+|||.+.+...++.++|+||||+++|+|+||..||..... .....
T Consensus 156 fG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~ 235 (317)
T cd07867 156 MGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLD 235 (317)
T ss_pred ccceeccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccccccccccccccHHHHH
Confidence 999986543322 223456788999999998756789999999999999999999999975432 23344
Q ss_pred HHHHHcCCCCCCcccCCCCCcccc---ccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhc
Q 035861 229 KIFKTLGTPTETIWPGLSELPGAK---ANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALN 305 (332)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 305 (332)
.+....+.+....+..+...+... .......... ..............+..+++||.+||+.||.+|||++|+|+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~ 313 (317)
T cd07867 236 RIFSVMGFPADKDWEDIRKMPEYPTLQKDFRRTTYAN--SSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQ 313 (317)
T ss_pred HHHHhcCCCChhhhhhhhhcccchhhhhhhcccccCC--chhhhhhhcccCCCChHHHHHHHHHhccCcccccCHHHHhc
Confidence 555555555555544433322110 0000000000 00000011112235677899999999999999999999999
Q ss_pred CCCC
Q 035861 306 HYWF 309 (332)
Q Consensus 306 hp~f 309 (332)
||||
T Consensus 314 hp~f 317 (317)
T cd07867 314 DPYF 317 (317)
T ss_pred CCCC
Confidence 9998
No 125
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=1.3e-44 Score=314.31 Aligned_cols=292 Identities=46% Similarity=0.837 Sum_probs=230.2
Q ss_pred ccccchhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeee
Q 035861 5 QGCRSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEV 84 (332)
Q Consensus 5 ~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~ 84 (332)
+|.+..++|++.+.||.|++|+||+|.+..+++.|++|++........ ....+.+|+.++++++|||++++++.
T Consensus 1 ~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~------~~~~~~~e~~~~~~l~h~~i~~~~~~ 74 (302)
T cd07864 1 WGKRCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEG------FPITAIREIKILRQLNHRNIVNLKEI 74 (302)
T ss_pred CchhhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccC------chHHHHHHHHHHHhCCCCCeeeeehe
Confidence 366788999999999999999999999999999999999875432221 11245689999999999999999998
Q ss_pred EEcCC---------CeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCc
Q 035861 85 VMDDH---------DSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGV 155 (332)
Q Consensus 85 ~~~~~---------~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~ 155 (332)
+.+.. ...++|+||+++++...+......+++..+..++.|++.||+|||+.|++|+||+|+||+++.++.
T Consensus 75 ~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~ 154 (302)
T cd07864 75 VTDKQDALDFKKDKGAFYLVFEYMDHDLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLNNKGQ 154 (302)
T ss_pred ecCcchhhhccccCCcEEEEEcccCccHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCc
Confidence 85442 378999999999888777765667999999999999999999999999999999999999999999
Q ss_pred EEEeecccccccCCCC-CCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHc
Q 035861 156 LKICDFGMSRQYGSPL-KPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTL 234 (332)
Q Consensus 156 ~~l~df~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~ 234 (332)
++|+|||.+....... .......++..|+|||.+.+...++.++|+||||+++|+|++|..||...+..+....+....
T Consensus 155 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~ 234 (302)
T cd07864 155 IKLADFGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLC 234 (302)
T ss_pred EEeCcccccccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHh
Confidence 9999999987654322 122333457789999998765567899999999999999999999999888888888887776
Q ss_pred CCCCCCcccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCC
Q 035861 235 GTPTETIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWF 309 (332)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f 309 (332)
+.+....++.+...+........... ..........++..+.++|.+||+.||++||++++++.||||
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~ 302 (302)
T cd07864 235 GSPCPAVWPDVIKLPYFNTMKPKKQY-------RRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALNSPWL 302 (302)
T ss_pred CCCChhhccccccccccccccccccc-------ccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhcCCCC
Confidence 66666665554433221110000000 000001122368889999999999999999999999999997
No 126
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=1.5e-44 Score=312.85 Aligned_cols=285 Identities=48% Similarity=0.855 Sum_probs=222.1
Q ss_pred hcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCC-CCCeeeeeeeEEcCC
Q 035861 11 FEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFD-HPSIVNVKEVVMDDH 89 (332)
Q Consensus 11 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~ 89 (332)
++|++.+.||.|++|.||+|.+..+++.||+|.+....... .....+.+|+.+++.+. |+||+++++.+....
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~------~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~ 74 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEE------GIPPTALREISLLQMLSESIYIVRLLDVEHVEE 74 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhcccc------CCchHHHHHHHHHHHccCCCCccceeeeEeecC
Confidence 47999999999999999999999999999999986543221 11224568999999995 699999999885542
Q ss_pred C----eEEEEcccccccHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcC-CCcEEEee
Q 035861 90 D----SVYMVMEYMEHDLKWLMESM----KQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNN-QGVLKICD 160 (332)
Q Consensus 90 ~----~~~lv~e~~~~~l~~~~~~~----~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~-~~~~~l~d 160 (332)
. ..|+||||+++++.+.+... ...+++..++.++.||+.||+|||++|++|+||+|+||+++. ++.++|+|
T Consensus 75 ~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~~~~~~~kl~d 154 (295)
T cd07837 75 KNGKPSLYLVFEYLDSDLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDKQKGLLKIAD 154 (295)
T ss_pred CCCCceEEEEeeccCcCHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEecCCCeEEEee
Confidence 2 37999999999887776543 245899999999999999999999999999999999999998 88999999
Q ss_pred cccccccCCCCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCC
Q 035861 161 FGMSRQYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTET 240 (332)
Q Consensus 161 f~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 240 (332)
||.+..............+++.|+|||.+.+...++.++|+||||+++|+|++|..||...+.......+......+...
T Consensus 155 fg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (295)
T cd07837 155 LGLGRAFSIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQ 234 (295)
T ss_pred cccceecCCCccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCChh
Confidence 99987654433333444567889999998765668999999999999999999999999888888777777766655554
Q ss_pred cccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCC
Q 035861 241 IWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFH 310 (332)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~ 310 (332)
.++.......... .... .+.......+.++.++.+||.+||..||.+||+++|++.||||.
T Consensus 235 ~~~~~~~~~~~~~-~~~~--------~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~~~~~ 295 (295)
T cd07837 235 VWPGVSKLRDWHE-FPQW--------KPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTHPYFD 295 (295)
T ss_pred hCcchhhccchhh-cCcc--------cchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhcCCCcC
Confidence 4443322211100 0000 00001111234789999999999999999999999999999995
No 127
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=1.7e-44 Score=314.66 Aligned_cols=291 Identities=43% Similarity=0.780 Sum_probs=222.0
Q ss_pred ccchhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEE
Q 035861 7 CRSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVM 86 (332)
Q Consensus 7 ~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~ 86 (332)
+..+++|++.+.||+|++|.||+|.+..+++.||||.+........ ......+|+..++++.||||+++++++.
T Consensus 8 ~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~------~~~~~~~e~~~l~~l~h~~iv~~~~~~~ 81 (310)
T cd07865 8 CDEVSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEG------FPITALREIKILQLLKHENVVNLIEICR 81 (310)
T ss_pred cchhhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCC------chhHHHHHHHHHHhCCCCCccceEEEEe
Confidence 4467799999999999999999999999999999999865432211 1123457999999999999999999875
Q ss_pred cCC-------CeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEe
Q 035861 87 DDH-------DSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKIC 159 (332)
Q Consensus 87 ~~~-------~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~ 159 (332)
... ...++|+||+++++.+.+......+++..++.++.|++.||+|||++|++|+||+|+||+++.++.++|+
T Consensus 82 ~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~ 161 (310)
T cd07865 82 TKATPYNRYKGSFYLVFEFCEHDLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILITKDGILKLA 161 (310)
T ss_pred cccccccCCCceEEEEEcCCCcCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECCCCcEEEC
Confidence 432 3569999999998888777666689999999999999999999999999999999999999999999999
Q ss_pred ecccccccCCCCC----CCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcC
Q 035861 160 DFGMSRQYGSPLK----PYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLG 235 (332)
Q Consensus 160 df~~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~ 235 (332)
|||.+........ ......++..|+|||.+.+...++.++|+||||+++|+|++|..||...+.......+....+
T Consensus 162 dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~ 241 (310)
T cd07865 162 DFGLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCG 241 (310)
T ss_pred cCCCcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhC
Confidence 9999876533211 112345678899999987655678899999999999999999999988777666666665555
Q ss_pred CCCCCcccCCCCCccccc-cccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCC
Q 035861 236 TPTETIWPGLSELPGAKA-NFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWF 309 (332)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f 309 (332)
..+...++.......... .............. .....+..+++||.+||..||.+||+++++|+||||
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l------~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h~~f 310 (310)
T cd07865 242 SITPEVWPGVDKLELFKKMELPQGQKRKVKERL------KPYVKDPHALDLIDKLLVLDPAKRIDADTALNHDFF 310 (310)
T ss_pred CCChhhcccccchhhhhhccCCCccchhhHHhc------ccccCCHHHHHHHHHHhcCChhhccCHHHHhcCCCC
Confidence 555554444332211100 00000000000000 111246778899999999999999999999999998
No 128
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=7.1e-45 Score=312.84 Aligned_cols=280 Identities=39% Similarity=0.670 Sum_probs=215.8
Q ss_pred ccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhC-CCCCeeeeeeeEEcCC-C
Q 035861 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSF-DHPSIVNVKEVVMDDH-D 90 (332)
Q Consensus 13 y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~-~ 90 (332)
|++.+.||.|++|.||+|.+..++..+|+|.+......... .....|+..+.++ .|+|++++++.+.++. .
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~-------~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~ 73 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQ-------VNNLREIQALRRLSPHPNILRLIEVLFDRKTG 73 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchh-------hhHHHHHHHHhhcCCCCCccceEEEEecCCCC
Confidence 77899999999999999999999999999998654322111 1234788888888 4999999999985432 6
Q ss_pred eEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCCC
Q 035861 91 SVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSP 170 (332)
Q Consensus 91 ~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~~ 170 (332)
..++|+||++|++++.+......+++..++.++.|++.||++||+.|++|+||+|+||+++. +.++|+|||.+......
T Consensus 74 ~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~ 152 (282)
T cd07831 74 RLALVFELMDMNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIKD-DILKLADFGSCRGIYSK 152 (282)
T ss_pred cEEEEEecCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEcC-CCeEEEecccccccccC
Confidence 78999999999998888776678999999999999999999999999999999999999999 99999999998765332
Q ss_pred CCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCCcc
Q 035861 171 LKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPG 250 (332)
Q Consensus 171 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (332)
.......++..|+|||.+.....++.++|+||||+++|+|++|..||...+..+....+....+.+.+.+.........
T Consensus 153 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (282)
T cd07831 153 -PPYTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRH 231 (282)
T ss_pred -CCcCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhccccc
Confidence 2223445788999999876656788999999999999999999999998887777777766555444432111100000
Q ss_pred ccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCC
Q 035861 251 AKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWF 309 (332)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f 309 (332)
......... ........+.++.++.+||.+||+.+|++||+++++++||||
T Consensus 232 ~~~~~~~~~--------~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~~~~ 282 (282)
T cd07831 232 MNYNFPSKK--------GTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRHPYF 282 (282)
T ss_pred ccccCcccc--------cccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhCCCC
Confidence 000000000 000011123468999999999999999999999999999998
No 129
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=4.3e-46 Score=316.51 Aligned_cols=259 Identities=36% Similarity=0.598 Sum_probs=208.7
Q ss_pred ccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCCeE
Q 035861 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHDSV 92 (332)
Q Consensus 13 y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 92 (332)
|++++.||+|+||+||++++..+++.+|+|++........... ....|+..+++++|+||+++++++.. ....
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~------~~~~e~~~~~~l~~~~i~~~~~~~~~-~~~~ 73 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEERE------ENIREIKILRRLRHPNIVQILDVFQD-DNYL 73 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHH------HHHHHHHHHHHHTBTTBCHEEEEEEE-SSEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccc------hhhhhhhccccccccccccccccccc-cccc
Confidence 7899999999999999999999999999999987654332211 12358999999999999999999955 4888
Q ss_pred EEEcccccc-cHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCCCC
Q 035861 93 YMVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPL 171 (332)
Q Consensus 93 ~lv~e~~~~-~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~~~ 171 (332)
++|||++++ ++.+.+. ....+++..++.++.||+.||++||++|++|+||+|+||+++.++.++|+|||.+.......
T Consensus 74 ~~v~~~~~~~~L~~~l~-~~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~~ 152 (260)
T PF00069_consen 74 YIVMEYCPGGSLQDYLQ-KNKPLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILLDENGEVKLIDFGSSVKLSENN 152 (260)
T ss_dssp EEEEEEETTEBHHHHHH-HHSSBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEESTTSEEEESSGTTTEESTSTT
T ss_pred ccccccccccccccccc-cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 999999998 5555555 56789999999999999999999999999999999999999999999999999987643334
Q ss_pred CCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCCccc
Q 035861 172 KPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGA 251 (332)
Q Consensus 172 ~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (332)
.......++..|+|||++......+.++|+||||+++|+|++|..||...+.......+............
T Consensus 153 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~--------- 223 (260)
T PF00069_consen 153 ENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPLPSSS--------- 223 (260)
T ss_dssp SEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHHHT---------
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccc---------
Confidence 44556678899999999884478999999999999999999999999987433333333222111100000
Q ss_pred cccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCC
Q 035861 252 KANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWF 309 (332)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f 309 (332)
......+..+.++|.+||+.||++||++.++++||||
T Consensus 224 ---------------------~~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~~~~~ 260 (260)
T PF00069_consen 224 ---------------------QQSREKSEELRDLIKKMLSKDPEQRPSAEELLKHPWF 260 (260)
T ss_dssp ---------------------TSHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHTSGGG
T ss_pred ---------------------cccchhHHHHHHHHHHHccCChhHCcCHHHHhcCCCC
Confidence 0000023788999999999999999999999999998
No 130
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=6e-45 Score=314.56 Aligned_cols=260 Identities=32% Similarity=0.453 Sum_probs=213.5
Q ss_pred hcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCC
Q 035861 11 FEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHD 90 (332)
Q Consensus 11 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 90 (332)
++|++.+.||.|++|.||++.+..+++.+|+|++.......... ...+.+|++.++++.||||+++++.+.. ..
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~-----~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~ 74 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQ-----VEHVLNEKRILQSIRHPFLVNLYGSFQD-DS 74 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhH-----HHHHHHHHHHHHhCCCCCccceeeEEEc-CC
Confidence 47999999999999999999999999999999987543211111 1245689999999999999999999854 47
Q ss_pred eEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCCC
Q 035861 91 SVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSP 170 (332)
Q Consensus 91 ~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~~ 170 (332)
..++||||++++.+.......+.+++..+..++.||+.||.+||+.|++|+||+|.||+++.++.++|+|||.+......
T Consensus 75 ~~~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~ 154 (290)
T cd05580 75 NLYLVMEYVPGGELFSHLRKSGRFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR 154 (290)
T ss_pred eEEEEEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEeeCCCccccCCC
Confidence 89999999965444444444678999999999999999999999999999999999999999999999999998765433
Q ss_pred CCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCCcc
Q 035861 171 LKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPG 250 (332)
Q Consensus 171 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (332)
.....+++.|+|||.+.+ ...+.++|+||||+++|+|++|..||...........+.....
T Consensus 155 ---~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~--------------- 215 (290)
T cd05580 155 ---TYTLCGTPEYLAPEIILS-KGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKILEGKV--------------- 215 (290)
T ss_pred ---CCCCCCCccccChhhhcC-CCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCc---------------
Confidence 234567889999999876 5688999999999999999999999987775544444432111
Q ss_pred ccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCC-----CHHHHhcCCCCCCCCCCCC
Q 035861 251 AKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRI-----TVDDALNHYWFHEVPLPKS 317 (332)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp-----s~~ell~hp~f~~~~~~~~ 317 (332)
..+..++..++++|.+||..||.+|+ +++|+++||||..+.+...
T Consensus 216 ----------------------~~~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~~~~~ 265 (290)
T cd05580 216 ----------------------RFPSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNHPWFAGIDWIAL 265 (290)
T ss_pred ----------------------cCCccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHcCcccccCCHHHH
Confidence 01122688899999999999999999 9999999999999986554
No 131
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=2.8e-45 Score=322.08 Aligned_cols=279 Identities=23% Similarity=0.352 Sum_probs=217.5
Q ss_pred hcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCC
Q 035861 11 FEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHD 90 (332)
Q Consensus 11 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 90 (332)
++|++++.||+|+||+||++++..+++.||+|++......... ....+.+|..++..+.|++|+.+++.+. +..
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~-----~~~~~~~e~~~l~~~~~~~i~~l~~~~~-~~~ 74 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRA-----ETACFREERNVLVNGDCQWITTLHYAFQ-DEN 74 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhH-----HHHHHHHHHHHHHhCCCCCEeeEEEEEE-cCC
Confidence 4799999999999999999999999999999998753211111 0113567889999999999999999984 458
Q ss_pred eEEEEccccccc-HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCC
Q 035861 91 SVYMVMEYMEHD-LKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGS 169 (332)
Q Consensus 91 ~~~lv~e~~~~~-l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~ 169 (332)
..|+||||+.|+ +.+.+......+++..+..++.|++.||+|||++||+|+||||+||+++.++.++|+|||++.....
T Consensus 75 ~~~lv~Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 154 (331)
T cd05624 75 YLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQ 154 (331)
T ss_pred EEEEEEeCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEEcCCCCEEEEeccceeeccC
Confidence 899999999865 5555554467899999999999999999999999999999999999999999999999999876543
Q ss_pred CCC-CCccccccccccchhhhcCC----CCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccC
Q 035861 170 PLK-PYTSLVVTLWYRAPELLLGA----KKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPG 244 (332)
Q Consensus 170 ~~~-~~~~~~~~~~y~aPE~~~~~----~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (332)
... ......|++.|+|||++... ..++.++|+||||+++|+|++|..||...+..+....+.........
T Consensus 155 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~----- 229 (331)
T cd05624 155 DGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQF----- 229 (331)
T ss_pred CCceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHHHHHHHcCCCcccC-----
Confidence 222 12235689999999998642 35788999999999999999999999887776666655432111000
Q ss_pred CCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCC--CCCHHHHhcCCCCCCCCCCCCCCCCC
Q 035861 245 LSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEK--RITVDDALNHYWFHEVPLPKSKDFMP 322 (332)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~--Rps~~ell~hp~f~~~~~~~~~~~~~ 322 (332)
+ .....++.++++||.+||..++.+ |++++++++||||..+.|...+...+
T Consensus 230 -----------------------p----~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h~~f~~~~~~~~~~~~~ 282 (331)
T cd05624 230 -----------------------P----SHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKHAFFEGIDWENIRNLEA 282 (331)
T ss_pred -----------------------C----CccccCCHHHHHHHHHHccCchhhcCCCCHHHHhcCCCcCCCCHHHHhhCCC
Confidence 0 001226889999999999976654 46899999999999987766655554
Q ss_pred CCCCc
Q 035861 323 TFPPQ 327 (332)
Q Consensus 323 ~~~~~ 327 (332)
++.|.
T Consensus 283 ~~~p~ 287 (331)
T cd05624 283 PYIPD 287 (331)
T ss_pred CccCC
Confidence 44444
No 132
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=8.9e-45 Score=321.89 Aligned_cols=298 Identities=35% Similarity=0.571 Sum_probs=225.9
Q ss_pred chhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcC
Q 035861 9 SVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDD 88 (332)
Q Consensus 9 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 88 (332)
..++|++.+.||+|++|.||++.+..+++.||+|++......... ...+.+|+.++++++|+||+++++.+...
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~------~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 87 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTH------AKRAYRELVLMKLVNHKNIIGLLNVFTPQ 87 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhH------HHHHHHHHHHHHhcCCCCCcceeeeeccC
Confidence 467899999999999999999999999999999998643221111 11345799999999999999999987433
Q ss_pred C-----CeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeeccc
Q 035861 89 H-----DSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGM 163 (332)
Q Consensus 89 ~-----~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~ 163 (332)
. ...|+|+|++++++...+.. .+++..+..++.|++.||++||++|++|+||||+||+++.++.++|+|||.
T Consensus 88 ~~~~~~~~~~lv~e~~~~~l~~~~~~---~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~~~~~~~kL~Dfg~ 164 (353)
T cd07850 88 KSLEEFQDVYLVMELMDANLCQVIQM---DLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGL 164 (353)
T ss_pred CCccccCcEEEEEeccCCCHHHHHhh---cCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCcc
Confidence 2 35799999999988776654 289999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCccc
Q 035861 164 SRQYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWP 243 (332)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (332)
+....... ......++..|+|||.+.+ ..++.++|+||||+++|+|++|..||...+.......+....+.++.....
T Consensus 165 ~~~~~~~~-~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (353)
T cd07850 165 ARTAGTSF-MMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMS 242 (353)
T ss_pred ceeCCCCC-CCCCCcccccccCHHHHhC-CCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHH
Confidence 98654322 2234467888999999977 678999999999999999999999999888888788887776666554333
Q ss_pred CCCCCccccccc-cCCchhhhhhh-----CCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCCCCCC
Q 035861 244 GLSELPGAKANF-AKQPYNLLRKR-----FPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVPLPKS 317 (332)
Q Consensus 244 ~~~~~~~~~~~~-~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~~~ 317 (332)
.+.......... ........... .+..........+..+++||.+||+.||++||++.|+|.||||..|-.++.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~~~~~~~~~~~~ 322 (353)
T cd07850 243 RLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQHPYINVWYDPSE 322 (353)
T ss_pred HhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcChhHhhccCCcc
Confidence 322111100000 00000000011 111111113346778899999999999999999999999999987665444
No 133
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=1.4e-44 Score=317.75 Aligned_cols=294 Identities=24% Similarity=0.374 Sum_probs=211.9
Q ss_pred hhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCC
Q 035861 10 VFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDH 89 (332)
Q Consensus 10 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 89 (332)
.++|++.+.||.|+||.||++.+..++..+|+|++....... ....+.+|+++++.++|+||+++++.+.++
T Consensus 4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~-------~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~- 75 (333)
T cd06650 4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPA-------IRNQIIRELQVLHECNSPYIVGFYGAFYSD- 75 (333)
T ss_pred hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHH-------HHHHHHHHHHHHHHCCCCcccceeEEEEEC-
Confidence 468999999999999999999999999999999887542211 012467899999999999999999999554
Q ss_pred CeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC-CcccccCCCCCEEEcCCCcEEEeecccccccC
Q 035861 90 DSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDN-WVLHRDLKTSNLLLNNQGVLKICDFGMSRQYG 168 (332)
Q Consensus 90 ~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~-~i~H~di~p~Nili~~~~~~~l~df~~~~~~~ 168 (332)
...++||||++|+.+..+....+.+++..+..++.|++.||+|||+. +++|+||||+||+++.++.++|+|||++....
T Consensus 76 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~ 155 (333)
T cd06650 76 GEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI 155 (333)
T ss_pred CEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcCCCCEEEeeCCcchhhh
Confidence 78999999998755554444467799999999999999999999975 79999999999999999999999999987553
Q ss_pred CCCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcC-CCCCCcc-cCCC
Q 035861 169 SPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLG-TPTETIW-PGLS 246 (332)
Q Consensus 169 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~ 246 (332)
.. ......++..|+|||.+.+ ..++.++|+||||+++|++++|..||................. .+..... +...
T Consensus 156 ~~--~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (333)
T cd06650 156 DS--MANSFVGTRSYMSPERLQG-THYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSPRPR 232 (333)
T ss_pred hh--ccccCCCCccccCHHHhcC-CCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCccccccCcccC
Confidence 22 2234468889999999976 6689999999999999999999999987654333221111000 0000000 0000
Q ss_pred CCccccccc---cCCc---hhhhhhhCCCCc-cCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCCC
Q 035861 247 ELPGAKANF---AKQP---YNLLRKRFPAAS-FTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVPL 314 (332)
Q Consensus 247 ~~~~~~~~~---~~~~---~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~ 314 (332)
......... .... ............ ......++.++++||.+||+.||++||+++|++.||||+....
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h~~~~~~~~ 307 (333)
T cd06650 233 PPGRPLSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSEA 307 (333)
T ss_pred CccchhhhhcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhhCHHHhcCcc
Confidence 000000000 0000 000000011111 1111236788999999999999999999999999999988653
No 134
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=5.7e-45 Score=315.00 Aligned_cols=266 Identities=25% Similarity=0.427 Sum_probs=214.3
Q ss_pred hcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCC
Q 035861 11 FEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHD 90 (332)
Q Consensus 11 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 90 (332)
+.|++++.||.|++|.||+|.+..++..+++|.+....... ...+.+|+..++.++|+|++++++.+..+ .
T Consensus 12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~--------~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-~ 82 (292)
T cd06644 12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEE--------LEDYMVEIEILATCNHPYIVKLLGAFYWD-G 82 (292)
T ss_pred hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHH--------HHHHHHHHHHHHhCCCCcEeeeEEEEEeC-C
Confidence 57999999999999999999999999999999986542111 12456799999999999999999998554 7
Q ss_pred eEEEEcccccccHHHHH-HhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCC
Q 035861 91 SVYMVMEYMEHDLKWLM-ESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGS 169 (332)
Q Consensus 91 ~~~lv~e~~~~~l~~~~-~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~ 169 (332)
..++||||++|+.+..+ ......+++..+..++.|++.+|++||+.|++|+||+|+||+++.++.++|+|||.+.....
T Consensus 83 ~~~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~ 162 (292)
T cd06644 83 KLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVK 162 (292)
T ss_pred eEEEEEecCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEEcCCCCEEEccCccceeccc
Confidence 89999999998765544 44456799999999999999999999999999999999999999999999999998876433
Q ss_pred CCCCCccccccccccchhhhcC----CCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCC
Q 035861 170 PLKPYTSLVVTLWYRAPELLLG----AKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGL 245 (332)
Q Consensus 170 ~~~~~~~~~~~~~y~aPE~~~~----~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (332)
.........++..|+|||.+.. ...++.++|+||||+++|+|++|..||...+......++..... +
T Consensus 163 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~--~------- 233 (292)
T cd06644 163 TLQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEP--P------- 233 (292)
T ss_pred cccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHHHHHHhcCCC--c-------
Confidence 3333345567889999998852 24568899999999999999999999987665444333322110 0
Q ss_pred CCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCCCCCCCC
Q 035861 246 SELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVPLPKSKD 319 (332)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~~~~~ 319 (332)
.......++.++.+||.+||..+|++||+++++++||||..+.+.+...
T Consensus 234 -------------------------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~~~~~~ 282 (292)
T cd06644 234 -------------------------TLSQPSKWSMEFRDFLKTALDKHPETRPSAAQLLEHPFVSSVTSNRPLR 282 (292)
T ss_pred -------------------------cCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHhcCccccccccchhHH
Confidence 0011223678899999999999999999999999999999988877543
No 135
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1e-44 Score=328.20 Aligned_cols=280 Identities=23% Similarity=0.328 Sum_probs=208.5
Q ss_pred hhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCC
Q 035861 10 VFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDH 89 (332)
Q Consensus 10 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 89 (332)
...|.+.+.||.|+||.||++.+..+++.||||.... ..+.+|+.++++++|+||+++++++..+
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~--------------~~~~~E~~iL~~L~HpnIv~l~~~~~~~- 232 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY--------------ASSVHEARLLRRLSHPAVLALLDVRVVG- 232 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc--------------cCHHHHHHHHHHCCCCCCCcEEEEEEEC-
Confidence 3479999999999999999999999999999995321 1345899999999999999999988554
Q ss_pred CeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCC
Q 035861 90 DSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGS 169 (332)
Q Consensus 90 ~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~ 169 (332)
...++|++++.+++...+......+++..++.++.||+.||+|||++||+|+||||+|||++.++.++|+|||++.....
T Consensus 233 ~~~~lv~e~~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~ 312 (461)
T PHA03211 233 GLTCLVLPKYRSDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVNGPEDICLGDFGAACFARG 312 (461)
T ss_pred CEEEEEEEccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEECCCCCEEEcccCCceeccc
Confidence 77899999999998888877667899999999999999999999999999999999999999999999999999876532
Q ss_pred CCC--CCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC-------hHHHHHHHHHHcCCCCCC
Q 035861 170 PLK--PYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTT-------EVDQIDKIFKTLGTPTET 240 (332)
Q Consensus 170 ~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~-------~~~~~~~~~~~~~~~~~~ 240 (332)
... ......||..|+|||++.+ ..++.++||||||+++|+|++|..|+.... ......+++.........
T Consensus 313 ~~~~~~~~~~~GT~~Y~APE~~~~-~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~ 391 (461)
T PHA03211 313 SWSTPFHYGIAGTVDTNAPEVLAG-DPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDE 391 (461)
T ss_pred ccccccccccCCCcCCcCHHHHcC-CCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhcccccc
Confidence 211 1224568999999999987 678999999999999999999876653321 122333333332221111
Q ss_pred cccCCCC-CccccccccCCchhhhhhhCCCCc---cCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCC
Q 035861 241 IWPGLSE-LPGAKANFAKQPYNLLRKRFPAAS---FTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHE 311 (332)
Q Consensus 241 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~ 311 (332)
....... +.. ... ........+... +.....++..+.+||.+||+.||.+|||+.|+|+||||++
T Consensus 392 ~~~~~~~~l~~---~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~hp~f~~ 460 (461)
T PHA03211 392 FPQHAGSRLVS---QYR---HRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRLPLFQS 460 (461)
T ss_pred CCCCcchHHHH---HHH---hhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhCcccCC
Confidence 1000000 000 000 000000011111 1111246778999999999999999999999999999975
No 136
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=1.3e-44 Score=307.95 Aligned_cols=259 Identities=27% Similarity=0.436 Sum_probs=208.7
Q ss_pred hcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCC
Q 035861 11 FEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHD 90 (332)
Q Consensus 11 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 90 (332)
+.|++.+.||.|++|.||.+.+..+++.+++|.+........... ....+.+|+..+++++||||+++++++..+ .
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-~ 77 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKK---EVNALECEIQLLKNLQHERIVQYYGCLRDD-E 77 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHH---HHHHHHHHHHHHHhCCCCCeeeeEEEEccC-C
Confidence 479999999999999999999998999999999875433221110 112456899999999999999999999554 7
Q ss_pred eEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCCC
Q 035861 91 SVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSP 170 (332)
Q Consensus 91 ~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~~ 170 (332)
..++|+|+++|+.+.......+.+++..+..++.|++.||++||+.|++|+||+|+||+++.++.++|+|||.+......
T Consensus 78 ~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~ 157 (263)
T cd06625 78 TLSIFMEYMPGGSVKDQLKAYGALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTI 157 (263)
T ss_pred eEEEEEEECCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccceecccc
Confidence 89999999987655544444678999999999999999999999999999999999999999999999999998755322
Q ss_pred CCC---CccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCC
Q 035861 171 LKP---YTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSE 247 (332)
Q Consensus 171 ~~~---~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (332)
... .....++..|+|||.+.+ ..++.++|+||||+++|++++|..||...+.......+.....
T Consensus 158 ~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~------------ 224 (263)
T cd06625 158 CSSGTGMKSVTGTPYWMSPEVISG-EGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPT------------ 224 (263)
T ss_pred ccccccccCCCcCccccCcceecc-CCCCchhhhHHHHHHHHHHHhCCCCccccchHHHHHHHhccCC------------
Confidence 111 123457788999999987 5689999999999999999999999987655544443322111
Q ss_pred CccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCC
Q 035861 248 LPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWF 309 (332)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f 309 (332)
....+..++..+.++|.+||..+|.+||++.++++||||
T Consensus 225 -----------------------~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~ 263 (263)
T cd06625 225 -----------------------NPQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRHFFV 263 (263)
T ss_pred -----------------------CCCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhCCCC
Confidence 011123378899999999999999999999999999998
No 137
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=1.5e-44 Score=315.94 Aligned_cols=272 Identities=29% Similarity=0.437 Sum_probs=217.7
Q ss_pred hcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCC
Q 035861 11 FEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHD 90 (332)
Q Consensus 11 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 90 (332)
.+|++.+.||+|++|+||++....+++.+|+|.+.......... ...+..|++.++.++|+||+++++.+.. ..
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~-----~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~ 74 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNK-----VKRVLTEQEILATLDHPFLPTLYASFQT-ET 74 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHH-----HHHHHHHHHHHHhCCCCCchhheeeeec-CC
Confidence 37999999999999999999999999999999997653322111 1246789999999999999999999844 47
Q ss_pred eEEEEccccccc-HHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccC
Q 035861 91 SVYMVMEYMEHD-LKWLMESM-KQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYG 168 (332)
Q Consensus 91 ~~~lv~e~~~~~-l~~~~~~~-~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~ 168 (332)
..|+||||+.|+ +.+.+... ...+++..+..++.|++.||+|||+.|++|+||||+||+++.++.++|+|||.+....
T Consensus 75 ~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~ 154 (316)
T cd05574 75 YLCLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLHESGHIMLSDFDLSKQSD 154 (316)
T ss_pred EEEEEEEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEcCCCCEEEeecchhhccc
Confidence 899999999874 44444332 3568999999999999999999999999999999999999999999999999886543
Q ss_pred CCCC-----------------------------CCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCC
Q 035861 169 SPLK-----------------------------PYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFS 219 (332)
Q Consensus 169 ~~~~-----------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~ 219 (332)
.... ......|+..|+|||.+.+ ..++.++|+||||+++|++++|..||.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Di~slG~ll~~l~~g~~pf~ 233 (316)
T cd05574 155 VEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISG-DGHGSAVDWWTLGILLYEMLYGTTPFK 233 (316)
T ss_pred ccccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcC-CCCCchHHHHHHHHHHHHHhhCCCCCC
Confidence 2111 1112356788999999976 568999999999999999999999998
Q ss_pred CCChHHHHHHHHHHcCCCCCCcccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCC
Q 035861 220 GTTEVDQIDKIFKTLGTPTETIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRIT 299 (332)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps 299 (332)
..+.......+...... ......++..++++|.+||+.||++||+
T Consensus 234 ~~~~~~~~~~~~~~~~~-----------------------------------~~~~~~~~~~~~~li~~~l~~~p~~R~s 278 (316)
T cd05574 234 GSNRDETFSNILKKEVT-----------------------------------FPGSPPVSSSARDLIRKLLVKDPSKRLG 278 (316)
T ss_pred CCchHHHHHHHhcCCcc-----------------------------------CCCccccCHHHHHHHHHHccCCHhHCCC
Confidence 77766555444321100 0011126889999999999999999999
Q ss_pred ----HHHHhcCCCCCCCCCCCCCCCCCCC
Q 035861 300 ----VDDALNHYWFHEVPLPKSKDFMPTF 324 (332)
Q Consensus 300 ----~~ell~hp~f~~~~~~~~~~~~~~~ 324 (332)
++++|.||||+++.++.++-..++-
T Consensus 279 ~~~~~~~ll~~~~~~~~~~~~~~~~~~~~ 307 (316)
T cd05574 279 SKRGAAEIKQHPFFRGVNWALIRHTTPPI 307 (316)
T ss_pred chhhHHHHHcCchhhcCChhhcccCCCCC
Confidence 9999999999999998887744443
No 138
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=1.2e-44 Score=312.14 Aligned_cols=286 Identities=34% Similarity=0.613 Sum_probs=218.1
Q ss_pred hcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCC
Q 035861 11 FEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHD 90 (332)
Q Consensus 11 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 90 (332)
++|++.+.||+|++|.||+|.+..+++.+|+|.+....... .....+.+|++.++.++|+||+++++.+ .+..
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~------~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~ 73 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDK------MVKKIAMREIRMLKQLRHENLVNLIEVF-RRKK 73 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcc------hhhHHHHHHHHHHHhcCCcchhhHHHhc-ccCC
Confidence 47999999999999999999999889999999986543222 1112456899999999999999999998 4558
Q ss_pred eEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCCC
Q 035861 91 SVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSP 170 (332)
Q Consensus 91 ~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~~ 170 (332)
..++|+||+++++++.+......+++..++.++.|++.||+|||+.|++|+||+|+||+++.++.++|+|||.+......
T Consensus 74 ~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~ 153 (286)
T cd07846 74 RLYLVFEFVDHTVLDDLEKYPNGLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAP 153 (286)
T ss_pred eEEEEEecCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCcEEEEeeeeeeeccCC
Confidence 89999999999888877766667999999999999999999999999999999999999999999999999998765443
Q ss_pred CCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCCcc
Q 035861 171 LKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPG 250 (332)
Q Consensus 171 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (332)
........++..|+|||.+.+...++.++|+||||+++|++++|..||......+....+..............+...+.
T Consensus 154 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (286)
T cd07846 154 GEVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPL 233 (286)
T ss_pred ccccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchH
Confidence 34344456788999999987656678899999999999999999999987766555555544332221110000000000
Q ss_pred ccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCC
Q 035861 251 AKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWF 309 (332)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f 309 (332)
....... ............+.++..+.+|+.+||+.+|++||++.++++||||
T Consensus 234 ~~~~~~~------~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~ 286 (286)
T cd07846 234 FAGMRLP------EVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHHEFF 286 (286)
T ss_pred hhccccc------cccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcCCCC
Confidence 0000000 0000000111234578999999999999999999999999999998
No 139
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=4.8e-45 Score=327.50 Aligned_cols=289 Identities=24% Similarity=0.336 Sum_probs=213.8
Q ss_pred hcccccccccccCcEEEEEEEEC--CCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcC
Q 035861 11 FEFEKLNKISEGTYGIVYRARDK--KSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDD 88 (332)
Q Consensus 11 ~~y~~~~~lg~g~~g~v~~~~~~--~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 88 (332)
.+|.+++.||.|++|.||++... .++..|++|.+.... ...+|+.++++++||||+++++.+. .
T Consensus 92 ~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~~-------------~~~~E~~il~~l~h~~iv~~~~~~~-~ 157 (392)
T PHA03207 92 MQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGGK-------------TPGREIDILKTISHRAIINLIHAYR-W 157 (392)
T ss_pred CceEEEEeecCCCCeEEEEEEEcCCccceeEEEEeccccc-------------cHHHHHHHHHhcCCCCccceeeeEe-e
Confidence 47999999999999999999764 356789999875421 2347999999999999999999884 4
Q ss_pred CCeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccC
Q 035861 89 HDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYG 168 (332)
Q Consensus 89 ~~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~ 168 (332)
....|++||++.+++...+. ....+++..+..++.||+.||+|||++||+|+||||+||+++.++.++|+|||++....
T Consensus 158 ~~~~~lv~e~~~~~l~~~l~-~~~~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~ 236 (392)
T PHA03207 158 KSTVCMVMPKYKCDLFTYVD-RSGPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFLDEPENAVLGDFGAACKLD 236 (392)
T ss_pred CCEEEEEehhcCCCHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEccCccccccC
Confidence 47899999999998888774 46789999999999999999999999999999999999999999999999999987654
Q ss_pred CCCC--CCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCh---HHHHHHHHHHcCCCCCCccc
Q 035861 169 SPLK--PYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTE---VDQIDKIFKTLGTPTETIWP 243 (332)
Q Consensus 169 ~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~---~~~~~~~~~~~~~~~~~~~~ 243 (332)
.... ......|+..|+|||.+.. ..++.++|+||||+++|+|++|..||..... ...+..+.+..+..+.....
T Consensus 237 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~ 315 (392)
T PHA03207 237 AHPDTPQCYGWSGTLETNSPELLAL-DPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQ 315 (392)
T ss_pred cccccccccccccccCccCHhHhcC-CCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCC
Confidence 3222 1234568999999999976 6789999999999999999999999976532 33444454443332221110
Q ss_pred CCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCCCCCCC
Q 035861 244 GLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVPLPKSK 318 (332)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~~~~ 318 (332)
.... .......+... ..+.............++.++.+||.+||..||++||++.|+|.||||.+.++...+
T Consensus 316 ~~~~--~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~p~f~~~~~~~~~ 387 (392)
T PHA03207 316 NGST--NLCKHFKQYAI-VLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSLPLFTKEPINLLN 387 (392)
T ss_pred ccch--hHHHHHHhhcc-cccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhCchhhccchhhhc
Confidence 0000 00000000000 000000000001112357788999999999999999999999999999987766544
No 140
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=1.3e-44 Score=310.99 Aligned_cols=261 Identities=26% Similarity=0.462 Sum_probs=211.8
Q ss_pred hhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCC
Q 035861 10 VFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDH 89 (332)
Q Consensus 10 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 89 (332)
.++|++++.||.|++|+||++.+..++..+++|++........ ..+..|++++++++|+|++++++.+.. +
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~--------~~~~~e~~~l~~l~h~~i~~~~~~~~~-~ 74 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEEL--------EDFMVEIDILSECKHPNIVGLYEAYFY-E 74 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHH--------HHHHHHHHHHHhCCCCceeEEEEEEec-C
Confidence 4689999999999999999999988899999999864322111 145689999999999999999999854 4
Q ss_pred CeEEEEcccccccHHH-HHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccC
Q 035861 90 DSVYMVMEYMEHDLKW-LMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYG 168 (332)
Q Consensus 90 ~~~~lv~e~~~~~l~~-~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~ 168 (332)
...++||||++++.+. .+......+++..+..++.|++.||+|||+.|++|+||+|+||+++.++.++|+|||.+....
T Consensus 75 ~~~~lv~e~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~ 154 (280)
T cd06611 75 NKLWILIEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLTLDGDVKLADFGVSAKNK 154 (280)
T ss_pred CeEEEEeeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEECCCCCEEEccCccchhhc
Confidence 7899999999985544 444445679999999999999999999999999999999999999999999999999887654
Q ss_pred CCCCCCccccccccccchhhhcC----CCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccC
Q 035861 169 SPLKPYTSLVVTLWYRAPELLLG----AKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPG 244 (332)
Q Consensus 169 ~~~~~~~~~~~~~~y~aPE~~~~----~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (332)
..........++..|+|||.+.. ...++.++|+||||+++|+|++|..||...........+.....
T Consensus 155 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~--------- 225 (280)
T cd06611 155 STLQKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVLLKILKSEP--------- 225 (280)
T ss_pred ccccccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHHHHHHhcCCC---------
Confidence 43333445568889999999752 24577899999999999999999999987765544433322110
Q ss_pred CCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCC
Q 035861 245 LSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVP 313 (332)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~ 313 (332)
.....+..++.++.++|.+||+.+|.+||+++++++||||.+..
T Consensus 226 -------------------------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~~ 269 (280)
T cd06611 226 -------------------------PTLDQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKHPFVSDQS 269 (280)
T ss_pred -------------------------CCcCCcccCCHHHHHHHHHHhccChhhCcCHHHHhcChhhcccc
Confidence 00111233688899999999999999999999999999999864
No 141
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=3.3e-44 Score=304.32 Aligned_cols=254 Identities=28% Similarity=0.457 Sum_probs=208.8
Q ss_pred cccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCCe
Q 035861 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHDS 91 (332)
Q Consensus 12 ~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 91 (332)
+|.+.+.||+|++|.||++.+..+++.|++|.+......... ...+..|+..++.++|||++++++.+.++ ..
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~------~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-~~ 73 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRRE------REEAIDEARVLAKLDSSYIIRYYESFLDK-GK 73 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHH------HHHHHHHHHHHHhcCCCCeehheeeeccC-CE
Confidence 588999999999999999999999999999998754332211 12466899999999999999999998554 78
Q ss_pred EEEEcccccc-cHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCC
Q 035861 92 VYMVMEYMEH-DLKWLMESM-KQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGS 169 (332)
Q Consensus 92 ~~lv~e~~~~-~l~~~~~~~-~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~ 169 (332)
.++|+||++| ++.+.+... ...+++..++.++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||.+.....
T Consensus 74 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~ 153 (256)
T cd08529 74 LNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSD 153 (256)
T ss_pred EEEEEEeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEeCCCCEEEcccccceeccC
Confidence 9999999986 454544443 46789999999999999999999999999999999999999999999999999887654
Q ss_pred CCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCCc
Q 035861 170 PLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELP 249 (332)
Q Consensus 170 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (332)
.........++..|+|||++.+ ..++.++|+||||+++|+|++|..||...+.......+......+
T Consensus 154 ~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~------------ 220 (256)
T cd08529 154 NTNFANTIVGTPYYLSPELCED-KPYNEKSDVWALGVVLYECCTGKHPFDANNQGALILKIIRGVFPP------------ 220 (256)
T ss_pred ccchhhccccCccccCHHHhcC-CCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCC------------
Confidence 4333345567889999999887 568899999999999999999999998877655544443221110
Q ss_pred cccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCC
Q 035861 250 GAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWF 309 (332)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f 309 (332)
....++.++.+++.+||+.+|++||++.++++|||+
T Consensus 221 ------------------------~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 256 (256)
T cd08529 221 ------------------------VSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRNPSL 256 (256)
T ss_pred ------------------------CccccCHHHHHHHHHHccCCcccCcCHHHHhhCCCC
Confidence 011268899999999999999999999999999995
No 142
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=100.00 E-value=1.3e-43 Score=312.31 Aligned_cols=295 Identities=43% Similarity=0.740 Sum_probs=226.8
Q ss_pred hhcccc-cccccccCcEEEEEEEECCCCcEEEEEEeecccCCccc------ccccCCCcchhHHHHHHhhCCCCCeeeee
Q 035861 10 VFEFEK-LNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKED------CLEYGFPISSLREINILLSFDHPSIVNVK 82 (332)
Q Consensus 10 ~~~y~~-~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~------~~~~~~~~~~~~e~~~l~~l~h~~i~~~~ 82 (332)
-++|.. .+.||.|++|+||+|.+..+++.||||++......... ..+......+.+|+.++++++|+||++++
T Consensus 7 ~~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~ 86 (335)
T PTZ00024 7 SERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLV 86 (335)
T ss_pred ccchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeee
Confidence 347765 46799999999999999989999999999765433211 01111122467899999999999999999
Q ss_pred eeEEcCCCeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecc
Q 035861 83 EVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFG 162 (332)
Q Consensus 83 ~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~ 162 (332)
+++..+ ...++|||+++|++.+.+.. ...+++..+..++.|++.||++||+.|++|+||+|+||+++.++.++|+|||
T Consensus 87 ~~~~~~-~~~~lv~e~~~~~l~~~l~~-~~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill~~~~~~kl~dfg 164 (335)
T PTZ00024 87 DVYVEG-DFINLVMDIMASDLKKVVDR-KIRLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFINSKGICKIADFG 164 (335)
T ss_pred EEEecC-CcEEEEEeccccCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEECCCCCEEECCcc
Confidence 998554 78999999999988777654 5679999999999999999999999999999999999999999999999999
Q ss_pred cccccCC--------------CCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHH
Q 035861 163 MSRQYGS--------------PLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQID 228 (332)
Q Consensus 163 ~~~~~~~--------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~ 228 (332)
.+..... .........++..|+|||.+.+...++.++|+||||+++|+|++|..||...+..+...
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~ 244 (335)
T PTZ00024 165 LARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEIDQLG 244 (335)
T ss_pred ceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 8876541 11122233467789999998775667999999999999999999999999988888888
Q ss_pred HHHHHcCCCCCCcccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCC
Q 035861 229 KIFKTLGTPTETIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYW 308 (332)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~ 308 (332)
.+....+.+....++.....+......... +.......+..+..+.++|.+||+.+|++||+++++|.|||
T Consensus 245 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~~~ 315 (335)
T PTZ00024 245 RIFELLGTPNEDNWPQAKKLPLYTEFTPRK---------PKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKHEY 315 (335)
T ss_pred HHHHHhCCCchhhCcchhhcccccccCcCC---------cccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhcCcc
Confidence 777776666655444332221111000000 00001112236788999999999999999999999999999
Q ss_pred CCCCCCC
Q 035861 309 FHEVPLP 315 (332)
Q Consensus 309 f~~~~~~ 315 (332)
|+...-.
T Consensus 316 ~~~~~~~ 322 (335)
T PTZ00024 316 FKSDPLP 322 (335)
T ss_pred cCCCCCC
Confidence 9987544
No 143
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=100.00 E-value=3.4e-44 Score=308.55 Aligned_cols=282 Identities=52% Similarity=0.962 Sum_probs=228.4
Q ss_pred ccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCCeE
Q 035861 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHDSV 92 (332)
Q Consensus 13 y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 92 (332)
|++.+.||+|++|.||+|+...+++.+++|++....... .....+..|+..+++++|+|++++++++.+. ...
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~------~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~ 73 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEE------GIPSTALREISLLKELKHPNIVKLLDVIHTE-RKL 73 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccc------cccHHHHHHHHHHHhcCCCCHHHHHhhhhcC-Cce
Confidence 677899999999999999999999999999998654211 1122456899999999999999999998544 789
Q ss_pred EEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCCCCC
Q 035861 93 YMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLK 172 (332)
Q Consensus 93 ~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~~~~ 172 (332)
++|+|++++++.+.+......+++..+..++.|++.||++||+.|++|+||+|+||+++.++.++|+|||.+........
T Consensus 74 ~~v~e~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~ 153 (282)
T cd07829 74 YLVFEYCDMDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILINRDGVLKLADFGLARAFGIPLR 153 (282)
T ss_pred EEEecCcCcCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEEcCCCCEEEecCCcccccCCCcc
Confidence 99999999988877776556899999999999999999999999999999999999999999999999999887654433
Q ss_pred CCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCCcccc
Q 035861 173 PYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGAK 252 (332)
Q Consensus 173 ~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (332)
......++..|+|||.+.+...++.++|+||||+++|++++|..||...+..+...++......+....++.+.......
T Consensus 154 ~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (282)
T cd07829 154 TYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYK 233 (282)
T ss_pred ccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhccccccc
Confidence 44445567789999998875578999999999999999999999999988888888888777766666665554443222
Q ss_pred ccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCC
Q 035861 253 ANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWF 309 (332)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f 309 (332)
............. ..+.++..+.++|.+||..||++||++++++.||||
T Consensus 234 ~~~~~~~~~~~~~--------~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~p~~ 282 (282)
T cd07829 234 PTFPKFPPKDLEK--------VLPRLDPEGIDLLSKMLQYNPAKRISAKEALKHPYF 282 (282)
T ss_pred ccccccCccchHH--------hcccccHHHHHHHHHhhccCcccCCCHHHHhhCcCC
Confidence 2211111111111 122357889999999999999999999999999998
No 144
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=3.7e-44 Score=310.34 Aligned_cols=259 Identities=27% Similarity=0.443 Sum_probs=212.4
Q ss_pred hhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCC
Q 035861 10 VFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDH 89 (332)
Q Consensus 10 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 89 (332)
..+|++++.||.|++|+||++.+..+++.|++|.+....... ...+.+|+..++.++|+|++.+++.+.. .
T Consensus 18 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~--------~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~ 88 (296)
T cd06655 18 KKKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPK--------KELIINEILVMKELKNPNIVNFLDSFLV-G 88 (296)
T ss_pred cceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCch--------HHHHHHHHHHHHhcCCCceeeeeeeEec-C
Confidence 357999999999999999999999999999999986543221 1245689999999999999999999854 4
Q ss_pred CeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCC
Q 035861 90 DSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGS 169 (332)
Q Consensus 90 ~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~ 169 (332)
...++|+||++|+.+..... ...+++..+..++.|++.||++||+.|++|+||+|+||+++.++.++|+|||.+.....
T Consensus 89 ~~~~lv~e~~~~~~L~~~~~-~~~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~ 167 (296)
T cd06655 89 DELFVVMEYLAGGSLTDVVT-ETCMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITP 167 (296)
T ss_pred ceEEEEEEecCCCcHHHHHH-hcCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccchhccc
Confidence 78999999999876665554 45689999999999999999999999999999999999999999999999998876543
Q ss_pred CCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCCc
Q 035861 170 PLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELP 249 (332)
Q Consensus 170 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (332)
.........++..|+|||.+.+ ..++.++|+||||+++|++++|..||...+.......+......
T Consensus 168 ~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~~~~~~~------------- 233 (296)
T cd06655 168 EQSKRSTMVGTPYWMAPEVVTR-KAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTP------------- 233 (296)
T ss_pred ccccCCCcCCCccccCcchhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCc-------------
Confidence 3333334567889999999876 66889999999999999999999999887665444333221100
Q ss_pred cccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCC
Q 035861 250 GAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVP 313 (332)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~ 313 (332)
....+..+++.+.+||.+||..||++||++.+++.||||....
T Consensus 234 ---------------------~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~~~~~~~~~ 276 (296)
T cd06655 234 ---------------------ELQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQHPFLKLAK 276 (296)
T ss_pred ---------------------ccCCcccCCHHHHHHHHHHhhcChhhCCCHHHHhhChHhhhcc
Confidence 0111233788899999999999999999999999999998754
No 145
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=4.4e-44 Score=305.53 Aligned_cols=259 Identities=28% Similarity=0.442 Sum_probs=206.7
Q ss_pred chhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcC
Q 035861 9 SVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDD 88 (332)
Q Consensus 9 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 88 (332)
..++|++.+.||.|++|.||+|.+..+++.|++|++........ ..+.+|+..++.++||||+++++.+...
T Consensus 7 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~--------~~~~~e~~~~~~l~h~~ii~~~~~~~~~ 78 (267)
T cd06645 7 PQEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDF--------AVVQQEIIMMKDCKHSNIVAYFGSYLRR 78 (267)
T ss_pred cHHHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHH--------HHHHHHHHHHHhCCCCCeeeEEEEEEeC
Confidence 34699999999999999999999999999999999875432111 1345799999999999999999998554
Q ss_pred CCeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccC
Q 035861 89 HDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYG 168 (332)
Q Consensus 89 ~~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~ 168 (332)
...++++||++++.+..+....+.+++..++.++.|++.||+|||+.|++|+||+|+||+++.++.++|+|||.+....
T Consensus 79 -~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~ 157 (267)
T cd06645 79 -DKLWICMEFCGGGSLQDIYHVTGPLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLTDNGHVKLADFGVSAQIT 157 (267)
T ss_pred -CEEEEEEeccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECcceeeeEcc
Confidence 7899999999976555555557789999999999999999999999999999999999999999999999999987654
Q ss_pred CCCCCCccccccccccchhhhc--CCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCC
Q 035861 169 SPLKPYTSLVVTLWYRAPELLL--GAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLS 246 (332)
Q Consensus 169 ~~~~~~~~~~~~~~y~aPE~~~--~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (332)
..........|+..|+|||.+. ....++.++|+||||+++|++++|..||..................++
T Consensus 158 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~-------- 229 (267)
T cd06645 158 ATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTKSNFQPP-------- 229 (267)
T ss_pred CcccccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhhhccCCCCC--------
Confidence 4333334557889999999874 224578899999999999999999999876544332222211100000
Q ss_pred CCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCC
Q 035861 247 ELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYW 308 (332)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~ 308 (332)
.......++..+.++|.+||+.+|++||++++|++|||
T Consensus 230 ------------------------~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~~~~ 267 (267)
T cd06645 230 ------------------------KLKDKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQHPF 267 (267)
T ss_pred ------------------------cccccCCCCHHHHHHHHHHccCCchhCcCHHHHhcCCC
Confidence 00011126778999999999999999999999999998
No 146
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=5.4e-44 Score=309.35 Aligned_cols=262 Identities=27% Similarity=0.452 Sum_probs=211.1
Q ss_pred cchhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEc
Q 035861 8 RSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMD 87 (332)
Q Consensus 8 ~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~ 87 (332)
....+|++++.||+|++|.||+|++..++..+++|.+........ ..+.+|+.+++.+.|+|++++++.+..
T Consensus 17 ~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~--------~~~~~e~~~l~~~~h~~v~~~~~~~~~ 88 (296)
T cd06654 17 DPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKK--------ELIINEILVMRENKNPNIVNYLDSYLV 88 (296)
T ss_pred CcccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchH--------HHHHHHHHHHHhCCCCCEeeEEEEEEe
Confidence 345699999999999999999999998999999999875433221 145689999999999999999998855
Q ss_pred CCCeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeeccccccc
Q 035861 88 DHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQY 167 (332)
Q Consensus 88 ~~~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~ 167 (332)
+ ...|+|+||++|+.+..+.. ...+++..+..++.|++.||+|||+.|++|+||+|+||+++.++.++|+|||.+...
T Consensus 89 ~-~~~~lv~e~~~~~~L~~~~~-~~~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~ 166 (296)
T cd06654 89 G-DELWVVMEYLAGGSLTDVVT-ETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQI 166 (296)
T ss_pred C-CEEEEeecccCCCCHHHHHH-hcCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEECccccchhc
Confidence 4 78999999998755544443 456899999999999999999999999999999999999999999999999988765
Q ss_pred CCCCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCC
Q 035861 168 GSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSE 247 (332)
Q Consensus 168 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (332)
...........++..|+|||.+.+ ..++.++|+||||+++|+|++|..||................ .+
T Consensus 167 ~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~~~~~~-~~---------- 234 (296)
T cd06654 167 TPEQSKRSTMVGTPYWMAPEVVTR-KAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNG-TP---------- 234 (296)
T ss_pred cccccccCcccCCccccCHHHHcC-CCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHHHhcCC-CC----------
Confidence 433333344568889999999876 667899999999999999999999997765433322221110 00
Q ss_pred CccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCCC
Q 035861 248 LPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVPL 314 (332)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~ 314 (332)
....+..++..+.+||.+||..+|++||+++++++||||.....
T Consensus 235 -----------------------~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~~~~~~~~~ 278 (296)
T cd06654 235 -----------------------ELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKIAKP 278 (296)
T ss_pred -----------------------CCCCccccCHHHHHHHHHHCcCCcccCcCHHHHhhChhhhccCC
Confidence 01112236788999999999999999999999999999987543
No 147
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=2.2e-44 Score=317.35 Aligned_cols=294 Identities=40% Similarity=0.658 Sum_probs=224.8
Q ss_pred hhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCC
Q 035861 10 VFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDH 89 (332)
Q Consensus 10 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 89 (332)
..+|.+.+.||.|++|+||++++..+++.||||.+......... ...+..|+.+++.++|+||+++++++....
T Consensus 4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~------~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~ 77 (337)
T cd07858 4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRID------AKRTLREIKLLRHLDHENVIAIKDIMPPPH 77 (337)
T ss_pred ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccch------hHHHHHHHHHHHhcCCCCccchHHheeccc
Confidence 35899999999999999999999999999999998643211111 124568999999999999999999875432
Q ss_pred ----CeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeeccccc
Q 035861 90 ----DSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSR 165 (332)
Q Consensus 90 ----~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~ 165 (332)
...++++||+++++.+.+.. .+.+++..+..++.|++.||.|||++|++|+||+|+||+++.++.++|+|||.+.
T Consensus 78 ~~~~~~~~lv~e~~~~~L~~~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~ 156 (337)
T cd07858 78 REAFNDVYIVYELMDTDLHQIIRS-SQTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLAR 156 (337)
T ss_pred ccccCcEEEEEeCCCCCHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECcCcccc
Confidence 35799999999888776654 5789999999999999999999999999999999999999999999999999987
Q ss_pred ccCCCCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCC
Q 035861 166 QYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGL 245 (332)
Q Consensus 166 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (332)
.............++..|+|||.+.....++.++|+||||+++|+|++|..||...+.......+....+.+....+..+
T Consensus 157 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (337)
T cd07858 157 TTSEKGDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFI 236 (337)
T ss_pred ccCCCcccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhc
Confidence 65433233344567888999999876556899999999999999999999999887766666666665554444332211
Q ss_pred CCCccccccccCCchhhhhhhCCCC-ccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCCCCCC
Q 035861 246 SELPGAKANFAKQPYNLLRKRFPAA-SFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVPLPKS 317 (332)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~~~ 317 (332)
....... +.......+.. .....+.++..+++||.+||+.+|++||+++++++||||..++.+..
T Consensus 237 ~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~~~~~~ 302 (337)
T cd07858 237 RNEKARR-------YIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASLHDPSD 302 (337)
T ss_pred CchhhhH-------HHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhhcCccc
Confidence 1100000 00000000000 01123457899999999999999999999999999999999876654
No 148
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=3.6e-44 Score=308.52 Aligned_cols=260 Identities=25% Similarity=0.455 Sum_probs=209.9
Q ss_pred cccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCCe
Q 035861 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHDS 91 (332)
Q Consensus 12 ~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 91 (332)
-|++.+.||.|++|.||++.+..++..+++|.+....... ...+.+|+..++.++|+|++++++.+... ..
T Consensus 6 ~~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~--------~~~~~~e~~~l~~l~h~~ii~~~~~~~~~-~~ 76 (282)
T cd06643 6 FWEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEE--------LEDYMVEIDILASCDHPNIVKLLDAFYYE-NN 76 (282)
T ss_pred HHHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHH--------HHHHHHHHHHHHHCCCCCeeeEEEEEeeC-CE
Confidence 3689999999999999999999999999999986432111 11456799999999999999999998554 78
Q ss_pred EEEEcccccccHHHHH-HhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCCC
Q 035861 92 VYMVMEYMEHDLKWLM-ESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSP 170 (332)
Q Consensus 92 ~~lv~e~~~~~l~~~~-~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~~ 170 (332)
.++|+||++++.+... .....++++..+..++.|++.||+|||+.|++|+||+|+||+++.++.++|+|||.+......
T Consensus 77 ~~~v~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~ 156 (282)
T cd06643 77 LWILIEFCAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRT 156 (282)
T ss_pred EEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEccCCCEEEcccccccccccc
Confidence 9999999997665544 444567999999999999999999999999999999999999999999999999998765433
Q ss_pred CCCCccccccccccchhhhc----CCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCC
Q 035861 171 LKPYTSLVVTLWYRAPELLL----GAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLS 246 (332)
Q Consensus 171 ~~~~~~~~~~~~y~aPE~~~----~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (332)
........++..|+|||.+. ....++.++|+||+|+++|+|++|..||...+.......+.......
T Consensus 157 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~--------- 227 (282)
T cd06643 157 IQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPT--------- 227 (282)
T ss_pred ccccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHHHHHHhhcCCCC---------
Confidence 33334456788999999984 22457889999999999999999999998776555444443221100
Q ss_pred CCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCCC
Q 035861 247 ELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVPL 314 (332)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~ 314 (332)
...+..++..+.+||.+||+.||.+||+++++++||||.....
T Consensus 228 -------------------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~ 270 (282)
T cd06643 228 -------------------------LAQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQHPFVTVNSN 270 (282)
T ss_pred -------------------------CCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCCCEeccCC
Confidence 0112236888999999999999999999999999999998544
No 149
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.2e-45 Score=314.14 Aligned_cols=265 Identities=27% Similarity=0.441 Sum_probs=234.2
Q ss_pred hhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCC
Q 035861 10 VFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDH 89 (332)
Q Consensus 10 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 89 (332)
-.=|.+.+.||+|-|..|-++++-.||+.||||++.+........ ..+++|++.|+..+||||+++|+++ +.+
T Consensus 17 AGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st------~hlfqEVRCMKLVQHpNiVRLYEVi-DTQ 89 (864)
T KOG4717|consen 17 AGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLST------GHLFQEVRCMKLVQHPNIVRLYEVI-DTQ 89 (864)
T ss_pred eeeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhh------hHHHHHHHHHHHhcCcCeeeeeehh-ccc
Confidence 346899999999999999999999999999999998765433221 2567999999999999999999998 666
Q ss_pred CeEEEEcccccc-cHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEc-CCCcEEEeeccccccc
Q 035861 90 DSVYMVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLN-NQGVLKICDFGMSRQY 167 (332)
Q Consensus 90 ~~~~lv~e~~~~-~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~-~~~~~~l~df~~~~~~ 167 (332)
..+|+|+|.=+| ++.+.+.+....+.++.+.+++.||+.|+.|+|+..++|+||||+|+.+. +-|-|||+|||++..+
T Consensus 90 TKlyLiLELGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf 169 (864)
T KOG4717|consen 90 TKLYLILELGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKF 169 (864)
T ss_pred ceEEEEEEecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEeeecCceEeeeccccccC
Confidence 889999999875 88888888888999999999999999999999999999999999999775 5689999999999877
Q ss_pred CCCCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCC
Q 035861 168 GSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSE 247 (332)
Q Consensus 168 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (332)
. +.....+.+|+..|.|||++.+..+..++.||||||+++|.+.+|..||...++.+++..|+.+....
T Consensus 170 ~-PG~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLTmImDCKYtv---------- 238 (864)
T KOG4717|consen 170 Q-PGKKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLTMIMDCKYTV---------- 238 (864)
T ss_pred C-CcchhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhhhhhhhcccccC----------
Confidence 3 45667788999999999999998888999999999999999999999999999999998888763322
Q ss_pred CccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCCCCCCCC
Q 035861 248 LPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVPLPKSKD 319 (332)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~~~~~ 319 (332)
+..++.+.++||..||..||.+|.++++|..|+|++-+..+.+-.
T Consensus 239 ---------------------------PshvS~eCrdLI~sMLvRdPkkRAslEeI~s~~Wlq~~D~~~sT~ 283 (864)
T KOG4717|consen 239 ---------------------------PSHVSKECRDLIQSMLVRDPKKRASLEEIVSTSWLQAGDRGLSTA 283 (864)
T ss_pred ---------------------------chhhhHHHHHHHHHHHhcCchhhccHHHHhccccccCCCCCcccc
Confidence 233799999999999999999999999999999999988776644
No 150
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=2.9e-44 Score=306.59 Aligned_cols=259 Identities=25% Similarity=0.426 Sum_probs=205.4
Q ss_pred chhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcC
Q 035861 9 SVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDD 88 (332)
Q Consensus 9 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 88 (332)
..++|++.+.||+|++|.||+|++..+++.+++|++........ ..+.+|+..+++++||||+++++.+...
T Consensus 7 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~--------~~~~~e~~~l~~~~h~~ii~~~~~~~~~ 78 (267)
T cd06646 7 PQHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDF--------SLIQQEIFMVKECKHCNIVAYFGSYLSR 78 (267)
T ss_pred chhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchH--------HHHHHHHHHHHhcCCCCeeeeeEEEEeC
Confidence 34589999999999999999999999999999999975432111 1356899999999999999999998554
Q ss_pred CCeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccC
Q 035861 89 HDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYG 168 (332)
Q Consensus 89 ~~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~ 168 (332)
...++|+||++++.+..+....+.+++..+..++.|++.||.|||+.|++|+||+|.||+++.++.++|+|||.+....
T Consensus 79 -~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~ 157 (267)
T cd06646 79 -EKLWICMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLTDNGDVKLADFGVAAKIT 157 (267)
T ss_pred -CEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEECcCccceeec
Confidence 7889999999976555544446789999999999999999999999999999999999999999999999999988664
Q ss_pred CCCCCCccccccccccchhhhcC--CCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCC
Q 035861 169 SPLKPYTSLVVTLWYRAPELLLG--AKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLS 246 (332)
Q Consensus 169 ~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (332)
..........++..|+|||.+.. ...++.++|+||+|+++|+|++|..||...........+......+
T Consensus 158 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~--------- 228 (267)
T cd06646 158 ATIAKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSNFQP--------- 228 (267)
T ss_pred ccccccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhheeeecCCCCC---------
Confidence 43333344567889999998742 3457889999999999999999999996554332211111100000
Q ss_pred CCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCC
Q 035861 247 ELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYW 308 (332)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~ 308 (332)
........++..+.+||.+||+.+|++||+++++|+|+|
T Consensus 229 -----------------------~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l~ 267 (267)
T cd06646 229 -----------------------PKLKDKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHLF 267 (267)
T ss_pred -----------------------CCCccccccCHHHHHHHHHHhhCChhhCcCHHHHhcCCC
Confidence 000011236789999999999999999999999999998
No 151
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=7.4e-44 Score=307.42 Aligned_cols=285 Identities=38% Similarity=0.679 Sum_probs=219.5
Q ss_pred hcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCC
Q 035861 11 FEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHD 90 (332)
Q Consensus 11 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 90 (332)
++|++.+.||+|++|.||+|.+..+++.|++|++....... .....+.+|+..++.++|+||+++++.+.. ..
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~------~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~ 73 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDE------DVKKTALREVKVLRQLRHENIVNLKEAFRR-KG 73 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccc------cchhHHHHHHHHHHhcCCCCeeehhheEEE-CC
Confidence 37999999999999999999999999999999987543322 112356789999999999999999999955 47
Q ss_pred eEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCCC
Q 035861 91 SVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSP 170 (332)
Q Consensus 91 ~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~~ 170 (332)
..++++||++++++..+......+++..++.++.|++.||++||+.|++|+||+|+||+++.++.++|+|||.+......
T Consensus 74 ~~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~ 153 (288)
T cd07833 74 RLYLVFEYVERTLLELLEASPGGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVSESGVLKLCDFGFARALRAR 153 (288)
T ss_pred EEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEEeeecccccCCC
Confidence 89999999999988877776777999999999999999999999999999999999999999999999999998876443
Q ss_pred CC-CCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCCc
Q 035861 171 LK-PYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELP 249 (332)
Q Consensus 171 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (332)
.. ......++..|+|||.+.+...++.++|+||||+++|++++|..||...+..+....+....+..+...........
T Consensus 154 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (288)
T cd07833 154 PASPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNP 233 (288)
T ss_pred ccccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCc
Confidence 32 33445678889999999875478999999999999999999999998877666555554433322222111111000
Q ss_pred cccc-cc-cCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCC
Q 035861 250 GAKA-NF-AKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWF 309 (332)
Q Consensus 250 ~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f 309 (332)
.... .. ........... ....++.++++||.+||..+|++||+++++++||||
T Consensus 234 ~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~f 288 (288)
T cd07833 234 RFAGVAFPEPSQPESLERR-------YPGKVSSPALDFLKACLRMDPKERLTCDELLQHPYF 288 (288)
T ss_pred cccccccCCCCCcHHHHHh-------cCCccchHHHHHHHHHhccCchhcccHHHHhcCCCC
Confidence 0000 00 00000000000 122358899999999999999999999999999998
No 152
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=3.8e-44 Score=308.71 Aligned_cols=274 Identities=24% Similarity=0.409 Sum_probs=214.8
Q ss_pred cccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCCe
Q 035861 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHDS 91 (332)
Q Consensus 12 ~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 91 (332)
.|+..+.||.|+||+||++.+..+++.+|+|.+.......... ...+.+|+.+++.++|++++.+.+.+..+ ..
T Consensus 1 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~-----~~~~~~E~~il~~l~~~~i~~~~~~~~~~-~~ 74 (285)
T cd05632 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKG-----ESMALNEKQILEKVNSQFVVNLAYAYETK-DA 74 (285)
T ss_pred CceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhH-----HHHHHHHHHHHHHcCCcCceeEEEEEecC-CE
Confidence 3778899999999999999999999999999987543222111 11346799999999999999999888544 78
Q ss_pred EEEEcccccccHH-HHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCC
Q 035861 92 VYMVMEYMEHDLK-WLMESM-KQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGS 169 (332)
Q Consensus 92 ~~lv~e~~~~~l~-~~~~~~-~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~ 169 (332)
.++++||++++.+ +.+... ...+++..+..++.|++.||.|||+.||+|+||+|+||+++.++.++|+|||.+.....
T Consensus 75 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~ 154 (285)
T cd05632 75 LCLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLDDYGHIRISDLGLAVKIPE 154 (285)
T ss_pred EEEEEEeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEECCCCCEEEecCCcceecCC
Confidence 9999999997544 344332 34699999999999999999999999999999999999999999999999998876432
Q ss_pred CCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCCc
Q 035861 170 PLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELP 249 (332)
Q Consensus 170 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (332)
. .......|+..|+|||.+.+ ..++.++|+||||+++|++++|..||...........+.........
T Consensus 155 ~-~~~~~~~g~~~~~aPE~~~~-~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~---------- 222 (285)
T cd05632 155 G-ESIRGRVGTVGYMAPEVLNN-QRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLETEE---------- 222 (285)
T ss_pred C-CcccCCCCCcCccChHHhcC-CCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhcccc----------
Confidence 2 22234578999999999976 66899999999999999999999999877655443333322111100
Q ss_pred cccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCC-----HHHHhcCCCCCCCCCCCCC--CCCC
Q 035861 250 GAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRIT-----VDDALNHYWFHEVPLPKSK--DFMP 322 (332)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps-----~~ell~hp~f~~~~~~~~~--~~~~ 322 (332)
...+.++.++.+|+.+||+.||++||+ ++++++|+||.+..+.... ...+
T Consensus 223 -----------------------~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 279 (285)
T cd05632 223 -----------------------VYSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRHPFFRNMNFKRLEAGMLDP 279 (285)
T ss_pred -----------------------ccCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcChhhhcCCHHHHhcCcCCC
Confidence 012236788999999999999999999 8999999999998766542 2334
Q ss_pred CCCC
Q 035861 323 TFPP 326 (332)
Q Consensus 323 ~~~~ 326 (332)
+|-|
T Consensus 280 ~~~~ 283 (285)
T cd05632 280 PFVP 283 (285)
T ss_pred CCCC
Confidence 4444
No 153
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=9e-44 Score=306.63 Aligned_cols=284 Identities=53% Similarity=0.953 Sum_probs=225.2
Q ss_pred ccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcC-CCe
Q 035861 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDD-HDS 91 (332)
Q Consensus 13 y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-~~~ 91 (332)
|++.+.||.|++|.||+|.+..+++.+++|.+....... .....+.+|+..++.++|+|++++++.+... ...
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~------~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 74 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKE------GFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGS 74 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccc------cchHHHHHHHHHHHhccCCCeeeheeeEecCCCCc
Confidence 678999999999999999999899999999998654111 1112467899999999999999999998554 378
Q ss_pred EEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCCCC
Q 035861 92 VYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPL 171 (332)
Q Consensus 92 ~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~~~ 171 (332)
.++|+||+++++...+......+++..++.++.||+.||++||+.|++|+||+|+||+++.++.++|+|||.+.......
T Consensus 75 ~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~ 154 (287)
T cd07840 75 IYMVFEYMDHDLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILINNDGVLKLADFGLARPYTKRN 154 (287)
T ss_pred EEEEeccccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEcCCCCEEEccccceeeccCCC
Confidence 99999999998877776655689999999999999999999999999999999999999999999999999988664332
Q ss_pred C-CCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCCcc
Q 035861 172 K-PYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPG 250 (332)
Q Consensus 172 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (332)
. ......++..|+|||.+.+...++.++|+||||+++|++++|..||...+.......+......+....++.+..+..
T Consensus 155 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (287)
T cd07840 155 SADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPW 234 (287)
T ss_pred cccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccccchh
Confidence 1 223345678899999887656689999999999999999999999999888888888877766666665555444311
Q ss_pred ccccc-cCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCC
Q 035861 251 AKANF-AKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWF 309 (332)
Q Consensus 251 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f 309 (332)
..... ............. ..++..+.+++.+||+.+|++||+++++++||||
T Consensus 235 ~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~~~~ 287 (287)
T cd07840 235 FENLKPKKPYKRRLREFFK-------HLIDPSALDLLDKLLTLDPKKRISADQALQHEYF 287 (287)
T ss_pred hhhccccccchhHHHHHhc-------ccCCHHHHHHHHHHcCCChhhCcCHHHHhhCcCC
Confidence 11100 0111111111111 1148899999999999999999999999999998
No 154
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=3e-44 Score=329.77 Aligned_cols=262 Identities=28% Similarity=0.396 Sum_probs=211.4
Q ss_pred chhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcC
Q 035861 9 SVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDD 88 (332)
Q Consensus 9 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 88 (332)
...+|++.+.||+|+||+||++.+..+++.||||++......... ...+.+|+..+..++|+|++.++..+...
T Consensus 30 ~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~------~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~ 103 (496)
T PTZ00283 30 QAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEAD------KNRAQAEVCCLLNCDFFSIVKCHEDFAKK 103 (496)
T ss_pred cCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHH------HHHHHHHHHHHhcCCCCcEEEeecceecc
Confidence 346999999999999999999999999999999999765332211 11356889999999999999998876432
Q ss_pred C-------CeEEEEcccccc-cHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEE
Q 035861 89 H-------DSVYMVMEYMEH-DLKWLMES---MKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLK 157 (332)
Q Consensus 89 ~-------~~~~lv~e~~~~-~l~~~~~~---~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~ 157 (332)
. ..+++||||+++ ++.+.+.. ....+++..+..++.|++.||+|||+.||+|+||||+||+++.++.++
T Consensus 104 ~~~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~~~~~vk 183 (496)
T PTZ00283 104 DPRNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLCSNGLVK 183 (496)
T ss_pred cccCcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEeCCCCEE
Confidence 2 147899999986 55554433 235689999999999999999999999999999999999999999999
Q ss_pred EeecccccccCCC--CCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcC
Q 035861 158 ICDFGMSRQYGSP--LKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLG 235 (332)
Q Consensus 158 l~df~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~ 235 (332)
|+|||++...... ........|++.|+|||.+.+ ..++.++||||||+++|+|++|..||...+..+....+.....
T Consensus 184 L~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~-~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~~~~~~~~~~ 262 (496)
T PTZ00283 184 LGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRR-KPYSKKADMFSLGVLLYELLTLKRPFDGENMEEVMHKTLAGRY 262 (496)
T ss_pred EEecccCeeccccccccccccccCCcceeCHHHhCC-CCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCC
Confidence 9999998765322 122334578999999999987 6789999999999999999999999988776655554433211
Q ss_pred CCCCCcccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCC
Q 035861 236 TPTETIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVP 313 (332)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~ 313 (332)
. ..++.+++++.+|+.+||+.||.+||++.++++|||++...
T Consensus 263 ~------------------------------------~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~p~~~~~~ 304 (496)
T PTZ00283 263 D------------------------------------PLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNMPICKLFI 304 (496)
T ss_pred C------------------------------------CCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhCHHHHHhh
Confidence 0 11233788999999999999999999999999999987643
No 155
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=4.1e-44 Score=310.25 Aligned_cols=264 Identities=27% Similarity=0.445 Sum_probs=211.8
Q ss_pred cchhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEc
Q 035861 8 RSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMD 87 (332)
Q Consensus 8 ~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~ 87 (332)
....+|++++.||.|++|.||++.+..+++.||+|.+........ ..+.+|+.+++.++|+|++++++.+..
T Consensus 16 ~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~--------~~~~~e~~~l~~~~h~~i~~~~~~~~~ 87 (297)
T cd06656 16 DPKKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKK--------ELIINEILVMRENKNPNIVNYLDSYLV 87 (297)
T ss_pred ChhhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchH--------HHHHHHHHHHHhCCCCCEeeEEEEEec
Confidence 344799999999999999999999998999999999865432221 245689999999999999999999854
Q ss_pred CCCeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeeccccccc
Q 035861 88 DHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQY 167 (332)
Q Consensus 88 ~~~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~ 167 (332)
+ ...++||||++|+.+..... ...+++..+..++.|++.||.+||+.|++|+||+|+||+++.++.++|+|||.+...
T Consensus 88 ~-~~~~lv~e~~~~~~L~~~~~-~~~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~ 165 (297)
T cd06656 88 G-DELWVVMEYLAGGSLTDVVT-ETCMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQI 165 (297)
T ss_pred C-CEEEEeecccCCCCHHHHHH-hCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEECcCccceEc
Confidence 4 78999999998765555544 456899999999999999999999999999999999999999999999999998765
Q ss_pred CCCCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCC
Q 035861 168 GSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSE 247 (332)
Q Consensus 168 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (332)
...........++..|+|||.+.+ ..++.++|+||||+++|++++|..||...+.......+... +.
T Consensus 166 ~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~~~~-~~----------- 232 (297)
T cd06656 166 TPEQSKRSTMVGTPYWMAPEVVTR-KAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATN-GT----------- 232 (297)
T ss_pred cCCccCcCcccCCccccCHHHHcC-CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeeeccC-CC-----------
Confidence 443333344567889999999877 66889999999999999999999999765432221111100 00
Q ss_pred CccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCCCCC
Q 035861 248 LPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVPLPK 316 (332)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~~ 316 (332)
.....+..++..+++|+.+||..+|++||+++++++||||.......
T Consensus 233 ----------------------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~~~ 279 (297)
T cd06656 233 ----------------------PELQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQHPFLKLAKPLS 279 (297)
T ss_pred ----------------------CCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCchhccccccc
Confidence 00111223678899999999999999999999999999998765443
No 156
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=6.4e-44 Score=310.30 Aligned_cols=276 Identities=27% Similarity=0.369 Sum_probs=218.2
Q ss_pred hcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCC
Q 035861 11 FEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHD 90 (332)
Q Consensus 11 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 90 (332)
++|++++.||.|++|.||++.+..+++.|++|.+.......... ...+.+|+.+++.++||||+++++.+. .+.
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~-----~~~~~~e~~~l~~~~~~~i~~~~~~~~-~~~ 74 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQ-----IQQVFVERDILTFAENPFVVSMFCSFE-TKR 74 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHH-----HHHHHHHHHHHHhCCCCCeeeeEEEEe-cCC
Confidence 47999999999999999999999999999999987543211111 124568999999999999999999884 447
Q ss_pred eEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCCC
Q 035861 91 SVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSP 170 (332)
Q Consensus 91 ~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~~ 170 (332)
..++|||+++|+.+.......+.+++..+..++.|++.||+|||++|++|+||+|.||+++.++.++|+|||.+......
T Consensus 75 ~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~ 154 (305)
T cd05609 75 HLCMVMEYVEGGDCATLLKNIGALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMS 154 (305)
T ss_pred EEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEECCCCCEEEeeCCCccccCcC
Confidence 89999999998655555555678999999999999999999999999999999999999999999999999987632100
Q ss_pred C---------------CCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcC
Q 035861 171 L---------------KPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLG 235 (332)
Q Consensus 171 ~---------------~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~ 235 (332)
. .......++..|+|||.+.. ..++.++|+||||+++|++++|..||.+....+..........
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~~~~~~~~~ 233 (305)
T cd05609 155 LTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILR-QGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDI 233 (305)
T ss_pred ccccccccccccchhhccccCCccCccccCchhccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccc
Confidence 0 01112356778999999876 6689999999999999999999999987766555544433211
Q ss_pred CCCCCcccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCC---HHHHhcCCCCCCC
Q 035861 236 TPTETIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRIT---VDDALNHYWFHEV 312 (332)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps---~~ell~hp~f~~~ 312 (332)
..+. ....++..+.++|.+||+.||++||+ +.++|+||||...
T Consensus 234 ~~~~----------------------------------~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~~~~~~~ 279 (305)
T cd05609 234 EWPE----------------------------------GDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQHRFFLGL 279 (305)
T ss_pred CCCC----------------------------------ccccCCHHHHHHHHHHhccChhhccCccCHHHHHhCccccCC
Confidence 1110 01136888999999999999999997 7999999999998
Q ss_pred CCCCCCCCCCCCCCc
Q 035861 313 PLPKSKDFMPTFPPQ 327 (332)
Q Consensus 313 ~~~~~~~~~~~~~~~ 327 (332)
.+...-.....+.|+
T Consensus 280 ~~~~~~~~~~~~~~~ 294 (305)
T cd05609 280 DWNGLLRQKAEFIPQ 294 (305)
T ss_pred CHHHHhhcCCCCCCC
Confidence 877765555555444
No 157
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=2.7e-44 Score=314.23 Aligned_cols=288 Identities=45% Similarity=0.832 Sum_probs=214.0
Q ss_pred cccccccccccCcEEEEEEEECC--CCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcC-
Q 035861 12 EFEKLNKISEGTYGIVYRARDKK--SGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDD- 88 (332)
Q Consensus 12 ~y~~~~~lg~g~~g~v~~~~~~~--~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~- 88 (332)
+|++.+.||+|++|.||+|.+.. ++..||+|.+........ .....+.+|+.+++.++||||+++++.+...
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~-----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 75 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYT-----GISQSACREIALLRELKHENVVSLVEVFLEHA 75 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEecccccccc-----CccHHHHHHHHHHHhcCCCCccceEEEEeCCC
Confidence 58899999999999999999987 899999999986432111 1122456899999999999999999998544
Q ss_pred CCeEEEEcccccccHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcC----CCcEEEee
Q 035861 89 HDSVYMVMEYMEHDLKWLMESM----KQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNN----QGVLKICD 160 (332)
Q Consensus 89 ~~~~~lv~e~~~~~l~~~~~~~----~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~----~~~~~l~d 160 (332)
....++|+|++++++.+.+... ...+++..++.++.|++.||+|||+.|++|+||+|+||+++. ++.++|+|
T Consensus 76 ~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl~D 155 (316)
T cd07842 76 DKSVYLLFDYAEHDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKIGD 155 (316)
T ss_pred CceEEEEEeCCCcCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCCccceEEECC
Confidence 2679999999998887665432 236899999999999999999999999999999999999999 89999999
Q ss_pred cccccccCCCCC---CCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChH---------HHHH
Q 035861 161 FGMSRQYGSPLK---PYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEV---------DQID 228 (332)
Q Consensus 161 f~~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~---------~~~~ 228 (332)
||.+........ ......++..|+|||.+.+...++.++|+||||+++|+|++|..||...... ....
T Consensus 156 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (316)
T cd07842 156 LGLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLE 235 (316)
T ss_pred CccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHH
Confidence 999876543322 2234467888999999877567899999999999999999999999765432 2334
Q ss_pred HHHHHcCCCCCCcccCCCCCcccccc---ccCCch--hhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHH
Q 035861 229 KIFKTLGTPTETIWPGLSELPGAKAN---FAKQPY--NLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDA 303 (332)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~el 303 (332)
.+......+....+..+...+..... ...... ...... .......+..+.+++.+||+.||++|||+.|+
T Consensus 236 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~ei 310 (316)
T cd07842 236 RIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKW-----MEKHKKPDSQGFDLLRKLLEYDPTKRITAEEA 310 (316)
T ss_pred HHHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHH-----HHhccCCCHHHHHHHHHHhcCCcccCcCHHHH
Confidence 44444444433333222222111110 000000 000000 00112467889999999999999999999999
Q ss_pred hcCCCC
Q 035861 304 LNHYWF 309 (332)
Q Consensus 304 l~hp~f 309 (332)
++||||
T Consensus 311 l~~~~f 316 (316)
T cd07842 311 LEHPYF 316 (316)
T ss_pred hcCCCC
Confidence 999998
No 158
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=5.5e-44 Score=313.62 Aligned_cols=293 Identities=19% Similarity=0.245 Sum_probs=204.0
Q ss_pred ccccccccc--CcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCCe
Q 035861 14 EKLNKISEG--TYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHDS 91 (332)
Q Consensus 14 ~~~~~lg~g--~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 91 (332)
++++.||+| ++++||++.+..+++.||+|++......... ...+.+|+.+++.++||||+++++++..+ ..
T Consensus 1 ~~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~------~~~~~~e~~~l~~l~hpniv~~~~~~~~~-~~ 73 (327)
T cd08227 1 ELLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEM------VTFLQGELHVSKLFNHPNIVPYRATFIAD-NE 73 (327)
T ss_pred ChhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHH------HHHHHHHHHHHHhcCCCCeeeEEEEEEEC-CE
Confidence 367889999 7899999999999999999998754332211 11355799999999999999999999555 78
Q ss_pred EEEEcccccccHH-HHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCC
Q 035861 92 VYMVMEYMEHDLK-WLMESM-KQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGS 169 (332)
Q Consensus 92 ~~lv~e~~~~~l~-~~~~~~-~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~ 169 (332)
.++|+||++++.+ +.+... ...+++..++.++.|++.||+|||++|++|+||||+||+++.++.++++||+.+.....
T Consensus 74 ~~lv~e~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~ 153 (327)
T cd08227 74 LWVVTSFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMIN 153 (327)
T ss_pred EEEEEeccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEecCCcEEEcccchhhcccc
Confidence 9999999997544 444332 35689999999999999999999999999999999999999999999999986543311
Q ss_pred CCC-------CCccccccccccchhhhcCC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCC----
Q 035861 170 PLK-------PYTSLVVTLWYRAPELLLGA-KKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTP---- 237 (332)
Q Consensus 170 ~~~-------~~~~~~~~~~y~aPE~~~~~-~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~---- 237 (332)
... ......++..|+|||++... ..++.++|+||||+++|++++|..||.................+.
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 233 (327)
T cd08227 154 HGQRLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDT 233 (327)
T ss_pred ccccccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCccccccc
Confidence 111 01123456779999998753 358899999999999999999999998766544433332211100
Q ss_pred ----CCCcccCCCCCccccccccCCchh-hhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCC
Q 035861 238 ----TETIWPGLSELPGAKANFAKQPYN-LLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEV 312 (332)
Q Consensus 238 ----~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~ 312 (332)
++...-.................. ................+++.+.+||.+||+.||++|||++++++||||+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~p~f~~~ 313 (327)
T cd08227 234 TTIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQI 313 (327)
T ss_pred cchhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcChhhhhc
Confidence 000000000000000000000000 000000011111233467899999999999999999999999999999986
Q ss_pred C
Q 035861 313 P 313 (332)
Q Consensus 313 ~ 313 (332)
.
T Consensus 314 ~ 314 (327)
T cd08227 314 K 314 (327)
T ss_pred c
Confidence 5
No 159
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=4.9e-44 Score=315.11 Aligned_cols=290 Identities=39% Similarity=0.671 Sum_probs=220.7
Q ss_pred hhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCC
Q 035861 10 VFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDH 89 (332)
Q Consensus 10 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 89 (332)
-++|++.+.||+|++|.||+|++..+++.||+|++....... ....+..|+.+++.++|+||+++++++....
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~-------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 76 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQT-------FCQRTLREIKILRRFKHENIIGILDIIRPPS 76 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccch-------hHHHHHHHHHHHHhCCCCCcCchhheeeccc
Confidence 358999999999999999999999999999999986422111 1124568999999999999999998874332
Q ss_pred ----CeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeeccccc
Q 035861 90 ----DSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSR 165 (332)
Q Consensus 90 ----~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~ 165 (332)
...++++|++++++...+. ...+++..++.++.|++.||++||+.|++|+||+|+||+++.++.++|+|||++.
T Consensus 77 ~~~~~~~~lv~e~~~~~l~~~~~--~~~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~ 154 (336)
T cd07849 77 FESFNDVYIVQELMETDLYKLIK--TQHLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTNCDLKICDFGLAR 154 (336)
T ss_pred ccccceEEEEehhcccCHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEECccccee
Confidence 3579999999998776554 4579999999999999999999999999999999999999999999999999987
Q ss_pred ccCCCCC---CCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcc
Q 035861 166 QYGSPLK---PYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIW 242 (332)
Q Consensus 166 ~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 242 (332)
....... ......++..|+|||.+.+...++.++|+||||+++|+|++|..||...+.......+....+.+....+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 234 (336)
T cd07849 155 IADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDL 234 (336)
T ss_pred eccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHH
Confidence 6533221 1233467889999998876567899999999999999999999999887776666666655554433322
Q ss_pred cCCCCCccccccccCCchhhhhhh--CCCCc-cCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCCCCCC
Q 035861 243 PGLSELPGAKANFAKQPYNLLRKR--FPAAS-FTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVPLPKS 317 (332)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~~~ 317 (332)
..+....... ..... .+... ....+.++.++.+||.+||+.+|++||++.++++||||.+..-+..
T Consensus 235 ~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~~~~~~ 303 (336)
T cd07849 235 NCIISLRARN---------YIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQYHDPSD 303 (336)
T ss_pred HHhhchhhhh---------HHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCccccccCCCCC
Confidence 2111100000 00000 00000 0112346888999999999999999999999999999999875543
No 160
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.6e-46 Score=325.62 Aligned_cols=262 Identities=24% Similarity=0.422 Sum_probs=225.6
Q ss_pred hcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCC
Q 035861 11 FEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHD 90 (332)
Q Consensus 11 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 90 (332)
+-|.++..||.|+||.||++..+.++...|.|++........ .+++-|+++|..+.||+|+.+++.|.-+ +
T Consensus 32 d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEEL--------EDylVEIeILa~CdHP~ivkLl~ayy~e-n 102 (1187)
T KOG0579|consen 32 DHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEEL--------EDYLVEIEILAECDHPVIVKLLSAYYFE-N 102 (1187)
T ss_pred HHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHH--------hhhhhhhhhhhcCCChHHHHHHHHHhcc-C
Confidence 357899999999999999999999999899999876543221 1457899999999999999999988444 7
Q ss_pred eEEEEcccccccHHHHH-HhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCC
Q 035861 91 SVYMVMEYMEHDLKWLM-ESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGS 169 (332)
Q Consensus 91 ~~~lv~e~~~~~l~~~~-~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~ 169 (332)
.++|..|+|+|+-.+.+ ......+.+.++..+++|++.||.|||+.+|+|+|||..|||++-+|.++|.|||.+.....
T Consensus 103 kLwiliEFC~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~ 182 (1187)
T KOG0579|consen 103 KLWILIEFCGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLTLDGDIRLADFGVSAKNKS 182 (1187)
T ss_pred ceEEEEeecCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEEecCcEeeecccccccchh
Confidence 79999999998866654 45577899999999999999999999999999999999999999999999999999887766
Q ss_pred CCCCCccccccccccchhhhcC----CCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCC
Q 035861 170 PLKPYTSLVVTLWYRAPELLLG----AKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGL 245 (332)
Q Consensus 170 ~~~~~~~~~~~~~y~aPE~~~~----~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (332)
........+||++|||||+..+ ..+|++++||||||++|-+|+.+.+|-...+....+.++.+..++..
T Consensus 183 t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVllKiaKSePPTL------- 255 (1187)
T KOG0579|consen 183 TRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTL------- 255 (1187)
T ss_pred HHhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHHHHHhhcCCCcc-------
Confidence 6667788999999999999864 35799999999999999999999999999888888777766533221
Q ss_pred CCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCCCC
Q 035861 246 SELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVPLP 315 (332)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~ 315 (332)
..++..+.++.+|+.+||.+||..||++.++|+||||+++++.
T Consensus 256 ---------------------------lqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~Hpfv~~~~Sn 298 (1187)
T KOG0579|consen 256 ---------------------------LQPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKHPFVQNAPSN 298 (1187)
T ss_pred ---------------------------cCcchhhhHHHHHHHHHHhcCCccCCCHHHHhhCcccccCCcc
Confidence 1233468899999999999999999999999999999988754
No 161
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=1e-43 Score=309.41 Aligned_cols=292 Identities=23% Similarity=0.369 Sum_probs=212.1
Q ss_pred hcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCC
Q 035861 11 FEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHD 90 (332)
Q Consensus 11 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 90 (332)
++|++.+.||+|++|.||++.+..++..+++|.+....... ....+.+|++++++++||||+++++.+..+ .
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~-------~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-~ 72 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPA-------IRNQIIRELKVLHECNSPYIVGFYGAFYSD-G 72 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHH-------HHHHHHHHHHHHHhCCCCCCCeEEEEEeeC-C
Confidence 47999999999999999999999999999999886432111 112467899999999999999999998554 7
Q ss_pred eEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH-CCcccccCCCCCEEEcCCCcEEEeecccccccCC
Q 035861 91 SVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHD-NWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGS 169 (332)
Q Consensus 91 ~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~-~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~ 169 (332)
..++++||++|+.+..+....+.+++..+..++.|++.||+|||+ .+++|+||+|+||+++.++.++|+|||.+.....
T Consensus 73 ~~~lv~ey~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~ 152 (308)
T cd06615 73 EISICMEHMDGGSLDQVLKKAGRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID 152 (308)
T ss_pred EEEEEeeccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEecCCcEEEccCCCcccccc
Confidence 899999999976555555556789999999999999999999997 6999999999999999999999999998865432
Q ss_pred CCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCCc
Q 035861 170 PLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELP 249 (332)
Q Consensus 170 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (332)
. ......++..|+|||.+.+ ..++.++|+||||+++|++++|..||...+.... ............. +......
T Consensus 153 ~--~~~~~~~~~~~~aPE~~~~-~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~ 226 (308)
T cd06615 153 S--MANSFVGTRSYMSPERLQG-THYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKEL-EAMFGRPVSEGEA--KESHRPV 226 (308)
T ss_pred c--ccccCCCCcCccChhHhcC-CCCCccchHHHHHHHHHHHHhCCCCCCCcchhhH-HHhhcCccccccc--cCCcccc
Confidence 2 1234567889999999876 5688999999999999999999999976553322 2222111000000 0000000
Q ss_pred cccccccCC---chhhhhhhCCCC-ccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCCCCC
Q 035861 250 GAKANFAKQ---PYNLLRKRFPAA-SFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVPLPK 316 (332)
Q Consensus 250 ~~~~~~~~~---~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~~ 316 (332)
......... ............ ...+...++.++++|+.+||+.+|++||+++++++||||.++..++
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~~~~ 297 (308)
T cd06615 227 SGHPPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHPFIKRAELEE 297 (308)
T ss_pred cCCCCCccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhhccccc
Confidence 000000000 000001001111 1111223788899999999999999999999999999999876554
No 162
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-45 Score=320.87 Aligned_cols=257 Identities=29% Similarity=0.494 Sum_probs=223.9
Q ss_pred cccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCCe
Q 035861 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHDS 91 (332)
Q Consensus 12 ~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 91 (332)
-|.-++.||.|+||.||-+++..+.+.||||.+.-+-..... ...+|+.|+..|+++.|||++.+.|.|..+ ..
T Consensus 27 lf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~E-----KWqDIlKEVrFL~~l~HPntieYkgCyLre-~T 100 (948)
T KOG0577|consen 27 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNE-----KWQDILKEVRFLRQLRHPNTIEYKGCYLRE-HT 100 (948)
T ss_pred HHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHH-----HHHHHHHHHHHHHhccCCCcccccceeecc-ch
Confidence 477788999999999999999999999999999654321111 134789999999999999999999999666 77
Q ss_pred EEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCCCC
Q 035861 92 VYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPL 171 (332)
Q Consensus 92 ~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~~~ 171 (332)
.|+|||||-|+-.+.+.-..+++-+.++..|+.+.+.||+|||+++.+|+|||..|||+++.|.|||+|||++....
T Consensus 101 aWLVMEYClGSAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~--- 177 (948)
T KOG0577|consen 101 AWLVMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLSEPGLVKLADFGSASIMA--- 177 (948)
T ss_pred HHHHHHHHhccHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEecCCCeeeeccccchhhcC---
Confidence 89999999998888888888999999999999999999999999999999999999999999999999999998753
Q ss_pred CCCccccccccccchhhhc--CCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCCc
Q 035861 172 KPYTSLVVTLWYRAPELLL--GAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELP 249 (332)
Q Consensus 172 ~~~~~~~~~~~y~aPE~~~--~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (332)
+.....||++|||||++. ..++|+-+.||||||++.-+++..++|+.+.+....+.-|....++..+
T Consensus 178 -PAnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALYHIAQNesPtLq---------- 246 (948)
T KOG0577|consen 178 -PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPTLQ---------- 246 (948)
T ss_pred -chhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHHHHHHhcCCCCCC----------
Confidence 346789999999999983 5578999999999999999999999999999988887777654333322
Q ss_pred cccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCC
Q 035861 250 GAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVP 313 (332)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~ 313 (332)
.+..|..+++||..||++-|.+|||++++|+|+|...=.
T Consensus 247 -------------------------s~eWS~~F~~Fvd~CLqKipqeRptse~ll~H~fv~R~R 285 (948)
T KOG0577|consen 247 -------------------------SNEWSDYFRNFVDSCLQKIPQERPTSEELLKHRFVLRER 285 (948)
T ss_pred -------------------------CchhHHHHHHHHHHHHhhCcccCCcHHHHhhcchhccCC
Confidence 233688999999999999999999999999999987633
No 163
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=5.2e-44 Score=327.95 Aligned_cols=257 Identities=28% Similarity=0.413 Sum_probs=208.5
Q ss_pred hhcccccccccccCcEEEEEEEECCC-CcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcC
Q 035861 10 VFEFEKLNKISEGTYGIVYRARDKKS-GEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDD 88 (332)
Q Consensus 10 ~~~y~~~~~lg~g~~g~v~~~~~~~~-~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 88 (332)
...|.+.+.||+|++|.||+|....+ +..||+|.+....... ...+..|+.+++.++||||+++++.+..+
T Consensus 66 ~~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~--------~~~~~~E~~~l~~l~Hpniv~~~~~~~~~ 137 (478)
T PTZ00267 66 EHMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQ--------AAYARSELHCLAACDHFGIVKHFDDFKSD 137 (478)
T ss_pred ceeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHH--------HHHHHHHHHHHHhCCCCCEeEEEEEEEEC
Confidence 34599999999999999999998877 7788888764332111 11346799999999999999999998554
Q ss_pred CCeEEEEccccccc-HHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccc
Q 035861 89 HDSVYMVMEYMEHD-LKWLMES---MKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMS 164 (332)
Q Consensus 89 ~~~~~lv~e~~~~~-l~~~~~~---~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~ 164 (332)
...|+||||++|+ +.+.+.. ...++++..+..++.|++.||+|||++||+||||||+||+++.++.++|+|||++
T Consensus 138 -~~~~lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~~~~~kL~DFgla 216 (478)
T PTZ00267 138 -DKLLLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLMPTGIIKLGDFGFS 216 (478)
T ss_pred -CEEEEEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEECCCCcEEEEeCcCc
Confidence 7899999999864 4444332 2456899999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCC--CCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcc
Q 035861 165 RQYGSPLK--PYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIW 242 (332)
Q Consensus 165 ~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 242 (332)
........ ......|++.|+|||++.+ ..++.++|+||||+++|+|++|..||...+..+....+......+
T Consensus 217 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~----- 290 (478)
T PTZ00267 217 KQYSDSVSLDVASSFCGTPYYLAPELWER-KRYSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQVLYGKYDP----- 290 (478)
T ss_pred eecCCccccccccccCCCccccCHhHhCC-CCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCC-----
Confidence 86543221 2334568999999999877 678999999999999999999999998877766555554321111
Q ss_pred cCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCC
Q 035861 243 PGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEV 312 (332)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~ 312 (332)
.+..++.++.+||.+||+.||++||++++++.|||++.+
T Consensus 291 -------------------------------~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~~~~~~~~ 329 (478)
T PTZ00267 291 -------------------------------FPCPVSSGMKALLDPLLSKNPALRPTTQQLLHTEFLKYV 329 (478)
T ss_pred -------------------------------CCccCCHHHHHHHHHHhccChhhCcCHHHHHhCHHHHHH
Confidence 112378899999999999999999999999999998754
No 164
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=7.3e-44 Score=304.12 Aligned_cols=260 Identities=28% Similarity=0.470 Sum_probs=207.2
Q ss_pred cccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcc-cccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCC
Q 035861 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKE-DCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHD 90 (332)
Q Consensus 12 ~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~-~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 90 (332)
+|.+...||.|++|.||+|.+..++..+++|.+........ ..........+.+|+.++++++||||+++++.+.+. .
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-~ 79 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDA-D 79 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeC-C
Confidence 47788999999999999999988899999998875543221 111111122466899999999999999999998554 7
Q ss_pred eEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCCC
Q 035861 91 SVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSP 170 (332)
Q Consensus 91 ~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~~ 170 (332)
..++++||++++.+.......+.+++..+..++.|++.||++||++|++|+||+|+||+++.++.++|+|||.+.....+
T Consensus 80 ~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~~~~~~~~l~dfg~~~~~~~~ 159 (267)
T cd06628 80 HLNIFLEYVPGGSVAALLNNYGAFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVDNKGGIKISDFGISKKLEAN 159 (267)
T ss_pred ccEEEEEecCCCCHHHHHHhccCccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEEcCCCCEEecccCCCcccccc
Confidence 88999999987655555555678999999999999999999999999999999999999999999999999988765422
Q ss_pred CC------CCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccC
Q 035861 171 LK------PYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPG 244 (332)
Q Consensus 171 ~~------~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (332)
.. ......++..|+|||.+.+ ..++.++|+||||+++|++++|..||...+......++.....
T Consensus 160 ~~~~~~~~~~~~~~~~~~y~~pe~~~~-~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~--------- 229 (267)
T cd06628 160 SLSTKTNGARPSLQGSVFWMAPEVVKQ-TSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIFKIGENAS--------- 229 (267)
T ss_pred cccCCccccccccCCCcCccChhHhcc-CCCCchhhhHHHHHHHHHHhhCCCCCCCccHHHHHHHHhccCC---------
Confidence 11 1123457788999999876 5678899999999999999999999987665444333322100
Q ss_pred CCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCC
Q 035861 245 LSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWF 309 (332)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f 309 (332)
...+..++..+.++|++||+.||.+||++.++++||||
T Consensus 230 ---------------------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~ 267 (267)
T cd06628 230 ---------------------------PEIPSNISSEAIDFLEKTFEIDHNKRPTAAELLKHPFL 267 (267)
T ss_pred ---------------------------CcCCcccCHHHHHHHHHHccCCchhCcCHHHHhhCCCC
Confidence 01122378899999999999999999999999999998
No 165
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=5.8e-47 Score=306.01 Aligned_cols=258 Identities=28% Similarity=0.503 Sum_probs=221.5
Q ss_pred cccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCCe
Q 035861 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHDS 91 (332)
Q Consensus 12 ~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 91 (332)
-|.++++||+|++|.||+++++.+|..+|||.+.....-. .+..|+.++.++.++++++++|.++.. ..
T Consensus 34 VFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~sDLQ----------EIIKEISIMQQC~S~yVVKYYGSYFK~-sD 102 (502)
T KOG0574|consen 34 VFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVDTDLQ----------EIIKEISIMQQCKSKYVVKYYGSYFKH-SD 102 (502)
T ss_pred HHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCccchHH----------HHHHHHHHHHHcCCchhhhhhhhhccC-Cc
Confidence 4889999999999999999999999999999997654322 467999999999999999999999766 66
Q ss_pred EEEEccccc-ccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCCC
Q 035861 92 VYMVMEYME-HDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSP 170 (332)
Q Consensus 92 ~~lv~e~~~-~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~~ 170 (332)
+|||||||+ |+..+.++.+++++++.++..++...+.+|+|||...-+|+|||..|||+..+|..||.|||.+...+..
T Consensus 103 LWIVMEYCGAGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDT 182 (502)
T KOG0574|consen 103 LWIVMEYCGAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDT 182 (502)
T ss_pred eEeehhhcCCCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEcccchhhhhhccccchhhhh
Confidence 999999999 5677788888999999999999999999999999999999999999999999999999999999988776
Q ss_pred CCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCCcc
Q 035861 171 LKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPG 250 (332)
Q Consensus 171 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (332)
.....+.+||+.|+|||++.. -.|+..+||||||++.-||+.|++||.+-..... ++.....|+..
T Consensus 183 MAKRNTVIGTPFWMAPEVI~E-IGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRA---IFMIPT~PPPT---------- 248 (502)
T KOG0574|consen 183 MAKRNTVIGTPFWMAPEVIEE-IGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRA---IFMIPTKPPPT---------- 248 (502)
T ss_pred HHhhCccccCcccccHHHHHH-hccchhhhHhhhcchhhhhhcCCCCcccccccce---eEeccCCCCCC----------
Confidence 667788999999999999987 5689999999999999999999999987654322 22111111111
Q ss_pred ccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCCCC
Q 035861 251 AKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVPLP 315 (332)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~ 315 (332)
+..+...|.++.+||++||-+.|++|.++-++++|||+++...-
T Consensus 249 ---------------------F~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H~FiknA~g~ 292 (502)
T KOG0574|consen 249 ---------------------FKKPEEWSSEFNDFIRSCLIKKPEERKTALRLCEHTFIKNAPGC 292 (502)
T ss_pred ---------------------CCChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhhhhhcCCCcc
Confidence 11122268899999999999999999999999999999987643
No 166
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=1.3e-43 Score=301.76 Aligned_cols=257 Identities=30% Similarity=0.469 Sum_probs=208.2
Q ss_pred hcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCC
Q 035861 11 FEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHD 90 (332)
Q Consensus 11 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 90 (332)
++|++.+.||.|++|.||+|.+..+++.+++|++....... ...+.+|+.++++++|||++++++.+..+ .
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~--------~~~~~~e~~~l~~~~h~~i~~~~~~~~~~-~ 73 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDD--------FEIIQQEISMLKECRHPNIVAYFGSYLRR-D 73 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhh--------HHHHHHHHHHHHhCCCCChhceEEEEEeC-C
Confidence 57999999999999999999999889999999997543221 12567899999999999999999988554 7
Q ss_pred eEEEEcccccccHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCC
Q 035861 91 SVYMVMEYMEHDLKWLMESMK-QPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGS 169 (332)
Q Consensus 91 ~~~lv~e~~~~~l~~~~~~~~-~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~ 169 (332)
..+++|||++++.+..+.... ..+++..+..++.|++.||+|||++|++|+||+|+||+++.++.++|+|||.+.....
T Consensus 74 ~~~l~~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~ 153 (262)
T cd06613 74 KLWIVMEYCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLTEDGDVKLADFGVSAQLTA 153 (262)
T ss_pred EEEEEEeCCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEECCCCCEEECccccchhhhh
Confidence 899999999986555544433 7899999999999999999999999999999999999999999999999999876544
Q ss_pred CCCCCccccccccccchhhhcCC--CCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCC
Q 035861 170 PLKPYTSLVVTLWYRAPELLLGA--KKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSE 247 (332)
Q Consensus 170 ~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (332)
.........++..|+|||.+... ..++.++|+||||+++|+|++|..||...........+......+.
T Consensus 154 ~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~--------- 224 (262)
T cd06613 154 TIAKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLISKSNFPPP--------- 224 (262)
T ss_pred hhhccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCc---------
Confidence 33333455678889999998652 2678899999999999999999999987665544433322210000
Q ss_pred CccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCC
Q 035861 248 LPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYW 308 (332)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~ 308 (332)
.......++.++.+|+.+||..+|.+||++.+++.|+|
T Consensus 225 -----------------------~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~ 262 (262)
T cd06613 225 -----------------------KLKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQHPF 262 (262)
T ss_pred -----------------------cccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhcCCC
Confidence 00011225778999999999999999999999999998
No 167
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=9.1e-44 Score=306.04 Aligned_cols=282 Identities=49% Similarity=0.889 Sum_probs=224.1
Q ss_pred ccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCCeE
Q 035861 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHDSV 92 (332)
Q Consensus 13 y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 92 (332)
|++.+.||.|++|.||++.+..+++.+++|.+........ ....+..|+..+++++|++++++++.+..+ ...
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~------~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-~~~ 73 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEG------IPKTALREIKLLKELNHPNIIKLLDVFRHK-GDL 73 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccch------hHHHHHHHHHHHHHhcCCCcchHHHhhccC-CCE
Confidence 6788999999999999999998999999999875443211 112456899999999999999999998544 789
Q ss_pred EEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCCCCC
Q 035861 93 YMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLK 172 (332)
Q Consensus 93 ~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~~~~ 172 (332)
++|+||+++++.+.+......+++..+..++.|++.||++||+.|++|+||+|+||+++.++.++|+|||.+........
T Consensus 74 ~~v~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~~ 153 (283)
T cd05118 74 YLVFEFMDTDLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLINTEGVLKLADFGLARSFGSPVR 153 (283)
T ss_pred EEEEeccCCCHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCcc
Confidence 99999999998888877667899999999999999999999999999999999999999999999999999877654432
Q ss_pred CCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCCcccc
Q 035861 173 PYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGAK 252 (332)
Q Consensus 173 ~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (332)
......++..|+|||.+.+...++.++|+||||+++|++++|..||...+..+....+......+....++.+.......
T Consensus 154 ~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (283)
T cd05118 154 PYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNY 233 (283)
T ss_pred cccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhh
Confidence 33345678889999998875578999999999999999999999999888877777776665555444443332211100
Q ss_pred -ccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCC
Q 035861 253 -ANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWF 309 (332)
Q Consensus 253 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f 309 (332)
..... ..........+.++..+++||.+||+.||.+||++++++.||||
T Consensus 234 ~~~~~~--------~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~~~~ 283 (283)
T cd05118 234 KFSFPK--------KAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAHPYF 283 (283)
T ss_pred hhhhcc--------ccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhCCCC
Confidence 00000 00000011223478899999999999999999999999999997
No 168
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00 E-value=6.1e-44 Score=313.91 Aligned_cols=293 Identities=40% Similarity=0.661 Sum_probs=227.8
Q ss_pred cccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCC--
Q 035861 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDH-- 89 (332)
Q Consensus 12 ~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-- 89 (332)
+|++.+.||.|++|.||+|++..+++.++||.+....... .....+.+|+..++.++|+||+++.+++....
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~------~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 74 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDL------IDAKRILREIKLLRHLRHENIIGLLDILRPPSPE 74 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccc------hhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcc
Confidence 5899999999999999999999889999999987543211 11225678999999999999999999985553
Q ss_pred --CeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeeccccccc
Q 035861 90 --DSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQY 167 (332)
Q Consensus 90 --~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~ 167 (332)
...|++|||+++++...+.. ...+++..++.++.||+.||++||+.|++|+||||.||+++.++.++|+|||.+...
T Consensus 75 ~~~~~~lv~e~~~~~l~~~l~~-~~~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~~~~~~~L~dfg~~~~~ 153 (330)
T cd07834 75 DFNDVYIVTELMETDLHKVIKS-PQPLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVNSNCDLKICDFGLARGV 153 (330)
T ss_pred cccceEEEecchhhhHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccCceEee
Confidence 36899999999877666654 558999999999999999999999999999999999999999999999999999876
Q ss_pred CCCC---CCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccC
Q 035861 168 GSPL---KPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPG 244 (332)
Q Consensus 168 ~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (332)
.... .......++..|+|||.+.+...++.++|+||||+++|+|++|..||...+..+....+....+.+....+..
T Consensus 154 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 233 (330)
T cd07834 154 DPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKF 233 (330)
T ss_pred cccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhhh
Confidence 4432 1233456788899999998754789999999999999999999999999988888888877766555443321
Q ss_pred CCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCCCCCC
Q 035861 245 LSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVPLPKS 317 (332)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~~~ 317 (332)
......... . ...............+.++..+.+||.+||+++|++||++++++.||||.++.-+..
T Consensus 234 ~~~~~~~~~-~-----~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~~~~~ 300 (330)
T cd07834 234 ITSEKARNY-L-----KSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLHDPED 300 (330)
T ss_pred ccccchhhH-H-----hhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhccccc
Confidence 111000000 0 000000000011112347889999999999999999999999999999999876543
No 169
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=4.5e-44 Score=315.11 Aligned_cols=292 Identities=39% Similarity=0.693 Sum_probs=226.4
Q ss_pred hcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEc---
Q 035861 11 FEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMD--- 87 (332)
Q Consensus 11 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--- 87 (332)
.+|++.+.||.|++|.||+|.+..++..|++|++....... .....+.+|+.++++++||||+++++++..
T Consensus 5 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~------~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 78 (334)
T cd07855 5 SRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVP------TLAKRTLRELKILRHFKHDNIIAIRDILRPPGA 78 (334)
T ss_pred hceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccc------cchHHHHHHHHHHHhcCCCCccCHHHhccccCC
Confidence 68999999999999999999999999999999986532211 112245689999999999999999987743
Q ss_pred CCCeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeeccccccc
Q 035861 88 DHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQY 167 (332)
Q Consensus 88 ~~~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~ 167 (332)
.....++|+||++|++.+.+.. ...+++..++.++.||+.||+|||++|++|+||+|+||+++.++.++|+|||.+...
T Consensus 79 ~~~~~~lv~e~~~~~l~~~~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~ 157 (334)
T cd07855 79 DFKDVYVVMDLMESDLHHIIHS-DQPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVNEDCELRIGDFGMARGL 157 (334)
T ss_pred CCceEEEEEehhhhhHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEecccccceee
Confidence 2356899999999877666654 567999999999999999999999999999999999999999999999999998765
Q ss_pred CCCCC----CCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCccc
Q 035861 168 GSPLK----PYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWP 243 (332)
Q Consensus 168 ~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (332)
..... ......++..|+|||.+.....++.++|+||||+++|+|++|..||...+.......+....+.++...+.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~ 237 (334)
T cd07855 158 SSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLN 237 (334)
T ss_pred cccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhhh
Confidence 32211 11234678899999998765668999999999999999999999998887777766666666665544433
Q ss_pred CCCCCccccccccCCchhhhhhhCCCCc----cCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCCCCCCCC
Q 035861 244 GLSELPGAKANFAKQPYNLLRKRFPAAS----FTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVPLPKSKD 319 (332)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~~~~~ 319 (332)
........ ... ...+... ....+.++..+.++|.+||+.+|++||++++++.||||.+.+.+....
T Consensus 238 ~~~~~~~~---------~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~~~~~~~~~~~~ 307 (334)
T cd07855 238 RIGSDRVR---------KYI-QNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQHPFLAQYHDPDDEP 307 (334)
T ss_pred hhchhhHH---------HHH-hhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhChhhhhccCCcccc
Confidence 22110000 000 0000000 011234688999999999999999999999999999999888766533
No 170
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=1.3e-43 Score=303.81 Aligned_cols=259 Identities=25% Similarity=0.414 Sum_probs=210.3
Q ss_pred hcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCC
Q 035861 11 FEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHD 90 (332)
Q Consensus 11 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 90 (332)
++|++.+.||.|++|.||+|.+..+++.+++|.+........ ...+.+|+..++.+.|+|++++.+.+.++ .
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~-------~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-~ 72 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDE-------IEDIQQEIQFLSQCRSPYITKYYGSFLKG-S 72 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchH-------HHHHHHHHHHHHHcCCCCeeeeeEEEEEC-C
Confidence 479999999999999999999999999999999875432111 11356899999999999999999998655 8
Q ss_pred eEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCCC
Q 035861 91 SVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSP 170 (332)
Q Consensus 91 ~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~~ 170 (332)
..++|+|+++++.+...... ..+++..++.++.|++.||.+||+.|++|+||+|+||+++.++.++|+|||.+......
T Consensus 73 ~~~~v~e~~~~~~L~~~~~~-~~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~ 151 (274)
T cd06609 73 KLWIIMEYCGGGSCLDLLKP-GKLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLSEEGDVKLADFGVSGQLTST 151 (274)
T ss_pred eEEEEEEeeCCCcHHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEcccccceeeccc
Confidence 89999999987554444442 38999999999999999999999999999999999999999999999999999876544
Q ss_pred CCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCCcc
Q 035861 171 LKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPG 250 (332)
Q Consensus 171 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (332)
........++..|+|||.+.+ ..++.++|+||||+++|++++|..||...+.......+.......
T Consensus 152 ~~~~~~~~~~~~y~~PE~~~~-~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~------------- 217 (274)
T cd06609 152 MSKRNTFVGTPFWMAPEVIKQ-SGYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIPKNNPPS------------- 217 (274)
T ss_pred ccccccccCCccccChhhhcc-CCCCchhhHHHHHHHHHHHHhCCCCcccCchHHHHHHhhhcCCCC-------------
Confidence 333445567888999999987 558999999999999999999999997765443333222211000
Q ss_pred ccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCCC
Q 035861 251 AKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVPL 314 (332)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~ 314 (332)
.....++..+.+++.+||..+|++||+++++++||||.+...
T Consensus 218 ----------------------~~~~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~~~~~~~~~~ 259 (274)
T cd06609 218 ----------------------LEGNKFSKPFKDFVSLCLNKDPKERPSAKELLKHKFIKKAKK 259 (274)
T ss_pred ----------------------CcccccCHHHHHHHHHHhhCChhhCcCHHHHhhChhhcCCCc
Confidence 001116788999999999999999999999999999988543
No 171
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-45 Score=340.64 Aligned_cols=279 Identities=26% Similarity=0.380 Sum_probs=235.7
Q ss_pred hhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCC
Q 035861 10 VFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDH 89 (332)
Q Consensus 10 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 89 (332)
-++|.+++.||+|+||.|.+++++.|++.||.|++.+-...+ +....-|++|-.+|.--+.+=|+.++..| +++
T Consensus 74 ~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlK-----r~~tA~F~EERDimv~~ns~Wiv~LhyAF-QD~ 147 (1317)
T KOG0612|consen 74 AEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLK-----RAETACFREERDIMVFGNSEWIVQLHYAF-QDE 147 (1317)
T ss_pred HHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhh-----chhHHHHHHHhHHHHcCCcHHHHHHHHHh-cCc
Confidence 469999999999999999999999999999999997632221 12223567888888877888888888888 666
Q ss_pred CeEEEEcccccc-cHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccC
Q 035861 90 DSVYMVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYG 168 (332)
Q Consensus 90 ~~~~lv~e~~~~-~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~ 168 (332)
.++|+||||++| +++..+.+.. .+++..++.++..|..||..||+.|+|||||||+|||+|..|+++|.|||.|...+
T Consensus 148 ~~LYlVMdY~pGGDlltLlSk~~-~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld~~GHikLADFGsClkm~ 226 (1317)
T KOG0612|consen 148 RYLYLVMDYMPGGDLLTLLSKFD-RLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLDKSGHIKLADFGSCLKMD 226 (1317)
T ss_pred cceEEEEecccCchHHHHHhhcC-CChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEecccCcEeeccchhHHhcC
Confidence 999999999986 5666666644 99999999999999999999999999999999999999999999999999998876
Q ss_pred CCC-CCCccccccccccchhhhcC---C-CCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCccc
Q 035861 169 SPL-KPYTSLVVTLWYRAPELLLG---A-KKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWP 243 (332)
Q Consensus 169 ~~~-~~~~~~~~~~~y~aPE~~~~---~-~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (332)
..+ -......|||.|.|||++.. + +.|+...|.|||||++|||+.|..||...+.-+++.+|++-..
T Consensus 227 ~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~KIm~hk~-------- 298 (1317)
T KOG0612|consen 227 ADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGKIMNHKE-------- 298 (1317)
T ss_pred CCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHHHhchhh--------
Confidence 433 34566789999999999852 2 5789999999999999999999999999999999999886410
Q ss_pred CCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCC---HHHHhcCCCCCCCCCCCCCCC
Q 035861 244 GLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRIT---VDDALNHYWFHEVPLPKSKDF 320 (332)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps---~~ell~hp~f~~~~~~~~~~~ 320 (332)
...++....+|.++++||.+++.. |+.|.. ++++-.||||.++.|..++..
T Consensus 299 -------------------------~l~FP~~~~VSeeakdLI~~ll~~-~e~RLgrngiedik~HpFF~g~~W~~iR~~ 352 (1317)
T KOG0612|consen 299 -------------------------SLSFPDETDVSEEAKDLIEALLCD-REVRLGRNGIEDIKNHPFFEGIDWDNIRES 352 (1317)
T ss_pred -------------------------hcCCCcccccCHHHHHHHHHHhcC-hhhhcccccHHHHHhCccccCCChhhhhhc
Confidence 011112234899999999998874 889998 999999999999999999999
Q ss_pred CCCCCCccc
Q 035861 321 MPTFPPQHA 329 (332)
Q Consensus 321 ~~~~~~~~~ 329 (332)
.|++-|-.-
T Consensus 353 ~pP~vPevs 361 (1317)
T KOG0612|consen 353 VPPVVPEVS 361 (1317)
T ss_pred CCCCCCcCC
Confidence 999988643
No 172
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=2.2e-43 Score=302.03 Aligned_cols=255 Identities=24% Similarity=0.410 Sum_probs=203.1
Q ss_pred hcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhC-CCCCeeeeeeeEEcC-
Q 035861 11 FEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSF-DHPSIVNVKEVVMDD- 88 (332)
Q Consensus 11 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~- 88 (332)
+.|++.+.||.|++|.||+|.+..+++.+|+|++....... ..+..|+..++++ .|+|++++.+.+...
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~---------~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~ 76 (272)
T cd06637 6 GIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEE---------EEIKQEINMLKKYSHHRNIATYYGAFIKKN 76 (272)
T ss_pred hhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCccH---------HHHHHHHHHHHHhcCCCCeeeEeeEEeecC
Confidence 46899999999999999999999999999999986543211 1356888999888 799999999998643
Q ss_pred ----CCeEEEEccccccc-HHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecc
Q 035861 89 ----HDSVYMVMEYMEHD-LKWLMESM-KQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFG 162 (332)
Q Consensus 89 ----~~~~~lv~e~~~~~-l~~~~~~~-~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~ 162 (332)
....++++||++++ +.+.+... ...+++..+..++.|++.||+|||++|++|+||+|+||+++.++.++|+|||
T Consensus 77 ~~~~~~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili~~~~~~~l~Dfg 156 (272)
T cd06637 77 PPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFG 156 (272)
T ss_pred CCCCCcEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEECCCCCEEEccCC
Confidence 24689999999874 44444432 3468999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCCCCCccccccccccchhhhcC----CCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCC
Q 035861 163 MSRQYGSPLKPYTSLVVTLWYRAPELLLG----AKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPT 238 (332)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~----~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~ 238 (332)
.+..............|+..|+|||++.. ...++.++|+||+|+++|+|++|..||...............
T Consensus 157 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~~~~~----- 231 (272)
T cd06637 157 VSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRN----- 231 (272)
T ss_pred CceecccccccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhcC-----
Confidence 98765433333445678889999999863 235788999999999999999999999765443322221110
Q ss_pred CCcccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCC
Q 035861 239 ETIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWF 309 (332)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f 309 (332)
.........++..+.+|+.+||..+|.+||++.++++||||
T Consensus 232 ------------------------------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~~ 272 (272)
T cd06637 232 ------------------------------PAPRLKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMKHPFI 272 (272)
T ss_pred ------------------------------CCCCCCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhhCCCC
Confidence 00011122367889999999999999999999999999998
No 173
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=100.00 E-value=1.8e-43 Score=312.10 Aligned_cols=288 Identities=36% Similarity=0.611 Sum_probs=215.4
Q ss_pred hcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCC-
Q 035861 11 FEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDH- 89 (332)
Q Consensus 11 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~- 89 (332)
.+|.+.+.||.|++|.||+|.+..++..|++|.+....... ...+.+|+.+++.++||||+++++.+....
T Consensus 5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~--------~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~ 76 (342)
T cd07854 5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQS--------VKHALREIKIIRRLDHDNIVKVYEVLGPSGS 76 (342)
T ss_pred cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCch--------HHHHHHHHHHHHhcCCCcchhhHhhhccccc
Confidence 58999999999999999999999999999999986543211 124568999999999999999998764432
Q ss_pred ------------CeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcC-CCcE
Q 035861 90 ------------DSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNN-QGVL 156 (332)
Q Consensus 90 ------------~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~-~~~~ 156 (332)
...++|+||+++++...+. ...+++..++.++.||+.||.|||+.|++|+||+|+||+++. ++.+
T Consensus 77 ~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~--~~~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~~~~~~~ 154 (342)
T cd07854 77 DLTEDVGSLTELNSVYIVQEYMETDLANVLE--QGPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINTEDLVL 154 (342)
T ss_pred ccccccccccccceEEEEeecccccHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCceE
Confidence 3578999999987766554 357999999999999999999999999999999999999985 4578
Q ss_pred EEeecccccccCCCCC---CCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHH
Q 035861 157 KICDFGMSRQYGSPLK---PYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKT 233 (332)
Q Consensus 157 ~l~df~~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~ 233 (332)
+++|||.+........ ......++..|+|||.+.....++.++|+||||+++|+|++|..||...+..+....+...
T Consensus 155 kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~ 234 (342)
T cd07854 155 KIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILES 234 (342)
T ss_pred EECCcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHh
Confidence 9999999875432211 1122356788999998876567889999999999999999999999888877666666554
Q ss_pred cCCCCCCcccCCCC-CccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCC
Q 035861 234 LGTPTETIWPGLSE-LPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEV 312 (332)
Q Consensus 234 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~ 312 (332)
...........+.. .+........... .......+.++.++++||.+||+.||.+||+++++++||||+.+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h~~~~~~ 306 (342)
T cd07854 235 VPVVREEDRNELLNVIPSFVRNDGGEPR--------RPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMHPYMSCY 306 (342)
T ss_pred cCCCChHHhhhhhhhhhhhhhhcccccC--------CCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCCCccccc
Confidence 33222211111000 0000000000000 00001123478899999999999999999999999999999987
Q ss_pred CCCC
Q 035861 313 PLPK 316 (332)
Q Consensus 313 ~~~~ 316 (332)
..+.
T Consensus 307 ~~~~ 310 (342)
T cd07854 307 SCPF 310 (342)
T ss_pred cCCc
Confidence 6654
No 174
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=8.9e-44 Score=313.65 Aligned_cols=308 Identities=36% Similarity=0.642 Sum_probs=228.0
Q ss_pred ccchhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhC-CCCCeeeeeeeE
Q 035861 7 CRSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSF-DHPSIVNVKEVV 85 (332)
Q Consensus 7 ~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~ 85 (332)
....++|++.+.||+|++|.||+|.+..+++.+++|++......... ...+..|+.+++++ +|+||+++++++
T Consensus 3 ~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~------~~~~~~E~~~l~~l~~h~ni~~~~~~~ 76 (337)
T cd07852 3 KHILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATD------AQRTFREIMFLQELGDHPNIVKLLNVI 76 (337)
T ss_pred chhhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchh------hhhhhHHHHHHHHhcCCCCccceeeee
Confidence 34567999999999999999999999988999999988643211111 12345799999999 999999999988
Q ss_pred EcC-CCeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccc
Q 035861 86 MDD-HDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMS 164 (332)
Q Consensus 86 ~~~-~~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~ 164 (332)
... ....++|+|++++++...+.. . .+++..+..++.|++.||+|||+.|++|+||+|+||+++.++.++|+|||.+
T Consensus 77 ~~~~~~~~~lv~e~~~~~L~~~~~~-~-~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill~~~~~~kl~d~g~~ 154 (337)
T cd07852 77 KAENDKDIYLVFEYMETDLHAVIRA-N-ILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLNSDCRVKLADFGLA 154 (337)
T ss_pred ccCCCceEEEEecccccCHHHHHhc-C-CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccch
Confidence 543 356899999999887666654 2 7899999999999999999999999999999999999999999999999988
Q ss_pred cccCCCC-----CCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCC
Q 035861 165 RQYGSPL-----KPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTE 239 (332)
Q Consensus 165 ~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~ 239 (332)
....... .......++..|+|||.+.....++.++|+||||+++|+|++|..||..........++....+.+..
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~ 234 (337)
T cd07852 155 RSLSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSA 234 (337)
T ss_pred hccccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCH
Confidence 7653221 12223457888999998876567889999999999999999999999888777777776665544433
Q ss_pred CcccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCCCCCCC-
Q 035861 240 TIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVPLPKSK- 318 (332)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~~~~- 318 (332)
..+..+... .....................+.++.++.+||.+||+.||++||++.++++||||+++..+...
T Consensus 235 ~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~~~~~~~~~~~~~~ 308 (337)
T cd07852 235 EDIESIKSP------FAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEHPYVAQFHNPSDEP 308 (337)
T ss_pred HHHHHHHhh------hHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhChhhhhhccCCCCC
Confidence 221111000 0000000000000001111223378899999999999999999999999999999998765443
Q ss_pred CCCCCCCCcc
Q 035861 319 DFMPTFPPQH 328 (332)
Q Consensus 319 ~~~~~~~~~~ 328 (332)
....+..|..
T Consensus 309 ~~~~~~~~~~ 318 (337)
T cd07852 309 VLPYPITIPL 318 (337)
T ss_pred CCCCCccCCc
Confidence 2334434443
No 175
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=6.8e-44 Score=308.05 Aligned_cols=262 Identities=26% Similarity=0.466 Sum_probs=212.9
Q ss_pred hhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCC
Q 035861 10 VFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDH 89 (332)
Q Consensus 10 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 89 (332)
.+.|.....||.|++|.||++.+..++..||||.+....... ...+.+|+..++.++|+|++++++.+..+
T Consensus 21 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~--------~~~~~~e~~~l~~l~h~~ii~~~~~~~~~- 91 (292)
T cd06658 21 REYLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQR--------RELLFNEVVIMRDYHHENVVDMYNSYLVG- 91 (292)
T ss_pred HHHHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHH--------HHHHHHHHHHHHhCCCCcHHHHHHheecC-
Confidence 356777888999999999999999899999999886432111 11456899999999999999999998554
Q ss_pred CeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCC
Q 035861 90 DSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGS 169 (332)
Q Consensus 90 ~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~ 169 (332)
...++|+||++++.+..+.. ...+++..+..++.||+.||+|||++|++|+||+|+||+++.++.++|+|||.+.....
T Consensus 92 ~~~~lv~e~~~~~~L~~~~~-~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~ 170 (292)
T cd06658 92 DELWVVMEFLEGGALTDIVT-HTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSK 170 (292)
T ss_pred CeEEEEEeCCCCCcHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEccCcchhhccc
Confidence 78899999999876665554 45689999999999999999999999999999999999999999999999998876543
Q ss_pred CCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCCc
Q 035861 170 PLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELP 249 (332)
Q Consensus 170 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (332)
.........++..|+|||.+.+ ..++.++|+||+|+++|++++|..||...........+........
T Consensus 171 ~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~----------- 238 (292)
T cd06658 171 EVPKRKSLVGTPYWMAPEVISR-LPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDNLPPRV----------- 238 (292)
T ss_pred ccccCceeecCccccCHHHHcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCcc-----------
Confidence 3333344567889999999876 6688999999999999999999999987766554443322211110
Q ss_pred cccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCCCCC
Q 035861 250 GAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVPLPK 316 (332)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~~ 316 (332)
.....++..+.+++.+||..||.+||+++++++||||.....+.
T Consensus 239 -----------------------~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~~~~~~~~ 282 (292)
T cd06658 239 -----------------------KDSHKVSSVLRGFLDLMLVREPSQRATAQELLQHPFLKLAGPPS 282 (292)
T ss_pred -----------------------ccccccCHHHHHHHHHHccCChhHCcCHHHHhhChhhhccCCcc
Confidence 01122678899999999999999999999999999999977666
No 176
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=2e-43 Score=299.55 Aligned_cols=253 Identities=30% Similarity=0.519 Sum_probs=207.5
Q ss_pred hcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCC
Q 035861 11 FEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHD 90 (332)
Q Consensus 11 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 90 (332)
++|++.+.||.|++|.||+|++..++..+++|.+..... ...+.+|+..++.++|+|++++++.+..+ .
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~----------~~~~~~e~~~~~~l~~~~i~~~~~~~~~~-~ 71 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED----------LQEIIKEISILKQCDSPYIVKYYGSYFKN-T 71 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH----------HHHHHHHHHHHHhCCCCcEeeeeeeeecC-C
Confidence 589999999999999999999998899999999865432 12567899999999999999999999555 7
Q ss_pred eEEEEcccccccH-HHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCC
Q 035861 91 SVYMVMEYMEHDL-KWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGS 169 (332)
Q Consensus 91 ~~~lv~e~~~~~l-~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~ 169 (332)
..|+++|+++++. .+.+......+++..+..++.|++.||.+||+.|++|+||+|.||+++.++.++|+|||.+.....
T Consensus 72 ~~~l~~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~ 151 (256)
T cd06612 72 DLWIVMEYCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTD 151 (256)
T ss_pred cEEEEEecCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEECCCCcEEEcccccchhccc
Confidence 8999999999754 444444467789999999999999999999999999999999999999999999999999887654
Q ss_pred CCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCCc
Q 035861 170 PLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELP 249 (332)
Q Consensus 170 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (332)
.........++..|+|||.+.+ ..++.++|+||||+++|+|++|..||...........+...
T Consensus 152 ~~~~~~~~~~~~~y~~PE~~~~-~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~~~~---------------- 214 (256)
T cd06612 152 TMAKRNTVIGTPFWMAPEVIQE-IGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIPNK---------------- 214 (256)
T ss_pred CccccccccCCccccCHHHHhc-CCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhhccC----------------
Confidence 3333344557888999999877 57899999999999999999999999865543322211110
Q ss_pred cccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCC
Q 035861 250 GAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWF 309 (332)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f 309 (332)
.......+..++..+.++|.+||+.||++||++.|+|+||||
T Consensus 215 ------------------~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~~~~~ 256 (256)
T cd06612 215 ------------------PPPTLSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQHPFI 256 (256)
T ss_pred ------------------CCCCCCchhhcCHHHHHHHHHHHhcChhhCcCHHHHhcCCCC
Confidence 000111123367889999999999999999999999999997
No 177
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=1.7e-43 Score=300.02 Aligned_cols=254 Identities=26% Similarity=0.500 Sum_probs=208.7
Q ss_pred cccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCCe
Q 035861 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHDS 91 (332)
Q Consensus 12 ~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 91 (332)
+|++.+.||+|++|++|.++...+++.+++|.+......... ...+.+|+..+++++|+||+++.+.+ .+...
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~------~~~~~~e~~~l~~l~~~~i~~~~~~~-~~~~~ 73 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKE------REESRKEVAVLSNMKHPNIVQYQESF-EENGN 73 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHH------HHHHHHHHHHHHhCCCCCeeeeEeee-cCCCe
Confidence 589999999999999999999999999999998754332211 12467899999999999999999988 45578
Q ss_pred EEEEcccccc-cHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCC
Q 035861 92 VYMVMEYMEH-DLKWLMESMK-QPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGS 169 (332)
Q Consensus 92 ~~lv~e~~~~-~l~~~~~~~~-~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~ 169 (332)
.++|+||+.+ ++.+.+.... ..+++..+..++.|++.||++||++|++|+||+|+||+++.++.++|+|||.+.....
T Consensus 74 ~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~ 153 (256)
T cd08218 74 LYIVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNS 153 (256)
T ss_pred EEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEEeeccceeecCc
Confidence 9999999986 5555554432 3589999999999999999999999999999999999999999999999999876644
Q ss_pred CCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCCc
Q 035861 170 PLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELP 249 (332)
Q Consensus 170 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (332)
.........++..|+|||.+.+ ..++.++|+||||+++|++++|..||......+....+......+
T Consensus 154 ~~~~~~~~~~~~~~~~pe~~~~-~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~------------ 220 (256)
T cd08218 154 TVELARTCIGTPYYLSPEICEN-RPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKIIRGSYPP------------ 220 (256)
T ss_pred chhhhhhccCCccccCHHHhCC-CCCCCccchhHHHHHHHHHHcCCCCccCCCHHHHHHHHhcCCCCC------------
Confidence 3332334457888999999876 668899999999999999999999998777666555543321110
Q ss_pred cccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCC
Q 035861 250 GAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWF 309 (332)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f 309 (332)
.+..++.++.++|.+||+.+|++||++.++++||||
T Consensus 221 ------------------------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~~~~ 256 (256)
T cd08218 221 ------------------------VSSHYSYDLRNLVSQLFKRNPRDRPSVNSILEKNFI 256 (256)
T ss_pred ------------------------CcccCCHHHHHHHHHHhhCChhhCcCHHHHhhCcCC
Confidence 112368889999999999999999999999999998
No 178
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=2.2e-43 Score=335.04 Aligned_cols=270 Identities=27% Similarity=0.418 Sum_probs=213.8
Q ss_pred ccccccchhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeee
Q 035861 3 MLQGCRSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVK 82 (332)
Q Consensus 3 ~~~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~ 82 (332)
...|...+.+|.+++.||.|+||+||++++..++..+|+|++......... ...+..|+.+++++.||||++++
T Consensus 5 ~~~ge~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~------~~~~~~EI~IL~~L~HPNIVrl~ 78 (1021)
T PTZ00266 5 YDDGESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKERE------KSQLVIEVNVMRELKHKNIVRYI 78 (1021)
T ss_pred ccCCccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHH------HHHHHHHHHHHHHcCCCCcCeEE
Confidence 446777889999999999999999999999999999999998754332211 12467899999999999999999
Q ss_pred eeEEcC-CCeEEEEcccccc-cHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHC-------CcccccCCCCCEEE
Q 035861 83 EVVMDD-HDSVYMVMEYMEH-DLKWLMESM---KQPFSTSEVKCLMLQLLEGVKYLHDN-------WVLHRDLKTSNLLL 150 (332)
Q Consensus 83 ~~~~~~-~~~~~lv~e~~~~-~l~~~~~~~---~~~l~~~~~~~i~~~l~~~L~~lh~~-------~i~H~di~p~Nili 150 (332)
+.+... ...+||||||+++ +|...+... ...+++..++.|+.||+.||+|||+. +|+|+||||+||||
T Consensus 79 d~f~de~~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL 158 (1021)
T PTZ00266 79 DRFLNKANQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFL 158 (1021)
T ss_pred EEEEecCCCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEe
Confidence 988543 4678999999986 555544432 36799999999999999999999985 49999999999999
Q ss_pred cC-----------------CCcEEEeecccccccCCCCCCCccccccccccchhhhcC-CCCCCchhHHHHHHHHHHHHH
Q 035861 151 NN-----------------QGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLG-AKKYSTAVDMWSVGCIMAELL 212 (332)
Q Consensus 151 ~~-----------------~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~sDi~slG~~l~~ll 212 (332)
+. .+.++|+|||++....... ......|++.|+|||++.. ...++.++||||||+++|+|+
T Consensus 159 ~s~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s-~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELL 237 (1021)
T PTZ00266 159 STGIRHIGKITAQANNLNGRPIAKIGDFGLSKNIGIES-MAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELC 237 (1021)
T ss_pred ecCccccccccccccccCCCCceEEccCCccccccccc-cccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHH
Confidence 64 2359999999997654322 2234578999999999864 245789999999999999999
Q ss_pred hCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCC
Q 035861 213 AKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTY 292 (332)
Q Consensus 213 tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~ 292 (332)
+|..||................... +.+.++..+.+||..||+.
T Consensus 238 TGk~PF~~~~~~~qli~~lk~~p~l------------------------------------pi~~~S~eL~dLI~~~L~~ 281 (1021)
T PTZ00266 238 SGKTPFHKANNFSQLISELKRGPDL------------------------------------PIKGKSKELNILIKNLLNL 281 (1021)
T ss_pred HCCCCCCcCCcHHHHHHHHhcCCCC------------------------------------CcCCCCHHHHHHHHHHhcC
Confidence 9999998765544333332211000 0122578899999999999
Q ss_pred CCCCCCCHHHHhcCCCCCCCCCC
Q 035861 293 DPEKRITVDDALNHYWFHEVPLP 315 (332)
Q Consensus 293 dp~~Rps~~ell~hp~f~~~~~~ 315 (332)
+|.+||++.++|.|||+..+..+
T Consensus 282 dPeeRPSa~QlL~h~~ik~i~~p 304 (1021)
T PTZ00266 282 SAKERPSALQCLGYQIIKNVGPP 304 (1021)
T ss_pred ChhHCcCHHHHhccHHHhhcCCC
Confidence 99999999999999999987654
No 179
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=1.9e-43 Score=301.40 Aligned_cols=260 Identities=25% Similarity=0.374 Sum_probs=208.2
Q ss_pred hcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCC
Q 035861 11 FEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHD 90 (332)
Q Consensus 11 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 90 (332)
++|++.+.||.|++|+||+|....++..+++|++........ ...+.+|+..++.++|+|++++++.+.. ..
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~-------~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~ 72 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTS-------VDELRKEVQAMSQCNHPNVVKYYTSFVV-GD 72 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchH-------HHHHHHHHHHHHhcCCCCEEEEEEEEee-CC
Confidence 479999999999999999999988899999999865432221 1246789999999999999999998854 47
Q ss_pred eEEEEcccccccHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeeccccccc
Q 035861 91 SVYMVMEYMEHDLKWLMESMK---QPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQY 167 (332)
Q Consensus 91 ~~~lv~e~~~~~l~~~~~~~~---~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~ 167 (332)
..++++|+++|+.+....... ..+++..+..++.|++.||++||+.|++|+||+|+||++++++.++|+|||.+...
T Consensus 73 ~~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~ 152 (267)
T cd06610 73 ELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLGEDGSVKIADFGVSASL 152 (267)
T ss_pred EEEEEEeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEcccchHHHh
Confidence 899999999875544444332 46899999999999999999999999999999999999999999999999998766
Q ss_pred CCCCCC----CccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCccc
Q 035861 168 GSPLKP----YTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWP 243 (332)
Q Consensus 168 ~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (332)
...... .....++..|+|||.+.....++.++|+||||+++|+|++|..||...+......+...........
T Consensus 153 ~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~--- 229 (267)
T cd06610 153 ADGGDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQNDPPSLET--- 229 (267)
T ss_pred ccCccccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhhHHHHhcCCCCCcCC---
Confidence 433222 2334678899999998875578999999999999999999999998766554444433221100000
Q ss_pred CCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCC
Q 035861 244 GLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWF 309 (332)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f 309 (332)
......+++.+.+++.+||..||++||++++|++||||
T Consensus 230 ----------------------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~p~~ 267 (267)
T cd06610 230 ----------------------------GADYKKYSKSFRKMISLCLQKDPSKRPTAEELLKHKFF 267 (267)
T ss_pred ----------------------------ccccccccHHHHHHHHHHcCCChhhCcCHHHHhhCCCC
Confidence 00012378889999999999999999999999999998
No 180
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=2.3e-43 Score=302.66 Aligned_cols=261 Identities=26% Similarity=0.387 Sum_probs=205.0
Q ss_pred ccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCCeEEEEccc
Q 035861 19 ISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHDSVYMVMEY 98 (332)
Q Consensus 19 lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~lv~e~ 98 (332)
||.|+||+||++.+..+++.+++|.+.......... ...+..|+.++++++|||++++++.+. .....|+|+||
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~-----~~~~~~e~~~l~~l~~~~i~~~~~~~~-~~~~~~lv~e~ 74 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKG-----EQMALNEKKILEKVSSRFIVSLAYAFE-TKDDLCLVMTL 74 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhh-----hHHHHHHHHHHHhCCCCCEeeeeeEEe-cCCeEEEEEec
Confidence 689999999999999999999999987543221111 124568999999999999999999884 44789999999
Q ss_pred cccc-HHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCCCCCCCcc
Q 035861 99 MEHD-LKWLMESMK-QPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTS 176 (332)
Q Consensus 99 ~~~~-l~~~~~~~~-~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~~~~~~~~ 176 (332)
++|+ +.+.+.... ..+++..+..++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||.+..... ......
T Consensus 75 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~-~~~~~~ 153 (277)
T cd05577 75 MNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLDDHGNVRISDLGLAVELKG-GKKIKG 153 (277)
T ss_pred CCCCcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEccCcchhhhcc-CCcccc
Confidence 9975 444444422 3689999999999999999999999999999999999999999999999998875432 222234
Q ss_pred ccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCCcccccccc
Q 035861 177 LVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGAKANFA 256 (332)
Q Consensus 177 ~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (332)
..++..|+|||.+.+ ..++.++|+||||+++|++++|..||...........+.....
T Consensus 154 ~~~~~~y~~PE~~~~-~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~--------------------- 211 (277)
T cd05577 154 RAGTPGYMAPEVLQG-EVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTL--------------------- 211 (277)
T ss_pred ccCCCCcCCHHHhcC-CCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhccc---------------------
Confidence 456778999999876 5589999999999999999999999976554222222211100
Q ss_pred CCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCC-----CHHHHhcCCCCCCCCCCCCCCC
Q 035861 257 KQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRI-----TVDDALNHYWFHEVPLPKSKDF 320 (332)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp-----s~~ell~hp~f~~~~~~~~~~~ 320 (332)
......++.+++.+.++|.+||+.+|++|| ++.++++||||.++++......
T Consensus 212 ------------~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~h~~~~~~~~~~~~~~ 268 (277)
T cd05577 212 ------------EMAVEYPDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVREHPLFKDLNWRRLEAG 268 (277)
T ss_pred ------------cccccCCccCCHHHHHHHHHHccCChhHccCCCcccHHHHHhChhhhcCChhhhhcC
Confidence 001112233688999999999999999999 8899999999999998777543
No 181
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=100.00 E-value=8.9e-44 Score=314.18 Aligned_cols=296 Identities=34% Similarity=0.603 Sum_probs=228.0
Q ss_pred chhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcC
Q 035861 9 SVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDD 88 (332)
Q Consensus 9 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 88 (332)
..++|++.+.||.|++|+||+|++..++..||+|++........ ....+.+|+.+++.+.|+|++++.+.+...
T Consensus 13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~------~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 86 (343)
T cd07851 13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAI------HAKRTYRELRLLKHMDHENVIGLLDVFTPA 86 (343)
T ss_pred ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhh------HHHHHHHHHHHHHhccCCCHHHHHHHhhcc
Confidence 45689999999999999999999999999999998864321111 112456799999999999999999877443
Q ss_pred CC-----eEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeeccc
Q 035861 89 HD-----SVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGM 163 (332)
Q Consensus 89 ~~-----~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~ 163 (332)
.. ..++|+|++++++.+.+.. ..+++..++.++.|++.||++||+.|++|+||+|+||+++.++.++|+|||.
T Consensus 87 ~~~~~~~~~~lv~e~~~~~L~~~~~~--~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~~~~~~kL~dfg~ 164 (343)
T cd07851 87 SSLEDFQDVYLVTHLMGADLNNIVKC--QKLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGL 164 (343)
T ss_pred ccccccccEEEEEecCCCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEccccc
Confidence 22 4899999998877666553 5799999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCccc
Q 035861 164 SRQYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWP 243 (332)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (332)
+...... .....++..|+|||.+.+...++.++|+||||+++|++++|..||...+.......+....+.+++..+.
T Consensus 165 ~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 241 (343)
T cd07851 165 ARHTDDE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQ 241 (343)
T ss_pred ccccccc---ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHh
Confidence 8865432 2344677889999998765578899999999999999999999999888877777777766555544333
Q ss_pred CCCCCccccccccCCchhhhhhhCCCC---c-cCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCCCCCCCC
Q 035861 244 GLSELPGAKANFAKQPYNLLRKRFPAA---S-FTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVPLPKSKD 319 (332)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~~~~~ 319 (332)
.+..... .......+.. . ......++..+.+||.+||+.+|++||++.+|++||||.++.-+....
T Consensus 242 ~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h~~~~~~~~~~~~~ 311 (343)
T cd07851 242 KISSESA----------RNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAHPYLAEYHDPEDEP 311 (343)
T ss_pred hccchhH----------HHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcCCCccccCCCcccc
Confidence 3221000 0000000000 0 011123688999999999999999999999999999999988776555
Q ss_pred CCCCCC
Q 035861 320 FMPTFP 325 (332)
Q Consensus 320 ~~~~~~ 325 (332)
..+.+.
T Consensus 312 ~~~~~~ 317 (343)
T cd07851 312 VAPPYD 317 (343)
T ss_pred cccccC
Confidence 444444
No 182
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=3.3e-43 Score=299.26 Aligned_cols=254 Identities=29% Similarity=0.468 Sum_probs=205.1
Q ss_pred ccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCCeEEEEccc
Q 035861 19 ISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHDSVYMVMEY 98 (332)
Q Consensus 19 lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~lv~e~ 98 (332)
||.|++|.||++++..+++.+++|++.......... ...+.+|+..++.++|+||+++++.+. +....++++||
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~-----~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~ 74 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQ-----QEHIFSEKEILEECNHPFIVKLYRTFK-DKKYIYMLMEY 74 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhH-----HHHHHHHHHHHHhCCCCCEeeeeeeEE-cCCccEEEEec
Confidence 699999999999999999999999997654322111 124678999999999999999999884 44789999999
Q ss_pred ccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCCCCCCCcccc
Q 035861 99 MEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLV 178 (332)
Q Consensus 99 ~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~~~~~~~~~~ 178 (332)
++|+.+.........+++..+..++.||+.||++||+.|++|+||+|+||+++.++.++|+|||.+....... ......
T Consensus 75 ~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~-~~~~~~ 153 (262)
T cd05572 75 CLGGELWTILRDRGLFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ-KTWTFC 153 (262)
T ss_pred CCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEcCCCCEEEeeCCcccccCccc-cccccc
Confidence 9875555554446679999999999999999999999999999999999999999999999999988764332 223346
Q ss_pred ccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC--hHHHHHHHHHHcCCCCCCcccCCCCCcccccccc
Q 035861 179 VTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTT--EVDQIDKIFKTLGTPTETIWPGLSELPGAKANFA 256 (332)
Q Consensus 179 ~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (332)
++..|+|||.+.. ..++.++|+||+|+++|++++|..||.... .......+......
T Consensus 154 ~~~~~~~PE~~~~-~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-------------------- 212 (262)
T cd05572 154 GTPEYVAPEIILN-KGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILKGNGK-------------------- 212 (262)
T ss_pred CCcCccChhHhcC-CCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHHhccCCC--------------------
Confidence 7888999999876 568899999999999999999999998766 43333333311100
Q ss_pred CCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCC-----HHHHhcCCCCCCCCCC
Q 035861 257 KQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRIT-----VDDALNHYWFHEVPLP 315 (332)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps-----~~ell~hp~f~~~~~~ 315 (332)
...+...+.++.++|.+||+.+|++||+ ++|+++||||+++.|.
T Consensus 213 ---------------~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~~~ 261 (262)
T cd05572 213 ---------------LEFPNYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKKHKWFNGFDWE 261 (262)
T ss_pred ---------------CCCCcccCHHHHHHHHHHccCChhhCcCCcccCHHHHhcChhhhCCCCC
Confidence 0111224788999999999999999999 9999999999998764
No 183
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=9.9e-44 Score=305.25 Aligned_cols=260 Identities=21% Similarity=0.358 Sum_probs=206.0
Q ss_pred hcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCC
Q 035861 11 FEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHD 90 (332)
Q Consensus 11 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 90 (332)
++|++++.||+|++|.||+|.+..++..||+|++........ ...+.+|+.++++++|||++++++.+... .
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~-------~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-~ 72 (279)
T cd06619 1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVEL-------QKQIMSELEILYKCDSPYIIGFYGAFFVE-N 72 (279)
T ss_pred CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHH-------HHHHHHHHHHHHhCCCCCeeeEEEEEEEC-C
Confidence 378999999999999999999999999999999865422111 12467899999999999999999999554 7
Q ss_pred eEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCCC
Q 035861 91 SVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSP 170 (332)
Q Consensus 91 ~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~~ 170 (332)
..++|+||++++.++.. ..+++..+..++.|++.||+|||+.|++|+||+|+||+++.++.++|+|||.+......
T Consensus 73 ~~~lv~e~~~~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~ 148 (279)
T cd06619 73 RISICTEFMDGGSLDVY----RKIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNS 148 (279)
T ss_pred EEEEEEecCCCCChHHh----hcCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEECCCCCEEEeeCCcceecccc
Confidence 78999999998766543 35789999999999999999999999999999999999999999999999998765332
Q ss_pred CCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH---HHHHHHHcCCCCCCcccCCCC
Q 035861 171 LKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQ---IDKIFKTLGTPTETIWPGLSE 247 (332)
Q Consensus 171 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 247 (332)
......++..|+|||.+.+ ..++.++|+||||+++|+|++|..||........ ...........
T Consensus 149 --~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~---------- 215 (279)
T cd06619 149 --IAKTYVGTNAYMAPERISG-EQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDE---------- 215 (279)
T ss_pred --cccCCCCChhhcCceeecC-CCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhcc----------
Confidence 2234578889999999876 5689999999999999999999999965322110 00111110000
Q ss_pred CccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCCCCC
Q 035861 248 LPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVPLPK 316 (332)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~~ 316 (332)
.........+++++++|+.+||+.+|++||+++++++||||.+.....
T Consensus 216 ---------------------~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~~~~~~~~~~~ 263 (279)
T cd06619 216 ---------------------DPPVLPVGQFSEKFVHFITQCMRKQPKERPAPENLMDHPFIVQYNDGN 263 (279)
T ss_pred ---------------------CCCCCCCCcCCHHHHHHHHHHhhCChhhCCCHHHHhcCcccccccCcc
Confidence 000011223678899999999999999999999999999999875443
No 184
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=4.8e-43 Score=302.86 Aligned_cols=259 Identities=27% Similarity=0.399 Sum_probs=205.0
Q ss_pred chhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhC-CCCCeeeeeeeEEc
Q 035861 9 SVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSF-DHPSIVNVKEVVMD 87 (332)
Q Consensus 9 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~ 87 (332)
..++|++.+.||+|++|.||++....+++.+++|++....... ..+..|+.+++++ +|||++++++++..
T Consensus 20 ~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~~~---------~~~~~e~~~l~~l~~h~ni~~~~~~~~~ 90 (291)
T cd06639 20 PTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISDVD---------EEIEAEYNILQSLPNHPNVVKFYGMFYK 90 (291)
T ss_pred CCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccccHH---------HHHHHHHHHHHHhcCCCCeEEEEEEEEe
Confidence 4568999999999999999999999999999999986432111 1345788888888 89999999999854
Q ss_pred CC----CeEEEEcccccccHHH-HHH---hcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEe
Q 035861 88 DH----DSVYMVMEYMEHDLKW-LME---SMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKIC 159 (332)
Q Consensus 88 ~~----~~~~lv~e~~~~~l~~-~~~---~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~ 159 (332)
.+ ...++|+||++|+.+. .+. .....+++..++.++.|++.||++||+.|++|+||+|+||+++.++.++|+
T Consensus 91 ~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili~~~~~~kl~ 170 (291)
T cd06639 91 ADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLTTEGGVKLV 170 (291)
T ss_pred ccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEe
Confidence 32 4689999999875443 332 234678999999999999999999999999999999999999999999999
Q ss_pred ecccccccCCCCCCCccccccccccchhhhcCCC----CCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcC
Q 035861 160 DFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGAK----KYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLG 235 (332)
Q Consensus 160 df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~----~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~ 235 (332)
|||.+..............++..|+|||.+.... .++.++|+||||+++|+|++|..||...........+.....
T Consensus 171 dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~~~ 250 (291)
T cd06639 171 DFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFKIPRNPP 250 (291)
T ss_pred ecccchhcccccccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHHHHHHhcCCC
Confidence 9999876543332333456788899999986432 368899999999999999999999987665544433322110
Q ss_pred CCCCCcccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCC
Q 035861 236 TPTETIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFH 310 (332)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~ 310 (332)
+ .......++..+.+||.+||+.+|++||++.++++||||+
T Consensus 251 --~--------------------------------~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~ 291 (291)
T cd06639 251 --P--------------------------------TLLHPEKWCRSFNHFISQCLIKDFEARPSVTHLLEHPFIK 291 (291)
T ss_pred --C--------------------------------CCCcccccCHHHHHHHHHHhhcChhhCcCHHHHhcCcccC
Confidence 0 0001122567899999999999999999999999999995
No 185
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=100.00 E-value=3.1e-43 Score=310.64 Aligned_cols=296 Identities=36% Similarity=0.617 Sum_probs=226.4
Q ss_pred chhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcC
Q 035861 9 SVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDD 88 (332)
Q Consensus 9 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 88 (332)
..++|++++.||+|++|+||++.+..++..||||++........ ....+.+|+.+++.++|+||+++++.+..+
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~------~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 86 (343)
T cd07880 13 VPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSEL------FAKRAYRELRLLKHMKHENVIGLLDVFTPD 86 (343)
T ss_pred cccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchH------HHHHHHHHHHHHHhcCCCCccceeeeecCC
Confidence 45689999999999999999999999999999999864321110 112456899999999999999999988544
Q ss_pred C-----CeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeeccc
Q 035861 89 H-----DSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGM 163 (332)
Q Consensus 89 ~-----~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~ 163 (332)
. ..+++|++++++++...+. ...+++..++.++.|++.||+|||+.|++|+||+|+||+++.++.++|+|||.
T Consensus 87 ~~~~~~~~~~lv~e~~~~~l~~~~~--~~~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~~~~~~kl~dfg~ 164 (343)
T cd07880 87 LSLDRFHDFYLVMPFMGTDLGKLMK--HEKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVNEDCELKILDFGL 164 (343)
T ss_pred ccccccceEEEEEecCCCCHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeeccc
Confidence 2 2468999999776655544 45799999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCccc
Q 035861 164 SRQYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWP 243 (332)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (332)
+...... .....++..|+|||.+.+...++.++|+||||+++|++++|..||...+.......+.......+..+..
T Consensus 165 ~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (343)
T cd07880 165 ARQTDSE---MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQ 241 (343)
T ss_pred ccccccC---ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHH
Confidence 8765332 2334568889999998765568899999999999999999999999887776666666654443333222
Q ss_pred CCCCCccccccccCCchhhhhhhCCC----CccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCCCCCCCC
Q 035861 244 GLSELPGAKANFAKQPYNLLRKRFPA----ASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVPLPKSKD 319 (332)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~~~~~ 319 (332)
.+.... ........+. ......+.++..+.++|.+||+.||++||++.++++||||..+...+...
T Consensus 242 ~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~~~~~~~~~~~~~~ 311 (343)
T cd07880 242 KLQSED----------AKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAHPYFEEFHDPEDET 311 (343)
T ss_pred hhcchh----------HHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcCccHhhhcCccccc
Confidence 221100 0000000111 11112345788899999999999999999999999999999987766655
Q ss_pred CCCCCC
Q 035861 320 FMPTFP 325 (332)
Q Consensus 320 ~~~~~~ 325 (332)
..+++.
T Consensus 312 ~~~~~~ 317 (343)
T cd07880 312 EAPPYD 317 (343)
T ss_pred CCCCcc
Confidence 555444
No 186
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=7.7e-43 Score=295.96 Aligned_cols=254 Identities=31% Similarity=0.513 Sum_probs=209.9
Q ss_pred cccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCCe
Q 035861 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHDS 91 (332)
Q Consensus 12 ~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 91 (332)
+|++++.||.|++|.||.++...+++.+++|.+......... ...+.+|+.++++++|+||+++++.+.+. ..
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~------~~~~~~e~~~l~~~~h~~i~~~~~~~~~~-~~ 73 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKE------RRDALNEIVILSLLQHPNIIAYYNHFMDD-NT 73 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhH------HHHHHHHHHHHHhCCCCCeeEEEeEEecC-Ce
Confidence 589999999999999999999999999999998754432221 12456899999999999999999999554 78
Q ss_pred EEEEcccccc-cHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCC
Q 035861 92 VYMVMEYMEH-DLKWLMESM-KQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGS 169 (332)
Q Consensus 92 ~~lv~e~~~~-~l~~~~~~~-~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~ 169 (332)
.++++||++| ++.+.+... ...+++..+..++.|++.+|++||+.|++|+||+|+||+++.++.++|+|||.+.....
T Consensus 74 ~~~~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~ 153 (256)
T cd08221 74 LLIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLTKAGLIKLGDFGISKILGS 153 (256)
T ss_pred EEEEEEecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEEeCCCCEEECcCcceEEccc
Confidence 9999999986 454444443 35689999999999999999999999999999999999999999999999999887644
Q ss_pred CCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCCc
Q 035861 170 PLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELP 249 (332)
Q Consensus 170 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (332)
.........++..|.|||.+.+ ..++.++|+||||+++|+|++|..||...+..+....+......+
T Consensus 154 ~~~~~~~~~~~~~y~ape~~~~-~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~------------ 220 (256)
T cd08221 154 EYSMAETVVGTPYYMSPELCQG-VKYNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQGNYTP------------ 220 (256)
T ss_pred ccccccccCCCccccCHhhcCC-CCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCC------------
Confidence 3333345568899999999876 558899999999999999999999998877666555554321110
Q ss_pred cccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCC
Q 035861 250 GAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWF 309 (332)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f 309 (332)
....++..+.+++.+||+.+|++||+++++|+|||+
T Consensus 221 ------------------------~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~~l 256 (256)
T cd08221 221 ------------------------VVSVYSSELISLVHSLLQQDPEKRPTADEVLDQPLL 256 (256)
T ss_pred ------------------------CccccCHHHHHHHHHHcccCcccCCCHHHHhhCcCC
Confidence 012368889999999999999999999999999996
No 187
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=5.9e-43 Score=298.21 Aligned_cols=259 Identities=26% Similarity=0.415 Sum_probs=205.6
Q ss_pred cccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCCe
Q 035861 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHDS 91 (332)
Q Consensus 12 ~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 91 (332)
+|++.+.||.|+||+||+|.. .+++.+|+|.+.......... ......+.+|++.+++++|+||+++.+.+.+. ..
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~--~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-~~ 76 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLT-NQGQLIAVKQVELDTSNVLAA--EKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDD-NT 76 (265)
T ss_pred CccccceEeccCCeEEEEEEE-cCCCeEEEEEeecCccchhhH--HHHHHHHHHHHHHHHhcCCCCEeeEeeEeecC-Ce
Confidence 588999999999999999987 468899999987543321111 01112467899999999999999999999554 88
Q ss_pred EEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCCC-
Q 035861 92 VYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSP- 170 (332)
Q Consensus 92 ~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~~- 170 (332)
.++++||++|+.+.........+++..+..++.|++.||++||+.|++|+||+|+||+++.++.++|+|||.+......
T Consensus 77 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~ 156 (265)
T cd06631 77 ISIFMEFVPGGSISSILNRFGPLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVG 156 (265)
T ss_pred EEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEECCCCeEEeccchhhHhhhhcc
Confidence 9999999998666665555678999999999999999999999999999999999999999999999999988754211
Q ss_pred -----CCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCC
Q 035861 171 -----LKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGL 245 (332)
Q Consensus 171 -----~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (332)
........++..|+|||.+.+ ..++.++|+||||+++|++++|..||...+.......+.......
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~-------- 227 (265)
T cd06631 157 LHGTHSNMLKSMHGTPYWMAPEVINE-SGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAHRGLM-------- 227 (265)
T ss_pred ccccccccccccCCCccccChhhhcC-CCCcchhhHHHHHHHHHHHHhCCCccccCChHHHHHHhhhccCCC--------
Confidence 111223457888999999876 568899999999999999999999998765444333322211110
Q ss_pred CCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCC
Q 035861 246 SELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWF 309 (332)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f 309 (332)
...+..++.++.++|.+||+.+|++||++.++++||||
T Consensus 228 --------------------------~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~ 265 (265)
T cd06631 228 --------------------------PRLPDSFSAAAIDFVTSCLTRDQHERPSALQLLRHDFL 265 (265)
T ss_pred --------------------------CCCCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence 01123378899999999999999999999999999997
No 188
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00 E-value=4.8e-43 Score=309.41 Aligned_cols=291 Identities=36% Similarity=0.615 Sum_probs=221.5
Q ss_pred hhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCC
Q 035861 10 VFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDH 89 (332)
Q Consensus 10 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 89 (332)
.++|.+.+.||.|++|.||+|.+..+++.||+|++....... .....+.+|+.+++.+.|+||+++++++....
T Consensus 14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~------~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~ 87 (342)
T cd07879 14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSE------IFAKRAYRELTLLKHMQHENVIGLLDVFTSAV 87 (342)
T ss_pred ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccc------cchhHHHHHHHHHHhcCCCCccchhheecccc
Confidence 468999999999999999999999899999999886532111 11224678999999999999999999885432
Q ss_pred -----CeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccc
Q 035861 90 -----DSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMS 164 (332)
Q Consensus 90 -----~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~ 164 (332)
..+++|+|++.+++.... ...+++..+..++.|++.||+|||+.|++|+||+|+||+++.++.++|+|||.+
T Consensus 88 ~~~~~~~~~lv~e~~~~~l~~~~---~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~~~~~~kL~dfg~~ 164 (342)
T cd07879 88 SGDEFQDFYLVMPYMQTDLQKIM---GHPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVNEDCELKILDFGLA 164 (342)
T ss_pred cCCCCceEEEEecccccCHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCCCC
Confidence 347899999987654432 346899999999999999999999999999999999999999999999999998
Q ss_pred cccCCCCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccC
Q 035861 165 RQYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPG 244 (332)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (332)
..... ......++..|+|||.+.+...++.++|+||||+++|+|++|+.||...+.......+....+.+.......
T Consensus 165 ~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (342)
T cd07879 165 RHADA---EMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQK 241 (342)
T ss_pred cCCCC---CCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHH
Confidence 76432 223446688899999987655689999999999999999999999998887777777776655444433322
Q ss_pred CCCCccccccccCCchhhhhhhCCC-CccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCCCCCCCC
Q 035861 245 LSELPGAKANFAKQPYNLLRKRFPA-ASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVPLPKSKD 319 (332)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~~~~~ 319 (332)
+........ .. .....+. ......+..+..+.+||.+||+.||.+||++++++.||||..+...+...
T Consensus 242 ~~~~~~~~~-~~------~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~~~~~~~ 310 (342)
T cd07879 242 LEDKAAKSY-IK------SLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFRDADEET 310 (342)
T ss_pred hcccchHHH-Hh------hcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhcccccccC
Confidence 221110000 00 0000000 00111234678899999999999999999999999999999987544433
No 189
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=1.4e-43 Score=312.63 Aligned_cols=253 Identities=23% Similarity=0.400 Sum_probs=194.7
Q ss_pred hhcccccccccccCcEEEEEEEEC-----CCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhC-CCCCeeeeee
Q 035861 10 VFEFEKLNKISEGTYGIVYRARDK-----KSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSF-DHPSIVNVKE 83 (332)
Q Consensus 10 ~~~y~~~~~lg~g~~g~v~~~~~~-----~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~ 83 (332)
-++|++.+.||.|+||.||+|.+. .++..||+|++........ ...+.+|+.++..+ +||||+++++
T Consensus 6 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~-------~~~~~~E~~~l~~l~~h~niv~~~~ 78 (338)
T cd05102 6 RDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASE-------HKALMSELKILIHIGNHLNVVNLLG 78 (338)
T ss_pred hhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHH-------HHHHHHHHHHHHHhccCcceeeEEe
Confidence 358999999999999999999752 3456899999864322111 12467899999999 8999999999
Q ss_pred eEEcCCCeEEEEccccccc-HHHHHHhc----------------------------------------------------
Q 035861 84 VVMDDHDSVYMVMEYMEHD-LKWLMESM---------------------------------------------------- 110 (332)
Q Consensus 84 ~~~~~~~~~~lv~e~~~~~-l~~~~~~~---------------------------------------------------- 110 (332)
.+.......++||||++|+ +.+.+...
T Consensus 79 ~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (338)
T cd05102 79 ACTKPNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTN 158 (338)
T ss_pred EecCCCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccc
Confidence 8866666789999999864 44444321
Q ss_pred ---------CCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCCCCC--CCccccc
Q 035861 111 ---------KQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLK--PYTSLVV 179 (332)
Q Consensus 111 ---------~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~~~~--~~~~~~~ 179 (332)
...+++..+..++.||+.||+|||++||+|+||||+||+++.++.++|+|||++........ ......+
T Consensus 159 ~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~ 238 (338)
T cd05102 159 PPQETDDLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARL 238 (338)
T ss_pred cchhccccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCC
Confidence 12477888999999999999999999999999999999999999999999999876432211 1123345
Q ss_pred cccccchhhhcCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCCccccccccCC
Q 035861 180 TLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA-KKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGAKANFAKQ 258 (332)
Q Consensus 180 ~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (332)
+..|+|||++.+ ..++.++||||||+++|+|++ |..||.................
T Consensus 239 ~~~y~aPE~~~~-~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~----------------------- 294 (338)
T cd05102 239 PLKWMAPESIFD-KVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKDGT----------------------- 294 (338)
T ss_pred CccccCcHHhhc-CCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhcCC-----------------------
Confidence 678999999876 678999999999999999997 9999977544332222221100
Q ss_pred chhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhc
Q 035861 259 PYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALN 305 (332)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 305 (332)
....+..+++.+.+|+.+||+.||++||++.++++
T Consensus 295 ------------~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~el~~ 329 (338)
T cd05102 295 ------------RMRAPENATPEIYRIMLACWQGDPKERPTFSALVE 329 (338)
T ss_pred ------------CCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 00112236888999999999999999999999985
No 190
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=7.6e-43 Score=300.59 Aligned_cols=260 Identities=28% Similarity=0.492 Sum_probs=209.8
Q ss_pred hcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCC
Q 035861 11 FEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHD 90 (332)
Q Consensus 11 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 90 (332)
..|...+.||.|++|.||++.+..+++.+++|++........ ..+.+|+.+++.+.|+|++.+++.+..+ .
T Consensus 19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~--------~~~~~e~~~l~~~~h~~vv~~~~~~~~~-~ 89 (285)
T cd06648 19 SYLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRR--------ELLFNEVVIMRDYQHPNIVEMYSSYLVG-D 89 (285)
T ss_pred HhhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHH--------HHHHHHHHHHHHcCCCChheEEEEEEcC-C
Confidence 467777899999999999999988899999998864332111 1356899999999999999999988544 7
Q ss_pred eEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCCC
Q 035861 91 SVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSP 170 (332)
Q Consensus 91 ~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~~ 170 (332)
..++++|+++|+.+...... ..+++..+..++.|++.||++||++|++|+||+|+||+++.++.++|+|||.+......
T Consensus 90 ~~~~v~e~~~~~~L~~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~ 168 (285)
T cd06648 90 ELWVVMEFLEGGALTDIVTH-TRMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKE 168 (285)
T ss_pred eEEEEEeccCCCCHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEEcCCCcEEEcccccchhhccC
Confidence 78999999987555554443 67999999999999999999999999999999999999999999999999987654333
Q ss_pred CCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCCcc
Q 035861 171 LKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPG 250 (332)
Q Consensus 171 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (332)
........++..|+|||.+.+ ..++.++|+||||+++|++++|..||...+.......+.......
T Consensus 169 ~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~------------- 234 (285)
T cd06648 169 VPRRKSLVGTPYWMAPEVISR-LPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRDNLPPK------------- 234 (285)
T ss_pred CcccccccCCccccCHHHhcC-CCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHhcCCCC-------------
Confidence 222334568889999999876 568899999999999999999999998766555544433221000
Q ss_pred ccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCCCC
Q 035861 251 AKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVPLP 315 (332)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~ 315 (332)
......++..+.+|+.+||+.+|++||++.++++||||.+...+
T Consensus 235 ---------------------~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~~~ 278 (285)
T cd06648 235 ---------------------LKNLHKVSPRLRSFLDRMLVRDPAQRATAAELLNHPFLAKAGPP 278 (285)
T ss_pred ---------------------CcccccCCHHHHHHHHHHcccChhhCcCHHHHccCcccccCCCc
Confidence 00112267889999999999999999999999999999996643
No 191
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=6.7e-43 Score=297.58 Aligned_cols=255 Identities=29% Similarity=0.481 Sum_probs=207.2
Q ss_pred cccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEc-CCC
Q 035861 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMD-DHD 90 (332)
Q Consensus 12 ~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~ 90 (332)
+|++++.||.|++|.||++.+..++..+++|++......... ...+..|+..+++++|+|++++++.+.. ...
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~------~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 74 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKE------KQQLVSEVNILRELKHPNIVRYYDRIIDRSNQ 74 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHH------HHHHHHHHHHHHhcCCCccceeeeeeecCCCC
Confidence 589999999999999999999999999999998754332211 1245689999999999999999998754 345
Q ss_pred eEEEEcccccc-cHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHH-----HCCcccccCCCCCEEEcCCCcEEEeec
Q 035861 91 SVYMVMEYMEH-DLKWLMESM---KQPFSTSEVKCLMLQLLEGVKYLH-----DNWVLHRDLKTSNLLLNNQGVLKICDF 161 (332)
Q Consensus 91 ~~~lv~e~~~~-~l~~~~~~~---~~~l~~~~~~~i~~~l~~~L~~lh-----~~~i~H~di~p~Nili~~~~~~~l~df 161 (332)
..++++||+++ ++.+.+... ...+++..++.++.||+.||++|| +.+++|+||+|+||+++.++.++|+||
T Consensus 75 ~~~~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~ 154 (265)
T cd08217 75 TLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDF 154 (265)
T ss_pred EEEEEehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEecc
Confidence 68999999986 444444432 467999999999999999999999 889999999999999999999999999
Q ss_pred ccccccCCCCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCc
Q 035861 162 GMSRQYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETI 241 (332)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 241 (332)
|.+..............++..|+|||.+.+ ..++.++|+||||+++|+|++|..||...+.......+.....
T Consensus 155 g~~~~~~~~~~~~~~~~~~~~~~~pE~~~~-~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~------ 227 (265)
T cd08217 155 GLAKILGHDSSFAKTYVGTPYYMSPEQLNH-MSYDEKSDIWSLGCLIYELCALSPPFTARNQLQLASKIKEGKF------ 227 (265)
T ss_pred cccccccCCcccccccccCCCccChhhhcC-CCCCchhHHHHHHHHHHHHHHCCCcccCcCHHHHHHHHhcCCC------
Confidence 998876543332344568889999999877 5688999999999999999999999988765444333322110
Q ss_pred ccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCC
Q 035861 242 WPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWF 309 (332)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f 309 (332)
...+..++..+.+++.+||+.+|++||++++|++|||+
T Consensus 228 ------------------------------~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~~~~ 265 (265)
T cd08217 228 ------------------------------RRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQLPLI 265 (265)
T ss_pred ------------------------------CCCccccCHHHHHHHHHHccCCcccCCCHHHHhhCCCC
Confidence 01122367889999999999999999999999999996
No 192
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=4.1e-43 Score=300.59 Aligned_cols=257 Identities=28% Similarity=0.449 Sum_probs=205.9
Q ss_pred hhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhC-CCCCeeeeeeeEEcC
Q 035861 10 VFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSF-DHPSIVNVKEVVMDD 88 (332)
Q Consensus 10 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~ 88 (332)
.++|++.+.||.|++|+||+|.+..+++.+++|++....... ..+.+|+.+++++ .|+||+++++.+...
T Consensus 5 ~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~---------~~~~~e~~~l~~~~~h~~i~~~~~~~~~~ 75 (275)
T cd06608 5 TGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDEE---------EEIKEEYNILRKYSNHPNIATFYGAFIKK 75 (275)
T ss_pred hhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCchhH---------HHHHHHHHHHHHhcCCCChheEEEEEEec
Confidence 478999999999999999999999889999999987543211 1456899999998 799999999998543
Q ss_pred -----CCeEEEEcccccccHHHHHH-h---cCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEe
Q 035861 89 -----HDSVYMVMEYMEHDLKWLME-S---MKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKIC 159 (332)
Q Consensus 89 -----~~~~~lv~e~~~~~l~~~~~-~---~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~ 159 (332)
....++||||++++.+..+. . .+..+++..++.++.|++.||+|||+.|++|+||+|+||+++.++.++|+
T Consensus 76 ~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~~~~~~~~l~ 155 (275)
T cd06608 76 NPPGNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLTKNAEVKLV 155 (275)
T ss_pred CCCCcceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEccCCeEEEC
Confidence 24589999999975444332 2 24679999999999999999999999999999999999999999999999
Q ss_pred ecccccccCCCCCCCccccccccccchhhhcCC----CCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcC
Q 035861 160 DFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGA----KKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLG 235 (332)
Q Consensus 160 df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~----~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~ 235 (332)
|||.+..............++..|+|||.+... ..++.++|+||||+++|++++|..||...........+.....
T Consensus 156 d~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~ 235 (275)
T cd06608 156 DFGVSAQLDSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRALFKIPRNPP 235 (275)
T ss_pred CCccceecccchhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHHHHHhhccCC
Confidence 999987654443444456688899999987532 3467899999999999999999999976655444433322110
Q ss_pred CCCCCcccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCC
Q 035861 236 TPTETIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWF 309 (332)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f 309 (332)
. .......++..+++||.+||..||++|||++++++|||+
T Consensus 236 ---~-------------------------------~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~~~~ 275 (275)
T cd06608 236 ---P-------------------------------TLKSPENWSKKFNDFISECLIKNYEQRPFMEELLEHPFI 275 (275)
T ss_pred ---C-------------------------------CCCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhcCCCC
Confidence 0 001112267889999999999999999999999999996
No 193
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=6.7e-43 Score=298.07 Aligned_cols=260 Identities=26% Similarity=0.414 Sum_probs=203.8
Q ss_pred hcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcC-C
Q 035861 11 FEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDD-H 89 (332)
Q Consensus 11 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-~ 89 (332)
.+|++.+.||+|++|.||++.+..++..|++|++........... ....+.+|+.+++.++|+||+++++.+... .
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 78 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSK---EVSALECEIQLLKNLQHERIVQYYGCLRDRAE 78 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHH---HHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCC
Confidence 479999999999999999999999999999999875443221110 012456899999999999999999987543 4
Q ss_pred CeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCC
Q 035861 90 DSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGS 169 (332)
Q Consensus 90 ~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~ 169 (332)
...++++|+++++.+.......+.+++...+.++.|++.||++||+.|++|+||+|+||+++.++.++|+|||.+.....
T Consensus 79 ~~~~l~~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~ 158 (266)
T cd06651 79 KTLTIFMEYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQT 158 (266)
T ss_pred CEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCCCcccccc
Confidence 67889999998754444444466799999999999999999999999999999999999999999999999998875432
Q ss_pred CC---CCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCC
Q 035861 170 PL---KPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLS 246 (332)
Q Consensus 170 ~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (332)
.. .......++..|+|||.+.+ ..++.++|+||+|+++|++++|..||................ ..
T Consensus 159 ~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~~~~~~~~~---~~------- 227 (266)
T cd06651 159 ICMSGTGIRSVTGTPYWMSPEVISG-EGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFKIATQP---TN------- 227 (266)
T ss_pred ccccCCccccCCccccccCHHHhCC-CCCCchhhhHHHHHHHHHHHHCCCCccccchHHHHHHHhcCC---CC-------
Confidence 11 11223457888999999876 678999999999999999999999998765444333222110 00
Q ss_pred CCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCC
Q 035861 247 ELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFH 310 (332)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~ 310 (332)
...+..+++.+++++ +||..+|++||+++||++||||+
T Consensus 228 -------------------------~~~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~hp~~~ 265 (266)
T cd06651 228 -------------------------PQLPSHISEHARDFL-GCIFVEARHRPSAEELLRHPFAQ 265 (266)
T ss_pred -------------------------CCCchhcCHHHHHHH-HHhcCChhhCcCHHHHhcCcccc
Confidence 011123677888999 67778999999999999999996
No 194
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=8e-43 Score=303.68 Aligned_cols=260 Identities=27% Similarity=0.464 Sum_probs=211.9
Q ss_pred chhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcC
Q 035861 9 SVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDD 88 (332)
Q Consensus 9 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 88 (332)
-...|++.+.||+|++|+||+|+...+++.|++|++.......... ...+.+|+.+++.++|||++++.+.+..+
T Consensus 13 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~-----~~~~~~Ei~~l~~l~h~niv~~~~~~~~~ 87 (307)
T cd06607 13 PEKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEK-----WQDIIKEVRFLQQLRHPNTIEYKGCYLRE 87 (307)
T ss_pred cchhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHH-----HHHHHHHHHHHHhCCCCCEEEEEEEEEeC
Confidence 3457999999999999999999999889999999986443222111 12467899999999999999999998554
Q ss_pred CCeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccC
Q 035861 89 HDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYG 168 (332)
Q Consensus 89 ~~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~ 168 (332)
...++|+||+.|++.+.+......+++..+..++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||.+....
T Consensus 88 -~~~~lv~e~~~g~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~ 166 (307)
T cd06607 88 -HTAWLVMEYCLGSASDILEVHKKPLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILLTEPGTVKLADFGSASLVS 166 (307)
T ss_pred -CeEEEEHHhhCCCHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEECCCCCEEEeecCcceecC
Confidence 7789999999999888877666789999999999999999999999999999999999999999999999999887643
Q ss_pred CCCCCCccccccccccchhhhcC--CCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCC
Q 035861 169 SPLKPYTSLVVTLWYRAPELLLG--AKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLS 246 (332)
Q Consensus 169 ~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (332)
.. ....++..|+|||.+.+ ...++.++|+||||+++|++++|..||...+.......+..... +.
T Consensus 167 ~~----~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~--~~------- 233 (307)
T cd06607 167 PA----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDS--PT------- 233 (307)
T ss_pred CC----CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHHHHhcCCC--CC-------
Confidence 22 34467788999998742 35688899999999999999999999987765554333321100 00
Q ss_pred CCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCC
Q 035861 247 ELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVP 313 (332)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~ 313 (332)
.....++..++++|.+||+.+|++||++.+++.||||..-.
T Consensus 234 --------------------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~ 274 (307)
T cd06607 234 --------------------------LSSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKHRFVLRER 274 (307)
T ss_pred --------------------------CCchhhCHHHHHHHHHHhcCChhhCcCHHHHhcChhhcccC
Confidence 00112577899999999999999999999999999998744
No 195
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=4.7e-43 Score=301.57 Aligned_cols=256 Identities=24% Similarity=0.398 Sum_probs=202.7
Q ss_pred hhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhC-CCCCeeeeeeeEEc-
Q 035861 10 VFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSF-DHPSIVNVKEVVMD- 87 (332)
Q Consensus 10 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~- 87 (332)
.+.|++.+.||.|+||.||+|.+..+++.+++|++....... ..+..|+..++++ .|+|++++++.+..
T Consensus 15 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~~~~---------~~~~~e~~~l~~~~~h~~i~~~~~~~~~~ 85 (282)
T cd06636 15 AGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEE---------EEIKLEINMLKKYSHHRNIATYYGAFIKK 85 (282)
T ss_pred hhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecChHHH---------HHHHHHHHHHHHhcCCCcEEEEeeehhcc
Confidence 358999999999999999999999999999999986542211 1345788888888 79999999999853
Q ss_pred ----CCCeEEEEccccccc-HHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeec
Q 035861 88 ----DHDSVYMVMEYMEHD-LKWLMESM-KQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDF 161 (332)
Q Consensus 88 ----~~~~~~lv~e~~~~~-l~~~~~~~-~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df 161 (332)
.....+++|||++++ +.+.+... ...+++..++.++.||+.||+|||+.|++|+||+|+||+++.++.++|+||
T Consensus 86 ~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili~~~~~~~l~df 165 (282)
T cd06636 86 SPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTENAEVKLVDF 165 (282)
T ss_pred cccCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeC
Confidence 246789999999874 44444332 345889999999999999999999999999999999999999999999999
Q ss_pred ccccccCCCCCCCccccccccccchhhhcC----CCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCC
Q 035861 162 GMSRQYGSPLKPYTSLVVTLWYRAPELLLG----AKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTP 237 (332)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~----~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~ 237 (332)
|.+..............++..|+|||.+.. ...++.++|+||||+++|+|++|..||...........+....
T Consensus 166 g~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~--- 242 (282)
T cd06636 166 GVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNP--- 242 (282)
T ss_pred cchhhhhccccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhhhHhhCC---
Confidence 998765433333345568889999998753 2457889999999999999999999997655433322211110
Q ss_pred CCCcccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCC
Q 035861 238 TETIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWF 309 (332)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f 309 (332)
........++..+.+||.+||+.||.+||++.|||+||||
T Consensus 243 --------------------------------~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~~~~ 282 (282)
T cd06636 243 --------------------------------PPKLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLKHPFI 282 (282)
T ss_pred --------------------------------CCCCcccccCHHHHHHHHHHhCCChhhCcCHHHHhcCCCC
Confidence 0001112378899999999999999999999999999997
No 196
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=5.6e-43 Score=300.31 Aligned_cols=258 Identities=26% Similarity=0.439 Sum_probs=208.4
Q ss_pred hcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCC
Q 035861 11 FEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHD 90 (332)
Q Consensus 11 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 90 (332)
..|+.++.||.|++|.||+|.+..++..+|+|++........ ...+.+|+..++++.|+|++++++.+.++ .
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~-------~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-~ 75 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDE-------IEDIQQEITVLSQCDSPYVTKYYGSYLKG-T 75 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHH-------HHHHHHHHHHHHhCCCCCEeeEEEEEEEC-C
Confidence 468899999999999999999998899999999875432111 12466899999999999999999998554 7
Q ss_pred eEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCCC
Q 035861 91 SVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSP 170 (332)
Q Consensus 91 ~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~~ 170 (332)
..++||||++|+.+..... .+++++..+..++.|++.||++||+.+++|+||+|+||+++.++.++++|||.+......
T Consensus 76 ~~~lv~e~~~~~~L~~~i~-~~~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~ 154 (277)
T cd06640 76 KLWIIMEYLGGGSALDLLR-AGPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDT 154 (277)
T ss_pred EEEEEEecCCCCcHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEEcCCCCEEEcccccceeccCC
Confidence 8999999998755444444 457899999999999999999999999999999999999999999999999998765433
Q ss_pred CCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCCcc
Q 035861 171 LKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPG 250 (332)
Q Consensus 171 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (332)
........++..|+|||.+.+ ...+.++|+||||+++|+|++|..||...........+.... +
T Consensus 155 ~~~~~~~~~~~~y~apE~~~~-~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~--~------------- 218 (277)
T cd06640 155 QIKRNTFVGTPFWMAPEVIQQ-SAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNN--P------------- 218 (277)
T ss_pred ccccccccCcccccCHhHhcc-CCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhhhhhcCC--C-------------
Confidence 323334467888999999876 568999999999999999999999997665443332221100 0
Q ss_pred ccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCCC
Q 035861 251 AKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVPL 314 (332)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~ 314 (332)
......++..+.+++.+||+.+|++||+++++++||||.+...
T Consensus 219 ---------------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~ 261 (277)
T cd06640 219 ---------------------PTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKHKFIVKNAK 261 (277)
T ss_pred ---------------------CCCchhhhHHHHHHHHHHcccCcccCcCHHHHHhChHhhhcch
Confidence 0011225778899999999999999999999999999988654
No 197
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=5.1e-43 Score=303.35 Aligned_cols=260 Identities=27% Similarity=0.483 Sum_probs=210.7
Q ss_pred hcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCC
Q 035861 11 FEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHD 90 (332)
Q Consensus 11 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 90 (332)
..|.....||.|+||.||++.+..++..||+|.+....... ...+.+|+..++.+.|||++++++.+..+ .
T Consensus 21 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~--------~~~~~~e~~~l~~l~hp~i~~~~~~~~~~-~ 91 (297)
T cd06659 21 SLLENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQR--------RELLFNEVVIMRDYQHQNVVEMYKSYLVG-E 91 (297)
T ss_pred hhHHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccch--------HHHHHHHHHHHHhCCCCchhhhhhheeeC-C
Confidence 45667778999999999999999899999999986533211 12456899999999999999999998554 7
Q ss_pred eEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCCC
Q 035861 91 SVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSP 170 (332)
Q Consensus 91 ~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~~ 170 (332)
..++++||++++.+..+.. ...+++..++.++.|++.||++||+.|++|+||+|+||+++.++.++|+|||.+......
T Consensus 92 ~~~iv~e~~~~~~L~~~~~-~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~ 170 (297)
T cd06659 92 ELWVLMEFLQGGALTDIVS-QTRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKD 170 (297)
T ss_pred eEEEEEecCCCCCHHHHHh-hcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEEccCCcEEEeechhHhhcccc
Confidence 8999999999766555554 457899999999999999999999999999999999999999999999999998765433
Q ss_pred CCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCCcc
Q 035861 171 LKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPG 250 (332)
Q Consensus 171 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (332)
........++..|+|||.+.+ ..++.++|+||||+++|+|++|..||...........+.... . .
T Consensus 171 ~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~---~-~---------- 235 (297)
T cd06659 171 VPKRKSLVGTPYWMAPEVISR-TPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSP---P-P---------- 235 (297)
T ss_pred cccccceecCccccCHHHHcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhccC---C-C----------
Confidence 333344568889999999976 568999999999999999999999998766554443332110 0 0
Q ss_pred ccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCCCC
Q 035861 251 AKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVPLP 315 (332)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~ 315 (332)
.......++..+.++|.+||+.+|++||+++++++||||.+...+
T Consensus 236 --------------------~~~~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~~~~~~~~~~ 280 (297)
T cd06659 236 --------------------KLKNAHKISPVLRDFLERMLTREPQERATAQELLDHPFLLQTGLP 280 (297)
T ss_pred --------------------CccccCCCCHHHHHHHHHHhcCCcccCcCHHHHhhChhhccCCCc
Confidence 001112367889999999999999999999999999999987653
No 198
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00 E-value=6e-43 Score=297.34 Aligned_cols=255 Identities=29% Similarity=0.423 Sum_probs=200.8
Q ss_pred ccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHH-HhhCCCCCeeeeeeeEEcCCCeEEEE
Q 035861 17 NKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINI-LLSFDHPSIVNVKEVVMDDHDSVYMV 95 (332)
Q Consensus 17 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~-l~~l~h~~i~~~~~~~~~~~~~~~lv 95 (332)
+.||.|++|.||+|.+..+++.||+|++........... ..+..|... .....|+|++++++.+.. ....++|
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~-----~~~~~e~~~~~~~~~~~~i~~~~~~~~~-~~~~~lv 75 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQV-----TNVKAERAIMMIQGESPYVAKLYYSFQS-KDYLYLV 75 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHH-----HHHHHHHHHHhhcCCCCCeeeeeeeEEc-CCeEEEE
Confidence 579999999999999998999999999865432111110 012334443 345589999999999854 4789999
Q ss_pred cccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCCCCCCCc
Q 035861 96 MEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYT 175 (332)
Q Consensus 96 ~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~~~~~~~ 175 (332)
+||++|+.+..+....+.+++..+..++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||.+..... ..
T Consensus 76 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~----~~ 151 (260)
T cd05611 76 MEYLNGGDCASLIKTLGGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE----NK 151 (260)
T ss_pred EeccCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEeecccceeccc----cc
Confidence 99999866565555567899999999999999999999999999999999999999999999999998875432 23
Q ss_pred cccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCCccccccc
Q 035861 176 SLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGAKANF 255 (332)
Q Consensus 176 ~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (332)
...++..|+|||.+.+ ..++.++|+||||+++|++++|..||...+.......+.......+
T Consensus 152 ~~~~~~~y~~pe~~~~-~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~----------------- 213 (260)
T cd05611 152 KFVGTPDYLAPETILG-VGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSRRINWP----------------- 213 (260)
T ss_pred cCCCCcCccChhhhcC-CCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccCCC-----------------
Confidence 3457788999999877 4589999999999999999999999987776655544432211000
Q ss_pred cCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCC---CHHHHhcCCCCCCCCCC
Q 035861 256 AKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRI---TVDDALNHYWFHEVPLP 315 (332)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp---s~~ell~hp~f~~~~~~ 315 (332)
......++..+.++|.+||+.+|++|| +++|+++||||.+++|.
T Consensus 214 ----------------~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~~~~~~~~~~~ 260 (260)
T cd05611 214 ----------------EEVKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIKSHPFFKSINWD 260 (260)
T ss_pred ----------------CcccccCCHHHHHHHHHHccCCHHHccCCCcHHHHHcChHhhcCCCC
Confidence 011123788999999999999999999 55799999999998763
No 199
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=7.7e-43 Score=300.81 Aligned_cols=258 Identities=28% Similarity=0.423 Sum_probs=202.9
Q ss_pred chhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhC-CCCCeeeeeeeEEc
Q 035861 9 SVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSF-DHPSIVNVKEVVMD 87 (332)
Q Consensus 9 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~ 87 (332)
..++|++.+.||+|++|.||++.+..+++.+++|++....... ..+..|+.+++.+ +|+|++++++.+..
T Consensus 16 ~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~---------~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 86 (286)
T cd06638 16 PSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDID---------EEIEAEYNILKALSDHPNVVKFYGMYYK 86 (286)
T ss_pred cccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccccchH---------HHHHHHHHHHHHHhcCCCeeeeeeeeee
Confidence 4569999999999999999999999999999999875432111 1355788999898 79999999998742
Q ss_pred ----CCCeEEEEcccccccHHH-HHH---hcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEe
Q 035861 88 ----DHDSVYMVMEYMEHDLKW-LME---SMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKIC 159 (332)
Q Consensus 88 ----~~~~~~lv~e~~~~~l~~-~~~---~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~ 159 (332)
+....++||||++|+.+. .+. .....+++..++.++.|++.||.|||+.+++|+||+|+||+++.++.++|+
T Consensus 87 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~kl~ 166 (286)
T cd06638 87 KDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLTTEGGVKLV 166 (286)
T ss_pred cccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEECCCCCEEEc
Confidence 346789999999875443 332 234568999999999999999999999999999999999999999999999
Q ss_pred ecccccccCCCCCCCccccccccccchhhhcC----CCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcC
Q 035861 160 DFGMSRQYGSPLKPYTSLVVTLWYRAPELLLG----AKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLG 235 (332)
Q Consensus 160 df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~----~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~ 235 (332)
|||.+..............++..|+|||.+.. ...++.++|+||+|+++|+|++|..||...............
T Consensus 167 dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~-- 244 (286)
T cd06638 167 DFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRALFKIPRN-- 244 (286)
T ss_pred cCCceeecccCCCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHHhhcccc--
Confidence 99998765443333344568899999998853 244788999999999999999999999776543322221110
Q ss_pred CCCCCcccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCC
Q 035861 236 TPTETIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWF 309 (332)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f 309 (332)
.. .....+..++..+.+||.+||+.||++||++.||++|+||
T Consensus 245 ~~--------------------------------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~~~ 286 (286)
T cd06638 245 PP--------------------------------PTLHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHVFI 286 (286)
T ss_pred CC--------------------------------CcccCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhcccC
Confidence 00 0011112257789999999999999999999999999997
No 200
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=5e-43 Score=302.01 Aligned_cols=263 Identities=24% Similarity=0.407 Sum_probs=208.4
Q ss_pred hcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCC
Q 035861 11 FEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHD 90 (332)
Q Consensus 11 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 90 (332)
++|++++.||+|++|.||++.+..++..+|+|.+....... . ...+.+|+..+++++|+||+++++.+.. ..
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~-~------~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~ 72 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDES-K------FNQIIMELDILHKAVSPYIVDFYGAFFI-EG 72 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHH-H------HHHHHHHHHHHHhcCCCcHHhhhhheec-CC
Confidence 47999999999999999999999999999999886432111 0 1246789999999999999999998855 47
Q ss_pred eEEEEcccccccHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHH-CCcccccCCCCCEEEcCCCcEEEeecccccc
Q 035861 91 SVYMVMEYMEHDLKWLMESM---KQPFSTSEVKCLMLQLLEGVKYLHD-NWVLHRDLKTSNLLLNNQGVLKICDFGMSRQ 166 (332)
Q Consensus 91 ~~~lv~e~~~~~l~~~~~~~---~~~l~~~~~~~i~~~l~~~L~~lh~-~~i~H~di~p~Nili~~~~~~~l~df~~~~~ 166 (332)
..++|+||++|+.+..+... ...+++..+..++.|++.||.|||+ .|++|+||+|+||+++.++.++|+|||.+..
T Consensus 73 ~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~ 152 (286)
T cd06622 73 AVYMCMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGN 152 (286)
T ss_pred eEEEEEeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECCCCCEEEeecCCccc
Confidence 89999999998655555443 2378999999999999999999996 6999999999999999999999999999876
Q ss_pred cCCCCCCCccccccccccchhhhcCCC-----CCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCc
Q 035861 167 YGSPLKPYTSLVVTLWYRAPELLLGAK-----KYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETI 241 (332)
Q Consensus 167 ~~~~~~~~~~~~~~~~y~aPE~~~~~~-----~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 241 (332)
.... ......++..|+|||.+.+.. .++.++|+||||+++|++++|..||...........+.......+
T Consensus 153 ~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~--- 227 (286)
T cd06622 153 LVAS--LAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAIVDGDP--- 227 (286)
T ss_pred ccCC--ccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHHHHHHhhcCC---
Confidence 5322 223345778899999985422 358899999999999999999999976544333333222111111
Q ss_pred ccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCCCCC
Q 035861 242 WPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVPLPK 316 (332)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~~ 316 (332)
...++.++.++.+||.+||+.+|++||++++++.||||......+
T Consensus 228 ------------------------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~~~~~~~~~~~ 272 (286)
T cd06622 228 ------------------------------PTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEHPWLVKYKNAD 272 (286)
T ss_pred ------------------------------CCCCcccCHHHHHHHHHHcccCcccCCCHHHHhcChhhhhccCCc
Confidence 111223788999999999999999999999999999999877553
No 201
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=100.00 E-value=1.6e-42 Score=304.05 Aligned_cols=292 Identities=34% Similarity=0.609 Sum_probs=223.6
Q ss_pred hhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCC
Q 035861 10 VFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDH 89 (332)
Q Consensus 10 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 89 (332)
-++|++.+.||.|++|.||++.+..+++.||+|++....... .....+..|+.+++.++|||++++.+.+....
T Consensus 9 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~------~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~ 82 (328)
T cd07856 9 TNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTP------VLAKRTYRELKLLKHLRHENIISLSDIFISPL 82 (328)
T ss_pred ccceEEEEeecccCCeEEEEEEECCCCCEEEEEEeccccccc------chhHHHHHHHHHHHhcCCCCeeeEeeeEecCC
Confidence 458999999999999999999999999999999886432211 11124568999999999999999999987666
Q ss_pred CeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCC
Q 035861 90 DSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGS 169 (332)
Q Consensus 90 ~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~ 169 (332)
...++++|++++++...+. ...+++..+..++.|++.||++||+.|++|+||+|.||+++.++.++|+|||.+.....
T Consensus 83 ~~~~lv~e~~~~~L~~~~~--~~~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~~ 160 (328)
T cd07856 83 EDIYFVTELLGTDLHRLLT--SRPLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILINENCDLKICDFGLARIQDP 160 (328)
T ss_pred CcEEEEeehhccCHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeECCCCCEEeCccccccccCC
Confidence 7789999999887655543 45688999999999999999999999999999999999999999999999998875432
Q ss_pred CCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCCc
Q 035861 170 PLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELP 249 (332)
Q Consensus 170 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (332)
. .....++..|+|||.+.+...++.++|+||||+++|++++|..||...........+.+..+.+++.+...+....
T Consensus 161 ~---~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (328)
T cd07856 161 Q---MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSEN 237 (328)
T ss_pred C---cCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchh
Confidence 2 2334567889999988765678999999999999999999999998877766666666665555544332221100
Q ss_pred cccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCCCCCCC
Q 035861 250 GAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVPLPKSK 318 (332)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~~~~ 318 (332)
.... ........+.......+.++..+.++|.+||+.+|++||++++++.||||..+..+..+
T Consensus 238 ~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~~~~~~~~~~~~~ 300 (328)
T cd07856 238 TLRF------VQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAHPYLAPYHDPTDE 300 (328)
T ss_pred hHHH------HhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCCccccccCCccc
Confidence 0000 00000000000001123468899999999999999999999999999999988877554
No 202
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=100.00 E-value=1.2e-42 Score=307.09 Aligned_cols=295 Identities=34% Similarity=0.580 Sum_probs=224.8
Q ss_pred hhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCC
Q 035861 10 VFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDH 89 (332)
Q Consensus 10 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 89 (332)
.++|++.+.||+|++|.||++.+..+++.||+|++......... ...+.+|+.++++++|+||+++++.+....
T Consensus 16 ~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~------~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~ 89 (345)
T cd07877 16 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH------AKRTYRELRLLKHMKHENVIGLLDVFTPAR 89 (345)
T ss_pred cCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHH------HHHHHHHHHHHHHcCCCcccceeeeeeecc
Confidence 46899999999999999999999989999999988653221110 124568999999999999999999874322
Q ss_pred -----CeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccc
Q 035861 90 -----DSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMS 164 (332)
Q Consensus 90 -----~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~ 164 (332)
...|++++++++++.+.+. ...+++..++.++.|++.||+|||+.|++|+||+|+||+++.++.++|+|||.+
T Consensus 90 ~~~~~~~~~lv~~~~~~~L~~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~dfg~~ 167 (345)
T cd07877 90 SLEEFNDVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 167 (345)
T ss_pred cccccccEEEEehhcccCHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEcCCCCEEEeccccc
Confidence 3478999998777755443 346999999999999999999999999999999999999999999999999998
Q ss_pred cccCCCCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccC
Q 035861 165 RQYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPG 244 (332)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (332)
..... ......++..|+|||.+.+...++.++|+||||+++|++++|..||...+.......+....+.++......
T Consensus 168 ~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (345)
T cd07877 168 RHTDD---EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 244 (345)
T ss_pred ccccc---cccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHhh
Confidence 76432 223446788899999987656688999999999999999999999988877777777776665555544433
Q ss_pred CCCCccccccccCCchhhhhhhCCCCcc-CCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCCCCCCCCCCC
Q 035861 245 LSELPGAKANFAKQPYNLLRKRFPAASF-TGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVPLPKSKDFMP 322 (332)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~~~~~~~~ 322 (332)
+....... +.......+.... ......++.+++||.+||+.||.+||++.++++||||+++..+.......
T Consensus 245 ~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~f~~~~~~~~~~~~~ 316 (345)
T cd07877 245 ISSESARN-------YIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVAD 316 (345)
T ss_pred cccHhHHH-------HHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcChhhhhcCCCCccccCC
Confidence 32211000 0000000011110 11123688899999999999999999999999999999988776655433
No 203
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=8e-43 Score=299.35 Aligned_cols=260 Identities=25% Similarity=0.488 Sum_probs=208.3
Q ss_pred cccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCC---CCCeeeeeeeEEcC
Q 035861 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFD---HPSIVNVKEVVMDD 88 (332)
Q Consensus 12 ~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~---h~~i~~~~~~~~~~ 88 (332)
.|++.+.||.|++|.||+|.+..+++.+++|.+......... ..+.+|+.+++++. |||++++++.+..
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~-------~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~- 73 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDV-------SDIQREVALLSQLRQSQPPNITKYYGSYLK- 73 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhH-------HHHHHHHHHHHHhccCCCCCeeeEeeeeee-
Confidence 588999999999999999999999999999998654322111 13557888888886 9999999998854
Q ss_pred CCeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccC
Q 035861 89 HDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYG 168 (332)
Q Consensus 89 ~~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~ 168 (332)
....++||||++|+.+..... ...+++..++.++.|++.||++||+.|++|+||+|+||+++.++.++|+|||.+....
T Consensus 74 ~~~~~lv~e~~~~~~L~~~~~-~~~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~ 152 (277)
T cd06917 74 GPRLWIIMEYAEGGSVRTLMK-AGPIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVTNTGNVKLCDFGVAALLN 152 (277)
T ss_pred CCEEEEEEecCCCCcHHHHHH-ccCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEcCCCCEEEccCCceeecC
Confidence 478999999998865555544 3479999999999999999999999999999999999999999999999999988765
Q ss_pred CCCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCC
Q 035861 169 SPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSEL 248 (332)
Q Consensus 169 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (332)
..........|+..|+|||.+.+...++.++|+||||+++|+|++|..||...........+... .+
T Consensus 153 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~--~~----------- 219 (277)
T cd06917 153 QNSSKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMMLIPKS--KP----------- 219 (277)
T ss_pred CCccccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhhhccccC--CC-----------
Confidence 44333444568889999999877566789999999999999999999999766543322211100 00
Q ss_pred ccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCCCC
Q 035861 249 PGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVPLP 315 (332)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~ 315 (332)
+ ......++.++.+++.+||+.||++||++.++++||||++....
T Consensus 220 -------------------~---~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~il~~~~~~~~~~~ 264 (277)
T cd06917 220 -------------------P---RLEDNGYSKLLREFVAACLDEEPKERLSAEELLKSKWIKAHSKT 264 (277)
T ss_pred -------------------C---CCCcccCCHHHHHHHHHHcCCCcccCcCHHHHhhChHhhccccC
Confidence 0 00011267889999999999999999999999999999886643
No 204
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=100.00 E-value=2e-42 Score=301.82 Aligned_cols=266 Identities=26% Similarity=0.446 Sum_probs=216.0
Q ss_pred ccccccchhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeee
Q 035861 3 MLQGCRSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVK 82 (332)
Q Consensus 3 ~~~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~ 82 (332)
+..+.....-|...+.||+|++|+||+|++..++..+++|++.......... ...+.+|+..++.++|+|+++++
T Consensus 13 ~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~-----~~~~~~E~~~l~~l~h~~iv~~~ 87 (313)
T cd06633 13 LFYKDDPEEIFVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEK-----WQDIIKEVKFLQQLKHPNTIEYK 87 (313)
T ss_pred HhccCCHHHHhhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHH-----HHHHHHHHHHHHhCCCCCCccEE
Confidence 3445555566888889999999999999999999999999987543322111 11456899999999999999999
Q ss_pred eeEEcCCCeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecc
Q 035861 83 EVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFG 162 (332)
Q Consensus 83 ~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~ 162 (332)
+++.+. ...|+||||+.|++.+.+.....++++..+..++.||+.||+|||++|++|+||+|+||+++.++.++|+|||
T Consensus 88 ~~~~~~-~~~~lv~e~~~~~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili~~~~~~kL~dfg 166 (313)
T cd06633 88 GCYLKE-HTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFG 166 (313)
T ss_pred EEEEeC-CEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEECCCCCEEEeecC
Confidence 998554 7889999999999888887767789999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCCCCCccccccccccchhhhcC--CCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCC
Q 035861 163 MSRQYGSPLKPYTSLVVTLWYRAPELLLG--AKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTET 240 (332)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 240 (332)
.+.... ......++..|+|||.+.. ...++.++|+||||+++|+|++|..||...+.......+..... +
T Consensus 167 ~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~--~-- 238 (313)
T cd06633 167 SASKSS----PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDS--P-- 238 (313)
T ss_pred CCcccC----CCCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCC--C--
Confidence 886432 2234567888999999842 35688899999999999999999999987766555444432110 0
Q ss_pred cccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCC
Q 035861 241 IWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVP 313 (332)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~ 313 (332)
....+.++..+++|+.+||+.+|.+||++.++++||||..-.
T Consensus 239 -------------------------------~~~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~~~~~~~~ 280 (313)
T cd06633 239 -------------------------------TLQSNEWTDSFRGFVDYCLQKIPQERPASAELLRHDFVRRDR 280 (313)
T ss_pred -------------------------------CCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCcccCCCc
Confidence 001122577899999999999999999999999999999754
No 205
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=1.2e-43 Score=304.40 Aligned_cols=259 Identities=26% Similarity=0.418 Sum_probs=207.7
Q ss_pred hcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCC
Q 035861 11 FEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHD 90 (332)
Q Consensus 11 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 90 (332)
..|+..+.||.|++|.||+|.+..++..||+|.+........ ...+.+|+..+++++|+||+++++.+.. ..
T Consensus 4 ~~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~-------~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~ 75 (277)
T cd06642 4 ELFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDE-------IEDIQQEITVLSQCDSPYITRYYGSYLK-GT 75 (277)
T ss_pred HHHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHH-------HHHHHHHHHHHHcCCCCccHhhhccccc-CC
Confidence 468899999999999999999998899999998864432111 1246689999999999999999999854 47
Q ss_pred eEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCCC
Q 035861 91 SVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSP 170 (332)
Q Consensus 91 ~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~~ 170 (332)
..++|+||++++.+..... ...+++..+..++.|++.||+|||++|++|+||+|+||+++.++.++|+|||.+......
T Consensus 76 ~~~lv~e~~~~~~L~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~ 154 (277)
T cd06642 76 KLWIIMEYLGGGSALDLLK-PGPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDT 154 (277)
T ss_pred ceEEEEEccCCCcHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEEeCCCCEEEccccccccccCc
Confidence 8999999999765554443 457899999999999999999999999999999999999999999999999998765433
Q ss_pred CCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCCcc
Q 035861 171 LKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPG 250 (332)
Q Consensus 171 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (332)
........++..|+|||.+.+ ..++.++|+||||+++|++++|..||...........+....
T Consensus 155 ~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~---------------- 217 (277)
T cd06642 155 QIKRNTFVGTPFWMAPEVIKQ-SAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNS---------------- 217 (277)
T ss_pred chhhhcccCcccccCHHHhCc-CCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHHhhhhcCC----------------
Confidence 222334467888999999876 568899999999999999999999987654433222111100
Q ss_pred ccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCCCC
Q 035861 251 AKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVPLP 315 (332)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~ 315 (332)
.......++.++.++|.+||+.+|++||++.++++||||..+...
T Consensus 218 --------------------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~~ 262 (277)
T cd06642 218 --------------------PPTLEGQYSKPFKEFVEACLNKDPRFRPTAKELLKHKFITRYTKK 262 (277)
T ss_pred --------------------CCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHHhHHHHHHhhh
Confidence 000112267889999999999999999999999999999876543
No 206
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=3.3e-43 Score=299.71 Aligned_cols=257 Identities=28% Similarity=0.495 Sum_probs=206.2
Q ss_pred hcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCC
Q 035861 11 FEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHD 90 (332)
Q Consensus 11 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 90 (332)
++|++.+.||.|++|.||++.+..+++.+++|.+........ ...+.+|++.++++.||||+++++.+..+ .
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~-------~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~ 72 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAI-------QKQILRELDILHKCNSPYIVGFYGAFYNN-G 72 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHH-------HHHHHHHHHHHHHCCCCchhhhheeeecC-C
Confidence 478999999999999999999999999999999876532211 12467899999999999999999998555 8
Q ss_pred eEEEEcccccc-cHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH-CCcccccCCCCCEEEcCCCcEEEeecccccccC
Q 035861 91 SVYMVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHD-NWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYG 168 (332)
Q Consensus 91 ~~~lv~e~~~~-~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~-~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~ 168 (332)
..++++|+++| ++.+.+......+++..+..++.|++.||++||+ .|++|+||+|+||+++.++.++|+|||.+....
T Consensus 73 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~ 152 (265)
T cd06605 73 DISICMEYMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLV 152 (265)
T ss_pred EEEEEEEecCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEECCCCCEEEeecccchhhH
Confidence 89999999995 4555444434789999999999999999999999 999999999999999999999999999887653
Q ss_pred CCCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC-----hHHHHHHHHHHcCCCCCCccc
Q 035861 169 SPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTT-----EVDQIDKIFKTLGTPTETIWP 243 (332)
Q Consensus 169 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~-----~~~~~~~~~~~~~~~~~~~~~ 243 (332)
.... ....++..|+|||.+.+ ..++.++|+||||+++|++++|..||.... ..+....+... ...
T Consensus 153 ~~~~--~~~~~~~~y~~PE~~~~-~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~---- 222 (265)
T cd06605 153 NSLA--KTFVGTSSYMAPERIQG-NDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNE---PPP---- 222 (265)
T ss_pred HHHh--hcccCChhccCHHHHcC-CCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcC---CCC----
Confidence 2211 12567888999999877 578999999999999999999999997542 11111111110 000
Q ss_pred CCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCC
Q 035861 244 GLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVP 313 (332)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~ 313 (332)
......++..++++|.+||..||++||++.+++.||||+..+
T Consensus 223 ----------------------------~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~~~~~ 264 (265)
T cd06605 223 ----------------------------RLPSGKFSPDFQDFVNLCLIKDPRERPSYKELLEHPFIKKYE 264 (265)
T ss_pred ----------------------------CCChhhcCHHHHHHHHHHcCCCchhCcCHHHHhhCchhhccc
Confidence 000111688899999999999999999999999999998754
No 207
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=3e-43 Score=298.85 Aligned_cols=256 Identities=30% Similarity=0.447 Sum_probs=207.3
Q ss_pred cccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCCe
Q 035861 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHDS 91 (332)
Q Consensus 12 ~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 91 (332)
+|++.+.||.|++|.||++.+..++..+++|++.......... ...+.+|++.+++++||||+++++.+ .+...
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~-----~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~ 74 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGS-----VRNVLNERRILQELNHPFLVNLWYSF-QDEEN 74 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhH-----HHHHHHHHHHHHhCCCCChHHHHHhh-cCCCe
Confidence 5899999999999999999999899999999997644322111 12567899999999999999999988 45578
Q ss_pred EEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCCCC
Q 035861 92 VYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPL 171 (332)
Q Consensus 92 ~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~~~ 171 (332)
.++|+||+.|+.+........++++..+..++.||+.||.+||+.|++|+||+|+||+++.++.++|+|||.+.......
T Consensus 75 ~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~ 154 (258)
T cd05578 75 MYLVVDLLLGGDLRYHLSQKVKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDT 154 (258)
T ss_pred EEEEEeCCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEcCCCCEEEeecccccccCCCc
Confidence 99999999986655555545789999999999999999999999999999999999999999999999999887654321
Q ss_pred CCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCCccc
Q 035861 172 KPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGA 251 (332)
Q Consensus 172 ~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (332)
......++..|+|||.+.+ ..++.++|+||||+++|++++|..||...... ....+......
T Consensus 155 -~~~~~~~~~~y~~PE~~~~-~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-~~~~~~~~~~~--------------- 216 (258)
T cd05578 155 -LTTSTSGTPGYMAPEVLCR-QGYSVAVDWWSLGVTAYECLRGKRPYRGHSRT-IRDQIRAKQET--------------- 216 (258)
T ss_pred -cccccCCChhhcCHHHHcc-cCCCCcccchhhHHHHHHHHhCCCCCCCCCcc-HHHHHHHHhcc---------------
Confidence 2344567888999999877 55899999999999999999999999876542 11111111100
Q ss_pred cccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCH--HHHhcCCCC
Q 035861 252 KANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITV--DDALNHYWF 309 (332)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~--~ell~hp~f 309 (332)
.....++.++..+.++|.+||+.||.+||++ .|+++||||
T Consensus 217 ------------------~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~~~~~~ 258 (258)
T cd05578 217 ------------------ADVLYPATWSTEAIDAINKLLERDPQKRLGDNLKDLKNHPYF 258 (258)
T ss_pred ------------------ccccCcccCcHHHHHHHHHHccCChhHcCCccHHHHhcCCCC
Confidence 0011122367899999999999999999999 999999998
No 208
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=6.2e-43 Score=297.80 Aligned_cols=254 Identities=31% Similarity=0.484 Sum_probs=204.9
Q ss_pred ccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCCeEEEEccc
Q 035861 19 ISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHDSVYMVMEY 98 (332)
Q Consensus 19 lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~lv~e~ 98 (332)
||.|++|.||++.+..+++.+++|++......... ....+.+|+..+++++|+|++++++.+. .....|+++|+
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~-----~~~~~~~e~~~l~~~~h~~i~~~~~~~~-~~~~~~lv~e~ 74 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKN-----QVDQVLTERDILSQAQSPYVVKLYYSFQ-GKKNLYLVMEY 74 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhh-----HHHHHHHHHHHHHhCCCcchhHHHHhee-cCcEEEEEEec
Confidence 68999999999999999999999998654332111 1225678999999999999999999884 45789999999
Q ss_pred ccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCCCCC------
Q 035861 99 MEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLK------ 172 (332)
Q Consensus 99 ~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~~~~------ 172 (332)
++|+.+..+....+.+++..+..++.|++.||++||+.|++|+||+|+||+++.++.++|+|||.+........
T Consensus 75 ~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~ 154 (265)
T cd05579 75 LPGGDLASLLENVGSLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDD 154 (265)
T ss_pred CCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEcCCCCEEEEecccchhcccCcccccccc
Confidence 98755554444456899999999999999999999999999999999999999999999999998876433211
Q ss_pred --CCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCCcc
Q 035861 173 --PYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPG 250 (332)
Q Consensus 173 --~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (332)
......++..|+|||.... ...+.++|+||||+++|++++|..||...........+.......+
T Consensus 155 ~~~~~~~~~~~~~~~Pe~~~~-~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~------------ 221 (265)
T cd05579 155 EKEDKRIVGTPDYIAPEVILG-QGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILNGKIEWP------------ 221 (265)
T ss_pred cccccCcccCccccCHHHhcC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCcCCC------------
Confidence 2234567788999999877 5588999999999999999999999988776655544433111100
Q ss_pred ccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCH---HHHhcCCCCCCCCC
Q 035861 251 AKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITV---DDALNHYWFHEVPL 314 (332)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~---~ell~hp~f~~~~~ 314 (332)
....++..+.+++.+||+.+|.+||++ .++|+||||+++.|
T Consensus 222 -----------------------~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~~~~~~~~~~ 265 (265)
T cd05579 222 -----------------------EDVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKNHPFFKGIDW 265 (265)
T ss_pred -----------------------ccccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhcCccccCCCC
Confidence 001147889999999999999999999 99999999998865
No 209
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-44 Score=314.96 Aligned_cols=253 Identities=22% Similarity=0.271 Sum_probs=204.6
Q ss_pred hhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCC
Q 035861 10 VFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDH 89 (332)
Q Consensus 10 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 89 (332)
..+..+...||+|.||+||+|.|.++ ||||++.......+.. +.|.+|+..+++-+|.||+.+.|++...
T Consensus 391 ~~ev~l~~rIGsGsFGtV~Rg~whGd---VAVK~Lnv~~pt~~ql------qaFKnEVa~lkkTRH~NIlLFMG~~~~p- 460 (678)
T KOG0193|consen 391 PEEVLLGERIGSGSFGTVYRGRWHGD---VAVKLLNVDDPTPEQL------QAFKNEVAVLKKTRHENILLFMGACMNP- 460 (678)
T ss_pred HHHhhccceeccccccceeecccccc---eEEEEEecCCCCHHHH------HHHHHHHHHHhhcchhhheeeehhhcCC-
Confidence 34677889999999999999999743 9999998876655422 2678999999999999999999999554
Q ss_pred CeEEEEccccccc-HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccC
Q 035861 90 DSVYMVMEYMEHD-LKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYG 168 (332)
Q Consensus 90 ~~~~lv~e~~~~~-l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~ 168 (332)
.. .||+.+|+|+ |...+.-....|+......|+.|+++|+.|||.++|+|+|||..|||+.++++|||+|||++..-.
T Consensus 461 ~~-AIiTqwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~ 539 (678)
T KOG0193|consen 461 PL-AIITQWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFLHEDLKVKIGDFGLATVKT 539 (678)
T ss_pred ce-eeeehhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEEccCCcEEEecccceeeee
Confidence 43 8999999995 555555556779999999999999999999999999999999999999999999999999987542
Q ss_pred --CCCCCCccccccccccchhhhcC--CCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccC
Q 035861 169 --SPLKPYTSLVVTLWYRAPELLLG--AKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPG 244 (332)
Q Consensus 169 --~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (332)
..........|...|+|||+++. ..++++.|||||+|+++|||++|..||...+..+.+-.+-++...
T Consensus 540 ~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqIifmVGrG~l~-------- 611 (678)
T KOG0193|consen 540 RWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQIIFMVGRGYLM-------- 611 (678)
T ss_pred eeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhheEEEecccccC--------
Confidence 22334455678889999999863 357899999999999999999999999955544433333222111
Q ss_pred CCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhc
Q 035861 245 LSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALN 305 (332)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 305 (332)
.-......+++.++++|+..||.+++++||.+.+||.
T Consensus 612 ------------------------pd~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~ 648 (678)
T KOG0193|consen 612 ------------------------PDLSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLS 648 (678)
T ss_pred ------------------------ccchhhhccCHHHHHHHHHHHHhcCcccCccHHHHHH
Confidence 1112223346779999999999999999999999887
No 210
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=9.4e-43 Score=297.41 Aligned_cols=263 Identities=28% Similarity=0.469 Sum_probs=206.0
Q ss_pred cccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCCe
Q 035861 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHDS 91 (332)
Q Consensus 12 ~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 91 (332)
+|+..+.||+|++|.||++.+..+++.+++|++......... .......+..|+..+++++|+|++++++.+. +...
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~ 77 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSE--QEEVVEALRKEIRLMARLNHPHIIRMLGATC-EDSH 77 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchh--HHHHHHHHHHHHHHHHHcCCCceehhhceec-cCCe
Confidence 488899999999999999999999999999998754322111 1111235678999999999999999999984 4478
Q ss_pred EEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCC-cEEEeecccccccCCC
Q 035861 92 VYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQG-VLKICDFGMSRQYGSP 170 (332)
Q Consensus 92 ~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~-~~~l~df~~~~~~~~~ 170 (332)
.++|+||+.|+.+..+....+++++..+..++.|++.||++||++|++|+||+|+||+++.++ .++|+|||.+......
T Consensus 78 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~ 157 (268)
T cd06630 78 FNLFVEWMAGGSVSHLLSKYGAFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAK 157 (268)
T ss_pred EEEEEeccCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEcccccccccccc
Confidence 899999999866655555567899999999999999999999999999999999999998776 6999999998765432
Q ss_pred CC----CCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCC
Q 035861 171 LK----PYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLS 246 (332)
Q Consensus 171 ~~----~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (332)
.. ......++..|+|||.+.+ ..++.++|+||||+++|++++|..||...........+......
T Consensus 158 ~~~~~~~~~~~~~~~~~~~PE~~~~-~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~---------- 226 (268)
T cd06630 158 GTGAGEFQGQLLGTIAFMAPEVLRG-EQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIASA---------- 226 (268)
T ss_pred cccCCccccccccccceeCHhHhcc-CCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhcc----------
Confidence 11 1123457888999999876 66889999999999999999999999754432222222111000
Q ss_pred CCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCC
Q 035861 247 ELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFH 310 (332)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~ 310 (332)
......+..+++.+.+++.+||..+|++||++.++++||||.
T Consensus 227 ----------------------~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~~~~~~ 268 (268)
T cd06630 227 ----------------------TTAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLKHPVFR 268 (268)
T ss_pred ----------------------CCCCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhcCcccC
Confidence 000111223688999999999999999999999999999985
No 211
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=100.00 E-value=1.7e-42 Score=304.77 Aligned_cols=294 Identities=37% Similarity=0.663 Sum_probs=224.1
Q ss_pred cccccccccccCcEEEEEEEECCC--CcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhC-CCCCeeeeeeeEEc-
Q 035861 12 EFEKLNKISEGTYGIVYRARDKKS--GEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSF-DHPSIVNVKEVVMD- 87 (332)
Q Consensus 12 ~y~~~~~lg~g~~g~v~~~~~~~~--~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~- 87 (332)
+|++.+.||+|+||.||++.+..+ +..||+|.+........ ....+..|+..++++ .|+||+++++....
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~------~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 74 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKI------LAKRALRELKLLRHFRGHKNITCLYDMDIVF 74 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccch------hHHHHHHHHHHHHHhcCCCChheeeeeeeec
Confidence 488999999999999999999887 88999999864321111 112456899999998 59999999987532
Q ss_pred --CCCeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeeccccc
Q 035861 88 --DHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSR 165 (332)
Q Consensus 88 --~~~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~ 165 (332)
.....+++++++++++...+.. ...+++..++.++.||+.||+|||+.|++|+||||+||+++.++.++|+|||.+.
T Consensus 75 ~~~~~~~~~~~e~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~~~~~~kl~Dfg~a~ 153 (332)
T cd07857 75 PGNFNELYLYEELMEADLHQIIRS-GQPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNADCELKICDFGLAR 153 (332)
T ss_pred cccCCcEEEEEecccCCHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEcCCCCEEeCcCCCce
Confidence 2245789999999888776654 6779999999999999999999999999999999999999999999999999987
Q ss_pred ccCCCCC----CCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCc
Q 035861 166 QYGSPLK----PYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETI 241 (332)
Q Consensus 166 ~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 241 (332)
....... ......|+..|+|||.+.+...++.++|+||+|+++|++++|..||...+.......+....+.+++..
T Consensus 154 ~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 233 (332)
T cd07857 154 GFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEET 233 (332)
T ss_pred ecccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHH
Confidence 6532211 122346788999999887656789999999999999999999999999888888888887776655443
Q ss_pred ccCCCCCccccccccCCchhhhhhhCCC-CccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCCCCCCCC
Q 035861 242 WPGLSELPGAKANFAKQPYNLLRKRFPA-ASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVPLPKSKD 319 (332)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~~~~~ 319 (332)
...+....... ........+. ......+.++..+++|+.+||+.||.+||++.+++.||||.+++-+....
T Consensus 234 ~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~~~~~~~~~~~~~~ 305 (332)
T cd07857 234 LSRIGSPKAQN-------YIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEHPYLAIWHDPDDEP 305 (332)
T ss_pred HHhhhhhhHHH-------HHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhhhhcCccccc
Confidence 22221100000 0000000000 00112234688999999999999999999999999999999988665444
No 212
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=2.1e-42 Score=296.85 Aligned_cols=258 Identities=24% Similarity=0.377 Sum_probs=198.8
Q ss_pred cccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHH---hhCCCCCeeeeeeeEEcCCCeEEE
Q 035861 18 KISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINIL---LSFDHPSIVNVKEVVMDDHDSVYM 94 (332)
Q Consensus 18 ~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l---~~l~h~~i~~~~~~~~~~~~~~~l 94 (332)
.||+|+||.||++.+..+++.+|+|.+............ ...++...+ ....|++++.+++.+..+ +..++
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~l 74 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGET-----LALNERIMLSLVSTGDCPFIVCMTYAFHTP-DKLCF 74 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHH-----HHHHHHHHHHHHhhCCCCcEeEEEEEEecC-CeEEE
Confidence 489999999999999999999999998754332211110 122343333 334799999999888554 77899
Q ss_pred EcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCCCCCCC
Q 035861 95 VMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPY 174 (332)
Q Consensus 95 v~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~~~~~~ 174 (332)
||||++|+.+.......+.+++..+..++.|++.||+|||+.|++|+||||+||+++.++.++|+|||.+...... ..
T Consensus 75 v~e~~~~~~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~--~~ 152 (279)
T cd05633 75 ILDLMNGGDLHYHLSQHGVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK--KP 152 (279)
T ss_pred EEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEECCCCCEEEccCCcceecccc--Cc
Confidence 9999997666555555778999999999999999999999999999999999999999999999999998755332 22
Q ss_pred ccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCCcccccc
Q 035861 175 TSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGAKAN 254 (332)
Q Consensus 175 ~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (332)
....++..|+|||.+..+..++.++|+||+|+++|++++|..||........ ..+.....
T Consensus 153 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~-~~~~~~~~------------------- 212 (279)
T cd05633 153 HASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK-HEIDRMTL------------------- 212 (279)
T ss_pred cCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCH-HHHHHHhh-------------------
Confidence 3346889999999987546688999999999999999999999975432111 11111000
Q ss_pred ccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCC-----CHHHHhcCCCCCCCCCCCC
Q 035861 255 FAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRI-----TVDDALNHYWFHEVPLPKS 317 (332)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp-----s~~ell~hp~f~~~~~~~~ 317 (332)
......++.++.++.++|.+||..||++|+ ++.++++||||+.+++...
T Consensus 213 --------------~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h~~~~~~~~~~~ 266 (279)
T cd05633 213 --------------TVNVELPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEHVFFKGIDWQQV 266 (279)
T ss_pred --------------cCCcCCccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhCccccCCCHhHH
Confidence 001112233788999999999999999999 6999999999999886655
No 213
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=1.1e-42 Score=298.46 Aligned_cols=258 Identities=26% Similarity=0.443 Sum_probs=208.4
Q ss_pred cccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCCe
Q 035861 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHDS 91 (332)
Q Consensus 12 ~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 91 (332)
-|++.+.||.|+||.||+|.+..++..+|+|.......... ...+.+|+..+++++|+||+++++.+..+ ..
T Consensus 5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~-------~~~~~~e~~~l~~l~h~~iv~~~~~~~~~-~~ 76 (277)
T cd06641 5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDE-------IEDIQQEITVLSQCDSPYVTKYYGSYLKD-TK 76 (277)
T ss_pred hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHH-------HHHHHHHHHHHHhcCCCCEeEEEEEEEeC-Ce
Confidence 57899999999999999999988899999998764322111 12466899999999999999999999554 78
Q ss_pred EEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCCCC
Q 035861 92 VYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPL 171 (332)
Q Consensus 92 ~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~~~ 171 (332)
.++|+||++++.+..... ...+++..+..++.|++.++.+||+.|++|+||+|+||+++.++.++|+|||.+.......
T Consensus 77 ~~lv~e~~~~~~l~~~i~-~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~ 155 (277)
T cd06641 77 LWIIMEYLGGGSALDLLE-PGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ 155 (277)
T ss_pred EEEEEEeCCCCcHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEECCCCCEEEeecccceecccch
Confidence 999999999865555544 4578999999999999999999999999999999999999999999999999887654332
Q ss_pred CCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCCccc
Q 035861 172 KPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGA 251 (332)
Q Consensus 172 ~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (332)
.......++..|+|||.+.+ ..++.++|+||||+++|++++|..||...........+.... .
T Consensus 156 ~~~~~~~~~~~y~~PE~~~~-~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~--~-------------- 218 (277)
T cd06641 156 IKRNTFVGTPFWMAPEVIKQ-SAYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFLIPKNN--P-------------- 218 (277)
T ss_pred hhhccccCCccccChhhhcc-CCCCchhhHHHHHHHHHHHHcCCCCCCccchHHHHHHHhcCC--C--------------
Confidence 22334467888999999876 567889999999999999999999997765444333321110 0
Q ss_pred cccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCCCC
Q 035861 252 KANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVPLP 315 (332)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~ 315 (332)
......++.++.+++.+||+.+|.+||++.++++||||.+....
T Consensus 219 --------------------~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~~~~~~~ 262 (277)
T cd06641 219 --------------------PTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFIVRFAKK 262 (277)
T ss_pred --------------------CCCCcccCHHHHHHHHHHccCChhhCcCHHHHHhCHHHhhhhhc
Confidence 00112368889999999999999999999999999999986543
No 214
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=1.9e-42 Score=293.73 Aligned_cols=258 Identities=27% Similarity=0.421 Sum_probs=206.7
Q ss_pred cccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCCe
Q 035861 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHDS 91 (332)
Q Consensus 12 ~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 91 (332)
+|+..+.||+|++|+||+|....++..|++|.+........ .......+..|+.+++.++|+|++++++.+. +...
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~---~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~-~~~~ 76 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQT---GQEAVKQLEQEIALLSKLQHPNIVQYLGTER-EEDN 76 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEcccccc---chHHHHHHHHHHHHHHhcCCCCchheeeeEe-cCCe
Confidence 47888999999999999999988899999999875432111 0001124678999999999999999999884 4478
Q ss_pred EEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCCCC
Q 035861 92 VYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPL 171 (332)
Q Consensus 92 ~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~~~ 171 (332)
.++++||++|+.+.........+++..+..++.||+.||++||+.|++|+||+|+||+++.++.++|+|||.+.......
T Consensus 77 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~ 156 (258)
T cd06632 77 LYIFLELVPGGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVDTNGVVKLADFGMAKQVVEFS 156 (258)
T ss_pred EEEEEEecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccceeccccc
Confidence 99999999976555555556779999999999999999999999999999999999999999999999999887653322
Q ss_pred CCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCCccc
Q 035861 172 KPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGA 251 (332)
Q Consensus 172 ~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (332)
......++..|+|||.+.....++.++|+||||+++|++++|..||...........+......
T Consensus 157 -~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~--------------- 220 (258)
T cd06632 157 -FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFKIGRSKEL--------------- 220 (258)
T ss_pred -cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHHHHHHhcccC---------------
Confidence 2344567888999999876334899999999999999999999999876644433332221100
Q ss_pred cccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCC
Q 035861 252 KANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWF 309 (332)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f 309 (332)
...++.+++.+.+++.+||+.+|++||++++++.|||+
T Consensus 221 --------------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~~ 258 (258)
T cd06632 221 --------------------PPIPDHLSDEAKDFILKCLQRDPSLRPTAAELLEHPFV 258 (258)
T ss_pred --------------------CCcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhcCCCC
Confidence 01122368889999999999999999999999999996
No 215
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00 E-value=3.4e-44 Score=289.37 Aligned_cols=257 Identities=29% Similarity=0.445 Sum_probs=206.3
Q ss_pred chhccccc-ccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhC-CCCCeeeeeeeEE
Q 035861 9 SVFEFEKL-NKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSF-DHPSIVNVKEVVM 86 (332)
Q Consensus 9 ~~~~y~~~-~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~ 86 (332)
..++|.+- +.||-|-.|.|..+.++.|++++|+|++..+. ..++|+++--.. .||||+.+++++.
T Consensus 59 itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds~-------------KARrEVeLHw~~s~h~~iV~IidVye 125 (400)
T KOG0604|consen 59 ITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDSP-------------KARREVELHWMASGHPHIVSIIDVYE 125 (400)
T ss_pred chhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcCH-------------HHHhHhhhhhhhcCCCceEEeehhhh
Confidence 45566654 46999999999999999999999999997543 223677765444 7999999999983
Q ss_pred ---cCCCeEEEEccccccc-HHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCC---CcEEE
Q 035861 87 ---DDHDSVYMVMEYMEHD-LKWLMESM-KQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQ---GVLKI 158 (332)
Q Consensus 87 ---~~~~~~~lv~e~~~~~-l~~~~~~~-~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~---~~~~l 158 (332)
.+...+.+|||.++|+ |...+..+ +..++|.++..|..||+.|+.|||+.+|+||||||+|+|.+.. ..+||
T Consensus 126 Ns~~~rkcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~~na~lKL 205 (400)
T KOG0604|consen 126 NSYQGRKCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTTSPNAPLKL 205 (400)
T ss_pred hhccCceeeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhheeeecCCCCcceEe
Confidence 3456789999999975 44444432 3569999999999999999999999999999999999999754 47999
Q ss_pred eecccccccCCCCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChH----HHHHHHHHHc
Q 035861 159 CDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEV----DQIDKIFKTL 234 (332)
Q Consensus 159 ~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~----~~~~~~~~~~ 234 (332)
+|||+++....+ ....+.+.|+.|.|||++.. ..++...|+||+||+||-|++|.+||...... ....+|..+.
T Consensus 206 tDfGFAK~t~~~-~~L~TPc~TPyYvaPevlg~-eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~gq 283 (400)
T KOG0604|consen 206 TDFGFAKETQEP-GDLMTPCFTPYYVAPEVLGP-EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTGQ 283 (400)
T ss_pred cccccccccCCC-ccccCCcccccccCHHHhCc-hhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhccC
Confidence 999999886543 34456788999999999977 66999999999999999999999999765432 2333443332
Q ss_pred CCCCCCcccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCC
Q 035861 235 GTPTETIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVP 313 (332)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~ 313 (332)
...+ -+.|..+|+..+++|+++|..+|++|.++++++.|||+++-+
T Consensus 284 y~FP---------------------------------~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~hpwi~~~~ 329 (400)
T KOG0604|consen 284 YEFP---------------------------------EPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDHPWINQYE 329 (400)
T ss_pred ccCC---------------------------------ChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcCchhcccc
Confidence 2222 223455899999999999999999999999999999999855
No 216
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=5.4e-43 Score=302.68 Aligned_cols=260 Identities=27% Similarity=0.452 Sum_probs=208.8
Q ss_pred chhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcC
Q 035861 9 SVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDD 88 (332)
Q Consensus 9 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 88 (332)
..++|++.+.||+|++|.||++.+..++..+++|.+....... ...+.+|+.+++.++|||++++++.+..+
T Consensus 17 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~--------~~~~~~e~~~l~~l~hp~i~~~~~~~~~~ 88 (293)
T cd06647 17 PKKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPK--------KELIINEILVMRENKHPNIVNYLDSYLVG 88 (293)
T ss_pred chhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchH--------HHHHHHHHHHHhhcCCCCeeehhheeeeC
Confidence 4579999999999999999999998889999999986432221 12456899999999999999999998554
Q ss_pred CCeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccC
Q 035861 89 HDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYG 168 (332)
Q Consensus 89 ~~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~ 168 (332)
...++|+||++++.+..... ...+++..+..++.|++.||++||++|++|+||+|+||+++.++.++|+|||.+....
T Consensus 89 -~~~~lv~e~~~~~~L~~~~~-~~~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~ 166 (293)
T cd06647 89 -DELWVVMEYLAGGSLTDVVT-ETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQIT 166 (293)
T ss_pred -CcEEEEEecCCCCcHHHHHh-hcCCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEcCCCCEEEccCcceeccc
Confidence 77899999998765555544 3468899999999999999999999999999999999999999999999999887654
Q ss_pred CCCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCC
Q 035861 169 SPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSEL 248 (332)
Q Consensus 169 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (332)
..........++..|+|||.+.. ..++.++|+||||+++|++++|..||...+.......+... .
T Consensus 167 ~~~~~~~~~~~~~~y~~PE~~~~-~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~--~------------ 231 (293)
T cd06647 167 PEQSKRSTMVGTPYWMAPEVVTR-KAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATN--G------------ 231 (293)
T ss_pred ccccccccccCChhhcCchhhcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheeehhcC--C------------
Confidence 43333344567888999999876 56889999999999999999999999765443221111100 0
Q ss_pred ccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCC
Q 035861 249 PGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVP 313 (332)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~ 313 (332)
......+..++..+.++|.+||..+|++||++.+++.||||....
T Consensus 232 --------------------~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h~~~~~~~ 276 (293)
T cd06647 232 --------------------TPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHPFLKIAK 276 (293)
T ss_pred --------------------CCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCHHHhcCc
Confidence 000111223678899999999999999999999999999998755
No 217
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=100.00 E-value=1.1e-42 Score=299.41 Aligned_cols=281 Identities=43% Similarity=0.768 Sum_probs=217.3
Q ss_pred ccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCC-CCCeeeeeeeEEcCCCe
Q 035861 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFD-HPSIVNVKEVVMDDHDS 91 (332)
Q Consensus 13 y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~ 91 (332)
|++.+.||.|++|+||+|+...+++.++||.+.......... ...+|+..++++. |+|++++++.+.. ...
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~-------~~~~e~~~l~~~~~h~~i~~~~~~~~~-~~~ 72 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEEC-------MNLREVKSLRKLNEHPNIVKLKEVFRE-NDE 72 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHH-------HHHHHHHHHHhccCCCCchhHHHHhhc-CCc
Confidence 678999999999999999999889999999987543321111 2346889999998 9999999999855 578
Q ss_pred EEEEcccccccHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCCC
Q 035861 92 VYMVMEYMEHDLKWLMESMK-QPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSP 170 (332)
Q Consensus 92 ~~lv~e~~~~~l~~~~~~~~-~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~~ 170 (332)
.++|||+++|++.+.+.... ..+++..+..++.|++.+|.+||++|++|+||+|+||+++.++.++|+|||.+......
T Consensus 73 ~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~ 152 (283)
T cd07830 73 LYFVFEYMEGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSR 152 (283)
T ss_pred EEEEEecCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCCEEEeecccceeccCC
Confidence 99999999888887776644 47899999999999999999999999999999999999999999999999998765432
Q ss_pred CCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCCcc
Q 035861 171 LKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPG 250 (332)
Q Consensus 171 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (332)
.......++..|+|||.+.....++.++|+||||+++|++++|..||......+....+....+.+....+........
T Consensus 153 -~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (283)
T cd07830 153 -PPYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLAS 231 (283)
T ss_pred -CCcCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhc
Confidence 2233456788899999987656789999999999999999999999988887777777776655555443322111110
Q ss_pred ccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCC
Q 035861 251 AKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWF 309 (332)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f 309 (332)
.... ......+.......+..+..+.+||.+||+.+|++||+++|++.||||
T Consensus 232 ~~~~-------~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~~~~ 283 (283)
T cd07830 232 KLGF-------RFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQHPYF 283 (283)
T ss_pred cccc-------cccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhCCCC
Confidence 0000 000000000011112246789999999999999999999999999998
No 218
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=1.3e-42 Score=298.93 Aligned_cols=261 Identities=25% Similarity=0.410 Sum_probs=203.5
Q ss_pred hcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHH-HhhCCCCCeeeeeeeEEcCC
Q 035861 11 FEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINI-LLSFDHPSIVNVKEVVMDDH 89 (332)
Q Consensus 11 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~-l~~l~h~~i~~~~~~~~~~~ 89 (332)
++|++.+.||+|+||.||++.+..+++.||+|++......... ..+..|... ++.+.|||++++++.+..+
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~-------~~~~~e~~~~~~~~~~~~iv~~~~~~~~~- 72 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQ-------KRLLMDLDISMRSVDCPYTVTFYGALFRE- 72 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHH-------HHHHHHHHHHHHHcCCCCeeeeeEEEecC-
Confidence 4799999999999999999999999999999998754322111 133455554 5666899999999998554
Q ss_pred CeEEEEcccccccHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHC-CcccccCCCCCEEEcCCCcEEEeeccccc
Q 035861 90 DSVYMVMEYMEHDLKWLMES---MKQPFSTSEVKCLMLQLLEGVKYLHDN-WVLHRDLKTSNLLLNNQGVLKICDFGMSR 165 (332)
Q Consensus 90 ~~~~lv~e~~~~~l~~~~~~---~~~~l~~~~~~~i~~~l~~~L~~lh~~-~i~H~di~p~Nili~~~~~~~l~df~~~~ 165 (332)
...++++||++|++.+.+.. ....+++..++.++.|++.||+|||++ +++|+||+|+||+++.++.++|+|||.+.
T Consensus 73 ~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~ 152 (283)
T cd06617 73 GDVWICMEVMDTSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINRNGQVKLCDFGISG 152 (283)
T ss_pred CcEEEEhhhhcccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeeccccc
Confidence 77899999999987665543 245689999999999999999999997 99999999999999999999999999987
Q ss_pred ccCCCCCCCccccccccccchhhhcCC---CCCCchhHHHHHHHHHHHHHhCCCCCCCCC-hHHHHHHHHHHcCCCCCCc
Q 035861 166 QYGSPLKPYTSLVVTLWYRAPELLLGA---KKYSTAVDMWSVGCIMAELLAKKPLFSGTT-EVDQIDKIFKTLGTPTETI 241 (332)
Q Consensus 166 ~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~sDi~slG~~l~~lltg~~pf~~~~-~~~~~~~~~~~~~~~~~~~ 241 (332)
..... .......++..|+|||.+.+. ..++.++|+||||+++|+|++|..||.... ..+...........
T Consensus 153 ~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~----- 226 (283)
T cd06617 153 YLVDS-VAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVVEEPSP----- 226 (283)
T ss_pred ccccc-cccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHHHHHhcCCC-----
Confidence 65322 122334578889999988642 346889999999999999999999996532 22222222211000
Q ss_pred ccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCCCC
Q 035861 242 WPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVPLP 315 (332)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~ 315 (332)
......++.++.+||.+||..+|++||++.++++||||......
T Consensus 227 ------------------------------~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~~ 270 (283)
T cd06617 227 ------------------------------QLPAEKFSPEFQDFVNKCLKKNYKERPNYPELLQHPFFELHLSK 270 (283)
T ss_pred ------------------------------CCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCchhhhcccc
Confidence 00011268899999999999999999999999999999996544
No 219
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-44 Score=312.54 Aligned_cols=242 Identities=25% Similarity=0.373 Sum_probs=202.9
Q ss_pred hhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCC
Q 035861 10 VFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDH 89 (332)
Q Consensus 10 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 89 (332)
+..+..++.||+|+.|.||+|+.. ++.||||+++.-. ..+++-|++|+|+||+.+.|+|...
T Consensus 123 Fe~IsELeWlGSGaQGAVF~Grl~--netVAVKKV~elk---------------ETdIKHLRkLkH~NII~FkGVCtqs- 184 (904)
T KOG4721|consen 123 FEEISELEWLGSGAQGAVFLGRLH--NETVAVKKVRELK---------------ETDIKHLRKLKHPNIITFKGVCTQS- 184 (904)
T ss_pred HHHhhhhhhhccCcccceeeeecc--CceehhHHHhhhh---------------hhhHHHHHhccCcceeeEeeeecCC-
Confidence 345667889999999999999988 8899999886321 2578899999999999999999554
Q ss_pred CeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCC
Q 035861 90 DSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGS 169 (332)
Q Consensus 90 ~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~ 169 (332)
..+|||||||..+-+..+.+....+.......|..+||.+++|||.+.|+|+|||.-||||+.+..|||+|||.+.....
T Consensus 185 PcyCIiMEfCa~GqL~~VLka~~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~ 264 (904)
T KOG4721|consen 185 PCYCIIMEFCAQGQLYEVLKAGRPITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILISYDDVVKISDFGTSKELSD 264 (904)
T ss_pred ceeEEeeeccccccHHHHHhccCccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEeeccceEEeccccchHhhhh
Confidence 88999999999665666666688999999999999999999999999999999999999999999999999999887643
Q ss_pred CCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCCc
Q 035861 170 PLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELP 249 (332)
Q Consensus 170 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (332)
. ...-...||+.|||||++++ .+.+.+.|||||||+||||+||..||.+.+....+--+-.
T Consensus 265 ~-STkMSFaGTVaWMAPEvIrn-ePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAIIwGVGs----------------- 325 (904)
T KOG4721|consen 265 K-STKMSFAGTVAWMAPEVIRN-EPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAIIWGVGS----------------- 325 (904)
T ss_pred h-hhhhhhhhhHhhhCHHHhhc-CCcccccceehhHHHHHHHHhcCCCccccchheeEEeccC-----------------
Confidence 3 22335689999999999998 7899999999999999999999999987654332211100
Q ss_pred cccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcC
Q 035861 250 GAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNH 306 (332)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 306 (332)
+..-+..+..++..++=||++||+-.|..|||+.+||.|
T Consensus 326 ------------------NsL~LpvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~H 364 (904)
T KOG4721|consen 326 ------------------NSLHLPVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLH 364 (904)
T ss_pred ------------------CcccccCcccCchHHHHHHHHHHhcCCCCCccHHHHHHH
Confidence 112234455588899999999999999999999999999
No 220
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=1.7e-42 Score=296.51 Aligned_cols=266 Identities=29% Similarity=0.448 Sum_probs=206.0
Q ss_pred cccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccc--cccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCC
Q 035861 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDC--LEYGFPISSLREINILLSFDHPSIVNVKEVVMDDH 89 (332)
Q Consensus 12 ~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~--~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 89 (332)
+|.+.+.||.|++|.||+|....+++.+|+|.+.......... ........+..|+..++.++|+|++++++.+ ...
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~ 80 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFE-TTE 80 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEe-ccC
Confidence 6889999999999999999998889999999986533222111 1111122456899999999999999999988 445
Q ss_pred CeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCC
Q 035861 90 DSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGS 169 (332)
Q Consensus 90 ~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~ 169 (332)
...++|+||++|+.+.......+.+++..+..++.|++.||.+||+.|++|+||+|+||+++.++.++|+|||.+.....
T Consensus 81 ~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~ 160 (272)
T cd06629 81 EYLSIFLEYVPGGSIGSCLRTYGRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVDADGICKISDFGISKKSDD 160 (272)
T ss_pred CceEEEEecCCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEEcCCCeEEEeeccccccccc
Confidence 78899999998765555544457899999999999999999999999999999999999999999999999999876432
Q ss_pred CCC--CCccccccccccchhhhcCCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCC
Q 035861 170 PLK--PYTSLVVTLWYRAPELLLGAK-KYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLS 246 (332)
Q Consensus 170 ~~~--~~~~~~~~~~y~aPE~~~~~~-~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (332)
... ......++..|+|||.+.... .++.++|+||||+++|++++|..||..........+.......+
T Consensus 161 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~--------- 231 (272)
T cd06629 161 IYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGNKRSAP--------- 231 (272)
T ss_pred cccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHHHHhhccccCC---------
Confidence 211 122345788899999987633 47899999999999999999999997655443333222110000
Q ss_pred CCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCC
Q 035861 247 ELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWF 309 (332)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f 309 (332)
.......+.++..+.++|.+||..+|++||+++++|+||||
T Consensus 232 ----------------------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~ 272 (272)
T cd06629 232 ----------------------PIPPDVSMNLSPVALDFLNACFTINPDNRPTARELLQHPFI 272 (272)
T ss_pred ----------------------cCCccccccCCHHHHHHHHHHhcCChhhCCCHHHHhhCCCC
Confidence 00011123378899999999999999999999999999997
No 221
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.2e-44 Score=284.14 Aligned_cols=300 Identities=42% Similarity=0.780 Sum_probs=248.7
Q ss_pred cccccchhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeee
Q 035861 4 LQGCRSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKE 83 (332)
Q Consensus 4 ~~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~ 83 (332)
.+++...+.|....+||+|.||.||+|+...+++.|++|++....... .+....++|+.+|..+.|+|++.+++
T Consensus 10 ~P~~~~~~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKe------GfpitalreikiL~~lkHenv~nliE 83 (376)
T KOG0669|consen 10 EPFCDEVSKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKE------GFPITALREIKILQLLKHENVVNLIE 83 (376)
T ss_pred CCceecchHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhcccc------CCcHHHHHHHHHHHHhcchhHHHHHH
Confidence 467788889999999999999999999999999999998876533211 22335679999999999999999998
Q ss_pred eEEc-------CCCeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcE
Q 035861 84 VVMD-------DHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVL 156 (332)
Q Consensus 84 ~~~~-------~~~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~ 156 (332)
+|-. .....|+|+.+|+.++...+......++..++.+++.+++.||.|+|+..|+|+|+|+.|+||+++|.+
T Consensus 84 ic~tk~Tp~~r~r~t~ylVf~~cehDLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLIt~dgil 163 (376)
T KOG0669|consen 84 ICRTKATPTNRDRATFYLVFDFCEHDLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLITKDGIL 163 (376)
T ss_pred HHhhccCCcccccceeeeeHHHhhhhHHHHhcCccccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEEcCCceE
Confidence 8732 224589999999999888888777889999999999999999999999999999999999999999999
Q ss_pred EEeecccccccCCC----CCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHH
Q 035861 157 KICDFGMSRQYGSP----LKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFK 232 (332)
Q Consensus 157 ~l~df~~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~ 232 (332)
||.|||+++....+ ...++....|.+|++||.+.+...++.+.|+|..||++.+|+|+.+.+.+.+....+..|..
T Consensus 164 klADFGlar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~ 243 (376)
T KOG0669|consen 164 KLADFGLARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQ 243 (376)
T ss_pred EeeccccccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHH
Confidence 99999999655321 12234456699999999999989999999999999999999999999999999999999988
Q ss_pred HcCCCCCCcccCCCCCcccccc----ccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCC
Q 035861 233 TLGTPTETIWPGLSELPGAKAN----FAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYW 308 (332)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~ 308 (332)
..+....+.||.+.+++-...- ..+.......+...... -++++.+|+.+||..||.+|+.+.++|.|.|
T Consensus 244 LcGs~tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~------kd~~a~dLle~ll~~DP~kR~~ad~alnh~~ 317 (376)
T KOG0669|consen 244 LCGSITKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYV------KDDEALDLLEKLLKLDPTKRIDADQALNHDF 317 (376)
T ss_pred HhccCCcccCCCcccchHHHhccCCCCCcchhhhhhhhccccc------CChhHHHHHHHHhccCcccCcchHhhhchhh
Confidence 8999999999988876643221 22222333333332222 3678889999999999999999999999999
Q ss_pred CCCCCCC
Q 035861 309 FHEVPLP 315 (332)
Q Consensus 309 f~~~~~~ 315 (332)
|..=++|
T Consensus 318 F~kdp~p 324 (376)
T KOG0669|consen 318 FWKDPMP 324 (376)
T ss_pred hhcCCcc
Confidence 9887766
No 222
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=3.1e-42 Score=293.82 Aligned_cols=260 Identities=28% Similarity=0.433 Sum_probs=204.0
Q ss_pred hcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcC-C
Q 035861 11 FEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDD-H 89 (332)
Q Consensus 11 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-~ 89 (332)
.+|++.+.||+|++|.||.+.+..++..|++|.+........... ....+.+|+..++++.|+||+++++.+.+. .
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~---~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~ 78 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSK---EVNALECEIQLLKNLLHERIVQYYGCLRDPME 78 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHH---HHHHHHHHHHHHHhcCCCCeeeEEeEeccCCC
Confidence 579999999999999999999999999999999864332211110 012456799999999999999999987543 3
Q ss_pred CeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCC
Q 035861 90 DSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGS 169 (332)
Q Consensus 90 ~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~ 169 (332)
...++++||++|+.+.........+++..+..++.|++.||++||+.|++|+||+|+||+++.++.++|+|||.+.....
T Consensus 79 ~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~ 158 (265)
T cd06652 79 RTLSIFMEHMPGGSIKDQLKSYGALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRDSVGNVKLGDFGASKRLQT 158 (265)
T ss_pred ceEEEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEecCCCCEEECcCcccccccc
Confidence 56889999998755554444456789999999999999999999999999999999999999999999999998875432
Q ss_pred CC---CCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCC
Q 035861 170 PL---KPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLS 246 (332)
Q Consensus 170 ~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (332)
.. .......++..|+|||.+.+ ..++.++|+||||+++|++++|..||..........+.... +..
T Consensus 159 ~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~---~~~------- 227 (265)
T cd06652 159 ICLSGTGMKSVTGTPYWMSPEVISG-EGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQ---PTN------- 227 (265)
T ss_pred ccccccccccCCCCccccChhhhcC-CCCCcchhHHHHHHHHHHHhhCCCCCCccchHHHHHHHhcC---CCC-------
Confidence 11 11233457888999999876 66899999999999999999999999776544433322211 100
Q ss_pred CCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCC
Q 035861 247 ELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFH 310 (332)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~ 310 (332)
...++.++..+.++|.+|+. +|++||+++++++|||++
T Consensus 228 -------------------------~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~~~~~~ 265 (265)
T cd06652 228 -------------------------PVLPPHVSDHCRDFLKRIFV-EAKLRPSADELLRHTFVH 265 (265)
T ss_pred -------------------------CCCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhcCcccC
Confidence 01122367788899999995 899999999999999985
No 223
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=1.8e-42 Score=294.90 Aligned_cols=258 Identities=29% Similarity=0.484 Sum_probs=211.3
Q ss_pred hcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCC
Q 035861 11 FEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHD 90 (332)
Q Consensus 11 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 90 (332)
++|++.+.||.|++|.||++++..+++.+++|++....... ....+..|+..+.+++|+|++++++.+..+ .
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~-------~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-~ 72 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEE-------FRKQLLRELKTLRSCESPYVVKCYGAFYKE-G 72 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchH-------HHHHHHHHHHHHHhcCCCCeeeEEEEEccC-C
Confidence 47899999999999999999999999999999987654321 112567899999999999999999998555 8
Q ss_pred eEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH-CCcccccCCCCCEEEcCCCcEEEeecccccccCC
Q 035861 91 SVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHD-NWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGS 169 (332)
Q Consensus 91 ~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~-~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~ 169 (332)
..++|+||++++.+.........+++..++.++.|++.||++||+ .|++|+||+|+||+++.++.++|+|||.+.....
T Consensus 73 ~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~ 152 (264)
T cd06623 73 EISIVLEYMDGGSLADLLKKVGKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLINSKGEVKIADFGISKVLEN 152 (264)
T ss_pred eEEEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEECCCCCEEEccCccceeccc
Confidence 899999999965555555546889999999999999999999999 9999999999999999999999999999887654
Q ss_pred CCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC---hHHHHHHHHHHcCCCCCCcccCCC
Q 035861 170 PLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTT---EVDQIDKIFKTLGTPTETIWPGLS 246 (332)
Q Consensus 170 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 246 (332)
.........++..|+|||.+.+ ..++.++|+||||+++|++++|..||.... ..+....+... ..
T Consensus 153 ~~~~~~~~~~~~~y~~pE~~~~-~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~---~~-------- 220 (264)
T cd06623 153 TLDQCNTFVGTVTYMSPERIQG-ESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAICDG---PP-------- 220 (264)
T ss_pred CCCcccceeecccccCHhhhCC-CCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHhcC---CC--------
Confidence 4333335567889999999877 578999999999999999999999997764 22222222211 00
Q ss_pred CCccccccccCCchhhhhhhCCCCccCCCCC-CCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCC
Q 035861 247 ELPGAKANFAKQPYNLLRKRFPAASFTGSPV-LSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVP 313 (332)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~ 313 (332)
...... ++..+.++|.+||..+|++||+++++++||||++++
T Consensus 221 -------------------------~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~~~~~~~~ 263 (264)
T cd06623 221 -------------------------PSLPAEEFSPEFRDFISACLQKDPKKRPSAAELLQHPFIKKAD 263 (264)
T ss_pred -------------------------CCCCcccCCHHHHHHHHHHccCChhhCCCHHHHHhCHHHHhcc
Confidence 011122 678899999999999999999999999999998754
No 224
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=100.00 E-value=1.2e-42 Score=298.50 Aligned_cols=255 Identities=29% Similarity=0.462 Sum_probs=207.7
Q ss_pred hcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCC-CCCeeeeeeeEEcCC
Q 035861 11 FEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFD-HPSIVNVKEVVMDDH 89 (332)
Q Consensus 11 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~ 89 (332)
++|++.+.||+|++|.||+++...++..+++|++.......... ...+..|..+++++. |+||+++++.+ .+.
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~-----~~~~~~e~~~~~~l~~~~~i~~~~~~~-~~~ 74 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKK-----VKYVKIEKEVLTRLNGHPGIIKLYYTF-QDE 74 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHH-----HHHHHHHHHHHHhcccCCCchhHHHHh-cCC
Confidence 47999999999999999999999999999999987643221111 124568899999998 99999999988 445
Q ss_pred CeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCC
Q 035861 90 DSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGS 169 (332)
Q Consensus 90 ~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~ 169 (332)
...+++||+++++.+.......+.+++..++.++.|++.||++||+.|++|+||+|+||+++.++.++|+|||.+.....
T Consensus 75 ~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~ 154 (280)
T cd05581 75 ENLYFVLEYAPNGELLQYIRKYGSLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLDKDMHIKITDFGTAKVLDP 154 (280)
T ss_pred ceEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEecCCccccccCC
Confidence 78999999996544444444466899999999999999999999999999999999999999999999999999876543
Q ss_pred CC--------------------CCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Q 035861 170 PL--------------------KPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDK 229 (332)
Q Consensus 170 ~~--------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~ 229 (332)
.. .......++..|+|||.+.. ..++.++|+||||++++++++|..||...........
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~-~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~ 233 (280)
T cd05581 155 NSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNE-KPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLTFQK 233 (280)
T ss_pred ccccccCCCCCccccccccccccccccccCCccccCHHHhCC-CCCChhhhHHHHHHHHHHHHhCCCCCCCccHHHHHHH
Confidence 22 11223356788999999876 5689999999999999999999999988776555554
Q ss_pred HHHHcCCCCCCcccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCH----HHHhc
Q 035861 230 IFKTLGTPTETIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITV----DDALN 305 (332)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~----~ell~ 305 (332)
+..... ..+..+++.+.+||.+||+.+|.+||++ +++++
T Consensus 234 ~~~~~~-------------------------------------~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~ 276 (280)
T cd05581 234 ILKLEY-------------------------------------SFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKA 276 (280)
T ss_pred HHhcCC-------------------------------------CCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhc
Confidence 432211 1112368889999999999999999999 99999
Q ss_pred CCCC
Q 035861 306 HYWF 309 (332)
Q Consensus 306 hp~f 309 (332)
||||
T Consensus 277 ~~~~ 280 (280)
T cd05581 277 HPFF 280 (280)
T ss_pred CCCC
Confidence 9998
No 225
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=2.5e-42 Score=292.95 Aligned_cols=254 Identities=28% Similarity=0.511 Sum_probs=205.2
Q ss_pred cccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCCe
Q 035861 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHDS 91 (332)
Q Consensus 12 ~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 91 (332)
+|++.+.||.|++|.||++.++.++..+|+|.+......... ...+.+|+..++.++|+|++++++.+ .....
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~------~~~~~~E~~~l~~~~h~~i~~~~~~~-~~~~~ 73 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKE------KEASKKEVILLAKMKHPNIVTFFASF-QENGR 73 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchh------hHHHHHHHHHHHhCCCCChhhhhhee-ccCCe
Confidence 588999999999999999999999999999998764322211 12456899999999999999999988 44578
Q ss_pred EEEEcccccc-cHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCC-cEEEeecccccccC
Q 035861 92 VYMVMEYMEH-DLKWLMESMK-QPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQG-VLKICDFGMSRQYG 168 (332)
Q Consensus 92 ~~lv~e~~~~-~l~~~~~~~~-~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~-~~~l~df~~~~~~~ 168 (332)
.++|+||+++ ++.+.+.... ..+++..+..++.|++.||+|||+.+++|+||+|+||+++.++ .++|+|||.+....
T Consensus 74 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~ 153 (257)
T cd08225 74 LFIVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLN 153 (257)
T ss_pred EEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEcCCCCeEEecccccchhcc
Confidence 9999999986 4444444422 3579999999999999999999999999999999999999886 46999999887765
Q ss_pred CCCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCC
Q 035861 169 SPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSEL 248 (332)
Q Consensus 169 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (332)
..........++..|+|||.+.. ..++.++|+||||+++|++++|..||...+.......+.....
T Consensus 154 ~~~~~~~~~~~~~~~~ape~~~~-~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~------------- 219 (257)
T cd08225 154 DSMELAYTCVGTPYYLSPEICQN-RPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVLKICQGYF------------- 219 (257)
T ss_pred CCcccccccCCCccccCHHHHcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhcccC-------------
Confidence 44333344568888999999876 5688999999999999999999999987665544443322110
Q ss_pred ccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCC
Q 035861 249 PGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWF 309 (332)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f 309 (332)
....+.++..+.++|.+||..+|++||++.++++||||
T Consensus 220 -----------------------~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~~~~ 257 (257)
T cd08225 220 -----------------------APISPNFSRDLRSLISQLFKVSPRDRPSITSILKRPFL 257 (257)
T ss_pred -----------------------CCCCCCCCHHHHHHHHHHhccChhhCcCHHHHhhCCCC
Confidence 01122367889999999999999999999999999997
No 226
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=2.9e-42 Score=296.36 Aligned_cols=249 Identities=17% Similarity=0.180 Sum_probs=200.1
Q ss_pred ccccc--ccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEc--
Q 035861 12 EFEKL--NKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMD-- 87 (332)
Q Consensus 12 ~y~~~--~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-- 87 (332)
+++.. ..||+|+++.||+|... |+.||||++.......... ...+.+|+.++++++||||+++++++.+
T Consensus 19 ~i~~~~~~~i~~g~~~~v~~~~~~--~~~vavK~~~~~~~~~~~~-----~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~ 91 (283)
T PHA02988 19 DIDKYTSVLIKENDQNSIYKGIFN--NKEVIIRTFKKFHKGHKVL-----IDITENEIKNLRRIDSNNILKIYGFIIDIV 91 (283)
T ss_pred HcCCCCCeEEeeCCceEEEEEEEC--CEEEEEEeccccccccHHH-----HHHHHHHHHHHHhcCCCCEEEEeeeEEecc
Confidence 44444 67999999999999985 8899999997543222111 1245689999999999999999999855
Q ss_pred C-CCeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH-CCcccccCCCCCEEEcCCCcEEEeeccccc
Q 035861 88 D-HDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHD-NWVLHRDLKTSNLLLNNQGVLKICDFGMSR 165 (332)
Q Consensus 88 ~-~~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~-~~i~H~di~p~Nili~~~~~~~l~df~~~~ 165 (332)
+ ....++||||++|+.+.......+.+++.....++.|++.||++||+ .+++|+||+|+||+++.++.+||+|||++.
T Consensus 92 ~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~~~~~~kl~dfg~~~ 171 (283)
T PHA02988 92 DDLPRLSLILEYCTRGYLREVLDKEKDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTENYKLKIICHGLEK 171 (283)
T ss_pred cCCCceEEEEEeCCCCcHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEECCCCcEEEcccchHh
Confidence 2 35689999999987655555556789999999999999999999998 499999999999999999999999999987
Q ss_pred ccCCCCCCCccccccccccchhhhcCC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccC
Q 035861 166 QYGSPLKPYTSLVVTLWYRAPELLLGA-KKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPG 244 (332)
Q Consensus 166 ~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (332)
..... .....++..|+|||.+.+. ..++.++||||||+++|+|++|..||...+..+....+......++
T Consensus 172 ~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~------ 242 (283)
T PHA02988 172 ILSSP---PFKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIYDLIINKNNSLK------ 242 (283)
T ss_pred hhccc---cccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCC------
Confidence 65332 1234678899999998652 4689999999999999999999999998876666555543211111
Q ss_pred CCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhc
Q 035861 245 LSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALN 305 (332)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 305 (332)
.+..+++.+.+|+.+||+.||++|||+.++++
T Consensus 243 -----------------------------~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 274 (283)
T PHA02988 243 -----------------------------LPLDCPLEIKCIVEACTSHDSIKRPNIKEILY 274 (283)
T ss_pred -----------------------------CCCcCcHHHHHHHHHHhcCCcccCcCHHHHHH
Confidence 11236889999999999999999999999985
No 227
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=2.2e-42 Score=298.25 Aligned_cols=267 Identities=24% Similarity=0.387 Sum_probs=206.9
Q ss_pred hhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCC-CCCeeeeeeeEEcC
Q 035861 10 VFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFD-HPSIVNVKEVVMDD 88 (332)
Q Consensus 10 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~ 88 (332)
.++|+..+.||+|++|.||++.+..+++.+|+|.+........ ...+..|+..+.++. |+||+++++.+..+
T Consensus 3 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~-------~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~ 75 (288)
T cd06616 3 AEDLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKE-------QKRLLMDLDVVMRSSDCPYIVKFYGALFRE 75 (288)
T ss_pred HHHhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHH-------HHHHHHHHHHHHHhcCCCCEeeeeeEEecC
Confidence 4578899999999999999999999999999999875432211 124568999998985 99999999988554
Q ss_pred CCeEEEEcccccccHHHHH---H-hcCCCCCHHHHHHHHHHHHHHHHHHHH-CCcccccCCCCCEEEcCCCcEEEeeccc
Q 035861 89 HDSVYMVMEYMEHDLKWLM---E-SMKQPFSTSEVKCLMLQLLEGVKYLHD-NWVLHRDLKTSNLLLNNQGVLKICDFGM 163 (332)
Q Consensus 89 ~~~~~lv~e~~~~~l~~~~---~-~~~~~l~~~~~~~i~~~l~~~L~~lh~-~~i~H~di~p~Nili~~~~~~~l~df~~ 163 (332)
...+++||++++++.+.. . .....+++..+..++.|++.||+|||+ .|++|+||+|+||+++.++.++|+|||+
T Consensus 76 -~~~~~~~e~~~~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~ 154 (288)
T cd06616 76 -GDCWICMELMDISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLDRNGNIKLCDFGI 154 (288)
T ss_pred -CcEEEEEecccCCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEccCCcEEEeecch
Confidence 678899999987654332 1 224679999999999999999999997 4999999999999999999999999999
Q ss_pred ccccCCCCCCCccccccccccchhhhcCC--CCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCc
Q 035861 164 SRQYGSPLKPYTSLVVTLWYRAPELLLGA--KKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETI 241 (332)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 241 (332)
+....... ......++..|+|||.+.+. ..++.++|+||+|+++|++++|..||..... ....+.......+.
T Consensus 155 ~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~--~~~~~~~~~~~~~~-- 229 (288)
T cd06616 155 SGQLVDSI-AKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNS--VFDQLTQVVKGDPP-- 229 (288)
T ss_pred hHHhccCC-ccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcch--HHHHHhhhcCCCCC--
Confidence 87653321 22334578889999999764 3688999999999999999999999976542 12222111110000
Q ss_pred ccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCCCCC
Q 035861 242 WPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVPLPK 316 (332)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~~ 316 (332)
.........++.++.+||.+||+.+|++||++++|++||||.+..+.+
T Consensus 230 ---------------------------~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~~~~~~~~~~~ 277 (288)
T cd06616 230 ---------------------------ILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLEHPFIKDYEERN 277 (288)
T ss_pred ---------------------------cCCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhchhhcc
Confidence 000111123788999999999999999999999999999999866544
No 228
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=4.4e-42 Score=292.59 Aligned_cols=258 Identities=31% Similarity=0.499 Sum_probs=205.6
Q ss_pred cccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCCe
Q 035861 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHDS 91 (332)
Q Consensus 12 ~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 91 (332)
+|++.+.||+|++|.||++....+++.+++|.+....... .....+.+|+..+++++|+||+++++... +...
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~------~~~~~~~~e~~~~~~l~~~~i~~~~~~~~-~~~~ 73 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDP------KTIKEIADEMKVLELLKHPNLVKYYGVEV-HREK 73 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccch------HHHHHHHHHHHHHHhCCCCChhheeeeEe-cCCE
Confidence 5899999999999999999998889999999987654331 11235679999999999999999999874 4478
Q ss_pred EEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCCCC
Q 035861 92 VYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPL 171 (332)
Q Consensus 92 ~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~~~ 171 (332)
.++|+||++++.+.........+++..+..++.|++.||++||+.|++|+||+|+||+++.++.++|+|||.+.......
T Consensus 74 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~ 153 (264)
T cd06626 74 VYIFMEYCSGGTLEELLEHGRILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNT 153 (264)
T ss_pred EEEEEecCCCCcHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEcccccccccCCCC
Confidence 99999999976666555556678999999999999999999999999999999999999999999999999987764332
Q ss_pred CCC----ccccccccccchhhhcCCC--CCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCC
Q 035861 172 KPY----TSLVVTLWYRAPELLLGAK--KYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGL 245 (332)
Q Consensus 172 ~~~----~~~~~~~~y~aPE~~~~~~--~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (332)
... ....++..|+|||.+.... ..+.++|+||||+++|++++|..||............... ...+
T Consensus 154 ~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~~~~~-~~~~------- 225 (264)
T cd06626 154 TTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFHVGA-GHKP------- 225 (264)
T ss_pred CcccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHHHHHhc-CCCC-------
Confidence 221 2346788999999987632 3788999999999999999999999765322221111111 1000
Q ss_pred CCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCC
Q 035861 246 SELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWF 309 (332)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f 309 (332)
..+....++..+.+||.+||+.+|.+||++++++.|||+
T Consensus 226 -------------------------~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~~~~ 264 (264)
T cd06626 226 -------------------------PIPDSLQLSPEGKDFLDRCLESDPKKRPTASELLQHPFV 264 (264)
T ss_pred -------------------------CCCcccccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence 011112258889999999999999999999999999996
No 229
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=2.1e-42 Score=293.15 Aligned_cols=250 Identities=27% Similarity=0.447 Sum_probs=203.4
Q ss_pred cccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCCe
Q 035861 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHDS 91 (332)
Q Consensus 12 ~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 91 (332)
+|++.+.||.|++|.||++++..++..+++|.+........ ...+..|+..++++.|+|++++++.+ .+...
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~-------~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~ 72 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSA-------VEDSRKEAVLLAKMKHPNIVAFKESF-EADGH 72 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHH-------HHHHHHHHHHHHhCCCCCcceEEEEE-EECCE
Confidence 58899999999999999999999999999999865432111 12456899999999999999999998 44488
Q ss_pred EEEEcccccc-cHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCC
Q 035861 92 VYMVMEYMEH-DLKWLMES-MKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGS 169 (332)
Q Consensus 92 ~~lv~e~~~~-~l~~~~~~-~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~ 169 (332)
.++++||+++ ++.+.+.. ....+++..+..++.|++.||.+||++|++|+||+|+||+++.++.++++|||.+.....
T Consensus 73 ~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~ 152 (255)
T cd08219 73 LYIVMEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTS 152 (255)
T ss_pred EEEEEeeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEECCCCcEEEcccCcceeecc
Confidence 9999999986 45554443 234689999999999999999999999999999999999999999999999999876644
Q ss_pred CCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCCc
Q 035861 170 PLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELP 249 (332)
Q Consensus 170 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (332)
.........++..|+|||++.+ ..++.++|+||||+++|+|++|..||...+.......+......+
T Consensus 153 ~~~~~~~~~~~~~~~aPE~~~~-~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~------------ 219 (255)
T cd08219 153 PGAYACTYVGTPYYVPPEIWEN-MPYNNKSDIWSLGCILYELCTLKHPFQANSWKNLILKVCQGSYKP------------ 219 (255)
T ss_pred cccccccccCCccccCHHHHcc-CCcCchhhhhhhchhheehhhccCCCCCCCHHHHHHHHhcCCCCC------------
Confidence 3333344567888999999876 568999999999999999999999998776555444433221100
Q ss_pred cccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcC
Q 035861 250 GAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNH 306 (332)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 306 (332)
.+..++..+.+||.+||+.||++||++.++++-
T Consensus 220 ------------------------~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 220 ------------------------LPSHYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred ------------------------CCcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 112267889999999999999999999999864
No 230
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00 E-value=4.1e-42 Score=294.98 Aligned_cols=259 Identities=24% Similarity=0.362 Sum_probs=200.5
Q ss_pred cccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHH---HHHhhCCCCCeeeeeeeEEcCCCeEEE
Q 035861 18 KISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREI---NILLSFDHPSIVNVKEVVMDDHDSVYM 94 (332)
Q Consensus 18 ~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~---~~l~~l~h~~i~~~~~~~~~~~~~~~l 94 (332)
.||+|++|+||++.+..+++.||+|.+............ ....|. ..++...||+++.+.+.+.. ....++
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~ 74 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGET-----LALNERIMLSLVSTGDCPFIVCMSYAFHT-PDKLSF 74 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHH-----HHHHHHHHHHHHHhCCCCcEeeeeeeeec-CCEEEE
Confidence 489999999999999989999999998764332211100 112333 34445689999999998844 478999
Q ss_pred EcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCCCCCCC
Q 035861 95 VMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPY 174 (332)
Q Consensus 95 v~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~~~~~~ 174 (332)
|+||+.|+.+.......+.+++..+..++.|++.||+|||+.+++|+||+|+||+++.++.++|+|||.+...... ..
T Consensus 75 v~e~~~g~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~--~~ 152 (278)
T cd05606 75 ILDLMNGGDLHYHLSQHGVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK--KP 152 (278)
T ss_pred EEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEECCCCCEEEccCcCccccCcc--CC
Confidence 9999998766655555778999999999999999999999999999999999999999999999999988755332 22
Q ss_pred ccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCCcccccc
Q 035861 175 TSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGAKAN 254 (332)
Q Consensus 175 ~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (332)
....|+..|+|||.+.+...++.++|+||+|+++|+|++|..||.......... ......
T Consensus 153 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~-~~~~~~------------------- 212 (278)
T cd05606 153 HASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHE-IDRMTL------------------- 212 (278)
T ss_pred cCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHH-HHHHhh-------------------
Confidence 345688999999999765568899999999999999999999997653221111 111000
Q ss_pred ccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCC-----CHHHHhcCCCCCCCCCCCCC
Q 035861 255 FAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRI-----TVDDALNHYWFHEVPLPKSK 318 (332)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp-----s~~ell~hp~f~~~~~~~~~ 318 (332)
......+..++..+.+++.+||..+|.+|| ++.++++||||..+.+....
T Consensus 213 --------------~~~~~~~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~~~~~~~~~~~~~ 267 (278)
T cd05606 213 --------------TMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEHPFFRSLDWQMVF 267 (278)
T ss_pred --------------ccCCCCCCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhCccccCCCchHhh
Confidence 000111223688999999999999999999 99999999999998876663
No 231
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=3.7e-42 Score=291.70 Aligned_cols=253 Identities=28% Similarity=0.466 Sum_probs=205.5
Q ss_pred cccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCCe
Q 035861 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHDS 91 (332)
Q Consensus 12 ~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 91 (332)
+|++.+.||.|++|.||++.+..++..+++|.+......... ...+.+|+..+++++|+|++++++.+. ....
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~------~~~~~~e~~~l~~~~~~~i~~~~~~~~-~~~~ 73 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDE------RLAAQNECQVLKLLSHPNIIEYYENFL-EDKA 73 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHH------HHHHHHHHHHHhhCCCCchhheeeeEe-cCCE
Confidence 589999999999999999999999999999999754332211 125678999999999999999999884 4478
Q ss_pred EEEEcccccc-cHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCC-cEEEeecccccccC
Q 035861 92 VYMVMEYMEH-DLKWLMESM-KQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQG-VLKICDFGMSRQYG 168 (332)
Q Consensus 92 ~~lv~e~~~~-~l~~~~~~~-~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~-~~~l~df~~~~~~~ 168 (332)
.++|+|+++| ++.+.+... ...+++..+..++.+++.+|++||++|++|+||+|+||+++.++ .++|+|||.+....
T Consensus 74 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~ 153 (256)
T cd08220 74 LMIVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLDKHKMVVKIGDFGISKILS 153 (256)
T ss_pred EEEEEecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEccCCCceecC
Confidence 9999999987 455555443 34589999999999999999999999999999999999998654 68999999998764
Q ss_pred CCCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCC
Q 035861 169 SPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSEL 248 (332)
Q Consensus 169 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (332)
... ......++..|+|||.+.. ..++.++|+||+|+++|++++|..||...+.......+......+
T Consensus 154 ~~~-~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~----------- 220 (256)
T cd08220 154 SKS-KAYTVVGTPCYISPELCEG-KPYNQKSDIWALGCVLYELASLKRAFEAANLPALVLKIMSGTFAP----------- 220 (256)
T ss_pred CCc-cccccccCCcccCchhccC-CCCCcccchHHHHHHHHHHHhCCCCcccCchHHHHHHHHhcCCCC-----------
Confidence 332 2233467888999999876 568899999999999999999999998776655544443221110
Q ss_pred ccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCC
Q 035861 249 PGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWF 309 (332)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f 309 (332)
....++..+.+++.+||+.+|++||++.|+++||||
T Consensus 221 -------------------------~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~~p~~ 256 (256)
T cd08220 221 -------------------------ISDRYSPDLRQLILSMLNLDPSKRPQLSQIMAQPIC 256 (256)
T ss_pred -------------------------CCCCcCHHHHHHHHHHccCChhhCCCHHHHhhCCCC
Confidence 112268889999999999999999999999999997
No 232
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=4.2e-42 Score=291.46 Aligned_cols=254 Identities=30% Similarity=0.535 Sum_probs=209.6
Q ss_pred cccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCCe
Q 035861 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHDS 91 (332)
Q Consensus 12 ~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 91 (332)
+|++.+.||.|++|.||++.+..++..+++|++......... ...+.+|++.++.++|+|++++.+.+... ..
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~------~~~~~~e~~~l~~l~~~~~~~~~~~~~~~-~~ 73 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKE------REDALNEVKILKKLNHPNIIKYYESFEEK-GK 73 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHH------HHHHHHHHHHHHhcCCCChhheEEEEecC-CE
Confidence 588999999999999999999989999999999765432111 12456899999999999999999998555 88
Q ss_pred EEEEcccccc-cHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeeccccccc
Q 035861 92 VYMVMEYMEH-DLKWLMESM---KQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQY 167 (332)
Q Consensus 92 ~~lv~e~~~~-~l~~~~~~~---~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~ 167 (332)
.++|+|+++| ++.+.+... ...+++..+..++.+++.||++||+.|++|+||+|+||+++.++.++|+|||.+...
T Consensus 74 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~ 153 (258)
T cd08215 74 LCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLTSNGLVKLGDFGISKVL 153 (258)
T ss_pred EEEEEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEEcCCCcEEECCccceeec
Confidence 9999999987 455555443 377999999999999999999999999999999999999999999999999998876
Q ss_pred CCCCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCC
Q 035861 168 GSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSE 247 (332)
Q Consensus 168 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (332)
...........++..|+|||.+.. ..++.++|+||+|+++|++++|..||.................
T Consensus 154 ~~~~~~~~~~~~~~~y~~pe~~~~-~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~------------ 220 (258)
T cd08215 154 SSTVDLAKTVVGTPYYLSPELCQN-KPYNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKILKGQY------------ 220 (258)
T ss_pred ccCcceecceeeeecccChhHhcc-CCCCccccHHHHHHHHHHHHcCCCCCCCCcHHHHHHHHhcCCC------------
Confidence 544333344577889999998876 5688999999999999999999999987765544444332110
Q ss_pred CccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCC
Q 035861 248 LPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWF 309 (332)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f 309 (332)
...+..++..+.+++.+||..+|++||+++++|+||||
T Consensus 221 ------------------------~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 258 (258)
T cd08215 221 ------------------------PPIPSQYSSELRNLVSSLLQKDPEERPSIAQILQSPFI 258 (258)
T ss_pred ------------------------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHhcCCCC
Confidence 01112378899999999999999999999999999997
No 233
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=4.4e-42 Score=296.69 Aligned_cols=260 Identities=28% Similarity=0.467 Sum_probs=209.0
Q ss_pred cccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCCe
Q 035861 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHDS 91 (332)
Q Consensus 12 ~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 91 (332)
.|+-...||+|++|.||++....+++.+|+|.+....... ...+.+|+..++.++|+|++++++.+..+ ..
T Consensus 21 ~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~--------~~~~~~e~~~l~~l~h~~iv~~~~~~~~~-~~ 91 (292)
T cd06657 21 YLDNFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQR--------RELLFNEVVIMRDYQHENVVEMYNSYLVG-DE 91 (292)
T ss_pred HhhhHHHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhH--------HHHHHHHHHHHHhcCCcchhheeeEEEeC-CE
Confidence 4455678999999999999999999999999875432111 12456899999999999999999998554 78
Q ss_pred EEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCCCC
Q 035861 92 VYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPL 171 (332)
Q Consensus 92 ~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~~~ 171 (332)
.+++|||++++.+..+.. ...+++..+..++.|++.||++||+.|++|+||+|+||+++.++.++|+|||.+.......
T Consensus 92 ~~lv~e~~~~~~L~~~~~-~~~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~ 170 (292)
T cd06657 92 LWVVMEFLEGGALTDIVT-HTRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV 170 (292)
T ss_pred EEEEEecCCCCcHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEcccccceeccccc
Confidence 999999999876665554 4568999999999999999999999999999999999999999999999999887654332
Q ss_pred CCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCCccc
Q 035861 172 KPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGA 251 (332)
Q Consensus 172 ~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (332)
.......++..|+|||.+.. ..++.++|+||+|+++|++++|..||......+....+........
T Consensus 171 ~~~~~~~~~~~y~~pE~~~~-~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~------------- 236 (292)
T cd06657 171 PRRKSLVGTPYWMAPELISR-LPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPKL------------- 236 (292)
T ss_pred ccccccccCccccCHHHhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhCCccc-------------
Confidence 22334567888999998875 6678999999999999999999999987665544433322211000
Q ss_pred cccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCCCCC
Q 035861 252 KANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVPLPK 316 (332)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~~ 316 (332)
.....++..+.+++.+||+.+|.+||+++++++||||...-.++
T Consensus 237 ---------------------~~~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~~~~~~~~~~~~ 280 (292)
T cd06657 237 ---------------------KNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPPS 280 (292)
T ss_pred ---------------------CCcccCCHHHHHHHHHHHhCCcccCcCHHHHhcChHHhccCCCc
Confidence 00122678899999999999999999999999999999977543
No 234
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=4.4e-43 Score=279.78 Aligned_cols=263 Identities=26% Similarity=0.454 Sum_probs=218.5
Q ss_pred cchhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhC-CCCCeeeeeeeEE
Q 035861 8 RSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSF-DHPSIVNVKEVVM 86 (332)
Q Consensus 8 ~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~ 86 (332)
..+++.+.+..||.|+.|+|+++..+.+|...|||.++......+. .+|+..+.++... .+|+|++++|+|+
T Consensus 89 ~dindl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~-------kRILmDldvv~~s~dcpyIV~c~GyFi 161 (391)
T KOG0983|consen 89 ADINDLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEEN-------KRILMDLDVVLKSHDCPYIVQCFGYFI 161 (391)
T ss_pred cChHHhhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHH-------HHHHHhhhHHhhccCCCeeeeeeeEEe
Confidence 3567888999999999999999999999999999999876543321 2566777777655 5899999999998
Q ss_pred cCCCeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH-HCCcccccCCCCCEEEcCCCcEEEeeccccc
Q 035861 87 DDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLH-DNWVLHRDLKTSNLLLNNQGVLKICDFGMSR 165 (332)
Q Consensus 87 ~~~~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh-~~~i~H~di~p~Nili~~~~~~~l~df~~~~ 165 (332)
.+ ...+|.||.+..-....+....++++|..+-++...+..||.||. ++||+|+|+||+|||+|..|++||+|||.+.
T Consensus 162 ~n-~dV~IcMelMs~C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~GniKlCDFGIsG 240 (391)
T KOG0983|consen 162 TN-TDVFICMELMSTCAEKLLKRIKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGNIKLCDFGISG 240 (391)
T ss_pred eC-chHHHHHHHHHHHHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEccCCCEEeecccccc
Confidence 77 557788999987667777777889999999999999999999999 5789999999999999999999999999998
Q ss_pred ccCCCCCCCccccccccccchhhhcCC--CCCCchhHHHHHHHHHHHHHhCCCCCCCC-ChHHHHHHHHHHcCCCCCCcc
Q 035861 166 QYGSPLKPYTSLVVTLWYRAPELLLGA--KKYSTAVDMWSVGCIMAELLAKKPLFSGT-TEVDQIDKIFKTLGTPTETIW 242 (332)
Q Consensus 166 ~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~sDi~slG~~l~~lltg~~pf~~~-~~~~~~~~~~~~~~~~~~~~~ 242 (332)
..... .......|.+.|||||.+... ..|+.++|+||||+.++|++||..||... .+.+.+..+.+..++
T Consensus 241 rlvdS-kAhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln~ePP------ 313 (391)
T KOG0983|consen 241 RLVDS-KAHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLNEEPP------ 313 (391)
T ss_pred eeecc-cccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHhcCCC------
Confidence 76443 334556788899999998642 46888999999999999999999999874 566777777663321
Q ss_pred cCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCC
Q 035861 243 PGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVP 313 (332)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~ 313 (332)
.+......|+.+++|+..||.+|+.+||.-.++|+|||+..-+
T Consensus 314 ----------------------------~L~~~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h~Fi~~ye 356 (391)
T KOG0983|consen 314 ----------------------------LLPGHMGFSPDFQSFVKDCLTKDHRKRPKYNKLLEHPFIKRYE 356 (391)
T ss_pred ----------------------------CCCcccCcCHHHHHHHHHHhhcCcccCcchHHHhcCcceeecc
Confidence 1112223799999999999999999999999999999988755
No 235
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=1e-41 Score=293.90 Aligned_cols=279 Identities=44% Similarity=0.810 Sum_probs=212.4
Q ss_pred ccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhC---CCCCeeeeeeeEEcCC
Q 035861 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSF---DHPSIVNVKEVVMDDH 89 (332)
Q Consensus 13 y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l---~h~~i~~~~~~~~~~~ 89 (332)
|++.+.||.|++|.||+|++..++..+|+|++........ ....+.+|+.+++++ .|+|++++++.+...+
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~------~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~ 74 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEG------IPLSTLREIALLKQLESFEHPNIVRLLDVCHGPR 74 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccch------hhhhHHHHHHHHHHhhccCCCCcceEEEEEeecc
Confidence 7889999999999999999998899999999975433211 111344677766655 6999999999986543
Q ss_pred C----eEEEEcccccccHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccc
Q 035861 90 D----SVYMVMEYMEHDLKWLMESMK-QPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMS 164 (332)
Q Consensus 90 ~----~~~lv~e~~~~~l~~~~~~~~-~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~ 164 (332)
. ..++++|++++++.+.+.... ..+++..++.++.|++.||++||+.|++|+||+|+||+++.++.++|+|||.+
T Consensus 75 ~~~~~~~~l~~e~~~~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili~~~~~~~l~dfg~~ 154 (287)
T cd07838 75 TDRELKLTLVFEHVDQDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVTSDGQVKIADFGLA 154 (287)
T ss_pred CCCCceeEEEehhcccCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEEccCCCEEEeccCcc
Confidence 2 389999999998777665533 36899999999999999999999999999999999999999999999999998
Q ss_pred cccCCCCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccC
Q 035861 165 RQYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPG 244 (332)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (332)
....... ......++..|+|||.+.+ ..++.++|+||||+++|+|++|..||......+...++......+....++.
T Consensus 155 ~~~~~~~-~~~~~~~~~~~~~PE~~~~-~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (287)
T cd07838 155 RIYSFEM-ALTSVVVTLWYRAPEVLLQ-SSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPR 232 (287)
T ss_pred eeccCCc-ccccccccccccChHHhcc-CCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcCC
Confidence 7764332 2233456888999999977 6689999999999999999999999998888877777776544433222211
Q ss_pred CCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCC
Q 035861 245 LSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWF 309 (332)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f 309 (332)
....... ..............+.++..+.++|.+||+.||.+||++++++.||||
T Consensus 233 ~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~~~~ 287 (287)
T cd07838 233 NVSLPRS----------SFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQHPYF 287 (287)
T ss_pred Ccccchh----------hcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcCcCC
Confidence 1100000 000000011111123467888999999999999999999999999998
No 236
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=1.2e-41 Score=297.49 Aligned_cols=258 Identities=28% Similarity=0.472 Sum_probs=211.8
Q ss_pred hcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCC
Q 035861 11 FEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHD 90 (332)
Q Consensus 11 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 90 (332)
..|+..+.||+|+||.||++++..++..+++|.+.......... ...+..|+..++.++|+|++++++++..+ .
T Consensus 25 ~~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~-----~~~~~~e~~~l~~l~h~~iv~~~~~~~~~-~ 98 (317)
T cd06635 25 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEK-----WQDIIKEVKFLQRIKHPNSIEYKGCYLRE-H 98 (317)
T ss_pred hhhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHH-----HHHHHHHHHHHHhCCCCCEEEEEEEEeeC-C
Confidence 45889999999999999999999899999999986542221111 12467899999999999999999998555 7
Q ss_pred eEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCCC
Q 035861 91 SVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSP 170 (332)
Q Consensus 91 ~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~~ 170 (332)
..++||||+.|++.+.+.....++++..+..++.|++.||.+||++|++|+||+|+||+++.++.++|+|||.+.....
T Consensus 99 ~~~lv~e~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~- 177 (317)
T cd06635 99 TAWLVMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASIASP- 177 (317)
T ss_pred eEEEEEeCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEECCCCCEEEecCCCccccCC-
Confidence 7899999999988887776677899999999999999999999999999999999999999999999999998865432
Q ss_pred CCCCccccccccccchhhhc--CCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCC
Q 035861 171 LKPYTSLVVTLWYRAPELLL--GAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSEL 248 (332)
Q Consensus 171 ~~~~~~~~~~~~y~aPE~~~--~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (332)
.....++..|+|||.+. ....++.++|+||||+++|+|++|..||...........+........
T Consensus 178 ---~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~---------- 244 (317)
T cd06635 178 ---ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPTL---------- 244 (317)
T ss_pred ---cccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhccCCCC----------
Confidence 23446788899999974 235688999999999999999999999987765555554443211110
Q ss_pred ccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCC
Q 035861 249 PGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVP 313 (332)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~ 313 (332)
....++..+++|+.+||+.+|.+||++.++++|+|+....
T Consensus 245 -------------------------~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~ 284 (317)
T cd06635 245 -------------------------QSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVLRER 284 (317)
T ss_pred -------------------------CCccccHHHHHHHHHHccCCcccCcCHHHHHhChhhhccC
Confidence 1122677899999999999999999999999999997644
No 237
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=4.6e-42 Score=295.66 Aligned_cols=262 Identities=25% Similarity=0.386 Sum_probs=207.6
Q ss_pred hhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCC
Q 035861 10 VFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDH 89 (332)
Q Consensus 10 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 89 (332)
.++|++++.||+|++|+||++.+..++..+++|++....... ....+.+|+++++.++||||+++++.+...
T Consensus 4 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~-------~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~- 75 (284)
T cd06620 4 NEDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSS-------VRKQILRELQIMHECRSPYIVSFYGAFLNE- 75 (284)
T ss_pred HHHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcch-------HHHHHHHHHHHHHHcCCCCcceEeeeEecC-
Confidence 468999999999999999999999999999999886532111 122567899999999999999999999555
Q ss_pred CeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH-CCcccccCCCCCEEEcCCCcEEEeecccccccC
Q 035861 90 DSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHD-NWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYG 168 (332)
Q Consensus 90 ~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~-~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~ 168 (332)
...++|+||++++.++.+....+.+++..+..++.+++.||.|||+ .|++|+||+|+||+++.++.++|+|||++....
T Consensus 76 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~ 155 (284)
T cd06620 76 NNICMCMEFMDCGSLDRIYKKGGPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELI 155 (284)
T ss_pred CEEEEEEecCCCCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEECCCCcEEEccCCcccchh
Confidence 7899999999987666665556789999999999999999999996 699999999999999999999999999886542
Q ss_pred CCCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH----HH---HHHHHcCCCCCCc
Q 035861 169 SPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQ----ID---KIFKTLGTPTETI 241 (332)
Q Consensus 169 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~----~~---~~~~~~~~~~~~~ 241 (332)
... .....++..|+|||++.+ ..++.++|+||||+++|++++|..||........ .. .........
T Consensus 156 ~~~--~~~~~~~~~~~aPE~~~~-~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 228 (284)
T cd06620 156 NSI--ADTFVGTSTYMSPERIQG-GKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQE---- 228 (284)
T ss_pred hhc--cCccccCcccCCHHHHcc-CCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhc----
Confidence 221 124468889999999876 5788999999999999999999999986543210 00 111100000
Q ss_pred ccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCC
Q 035861 242 WPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVP 313 (332)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~ 313 (332)
.........++..+.+|+.+||+.||++||++.|+++|+||.+-.
T Consensus 229 ---------------------------~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~~~~~ 273 (284)
T cd06620 229 ---------------------------PPPRLPSSDFPEDLRDFVDACLLKDPTERPTPQQLCAMPPFIQAL 273 (284)
T ss_pred ---------------------------cCCCCCchhcCHHHHHHHHHHhcCCcccCcCHHHHhcCccccccc
Confidence 000000112677899999999999999999999999999997744
No 238
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=100.00 E-value=7.8e-42 Score=297.50 Aligned_cols=262 Identities=27% Similarity=0.450 Sum_probs=212.1
Q ss_pred ccchhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEE
Q 035861 7 CRSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVM 86 (332)
Q Consensus 7 ~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~ 86 (332)
..-...|+..+.||.|++|+||+|++..++..+++|.+.......... ...+.+|+..++.++|+|++++.+++.
T Consensus 11 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~-----~~~~~~e~~~l~~l~h~~i~~~~~~~~ 85 (308)
T cd06634 11 DDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEK-----WQDIIKEVRFLQKLRHPNTIQYRGCYL 85 (308)
T ss_pred CCcHHHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHH-----HHHHHHHHHHHHhCCCCCcccEEEEEE
Confidence 334557999999999999999999999899999999986432211111 114568999999999999999999985
Q ss_pred cCCCeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccc
Q 035861 87 DDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQ 166 (332)
Q Consensus 87 ~~~~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~ 166 (332)
.. ...++|+||+.|++.+.+......+++..+..++.|++.||.+||+.|++|+||+|+||+++.++.++|+|||.+..
T Consensus 86 ~~-~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~ 164 (308)
T cd06634 86 RE-HTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASI 164 (308)
T ss_pred cC-CeeEEEEEccCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEECCCCcEEECCccccee
Confidence 55 78899999999988887776677799999999999999999999999999999999999999999999999998876
Q ss_pred cCCCCCCCccccccccccchhhhcC--CCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccC
Q 035861 167 YGSPLKPYTSLVVTLWYRAPELLLG--AKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPG 244 (332)
Q Consensus 167 ~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (332)
.... ....++..|+|||.+.. ....+.++|+||||+++|++++|..||...+.......+......
T Consensus 165 ~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~-------- 232 (308)
T cd06634 165 MAPA----NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESP-------- 232 (308)
T ss_pred ecCc----ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHHHHHhhcCCC--------
Confidence 5322 34457888999999752 245788999999999999999999999776544433333221100
Q ss_pred CCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCC
Q 035861 245 LSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVP 313 (332)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~ 313 (332)
......++..+.+||.+||+.+|++||+++++++|||+..-.
T Consensus 233 ---------------------------~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~~~~~~ 274 (308)
T cd06634 233 ---------------------------ALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRER 274 (308)
T ss_pred ---------------------------CcCcccccHHHHHHHHHHhhCCcccCCCHHHHhhCccccccC
Confidence 001223688899999999999999999999999999999843
No 239
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=1.1e-41 Score=288.42 Aligned_cols=254 Identities=30% Similarity=0.522 Sum_probs=209.8
Q ss_pred cccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCCe
Q 035861 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHDS 91 (332)
Q Consensus 12 ~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 91 (332)
+|++.+.||+|++|.||++++..+++.|++|.+......... ...+.+|++.+++++|+|++++.+.+.+. ..
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~------~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-~~ 73 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEA------LKSIMQEIDLLKNLKHPNIVKYIGSIETS-DS 73 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHH------HHHHHHHHHHHHhCCCCCccEEEEEEEeC-CE
Confidence 588999999999999999999988999999999765432111 12567899999999999999999998554 78
Q ss_pred EEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCCCC
Q 035861 92 VYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPL 171 (332)
Q Consensus 92 ~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~~~ 171 (332)
.++++|+++++.+.........+++..++.++.|++.||.+||+.|++|+||+|+||+++.++.++|+|||.+.......
T Consensus 74 ~~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~ 153 (254)
T cd06627 74 LYIILEYAENGSLRQIIKKFGPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTTKDGVVKLADFGVATKLNDVS 153 (254)
T ss_pred EEEEEecCCCCcHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEECCCCCEEEeccccceecCCCc
Confidence 99999999986555555556789999999999999999999999999999999999999999999999999998775544
Q ss_pred CCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCCccc
Q 035861 172 KPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGA 251 (332)
Q Consensus 172 ~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (332)
.......++..|+|||.+.. ..++.++|+||||+++|++++|..||..........+.....
T Consensus 154 ~~~~~~~~~~~y~~pe~~~~-~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~----------------- 215 (254)
T cd06627 154 KDDASVVGTPYWMAPEVIEM-SGASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIVQDD----------------- 215 (254)
T ss_pred ccccccccchhhcCHhhhcC-CCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhccC-----------------
Confidence 43445677889999999876 458899999999999999999999997765443333322110
Q ss_pred cccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCC
Q 035861 252 KANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWF 309 (332)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f 309 (332)
....+..++..+.+++.+||..+|++||++.+++.||||
T Consensus 216 -------------------~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~~ 254 (254)
T cd06627 216 -------------------HPPLPEGISPELKDFLMQCFQKDPNLRPTAKQLLKHPWI 254 (254)
T ss_pred -------------------CCCCCCCCCHHHHHHHHHHHhCChhhCcCHHHHhcCCCC
Confidence 001122368899999999999999999999999999998
No 240
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=1.1e-41 Score=290.61 Aligned_cols=250 Identities=23% Similarity=0.393 Sum_probs=195.1
Q ss_pred chhcccccccc--cccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhC-CCCCeeeeeeeE
Q 035861 9 SVFEFEKLNKI--SEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSF-DHPSIVNVKEVV 85 (332)
Q Consensus 9 ~~~~y~~~~~l--g~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~ 85 (332)
..++|++.+.+ |.|+||.||++....++..+++|.+....... .|+.....+ +|+|++++++.+
T Consensus 12 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~-------------~e~~~~~~~~~h~~iv~~~~~~ 78 (267)
T PHA03390 12 FLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA-------------IEPMVHQLMKDNPNFIKLYYSV 78 (267)
T ss_pred HHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch-------------hhHHHHHHhhcCCCEEEEEEEE
Confidence 34577777777 99999999999999999999999987543211 122222222 799999999999
Q ss_pred EcCCCeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCC-cEEEeecccc
Q 035861 86 MDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQG-VLKICDFGMS 164 (332)
Q Consensus 86 ~~~~~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~-~~~l~df~~~ 164 (332)
..+ ...++||||++|+.+.........+++..+..++.|++.||++||+.|++|+||+|+||+++.++ .++|+|||.+
T Consensus 79 ~~~-~~~~iv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~l~dfg~~ 157 (267)
T PHA03390 79 TTL-KGHVLIMDYIKDGDLFDLLKKEGKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDRAKDRIYLCDYGLC 157 (267)
T ss_pred ecC-CeeEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeCCCCeEEEecCccc
Confidence 555 68999999998654444444456899999999999999999999999999999999999999998 9999999988
Q ss_pred cccCCCCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHH-HHHHHHcCCCCCCccc
Q 035861 165 RQYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQI-DKIFKTLGTPTETIWP 243 (332)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~-~~~~~~~~~~~~~~~~ 243 (332)
...... ....++..|+|||++.. ..++.++|+||+|+++|++++|..||......... ........
T Consensus 158 ~~~~~~----~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~-------- 224 (267)
T PHA03390 158 KIIGTP----SCYDGTLDYFSPEKIKG-HNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQQ-------- 224 (267)
T ss_pred eecCCC----ccCCCCCcccChhhhcC-CCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhhc--------
Confidence 765432 23357888999999976 56889999999999999999999999755433211 11111110
Q ss_pred CCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCC-HHHHhcCCCCCC
Q 035861 244 GLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRIT-VDDALNHYWFHE 311 (332)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps-~~ell~hp~f~~ 311 (332)
......+.+++.+.+||.+||+.+|.+||+ ++++|+||||.+
T Consensus 225 --------------------------~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~h~~~~~ 267 (267)
T PHA03390 225 --------------------------KKLPFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIKHPFLKI 267 (267)
T ss_pred --------------------------ccCCcccccCHHHHHHHHHHhccChhhCCchHHHHhcCCcccC
Confidence 001111237899999999999999999996 699999999974
No 241
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=9.9e-42 Score=291.16 Aligned_cols=255 Identities=30% Similarity=0.429 Sum_probs=197.2
Q ss_pred cccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCCe
Q 035861 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHDS 91 (332)
Q Consensus 12 ~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 91 (332)
.......||+|+||.||+|.+..++..|++|.+........ ..+.+|+.++++++|+||+++++.+..+ ..
T Consensus 9 ~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~--------~~~~~e~~~l~~l~h~~iv~~~~~~~~~-~~ 79 (268)
T cd06624 9 ENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYV--------QPLHEEIALHSYLKHRNIVQYLGSDSEN-GF 79 (268)
T ss_pred cCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHH--------HHHHHHHHHHHhcCCCCeeeeeeeeccC-CE
Confidence 34445689999999999999998899999998865432111 1456899999999999999999998544 78
Q ss_pred EEEEccccccc-HHHHHHhcCCCC--CHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcC-CCcEEEeeccccccc
Q 035861 92 VYMVMEYMEHD-LKWLMESMKQPF--STSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNN-QGVLKICDFGMSRQY 167 (332)
Q Consensus 92 ~~lv~e~~~~~-l~~~~~~~~~~l--~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~-~~~~~l~df~~~~~~ 167 (332)
.++++|+++|+ +.+.+......+ ++..+..++.||+.||+|||++|++|+||+|+||+++. ++.++|+|||.+...
T Consensus 80 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~ 159 (268)
T cd06624 80 FKIFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRL 159 (268)
T ss_pred EEEEEecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCeEEEecchhheec
Confidence 99999999864 555554434556 88899999999999999999999999999999999986 679999999998765
Q ss_pred CCCCCCCccccccccccchhhhcCC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCC
Q 035861 168 GSPLKPYTSLVVTLWYRAPELLLGA-KKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLS 246 (332)
Q Consensus 168 ~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (332)
...........++..|+|||.+... ..++.++|+||+|+++|++++|..||................
T Consensus 160 ~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~~~~~------------ 227 (268)
T cd06624 160 AGINPCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVGMF------------ 227 (268)
T ss_pred ccCCCccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhhhhhh------------
Confidence 4322333344578899999998653 347889999999999999999999997543221111000000
Q ss_pred CCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCC
Q 035861 247 ELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWF 309 (332)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f 309 (332)
......+..+++++++|+.+||+.+|++||++.+++.||||
T Consensus 228 ----------------------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~ 268 (268)
T cd06624 228 ----------------------KIHPEIPESLSAEAKNFILRCFEPDPDKRASAHDLLQDPFL 268 (268)
T ss_pred ----------------------ccCCCCCcccCHHHHHHHHHHcCCCchhCCCHHHHHhCCCC
Confidence 00001122368889999999999999999999999999997
No 242
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=6.9e-42 Score=291.94 Aligned_cols=255 Identities=27% Similarity=0.442 Sum_probs=200.6
Q ss_pred hhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCC
Q 035861 10 VFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDH 89 (332)
Q Consensus 10 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 89 (332)
+++|++.+.||.|++|.||+|++..+++.||||.+.......... ...+.+|+..++.++|||++++++.+...
T Consensus 1 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~-----~~~~~~e~~~l~~l~h~~i~~~~~~~~~~- 74 (267)
T cd08228 1 LANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKA-----RQDCVKEIDLLKQLNHPNVIKYLDSFIED- 74 (267)
T ss_pred CcceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHH-----HHHHHHHHHHHHhCCCcceeeeeeeEEEC-
Confidence 358999999999999999999999999999999886533222111 12456899999999999999999998554
Q ss_pred CeEEEEccccccc-HHHHHH---hcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeeccccc
Q 035861 90 DSVYMVMEYMEHD-LKWLME---SMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSR 165 (332)
Q Consensus 90 ~~~~lv~e~~~~~-l~~~~~---~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~ 165 (332)
...++++||++++ +.+.+. .....+++..+..++.|++.||+|||++|++|+||+|+||+++.++.++|+|||.+.
T Consensus 75 ~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~~~~~~~~l~d~g~~~ 154 (267)
T cd08228 75 NELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGR 154 (267)
T ss_pred CeEEEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEEcCCCCEEECccccce
Confidence 7889999999974 433332 234568999999999999999999999999999999999999999999999999887
Q ss_pred ccCCCCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCh--HHHHHHHHHHcCCCCCCccc
Q 035861 166 QYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTE--VDQIDKIFKTLGTPTETIWP 243 (332)
Q Consensus 166 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~--~~~~~~~~~~~~~~~~~~~~ 243 (332)
.............++..|+|||.+.+ ..++.++|+||+|+++|+|++|..||..... ......+ .....++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~aPE~~~~-~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~~-~~~~~~~----- 227 (267)
T cd08228 155 FFSSKTTAAHSLVGTPYYMSPERIHE-NGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKI-EQCDYPP----- 227 (267)
T ss_pred eccchhHHHhcCCCCccccChhhhcc-CCCCchhhHHHHHHHHHHHhcCCCCCccccccHHHHHHHH-hcCCCCC-----
Confidence 66443333334567889999999876 5688999999999999999999999865432 2222221 1111110
Q ss_pred CCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcC
Q 035861 244 GLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNH 306 (332)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 306 (332)
.....++..+.+++.+||+.+|++||+++++++.
T Consensus 228 -----------------------------~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~ 261 (267)
T cd08228 228 -----------------------------LPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQI 261 (267)
T ss_pred -----------------------------CChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHH
Confidence 0112267889999999999999999999999863
No 243
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=8.3e-42 Score=294.38 Aligned_cols=260 Identities=29% Similarity=0.490 Sum_probs=211.8
Q ss_pred cchhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEc
Q 035861 8 RSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMD 87 (332)
Q Consensus 8 ~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~ 87 (332)
..-+.|++...||.|++|.||+|.+..++..+++|++..... . ...+.+|++.+++++|+|++++++.+..
T Consensus 16 ~~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~--------~~~~~~e~~~l~~l~~~~i~~~~~~~~~ 86 (286)
T cd06614 16 DPRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-N--------KELIINEILIMKDCKHPNIVDYYDSYLV 86 (286)
T ss_pred CccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-h--------HHHHHHHHHHHHHCCCCCeeEEEEEEEE
Confidence 345679999999999999999999998899999999975433 0 1145689999999999999999999866
Q ss_pred CCCeEEEEcccccc-cHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccc
Q 035861 88 DHDSVYMVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQ 166 (332)
Q Consensus 88 ~~~~~~lv~e~~~~-~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~ 166 (332)
+ ...++++||++| ++.+.+......+++..+..++.|++.||++||+.|++|+||+|+||+++.++.++|+|||.+..
T Consensus 87 ~-~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~ 165 (286)
T cd06614 87 G-DELWVVMEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLSKDGSVKLADFGFAAQ 165 (286)
T ss_pred C-CEEEEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEEcCCCCEEECccchhhh
Confidence 5 889999999996 45555444333899999999999999999999999999999999999999999999999998876
Q ss_pred cCCCCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCC
Q 035861 167 YGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLS 246 (332)
Q Consensus 167 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (332)
............++..|+|||.+.+ ..++.++|+||||+++|++++|..||...+.......+......
T Consensus 166 ~~~~~~~~~~~~~~~~y~~PE~~~~-~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~~~~~~~~---------- 234 (286)
T cd06614 166 LTKEKSKRNSVVGTPYWMAPEVIKR-KDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLITTKGIP---------- 234 (286)
T ss_pred hccchhhhccccCCcccCCHhHhcC-CCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCC----------
Confidence 5443333344567788999999876 66899999999999999999999999876655444433221100
Q ss_pred CCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCC
Q 035861 247 ELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEV 312 (332)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~ 312 (332)
.......++..+.+||.+||+.+|.+||++.++++|+||.+.
T Consensus 235 ------------------------~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~ 276 (286)
T cd06614 235 ------------------------PLKNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQHPFLKKA 276 (286)
T ss_pred ------------------------CCcchhhCCHHHHHHHHHHhccChhhCcCHHHHhhChHhhcc
Confidence 011112267889999999999999999999999999999983
No 244
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=5.3e-42 Score=292.50 Aligned_cols=251 Identities=20% Similarity=0.261 Sum_probs=198.7
Q ss_pred hhcccccccccccCcEEEEEEEEC---CCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEE
Q 035861 10 VFEFEKLNKISEGTYGIVYRARDK---KSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVM 86 (332)
Q Consensus 10 ~~~y~~~~~lg~g~~g~v~~~~~~---~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~ 86 (332)
..+|++.+.||+|+||.||+|.++ ..+..||+|.+........ ...+.+|+..+++++||||+++++.+.
T Consensus 4 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~-------~~~~~~e~~~l~~l~h~~iv~~~~~~~ 76 (266)
T cd05064 4 NKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQ-------RRGFLAEALTLGQFDHSNIVRLEGVIT 76 (266)
T ss_pred hHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHH-------HHHHHHHHHHHhcCCCCCcCeEEEEEe
Confidence 468999999999999999999875 3466899999875422111 124678999999999999999999985
Q ss_pred cCCCeEEEEcccccccHHHHH-HhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeeccccc
Q 035861 87 DDHDSVYMVMEYMEHDLKWLM-ESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSR 165 (332)
Q Consensus 87 ~~~~~~~lv~e~~~~~l~~~~-~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~ 165 (332)
. ....++||||++++.++.+ ......+++..++.++.||+.||+|||+.|++|+||+|+||+++.++.++++|||.+.
T Consensus 77 ~-~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili~~~~~~~l~dfg~~~ 155 (266)
T cd05064 77 R-GNTMMIVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLVNSDLVCKISGFRRLQ 155 (266)
T ss_pred c-CCCcEEEEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEEcCCCcEEECCCcccc
Confidence 4 4789999999998655544 4435679999999999999999999999999999999999999999999999999765
Q ss_pred ccCCCCC-CCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCCCCCCccc
Q 035861 166 QYGSPLK-PYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA-KKPLFSGTTEVDQIDKIFKTLGTPTETIWP 243 (332)
Q Consensus 166 ~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (332)
....... ......++..|+|||.+.. ..++.++|+||||+++|++++ |..||......+....+.....
T Consensus 156 ~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~~-------- 226 (266)
T cd05064 156 EDKSEAIYTTMSGKSPVLWAAPEAIQY-HHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDVIKAVEDGFR-------- 226 (266)
T ss_pred cccccchhcccCCCCceeecCHHHHhh-CCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCCC--------
Confidence 4322111 1112234567999999876 678999999999999999775 9999988776655554432211
Q ss_pred CCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhc
Q 035861 244 GLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALN 305 (332)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 305 (332)
...++.++..+.+++.+||+.+|++||++++|++
T Consensus 227 ----------------------------~~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~ 260 (266)
T cd05064 227 ----------------------------LPAPRNCPNLLHQLMLDCWQKERGERPRFSQIHS 260 (266)
T ss_pred ----------------------------CCCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHH
Confidence 1112336888999999999999999999999875
No 245
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-43 Score=300.60 Aligned_cols=278 Identities=25% Similarity=0.393 Sum_probs=226.1
Q ss_pred chhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcC
Q 035861 9 SVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDD 88 (332)
Q Consensus 9 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 88 (332)
..+.|.+.+.||+|+||.||-++.+.||+-||.|.+.+.......- ..-.++|..+|.+++.+.|+.+-..+ +.
T Consensus 183 t~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~g-----e~maLnEk~iL~kV~s~FiVslaYAf-eT 256 (591)
T KOG0986|consen 183 TKNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKG-----ETMALNEKQILEKVSSPFIVSLAYAF-ET 256 (591)
T ss_pred cccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhh-----hHHhhHHHHHHHHhccCcEEEEeeee-cC
Confidence 4568889999999999999999999999999999997765543322 22356899999999999998887777 66
Q ss_pred CCeEEEEcccccccHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccc
Q 035861 89 HDSVYMVMEYMEHDLKWLMESMK--QPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQ 166 (332)
Q Consensus 89 ~~~~~lv~e~~~~~l~~~~~~~~--~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~ 166 (332)
...+|+|+..++|+-+...+-+. ..+++..+..++.+|+.||++||+.+|++||+||+|||+|+.|++.|+|+|+|..
T Consensus 257 kd~LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILLDd~GhvRISDLGLAve 336 (591)
T KOG0986|consen 257 KDALCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILLDDHGHVRISDLGLAVE 336 (591)
T ss_pred CCceEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheeeccCCCeEeeccceEEe
Confidence 68899999999986555444333 4699999999999999999999999999999999999999999999999999988
Q ss_pred cCCCCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCC
Q 035861 167 YGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLS 246 (332)
Q Consensus 167 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (332)
... ..+.....||..|||||++.+ ..|+.+.|.|||||++|+|+.|..||.......-..++-+.....+.
T Consensus 337 i~~-g~~~~~rvGT~GYMAPEvl~n-e~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr~~~~~~------- 407 (591)
T KOG0986|consen 337 IPE-GKPIRGRVGTVGYMAPEVLQN-EVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRRTLEDPE------- 407 (591)
T ss_pred cCC-CCccccccCcccccCHHHHcC-CcccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHHHhcchh-------
Confidence 743 344556689999999999998 45999999999999999999999999876544333333222111111
Q ss_pred CCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCC-----CHHHHhcCCCCCCCCCCCCCC--
Q 035861 247 ELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRI-----TVDDALNHYWFHEVPLPKSKD-- 319 (332)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp-----s~~ell~hp~f~~~~~~~~~~-- 319 (332)
.-+...|+++++|.+.+|.+||.+|. .+.++-+||||++++|.....
T Consensus 408 --------------------------ey~~kFS~eakslc~~LL~Kdp~~RLGcrg~ga~evk~HpfFk~lnw~rleagm 461 (591)
T KOG0986|consen 408 --------------------------EYSDKFSEEAKSLCEGLLTKDPEKRLGCRGEGAQEVKEHPFFKDLNWRRLEAGM 461 (591)
T ss_pred --------------------------hcccccCHHHHHHHHHHHccCHHHhccCCCcCcchhhhCcccccCCHhHHhccC
Confidence 11233799999999999999999998 677999999999999998855
Q ss_pred CCCCCCCc
Q 035861 320 FMPTFPPQ 327 (332)
Q Consensus 320 ~~~~~~~~ 327 (332)
..|+|-|.
T Consensus 462 l~PPfiPd 469 (591)
T KOG0986|consen 462 LEPPFIPD 469 (591)
T ss_pred CCCCCCCC
Confidence 55666553
No 246
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=6.3e-42 Score=294.70 Aligned_cols=253 Identities=24% Similarity=0.384 Sum_probs=200.4
Q ss_pred chhcccccccccccCcEEEEEEEECCCC-----cEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeee
Q 035861 9 SVFEFEKLNKISEGTYGIVYRARDKKSG-----EIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKE 83 (332)
Q Consensus 9 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~-----~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~ 83 (332)
.+.+|++.+.||+|++|.||+|.....+ ..+++|.+....... ....+.+|+..+++++||||+++++
T Consensus 3 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~-------~~~~~~~ei~~l~~l~h~~i~~~~~ 75 (283)
T cd05048 3 PLSAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPK-------VQQEFRQEAELMSDLQHPNIVCLLG 75 (283)
T ss_pred ChHHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHH-------HHHHHHHHHHHHHhcCCcccceEEE
Confidence 3568999999999999999999986554 679999886432111 1124678999999999999999999
Q ss_pred eEEcCCCeEEEEcccccc-cHHHHHHhcC---------------CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCC
Q 035861 84 VVMDDHDSVYMVMEYMEH-DLKWLMESMK---------------QPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSN 147 (332)
Q Consensus 84 ~~~~~~~~~~lv~e~~~~-~l~~~~~~~~---------------~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~N 147 (332)
.+.. ....++++||+++ ++.+.+.... ..+++..+..++.|++.||+|||++|++|+||||+|
T Consensus 76 ~~~~-~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~N 154 (283)
T cd05048 76 VCTK-EQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARN 154 (283)
T ss_pred EEcC-CCceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccce
Confidence 9854 4778999999986 4544444321 458889999999999999999999999999999999
Q ss_pred EEEcCCCcEEEeecccccccCCCC--CCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChH
Q 035861 148 LLLNNQGVLKICDFGMSRQYGSPL--KPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA-KKPLFSGTTEV 224 (332)
Q Consensus 148 ili~~~~~~~l~df~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~llt-g~~pf~~~~~~ 224 (332)
|+++.++.++|+|||.+....... .......++..|+|||.+.+ ..++.++|+||||+++|+|++ |..||......
T Consensus 155 il~~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~ 233 (283)
T cd05048 155 CLVGEGLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILY-GKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQ 233 (283)
T ss_pred EEEcCCCcEEECCCcceeeccccccccccCCCcccccccCHHHhcc-CcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHH
Confidence 999999999999999987542211 12233456788999999876 568999999999999999998 99999887766
Q ss_pred HHHHHHHHHcCCCCCCcccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHh
Q 035861 225 DQIDKIFKTLGTPTETIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDAL 304 (332)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell 304 (332)
+....+...... ..+..++.++.+|+.+||+.||.+||++.+|+
T Consensus 234 ~~~~~i~~~~~~------------------------------------~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~ 277 (283)
T cd05048 234 EVIEMIRSRQLL------------------------------------PCPEDCPARVYALMIECWNEIPARRPRFKDIH 277 (283)
T ss_pred HHHHHHHcCCcC------------------------------------CCcccCCHHHHHHHHHHccCChhhCcCHHHHH
Confidence 555444322111 11223789999999999999999999999998
Q ss_pred cC
Q 035861 305 NH 306 (332)
Q Consensus 305 ~h 306 (332)
++
T Consensus 278 ~~ 279 (283)
T cd05048 278 TR 279 (283)
T ss_pred HH
Confidence 75
No 247
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=1.7e-41 Score=287.84 Aligned_cols=248 Identities=23% Similarity=0.394 Sum_probs=198.7
Q ss_pred hhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCC
Q 035861 10 VFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDH 89 (332)
Q Consensus 10 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 89 (332)
.++|++.+.||+|+||.||++.++. +..+|+|.+....... ..+.+|+..+++++||||+++++.+ ...
T Consensus 3 ~~~~~~~~~lg~G~~~~vy~~~~~~-~~~~a~K~~~~~~~~~---------~~~~~e~~~l~~l~h~~i~~~~~~~-~~~ 71 (256)
T cd05114 3 PSELTFMKELGSGQFGVVHLGKWRA-QIKVAIKAINEGAMSE---------EDFIEEAKVMMKLSHPKLVQLYGVC-TQQ 71 (256)
T ss_pred HHHcEEeeEecCCcCceEEEEEecc-CceEEEEecccCCccH---------HHHHHHHHHHHHCCCCCceeEEEEE-ccC
Confidence 5689999999999999999998864 5579999876432211 1466899999999999999999988 445
Q ss_pred CeEEEEcccccc-cHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccC
Q 035861 90 DSVYMVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYG 168 (332)
Q Consensus 90 ~~~~lv~e~~~~-~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~ 168 (332)
...++||||++| ++.+.+....+.+++..+..++.|++.||+|||++|++|+||+|+||+++.++.++|+|||.+....
T Consensus 72 ~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~ 151 (256)
T cd05114 72 KPLYIVTEFMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVL 151 (256)
T ss_pred CCEEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEEcCCCeEEECCCCCccccC
Confidence 789999999986 4555555445678999999999999999999999999999999999999999999999999887543
Q ss_pred CCCC-CCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCCCCCCcccCCC
Q 035861 169 SPLK-PYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA-KKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLS 246 (332)
Q Consensus 169 ~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (332)
.... ......++..|+|||.+.. ..++.++|+||+|+++|++++ |..||...+..+....+.......
T Consensus 152 ~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~i~~~~~~~--------- 221 (256)
T cd05114 152 DDEYTSSSGAKFPVKWSPPEVFNF-SKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRGFRLY--------- 221 (256)
T ss_pred CCceeccCCCCCchhhCChhhccc-CccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCCCC---------
Confidence 2211 1122234567999999876 678999999999999999999 899998877766666554321100
Q ss_pred CCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhc
Q 035861 247 ELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALN 305 (332)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 305 (332)
.+...+..+.+++.+||+.+|++||+++++++
T Consensus 222 ---------------------------~~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~ 253 (256)
T cd05114 222 ---------------------------RPKLASMTVYEVMYSCWHEKPEGRPTFAELLR 253 (256)
T ss_pred ---------------------------CCCCCCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 11125678899999999999999999999985
No 248
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=2.9e-42 Score=302.88 Aligned_cols=304 Identities=20% Similarity=0.283 Sum_probs=209.4
Q ss_pred ccccccc--CcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCCeEE
Q 035861 16 LNKISEG--TYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHDSVY 93 (332)
Q Consensus 16 ~~~lg~g--~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 93 (332)
...||.| ++|+||++++..+++.||+|++......... ...+.+|+.+++.++||||+++++++..+ ...+
T Consensus 3 ~~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~------~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~~ 75 (328)
T cd08226 3 QVEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEH------LKALQNEVVLSHFFRHPNIMTSWTVFTTG-SWLW 75 (328)
T ss_pred HHHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHH------HHHHHHHHHHHHhCCCCCcceEeeeEecC-CceE
Confidence 3567777 9999999999999999999998754322211 12466888999999999999999999554 7789
Q ss_pred EEcccccc-cHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCCCC
Q 035861 94 MVMEYMEH-DLKWLMESM-KQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPL 171 (332)
Q Consensus 94 lv~e~~~~-~l~~~~~~~-~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~~~ 171 (332)
+|+|++.+ ++.+.+... ...+++..+..++.|++.||+|||++|++|+||||+||+++.++.++++||+.+.......
T Consensus 76 ~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~ 155 (328)
T cd08226 76 VISPFMAYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNG 155 (328)
T ss_pred EEEecccCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccC
Confidence 99999996 444444432 2458999999999999999999999999999999999999999999999997553321111
Q ss_pred CC-------CccccccccccchhhhcCC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCccc
Q 035861 172 KP-------YTSLVVTLWYRAPELLLGA-KKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWP 243 (332)
Q Consensus 172 ~~-------~~~~~~~~~y~aPE~~~~~-~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (332)
.. .....++..|+|||++.+. ..++.++|+||||+++|++++|..||...................+.....
T Consensus 156 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (328)
T cd08226 156 QKAKVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITT 235 (328)
T ss_pred ccccccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccc
Confidence 11 0112235569999998753 347899999999999999999999998776554444333321111110000
Q ss_pred C-CCCCccccc--ccc-CCchhhhhh----hC--CCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCC
Q 035861 244 G-LSELPGAKA--NFA-KQPYNLLRK----RF--PAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVP 313 (332)
Q Consensus 244 ~-~~~~~~~~~--~~~-~~~~~~~~~----~~--~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~ 313 (332)
. ......... ... ......... .. ..........++..+++||++||+.||++|||++|+|+||||.++.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~~~~~ 315 (328)
T cd08226 236 FPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAFFKQVK 315 (328)
T ss_pred cchhhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHHHHHHH
Confidence 0 000000000 000 000000000 00 0001111234678899999999999999999999999999999998
Q ss_pred CCCCCCCCCCCCC
Q 035861 314 LPKSKDFMPTFPP 326 (332)
Q Consensus 314 ~~~~~~~~~~~~~ 326 (332)
.....+++...||
T Consensus 316 ~~~~~~~~~~~~~ 328 (328)
T cd08226 316 EQTQGSILSLLPP 328 (328)
T ss_pred HhcccchhhcCCc
Confidence 8777767666654
No 249
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1.7e-41 Score=292.52 Aligned_cols=263 Identities=29% Similarity=0.445 Sum_probs=202.8
Q ss_pred hcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcC-C
Q 035861 11 FEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDD-H 89 (332)
Q Consensus 11 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-~ 89 (332)
++|+..+.||.|++|.||++.+..+++.+|+|.+....... . ...+.+|++.+++++||||+++++.+... .
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~-~------~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 73 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPD-L------QKQILRELEINKSCKSPYIVKYYGAFLDESS 73 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchH-H------HHHHHHHHHHHHhCCCCCeeeeeeEEEccCC
Confidence 47899999999999999999999899999999987543211 1 12467899999999999999999988543 3
Q ss_pred CeEEEEccccccc-HHHHH---HhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeeccccc
Q 035861 90 DSVYMVMEYMEHD-LKWLM---ESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSR 165 (332)
Q Consensus 90 ~~~~lv~e~~~~~-l~~~~---~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~ 165 (332)
...++||||++|+ +.+.+ ......+++..+..++.||+.||+|||+.|++|+||+|+||+++.++.++|+|||.+.
T Consensus 74 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~ 153 (287)
T cd06621 74 SSIGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLTRKGQVKLCDFGVSG 153 (287)
T ss_pred CeEEEEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecCCeEEEeeccccc
Confidence 5689999999874 43332 2234568999999999999999999999999999999999999999999999999987
Q ss_pred ccCCCCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCh-----HHHHHHHHHHcCCCCCC
Q 035861 166 QYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTE-----VDQIDKIFKTLGTPTET 240 (332)
Q Consensus 166 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~-----~~~~~~~~~~~~~~~~~ 240 (332)
...... .....++..|+|||.+.+ ..++.++|+||||+++|+|++|..||..... .+....+.... ...
T Consensus 154 ~~~~~~--~~~~~~~~~y~~pE~~~~-~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~---~~~ 227 (287)
T cd06621 154 ELVNSL--AGTFTGTSFYMAPERIQG-KPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMP---NPE 227 (287)
T ss_pred cccccc--cccccCCccccCHHHhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCC---chh
Confidence 543221 123456788999999876 6789999999999999999999999976522 11111111100 000
Q ss_pred cccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCC
Q 035861 241 IWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVP 313 (332)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~ 313 (332)
. ..........++.+.+||.+||+.+|++||++.|+++||||++.-
T Consensus 228 ~---------------------------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~~~~~~~~ 273 (287)
T cd06621 228 L---------------------------KDEPGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEHPWIKAQM 273 (287)
T ss_pred h---------------------------ccCCCCCCchHHHHHHHHHHHcCCCcccCCCHHHHHhCccccccc
Confidence 0 000000112467889999999999999999999999999996643
No 250
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.4e-42 Score=319.53 Aligned_cols=298 Identities=22% Similarity=0.309 Sum_probs=200.8
Q ss_pred cchhcccccccccccCcEEEEEEEECCCC-cEEEEEEeecccCCcc---------cccccCCCcchhHHHHHHhhCCCCC
Q 035861 8 RSVFEFEKLNKISEGTYGIVYRARDKKSG-EIVALKKVKMNVGRKE---------DCLEYGFPISSLREINILLSFDHPS 77 (332)
Q Consensus 8 ~~~~~y~~~~~lg~g~~g~v~~~~~~~~~-~~v~iK~~~~~~~~~~---------~~~~~~~~~~~~~e~~~l~~l~h~~ 77 (332)
....+|++++.||+|+||+||++..+... ...++|.+........ ..........+.+|+.++++++|+|
T Consensus 145 ~~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~Hpn 224 (501)
T PHA03210 145 EFLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHEN 224 (501)
T ss_pred hhhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCC
Confidence 34578999999999999999998765322 2222221111000000 0000001124568999999999999
Q ss_pred eeeeeeeEEcCCCeEEEEcccccccHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCC
Q 035861 78 IVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMK----QPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQ 153 (332)
Q Consensus 78 i~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~----~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~ 153 (332)
|+.+++++... ...|++++++.+++...+.... .......+..++.||+.||.|||++||+|+||||+|||++.+
T Consensus 225 Iv~l~~~~~~~-~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLKP~NILl~~~ 303 (501)
T PHA03210 225 ILKIEEILRSE-ANTYMITQKYDFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIFLNCD 303 (501)
T ss_pred cCcEeEEEEEC-CeeEEEEeccccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCC
Confidence 99999998444 7789999999988877665422 234567788899999999999999999999999999999999
Q ss_pred CcEEEeecccccccCCCCC-CCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCC-CC--ChHHHHHH
Q 035861 154 GVLKICDFGMSRQYGSPLK-PYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFS-GT--TEVDQIDK 229 (332)
Q Consensus 154 ~~~~l~df~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~-~~--~~~~~~~~ 229 (332)
+.+||+|||++........ ......|+..|+|||++.+ ..++.++||||||+++|+|++|..++. .. .......+
T Consensus 304 ~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~~~ 382 (501)
T PHA03210 304 GKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAG-DGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQLLK 382 (501)
T ss_pred CCEEEEeCCCceecCcccccccccccCCcCCCCchhhcC-CCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHHHH
Confidence 9999999999976643322 2234578999999999987 678999999999999999999876543 22 33344444
Q ss_pred HHHHcCCCCCCcccCCCCCccccccc-cCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCC
Q 035861 230 IFKTLGTPTETIWPGLSELPGAKANF-AKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYW 308 (332)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~ 308 (332)
++......... ++... ....+. ............+. +-....++..+.++|.+||+.||.+|||+.|+|+|||
T Consensus 383 ~~~~~~~~~~~-~p~~~---~~~~~~i~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~hp~ 456 (501)
T PHA03210 383 IIDSLSVCDEE-FPDPP---CKLFDYIDSAEIDHAGHSVPP--LIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLALPL 456 (501)
T ss_pred HHHhcccChhh-cCCcH---HHHHHHhhhhhcccCccchhh--HHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhChh
Confidence 44433322211 11100 000000 00000000000000 0011125677889999999999999999999999999
Q ss_pred CCCCC
Q 035861 309 FHEVP 313 (332)
Q Consensus 309 f~~~~ 313 (332)
|....
T Consensus 457 f~~~~ 461 (501)
T PHA03210 457 FSAEE 461 (501)
T ss_pred hhcCC
Confidence 98865
No 251
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-42 Score=316.24 Aligned_cols=256 Identities=25% Similarity=0.383 Sum_probs=206.0
Q ss_pred hcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhC-CCCCeeeeee-eEEcC
Q 035861 11 FEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSF-DHPSIVNVKE-VVMDD 88 (332)
Q Consensus 11 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~-~~~~~ 88 (332)
.+++|.+.|.+|||+.||+|.+...+..||+|++....... .+.+.+|+.+|++| .|+||+.+++ .....
T Consensus 37 ~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~--------L~~v~~EI~~MK~L~gh~nIV~yidss~~~~ 108 (738)
T KOG1989|consen 37 HRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEA--------LNAVKREIDIMKLLSGHKNIVSYIDSSAINR 108 (738)
T ss_pred EEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHH--------HHHHHHHHHHHHHhcCCCceeeEeccccccc
Confidence 47889999999999999999999888999999997652111 12467999999999 5999999999 33221
Q ss_pred -----CCeEEEEccccc-ccHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCC--cccccCCCCCEEEcCCCcEEEe
Q 035861 89 -----HDSVYMVMEYME-HDLKWLMESM-KQPFSTSEVKCLMLQLLEGVKYLHDNW--VLHRDLKTSNLLLNNQGVLKIC 159 (332)
Q Consensus 89 -----~~~~~lv~e~~~-~~l~~~~~~~-~~~l~~~~~~~i~~~l~~~L~~lh~~~--i~H~di~p~Nili~~~~~~~l~ 159 (332)
.-.++|.||||. |++.+.+..+ ...|++.++++|++|+|+|+++||... |+|||||-+||||+.+|..|||
T Consensus 109 ~~~~~~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~g~~KLC 188 (738)
T KOG1989|consen 109 SSNNGVWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSADGNYKLC 188 (738)
T ss_pred cCCCceeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCCCCEEeC
Confidence 235789999999 6898888754 345999999999999999999999998 9999999999999999999999
Q ss_pred ecccccccCCCCCC---------Cccccccccccchhhhc--CCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHH
Q 035861 160 DFGMSRQYGSPLKP---------YTSLVVTLWYRAPELLL--GAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQID 228 (332)
Q Consensus 160 df~~~~~~~~~~~~---------~~~~~~~~~y~aPE~~~--~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~ 228 (332)
|||++...-..... .-....|+.|+|||.+. .+...+.++|||+|||+||.|+....||........
T Consensus 189 DFGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~laI-- 266 (738)
T KOG1989|consen 189 DFGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKLAI-- 266 (738)
T ss_pred cccccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcceeE--
Confidence 99998754322211 11235689999999874 346789999999999999999999999987633221
Q ss_pred HHHHHcCCCCCCcccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcC--
Q 035861 229 KIFKTLGTPTETIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNH-- 306 (332)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h-- 306 (332)
.+ ..+.++..+.++..+++||+.||+.||++||++-+++.+
T Consensus 267 --ln-----------------------------------g~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~ 309 (738)
T KOG1989|consen 267 --LN-----------------------------------GNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIF 309 (738)
T ss_pred --Ee-----------------------------------ccccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHH
Confidence 11 223344445699999999999999999999999999876
Q ss_pred ------CCCCCCC
Q 035861 307 ------YWFHEVP 313 (332)
Q Consensus 307 ------p~f~~~~ 313 (332)
+++.++.
T Consensus 310 ~l~~~~~~~~~~~ 322 (738)
T KOG1989|consen 310 ELANKPCPIPDIY 322 (738)
T ss_pred HHhcCCCCccccc
Confidence 5555555
No 252
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=2.8e-41 Score=286.38 Aligned_cols=249 Identities=23% Similarity=0.386 Sum_probs=198.5
Q ss_pred hhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCC
Q 035861 10 VFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDH 89 (332)
Q Consensus 10 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 89 (332)
..+|++++.||+|++|+||.+.+.. +..+|+|.+....... ..+.+|+..+++++||||+++++++. ..
T Consensus 3 ~~~~~~~~~lg~G~~~~vy~~~~~~-~~~~aik~~~~~~~~~---------~~~~~e~~~l~~l~h~~i~~~~~~~~-~~ 71 (256)
T cd05113 3 PKDLTFLKELGTGQFGVVKYGKWRG-QYDVAIKMIKEGSMSE---------DEFIEEAKVMMKLSHEKLVQLYGVCT-KQ 71 (256)
T ss_pred hHHeEEeeEecCcccceEEEEEecC-CCcEEEEEcCCCcccH---------HHHHHHHHHHhcCCCCCeeeEEEEEc-cC
Confidence 4689999999999999999998764 4459999886433211 14678999999999999999999984 44
Q ss_pred CeEEEEccccccc-HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccC
Q 035861 90 DSVYMVMEYMEHD-LKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYG 168 (332)
Q Consensus 90 ~~~~lv~e~~~~~-l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~ 168 (332)
...+++|||+.++ +.+.+......+++..++.++.|++.||+|||+.|++|+||+|.||+++.++.++|+|||.+....
T Consensus 72 ~~~~lv~e~~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~ 151 (256)
T cd05113 72 RPIYIVTEYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVL 151 (256)
T ss_pred CCcEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCCEEECCCccceecC
Confidence 6789999999865 555555444578999999999999999999999999999999999999999999999999887543
Q ss_pred CCCC-CCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCCCCCCcccCCC
Q 035861 169 SPLK-PYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA-KKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLS 246 (332)
Q Consensus 169 ~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (332)
.+.. ......++..|+|||.+.+ ..++.++|+||||+++|+|++ |..||...+..+....+.......
T Consensus 152 ~~~~~~~~~~~~~~~y~~pe~~~~-~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~--------- 221 (256)
T cd05113 152 DDEYTSSVGSKFPVRWSPPEVLLY-SKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKVSQGLRLY--------- 221 (256)
T ss_pred CCceeecCCCccChhhCCHHHHhc-CcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHhcCCCCC---------
Confidence 2211 1112234567999999976 568899999999999999998 999998777665555543321111
Q ss_pred CCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcC
Q 035861 247 ELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNH 306 (332)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 306 (332)
.....+..+++++.+||+.+|.+||++.+|+++
T Consensus 222 ---------------------------~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~ 254 (256)
T cd05113 222 ---------------------------RPHLASEKVYAIMYSCWHEKAEERPTFQQLLSS 254 (256)
T ss_pred ---------------------------CCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHh
Confidence 011257889999999999999999999999864
No 253
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=3.1e-41 Score=291.11 Aligned_cols=261 Identities=26% Similarity=0.401 Sum_probs=200.7
Q ss_pred chhcccccccccccCcEEEEEEEECC-----CCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeee
Q 035861 9 SVFEFEKLNKISEGTYGIVYRARDKK-----SGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKE 83 (332)
Q Consensus 9 ~~~~y~~~~~lg~g~~g~v~~~~~~~-----~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~ 83 (332)
..++|++.+.||+|++|.||+|.... .+..||+|.+........ ...+.+|+..++.++|+||+++++
T Consensus 4 ~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~-------~~~~~~e~~~l~~l~~~~i~~~~~ 76 (288)
T cd05061 4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRE-------RIEFLNEASVMKGFTCHHVVRLLG 76 (288)
T ss_pred cHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHH-------HHHHHHHHHHHHhCCCCCeeeEEE
Confidence 35689999999999999999997642 345799998754321111 114568999999999999999999
Q ss_pred eEEcCCCeEEEEcccccc-cHHHHHHhcC---------CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCC
Q 035861 84 VVMDDHDSVYMVMEYMEH-DLKWLMESMK---------QPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQ 153 (332)
Q Consensus 84 ~~~~~~~~~~lv~e~~~~-~l~~~~~~~~---------~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~ 153 (332)
.+.+. ...++||||+++ ++.+.+.... ..++...+..++.|++.||.|||++|++|+||||+||+++.+
T Consensus 77 ~~~~~-~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili~~~ 155 (288)
T cd05061 77 VVSKG-QPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHD 155 (288)
T ss_pred EEcCC-CCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEEcCC
Confidence 88444 678999999985 5555554321 234667889999999999999999999999999999999999
Q ss_pred CcEEEeecccccccCCCCC--CCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHH
Q 035861 154 GVLKICDFGMSRQYGSPLK--PYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA-KKPLFSGTTEVDQIDKI 230 (332)
Q Consensus 154 ~~~~l~df~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~llt-g~~pf~~~~~~~~~~~~ 230 (332)
+.++|+|||.+........ ......++..|+|||.+.+ ..++.++|+||||+++|++++ |..||......+....+
T Consensus 156 ~~~~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~-~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~~~~~~ 234 (288)
T cd05061 156 FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKD-GVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFV 234 (288)
T ss_pred CcEEECcCCccccccccccccccCCCcccccccCHHHhcc-CCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Confidence 9999999999875432111 1122344667999999876 668999999999999999998 78888776655544433
Q ss_pred HHHcCCCCCCcccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhc-----
Q 035861 231 FKTLGTPTETIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALN----- 305 (332)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~----- 305 (332)
...... .....+++.+.+++.+||+.||++||++.++++
T Consensus 235 ~~~~~~------------------------------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~ 278 (288)
T cd05061 235 MDGGYL------------------------------------DQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDD 278 (288)
T ss_pred HcCCCC------------------------------------CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhh
Confidence 221100 011225788999999999999999999999988
Q ss_pred -CCCCCCCCC
Q 035861 306 -HYWFHEVPL 314 (332)
Q Consensus 306 -hp~f~~~~~ 314 (332)
||||..+.|
T Consensus 279 ~~~~~~~~~~ 288 (288)
T cd05061 279 LHPSFPEVSF 288 (288)
T ss_pred cCCCCCCCCC
Confidence 999998764
No 254
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=2.6e-41 Score=293.79 Aligned_cols=257 Identities=26% Similarity=0.374 Sum_probs=194.2
Q ss_pred hcccccccccccCcEEEEEEEECC----------------CCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCC
Q 035861 11 FEFEKLNKISEGTYGIVYRARDKK----------------SGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFD 74 (332)
Q Consensus 11 ~~y~~~~~lg~g~~g~v~~~~~~~----------------~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~ 74 (332)
++|.+.+.||+|+||.||++.+.. ++..||+|++........ ...+.+|+..+.+++
T Consensus 5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~-------~~~~~~E~~~l~~l~ 77 (304)
T cd05096 5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNA-------RNDFLKEVKILSRLK 77 (304)
T ss_pred hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHH-------HHHHHHHHHHHhhcC
Confidence 589999999999999999998642 344799998865322110 124678999999999
Q ss_pred CCCeeeeeeeEEcCCCeEEEEcccccc-cHHHHHHhcC------------------CCCCHHHHHHHHHHHHHHHHHHHH
Q 035861 75 HPSIVNVKEVVMDDHDSVYMVMEYMEH-DLKWLMESMK------------------QPFSTSEVKCLMLQLLEGVKYLHD 135 (332)
Q Consensus 75 h~~i~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~------------------~~l~~~~~~~i~~~l~~~L~~lh~ 135 (332)
||||+++++.+.+. ...++||||+++ ++.+.+.... ..+++..++.++.||+.||+|||+
T Consensus 78 h~niv~~~~~~~~~-~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~ 156 (304)
T cd05096 78 DPNIIRLLGVCVDE-DPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSS 156 (304)
T ss_pred CCCeeEEEEEEecC-CceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999555 678999999986 4444443211 246788899999999999999999
Q ss_pred CCcccccCCCCCEEEcCCCcEEEeecccccccCCCCC--CCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHh
Q 035861 136 NWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLK--PYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA 213 (332)
Q Consensus 136 ~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~llt 213 (332)
.|++|+||||+||+++.++.++|+|||.+........ ......++..|+|||.+.. ..++.++|+||||+++|+|++
T Consensus 157 ~~ivH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~ 235 (304)
T cd05096 157 LNFVHRDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILM-GKFTTASDVWAFGVTLWEILM 235 (304)
T ss_pred CCccccCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhc-CCCCchhhhHHHHHHHHHHHH
Confidence 9999999999999999999999999999876532211 1122344678999999876 668999999999999999986
Q ss_pred --CCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcC
Q 035861 214 --KKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLT 291 (332)
Q Consensus 214 --g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~ 291 (332)
+..||...+..+.............. ......++.++..+.+|+.+||+
T Consensus 236 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~-----------------------------~~~~~~~~~~~~~~~~li~~cl~ 286 (304)
T cd05096 236 LCKEQPYGELTDEQVIENAGEFFRDQGR-----------------------------QVYLFRPPPCPQGLYELMLQCWS 286 (304)
T ss_pred ccCCCCCCcCCHHHHHHHHHHHhhhccc-----------------------------cccccCCCCCCHHHHHHHHHHcc
Confidence 56788776655544443321110000 00011123478899999999999
Q ss_pred CCCCCCCCHHHHhc
Q 035861 292 YDPEKRITVDDALN 305 (332)
Q Consensus 292 ~dp~~Rps~~ell~ 305 (332)
.||++|||+++|.+
T Consensus 287 ~~p~~RPs~~~i~~ 300 (304)
T cd05096 287 RDCRERPSFSDIHA 300 (304)
T ss_pred CCchhCcCHHHHHH
Confidence 99999999999953
No 255
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.4e-42 Score=305.04 Aligned_cols=265 Identities=26% Similarity=0.389 Sum_probs=228.8
Q ss_pred cccchhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeE
Q 035861 6 GCRSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVV 85 (332)
Q Consensus 6 ~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~ 85 (332)
..+.+..|.++..||+|.|++|.++++..++..||||.+.+........ ..+.+|+++++.++||||++++.+.
T Consensus 51 ~~~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~------~k~~rev~imk~l~HPnIvkl~~v~ 124 (596)
T KOG0586|consen 51 DSNSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKR------QKLGREVDIMKSLNHPNIVKLFSVI 124 (596)
T ss_pred ccccccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHH------HHHHHHHHHHHhcCCcceeeeeeee
Confidence 4456778999999999999999999999999999999998776544321 1357999999999999999999999
Q ss_pred EcCCCeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeeccccc
Q 035861 86 MDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSR 165 (332)
Q Consensus 86 ~~~~~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~ 165 (332)
.....+|+||||+.|+-+......++.+.+..+..++.|+..|++|||+++|+|+|||++||+++.+.++||+|||++.
T Consensus 125 -~t~~~lylV~eya~~ge~~~yl~~~gr~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL~~~mnikIaDfgfS~ 203 (596)
T KOG0586|consen 125 -ETEATLYLVMEYASGGELFDYLVKHGRMKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILLDENMNIKIADFGFST 203 (596)
T ss_pred -eecceeEEEEEeccCchhHHHHHhcccchhhhhhhhhHHHHHHHHHHhhcceeccccchhhcccccccceeeeccccce
Confidence 4448899999999876555555558888889999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCC
Q 035861 166 QYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGL 245 (332)
Q Consensus 166 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (332)
.++. .....+.+|++.|.|||++.+..+..++.|+||||+++|-++.|..||.+.+-.....+.....-..+.
T Consensus 204 ~~~~-~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rvl~gk~rIp~------ 276 (596)
T KOG0586|consen 204 FFDY-GLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRVLRGKYRIPF------ 276 (596)
T ss_pred eecc-cccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccccccchheeeeecccc------
Confidence 8864 345567899999999999999888899999999999999999999999988766555554443222222
Q ss_pred CCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCCCC
Q 035861 246 SELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVPLP 315 (332)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~ 315 (332)
.++.+..+||+++|-.+|.+|++.+++.+|.|.......
T Consensus 277 -------------------------------~ms~dce~lLrk~lvl~Pskr~~~dqim~~~W~n~~~~~ 315 (596)
T KOG0586|consen 277 -------------------------------YMSCDCEDLLRKFLVLNPSKRGPCDQIMKDRWRNDLLEA 315 (596)
T ss_pred -------------------------------eeechhHHHHHHhhccCccccCCHHHhhhhcccchhhhh
Confidence 278888999999999999999999999999999998876
No 256
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=4.3e-41 Score=285.33 Aligned_cols=257 Identities=31% Similarity=0.517 Sum_probs=206.3
Q ss_pred cccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCC-C
Q 035861 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDH-D 90 (332)
Q Consensus 12 ~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~ 90 (332)
+|++.+.||+|++|.||+|.+..++..+++|++......... ...+.+|+..+++++|+||+++++.+.... .
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~------~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 74 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEE------LEALEREIRILSSLQHPNIVRYYGSERDEEKN 74 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHH------HHHHHHHHHHHHHcCCCCEeeEEEEEecCCCC
Confidence 588899999999999999999989999999998765432111 124678999999999999999999985442 6
Q ss_pred eEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCCC
Q 035861 91 SVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSP 170 (332)
Q Consensus 91 ~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~~ 170 (332)
..++++|+++++.+.........+++..++.++.|++.||++||+.|++|+||+|+||+++.++.++|+|||.+......
T Consensus 75 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~ 154 (260)
T cd06606 75 TLNIFLEYVSGGSLSSLLKKFGKLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDI 154 (260)
T ss_pred eEEEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEcccccEEecccc
Confidence 78999999976555555444568999999999999999999999999999999999999999999999999998876543
Q ss_pred CC--CCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCC
Q 035861 171 LK--PYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSEL 248 (332)
Q Consensus 171 ~~--~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (332)
.. ......++..|.|||.+.. ...+.++|+||||+++|++++|..||........ .......
T Consensus 155 ~~~~~~~~~~~~~~y~~pE~~~~-~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~--~~~~~~~------------- 218 (260)
T cd06606 155 ETGEGTGSVRGTPYWMAPEVIRG-EEYGRAADIWSLGCTVIEMATGKPPWSELGNPMA--ALYKIGS------------- 218 (260)
T ss_pred cccccccCCCCCccccCHhhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHH--HHHhccc-------------
Confidence 32 1345578889999999877 5589999999999999999999999987652211 1111100
Q ss_pred ccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCC
Q 035861 249 PGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWF 309 (332)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f 309 (332)
.......+..++..+.+||.+|++.+|++||++.+++.||||
T Consensus 219 -------------------~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 260 (260)
T cd06606 219 -------------------SGEPPEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQHPFL 260 (260)
T ss_pred -------------------cCCCcCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhhCCCC
Confidence 000011122358899999999999999999999999999997
No 257
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4.7e-42 Score=297.48 Aligned_cols=263 Identities=29% Similarity=0.430 Sum_probs=204.1
Q ss_pred hcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhC-CCCCeeeeeeeEEcCC
Q 035861 11 FEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSF-DHPSIVNVKEVVMDDH 89 (332)
Q Consensus 11 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~ 89 (332)
..|++++.||.||.+.||++..... ..||+|.+......... ...+.+|+.+|.+| .|.+|+.++++-+.+
T Consensus 361 ~~Yeilk~iG~GGSSkV~kV~~s~~-~iyalkkv~~~~~D~qt------l~gy~nEI~lL~KLkg~~~IIqL~DYEv~d- 432 (677)
T KOG0596|consen 361 REYEILKQIGSGGSSKVFKVLNSDK-QIYALKKVVLLEADNQT------LDGYRNEIALLNKLKGHDKIIQLYDYEVTD- 432 (677)
T ss_pred chhhHHHhhcCCCcceeeeeecCCC-cchhhhHHHHhhcCHHH------HHHHHHHHHHHHHhcCCceEEEEeeeeccC-
Confidence 4899999999999999999998654 44666666544333322 22567999999999 699999999998665
Q ss_pred CeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCC
Q 035861 90 DSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGS 169 (332)
Q Consensus 90 ~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~ 169 (332)
+++|+|||+=+.+|...+......++.-.++.+..|++.|+.++|++||||.||||.|+|+-. |.+||+|||.|.....
T Consensus 433 ~~lYmvmE~Gd~DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLlVk-G~LKLIDFGIA~aI~~ 511 (677)
T KOG0596|consen 433 GYLYMVMECGDIDLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLLVK-GRLKLIDFGIANAIQP 511 (677)
T ss_pred ceEEEEeecccccHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEEEe-eeEEeeeechhcccCc
Confidence 999999999999998888886666666799999999999999999999999999999999876 8999999999987644
Q ss_pred CCC--CCccccccccccchhhhcCC----------CCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCC
Q 035861 170 PLK--PYTSLVVTLWYRAPELLLGA----------KKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTP 237 (332)
Q Consensus 170 ~~~--~~~~~~~~~~y~aPE~~~~~----------~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~ 237 (332)
... .....+||+-||+||++... ...+.+||||||||+||+|+.|+.||..-... +.++.....+.
T Consensus 512 DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n~--~aKl~aI~~P~ 589 (677)
T KOG0596|consen 512 DTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIINQ--IAKLHAITDPN 589 (677)
T ss_pred cccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHHH--HHHHHhhcCCC
Confidence 333 34567899999999998531 12577999999999999999999999764321 12221111110
Q ss_pred CCCcccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCCCC
Q 035861 238 TETIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVPLP 315 (332)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~ 315 (332)
.+--++.++ -..++.++++.||+.||.+||++.|+|+|||++-++.+
T Consensus 590 ~~Iefp~~~-------------------------------~~~~li~~mK~CL~rdPkkR~si~eLLqhpFl~~~~i~ 636 (677)
T KOG0596|consen 590 HEIEFPDIP-------------------------------ENDELIDVMKCCLARDPKKRWSIPELLQHPFLQIQPIP 636 (677)
T ss_pred ccccccCCC-------------------------------CchHHHHHHHHHHhcCcccCCCcHHHhcCccccccccc
Confidence 000111110 01237899999999999999999999999999986654
No 258
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=1.9e-41 Score=288.23 Aligned_cols=250 Identities=23% Similarity=0.337 Sum_probs=202.7
Q ss_pred chhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcC
Q 035861 9 SVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDD 88 (332)
Q Consensus 9 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 88 (332)
.-.+|++++.||.|++|.||+|.+.. +..+++|++........ ..+..|+..++.++|+|++++++.+. +
T Consensus 4 ~~~~y~~~~~ig~g~~~~vy~~~~~~-~~~~~~k~~~~~~~~~~--------~~~~~e~~~l~~l~~~~i~~~~~~~~-~ 73 (261)
T cd05148 4 PREEFTLERKLGSGYFGEVWEGLWKN-RVRVAIKILKSDDLLKQ--------QDFQKEVQALKRLRHKHLISLFAVCS-V 73 (261)
T ss_pred cHHHHHHhhhhccCCCccEEEeEecC-CCcEEEEeccccchhhH--------HHHHHHHHHHhcCCCcchhheeeeEe-c
Confidence 44689999999999999999999987 88899999875432111 14568999999999999999999884 4
Q ss_pred CCeEEEEcccccc-cHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccc
Q 035861 89 HDSVYMVMEYMEH-DLKWLMESM-KQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQ 166 (332)
Q Consensus 89 ~~~~~lv~e~~~~-~l~~~~~~~-~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~ 166 (332)
....++||||+++ ++.+.+... ...+++..+..++.||+.||+|||++|++|+||+|+||+++.++.++|+|||.+..
T Consensus 74 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~ 153 (261)
T cd05148 74 GEPVYIITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVGEDLVCKVADFGLARL 153 (261)
T ss_pred CCCeEEEEeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEEcCCceEEEccccchhh
Confidence 4778999999987 555555442 34689999999999999999999999999999999999999999999999999876
Q ss_pred cCCCCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCCCCCCcccCC
Q 035861 167 YGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA-KKPLFSGTTEVDQIDKIFKTLGTPTETIWPGL 245 (332)
Q Consensus 167 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (332)
............++..|+|||.+.. ..++.++|+||||+++|++++ |..||...+..+....+......
T Consensus 154 ~~~~~~~~~~~~~~~~~~~PE~~~~-~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~--------- 223 (261)
T cd05148 154 IKEDVYLSSDKKIPYKWTAPEAASH-GTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQITAGYRM--------- 223 (261)
T ss_pred cCCccccccCCCCceEecCHHHHcc-CCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHhCCcC---------
Confidence 5433222333445678999999876 678999999999999999998 89999877766555555432111
Q ss_pred CCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhc
Q 035861 246 SELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALN 305 (332)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 305 (332)
..+..++..+.+++.+||+.||++||++.++++
T Consensus 224 ---------------------------~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~ 256 (261)
T cd05148 224 ---------------------------PCPAKCPQEIYKIMLECWAAEPEDRPSFKALRE 256 (261)
T ss_pred ---------------------------CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 112237889999999999999999999999875
No 259
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=3e-41 Score=287.40 Aligned_cols=250 Identities=21% Similarity=0.347 Sum_probs=199.4
Q ss_pred hhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCC
Q 035861 10 VFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDH 89 (332)
Q Consensus 10 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 89 (332)
..+|.+.+.||.|++|.||+|.+..+++.+++|++....... ..+.+|+..+++++|+||+++++.+.. +
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~---------~~~~~e~~~l~~l~h~~i~~~~~~~~~-~ 74 (263)
T cd05052 5 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV---------EEFLKEAAVMKEIKHPNLVQLLGVCTR-E 74 (263)
T ss_pred hHHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCchHH---------HHHHHHHHHHHhCCCCChhheEEEEcC-C
Confidence 357999999999999999999999899999999886432111 145689999999999999999999844 4
Q ss_pred CeEEEEcccccc-cHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeeccccccc
Q 035861 90 DSVYMVMEYMEH-DLKWLMESM-KQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQY 167 (332)
Q Consensus 90 ~~~~lv~e~~~~-~l~~~~~~~-~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~ 167 (332)
...+++|||+++ ++.+.+... ...+++..++.++.|++.||++||++|++|+||+|+||+++.++.++|+|||.+...
T Consensus 75 ~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~ 154 (263)
T cd05052 75 PPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM 154 (263)
T ss_pred CCcEEEEEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCcEEeCCCcccccc
Confidence 778999999986 455555443 345899999999999999999999999999999999999999999999999998765
Q ss_pred CCCCCCC-ccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCCCCCCcccCC
Q 035861 168 GSPLKPY-TSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA-KKPLFSGTTEVDQIDKIFKTLGTPTETIWPGL 245 (332)
Q Consensus 168 ~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (332)
....... ....++..|+|||.+.+ ..++.++|+||||+++|+|++ |..||......+....+.....
T Consensus 155 ~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~---------- 223 (263)
T cd05052 155 TGDTYTAHAGAKFPIKWTAPESLAY-NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKGYR---------- 223 (263)
T ss_pred ccceeeccCCCCCccccCCHHHhcc-CCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCC----------
Confidence 4322111 12233567999998876 678899999999999999998 9999987665554444322110
Q ss_pred CCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcC
Q 035861 246 SELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNH 306 (332)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 306 (332)
...+..++.++.++|.+||+.+|++||++.++++.
T Consensus 224 --------------------------~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~ 258 (263)
T cd05052 224 --------------------------MERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQA 258 (263)
T ss_pred --------------------------CCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHH
Confidence 01122378899999999999999999999999763
No 260
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=4.4e-41 Score=285.26 Aligned_cols=249 Identities=20% Similarity=0.351 Sum_probs=198.3
Q ss_pred hhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCC
Q 035861 10 VFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDH 89 (332)
Q Consensus 10 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 89 (332)
..+|++.+.||+|++|.||++.+. ++..+++|++....... ..+.+|+..++.++|+||+++++.+ ...
T Consensus 3 ~~~~~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~~~~---------~~~~~e~~~l~~l~~~~i~~~~~~~-~~~ 71 (256)
T cd05059 3 PSELTFLKELGSGQFGVVHLGKWR-GKIDVAIKMIREGAMSE---------DDFIEEAKVMMKLSHPNLVQLYGVC-TKQ 71 (256)
T ss_pred hHHcchhhhhccCCCceEEEeEec-CCccEEEEEeccCCCCH---------HHHHHHHHHHHhCCCCCEEEEEEEE-cCC
Confidence 457999999999999999999886 46679999886433211 1456899999999999999999988 444
Q ss_pred CeEEEEcccccc-cHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccC
Q 035861 90 DSVYMVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYG 168 (332)
Q Consensus 90 ~~~~lv~e~~~~-~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~ 168 (332)
...++|+|+++| ++.+.+......+++..+..++.|++.||++||+.|++|+||+|+||+++.++.++|+|||.+....
T Consensus 72 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~ 151 (256)
T cd05059 72 RPIFIVTEYMANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVGEDNVVKVSDFGLARYVL 151 (256)
T ss_pred CceEEEEecCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEECCCCcEEECCcccceecc
Confidence 788999999986 4555555545678999999999999999999999999999999999999999999999999887653
Q ss_pred CCCCC-CccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCCCCCCcccCCC
Q 035861 169 SPLKP-YTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA-KKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLS 246 (332)
Q Consensus 169 ~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (332)
..... .....++..|+|||.+.+ ..++.++|+||||+++|++++ |..||......+....+.....
T Consensus 152 ~~~~~~~~~~~~~~~y~~Pe~~~~-~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~----------- 219 (256)
T cd05059 152 DDQYTSSQGTKFPVKWAPPEVFDY-SRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVSAGYR----------- 219 (256)
T ss_pred cccccccCCCCCCccccCHHHhcc-CCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHcCCc-----------
Confidence 22111 111223457999999876 678899999999999999999 8999987666555444332111
Q ss_pred CCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcC
Q 035861 247 ELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNH 306 (332)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 306 (332)
...+..++.++.+++.+||+.+|++||++.++++.
T Consensus 220 -------------------------~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~ 254 (256)
T cd05059 220 -------------------------LYRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQ 254 (256)
T ss_pred -------------------------CCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence 01112378899999999999999999999999864
No 261
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=5.7e-41 Score=283.44 Aligned_cols=252 Identities=34% Similarity=0.552 Sum_probs=204.7
Q ss_pred cccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCCe
Q 035861 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHDS 91 (332)
Q Consensus 12 ~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 91 (332)
+|.+.+.||+|++|.||++.+..++..+++|++....... ...+.+|+..++.+.|++++.+.+.+..+ ..
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~--------~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-~~ 71 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEK--------KEKIINEIQILKKCKHPNIVKYYGSYLKK-DE 71 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhH--------HHHHHHHHHHHHhCCCCCEeEEEEEEecC-Ce
Confidence 5889999999999999999999889999999997654311 12467899999999999999999988555 78
Q ss_pred EEEEcccccccHHHH-HHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCCC
Q 035861 92 VYMVMEYMEHDLKWL-MESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSP 170 (332)
Q Consensus 92 ~~lv~e~~~~~l~~~-~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~~ 170 (332)
.++++||++|..+.. +......+++..+..++.|++.||++||+.|++|+||+|+||+++.++.++|+|||.+......
T Consensus 72 ~~l~~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~ 151 (253)
T cd05122 72 LWIVMEFCSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDT 151 (253)
T ss_pred EEEEEecCCCCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEEccCCeEEEeecccccccccc
Confidence 899999999654444 4443368999999999999999999999999999999999999999999999999998776433
Q ss_pred CCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCCcc
Q 035861 171 LKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPG 250 (332)
Q Consensus 171 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (332)
.. .....++..|+|||.+.. ...+.++|+||||+++|++++|..||...+............ .+.
T Consensus 152 ~~-~~~~~~~~~~~~PE~~~~-~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~--~~~----------- 216 (253)
T cd05122 152 KA-RNTMVGTPYWMAPEVING-KPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIATNG--PPG----------- 216 (253)
T ss_pred cc-ccceecCCcccCHHHHcC-CCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcC--CCC-----------
Confidence 21 345567888999999876 558899999999999999999999998765444333322210 000
Q ss_pred ccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCC
Q 035861 251 AKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYW 308 (332)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~ 308 (332)
......++..+.++|.+||+.||++||++.++++|||
T Consensus 217 ---------------------~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~~~~ 253 (253)
T cd05122 217 ---------------------LRNPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLKHPF 253 (253)
T ss_pred ---------------------cCcccccCHHHHHHHHHHccCChhhCCCHHHHhcCCC
Confidence 0001114788999999999999999999999999998
No 262
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00 E-value=2.1e-41 Score=293.22 Aligned_cols=265 Identities=26% Similarity=0.442 Sum_probs=208.1
Q ss_pred chhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhC-CCCCeeeeeeeEEc
Q 035861 9 SVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSF-DHPSIVNVKEVVMD 87 (332)
Q Consensus 9 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~ 87 (332)
..++|++.+.||+|++|.||+|.+..++..||||.+........ ...+..|+..+... .|+||+++++.+.+
T Consensus 13 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~-------~~~~~~e~~~~~~~~~~~~i~~~~~~~~~ 85 (296)
T cd06618 13 DLNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEE-------NKRILMDLDVVLKSHDCPYIVKCYGYFIT 85 (296)
T ss_pred CcchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHH-------HHHHHHHHHHHHhccCCCchHhhheeeec
Confidence 56799999999999999999999998899999999975432111 11345666666555 59999999999855
Q ss_pred CCCeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH-CCcccccCCCCCEEEcCCCcEEEeecccccc
Q 035861 88 DHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHD-NWVLHRDLKTSNLLLNNQGVLKICDFGMSRQ 166 (332)
Q Consensus 88 ~~~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~-~~i~H~di~p~Nili~~~~~~~l~df~~~~~ 166 (332)
+ ...+++||++++.+...+......+++..+..++.|++.||+|||+ .|++|+||+|+||+++.++.++|+|||.+..
T Consensus 86 ~-~~~~~v~e~~~~~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~~~~~kL~dfg~~~~ 164 (296)
T cd06618 86 D-SDVFICMELMSTCLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDASGNVKLCDFGISGR 164 (296)
T ss_pred C-CeEEEEeeccCcCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcCCCCEEECccccchh
Confidence 4 7899999999988777776666789999999999999999999997 6999999999999999999999999999876
Q ss_pred cCCCCCCCccccccccccchhhhcCC---CCCCchhHHHHHHHHHHHHHhCCCCCCCCCh-HHHHHHHHHHcCCCCCCcc
Q 035861 167 YGSPLKPYTSLVVTLWYRAPELLLGA---KKYSTAVDMWSVGCIMAELLAKKPLFSGTTE-VDQIDKIFKTLGTPTETIW 242 (332)
Q Consensus 167 ~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~sDi~slG~~l~~lltg~~pf~~~~~-~~~~~~~~~~~~~~~~~~~ 242 (332)
..... ......++..|+|||.+.+. ..++.++|+||||+++|+|++|+.||..... .+....+.......
T Consensus 165 ~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~----- 238 (296)
T cd06618 165 LVDSK-AKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTKILQEEPPS----- 238 (296)
T ss_pred ccCCC-cccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHHHHHHhcCCCCC-----
Confidence 53321 12233567789999998653 2478899999999999999999999976432 22333222211000
Q ss_pred cCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCCCCC
Q 035861 243 PGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVPLPK 316 (332)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~~ 316 (332)
......++.++.+|+.+||+.||.+||+++++++||||..+...+
T Consensus 239 -----------------------------~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~~~ 283 (296)
T cd06618 239 -----------------------------LPPNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQHPFIRRYETAE 283 (296)
T ss_pred -----------------------------CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcChhhhccchhH
Confidence 000112678899999999999999999999999999999866543
No 263
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=100.00 E-value=3.1e-41 Score=285.06 Aligned_cols=247 Identities=32% Similarity=0.510 Sum_probs=201.1
Q ss_pred ccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCCeEEEEccc
Q 035861 19 ISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHDSVYMVMEY 98 (332)
Q Consensus 19 lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~lv~e~ 98 (332)
||.|++|.||++.+..+++.+++|++.......... ...+..|+..+++++|+|++++++.+ +++...++|||+
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~-----~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~~~v~e~ 74 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKE-----VEHTLTERNILSRINHPFIVKLHYAF-QTEEKLYLVLEY 74 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHH-----HHHHHHHHHHHHHcCCCcHHHHHHHe-ecCCeeEEEEec
Confidence 699999999999999889999999987654322211 11456899999999999999999988 455889999999
Q ss_pred ccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCCCCCCCcccc
Q 035861 99 MEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLV 178 (332)
Q Consensus 99 ~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~~~~~~~~~~ 178 (332)
++++.+.........+++..+..++.|++.||.+||+.|++|+||+|+||+++.++.++|+|||.+..............
T Consensus 75 ~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~ 154 (250)
T cd05123 75 APGGELFSHLSKEGRFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSRTNTFC 154 (250)
T ss_pred CCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEcCCCcEEEeecCcceecccCCCcccCCc
Confidence 96544444444456799999999999999999999999999999999999999999999999999877644323344556
Q ss_pred ccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCCccccccccCC
Q 035861 179 VTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGAKANFAKQ 258 (332)
Q Consensus 179 ~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (332)
++..|+|||.+.+ ...+.++|+||||+++|++++|..||...........+...
T Consensus 155 ~~~~~~~Pe~~~~-~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~------------------------- 208 (250)
T cd05123 155 GTPEYLAPEVLLG-KGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILKD------------------------- 208 (250)
T ss_pred CCccccChHHhCC-CCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcC-------------------------
Confidence 7888999999876 56889999999999999999999999877654444433321
Q ss_pred chhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCH---HHHhcCCCC
Q 035861 259 PYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITV---DDALNHYWF 309 (332)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~---~ell~hp~f 309 (332)
....+..++..+.++|.+||..||++||++ +++++||||
T Consensus 209 ------------~~~~~~~~~~~l~~~i~~~l~~~p~~R~~~~~~~~l~~~~~f 250 (250)
T cd05123 209 ------------PLRFPEFLSPEARDLISGLLQKDPTKRLGSGGAEEIKAHPFF 250 (250)
T ss_pred ------------CCCCCCCCCHHHHHHHHHHhcCCHhhCCCcccHHHHHhCCCC
Confidence 011122257889999999999999999999 999999998
No 264
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-42 Score=282.50 Aligned_cols=263 Identities=23% Similarity=0.384 Sum_probs=210.6
Q ss_pred hhcccc-cccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhC-CCCCeeeeeeeEEc
Q 035861 10 VFEFEK-LNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSF-DHPSIVNVKEVVMD 87 (332)
Q Consensus 10 ~~~y~~-~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~ 87 (332)
.+-|++ .+.||+|+++.|-.+....++..||||++.+....... ++.+|++.+.++ .|+||+.++++| +
T Consensus 76 ~d~YkLt~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~--------RvfREVe~f~~Cqgh~nilqLiefF-E 146 (463)
T KOG0607|consen 76 EDMYKLTSELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRS--------RVFREVETFYQCQGHKNILQLIEFF-E 146 (463)
T ss_pred HHHHHhHHHHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHH--------HHHHHHHHHHHhcCCccHHHHHHHh-c
Confidence 334444 35699999999999999999999999999877543322 567999999999 799999999999 6
Q ss_pred CCCeEEEEcccccccH-HHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCC---cEEEeeccc
Q 035861 88 DHDSVYMVMEYMEHDL-KWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQG---VLKICDFGM 163 (332)
Q Consensus 88 ~~~~~~lv~e~~~~~l-~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~---~~~l~df~~ 163 (332)
++...|+|||.+.|+. +..+.. ...+++.++.++..+|+.||.|||.+||+|+|+||+|||-.... -|||+||.+
T Consensus 147 dd~~FYLVfEKm~GGplLshI~~-~~~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDL 225 (463)
T KOG0607|consen 147 DDTRFYLVFEKMRGGPLLSHIQK-RKHFNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPNKVSPVKICDFDL 225 (463)
T ss_pred ccceEEEEEecccCchHHHHHHH-hhhccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCCCcCceeeecccc
Confidence 6688999999999764 555444 78899999999999999999999999999999999999987654 599999987
Q ss_pred ccccCCC-------CCCCccccccccccchhhhc----CCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC----------
Q 035861 164 SRQYGSP-------LKPYTSLVVTLWYRAPELLL----GAKKYSTAVDMWSVGCIMAELLAKKPLFSGTT---------- 222 (332)
Q Consensus 164 ~~~~~~~-------~~~~~~~~~~~~y~aPE~~~----~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~---------- 222 (332)
..-...+ .....+.+|+..|||||+.. ....|+.+.|.||||+++|-|++|.+||.+..
T Consensus 226 gSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe 305 (463)
T KOG0607|consen 226 GSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGE 305 (463)
T ss_pred ccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCC
Confidence 6543211 11234567888899999863 33568899999999999999999999997532
Q ss_pred -----hHHHHHHHHHHcCCCCCCcccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCC
Q 035861 223 -----EVDQIDKIFKTLGTPTETIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKR 297 (332)
Q Consensus 223 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R 297 (332)
....+..|..+....|+.. |..+|.+.++||+.+|..|+.+|
T Consensus 306 ~Cr~CQ~~LFesIQEGkYeFPdkd---------------------------------WahIS~eakdlisnLlvrda~~r 352 (463)
T KOG0607|consen 306 VCRVCQNKLFESIQEGKYEFPDKD---------------------------------WAHISSEAKDLISNLLVRDAKQR 352 (463)
T ss_pred ccHHHHHHHHHHHhccCCcCChhh---------------------------------hHHhhHHHHHHHHHHHhccHHhh
Confidence 2233444444433333332 34489999999999999999999
Q ss_pred CCHHHHhcCCCCCCCCCC
Q 035861 298 ITVDDALNHYWFHEVPLP 315 (332)
Q Consensus 298 ps~~ell~hp~f~~~~~~ 315 (332)
.++.++++|||++.....
T Consensus 353 lsa~~vlnhPw~~~~~~e 370 (463)
T KOG0607|consen 353 LSAAQVLNHPWVQRCAPE 370 (463)
T ss_pred hhhhhccCCccccccchh
Confidence 999999999999987644
No 265
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.8e-43 Score=292.68 Aligned_cols=275 Identities=27% Similarity=0.427 Sum_probs=235.9
Q ss_pred hhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCC-CCCeeeeeeeEEcC
Q 035861 10 VFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFD-HPSIVNVKEVVMDD 88 (332)
Q Consensus 10 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~ 88 (332)
..+|.++..||.|+||.|.++..+.+.+.||||++++.........+ --+.|-++|.... -|.++.++..+ +.
T Consensus 348 ~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDve-----ctm~EKrvLAL~~kppFL~qlHScF-QT 421 (683)
T KOG0696|consen 348 ATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVE-----CTMVEKRVLALPGKPPFLVQLHSCF-QT 421 (683)
T ss_pred ecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCccc-----ceehhhhheecCCCCchHHHHHHHh-hh
Confidence 45899999999999999999999999999999999987765554444 2357888887774 55666666666 55
Q ss_pred CCeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccC
Q 035861 89 HDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYG 168 (332)
Q Consensus 89 ~~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~ 168 (332)
-+.+|+||||+.|+-+-..+..-+.+.++.+..++..|+-||-+||++||+++|||.+||+++.+|++||.|||.+...-
T Consensus 422 mDRLyFVMEyvnGGDLMyhiQQ~GkFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni 501 (683)
T KOG0696|consen 422 MDRLYFVMEYVNGGDLMYHIQQVGKFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENI 501 (683)
T ss_pred hhheeeEEEEecCchhhhHHHHhcccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEeccCCceEeeecccccccc
Confidence 57899999999986555555557889999999999999999999999999999999999999999999999999998765
Q ss_pred CCCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCC
Q 035861 169 SPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSEL 248 (332)
Q Consensus 169 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (332)
.....-.+.+||+.|+|||.+.- .+|+.+.|.||+|++||||+.|..||.+.+..+....|....-..+..
T Consensus 502 ~~~~TTkTFCGTPdYiAPEIi~Y-qPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI~ehnvsyPKs-------- 572 (683)
T KOG0696|consen 502 FDGVTTKTFCGTPDYIAPEIIAY-QPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAIMEHNVSYPKS-------- 572 (683)
T ss_pred cCCcceeeecCCCcccccceEEe-cccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHccCcCccc--------
Confidence 55555678899999999999887 789999999999999999999999999999999988887754333322
Q ss_pred ccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCC-----HHHHhcCCCCCCCCCCCC--CCCC
Q 035861 249 PGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRIT-----VDDALNHYWFHEVPLPKS--KDFM 321 (332)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps-----~~ell~hp~f~~~~~~~~--~~~~ 321 (332)
+|.++.++....|.+.|.+|.. -.+|-+||||..+.|... ++..
T Consensus 573 -----------------------------lSkEAv~ickg~ltK~P~kRLGcg~~ge~di~~H~FFR~iDWek~E~~eiq 623 (683)
T KOG0696|consen 573 -----------------------------LSKEAVAICKGLLTKHPGKRLGCGPEGERDIREHPFFRRIDWEKLERREIQ 623 (683)
T ss_pred -----------------------------ccHHHHHHHHHHhhcCCccccCCCCccccchhhCcchhhccHHHHhhccCC
Confidence 7999999999999999999984 468999999999999988 5589
Q ss_pred CCCCCcc
Q 035861 322 PTFPPQH 328 (332)
Q Consensus 322 ~~~~~~~ 328 (332)
|+|+|+.
T Consensus 624 PPfkPk~ 630 (683)
T KOG0696|consen 624 PPFKPKI 630 (683)
T ss_pred CCCCCcc
Confidence 9999987
No 266
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=4e-41 Score=285.35 Aligned_cols=252 Identities=29% Similarity=0.508 Sum_probs=205.5
Q ss_pred cccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCCe
Q 035861 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHDS 91 (332)
Q Consensus 12 ~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 91 (332)
+|++.+.||.|++|.||++++..+++.+++|.+......... ...+.+|+..++.++|+||+++.+.+..+ ..
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~------~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-~~ 73 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKE------REDAVNEIRILASVNHPNIISYKEAFLDG-NK 73 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHH------HHHHHHHHHHHHhCCCCCchhhhhhhccC-CE
Confidence 588999999999999999999999999999998764432211 12456899999999999999999998555 88
Q ss_pred EEEEccccccc-HHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeeccccccc
Q 035861 92 VYMVMEYMEHD-LKWLMES---MKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQY 167 (332)
Q Consensus 92 ~~lv~e~~~~~-l~~~~~~---~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~ 167 (332)
.++|+|++++. +...+.. ....+++..++.++.|++.||++||+.|++|+||+|+||+++.++.++|+|||.+...
T Consensus 74 ~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~ 153 (256)
T cd08530 74 LCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLVANDLVKIGDLGISKVL 153 (256)
T ss_pred EEEEehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEecCCcEEEeeccchhhh
Confidence 99999999875 4443333 1356899999999999999999999999999999999999999999999999998776
Q ss_pred CCCCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCC
Q 035861 168 GSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSE 247 (332)
Q Consensus 168 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (332)
... ......++..|+|||.+.+ ..++.++|+||||+++|++++|..||...+.......+......
T Consensus 154 ~~~--~~~~~~~~~~~~~Pe~~~~-~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~----------- 219 (256)
T cd08530 154 KKN--MAKTQIGTPHYMAPEVWKG-RPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKVQRGKYP----------- 219 (256)
T ss_pred ccC--CcccccCCccccCHHHHCC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCC-----------
Confidence 443 2334567889999999876 67888999999999999999999999877655443333221100
Q ss_pred CccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCC
Q 035861 248 LPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWF 309 (332)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f 309 (332)
.....++.++++++.+||+.+|++||++.++++||++
T Consensus 220 -------------------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~p~~ 256 (256)
T cd08530 220 -------------------------PIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILASPAV 256 (256)
T ss_pred -------------------------CCchhhCHHHHHHHHHHcCCCcccCCCHHHHhcCCCC
Confidence 0112368889999999999999999999999999974
No 267
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=2.8e-41 Score=288.21 Aligned_cols=254 Identities=28% Similarity=0.433 Sum_probs=199.6
Q ss_pred hhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCC
Q 035861 10 VFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDH 89 (332)
Q Consensus 10 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 89 (332)
+++|++.+.||.|++|.||++.+..++..++||.+.......... ...+.+|+..++.+.|+||+++++.+.++
T Consensus 1 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~-----~~~~~~e~~~l~~~~h~~i~~~~~~~~~~- 74 (267)
T cd08229 1 LANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKA-----RADCIKEIDLLKQLNHPNVIKYYASFIED- 74 (267)
T ss_pred CchhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHH-----HHHHHHHHHHHHHccCCchhhhhheeEeC-
Confidence 368999999999999999999999899999999887543222111 12466899999999999999999998655
Q ss_pred CeEEEEccccccc-HHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeeccccc
Q 035861 90 DSVYMVMEYMEHD-LKWLMES---MKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSR 165 (332)
Q Consensus 90 ~~~~lv~e~~~~~-l~~~~~~---~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~ 165 (332)
...++++|+++|+ +.+.+.. ....+++..++.++.||+.||+|||++|++|+||+|+||+++.++.++|+|||.+.
T Consensus 75 ~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~ 154 (267)
T cd08229 75 NELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGR 154 (267)
T ss_pred CeEEEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEECcchhhh
Confidence 7889999999974 4444432 24568999999999999999999999999999999999999999999999999887
Q ss_pred ccCCCCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChH--HHHHHHHHHcCCCCCCccc
Q 035861 166 QYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEV--DQIDKIFKTLGTPTETIWP 243 (332)
Q Consensus 166 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~--~~~~~~~~~~~~~~~~~~~ 243 (332)
.............++..|+|||.+.+ ..++.++|+||||+++|+|++|..||...... .....+....
T Consensus 155 ~~~~~~~~~~~~~~~~~~~ape~~~~-~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~--------- 224 (267)
T cd08229 155 FFSSKTTAAHSLVGTPYYMSPERIHE-NGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCD--------- 224 (267)
T ss_pred ccccCCcccccccCCcCccCHHHhcC-CCccchhhHHHHHHHHHHHHhCCCCcccccchHHHHhhhhhcCC---------
Confidence 65433333334567889999999876 56889999999999999999999999654322 1111111100
Q ss_pred CCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhc
Q 035861 244 GLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALN 305 (332)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 305 (332)
........++..+.+++.+||+.||++|||+.+|++
T Consensus 225 --------------------------~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~ 260 (267)
T cd08229 225 --------------------------YPPLPSDHYSEELRQLVNMCINPDPEKRPDITYVYD 260 (267)
T ss_pred --------------------------CCCCCcccccHHHHHHHHHhcCCCcccCCCHHHHHH
Confidence 000011236889999999999999999999997764
No 268
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=2.3e-41 Score=301.84 Aligned_cols=252 Identities=22% Similarity=0.350 Sum_probs=193.6
Q ss_pred hcccccccccccCcEEEEEEEE-----CCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhC-CCCCeeeeeee
Q 035861 11 FEFEKLNKISEGTYGIVYRARD-----KKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSF-DHPSIVNVKEV 84 (332)
Q Consensus 11 ~~y~~~~~lg~g~~g~v~~~~~-----~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~ 84 (332)
++|++.+.||+|+||+||+|++ ..++..||||++........ ...+.+|+.++..+ +||||+++++.
T Consensus 35 ~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~-------~~~~~~Ei~il~~l~~HpnIv~l~~~ 107 (375)
T cd05104 35 NRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTE-------REALMSELKVLSYLGNHINIVNLLGA 107 (375)
T ss_pred HHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHH-------HHHHHHHHHHHHHhcCCcceeeeeee
Confidence 4899999999999999999974 34567899999864322111 12467899999999 89999999999
Q ss_pred EEcCCCeEEEEcccccc-cHHHHHHhcC----------------------------------------------------
Q 035861 85 VMDDHDSVYMVMEYMEH-DLKWLMESMK---------------------------------------------------- 111 (332)
Q Consensus 85 ~~~~~~~~~lv~e~~~~-~l~~~~~~~~---------------------------------------------------- 111 (332)
+.. ....++||||++| ++.+.+....
T Consensus 108 ~~~-~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 186 (375)
T cd05104 108 CTV-GGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKR 186 (375)
T ss_pred ecc-CCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccc
Confidence 844 4778999999986 4444443211
Q ss_pred ----------------------CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCC
Q 035861 112 ----------------------QPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGS 169 (332)
Q Consensus 112 ----------------------~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~ 169 (332)
..+++..+..++.||+.||+|||++|++|+||||+||+++.++.++|+|||++.....
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~ 266 (375)
T cd05104 187 RSVRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIRN 266 (375)
T ss_pred cccccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEECCCcEEEecCccceeccC
Confidence 2478889999999999999999999999999999999999999999999999876533
Q ss_pred CCC--CCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCCCCCCcccCCC
Q 035861 170 PLK--PYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA-KKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLS 246 (332)
Q Consensus 170 ~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (332)
... ......++..|+|||.+.+ ..++.++|+||||+++|+|++ |..||..........+.......
T Consensus 267 ~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~---------- 335 (375)
T cd05104 267 DSNYVVKGNARLPVKWMAPESIFN-CVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIKEGYR---------- 335 (375)
T ss_pred cccccccCCCCCCcceeChhHhcC-CCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHHhCcc----------
Confidence 211 1112234567999999977 678999999999999999998 88898765544333333221100
Q ss_pred CCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcC
Q 035861 247 ELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNH 306 (332)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 306 (332)
...+...+.++.+|+.+||+.||++||++.+|++.
T Consensus 336 -------------------------~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 370 (375)
T cd05104 336 -------------------------MLSPECAPSEMYDIMKSCWDADPLKRPTFKQIVQL 370 (375)
T ss_pred -------------------------CCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHH
Confidence 00112257789999999999999999999999864
No 269
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=2.6e-41 Score=291.86 Aligned_cols=268 Identities=25% Similarity=0.396 Sum_probs=205.4
Q ss_pred cccccccccccCcEEEEEEEEC---CCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhC-CCCCeeeeeeeEEc
Q 035861 12 EFEKLNKISEGTYGIVYRARDK---KSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSF-DHPSIVNVKEVVMD 87 (332)
Q Consensus 12 ~y~~~~~lg~g~~g~v~~~~~~---~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~ 87 (332)
.|++.+.||.|++|.||++... .+|..||+|++.......... ....+.+|+.+++++ .|++|+.+++.+.
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~----~~~~~~~e~~~l~~l~~~~~i~~~~~~~~- 75 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAK----TTEHTRTERQVLEHIRQSPFLVTLHYAFQ- 75 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcch----HHHHHHHHHHHHHhcccCCChhceeeEee-
Confidence 4889999999999999999874 478999999987533211111 112355799999999 5899999998884
Q ss_pred CCCeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeeccccccc
Q 035861 88 DHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQY 167 (332)
Q Consensus 88 ~~~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~ 167 (332)
.+...++|+||++++.+.........+++..+..++.|++.||.+||+.|++|+||+|+||+++.++.++|+|||.+...
T Consensus 76 ~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~ 155 (290)
T cd05613 76 TDTKLHLILDYINGGELFTHLSQRERFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEF 155 (290)
T ss_pred cCCeEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEECCCCCEEEeeCccceec
Confidence 44788999999997554444444677999999999999999999999999999999999999999999999999988765
Q ss_pred CCCC-CCCccccccccccchhhhcCC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCC
Q 035861 168 GSPL-KPYTSLVVTLWYRAPELLLGA-KKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGL 245 (332)
Q Consensus 168 ~~~~-~~~~~~~~~~~y~aPE~~~~~-~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (332)
.... .......++..|+|||.+... ..++.++|+||||+++|++++|..||...........+.......
T Consensus 156 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~-------- 227 (290)
T cd05613 156 HEDEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRILKS-------- 227 (290)
T ss_pred ccccccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHHhhcc--------
Confidence 3321 122234578889999998652 346789999999999999999999996543222222222111000
Q ss_pred CCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCC-----CHHHHhcCCCCCCCCCCCC
Q 035861 246 SELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRI-----TVDDALNHYWFHEVPLPKS 317 (332)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp-----s~~ell~hp~f~~~~~~~~ 317 (332)
....+..+++.+.+++.+||+.||++|| +++++++||||..+++...
T Consensus 228 -------------------------~~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~~~~~ 279 (290)
T cd05613 228 -------------------------EPPYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKHPFFQKINWDDL 279 (290)
T ss_pred -------------------------CCCCCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcCcccccCCHHHH
Confidence 0001223688899999999999999997 8999999999999997654
No 270
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=2.8e-41 Score=295.10 Aligned_cols=251 Identities=22% Similarity=0.379 Sum_probs=197.0
Q ss_pred hhcccccccccccCcEEEEEEEECCCCcE----EEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeE
Q 035861 10 VFEFEKLNKISEGTYGIVYRARDKKSGEI----VALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVV 85 (332)
Q Consensus 10 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~----v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~ 85 (332)
..+|++.+.||+|+||+||+|++..++.. ||+|++........ ...+.+|+.+++.+.||||+++++.+
T Consensus 6 ~~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~-------~~~~~~e~~~l~~l~h~niv~~~g~~ 78 (316)
T cd05108 6 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA-------NKEILDEAYVMASVDNPHVCRLLGIC 78 (316)
T ss_pred hhhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHH-------HHHHHHHHHHHHhCCCCCCCeEEEEE
Confidence 45899999999999999999998665554 88998864321111 12466899999999999999999998
Q ss_pred EcCCCeEEEEcccccc-cHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccc
Q 035861 86 MDDHDSVYMVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMS 164 (332)
Q Consensus 86 ~~~~~~~~lv~e~~~~-~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~ 164 (332)
..+ ..+++++++.+ ++.+.+......+++..+..++.||+.||+|||+.|++|+||||+||+++.++.++|+|||.+
T Consensus 79 ~~~--~~~~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill~~~~~~kl~DfG~a 156 (316)
T cd05108 79 LTS--TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLVKTPQHVKITDFGLA 156 (316)
T ss_pred cCC--CceeeeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEecCCCcEEEcccccc
Confidence 543 46788999885 566666665667899999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCC--CccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCCCCCCc
Q 035861 165 RQYGSPLKP--YTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA-KKPLFSGTTEVDQIDKIFKTLGTPTETI 241 (332)
Q Consensus 165 ~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 241 (332)
......... .....++..|+|||.+.. ..++.++|+||||+++|++++ |..||.+....+... +.....
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~y~apE~~~~-~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~~~~-~~~~~~------ 228 (316)
T cd05108 157 KLLGADEKEYHAEGGKVPIKWMALESILH-RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISS-ILEKGE------ 228 (316)
T ss_pred ccccCCCcceeccCCccceeecChHHhcc-CCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHH-HHhCCC------
Confidence 865432221 122234567999999876 678999999999999999998 999998766544322 222110
Q ss_pred ccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcC
Q 035861 242 WPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNH 306 (332)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 306 (332)
....++.++.++.+++.+||+.+|++||++.+++.+
T Consensus 229 -----------------------------~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~ 264 (316)
T cd05108 229 -----------------------------RLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIE 264 (316)
T ss_pred -----------------------------CCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 011122367889999999999999999999999987
No 271
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=4.4e-41 Score=290.16 Aligned_cols=249 Identities=24% Similarity=0.389 Sum_probs=195.9
Q ss_pred hcccccccccccCcEEEEEEEE-----CCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeE
Q 035861 11 FEFEKLNKISEGTYGIVYRARD-----KKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVV 85 (332)
Q Consensus 11 ~~y~~~~~lg~g~~g~v~~~~~-----~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~ 85 (332)
++|.+.+.||+|+||+||++.. ..++..+++|.+....... ...+.+|+..+++++|+||+++++.+
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~--------~~~~~~e~~~l~~l~h~~i~~~~~~~ 76 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNA--------RKDFHREAELLTNLQHEHIVKFYGVC 76 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHH--------HHHHHHHHHHHHhCCCCCcceEEEEE
Confidence 4799999999999999999985 2345678899886432111 11467899999999999999999998
Q ss_pred EcCCCeEEEEccccccc-HHHHHHhcC------------CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcC
Q 035861 86 MDDHDSVYMVMEYMEHD-LKWLMESMK------------QPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNN 152 (332)
Q Consensus 86 ~~~~~~~~lv~e~~~~~-l~~~~~~~~------------~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~ 152 (332)
.. ....++|+||++++ +.+.+.... ..+++..++.++.|++.||+|||++|++|+||||+||+++.
T Consensus 77 ~~-~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~~ 155 (288)
T cd05093 77 VE-GDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGE 155 (288)
T ss_pred ec-CCccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEcc
Confidence 54 47899999999864 444443221 24899999999999999999999999999999999999999
Q ss_pred CCcEEEeecccccccCCCCC--CCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHH
Q 035861 153 QGVLKICDFGMSRQYGSPLK--PYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA-KKPLFSGTTEVDQIDK 229 (332)
Q Consensus 153 ~~~~~l~df~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~llt-g~~pf~~~~~~~~~~~ 229 (332)
++.++|+|||.+........ ......++..|+|||.+.+ ..++.++|+||||+++|+|++ |..||...........
T Consensus 156 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~~~~~ 234 (288)
T cd05093 156 NLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMY-RKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIEC 234 (288)
T ss_pred CCcEEeccCCccccccCCceeecCCCCCccccccCHHHhcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Confidence 99999999999875432211 1122334678999999876 678999999999999999998 8999987776665555
Q ss_pred HHHHcCCCCCCcccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhc
Q 035861 230 IFKTLGTPTETIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALN 305 (332)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 305 (332)
+....... ....++.++.+|+.+||+.||.+||++.++++
T Consensus 235 i~~~~~~~------------------------------------~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~ 274 (288)
T cd05093 235 ITQGRVLQ------------------------------------RPRTCPKEVYDLMLGCWQREPHMRLNIKEIHS 274 (288)
T ss_pred HHcCCcCC------------------------------------CCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 54321110 11226788999999999999999999999864
No 272
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=2.3e-41 Score=301.57 Aligned_cols=252 Identities=22% Similarity=0.335 Sum_probs=193.7
Q ss_pred hhcccccccccccCcEEEEEEEECCC-----CcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhC-CCCCeeeeee
Q 035861 10 VFEFEKLNKISEGTYGIVYRARDKKS-----GEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSF-DHPSIVNVKE 83 (332)
Q Consensus 10 ~~~y~~~~~lg~g~~g~v~~~~~~~~-----~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~ 83 (332)
.++|++.+.||+|+||.||+|++..+ +..||+|++........ ...+.+|+.+++.+ +|+||+++++
T Consensus 37 ~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~-------~~~~~~E~~il~~l~~h~nIv~~~~ 109 (374)
T cd05106 37 RDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDE-------REALMSELKILSHLGQHKNIVNLLG 109 (374)
T ss_pred HHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHH-------HHHHHHHHHHHHhhccCCceeeEee
Confidence 45799999999999999999986443 35799999975432211 12456899999999 8999999999
Q ss_pred eEEcCCCeEEEEcccccc-cHHHHHHhc----------------------------------------------------
Q 035861 84 VVMDDHDSVYMVMEYMEH-DLKWLMESM---------------------------------------------------- 110 (332)
Q Consensus 84 ~~~~~~~~~~lv~e~~~~-~l~~~~~~~---------------------------------------------------- 110 (332)
.+... ...++||||+++ ++.+.+...
T Consensus 110 ~~~~~-~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (374)
T cd05106 110 ACTHG-GPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVS 188 (374)
T ss_pred EecCC-CCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcc
Confidence 98444 789999999986 444444321
Q ss_pred -----------------CCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCCCCC-
Q 035861 111 -----------------KQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLK- 172 (332)
Q Consensus 111 -----------------~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~~~~- 172 (332)
..++++..++.++.||+.||+|||++|++|+||||+||+++.++.++|+|||++........
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~ 268 (374)
T cd05106 189 SSSSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNY 268 (374)
T ss_pred ccccccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEeCCCeEEEeeceeeeeccCCcce
Confidence 12478889999999999999999999999999999999999999999999999876532211
Q ss_pred -CCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCCcc
Q 035861 173 -PYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA-KKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPG 250 (332)
Q Consensus 173 -~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (332)
......++..|+|||++.. ..++.++|+||||+++|+|++ |..||..................
T Consensus 269 ~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~~~~~~~-------------- 333 (374)
T cd05106 269 VVKGNARLPVKWMAPESIFD-CVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMVKRGYQ-------------- 333 (374)
T ss_pred eeccCCCCccceeCHHHhcC-CCCCccccHHHHHHHHHHHHhCCCCCCccccccHHHHHHHHcccC--------------
Confidence 1112234567999999876 678999999999999999997 99999765443333333221100
Q ss_pred ccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhc
Q 035861 251 AKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALN 305 (332)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 305 (332)
...+..+++++.+++.+||+.||.+||++.+|++
T Consensus 334 ---------------------~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~ 367 (374)
T cd05106 334 ---------------------MSRPDFAPPEIYSIMKMCWNLEPTERPTFSQISQ 367 (374)
T ss_pred ---------------------ccCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 0011226889999999999999999999999975
No 273
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=3.3e-41 Score=289.71 Aligned_cols=251 Identities=26% Similarity=0.399 Sum_probs=198.8
Q ss_pred hhcccccccccccCcEEEEEEEECC-----CCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeee
Q 035861 10 VFEFEKLNKISEGTYGIVYRARDKK-----SGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEV 84 (332)
Q Consensus 10 ~~~y~~~~~lg~g~~g~v~~~~~~~-----~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~ 84 (332)
..+|.+.+.||+|++|.||+|.... ++..||+|.+........ ...+.+|+++++.+.|+||+++++.
T Consensus 4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~-------~~~~~~e~~~l~~l~~~~i~~~~~~ 76 (280)
T cd05049 4 RDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDA-------RKDFEREAELLTNFQHENIVKFYGV 76 (280)
T ss_pred hHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHH-------HHHHHHHHHHHHhcCCCCchheeeE
Confidence 4579999999999999999998743 457899999865432210 1256789999999999999999999
Q ss_pred EEcCCCeEEEEcccccccH-HHHHHhc-------------CCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEE
Q 035861 85 VMDDHDSVYMVMEYMEHDL-KWLMESM-------------KQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLL 150 (332)
Q Consensus 85 ~~~~~~~~~lv~e~~~~~l-~~~~~~~-------------~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili 150 (332)
+..+ ...++||||++|+. .+.+... ...+++..+..++.|++.||++||++|++|+||+|+||++
T Consensus 77 ~~~~-~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili 155 (280)
T cd05049 77 CTEG-DPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLV 155 (280)
T ss_pred EecC-CCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccccceEEE
Confidence 9555 78999999998654 4444332 2347899999999999999999999999999999999999
Q ss_pred cCCCcEEEeecccccccCCCC--CCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHH
Q 035861 151 NNQGVLKICDFGMSRQYGSPL--KPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA-KKPLFSGTTEVDQI 227 (332)
Q Consensus 151 ~~~~~~~l~df~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~llt-g~~pf~~~~~~~~~ 227 (332)
+.++.++|+|||.+....... .......++..|+|||.+.+ ..++.++|+||||+++|+|++ |..||...+..+..
T Consensus 156 ~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~~~ 234 (280)
T cd05049 156 GYDLVVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMY-RKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEVI 234 (280)
T ss_pred cCCCeEEECCcccceecccCcceecCCCCcccceecChhhhcc-CCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHH
Confidence 999999999999887542211 11223345678999999877 678999999999999999998 99999877766655
Q ss_pred HHHHHHcCCCCCCcccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhc
Q 035861 228 DKIFKTLGTPTETIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALN 305 (332)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 305 (332)
..+...... .....++..+.+++.+||+.||++||++.|+++
T Consensus 235 ~~~~~~~~~------------------------------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~ 276 (280)
T cd05049 235 ECITQGRLL------------------------------------QRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHE 276 (280)
T ss_pred HHHHcCCcC------------------------------------CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 544322111 111237889999999999999999999999985
No 274
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=4.9e-41 Score=286.56 Aligned_cols=252 Identities=26% Similarity=0.412 Sum_probs=200.0
Q ss_pred hhcccccccccccCcEEEEEEEECCC---CcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEE
Q 035861 10 VFEFEKLNKISEGTYGIVYRARDKKS---GEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVM 86 (332)
Q Consensus 10 ~~~y~~~~~lg~g~~g~v~~~~~~~~---~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~ 86 (332)
.++|++.+.||+|+||+||+|.+..+ ...+++|.+........ ...+.+|+..+++++|+||+++++.+.
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~-------~~~~~~e~~~l~~l~h~~i~~~~~~~~ 75 (266)
T cd05033 3 PSYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQ-------RLDFLTEASIMGQFDHPNIIRLEGVVT 75 (266)
T ss_pred hHHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHH-------HHHHHHHHHHHHhCCCCCcceEeEEEe
Confidence 46899999999999999999998643 45799998864332111 124568999999999999999999885
Q ss_pred cCCCeEEEEcccccc-cHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeeccccc
Q 035861 87 DDHDSVYMVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSR 165 (332)
Q Consensus 87 ~~~~~~~lv~e~~~~-~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~ 165 (332)
. ....+++||++++ ++.+.+....+.+++..+..++.|++.||++||++|++|+||+|+||+++.++.++|+|||.+.
T Consensus 76 ~-~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili~~~~~~~l~dfg~~~ 154 (266)
T cd05033 76 K-SRPVMIITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSR 154 (266)
T ss_pred c-CCceEEEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCCEEECccchhh
Confidence 4 4778999999987 5555555545679999999999999999999999999999999999999999999999999988
Q ss_pred ccCCCCCCC--ccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCCCCCCcc
Q 035861 166 QYGSPLKPY--TSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA-KKPLFSGTTEVDQIDKIFKTLGTPTETIW 242 (332)
Q Consensus 166 ~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 242 (332)
......... ....++..|+|||.+.. ..++.++|+||||+++|++++ |..||...........+......+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~y~~Pe~~~~-~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~----- 228 (266)
T cd05033 155 RLEDSEATYTTKGGKIPIRWTAPEAIAY-RKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAVEDGYRLP----- 228 (266)
T ss_pred cccccccceeccCCCCCccccChhhhcc-CCCccccchHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHcCCCCC-----
Confidence 764211111 12234567999999876 668999999999999999998 999997766655554443221111
Q ss_pred cCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcC
Q 035861 243 PGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNH 306 (332)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 306 (332)
.+..++..+.+|+.+||+.+|++||++++++++
T Consensus 229 -------------------------------~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~ 261 (266)
T cd05033 229 -------------------------------PPMDCPSALYQLMLDCWQKDRNERPTFSQIVST 261 (266)
T ss_pred -------------------------------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 112368889999999999999999999999874
No 275
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=5.6e-41 Score=283.89 Aligned_cols=244 Identities=24% Similarity=0.428 Sum_probs=190.8
Q ss_pred ccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCCeEEEEc
Q 035861 17 NKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHDSVYMVM 96 (332)
Q Consensus 17 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~lv~ 96 (332)
+.||+|++|+||+|++..+++.+|+|.+....... ....+.+|++++++++|+||+++++++.. ....++||
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~-------~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~ 72 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPD-------LKAKFLQEARILKQYSHPNIVRLIGVCTQ-KQPIYIVM 72 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHH-------HHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCeEEEE
Confidence 46999999999999999899999999875432111 11246789999999999999999999844 47789999
Q ss_pred cccccc-HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCCCCCC--
Q 035861 97 EYMEHD-LKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKP-- 173 (332)
Q Consensus 97 e~~~~~-l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~~~~~-- 173 (332)
||++++ +.+.+......+++..++.++.|++.||+|||++|++|+||+|+||+++.++.++|+|||.+.........
T Consensus 73 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~ 152 (252)
T cd05084 73 ELVQGGDFLTFLRTEGPRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYAST 152 (252)
T ss_pred eeccCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEEcCCCcEEECccccCccccccccccc
Confidence 999864 45455444556899999999999999999999999999999999999999999999999998754321111
Q ss_pred CccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCCcccc
Q 035861 174 YTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA-KKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGAK 252 (332)
Q Consensus 174 ~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (332)
......+..|+|||.+.+ ..++.++|+||||+++|++++ |..||...........+.....
T Consensus 153 ~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~~~~~~~----------------- 214 (252)
T cd05084 153 GGMKQIPVKWTAPEALNY-GRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIEQGVR----------------- 214 (252)
T ss_pred CCCCCCceeecCchhhcC-CCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHHHHcCCC-----------------
Confidence 111123456999999876 568999999999999999998 8888876655443333322110
Q ss_pred ccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhc
Q 035861 253 ANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALN 305 (332)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 305 (332)
...+..++..+.+|+.+||+.+|++||++.++++
T Consensus 215 -------------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~ 248 (252)
T cd05084 215 -------------------LPCPELCPDAVYRLMERCWEYDPGQRPSFSTVHQ 248 (252)
T ss_pred -------------------CCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 0112236889999999999999999999999975
No 276
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=8.8e-42 Score=289.87 Aligned_cols=247 Identities=32% Similarity=0.518 Sum_probs=192.7
Q ss_pred cccccccccCcEEEEEEEEC----CCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCC
Q 035861 14 EKLNKISEGTYGIVYRARDK----KSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDH 89 (332)
Q Consensus 14 ~~~~~lg~g~~g~v~~~~~~----~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 89 (332)
.+.+.||.|.||.||+|.+. ..+..|+||.+........ ...+.+|++.+++++||||+++++++...
T Consensus 2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~-------~~~~~~e~~~l~~l~h~ni~~~~g~~~~~- 73 (259)
T PF07714_consen 2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEE-------EEEFLNEIQILRKLRHPNIVKLYGFCIEN- 73 (259)
T ss_dssp EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHH-------HHHHHHHHHHHHTHSBTTBE-EEEEEESS-
T ss_pred EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEecccccccc-------ceeeeeccccccccccccccccccccccc-
Confidence 46788999999999999988 4567899999954322111 12567999999999999999999999744
Q ss_pred CeEEEEccccc-ccHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeeccccccc
Q 035861 90 DSVYMVMEYME-HDLKWLMESM-KQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQY 167 (332)
Q Consensus 90 ~~~~lv~e~~~-~~l~~~~~~~-~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~ 167 (332)
...++|+||++ |++.+.+... ...+++..++.|+.||+.||+|||+++++|++|+++||+++.++.+||+|||.+...
T Consensus 74 ~~~~lv~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~ 153 (259)
T PF07714_consen 74 EPLFLVMEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILLDSNGQVKLSDFGLSRPI 153 (259)
T ss_dssp SSEEEEEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEETTTEEEEESTTTGEET
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 66899999998 5677777765 577999999999999999999999999999999999999999999999999998776
Q ss_pred CCC--CCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCCCCCCcccC
Q 035861 168 GSP--LKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA-KKPLFSGTTEVDQIDKIFKTLGTPTETIWPG 244 (332)
Q Consensus 168 ~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (332)
... ............|+|||.+.. ..++.++||||||+++||+++ |..||...+..+....+......+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~aPE~~~~-~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~~~~~~~~~~~~------- 225 (259)
T PF07714_consen 154 SEKSKYKNDSSQQLPLRYLAPEVLKD-GEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEEIIEKLKQGQRLP------- 225 (259)
T ss_dssp TTSSSEEESTTSESGGGGS-HHHHHH-SEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHHHHHHHTTEETT-------
T ss_pred cccccccccccccccccccccccccc-ccccccccccccccccccccccccccccccccccccccccccccce-------
Confidence 221 111233446678999999987 558999999999999999999 789998887777666664332111
Q ss_pred CCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhc
Q 035861 245 LSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALN 305 (332)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 305 (332)
.+..++..+.++|.+||+.||++||++.+|++
T Consensus 226 -----------------------------~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~ 257 (259)
T PF07714_consen 226 -----------------------------IPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQ 257 (259)
T ss_dssp -----------------------------SBTTSBHHHHHHHHHHT-SSGGGS--HHHHHH
T ss_pred -----------------------------eccchhHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 12236888999999999999999999999975
No 277
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=7.3e-41 Score=283.87 Aligned_cols=245 Identities=24% Similarity=0.395 Sum_probs=197.6
Q ss_pred chhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcC
Q 035861 9 SVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDD 88 (332)
Q Consensus 9 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 88 (332)
.+.+|++.+.||+|++|.||++... +..+++|.+..... ...+.+|+..+++++|++++++++.+...
T Consensus 4 ~~~~~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~~----------~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 71 (256)
T cd05082 4 NMKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDAT----------AQAFLAEASVMTQLRHSNLVQLLGVIVEE 71 (256)
T ss_pred cHHhCeeeeeecccCCCeEEEEEEc--CCcEEEEEeCCCch----------HHHHHHHHHHHHhCCCCCeeeEEEEEEcC
Confidence 4568999999999999999999876 77899998854321 11456899999999999999999987666
Q ss_pred CCeEEEEcccccc-cHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccc
Q 035861 89 HDSVYMVMEYMEH-DLKWLMESMKQ-PFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQ 166 (332)
Q Consensus 89 ~~~~~lv~e~~~~-~l~~~~~~~~~-~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~ 166 (332)
....++++||+++ ++.+.+..... .+++..+..++.|++.||++||++|++|+||+|+||+++.++.++|+|||.+..
T Consensus 72 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~ 151 (256)
T cd05082 72 KGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLVSEDNVAKVSDFGLTKE 151 (256)
T ss_pred CCceEEEEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEEcCCCcEEecCCcccee
Confidence 6778999999986 55555554333 489999999999999999999999999999999999999999999999999876
Q ss_pred cCCCCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCCCCCCcccCC
Q 035861 167 YGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA-KKPLFSGTTEVDQIDKIFKTLGTPTETIWPGL 245 (332)
Q Consensus 167 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (332)
..... ....++..|+|||.+.. ..++.++|+||||+++|+|++ |..||...+..+....+.....
T Consensus 152 ~~~~~---~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~~---------- 217 (256)
T cd05082 152 ASSTQ---DTGKLPVKWTAPEALRE-KKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYK---------- 217 (256)
T ss_pred ccccC---CCCccceeecCHHHHcc-CCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCC----------
Confidence 43221 23344567999999876 668899999999999999997 9999987665544444322110
Q ss_pred CCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhc
Q 035861 246 SELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALN 305 (332)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 305 (332)
....+.+++.+.+++.+||+.+|++||++.++++
T Consensus 218 --------------------------~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~ 251 (256)
T cd05082 218 --------------------------MDAPDGCPPVVYDVMKQCWHLDAATRPSFLQLRE 251 (256)
T ss_pred --------------------------CCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 0112237889999999999999999999999975
No 278
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=2.5e-41 Score=297.41 Aligned_cols=253 Identities=23% Similarity=0.380 Sum_probs=195.8
Q ss_pred hcccccccccccCcEEEEEEEECC-----CCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhC-CCCCeeeeeee
Q 035861 11 FEFEKLNKISEGTYGIVYRARDKK-----SGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSF-DHPSIVNVKEV 84 (332)
Q Consensus 11 ~~y~~~~~lg~g~~g~v~~~~~~~-----~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~ 84 (332)
++|++.+.||.|+||.||+|.... +++.||+|++........ ...+..|+..+.++ .|+||+++++.
T Consensus 7 ~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~-------~~~~~~E~~~~~~l~~h~niv~~~~~ 79 (337)
T cd05054 7 DRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASE-------YKALMTELKILIHIGHHLNVVNLLGA 79 (337)
T ss_pred HHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHH-------HHHHHHHHHHHHhhccCcchhheeee
Confidence 489999999999999999997543 457899998864322111 11356899999999 89999999998
Q ss_pred EEcCCCeEEEEcccccccHH-HHHHhc-----------------------------------------------------
Q 035861 85 VMDDHDSVYMVMEYMEHDLK-WLMESM----------------------------------------------------- 110 (332)
Q Consensus 85 ~~~~~~~~~lv~e~~~~~l~-~~~~~~----------------------------------------------------- 110 (332)
+...+...++++||++|+.+ +.+...
T Consensus 80 ~~~~~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (337)
T cd05054 80 CTKPGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEED 159 (337)
T ss_pred EecCCCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccc
Confidence 87776789999999997544 333321
Q ss_pred -------CCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCCCCC--CCccccccc
Q 035861 111 -------KQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLK--PYTSLVVTL 181 (332)
Q Consensus 111 -------~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~~~~--~~~~~~~~~ 181 (332)
...+++..+..++.||+.||+|||++||+|+||||.||+++.++.++|+|||++........ ......++.
T Consensus 160 ~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~ 239 (337)
T cd05054 160 EEGDELYKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPL 239 (337)
T ss_pred hhhhHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCc
Confidence 12678999999999999999999999999999999999999999999999999976532211 112334567
Q ss_pred cccchhhhcCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCCccccccccCCch
Q 035861 182 WYRAPELLLGAKKYSTAVDMWSVGCIMAELLA-KKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGAKANFAKQPY 260 (332)
Q Consensus 182 ~y~aPE~~~~~~~~~~~sDi~slG~~l~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (332)
.|+|||++.+ ..++.++|+||||+++|++++ |..||......+..........
T Consensus 240 ~y~aPE~~~~-~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~------------------------- 293 (337)
T cd05054 240 KWMAPESIFD-KVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKEGT------------------------- 293 (337)
T ss_pred cccCcHHhcC-CCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhccC-------------------------
Confidence 7999999877 678999999999999999998 9999976544333322222100
Q ss_pred hhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcC
Q 035861 261 NLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNH 306 (332)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 306 (332)
....+..+++++.+++.+||+.+|++||+++|+++|
T Consensus 294 ----------~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~ell~~ 329 (337)
T cd05054 294 ----------RMRAPEYATPEIYSIMLDCWHNNPEDRPTFSELVEI 329 (337)
T ss_pred ----------CCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 000112367889999999999999999999999875
No 279
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=1.3e-40 Score=283.68 Aligned_cols=259 Identities=26% Similarity=0.412 Sum_probs=204.5
Q ss_pred hcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcC-C
Q 035861 11 FEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDD-H 89 (332)
Q Consensus 11 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-~ 89 (332)
.+|++.+.||+|++|.||++.+..++..+++|.+.......... .....+.+|+..+++++|+||+++++.+.+. .
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~---~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~ 78 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETS---KEVNALECEIQLLKNLRHDRIVQYYGCLRDPEE 78 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhh---HHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCC
Confidence 47999999999999999999999999999999886432211110 1112566899999999999999999988554 3
Q ss_pred CeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCC
Q 035861 90 DSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGS 169 (332)
Q Consensus 90 ~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~ 169 (332)
..+++++|+++|+.+.......+.+++..+..++.|++.||.+||+.|++|+||+|+||+++.++.++|+|||.+.....
T Consensus 79 ~~~~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~ 158 (264)
T cd06653 79 KKLSIFVEYMPGGSIKDQLKAYGALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRIQT 158 (264)
T ss_pred CEEEEEEEeCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECcccccccccc
Confidence 56889999998765544444456799999999999999999999999999999999999999999999999999876532
Q ss_pred CC---CCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCC
Q 035861 170 PL---KPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLS 246 (332)
Q Consensus 170 ~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (332)
.. .......++..|+|||.+.+ ..++.++|+||||+++|++++|..||..........++.. .+..
T Consensus 159 ~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~---~~~~------- 227 (264)
T cd06653 159 ICMSGTGIKSVTGTPYWMSPEVISG-EGYGRKADVWSVACTVVEMLTEKPPWAEYEAMAAIFKIAT---QPTK------- 227 (264)
T ss_pred ccccCccccccCCcccccCHhhhcC-CCCCccccHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHc---CCCC-------
Confidence 11 11223457888999999877 5688999999999999999999999987655544433321 1111
Q ss_pred CCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCC
Q 035861 247 ELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWF 309 (332)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f 309 (332)
...+..+++.+.++|.+||. +|..||++.++++|||.
T Consensus 228 -------------------------~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~~~~~ 264 (264)
T cd06653 228 -------------------------PMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLRHPFV 264 (264)
T ss_pred -------------------------CCCCcccCHHHHHHHHHHhc-CcccCccHHHHhcCCCC
Confidence 11123378899999999999 47999999999999983
No 280
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=9.8e-41 Score=283.91 Aligned_cols=249 Identities=21% Similarity=0.347 Sum_probs=198.1
Q ss_pred chhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcC
Q 035861 9 SVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDD 88 (332)
Q Consensus 9 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 88 (332)
..++|+++++||+|++|.||+|... ++..|++|.+...... ...+.+|+.+++.++|+||+++++.+ .+
T Consensus 4 ~~~~~~~~~~lg~g~~g~v~~~~~~-~~~~v~iK~~~~~~~~---------~~~~~~e~~~l~~l~h~~i~~~~~~~-~~ 72 (261)
T cd05072 4 PRESIKLVKKLGAGQFGEVWMGYYN-NSTKVAVKTLKPGTMS---------VQAFLEEANLMKTLQHDKLVRLYAVV-TK 72 (261)
T ss_pred chHHeEEeeecCCcCCceEEEEEec-CCceEEEEEccCCchh---------HHHHHHHHHHHHhCCCCCeeeEEEEE-cC
Confidence 3578999999999999999999875 4567999987543211 12467899999999999999999988 44
Q ss_pred CCeEEEEcccccc-cHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccc
Q 035861 89 HDSVYMVMEYMEH-DLKWLMESM-KQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQ 166 (332)
Q Consensus 89 ~~~~~lv~e~~~~-~l~~~~~~~-~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~ 166 (332)
....++++|++++ ++.+.+... ...+++..+..++.|++.||+|||+.|++|+||+|+||+++.++.++|+|||.+..
T Consensus 73 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~ 152 (261)
T cd05072 73 EEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARV 152 (261)
T ss_pred CCCcEEEEecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEecCCCcEEECCCcccee
Confidence 5778999999976 555555432 35689999999999999999999999999999999999999999999999999976
Q ss_pred cCCCCC-CCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCCCCCCcccC
Q 035861 167 YGSPLK-PYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA-KKPLFSGTTEVDQIDKIFKTLGTPTETIWPG 244 (332)
Q Consensus 167 ~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (332)
...... ......++..|+|||.+.. ..++.++|+||||+++|+|++ |..||...........+......
T Consensus 153 ~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~-------- 223 (261)
T cd05072 153 IEDNEYTAREGAKFPIKWTAPEAINF-GSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQRGYRM-------- 223 (261)
T ss_pred cCCCceeccCCCccceecCCHHHhcc-CCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHHHHHHcCCCC--------
Confidence 543221 1223345667999999876 668899999999999999998 99999877665555444322110
Q ss_pred CCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhc
Q 035861 245 LSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALN 305 (332)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 305 (332)
.....++.++.+++.+||..+|++||+++++++
T Consensus 224 ----------------------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 256 (261)
T cd05072 224 ----------------------------PRMENCPDELYDIMKTCWKEKAEERPTFDYLQS 256 (261)
T ss_pred ----------------------------CCCCCCCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 111236888999999999999999999999875
No 281
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=1.5e-40 Score=283.65 Aligned_cols=253 Identities=28% Similarity=0.465 Sum_probs=200.0
Q ss_pred hcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCC
Q 035861 11 FEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHD 90 (332)
Q Consensus 11 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 90 (332)
++|++.+.||.|++|.||+|....+++.+++|.+.......... ...+.+|++.+++++|++++.+++.+..+ .
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~-----~~~~~~ei~~l~~~~~~~i~~~~~~~~~~-~ 75 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKA-----RQDCLKEIDLLKQLDHPNVIKYLASFIEN-N 75 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhh-----HHHHHHHHHHHHhCCCCCeeeeeeeeecC-C
Confidence 58999999999999999999999899999999987543222111 12567899999999999999999999655 7
Q ss_pred eEEEEcccccc-cHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccc
Q 035861 91 SVYMVMEYMEH-DLKWLMES---MKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQ 166 (332)
Q Consensus 91 ~~~lv~e~~~~-~l~~~~~~---~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~ 166 (332)
..++||||++| ++...+.. ....+++..++.++.+++.||++||+.|++|+||+|+||+++.++.++|+|||.+..
T Consensus 76 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~ 155 (267)
T cd08224 76 ELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFITATGVVKLGDLGLGRF 155 (267)
T ss_pred eEEEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEECCCCcEEEeccceeee
Confidence 88999999986 45444432 235589999999999999999999999999999999999999999999999999876
Q ss_pred cCCCCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCh--HHHHHHHHHHcCCCCCCcccC
Q 035861 167 YGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTE--VDQIDKIFKTLGTPTETIWPG 244 (332)
Q Consensus 167 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~--~~~~~~~~~~~~~~~~~~~~~ 244 (332)
............++..|.|||.+.+ ..++.++|+||||+++|++++|..||..... .+....+.....
T Consensus 156 ~~~~~~~~~~~~~~~~y~apE~~~~-~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~--------- 225 (267)
T cd08224 156 FSSKTTAAHSLVGTPYYMSPERIHE-NGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEKCDY--------- 225 (267)
T ss_pred ccCCCcccceecCCccccCHHHhcc-CCCCchhcHHHHHHHHHHHHHCCCCcccCCccHHHHHhhhhcCCC---------
Confidence 5443333344567888999999876 6689999999999999999999999965431 111111111000
Q ss_pred CCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhc
Q 035861 245 LSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALN 305 (332)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 305 (332)
...+.+.++..+.++|.+||..+|++||++.+|++
T Consensus 226 --------------------------~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~ 260 (267)
T cd08224 226 --------------------------PPLPADHYSEELRDLVSRCINPDPEKRPDISYVLQ 260 (267)
T ss_pred --------------------------CCCChhhcCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 00011236788999999999999999999999875
No 282
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=6.5e-41 Score=316.93 Aligned_cols=255 Identities=26% Similarity=0.343 Sum_probs=195.2
Q ss_pred hhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCC
Q 035861 10 VFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDH 89 (332)
Q Consensus 10 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 89 (332)
+++|++++.||+|+||.||+|.+..+++.||+|++......... ....+.+|+.++++++||||+++++.+.+ .
T Consensus 1 igrYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~-----~~~rflrEi~ILs~L~HPNIVkl~~v~~d-~ 74 (932)
T PRK13184 1 MQRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPL-----LKKRFLREAKIAADLIHPGIVPVYSICSD-G 74 (932)
T ss_pred CCCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHH-----HHHHHHHHHHHHHhCCCcCcCeEEEEEee-C
Confidence 46899999999999999999999999999999998754322111 11256789999999999999999999844 4
Q ss_pred CeEEEEcccccccHH-HHHHhc----------CCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEE
Q 035861 90 DSVYMVMEYMEHDLK-WLMESM----------KQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKI 158 (332)
Q Consensus 90 ~~~~lv~e~~~~~l~-~~~~~~----------~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l 158 (332)
...+++|||++|+.+ +.+... ...++...+..++.||+.||+|||+.||+||||||+||+++.++.++|
T Consensus 75 ~~lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILLd~dg~vKL 154 (932)
T PRK13184 75 DPVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILLGLFGEVVI 154 (932)
T ss_pred CEEEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEEcCCCCEEE
Confidence 789999999997544 433321 123566778899999999999999999999999999999999999999
Q ss_pred eecccccccCCC------------------CCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCC
Q 035861 159 CDFGMSRQYGSP------------------LKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSG 220 (332)
Q Consensus 159 ~df~~~~~~~~~------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~ 220 (332)
+|||.+...... ........||+.|+|||.+.+ ..++.++|+||||+++|+|+||..||..
T Consensus 155 iDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g-~~~S~kSDIWSLGVILyELLTG~~PF~~ 233 (932)
T PRK13184 155 LDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLG-VPASESTDIYALGVILYQMLTLSFPYRR 233 (932)
T ss_pred EecCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcC-CCCCcHhHHHHHHHHHHHHHHCCCCCCC
Confidence 999998765110 011123468999999999877 6789999999999999999999999976
Q ss_pred CChHHHHHHHHHHcCCCCCCcccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCH
Q 035861 221 TTEVDQIDKIFKTLGTPTETIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITV 300 (332)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~ 300 (332)
.......... ....+ ........+++.+.+++.+||+.||++|++.
T Consensus 234 ~~~~ki~~~~--~i~~P--------------------------------~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss 279 (932)
T PRK13184 234 KKGRKISYRD--VILSP--------------------------------IEVAPYREIPPFLSQIAMKALAVDPAERYSS 279 (932)
T ss_pred cchhhhhhhh--hccCh--------------------------------hhccccccCCHHHHHHHHHHccCChhhCcCH
Confidence 4432221110 00000 0001122478889999999999999999876
Q ss_pred HHHhc
Q 035861 301 DDALN 305 (332)
Q Consensus 301 ~ell~ 305 (332)
.+.+.
T Consensus 280 ~eeLl 284 (932)
T PRK13184 280 VQELK 284 (932)
T ss_pred HHHHH
Confidence 55553
No 283
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=100.00 E-value=6e-41 Score=289.34 Aligned_cols=268 Identities=24% Similarity=0.403 Sum_probs=203.4
Q ss_pred cccccccccccCcEEEEEEEEC---CCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhC-CCCCeeeeeeeEEc
Q 035861 12 EFEKLNKISEGTYGIVYRARDK---KSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSF-DHPSIVNVKEVVMD 87 (332)
Q Consensus 12 ~y~~~~~lg~g~~g~v~~~~~~---~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~ 87 (332)
+|++.+.||.|++|.||+++.. .+++.++||++......... .....+..|+.++.++ .|++|+++.+.+ .
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~----~~~~~~~~E~~~l~~~~~~~~i~~~~~~~-~ 75 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKA----KTAEHTRTERQVLEAVRRCPFLVTLHYAF-Q 75 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhh----hHHHHHHHHHHHHHhccCCcchhhhheee-e
Confidence 4889999999999999999864 36788999998754221111 1112456899999999 699999999888 4
Q ss_pred CCCeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeeccccccc
Q 035861 88 DHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQY 167 (332)
Q Consensus 88 ~~~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~ 167 (332)
.....++||||++|+.+.........+++..+..++.|++.+|++||+.|++|+||+|.||+++.++.++|+|||.+...
T Consensus 76 ~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~ 155 (288)
T cd05583 76 TDTKLHLILDYVNGGELFTHLYQREHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLDSEGHVVLTDFGLSKEF 155 (288)
T ss_pred cCCEEEEEEecCCCCcHHHHHhhcCCcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEEECcccccc
Confidence 44788999999987544444444567999999999999999999999999999999999999999999999999988764
Q ss_pred CCCCC-CCccccccccccchhhhcCCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCC
Q 035861 168 GSPLK-PYTSLVVTLWYRAPELLLGAK-KYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGL 245 (332)
Q Consensus 168 ~~~~~-~~~~~~~~~~y~aPE~~~~~~-~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (332)
..... ......++..|+|||.+.+.. ..+.++|+||||+++|+|++|..||...........+.....
T Consensus 156 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~---------- 225 (288)
T cd05583 156 LAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRIL---------- 225 (288)
T ss_pred ccccccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHHH----------
Confidence 32211 112345788999999986532 368899999999999999999999964332211111111100
Q ss_pred CCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCC---HHHHhcCCCCCCCCCCCC
Q 035861 246 SELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRIT---VDDALNHYWFHEVPLPKS 317 (332)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps---~~ell~hp~f~~~~~~~~ 317 (332)
......+..++..+.++|.+||+.||++||| +.++|+||||+.+.|+..
T Consensus 226 -----------------------~~~~~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~~~~~~~~~~~ 277 (288)
T cd05583 226 -----------------------KSKPPFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNHPFFQGIDWDDL 277 (288)
T ss_pred -----------------------ccCCCCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcCcccccCCHHHH
Confidence 0001112236788999999999999999998 678899999999988655
No 284
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=4.1e-42 Score=270.46 Aligned_cols=255 Identities=23% Similarity=0.400 Sum_probs=198.9
Q ss_pred hcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEc---
Q 035861 11 FEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMD--- 87 (332)
Q Consensus 11 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--- 87 (332)
++|.+.+.||.|||+-||+++...+++.||+|++......... ..++|++.-++++|||++++++....
T Consensus 21 ~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e--------~~~rEid~~rkf~s~~vl~l~dh~l~~~~ 92 (302)
T KOG2345|consen 21 KRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIE--------EALREIDNHRKFNSPNVLRLVDHQLREEK 92 (302)
T ss_pred ceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHH--------HHHHHHHHHHhhCCcchHHHHHHHHHhhc
Confidence 4899999999999999999999999999999999876532221 45799999999999999999887643
Q ss_pred -CCCeEEEEccccc-ccHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHCC--cccccCCCCCEEEcCCCcEEEee
Q 035861 88 -DHDSVYMVMEYME-HDLKWLMESM---KQPFSTSEVKCLMLQLLEGVKYLHDNW--VLHRDLKTSNLLLNNQGVLKICD 160 (332)
Q Consensus 88 -~~~~~~lv~e~~~-~~l~~~~~~~---~~~l~~~~~~~i~~~l~~~L~~lh~~~--i~H~di~p~Nili~~~~~~~l~d 160 (332)
.....||+++|.. |++.+.+... ...+++.+++.|+.+++.||.+||+.. ++|+||||.||++++++.+++.|
T Consensus 93 D~~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~~~~~vl~D 172 (302)
T KOG2345|consen 93 DGKHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSDSGLPVLMD 172 (302)
T ss_pred cCceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecCCCceEEEe
Confidence 3356899999986 6677777654 346999999999999999999999999 99999999999999999999999
Q ss_pred cccccccCCCCCCC---------ccccccccccchhhhcC--CCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Q 035861 161 FGMSRQYGSPLKPY---------TSLVVTLWYRAPELLLG--AKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDK 229 (332)
Q Consensus 161 f~~~~~~~~~~~~~---------~~~~~~~~y~aPE~~~~--~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~ 229 (332)
||+++...-..... .....|..|+|||.+.. ....+.++|||||||++|.|+.|..||..--.
T Consensus 173 ~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~------ 246 (302)
T KOG2345|consen 173 LGSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQ------ 246 (302)
T ss_pred ccCccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhh------
Confidence 99998653222111 12234778999999864 24578899999999999999999999953210
Q ss_pred HHHHcCCCCCCcccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcC
Q 035861 230 IFKTLGTPTETIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNH 306 (332)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 306 (332)
.+ . .. . +.-..+....+..+.+|+.+.+||+.||+.||.+||++.+++.+
T Consensus 247 --~G--g---Sl-----a---------------LAv~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~ 296 (302)
T KOG2345|consen 247 --QG--G---SL-----A---------------LAVQNAQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSK 296 (302)
T ss_pred --cC--C---eE-----E---------------EeeeccccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHH
Confidence 00 0 00 0 00000111222233389999999999999999999999999864
No 285
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=1.1e-40 Score=282.88 Aligned_cols=243 Identities=26% Similarity=0.338 Sum_probs=191.4
Q ss_pred cccccCcEEEEEEEE--CCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCCeEEEE
Q 035861 18 KISEGTYGIVYRARD--KKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHDSVYMV 95 (332)
Q Consensus 18 ~lg~g~~g~v~~~~~--~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~lv 95 (332)
.||+|+||.||+|.+ ..++..+|+|++........ ....+..|+.+++.+.|+||+++++.+ ++ ...++|
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~------~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~-~~~~lv 73 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPA------LKDELLREANVMQQLDNPYIVRMIGIC-EA-ESWMLV 73 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHH------HHHHHHHHHHHHHhCCCCCcceEEEEE-cC-CCcEEE
Confidence 689999999999965 45678999998864432211 112467899999999999999999987 43 457899
Q ss_pred cccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCCCCCC--
Q 035861 96 MEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKP-- 173 (332)
Q Consensus 96 ~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~~~~~-- 173 (332)
||+++++.+.........+++..+..++.|++.||++||++|++|+||||.||+++.++.++|+|||.+.........
T Consensus 74 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 153 (257)
T cd05116 74 MELAELGPLNKFLQKNKHVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYK 153 (257)
T ss_pred EecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEcCCCeEEECCCccccccCCCCCeee
Confidence 999997654444444678999999999999999999999999999999999999999999999999998765433221
Q ss_pred -CccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCCccc
Q 035861 174 -YTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA-KKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGA 251 (332)
Q Consensus 174 -~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (332)
.....++..|+|||.+.. ..++.++|+||||+++|++++ |..||...........+.....
T Consensus 154 ~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~i~~~~~---------------- 216 (257)
T cd05116 154 AKTHGKWPVKWYAPECMNY-YKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIESGER---------------- 216 (257)
T ss_pred ecCCCCCCccccCHhHhcc-CCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCCC----------------
Confidence 122233578999998865 568889999999999999998 9999987766555444432211
Q ss_pred cccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhc
Q 035861 252 KANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALN 305 (332)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 305 (332)
...+..+++++.+||.+||+.||++||++.+|..
T Consensus 217 --------------------~~~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~ 250 (257)
T cd05116 217 --------------------MECPQRCPPEMYDLMKLCWTYGVDERPGFAVVEL 250 (257)
T ss_pred --------------------CCCCCCCCHHHHHHHHHHhccCchhCcCHHHHHH
Confidence 1112237899999999999999999999998865
No 286
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=1.2e-40 Score=283.27 Aligned_cols=247 Identities=22% Similarity=0.385 Sum_probs=197.2
Q ss_pred hhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCC
Q 035861 10 VFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDH 89 (332)
Q Consensus 10 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 89 (332)
-++|+++++||+|++|.||+|... +++.+|+|.+....... ..+.+|+.++++++|+|++++++.+ ..
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~~-~~~~~a~K~~~~~~~~~---------~~~~~E~~~l~~l~h~~i~~~~~~~-~~- 72 (260)
T cd05067 5 RETLKLVKKLGAGQFGEVWMGYYN-GHTKVAIKSLKQGSMSP---------EAFLAEANLMKQLQHPRLVRLYAVV-TQ- 72 (260)
T ss_pred hHHceeeeeeccCccceEEeeecC-CCceEEEEEecCCCCcH---------HHHHHHHHHHHhcCCcCeeeEEEEE-cc-
Confidence 358999999999999999999865 57789999986443221 1467899999999999999999887 33
Q ss_pred CeEEEEcccccc-cHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeeccccccc
Q 035861 90 DSVYMVMEYMEH-DLKWLMESM-KQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQY 167 (332)
Q Consensus 90 ~~~~lv~e~~~~-~l~~~~~~~-~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~ 167 (332)
...++++|++.+ ++.+.+... ...+++..+..++.|++.||++||+.|++|+||+|+||+++.++.++|+|||.+...
T Consensus 73 ~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~ 152 (260)
T cd05067 73 EPIYIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILVSETLCCKIADFGLARLI 152 (260)
T ss_pred CCcEEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEEcCCCCEEEccCcceeec
Confidence 568999999975 555555432 346899999999999999999999999999999999999999999999999998765
Q ss_pred CCC-CCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCCCCCCcccCC
Q 035861 168 GSP-LKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA-KKPLFSGTTEVDQIDKIFKTLGTPTETIWPGL 245 (332)
Q Consensus 168 ~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (332)
... ........++..|+|||.+.. ..++.++|+||||+++|++++ |..||...+..+....+......
T Consensus 153 ~~~~~~~~~~~~~~~~y~~pe~~~~-~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~--------- 222 (260)
T cd05067 153 EDNEYTAREGAKFPIKWTAPEAINY-GTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNLERGYRM--------- 222 (260)
T ss_pred CCCCcccccCCcccccccCHHHhcc-CCcCcccchHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHcCCCC---------
Confidence 421 112223345678999999876 568899999999999999999 99999877766555444322111
Q ss_pred CCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhc
Q 035861 246 SELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALN 305 (332)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 305 (332)
..+..++.++.+++.+||+.+|++||+++++++
T Consensus 223 ---------------------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 255 (260)
T cd05067 223 ---------------------------PRPDNCPEELYELMRLCWKEKPEERPTFEYLRS 255 (260)
T ss_pred ---------------------------CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 111226788999999999999999999999875
No 287
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=1.2e-40 Score=286.11 Aligned_cols=251 Identities=22% Similarity=0.342 Sum_probs=196.9
Q ss_pred hhcccccccccccCcEEEEEEEECCCCc----EEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeE
Q 035861 10 VFEFEKLNKISEGTYGIVYRARDKKSGE----IVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVV 85 (332)
Q Consensus 10 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~----~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~ 85 (332)
..+|++++.||.|++|+||+|++..++. .||+|++........ ...+.+|+..++.+.|+||+.+++.+
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~-------~~~~~~e~~~l~~~~~~~i~~~~~~~ 78 (279)
T cd05109 6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKA-------NKEILDEAYVMAGVGSPYVCRLLGIC 78 (279)
T ss_pred hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHH-------HHHHHHHHHHHHhcCCCCCceEEEEE
Confidence 4589999999999999999999877666 478998864332111 12466899999999999999999988
Q ss_pred EcCCCeEEEEcccccc-cHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccc
Q 035861 86 MDDHDSVYMVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMS 164 (332)
Q Consensus 86 ~~~~~~~~lv~e~~~~-~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~ 164 (332)
.. ...+++++++++ ++.+.+....+.+++..+..++.|++.||+|||++|++|+||||+||+++.++.++|+|||++
T Consensus 79 ~~--~~~~l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~~~~~~~kL~dfG~~ 156 (279)
T cd05109 79 LT--STVQLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVKSPNHVKITDFGLA 156 (279)
T ss_pred cC--CCcEEEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCCCcEEECCCCce
Confidence 54 346789999985 566666555567999999999999999999999999999999999999999999999999998
Q ss_pred cccCCCCCC--CccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCCCCCCc
Q 035861 165 RQYGSPLKP--YTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA-KKPLFSGTTEVDQIDKIFKTLGTPTETI 241 (332)
Q Consensus 165 ~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 241 (332)
......... .....++..|+|||.+.+ ..++.++|+||||+++|++++ |..||...........+......
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~-~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~----- 230 (279)
T cd05109 157 RLLDIDETEYHADGGKVPIKWMALESILH-RRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEKGERL----- 230 (279)
T ss_pred eecccccceeecCCCccchhhCCHHHhcc-CCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCcC-----
Confidence 765432221 122234567999999876 568999999999999999998 89998776554443322221110
Q ss_pred ccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcC
Q 035861 242 WPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNH 306 (332)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 306 (332)
...+.++.++.+++.+||+.||++||++.+++..
T Consensus 231 -------------------------------~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~ 264 (279)
T cd05109 231 -------------------------------PQPPICTIDVYMIMVKCWMIDSECRPRFRELVDE 264 (279)
T ss_pred -------------------------------CCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 1112367889999999999999999999999853
No 288
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=100.00 E-value=5.8e-41 Score=285.13 Aligned_cols=256 Identities=28% Similarity=0.442 Sum_probs=199.8
Q ss_pred cccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCCe
Q 035861 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHDS 91 (332)
Q Consensus 12 ~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 91 (332)
+|.+.+.||+|++|+||++.+..++..+++|++......... ......+..|+.+++.++|||++++++.+.+. ..
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-~~ 76 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELN---PNETVQANQEAQLLSKLDHPAIVKFHASFLER-DA 76 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccC---cchHHHHHHHHHHHHhCCCCcHHHHHHHHhcC-Cc
Confidence 588999999999999999999877777777776542221110 00111345788999999999999999998444 67
Q ss_pred EEEEcccccccHHH-HHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeeccccccc
Q 035861 92 VYMVMEYMEHDLKW-LMES---MKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQY 167 (332)
Q Consensus 92 ~~lv~e~~~~~l~~-~~~~---~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~ 167 (332)
.++|+||++++.+. .+.. ....+++..++.++.|++.||.+||+.|++|+||+|+||+++. +.++|+|||.+...
T Consensus 77 ~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~~-~~~~l~d~g~~~~~ 155 (260)
T cd08222 77 FCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLKN-NLLKIGDFGVSRLL 155 (260)
T ss_pred eEEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEeec-CCEeecccCceeec
Confidence 89999999874443 3332 3467999999999999999999999999999999999999975 67999999988766
Q ss_pred CCCCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCC
Q 035861 168 GSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSE 247 (332)
Q Consensus 168 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (332)
...........++..|+|||.+.. ..++.++|+||+|+++|++++|..||...........+......
T Consensus 156 ~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~----------- 223 (260)
T cd08222 156 MGSCDLATTFTGTPYYMSPEALKH-QGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRIVEGPTP----------- 223 (260)
T ss_pred CCCcccccCCCCCcCccCHHHHcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHcCCCC-----------
Confidence 443333344567888999999865 56788999999999999999999999776655544443321100
Q ss_pred CccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCC
Q 035861 248 LPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWF 309 (332)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f 309 (332)
..+..++.++.++|.+||..+|++||++.++++||||
T Consensus 224 -------------------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~ 260 (260)
T cd08222 224 -------------------------SLPETYSRQLNSIMQSMLNKDPSLRPSAAEILRNPFI 260 (260)
T ss_pred -------------------------CCcchhcHHHHHHHHHHhcCChhhCcCHHHHhhCCCC
Confidence 0112368899999999999999999999999999997
No 289
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=1.1e-40 Score=286.19 Aligned_cols=252 Identities=22% Similarity=0.361 Sum_probs=194.1
Q ss_pred hhcccccccccccCcEEEEEEEECC-----CCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeee
Q 035861 10 VFEFEKLNKISEGTYGIVYRARDKK-----SGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEV 84 (332)
Q Consensus 10 ~~~y~~~~~lg~g~~g~v~~~~~~~-----~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~ 84 (332)
-++|++.+.||+|++|+||+|.+.. ++..+|+|++........ ...+.+|+.+++.++|+||+++++.
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~-------~~~~~~e~~~l~~l~~~~iv~~~~~ 77 (277)
T cd05062 5 REKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRE-------RIEFLNEASVMKEFNCHHVVRLLGV 77 (277)
T ss_pred HHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHH-------HHHHHHHHHHHHhCCCCCeeeEEEE
Confidence 4689999999999999999998652 356799998754221111 1145689999999999999999999
Q ss_pred EEcCCCeEEEEccccccc-HHHHHHhcC---------CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCC
Q 035861 85 VMDDHDSVYMVMEYMEHD-LKWLMESMK---------QPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQG 154 (332)
Q Consensus 85 ~~~~~~~~~lv~e~~~~~-l~~~~~~~~---------~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~ 154 (332)
+ ......++||||++++ +.+.+.... ..++...+..++.|++.||+|||+.|++|+||||+||+++.++
T Consensus 78 ~-~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~~~~ 156 (277)
T cd05062 78 V-SQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDF 156 (277)
T ss_pred E-cCCCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEEcCCC
Confidence 8 4447889999999865 444443321 2357788999999999999999999999999999999999999
Q ss_pred cEEEeecccccccCCCCC--CCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHH
Q 035861 155 VLKICDFGMSRQYGSPLK--PYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA-KKPLFSGTTEVDQIDKIF 231 (332)
Q Consensus 155 ~~~l~df~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~llt-g~~pf~~~~~~~~~~~~~ 231 (332)
.++|+|||.+........ ......++..|+|||.+.. ..++.++|+||||+++|+|++ |..||...+.......+.
T Consensus 157 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~~~~~~~ 235 (277)
T cd05062 157 TVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKD-GVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRFVM 235 (277)
T ss_pred CEEECCCCCccccCCcceeecCCCCccCHhhcChhHhhc-CCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH
Confidence 999999998875432111 1122345678999999876 678999999999999999999 788988776655444333
Q ss_pred HHcCCCCCCcccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcC
Q 035861 232 KTLGTPTETIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNH 306 (332)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 306 (332)
...... .+..++..+.+++.+||+.+|++||++.|++++
T Consensus 236 ~~~~~~------------------------------------~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 274 (277)
T cd05062 236 EGGLLD------------------------------------KPDNCPDMLFELMRMCWQYNPKMRPSFLEIISS 274 (277)
T ss_pred cCCcCC------------------------------------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 211100 112267789999999999999999999999864
No 290
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=7.6e-41 Score=290.61 Aligned_cols=252 Identities=25% Similarity=0.384 Sum_probs=193.2
Q ss_pred chhcccccccccccCcEEEEEEEECCCCcEE--EEEEeecccCCcccccccCCCcchhHHHHHHhhC-CCCCeeeeeeeE
Q 035861 9 SVFEFEKLNKISEGTYGIVYRARDKKSGEIV--ALKKVKMNVGRKEDCLEYGFPISSLREINILLSF-DHPSIVNVKEVV 85 (332)
Q Consensus 9 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v--~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~ 85 (332)
.+++|++.+.||+|+||.||+|.+..++..+ ++|.+..... ... ...+.+|+..+.++ +|+||+++++.+
T Consensus 5 ~~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~--~~~-----~~~~~~Ei~~l~~l~~h~~iv~~~~~~ 77 (303)
T cd05088 5 EWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYAS--KDD-----HRDFAGELEVLCKLGHHPNIINLLGAC 77 (303)
T ss_pred chhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCC--HHH-----HHHHHHHHHHHHHhcCCCCcceEEEEE
Confidence 4679999999999999999999987777654 5655542211 110 12456799999999 899999999998
Q ss_pred EcCCCeEEEEcccccc-cHHHHHHhcC---------------CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEE
Q 035861 86 MDDHDSVYMVMEYMEH-DLKWLMESMK---------------QPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLL 149 (332)
Q Consensus 86 ~~~~~~~~lv~e~~~~-~l~~~~~~~~---------------~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nil 149 (332)
......++|+||+++ ++.+.+.... ..+++..++.++.|++.||+|||++|++|+||||+||+
T Consensus 78 -~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nil 156 (303)
T cd05088 78 -EHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNIL 156 (303)
T ss_pred -CCCCCceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEE
Confidence 444789999999986 5555544321 25789999999999999999999999999999999999
Q ss_pred EcCCCcEEEeecccccccCCCCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHH
Q 035861 150 LNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA-KKPLFSGTTEVDQID 228 (332)
Q Consensus 150 i~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~llt-g~~pf~~~~~~~~~~ 228 (332)
++.++.++|+|||++...... .......++..|+|||.+.. ..++.++|+||||+++|+++| |..||...+..+...
T Consensus 157 i~~~~~~kl~dfg~~~~~~~~-~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~ 234 (303)
T cd05088 157 VGENYVAKIADFGLSRGQEVY-VKKTMGRLPVRWMAIESLNY-SVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYE 234 (303)
T ss_pred ecCCCcEEeCccccCcccchh-hhcccCCCcccccCHHHHhc-cCCcccccchhhhhHHHHHHhcCCCCcccCChHHHHH
Confidence 999999999999988643211 11112233567999998866 568899999999999999998 999997766554433
Q ss_pred HHHHHcCCCCCCcccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcC
Q 035861 229 KIFKTLGTPTETIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNH 306 (332)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 306 (332)
.+.... ....+..+++.+.+|+.+||+.+|++||++++++.+
T Consensus 235 ~~~~~~------------------------------------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 276 (303)
T cd05088 235 KLPQGY------------------------------------RLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS 276 (303)
T ss_pred HHhcCC------------------------------------cCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 321100 000112267889999999999999999999999986
No 291
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=2.6e-40 Score=281.14 Aligned_cols=248 Identities=23% Similarity=0.371 Sum_probs=196.4
Q ss_pred chhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcC
Q 035861 9 SVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDD 88 (332)
Q Consensus 9 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 88 (332)
..++|++++.||+|++|.||+|.+. ++..+++|.+....... ..+.+|+.++++++|++++++++.+ ..
T Consensus 4 ~~~~~~~~~~ig~g~~~~v~~~~~~-~~~~~~~k~~~~~~~~~---------~~~~~E~~~l~~l~~~~i~~~~~~~-~~ 72 (260)
T cd05070 4 PRESLQLIKKLGNGQFGEVWMGTWN-GNTKVAVKTLKPGTMSP---------ESFLEEAQIMKKLRHDKLVQLYAVV-SE 72 (260)
T ss_pred chHHhhhhheeccccCceEEEEEec-CCceeEEEEecCCCCCH---------HHHHHHHHHHHhcCCCceEEEEeEE-CC
Confidence 3568999999999999999999876 45669999987543221 1467899999999999999999987 33
Q ss_pred CCeEEEEcccccc-cHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccc
Q 035861 89 HDSVYMVMEYMEH-DLKWLMESM-KQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQ 166 (332)
Q Consensus 89 ~~~~~lv~e~~~~-~l~~~~~~~-~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~ 166 (332)
...+++|||+++ ++.+.+... ...+++..+..++.|++.||+|||++|++|+||+|+||+++.++.++|+|||.+..
T Consensus 73 -~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili~~~~~~~l~dfg~~~~ 151 (260)
T cd05070 73 -EPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGDGLVCKIADFGLARL 151 (260)
T ss_pred -CCcEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEeCCceEEeCCceeeee
Confidence 457899999986 455554432 34589999999999999999999999999999999999999999999999999876
Q ss_pred cCCCCC-CCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCCCCCCcccC
Q 035861 167 YGSPLK-PYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA-KKPLFSGTTEVDQIDKIFKTLGTPTETIWPG 244 (332)
Q Consensus 167 ~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (332)
...... ......++..|+|||.+.. ..++.++|+||||+++|++++ |..||...+..+....+.....
T Consensus 152 ~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~--------- 221 (260)
T cd05070 152 IEDNEYTARQGAKFPIKWTAPEAALY-GRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYR--------- 221 (260)
T ss_pred ccCcccccccCCCCCccccChHHHhc-CCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCC---------
Confidence 533221 1122234567999998876 678999999999999999999 8999987766555554432111
Q ss_pred CCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhc
Q 035861 245 LSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALN 305 (332)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 305 (332)
...+...+..+.+|+.+||..+|++|||+.++++
T Consensus 222 ---------------------------~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~ 255 (260)
T cd05070 222 ---------------------------MPCPQDCPISLHELMLQCWKKDPEERPTFEYLQS 255 (260)
T ss_pred ---------------------------CCCCCcCCHHHHHHHHHHcccCcccCcCHHHHHH
Confidence 0112236788999999999999999999999874
No 292
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=1.3e-40 Score=286.54 Aligned_cols=253 Identities=22% Similarity=0.388 Sum_probs=197.2
Q ss_pred chhcccccccccccCcEEEEEEEEC----CCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeee
Q 035861 9 SVFEFEKLNKISEGTYGIVYRARDK----KSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEV 84 (332)
Q Consensus 9 ~~~~y~~~~~lg~g~~g~v~~~~~~----~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~ 84 (332)
.+++|++.+.||+|+||+||+|... .++..+++|.+........ ...+.+|+.+++++.||||+++++.
T Consensus 3 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~-------~~~~~~E~~~l~~l~h~niv~~~~~ 75 (283)
T cd05090 3 PLSAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQ-------WGEFQQEASLMAELHHPNIVCLLGV 75 (283)
T ss_pred ChhhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHH-------HHHHHHHHHHHhhCCCCCeeeEEEE
Confidence 4578999999999999999999853 3567899999864322111 1145689999999999999999999
Q ss_pred EEcCCCeEEEEcccccc-cHHHHHHhc----------------CCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCC
Q 035861 85 VMDDHDSVYMVMEYMEH-DLKWLMESM----------------KQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSN 147 (332)
Q Consensus 85 ~~~~~~~~~lv~e~~~~-~l~~~~~~~----------------~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~N 147 (332)
+... ...|++|||+++ ++.+.+... ...+++..+..++.|++.||+|||++|++|+||+|+|
T Consensus 76 ~~~~-~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~n 154 (283)
T cd05090 76 VTQE-QPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARN 154 (283)
T ss_pred EecC-CceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhccccce
Confidence 8554 778999999986 454444321 1247889999999999999999999999999999999
Q ss_pred EEEcCCCcEEEeecccccccCCCC--CCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChH
Q 035861 148 LLLNNQGVLKICDFGMSRQYGSPL--KPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA-KKPLFSGTTEV 224 (332)
Q Consensus 148 ili~~~~~~~l~df~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~llt-g~~pf~~~~~~ 224 (332)
|+++.++.++|+|||++....... .......++..|+|||.+.+ ..++.++|+||||+++|+|++ |..||......
T Consensus 155 ili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~ 233 (283)
T cd05090 155 ILIGEQLHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMY-GKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQ 233 (283)
T ss_pred EEEcCCCcEEeccccccccccCCcceecccCCCccceecChHHhcc-CCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHH
Confidence 999999999999999987653221 11223345667999999876 568999999999999999998 99999776654
Q ss_pred HHHHHHHHHcCCCCCCcccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHh
Q 035861 225 DQIDKIFKTLGTPTETIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDAL 304 (332)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell 304 (332)
.....+..... ...+..+++.+.+++.+||+.||++||++.+|+
T Consensus 234 ~~~~~~~~~~~------------------------------------~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~ 277 (283)
T cd05090 234 EVIEMVRKRQL------------------------------------LPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIH 277 (283)
T ss_pred HHHHHHHcCCc------------------------------------CCCCCCCCHHHHHHHHHHcccCcccCcCHHHHH
Confidence 44443322110 111223688999999999999999999999998
Q ss_pred cC
Q 035861 305 NH 306 (332)
Q Consensus 305 ~h 306 (332)
++
T Consensus 278 ~~ 279 (283)
T cd05090 278 TR 279 (283)
T ss_pred HH
Confidence 65
No 293
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=2.3e-40 Score=284.33 Aligned_cols=251 Identities=21% Similarity=0.306 Sum_probs=193.5
Q ss_pred hhcccccccccccCcEEEEEEEECCCCcE----EEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeE
Q 035861 10 VFEFEKLNKISEGTYGIVYRARDKKSGEI----VALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVV 85 (332)
Q Consensus 10 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~----v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~ 85 (332)
..+|++++.||.|+||+||+|.+..++.. +++|++....... ....+..|+..++++.||||+++++++
T Consensus 6 ~~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~-------~~~~~~~~~~~l~~l~h~~iv~~~~~~ 78 (279)
T cd05111 6 ETELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQ-------TFQEITDHMLAMGSLDHAYIVRLLGIC 78 (279)
T ss_pred HhhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchH-------HHHHHHHHHHHHhcCCCCCcceEEEEE
Confidence 46899999999999999999999777764 6666654221110 112355677788999999999999987
Q ss_pred EcCCCeEEEEccccc-ccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccc
Q 035861 86 MDDHDSVYMVMEYME-HDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMS 164 (332)
Q Consensus 86 ~~~~~~~~lv~e~~~-~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~ 164 (332)
.+ ...++++|+++ |++.+.+....+.+++..+..++.||+.||+|||++|++|+||||+||+++.++.++|+|||.+
T Consensus 79 -~~-~~~~~i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~kl~Dfg~~ 156 (279)
T cd05111 79 -PG-ASLQLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLKSDSIVQIADFGVA 156 (279)
T ss_pred -CC-CccEEEEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEEcCCccc
Confidence 33 44678899988 4666666665678999999999999999999999999999999999999999999999999998
Q ss_pred cccCCCCC--CCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCCCCCCc
Q 035861 165 RQYGSPLK--PYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA-KKPLFSGTTEVDQIDKIFKTLGTPTETI 241 (332)
Q Consensus 165 ~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 241 (332)
........ ......++..|+|||.+.. ..++.++|+||||+++|++++ |..||...........+..... +
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~y~~pE~~~~-~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~-~---- 230 (279)
T cd05111 157 DLLYPDDKKYFYSEHKTPIKWMALESILF-GRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVPDLLEKGER-L---- 230 (279)
T ss_pred eeccCCCcccccCCCCCcccccCHHHhcc-CCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCc-C----
Confidence 76532211 2233456678999999876 668999999999999999998 9999977654433222211110 0
Q ss_pred ccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcC
Q 035861 242 WPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNH 306 (332)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 306 (332)
..+..++..+.+++.+||..||++||++.|+++.
T Consensus 231 -------------------------------~~~~~~~~~~~~li~~c~~~~p~~Rps~~el~~~ 264 (279)
T cd05111 231 -------------------------------AQPQICTIDVYMVMVKCWMIDENVRPTFKELANE 264 (279)
T ss_pred -------------------------------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 0111256778899999999999999999999763
No 294
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=1.4e-40 Score=285.46 Aligned_cols=252 Identities=22% Similarity=0.361 Sum_probs=196.3
Q ss_pred hhcccccccccccCcEEEEEEEECC-----CCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeee
Q 035861 10 VFEFEKLNKISEGTYGIVYRARDKK-----SGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEV 84 (332)
Q Consensus 10 ~~~y~~~~~lg~g~~g~v~~~~~~~-----~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~ 84 (332)
.++|++.+.||+|++|.||+|.+.. ++..|++|.+........ ...+..|+..++.++|+||+++++.
T Consensus 5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~-------~~~~~~e~~~l~~l~~~~i~~~~~~ 77 (277)
T cd05036 5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQD-------ESDFLMEALIMSKFNHQNIVRLIGV 77 (277)
T ss_pred HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHH-------HHHHHHHHHHHHhCCCCCEeeEEEE
Confidence 3679999999999999999999976 678899998764322111 1146789999999999999999998
Q ss_pred EEcCCCeEEEEcccccc-cHHHHHHhcC------CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCC---
Q 035861 85 VMDDHDSVYMVMEYMEH-DLKWLMESMK------QPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQG--- 154 (332)
Q Consensus 85 ~~~~~~~~~lv~e~~~~-~l~~~~~~~~------~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~--- 154 (332)
+.+. ...++||||++| ++.+.+.... ..+++..+..++.||+.||+|||++|++|+||+|+||+++.++
T Consensus 78 ~~~~-~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~~~~ 156 (277)
T cd05036 78 SFER-LPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKGPGR 156 (277)
T ss_pred EccC-CCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEEeccCCCc
Confidence 8554 678899999976 4555544322 2589999999999999999999999999999999999998765
Q ss_pred cEEEeecccccccCCCCC--CCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHH
Q 035861 155 VLKICDFGMSRQYGSPLK--PYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA-KKPLFSGTTEVDQIDKIF 231 (332)
Q Consensus 155 ~~~l~df~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~llt-g~~pf~~~~~~~~~~~~~ 231 (332)
.++|+|||.+........ .......+..|+|||++.+ ..++.++|+||||+++|+|++ |..||...+.......+.
T Consensus 157 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~~~~~~ 235 (277)
T cd05036 157 VAKIADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLD-GIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVMEFVT 235 (277)
T ss_pred ceEeccCccccccCCccceecCCCCCccHhhCCHHHHhc-CCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH
Confidence 699999999876532111 1112233567999999976 668999999999999999997 999998776655443332
Q ss_pred HHcCCCCCCcccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcC
Q 035861 232 KTLGTPTETIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNH 306 (332)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 306 (332)
.... ...+..++..+.+++.+||+.+|++||++.+|++|
T Consensus 236 ~~~~------------------------------------~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~ 274 (277)
T cd05036 236 GGGR------------------------------------LDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILER 274 (277)
T ss_pred cCCc------------------------------------CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 2100 01122368889999999999999999999999986
No 295
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=2.5e-40 Score=281.45 Aligned_cols=248 Identities=22% Similarity=0.381 Sum_probs=196.8
Q ss_pred hhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCC
Q 035861 10 VFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDH 89 (332)
Q Consensus 10 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 89 (332)
..+|++.+.||+|++|.||+|.+.. ++.||+|.+...... ...+.+|+..+++++|+|++++++++.. .
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~-~~~v~iK~~~~~~~~---------~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~ 73 (261)
T cd05068 5 RTSIQLLRKLGAGQFGEVWEGLWNN-TTPVAVKTLKPGTMD---------PKDFLAEAQIMKKLRHPKLIQLYAVCTL-E 73 (261)
T ss_pred hhheeeEEEecccCCccEEEEEecC-CeEEEEEeeCCCccc---------HHHHHHHHHHHHHCCCCCccceeEEEec-C
Confidence 3579999999999999999999754 567999998653321 1246789999999999999999998844 4
Q ss_pred CeEEEEcccccc-cHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeeccccccc
Q 035861 90 DSVYMVMEYMEH-DLKWLMESMK-QPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQY 167 (332)
Q Consensus 90 ~~~~lv~e~~~~-~l~~~~~~~~-~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~ 167 (332)
...+++||+++| ++.+.+.... ..+++..+..++.|++.||.+||+.|++|+||+|+||+++.++.++|+|||.+...
T Consensus 74 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~ 153 (261)
T cd05068 74 EPIYIVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVGENNICKVADFGLARVI 153 (261)
T ss_pred CCeeeeeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEEcCCCCEEECCcceEEEc
Confidence 778999999965 5555554433 46899999999999999999999999999999999999999999999999998766
Q ss_pred CCCCCC-CccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCCCCCCcccCC
Q 035861 168 GSPLKP-YTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA-KKPLFSGTTEVDQIDKIFKTLGTPTETIWPGL 245 (332)
Q Consensus 168 ~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (332)
...... ......+..|+|||.+.. ..++.++|+||||+++|++++ |..||...+.......+......
T Consensus 154 ~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~--------- 223 (261)
T cd05068 154 KEDIYEAREGAKFPIKWTAPEAALY-NRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQVDQGYRM--------- 223 (261)
T ss_pred cCCcccccCCCcCceeccCcccccc-CCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCC---------
Confidence 422111 111223457999998876 678999999999999999999 99999877666555544322110
Q ss_pred CCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhc
Q 035861 246 SELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALN 305 (332)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 305 (332)
.....++..+.+++.+||+.+|.+||++.++++
T Consensus 224 ---------------------------~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~ 256 (261)
T cd05068 224 ---------------------------PCPPGCPKELYDIMLDCWKEDPDDRPTFETLQW 256 (261)
T ss_pred ---------------------------CCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHH
Confidence 111236788999999999999999999999875
No 296
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=100.00 E-value=1.8e-40 Score=314.60 Aligned_cols=151 Identities=29% Similarity=0.423 Sum_probs=128.3
Q ss_pred chhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcC
Q 035861 9 SVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDD 88 (332)
Q Consensus 9 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 88 (332)
.+++|++++.||.|+||+||+|.+..+++.||||++.......... ...+..|+.+++.++|+||+++++.+. .
T Consensus 2 ~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~-----~~~~~~E~~~l~~l~hp~Iv~~~~~~~-~ 75 (669)
T cd05610 2 SIEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNM-----VHQVQAERDALALSKSPFIVHLYYSLQ-S 75 (669)
T ss_pred ccCCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHH-----HHHHHHHHHHHHhcCCCCcCeEEEEEE-E
Confidence 4679999999999999999999999999999999997543222111 124568999999999999999998884 4
Q ss_pred CCeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeeccccc
Q 035861 89 HDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSR 165 (332)
Q Consensus 89 ~~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~ 165 (332)
....|+||||+.|+.+..+....+.+++..++.++.||+.||.|||++||+|+||||+|||++.++.++|+|||++.
T Consensus 76 ~~~~~lVmEy~~g~~L~~li~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFGls~ 152 (669)
T cd05610 76 ANNVYLVMEYLIGGDVKSLLHIYGYFDEEMAVKYISEVALALDYLHRHGIIHRDLKPDNMLISNEGHIKLTDFGLSK 152 (669)
T ss_pred CCEEEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence 47899999999865444444446779999999999999999999999999999999999999999999999999864
No 297
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=2.8e-40 Score=281.25 Aligned_cols=247 Identities=23% Similarity=0.371 Sum_probs=195.5
Q ss_pred hhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCC
Q 035861 10 VFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDH 89 (332)
Q Consensus 10 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 89 (332)
..+|++.++||+|++|+||+|++..+ ..|++|.+....... ..+.+|+..+++++|+||+++++.+ ..
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~-~~valK~~~~~~~~~---------~~~~~E~~~l~~l~~~~i~~~~~~~-~~- 72 (262)
T cd05071 5 RESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSP---------EAFLQEAQVMKKLRHEKLVQLYAVV-SE- 72 (262)
T ss_pred hHHeeEeeecCCCCCCcEEEEEecCC-ceEEEEecccCccCH---------HHHHHHHHHHHhCCCCCcceEEEEE-CC-
Confidence 35799999999999999999998755 459999987533211 1456899999999999999999887 33
Q ss_pred CeEEEEcccccc-cHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeeccccccc
Q 035861 90 DSVYMVMEYMEH-DLKWLMESM-KQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQY 167 (332)
Q Consensus 90 ~~~~lv~e~~~~-~l~~~~~~~-~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~ 167 (332)
...++||||+++ ++.+.+... ...+++..+..++.|++.||++||+.|++|+||+|.||+++.++.++|+|||.+...
T Consensus 73 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~ 152 (262)
T cd05071 73 EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLI 152 (262)
T ss_pred CCcEEEEEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEEcCCCcEEeccCCceeec
Confidence 457899999986 555555442 345899999999999999999999999999999999999999999999999998765
Q ss_pred CCCCC-CCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCCCCCCcccCC
Q 035861 168 GSPLK-PYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA-KKPLFSGTTEVDQIDKIFKTLGTPTETIWPGL 245 (332)
Q Consensus 168 ~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (332)
..... ......++..|+|||.... ..++.++|+||||+++|++++ |..||...........+.....
T Consensus 153 ~~~~~~~~~~~~~~~~y~~PE~~~~-~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~---------- 221 (262)
T cd05071 153 EDNEYTARQGAKFPIKWTAPEAALY-GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYR---------- 221 (262)
T ss_pred cccccccccCCcccceecCHhHhcc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHhcCCC----------
Confidence 43221 1123345677999998876 668999999999999999999 8889987766555444322110
Q ss_pred CCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhc
Q 035861 246 SELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALN 305 (332)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 305 (332)
......++..+.+|+.+|++.+|++||++.++++
T Consensus 222 --------------------------~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~ 255 (262)
T cd05071 222 --------------------------MPCPPECPESLHDLMCQCWRKEPEERPTFEYLQA 255 (262)
T ss_pred --------------------------CCCccccCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence 0111236888999999999999999999999875
No 298
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=2.8e-40 Score=280.86 Aligned_cols=245 Identities=26% Similarity=0.456 Sum_probs=199.5
Q ss_pred ccccccCcEEEEEEEECCC---CcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCCeEE
Q 035861 17 NKISEGTYGIVYRARDKKS---GEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHDSVY 93 (332)
Q Consensus 17 ~~lg~g~~g~v~~~~~~~~---~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 93 (332)
+.||+|+||.||++.+... +..+++|.+....... ....+.+|+..++.++|+|++++++++.. ....+
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~-------~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~~ 72 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEE-------ERKDFLKEARVMKKLGHPNVVRLLGVCTE-EEPLY 72 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchh-------HHHHHHHHHHHHhhcCCCChheeeeeecC-CCceE
Confidence 4699999999999999866 8899999987654322 11256789999999999999999999855 58899
Q ss_pred EEcccccc-cHHHHHHhc--------CCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccc
Q 035861 94 MVMEYMEH-DLKWLMESM--------KQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMS 164 (332)
Q Consensus 94 lv~e~~~~-~l~~~~~~~--------~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~ 164 (332)
++|||+++ ++.+.+... ...+++..++.++.|++.||++||++|++|+||+|+||+++.++.++|+|||.+
T Consensus 73 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili~~~~~~~l~dfg~~ 152 (262)
T cd00192 73 LVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVGEDLVVKISDFGLS 152 (262)
T ss_pred EEEEeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEECCCCcEEEcccccc
Confidence 99999965 555555543 377999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCC--CCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCCCCCCc
Q 035861 165 RQYGSPL--KPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA-KKPLFSGTTEVDQIDKIFKTLGTPTETI 241 (332)
Q Consensus 165 ~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 241 (332)
....... .......++..|+|||.+.. ..++.++|+||||+++|++++ |..||...........+....
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~------- 224 (262)
T cd00192 153 RDVYDDDYYRKKTGGKLPIRWMAPESLKD-GIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRKGY------- 224 (262)
T ss_pred cccccccccccccCCCcCccccCHHHhcc-CCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCC-------
Confidence 8764322 22334456788999999887 478999999999999999999 699998876655555443311
Q ss_pred ccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcC
Q 035861 242 WPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNH 306 (332)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 306 (332)
....+..++.++.+++.+||+.+|++||++++++++
T Consensus 225 -----------------------------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~ 260 (262)
T cd00192 225 -----------------------------RLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVER 260 (262)
T ss_pred -----------------------------CCCCCccCChHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 111122368899999999999999999999999875
No 299
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.6e-41 Score=297.58 Aligned_cols=246 Identities=30% Similarity=0.491 Sum_probs=203.6
Q ss_pred chhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhC-CCCCeeeeeeeEEc
Q 035861 9 SVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSF-DHPSIVNVKEVVMD 87 (332)
Q Consensus 9 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~ 87 (332)
...+|.+...+|.|+|+.|-.+.+..++...++|++....... .+|+.++... .|+|++++.+++ .
T Consensus 320 ~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~~~~------------~~e~~~~~~~~~h~niv~~~~v~-~ 386 (612)
T KOG0603|consen 320 FTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRADDN------------QDEIPISLLVRDHPNIVKSHDVY-E 386 (612)
T ss_pred cchhhccccccCCCCccceeeeeccccccchhheecccccccc------------ccccchhhhhcCCCcceeeccee-c
Confidence 4668999999999999999999999999999999998763222 2566565555 899999999999 5
Q ss_pred CCCeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEE-cCCCcEEEeecccccc
Q 035861 88 DHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLL-NNQGVLKICDFGMSRQ 166 (332)
Q Consensus 88 ~~~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili-~~~~~~~l~df~~~~~ 166 (332)
+....|+|||.+.|+.+-..+.+.+.+. ..+..|+.+|+.|+.|||++|++||||||+|||+ +..|+++|+|||.+..
T Consensus 387 ~~~~~~~v~e~l~g~ell~ri~~~~~~~-~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~ 465 (612)
T KOG0603|consen 387 DGKEIYLVMELLDGGELLRRIRSKPEFC-SEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLDGSAGHLRLTYFGFWSE 465 (612)
T ss_pred CCceeeeeehhccccHHHHHHHhcchhH-HHHHHHHHHHHHHHHHHHhcCeeecCCChhheeecCCCCcEEEEEechhhh
Confidence 6689999999999876555555455445 8888899999999999999999999999999999 5889999999999987
Q ss_pred cCCCCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCC
Q 035861 167 YGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLS 246 (332)
Q Consensus 167 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (332)
.... ....+-|..|.|||++.. ..++.++|+||||++||+|++|..||...... ..+......+...
T Consensus 466 ~~~~---~~tp~~t~~y~APEvl~~-~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~---~ei~~~i~~~~~s------ 532 (612)
T KOG0603|consen 466 LERS---CDTPALTLQYVAPEVLAI-QEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG---IEIHTRIQMPKFS------ 532 (612)
T ss_pred Cchh---hcccchhhcccChhhhcc-CCCCcchhhHHHHHHHHHHHhCCCccccCCch---HHHHHhhcCCccc------
Confidence 6433 445567888999999985 88999999999999999999999999887665 2222222111111
Q ss_pred CCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCC
Q 035861 247 ELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFH 310 (332)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~ 310 (332)
..+|.++++||++||+.||.+|+++.+++.||||.
T Consensus 533 -----------------------------~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h~w~~ 567 (612)
T KOG0603|consen 533 -----------------------------ECVSDEAKDLLQQLLQVDPALRLGADEIGAHPWFL 567 (612)
T ss_pred -----------------------------cccCHHHHHHHHHhccCChhhCcChhhhccCcchh
Confidence 23899999999999999999999999999999993
No 300
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=2e-40 Score=286.50 Aligned_cols=251 Identities=25% Similarity=0.377 Sum_probs=195.8
Q ss_pred hhcccccccccccCcEEEEEEEECC-----CCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeee
Q 035861 10 VFEFEKLNKISEGTYGIVYRARDKK-----SGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEV 84 (332)
Q Consensus 10 ~~~y~~~~~lg~g~~g~v~~~~~~~-----~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~ 84 (332)
..+|.+.+.||+|++|.||+|++.. ++..+++|.+........ ..+.+|+..+++++|+||+++++.
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~--------~~~~~e~~~l~~l~h~~i~~~~~~ 75 (291)
T cd05094 4 RRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAAR--------KDFQREAELLTNLQHEHIVKFYGV 75 (291)
T ss_pred hHHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHH--------HHHHHHHHHHhcCCCCCcceEEEE
Confidence 4579999999999999999998642 455688888754332111 145689999999999999999999
Q ss_pred EEcCCCeEEEEccccccc-HHHHHHhc---------------CCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCE
Q 035861 85 VMDDHDSVYMVMEYMEHD-LKWLMESM---------------KQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNL 148 (332)
Q Consensus 85 ~~~~~~~~~lv~e~~~~~-l~~~~~~~---------------~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Ni 148 (332)
+.. ....++||||++++ +.+.+... .+.+++..++.++.||+.||++||++|++|+||+|+||
T Consensus 76 ~~~-~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Ni 154 (291)
T cd05094 76 CGD-GDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNC 154 (291)
T ss_pred Ecc-CCceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceE
Confidence 854 47789999999864 44444331 13489999999999999999999999999999999999
Q ss_pred EEcCCCcEEEeecccccccCCCCC--CCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHH
Q 035861 149 LLNNQGVLKICDFGMSRQYGSPLK--PYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA-KKPLFSGTTEVD 225 (332)
Q Consensus 149 li~~~~~~~l~df~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~llt-g~~pf~~~~~~~ 225 (332)
+++.++.++|+|||.+........ ......++..|+|||.+.+ ..++.++|+||||+++|+|++ |..||...+..+
T Consensus 155 l~~~~~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~ 233 (291)
T cd05094 155 LVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMY-RKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTE 233 (291)
T ss_pred EEccCCcEEECCCCcccccCCCceeecCCCCCcceeecChHHhcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH
Confidence 999999999999999875433211 1223345778999999876 678999999999999999998 999998776655
Q ss_pred HHHHHHHHcCCCCCCcccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhc
Q 035861 226 QIDKIFKTLGTPTETIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALN 305 (332)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 305 (332)
....+...... .....++..+.+++.+||+.+|++||++.++++
T Consensus 234 ~~~~~~~~~~~------------------------------------~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~ 277 (291)
T cd05094 234 VIECITQGRVL------------------------------------ERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYK 277 (291)
T ss_pred HHHHHhCCCCC------------------------------------CCCccCCHHHHHHHHHHcccChhhCcCHHHHHH
Confidence 44433221100 011226788999999999999999999999976
Q ss_pred C
Q 035861 306 H 306 (332)
Q Consensus 306 h 306 (332)
.
T Consensus 278 ~ 278 (291)
T cd05094 278 I 278 (291)
T ss_pred H
Confidence 3
No 301
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=1.9e-40 Score=285.48 Aligned_cols=253 Identities=21% Similarity=0.318 Sum_probs=197.5
Q ss_pred chhcccccccccccCcEEEEEEEECC-----CCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeee
Q 035861 9 SVFEFEKLNKISEGTYGIVYRARDKK-----SGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKE 83 (332)
Q Consensus 9 ~~~~y~~~~~lg~g~~g~v~~~~~~~-----~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~ 83 (332)
.+.+|++.+.||.|+||.||+|.+.. ++..||+|++....... ....+..|+.++..++||||+++++
T Consensus 3 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~-------~~~~~~~e~~~~~~l~h~~iv~~~~ 75 (283)
T cd05091 3 NLSTVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGP-------LREEFKHEAMMRSRLQHPNIVCLLG 75 (283)
T ss_pred CHHHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHH-------HHHHHHHHHHHHhcCCCCCcCeEEE
Confidence 35689999999999999999998754 35789999987443211 1124568999999999999999999
Q ss_pred eEEcCCCeEEEEcccccccHH-HHHHhc---------------CCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCC
Q 035861 84 VVMDDHDSVYMVMEYMEHDLK-WLMESM---------------KQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSN 147 (332)
Q Consensus 84 ~~~~~~~~~~lv~e~~~~~l~-~~~~~~---------------~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~N 147 (332)
.+... ...++++||+.++.+ +.+... ...+++..+..++.|++.||+|||++|++|+||||+|
T Consensus 76 ~~~~~-~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~N 154 (283)
T cd05091 76 VVTKE-QPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRN 154 (283)
T ss_pred EEcCC-CceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchhh
Confidence 98444 678999999986543 333211 2357888999999999999999999999999999999
Q ss_pred EEEcCCCcEEEeecccccccCCCCC--CCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChH
Q 035861 148 LLLNNQGVLKICDFGMSRQYGSPLK--PYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA-KKPLFSGTTEV 224 (332)
Q Consensus 148 ili~~~~~~~l~df~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~llt-g~~pf~~~~~~ 224 (332)
|+++.++.++|+|||.+........ ......+++.|+|||.+.. ..++.++|+||||+++|+|++ |..||......
T Consensus 155 il~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~ 233 (283)
T cd05091 155 VLVFDKLNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMY-GKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQ 233 (283)
T ss_pred eEecCCCceEecccccccccccchheeeccCccCCccccCHHHHhc-CCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHH
Confidence 9999999999999998875432211 1123345678999999876 568999999999999999998 88888877666
Q ss_pred HHHHHHHHHcCCCCCCcccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHh
Q 035861 225 DQIDKIFKTLGTPTETIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDAL 304 (332)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell 304 (332)
+....+......+ ....++..+.+|+.+||+.+|++||++.+|+
T Consensus 234 ~~~~~i~~~~~~~------------------------------------~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~ 277 (283)
T cd05091 234 DVIEMIRNRQVLP------------------------------------CPDDCPAWVYTLMLECWNEFPSRRPRFKDIH 277 (283)
T ss_pred HHHHHHHcCCcCC------------------------------------CCCCCCHHHHHHHHHHhCCCcccCCCHHHHH
Confidence 5555544321110 1123788899999999999999999999998
Q ss_pred cC
Q 035861 305 NH 306 (332)
Q Consensus 305 ~h 306 (332)
..
T Consensus 278 ~~ 279 (283)
T cd05091 278 SR 279 (283)
T ss_pred HH
Confidence 64
No 302
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=3.3e-40 Score=288.19 Aligned_cols=288 Identities=20% Similarity=0.242 Sum_probs=196.6
Q ss_pred cccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCCeEE
Q 035861 14 EKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHDSVY 93 (332)
Q Consensus 14 ~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 93 (332)
.+.+.+|.| +.||.++...+++.||+|++......... ...+.+|+..+++++|+||+++++.+..+ ...+
T Consensus 5 ~i~~~~~~~--~~v~~~~~~~~~~~~avK~~~~~~~~~~~------~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~-~~~~ 75 (314)
T cd08216 5 LIGKCFEDL--MIVHLAKHKPTNTLVAVKKINLDSCSKED------LKLLQQEIITSRQLQHPNILPYVTSFIVD-SELY 75 (314)
T ss_pred hhhHhhcCC--ceEEEEEecCCCCEEEEEEEeccccchhH------HHHHHHHHHHHHhcCCcchhhhhheeecC-CeEE
Confidence 344444444 45566666668999999999764222211 12467899999999999999999998554 7789
Q ss_pred EEcccccccHHH-HHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCCCC
Q 035861 94 MVMEYMEHDLKW-LMESM-KQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPL 171 (332)
Q Consensus 94 lv~e~~~~~l~~-~~~~~-~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~~~ 171 (332)
++|||++++.+. .+... ...+++..+..++.|++.||+|||++||+|+||+|+||+++.++.++++||+.+.......
T Consensus 76 ~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~ 155 (314)
T cd08216 76 VVSPLMAYGSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHG 155 (314)
T ss_pred EEEeccCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEecCCceEEecCccceeecccc
Confidence 999999965444 44432 3568999999999999999999999999999999999999999999999999876542211
Q ss_pred C-------CCccccccccccchhhhcCC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCccc
Q 035861 172 K-------PYTSLVVTLWYRAPELLLGA-KKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWP 243 (332)
Q Consensus 172 ~-------~~~~~~~~~~y~aPE~~~~~-~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (332)
. ......++..|+|||.+... ..++.++|+||+|+++|+|++|..||..........+...... +.....
T Consensus 156 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~--~~~~~~ 233 (314)
T cd08216 156 KRQRVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTV--PCLLDK 233 (314)
T ss_pred ccccccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccC--cccccc
Confidence 1 12234566789999998653 3578899999999999999999999987655443333222111 100000
Q ss_pred CCCCCccccccccCCchhhhhh-hCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCCC
Q 035861 244 GLSELPGAKANFAKQPYNLLRK-RFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVPL 314 (332)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~ 314 (332)
. ..+................ ............++.++.+|+.+||..||++||+++++|+||||+.+..
T Consensus 234 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p~~~~~~~ 303 (314)
T cd08216 234 S--TYPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNHSFFKQCKR 303 (314)
T ss_pred C--chhhhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcCchHhhhcc
Confidence 0 0000000000000000000 0000011112225678889999999999999999999999999998763
No 303
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=2.8e-40 Score=283.96 Aligned_cols=250 Identities=24% Similarity=0.374 Sum_probs=194.7
Q ss_pred hhcccccccccccCcEEEEEEEEC-----CCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeee
Q 035861 10 VFEFEKLNKISEGTYGIVYRARDK-----KSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEV 84 (332)
Q Consensus 10 ~~~y~~~~~lg~g~~g~v~~~~~~-----~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~ 84 (332)
..+|++.++||+|+||.||++... .++..+++|.+....... ...+.+|++.++.++|+||+++++.
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~--------~~~~~~e~~~l~~l~h~~i~~~~~~ 75 (280)
T cd05092 4 RRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESA--------RQDFQREAELLTVLQHQHIVRFYGV 75 (280)
T ss_pred hHhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHH--------HHHHHHHHHHHhcCCCCCCceEEEE
Confidence 358899999999999999999743 346678888876432111 1246789999999999999999998
Q ss_pred EEcCCCeEEEEccccccc-HHHHHHhcC--------------CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEE
Q 035861 85 VMDDHDSVYMVMEYMEHD-LKWLMESMK--------------QPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLL 149 (332)
Q Consensus 85 ~~~~~~~~~lv~e~~~~~-l~~~~~~~~--------------~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nil 149 (332)
+... ...++++||++++ +.+.+.... ..+++..+..++.||+.||+|||+.|++|+||+|+||+
T Consensus 76 ~~~~-~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil 154 (280)
T cd05092 76 CTEG-RPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCL 154 (280)
T ss_pred EecC-CceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhEE
Confidence 8544 7789999999864 444444321 34889999999999999999999999999999999999
Q ss_pred EcCCCcEEEeecccccccCCCCC--CCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHH
Q 035861 150 LNNQGVLKICDFGMSRQYGSPLK--PYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA-KKPLFSGTTEVDQ 226 (332)
Q Consensus 150 i~~~~~~~l~df~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~llt-g~~pf~~~~~~~~ 226 (332)
+++++.++|+|||.+........ ......+++.|+|||.+.+ ..++.++|+||||+++|+|++ |..||......+.
T Consensus 155 ~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~ 233 (280)
T cd05092 155 VGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILY-RKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEA 233 (280)
T ss_pred EcCCCCEEECCCCceeEcCCCceeecCCCccccccccCHHHhcc-CCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHH
Confidence 99999999999998865422111 1122234678999999876 668999999999999999998 8999977766555
Q ss_pred HHHHHHHcCCCCCCcccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhc
Q 035861 227 IDKIFKTLGTPTETIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALN 305 (332)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 305 (332)
...+...... ..+..+++.+.+||.+||+.||++||++.+|++
T Consensus 234 ~~~~~~~~~~------------------------------------~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~ 276 (280)
T cd05092 234 IECITQGREL------------------------------------ERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHS 276 (280)
T ss_pred HHHHHcCccC------------------------------------CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 4444322110 111237888999999999999999999999975
No 304
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=6.3e-40 Score=278.91 Aligned_cols=249 Identities=23% Similarity=0.378 Sum_probs=198.3
Q ss_pred chhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcC
Q 035861 9 SVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDD 88 (332)
Q Consensus 9 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 88 (332)
..++|.+.+.||.|++|+||++... ++..+++|.+....... ..+.+|+..+++++|+|++++++.+. .
T Consensus 4 ~~~~~~i~~~ig~g~~~~v~~~~~~-~~~~~~vK~~~~~~~~~---------~~~~~e~~~l~~l~h~~i~~~~~~~~-~ 72 (261)
T cd05034 4 PRESLKLERKLGAGQFGEVWMGTWN-GTTKVAVKTLKPGTMSP---------EAFLQEAQIMKKLRHDKLVQLYAVCS-E 72 (261)
T ss_pred chhheeeeeeeccCcceEEEEEEEc-CCceEEEEEecCCccCH---------HHHHHHHHHHhhCCCCCEeeeeeeee-c
Confidence 3468999999999999999999976 45779999887543221 24678999999999999999999984 4
Q ss_pred CCeEEEEcccccc-cHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccc
Q 035861 89 HDSVYMVMEYMEH-DLKWLMESMK-QPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQ 166 (332)
Q Consensus 89 ~~~~~lv~e~~~~-~l~~~~~~~~-~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~ 166 (332)
....+++||++++ ++.+.+.... ..+++..+..++.|++.||++||++|++|+||+|+||+++.++.++|+|||.+..
T Consensus 73 ~~~~~~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili~~~~~~~l~d~g~~~~ 152 (261)
T cd05034 73 EEPIYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVGENLVCKIADFGLARL 152 (261)
T ss_pred CCceEEEEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEEcCCCCEEECcccccee
Confidence 4778999999986 4555554432 4689999999999999999999999999999999999999999999999999876
Q ss_pred cCCCCC-CCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCCCCCCcccC
Q 035861 167 YGSPLK-PYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA-KKPLFSGTTEVDQIDKIFKTLGTPTETIWPG 244 (332)
Q Consensus 167 ~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (332)
...... .......+..|+|||.+.+ ...+.++|+||||+++|++++ |..||...+.......+......
T Consensus 153 ~~~~~~~~~~~~~~~~~y~~PE~~~~-~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~-------- 223 (261)
T cd05034 153 IEDDEYTAREGAKFPIKWTAPEAANY-GRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQVERGYRM-------- 223 (261)
T ss_pred ccchhhhhhhccCCCccccCHHHhcc-CCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC--------
Confidence 542111 1112234567999999876 668999999999999999998 99999887766655554332111
Q ss_pred CCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhc
Q 035861 245 LSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALN 305 (332)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 305 (332)
..+...+.++.+++.+||+.+|++||+++++++
T Consensus 224 ----------------------------~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~ 256 (261)
T cd05034 224 ----------------------------PRPPNCPEELYDLMLQCWDKDPEERPTFEYLQS 256 (261)
T ss_pred ----------------------------CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence 111225788999999999999999999999874
No 305
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=6.2e-40 Score=278.18 Aligned_cols=245 Identities=25% Similarity=0.393 Sum_probs=198.3
Q ss_pred chhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcC
Q 035861 9 SVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDD 88 (332)
Q Consensus 9 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 88 (332)
...+|++.+.||.|++|.||++... ++.+++|.+..... ....+.+|+.+++.++|+|++++++.+..
T Consensus 4 ~~~~~~~~~~ig~g~~g~v~~~~~~--~~~v~iK~~~~~~~---------~~~~~~~e~~~l~~l~~~~i~~~~~~~~~- 71 (256)
T cd05039 4 NSKELKLGATIGKGEFGDVMLGDYR--GQKVAVKCLKDDST---------AAQAFLAEASVMTTLRHPNLVQLLGVVLQ- 71 (256)
T ss_pred ChhhccceeeeecCCCceEEEEEec--CcEEEEEEeccchh---------HHHHHHHHHHHHHhcCCcceeeeEEEEcC-
Confidence 3568999999999999999999886 78999999975432 01246789999999999999999999854
Q ss_pred CCeEEEEcccccc-cHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccc
Q 035861 89 HDSVYMVMEYMEH-DLKWLMESMK-QPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQ 166 (332)
Q Consensus 89 ~~~~~lv~e~~~~-~l~~~~~~~~-~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~ 166 (332)
....++|||++++ ++.+.+.... ..+++..+..++.|++.||+|||++|++|+||+|+||+++.++.++|+|||.+..
T Consensus 72 ~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili~~~~~~~l~d~g~~~~ 151 (256)
T cd05039 72 GNPLYIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLVSEDLVAKVSDFGLAKE 151 (256)
T ss_pred CCCeEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEEeCCCCEEEcccccccc
Confidence 5778999999996 5555554433 2689999999999999999999999999999999999999999999999999876
Q ss_pred cCCCCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCCCCCCcccCC
Q 035861 167 YGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA-KKPLFSGTTEVDQIDKIFKTLGTPTETIWPGL 245 (332)
Q Consensus 167 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (332)
..... .....+..|+|||.+.. ..++.++|+||||+++|++++ |..||...+..+....+....
T Consensus 152 ~~~~~---~~~~~~~~~~ape~~~~-~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~----------- 216 (256)
T cd05039 152 ASQGQ---DSGKLPVKWTAPEALRE-KKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHVEKGY----------- 216 (256)
T ss_pred ccccc---ccCCCcccccCchhhcC-CcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcCC-----------
Confidence 53221 13344567999999876 578899999999999999997 999998776554433332210
Q ss_pred CCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhc
Q 035861 246 SELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALN 305 (332)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 305 (332)
....+..+++.+.++|.+||..+|++||+++++++
T Consensus 217 -------------------------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 251 (256)
T cd05039 217 -------------------------RMEAPEGCPPEVYKVMKDCWELDPAKRPTFKQLRE 251 (256)
T ss_pred -------------------------CCCCccCCCHHHHHHHHHHhccChhhCcCHHHHHH
Confidence 00111236889999999999999999999999986
No 306
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=3.3e-40 Score=283.07 Aligned_cols=253 Identities=23% Similarity=0.370 Sum_probs=197.8
Q ss_pred chhcccccccccccCcEEEEEEEECCC-----CcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeee
Q 035861 9 SVFEFEKLNKISEGTYGIVYRARDKKS-----GEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKE 83 (332)
Q Consensus 9 ~~~~y~~~~~lg~g~~g~v~~~~~~~~-----~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~ 83 (332)
..++|++.+.||.|++|.||+|.+... +..|++|.+........ ...+.+|+..++.++|+||+++++
T Consensus 4 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~-------~~~~~~e~~~l~~~~~~~i~~~~~ 76 (277)
T cd05032 4 PREKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRE-------RIEFLNEASVMKEFNCHHVVRLLG 76 (277)
T ss_pred chHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHH-------HHHHHHHHHHHHhCCCCceeEEEE
Confidence 356899999999999999999998643 47899999754321111 124568999999999999999999
Q ss_pred eEEcCCCeEEEEcccccc-cHHHHHHhc---------CCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCC
Q 035861 84 VVMDDHDSVYMVMEYMEH-DLKWLMESM---------KQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQ 153 (332)
Q Consensus 84 ~~~~~~~~~~lv~e~~~~-~l~~~~~~~---------~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~ 153 (332)
++..+ ...++||||+++ ++.+.+... ...+++..+..++.|++.||.|||++|++|+||+|+||+++.+
T Consensus 77 ~~~~~-~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill~~~ 155 (277)
T cd05032 77 VVSTG-QPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVAED 155 (277)
T ss_pred EEcCC-CCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEEcCC
Confidence 98554 788999999985 555544332 1246888999999999999999999999999999999999999
Q ss_pred CcEEEeecccccccCCCC--CCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHH
Q 035861 154 GVLKICDFGMSRQYGSPL--KPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA-KKPLFSGTTEVDQIDKI 230 (332)
Q Consensus 154 ~~~~l~df~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~llt-g~~pf~~~~~~~~~~~~ 230 (332)
+.++|+|||.+....... .......++..|+|||.+.+ ..++.++|+||||+++|++++ |..||...+..+....+
T Consensus 156 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~ 234 (277)
T cd05032 156 LTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKD-GVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLKFV 234 (277)
T ss_pred CCEEECCcccchhhccCcccccCCCCCccccccCHHHHhc-CCCCcccchHHHHHHHHHhhccCCCCCccCCHHHHHHHH
Confidence 999999999887543221 11233455778999999876 568999999999999999998 99999877665554443
Q ss_pred HHHcCCCCCCcccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcC
Q 035861 231 FKTLGTPTETIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNH 306 (332)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 306 (332)
.... . ...+..++..+.+++.+||+.+|++||++.++++.
T Consensus 235 ~~~~-~-----------------------------------~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~ 274 (277)
T cd05032 235 IDGG-H-----------------------------------LDLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSS 274 (277)
T ss_pred hcCC-C-----------------------------------CCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence 3110 0 01112257889999999999999999999999863
No 307
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=4.8e-40 Score=281.33 Aligned_cols=251 Identities=22% Similarity=0.344 Sum_probs=193.1
Q ss_pred ccccccccccCcEEEEEEEECCCCc--EEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcC--
Q 035861 13 FEKLNKISEGTYGIVYRARDKKSGE--IVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDD-- 88 (332)
Q Consensus 13 y~~~~~lg~g~~g~v~~~~~~~~~~--~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-- 88 (332)
|.+.+.||+|++|.||+|++..++. .+|+|.+......... ...+..|+..++.++|+||+++++.+...
T Consensus 1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~------~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 74 (272)
T cd05075 1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSE------MEDFLSEAVCMKEFDHPNVMRLIGVCLQTVE 74 (272)
T ss_pred CccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHH------HHHHHHHHHHHHhCCCCCcceEEEEEccCCc
Confidence 4578899999999999999877665 6899988654322211 12456899999999999999999987432
Q ss_pred ---CCeEEEEcccccc-cHHHHHHh-----cCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEe
Q 035861 89 ---HDSVYMVMEYMEH-DLKWLMES-----MKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKIC 159 (332)
Q Consensus 89 ---~~~~~lv~e~~~~-~l~~~~~~-----~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~ 159 (332)
....++++||+.+ ++...+.. ....+++..+..++.|++.||+|||++|++|+||||+||+++.++.++|+
T Consensus 75 ~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~ 154 (272)
T cd05075 75 SEGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLNENMNVCVA 154 (272)
T ss_pred ccCCCCcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEEcCCCCEEEC
Confidence 1346899999986 44444322 12458999999999999999999999999999999999999999999999
Q ss_pred ecccccccCCCCC--CCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCC
Q 035861 160 DFGMSRQYGSPLK--PYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA-KKPLFSGTTEVDQIDKIFKTLGT 236 (332)
Q Consensus 160 df~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~llt-g~~pf~~~~~~~~~~~~~~~~~~ 236 (332)
|||.+........ ......++..|+|||.+.. ..++.++|+||||+++|++++ |..||...........+.....
T Consensus 155 Dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~- 232 (272)
T cd05075 155 DFGLSKKIYNGDYYRQGRIAKMPVKWIAIESLAD-RVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLRQGNR- 232 (272)
T ss_pred CCCcccccCcccceecCCcccCCcccCCHHHccC-CCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCC-
Confidence 9999886533221 1122345677999999876 678999999999999999999 7899977665554444332111
Q ss_pred CCCCcccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcC
Q 035861 237 PTETIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNH 306 (332)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 306 (332)
....+.++..+.++|.+||+.||++|||+.+|+++
T Consensus 233 -----------------------------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~ 267 (272)
T cd05075 233 -----------------------------------LKQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCE 267 (272)
T ss_pred -----------------------------------CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 01122367889999999999999999999999864
No 308
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=1.7e-40 Score=287.29 Aligned_cols=252 Identities=21% Similarity=0.370 Sum_probs=197.0
Q ss_pred hhcccccccccccCcEEEEEEEECCC-----CcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhC-CCCCeeeeee
Q 035861 10 VFEFEKLNKISEGTYGIVYRARDKKS-----GEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSF-DHPSIVNVKE 83 (332)
Q Consensus 10 ~~~y~~~~~lg~g~~g~v~~~~~~~~-----~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~ 83 (332)
.++|++.+.||+|++|.||++..... ...+++|.+........ ...+.+|+..++++ +|+||+++++
T Consensus 11 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~-------~~~~~~E~~~l~~l~~h~~i~~~~~ 83 (293)
T cd05053 11 RDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKD-------LSDLVSEMEMMKMIGKHKNIINLLG 83 (293)
T ss_pred HhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHH-------HHHHHHHHHHHHhhcCCCCeeeEEE
Confidence 35899999999999999999997643 36799998865322111 11356899999999 8999999999
Q ss_pred eEEcCCCeEEEEccccccc-HHHHHHh---------------cCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCC
Q 035861 84 VVMDDHDSVYMVMEYMEHD-LKWLMES---------------MKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSN 147 (332)
Q Consensus 84 ~~~~~~~~~~lv~e~~~~~-l~~~~~~---------------~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~N 147 (332)
++.. ....+++|||++++ +...+.. ....+++..+..++.|++.||+|||+.|++|+||+|+|
T Consensus 84 ~~~~-~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~N 162 (293)
T cd05053 84 VCTQ-EGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARN 162 (293)
T ss_pred EEcC-CCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCccccccceee
Confidence 8844 47799999999864 4444432 13468999999999999999999999999999999999
Q ss_pred EEEcCCCcEEEeecccccccCCCCC--CCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChH
Q 035861 148 LLLNNQGVLKICDFGMSRQYGSPLK--PYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA-KKPLFSGTTEV 224 (332)
Q Consensus 148 ili~~~~~~~l~df~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~llt-g~~pf~~~~~~ 224 (332)
|+++.++.++|+|||.+........ ......++..|+|||.+.+ ..++.++|+||||+++|++++ |..||...+..
T Consensus 163 il~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~ 241 (293)
T cd05053 163 VLVTEDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFD-RVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVE 241 (293)
T ss_pred EEEcCCCeEEeCccccccccccccceeccCCCCCCccccCHHHhcc-CCcCcccceeehhhHHHHHhcCCCCCCCCCCHH
Confidence 9999999999999999876533211 1122234567999999876 678999999999999999997 99999877766
Q ss_pred HHHHHHHHHcCCCCCCcccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHh
Q 035861 225 DQIDKIFKTLGTPTETIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDAL 304 (332)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell 304 (332)
+....+..... ...+..++..+.+|+.+||..||++|||+.+++
T Consensus 242 ~~~~~~~~~~~------------------------------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil 285 (293)
T cd05053 242 ELFKLLKEGYR------------------------------------MEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLV 285 (293)
T ss_pred HHHHHHHcCCc------------------------------------CCCCCCCCHHHHHHHHHHcccCcccCcCHHHHH
Confidence 55544432210 011123678899999999999999999999998
Q ss_pred cC
Q 035861 305 NH 306 (332)
Q Consensus 305 ~h 306 (332)
++
T Consensus 286 ~~ 287 (293)
T cd05053 286 ED 287 (293)
T ss_pred HH
Confidence 75
No 309
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=1e-39 Score=277.47 Aligned_cols=246 Identities=22% Similarity=0.375 Sum_probs=195.3
Q ss_pred hcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCC
Q 035861 11 FEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHD 90 (332)
Q Consensus 11 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 90 (332)
.+|.+.+.||.|++|+||++.+..+ ..+++|.+...... ...+.+|+.++++++|+|++++++.+ .. .
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~-~~~~lK~~~~~~~~---------~~~~~~E~~~l~~l~h~~i~~~~~~~-~~-~ 73 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGT-TKVAIKTLKPGTMM---------PEAFLQEAQIMKKLRHDKLVPLYAVV-SE-E 73 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCC-ceEEEEEcccCCcc---------HHHHHHHHHHHHhCCCCCeeeEEEEE-cC-C
Confidence 5799999999999999999988654 45899987643221 12466899999999999999999887 33 4
Q ss_pred eEEEEcccccc-cHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccC
Q 035861 91 SVYMVMEYMEH-DLKWLMESMK-QPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYG 168 (332)
Q Consensus 91 ~~~lv~e~~~~-~l~~~~~~~~-~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~ 168 (332)
..+++|||+++ ++.+.+.... ..+++..+..++.|++.||+|||+.|++|+||+|+||+++.++.++|+|||.+....
T Consensus 74 ~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~ 153 (260)
T cd05069 74 PIYIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVGDNLVCKIADFGLARLIE 153 (260)
T ss_pred CcEEEEEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCeEEECCCccceEcc
Confidence 57899999986 5666665433 458999999999999999999999999999999999999999999999999987653
Q ss_pred CCC-CCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCCCCCCcccCCC
Q 035861 169 SPL-KPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA-KKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLS 246 (332)
Q Consensus 169 ~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (332)
... .......++..|+|||.... ..++.++|+||||+++|++++ |..||......+....+......
T Consensus 154 ~~~~~~~~~~~~~~~y~~Pe~~~~-~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~---------- 222 (260)
T cd05069 154 DNEYTARQGAKFPIKWTAPEAALY-GRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVERGYRM---------- 222 (260)
T ss_pred CCcccccCCCccchhhCCHHHhcc-CCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC----------
Confidence 322 11222345677999998876 668999999999999999999 89999887665554443322110
Q ss_pred CCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhc
Q 035861 247 ELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALN 305 (332)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 305 (332)
..+..++..+.+++.+||+.||++||+++++++
T Consensus 223 --------------------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 255 (260)
T cd05069 223 --------------------------PCPQGCPESLHELMKLCWKKDPDERPTFEYIQS 255 (260)
T ss_pred --------------------------CCCcccCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 011236788999999999999999999999875
No 310
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.1e-41 Score=299.29 Aligned_cols=251 Identities=29% Similarity=0.411 Sum_probs=205.0
Q ss_pred cccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCCeEEEEcc
Q 035861 18 KISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHDSVYMVME 97 (332)
Q Consensus 18 ~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~lv~e 97 (332)
.||+|.+|+||-|++..|...+|||-+..+.... .+-+.+|+.+-++++|.||+++.|.+ ..+++.-|.||
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~--------~QPLhEEIaLH~~LrHkNIVrYLGs~-senGf~kIFME 652 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSRE--------VQPLHEEIALHSTLRHKNIVRYLGSV-SENGFFKIFME 652 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeecccccchh--------hccHHHHHHHHHHHhhHhHHHHhhcc-CCCCeEEEEee
Confidence 4999999999999999999999999987544322 22467899999999999999999998 44488899999
Q ss_pred cccccHHHHHHh-cCCCC--CHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcC-CCcEEEeecccccccCCCCCC
Q 035861 98 YMEHDLKWLMES-MKQPF--STSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNN-QGVLKICDFGMSRQYGSPLKP 173 (332)
Q Consensus 98 ~~~~~l~~~~~~-~~~~l--~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~-~~~~~l~df~~~~~~~~~~~~ 173 (332)
-++|+.+..+.+ .=+++ ++..+..+..||++||.|||++.|+|+|||-+|+||.. .|.+||+|||.++....-...
T Consensus 653 qVPGGSLSsLLrskWGPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAginP~ 732 (1226)
T KOG4279|consen 653 QVPGGSLSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINPC 732 (1226)
T ss_pred cCCCCcHHHHHHhccCCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEeeccceEEecccccchhhccCCcc
Confidence 999866555544 44788 89999999999999999999999999999999999975 689999999999887554444
Q ss_pred CccccccccccchhhhcC-CCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHH-HHHHHHcCCCCCCcccCCCCCccc
Q 035861 174 YTSLVVTLWYRAPELLLG-AKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQI-DKIFKTLGTPTETIWPGLSELPGA 251 (332)
Q Consensus 174 ~~~~~~~~~y~aPE~~~~-~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 251 (332)
-.+..||.-|||||++.. ...|..++|||||||++-||+||++||......+.. -++-.....
T Consensus 733 TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMFkVGmyKvH--------------- 797 (1226)
T KOG4279|consen 733 TETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMFKVGMYKVH--------------- 797 (1226)
T ss_pred ccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhhhhhcceecC---------------
Confidence 456789999999999963 456899999999999999999999999765433322 111111000
Q ss_pred cccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCC
Q 035861 252 KANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEV 312 (332)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~ 312 (332)
.+-+..+|.+++.||.+|+.+||.+||++.++|.+||++.-
T Consensus 798 --------------------P~iPeelsaeak~FilrcFepd~~~R~sA~~LL~DpFlq~~ 838 (1226)
T KOG4279|consen 798 --------------------PPIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQDPFLQHN 838 (1226)
T ss_pred --------------------CCCcHHHHHHHHHHHHHHcCCCcccCccHHHhccCcccccC
Confidence 01122378889999999999999999999999999999875
No 311
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=9.7e-42 Score=294.16 Aligned_cols=255 Identities=31% Similarity=0.462 Sum_probs=216.5
Q ss_pred ccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCCeEEE
Q 035861 15 KLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHDSVYM 94 (332)
Q Consensus 15 ~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~l 94 (332)
-.+.||+|-||+||-|+++.+|+.||||++.+-........ .+++|+.+|..+.||.|+.+.-.+ +..+..++
T Consensus 568 ~devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqes------qlR~EVaILq~l~HPGiV~le~M~-ET~ervFV 640 (888)
T KOG4236|consen 568 ADEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQES------QLRNEVAILQNLHHPGIVNLECMF-ETPERVFV 640 (888)
T ss_pred hHhhccCCcceeeecceecccCceeeeeeeecccCCCchHH------HHHHHHHHHHhcCCCCeeEEEEee-cCCceEEE
Confidence 35789999999999999999999999999987766544332 467999999999999999998877 66688999
Q ss_pred EcccccccHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCC---CcEEEeecccccccCCC
Q 035861 95 VMEYMEHDLKWLMESM-KQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQ---GVLKICDFGMSRQYGSP 170 (332)
Q Consensus 95 v~e~~~~~l~~~~~~~-~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~---~~~~l~df~~~~~~~~~ 170 (332)
|||.+.|+.++.+... .+.+++..-+.++.||+.||.|||-+||+|+||||+|||+... ..+||+|||+++..+..
T Consensus 641 VMEKl~GDMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEk 720 (888)
T KOG4236|consen 641 VMEKLHGDMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEK 720 (888)
T ss_pred EehhhcchHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCCCCCceeeccccceeecchh
Confidence 9999999998888664 5789999999999999999999999999999999999999754 48999999999987543
Q ss_pred CCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCCcc
Q 035861 171 LKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPG 250 (332)
Q Consensus 171 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (332)
.-.....||+.|.|||++.+ +.|+..-|+||+|+++|--++|..||.... +.-++|.+....
T Consensus 721 -sFRrsVVGTPAYLaPEVLrn-kGyNrSLDMWSVGVIiYVsLSGTFPFNEdE--dIndQIQNAaFM-------------- 782 (888)
T KOG4236|consen 721 -SFRRSVVGTPAYLAPEVLRN-KGYNRSLDMWSVGVIIYVSLSGTFPFNEDE--DINDQIQNAAFM-------------- 782 (888)
T ss_pred -hhhhhhcCCccccCHHHHhh-ccccccccceeeeEEEEEEecccccCCCcc--chhHHhhccccc--------------
Confidence 33456789999999999998 779999999999999999999999996543 334444443211
Q ss_pred ccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCC
Q 035861 251 AKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVP 313 (332)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~ 313 (332)
.+..+|+++++++.+||..+|+..-.+|-|++.-|.|||+++-.
T Consensus 783 -------------------yPp~PW~eis~~AidlIn~LLqVkm~kRysvdk~lsh~Wlq~yq 826 (888)
T KOG4236|consen 783 -------------------YPPNPWSEISPEAIDLINNLLQVKMRKRYSVDKSLSHPWLQDYQ 826 (888)
T ss_pred -------------------cCCCchhhcCHHHHHHHHHHHHHHHHHhcchHhhccchhhhcch
Confidence 12234566999999999999999999999999999999999854
No 312
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=7.2e-40 Score=277.94 Aligned_cols=242 Identities=26% Similarity=0.365 Sum_probs=190.0
Q ss_pred ccccccCcEEEEEEEECCCC---cEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCCeEE
Q 035861 17 NKISEGTYGIVYRARDKKSG---EIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHDSVY 93 (332)
Q Consensus 17 ~~lg~g~~g~v~~~~~~~~~---~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 93 (332)
+.||+|+||.||+|++..++ ..+++|.+....... ....+..|+..++++.|+|++++++++ .. ...+
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~-------~~~~~~~e~~~l~~l~h~~iv~~~~~~-~~-~~~~ 71 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAA-------GKKEFLREASVMAQLDHPCIVRLIGVC-KG-EPLM 71 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchH-------HHHHHHHHHHHHHhcCCCCeeeEEEEE-cC-CceE
Confidence 46999999999999876544 789999987554321 112467899999999999999999987 43 4578
Q ss_pred EEccccccc-HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCCCCC
Q 035861 94 MVMEYMEHD-LKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLK 172 (332)
Q Consensus 94 lv~e~~~~~-l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~~~~ 172 (332)
+|||+++++ +.+.+.. ...+++..+..++.|++.||++||..|++|+||+|+||+++.++.++|+|||.+........
T Consensus 72 ~v~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~ 150 (257)
T cd05060 72 LVMELAPLGPLLKYLKK-RREIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSD 150 (257)
T ss_pred EEEEeCCCCcHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEEcCCCcEEeccccccceeecCCc
Confidence 999999864 5554444 56899999999999999999999999999999999999999999999999999876543322
Q ss_pred CC---ccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCC
Q 035861 173 PY---TSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA-KKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSEL 248 (332)
Q Consensus 173 ~~---~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (332)
.. ....++..|+|||.+.. ..++.++|+||||+++|++++ |..||...+..+....+.....
T Consensus 151 ~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~~~~~~~------------- 216 (257)
T cd05060 151 YYRATTAGRWPLKWYAPECINY-GKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLESGER------------- 216 (257)
T ss_pred ccccccCccccccccCHHHhcC-CCCCccchHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCc-------------
Confidence 21 11223457999999876 668999999999999999998 9999987765544333322100
Q ss_pred ccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhc
Q 035861 249 PGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALN 305 (332)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 305 (332)
...+..++..++++|.+||..+|++||++.++++
T Consensus 217 -----------------------~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~ 250 (257)
T cd05060 217 -----------------------LPRPEECPQEIYSIMLSCWKYRPEDRPTFSELES 250 (257)
T ss_pred -----------------------CCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 0112236788999999999999999999999875
No 313
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=1.4e-39 Score=276.00 Aligned_cols=249 Identities=24% Similarity=0.421 Sum_probs=197.5
Q ss_pred hhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCC
Q 035861 10 VFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDH 89 (332)
Q Consensus 10 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 89 (332)
..+|++.+.||.|++|.||++.+. ++..+++|.+....... ..+..|++.+++++||+++++++.+ ...
T Consensus 3 ~~~~~~~~~ig~g~~g~v~~~~~~-~~~~~~~k~~~~~~~~~---------~~~~~e~~~l~~l~~~~i~~~~~~~-~~~ 71 (256)
T cd05112 3 PSELTLVQEIGSGQFGLVWLGYWL-EKRKVAIKTIREGAMSE---------EDFIEEAQVMMKLSHPKLVQLYGVC-TER 71 (256)
T ss_pred hhHeEEEeeecCcccceEEEEEEe-CCCeEEEEECCCCCCCH---------HHHHHHHHHHHhCCCCCeeeEEEEE-ccC
Confidence 458999999999999999999885 36789999886433221 1456899999999999999999988 444
Q ss_pred CeEEEEcccccccHHH-HHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccC
Q 035861 90 DSVYMVMEYMEHDLKW-LMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYG 168 (332)
Q Consensus 90 ~~~~lv~e~~~~~l~~-~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~ 168 (332)
...++++||++++.+. .+....+.+++..++.++.|++.+|++||+.|++|+||+|+||+++.++.++|+|||.+....
T Consensus 72 ~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~ 151 (256)
T cd05112 72 SPICLVFEFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVGENQVVKVSDFGMTRFVL 151 (256)
T ss_pred CceEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEEcCCCeEEECCCcceeecc
Confidence 7789999999875544 444445678999999999999999999999999999999999999999999999999887543
Q ss_pred CCCC-CCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCCCCCCcccCCC
Q 035861 169 SPLK-PYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA-KKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLS 246 (332)
Q Consensus 169 ~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (332)
.... ......++..|+|||.+.+ ..++.++|+||||+++|++++ |..||...........+.....
T Consensus 152 ~~~~~~~~~~~~~~~~~aPe~~~~-~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~----------- 219 (256)
T cd05112 152 DDQYTSSTGTKFPVKWSSPEVFSF-SKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETINAGFR----------- 219 (256)
T ss_pred cCcccccCCCccchhhcCHhHhcc-CCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHhCCCC-----------
Confidence 2211 1122334567999999876 678899999999999999998 9999987665554444322110
Q ss_pred CCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcC
Q 035861 247 ELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNH 306 (332)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 306 (332)
...+...+..+.+|+.+||+.+|++||++.++++.
T Consensus 220 -------------------------~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~ 254 (256)
T cd05112 220 -------------------------LYKPRLASQSVYELMQHCWKERPEDRPSFSLLLHQ 254 (256)
T ss_pred -------------------------CCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHh
Confidence 01112257889999999999999999999999864
No 314
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=6e-40 Score=280.79 Aligned_cols=251 Identities=20% Similarity=0.322 Sum_probs=194.1
Q ss_pred ccccccccccCcEEEEEEEECC---CCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCC
Q 035861 13 FEKLNKISEGTYGIVYRARDKK---SGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDH 89 (332)
Q Consensus 13 y~~~~~lg~g~~g~v~~~~~~~---~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 89 (332)
|++.+.||+|+||.||+|.... ++..||+|.+......... ...+..|+..++.++|+|++++++.+....
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~------~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~ 74 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSE------IEEFLSEAACMKDFDHPNVMKLIGVCFEAS 74 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHH------HHHHHHHHHHHHhCCCCCeeeEEeeeccCC
Confidence 6788999999999999998764 3478999998654322211 114568999999999999999999885443
Q ss_pred C-----eEEEEccccccc-HHHHHHhc-----CCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEE
Q 035861 90 D-----SVYMVMEYMEHD-LKWLMESM-----KQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKI 158 (332)
Q Consensus 90 ~-----~~~lv~e~~~~~-l~~~~~~~-----~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l 158 (332)
. ..++++||++++ +...+... ...+++..+..++.|++.||.|||+.|++|+||||+||++++++.++|
T Consensus 75 ~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl 154 (273)
T cd05035 75 SLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLREDMTVCV 154 (273)
T ss_pred ccccCcccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEECCCCeEEE
Confidence 2 478999999864 44333221 246899999999999999999999999999999999999999999999
Q ss_pred eecccccccCCCCCCC--ccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcC
Q 035861 159 CDFGMSRQYGSPLKPY--TSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA-KKPLFSGTTEVDQIDKIFKTLG 235 (332)
Q Consensus 159 ~df~~~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~llt-g~~pf~~~~~~~~~~~~~~~~~ 235 (332)
+|||.+.......... .....+..|+|||.+.. ..++.++|+||||+++|+|++ |..||......+....+.....
T Consensus 155 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~ 233 (273)
T cd05035 155 ADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLAD-RVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDYLRHGNR 233 (273)
T ss_pred CCccceeeccccccccccccccCCccccCHhhccc-CCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC
Confidence 9999987653322111 11234567999999866 678999999999999999999 8899987766555444432210
Q ss_pred CCCCCcccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcC
Q 035861 236 TPTETIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNH 306 (332)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 306 (332)
...+..++..+.+++.+||+.||.+||++.+++++
T Consensus 234 ------------------------------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~ 268 (273)
T cd05035 234 ------------------------------------LKQPEDCLDELYDLMYSCWRADPKDRPTFTKLREV 268 (273)
T ss_pred ------------------------------------CCCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 01112368889999999999999999999999875
No 315
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=6.4e-40 Score=284.08 Aligned_cols=250 Identities=22% Similarity=0.343 Sum_probs=193.8
Q ss_pred hcccccccccccCcEEEEEEEECCCCc--EEEEEEeecccCCcccccccCCCcchhHHHHHHhhC-CCCCeeeeeeeEEc
Q 035861 11 FEFEKLNKISEGTYGIVYRARDKKSGE--IVALKKVKMNVGRKEDCLEYGFPISSLREINILLSF-DHPSIVNVKEVVMD 87 (332)
Q Consensus 11 ~~y~~~~~lg~g~~g~v~~~~~~~~~~--~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~ 87 (332)
++|++.+.||.|+||.||+|....++. .+++|.+........ ...+..|+..+.++ .||||+++++.+.
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~-------~~~~~~E~~~l~~l~~hp~iv~~~~~~~- 73 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASEND-------HRDFAGELEVLCKLGHHPNIINLLGACE- 73 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHH-------HHHHHHHHHHHHhhcCCCchhheEEEEc-
Confidence 589999999999999999999876664 467777753221111 11456899999999 7999999999884
Q ss_pred CCCeEEEEcccccc-cHHHHHHhcC---------------CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEc
Q 035861 88 DHDSVYMVMEYMEH-DLKWLMESMK---------------QPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLN 151 (332)
Q Consensus 88 ~~~~~~lv~e~~~~-~l~~~~~~~~---------------~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~ 151 (332)
+....++++||+++ ++.+.+.... ..+++..+..++.|++.||++||++|++|+||||+||+++
T Consensus 74 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill~ 153 (297)
T cd05089 74 NRGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLVG 153 (297)
T ss_pred cCCcceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcceEEEC
Confidence 44778999999985 5555554321 3588999999999999999999999999999999999999
Q ss_pred CCCcEEEeecccccccCCCCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHH
Q 035861 152 NQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA-KKPLFSGTTEVDQIDKI 230 (332)
Q Consensus 152 ~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~llt-g~~pf~~~~~~~~~~~~ 230 (332)
.++.++|+|||++....... .......+..|+|||.+.. ..++.++|+||||+++|+|++ |..||...........+
T Consensus 154 ~~~~~kl~dfg~~~~~~~~~-~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~~~~~ 231 (297)
T cd05089 154 ENLASKIADFGLSRGEEVYV-KKTMGRLPVRWMAIESLNY-SVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELYEKL 231 (297)
T ss_pred CCCeEEECCcCCCcccccee-ccCCCCcCccccCchhhcc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Confidence 99999999999886432111 1112223456999998876 668999999999999999997 99999877665554443
Q ss_pred HHHcCCCCCCcccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcC
Q 035861 231 FKTLGTPTETIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNH 306 (332)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 306 (332)
..... ...+..++..+.+|+.+||+.+|.+||+++++++.
T Consensus 232 ~~~~~------------------------------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~ 271 (297)
T cd05089 232 PQGYR------------------------------------MEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQ 271 (297)
T ss_pred hcCCC------------------------------------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 22111 11122378899999999999999999999999765
No 316
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=6e-40 Score=280.01 Aligned_cols=251 Identities=26% Similarity=0.389 Sum_probs=197.5
Q ss_pred hhcccccccccccCcEEEEEEEECCCC---cEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEE
Q 035861 10 VFEFEKLNKISEGTYGIVYRARDKKSG---EIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVM 86 (332)
Q Consensus 10 ~~~y~~~~~lg~g~~g~v~~~~~~~~~---~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~ 86 (332)
..+|++.+.||.|+||.||+|.+..++ ..+++|.+........ ...+.+|+..+++++||||+++++.+.
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~-------~~~~~~e~~~l~~l~h~~i~~~~~~~~ 75 (267)
T cd05066 3 ASCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQ-------RRDFLSEASIMGQFDHPNIIHLEGVVT 75 (267)
T ss_pred HHHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHH-------HHHHHHHHHHHHhCCCCCcceEEEEEe
Confidence 458999999999999999999986444 3789998864321111 124678999999999999999999985
Q ss_pred cCCCeEEEEcccccc-cHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeeccccc
Q 035861 87 DDHDSVYMVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSR 165 (332)
Q Consensus 87 ~~~~~~~lv~e~~~~-~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~ 165 (332)
. ....++|||+++| ++.+.+....+.+++..+..++.|++.||++||+.|++|+||+|+||+++.++.++|+|||.+.
T Consensus 76 ~-~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~~l~dfg~~~ 154 (267)
T cd05066 76 K-SKPVMIVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVNSNLVCKVSDFGLSR 154 (267)
T ss_pred c-CCccEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEECCCCeEEeCCCCccc
Confidence 4 4788999999986 4555555545678999999999999999999999999999999999999999999999999987
Q ss_pred ccCCCCCCC---ccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCCCCCCc
Q 035861 166 QYGSPLKPY---TSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA-KKPLFSGTTEVDQIDKIFKTLGTPTETI 241 (332)
Q Consensus 166 ~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 241 (332)
......... ....++..|+|||.+.+ ..++.++|+||||+++|++++ |..||......+....+......
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~y~~pe~~~~-~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~~~----- 228 (267)
T cd05066 155 VLEDDPEAAYTTRGGKIPIRWTAPEAIAY-RKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKAIEEGYRL----- 228 (267)
T ss_pred ccccccceeeecCCCccceeecCHhHhcc-CccCchhhhHHHHHHHHHHhcCCCCCcccCCHHHHHHHHhCCCcC-----
Confidence 654322111 11223457999999976 668999999999999999886 99999877665544444322110
Q ss_pred ccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhc
Q 035861 242 WPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALN 305 (332)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 305 (332)
.....++..+.+++.+|++.+|.+||++.++++
T Consensus 229 -------------------------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 261 (267)
T cd05066 229 -------------------------------PAPMDCPAALHQLMLDCWQKDRNERPKFEQIVS 261 (267)
T ss_pred -------------------------------CCCCCCCHHHHHHHHHHcccCchhCCCHHHHHH
Confidence 011236788999999999999999999999875
No 317
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=1.1e-39 Score=276.78 Aligned_cols=242 Identities=26% Similarity=0.351 Sum_probs=189.4
Q ss_pred cccccCcEEEEEEEEC--CCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCCeEEEE
Q 035861 18 KISEGTYGIVYRARDK--KSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHDSVYMV 95 (332)
Q Consensus 18 ~lg~g~~g~v~~~~~~--~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~lv 95 (332)
.||+|+||.||+|.+. .++..||+|++....... ....+.+|+.++++++|+||+++++.+ +. ...++|
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~-------~~~~~~~E~~~l~~l~h~~ii~~~~~~-~~-~~~~lv 72 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKS-------VRDEMMREAEIMHQLDNPYIVRMIGVC-EA-EALMLV 72 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChH-------HHHHHHHHHHHHHhcCCCCeEEEEEEE-cC-CCeEEE
Confidence 4899999999999875 345579999886542211 112466899999999999999999987 43 568899
Q ss_pred ccccccc-HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCCCCCC-
Q 035861 96 MEYMEHD-LKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKP- 173 (332)
Q Consensus 96 ~e~~~~~-l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~~~~~- 173 (332)
|||++|+ +.+.+......+++..++.++.|++.||++||++|++|+||||+||+++.++.++|+|||.+.........
T Consensus 73 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~ 152 (257)
T cd05115 73 MEMASGGPLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYY 152 (257)
T ss_pred EEeCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEEcCCCcEEeccCCccccccCCccce
Confidence 9999865 44455445667999999999999999999999999999999999999999999999999998755332211
Q ss_pred --CccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCCcc
Q 035861 174 --YTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA-KKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPG 250 (332)
Q Consensus 174 --~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (332)
.....++..|+|||.+.. ..++.++|+||||+++|++++ |..||......+....+.....
T Consensus 153 ~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~--------------- 216 (257)
T cd05115 153 KARSAGKWPLKWYAPECINF-RKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFIEQGKR--------------- 216 (257)
T ss_pred eccCCCCCCcccCCHHHHcc-CCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCCC---------------
Confidence 112223567999999876 568999999999999999996 9999988776655444332211
Q ss_pred ccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhc
Q 035861 251 AKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALN 305 (332)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 305 (332)
...++.+++++.++|.+||+.+|++||++.+|++
T Consensus 217 ---------------------~~~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~ 250 (257)
T cd05115 217 ---------------------LDCPAECPPEMYALMKDCWIYKWEDRPNFAKVEE 250 (257)
T ss_pred ---------------------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 1112336889999999999999999999998865
No 318
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=100.00 E-value=8.8e-42 Score=283.97 Aligned_cols=295 Identities=28% Similarity=0.468 Sum_probs=218.0
Q ss_pred ccccchhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCC-C-CC----e
Q 035861 5 QGCRSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFD-H-PS----I 78 (332)
Q Consensus 5 ~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h-~~----i 78 (332)
.|.....+|.+.+.+|+|.||.|..+.++.++..||||+++.-....+ +.+-|++++.++. + |+ +
T Consensus 83 ~gD~l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~kYre---------Aa~iEi~vLqki~~~DP~g~~rc 153 (415)
T KOG0671|consen 83 VGDILTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVDKYRE---------AALIEIEVLQKINESDPNGKFRC 153 (415)
T ss_pred eccccccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHHHHhh---------HHHHHHHHHHHHHhcCCCCceEE
Confidence 455567899999999999999999999999999999999975433222 3457889998883 2 22 3
Q ss_pred eeeeeeEEcCCCeEEEEcccccccHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcC-----
Q 035861 79 VNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMK-QPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNN----- 152 (332)
Q Consensus 79 ~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~-~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~----- 152 (332)
+.+.+++ +-.+..|||+|.++-++.+.+..++ .+++...+..|++||++++++||+.+++|-||||+||++..
T Consensus 154 v~m~~wF-dyrghiCivfellG~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~~~~ 232 (415)
T KOG0671|consen 154 VQMRDWF-DYRGHICIVFELLGLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSEYFK 232 (415)
T ss_pred Eeeehhh-hccCceEEEEeccChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccceEE
Confidence 4444445 6668899999999988888887744 56899999999999999999999999999999999999842
Q ss_pred ---------------CCcEEEeecccccccCCCCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCC
Q 035861 153 ---------------QGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPL 217 (332)
Q Consensus 153 ---------------~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~p 217 (332)
+..|+|+|||+|+.... .......|..|+|||++.+ -.++.++|+||+||+|.|+.||...
T Consensus 233 ~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e---~hs~iVsTRHYRAPEViLg-LGwS~pCDvWSiGCIL~ElytG~~L 308 (415)
T KOG0671|consen 233 TYNPKKKVCFIRPLKSTAIKVIDFGSATFDHE---HHSTIVSTRHYRAPEVILG-LGWSQPCDVWSIGCILVELYTGETL 308 (415)
T ss_pred EeccCCccceeccCCCcceEEEecCCcceecc---CcceeeeccccCCchheec-cCcCCccCceeeeeEEEEeecccee
Confidence 23599999999987543 2356678999999999998 7799999999999999999999999
Q ss_pred CCCCChHHHHHHHHHHcCCCCCCcccCCCCCc-c--ccccccCCchhh-----hhhhCCCCcc-CCCCCCCchHHHHHHH
Q 035861 218 FSGTTEVDQIDKIFKTLGTPTETIWPGLSELP-G--AKANFAKQPYNL-----LRKRFPAASF-TGSPVLSESGFDLLNR 288 (332)
Q Consensus 218 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~-----~~~~~~~~~~-~~~~~~~~~~~~li~~ 288 (332)
|....+.+.+.-+.+.+++.|......-.... - ...++....... .+...+-... .........+.+||++
T Consensus 309 FqtHen~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~ 388 (415)
T KOG0671|consen 309 FQTHENLEHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRR 388 (415)
T ss_pred cccCCcHHHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHH
Confidence 99988888776666667765544322110000 0 000111000000 0000000000 0011123358899999
Q ss_pred hcCCCCCCCCCHHHHhcCCCCCCCC
Q 035861 289 LLTYDPEKRITVDDALNHYWFHEVP 313 (332)
Q Consensus 289 ~l~~dp~~Rps~~ell~hp~f~~~~ 313 (332)
||.+||.+|+|+.|+|.||||+...
T Consensus 389 mL~fDP~~RiTl~EAL~HpFF~~~~ 413 (415)
T KOG0671|consen 389 MLEFDPARRITLREALSHPFFARLT 413 (415)
T ss_pred HHccCccccccHHHHhcCHHhhcCC
Confidence 9999999999999999999999864
No 319
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=3.1e-41 Score=296.93 Aligned_cols=255 Identities=22% Similarity=0.352 Sum_probs=210.3
Q ss_pred cccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCC-CeE
Q 035861 14 EKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDH-DSV 92 (332)
Q Consensus 14 ~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~ 92 (332)
++...||+|+|-+||+|.+..+|..||--.+......+... -..++..|+.+|+.|+|+||++++..+.+.. ...
T Consensus 43 k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~----~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~i 118 (632)
T KOG0584|consen 43 KFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPE----ELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTI 118 (632)
T ss_pred ehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChH----HHHHHHHHHHHHccCCCCceeeeeeheecCCCcee
Confidence 45577999999999999999999888765544332222111 0125779999999999999999999997653 357
Q ss_pred EEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--cccccCCCCCEEEcCC-CcEEEeecccccccCC
Q 035861 93 YMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNW--VLHRDLKTSNLLLNNQ-GVLKICDFGMSRQYGS 169 (332)
Q Consensus 93 ~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~--i~H~di~p~Nili~~~-~~~~l~df~~~~~~~~ 169 (332)
-+|+|.+.++++...+++.+.++...++.|++||+.||.|||++. |+|||||=+||||+++ |.|||+|+|+|+....
T Consensus 119 n~iTEL~TSGtLr~Y~kk~~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~ 198 (632)
T KOG0584|consen 119 NFITELFTSGTLREYRKKHRRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRK 198 (632)
T ss_pred eeeeecccCCcHHHHHHHhccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCcCceeecchhHHHHhhc
Confidence 789999998877777777999999999999999999999999986 9999999999999865 8999999999998643
Q ss_pred CCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCC-ChHHHHHHHHHHcCCCCCCcccCCCCC
Q 035861 170 PLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGT-TEVDQIDKIFKTLGTPTETIWPGLSEL 248 (332)
Q Consensus 170 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (332)
. .....+|||.|||||.+.. .|+...||||||++|+||+|+..||... +..+.++++..+..+..
T Consensus 199 s--~aksvIGTPEFMAPEmYEE--~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~SGiKP~s---------- 264 (632)
T KOG0584|consen 199 S--HAKSVIGTPEFMAPEMYEE--NYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTSGIKPAA---------- 264 (632)
T ss_pred c--ccceeccCccccChHHHhh--hcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHcCCCHHH----------
Confidence 3 2344799999999999874 6899999999999999999999999876 55566677765532221
Q ss_pred ccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCC
Q 035861 249 PGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEV 312 (332)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~ 312 (332)
....-++++++||.+||.. ..+|+|+.|+|.||||..-
T Consensus 265 -------------------------l~kV~dPevr~fIekCl~~-~~~R~sa~eLL~d~Ff~~d 302 (632)
T KOG0584|consen 265 -------------------------LSKVKDPEVREFIEKCLAT-KSERLSAKELLKDPFFDED 302 (632)
T ss_pred -------------------------hhccCCHHHHHHHHHHhcC-chhccCHHHHhhChhhccc
Confidence 1222478999999999999 9999999999999999984
No 320
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=5.6e-40 Score=289.88 Aligned_cols=254 Identities=21% Similarity=0.387 Sum_probs=193.3
Q ss_pred hhcccccccccccCcEEEEEEEEC-----CCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhC-CCCCeeeeee
Q 035861 10 VFEFEKLNKISEGTYGIVYRARDK-----KSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSF-DHPSIVNVKE 83 (332)
Q Consensus 10 ~~~y~~~~~lg~g~~g~v~~~~~~-----~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~ 83 (332)
.++|++.+.||.|+||+||+|.+. .+++.||||++........ ...+.+|+.++.++ .|+||+++++
T Consensus 6 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~-------~~~~~~E~~~l~~l~~h~niv~~~~ 78 (343)
T cd05103 6 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSE-------HRALMSELKILIHIGHHLNVVNLLG 78 (343)
T ss_pred hhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHH-------HHHHHHHHHHHHhccCCccHhhhcc
Confidence 358999999999999999999853 4577899999865432111 11466899999999 6899999999
Q ss_pred eEEcCCCeEEEEccccccc-HHHHHHhcC---------------------------------------------------
Q 035861 84 VVMDDHDSVYMVMEYMEHD-LKWLMESMK--------------------------------------------------- 111 (332)
Q Consensus 84 ~~~~~~~~~~lv~e~~~~~-l~~~~~~~~--------------------------------------------------- 111 (332)
.+.......+++|||++++ +.+.+....
T Consensus 79 ~~~~~~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (343)
T cd05103 79 ACTKPGGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSL 158 (343)
T ss_pred eeecCCCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCcc
Confidence 8876667789999999964 444443211
Q ss_pred ---------------CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCCCCC--CC
Q 035861 112 ---------------QPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLK--PY 174 (332)
Q Consensus 112 ---------------~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~~~~--~~ 174 (332)
..++...+..++.|++.||+|||++|++|+||||.||+++.++.++|+|||.+........ ..
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~ 238 (343)
T cd05103 159 SDVEEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRK 238 (343)
T ss_pred ccchhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhc
Confidence 2367788899999999999999999999999999999999999999999999876422111 11
Q ss_pred ccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCCccccc
Q 035861 175 TSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA-KKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGAKA 253 (332)
Q Consensus 175 ~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (332)
....++..|+|||.+.+ ..++.++|+||||+++|++++ |..||.................
T Consensus 239 ~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~------------------ 299 (343)
T cd05103 239 GDARLPLKWMAPETIFD-RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT------------------ 299 (343)
T ss_pred CCCCCCcceECcHHhcC-CCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHHHhccC------------------
Confidence 22334567999999876 678999999999999999997 8899876543222222211100
Q ss_pred cccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcC
Q 035861 254 NFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNH 306 (332)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 306 (332)
....+..+++++.+++.+||+.||++||++.+|++|
T Consensus 300 -----------------~~~~~~~~~~~~~~~~~~cl~~~p~~Rps~~eil~~ 335 (343)
T cd05103 300 -----------------RMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 335 (343)
T ss_pred -----------------CCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 000112257789999999999999999999999986
No 321
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=1.4e-39 Score=277.92 Aligned_cols=251 Identities=25% Similarity=0.388 Sum_probs=197.0
Q ss_pred hhcccccccccccCcEEEEEEEECCCCc---EEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEE
Q 035861 10 VFEFEKLNKISEGTYGIVYRARDKKSGE---IVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVM 86 (332)
Q Consensus 10 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~---~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~ 86 (332)
.++|+..+.||+|++|.||+|....++. .+++|.+........ ...+..|+..+++++|+|++++.+.+.
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~-------~~~~~~e~~~l~~l~h~~i~~~~~~~~ 76 (268)
T cd05063 4 PSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQ-------RQDFLSEASIMGQFSHHNIIRLEGVVT 76 (268)
T ss_pred hHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHH-------HHHHHHHHHHHhcCCCCCeeEEEEEEc
Confidence 4588999999999999999999875554 688988864322111 124568999999999999999999984
Q ss_pred cCCCeEEEEcccccccHH-HHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeeccccc
Q 035861 87 DDHDSVYMVMEYMEHDLK-WLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSR 165 (332)
Q Consensus 87 ~~~~~~~lv~e~~~~~l~-~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~ 165 (332)
.....++|||+++++.+ +.+....+.+++..+..++.|++.||++||+.|++|+||+|+||+++.++.++|+|||.+.
T Consensus 77 -~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~ 155 (268)
T cd05063 77 -KFKPAMIITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILVNSNLECKVSDFGLSR 155 (268)
T ss_pred -cCCCcEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEEcCCCcEEECCCccce
Confidence 44778999999997544 4444445679999999999999999999999999999999999999999999999999987
Q ss_pred ccCCCCCCCc---cccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCCCCCCc
Q 035861 166 QYGSPLKPYT---SLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA-KKPLFSGTTEVDQIDKIFKTLGTPTETI 241 (332)
Q Consensus 166 ~~~~~~~~~~---~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 241 (332)
.......... ....+..|+|||.+.. ..++.++|+||||+++|++++ |..||...+..+....+......+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~-~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~~~~~i~~~~~~~---- 230 (268)
T cd05063 156 VLEDDPEGTYTTSGGKIPIRWTAPEAIAY-RKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHEVMKAINDGFRLP---- 230 (268)
T ss_pred ecccccccceeccCCCcCceecCHHHhhc-CCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhcCCCCC----
Confidence 6532211111 1122456999999876 568999999999999999997 999998776655554443211100
Q ss_pred ccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhc
Q 035861 242 WPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALN 305 (332)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 305 (332)
....++.++.+++.+||+.+|++||++.+|++
T Consensus 231 --------------------------------~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~ 262 (268)
T cd05063 231 --------------------------------APMDCPSAVYQLMLQCWQQDRARRPRFVDIVN 262 (268)
T ss_pred --------------------------------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 11126788999999999999999999999985
No 322
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=8.5e-40 Score=284.67 Aligned_cols=251 Identities=21% Similarity=0.352 Sum_probs=193.8
Q ss_pred hcccccccccccCcEEEEEEEECC-------CCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhC-CCCCeeeee
Q 035861 11 FEFEKLNKISEGTYGIVYRARDKK-------SGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSF-DHPSIVNVK 82 (332)
Q Consensus 11 ~~y~~~~~lg~g~~g~v~~~~~~~-------~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~ 82 (332)
++|.+.+.||+|+||.||++.+.. +...+|+|.+........ ...+..|+.+++.+ +|+||++++
T Consensus 18 ~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~-------~~~~~~e~~~l~~l~~h~~i~~~~ 90 (307)
T cd05098 18 DRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKD-------LSDLISEMEMMKMIGKHKNIINLL 90 (307)
T ss_pred HHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHH-------HHHHHHHHHHHHHhcCCCCEeeEE
Confidence 689999999999999999998643 234699998865321111 11356799999999 799999999
Q ss_pred eeEEcCCCeEEEEcccccc-cHHHHHHhcC---------------CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCC
Q 035861 83 EVVMDDHDSVYMVMEYMEH-DLKWLMESMK---------------QPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTS 146 (332)
Q Consensus 83 ~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~---------------~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~ 146 (332)
+.+..+ ...++||||+++ ++.+.+.... ..+++..++.++.|++.||+|||++|++|+||+|+
T Consensus 91 ~~~~~~-~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~ 169 (307)
T cd05098 91 GACTQD-GPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAAR 169 (307)
T ss_pred EEEecC-CceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCcccccccHH
Confidence 998554 678999999986 5555554421 24788999999999999999999999999999999
Q ss_pred CEEEcCCCcEEEeecccccccCCCCCC--CccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCh
Q 035861 147 NLLLNNQGVLKICDFGMSRQYGSPLKP--YTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA-KKPLFSGTTE 223 (332)
Q Consensus 147 Nili~~~~~~~l~df~~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~llt-g~~pf~~~~~ 223 (332)
||+++.++.++|+|||.+......... .....++..|+|||.+.+ ..++.++|+||||+++|+|++ |..||...+.
T Consensus 170 Nill~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~ 248 (307)
T cd05098 170 NVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFD-RIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV 248 (307)
T ss_pred heEEcCCCcEEECCCcccccccccchhhccccCCCccceeChHHhcc-CCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCH
Confidence 999999999999999998754321111 112233467999999876 668999999999999999998 8888877665
Q ss_pred HHHHHHHHHHcCCCCCCcccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHH
Q 035861 224 VDQIDKIFKTLGTPTETIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDA 303 (332)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~el 303 (332)
.+....+.... ....+..++.++.+|+.+||..+|++||++.++
T Consensus 249 ~~~~~~~~~~~------------------------------------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ev 292 (307)
T cd05098 249 EELFKLLKEGH------------------------------------RMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQL 292 (307)
T ss_pred HHHHHHHHcCC------------------------------------CCCCCCcCCHHHHHHHHHHcccChhhCcCHHHH
Confidence 44433332110 001122368899999999999999999999999
Q ss_pred hcC
Q 035861 304 LNH 306 (332)
Q Consensus 304 l~h 306 (332)
+++
T Consensus 293 l~~ 295 (307)
T cd05098 293 VED 295 (307)
T ss_pred HHH
Confidence 875
No 323
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=1.4e-39 Score=282.53 Aligned_cols=253 Identities=21% Similarity=0.338 Sum_probs=196.3
Q ss_pred chhcccccccccccCcEEEEEEEEC-----CCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhC-CCCCeeeee
Q 035861 9 SVFEFEKLNKISEGTYGIVYRARDK-----KSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSF-DHPSIVNVK 82 (332)
Q Consensus 9 ~~~~y~~~~~lg~g~~g~v~~~~~~-----~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~ 82 (332)
..++|.+.+.||+|+||.||++.+. .++..+|+|.+........ ...+.+|+.+++++ +|+||++++
T Consensus 33 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~-------~~~~~~E~~~l~~l~~h~~iv~~~ 105 (302)
T cd05055 33 PRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSE-------REALMSELKIMSHLGNHENIVNLL 105 (302)
T ss_pred cHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHH-------HHHHHHHHHHHHhccCCCCcceEE
Confidence 4458999999999999999999852 3456799998865432111 12456899999999 799999999
Q ss_pred eeEEcCCCeEEEEcccccc-cHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEee
Q 035861 83 EVVMDDHDSVYMVMEYMEH-DLKWLMESMK-QPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICD 160 (332)
Q Consensus 83 ~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~-~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~d 160 (332)
+.+... ...+++|||+.+ ++.+.+.... ..+++..+..++.|++.||+|||+.|++|+||+|+||+++.++.++++|
T Consensus 106 ~~~~~~-~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~d 184 (302)
T cd05055 106 GACTIG-GPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLLTHGKIVKICD 184 (302)
T ss_pred EEEecC-CceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEEcCCCeEEECC
Confidence 988444 778999999986 4555554433 3489999999999999999999999999999999999999999999999
Q ss_pred cccccccCCCCC--CCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCCC
Q 035861 161 FGMSRQYGSPLK--PYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA-KKPLFSGTTEVDQIDKIFKTLGTP 237 (332)
Q Consensus 161 f~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~llt-g~~pf~~~~~~~~~~~~~~~~~~~ 237 (332)
||.+........ ......++..|+|||.+.+ ..++.++|+||+|+++|++++ |..||..........+......
T Consensus 185 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~~~~~~~~-- 261 (302)
T cd05055 185 FGLARDIMNDSNYVVKGNARLPVKWMAPESIFN-CVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKLIKEGY-- 261 (302)
T ss_pred CcccccccCCCceeecCCCCcccccCCHhhhcc-CCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHHHHHHcCC--
Confidence 999875532211 1122345678999999877 568999999999999999998 9999977665444333322110
Q ss_pred CCCcccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhc
Q 035861 238 TETIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALN 305 (332)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 305 (332)
....+...+..+.+|+.+||+.+|++||++.++++
T Consensus 262 ---------------------------------~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~ 296 (302)
T cd05055 262 ---------------------------------RMAQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQ 296 (302)
T ss_pred ---------------------------------cCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 00112236788999999999999999999999985
No 324
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=8.4e-40 Score=281.03 Aligned_cols=252 Identities=22% Similarity=0.334 Sum_probs=197.5
Q ss_pred hhcccccccccccCcEEEEEEEECC----CCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeE
Q 035861 10 VFEFEKLNKISEGTYGIVYRARDKK----SGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVV 85 (332)
Q Consensus 10 ~~~y~~~~~lg~g~~g~v~~~~~~~----~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~ 85 (332)
-++|++.+.||+|+||.||+|.+.. ++..|++|++........ ...+.+|+..++.++|+|++++++++
T Consensus 5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~-------~~~~~~e~~~l~~l~h~ni~~~~~~~ 77 (280)
T cd05043 5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQ-------VTLLLQESCLLYGLSHQNILPILHVC 77 (280)
T ss_pred hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHH-------HHHHHHHHHHHHhCCCCCCCeEEEEE
Confidence 4689999999999999999999875 357888888753221111 12456899999999999999999998
Q ss_pred EcCCCeEEEEcccccc-cHHHHHHhcC-------CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEE
Q 035861 86 MDDHDSVYMVMEYMEH-DLKWLMESMK-------QPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLK 157 (332)
Q Consensus 86 ~~~~~~~~lv~e~~~~-~l~~~~~~~~-------~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~ 157 (332)
..+....+++++++++ ++.+.+.... ..+++..+..++.|++.||+|||++|++|+||+|+||+++.++.++
T Consensus 78 ~~~~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~~~~~~~k 157 (280)
T cd05043 78 IEDGEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVIDEELQVK 157 (280)
T ss_pred ecCCCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEEcCCCcEE
Confidence 7766788999999985 5555444321 4589999999999999999999999999999999999999999999
Q ss_pred EeecccccccCCCCC--CCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHc
Q 035861 158 ICDFGMSRQYGSPLK--PYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA-KKPLFSGTTEVDQIDKIFKTL 234 (332)
Q Consensus 158 l~df~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~llt-g~~pf~~~~~~~~~~~~~~~~ 234 (332)
|+|||+++....... ......++..|+|||.+.. ..++.++|+||||+++|++++ |..||...+..+....+....
T Consensus 158 l~d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~-~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~ 236 (280)
T cd05043 158 ITDNALSRDLFPMDYHCLGDNENRPVKWMALESLVN-KEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFEMAAYLKDGY 236 (280)
T ss_pred ECCCCCcccccCCceEEeCCCCCcchhccCHHHHhc-CCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHHHHHHHHcCC
Confidence 999999875432111 1122345667999999876 668999999999999999999 999998776655443332211
Q ss_pred CCCCCCcccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhc
Q 035861 235 GTPTETIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALN 305 (332)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 305 (332)
. ......+++++.+++.+||+.||++||++.++++
T Consensus 237 ~------------------------------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~ 271 (280)
T cd05043 237 R------------------------------------LAQPINCPDELFAVMACCWALDPEERPSFSQLVQ 271 (280)
T ss_pred C------------------------------------CCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 0 0111226788999999999999999999999985
No 325
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=9.9e-40 Score=292.29 Aligned_cols=252 Identities=21% Similarity=0.333 Sum_probs=192.2
Q ss_pred hhcccccccccccCcEEEEEEEECCC-----CcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCC-CCCeeeeee
Q 035861 10 VFEFEKLNKISEGTYGIVYRARDKKS-----GEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFD-HPSIVNVKE 83 (332)
Q Consensus 10 ~~~y~~~~~lg~g~~g~v~~~~~~~~-----~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~ 83 (332)
.++|.+++.||.|+||+||+|.+... +..||||++........ ...+.+|+.+++++. ||||+++++
T Consensus 36 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~-------~~~~~~Ei~~l~~l~~HpnIv~l~~ 108 (400)
T cd05105 36 RDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSE-------KQALMSELKIMTHLGPHLNIVNLLG 108 (400)
T ss_pred ccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHH-------HHHHHHHHHHHHhcCCCCCeeeEEE
Confidence 35888999999999999999987432 34699999865432111 124678999999995 999999999
Q ss_pred eEEcCCCeEEEEccccccc-HHHHHHhc----------------------------------------------------
Q 035861 84 VVMDDHDSVYMVMEYMEHD-LKWLMESM---------------------------------------------------- 110 (332)
Q Consensus 84 ~~~~~~~~~~lv~e~~~~~-l~~~~~~~---------------------------------------------------- 110 (332)
.+ .+....|+||||++++ +.+.+...
T Consensus 109 ~~-~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (400)
T cd05105 109 AC-TKSGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQ 187 (400)
T ss_pred EE-ccCCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccc
Confidence 98 4457899999999864 44433221
Q ss_pred -------------------------------------------CCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCC
Q 035861 111 -------------------------------------------KQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSN 147 (332)
Q Consensus 111 -------------------------------------------~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~N 147 (332)
...+++..+..++.|++.||+|||+.|++|+||||+|
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~N 267 (400)
T cd05105 188 YVPMLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKNCVHRDLAARN 267 (400)
T ss_pred cchhhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHh
Confidence 1247788889999999999999999999999999999
Q ss_pred EEEcCCCcEEEeecccccccCCCCC--CCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChH
Q 035861 148 LLLNNQGVLKICDFGMSRQYGSPLK--PYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA-KKPLFSGTTEV 224 (332)
Q Consensus 148 ili~~~~~~~l~df~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~llt-g~~pf~~~~~~ 224 (332)
|+++.++.++|+|||++........ ......++..|+|||.+.+ ..++.++|+||||+++|+|++ |..||......
T Consensus 268 ill~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~ 346 (400)
T cd05105 268 VLLAQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFD-NLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVD 346 (400)
T ss_pred EEEeCCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcC-CCCCchhhHHHHHHHHHHHHHCCCCCCcccchh
Confidence 9999999999999999876532211 1223345678999999876 668999999999999999997 89998765433
Q ss_pred HHHHHHHHHcCCCCCCcccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHh
Q 035861 225 DQIDKIFKTLGTPTETIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDAL 304 (332)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell 304 (332)
........... .......++..+.+++.+||+.||++||++.+|.
T Consensus 347 ~~~~~~~~~~~-----------------------------------~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~ 391 (400)
T cd05105 347 STFYNKIKSGY-----------------------------------RMAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLS 391 (400)
T ss_pred HHHHHHHhcCC-----------------------------------CCCCCccCCHHHHHHHHHHCccCHhHCcCHHHHH
Confidence 22222211100 0111223688899999999999999999999887
Q ss_pred c
Q 035861 305 N 305 (332)
Q Consensus 305 ~ 305 (332)
+
T Consensus 392 ~ 392 (400)
T cd05105 392 D 392 (400)
T ss_pred H
Confidence 5
No 326
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-40 Score=310.54 Aligned_cols=250 Identities=24% Similarity=0.427 Sum_probs=208.4
Q ss_pred hcccccccccccCcEEEEEEEECCCCc-----EEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeE
Q 035861 11 FEFEKLNKISEGTYGIVYRARDKKSGE-----IVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVV 85 (332)
Q Consensus 11 ~~y~~~~~lg~g~~g~v~~~~~~~~~~-----~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~ 85 (332)
...+..+.||+|+||.||.|....... .||||.+.......+ ...+++|+.+|+.++||||++++|++
T Consensus 692 ~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~-------~~~Fl~Ea~~m~~f~HpNiv~liGv~ 764 (1025)
T KOG1095|consen 692 KNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQE-------VSDFLKEALLMSKFDHPNIVSLIGVC 764 (1025)
T ss_pred hheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHH-------HHHHHHHHHHHhcCCCcceeeEEEee
Confidence 356788899999999999999765333 388888865432221 12678999999999999999999999
Q ss_pred EcCCCeEEEEcccccc-cHHHHHHhc------CCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEE
Q 035861 86 MDDHDSVYMVMEYMEH-DLKWLMESM------KQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKI 158 (332)
Q Consensus 86 ~~~~~~~~lv~e~~~~-~l~~~~~~~------~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l 158 (332)
.+ ....+|++||++| +|+..++.. ...++..+++.++.|||.|..||++++++|+||...|+|++....|||
T Consensus 765 l~-~~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~~~r~VKI 843 (1025)
T KOG1095|consen 765 LD-SGPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLLDERRVVKI 843 (1025)
T ss_pred cC-CCCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheeecccCcEEE
Confidence 88 4788999999985 788888876 567999999999999999999999999999999999999999999999
Q ss_pred eeccccccc-CCCCCCCcc-ccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcC
Q 035861 159 CDFGMSRQY-GSPLKPYTS-LVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA-KKPLFSGTTEVDQIDKIFKTLG 235 (332)
Q Consensus 159 ~df~~~~~~-~~~~~~~~~-~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~llt-g~~pf~~~~~~~~~~~~~~~~~ 235 (332)
+|||+|+.. +........ ..-...|||||.+.+ ..++.+||||||||++||++| |..||.+.+..+.......+
T Consensus 844 aDFGlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d-~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~~~~~g-- 920 (1025)
T KOG1095|consen 844 ADFGLARDIYDKDYYRKHGEAMLPVKWMPPESLKD-GIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLLDVLEG-- 920 (1025)
T ss_pred cccchhHhhhhchheeccCccccceecCCHHHHhh-cccccccchhhhHHHHHHHHhCCCCCCCCcchHHHHHHHHhC--
Confidence 999999943 211111111 123467999999998 789999999999999999999 89999999888777655443
Q ss_pred CCCCCcccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhc
Q 035861 236 TPTETIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALN 305 (332)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 305 (332)
.+++.++.++..+.+++.+||+.+|++||++..|++
T Consensus 921 ----------------------------------gRL~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~ 956 (1025)
T KOG1095|consen 921 ----------------------------------GRLDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVE 956 (1025)
T ss_pred ----------------------------------CccCCCCCCChHHHHHHHHHccCChhhCccHHHHHh
Confidence 355666779999999999999999999999999988
No 327
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=1.8e-39 Score=278.91 Aligned_cols=250 Identities=25% Similarity=0.395 Sum_probs=197.9
Q ss_pred hhcccccccccccCcEEEEEEEECCCCc----EEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeE
Q 035861 10 VFEFEKLNKISEGTYGIVYRARDKKSGE----IVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVV 85 (332)
Q Consensus 10 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~----~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~ 85 (332)
..+|++.+.||+|+||+||+|.+..+++ .+++|......... ....+.+|+..+++++|+|++++++++
T Consensus 6 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~-------~~~~~~~e~~~l~~l~h~~i~~~~~~~ 78 (279)
T cd05057 6 ETELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPK-------ANKEILDEAYVMASVDHPHVVRLLGIC 78 (279)
T ss_pred HHHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHH-------HHHHHHHHHHHHHhCCCCCcceEEEEE
Confidence 4589999999999999999999876654 58888876543211 112456899999999999999999998
Q ss_pred EcCCCeEEEEcccccc-cHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccc
Q 035861 86 MDDHDSVYMVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMS 164 (332)
Q Consensus 86 ~~~~~~~~lv~e~~~~-~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~ 164 (332)
.. ...++|+|++++ ++.+.+......+++..+..++.|++.||+|||++|++|+||+|+||+++.++.++|+|||.+
T Consensus 79 ~~--~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~~~~~~~kL~dfg~~ 156 (279)
T cd05057 79 LS--SQVQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLVKTPQHVKITDFGLA 156 (279)
T ss_pred ec--CceEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEEcCCCeEEECCCccc
Confidence 54 678899999985 566666655567999999999999999999999999999999999999999999999999998
Q ss_pred cccCCCCCCC--ccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCCCCCCc
Q 035861 165 RQYGSPLKPY--TSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA-KKPLFSGTTEVDQIDKIFKTLGTPTETI 241 (332)
Q Consensus 165 ~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 241 (332)
.......... ....++..|+|||.+.. ..++.++|+||||+++|++++ |..||......+....+.....
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~-~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~------ 229 (279)
T cd05057 157 KLLDVDEKEYHAEGGKVPIKWMALESILH-RIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEIPDLLEKGER------ 229 (279)
T ss_pred ccccCcccceecCCCcccccccCHHHhhc-CCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhCCCC------
Confidence 7654322211 12223567999999875 678999999999999999998 9999988766554444332211
Q ss_pred ccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhc
Q 035861 242 WPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALN 305 (332)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 305 (332)
...+...+..+.+++.+||..+|.+||++.++++
T Consensus 230 ------------------------------~~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~ 263 (279)
T cd05057 230 ------------------------------LPQPPICTIDVYMVLVKCWMIDAESRPTFKELIN 263 (279)
T ss_pred ------------------------------CCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 1112225778899999999999999999998865
No 328
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=1.3e-39 Score=282.08 Aligned_cols=258 Identities=24% Similarity=0.350 Sum_probs=197.2
Q ss_pred hhcccccccccccCcEEEEEEEECCCC----------------cEEEEEEeecccCCcccccccCCCcchhHHHHHHhhC
Q 035861 10 VFEFEKLNKISEGTYGIVYRARDKKSG----------------EIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSF 73 (332)
Q Consensus 10 ~~~y~~~~~lg~g~~g~v~~~~~~~~~----------------~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l 73 (332)
..+|++++.||+|+||.||++.+..++ ..||+|.+........ ...+.+|+..++++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~-------~~~~~~e~~~l~~l 76 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNA-------REDFLKEVKILSRL 76 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHH-------HHHHHHHHHHHHhc
Confidence 458999999999999999999876533 4578998865432211 12456899999999
Q ss_pred CCCCeeeeeeeEEcCCCeEEEEccccccc-HHHHHHhcC----------CCCCHHHHHHHHHHHHHHHHHHHHCCccccc
Q 035861 74 DHPSIVNVKEVVMDDHDSVYMVMEYMEHD-LKWLMESMK----------QPFSTSEVKCLMLQLLEGVKYLHDNWVLHRD 142 (332)
Q Consensus 74 ~h~~i~~~~~~~~~~~~~~~lv~e~~~~~-l~~~~~~~~----------~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~d 142 (332)
+|+|++++++.+..+ ...++++|+++++ +...+.... ..+++..++.++.|++.||+|||++|++|+|
T Consensus 77 ~~~~i~~~~~~~~~~-~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~d 155 (296)
T cd05051 77 SDPNIARLLGVCTVD-PPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRD 155 (296)
T ss_pred CCCCEeEEEEEEecC-CCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCccccc
Confidence 999999999998555 7889999999864 444443322 2689999999999999999999999999999
Q ss_pred CCCCCEEEcCCCcEEEeecccccccCCCC--CCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHh--CCCCC
Q 035861 143 LKTSNLLLNNQGVLKICDFGMSRQYGSPL--KPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA--KKPLF 218 (332)
Q Consensus 143 i~p~Nili~~~~~~~l~df~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~llt--g~~pf 218 (332)
|||+||+++.++.++|+|||.+....... .......++..|+|||.+.. ..++.++|+||||+++|++++ +..||
T Consensus 156 lkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~~~~~~p~ 234 (296)
T cd05051 156 LATRNCLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLL-GKFTTKSDVWAFGVTLWEILTLCREQPY 234 (296)
T ss_pred cchhceeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhc-CCCCccchhhhhHHHHHHHHhcCCCCCC
Confidence 99999999999999999999987543221 11223345678999999876 568999999999999999998 77888
Q ss_pred CCCChHHHHHHHHHHcCCCCCCcccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCC
Q 035861 219 SGTTEVDQIDKIFKTLGTPTETIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRI 298 (332)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp 298 (332)
...+..+............. ........+.++.++.+|+.+||+.||++||
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~-----------------------------~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp 285 (296)
T cd05051 235 EHLTDQQVIENAGHFFRDDG-----------------------------RQIYLPRPPNCPKDIYELMLECWRRDEEDRP 285 (296)
T ss_pred CCcChHHHHHHHHhcccccc-----------------------------ccccCCCccCCCHHHHHHHHHHhccChhcCC
Confidence 77665555444432110000 0000111233678999999999999999999
Q ss_pred CHHHHhc
Q 035861 299 TVDDALN 305 (332)
Q Consensus 299 s~~ell~ 305 (332)
++.+|++
T Consensus 286 t~~el~~ 292 (296)
T cd05051 286 TFREIHL 292 (296)
T ss_pred CHHHHHH
Confidence 9999965
No 329
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=2.8e-39 Score=273.17 Aligned_cols=244 Identities=27% Similarity=0.444 Sum_probs=191.5
Q ss_pred ccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCCeEEEEc
Q 035861 17 NKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHDSVYMVM 96 (332)
Q Consensus 17 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~lv~ 96 (332)
+.||+|++|.||+|... ++..+|+|++........ ...+.+|+..++.+.||||+++++.+... ...++||
T Consensus 1 ~~ig~g~~g~vy~~~~~-~~~~~a~K~~~~~~~~~~-------~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-~~~~lv~ 71 (250)
T cd05085 1 ELLGKGNFGEVFKGTLK-DKTPVAVKTCKEDLPQEL-------KIKFLSEARILKQYDHPNIVKLIGVCTQR-QPIYIVM 71 (250)
T ss_pred CccCCCCCceEEEEEec-CCcEEEEEecCCcCCHHH-------HHHHHHHHHHHHhCCCCCcCeEEEEEecC-CccEEEE
Confidence 46899999999999864 578899998864332110 11466899999999999999999998544 7789999
Q ss_pred ccccc-cHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCCCCCCC-
Q 035861 97 EYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPY- 174 (332)
Q Consensus 97 e~~~~-~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~~~~~~- 174 (332)
||+++ ++.+.+......+++..+..++.|++.||.+||++|++|+||+|+||+++.++.++|+|||.+..........
T Consensus 72 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~ 151 (250)
T cd05085 72 ELVPGGDFLSFLRKKKDELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSS 151 (250)
T ss_pred ECCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEEcCCCeEEECCCccceeccccccccC
Confidence 99986 4555555445678999999999999999999999999999999999999999999999999887543221111
Q ss_pred ccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCCccccc
Q 035861 175 TSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA-KKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGAKA 253 (332)
Q Consensus 175 ~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (332)
....++..|+|||.+.+ ..++.++|+||||+++|++++ |..||...........+.....
T Consensus 152 ~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~~~~~~~------------------ 212 (250)
T cd05085 152 GLKQIPIKWTAPEALNY-GRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVEKGYR------------------ 212 (250)
T ss_pred CCCCCcccccCHHHhcc-CCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCCC------------------
Confidence 12233567999999876 678999999999999999998 9999987766554444322110
Q ss_pred cccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcC
Q 035861 254 NFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNH 306 (332)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 306 (332)
...+..++..+.+++.+||+.+|++||++.++++.
T Consensus 213 ------------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~ 247 (250)
T cd05085 213 ------------------MSCPQKCPDDVYKVMQRCWDYKPENRPKFSELQKE 247 (250)
T ss_pred ------------------CCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHH
Confidence 01122368899999999999999999999999763
No 330
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=3e-40 Score=308.83 Aligned_cols=262 Identities=31% Similarity=0.470 Sum_probs=202.9
Q ss_pred ccchhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEE
Q 035861 7 CRSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVM 86 (332)
Q Consensus 7 ~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~ 86 (332)
++...+|+.+..||+||||.||+++++-+|+.||||++.... ..... ..+.+|+..+.+|+||||+.++..++
T Consensus 475 SRY~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~-s~~~~------skI~rEVk~LArLnHpNVVRYysAWV 547 (1351)
T KOG1035|consen 475 SRYLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKA-SDKLY------SKILREVKLLARLNHPNVVRYYSAWV 547 (1351)
T ss_pred hhHhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCch-HHHHH------HHHHHHHHHHhhcCCcceeeeehhhh
Confidence 467889999999999999999999999999999999998765 22222 25789999999999999999987653
Q ss_pred cC------------------------------------------------------C-----------------------
Q 035861 87 DD------------------------------------------------------H----------------------- 89 (332)
Q Consensus 87 ~~------------------------------------------------------~----------------------- 89 (332)
++ .
T Consensus 548 Es~~~~~~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg 627 (1351)
T KOG1035|consen 548 ESTAELTVLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDG 627 (1351)
T ss_pred ccCCccccccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccc
Confidence 21 0
Q ss_pred -----------------------------------------CeEEEEcccccccHHHHHHhcCCCC-CHHHHHHHHHHHH
Q 035861 90 -----------------------------------------DSVYMVMEYMEHDLKWLMESMKQPF-STSEVKCLMLQLL 127 (332)
Q Consensus 90 -----------------------------------------~~~~lv~e~~~~~l~~~~~~~~~~l-~~~~~~~i~~~l~ 127 (332)
..+||=||||+.+++..+..++... ....+|+++++|+
T Consensus 628 ~~~S~tS~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIl 707 (1351)
T KOG1035|consen 628 RNLSNTSDSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREIL 707 (1351)
T ss_pred cccccccccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHH
Confidence 1247788999998888888766555 5888999999999
Q ss_pred HHHHHHHHCCcccccCCCCCEEEcCCCcEEEeeccccccc------------------CCCCCCCccccccccccchhhh
Q 035861 128 EGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQY------------------GSPLKPYTSLVVTLWYRAPELL 189 (332)
Q Consensus 128 ~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~------------------~~~~~~~~~~~~~~~y~aPE~~ 189 (332)
.||+|+|+.||+||||||.|||++.++.|||+|||+++.. +.+....+...||..|+|||.+
T Consensus 708 EGLaYIH~~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll 787 (1351)
T KOG1035|consen 708 EGLAYIHDQGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELL 787 (1351)
T ss_pred HHHHHHHhCceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHh
Confidence 9999999999999999999999999999999999998762 1122234567899999999999
Q ss_pred cCCC--CCCchhHHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHHHcCCCCCCcccCCCCCccccccccCCchhhhhhh
Q 035861 190 LGAK--KYSTAVDMWSVGCIMAELLAKKPLFSGTTEV-DQIDKIFKTLGTPTETIWPGLSELPGAKANFAKQPYNLLRKR 266 (332)
Q Consensus 190 ~~~~--~~~~~sDi~slG~~l~~lltg~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (332)
.+.. .|+.+.|+||||++++||+ .||...-.. ..+..+.+..- +.+ +++
T Consensus 788 ~~~~~~~Yn~KiDmYSLGIVlFEM~---yPF~TsMERa~iL~~LR~g~i--P~~--~~f--------------------- 839 (1351)
T KOG1035|consen 788 SDTSSNKYNSKIDMYSLGIVLFEML---YPFGTSMERASILTNLRKGSI--PEP--ADF--------------------- 839 (1351)
T ss_pred cccccccccchhhhHHHHHHHHHHh---ccCCchHHHHHHHHhcccCCC--CCC--ccc---------------------
Confidence 7755 6999999999999999998 556543211 22222221111 100 000
Q ss_pred CCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCC
Q 035861 267 FPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHE 311 (332)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~ 311 (332)
..+ --+.-..+|++|++.||.+||||.|+|++.||.-
T Consensus 840 -------~~~-~~~~e~slI~~Ll~hdP~kRPtA~eLL~s~llpp 876 (1351)
T KOG1035|consen 840 -------FDP-EHPEEASLIRWLLSHDPSKRPTATELLNSELLPP 876 (1351)
T ss_pred -------ccc-cchHHHHHHHHHhcCCCccCCCHHHHhhccCCCc
Confidence 001 1223348999999999999999999999999973
No 331
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=1.8e-39 Score=280.46 Aligned_cols=249 Identities=22% Similarity=0.371 Sum_probs=191.6
Q ss_pred cccccccccccCcEEEEEEEECC-----CCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEE
Q 035861 12 EFEKLNKISEGTYGIVYRARDKK-----SGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVM 86 (332)
Q Consensus 12 ~y~~~~~lg~g~~g~v~~~~~~~-----~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~ 86 (332)
+|++.+.||+|+||.||+|.... ....+++|.+........ ...+..|+..++.+.||||+++++.+.
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~-------~~~~~~E~~~l~~l~h~~iv~~~~~~~ 73 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSE-------LRDLLSEFNLLKQVNHPHVIKLYGACS 73 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHH-------HHHHHHHHHHHhhCCCCCEeeEEEEEe
Confidence 58899999999999999998753 235688887764332111 124568999999999999999999884
Q ss_pred cCCCeEEEEccccccc-HHHHHHhc-----------------------CCCCCHHHHHHHHHHHHHHHHHHHHCCccccc
Q 035861 87 DDHDSVYMVMEYMEHD-LKWLMESM-----------------------KQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRD 142 (332)
Q Consensus 87 ~~~~~~~lv~e~~~~~-l~~~~~~~-----------------------~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~d 142 (332)
. ....++++||+.++ +.+.+... ...+++..++.++.|++.||++||++|++|+|
T Consensus 74 ~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~d 152 (290)
T cd05045 74 Q-DGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRD 152 (290)
T ss_pred c-CCCcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeehhh
Confidence 4 47789999999964 44443321 13478899999999999999999999999999
Q ss_pred CCCCCEEEcCCCcEEEeecccccccCCCCC--CCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHh-CCCCCC
Q 035861 143 LKTSNLLLNNQGVLKICDFGMSRQYGSPLK--PYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA-KKPLFS 219 (332)
Q Consensus 143 i~p~Nili~~~~~~~l~df~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~llt-g~~pf~ 219 (332)
|+|+||+++.++.++|+|||.+........ ......++..|+|||.+.+ ..++.++|+||||+++|+|++ |..||.
T Consensus 153 ikp~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~-~~~~~~~Di~slG~~l~el~t~g~~p~~ 231 (290)
T cd05045 153 LAARNVLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFD-HIYTTQSDVWSFGVLLWEIVTLGGNPYP 231 (290)
T ss_pred hhhheEEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHcc-CCcchHhHHHHHHHHHHHHHhcCCCCCC
Confidence 999999999999999999999875432211 1122345668999999876 668999999999999999998 999998
Q ss_pred CCChHHHHHHHHHHcCCCCCCcccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCC
Q 035861 220 GTTEVDQIDKIFKTLGTPTETIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRIT 299 (332)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps 299 (332)
............... ....+..++.++.+++.+||+.+|++||+
T Consensus 232 ~~~~~~~~~~~~~~~------------------------------------~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~ 275 (290)
T cd05045 232 GIAPERLFNLLKTGY------------------------------------RMERPENCSEEMYNLMLTCWKQEPDKRPT 275 (290)
T ss_pred CCCHHHHHHHHhCCC------------------------------------CCCCCCCCCHHHHHHHHHHccCCcccCCC
Confidence 766554443322111 01112236889999999999999999999
Q ss_pred HHHHhc
Q 035861 300 VDDALN 305 (332)
Q Consensus 300 ~~ell~ 305 (332)
+.++++
T Consensus 276 ~~~i~~ 281 (290)
T cd05045 276 FADISK 281 (290)
T ss_pred HHHHHH
Confidence 999975
No 332
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=1.6e-39 Score=281.43 Aligned_cols=257 Identities=26% Similarity=0.403 Sum_probs=193.3
Q ss_pred hcccccccccccCcEEEEEEEECCC--------------CcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCC
Q 035861 11 FEFEKLNKISEGTYGIVYRARDKKS--------------GEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHP 76 (332)
Q Consensus 11 ~~y~~~~~lg~g~~g~v~~~~~~~~--------------~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~ 76 (332)
.+|++.+.||+|+||.||++.+..+ ...||+|.+........ ...+.+|++.+++++|+
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~-------~~~~~~ei~~l~~l~h~ 77 (295)
T cd05097 5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTA-------RNDFLKEIKIMSRLKNP 77 (295)
T ss_pred HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHH-------HHHHHHHHHHHHhCCCC
Confidence 4899999999999999999987543 23589998865322111 11466899999999999
Q ss_pred CeeeeeeeEEcCCCeEEEEccccccc-HHHHHHhcC-----------CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCC
Q 035861 77 SIVNVKEVVMDDHDSVYMVMEYMEHD-LKWLMESMK-----------QPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLK 144 (332)
Q Consensus 77 ~i~~~~~~~~~~~~~~~lv~e~~~~~-l~~~~~~~~-----------~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~ 144 (332)
|++++++.+..+ ...++||||+.++ +.+.+.... ..+++..++.++.|++.||+|||++|++|+|||
T Consensus 78 ~i~~~~~~~~~~-~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlk 156 (295)
T cd05097 78 NIIRLLGVCVSD-DPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLA 156 (295)
T ss_pred CcCeEEEEEcCC-CccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccccC
Confidence 999999999544 7789999999875 444333211 236888999999999999999999999999999
Q ss_pred CCCEEEcCCCcEEEeecccccccCCCC--CCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHh--CCCCCCC
Q 035861 145 TSNLLLNNQGVLKICDFGMSRQYGSPL--KPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA--KKPLFSG 220 (332)
Q Consensus 145 p~Nili~~~~~~~l~df~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~llt--g~~pf~~ 220 (332)
|+||+++.++.++|+|||.+....... .......++..|+|||.+.. ..++.++|+||||+++|+|++ +..||..
T Consensus 157 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwSlG~~l~el~~~~~~~p~~~ 235 (295)
T cd05097 157 TRNCLVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILL-GKFTTASDVWAFGVTLWEMFTLCKEQPYSL 235 (295)
T ss_pred hhhEEEcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhcc-CCcCchhhHHHHHHHHHHHHHcCCCCCCcc
Confidence 999999999999999999987542211 11122344678999999876 568999999999999999988 6778877
Q ss_pred CChHHHHHHHHHHcCCCCCCcccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCH
Q 035861 221 TTEVDQIDKIFKTLGTPTETIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITV 300 (332)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~ 300 (332)
.+..+.............. ......++.+++.+.+|+.+||+.||++||++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~-----------------------------~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~ 286 (295)
T cd05097 236 LSDEQVIENTGEFFRNQGR-----------------------------QIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTF 286 (295)
T ss_pred cChHHHHHHHHHhhhhccc-----------------------------cccCCCCCCCCHHHHHHHHHHcCCCchhCcCH
Confidence 6655544433221100000 00011223368899999999999999999999
Q ss_pred HHHhc
Q 035861 301 DDALN 305 (332)
Q Consensus 301 ~ell~ 305 (332)
.+|++
T Consensus 287 ~~i~~ 291 (295)
T cd05097 287 NKIHH 291 (295)
T ss_pred HHHHH
Confidence 99975
No 333
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=2.9e-39 Score=278.29 Aligned_cols=267 Identities=23% Similarity=0.384 Sum_probs=194.6
Q ss_pred hcccccccccccCcEEEEEEEE----CCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEE
Q 035861 11 FEFEKLNKISEGTYGIVYRARD----KKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVM 86 (332)
Q Consensus 11 ~~y~~~~~lg~g~~g~v~~~~~----~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~ 86 (332)
.+|++++.||+|+||+||++.. ..++..|++|.+....... ...+.+|+.++++++|||++++++++.
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~--------~~~~~~e~~~l~~l~h~~iv~~~~~~~ 75 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEH--------LRDFEREIEILKSLQHDNIVKYKGVCY 75 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHH--------HHHHHHHHHHHHhCCCCCeeEEEEEEc
Confidence 4789999999999999999974 4578899999986432111 114568999999999999999999874
Q ss_pred c-CCCeEEEEcccccc-cHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccc
Q 035861 87 D-DHDSVYMVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMS 164 (332)
Q Consensus 87 ~-~~~~~~lv~e~~~~-~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~ 164 (332)
. +....++|+||+++ ++.+.+......+++..+..++.|++.||+|||++|++|+||||+||+++.++.++|+|||.+
T Consensus 76 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili~~~~~~~l~dfg~~ 155 (284)
T cd05081 76 SAGRRNLRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILVESENRVKIGDFGLT 155 (284)
T ss_pred cCCCCceEEEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEECCCCeEEECCCccc
Confidence 3 34568999999985 555555554567999999999999999999999999999999999999999999999999998
Q ss_pred cccCCCCCC---CccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCc
Q 035861 165 RQYGSPLKP---YTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETI 241 (332)
Q Consensus 165 ~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 241 (332)
......... .....++..|+|||.+.+ ..++.++|+||||+++|+|++|..++...... ....+ ......
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~-~~~~~----~~~~~~- 228 (284)
T cd05081 156 KVLPQDKEYYKVREPGESPIFWYAPESLTE-SKFSVASDVWSFGVVLYELFTYSDKSCSPPAE-FMRMM----GNDKQG- 228 (284)
T ss_pred ccccCCCcceeecCCCCCceEeeCHHHhcc-CCcChHHHHHHHHHHHHHHhhcCCcCCCcchh-hhhhc----cccccc-
Confidence 865332211 111223456999999876 67899999999999999999988776443221 10000 000000
Q ss_pred ccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcC
Q 035861 242 WPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNH 306 (332)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 306 (332)
......................++..+.+|+.+||+.+|++|||+.+|++.
T Consensus 229 --------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~ 279 (284)
T cd05081 229 --------------QMIVYHLIELLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQ 279 (284)
T ss_pred --------------ccchHHHHHHHhcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHH
Confidence 000000000000111122334578899999999999999999999999863
No 334
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=2.6e-39 Score=275.30 Aligned_cols=246 Identities=23% Similarity=0.375 Sum_probs=187.2
Q ss_pred ccccccCcEEEEEEEECC---CCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCCeEE
Q 035861 17 NKISEGTYGIVYRARDKK---SGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHDSVY 93 (332)
Q Consensus 17 ~~lg~g~~g~v~~~~~~~---~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 93 (332)
+.||+|+||+||+|.+.. +...+|+|.+........ ...+..|+..++.++|||++++++.+...+...+
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~-------~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 73 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEE-------VEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPL 73 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHH-------HHHHHHHHHHHccCCCCCcceEEEEeecCCCCcE
Confidence 468999999999998643 345799998753221110 1245689999999999999999998766666788
Q ss_pred EEcccccc-cHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCCCC-
Q 035861 94 MVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPL- 171 (332)
Q Consensus 94 lv~e~~~~-~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~~~- 171 (332)
+++||+.+ ++.+.+......+++..+..++.|++.||+|||+.|++|+||+|+||+++.++.++|+|||.+.......
T Consensus 74 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~ 153 (262)
T cd05058 74 VVLPYMKHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEY 153 (262)
T ss_pred EEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCccccccccCCcc
Confidence 99999985 5555555545567888889999999999999999999999999999999999999999999987543211
Q ss_pred ---CCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhC-CCCCCCCChHHHHHHHHHHcCCCCCCcccCCCC
Q 035861 172 ---KPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAK-KPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSE 247 (332)
Q Consensus 172 ---~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (332)
.......++..|+|||.+.. ..++.++|+||||+++|+|++| ..||...+..+....+.....
T Consensus 154 ~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~------------ 220 (262)
T cd05058 154 YSVHNHTGAKLPVKWMALESLQT-QKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVYLLQGRR------------ 220 (262)
T ss_pred eeecccccCcCCccccChhHhcc-CccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCCC------------
Confidence 11123345668999999876 6789999999999999999995 556665555444333322110
Q ss_pred CccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcC
Q 035861 248 LPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNH 306 (332)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 306 (332)
...+..++..+.+++.+||+.+|++||++.++++.
T Consensus 221 ------------------------~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~ 255 (262)
T cd05058 221 ------------------------LLQPEYCPDPLYEVMLSCWHPKPEMRPTFSELVSR 255 (262)
T ss_pred ------------------------CCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence 00112257789999999999999999999999864
No 335
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=1.8e-39 Score=276.14 Aligned_cols=239 Identities=21% Similarity=0.270 Sum_probs=183.4
Q ss_pred ccccccCcEEEEEEEECCC------------CcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeee
Q 035861 17 NKISEGTYGIVYRARDKKS------------GEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEV 84 (332)
Q Consensus 17 ~~lg~g~~g~v~~~~~~~~------------~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~ 84 (332)
+.||.|++|+||+|+...+ ...+++|++...... ....+.+|+..++.++||||++++++
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~--------~~~~~~~~~~~l~~l~hp~iv~~~~~ 72 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRD--------ISLAFFETASMMRQVSHKHIVLLYGV 72 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhh--------HHHHHHHHHHHHHhCCCCCEeeEEEE
Confidence 4689999999999986432 235888886543211 11245688899999999999999999
Q ss_pred EEcCCCeEEEEcccccccHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCc-------E
Q 035861 85 VMDDHDSVYMVMEYMEHDLKWLMES-MKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGV-------L 156 (332)
Q Consensus 85 ~~~~~~~~~lv~e~~~~~l~~~~~~-~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~-------~ 156 (332)
+..+ ...+++|||++++.++.... ....+++..++.++.||+.||+|||++|++|+||+|+||+++.++. +
T Consensus 73 ~~~~-~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~~~ 151 (262)
T cd05077 73 CVRD-VENIMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDGECGPFI 151 (262)
T ss_pred EecC-CCCEEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCccCCCCcee
Confidence 8554 67889999999765555444 3567999999999999999999999999999999999999987664 8
Q ss_pred EEeecccccccCCCCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHH-hCCCCCCCCChHHHHHHHHHHcC
Q 035861 157 KICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELL-AKKPLFSGTTEVDQIDKIFKTLG 235 (332)
Q Consensus 157 ~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~ll-tg~~pf~~~~~~~~~~~~~~~~~ 235 (332)
+++|||.+..... .....++..|+|||.+.....++.++||||||+++|+|+ +|..||......+. .......
T Consensus 152 ~l~d~g~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~-~~~~~~~- 225 (262)
T cd05077 152 KLSDPGIPITVLS----RQECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEK-ERFYEGQ- 225 (262)
T ss_pred EeCCCCCCccccC----cccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHH-HHHHhcC-
Confidence 9999998865432 123456788999999876577899999999999999998 58888766543322 1111100
Q ss_pred CCCCCcccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcC
Q 035861 236 TPTETIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNH 306 (332)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 306 (332)
.......+.++.+||.+||+.||.+||++.+|+++
T Consensus 226 ------------------------------------~~~~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~ 260 (262)
T cd05077 226 ------------------------------------CMLVTPSCKELADLMTHCMNYDPNQRPFFRAIMRD 260 (262)
T ss_pred ------------------------------------ccCCCCChHHHHHHHHHHcCCChhhCcCHHHHHHh
Confidence 00011145678899999999999999999999875
No 336
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=1.4e-39 Score=278.58 Aligned_cols=238 Identities=22% Similarity=0.277 Sum_probs=182.8
Q ss_pred cccccCcEEEEEEEECCC------------------------CcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhC
Q 035861 18 KISEGTYGIVYRARDKKS------------------------GEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSF 73 (332)
Q Consensus 18 ~lg~g~~g~v~~~~~~~~------------------------~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l 73 (332)
+||+|+||.||+|....+ ...|++|++....... ...+.+|+.+++.+
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~--------~~~~~~~~~~~~~l 73 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDI--------ALAFFETASLMSQV 73 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHH--------HHHHHHHHHHHhcC
Confidence 699999999999985321 2357888875432111 12456888999999
Q ss_pred CCCCeeeeeeeEEcCCCeEEEEcccccccHHHHHH-hcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcC
Q 035861 74 DHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLME-SMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNN 152 (332)
Q Consensus 74 ~h~~i~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~-~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~ 152 (332)
+||||+++++++.++ ...++||||++++.++.+. ...+.+++..+..++.|++.||+|||++|++|+||||+||+++.
T Consensus 74 ~h~niv~~~~~~~~~-~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~ 152 (274)
T cd05076 74 SHIHLAFVHGVCVRG-SENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLAR 152 (274)
T ss_pred CCCCeeeEEEEEEeC-CceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEec
Confidence 999999999998555 6789999999987655554 34567899999999999999999999999999999999999986
Q ss_pred CC-------cEEEeecccccccCCCCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHH-hCCCCCCCCChH
Q 035861 153 QG-------VLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELL-AKKPLFSGTTEV 224 (332)
Q Consensus 153 ~~-------~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~ll-tg~~pf~~~~~~ 224 (332)
.+ .++++|||.+...... ....++..|+|||.+.+...++.++|+||||+++|+++ +|..||......
T Consensus 153 ~~~~~~~~~~~kl~d~g~~~~~~~~----~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~ 228 (274)
T cd05076 153 LGLAEGTSPFIKLSDPGVSFTALSR----EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPS 228 (274)
T ss_pred cCcccCccceeeecCCccccccccc----cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChH
Confidence 44 4899999987543221 23356778999999876567899999999999999985 689999766544
Q ss_pred HHHHHHHHHcCCCCCCcccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHh
Q 035861 225 DQIDKIFKTLGTPTETIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDAL 304 (332)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell 304 (332)
+... ........ +...++.+.++|.+||+.+|++||++.++|
T Consensus 229 ~~~~-~~~~~~~~-------------------------------------~~~~~~~~~~li~~cl~~~p~~Rps~~~il 270 (274)
T cd05076 229 EKER-FYEKKHRL-------------------------------------PEPSCKELATLISQCLTYEPTQRPSFRTIL 270 (274)
T ss_pred HHHH-HHHhccCC-------------------------------------CCCCChHHHHHHHHHcccChhhCcCHHHHH
Confidence 3222 11110000 111456789999999999999999999998
Q ss_pred cC
Q 035861 305 NH 306 (332)
Q Consensus 305 ~h 306 (332)
++
T Consensus 271 ~~ 272 (274)
T cd05076 271 RD 272 (274)
T ss_pred Hh
Confidence 75
No 337
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-40 Score=292.42 Aligned_cols=254 Identities=24% Similarity=0.366 Sum_probs=205.2
Q ss_pred hhcccccccccccCcEEEEEEEECCCC----cEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeE
Q 035861 10 VFEFEKLNKISEGTYGIVYRARDKKSG----EIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVV 85 (332)
Q Consensus 10 ~~~y~~~~~lg~g~~g~v~~~~~~~~~----~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~ 85 (332)
+++..+.++||+|+||.||+|.....+ ..||||........... ....++.|++++++++||||+.++|+.
T Consensus 156 H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~-----~~~e~m~EArvMr~l~H~NVVr~yGVa 230 (474)
T KOG0194|consen 156 HSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKE-----QIKEFMKEARVMRQLNHPNVVRFYGVA 230 (474)
T ss_pred ccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHH-----HHHHHHHHHHHHHhCCCCCEEEEEEEE
Confidence 457778899999999999999987542 23899988752211111 123578999999999999999999999
Q ss_pred EcCCCeEEEEcccccc-cHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccc
Q 035861 86 MDDHDSVYMVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMS 164 (332)
Q Consensus 86 ~~~~~~~~lv~e~~~~-~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~ 164 (332)
... .-+++|||+|.| +|.+.+....+.++..+...++.+.+.||+|||+++++||||-..|+|++.++.+||+|||++
T Consensus 231 ~~~-~Pl~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~~~~~~vKISDFGLs 309 (474)
T KOG0194|consen 231 VLE-EPLMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLYSKKGVVKISDFGLS 309 (474)
T ss_pred cCC-CccEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHheecCCCeEEeCccccc
Confidence 555 778999999997 566666665567999999999999999999999999999999999999999999999999998
Q ss_pred cccCCCCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHH-HcCCCCCCcc
Q 035861 165 RQYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA-KKPLFSGTTEVDQIDKIFK-TLGTPTETIW 242 (332)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~llt-g~~pf~~~~~~~~~~~~~~-~~~~~~~~~~ 242 (332)
+....-........-+..|+|||.+.. ..++.++||||+|+++||+++ |..||.+.+..+...++.. ....+.
T Consensus 310 ~~~~~~~~~~~~~klPirWLAPEtl~~-~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~kI~~~~~r~~~---- 384 (474)
T KOG0194|consen 310 RAGSQYVMKKFLKKLPIRWLAPETLNT-GIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAKIVKNGYRMPI---- 384 (474)
T ss_pred cCCcceeeccccccCcceecChhhhcc-CccccccchhheeeeEEeeeccCCCCCCCCCHHHHHHHHHhcCccCCC----
Confidence 765311111112235678999999988 589999999999999999998 8899999999988888844 222221
Q ss_pred cCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcC
Q 035861 243 PGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNH 306 (332)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 306 (332)
+...+..+..++.+|+..+|++||++.++.+-
T Consensus 385 --------------------------------~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~ 416 (474)
T KOG0194|consen 385 --------------------------------PSKTPKELAKVMKQCWKKDPEDRPTMSTIKKK 416 (474)
T ss_pred --------------------------------CCCCHHHHHHHHHHhccCChhhccCHHHHHHH
Confidence 12257788899999999999999999888653
No 338
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=2.5e-39 Score=282.55 Aligned_cols=252 Identities=22% Similarity=0.355 Sum_probs=194.3
Q ss_pred hhcccccccccccCcEEEEEEEECC-------CCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhC-CCCCeeee
Q 035861 10 VFEFEKLNKISEGTYGIVYRARDKK-------SGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSF-DHPSIVNV 81 (332)
Q Consensus 10 ~~~y~~~~~lg~g~~g~v~~~~~~~-------~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~ 81 (332)
..+|.+.+.||+|++|.||++++.. ....+|+|.+........ ...+..|+..++++ .||||+++
T Consensus 11 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~-------~~~~~~E~~~l~~l~~h~~iv~~ 83 (314)
T cd05099 11 RDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKD-------LADLISEMELMKLIGKHKNIINL 83 (314)
T ss_pred HHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHH-------HHHHHHHHHHHHhccCCCCeeeE
Confidence 3589999999999999999998632 345689998764322111 11356899999999 69999999
Q ss_pred eeeEEcCCCeEEEEccccccc-HHHHHHhc---------------CCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCC
Q 035861 82 KEVVMDDHDSVYMVMEYMEHD-LKWLMESM---------------KQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKT 145 (332)
Q Consensus 82 ~~~~~~~~~~~~lv~e~~~~~-l~~~~~~~---------------~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p 145 (332)
++++. .....++++||++++ +.+.+... ...+++..+..++.||+.||.|||++|++|+||||
T Consensus 84 ~~~~~-~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp 162 (314)
T cd05099 84 LGVCT-QEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAA 162 (314)
T ss_pred EEEEc-cCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeeccccc
Confidence 99884 447789999999864 44444332 13488999999999999999999999999999999
Q ss_pred CCEEEcCCCcEEEeecccccccCCCCCC--CccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCC
Q 035861 146 SNLLLNNQGVLKICDFGMSRQYGSPLKP--YTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA-KKPLFSGTT 222 (332)
Q Consensus 146 ~Nili~~~~~~~l~df~~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~llt-g~~pf~~~~ 222 (332)
+||+++.++.++|+|||.++........ .....++..|+|||.+.+ ..++.++|+||||+++|++++ |..||...+
T Consensus 163 ~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DiwslG~~l~el~~~g~~p~~~~~ 241 (314)
T cd05099 163 RNVLVTEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFD-RVYTHQSDVWSFGILMWEIFTLGGSPYPGIP 241 (314)
T ss_pred eeEEEcCCCcEEEccccccccccccccccccccCCCCccccCHHHHcc-CCcCccchhhHHHHHHHHHHhCCCCCCCCCC
Confidence 9999999999999999999765321111 112233457999999876 678999999999999999999 889998776
Q ss_pred hHHHHHHHHHHcCCCCCCcccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHH
Q 035861 223 EVDQIDKIFKTLGTPTETIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDD 302 (332)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e 302 (332)
..+....+..... ...+..++.++++|+.+||+.+|++||++.+
T Consensus 242 ~~~~~~~~~~~~~------------------------------------~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ 285 (314)
T cd05099 242 VEELFKLLREGHR------------------------------------MDKPSNCTHELYMLMRECWHAVPTQRPTFKQ 285 (314)
T ss_pred HHHHHHHHHcCCC------------------------------------CCCCCCCCHHHHHHHHHHcCCCcccCcCHHH
Confidence 6555544432110 0112236788999999999999999999999
Q ss_pred HhcC
Q 035861 303 ALNH 306 (332)
Q Consensus 303 ll~h 306 (332)
+++.
T Consensus 286 ll~~ 289 (314)
T cd05099 286 LVEA 289 (314)
T ss_pred HHHH
Confidence 9863
No 339
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=2.5e-39 Score=274.52 Aligned_cols=248 Identities=27% Similarity=0.427 Sum_probs=197.5
Q ss_pred ccccccccccCcEEEEEEEECCCC----cEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcC
Q 035861 13 FEKLNKISEGTYGIVYRARDKKSG----EIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDD 88 (332)
Q Consensus 13 y~~~~~lg~g~~g~v~~~~~~~~~----~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 88 (332)
+++++.||.|+||.||++++..++ ..+|+|++........ ...+..|+..++.++|+|++++++.+.+.
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~-------~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 73 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQ-------IEEFLREARIMRKLDHPNIVKLLGVCTEE 73 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHH-------HHHHHHHHHHHHhcCCCchheEEEEEcCC
Confidence 467899999999999999998766 8899999865432211 12466899999999999999999998555
Q ss_pred CCeEEEEccccccc-HHHHHHhcCCC-CCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccc
Q 035861 89 HDSVYMVMEYMEHD-LKWLMESMKQP-FSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQ 166 (332)
Q Consensus 89 ~~~~~lv~e~~~~~-l~~~~~~~~~~-l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~ 166 (332)
...+++||+++++ +.+.+...... +++..+..++.|++.||++||+.|++|+||+|+||+++.++.++|+|||.+..
T Consensus 74 -~~~~~i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~ 152 (258)
T smart00219 74 -EPLMIVMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVGENLVVKISDFGLSRD 152 (258)
T ss_pred -CeeEEEEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEEccCCeEEEcccCCcee
Confidence 7899999999874 44444443333 99999999999999999999999999999999999999999999999999876
Q ss_pred cCCCCCCCc-cccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCCCCCCcccC
Q 035861 167 YGSPLKPYT-SLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA-KKPLFSGTTEVDQIDKIFKTLGTPTETIWPG 244 (332)
Q Consensus 167 ~~~~~~~~~-~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (332)
......... ...++..|+|||.+.+ ..++.++|+||||+++|+|++ |..||...+.......+......
T Consensus 153 ~~~~~~~~~~~~~~~~~y~~Pe~~~~-~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~~~-------- 223 (258)
T smart00219 153 LYDDDYYKKKGGKLPIRWMAPESLKD-GKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEEVLEYLKKGYRL-------- 223 (258)
T ss_pred cccccccccccCCCcccccChHHhcc-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCC--------
Confidence 543211111 2236678999999865 678999999999999999998 78888776665555544332111
Q ss_pred CCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhc
Q 035861 245 LSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALN 305 (332)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 305 (332)
.....++.++.+++.+||..||++|||+.++++
T Consensus 224 ----------------------------~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~ 256 (258)
T smart00219 224 ----------------------------PKPENCPPEIYKLMLQCWAEDPEDRPTFSELVE 256 (258)
T ss_pred ----------------------------CCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHh
Confidence 111226889999999999999999999999986
No 340
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=3.8e-39 Score=275.32 Aligned_cols=257 Identities=26% Similarity=0.476 Sum_probs=199.4
Q ss_pred cccccccccccCcEEEEEEEECC-CCcEEEEEEeecccCCcccc--cccCCCcchhHHHHHHhh-CCCCCeeeeeeeEEc
Q 035861 12 EFEKLNKISEGTYGIVYRARDKK-SGEIVALKKVKMNVGRKEDC--LEYGFPISSLREINILLS-FDHPSIVNVKEVVMD 87 (332)
Q Consensus 12 ~y~~~~~lg~g~~g~v~~~~~~~-~~~~v~iK~~~~~~~~~~~~--~~~~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~ 87 (332)
.|++.+.||+|++|.||+|.+.. +++.+++|.+.......... ........+..|+..+.+ ++|+|++++++.+..
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 48899999999999999999987 67899999986543221100 000111234567777754 699999999999855
Q ss_pred CCCeEEEEccccccc-HHHHH---HhcCCCCCHHHHHHHHHHHHHHHHHHHH-CCcccccCCCCCEEEcCCCcEEEeecc
Q 035861 88 DHDSVYMVMEYMEHD-LKWLM---ESMKQPFSTSEVKCLMLQLLEGVKYLHD-NWVLHRDLKTSNLLLNNQGVLKICDFG 162 (332)
Q Consensus 88 ~~~~~~lv~e~~~~~-l~~~~---~~~~~~l~~~~~~~i~~~l~~~L~~lh~-~~i~H~di~p~Nili~~~~~~~l~df~ 162 (332)
+...+++|||++|+ +.+.+ ......+++..++.++.|++.+|.+||+ .|++|+||+|.||+++.++.++|+|||
T Consensus 81 -~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~~~~~~~l~dfg 159 (269)
T cd08528 81 -NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLGEDDKVTITDFG 159 (269)
T ss_pred -CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEECCCCcEEEeccc
Confidence 47899999999874 43433 2334579999999999999999999996 789999999999999999999999999
Q ss_pred cccccCCCCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcc
Q 035861 163 MSRQYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIW 242 (332)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 242 (332)
.+....... ......++..|+|||.+.+ ..++.++|+||||+++|++++|..||...........+......+.
T Consensus 160 ~~~~~~~~~-~~~~~~~~~~~~~Pe~~~~-~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~---- 233 (269)
T cd08528 160 LAKQKQPES-KLTSVVGTILYSCPEIVKN-EPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLATKIVEAVYEPL---- 233 (269)
T ss_pred ceeeccccc-ccccccCcccCcChhhhcC-CCCchHHHHHHHHHHHHHHHhCCCcccccCHHHHHHHHhhccCCcC----
Confidence 987654332 3345567888999999986 6689999999999999999999999987766555444433211110
Q ss_pred cCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcC
Q 035861 243 PGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNH 306 (332)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 306 (332)
....++..+.++|.+||+.||++||++.|+.++
T Consensus 234 -------------------------------~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~ 266 (269)
T cd08528 234 -------------------------------PEGMYSEDVTDVITSCLTPDAEARPDIIQVSAM 266 (269)
T ss_pred -------------------------------CcccCCHHHHHHHHHHCCCCCccCCCHHHHHHH
Confidence 011267889999999999999999999999764
No 341
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=2.5e-39 Score=276.47 Aligned_cols=252 Identities=27% Similarity=0.418 Sum_probs=197.3
Q ss_pred hhcccccccccccCcEEEEEEEECCCCc---EEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEE
Q 035861 10 VFEFEKLNKISEGTYGIVYRARDKKSGE---IVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVM 86 (332)
Q Consensus 10 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~---~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~ 86 (332)
..+|++.+.||+|++|.||+|....+++ .|++|++....... . ...+..|+..++.+.||||+++++.+
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~--~-----~~~~~~e~~~l~~l~h~ni~~~~~~~- 74 (269)
T cd05065 3 VSCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEK--Q-----RRDFLSEASIMGQFDHPNIIHLEGVV- 74 (269)
T ss_pred hHHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHH--H-----HHHHHHHHHHHHhCCCcCcceEEEEE-
Confidence 4679999999999999999999876654 59999886432111 1 12467899999999999999999998
Q ss_pred cCCCeEEEEccccccc-HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeeccccc
Q 035861 87 DDHDSVYMVMEYMEHD-LKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSR 165 (332)
Q Consensus 87 ~~~~~~~lv~e~~~~~-l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~ 165 (332)
.+....++||||++++ +.+.+....+.+++..++.++.|++.||++||++|++|+||+|+||+++.++.++|+|||.+.
T Consensus 75 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili~~~~~~kl~dfg~~~ 154 (269)
T cd05065 75 TKSRPVMIITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSR 154 (269)
T ss_pred CCCCceEEEEecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEEcCCCcEEECCCcccc
Confidence 4447789999999875 444554445678999999999999999999999999999999999999999999999999886
Q ss_pred ccCCCCCC--Ccccc---ccccccchhhhcCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCCCCC
Q 035861 166 QYGSPLKP--YTSLV---VTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA-KKPLFSGTTEVDQIDKIFKTLGTPTE 239 (332)
Q Consensus 166 ~~~~~~~~--~~~~~---~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~ 239 (332)
........ ..... .+..|+|||.+.. ..++.++|+||||+++|++++ |..||......+....+.....
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~-~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~~~i~~~~~---- 229 (269)
T cd05065 155 FLEDDTSDPTYTSSLGGKIPIRWTAPEAIAY-RKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAIEQDYR---- 229 (269)
T ss_pred ccccCccccccccccCCCcceeecCHhHhcc-CcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCCc----
Confidence 54322111 11111 2357999999876 678999999999999999886 9999987766555444422111
Q ss_pred CcccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcC
Q 035861 240 TIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNH 306 (332)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 306 (332)
......++..+.+++.+||+.+|++||++++|+..
T Consensus 230 --------------------------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~ 264 (269)
T cd05065 230 --------------------------------LPPPMDCPTALHQLMLDCWQKDRNARPKFGQIVST 264 (269)
T ss_pred --------------------------------CCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 11122367889999999999999999999999863
No 342
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=2.4e-39 Score=279.30 Aligned_cols=251 Identities=25% Similarity=0.396 Sum_probs=195.3
Q ss_pred hhcccccccccccCcEEEEEEEECC-----CCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeee
Q 035861 10 VFEFEKLNKISEGTYGIVYRARDKK-----SGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEV 84 (332)
Q Consensus 10 ~~~y~~~~~lg~g~~g~v~~~~~~~-----~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~ 84 (332)
.++|++++.||.|+||.||++.+.. ++..+++|++........ ...+.+|+..++++.|||++++++.
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~-------~~~~~~ei~~l~~l~h~~iv~~~~~ 76 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADM-------QADFQREAALMAEFDHPNIVKLLGV 76 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHH-------HHHHHHHHHHHHhcCCCchheEEEE
Confidence 5689999999999999999998743 678899998864322110 1246689999999999999999998
Q ss_pred EEcCCCeEEEEcccccc-cHHHHHHhcC---------------------CCCCHHHHHHHHHHHHHHHHHHHHCCccccc
Q 035861 85 VMDDHDSVYMVMEYMEH-DLKWLMESMK---------------------QPFSTSEVKCLMLQLLEGVKYLHDNWVLHRD 142 (332)
Q Consensus 85 ~~~~~~~~~lv~e~~~~-~l~~~~~~~~---------------------~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~d 142 (332)
+. .....++++||+++ ++.+.+.... ..+++..++.++.|++.||++||++|++|+|
T Consensus 77 ~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~d 155 (288)
T cd05050 77 CA-VGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRD 155 (288)
T ss_pred Ec-CCCccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeeccc
Confidence 84 44678999999986 5555554321 2478888999999999999999999999999
Q ss_pred CCCCCEEEcCCCcEEEeecccccccCCCC--CCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHh-CCCCCC
Q 035861 143 LKTSNLLLNNQGVLKICDFGMSRQYGSPL--KPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA-KKPLFS 219 (332)
Q Consensus 143 i~p~Nili~~~~~~~l~df~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~llt-g~~pf~ 219 (332)
|+|+||+++.++.++|+|||.+....... ........+..|+|||.+.+ ..++.++|+||||+++|+|++ |..||.
T Consensus 156 l~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~~~~~~p~~ 234 (288)
T cd05050 156 LATRNCLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFY-NRYTTESDVWAYGVVLWEIFSYGMQPYY 234 (288)
T ss_pred ccHhheEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhc-CCCCchhHHHHHHHHHHHHHhCCCCCCC
Confidence 99999999999999999999887543211 11122234567999999876 678999999999999999997 888987
Q ss_pred CCChHHHHHHHHHHcCCCCCCcccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCC
Q 035861 220 GTTEVDQIDKIFKTLGTPTETIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRIT 299 (332)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps 299 (332)
.....+....+..... ......++.++.+|+.+||+.+|++||+
T Consensus 235 ~~~~~~~~~~~~~~~~------------------------------------~~~~~~~~~~l~~li~~~l~~~p~~Rpt 278 (288)
T cd05050 235 GMAHEEVIYYVRDGNV------------------------------------LSCPDNCPLELYNLMRLCWSKLPSDRPS 278 (288)
T ss_pred CCCHHHHHHHHhcCCC------------------------------------CCCCCCCCHHHHHHHHHHcccCcccCCC
Confidence 7666554443322110 0111236788999999999999999999
Q ss_pred HHHHhc
Q 035861 300 VDDALN 305 (332)
Q Consensus 300 ~~ell~ 305 (332)
++|+++
T Consensus 279 ~~el~~ 284 (288)
T cd05050 279 FASINR 284 (288)
T ss_pred HHHHHH
Confidence 999874
No 343
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=2.2e-39 Score=274.43 Aligned_cols=243 Identities=24% Similarity=0.412 Sum_probs=194.2
Q ss_pred chhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcC
Q 035861 9 SVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDD 88 (332)
Q Consensus 9 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 88 (332)
..++|++.+.||+|++|.||++.. +++.+++|.+..... ...+.+|+..+++++|||++++++.+..+
T Consensus 4 ~~~~~~~~~~lg~g~~g~v~~~~~--~~~~~~iK~~~~~~~----------~~~~~~e~~~l~~~~~~~i~~~~~~~~~~ 71 (254)
T cd05083 4 NLQKLTLGEIIGEGEFGAVLQGEY--TGQKVAVKNIKCDVT----------AQAFLEETAVMTKLHHKNLVRLLGVILHN 71 (254)
T ss_pred cHHHceeeeeeccCCCCceEeccc--CCCceEEEeecCcch----------HHHHHHHHHHHHhCCCCCcCeEEEEEcCC
Confidence 357899999999999999999875 488899998854321 12467899999999999999999988543
Q ss_pred CCeEEEEcccccc-cHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccc
Q 035861 89 HDSVYMVMEYMEH-DLKWLMESMK-QPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQ 166 (332)
Q Consensus 89 ~~~~~lv~e~~~~-~l~~~~~~~~-~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~ 166 (332)
..+++|||+.| ++.+.+.... ..+++..+..++.|++.||.+||+.|++|+||+|+||+++.++.++|+|||.+..
T Consensus 72 --~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~ 149 (254)
T cd05083 72 --GLYIVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVSEDGVAKVSDFGLARV 149 (254)
T ss_pred --CcEEEEECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCcEEECCCcccee
Confidence 36899999986 5655555433 3589999999999999999999999999999999999999999999999998875
Q ss_pred cCCCCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCCCCCCcccCC
Q 035861 167 YGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA-KKPLFSGTTEVDQIDKIFKTLGTPTETIWPGL 245 (332)
Q Consensus 167 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (332)
.... ......+..|+|||.+.+ ..++.++|+||||+++|+|++ |..||......+....+.....
T Consensus 150 ~~~~---~~~~~~~~~y~~pe~~~~-~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~---------- 215 (254)
T cd05083 150 GSMG---VDNSKLPVKWTAPEALKH-KKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKECVEKGYR---------- 215 (254)
T ss_pred cccc---CCCCCCCceecCHHHhcc-CCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhCCCC----------
Confidence 4321 122334567999999876 678899999999999999998 9999987765544433322110
Q ss_pred CCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhc
Q 035861 246 SELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALN 305 (332)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 305 (332)
......++..+.+++.+||+.+|++||++.++++
T Consensus 216 --------------------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 249 (254)
T cd05083 216 --------------------------MEPPEGCPADVYVLMTSCWETEPKKRPSFHKLRE 249 (254)
T ss_pred --------------------------CCCCCcCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 0112236889999999999999999999999875
No 344
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=2.5e-39 Score=278.48 Aligned_cols=266 Identities=23% Similarity=0.326 Sum_probs=194.6
Q ss_pred hhcc-cccccccccCcEEEEEEEE----CCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeee
Q 035861 10 VFEF-EKLNKISEGTYGIVYRARD----KKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEV 84 (332)
Q Consensus 10 ~~~y-~~~~~lg~g~~g~v~~~~~----~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~ 84 (332)
.++| ++++.||.|+||+||++.. ..++..||+|.+........ ...+.+|+..++.++||||+++++.
T Consensus 2 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~-------~~~~~~E~~~l~~l~h~~i~~~~~~ 74 (283)
T cd05080 2 HKRYLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQN-------TSGWKKEINILKTLYHENIVKYKGC 74 (283)
T ss_pred ChhhceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHH-------HHHHHHHHHHHHhCCCCCEeeEEEE
Confidence 3566 9999999999999988653 34678899999865422110 1245689999999999999999998
Q ss_pred EEcC-CCeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeeccc
Q 035861 85 VMDD-HDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGM 163 (332)
Q Consensus 85 ~~~~-~~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~ 163 (332)
+... ....+++|||++++.+..... ...+++..++.++.|++.||+|||++|++|+||||+||+++.++.++|+|||.
T Consensus 75 ~~~~~~~~~~lv~e~~~~~~l~~~~~-~~~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~ 153 (283)
T cd05080 75 CSEQGGKGLQLIMEYVPLGSLRDYLP-KHKLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLDNDRLVKIGDFGL 153 (283)
T ss_pred EecCCCceEEEEecCCCCCCHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEEcCCCcEEEeeccc
Confidence 7543 356899999999765554444 34699999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCC---CccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCC
Q 035861 164 SRQYGSPLKP---YTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTET 240 (332)
Q Consensus 164 ~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 240 (332)
+......... .....++..|+|||.+.+ ..++.++|+||||+++|+|++|..|+...... .......... ..
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~-~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~--~~~~~~~~~~--~~ 228 (283)
T cd05080 154 AKAVPEGHEYYRVREDGDSPVFWYAVECLKE-NKFSYASDVWSFGVTLYELLTHCDSKQSPPKK--FEEMIGPKQG--QM 228 (283)
T ss_pred ccccCCcchhhccCCCCCCCceeeCHhHhcc-cCCCcccccHHHHHHHHHHHhCCCCCCCCcch--hhhhhccccc--cc
Confidence 8765432111 122345667999999876 66899999999999999999999998654321 1111100000 00
Q ss_pred cccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhc
Q 035861 241 IWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALN 305 (332)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 305 (332)
.. ...............+..++.++.+++.+||+.+|++||+++++++
T Consensus 229 ---------------~~--~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~ 276 (283)
T cd05080 229 ---------------TV--VRLIELLERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIP 276 (283)
T ss_pred ---------------ch--hhhhhhhhcCCCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence 00 0000000011112223457889999999999999999999999985
No 345
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=2.5e-39 Score=278.70 Aligned_cols=266 Identities=24% Similarity=0.396 Sum_probs=193.4
Q ss_pred cccccccccccCcEEEEEEEE----CCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEc
Q 035861 12 EFEKLNKISEGTYGIVYRARD----KKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMD 87 (332)
Q Consensus 12 ~y~~~~~lg~g~~g~v~~~~~----~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~ 87 (332)
-|++++.||+|++|.||+++. ..++..|++|.+........ ...+.+|+.+++.+.|+|++++.+.+..
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~-------~~~~~~e~~~l~~l~h~~i~~~~~~~~~ 77 (284)
T cd05079 5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNH-------IADLKKEIEILRNLYHENIVKYKGICTE 77 (284)
T ss_pred hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHH-------HHHHHHHHHHHHhCCCCCeeeeeeEEec
Confidence 478999999999999999984 35688899999864432111 1246689999999999999999998855
Q ss_pred C-CCeEEEEcccccccHHH-HHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeeccccc
Q 035861 88 D-HDSVYMVMEYMEHDLKW-LMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSR 165 (332)
Q Consensus 88 ~-~~~~~lv~e~~~~~l~~-~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~ 165 (332)
. ....++||||++|+.+. .+......+++..+..++.|++.||+|||++|++|+||+|+||+++.++.++|+|||.+.
T Consensus 78 ~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~ 157 (284)
T cd05079 78 DGGNGIKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTK 157 (284)
T ss_pred CCCCceEEEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEEcCCCCEEECCCcccc
Confidence 4 35689999999865444 444434568999999999999999999999999999999999999999999999999987
Q ss_pred ccCCCCC---CCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcc
Q 035861 166 QYGSPLK---PYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIW 242 (332)
Q Consensus 166 ~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 242 (332)
....... ......++..|+|||.+.+ ..++.++|+||||+++|+++++..|...... .... ..+......
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~y~apE~~~~-~~~~~~~Di~slG~il~ellt~~~~~~~~~~--~~~~---~~~~~~~~~- 230 (284)
T cd05079 158 AIETDKEYYTVKDDLDSPVFWYAPECLIQ-SKFYIASDVWSFGVTLYELLTYCDSESSPMT--LFLK---MIGPTHGQM- 230 (284)
T ss_pred ccccCccceeecCCCCCCccccCHHHhcc-CCCCccccchhhhhhhhhhhcCCCCCccccc--hhhh---hcccccccc-
Confidence 6533221 1123455677999999876 5688999999999999999998766533211 0000 000000000
Q ss_pred cCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcC
Q 035861 243 PGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNH 306 (332)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 306 (332)
. ...................++..+.+|+.+||+.+|++||++.++++.
T Consensus 231 -----------~----~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 279 (284)
T cd05079 231 -----------T----VTRLVRVLEEGKRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEG 279 (284)
T ss_pred -----------c----HHHHHHHHHcCccCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHH
Confidence 0 000000000011112234478899999999999999999999999864
No 346
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=2.8e-39 Score=281.08 Aligned_cols=253 Identities=21% Similarity=0.351 Sum_probs=195.8
Q ss_pred chhcccccccccccCcEEEEEEEEC-------CCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhC-CCCCeee
Q 035861 9 SVFEFEKLNKISEGTYGIVYRARDK-------KSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSF-DHPSIVN 80 (332)
Q Consensus 9 ~~~~y~~~~~lg~g~~g~v~~~~~~-------~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~ 80 (332)
...+|.+.+.||+|+||.||+++.. .++..+++|.+........ ...+.+|+..++.+ +||||++
T Consensus 13 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~-------~~~~~~E~~~l~~l~~h~~i~~ 85 (304)
T cd05101 13 SRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKD-------LSDLVSEMEMMKMIGKHKNIIN 85 (304)
T ss_pred cHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHH-------HHHHHHHHHHHHhhccCCCchh
Confidence 4568999999999999999999753 2345789998864321111 11456899999999 8999999
Q ss_pred eeeeEEcCCCeEEEEcccccc-cHHHHHHhc---------------CCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCC
Q 035861 81 VKEVVMDDHDSVYMVMEYMEH-DLKWLMESM---------------KQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLK 144 (332)
Q Consensus 81 ~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~---------------~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~ 144 (332)
+++.+.. ....+++|||+++ ++.+.+... ...++...+..++.||+.||+|||++|++|+|||
T Consensus 86 ~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlk 164 (304)
T cd05101 86 LLGACTQ-DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLA 164 (304)
T ss_pred eeEEEec-CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecccc
Confidence 9999844 4788999999986 444444432 1347888899999999999999999999999999
Q ss_pred CCCEEEcCCCcEEEeecccccccCCCCCC--CccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCC
Q 035861 145 TSNLLLNNQGVLKICDFGMSRQYGSPLKP--YTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA-KKPLFSGT 221 (332)
Q Consensus 145 p~Nili~~~~~~~l~df~~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~llt-g~~pf~~~ 221 (332)
|+||+++.++.++|+|||.+......... .....++..|+|||++.+ ..++.++|+||||+++|++++ |..||...
T Consensus 165 p~Nili~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~el~~~g~~p~~~~ 243 (304)
T cd05101 165 ARNVLVTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFD-RVYTHQSDVWSFGVLMWEIFTLGGSPYPGI 243 (304)
T ss_pred cceEEEcCCCcEEECCCccceecccccccccccCCCCCceeeCchhhcc-CCCCchhhHHHHHHHHHHHHcCCCCCcccC
Confidence 99999999999999999998765332111 122344567999999877 668999999999999999998 78888777
Q ss_pred ChHHHHHHHHHHcCCCCCCcccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHH
Q 035861 222 TEVDQIDKIFKTLGTPTETIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVD 301 (332)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ 301 (332)
+..+....+..... ...+..++..+.+|+.+||+.+|.+||++.
T Consensus 244 ~~~~~~~~~~~~~~------------------------------------~~~~~~~~~~~~~li~~cl~~~p~~Rps~~ 287 (304)
T cd05101 244 PVEELFKLLKEGHR------------------------------------MDKPANCTNELYMMMRDCWHAIPSHRPTFK 287 (304)
T ss_pred CHHHHHHHHHcCCc------------------------------------CCCCCCCCHHHHHHHHHHcccChhhCCCHH
Confidence 66555444322110 001123688999999999999999999999
Q ss_pred HHhcC
Q 035861 302 DALNH 306 (332)
Q Consensus 302 ell~h 306 (332)
++++.
T Consensus 288 e~l~~ 292 (304)
T cd05101 288 QLVED 292 (304)
T ss_pred HHHHH
Confidence 99875
No 347
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=3.4e-39 Score=275.84 Aligned_cols=251 Identities=25% Similarity=0.375 Sum_probs=196.2
Q ss_pred hhcccccccccccCcEEEEEEEECCC---CcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEE
Q 035861 10 VFEFEKLNKISEGTYGIVYRARDKKS---GEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVM 86 (332)
Q Consensus 10 ~~~y~~~~~lg~g~~g~v~~~~~~~~---~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~ 86 (332)
.++|.+.+.||.|++|.||+|.+... ...+++|.......... ...+.+|+..++++.|+|++++++++.
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~-------~~~~~~e~~~l~~~~h~~i~~~~~~~~ 77 (270)
T cd05056 5 REDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSV-------REKFLQEAYIMRQFDHPHIVKLIGVIT 77 (270)
T ss_pred hhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHH-------HHHHHHHHHHHHhCCCCchhceeEEEc
Confidence 45789999999999999999987543 34688898865432111 124668999999999999999999874
Q ss_pred cCCCeEEEEcccccc-cHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeeccccc
Q 035861 87 DDHDSVYMVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSR 165 (332)
Q Consensus 87 ~~~~~~~lv~e~~~~-~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~ 165 (332)
+ ...++|||++++ ++.+.+......+++..+..++.|++.||+|||+.|++|+||+|+||+++.++.++|+|||.+.
T Consensus 78 -~-~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~ 155 (270)
T cd05056 78 -E-NPVWIVMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLVSSPDCVKLGDFGLSR 155 (270)
T ss_pred -C-CCcEEEEEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEEecCCCeEEccCceee
Confidence 3 456799999986 5555555545568999999999999999999999999999999999999999999999999987
Q ss_pred ccCCCCC-CCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCCCCCCccc
Q 035861 166 QYGSPLK-PYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA-KKPLFSGTTEVDQIDKIFKTLGTPTETIWP 243 (332)
Q Consensus 166 ~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (332)
....... ......++..|+|||.+.. ..++.++|+||||+++|++++ |..||......+....+.....
T Consensus 156 ~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~-------- 226 (270)
T cd05056 156 YLEDESYYKASKGKLPIKWMAPESINF-RRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRIENGER-------- 226 (270)
T ss_pred ecccccceecCCCCccccccChhhhcc-CCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCc--------
Confidence 6533211 1112233467999998866 668999999999999999986 9999988776555444322111
Q ss_pred CCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcC
Q 035861 244 GLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNH 306 (332)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 306 (332)
...++.++.++.+++.+|+..+|++||++.+++..
T Consensus 227 ----------------------------~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~ 261 (270)
T cd05056 227 ----------------------------LPMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQ 261 (270)
T ss_pred ----------------------------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 11123368899999999999999999999998764
No 348
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=4.6e-39 Score=272.02 Aligned_cols=243 Identities=27% Similarity=0.456 Sum_probs=192.1
Q ss_pred ccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCCeEEEEc
Q 035861 17 NKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHDSVYMVM 96 (332)
Q Consensus 17 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~lv~ 96 (332)
+.||.|++|.||++.+.. ++.|++|.+........ ...+.+|+.+++++.|+||+.+++.+... ...++|+
T Consensus 1 ~~lg~g~~g~v~~~~~~~-~~~v~~K~~~~~~~~~~-------~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-~~~~~v~ 71 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKG-NTEVAVKTCRSTLPPDL-------KRKFLQEAEILKQYDHPNIVKLIGVCVQK-QPIYIVM 71 (251)
T ss_pred CccccCCCceEEEEEEeC-CCcEEEEeccccCCHHH-------HHHHHHHHHHHHhCCCCCeEEEEEEEecC-CCeEEEE
Confidence 469999999999999987 89999998875433210 12467899999999999999999998544 7789999
Q ss_pred cccccc-HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCCCCCCC-
Q 035861 97 EYMEHD-LKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPY- 174 (332)
Q Consensus 97 e~~~~~-l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~~~~~~- 174 (332)
|+++|+ +.+.+......+++..+..++.+++.||++||++|++|+||+|+||+++.++.++|+|||.+..........
T Consensus 72 e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~ 151 (251)
T cd05041 72 ELVPGGSLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVS 151 (251)
T ss_pred EcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEEcCCCcEEEeeccccccccCCcceec
Confidence 999865 555555545678999999999999999999999999999999999999999999999999987653211111
Q ss_pred -ccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCCcccc
Q 035861 175 -TSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA-KKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGAK 252 (332)
Q Consensus 175 -~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (332)
.....+..|+|||.+.+ ..++.++|+||||+++|++++ |..||...........+.....
T Consensus 152 ~~~~~~~~~y~~PE~~~~-~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~~~~~~----------------- 213 (251)
T cd05041 152 DGLKQIPIKWTAPEALNY-GRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIESGYR----------------- 213 (251)
T ss_pred cccCcceeccCChHhhcc-CCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHHHhcCCC-----------------
Confidence 11223556999999876 578999999999999999999 8888877665544443322110
Q ss_pred ccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhc
Q 035861 253 ANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALN 305 (332)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 305 (332)
...+..++..+.+++.+||..+|.+||+++|+++
T Consensus 214 -------------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~ 247 (251)
T cd05041 214 -------------------MPAPQLCPEEIYRLMLQCWAYDPENRPSFSEIYN 247 (251)
T ss_pred -------------------CCCCccCCHHHHHHHHHHhccChhhCcCHHHHHH
Confidence 0111236788999999999999999999999986
No 349
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=7.9e-40 Score=277.85 Aligned_cols=239 Identities=19% Similarity=0.259 Sum_probs=183.2
Q ss_pred ccccccCcEEEEEEEECCCCc-------EEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCC
Q 035861 17 NKISEGTYGIVYRARDKKSGE-------IVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDH 89 (332)
Q Consensus 17 ~~lg~g~~g~v~~~~~~~~~~-------~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 89 (332)
+.||.|+||+||+|.+..++. .+++|.+....... ...+.+|+.+++.+.|||++++++.+..+
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~--------~~~~~~e~~~l~~~~h~~iv~~~~~~~~~- 71 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNY--------SESFFEAASMMSQLSHKHLVLNYGVCVCG- 71 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHH--------HHHHHHHHHHHHhCCCCChhheeeEEEeC-
Confidence 469999999999999865443 37788775432111 12456899999999999999999999655
Q ss_pred CeEEEEcccccccHH-HHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCc--------EEEee
Q 035861 90 DSVYMVMEYMEHDLK-WLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGV--------LKICD 160 (332)
Q Consensus 90 ~~~~lv~e~~~~~l~-~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~--------~~l~d 160 (332)
...++||||++++.+ ..+......+++..+..++.||+.||+|||++|++|+||||+||+++.++. ++++|
T Consensus 72 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d 151 (258)
T cd05078 72 DESIMVQEYVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSD 151 (258)
T ss_pred CCcEEEEecCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccccCCCceEEecc
Confidence 668899999987554 444444456899999999999999999999999999999999999987764 69999
Q ss_pred cccccccCCCCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCC-CCCCCCChHHHHHHHHHHcCCCCC
Q 035861 161 FGMSRQYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKK-PLFSGTTEVDQIDKIFKTLGTPTE 239 (332)
Q Consensus 161 f~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~-~pf~~~~~~~~~~~~~~~~~~~~~ 239 (332)
||.+..... .....++..|+|||++.+...++.++|+||||+++|++++|. .||.......... ......
T Consensus 152 ~g~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~~~-~~~~~~---- 222 (258)
T cd05078 152 PGISITVLP----KEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKKLQ-FYEDRH---- 222 (258)
T ss_pred cccccccCC----chhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHHHH-HHHccc----
Confidence 998765432 223457788999999987566899999999999999999985 5555444332221 111100
Q ss_pred CcccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcC
Q 035861 240 TIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNH 306 (332)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 306 (332)
..+...+.++.+|+.+||+.||++||+++++++.
T Consensus 223 ---------------------------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 256 (258)
T cd05078 223 ---------------------------------QLPAPKWTELANLINQCMDYEPDFRPSFRAIIRD 256 (258)
T ss_pred ---------------------------------cCCCCCcHHHHHHHHHHhccChhhCCCHHHHHHh
Confidence 0111246778999999999999999999999874
No 350
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.5e-41 Score=288.65 Aligned_cols=279 Identities=27% Similarity=0.429 Sum_probs=237.5
Q ss_pred ccchhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEE
Q 035861 7 CRSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVM 86 (332)
Q Consensus 7 ~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~ 86 (332)
...+.+++.+..||-|+||.|-+++.+.....+|+|++++........ ...+..|-.+|..+++|.|++++..+
T Consensus 416 ~v~l~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQ-----qeHv~sEr~Im~~~~s~fIvrLYrTf- 489 (732)
T KOG0614|consen 416 QVKLSDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQ-----QEHVFSERNIMMECRSDFIVRLYRTF- 489 (732)
T ss_pred ccchhhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhH-----HHHHHhHHHHHHhcCchHHHHHHHHh-
Confidence 345678899999999999999999998665568999887654433221 12456899999999999999999999
Q ss_pred cCCCeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccc
Q 035861 87 DDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQ 166 (332)
Q Consensus 87 ~~~~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~ 166 (332)
.+..+.|+.||.|=|+-++.+.+..+.|++..+..++..+++|++|||++||+++||||+|.+++.+|.+||.|||+++.
T Consensus 490 rd~kyvYmLmEaClGGElWTiLrdRg~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd~~Gy~KLVDFGFAKk 569 (732)
T KOG0614|consen 490 RDSKYVYMLMEACLGGELWTILRDRGSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLDNRGYLKLVDFGFAKK 569 (732)
T ss_pred ccchhhhhhHHhhcCchhhhhhhhcCCcccchhhhhHHHHHHHHHHHHhcCceeccCChhheeeccCCceEEeehhhHHH
Confidence 55589999999999887888887789999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCC
Q 035861 167 YGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLS 246 (332)
Q Consensus 167 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (332)
...... --+.+||+.|.|||++.+ +..+.+.|.||||+++||+++|.+||.+.++..++..|.++.....
T Consensus 570 i~~g~K-TwTFcGTpEYVAPEIILn-KGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkGid~i~-------- 639 (732)
T KOG0614|consen 570 IGSGRK-TWTFCGTPEYVAPEIILN-KGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKGIDKIE-------- 639 (732)
T ss_pred hccCCc-eeeecCCcccccchhhhc-cCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhhhhhhh--------
Confidence 866533 345799999999999988 6789999999999999999999999999999999999988642211
Q ss_pred CCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCC-----HHHHhcCCCCCCCCCCCCCC--
Q 035861 247 ELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRIT-----VDDALNHYWFHEVPLPKSKD-- 319 (332)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps-----~~ell~hp~f~~~~~~~~~~-- 319 (332)
-+..++..+.+||+++...+|.+|.. +.+|-+|-||..+.|...+.
T Consensus 640 ---------------------------~Pr~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH~Wf~gfdweglr~~~ 692 (732)
T KOG0614|consen 640 ---------------------------FPRRITKTATDLIKKLCRDNPTERLGYQKGGINDIKKHRWFEGFDWEGLRSRT 692 (732)
T ss_pred ---------------------------cccccchhHHHHHHHHHhcCcHhhhccccCChHHHHhhhhhhcCChhhhhhcc
Confidence 12237889999999999999999985 89999999999999987743
Q ss_pred CCCCCCCcc
Q 035861 320 FMPTFPPQH 328 (332)
Q Consensus 320 ~~~~~~~~~ 328 (332)
..|++.|.-
T Consensus 693 L~pPi~~~v 701 (732)
T KOG0614|consen 693 LPPPIIPSV 701 (732)
T ss_pred CCCCccccC
Confidence 555555543
No 351
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.7e-40 Score=286.44 Aligned_cols=201 Identities=28% Similarity=0.459 Sum_probs=167.6
Q ss_pred hcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCC
Q 035861 11 FEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHD 90 (332)
Q Consensus 11 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 90 (332)
++|.....||+|+||.||+|.... +..||||.+....... ...+..|+..+.+++|||+++++|+|.+...
T Consensus 75 ~~Fs~~~~ig~Ggfg~VYkG~l~~-~~~vAVK~~~~~~~~~--------~~eF~~Ei~~ls~l~H~Nlv~LlGyC~e~~~ 145 (361)
T KOG1187|consen 75 NNFSESNLIGEGGFGTVYKGVLSD-GTVVAVKRLSSNSGQG--------EREFLNEVEILSRLRHPNLVKLLGYCLEGGE 145 (361)
T ss_pred hCCchhcceecCCCeEEEEEEECC-CCEEEEEEecCCCCcc--------hhHHHHHHHHHhcCCCcCcccEEEEEecCCc
Confidence 577777899999999999999874 4889999776544321 1147899999999999999999999976644
Q ss_pred eEEEEccccc-ccHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHHCC---cccccCCCCCEEEcCCCcEEEeeccccc
Q 035861 91 SVYMVMEYME-HDLKWLMESMKQ-PFSTSEVKCLMLQLLEGVKYLHDNW---VLHRDLKTSNLLLNNQGVLKICDFGMSR 165 (332)
Q Consensus 91 ~~~lv~e~~~-~~l~~~~~~~~~-~l~~~~~~~i~~~l~~~L~~lh~~~---i~H~di~p~Nili~~~~~~~l~df~~~~ 165 (332)
..++|+||++ |+|.+.+..... +++|..+.+|+.++|.||+|||... |+||||||+|||+|.+.+.||+|||++.
T Consensus 146 ~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsDFGLa~ 225 (361)
T KOG1187|consen 146 HRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSDFGLAK 225 (361)
T ss_pred eEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccCccCcc
Confidence 6899999998 566666666555 8999999999999999999999754 9999999999999999999999999996
Q ss_pred ccCCCCCCCccc-cccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCC
Q 035861 166 QYGSPLKPYTSL-VVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGT 221 (332)
Q Consensus 166 ~~~~~~~~~~~~-~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~ 221 (332)
............ .||..|++||+... +..+.++||||+|++++|++||+.+....
T Consensus 226 ~~~~~~~~~~~~~~gt~gY~~PEy~~~-g~lt~KsDVySFGVvllElitgr~~~d~~ 281 (361)
T KOG1187|consen 226 LGPEGDTSVSTTVMGTFGYLAPEYAST-GKLTEKSDVYSFGVVLLELITGRKAVDQS 281 (361)
T ss_pred cCCccccceeeecCCCCccCChhhhcc-CCcCcccccccchHHHHHHHhCCcccCCC
Confidence 543211222222 78999999999987 78999999999999999999999887653
No 352
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=5.3e-39 Score=273.12 Aligned_cols=247 Identities=21% Similarity=0.356 Sum_probs=194.7
Q ss_pred hhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCC
Q 035861 10 VFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDH 89 (332)
Q Consensus 10 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 89 (332)
..+|++.+.||+|++|.||++... .+..+++|.+...... ...+.+|+.++++++|+|++++++.+..
T Consensus 5 ~~~~~~~~~lg~g~~~~vy~~~~~-~~~~~~iK~~~~~~~~---------~~~~~~e~~~l~~l~~~~i~~~~~~~~~-- 72 (260)
T cd05073 5 RESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGSMS---------VEAFLAEANVMKTLQHDKLVKLHAVVTK-- 72 (260)
T ss_pred ccceeEEeEecCccceEEEEEEec-CCccEEEEecCCChhH---------HHHHHHHHHHHHhcCCCCcceEEEEEcC--
Confidence 358999999999999999999865 4566999987643211 1145689999999999999999999854
Q ss_pred CeEEEEcccccc-cHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeeccccccc
Q 035861 90 DSVYMVMEYMEH-DLKWLMESM-KQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQY 167 (332)
Q Consensus 90 ~~~~lv~e~~~~-~l~~~~~~~-~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~ 167 (332)
...+++|||+++ ++.+.+... ...+++..+..++.|++.||++||+.|++|+||+|+||+++.++.++|+|||.+...
T Consensus 73 ~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~ 152 (260)
T cd05073 73 EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVI 152 (260)
T ss_pred CCeEEEEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCCcceeec
Confidence 567899999985 566655542 345788999999999999999999999999999999999999999999999988754
Q ss_pred CCCC-CCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCCCCCCcccCC
Q 035861 168 GSPL-KPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA-KKPLFSGTTEVDQIDKIFKTLGTPTETIWPGL 245 (332)
Q Consensus 168 ~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (332)
.... .......++..|+|||.+.. ..++.++|+||||+++|++++ |..||...+..+....+.....
T Consensus 153 ~~~~~~~~~~~~~~~~y~~PE~~~~-~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~---------- 221 (260)
T cd05073 153 EDNEYTAREGAKFPIKWTAPEAINF-GSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYR---------- 221 (260)
T ss_pred cCCCcccccCCcccccccCHhHhcc-CCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCC----------
Confidence 3221 11122334567999999876 668999999999999999998 8999987766555444322111
Q ss_pred CCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhc
Q 035861 246 SELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALN 305 (332)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 305 (332)
......++.++.+++.+||+.+|++||++.++++
T Consensus 222 --------------------------~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~ 255 (260)
T cd05073 222 --------------------------MPRPENCPEELYNIMMRCWKNRPEERPTFEYIQS 255 (260)
T ss_pred --------------------------CCCcccCCHHHHHHHHHHcccCcccCcCHHHHHH
Confidence 0111236788999999999999999999998864
No 353
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=5.1e-39 Score=279.19 Aligned_cols=250 Identities=23% Similarity=0.373 Sum_probs=194.7
Q ss_pred hcccccccccccCcEEEEEEEECCCCc----EEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEE
Q 035861 11 FEFEKLNKISEGTYGIVYRARDKKSGE----IVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVM 86 (332)
Q Consensus 11 ~~y~~~~~lg~g~~g~v~~~~~~~~~~----~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~ 86 (332)
.+|+..+.||+|++|.||+|.+..++. .+++|.+........ ...+.+|+.+++.+.|+||+++++.+.
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~-------~~~~~~e~~~~~~l~h~niv~~~~~~~ 79 (303)
T cd05110 7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKA-------NVEFMDEALIMASMDHPHLVRLLGVCL 79 (303)
T ss_pred hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHH-------HHHHHHHHHHHHhCCCCCcccEEEEEc
Confidence 488999999999999999999877776 467787754322111 113568999999999999999999885
Q ss_pred cCCCeEEEEcccccc-cHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeeccccc
Q 035861 87 DDHDSVYMVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSR 165 (332)
Q Consensus 87 ~~~~~~~lv~e~~~~-~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~ 165 (332)
.. ..+++++++++ ++.+.+......+++..+..++.|++.||+|||++|++|+||||+||+++.++.+||+|||.+.
T Consensus 80 ~~--~~~~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill~~~~~~kL~Dfg~~~ 157 (303)
T cd05110 80 SP--TIQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLAR 157 (303)
T ss_pred CC--CceeeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeeecCCCceEEccccccc
Confidence 43 36789999985 5666666555678999999999999999999999999999999999999999999999999997
Q ss_pred ccCCCCC--CCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCCCCCCcc
Q 035861 166 QYGSPLK--PYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA-KKPLFSGTTEVDQIDKIFKTLGTPTETIW 242 (332)
Q Consensus 166 ~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 242 (332)
....... ......++..|+|||.+.+ ..++.++|+||||+++|++++ |..||...........+....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~-~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~-------- 228 (303)
T cd05110 158 LLEGDEKEYNADGGKMPIKWMALECIHY-RKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKGE-------- 228 (303)
T ss_pred cccCcccccccCCCccccccCCHHHhcc-CCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCC--------
Confidence 6532221 1222345678999999876 678999999999999999997 899997765443332221110
Q ss_pred cCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcC
Q 035861 243 PGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNH 306 (332)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 306 (332)
.....+.++..+.+++.+||..+|++||+++++++.
T Consensus 229 ----------------------------~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~ 264 (303)
T cd05110 229 ----------------------------RLPQPPICTIDVYMVMVKCWMIDADSRPKFKELAAE 264 (303)
T ss_pred ----------------------------CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 011122367788999999999999999999998875
No 354
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=100.00 E-value=1.9e-39 Score=271.89 Aligned_cols=229 Identities=24% Similarity=0.353 Sum_probs=181.6
Q ss_pred cCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCCeEEEEcccccc
Q 035861 22 GTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEH 101 (332)
Q Consensus 22 g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~lv~e~~~~ 101 (332)
|.+|.||++.+..+++.+|+|.+..... ...|...+....|||++++++.+... ...+++|||++|
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~~-------------~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~lv~e~~~~ 69 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSSE-------------YSRERLTIIPHCVPNMVCLHKYIVSE-DSVFLVLQHAEG 69 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchhh-------------hhhHHHHHHhcCCCceeehhhheecC-CeEEEEEecCCC
Confidence 8899999999999999999999976431 11344555556799999999998554 789999999997
Q ss_pred cHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCCCCCCCccccccc
Q 035861 102 DLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTL 181 (332)
Q Consensus 102 ~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~ 181 (332)
+.+.........+++..+..++.|++.||+|||+.|++|+||||+||+++.++.++++|||.+...... .....++.
T Consensus 70 ~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~---~~~~~~~~ 146 (237)
T cd05576 70 GKLWSHISKFLNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDS---CDGEAVEN 146 (237)
T ss_pred CCHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEecccchhccccc---cccCCcCc
Confidence 544443334567999999999999999999999999999999999999999999999999987655332 12334566
Q ss_pred cccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCCccccccccCCchh
Q 035861 182 WYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGAKANFAKQPYN 261 (332)
Q Consensus 182 ~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (332)
.|+|||.+.. ..++.++|+||+|+++|++++|..|+....... .
T Consensus 147 ~y~aPE~~~~-~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~------~----------------------------- 190 (237)
T cd05576 147 MYCAPEVGGI-SEETEACDWWSLGAILFELLTGKTLVECHPSGI------N----------------------------- 190 (237)
T ss_pred cccCCcccCC-CCCCchhhHHHHHHHHHHHHHCcchhhcCchhc------c-----------------------------
Confidence 7999998865 567899999999999999999998875322100 0
Q ss_pred hhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCH-----HHHhcCCCC
Q 035861 262 LLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITV-----DDALNHYWF 309 (332)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~-----~ell~hp~f 309 (332)
.......++.++..+++||.+||+.||++|+++ +++++||||
T Consensus 191 ------~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h~~~ 237 (237)
T cd05576 191 ------THTTLNIPEWVSEEARSLLQQLLQFNPTERLGAGVAGVEDIKSHPFF 237 (237)
T ss_pred ------cccccCCcccCCHHHHHHHHHHccCCHHHhcCCCccchHHHHcCCCC
Confidence 000011123378899999999999999999985 999999998
No 355
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=5.9e-39 Score=275.07 Aligned_cols=252 Identities=19% Similarity=0.355 Sum_probs=195.3
Q ss_pred hcccccccccccCcEEEEEEEECC-----CCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeE
Q 035861 11 FEFEKLNKISEGTYGIVYRARDKK-----SGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVV 85 (332)
Q Consensus 11 ~~y~~~~~lg~g~~g~v~~~~~~~-----~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~ 85 (332)
.+|++++.||.|+||+||+|+... +.+.+++|.+....... ....+.+|++++++++|+|++++++.+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~-------~~~~~~~E~~~l~~l~h~~iv~~~~~~ 77 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDEN-------LQSEFRRELDMFRKLSHKNVVRLLGLC 77 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchH-------HHHHHHHHHHHHHhcCCcceeeeEEEE
Confidence 589999999999999999999753 34678888875432210 011456899999999999999999988
Q ss_pred EcCCCeEEEEcccccccHHHHHHhcCC---------CCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcE
Q 035861 86 MDDHDSVYMVMEYMEHDLKWLMESMKQ---------PFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVL 156 (332)
Q Consensus 86 ~~~~~~~~lv~e~~~~~l~~~~~~~~~---------~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~ 156 (332)
.+....++||||++++.+........ .+++..+..++.|++.||+|||+.|++|+||+|+||+++.++.+
T Consensus 78 -~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili~~~~~~ 156 (275)
T cd05046 78 -REAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLVSSQREV 156 (275)
T ss_pred -CCCCcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEEeCCCcE
Confidence 44577899999999644443333233 68999999999999999999999999999999999999999999
Q ss_pred EEeecccccccCC-CCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHc
Q 035861 157 KICDFGMSRQYGS-PLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA-KKPLFSGTTEVDQIDKIFKTL 234 (332)
Q Consensus 157 ~l~df~~~~~~~~-~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~llt-g~~pf~~~~~~~~~~~~~~~~ 234 (332)
+++|||.+..... .........++..|+|||.+.+ ...+.++|+||||+++|++++ |..||...........+....
T Consensus 157 ~l~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~-~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~~~~~~~~~~ 235 (275)
T cd05046 157 KVSLLSLSKDVYNSEYYKLRNALIPLRWLAPEAVQE-DDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNRLQAGK 235 (275)
T ss_pred EEcccccccccCcccccccCCceeEEeecChhhhcc-CCCCchhhHHHHHHHHHHHHhCCCCCccccchHHHHHHHHcCC
Confidence 9999998764322 1122233456778999999876 567899999999999999998 788997665544444332111
Q ss_pred CCCCCCcccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcC
Q 035861 235 GTPTETIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNH 306 (332)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 306 (332)
.. ......++..+.+++.+||+.+|++||++.++++.
T Consensus 236 ~~-----------------------------------~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~ 272 (275)
T cd05046 236 LE-----------------------------------LPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSA 272 (275)
T ss_pred cC-----------------------------------CCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHH
Confidence 00 01112367899999999999999999999999864
No 356
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=6.2e-39 Score=272.16 Aligned_cols=244 Identities=25% Similarity=0.360 Sum_probs=193.3
Q ss_pred ccccccCcEEEEEEEECC-CC--cEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCCeEE
Q 035861 17 NKISEGTYGIVYRARDKK-SG--EIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHDSVY 93 (332)
Q Consensus 17 ~~lg~g~~g~v~~~~~~~-~~--~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 93 (332)
+.||+|++|+||+|.+.. .+ ..+|||.+...... .....+..|+..+++++|+||+++++.+.. ...+
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~-------~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~--~~~~ 71 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLS-------DIMDDFLKEAAIMHSLDHENLIRLYGVVLT--HPLM 71 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccH-------HHHHHHHHHHHHHhhcCCCCccceeEEEcC--CeEE
Confidence 468999999999999865 23 36899988765432 111256789999999999999999999855 7789
Q ss_pred EEcccccc-cHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCCCC
Q 035861 94 MVMEYMEH-DLKWLMESMK-QPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPL 171 (332)
Q Consensus 94 lv~e~~~~-~l~~~~~~~~-~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~~~ 171 (332)
+++|++++ ++.+.+.... ..+++..++.++.|++.||++||++|++|+||+|+||+++.++.++|+|||.+.......
T Consensus 72 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~ 151 (257)
T cd05040 72 MVTELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNE 151 (257)
T ss_pred EEEEecCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEEecCCEEEeccccccccccccc
Confidence 99999975 5555555543 468999999999999999999999999999999999999999999999999987664322
Q ss_pred CC---CccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCC
Q 035861 172 KP---YTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA-KKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSE 247 (332)
Q Consensus 172 ~~---~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (332)
.. .....++..|+|||.+.. ..++.++|+||||+++|+|++ |..||...+..+....+......
T Consensus 152 ~~~~~~~~~~~~~~y~~pE~~~~-~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~----------- 219 (257)
T cd05040 152 DHYVMEEHLKVPFAWCAPESLRT-RTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKIDKEGER----------- 219 (257)
T ss_pred cceecccCCCCCceecCHHHhcc-cCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCc-----------
Confidence 11 112345678999999876 668999999999999999998 99999877666555544321100
Q ss_pred CccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhc
Q 035861 248 LPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALN 305 (332)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 305 (332)
...+..++..+.+++.+||+.+|++||++.++++
T Consensus 220 ------------------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~ 253 (257)
T cd05040 220 ------------------------LERPEACPQDIYNVMLQCWAHNPADRPTFAALRE 253 (257)
T ss_pred ------------------------CCCCccCCHHHHHHHHHHCCCCcccCCCHHHHHH
Confidence 0011226788999999999999999999999985
No 357
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=8.5e-39 Score=276.97 Aligned_cols=257 Identities=25% Similarity=0.360 Sum_probs=192.2
Q ss_pred hcccccccccccCcEEEEEEEECC----------------CCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCC
Q 035861 11 FEFEKLNKISEGTYGIVYRARDKK----------------SGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFD 74 (332)
Q Consensus 11 ~~y~~~~~lg~g~~g~v~~~~~~~----------------~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~ 74 (332)
++|++.+.||+|+||+||++.+.. ++..+|+|++........ ...+.+|+..++.++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~-------~~~~~~E~~~l~~l~ 77 (296)
T cd05095 5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNA-------RNDFLKEIKIMSRLK 77 (296)
T ss_pred hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHH-------HHHHHHHHHHHHhCC
Confidence 479999999999999999986432 344688898864321110 124668999999999
Q ss_pred CCCeeeeeeeEEcCCCeEEEEcccccc-cHHHHHHhcC----------CCCCHHHHHHHHHHHHHHHHHHHHCCcccccC
Q 035861 75 HPSIVNVKEVVMDDHDSVYMVMEYMEH-DLKWLMESMK----------QPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDL 143 (332)
Q Consensus 75 h~~i~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~----------~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di 143 (332)
|+||+++++.+..+ ...+++|||+++ ++.+.+.... ..+++..+..++.|++.||+|||+.|++|+||
T Consensus 78 ~~~i~~~~~~~~~~-~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl 156 (296)
T cd05095 78 DPNIIRLLAVCITS-DPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDL 156 (296)
T ss_pred CCCcceEEEEEecC-CccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeecccC
Confidence 99999999998554 678999999986 5544444321 23677899999999999999999999999999
Q ss_pred CCCCEEEcCCCcEEEeecccccccCCCCC--CCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHh--CCCCCC
Q 035861 144 KTSNLLLNNQGVLKICDFGMSRQYGSPLK--PYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA--KKPLFS 219 (332)
Q Consensus 144 ~p~Nili~~~~~~~l~df~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~llt--g~~pf~ 219 (332)
||+||+++.++.++|+|||.+........ ......++..|++||.... ..++.++|+||||+++|+|++ |..||.
T Consensus 157 kp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~~DiwSlG~~l~el~~~~~~~p~~ 235 (296)
T cd05095 157 ATRNCLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILL-GKFTTASDVWAFGVTLWEILTLCKEQPYS 235 (296)
T ss_pred ChheEEEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhc-CCccchhhhhHHHHHHHHHHHhCCCCCcc
Confidence 99999999999999999999876432211 1122334577999998776 568999999999999999998 778887
Q ss_pred CCChHHHHHHHHHHcCCCCCCcccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCC
Q 035861 220 GTTEVDQIDKIFKTLGTPTETIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRIT 299 (332)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps 299 (332)
..+..+............ ........+..++..+.+|+.+||+.||.+||+
T Consensus 236 ~~~~~~~~~~~~~~~~~~-----------------------------~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~ 286 (296)
T cd05095 236 QLSDEQVIENTGEFFRDQ-----------------------------GRQVYLPKPALCPDSLYKLMLSCWRRNAKERPS 286 (296)
T ss_pred ccChHHHHHHHHHHHhhc-----------------------------cccccCCCCCCCCHHHHHHHHHHcCCCcccCCC
Confidence 766554443322110000 000001112336788999999999999999999
Q ss_pred HHHHhc
Q 035861 300 VDDALN 305 (332)
Q Consensus 300 ~~ell~ 305 (332)
+.+|++
T Consensus 287 ~~~i~~ 292 (296)
T cd05095 287 FQEIHA 292 (296)
T ss_pred HHHHHH
Confidence 999875
No 358
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=1.1e-38 Score=285.33 Aligned_cols=253 Identities=22% Similarity=0.336 Sum_probs=195.3
Q ss_pred hhcccccccccccCcEEEEEEEEC-----CCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCC-CCCeeeeee
Q 035861 10 VFEFEKLNKISEGTYGIVYRARDK-----KSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFD-HPSIVNVKE 83 (332)
Q Consensus 10 ~~~y~~~~~lg~g~~g~v~~~~~~-----~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~ 83 (332)
.++|.+.+.||+|+||.||+|++. .+++.||+|++........ ...+..|+.++.++. ||||+++++
T Consensus 36 ~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~-------~~~~~~E~~~l~~l~~H~niv~~~~ 108 (401)
T cd05107 36 RDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSE-------KQALMSELKIMSHLGPHLNIVNLLG 108 (401)
T ss_pred HHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhH-------HHHHHHHHHHHHhcCCCCCeEEEEE
Confidence 457889999999999999999964 3456899999975432211 124678999999997 999999999
Q ss_pred eEEcCCCeEEEEcccccc-cHHHHHHhcC---------------------------------------------------
Q 035861 84 VVMDDHDSVYMVMEYMEH-DLKWLMESMK--------------------------------------------------- 111 (332)
Q Consensus 84 ~~~~~~~~~~lv~e~~~~-~l~~~~~~~~--------------------------------------------------- 111 (332)
.+... ...++|+||+.+ ++.+.+....
T Consensus 109 ~~~~~-~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (401)
T cd05107 109 ACTKG-GPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESA 187 (401)
T ss_pred EEccC-CCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCcccc
Confidence 98554 678999999986 4554443311
Q ss_pred ----------------------------------------------CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCC
Q 035861 112 ----------------------------------------------QPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKT 145 (332)
Q Consensus 112 ----------------------------------------------~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p 145 (332)
..+++..+..++.||+.||+|||+.|++|+||||
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrdlkp 267 (401)
T cd05107 188 DYVPMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKNCVHRDLAA 267 (401)
T ss_pred CccchhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCcCcccCCc
Confidence 1356778889999999999999999999999999
Q ss_pred CCEEEcCCCcEEEeecccccccCCCC--CCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCC
Q 035861 146 SNLLLNNQGVLKICDFGMSRQYGSPL--KPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA-KKPLFSGTT 222 (332)
Q Consensus 146 ~Nili~~~~~~~l~df~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~llt-g~~pf~~~~ 222 (332)
+||+++.++.++|+|||.+....... .......++..|+|||.+.. ..++.++|+||||+++|+|++ |..||....
T Consensus 268 ~NiLl~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGvil~e~l~~g~~P~~~~~ 346 (401)
T cd05107 268 RNVLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFN-NLYTTLSDVWSFGILLWEIFTLGGTPYPELP 346 (401)
T ss_pred ceEEEeCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcC-CCCCcHhHHHHHHHHHHHHHHcCCCCCCCCC
Confidence 99999999999999999987542211 11223356778999999876 668999999999999999998 889997655
Q ss_pred hHHHHHHHHHHcCCCCCCcccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHH
Q 035861 223 EVDQIDKIFKTLGTPTETIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDD 302 (332)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e 302 (332)
..+.......... ....+..++.++.+|+.+||..+|.+||++.+
T Consensus 347 ~~~~~~~~~~~~~-----------------------------------~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~e 391 (401)
T cd05107 347 MNEQFYNAIKRGY-----------------------------------RMAKPAHASDEIYEIMQKCWEEKFEIRPDFSQ 391 (401)
T ss_pred chHHHHHHHHcCC-----------------------------------CCCCCCCCCHHHHHHHHHHcCCChhHCcCHHH
Confidence 4444333322110 01112336889999999999999999999999
Q ss_pred HhcC
Q 035861 303 ALNH 306 (332)
Q Consensus 303 ll~h 306 (332)
|++.
T Consensus 392 ll~~ 395 (401)
T cd05107 392 LVHL 395 (401)
T ss_pred HHHH
Confidence 9864
No 359
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=7.9e-39 Score=281.74 Aligned_cols=251 Identities=20% Similarity=0.353 Sum_probs=194.0
Q ss_pred hcccccccccccCcEEEEEEEECC-------CCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhC-CCCCeeeee
Q 035861 11 FEFEKLNKISEGTYGIVYRARDKK-------SGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSF-DHPSIVNVK 82 (332)
Q Consensus 11 ~~y~~~~~lg~g~~g~v~~~~~~~-------~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~ 82 (332)
.+|++.+.||+|+||.||++.+.. ++..+++|.+........ ...+.+|+.+++++ +|+||++++
T Consensus 12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~-------~~~~~~E~~~l~~l~~h~~iv~~~ 84 (334)
T cd05100 12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKD-------LSDLVSEMEMMKMIGKHKNIINLL 84 (334)
T ss_pred hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHH-------HHHHHHHHHHHHhhcCCCCeeeee
Confidence 379999999999999999998643 223689998764321111 11456899999999 899999999
Q ss_pred eeEEcCCCeEEEEcccccc-cHHHHHHhc---------------CCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCC
Q 035861 83 EVVMDDHDSVYMVMEYMEH-DLKWLMESM---------------KQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTS 146 (332)
Q Consensus 83 ~~~~~~~~~~~lv~e~~~~-~l~~~~~~~---------------~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~ 146 (332)
+.+..+ ...++++||+++ ++.+.+... ...++...+..++.|++.||+|||++|++|+||+|+
T Consensus 85 ~~~~~~-~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp~ 163 (334)
T cd05100 85 GACTQD-GPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAAR 163 (334)
T ss_pred EEEccC-CceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeeccccccc
Confidence 998544 778999999986 455544432 124778889999999999999999999999999999
Q ss_pred CEEEcCCCcEEEeecccccccCCCCC--CCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCh
Q 035861 147 NLLLNNQGVLKICDFGMSRQYGSPLK--PYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA-KKPLFSGTTE 223 (332)
Q Consensus 147 Nili~~~~~~~l~df~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~llt-g~~pf~~~~~ 223 (332)
||+++.++.++|+|||.++....... ......++..|+|||++.+ ..++.++|+||||+++|+|++ |..||...+.
T Consensus 164 Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~el~~~g~~p~~~~~~ 242 (334)
T cd05100 164 NVLVTEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFD-RVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPV 242 (334)
T ss_pred eEEEcCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhcc-CCcCchhhhHHHHHHHHHHHhcCCCCCCCCCH
Confidence 99999999999999999876532211 1122234567999999876 678899999999999999998 8899987766
Q ss_pred HHHHHHHHHHcCCCCCCcccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHH
Q 035861 224 VDQIDKIFKTLGTPTETIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDA 303 (332)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~el 303 (332)
.+....+..... ......++.++.+|+.+||+.+|++||++.++
T Consensus 243 ~~~~~~~~~~~~------------------------------------~~~~~~~~~~l~~li~~cl~~~p~~Rps~~el 286 (334)
T cd05100 243 EELFKLLKEGHR------------------------------------MDKPANCTHELYMIMRECWHAVPSQRPTFKQL 286 (334)
T ss_pred HHHHHHHHcCCC------------------------------------CCCCCCCCHHHHHHHHHHcccChhhCcCHHHH
Confidence 555444432110 01112367889999999999999999999999
Q ss_pred hcC
Q 035861 304 LNH 306 (332)
Q Consensus 304 l~h 306 (332)
+++
T Consensus 287 l~~ 289 (334)
T cd05100 287 VED 289 (334)
T ss_pred HHH
Confidence 987
No 360
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=6.7e-40 Score=298.30 Aligned_cols=248 Identities=27% Similarity=0.453 Sum_probs=206.9
Q ss_pred hcccccccccccCcEEEEEEEECC-----CCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeE
Q 035861 11 FEFEKLNKISEGTYGIVYRARDKK-----SGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVV 85 (332)
Q Consensus 11 ~~y~~~~~lg~g~~g~v~~~~~~~-----~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~ 85 (332)
.+.++.+.||+|+||.||+|+... +...||||.++....... .++|.+|++++..++||||++++|+|
T Consensus 486 ~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~-------~~dF~REaeLla~l~H~nIVrLlGVC 558 (774)
T KOG1026|consen 486 SDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQA-------RQDFRREAELLAELQHPNIVRLLGVC 558 (774)
T ss_pred hheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHH-------HHHHHHHHHHHHhccCCCeEEEEEEE
Confidence 467889999999999999998642 345799999976543211 23678999999999999999999999
Q ss_pred EcCCCeEEEEccccc-ccHHHHHHhcC-------------CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEc
Q 035861 86 MDDHDSVYMVMEYME-HDLKWLMESMK-------------QPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLN 151 (332)
Q Consensus 86 ~~~~~~~~lv~e~~~-~~l~~~~~~~~-------------~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~ 151 (332)
.++ +.+|+|+||+. |+|.+.++.+. .+++..+.+.|+.|||.|+.||-++.++|+||-..|+||.
T Consensus 559 ~~~-~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLVg 637 (774)
T KOG1026|consen 559 REG-DPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRNCLVG 637 (774)
T ss_pred ccC-CeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhhceec
Confidence 555 78999999998 67766665532 1278899999999999999999999999999999999999
Q ss_pred CCCcEEEeecccccccCCCCCCCc---cccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHH
Q 035861 152 NQGVLKICDFGMSRQYGSPLKPYT---SLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA-KKPLFSGTTEVDQI 227 (332)
Q Consensus 152 ~~~~~~l~df~~~~~~~~~~~~~~---~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~llt-g~~pf~~~~~~~~~ 227 (332)
++-.|||+|||+++..-+. +.+. .-.-+++|||||.+.. +.++.+|||||+||+|||+++ |..||.+..+.+.+
T Consensus 638 e~l~VKIsDfGLsRdiYss-DYYk~~~~t~lPIRWMppEsIly-~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EVI 715 (774)
T KOG1026|consen 638 ENLVVKISDFGLSRDIYSS-DYYKVRGNTLLPIRWMPPESILY-GKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEVI 715 (774)
T ss_pred cceEEEecccccchhhhhh-hhhcccCCceeeeecCCHHHhhc-CcccchhhhhhhhhhhhhhhccccCcccccchHHHH
Confidence 9999999999999865322 2111 1233678999999998 789999999999999999998 99999999988888
Q ss_pred HHHHHHcCCCCCCcccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHh
Q 035861 228 DKIFKTLGTPTETIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDAL 304 (332)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell 304 (332)
+.+..+ ..++.+..++.++.+|+..||+.+|.+||++.||=
T Consensus 716 e~i~~g------------------------------------~lL~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~ 756 (774)
T KOG1026|consen 716 ECIRAG------------------------------------QLLSCPENCPTEVYSLMLECWNENPKRRPSFKEIH 756 (774)
T ss_pred HHHHcC------------------------------------CcccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHH
Confidence 877654 22555666999999999999999999999999873
No 361
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=1.6e-38 Score=271.64 Aligned_cols=243 Identities=25% Similarity=0.400 Sum_probs=185.5
Q ss_pred ccccccCcEEEEEEEECCCCc--EEEEEEeecccCCcccccccCCCcchhHHHHHHhhC-CCCCeeeeeeeEEcCCCeEE
Q 035861 17 NKISEGTYGIVYRARDKKSGE--IVALKKVKMNVGRKEDCLEYGFPISSLREINILLSF-DHPSIVNVKEVVMDDHDSVY 93 (332)
Q Consensus 17 ~~lg~g~~g~v~~~~~~~~~~--~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~ 93 (332)
+.||+|++|.||+|+...++. .+++|.+........ ...+.+|+..+.++ .||||+++++.+.. ....+
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~-------~~~~~~E~~~l~~l~~h~~iv~~~~~~~~-~~~~~ 72 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDD-------HRDFAGELEVLCKLGHHPNIINLLGACEH-RGYLY 72 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHH-------HHHHHHHHHHHHhhccCCCeeeEEEEEec-CCCce
Confidence 368999999999999987775 457777753221111 11456899999999 79999999999844 47789
Q ss_pred EEcccccc-cHHHHHHhcC---------------CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEE
Q 035861 94 MVMEYMEH-DLKWLMESMK---------------QPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLK 157 (332)
Q Consensus 94 lv~e~~~~-~l~~~~~~~~---------------~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~ 157 (332)
++|||+++ ++.+.+.... ..+++..+..++.|++.||+|||++|++|+||||+||+++.++.++
T Consensus 73 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili~~~~~~k 152 (270)
T cd05047 73 LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAK 152 (270)
T ss_pred EEEEeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEEcCCCeEE
Confidence 99999985 5555554321 2478999999999999999999999999999999999999999999
Q ss_pred EeecccccccCCCCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCC
Q 035861 158 ICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA-KKPLFSGTTEVDQIDKIFKTLGT 236 (332)
Q Consensus 158 l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~llt-g~~pf~~~~~~~~~~~~~~~~~~ 236 (332)
|+|||++...... ........+..|+|||++.. ..++.++|+||||+++|+|++ |..||...+..+....+....
T Consensus 153 l~dfgl~~~~~~~-~~~~~~~~~~~y~apE~~~~-~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~-- 228 (270)
T cd05047 153 IADFGLSRGQEVY-VKKTMGRLPVRWMAIESLNY-SVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGY-- 228 (270)
T ss_pred ECCCCCccccchh-hhccCCCCccccCChHHHcc-CCCCchhhHHHHHHHHHHHHcCCCCCccccCHHHHHHHHhCCC--
Confidence 9999988533211 11112233567999999876 678999999999999999997 999997765544443331110
Q ss_pred CCCCcccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhc
Q 035861 237 PTETIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALN 305 (332)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 305 (332)
.......++.++.+|+.+||+.+|.+||++.++++
T Consensus 229 ----------------------------------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 263 (270)
T cd05047 229 ----------------------------------RLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILV 263 (270)
T ss_pred ----------------------------------CCCCCCcCCHHHHHHHHHHcccChhhCCCHHHHHH
Confidence 00111236788999999999999999999999986
No 362
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=1.4e-38 Score=270.24 Aligned_cols=236 Identities=20% Similarity=0.282 Sum_probs=182.8
Q ss_pred ccccccCcEEEEEEEECCCC----------cEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEE
Q 035861 17 NKISEGTYGIVYRARDKKSG----------EIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVM 86 (332)
Q Consensus 17 ~~lg~g~~g~v~~~~~~~~~----------~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~ 86 (332)
+.||+|+||.||+|.+..++ ..+++|.+...... ...+.+|+..++.++|+||+++++.+.
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~---------~~~~~~e~~~l~~l~h~~i~~~~~~~~ 71 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD---------SLAFFETASLMSQLSHKHLVKLYGVCV 71 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh---------HHHHHHHHHHHHcCCCcchhheeeEEe
Confidence 46999999999999998766 34777776543221 125678999999999999999999885
Q ss_pred cCCCeEEEEcccccccHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCC-------cEEE
Q 035861 87 DDHDSVYMVMEYMEHDLKWLMESMK-QPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQG-------VLKI 158 (332)
Q Consensus 87 ~~~~~~~lv~e~~~~~l~~~~~~~~-~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~-------~~~l 158 (332)
. ...++|+||++++.++...... ..+++..+..++.||+.||+|||++|++|+||||+||+++.++ .++|
T Consensus 72 ~--~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl 149 (259)
T cd05037 72 R--DENIMVEEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIKL 149 (259)
T ss_pred c--CCcEEEEEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCccccCCceeEEe
Confidence 5 5578999999976555554433 3799999999999999999999999999999999999999887 7999
Q ss_pred eecccccccCCCCCCCccccccccccchhhhcCC-CCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCC
Q 035861 159 CDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGA-KKYSTAVDMWSVGCIMAELLA-KKPLFSGTTEVDQIDKIFKTLGT 236 (332)
Q Consensus 159 ~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~sDi~slG~~l~~llt-g~~pf~~~~~~~~~~~~~~~~~~ 236 (332)
+|||.+..... .....++..|+|||.+... ..++.++|+||||+++|++++ |..||.......... .......
T Consensus 150 ~Dfg~a~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~~-~~~~~~~ 224 (259)
T cd05037 150 SDPGIPITVLS----REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKER-FYQDQHR 224 (259)
T ss_pred CCCCccccccc----ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHHH-HHhcCCC
Confidence 99999876533 2233456779999998764 378999999999999999999 577776654222111 1111000
Q ss_pred CCCCcccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhc
Q 035861 237 PTETIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALN 305 (332)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 305 (332)
. +......+.+++.+||..+|++||++.++++
T Consensus 225 ~-------------------------------------~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 256 (259)
T cd05037 225 L-------------------------------------PMPDCAELANLINQCWTYDPTKRPSFRAILR 256 (259)
T ss_pred C-------------------------------------CCCCchHHHHHHHHHhccChhhCCCHHHHHH
Confidence 0 0002367889999999999999999999986
No 363
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-40 Score=312.99 Aligned_cols=264 Identities=28% Similarity=0.436 Sum_probs=220.2
Q ss_pred chhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcC
Q 035861 9 SVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDD 88 (332)
Q Consensus 9 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 88 (332)
...+++....||.|.||.||.+.+..+|+..|+|-+...... ......+.+|..++..++|||++.++|+-+-.
T Consensus 1233 V~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~------~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHR 1306 (1509)
T KOG4645|consen 1233 VTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSD------HKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHR 1306 (1509)
T ss_pred ceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccc------cccCcchHHHHHHHHhccCccccccCceeecH
Confidence 344788899999999999999999999999999998876554 22334678999999999999999999998544
Q ss_pred CCeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccC
Q 035861 89 HDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYG 168 (332)
Q Consensus 89 ~~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~ 168 (332)
...+|.||||.|+++..+....+..++.....+..|++.|++|||+.||+|+||||.||+++-+|.+|++|||.|....
T Consensus 1307 -ekv~IFMEyC~~GsLa~ll~~gri~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~ 1385 (1509)
T KOG4645|consen 1307 -EKVYIFMEYCEGGSLASLLEHGRIEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILLDFNGLIKYGDFGSAVKIK 1385 (1509)
T ss_pred -HHHHHHHHHhccCcHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceeeecCCcEEeecccceeEec
Confidence 6688999999998888888877788899999999999999999999999999999999999999999999999998875
Q ss_pred CCCCC----CccccccccccchhhhcCCC--CCCchhHHHHHHHHHHHHHhCCCCCCCC-ChHHHHHHHHHHcCCCCCCc
Q 035861 169 SPLKP----YTSLVVTLWYRAPELLLGAK--KYSTAVDMWSVGCIMAELLAKKPLFSGT-TEVDQIDKIFKTLGTPTETI 241 (332)
Q Consensus 169 ~~~~~----~~~~~~~~~y~aPE~~~~~~--~~~~~sDi~slG~~l~~lltg~~pf~~~-~~~~~~~~~~~~~~~~~~~~ 241 (332)
.+... .....||+.|||||++.+.+ ...-++|||||||++.||+||+.||... +.++....+..+..+..+
T Consensus 1386 ~~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIMy~V~~gh~Pq~P-- 1463 (1509)
T KOG4645|consen 1386 NNAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIMYHVAAGHKPQIP-- 1463 (1509)
T ss_pred CchhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhHHHhHHhccCCCCCc--
Confidence 54322 23457999999999997633 4567999999999999999999999864 555555555444322221
Q ss_pred ccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCCCC
Q 035861 242 WPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVPLP 315 (332)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~ 315 (332)
..+|++.++||..||..||.+|.++.|||+|-|=+.-...
T Consensus 1464 ----------------------------------~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~~f~~~~~d~ 1503 (1509)
T KOG4645|consen 1464 ----------------------------------ERLSSEGRDFLEHCLEQDPKMRWTASQLLEHAFGKSCTDE 1503 (1509)
T ss_pred ----------------------------------hhhhHhHHHHHHHHHhcCchhhhHHHHHHHhhcccccccc
Confidence 1279999999999999999999999999999987664433
No 364
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=2.7e-38 Score=273.36 Aligned_cols=262 Identities=15% Similarity=0.158 Sum_probs=186.9
Q ss_pred hcccccccccccCcEEEEEEEECCC---CcEEEEEEeecccCCccccc---ccCCCcchhHHHHHHhhCCCCCeeeeeee
Q 035861 11 FEFEKLNKISEGTYGIVYRARDKKS---GEIVALKKVKMNVGRKEDCL---EYGFPISSLREINILLSFDHPSIVNVKEV 84 (332)
Q Consensus 11 ~~y~~~~~lg~g~~g~v~~~~~~~~---~~~v~iK~~~~~~~~~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~ 84 (332)
++|++.+.||+|+||+||+|.+..+ +..+++|+............ ..........+...+..+.|++++.+++.
T Consensus 12 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~ 91 (294)
T PHA02882 12 KEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGC 91 (294)
T ss_pred CceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEe
Confidence 5899999999999999999998877 66777776543221110000 00000111233344566789999999987
Q ss_pred EEcCCC---eEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeec
Q 035861 85 VMDDHD---SVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDF 161 (332)
Q Consensus 85 ~~~~~~---~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df 161 (332)
...... ..+++++++..++.+.+.. ....++..+..++.|++.||+|||+.|++||||||+||+++.++.++|+||
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill~~~~~~~l~DF 170 (294)
T PHA02882 92 GSFKRCRMYYRFILLEKLVENTKEIFKR-IKCKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMVDGNNRGYIIDY 170 (294)
T ss_pred eeEecCCceEEEEEEehhccCHHHHHHh-hccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCcEEEEEc
Confidence 643322 4578888887776655543 445688899999999999999999999999999999999999999999999
Q ss_pred ccccccCCCC-------CCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHH-H
Q 035861 162 GMSRQYGSPL-------KPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFK-T 233 (332)
Q Consensus 162 ~~~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~-~ 233 (332)
|+++...... .......||+.|+|||++.+ ..++.++|+||||+++|+|++|..||.............. .
T Consensus 171 Gla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~-~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~~~~~~ 249 (294)
T PHA02882 171 GIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNG-ACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIHAAKCD 249 (294)
T ss_pred CCceeeccCCcccccccccccccCCCccccCHHHhCC-CCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHHHhHHH
Confidence 9987653211 11223468999999999876 6789999999999999999999999987633222111110 0
Q ss_pred -cCCCCCCcccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhc
Q 035861 234 -LGTPTETIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALN 305 (332)
Q Consensus 234 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 305 (332)
....... ....+..+..+.++++.|++.+|++||+..++++
T Consensus 250 ~~~~~~~~-------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~ 291 (294)
T PHA02882 250 FIKRLHEG-------------------------------KIKIKNANKFIYDFIECVTKLSYEEKPDYDALIK 291 (294)
T ss_pred HHHHhhhh-------------------------------hhccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHH
Confidence 0000000 0011225788999999999999999999999875
No 365
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=2.2e-38 Score=270.56 Aligned_cols=244 Identities=26% Similarity=0.434 Sum_probs=188.4
Q ss_pred ccccccCcEEEEEEEECCCC------cEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCC
Q 035861 17 NKISEGTYGIVYRARDKKSG------EIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHD 90 (332)
Q Consensus 17 ~~lg~g~~g~v~~~~~~~~~------~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 90 (332)
+.||.|++|.||+|+..... ..+++|.+........ ...+.+|+..++.++||||+++++++... .
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~-------~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-~ 72 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQE-------KKEFLKEAHLMSNFNHPNIVKLLGVCLLN-E 72 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccchhh-------HHHHHHHHHHHHhcCCCCeeeEeeeecCC-C
Confidence 36899999999999986433 6799998754321111 12467899999999999999999998544 6
Q ss_pred eEEEEcccccc-cHHHHHHhc------CCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCC-----cEEE
Q 035861 91 SVYMVMEYMEH-DLKWLMESM------KQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQG-----VLKI 158 (332)
Q Consensus 91 ~~~lv~e~~~~-~l~~~~~~~------~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~-----~~~l 158 (332)
..++|+|+++| ++.+.+... ...+++..+..++.|++.||+|||+.+++|+||+|+||+++.++ .+++
T Consensus 73 ~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~~~~l 152 (269)
T cd05044 73 PQYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVVKI 152 (269)
T ss_pred CeEEEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCCCCCcceEE
Confidence 78999999986 555554431 23478899999999999999999999999999999999999887 8999
Q ss_pred eecccccccCCCC--CCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcC
Q 035861 159 CDFGMSRQYGSPL--KPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA-KKPLFSGTTEVDQIDKIFKTLG 235 (332)
Q Consensus 159 ~df~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~llt-g~~pf~~~~~~~~~~~~~~~~~ 235 (332)
+|||++....... .......++..|+|||.+.+ ..++.++|+||||+++|+|++ |..||...+..+....+....
T Consensus 153 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~- 230 (269)
T cd05044 153 GDFGLARDIYKSDYYRKEGEGLLPVRWMAPESLLD-GKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEVLQHVTAGG- 230 (269)
T ss_pred CCcccccccccccccccCcccCCCccccCHHHHcc-CCcccchhHHHHHHHHHHHHHcCCCCCcccCHHHHHHHHhcCC-
Confidence 9999987542211 11123345678999999977 668999999999999999998 999998776655444332110
Q ss_pred CCCCCcccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhc
Q 035861 236 TPTETIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALN 305 (332)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 305 (332)
....+..++..+.+||.+||+.+|.+||++.++++
T Consensus 231 -----------------------------------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 265 (269)
T cd05044 231 -----------------------------------RLQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQE 265 (269)
T ss_pred -----------------------------------ccCCcccchHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 00112236788999999999999999999999875
No 366
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-40 Score=264.76 Aligned_cols=264 Identities=23% Similarity=0.344 Sum_probs=207.3
Q ss_pred cccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhC-CCCCeeeeeeeEEcCCC
Q 035861 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSF-DHPSIVNVKEVVMDDHD 90 (332)
Q Consensus 12 ~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~ 90 (332)
+.+-++.||.|+||+|++..++.+|+..|||.++.....++. .+++.|.+..++- ++|||++++|..+.+ +
T Consensus 65 ~Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq-------~rll~e~d~~mks~~cp~IVkfyGa~F~E-G 136 (361)
T KOG1006|consen 65 NLQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQ-------KRLLMEHDTVMKSSNCPNIVKFYGALFSE-G 136 (361)
T ss_pred hHHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHH-------HHHHHHHHHHHhhcCCcHHHHHhhhhhcC-C
Confidence 556778899999999999999999999999999876542221 2466777776655 799999999999776 6
Q ss_pred eEEEEcccccccHHHHHH----hcCCCCCHHHHHHHHHHHHHHHHHHH-HCCcccccCCCCCEEEcCCCcEEEeeccccc
Q 035861 91 SVYMVMEYMEHDLKWLME----SMKQPFSTSEVKCLMLQLLEGVKYLH-DNWVLHRDLKTSNLLLNNQGVLKICDFGMSR 165 (332)
Q Consensus 91 ~~~lv~e~~~~~l~~~~~----~~~~~l~~~~~~~i~~~l~~~L~~lh-~~~i~H~di~p~Nili~~~~~~~l~df~~~~ 165 (332)
..||-||.+.-++..... ..+..++|..+-.|......||.||. +.+|+|||+||+|||++..|.+||+|||.+.
T Consensus 137 dcWiCMELMd~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~G~vKLCDFGIcG 216 (361)
T KOG1006|consen 137 DCWICMELMDISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDRHGDVKLCDFGICG 216 (361)
T ss_pred ceeeeHHHHhhhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEecCCCEeeecccchH
Confidence 688999999977644332 23567999999999999999999999 5689999999999999999999999999997
Q ss_pred ccCCCCCCCccccccccccchhhhcCCCC-CCchhHHHHHHHHHHHHHhCCCCCCCC-ChHHHHHHHHHHcCCCCCCccc
Q 035861 166 QYGSPLKPYTSLVVTLWYRAPELLLGAKK-YSTAVDMWSVGCIMAELLAKKPLFSGT-TEVDQIDKIFKTLGTPTETIWP 243 (332)
Q Consensus 166 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~sDi~slG~~l~~lltg~~pf~~~-~~~~~~~~~~~~~~~~~~~~~~ 243 (332)
..... -..+...|...|+|||.+..... ++.+||+||||++|||++||..||..- +..+.+..+..+.++.......
T Consensus 217 qLv~S-iAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~Vv~gdpp~l~~~~~ 295 (361)
T KOG1006|consen 217 QLVDS-IAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQVVIGDPPILLFDKE 295 (361)
T ss_pred hHHHH-HHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHHHHHHHHHHcCCCCeecCccc
Confidence 66332 22234467778999999976555 899999999999999999999999753 3334444443332211111100
Q ss_pred CCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCCCC
Q 035861 244 GLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVPLP 315 (332)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~ 315 (332)
.-.++..++.+|..||.+|-..||.-.+++++||+..-...
T Consensus 296 -------------------------------~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~~fyr~y~~~ 336 (361)
T KOG1006|consen 296 -------------------------------CVHYSFSMVRFINTCLIKDRSDRPKYDDLKKFPFYRMYAVE 336 (361)
T ss_pred -------------------------------ccccCHHHHHHHHHHhhcccccCcchhhhhcCchhhhhhhc
Confidence 11278899999999999999999999999999999876543
No 367
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=4.9e-38 Score=268.47 Aligned_cols=250 Identities=20% Similarity=0.306 Sum_probs=184.2
Q ss_pred ccccccCcEEEEEEEECC--CCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCCeEEE
Q 035861 17 NKISEGTYGIVYRARDKK--SGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHDSVYM 94 (332)
Q Consensus 17 ~~lg~g~~g~v~~~~~~~--~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~l 94 (332)
+.||+|+||+||+|.... ....+++|.+........ ...+.+|+..++.++|+||+++++.+.. ....++
T Consensus 1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~-------~~~~~~e~~~~~~l~h~nii~~~~~~~~-~~~~~l 72 (269)
T cd05042 1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDE-------QLLFLQEVQPYRELNHPNVLQCLGQCIE-SIPYLL 72 (269)
T ss_pred CcCCccCCceEEEEEEecCCCCeEEEEeecCccCChHH-------HHHHHHHHHHHHhCCCCCcceEEEEECC-CCceEE
Confidence 369999999999997532 345688887654321111 1145689999999999999999998844 477899
Q ss_pred Eccccccc-HHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCC
Q 035861 95 VMEYMEHD-LKWLMESMK----QPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGS 169 (332)
Q Consensus 95 v~e~~~~~-l~~~~~~~~----~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~ 169 (332)
||||++++ +.+.+.... ...++..+..++.||+.||+|||++|++|+||||+||+++.++.++|+|||.+.....
T Consensus 73 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~ 152 (269)
T cd05042 73 VLEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQLTADLSVKIGDYGLALEQYP 152 (269)
T ss_pred EEEeCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEecCCCcEEEecccccccccc
Confidence 99999864 544444422 2246788899999999999999999999999999999999999999999998865322
Q ss_pred CC--CCCccccccccccchhhhcC------CCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCCCCCC
Q 035861 170 PL--KPYTSLVVTLWYRAPELLLG------AKKYSTAVDMWSVGCIMAELLA-KKPLFSGTTEVDQIDKIFKTLGTPTET 240 (332)
Q Consensus 170 ~~--~~~~~~~~~~~y~aPE~~~~------~~~~~~~sDi~slG~~l~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~ 240 (332)
.. .......++..|+|||++.. ...++.++|+||||+++|+|++ |..||......+...............
T Consensus 153 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 232 (269)
T cd05042 153 EDYYITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVREQDIKLPK 232 (269)
T ss_pred chheeccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhccCccCCC
Confidence 11 11123345667999999753 2456889999999999999999 788888776665555443321111000
Q ss_pred cccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcC
Q 035861 241 IWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNH 306 (332)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 306 (332)
......++..+.+++..|+ .||++||++++|++-
T Consensus 233 -------------------------------~~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~ 266 (269)
T cd05042 233 -------------------------------PQLDLKYSDRWYEVMQFCW-LDPETRPTAEEVHEL 266 (269)
T ss_pred -------------------------------CcccccCCHHHHHHHHHHh-cCcccccCHHHHHHH
Confidence 0012236788889999998 599999999999863
No 368
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=6.8e-38 Score=267.60 Aligned_cols=249 Identities=20% Similarity=0.265 Sum_probs=183.7
Q ss_pred ccccccCcEEEEEEEEC--CCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCCeEEE
Q 035861 17 NKISEGTYGIVYRARDK--KSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHDSVYM 94 (332)
Q Consensus 17 ~~lg~g~~g~v~~~~~~--~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~l 94 (332)
+.||+|+||.||+|... .++..+++|.+........ ...+.+|+..+++++||||+++++.+. +....++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~-------~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~~l 72 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQE-------QMKFLEEAQPYRSLQHSNLLQCLGQCT-EVTPYLL 72 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHH-------HHHHHHHHHHHHhCCCCCEeeEEEEEc-CCCCcEE
Confidence 36899999999999864 3556799998765432111 114668999999999999999999884 4467899
Q ss_pred Eccccccc-HHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCC
Q 035861 95 VMEYMEHD-LKWLMESM----KQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGS 169 (332)
Q Consensus 95 v~e~~~~~-l~~~~~~~----~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~ 169 (332)
||||++++ +.+.+... ....++..+..++.|++.||+|||+.|++|+||||+||+++.++.++|+|||.+.....
T Consensus 73 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~ 152 (269)
T cd05087 73 VMEFCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYK 152 (269)
T ss_pred EEECCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEECCccccccccC
Confidence 99999964 44444432 12457778889999999999999999999999999999999999999999998865422
Q ss_pred CCC--CCccccccccccchhhhcCC------CCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCCCCCC
Q 035861 170 PLK--PYTSLVVTLWYRAPELLLGA------KKYSTAVDMWSVGCIMAELLA-KKPLFSGTTEVDQIDKIFKTLGTPTET 240 (332)
Q Consensus 170 ~~~--~~~~~~~~~~y~aPE~~~~~------~~~~~~sDi~slG~~l~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~ 240 (332)
... ......++..|+|||++... ..++.++|+||||+++|+|++ |..||......+..............
T Consensus 153 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~- 231 (269)
T cd05087 153 EDYYVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQQLKLP- 231 (269)
T ss_pred cceeecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhcccCCCC-
Confidence 211 12234567789999998542 135789999999999999996 99999876655443332221100000
Q ss_pred cccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhc
Q 035861 241 IWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALN 305 (332)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 305 (332)
........+..+.++++.|+ .+|++||++++|+.
T Consensus 232 ------------------------------~~~~~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~ 265 (269)
T cd05087 232 ------------------------------KPRLKLPLSDRWYEVMQFCW-LQPEQRPSAEEVHL 265 (269)
T ss_pred ------------------------------CCccCCCCChHHHHHHHHHh-cCcccCCCHHHHHH
Confidence 00011225778889999998 68999999999984
No 369
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.3e-39 Score=264.88 Aligned_cols=281 Identities=23% Similarity=0.414 Sum_probs=225.2
Q ss_pred ccchhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhC-CCCCeeeeeeeE
Q 035861 7 CRSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSF-DHPSIVNVKEVV 85 (332)
Q Consensus 7 ~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~ 85 (332)
+..+++|.++..||+|++++|.++....|.+.||+|++++.-...+...+ ....|-.+..+- +||.++-++..+
T Consensus 246 ~l~l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedid-----wvqtek~vfe~asn~pflvglhscf 320 (593)
T KOG0695|consen 246 GLGLQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDID-----WVQTEKHVFEQASNNPFLVGLHSCF 320 (593)
T ss_pred ccccccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccch-----hHHhhHHHHHhccCCCeEEehhhhh
Confidence 34577999999999999999999999999999999999876554443332 233566666554 799999999888
Q ss_pred EcCCCeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeeccccc
Q 035861 86 MDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSR 165 (332)
Q Consensus 86 ~~~~~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~ 165 (332)
+.+..+++|.||++|+-+-....+...++++.+..+...|+.||.|||++||+.+|||.+|+|++..|++||+|+|.++
T Consensus 321 -qtesrlffvieyv~ggdlmfhmqrqrklpeeharfys~ei~lal~flh~rgiiyrdlkldnvlldaeghikltdygmck 399 (593)
T KOG0695|consen 321 -QTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCK 399 (593)
T ss_pred -cccceEEEEEEEecCcceeeehhhhhcCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEEccCCceeecccchhh
Confidence 5558899999999975433333447889999999999999999999999999999999999999999999999999998
Q ss_pred ccCCCCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCC-------CChHHHHHHHH-HHcCCC
Q 035861 166 QYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSG-------TTEVDQIDKIF-KTLGTP 237 (332)
Q Consensus 166 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~-------~~~~~~~~~~~-~~~~~~ 237 (332)
.--.+...-.+.+||+.|.|||.+++ ..|.++.|.|+||++|+||+.|+.||.- .+..+.+-+++ ...-..
T Consensus 400 e~l~~gd~tstfcgtpnyiapeilrg-eeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilekqiri 478 (593)
T KOG0695|consen 400 EGLGPGDTTSTFCGTPNYIAPEILRG-EEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEKQIRI 478 (593)
T ss_pred cCCCCCcccccccCCCcccchhhhcc-cccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhhcccc
Confidence 76555566678899999999999998 7899999999999999999999999963 12222222221 111111
Q ss_pred CCCcccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCC------CHHHHhcCCCCCC
Q 035861 238 TETIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRI------TVDDALNHYWFHE 311 (332)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp------s~~ell~hp~f~~ 311 (332)
+..+|-.+..+++..|.+||.+|. .+.++-.|+||..
T Consensus 479 -------------------------------------prslsvkas~vlkgflnkdp~erlgc~~~~g~~dik~h~ffr~ 521 (593)
T KOG0695|consen 479 -------------------------------------PRSLSVKASHVLKGFLNKDPKERLGCRPQTGFSDIKSHAFFRS 521 (593)
T ss_pred -------------------------------------cceeehhhHHHHHHhhcCCcHHhcCCCcccchhhhhcchhhhh
Confidence 111566677899999999999997 5789999999999
Q ss_pred CCCCCCC--CCCCCCCCccccC
Q 035861 312 VPLPKSK--DFMPTFPPQHARN 331 (332)
Q Consensus 312 ~~~~~~~--~~~~~~~~~~~~~ 331 (332)
+.|.-.+ .-.|+|.|+.+.+
T Consensus 522 idwd~leqk~v~ppf~p~i~~d 543 (593)
T KOG0695|consen 522 IDWDLLEQKQVLPPFQPQITDD 543 (593)
T ss_pred CCHHHHhhcccCCCCCCccccc
Confidence 9988764 4678888887653
No 370
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=5.4e-38 Score=268.77 Aligned_cols=251 Identities=22% Similarity=0.347 Sum_probs=191.3
Q ss_pred ccccccccccCcEEEEEEEEC---CCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCC
Q 035861 13 FEKLNKISEGTYGIVYRARDK---KSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDH 89 (332)
Q Consensus 13 y~~~~~lg~g~~g~v~~~~~~---~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 89 (332)
|.+.+.||+|++|.||+|.+. .++..+|||++.......... ..+.+|+..+++++|||++++++++....
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~------~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 74 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDI------EEFLREAACMKEFDHPNVIKLIGVSLRSR 74 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHH------HHHHHHHHHHhcCCCCCcceEEEEEccCC
Confidence 678899999999999999864 357899999996543222111 13568999999999999999999875432
Q ss_pred -----CeEEEEcccccccH-HHHHHhc-----CCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEE
Q 035861 90 -----DSVYMVMEYMEHDL-KWLMESM-----KQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKI 158 (332)
Q Consensus 90 -----~~~~lv~e~~~~~l-~~~~~~~-----~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l 158 (332)
...+++++|+.++. ...+... ...++...+..++.|++.||+|||++|++|+||+|+||+++.++.++|
T Consensus 75 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili~~~~~~kl 154 (273)
T cd05074 75 AKGRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLNENMTVCV 154 (273)
T ss_pred CCCcccceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEEcCCCCEEE
Confidence 12478889988644 3333221 124789999999999999999999999999999999999999999999
Q ss_pred eecccccccCCCCC--CCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcC
Q 035861 159 CDFGMSRQYGSPLK--PYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA-KKPLFSGTTEVDQIDKIFKTLG 235 (332)
Q Consensus 159 ~df~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~llt-g~~pf~~~~~~~~~~~~~~~~~ 235 (332)
+|||.+........ ......++..|++||.+.. ..++.++|+||||+++|++++ |..||...+..+....+.....
T Consensus 155 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~ 233 (273)
T cd05074 155 ADFGLSKKIYSGDYYRQGCASKLPVKWLALESLAD-NVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNYLIKGNR 233 (273)
T ss_pred CcccccccccCCcceecCCCccCchhhcCHhHHhc-CccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHcCCc
Confidence 99999876532211 1122334567999999876 567889999999999999999 8899877665544443332110
Q ss_pred CCCCCcccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcC
Q 035861 236 TPTETIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNH 306 (332)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 306 (332)
....+..+..+.+++.+||+.+|++||++.+++.+
T Consensus 234 ------------------------------------~~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~ 268 (273)
T cd05074 234 ------------------------------------LKQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQ 268 (273)
T ss_pred ------------------------------------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 01112367889999999999999999999999864
No 371
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-39 Score=276.36 Aligned_cols=272 Identities=27% Similarity=0.396 Sum_probs=220.4
Q ss_pred cchhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEc
Q 035861 8 RSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMD 87 (332)
Q Consensus 8 ~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~ 87 (332)
.+.++|-++..||+|||+.||++.+...++.||+|+-.......+. ...+..+...+|..+-+.|.||.|+++++++.-
T Consensus 460 tLn~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdE-KKeNYhKHAcREyrIHKeLDHpRIVKlYDyfsl 538 (775)
T KOG1151|consen 460 TLNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDE-KKENYHKHACREYRIHKELDHPRIVKLYDYFSL 538 (775)
T ss_pred chHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhH-hhhhHHHHHHHHHhhhhccCcceeeeeeeeeee
Confidence 3456899999999999999999999999999999998665443322 222233345689999999999999999999977
Q ss_pred CCCeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--cccccCCCCCEEEcC---CCcEEEeecc
Q 035861 88 DHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNW--VLHRDLKTSNLLLNN---QGVLKICDFG 162 (332)
Q Consensus 88 ~~~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~--i~H~di~p~Nili~~---~~~~~l~df~ 162 (332)
+....|-|+|||+|+-++...+.++.+++.++..|+.||..||.||.+.. |+|.||||.|||+-. -|.+||+|||
T Consensus 539 DtdsFCTVLEYceGNDLDFYLKQhklmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKITDFG 618 (775)
T KOG1151|consen 539 DTDSFCTVLEYCEGNDLDFYLKQHKLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKITDFG 618 (775)
T ss_pred ccccceeeeeecCCCchhHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEeeecc
Confidence 77889999999999888888888899999999999999999999999765 999999999999854 3689999999
Q ss_pred cccccCCCCCC-------CccccccccccchhhhcCC---CCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHH
Q 035861 163 MSRQYGSPLKP-------YTSLVVTLWYRAPELLLGA---KKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFK 232 (332)
Q Consensus 163 ~~~~~~~~~~~-------~~~~~~~~~y~aPE~~~~~---~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~ 232 (332)
++...+..... -....||.||.|||.+.-+ ...+.+.||||+||++|.++.|+-||+.......+. .
T Consensus 619 LSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdIL---q 695 (775)
T KOG1151|consen 619 LSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDIL---Q 695 (775)
T ss_pred hhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHHH---h
Confidence 99887543322 1235689999999998643 457889999999999999999999998764433222 1
Q ss_pred HcCCCCCCcccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCC
Q 035861 233 TLGTPTETIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHE 311 (332)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~ 311 (332)
...... .....++..|.+++++++||++||++--++|..+.++..||||.-
T Consensus 696 eNTIlk----------------------------AtEVqFP~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~dpyllP 746 (775)
T KOG1151|consen 696 ENTILK----------------------------ATEVQFPPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLACDPYLLP 746 (775)
T ss_pred hhchhc----------------------------ceeccCCCCCccCHHHHHHHHHHHHhhhhhhhhHHHHccCccccc
Confidence 111000 012335556779999999999999999999999999999999975
No 372
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=100.00 E-value=3.4e-39 Score=262.79 Aligned_cols=292 Identities=35% Similarity=0.545 Sum_probs=232.7
Q ss_pred chhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcC
Q 035861 9 SVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDD 88 (332)
Q Consensus 9 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 88 (332)
...+|.-++.+|.|.- .|..+.+.-++++|++|.+......... ..+..+|..++..+.|+||+.++.++...
T Consensus 15 v~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~------akra~rel~l~~~v~~~nii~l~n~ftP~ 87 (369)
T KOG0665|consen 15 VPKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTH------AKRAYRELKLMKCVNHKNIISLLNVFTPQ 87 (369)
T ss_pred eeeeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCcc------chhhhhhhhhhhhhcccceeeeeeccCcc
Confidence 4568999999999999 8888989889999999998765332222 22456899999999999999999998432
Q ss_pred -----CCeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeeccc
Q 035861 89 -----HDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGM 163 (332)
Q Consensus 89 -----~~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~ 163 (332)
....|+|||++.+++...+. -.++-+.+..+++|++.|+.|||+.||+||||||+||++..++.+||.|||+
T Consensus 88 ~~l~~~~e~y~v~e~m~~nl~~vi~---~elDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~~~~~lKi~dfg~ 164 (369)
T KOG0665|consen 88 KTLEEFQEVYLVMELMDANLCQVIL---MELDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVNSDCTLKILDFGL 164 (369)
T ss_pred ccHHHHHhHHHHHHhhhhHHHHHHH---HhcchHHHHHHHHHHHHHHHHHHhcceeecccCcccceecchhheeeccchh
Confidence 13479999999999877666 3478889999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCccc
Q 035861 164 SRQYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWP 243 (332)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (332)
++..+.. -..+....+..|+|||++.+ ..+....||||+||++.||++|...|.+....+.+.++...++.+....+.
T Consensus 165 ar~e~~~-~~mtpyVvtRyyrapevil~-~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~ 242 (369)
T KOG0665|consen 165 ARTEDTD-FMMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMK 242 (369)
T ss_pred hcccCcc-cccCchhheeeccCchheec-cCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHH
Confidence 9876443 35566788999999999988 459999999999999999999999999999999999999999988877655
Q ss_pred CCCCCccccc-cccCCchhhhhhhCCCCccCC----CCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCC
Q 035861 244 GLSELPGAKA-NFAKQPYNLLRKRFPAASFTG----SPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEV 312 (332)
Q Consensus 244 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~ 312 (332)
.+........ ...+...-...+.+|+..+.. ++.-+..+++|+.+||..||++|.|+.++|+||||+-|
T Consensus 243 qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~HPY~~vw 316 (369)
T KOG0665|consen 243 QLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRHPYIKVW 316 (369)
T ss_pred HhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcCCeeeee
Confidence 4443222111 111111122233444443322 22345568899999999999999999999999999955
No 373
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=5.8e-38 Score=270.06 Aligned_cols=266 Identities=24% Similarity=0.356 Sum_probs=195.5
Q ss_pred hcccccccccccCcEEEEEEEEC----CCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEE
Q 035861 11 FEFEKLNKISEGTYGIVYRARDK----KSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVM 86 (332)
Q Consensus 11 ~~y~~~~~lg~g~~g~v~~~~~~----~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~ 86 (332)
.+|++.+.||+|+||.||++... .++..+|+|++...... .....+.+|+..++.+.|+||+++++++.
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~-------~~~~~~~~ei~~l~~l~~~~i~~~~~~~~ 76 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEE-------QHRSDFEREIEILRTLDHENIVKYKGVCE 76 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccch-------HHHHHHHHHHHHHHhCCCCChheEEeeee
Confidence 47889999999999999999864 34789999998754332 01124678999999999999999999874
Q ss_pred c-CCCeEEEEcccccc-cHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccc
Q 035861 87 D-DHDSVYMVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMS 164 (332)
Q Consensus 87 ~-~~~~~~lv~e~~~~-~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~ 164 (332)
. +....+++|||+++ ++.+.+......+++..+..++.|++.||++||++|++|+||+|+||+++.++.++|+|||.+
T Consensus 77 ~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~ 156 (284)
T cd05038 77 KPGGRSLRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILVESEDLVKISDFGLA 156 (284)
T ss_pred cCCCCceEEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEcccccc
Confidence 4 24578999999986 555555554456999999999999999999999999999999999999999999999999998
Q ss_pred cccCCCCCC---CccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCc
Q 035861 165 RQYGSPLKP---YTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETI 241 (332)
Q Consensus 165 ~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 241 (332)
......... .....++..|+|||.+.+ ..++.++|+||||+++|+|++|..|+......... +. +...
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~-~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~--~~---~~~~--- 227 (284)
T cd05038 157 KVLPEDKDYYYVKEPGESPIFWYAPECLRT-SKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLR--MI---GIAQ--- 227 (284)
T ss_pred cccccCCcceeccCCCCCcccccCcHHHcc-CCCCcccchHHHhhhhheeeccCCCcccccchhcc--cc---cccc---
Confidence 876422211 112234556999999876 57899999999999999999999998653221100 00 0000
Q ss_pred ccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhc
Q 035861 242 WPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALN 305 (332)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 305 (332)
.......................++.++.+|+.+||+.+|++||++.||++
T Consensus 228 -------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 278 (284)
T cd05038 228 -------------GQMIVTRLLELLKEGERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLIL 278 (284)
T ss_pred -------------ccccHHHHHHHHHcCCcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence 000000000000011111222346788999999999999999999999986
No 374
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=100.00 E-value=2.1e-39 Score=252.56 Aligned_cols=286 Identities=26% Similarity=0.480 Sum_probs=217.0
Q ss_pred chhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCC-CCCeeeeeeeEEc
Q 035861 9 SVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFD-HPSIVNVKEVVMD 87 (332)
Q Consensus 9 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~ 87 (332)
..++|++++++|+|.++.||.|....++++++||+++.-.. +.+.+|+.+|..|. +|||+.+.++..+
T Consensus 36 ~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVkk-----------kKIkREikIL~nL~gg~NIi~L~DiV~D 104 (338)
T KOG0668|consen 36 NQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVKK-----------KKIKREIKILQNLRGGPNIIKLLDIVKD 104 (338)
T ss_pred ccchHHHHHHHcCccHhhHhcccccCCCceEEEeeechHHH-----------HHHHHHHHHHHhccCCCCeeehhhhhcC
Confidence 56799999999999999999999999999999999975332 14679999999995 9999999999854
Q ss_pred C-CCeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCC-cEEEeeccccc
Q 035861 88 D-HDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQG-VLKICDFGMSR 165 (332)
Q Consensus 88 ~-~~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~-~~~l~df~~~~ 165 (332)
. .....+|+|+++..-...+ -..++...+..++.+|+.||.|+|+.||.|+|+||.|++|+... .++|+|||+|.
T Consensus 105 p~SktpaLiFE~v~n~Dfk~l---y~tl~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmIdh~~rkLrlIDWGLAE 181 (338)
T KOG0668|consen 105 PESKTPSLIFEYVNNTDFKQL---YPTLTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMIDHELRKLRLIDWGLAE 181 (338)
T ss_pred ccccCchhHhhhhccccHHHH---hhhhchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeechhhceeeeeecchHh
Confidence 3 2457899999987543333 34688999999999999999999999999999999999999654 79999999999
Q ss_pred ccCCCCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCC-CCChHHHHHHHHHHcCCCCCCcccC
Q 035861 166 QYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFS-GTTEVDQIDKIFKTLGTPTETIWPG 244 (332)
Q Consensus 166 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~-~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (332)
+.... ..+....-+..|.-||.+..-..++.+-|+|||||++..|+..+.||. +.+..+.+-++.+-++..--. .-
T Consensus 182 FYHp~-~eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~--~Y 258 (338)
T KOG0668|consen 182 FYHPG-KEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELY--AY 258 (338)
T ss_pred hcCCC-ceeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHH--HH
Confidence 87543 444555667789999999988889999999999999999999888875 456666776666654422100 00
Q ss_pred CCCCccccccccC--------CchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCCCCC
Q 035861 245 LSELPGAKANFAK--------QPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVPLPK 316 (332)
Q Consensus 245 ~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~~ 316 (332)
+ .......+. .+...-........ .--+++++.+|+.++|..|..+|+|+.|.+.||||..+....
T Consensus 259 l---~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n---~hl~~peaiDlldklLrYDHqeRlTakEam~HpyF~~~~~~~ 332 (338)
T KOG0668|consen 259 L---NKYQIDLDPQFEDILGRHSRKPWSRFINSEN---QHLVSPEAIDLLDKLLRYDHQERLTAKEAMAHPYFAPVREAE 332 (338)
T ss_pred H---HHHccCCChhHhhHhhccccccHHHhCCccc---cccCChHHHHHHHHHHhhccccccchHHHhcCchHHHHHHHh
Confidence 0 000111111 11111111111111 111578999999999999999999999999999998766544
Q ss_pred C
Q 035861 317 S 317 (332)
Q Consensus 317 ~ 317 (332)
.
T Consensus 333 ~ 333 (338)
T KOG0668|consen 333 S 333 (338)
T ss_pred h
Confidence 3
No 375
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-38 Score=289.28 Aligned_cols=259 Identities=25% Similarity=0.429 Sum_probs=218.1
Q ss_pred hcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhC-CCCCeeeeeeeEEc--
Q 035861 11 FEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSF-DHPSIVNVKEVVMD-- 87 (332)
Q Consensus 11 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~-- 87 (332)
+.|++++.||.|.+|.||+++...+++..|+|++.......+ .+..|.++++.+ .|||++.+++++.-
T Consensus 19 d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~de---------EiE~eynil~~~~~hpnv~~fyg~~~k~~ 89 (953)
T KOG0587|consen 19 DIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDEEE---------EIELEYNMLKKYSHHPNVATFYGAFIKKD 89 (953)
T ss_pred CccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCccccH---------HHHHHHHHHHhccCCCCcceEEEEEEEec
Confidence 478999999999999999999999999999999987654433 455788888887 79999999999853
Q ss_pred --CCCeEEEEcccccccHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeeccc
Q 035861 88 --DHDSVYMVMEYMEHDLKWLMESM--KQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGM 163 (332)
Q Consensus 88 --~~~~~~lv~e~~~~~l~~~~~~~--~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~ 163 (332)
.++.+|+|||+|+|++...+.+. ...+.|+.+..|++.++.||.|||.+.++|+|||-.|||++.++.|||.|||.
T Consensus 90 ~~~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLLT~e~~VKLvDFGv 169 (953)
T KOG0587|consen 90 PGNGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLLTENAEVKLVDFGV 169 (953)
T ss_pred CCCCCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEEeccCcEEEeeeee
Confidence 34789999999998665555432 46699999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCccccccccccchhhhcCCC----CCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCC
Q 035861 164 SRQYGSPLKPYTSLVVTLWYRAPELLLGAK----KYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTE 239 (332)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~----~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~ 239 (332)
+...++......+..||++|||||++.+.. .++..+|+||||++..||.-|.+|+.+......+-.+-+ .
T Consensus 170 SaQldsT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmraLF~IpR---N--- 243 (953)
T KOG0587|consen 170 SAQLDSTVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPR---N--- 243 (953)
T ss_pred eeeeecccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhhhccCCC---C---
Confidence 999988888888999999999999997533 467799999999999999999999988766544333211 1
Q ss_pred CcccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCC
Q 035861 240 TIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEV 312 (332)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~ 312 (332)
|...+..+...+..+-+||..||.+|-+.||+..++|+|||++.-
T Consensus 244 ----------------------------PPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~hpFi~e~ 288 (953)
T KOG0587|consen 244 ----------------------------PPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLKHPFITEQ 288 (953)
T ss_pred ----------------------------CCccccchhhHHHHHHHHHHHHHhhccccCcchhhhccCCccccc
Confidence 122223344578899999999999999999999999999999843
No 376
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=6.8e-39 Score=281.83 Aligned_cols=276 Identities=25% Similarity=0.381 Sum_probs=221.9
Q ss_pred cccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCCe
Q 035861 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHDS 91 (332)
Q Consensus 12 ~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 91 (332)
.|..++.||-|+||.|.++....|...||.|.+++..- ..++.......|-.+|..-..+-|++++..| ++..+
T Consensus 630 mFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDV-----l~rnQvaHVKAERDILAEADn~WVVrLyySF-QDkdn 703 (1034)
T KOG0608|consen 630 MFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADV-----LMRNQVAHVKAERDILAEADNEWVVRLYYSF-QDKDN 703 (1034)
T ss_pred ceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHH-----HhhhhhhhhhhhhhhHhhcCCcceEEEEEEe-ccCCc
Confidence 68899999999999999999999999999999976432 2222233445788889888999999999999 66689
Q ss_pred EEEEcccccc-cHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCCC
Q 035861 92 VYMVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSP 170 (332)
Q Consensus 92 ~~lv~e~~~~-~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~~ 170 (332)
+|+||+|++| ++...++. -+-|.|..++.++..+..|+++.|+.|++|+||||+|||||.+|++||+|||+|+-+..-
T Consensus 704 LYFVMdYIPGGDmMSLLIr-mgIFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWT 782 (1034)
T KOG0608|consen 704 LYFVMDYIPGGDMMSLLIR-MGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWT 782 (1034)
T ss_pred eEEEEeccCCccHHHHHHH-hccCHHHHHHHHHHHHHHHHHHHHhccceecccCccceEEccCCceeeeeccccccceec
Confidence 9999999997 45555555 678999999999999999999999999999999999999999999999999998632100
Q ss_pred --------C-----C-----------------------------CCccccccccccchhhhcCCCCCCchhHHHHHHHHH
Q 035861 171 --------L-----K-----------------------------PYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIM 208 (332)
Q Consensus 171 --------~-----~-----------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l 208 (332)
. + ......||+-|+|||++.. ..++...|.||.||+|
T Consensus 783 HdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r-~g~~q~cdwws~gvil 861 (1034)
T KOG0608|consen 783 HDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLAR-TGYTQLCDWWSVGVIL 861 (1034)
T ss_pred cccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcc-cCccccchhhHhhHHH
Confidence 0 0 0113467888999999987 5689999999999999
Q ss_pred HHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHH
Q 035861 209 AELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNR 288 (332)
Q Consensus 209 ~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 288 (332)
|+|+.|..||-+....++..++++.... .-.....++|.+..+||.+
T Consensus 862 ~em~~g~~pf~~~tp~~tq~kv~nw~~~---------------------------------l~~~~~~~ls~e~~~li~k 908 (1034)
T KOG0608|consen 862 YEMLVGQPPFLADTPGETQYKVINWRNF---------------------------------LHIPYQGNLSKEALDLIQK 908 (1034)
T ss_pred HHHhhCCCCccCCCCCcceeeeeehhhc---------------------------------cccccccccCHHHHHHHHH
Confidence 9999999999888776665555432110 0011122378999999998
Q ss_pred hcCCCCCCCC---CHHHHhcCCCCCCCCCCCCCCCCCCCCCccc
Q 035861 289 LLTYDPEKRI---TVDDALNHYWFHEVPLPKSKDFMPTFPPQHA 329 (332)
Q Consensus 289 ~l~~dp~~Rp---s~~ell~hp~f~~~~~~~~~~~~~~~~~~~~ 329 (332)
++. +++.|. .+++|-.||||+.|.+.+.+....+|.|.++
T Consensus 909 Lc~-sad~RLGkng~d~vKaHpfFkgIDfsslRkq~ApYIP~It 951 (1034)
T KOG0608|consen 909 LCC-SADSRLGKNGADQVKAHPFFKGIDFSSLRKQRAPYIPRIT 951 (1034)
T ss_pred Hhc-ChhhhhcccchhhhhcCccccccchHhhhhccCCcCcccc
Confidence 765 467777 4778999999999999999999999999875
No 377
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=4.2e-38 Score=276.40 Aligned_cols=246 Identities=25% Similarity=0.443 Sum_probs=201.8
Q ss_pred cccccccccccCcEEEEEEEECCC--C--cEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEc
Q 035861 12 EFEKLNKISEGTYGIVYRARDKKS--G--EIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMD 87 (332)
Q Consensus 12 ~y~~~~~lg~g~~g~v~~~~~~~~--~--~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~ 87 (332)
.....+.||.|-||.||.|..... | -.||||+.+....... ...|+.|+.+++.++||||++++|++.+
T Consensus 390 ~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~-------tekflqEa~iMrnfdHphIikLIGv~~e 462 (974)
T KOG4257|consen 390 LITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDD-------TEKFLQEASIMRNFDHPHIIKLIGVCVE 462 (974)
T ss_pred hccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhh-------HHHHHHHHHHHHhCCCcchhheeeeeec
Confidence 345667899999999999987532 3 3588888876443322 2268899999999999999999999943
Q ss_pred CCCeEEEEccccc-ccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccc
Q 035861 88 DHDSVYMVMEYME-HDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQ 166 (332)
Q Consensus 88 ~~~~~~lv~e~~~-~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~ 166 (332)
...|||||.++ |.+...+..+...++...+..+++||+.||+|||+.+++||||-..||||.....|||+|||+++.
T Consensus 463 --~P~WivmEL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVsSp~CVKLaDFGLSR~ 540 (974)
T KOG4257|consen 463 --QPMWIVMELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILVSSPQCVKLADFGLSRY 540 (974)
T ss_pred --cceeEEEecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheeecCcceeeecccchhhh
Confidence 45899999999 788888888888899999999999999999999999999999999999999999999999999987
Q ss_pred cCCCCCCCcccc--ccccccchhhhcCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCCCCCCccc
Q 035861 167 YGSPLKPYTSLV--VTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA-KKPLFSGTTEVDQIDKIFKTLGTPTETIWP 243 (332)
Q Consensus 167 ~~~~~~~~~~~~--~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (332)
.+... .+.... -+.-|+|||.+.- ..++.+||+|.||++|||++. |..||.+....+.+..+
T Consensus 541 ~ed~~-yYkaS~~kLPIKWmaPESINf-RrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~~i------------- 605 (974)
T KOG4257|consen 541 LEDDA-YYKASRGKLPIKWMAPESINF-RRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIGHI------------- 605 (974)
T ss_pred ccccc-hhhccccccceeecCccccch-hcccchhhHHHHHHHHHHHHHhcCCccccccccceEEEe-------------
Confidence 75432 222222 3556999999876 789999999999999999987 89999886655443322
Q ss_pred CCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHh
Q 035861 244 GLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDAL 304 (332)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell 304 (332)
....+++.++.+++.+..|+.+||+++|.+||.+.+|.
T Consensus 606 -----------------------EnGeRlP~P~nCPp~LYslmskcWayeP~kRPrftei~ 643 (974)
T KOG4257|consen 606 -----------------------ENGERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIK 643 (974)
T ss_pred -----------------------cCCCCCCCCCCCChHHHHHHHHHhccCcccCCcHHHHH
Confidence 23566777888999999999999999999999776653
No 378
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=9.1e-37 Score=260.50 Aligned_cols=249 Identities=21% Similarity=0.301 Sum_probs=182.9
Q ss_pred ccccccCcEEEEEEEECCC--CcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCCeEEE
Q 035861 17 NKISEGTYGIVYRARDKKS--GEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHDSVYM 94 (332)
Q Consensus 17 ~~lg~g~~g~v~~~~~~~~--~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~l 94 (332)
+.||+|+||+||++..... ...+++|.+........ ...+.+|+..++.++|||++++++.+.. ....++
T Consensus 1 ~~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~-------~~~~~~e~~~~~~l~h~~iv~~~~~~~~-~~~~~l 72 (268)
T cd05086 1 QEIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKE-------QNEFLQQGDPYRILQHPNILQCLGQCVE-AIPYLL 72 (268)
T ss_pred CcCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHH-------HHHHHHHHHHHhccCCcchhheEEEecC-CCccEE
Confidence 3699999999999975432 33466666654322111 1256789999999999999999999854 477899
Q ss_pred Ecccccc-cHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCCC
Q 035861 95 VMEYMEH-DLKWLMESM---KQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSP 170 (332)
Q Consensus 95 v~e~~~~-~l~~~~~~~---~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~~ 170 (332)
||||+++ ++.+.+... ....++..+..++.||+.||+|||+.+++|+||||+||+++.++.++|+|||.+......
T Consensus 73 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~ 152 (268)
T cd05086 73 VFEYCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKE 152 (268)
T ss_pred EEecCCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEcCCccEEecccccccccCcc
Confidence 9999996 444444432 234677788999999999999999999999999999999999999999999987543211
Q ss_pred --CCCCccccccccccchhhhcC------CCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCCCCCCc
Q 035861 171 --LKPYTSLVVTLWYRAPELLLG------AKKYSTAVDMWSVGCIMAELLA-KKPLFSGTTEVDQIDKIFKTLGTPTETI 241 (332)
Q Consensus 171 --~~~~~~~~~~~~y~aPE~~~~------~~~~~~~sDi~slG~~l~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 241 (332)
........++..|+|||++.. ...++.++|+||||+++|+|++ +..||......+....+.........
T Consensus 153 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~-- 230 (268)
T cd05086 153 DYIETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQQVKLF-- 230 (268)
T ss_pred hhhhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhcccccC--
Confidence 112234567888999998753 1235789999999999999997 57788777766655555433111100
Q ss_pred ccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhc
Q 035861 242 WPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALN 305 (332)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 305 (332)
. ......+++.+.+++..|+ .+|++||++++|++
T Consensus 231 ---------------------------~--~~~~~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~ 264 (268)
T cd05086 231 ---------------------------K--PQLELPYSERWYEVLQFCW-LSPEKRATAEEVHR 264 (268)
T ss_pred ---------------------------C--CccCCCCcHHHHHHHHHHh-hCcccCCCHHHHHH
Confidence 0 0011226788899999999 67999999999975
No 379
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1e-37 Score=277.12 Aligned_cols=257 Identities=25% Similarity=0.375 Sum_probs=215.3
Q ss_pred hcccccccccccCcEEEEEEEECC---CCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEc
Q 035861 11 FEFEKLNKISEGTYGIVYRARDKK---SGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMD 87 (332)
Q Consensus 11 ~~y~~~~~lg~g~~g~v~~~~~~~---~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~ 87 (332)
.+....+.||+|+||.|++|.|+. +...||||.+....... ...+|++|+..|.+|+|+|++++||++.+
T Consensus 110 e~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~-------~mddflrEas~M~~L~H~hliRLyGvVl~ 182 (1039)
T KOG0199|consen 110 EQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNA-------IMDDFLREASHMLKLQHPHLIRLYGVVLD 182 (1039)
T ss_pred HHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccch-------hHHHHHHHHHHHHhccCcceeEEeeeecc
Confidence 466788899999999999999974 33479999998655432 22368899999999999999999999954
Q ss_pred CCCeEEEEccccc-ccHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeeccccc
Q 035861 88 DHDSVYMVMEYME-HDLKWLMES-MKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSR 165 (332)
Q Consensus 88 ~~~~~~lv~e~~~-~~l~~~~~~-~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~ 165 (332)
.-.-+|+|.++ |+|++.+.+ ....|....+..++.|||.|+.||..+++||+||-..|+++-....|||+|||+.+
T Consensus 183 --qp~mMV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNlllasprtVKI~DFGLmR 260 (1039)
T KOG0199|consen 183 --QPAMMVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLASPRTVKICDFGLMR 260 (1039)
T ss_pred --chhhHHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheecccceeeeeccccee
Confidence 44679999999 567777766 34668899999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCcc---ccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCCCCCCc
Q 035861 166 QYGSPLKPYTS---LVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA-KKPLFSGTTEVDQIDKIFKTLGTPTETI 241 (332)
Q Consensus 166 ~~~~~~~~~~~---~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 241 (332)
..+.+...+.. ......|+|||.+.. ..++.+||+|++||+||||+| |..||.+....+.+.++-.
T Consensus 261 aLg~ned~Yvm~p~rkvPfAWCaPEsLrh-~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~qIL~~iD~--------- 330 (1039)
T KOG0199|consen 261 ALGENEDMYVMAPQRKVPFAWCAPESLRH-RKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQILKNIDA--------- 330 (1039)
T ss_pred ccCCCCcceEecCCCcCcccccCHhHhcc-ccccccchhhhhhhhHHhhhccCCCCCCCCCHHHHHHhccc---------
Confidence 88665554422 234567999999988 789999999999999999998 8899999988887776642
Q ss_pred ccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCC
Q 035861 242 WPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVP 313 (332)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~ 313 (332)
.+++..++.+++.+.+++.+||..+|++||++..|.+.-+.....
T Consensus 331 ---------------------------~erLpRPk~csedIY~imk~cWah~paDRptFsair~~~~l~eaq 375 (1039)
T KOG0199|consen 331 ---------------------------GERLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIREDLVLAEAQ 375 (1039)
T ss_pred ---------------------------cccCCCCCCChHHHHHHHHHhccCCccccccHHHHHHhHHHHhcC
Confidence 344555666899999999999999999999999998776665543
No 380
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=100.00 E-value=2.4e-37 Score=286.66 Aligned_cols=279 Identities=20% Similarity=0.268 Sum_probs=177.1
Q ss_pred cchhcccccccccccCcEEEEEEEECCC----CcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeee
Q 035861 8 RSVFEFEKLNKISEGTYGIVYRARDKKS----GEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKE 83 (332)
Q Consensus 8 ~~~~~y~~~~~lg~g~~g~v~~~~~~~~----~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~ 83 (332)
...++|++.+.||+|+||+||+|.+..+ +..||+|++....... . ...+.++...+.++..+..
T Consensus 129 ~~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~~e-----------~-~~~e~l~~~~~~~~~~~~~ 196 (566)
T PLN03225 129 FKKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGAVE-----------I-WMNERVRRACPNSCADFVY 196 (566)
T ss_pred CccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccchhH-----------H-HHHHHHHhhchhhHHHHHH
Confidence 3567999999999999999999999988 8999999875321100 0 0111112222222222211
Q ss_pred eE-----EcCCCeEEEEcccccccH-HHHHHhcCCC-------------------CCHHHHHHHHHHHHHHHHHHHHCCc
Q 035861 84 VV-----MDDHDSVYMVMEYMEHDL-KWLMESMKQP-------------------FSTSEVKCLMLQLLEGVKYLHDNWV 138 (332)
Q Consensus 84 ~~-----~~~~~~~~lv~e~~~~~l-~~~~~~~~~~-------------------l~~~~~~~i~~~l~~~L~~lh~~~i 138 (332)
.+ .......++|+||++++. .+.+...... .....+..++.||+.||+|||++||
T Consensus 197 ~~~~~~~~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gI 276 (566)
T PLN03225 197 GFLEPVSSKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGI 276 (566)
T ss_pred hhhcccccccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCE
Confidence 11 134467899999998754 4444322111 1234567899999999999999999
Q ss_pred ccccCCCCCEEEcC-CCcEEEeecccccccCCCC-CCCccccccccccchhhhcCCC---------------------CC
Q 035861 139 LHRDLKTSNLLLNN-QGVLKICDFGMSRQYGSPL-KPYTSLVVTLWYRAPELLLGAK---------------------KY 195 (332)
Q Consensus 139 ~H~di~p~Nili~~-~~~~~l~df~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~---------------------~~ 195 (332)
+|+||||+|||++. ++.+||+|||++....... .......+++.|+|||.+.... .+
T Consensus 277 iHRDLKP~NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~ 356 (566)
T PLN03225 277 VHRDVKPQNIIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNL 356 (566)
T ss_pred EeCcCCHHHEEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccC
Confidence 99999999999986 5799999999997653221 2224557889999999764311 13
Q ss_pred CchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCCccccccccCCchhhhhhhCCCCccCCC
Q 035861 196 STAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGS 275 (332)
Q Consensus 196 ~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (332)
+.++||||||+++|+|+++..++. .........+...+.....+...... ... ...... ....
T Consensus 357 ~~k~DVwSlGviL~el~~~~~~~~--~~~~~~~~~l~~~~~~~~~~~~~~~~---------~~~-~~~~~~-----~~~~ 419 (566)
T PLN03225 357 PDRFDIYSAGLIFLQMAFPNLRSD--SNLIQFNRQLKRNDYDLVAWRKLVEP---------RAS-PDLRRG-----FEVL 419 (566)
T ss_pred CCCcccHHHHHHHHHHHhCcCCCc--hHHHHHHHHHHhcCCcHHHHHHhhcc---------ccc-hhhhhh-----hhhc
Confidence 345699999999999998776543 22223333332221111111000000 000 000000 0000
Q ss_pred CCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCCCC
Q 035861 276 PVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVPLP 315 (332)
Q Consensus 276 ~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~ 315 (332)
...+....+||.+||+.||++|||+.++|+||||......
T Consensus 420 d~~~~~~~dLi~~mL~~dP~kR~ta~e~L~Hpff~~~~~~ 459 (566)
T PLN03225 420 DLDGGAGWELLKSMMRFKGRQRISAKAALAHPYFDREGLL 459 (566)
T ss_pred cccchHHHHHHHHHccCCcccCCCHHHHhCCcCcCCCCcc
Confidence 1123456699999999999999999999999999986654
No 381
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-38 Score=286.99 Aligned_cols=250 Identities=28% Similarity=0.404 Sum_probs=194.4
Q ss_pred ccccccccccCcEE-EEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhC-CCCCeeeeeeeEEcCCC
Q 035861 13 FEKLNKISEGTYGI-VYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSF-DHPSIVNVKEVVMDDHD 90 (332)
Q Consensus 13 y~~~~~lg~g~~g~-v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~ 90 (332)
|.-.+.+|.|+.|+ ||+|... ++.||||.+-..... -..+|+..++.. .||||+++++.- .++.
T Consensus 511 ~~~~eilG~Gs~Gt~Vf~G~ye--~R~VAVKrll~e~~~-----------~A~rEi~lL~eSD~H~NviRyyc~E-~d~q 576 (903)
T KOG1027|consen 511 FSPKEILGYGSNGTVVFRGVYE--GREVAVKRLLEEFFD-----------FAQREIQLLQESDEHPNVIRYYCSE-QDRQ 576 (903)
T ss_pred eccHHHcccCCCCcEEEEEeeC--CceehHHHHhhHhHH-----------HHHHHHHHHHhccCCCceEEEEeec-cCCc
Confidence 34456789999986 8999887 889999998654321 234899999888 799999999987 6669
Q ss_pred eEEEEcccccccHHHHHHhc--CCCC-CHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcC---C--CcEEEeecc
Q 035861 91 SVYMVMEYMEHDLKWLMESM--KQPF-STSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNN---Q--GVLKICDFG 162 (332)
Q Consensus 91 ~~~lv~e~~~~~l~~~~~~~--~~~l-~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~---~--~~~~l~df~ 162 (332)
+.||..|.|..+|.+.+... .... .....+.+..|++.||+|||+.+|+||||||.||||+. + .+++|+|||
T Consensus 577 F~YIalELC~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfg 656 (903)
T KOG1027|consen 577 FLYIALELCACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLKIVHRDLKPQNILISVPSADGTLRAKISDFG 656 (903)
T ss_pred eEEEEehHhhhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcccccccCCCceEEEEccCCCcceeEEecccc
Confidence 99999999999999888773 1111 22556788999999999999999999999999999986 3 379999999
Q ss_pred cccccCCCCC---CCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhC-CCCCCCCChHHHHHHHHHHcCCCC
Q 035861 163 MSRQYGSPLK---PYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAK-KPLFSGTTEVDQIDKIFKTLGTPT 238 (332)
Q Consensus 163 ~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg-~~pf~~~~~~~~~~~~~~~~~~~~ 238 (332)
+|+....... ...+..||..|+|||.+.. ..-+.+.|||||||++|+.++| .+||++.-..+. .|......
T Consensus 657 lsKkl~~~~sS~~r~s~~sGt~GW~APE~L~~-~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~--NIl~~~~~-- 731 (903)
T KOG1027|consen 657 LSKKLAGGKSSFSRLSGGSGTSGWQAPEQLRE-DRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQA--NILTGNYT-- 731 (903)
T ss_pred cccccCCCcchhhcccCCCCcccccCHHHHhc-cccCcccchhhcCceEEEEecCCccCCCchHHhhh--hhhcCccc--
Confidence 9998854433 3456788999999999987 4457799999999999999996 999987643321 22211100
Q ss_pred CCcccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCC
Q 035861 239 ETIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVP 313 (332)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~ 313 (332)
-..+ .+.-..++.+||.+|++++|..||+|.+||.||+|=+.+
T Consensus 732 ------------------------------L~~L--~~~~d~eA~dLI~~ml~~dP~~RPsa~~VL~HPlFW~~e 774 (903)
T KOG1027|consen 732 ------------------------------LVHL--EPLPDCEAKDLISRMLNPDPQLRPSATDVLNHPLFWDSE 774 (903)
T ss_pred ------------------------------eeee--ccCchHHHHHHHHHhcCCCcccCCCHHHHhCCCccCChH
Confidence 0001 111122788999999999999999999999999996654
No 382
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-38 Score=283.38 Aligned_cols=251 Identities=27% Similarity=0.432 Sum_probs=214.4
Q ss_pred hcccccccccccCcEEEEEEEECCCCc---EEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEc
Q 035861 11 FEFEKLNKISEGTYGIVYRARDKKSGE---IVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMD 87 (332)
Q Consensus 11 ~~y~~~~~lg~g~~g~v~~~~~~~~~~---~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~ 87 (332)
+...+.+.||.|.||.|++|+.+..++ .||||.++.....++. ..|+.|+.+|-++.||||+.+.|+. .
T Consensus 629 s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~Gytekqr-------rdFL~EAsIMGQFdHPNIIrLEGVV-T 700 (996)
T KOG0196|consen 629 SCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQR-------RDFLSEASIMGQFDHPNIIRLEGVV-T 700 (996)
T ss_pred hheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHH-------hhhhhhhhhcccCCCCcEEEEEEEE-e
Confidence 356788899999999999999887664 6999999865443322 2678999999999999999999999 4
Q ss_pred CCCeEEEEcccccc-cHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccc
Q 035861 88 DHDSVYMVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQ 166 (332)
Q Consensus 88 ~~~~~~lv~e~~~~-~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~ 166 (332)
...-..||+||++. .|...++.+++.|+..++..|++.|+.|+.||-+.|++||||-..||||+.+-..|++|||+++.
T Consensus 701 ks~PvMIiTEyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILVNsnLvCKVsDFGLSRv 780 (996)
T KOG0196|consen 701 KSKPVMIITEYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILVNSNLVCKVSDFGLSRV 780 (996)
T ss_pred cCceeEEEhhhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheeeccceEEEeccccceee
Confidence 44778899999995 56667777788999999999999999999999999999999999999999999999999999998
Q ss_pred cCCCC-CCCccc--cccccccchhhhcCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCCCCCCcc
Q 035861 167 YGSPL-KPYTSL--VVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA-KKPLFSGTTEVDQIDKIFKTLGTPTETIW 242 (332)
Q Consensus 167 ~~~~~-~~~~~~--~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 242 (332)
..+.. ..+++. ..+.+|.|||.+.- ..++.+||+||+|++|||.++ |..||.+..+.+.++.+..+.
T Consensus 781 ledd~~~~ytt~GGKIPiRWTAPEAIa~-RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQdVIkaIe~gy-------- 851 (996)
T KOG0196|consen 781 LEDDPEAAYTTLGGKIPIRWTAPEAIAY-RKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEQGY-------- 851 (996)
T ss_pred cccCCCccccccCCccceeecChhHhhh-cccCchhhccccceEEEEecccCCCcccccchHHHHHHHHhcc--------
Confidence 75443 223332 23578999999987 789999999999999999887 999999999999988887654
Q ss_pred cCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcC
Q 035861 243 PGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNH 306 (332)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 306 (332)
+++++.+++..+.+|+..||++|=.+||.+.+|+.+
T Consensus 852 ----------------------------RLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~ 887 (996)
T KOG0196|consen 852 ----------------------------RLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVST 887 (996)
T ss_pred ----------------------------CCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHH
Confidence 344455589999999999999999999999999875
No 383
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-37 Score=273.09 Aligned_cols=246 Identities=22% Similarity=0.366 Sum_probs=208.2
Q ss_pred cccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCCe
Q 035861 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHDS 91 (332)
Q Consensus 12 ~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 91 (332)
++....+||.|-+|.||.|.|+...-.||||.++.+....+ .|+.|+.+|+.+.|||+++++|+| ..+.-
T Consensus 268 dItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtMeve---------EFLkEAAvMKeikHpNLVqLLGVC-T~EpP 337 (1157)
T KOG4278|consen 268 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE---------EFLKEAAVMKEIKHPNLVQLLGVC-THEPP 337 (1157)
T ss_pred heeeeeccCCCcccceeeeeeeccceeeehhhhhhcchhHH---------HHHHHHHHHHhhcCccHHHHhhhh-ccCCC
Confidence 55677899999999999999999888999999976654333 578999999999999999999999 44467
Q ss_pred EEEEccccc-ccHHHHHHhcCCC-CCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCC
Q 035861 92 VYMVMEYME-HDLKWLMESMKQP-FSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGS 169 (332)
Q Consensus 92 ~~lv~e~~~-~~l~~~~~~~~~~-l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~ 169 (332)
.|||+||+. |+|++.++.+++. ++...++.|+.||..|++||.+++++|+||-..|.||.++..||+.|||+++.+..
T Consensus 338 FYIiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLVgEnhiVKvADFGLsRlMtg 417 (1157)
T KOG4278|consen 338 FYIITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHIVKVADFGLSRLMTG 417 (1157)
T ss_pred eEEEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhccccccceEEeeccchhhhhcC
Confidence 899999987 7999999988754 78888999999999999999999999999999999999999999999999998754
Q ss_pred CC-CCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCC
Q 035861 170 PL-KPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA-KKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSE 247 (332)
Q Consensus 170 ~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (332)
.. ....+....+-|.|||.+.- ..++.+||+|+||++|||++| |-.||.+-+..+.+..+.++
T Consensus 418 DTYTAHAGAKFPIKWTAPEsLAy-NtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSqVY~LLEkg-------------- 482 (1157)
T KOG4278|consen 418 DTYTAHAGAKFPIKWTAPESLAY-NTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYGLLEKG-------------- 482 (1157)
T ss_pred CceecccCccCcccccCcccccc-cccccchhhHHHHHHHHHHHhcCCCCCCCccHHHHHHHHhcc--------------
Confidence 22 22223344667999999987 679999999999999999998 88999888776666655443
Q ss_pred CccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHh
Q 035861 248 LPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDAL 304 (332)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell 304 (332)
.+-..+..+++.+.+|+++||++.|.+||++.|+-
T Consensus 483 ----------------------yRM~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiH 517 (1157)
T KOG4278|consen 483 ----------------------YRMDGPEGCPPKVYELMRACWNWSPSDRPSFAEIH 517 (1157)
T ss_pred ----------------------ccccCCCCCCHHHHHHHHHHhcCCcccCccHHHHH
Confidence 23333455899999999999999999999998874
No 384
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=100.00 E-value=2.8e-36 Score=253.15 Aligned_cols=242 Identities=42% Similarity=0.666 Sum_probs=193.6
Q ss_pred CcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCCeEEEEcccccc-
Q 035861 23 TYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEH- 101 (332)
Q Consensus 23 ~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~lv~e~~~~- 101 (332)
++|.||+|.+..+++.+++|++........ ...+.+|+..+++++|++++++.+.+..+ ...++++|++++
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~-------~~~~~~e~~~~~~l~~~~i~~~~~~~~~~-~~~~l~~e~~~~~ 72 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKK-------RERILREISILKKLKHPNIVRLYDVFEDE-DKLYLVMEYCDGG 72 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccH-------HHHHHHHHHHHHhCCCCcHHHHHhheeeC-CEEEEEEeCCCCC
Confidence 589999999998899999999976543221 12567899999999999999999998554 788999999998
Q ss_pred cHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCCCCCCCccccccc
Q 035861 102 DLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTL 181 (332)
Q Consensus 102 ~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~ 181 (332)
++...+.. ...+++..++.++.+++.++++||+.|++|+||+|.||+++.++.++++|||.+...... .......++.
T Consensus 73 ~L~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~-~~~~~~~~~~ 150 (244)
T smart00220 73 DLFDLLKK-RGRLSEDEARFYARQILSALEYLHSNGIIHRDLKPENILLDEDGHVKLADFGLARQLDPG-GLLTTFVGTP 150 (244)
T ss_pred CHHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEECCCCcEEEccccceeeeccc-cccccccCCc
Confidence 55554443 445899999999999999999999999999999999999999999999999998876432 1334556788
Q ss_pred cccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCC-ChHHHHHHHHHHcCCCCCCcccCCCCCccccccccCCch
Q 035861 182 WYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGT-TEVDQIDKIFKTLGTPTETIWPGLSELPGAKANFAKQPY 260 (332)
Q Consensus 182 ~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (332)
.|+|||.+.. ..++.++|+||||++++++++|..||... .................
T Consensus 151 ~~~~pE~~~~-~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~---------------------- 207 (244)
T smart00220 151 EYMAPEVLLG-KGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPFP---------------------- 207 (244)
T ss_pred CCCCHHHHcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCCCCc----------------------
Confidence 8999999875 56788999999999999999999999773 33333222221111000
Q ss_pred hhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCC
Q 035861 261 NLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWF 309 (332)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f 309 (332)
.....++.++.+++.+|+..+|++||++.++++||||
T Consensus 208 ------------~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~~~~~~~ 244 (244)
T smart00220 208 ------------PPEWKISPEAKDLIRKLLVKDPEKRLTAEEALQHPFF 244 (244)
T ss_pred ------------cccccCCHHHHHHHHHHccCCchhccCHHHHhhCCCC
Confidence 0001157889999999999999999999999999997
No 385
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-36 Score=258.11 Aligned_cols=290 Identities=31% Similarity=0.431 Sum_probs=207.1
Q ss_pred hcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCC-----C---CCeeeee
Q 035861 11 FEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFD-----H---PSIVNVK 82 (332)
Q Consensus 11 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-----h---~~i~~~~ 82 (332)
.+|.+.++||.|-|+|||++.+..+.+.||+|+.+......+ ..+.|+++|++++ + ..|++++
T Consensus 78 gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAqhYtE---------aAlDEIklL~~v~~~Dp~~~~~~~VV~Ll 148 (590)
T KOG1290|consen 78 GRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQHYTE---------AALDEIKLLQQVREGDPNDPGKKCVVQLL 148 (590)
T ss_pred ceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhhHHHH---------HHHHHHHHHHHHHhcCCCCCCCceeeeee
Confidence 599999999999999999999999999999999975544333 4568999999883 2 4588888
Q ss_pred eeEE---cCCCeEEEEcccccccHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHH-HCCcccccCCCCCEEEcCC----
Q 035861 83 EVVM---DDHDSVYMVMEYMEHDLKWLMESMK-QPFSTSEVKCLMLQLLEGVKYLH-DNWVLHRDLKTSNLLLNNQ---- 153 (332)
Q Consensus 83 ~~~~---~~~~~~~lv~e~~~~~l~~~~~~~~-~~l~~~~~~~i~~~l~~~L~~lh-~~~i~H~di~p~Nili~~~---- 153 (332)
+.|. .+..+.|+|+|+++.+|+..+..++ +.++...++.|++|++.||.||| +.||+|-||||+|||+..+
T Consensus 149 D~FkhsGpNG~HVCMVfEvLGdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPENvLl~~~e~~~ 228 (590)
T KOG1290|consen 149 DHFKHSGPNGQHVCMVFEVLGDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRECGIIHTDLKPENVLLCSTEIDP 228 (590)
T ss_pred ccceecCCCCcEEEEEehhhhhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhcCccccCCCcceeeeeccccch
Confidence 8873 3457899999999999999998765 56999999999999999999999 5799999999999998300
Q ss_pred -------C------------------------------------------------------------------------
Q 035861 154 -------G------------------------------------------------------------------------ 154 (332)
Q Consensus 154 -------~------------------------------------------------------------------------ 154 (332)
+
T Consensus 229 ~~~~~~a~e~~~~~p~~s~s~~~t~~d~~~~~~~~~~s~~~~k~~~kk~~r~~~~~~~~l~~~~~~~~~~~~~s~n~~~~ 308 (590)
T KOG1290|consen 229 AKDAREAGEATTSLPKMSPSAVSTRPDALQRMAAEPMSKSKFKKMKKKLKRQAKKLEASLAGLEGIEEEPNQESYNNEPR 308 (590)
T ss_pred hhhhhhhccccccCCCCCcccccccccccchhhccccchhhHHHHHHHHhhhhhhhhhhhcccccccccccccccccccC
Confidence 0
Q ss_pred --------------------------------------------------------------------------------
Q 035861 155 -------------------------------------------------------------------------------- 154 (332)
Q Consensus 155 -------------------------------------------------------------------------------- 154 (332)
T Consensus 309 ~n~~~~~v~~~~~~~~~~~~~~~~n~~~k~~e~~~~~~~sl~~~~~~~~~t~~~~~~~s~~s~~~~~~n~~v~p~~~~~~ 388 (590)
T KOG1290|consen 309 INGNESTVERSTLEEDSNENGNRENLPIKSPENFRGNNTSLPESQLRDSATPSDGSLSSPSSPGTIASNPLVNPDIPLPE 388 (590)
T ss_pred CCccccchhhcccccccccccCCccccccCccccccccccccchhcccccccccccccCcCCccccccccccCCCCCCCc
Confidence
Q ss_pred ---cEEEeecccccccCCCCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCC------CChHH
Q 035861 155 ---VLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSG------TTEVD 225 (332)
Q Consensus 155 ---~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~------~~~~~ 225 (332)
++||.|||.|.-. ...++..+.|.-|+|||++.+ ..|+..+||||++|+++||+||...|.. ..+.+
T Consensus 389 ~di~vKIaDlGNACW~---~khFT~DIQTRQYRapEVllG-sgY~~~ADiWS~AC~~FELaTGDyLFePhsG~~Y~rDED 464 (590)
T KOG1290|consen 389 CDIRVKIADLGNACWV---HKHFTEDIQTRQYRAPEVLLG-SGYSTSADIWSTACMAFELATGDYLFEPHSGENYSRDED 464 (590)
T ss_pred cceeEEEeeccchhhh---hhhhchhhhhhhccCcceeec-CCCCCchhHHHHHHHHHHhhcCceeecCCCCCCCCccHH
Confidence 0111222211100 011122233455999999998 6799999999999999999999999964 34667
Q ss_pred HHHHHHHHcCCCCCCcccCCC---CCcccccccc---CCchhhhhhhC-CCCccCCCCCCCchHHHHHHHhcCCCCCCCC
Q 035861 226 QIDKIFKTLGTPTETIWPGLS---ELPGAKANFA---KQPYNLLRKRF-PAASFTGSPVLSESGFDLLNRLLTYDPEKRI 298 (332)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~---~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp 298 (332)
.+..|+..++..|....-+-. ++-+....+. +-....+.+.+ .... -+..-..++.+|+.-||+.+|++||
T Consensus 465 HiA~i~ELLG~iPr~ia~~Gk~SRdFFnr~G~LrhI~~LK~WpL~~VL~eKY~--~s~e~A~~fsdFL~PmLef~PeKR~ 542 (590)
T KOG1290|consen 465 HIALIMELLGKIPRKIALGGKYSRDFFNRRGELRHIRRLKPWPLYEVLIEKYE--WSEEDAQQFSDFLSPMLEFDPEKRP 542 (590)
T ss_pred HHHHHHHHHhhccHHHHhcCcchHhhhccccceecccccCCCcHHHHHHHHhC--CCHHHHHHHHHHHHHHHhcCccccc
Confidence 788888887776644322110 0111111110 00000000000 0000 0111245677999999999999999
Q ss_pred CHHHHhcCCCCCCCCCC
Q 035861 299 TVDDALNHYWFHEVPLP 315 (332)
Q Consensus 299 s~~ell~hp~f~~~~~~ 315 (332)
||.+.|+|||++.+..+
T Consensus 543 tA~~cl~hPwLn~~~~~ 559 (590)
T KOG1290|consen 543 TAAQCLKHPWLNPVAGP 559 (590)
T ss_pred cHHHHhcCccccCCCCC
Confidence 99999999999998876
No 386
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=9.2e-37 Score=266.13 Aligned_cols=255 Identities=26% Similarity=0.386 Sum_probs=205.2
Q ss_pred cccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCCe
Q 035861 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHDS 91 (332)
Q Consensus 12 ~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 91 (332)
...+.++||+|-||.|.++.-.. +.+||||+++....... ..++.+|+++|.+|+||||+.++++|..+ +.
T Consensus 539 ~L~~~ekiGeGqFGEVhLCeveg-~lkVAVK~Lr~~a~~~~-------r~~F~kEIkiLsqLkhPNIveLvGVC~~D-eP 609 (807)
T KOG1094|consen 539 RLRFKEKIGEGQFGEVHLCEVEG-PLKVAVKILRPDATKNA-------RNDFLKEIKILSRLKHPNIVELLGVCVQD-DP 609 (807)
T ss_pred heehhhhhcCcccceeEEEEecC-ceEEEEeecCcccchhH-------HHHHHHHHHHHhccCCCCeeEEEeeeecC-Cc
Confidence 45688999999999999998863 68999999986554332 23688999999999999999999999777 77
Q ss_pred EEEEcccccc-cHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCC
Q 035861 92 VYMVMEYMEH-DLKWLMESMK-QPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGS 169 (332)
Q Consensus 92 ~~lv~e~~~~-~l~~~~~~~~-~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~ 169 (332)
+++|+||++. ++...+.+.. ..+......+|+.||+.|++||.+.+++||||.+.|+|+++++++||+|||.++..-+
T Consensus 610 icmI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lys 689 (807)
T KOG1094|consen 610 LCMITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLVDGEFTIKIADFGMSRNLYS 689 (807)
T ss_pred hHHHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhchhhccccccceeecCcccEEecCccccccccc
Confidence 9999999995 5555555432 2346677788999999999999999999999999999999999999999999986532
Q ss_pred CC--CCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHh--CCCCCCCCChHHHHHHHHHHcCCCCCCcccCC
Q 035861 170 PL--KPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA--KKPLFSGTTEVDQIDKIFKTLGTPTETIWPGL 245 (332)
Q Consensus 170 ~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~llt--g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (332)
.. .......-+.+|+|||.+.. +.++.+||+|++|+++||+++ ...||....+.+..+..........
T Consensus 690 g~yy~vqgr~vlpiRwmawEsill-gkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~~~~~~~~~------- 761 (807)
T KOG1094|consen 690 GDYYRVQGRAVLPIRWMAWESILL-GKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENAGEFFRDQG------- 761 (807)
T ss_pred CCceeeecceeeeeeehhHHHHHh-ccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhhhhhcCCCC-------
Confidence 21 11223344688999999987 789999999999999999875 7899988887776665544332222
Q ss_pred CCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhc
Q 035861 246 SELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALN 305 (332)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 305 (332)
+...+..++.++..+.+|+-+||..|-.+||+++++-.
T Consensus 762 ----------------------~~~~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~ 799 (807)
T KOG1094|consen 762 ----------------------RQVVLSRPPACPQGLYELMLRCWRRESEQRPSFEQLHL 799 (807)
T ss_pred ----------------------cceeccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHH
Confidence 22334455668999999999999999999999999854
No 387
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-37 Score=276.79 Aligned_cols=205 Identities=31% Similarity=0.472 Sum_probs=172.9
Q ss_pred hcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcC--
Q 035861 11 FEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDD-- 88 (332)
Q Consensus 11 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-- 88 (332)
+-+.--+.||+|+||.||+|+++.+|+.||||+++........ .....|++++++++|+||++++++-.+.
T Consensus 13 y~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~-------e~~~~EieilkKLnh~NIVk~f~iee~~~~ 85 (732)
T KOG4250|consen 13 YLWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPR-------ERWCREIEILKKLNHPNIVKLFDIEETKFL 85 (732)
T ss_pred cceeehhhhcCCccceeeeecccccccchhHHhhhhhcccchH-------HHHHHHHHHHHHcCchhhhhhcccCCcccc
Confidence 4567778899999999999999999999999999876533322 2456899999999999999999986322
Q ss_pred ---CCeEEEEcccccccHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcC--CC--cEEE
Q 035861 89 ---HDSVYMVMEYMEHDLKWLMESMK---QPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNN--QG--VLKI 158 (332)
Q Consensus 89 ---~~~~~lv~e~~~~~l~~~~~~~~---~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~--~~--~~~l 158 (332)
.....+|||||.|+.+....... ..+++.+.+.++.++..||.|||++||+||||||.||++.. +| .-||
T Consensus 86 ~~~~~~~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKL 165 (732)
T KOG4250|consen 86 GLVTRLPVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQSIYKL 165 (732)
T ss_pred CcccccceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCCCceEEee
Confidence 13467999999986655554432 45999999999999999999999999999999999999853 33 5899
Q ss_pred eecccccccCCCCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCh
Q 035861 159 CDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTE 223 (332)
Q Consensus 159 ~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~ 223 (332)
+|||.|+..+.+. ......||+.|.+||.+...+.++...|.||+|+++|+++||..||-....
T Consensus 166 tDfG~Arel~d~s-~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~ 229 (732)
T KOG4250|consen 166 TDFGAARELDDNS-LFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGG 229 (732)
T ss_pred ecccccccCCCCC-eeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCC
Confidence 9999999886553 678889999999999998668899999999999999999999999965433
No 388
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=100.00 E-value=1e-37 Score=268.75 Aligned_cols=294 Identities=28% Similarity=0.420 Sum_probs=224.2
Q ss_pred ccccchhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCC------CCe
Q 035861 5 QGCRSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDH------PSI 78 (332)
Q Consensus 5 ~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h------~~i 78 (332)
.|-.+-.+|.|....|+|-||+|.+|.+..-|..||||++.....-. +.-+.|+++|++|+. -++
T Consensus 426 igE~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M~---------KtGl~EleiLkKL~~AD~Edk~Hc 496 (752)
T KOG0670|consen 426 IGELLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVMH---------KTGLKELEILKKLNDADPEDKFHC 496 (752)
T ss_pred hhhhhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchHHh---------hhhhHHHHHHHHhhccCchhhhHH
Confidence 45556679999999999999999999999889999999997543211 133589999999953 467
Q ss_pred eeeeeeEEcCCCeEEEEcccccccHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCC-Cc
Q 035861 79 VNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMK--QPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQ-GV 155 (332)
Q Consensus 79 ~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~--~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~-~~ 155 (332)
+.++..| ...+++|+|+|.+.-+|.+.+.... -.+....+..++.||+.||..|..+|++|.||||+||||... ..
T Consensus 497 lrl~r~F-~hknHLClVFE~LslNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVNE~k~i 575 (752)
T KOG0670|consen 497 LRLFRHF-KHKNHLCLVFEPLSLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVNESKNI 575 (752)
T ss_pred HHHHHHh-hhcceeEEEehhhhchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEeccCcce
Confidence 7777777 5558899999999999988887764 457889999999999999999999999999999999999875 47
Q ss_pred EEEeecccccccCCCCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcC
Q 035861 156 LKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLG 235 (332)
Q Consensus 156 ~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~ 235 (332)
+||||||+|.....+. .+....+..|.|||++.+ -+|++.-|+||+||+|||+.||+..|.+.+..+++...+..-+
T Consensus 576 LKLCDfGSA~~~~ene--itPYLVSRFYRaPEIiLG-~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KG 652 (752)
T KOG0670|consen 576 LKLCDFGSASFASENE--ITPYLVSRFYRAPEIILG-LPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKG 652 (752)
T ss_pred eeeccCcccccccccc--ccHHHHHHhccCcceeec-CcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcC
Confidence 9999999998765432 244456778999999998 7899999999999999999999999999999999888887777
Q ss_pred CCCCCcccCCCC-------Ccc-cccccc--------------CCchhhhhhhCCCCc-cCCCCCCCchHHHHHHHhcCC
Q 035861 236 TPTETIWPGLSE-------LPG-AKANFA--------------KQPYNLLRKRFPAAS-FTGSPVLSESGFDLLNRLLTY 292 (332)
Q Consensus 236 ~~~~~~~~~~~~-------~~~-~~~~~~--------------~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~ 292 (332)
..+......-.- -.+ .....+ ............... ....+.+-..+++|+.+||..
T Consensus 653 k~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~L 732 (752)
T KOG0670|consen 653 KFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLIL 732 (752)
T ss_pred CCcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhcc
Confidence 666443221110 000 000000 011111111111111 111223445788999999999
Q ss_pred CCCCCCCHHHHhcCCCCCC
Q 035861 293 DPEKRITVDDALNHYWFHE 311 (332)
Q Consensus 293 dp~~Rps~~ell~hp~f~~ 311 (332)
||++|.++.++|+||||+.
T Consensus 733 dP~KRit~nqAL~HpFi~~ 751 (752)
T KOG0670|consen 733 DPEKRITVNQALKHPFITE 751 (752)
T ss_pred ChhhcCCHHHHhcCCcccC
Confidence 9999999999999999974
No 389
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.4e-38 Score=252.11 Aligned_cols=286 Identities=37% Similarity=0.667 Sum_probs=225.8
Q ss_pred cccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCC--
Q 035861 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDH-- 89 (332)
Q Consensus 12 ~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-- 89 (332)
+.+-.+.||.|+||.||.+.+..+|+.|++|++..-......+ +.+.+|+.++.-++|.|++...++.....
T Consensus 54 Di~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~------krvFre~kmLcfFkHdNVLSaLDILQPph~d 127 (449)
T KOG0664|consen 54 DIQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASC------KRVFREIKMLSSFRHDNVLSLLDILQPANPS 127 (449)
T ss_pred cCCCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHH------HHHHHHHHHHHhhccccHHHHHHhcCCCCch
Confidence 5667789999999999999999999999999986433222111 24678999999999999999988873332
Q ss_pred --CeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeeccccccc
Q 035861 90 --DSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQY 167 (332)
Q Consensus 90 --~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~ 167 (332)
...|+++|.+..++...+.. ...++...++-+.+||+.||.|||+.||.|+||||.|.+++.+..+||+|||+++..
T Consensus 128 fFqEiYV~TELmQSDLHKIIVS-PQ~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLVNSNCvLKICDFGLARve 206 (449)
T KOG0664|consen 128 FFQELYVLTELMQSDLHKIIVS-PQALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLVNSNCILKICDFGLARTW 206 (449)
T ss_pred HHHHHHHHHHHHHhhhhheecc-CCCCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEeccCceEEeccccccccc
Confidence 23678889998887665554 778999999999999999999999999999999999999999999999999999876
Q ss_pred CCC-CCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCC
Q 035861 168 GSP-LKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLS 246 (332)
Q Consensus 168 ~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (332)
+.. ....+....|..|+|||.+++...|+.+.||||.|+++.|++..+..|...+..+.++-+...++.|..+.+..
T Consensus 207 e~d~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~-- 284 (449)
T KOG0664|consen 207 DQRDRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKY-- 284 (449)
T ss_pred chhhhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHH--
Confidence 432 23445556788999999999999999999999999999999999999999999999999999888777553322
Q ss_pred CCccccccccCCchhhhhhhCCCCcc------CCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCC
Q 035861 247 ELPGAKANFAKQPYNLLRKRFPAASF------TGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVP 313 (332)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~ 313 (332)
-.+......++.......+ .....-..+...++.+++..||+.|.+.++.+.|++.....
T Consensus 285 -------ACEGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~~~e~R 350 (449)
T KOG0664|consen 285 -------ACEGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRYLEEGR 350 (449)
T ss_pred -------HhhhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhcccccccccc
Confidence 1122222222222111110 11112344677899999999999999999999999988765
No 390
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=100.00 E-value=1e-34 Score=262.85 Aligned_cols=280 Identities=20% Similarity=0.288 Sum_probs=183.4
Q ss_pred cchhcccccccccccCcEEEEEEEEC----------------CCCcEEEEEEeecccCCcccc------cccCCCcchhH
Q 035861 8 RSVFEFEKLNKISEGTYGIVYRARDK----------------KSGEIVALKKVKMNVGRKEDC------LEYGFPISSLR 65 (332)
Q Consensus 8 ~~~~~y~~~~~lg~g~~g~v~~~~~~----------------~~~~~v~iK~~~~~~~~~~~~------~~~~~~~~~~~ 65 (332)
...++|++.++||+|+||+||+|... ..++.||||.+.......... ...........
T Consensus 142 ~~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~v 221 (507)
T PLN03224 142 WSSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMV 221 (507)
T ss_pred ccccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHH
Confidence 45679999999999999999999752 234679999986533211000 00111223345
Q ss_pred HHHHHhhCCCCCe-----eeeeeeEEc-------CCCeEEEEccccccc-HHHHHHhcC---------------------
Q 035861 66 EINILLSFDHPSI-----VNVKEVVMD-------DHDSVYMVMEYMEHD-LKWLMESMK--------------------- 111 (332)
Q Consensus 66 e~~~l~~l~h~~i-----~~~~~~~~~-------~~~~~~lv~e~~~~~-l~~~~~~~~--------------------- 111 (332)
|+..+.++.|.++ +.+++++.. .....++|+||++++ +.+.+....
T Consensus 222 E~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~ 301 (507)
T PLN03224 222 EAYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNM 301 (507)
T ss_pred HHHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhc
Confidence 7777777766554 455565532 134689999999864 434333211
Q ss_pred --CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCCCCC-CCccccccccccchhh
Q 035861 112 --QPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLK-PYTSLVVTLWYRAPEL 188 (332)
Q Consensus 112 --~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~~~~-~~~~~~~~~~y~aPE~ 188 (332)
..+++..++.++.|++.+|.|||+.+++|+||||+||+++.++.++|+|||++........ ......+++.|+|||.
T Consensus 302 ~~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aPE~ 381 (507)
T PLN03224 302 PQDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPPEE 381 (507)
T ss_pred ccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeChhh
Confidence 1245677889999999999999999999999999999999999999999999865432211 1112234788999998
Q ss_pred hcCCCC---------------------CCchhHHHHHHHHHHHHHhCCC-CCCCCChHHHHHHHHHHcCCCCCCcccCCC
Q 035861 189 LLGAKK---------------------YSTAVDMWSVGCIMAELLAKKP-LFSGTTEVDQIDKIFKTLGTPTETIWPGLS 246 (332)
Q Consensus 189 ~~~~~~---------------------~~~~sDi~slG~~l~~lltg~~-pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (332)
+..... .....|+||+|+++|+|+++.. ||......... ..........+
T Consensus 382 l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~---~~~~~~~~~~~----- 453 (507)
T PLN03224 382 LVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTE---LRQYDNDLNRW----- 453 (507)
T ss_pred hcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhH---HhhccchHHHH-----
Confidence 754211 1124699999999999999886 66432211110 00000000000
Q ss_pred CCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCC---CCCCCHHHHhcCCCCCC
Q 035861 247 ELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDP---EKRITVDDALNHYWFHE 311 (332)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp---~~Rps~~ell~hp~f~~ 311 (332)
................++..++|+.+||..+| .+|+|++|+|+||||..
T Consensus 454 ----------------r~~~~~~~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~Hp~f~~ 505 (507)
T PLN03224 454 ----------------RMYKGQKYDFSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSHRFFLP 505 (507)
T ss_pred ----------------HhhcccCCCcccccccChHHHHHHHHHhccCCCCcccCCCHHHHhCCCCcCC
Confidence 00000011122233478899999999999866 68999999999999964
No 391
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4.8e-35 Score=264.19 Aligned_cols=248 Identities=24% Similarity=0.373 Sum_probs=209.8
Q ss_pred cccccccccccCcEEEEEEEECCCCc----EEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEc
Q 035861 12 EFEKLNKISEGTYGIVYRARDKKSGE----IVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMD 87 (332)
Q Consensus 12 ~y~~~~~lg~g~~g~v~~~~~~~~~~----~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~ 87 (332)
+.+..+.||+|+||+||+|.+-..++ +||||++......+. ..++++|+..|..++|||++++++++..
T Consensus 697 elkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~-------s~e~LdeAl~masldHpnl~RLLgvc~~ 769 (1177)
T KOG1025|consen 697 ELKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKA-------SIELLDEALRMASLDHPNLLRLLGVCML 769 (1177)
T ss_pred hhhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchh-------hHHHHHHHHHHhcCCCchHHHHhhhccc
Confidence 45667889999999999999976665 688888876554332 2367899999999999999999999955
Q ss_pred CCCeEEEEccccc-ccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccc
Q 035861 88 DHDSVYMVMEYME-HDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQ 166 (332)
Q Consensus 88 ~~~~~~lv~e~~~-~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~ 166 (332)
+. .-||++|++ |.|++.++...+++-....+.|++||++|+.|||+.+++||||-..||||.....+|+.|||+++.
T Consensus 770 s~--~qlvtq~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLVksP~hvkitdfgla~l 847 (1177)
T KOG1025|consen 770 ST--LQLVTQLMPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLVKSPNHVKITDFGLAKL 847 (1177)
T ss_pred ch--HHHHHHhcccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheeecCCCeEEEEecchhhc
Confidence 53 678999999 578888888889999999999999999999999999999999999999999999999999999998
Q ss_pred cCCCCCCCccccc--cccccchhhhcCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCCCCCCccc
Q 035861 167 YGSPLKPYTSLVV--TLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA-KKPLFSGTTEVDQIDKIFKTLGTPTETIWP 243 (332)
Q Consensus 167 ~~~~~~~~~~~~~--~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (332)
.......+....| .+-|+|-|.+.. ..++.+|||||+||++||++| |..|+.+....+.-+.+..
T Consensus 848 l~~d~~ey~~~~gK~pikwmale~i~~-~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~dlle~----------- 915 (1177)
T KOG1025|consen 848 LAPDEKEYSAPGGKVPIKWMALESIRI-RKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPDLLEK----------- 915 (1177)
T ss_pred cCcccccccccccccCcHHHHHHHhhc-cCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhhHHHhc-----------
Confidence 7655555544444 566999999887 789999999999999999999 9999988877665444332
Q ss_pred CCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhc
Q 035861 244 GLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALN 305 (332)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 305 (332)
..++..++.++.++..++.+||..|+..||+++++.+
T Consensus 916 -------------------------geRLsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~ 952 (1177)
T KOG1025|consen 916 -------------------------GERLSQPPICTIDVYMVMVKCWMIDADSRPTFKELAE 952 (1177)
T ss_pred -------------------------cccCCCCCCccHHHHHHHHHHhccCcccCccHHHHHH
Confidence 3446677889999999999999999999999988764
No 392
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-35 Score=257.84 Aligned_cols=209 Identities=26% Similarity=0.417 Sum_probs=181.8
Q ss_pred chhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCC---CCCeeeeeeeE
Q 035861 9 SVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFD---HPSIVNVKEVV 85 (332)
Q Consensus 9 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~---h~~i~~~~~~~ 85 (332)
.+.+|..++.+|.|+||.|++++++.+...|+||.+.+.+.-.+...+....-.+..|+.+|..++ |+||++++++|
T Consensus 559 k~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfF 638 (772)
T KOG1152|consen 559 KFSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFF 638 (772)
T ss_pred ccccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhhee
Confidence 455799999999999999999999999999999999887664444444333345678999999997 99999999999
Q ss_pred EcCCCeEEEEccccccc-HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccc
Q 035861 86 MDDHDSVYMVMEYMEHD-LKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMS 164 (332)
Q Consensus 86 ~~~~~~~~lv~e~~~~~-l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~ 164 (332)
++++++||+||..+.+ -+...+.....++|.++..|+.|++.|+++||+.||+|||||-+|++++.+|.+||+|||++
T Consensus 639 -Eddd~yyl~te~hg~gIDLFd~IE~kp~m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenvivd~~g~~klidfgsa 717 (772)
T KOG1152|consen 639 -EDDDYYYLETEVHGEGIDLFDFIEFKPRMDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIVDSNGFVKLIDFGSA 717 (772)
T ss_pred -ecCCeeEEEecCCCCCcchhhhhhccCccchHHHHHHHHHHHhccccccccCceecccccccEEEecCCeEEEeeccch
Confidence 7779999999998743 23344455788999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCC
Q 035861 165 RQYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSG 220 (332)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~ 220 (332)
....+ .+.....||..|.|||++.+..+.....|||+||+++|.+.....||.+
T Consensus 718 a~~ks--gpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyyn 771 (772)
T KOG1152|consen 718 AYTKS--GPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYYN 771 (772)
T ss_pred hhhcC--CCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCcC
Confidence 87643 5567889999999999999988889999999999999999999999853
No 393
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=3.2e-34 Score=285.14 Aligned_cols=254 Identities=18% Similarity=0.230 Sum_probs=181.8
Q ss_pred hcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCC
Q 035861 11 FEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHD 90 (332)
Q Consensus 11 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 90 (332)
..|...+.||+|+||.||+|+...++..||||.+..... ....|+..+++++||||+++++++.+. .
T Consensus 690 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~------------~~~~~~~~l~~l~HpnIv~~~~~~~~~-~ 756 (968)
T PLN00113 690 SSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNS------------IPSSEIADMGKLQHPNIVKLIGLCRSE-K 756 (968)
T ss_pred hhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCcc------------ccHHHHHHHhhCCCCCcceEEEEEEcC-C
Confidence 356677889999999999999988999999998864321 112578899999999999999999555 6
Q ss_pred eEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCCCCCEEEcCCCcEEEeeccccccc
Q 035861 91 SVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLH---DNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQY 167 (332)
Q Consensus 91 ~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh---~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~ 167 (332)
..++||||++|+.+..+.. .+++..+..++.|++.||+||| +.+++|+||||+||+++.++..++. ++.....
T Consensus 757 ~~~lv~Ey~~~g~L~~~l~---~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~ 832 (968)
T PLN00113 757 GAYLIHEYIEGKNLSEVLR---NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLL 832 (968)
T ss_pred CCEEEEeCCCCCcHHHHHh---cCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-ecccccc
Confidence 7899999999765554443 3899999999999999999999 6699999999999999998887765 5544322
Q ss_pred CCCCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHHHcCCCCCCcccCCC
Q 035861 168 GSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEV-DQIDKIFKTLGTPTETIWPGLS 246 (332)
Q Consensus 168 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 246 (332)
.. .....++..|+|||++.+ ..++.++||||+|+++|||+||+.||...... ....+..+..... .....+
T Consensus 833 ~~----~~~~~~t~~y~aPE~~~~-~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~- 904 (968)
T PLN00113 833 CT----DTKCFISSAYVAPETRET-KDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSD--CHLDMW- 904 (968)
T ss_pred cc----CCCccccccccCcccccC-CCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCc--cchhhe-
Confidence 11 123357889999999876 67899999999999999999999998532110 0011111100000 000000
Q ss_pred CCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcC
Q 035861 247 ELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNH 306 (332)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 306 (332)
....... ..........++.+++.+||+.||++||+++|+++.
T Consensus 905 ----------------~~~~~~~-~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~ 947 (968)
T PLN00113 905 ----------------IDPSIRG-DVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKT 947 (968)
T ss_pred ----------------eCccccC-CCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHH
Confidence 0000000 000011123356789999999999999999999876
No 394
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=100.00 E-value=6.3e-35 Score=246.20 Aligned_cols=292 Identities=30% Similarity=0.525 Sum_probs=209.7
Q ss_pred cchhcccccccccccCcEEEEEEEECC---CCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhC-CCCCeeeeee
Q 035861 8 RSVFEFEKLNKISEGTYGIVYRARDKK---SGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSF-DHPSIVNVKE 83 (332)
Q Consensus 8 ~~~~~y~~~~~lg~g~~g~v~~~~~~~---~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~ 83 (332)
...+.|.++.+||.|.|++||++.+.. ..+.||+|.+...+... .+..|++.|..+ .+.||+++.+
T Consensus 33 ~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~p~----------ri~~El~~L~~~gG~~ni~~~~~ 102 (418)
T KOG1167|consen 33 FISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSSPS----------RILNELEMLYRLGGSDNIIKLNG 102 (418)
T ss_pred hhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccCch----------HHHHHHHHHHHhccchhhhcchh
Confidence 345689999999999999999999876 78899999998776544 467999999999 6899999999
Q ss_pred eEEcCCCeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCC-CcEEEeecc
Q 035861 84 VVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQ-GVLKICDFG 162 (332)
Q Consensus 84 ~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~-~~~~l~df~ 162 (332)
.+ ..++..++|+||.+......+.. .++..++..+++.++.||+++|++||+|+||||.|++.+.. ++-.|+|||
T Consensus 103 ~~-rnnd~v~ivlp~~~H~~f~~l~~---~l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n~~t~rg~LvDFg 178 (418)
T KOG1167|consen 103 CF-RNNDQVAIVLPYFEHDRFRDLYR---SLSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNFLYNRRTQRGVLVDFG 178 (418)
T ss_pred hh-ccCCeeEEEecccCccCHHHHHh---cCCHHHHHHHHHHHHHHhhhhhccCccccCCCccccccccccCCceEEech
Confidence 88 55588999999999754444433 46799999999999999999999999999999999999864 688999999
Q ss_pred cccccC----------------CC----------------------------CCCCccccccccccchhhhcCCCCCCch
Q 035861 163 MSRQYG----------------SP----------------------------LKPYTSLVVTLWYRAPELLLGAKKYSTA 198 (332)
Q Consensus 163 ~~~~~~----------------~~----------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~ 198 (332)
++...+ .+ ........||+.|+|||++.....-+.+
T Consensus 179 LA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~Qtta 258 (418)
T KOG1167|consen 179 LAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTA 258 (418)
T ss_pred hHHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCc
Confidence 976210 00 0001123578999999999887888999
Q ss_pred hHHHHHHHHHHHHHhCCCCCCCC-ChHHHHHHHHHHcCCCC--------CC--ccc--CCCCCccccccccCCc-hhhhh
Q 035861 199 VDMWSVGCIMAELLAKKPLFSGT-TEVDQIDKIFKTLGTPT--------ET--IWP--GLSELPGAKANFAKQP-YNLLR 264 (332)
Q Consensus 199 sDi~slG~~l~~lltg~~pf~~~-~~~~~~~~~~~~~~~~~--------~~--~~~--~~~~~~~~~~~~~~~~-~~~~~ 264 (332)
.|+||.|+++.-++++..||... ++.+.+..+....+... .. .+. .+...+.....+.... .....
T Consensus 259 iDiws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~ 338 (418)
T KOG1167|consen 259 IDIWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYK 338 (418)
T ss_pred cceeeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhccc
Confidence 99999999999999999998654 33333333332211111 00 111 0111111112222221 11111
Q ss_pred hhCCCCc-cCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCC
Q 035861 265 KRFPAAS-FTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVP 313 (332)
Q Consensus 265 ~~~~~~~-~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~ 313 (332)
..-+... .......+..+.+|+++||..||.+|.|++++|+||||....
T Consensus 339 ~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkHpFF~~~~ 388 (418)
T KOG1167|consen 339 SRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKHPFFDEAD 388 (418)
T ss_pred ccccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcCcCCcchh
Confidence 0111111 112233556889999999999999999999999999999655
No 395
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-35 Score=261.20 Aligned_cols=261 Identities=30% Similarity=0.463 Sum_probs=218.8
Q ss_pred hcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCC
Q 035861 11 FEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHD 90 (332)
Q Consensus 11 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 90 (332)
++|+.+..+|+|.+|.||++++..+++..|+|+++......-. .+.+|+-+++.++||||+.+++.+... .
T Consensus 15 ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~--------~iqqei~~~~dc~h~nivay~gsylr~-d 85 (829)
T KOG0576|consen 15 DDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFS--------GIQQEIGMLRDCRHPNIVAYFGSYLRR-D 85 (829)
T ss_pred cchhheeeecCCcccchhhhcccccCchhhheeeeccCCcccc--------ccccceeeeecCCCcChHHHHhhhhhh-c
Confidence 4899999999999999999999999999999999887654432 334799999999999999999999555 7
Q ss_pred eEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCCC
Q 035861 91 SVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSP 170 (332)
Q Consensus 91 ~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~~ 170 (332)
..+|.||||+|+.+..+..-.+++++.++..+++..+++|+|||+.|-+|||||-.||+++..|.+|+.|||.+..++.-
T Consensus 86 klwicMEycgggslQdiy~~TgplselqiayvcRetl~gl~ylhs~gk~hRdiKGanilltd~gDvklaDfgvsaqitat 165 (829)
T KOG0576|consen 86 KLWICMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLTDEGDVKLADFGVSAQITAT 165 (829)
T ss_pred CcEEEEEecCCCcccceeeecccchhHHHHHHHhhhhccchhhhcCCcccccccccceeecccCceeecccCchhhhhhh
Confidence 78999999999887777777899999999999999999999999999999999999999999999999999999888766
Q ss_pred CCCCccccccccccchhhhc--CCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCC
Q 035861 171 LKPYTSLVVTLWYRAPELLL--GAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSEL 248 (332)
Q Consensus 171 ~~~~~~~~~~~~y~aPE~~~--~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (332)
.......+||+.|+|||+-. ..+.+...+|+|++|+..-|+.....|-..........-+-+....++..
T Consensus 166 i~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~LmTkS~~qpp~l-------- 237 (829)
T KOG0576|consen 166 IAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFLMTKSGFQPPTL-------- 237 (829)
T ss_pred hhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHHHhhccCCCCCcc--------
Confidence 66778889999999999863 23568999999999999999888777766555544443333322222211
Q ss_pred ccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCC
Q 035861 249 PGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEV 312 (332)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~ 312 (332)
......++.+-+|++.+|.++|.+||+++-+|.|||..+-
T Consensus 238 ------------------------kDk~kws~~fh~fvK~altknpKkRptaeklL~h~fvs~~ 277 (829)
T KOG0576|consen 238 ------------------------KDKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQHPFVSQT 277 (829)
T ss_pred ------------------------cCCccchHHHHHHHHHHhcCCCccCCChhhheeceeeccc
Confidence 1111257888899999999999999999999999998764
No 396
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=100.00 E-value=9.5e-34 Score=217.68 Aligned_cols=214 Identities=27% Similarity=0.465 Sum_probs=174.8
Q ss_pred hcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhC-CCCCeeeeeeeEEcCC
Q 035861 11 FEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSF-DHPSIVNVKEVVMDDH 89 (332)
Q Consensus 11 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~ 89 (332)
++...+..||+|++|.|-+.++..+|...|+|.+..+...++. ++.+.|+.+.++. .+|+++.++|.+...
T Consensus 46 d~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q-------~r~L~dldi~~r~~~CPf~V~FyGa~~re- 117 (282)
T KOG0984|consen 46 DDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQ-------KRLLMDLDIIMRTVDCPFTVHFYGALFRE- 117 (282)
T ss_pred hhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHH-------HHHHHhhhhhccCCCCCeEEEeehhhhcc-
Confidence 3566788999999999999999999999999999876653322 2456778777666 799999999988555
Q ss_pred CeEEEEcccccccHHH---HHHhcCCCCCHHHHHHHHHHHHHHHHHHHH-CCcccccCCCCCEEEcCCCcEEEeeccccc
Q 035861 90 DSVYMVMEYMEHDLKW---LMESMKQPFSTSEVKCLMLQLLEGVKYLHD-NWVLHRDLKTSNLLLNNQGVLKICDFGMSR 165 (332)
Q Consensus 90 ~~~~lv~e~~~~~l~~---~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~-~~i~H~di~p~Nili~~~~~~~l~df~~~~ 165 (332)
...+|.||.+.-++.. .....++.++|..+-+|+..+..||.|||+ ..++|||+||+||||+.+|+||+||||.+.
T Consensus 118 gdvwIcME~M~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG 197 (282)
T KOG0984|consen 118 GDVWICMELMDTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINYDGQVKICDFGISG 197 (282)
T ss_pred ccEEEeHHHhhhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEccCCcEEEcccccce
Confidence 7789999999876543 334457889999999999999999999995 589999999999999999999999999987
Q ss_pred ccCCCCCCCccccccccccchhhhcC---CCCCCchhHHHHHHHHHHHHHhCCCCCCC-CChHHHHHHHHHH
Q 035861 166 QYGSPLKPYTSLVVTLWYRAPELLLG---AKKYSTAVDMWSVGCIMAELLAKKPLFSG-TTEVDQIDKIFKT 233 (332)
Q Consensus 166 ~~~~~~~~~~~~~~~~~y~aPE~~~~---~~~~~~~sDi~slG~~l~~lltg~~pf~~-~~~~~~~~~~~~~ 233 (332)
...+.. ..+...|...|+|||.+.. ...|+-+||+||||+++.||++++.||.. .+..+.+.++...
T Consensus 198 ~L~dSi-Akt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~tpF~qLkqvVee 268 (282)
T KOG0984|consen 198 YLVDSI-AKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGTPFQQLKQVVEE 268 (282)
T ss_pred eehhhh-HHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCCHHHHHHHHhcC
Confidence 664322 2233456777999999853 24689999999999999999999999975 5677777777654
No 397
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-33 Score=238.15 Aligned_cols=189 Identities=28% Similarity=0.385 Sum_probs=152.1
Q ss_pred hhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHH--hhCCCCCeeeeeeeEEc
Q 035861 10 VFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINIL--LSFDHPSIVNVKEVVMD 87 (332)
Q Consensus 10 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l--~~l~h~~i~~~~~~~~~ 87 (332)
-.+..+.+.||+|.||.||+|.+. |+.||||++...... +..+|.++. .-|+|+||+.+++.-..
T Consensus 210 arqI~L~e~IGkGRyGEVwrG~wr--Ge~VAVKiF~srdE~-----------SWfrEtEIYqTvmLRHENILgFIaaD~~ 276 (513)
T KOG2052|consen 210 ARQIVLQEIIGKGRFGEVWRGRWR--GEDVAVKIFSSRDER-----------SWFRETEIYQTVMLRHENILGFIAADNK 276 (513)
T ss_pred hheeEEEEEecCccccceeecccc--CCceEEEEecccchh-----------hhhhHHHHHHHHHhccchhhhhhhcccc
Confidence 347889999999999999999999 899999999754321 234555555 44599999999887544
Q ss_pred CCC---eEEEEccccc-ccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC--------CcccccCCCCCEEEcCCCc
Q 035861 88 DHD---SVYMVMEYME-HDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDN--------WVLHRDLKTSNLLLNNQGV 155 (332)
Q Consensus 88 ~~~---~~~lv~e~~~-~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~--------~i~H~di~p~Nili~~~~~ 155 (332)
+.+ .+|+|++|.+ |+|.+.+.. ..++.+...+++..+|.||+|||.. .|+|||||+.||||.++|.
T Consensus 277 ~~gs~TQLwLvTdYHe~GSL~DyL~r--~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~ 354 (513)
T KOG2052|consen 277 DNGSWTQLWLVTDYHEHGSLYDYLNR--NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGT 354 (513)
T ss_pred CCCceEEEEEeeecccCCcHHHHHhh--ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCc
Confidence 433 4899999999 555555554 6899999999999999999999942 3999999999999999999
Q ss_pred EEEeecccccccCCC----CCCCccccccccccchhhhcCCCCC-----CchhHHHHHHHHHHHHHh
Q 035861 156 LKICDFGMSRQYGSP----LKPYTSLVVTLWYRAPELLLGAKKY-----STAVDMWSVGCIMAELLA 213 (332)
Q Consensus 156 ~~l~df~~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~-----~~~sDi~slG~~l~~llt 213 (332)
..|+|+|+|...... ........||.+|||||++.+.-.. -..+||||||+++||++-
T Consensus 355 C~IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiar 421 (513)
T KOG2052|consen 355 CCIADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIAR 421 (513)
T ss_pred EEEeeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHH
Confidence 999999999877433 2345667899999999999753221 236899999999999974
No 398
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-32 Score=256.33 Aligned_cols=247 Identities=25% Similarity=0.419 Sum_probs=196.3
Q ss_pred cccccccccCcEEEEEEEECC-------CCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhC-CCCCeeeeeeeE
Q 035861 14 EKLNKISEGTYGIVYRARDKK-------SGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSF-DHPSIVNVKEVV 85 (332)
Q Consensus 14 ~~~~~lg~g~~g~v~~~~~~~-------~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~ 85 (332)
.+.+.||.|+||.|++|.... ....||||.+.......+. ..+..|+++++.+ .|+|++.+.|.+
T Consensus 299 ~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~-------~~~~~El~~m~~~g~H~niv~llG~~ 371 (609)
T KOG0200|consen 299 KLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEK-------KDLMSELNVLKELGKHPNIVNLLGAC 371 (609)
T ss_pred cccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHH-------HHHHHHHHHHHHhcCCcchhhheeee
Confidence 556689999999999997541 1457999998766554221 2567999999999 699999999999
Q ss_pred EcCCCeEEEEccccc-ccHHHHHHhcC---------------CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEE
Q 035861 86 MDDHDSVYMVMEYME-HDLKWLMESMK---------------QPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLL 149 (332)
Q Consensus 86 ~~~~~~~~lv~e~~~-~~l~~~~~~~~---------------~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nil 149 (332)
.. .+..++|.||+. |+++..++.+. ..++...+..++.|||.|++||++..++||||-..|||
T Consensus 372 t~-~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaRNVL 450 (609)
T KOG0200|consen 372 TQ-DGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVPCVHRDLAARNVL 450 (609)
T ss_pred cc-CCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCCccchhhhhhhEE
Confidence 55 588999999998 67777777655 34899999999999999999999999999999999999
Q ss_pred EcCCCcEEEeecccccccCCCCCCC-cccc--ccccccchhhhcCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCC-hH
Q 035861 150 LNNQGVLKICDFGMSRQYGSPLKPY-TSLV--VTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA-KKPLFSGTT-EV 224 (332)
Q Consensus 150 i~~~~~~~l~df~~~~~~~~~~~~~-~~~~--~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~llt-g~~pf~~~~-~~ 224 (332)
++.+..+|++|||+++......... .... -...|+|||.+.. ..++.+|||||+|+++||++| |..||.+-. ..
T Consensus 451 i~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~-~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~~ 529 (609)
T KOG0200|consen 451 ITKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFD-RVFTSKSDVWSFGILLWEIFTLGGTPYPGIPPTE 529 (609)
T ss_pred ecCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhcc-CcccccchhhHHHHHHHHHhhCCCCCCCCCCcHH
Confidence 9999999999999998643221111 1111 2455999999998 889999999999999999999 888998744 34
Q ss_pred HHHHHHHHHcCCCCCCcccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHh
Q 035861 225 DQIDKIFKTLGTPTETIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDAL 304 (332)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell 304 (332)
+....+..+ .+...+..++.++.++++.||+.+|++||++.++.
T Consensus 530 ~l~~~l~~G------------------------------------~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~ 573 (609)
T KOG0200|consen 530 ELLEFLKEG------------------------------------NRMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECV 573 (609)
T ss_pred HHHHHHhcC------------------------------------CCCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHH
Confidence 443323222 22333444799999999999999999999998876
Q ss_pred c
Q 035861 305 N 305 (332)
Q Consensus 305 ~ 305 (332)
+
T Consensus 574 ~ 574 (609)
T KOG0200|consen 574 E 574 (609)
T ss_pred H
Confidence 5
No 399
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=9.9e-33 Score=235.75 Aligned_cols=191 Identities=25% Similarity=0.351 Sum_probs=152.2
Q ss_pred hhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHH--hhCCCCCeeeeeeeEEc
Q 035861 10 VFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINIL--LSFDHPSIVNVKEVVMD 87 (332)
Q Consensus 10 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l--~~l~h~~i~~~~~~~~~ 87 (332)
+...+.++.+|+|.||.||+|+.. ++.||||++...... ++..|-++. -.++|+||+.+++.-.-
T Consensus 209 l~pl~l~eli~~Grfg~V~KaqL~--~~~VAVKifp~~~kq-----------s~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr 275 (534)
T KOG3653|consen 209 LDPLQLLELIGRGRFGCVWKAQLD--NRLVAVKIFPEQEKQ-----------SFQNEKNIYSLPGMKHENILQFIGAEKR 275 (534)
T ss_pred CCchhhHHHhhcCccceeehhhcc--CceeEEEecCHHHHH-----------HHHhHHHHHhccCccchhHHHhhchhcc
Confidence 456788999999999999999987 789999999765321 234454444 45589999999987521
Q ss_pred ---CCCeEEEEcccccc-cHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---------CcccccCCCCCEEEcCCC
Q 035861 88 ---DHDSVYMVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDN---------WVLHRDLKTSNLLLNNQG 154 (332)
Q Consensus 88 ---~~~~~~lv~e~~~~-~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~---------~i~H~di~p~Nili~~~~ 154 (332)
....++||+++.+. +|.+.+. ...+++....+|+..++.||+|||+- .|+|||||+.||||..|+
T Consensus 276 ~t~~~~eywLVt~fh~kGsL~dyL~--~ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~Dl 353 (534)
T KOG3653|consen 276 GTADRMEYWLVTEFHPKGSLCDYLK--ANTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDL 353 (534)
T ss_pred CCccccceeEEeeeccCCcHHHHHH--hccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCC
Confidence 13469999999985 5555554 35799999999999999999999963 499999999999999999
Q ss_pred cEEEeecccccccCCCCCC--CccccccccccchhhhcCCCCCC-----chhHHHHHHHHHHHHHhCC
Q 035861 155 VLKICDFGMSRQYGSPLKP--YTSLVVTLWYRAPELLLGAKKYS-----TAVDMWSVGCIMAELLAKK 215 (332)
Q Consensus 155 ~~~l~df~~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~-----~~sDi~slG~~l~~lltg~ 215 (332)
+..|+|||++..+...... .....||.+|||||++.+.-.+. .+.||||+|.++||+++.-
T Consensus 354 TccIaDFGLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC 421 (534)
T KOG3653|consen 354 TCCIADFGLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRC 421 (534)
T ss_pred cEEeeccceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhc
Confidence 9999999999887532221 22357899999999998754444 3689999999999999854
No 400
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.98 E-value=6.2e-31 Score=215.69 Aligned_cols=213 Identities=42% Similarity=0.686 Sum_probs=178.5
Q ss_pred ccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCCeEEEEccc
Q 035861 19 ISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHDSVYMVMEY 98 (332)
Q Consensus 19 lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~lv~e~ 98 (332)
||.|++|.||++....+++.+++|++....... ....+.+|+..++.+.|++++++++.+... ...++++|+
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~-------~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~-~~~~~~~e~ 72 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSS-------LLEELLREIEILKKLNHPNIVKLYGVFEDE-NHLYLVMEY 72 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchh-------HHHHHHHHHHHHHhcCCCCeeeEeeeeecC-CeEEEEEec
Confidence 689999999999998889999999998654321 012467899999999999999999999554 788999999
Q ss_pred ccc-cHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcC-CCcEEEeecccccccCCCCCCCcc
Q 035861 99 MEH-DLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNN-QGVLKICDFGMSRQYGSPLKPYTS 176 (332)
Q Consensus 99 ~~~-~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~-~~~~~l~df~~~~~~~~~~~~~~~ 176 (332)
++| ++.+.+......++...+..++.+++.+|++||+.|++|+||+|.||+++. ++.++|+||+.+............
T Consensus 73 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~~~~~ 152 (215)
T cd00180 73 CEGGSLKDLLKENEGKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKSLLKT 152 (215)
T ss_pred CCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcchhhc
Confidence 995 555544443357999999999999999999999999999999999999999 899999999999876443222344
Q ss_pred ccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCCcccccccc
Q 035861 177 LVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGAKANFA 256 (332)
Q Consensus 177 ~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (332)
..+...|.+||.+......+.++|+|++|++++++
T Consensus 153 ~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l--------------------------------------------- 187 (215)
T cd00180 153 IVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL--------------------------------------------- 187 (215)
T ss_pred ccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH---------------------------------------------
Confidence 56778899999987743788999999999999998
Q ss_pred CCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCC
Q 035861 257 KQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHY 307 (332)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp 307 (332)
..+.+++.+|++.+|++||++.++++++
T Consensus 188 -----------------------~~~~~~l~~~l~~~p~~R~~~~~l~~~~ 215 (215)
T cd00180 188 -----------------------PELKDLIRKMLQKDPEKRPSAKEILEHL 215 (215)
T ss_pred -----------------------HHHHHHHHHHhhCCcccCcCHHHHhhCC
Confidence 1224899999999999999999999885
No 401
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.97 E-value=1.6e-31 Score=223.52 Aligned_cols=250 Identities=20% Similarity=0.279 Sum_probs=199.2
Q ss_pred cccccccccccCcEEEEEEEECCCC-----cEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEE
Q 035861 12 EFEKLNKISEGTYGIVYRARDKKSG-----EIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVM 86 (332)
Q Consensus 12 ~y~~~~~lg~g~~g~v~~~~~~~~~-----~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~ 86 (332)
+++....+-+|.||.||.|++.... +.|.+|++.......+ ...++.|...+....|||++++.++.+
T Consensus 285 Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQ-------v~~~L~es~lly~~sH~nll~V~~V~i 357 (563)
T KOG1024|consen 285 RVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQ-------VNLLLQESMLLYGASHPNLLSVLGVSI 357 (563)
T ss_pred heechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHH-------HHHHHHHHHHHhcCcCCCccceeEEEe
Confidence 5777788999999999999886433 3466666654322111 124567888888889999999999999
Q ss_pred cCCCeEEEEccccc-ccHHHHHHhc-------CCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEE
Q 035861 87 DDHDSVYMVMEYME-HDLKWLMESM-------KQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKI 158 (332)
Q Consensus 87 ~~~~~~~lv~e~~~-~~l~~~~~~~-------~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l 158 (332)
++....++++.+.+ |++...+.-+ ...++..+...++.|++.|++|||++|++|.||-..|.+|++.-++||
T Consensus 358 e~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiAaRNCvIdd~LqVkl 437 (563)
T KOG1024|consen 358 EDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAARNCVIDDQLQVKL 437 (563)
T ss_pred eccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhhhhcceehhheeEEe
Confidence 98888889999888 5665555422 234788889999999999999999999999999999999999999999
Q ss_pred eecccccccCCCCCCC--ccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcC
Q 035861 159 CDFGMSRQYGSPLKPY--TSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA-KKPLFSGTTEVDQIDKIFKTLG 235 (332)
Q Consensus 159 ~df~~~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~llt-g~~pf~~~~~~~~~~~~~~~~~ 235 (332)
+|=.+++..-.....+ .....+..||+||.+.+ ..++.+||+||||+++||++| |+.||..-++.+...-+.++
T Consensus 438 tDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n-~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~~ylkdG-- 514 (563)
T KOG1024|consen 438 TDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQN-SHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEMEHYLKDG-- 514 (563)
T ss_pred ccchhccccCcccccccCCCCCCcccccCHHHHhh-hhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHHHHHHhcc--
Confidence 9988887653322221 22344677999999998 789999999999999999998 89999888887766655443
Q ss_pred CCCCCcccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhc
Q 035861 236 TPTETIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALN 305 (332)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 305 (332)
.++..+-++++++..++.-||+.+|++||+++++..
T Consensus 515 ----------------------------------yRlaQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~ 550 (563)
T KOG1024|consen 515 ----------------------------------YRLAQPFNCPDELFTVMACCWALLPEERPSFSQLVI 550 (563)
T ss_pred ----------------------------------ceecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHH
Confidence 334455568999999999999999999999999864
No 402
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.97 E-value=3.1e-32 Score=217.55 Aligned_cols=259 Identities=23% Similarity=0.339 Sum_probs=189.9
Q ss_pred cccchhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhC-CCCCeeeeeee
Q 035861 6 GCRSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSF-DHPSIVNVKEV 84 (332)
Q Consensus 6 ~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~ 84 (332)
-....+.|.+.+.+|+|.||.+.++.+++++..+|+|.+........ ++.+|...--.| .|.||+.-+++
T Consensus 19 kv~l~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~tt~~---------dF~rEfhY~~~Ls~H~hIi~tY~v 89 (378)
T KOG1345|consen 19 KVDLEDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQTTQA---------DFVREFHYSFFLSPHQHIIDTYEV 89 (378)
T ss_pred ccchhhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcchhhHH---------HHHHHhccceeeccchhhhHHHHH
Confidence 34566799999999999999999999999999999999976543222 355666655455 58999999998
Q ss_pred EEcCCCeEEEEccccc-ccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCC--CcEEEeec
Q 035861 85 VMDDHDSVYMVMEYME-HDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQ--GVLKICDF 161 (332)
Q Consensus 85 ~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~--~~~~l~df 161 (332)
..+..+.+.+++|+++ |+|.+.+.. ..+-|.....++.|+++||.|||+++++|||||.+||||... .+|||+||
T Consensus 90 aFqt~d~YvF~qE~aP~gdL~snv~~--~GigE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~~df~rvKlcDF 167 (378)
T KOG1345|consen 90 AFQTSDAYVFVQEFAPRGDLRSNVEA--AGIGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFDADFYRVKLCDF 167 (378)
T ss_pred HhhcCceEEEeeccCccchhhhhcCc--ccccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEecCCccEEEeeec
Confidence 8888889999999999 566555443 568899999999999999999999999999999999999654 38999999
Q ss_pred ccccccCCCCCCCccccccccccchhhhcC----CCCCCchhHHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHHHcCC
Q 035861 162 GMSRQYGSPLKPYTSLVVTLWYRAPELLLG----AKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEV-DQIDKIFKTLGT 236 (332)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~----~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~-~~~~~~~~~~~~ 236 (332)
|..+..+.-. ........|.+||.... .-...+.+|+|.||+++|.++||..||...... ..+.+.....+.
T Consensus 168 G~t~k~g~tV---~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~r 244 (378)
T KOG1345|consen 168 GLTRKVGTTV---KYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLKR 244 (378)
T ss_pred ccccccCcee---hhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhcc
Confidence 9998765322 22233556889998643 223577899999999999999999999743211 111111111111
Q ss_pred CCCCcccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCC---CCHHHHhcCCC
Q 035861 237 PTETIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKR---ITVDDALNHYW 308 (332)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R---ps~~ell~hp~ 308 (332)
.... .+.. =.-.++.+..++++-|..++.+| -++.......|
T Consensus 245 k~~~-----------------------------~P~~-F~~fs~~a~r~Fkk~lt~~~~drcki~~~kk~rk~~w 289 (378)
T KOG1345|consen 245 KNPA-----------------------------LPKK-FNPFSEKALRLFKKSLTPRFKDRCKIWTAKKMRKCLW 289 (378)
T ss_pred cCcc-----------------------------Cchh-hcccCHHHHHHHHHhcCCcccccchhHHHHHHHHHHH
Confidence 1100 0000 01168888899999999999998 34444444444
No 403
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.97 E-value=9.7e-30 Score=211.09 Aligned_cols=203 Identities=41% Similarity=0.633 Sum_probs=168.3
Q ss_pred ccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCCeE
Q 035861 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHDSV 92 (332)
Q Consensus 13 y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 92 (332)
|.+.+.||.|++|+||++....+++.+++|.+...... .....+..|+..+++++|+|++++++.+... ...
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~-------~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~-~~~ 72 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTE-------KQREEFLREIRILKKLKHPNIVKLYGVFEDP-EPL 72 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccch-------HHHHHHHHHHHHHHhCCCCChhhheeeeecC-Cce
Confidence 67789999999999999999988999999999865433 0112566899999999999999999998544 778
Q ss_pred EEEcccccc-cHHHHHHhcCCC-CCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCCC
Q 035861 93 YMVMEYMEH-DLKWLMESMKQP-FSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSP 170 (332)
Q Consensus 93 ~lv~e~~~~-~l~~~~~~~~~~-l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~~ 170 (332)
++++|++++ ++.+.+.. ... +++..+..++.+++.+|.+||+.+++|+||+|.||+++.++.++|+|||.+......
T Consensus 73 ~~v~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~ 151 (225)
T smart00221 73 YLVMEYCEGGDLFDYLRK-KGGKLSEEEARFYLRQILEALEYLHSLGIVHRDLKPENILLGMDGLVKLADFGLARFIHRD 151 (225)
T ss_pred EEEEeccCCCCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeeCceeeEecCc
Confidence 999999998 55555444 444 899999999999999999999999999999999999999999999999988876433
Q ss_pred C-CCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCC-CChH
Q 035861 171 L-KPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSG-TTEV 224 (332)
Q Consensus 171 ~-~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~-~~~~ 224 (332)
. .......++..|++||.+.....++.++|+|+||++++++++|+.||.. .+..
T Consensus 152 ~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~~~~~~ 207 (225)
T smart00221 152 LAALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSGEGEFT 207 (225)
T ss_pred ccccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccccchhH
Confidence 2 1223446677899999984436678899999999999999999999977 4444
No 404
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.97 E-value=6.7e-31 Score=255.12 Aligned_cols=198 Identities=16% Similarity=0.205 Sum_probs=140.5
Q ss_pred CCeeeeeeeEE------cCCCeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEE
Q 035861 76 PSIVNVKEVVM------DDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLL 149 (332)
Q Consensus 76 ~~i~~~~~~~~------~~~~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nil 149 (332)
.||..+++.+. ......+.++|+++++|.+.+......+++..++.++.||+.||+|||++||+|+||||+|||
T Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~gIvHrDlKP~NiL 112 (793)
T PLN00181 33 DYVRSLLGSHKEGNLDGLDDDSIVRALECEDVSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQGIVVHNVRPSCFV 112 (793)
T ss_pred HHHHHhhcccCCccccccccchhhhhhccCCccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhCCeeeccCCchhEE
Confidence 35555555441 112457788999999888887665567999999999999999999999999999999999999
Q ss_pred EcCCCcEEEe-------------------ecccccccCCCC----------------CCCccccccccccchhhhcCCCC
Q 035861 150 LNNQGVLKIC-------------------DFGMSRQYGSPL----------------KPYTSLVVTLWYRAPELLLGAKK 194 (332)
Q Consensus 150 i~~~~~~~l~-------------------df~~~~~~~~~~----------------~~~~~~~~~~~y~aPE~~~~~~~ 194 (332)
|+..+.++++ |||+++...... .......||+.|+|||++.+ ..
T Consensus 113 l~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~-~~ 191 (793)
T PLN00181 113 MSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSPEEDNG-SS 191 (793)
T ss_pred EcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceEChhhhcc-CC
Confidence 9765555555 555443211000 00011357888999999887 66
Q ss_pred CCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCCccccccccCCchhhhhhhCCCCccCC
Q 035861 195 YSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTG 274 (332)
Q Consensus 195 ~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (332)
++.++|||||||++|||++|..|+.... .....+..... ++..
T Consensus 192 ~~~~sDVwSlGviL~ELl~~~~~~~~~~--~~~~~~~~~~~-~~~~---------------------------------- 234 (793)
T PLN00181 192 SNCASDVYRLGVLLFELFCPVSSREEKS--RTMSSLRHRVL-PPQI---------------------------------- 234 (793)
T ss_pred CCchhhhhhHHHHHHHHhhCCCchhhHH--HHHHHHHHhhc-Chhh----------------------------------
Confidence 8999999999999999999888765321 11111111100 0000
Q ss_pred CCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCC
Q 035861 275 SPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEV 312 (332)
Q Consensus 275 ~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~ 312 (332)
....+...+++.+||+++|.+||++.|+|+||||...
T Consensus 235 -~~~~~~~~~~~~~~L~~~P~~Rps~~eil~h~~~~~~ 271 (793)
T PLN00181 235 -LLNWPKEASFCLWLLHPEPSCRPSMSELLQSEFINEP 271 (793)
T ss_pred -hhcCHHHHHHHHHhCCCChhhCcChHHHhhchhhhhh
Confidence 0013445689999999999999999999999999874
No 405
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.96 E-value=2.6e-29 Score=200.83 Aligned_cols=167 Identities=22% Similarity=0.298 Sum_probs=128.3
Q ss_pred ccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCCCCCCCcccccc
Q 035861 101 HDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVT 180 (332)
Q Consensus 101 ~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~~~~~~~~~~~~ 180 (332)
|++.+.+......+++..++.++.|++.||+|||+.+ ||+||+++.++.+++ ||.+...... ...|+
T Consensus 1 GsL~~~l~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~~~~~~~~~--fG~~~~~~~~-----~~~g~ 67 (176)
T smart00750 1 VSLADILEVRGRPLNEEEIWAVCLQCLRALRELHRQA------KSGNILLTWDGLLKL--DGSVAFKTPE-----QSRVD 67 (176)
T ss_pred CcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeEcCccceee--ccceEeeccc-----cCCCc
Confidence 5677777765677999999999999999999999998 999999999999999 9988765432 22578
Q ss_pred ccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHHHcCCCCCCcccCCCCCccccccccCCc
Q 035861 181 LWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEV-DQIDKIFKTLGTPTETIWPGLSELPGAKANFAKQP 259 (332)
Q Consensus 181 ~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (332)
+.|+|||++.+ ..++.++||||||+++|+|++|..||...... .....+...........
T Consensus 68 ~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~------------------ 128 (176)
T smart00750 68 PYFMAPEVIQG-QSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPRD------------------ 128 (176)
T ss_pred ccccChHHhcC-CCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCccc------------------
Confidence 99999999987 67899999999999999999999999765432 22223222211110000
Q ss_pred hhhhhhhCCCCccCCCCCCCc--hHHHHHHHhcCCCCCCCCCHHHHhcCCCCCC
Q 035861 260 YNLLRKRFPAASFTGSPVLSE--SGFDLLNRLLTYDPEKRITVDDALNHYWFHE 311 (332)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~--~~~~li~~~l~~dp~~Rps~~ell~hp~f~~ 311 (332)
......++. ++.++|.+||+.+|.+||++.++++|+|+..
T Consensus 129 ------------~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~ 170 (176)
T smart00750 129 ------------RSNLESVSAARSFADFMRVCASRLPQRREAANHYLAHCRALF 170 (176)
T ss_pred ------------cccHHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHHH
Confidence 000011233 6889999999999999999999999998764
No 406
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.95 E-value=2.1e-28 Score=226.53 Aligned_cols=269 Identities=29% Similarity=0.423 Sum_probs=195.9
Q ss_pred cccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCCeEE
Q 035861 14 EKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHDSVY 93 (332)
Q Consensus 14 ~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 93 (332)
.-...+|.|++|.|+.+......+....|.+.......+..... ...+..|.-+-..+.|+|++.....+.+... .+
T Consensus 321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~--~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~-~~ 397 (601)
T KOG0590|consen 321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKY--NYNITSEFCIGSSLSHPNIIETLDIVQEIDG-IL 397 (601)
T ss_pred CccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHH--hhhhhhheeecccccCCchhhhHHHHhhccc-ch
Confidence 46678999999988888877666666666655321011111111 1125566666677899999887777745433 33
Q ss_pred EEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCCCC--
Q 035861 94 MVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPL-- 171 (332)
Q Consensus 94 lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~~~-- 171 (332)
-+||||++++ ..+....+.+...++..++.||+.|+.|+|+.|+.|+|+|++|+++..+|.+|++|||.+.....+.
T Consensus 398 ~~mE~~~~Dl-f~~~~~~~~~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~e~ 476 (601)
T KOG0590|consen 398 QSMEYCPYDL-FSLVMSNGKLTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLVTENGILKIIDFGAASVFRYPWEK 476 (601)
T ss_pred hhhhcccHHH-HHHHhcccccchhhhhHHHHHHHHHHHHHHhcCceeccCccccEEEecCCceEEeecCcceeeccCcch
Confidence 4499999944 4444446789999999999999999999999999999999999999999999999999987653322
Q ss_pred --CCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCCc
Q 035861 172 --KPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELP 249 (332)
Q Consensus 172 --~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (332)
.......|+..|.|||++..........||||.|+++..|.+|+.||......+..........
T Consensus 477 ~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~~~-------------- 542 (601)
T KOG0590|consen 477 NIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNNYSD-------------- 542 (601)
T ss_pred hhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhhhcccc--------------
Confidence 2345678899999999999877778889999999999999999999976544322110000000
Q ss_pred cccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCCC
Q 035861 250 GAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVPL 314 (332)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~ 314 (332)
.... ..........++.+.+.+|.+||++||.+|.++++|++++||+.+..
T Consensus 543 --~~~~------------~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d~W~~~i~~ 593 (601)
T KOG0590|consen 543 --QRNI------------FEGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILNDEWIRSIEC 593 (601)
T ss_pred --cccc------------ccChHHHHHhchhhHHHHHHHHccCChhheecHHHHhhChHhhhcce
Confidence 0000 00111112226778889999999999999999999999999999874
No 407
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.94 E-value=5.1e-26 Score=179.25 Aligned_cols=204 Identities=24% Similarity=0.325 Sum_probs=171.3
Q ss_pred hhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCC-CCeeeeeeeEEcC
Q 035861 10 VFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDH-PSIVNVKEVVMDD 88 (332)
Q Consensus 10 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h-~~i~~~~~~~~~~ 88 (332)
...|.++++||+|+||.+|+|....+|+.||||+-....... .+..|..+.+.|++ ..|..+..+. .+
T Consensus 14 ~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~hp----------qL~yEskvY~iL~~g~GiP~i~~y~-~e 82 (341)
T KOG1163|consen 14 GGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAKHP----------QLLYESKVYRILQGGVGIPHIRHYG-TE 82 (341)
T ss_pred ccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCCCc----------chhHHHHHHHHhccCCCCchhhhhc-cc
Confidence 458999999999999999999999999999999987655443 34578888888865 4555555555 55
Q ss_pred CCeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCC---CcEEEeeccccc
Q 035861 89 HDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQ---GVLKICDFGMSR 165 (332)
Q Consensus 89 ~~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~---~~~~l~df~~~~ 165 (332)
..+-.+||+.++.++.+...-+...++...++-++-|++.-++|+|.++++|+||||+|+|..-. ..+.++|||+++
T Consensus 83 ~~ynvlVMdLLGPsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaK 162 (341)
T KOG1163|consen 83 KDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAK 162 (341)
T ss_pred cccceeeeeccCccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHHhhccccccCCccceeeccccccceEEEEeccchh
Confidence 57788999999999999999999999999999999999999999999999999999999998633 479999999998
Q ss_pred ccCCCC-------CCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHH
Q 035861 166 QYGSPL-------KPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVD 225 (332)
Q Consensus 166 ~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~ 225 (332)
.+.+.. .......||..|.+-.+..+ ..-+.+.|+-|+|.++.++.-|..||.+.....
T Consensus 163 ky~d~~t~~HIpyre~r~ltGTaRYASinAh~g-~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~t 228 (341)
T KOG1163|consen 163 KYRDIRTRQHIPYREDRNLTGTARYASINAHLG-IEQSRRDDMESVGYVLMYFNRGSLPWQGLKAAT 228 (341)
T ss_pred hhccccccccCccccCCccceeeeehhhhhhhh-hhhhhhhhhhhhcceeeeeecCCCcccccchhh
Confidence 774322 22345678999999888776 556889999999999999999999998865443
No 408
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.94 E-value=5.1e-26 Score=187.05 Aligned_cols=201 Identities=23% Similarity=0.352 Sum_probs=173.3
Q ss_pred cccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhC-CCCCeeeeeeeEEcCCC
Q 035861 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSF-DHPSIVNVKEVVMDDHD 90 (332)
Q Consensus 12 ~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~ 90 (332)
.|+|.++||.|+||..+.|++..++++||||.-...+.-. .+..|.+..+.| ..++|..++.+. ....
T Consensus 29 hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS~AP----------QLrdEYr~YKlL~g~~GIP~vYYFG-qeG~ 97 (449)
T KOG1165|consen 29 HYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKSEAP----------QLRDEYRTYKLLGGTEGIPQVYYFG-QEGK 97 (449)
T ss_pred cceeccccccCcceeeecccccccCceEEEEeccccCCcc----------hHHHHHHHHHHHcCCCCCCceeeec-cccc
Confidence 7999999999999999999999999999999887655433 345777777777 578888877766 4447
Q ss_pred eEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCC-----cEEEeeccccc
Q 035861 91 SVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQG-----VLKICDFGMSR 165 (332)
Q Consensus 91 ~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~-----~~~l~df~~~~ 165 (332)
+-.+|+|.++.+|.+...-+...|+...++.++.|++.-++++|++.+|.+||||+|+||...+ .+.++|||+++
T Consensus 98 ~NiLVidLLGPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK 177 (449)
T KOG1165|consen 98 YNILVIDLLGPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAK 177 (449)
T ss_pred hhhhhhhhhCcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeecCCCCCCCceEEEEeccchh
Confidence 7789999999999999999999999999999999999999999999999999999999998654 59999999999
Q ss_pred ccCCCCC-------CCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChH
Q 035861 166 QYGSPLK-------PYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEV 224 (332)
Q Consensus 166 ~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~ 224 (332)
.+.++.. ......||.+||+-....+ ..-+.+.|+-|||.++++.+-|..||.+....
T Consensus 178 ~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlG-rEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~ 242 (449)
T KOG1165|consen 178 EYRDPKTKQHIPYREHKSLSGTARYMSINTHLG-REQSRRDDLEALGHVFMYFLRGSLPWQGLKAD 242 (449)
T ss_pred hhcCccccccCccccccccccceeeeEeecccc-chhhhhhhHHHhhhhhhhhccCCCccccccCc
Confidence 8754332 3456789999999988877 67799999999999999999999999875443
No 409
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.94 E-value=7.1e-25 Score=191.34 Aligned_cols=204 Identities=25% Similarity=0.325 Sum_probs=165.5
Q ss_pred cccccccccccCcEEEEEEEECCCC-cEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCC----CCCeeeeeeeEE
Q 035861 12 EFEKLNKISEGTYGIVYRARDKKSG-EIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFD----HPSIVNVKEVVM 86 (332)
Q Consensus 12 ~y~~~~~lg~g~~g~v~~~~~~~~~-~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~----h~~i~~~~~~~~ 86 (332)
+|.+.+.||+|+||.||.+.+..++ ..+|+|+.......... .+..|..++..+. .+++..++....
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~--------~l~~E~~vl~~l~~~~~~~~~~~~~~~G~ 90 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPS--------VLKIEIQVLKKLEKKNGPSHFPKLLDHGR 90 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCc--------cchhHHHHHHHHhhhcCCCCCCEEEEecc
Confidence 8999999999999999999998764 67888888765433321 2346888888776 357778877774
Q ss_pred cCCCeEEEEcccccccHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCC-----CcEEEee
Q 035861 87 DDHDSVYMVMEYMEHDLKWLMESMK-QPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQ-----GVLKICD 160 (332)
Q Consensus 87 ~~~~~~~lv~e~~~~~l~~~~~~~~-~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~-----~~~~l~d 160 (332)
....+.++||+.++.++.+...... +.++...+..++.|++.+|.+||+.|++||||||.|+.+... ..+.|.|
T Consensus 91 ~~~~~~~iVM~l~G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~llD 170 (322)
T KOG1164|consen 91 STEDFNFIVMSLLGPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKGFIHRDIKPENFVVGQSSRSEVRTLYLLD 170 (322)
T ss_pred CCCceeEEEEeccCccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcCcccCCcCHHHeeecCCCCcccceEEEEe
Confidence 3457889999999999988776654 789999999999999999999999999999999999999865 3699999
Q ss_pred ccccc--ccC-CC----CCC---CccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChH
Q 035861 161 FGMSR--QYG-SP----LKP---YTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEV 224 (332)
Q Consensus 161 f~~~~--~~~-~~----~~~---~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~ 224 (332)
||+++ ... .. ... .....||..|+++.+..+ ...+.+.|+||++.++.++..|..||......
T Consensus 171 fGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~-~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~ 243 (322)
T KOG1164|consen 171 FGLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLG-IEQGRRDDLESLFYMLLELLKGSLPWEALEMT 243 (322)
T ss_pred cCCCccccccCCCCcccccCCCCccCCCCccccccHHHhCC-CccCCchhhhhHHHHHHHHhcCCCCCcccccc
Confidence 99998 321 11 111 223459999999998887 77899999999999999999999999765543
No 410
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.93 E-value=5.9e-27 Score=207.80 Aligned_cols=258 Identities=26% Similarity=0.418 Sum_probs=206.7
Q ss_pred cccccCcEEEEEEEE---CCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCC-CCCeeeeeeeEEcCCCeEE
Q 035861 18 KISEGTYGIVYRARD---KKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFD-HPSIVNVKEVVMDDHDSVY 93 (332)
Q Consensus 18 ~lg~g~~g~v~~~~~---~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~~ 93 (332)
.+|.|++|.|+++.. ...+.-++.|+.++......... .-..|..++..++ ||.++.+...+ +.+...+
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~------~t~~er~il~~~~~~~f~v~lhyaf-qt~~kl~ 73 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRT------HTKQERIILAFVHNTPFLVKLHYAF-QTDGKLY 73 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhccccccccccccc------ccccHHHHHhhccCCCceeeeeeee-ccccchh
Confidence 378999999998753 34577889998876554332211 2235777777775 99999998888 5558889
Q ss_pred EEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCCCCCC
Q 035861 94 MVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKP 173 (332)
Q Consensus 94 lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~~~~~ 173 (332)
+++++..|+.+.........+.+.....+...++.++.++|+.|++|+|+|++||+++.+|.+++.|||.++..-...
T Consensus 74 l~ld~~rgg~lft~l~~~~~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~-- 151 (612)
T KOG0603|consen 74 LILDFLRGGDLFTRLSKEVMFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEK-- 151 (612)
T ss_pred HhhhhcccchhhhccccCCchHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceeecccCccccCCchhhhHhHhhh--
Confidence 999999986655555556678888999999999999999999999999999999999999999999999988653221
Q ss_pred CccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCCccccc
Q 035861 174 YTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGAKA 253 (332)
Q Consensus 174 ~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (332)
..+|+..|+|||++.+ ...++|.||+|+++++++||..||.. ++...|.+.....+.
T Consensus 152 --~~cgt~eymApEI~~g---h~~a~D~ws~gvl~felltg~~pf~~----~~~~~Il~~~~~~p~-------------- 208 (612)
T KOG0603|consen 152 --IACGTYEYRAPEIING---HLSAADWWSFGVLAFELLTGTLPFGG----DTMKRILKAELEMPR-------------- 208 (612)
T ss_pred --hcccchhhhhhHhhhc---cCCcccchhhhhhHHHHhhCCCCCch----HHHHHHhhhccCCch--------------
Confidence 2289999999999873 58899999999999999999999988 555555553322222
Q ss_pred cccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCC-----HHHHhcCCCCCCCCCC--CCCCCCCCCCC
Q 035861 254 NFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRIT-----VDDALNHYWFHEVPLP--KSKDFMPTFPP 326 (332)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps-----~~ell~hp~f~~~~~~--~~~~~~~~~~~ 326 (332)
..+..+++++..++..+|..|.. +.|+.+|+||+.+.|. ..+...+.|+|
T Consensus 209 -----------------------~l~~~a~~~~~~l~~r~p~nrLg~~~~~~~eik~h~f~~~i~~~~l~~r~~~~~fkp 265 (612)
T KOG0603|consen 209 -----------------------ELSAEARSLFRQLFKRNPENRLGAGPDGVDEIKQHEFFQSIDWNELEARSRPPPFKP 265 (612)
T ss_pred -----------------------hhhHHHHHHHHHHHhhCHHHHhccCcchhHHHhccchheeeeHhhHhhcCCCCCCCC
Confidence 26888999999999999999984 5799999999999999 55778888888
Q ss_pred cccc
Q 035861 327 QHAR 330 (332)
Q Consensus 327 ~~~~ 330 (332)
..++
T Consensus 266 ~~~~ 269 (612)
T KOG0603|consen 266 GSIT 269 (612)
T ss_pred cccc
Confidence 7654
No 411
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.93 E-value=4.1e-26 Score=212.79 Aligned_cols=250 Identities=23% Similarity=0.320 Sum_probs=182.6
Q ss_pred cccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCCe
Q 035861 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHDS 91 (332)
Q Consensus 12 ~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 91 (332)
+|...+.||++.|=+|.++++.. |. |+||++.+........... +-+.|++ ....++||.+++.-.. ..+..
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~e-G~-vVvKVFvk~~p~~sL~~~~----qrL~~ik-~~l~~~pn~lPfqk~~-~t~kA 95 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDRE-GL-VVVKVFVKQDPTISLRPFK----QRLEEIK-FALMKAPNCLPFQKVL-VTDKA 95 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCC-ce-EEEEEEeccCCCCCchHHH----HHHHHHH-HHhhcCCcccchHHHH-HhhHH
Confidence 78889999999999999999863 44 9999998765333221111 1234444 5566899999998876 44477
Q ss_pred EEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccC---
Q 035861 92 VYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYG--- 168 (332)
Q Consensus 92 ~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~--- 168 (332)
.|+|-+|...+|.+.+.. ...+...+.+.|+.||+.||..+|+.||+|||||.+||||+.-..+.|+||..-+-.-
T Consensus 96 AylvRqyvkhnLyDRlST-RPFL~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPe 174 (1431)
T KOG1240|consen 96 AYLVRQYVKHNLYDRLST-RPFLVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSENILITSWNWLYLTDFASFKPTYLPE 174 (1431)
T ss_pred HHHHHHHHhhhhhhhhcc-chHHHHHHHHHHHHHHHHHHHHHHHcCccccccccceEEEeeechhhhhcccccCCccCCC
Confidence 889999999999887765 5668899999999999999999999999999999999999999999999999765331
Q ss_pred CCCCCC----ccccccccccchhhhcCCC----------CCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHH
Q 035861 169 SPLKPY----TSLVVTLWYRAPELLLGAK----------KYSTAVDMWSVGCIMAELLA-KKPLFSGTTEVDQIDKIFKT 233 (332)
Q Consensus 169 ~~~~~~----~~~~~~~~y~aPE~~~~~~----------~~~~~sDi~slG~~l~~llt-g~~pf~~~~~~~~~~~~~~~ 233 (332)
++...+ .+.....+|.|||.+.... ..+++-||||+||++.|+++ |++||.-..- -...+.
T Consensus 175 DNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LSQL----~aYr~~ 250 (1431)
T KOG1240|consen 175 DNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLSQL----LAYRSG 250 (1431)
T ss_pred CCcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHHHH----HhHhcc
Confidence 111111 2233456899999985411 25779999999999999998 5677742211 111111
Q ss_pred cCCCCCCcccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcC
Q 035861 234 LGTPTETIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNH 306 (332)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 306 (332)
....++.... ..-+..++.||..|++.||+.|.|+++.|+-
T Consensus 251 ~~~~~e~~Le--------------------------------~Ied~~~Rnlil~Mi~rdPs~RlSAedyL~~ 291 (1431)
T KOG1240|consen 251 NADDPEQLLE--------------------------------KIEDVSLRNLILSMIQRDPSKRLSAEDYLQK 291 (1431)
T ss_pred CccCHHHHHH--------------------------------hCcCccHHHHHHHHHccCchhccCHHHHHHh
Confidence 0000011100 1135678899999999999999999999986
No 412
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.93 E-value=4e-25 Score=184.64 Aligned_cols=237 Identities=22% Similarity=0.313 Sum_probs=150.9
Q ss_pred cccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCC----------CCeeee
Q 035861 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDH----------PSIVNV 81 (332)
Q Consensus 12 ~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h----------~~i~~~ 81 (332)
.+...+.||.|+++.||.+++..|++.+++|++...........+ .+.+|.-....+.+ -.++..
T Consensus 13 ~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~-----~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P 87 (288)
T PF14531_consen 13 TLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYE-----QLKEEQLAITLFPGVKNPKEAYRHLRFLVP 87 (288)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHH-----HHHHHHHGGGGSTT--SHHHHHHHH-B---
T ss_pred EEEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHH-----HHHHHHHHhhhhccCCCHHHHHHhceEEee
Confidence 677889999999999999999999999999999876632221111 23334433333221 122222
Q ss_pred eeeE-EcC----------CC-----eEEEEcccccccHHHHHHh---cCCC---CCHHHHHHHHHHHHHHHHHHHHCCcc
Q 035861 82 KEVV-MDD----------HD-----SVYMVMEYMEHDLKWLMES---MKQP---FSTSEVKCLMLQLLEGVKYLHDNWVL 139 (332)
Q Consensus 82 ~~~~-~~~----------~~-----~~~lv~e~~~~~l~~~~~~---~~~~---l~~~~~~~i~~~l~~~L~~lh~~~i~ 139 (332)
++.. +.+ .. +.+++|+.+.+++.+.+.. .... +.......+..|+++.+++||+.|++
T Consensus 88 ~d~~~i~~~~~~~~~~~~~~~~~v~n~~~l~P~~~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~GlV 167 (288)
T PF14531_consen 88 LDLLRIPGKPPFFERGPGQSIYWVLNRFLLMPRAQGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYGLV 167 (288)
T ss_dssp SEEEEETTS-SEEEECETTEEEEEESEEEEEE--SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred eEEEEEcCCCcceecCCCCccceeehhhhccchhhhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcceE
Confidence 2221 111 01 2477888888887665432 2222 33444556779999999999999999
Q ss_pred cccCCCCCEEEcCCCcEEEeecccccccCCCCCCCccccccccccchhhhcCC-------CCCCchhHHHHHHHHHHHHH
Q 035861 140 HRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGA-------KKYSTAVDMWSVGCIMAELL 212 (332)
Q Consensus 140 H~di~p~Nili~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-------~~~~~~sDi~slG~~l~~ll 212 (332)
|+||+|+|++++.+|.+.|+||+.....+... .....+..|.|||..... ..++.+.|.|+||+++|.|+
T Consensus 168 Hgdi~~~nfll~~~G~v~Lg~F~~~~r~g~~~---~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lW 244 (288)
T PF14531_consen 168 HGDIKPENFLLDQDGGVFLGDFSSLVRAGTRY---RCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLW 244 (288)
T ss_dssp EST-SGGGEEE-TTS-EEE--GGGEEETTEEE---EGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHH
T ss_pred ecccceeeEEEcCCCCEEEcChHHHeecCcee---eccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHH
Confidence 99999999999999999999999887654321 113445779999977542 24788999999999999999
Q ss_pred hCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCC
Q 035861 213 AKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTY 292 (332)
Q Consensus 213 tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~ 292 (332)
++..||........... .+....++++.+++||..+|+.
T Consensus 245 C~~lPf~~~~~~~~~~~-----------------------------------------~f~~C~~~Pe~v~~LI~~lL~~ 283 (288)
T PF14531_consen 245 CGRLPFGLSSPEADPEW-----------------------------------------DFSRCRDMPEPVQFLIRGLLQR 283 (288)
T ss_dssp HSS-STCCCGGGSTSGG-----------------------------------------GGTTSS---HHHHHHHHHHT-S
T ss_pred HccCCCCCCCccccccc-----------------------------------------cchhcCCcCHHHHHHHHHHccC
Confidence 99999976533211000 1111124899999999999999
Q ss_pred CCCCC
Q 035861 293 DPEKR 297 (332)
Q Consensus 293 dp~~R 297 (332)
+|.+|
T Consensus 284 ~~~~R 288 (288)
T PF14531_consen 284 NPEDR 288 (288)
T ss_dssp SGGGS
T ss_pred CcccC
Confidence 99987
No 413
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.92 E-value=5.5e-25 Score=191.70 Aligned_cols=170 Identities=18% Similarity=0.148 Sum_probs=125.9
Q ss_pred cchhcccccccccccCcEEEEEEEECC-CCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEE
Q 035861 8 RSVFEFEKLNKISEGTYGIVYRARDKK-SGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVM 86 (332)
Q Consensus 8 ~~~~~y~~~~~lg~g~~g~v~~~~~~~-~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~ 86 (332)
...++|.+.+.||+|+||+||+|++.. ++..+|||+........... .....+.+|++++++++|+|+++.+...
T Consensus 15 ~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~---~~~~~~~~E~~iL~~L~h~~iv~~l~~~- 90 (365)
T PRK09188 15 ALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKP---LARHLAAREIRALKTVRGIGVVPQLLAT- 90 (365)
T ss_pred cccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccH---HHHHHHHHHHHHHHhccCCCCCcEEEEc-
Confidence 456789999999999999999999876 67778999875321100000 0112467999999999999998643322
Q ss_pred cCCCeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccC-CCCCEEEcCCCcEEEeeccccc
Q 035861 87 DDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDL-KTSNLLLNNQGVLKICDFGMSR 165 (332)
Q Consensus 87 ~~~~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di-~p~Nili~~~~~~~l~df~~~~ 165 (332)
...|+||||++|+.+.... ... ...++.+++.+|.+||+.||+|||| ||+||+++.++.++|+|||+++
T Consensus 91 ---~~~~LVmE~~~G~~L~~~~----~~~---~~~~~~~i~~aL~~lH~~gIiHrDL~KP~NILv~~~~~ikLiDFGlA~ 160 (365)
T PRK09188 91 ---GKDGLVRGWTEGVPLHLAR----PHG---DPAWFRSAHRALRDLHRAGITHNDLAKPQNWLMGPDGEAAVIDFQLAS 160 (365)
T ss_pred ---CCcEEEEEccCCCCHHHhC----ccc---hHHHHHHHHHHHHHHHHCCCeeCCCCCcceEEEcCCCCEEEEECccce
Confidence 3479999999987655321 111 1467899999999999999999999 9999999999999999999998
Q ss_pred ccCCCCCCC--------ccccccccccchhhhcC
Q 035861 166 QYGSPLKPY--------TSLVVTLWYRAPELLLG 191 (332)
Q Consensus 166 ~~~~~~~~~--------~~~~~~~~y~aPE~~~~ 191 (332)
......... ....++..|.+||.+..
T Consensus 161 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~ 194 (365)
T PRK09188 161 VFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTP 194 (365)
T ss_pred ecccCcchhhhhhhhhhhhhhccCccCCcccCCh
Confidence 764322111 23456677899998753
No 414
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.92 E-value=4.5e-23 Score=181.00 Aligned_cols=268 Identities=36% Similarity=0.574 Sum_probs=205.2
Q ss_pred ccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCC-CeeeeeeeEEcCCCe
Q 035861 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHP-SIVNVKEVVMDDHDS 91 (332)
Q Consensus 13 y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~-~i~~~~~~~~~~~~~ 91 (332)
|.+...||.|+|+.||.+.+. ..+++|.+........ .....+.+|+..+..+.|+ +++.+...+ .....
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~---~~~~~k~~~~~~~~~~-----~~~~~~~~e~~~~~~~~~~~~i~~~~~~~-~~~~~ 72 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR---KLVALKVLAKKLESKS-----KEVERFLREIQILASLNHPPNIVKLYDFF-QDEGS 72 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec---cEEEEEeechhhccch-----hHHHHHHHHHHHHHHccCCcceeeEEEEE-ecCCE
Confidence 778899999999999999997 6789999876654432 1122567899999999988 799999999 44466
Q ss_pred EEEEcccccccHHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCC-cEEEeeccccccc
Q 035861 92 VYMVMEYMEHDLKWLMESMKQ---PFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQG-VLKICDFGMSRQY 167 (332)
Q Consensus 92 ~~lv~e~~~~~l~~~~~~~~~---~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~-~~~l~df~~~~~~ 167 (332)
.+++++++.+..+........ .+++.....+..|++.++.++|+.|++|+|+||+||+++..+ .++++|||.+...
T Consensus 73 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~ 152 (384)
T COG0515 73 LYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLL 152 (384)
T ss_pred EEEEEecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeecCCCCeEEEeccCcceec
Confidence 899999999765554444343 799999999999999999999999999999999999999998 7999999998755
Q ss_pred CCCCC------CCccccccccccchhhhcCC--CCCCchhHHHHHHHHHHHHHhCCCCCCCCCh---HHHHHHHHHHcCC
Q 035861 168 GSPLK------PYTSLVVTLWYRAPELLLGA--KKYSTAVDMWSVGCIMAELLAKKPLFSGTTE---VDQIDKIFKTLGT 236 (332)
Q Consensus 168 ~~~~~------~~~~~~~~~~y~aPE~~~~~--~~~~~~sDi~slG~~l~~lltg~~pf~~~~~---~~~~~~~~~~~~~ 236 (332)
..... ......++..|++||.+... ...+...|+||+|++++++++|..||..... .............
T Consensus 153 ~~~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 232 (384)
T COG0515 153 PDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPT 232 (384)
T ss_pred CCCCccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCC
Confidence 43321 24667899999999999874 5789999999999999999999999877664 2333333332221
Q ss_pred C--CCCcccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCCC
Q 035861 237 P--TETIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVPL 314 (332)
Q Consensus 237 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~ 314 (332)
+ ......... ......+.+++..++..+|..|.+..+...+++......
T Consensus 233 ~~~~~~~~~~~~-----------------------------~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~ 283 (384)
T COG0515 233 PSLASPLSPSNP-----------------------------ELISKAASDLLKKLLAKDPKNRLSSSSDLSHDLLAHLKL 283 (384)
T ss_pred cccccccCcccc-----------------------------chhhHHHHHHHHHHHhcCchhcCCHHHHhhchHhhCccc
Confidence 1 000000000 112356789999999999999999999999977776554
Q ss_pred CCCC
Q 035861 315 PKSK 318 (332)
Q Consensus 315 ~~~~ 318 (332)
....
T Consensus 284 ~~~~ 287 (384)
T COG0515 284 KESD 287 (384)
T ss_pred cccc
Confidence 4443
No 415
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.91 E-value=1.1e-23 Score=177.43 Aligned_cols=264 Identities=24% Similarity=0.305 Sum_probs=176.1
Q ss_pred ccccchhcccccccccccCcEEEEEEEECCCCc-----------------------------------EEEEEEeecccC
Q 035861 5 QGCRSVFEFEKLNKISEGTYGIVYRARDKKSGE-----------------------------------IVALKKVKMNVG 49 (332)
Q Consensus 5 ~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~-----------------------------------~v~iK~~~~~~~ 49 (332)
.+.-.+++|++.+.||+|+...||.+....++. +.|||.+.....
T Consensus 151 dskFtiddyeiG~~igkGC~AaVY~A~~~~dg~~le~~~~t~~~pgf~p~ts~p~e~~q~~~p~~~aFPLAiKmMfN~~~ 230 (598)
T KOG4158|consen 151 DSKFTIDDYEIGEFIGKGCNAAVYSARLANDGSDLESSGNTHYGPGFNPVTSIPAEIPQVSKPAQKAFPLAIKMMFNFEH 230 (598)
T ss_pred hcccchhhhcccchhhccchhhhhhhhcCCCcccccccCCCCcCCCcCCCcCCcccCCcccCccccccchHHHHhccccc
Confidence 344567799999999999999999997654221 356666654333
Q ss_pred Cccccc-----------ccCCCcc---hhHHHHHH----hh-CCCCCeeeeeeeEEcC----------------------
Q 035861 50 RKEDCL-----------EYGFPIS---SLREINIL----LS-FDHPSIVNVKEVVMDD---------------------- 88 (332)
Q Consensus 50 ~~~~~~-----------~~~~~~~---~~~e~~~l----~~-l~h~~i~~~~~~~~~~---------------------- 88 (332)
...... ..+.-.. .....+.+ .+ -+||||+.+.+.|+++
T Consensus 231 ~s~~~~iL~sM~~ElvPa~~~a~~~e~~~~t~R~l~nqtvhLa~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~ 310 (598)
T KOG4158|consen 231 DSGDAHILKSMGNELVPAPNAAKLLEGQMGTFRPLPNQTVHLAKHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPS 310 (598)
T ss_pred CCchHHHHHHhhhhccCcchhhhhcccccceeeeCCCCCcccCCCCCEEeehhhhhhhhccCCchhhhCcccccceeccc
Confidence 221100 0000000 00000011 11 1599999999888542
Q ss_pred ----CCeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEc--CCC--cEEEee
Q 035861 89 ----HDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLN--NQG--VLKICD 160 (332)
Q Consensus 89 ----~~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~--~~~--~~~l~d 160 (332)
....|+||...+.++...+.. ...+.....-++.|+++|+.|||++|++|+|+|++|||+. +|+ .+.|.|
T Consensus 311 g~g~~~tlylvMkrY~~tLr~yl~~--~~~s~r~~~~~laQlLEav~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaD 388 (598)
T KOG4158|consen 311 GAGEPKTLYLVMKRYRQTLREYLWT--RHRSYRTGRVILAQLLEAVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVAD 388 (598)
T ss_pred ccCCCceEEEehhcchhhHHHHHhc--CCCchHHHHHHHHHHHHHHHHHHHccchhhcccccceEEEecCCCCcEEEEcc
Confidence 246899999999988777765 4567888888999999999999999999999999999984 333 689999
Q ss_pred cccccccCCCC------CCCccccccccccchhhhcCCC-----CCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Q 035861 161 FGMSRQYGSPL------KPYTSLVVTLWYRAPELLLGAK-----KYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDK 229 (332)
Q Consensus 161 f~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~-----~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~ 229 (332)
||+|-.-+.-. ......-|.-.-+|||+..... -.-.++|.|+.|.+.||+++...||........-.
T Consensus 389 FGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~- 467 (598)
T KOG4158|consen 389 FGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDT- 467 (598)
T ss_pred cceeeeccccccccccccccccCCCcceecchhhhhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccchheech-
Confidence 99886432211 1122345677899999986421 12458999999999999999999997632211000
Q ss_pred HHHHcCCCCCCcccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCH---HHHhc
Q 035861 230 IFKTLGTPTETIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITV---DDALN 305 (332)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~---~ell~ 305 (332)
....+..+|. .+.-+++.+++|+..+|+.||++|+|+ .++|+
T Consensus 468 ------------------------------r~Yqe~qLPa----lp~~vpp~~rqlV~~lL~r~pskRvsp~iAANvl~ 512 (598)
T KOG4158|consen 468 ------------------------------RTYQESQLPA----LPSRVPPVARQLVFDLLKRDPSKRVSPNIAANVLN 512 (598)
T ss_pred ------------------------------hhhhhhhCCC----CcccCChHHHHHHHHHhcCCccccCCccHHHhHHH
Confidence 0011111221 122378899999999999999999984 45554
No 416
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.91 E-value=7.9e-24 Score=169.96 Aligned_cols=149 Identities=28% Similarity=0.297 Sum_probs=109.7
Q ss_pred ccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccc---c--ccCC-------------CcchhHHHHHHhhCCCC
Q 035861 15 KLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDC---L--EYGF-------------PISSLREINILLSFDHP 76 (332)
Q Consensus 15 ~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~---~--~~~~-------------~~~~~~e~~~l~~l~h~ 76 (332)
+...||+|++|+||+|... +|+.||||+++......... . ...+ ......|+..+.++.++
T Consensus 1 ~~~~ig~G~~~~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~ 79 (190)
T cd05147 1 INGCISTGKEANVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTA 79 (190)
T ss_pred CCCccccccceEEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHC
Confidence 3578999999999999986 89999999998653221110 0 0000 01123488999999877
Q ss_pred CeeeeeeeEEcCCCeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH-HHCCcccccCCCCCEEEcCCCc
Q 035861 77 SIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYL-HDNWVLHRDLKTSNLLLNNQGV 155 (332)
Q Consensus 77 ~i~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~l-h~~~i~H~di~p~Nili~~~~~ 155 (332)
++....... .. ..+|||||++|+.+.........++...+..++.|++.+|.++ |+.||+|+||||+||+++ ++.
T Consensus 80 ~v~~p~~~~-~~--~~~iVmE~i~g~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~l~H~~giiHrDlkP~NIli~-~~~ 155 (190)
T cd05147 80 GIPCPEPIL-LK--SHVLVMEFIGDDGWAAPRLKDAPLSESKARELYLQVIQIMRILYQDCRLVHADLSEYNLLYH-DGK 155 (190)
T ss_pred CCCCCcEEE-ec--CCEEEEEEeCCCCCcchhhhcCCCCHHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEE-CCc
Confidence 763322222 12 2379999999865433323356899999999999999999999 699999999999999998 478
Q ss_pred EEEeecccccccC
Q 035861 156 LKICDFGMSRQYG 168 (332)
Q Consensus 156 ~~l~df~~~~~~~ 168 (332)
++|+|||++...+
T Consensus 156 v~LiDFG~a~~~~ 168 (190)
T cd05147 156 LYIIDVSQSVEHD 168 (190)
T ss_pred EEEEEccccccCC
Confidence 9999999997543
No 417
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.90 E-value=7.7e-24 Score=169.95 Aligned_cols=246 Identities=20% Similarity=0.253 Sum_probs=187.1
Q ss_pred cchhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEc
Q 035861 8 RSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMD 87 (332)
Q Consensus 8 ~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~ 87 (332)
..+.+..++.+|.....|..|+|++. |..+++|++..+....... .++-+|...++-+.||||+++++.+ .
T Consensus 187 id~~~lnl~tkl~e~hsgelwrgrwq--gndivakil~vr~~t~ris------rdfneefp~lrifshpnilpvlgac-n 257 (448)
T KOG0195|consen 187 IDVSSLNLITKLAESHSGELWRGRWQ--GNDIVAKILNVREVTARIS------RDFNEEFPALRIFSHPNILPVLGAC-N 257 (448)
T ss_pred cchhhhhhhhhhccCCCccccccccc--Ccchhhhhhhhhhcchhhc------chhhhhCcceeeecCCchhhhhhhc-c
Confidence 35677888899999999999999998 5578889887655433322 2456888999999999999999999 5
Q ss_pred CCCeEEEEcccccc-cHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHHCC--cccccCCCCCEEEcCCCcEEEe--ec
Q 035861 88 DHDSVYMVMEYMEH-DLKWLMESMKQ-PFSTSEVKCLMLQLLEGVKYLHDNW--VLHRDLKTSNLLLNNQGVLKIC--DF 161 (332)
Q Consensus 88 ~~~~~~lv~e~~~~-~l~~~~~~~~~-~l~~~~~~~i~~~l~~~L~~lh~~~--i~H~di~p~Nili~~~~~~~l~--df 161 (332)
...+..++..|++. ++...+..... -.+..++.+++.+++.+++|||+.. |.-.-|++..++||++-+.+|+ |-
T Consensus 258 sppnlv~isq~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmidedltarismad~ 337 (448)
T KOG0195|consen 258 SPPNLVIISQYMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLTARISMADT 337 (448)
T ss_pred CCCCceEeeeeccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecchhhhheecccc
Confidence 55888999999995 44444444222 2688899999999999999999875 4556799999999998776654 32
Q ss_pred ccccccCCCCCCCccccccccccchhhhcCCCC--CCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCC
Q 035861 162 GMSRQYGSPLKPYTSLVVTLWYRAPELLLGAKK--YSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTE 239 (332)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~--~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~ 239 (332)
.++.. ..+....+.|++||.+..... .-.+.|+|||++++||+.|...||..-...+--.++.-
T Consensus 338 kfsfq-------e~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmkial------- 403 (448)
T KOG0195|consen 338 KFSFQ-------EVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKIAL------- 403 (448)
T ss_pred eeeee-------ccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhhhh-------
Confidence 22222 134455788999999975322 34579999999999999999999988776655444421
Q ss_pred CcccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHh
Q 035861 240 TIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDAL 304 (332)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell 304 (332)
...+...+|.++..+..|+.-|+..||.+||.+..|+
T Consensus 404 ----------------------------eglrv~ippgis~hm~klm~icmnedpgkrpkfdmiv 440 (448)
T KOG0195|consen 404 ----------------------------EGLRVHIPPGISRHMNKLMNICMNEDPGKRPKFDMIV 440 (448)
T ss_pred ----------------------------ccccccCCCCccHHHHHHHHHHhcCCCCcCCCcceeh
Confidence 1223334566899999999999999999999877654
No 418
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.90 E-value=1.2e-23 Score=170.63 Aligned_cols=178 Identities=15% Similarity=0.117 Sum_probs=130.0
Q ss_pred hcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccC-CCcchhHHHHHHhhCCCCCeeeeeeeEEcC-
Q 035861 11 FEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYG-FPISSLREINILLSFDHPSIVNVKEVVMDD- 88 (332)
Q Consensus 11 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~- 88 (332)
++|++++.+|.|+||.||++.. ++..+|||++.......+...+.- ....+.+|+..+.++.|++|.....++...
T Consensus 31 ~~y~~~~~l~~~~f~~v~l~~~--~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~~ 108 (232)
T PRK10359 31 YNIKTIKVFRNIDDTKVSLIDT--DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLAE 108 (232)
T ss_pred CceEEEEEecCCCceEEEEEec--CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeecc
Confidence 5899999999999999999755 366899999976554333221110 011245888899999999999988886433
Q ss_pred ------CCeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecc
Q 035861 89 ------HDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFG 162 (332)
Q Consensus 89 ------~~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~ 162 (332)
....+++|||++|..+.... .+++ ....+++.+|..+|+.|++|||++|.||+++.+| ++|+|||
T Consensus 109 ~~~~~~~~~~~lvmEyi~G~tL~~~~----~~~~----~~~~~i~~~l~~lH~~gi~H~Dikp~Nili~~~g-i~liDfg 179 (232)
T PRK10359 109 RKTLRYAHTYIMLIEYIEGVELNDMP----EISE----DVKAKIKASIESLHQHGMVSGDPHKGNFIVSKNG-LRIIDLS 179 (232)
T ss_pred cccccccCCeEEEEEEECCccHHHhh----hccH----HHHHHHHHHHHHHHHcCCccCCCChHHEEEeCCC-EEEEECC
Confidence 23588999999996554442 2333 2456999999999999999999999999999988 9999999
Q ss_pred cccccCCCCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHH
Q 035861 163 MSRQYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELL 212 (332)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~ll 212 (332)
.......... ....+.. ..+..++|+||||+++..+.
T Consensus 180 ~~~~~~e~~a------------~d~~vle-r~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 180 GKRCTAQRKA------------KDRIDLE-RHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred Ccccccchhh------------HHHHHHH-hHhcccccccceeEeehHHH
Confidence 8865422110 0112223 45668999999999876543
No 419
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.89 E-value=2.1e-23 Score=194.43 Aligned_cols=238 Identities=29% Similarity=0.414 Sum_probs=177.4
Q ss_pred chhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcC
Q 035861 9 SVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDD 88 (332)
Q Consensus 9 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 88 (332)
.-.+|+.++.|..|++|.||.++++.+.+++|.| +.++.. +++. ++..-..|.
T Consensus 81 ~e~df~~IklisngAygavylvrh~~trqrfa~k-iNkq~l-------------ilRn--ilt~a~npf----------- 133 (1205)
T KOG0606|consen 81 SESDFNTIKLISNGAYGAVYLVRHKETRQRFAMK-INKQNL-------------ILRN--ILTFAGNPF----------- 133 (1205)
T ss_pred CccccceeEeeccCCCCceeeeeccccccchhhc-ccccch-------------hhhc--cccccCCcc-----------
Confidence 3468999999999999999999999988899884 332110 1111 111112222
Q ss_pred CCeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccC
Q 035861 89 HDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYG 168 (332)
Q Consensus 89 ~~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~ 168 (332)
.| |+....+.. -++++-.. +.+++|||+.||+|+|+||+|.+|+.-|++|++|||++...-
T Consensus 134 -----vv-----gDc~tllk~-~g~lPvdm--------vla~Eylh~ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GL 194 (1205)
T KOG0606|consen 134 -----VV-----GDCATLLKN-IGPLPVDM--------VLAVEYLHSYGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGL 194 (1205)
T ss_pred -----ee-----chhhhhccc-CCCCcchh--------hHHhHhhccCCeecCCCCCCcceeeecccccccchhhhhhhh
Confidence 22 433332222 33444332 789999999999999999999999999999999999876431
Q ss_pred CC---------------CCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHH
Q 035861 169 SP---------------LKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKT 233 (332)
Q Consensus 169 ~~---------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~ 233 (332)
-. .-.....+||+.|.|||++.. ..|....|+|+||+++|+.+.|..||.+.+..+.+...+..
T Consensus 195 ms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilr-qgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd 273 (1205)
T KOG0606|consen 195 MSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILR-QGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISD 273 (1205)
T ss_pred hhccchhhhcchHHHHHHhhhccccCCccccChhhhhh-hccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhh
Confidence 00 001234589999999999887 66899999999999999999999999999999998888776
Q ss_pred cCCCCCCcccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCC---CHHHHhcCCCCC
Q 035861 234 LGTPTETIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRI---TVDDALNHYWFH 310 (332)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp---s~~ell~hp~f~ 310 (332)
...-++.. ..+++++++++.++|+.+|..|- .+.++-+|+||+
T Consensus 274 ~i~wpE~d----------------------------------ea~p~Ea~dli~~LL~qnp~~Rlgt~ga~evk~h~ff~ 319 (1205)
T KOG0606|consen 274 DIEWPEED----------------------------------EALPPEAQDLIEQLLRQNPLCRLGTGGALEVKQHGFFQ 319 (1205)
T ss_pred hccccccC----------------------------------cCCCHHHHHHHHHHHHhChHhhcccchhhhhhhcccee
Confidence 44333331 12688999999999999999997 678999999999
Q ss_pred CCCCCCCCCCCCCCCCc
Q 035861 311 EVPLPKSKDFMPTFPPQ 327 (332)
Q Consensus 311 ~~~~~~~~~~~~~~~~~ 327 (332)
.+.|-..-+....|-|+
T Consensus 320 ~LDw~~llRqkaefvpq 336 (1205)
T KOG0606|consen 320 LLDWKSLLRQKAEFVPQ 336 (1205)
T ss_pred ecccchhhhhhcccccc
Confidence 99988655555555443
No 420
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.89 E-value=1.5e-22 Score=163.19 Aligned_cols=148 Identities=23% Similarity=0.229 Sum_probs=111.1
Q ss_pred ccccccccCcEEEEEEEECCCCcEEEEEEeecccCCccccc-----ccCC-------------CcchhHHHHHHhhCCCC
Q 035861 15 KLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCL-----EYGF-------------PISSLREINILLSFDHP 76 (332)
Q Consensus 15 ~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~-----~~~~-------------~~~~~~e~~~l~~l~h~ 76 (332)
+.+.||+|++|+||+|.+. +|+.||||++........... ...+ ......|...+.++.++
T Consensus 1 ~~~~ig~G~~~~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~ 79 (190)
T cd05145 1 INGCISTGKEANVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEA 79 (190)
T ss_pred CCceeecCCCcEEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhC
Confidence 3578999999999999987 899999999987632111100 0000 01124688889899888
Q ss_pred CeeeeeeeEEcCCCeEEEEcccccccH-HHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH-CCcccccCCCCCEEEcCCC
Q 035861 77 SIVNVKEVVMDDHDSVYMVMEYMEHDL-KWLMESMKQPFSTSEVKCLMLQLLEGVKYLHD-NWVLHRDLKTSNLLLNNQG 154 (332)
Q Consensus 77 ~i~~~~~~~~~~~~~~~lv~e~~~~~l-~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~-~~i~H~di~p~Nili~~~~ 154 (332)
++.....+.... .++||||++|+. ..... ....++...+..++.|++.++.++|+ .|++|+||||+||+++ ++
T Consensus 80 ~i~~p~~~~~~~---~~lVmE~~~g~~~~~~~l-~~~~~~~~~~~~i~~~l~~~l~~lH~~~givHrDlkP~NIll~-~~ 154 (190)
T cd05145 80 GVPVPEPILLKK---NVLVMEFIGDDGSPAPRL-KDVPLEEEEAEELYEQVVEQMRRLYQEAGLVHGDLSEYNILYH-DG 154 (190)
T ss_pred CCCCceEEEecC---CEEEEEEecCCCchhhhh-hhccCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCChhhEEEE-CC
Confidence 874443333222 379999999863 22222 24568889999999999999999999 9999999999999999 79
Q ss_pred cEEEeecccccccC
Q 035861 155 VLKICDFGMSRQYG 168 (332)
Q Consensus 155 ~~~l~df~~~~~~~ 168 (332)
.++|+|||++....
T Consensus 155 ~~~liDFG~a~~~~ 168 (190)
T cd05145 155 KPYIIDVSQAVELD 168 (190)
T ss_pred CEEEEEcccceecC
Confidence 99999999998654
No 421
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.87 E-value=2.7e-21 Score=153.71 Aligned_cols=192 Identities=14% Similarity=0.075 Sum_probs=138.3
Q ss_pred ccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCC-CCCeeeeeeeEEcCCCe
Q 035861 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFD-HPSIVNVKEVVMDDHDS 91 (332)
Q Consensus 13 y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~ 91 (332)
..+...|++|+||+||.+.. .+.+++.+.+........... ...+.+|+++++++. ++++..++++ ..
T Consensus 4 ~~~~~~l~~~~f~~v~~~~~--~~~k~~~~~l~~~~~~~~~~~----~~l~~rE~~iL~~L~~~~~vP~ll~~-----~~ 72 (218)
T PRK12274 4 PAVNEPLKSDTFGRILLVRG--GERKFVRRDLSAAPWWLRGVA----WWLARREALALRQLDGLPRTPRLLHW-----DG 72 (218)
T ss_pred cccceeecCCCcceEEEeec--CCceeeecccccchhhhhhHH----HHHHHHHHHHHHhcCCCCCCCEEEEE-----cC
Confidence 35678899999999997766 477888777765544222110 012468999999995 5778888774 23
Q ss_pred EEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccC-CCCCEEEcCCCcEEEeecccccccCCC
Q 035861 92 VYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDL-KTSNLLLNNQGVLKICDFGMSRQYGSP 170 (332)
Q Consensus 92 ~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di-~p~Nili~~~~~~~l~df~~~~~~~~~ 170 (332)
.+++|+|+.|..+..... . ....++.|++.+|.++|+.||+|+|| ||.||+++.++.++|+|||++......
T Consensus 73 ~~lvmeyI~G~~L~~~~~------~-~~~~~~~qi~~~L~~lH~~GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~ 145 (218)
T PRK12274 73 RHLDRSYLAGAAMYQRPP------R-GDLAYFRAARRLLQQLHRCGVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPR 145 (218)
T ss_pred EEEEEeeecCccHHhhhh------h-hhHHHHHHHHHHHHHHHHCcCccCCCCCcceEEEcCCCCEEEEECCCceecCCc
Confidence 689999999976543221 1 12357889999999999999999999 799999999999999999999865433
Q ss_pred CCCC-------------ccccccccccchhhhcCCCCCC-chhHHHHHHHHHHHHHhCCCCCCCCC
Q 035861 171 LKPY-------------TSLVVTLWYRAPELLLGAKKYS-TAVDMWSVGCIMAELLAKKPLFSGTT 222 (332)
Q Consensus 171 ~~~~-------------~~~~~~~~y~aPE~~~~~~~~~-~~sDi~slG~~l~~lltg~~pf~~~~ 222 (332)
.... .....++.|++|+...--...+ ...+.++.|.-+|+++|+..+....+
T Consensus 146 ~~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~~ 211 (218)
T PRK12274 146 ARWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWEDN 211 (218)
T ss_pred chHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccccC
Confidence 2110 0112356677777654322334 67788999999999999999876543
No 422
>smart00090 RIO RIO-like kinase.
Probab=99.83 E-value=1.8e-20 Score=155.55 Aligned_cols=151 Identities=20% Similarity=0.123 Sum_probs=111.4
Q ss_pred cccccccccccCcEEEEEEE-ECCCCcEEEEEEeecccCCccccc-----ccC-----------CCcchhHHHHHHhhCC
Q 035861 12 EFEKLNKISEGTYGIVYRAR-DKKSGEIVALKKVKMNVGRKEDCL-----EYG-----------FPISSLREINILLSFD 74 (332)
Q Consensus 12 ~y~~~~~lg~g~~g~v~~~~-~~~~~~~v~iK~~~~~~~~~~~~~-----~~~-----------~~~~~~~e~~~l~~l~ 74 (332)
-|.+.+.||.|++|.||+|. +..+|+.||+|++........... ... ....+..|+..+.++.
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~ 108 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY 108 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 47889999999999999998 667899999999986532111000 000 0112457999998886
Q ss_pred CCC--eeeeeeeEEcCCCeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC-cccccCCCCCEEEc
Q 035861 75 HPS--IVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNW-VLHRDLKTSNLLLN 151 (332)
Q Consensus 75 h~~--i~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~-i~H~di~p~Nili~ 151 (332)
+.. +..+++. . ..++|||+++|..+.........+....+..++.|++.+|++||+.| ++|+||||+||+++
T Consensus 109 ~~~i~~p~~~~~---~--~~~lV~E~~~g~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~g~iiH~Dikp~NIli~ 183 (237)
T smart00090 109 EAGVPVPKPIAW---R--RNVLVMEFIGGDGLPAPRLKDVEPEEEEEFELYDDILEEMRKLYKEGELVHGDLSEYNILVH 183 (237)
T ss_pred hcCCCCCeeeEe---c--CceEEEEEecCCcccccccccCCcchHHHHHHHHHHHHHHHHHHhcCCEEeCCCChhhEEEE
Confidence 532 3333332 2 24799999999654433323455667778899999999999999999 99999999999999
Q ss_pred CCCcEEEeecccccccC
Q 035861 152 NQGVLKICDFGMSRQYG 168 (332)
Q Consensus 152 ~~~~~~l~df~~~~~~~ 168 (332)
++.++|+|||.+...+
T Consensus 184 -~~~i~LiDFg~a~~~~ 199 (237)
T smart00090 184 -DGKVVIIDVSQSVELD 199 (237)
T ss_pred -CCCEEEEEChhhhccC
Confidence 7899999999887543
No 423
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.83 E-value=4e-20 Score=175.40 Aligned_cols=191 Identities=24% Similarity=0.309 Sum_probs=147.7
Q ss_pred hcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCC---CCCeeeeeeeEEc
Q 035861 11 FEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFD---HPSIVNVKEVVMD 87 (332)
Q Consensus 11 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~---h~~i~~~~~~~~~ 87 (332)
..|.|.+.||.|++|+||.|.... |+.||+|+-....... .. --.+++.+|+ -+.|..+...++-
T Consensus 698 ~~~~I~~e~G~g~y~~vy~a~~~~-~~~~alK~e~P~~~WE-fY----------I~~q~~~RLk~~~~~~~~~~~~a~~~ 765 (974)
T KOG1166|consen 698 EKFCISKEIGEGSYGSVYVATHSN-GKLVALKVEKPPNPWE-FY----------ICLQVMERLKPQMLPSIMHISSAHVF 765 (974)
T ss_pred eeEEEEeeeccccceEEEEeecCC-CcEEEEEeecCCCcee-ee----------ehHHHHHhhchhhhcchHHHHHHHcc
Confidence 378999999999999999999977 9999999887654322 11 1123334444 2233333333322
Q ss_pred CCCeEEEEccccc-ccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcC-------CCcEEEe
Q 035861 88 DHDSVYMVMEYME-HDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNN-------QGVLKIC 159 (332)
Q Consensus 88 ~~~~~~lv~e~~~-~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~-------~~~~~l~ 159 (332)
. +..++|+||.+ |++++.+. ..+.+++.....++.|++..+.+||..+||||||||+|+++.. ..-++|+
T Consensus 766 ~-~~S~lv~ey~~~Gtlld~~N-~~~~m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lI 843 (974)
T KOG1166|consen 766 Q-NASVLVSEYSPYGTLLDLIN-TNKVMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFLLRREICADSDSKGLYLI 843 (974)
T ss_pred C-CcceeeeeccccccHHHhhc-cCCCCCchhhhHHHHHHHHHHHHHHhcceecccCCcceeEeecccCCCCcccceEEE
Confidence 2 44679999999 56666555 5788999999999999999999999999999999999999963 2369999
Q ss_pred ecccccccC--CCCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCC
Q 035861 160 DFGMSRQYG--SPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKP 216 (332)
Q Consensus 160 df~~~~~~~--~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~ 216 (332)
|||.+..+. ..........+|-.+-.+|...+ ..|+++.|.|.|+.+++-|+.|+.
T Consensus 844 DfG~siDm~lfp~~~~F~~~~~td~f~C~EM~~g-rpWtYq~DyfGlAa~~h~mLFG~y 901 (974)
T KOG1166|consen 844 DFGRSIDMKLFPDGTKFKAVWHTDLFDCIEMREG-RPWTYQIDYFGLAATVHVMLFGKY 901 (974)
T ss_pred ecccceeeeEcCCCcEEeeeeccccchhHHHhcC-CCCchhhhhHHHHHHHHHHHHHHH
Confidence 999987553 22344566778888999999887 899999999999999999998764
No 424
>PRK10345 hypothetical protein; Provisional
Probab=99.82 E-value=3.1e-19 Score=144.63 Aligned_cols=137 Identities=18% Similarity=0.215 Sum_probs=101.4
Q ss_pred ccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhC-----CCCCeeeeeeeEEc
Q 035861 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSF-----DHPSIVNVKEVVMD 87 (332)
Q Consensus 13 y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~ 87 (332)
+.-.+.||+|++|.||. +..++.. +||++....... ...+.+|+..++.+ .||||+.+++++.+
T Consensus 4 L~~~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~~~~--------~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et 72 (210)
T PRK10345 4 LSEQSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRGDGG--------DKEIRRELKYYAHLSRRLIDWSGIPRYYGTVET 72 (210)
T ss_pred cCCcceecCCCceEEEE--CCCCcCe-EEEEEeccccch--------HHHHHHHHHHHHHhhccCCCCcccceeeEEEEe
Confidence 34567899999999995 5555555 799887643211 12567999999999 57999999999966
Q ss_pred CC--Ce-EEEEccccc--c-cHHHHHHhcCCCCCHHHHHHHHHHHHHHH-HHHHHCCcccccCCCCCEEEcCC----CcE
Q 035861 88 DH--DS-VYMVMEYME--H-DLKWLMESMKQPFSTSEVKCLMLQLLEGV-KYLHDNWVLHRDLKTSNLLLNNQ----GVL 156 (332)
Q Consensus 88 ~~--~~-~~lv~e~~~--~-~l~~~~~~~~~~l~~~~~~~i~~~l~~~L-~~lh~~~i~H~di~p~Nili~~~----~~~ 156 (332)
+. +. +.+|+||.+ + ++.+.+ .. ..+++. ..++.+++.++ +|||+++|+|+||||+||+++.. +.+
T Consensus 73 ~~g~g~v~~~I~e~~G~~~~tL~~~l-~~-~~~~e~--~~~~~~~L~~l~~yLh~~~IvhrDlKp~NILl~~~~~~~~~~ 148 (210)
T PRK10345 73 DCGTGYVYDVIADFDGKPSITLTEFA-EQ-CRYEED--VAQLRQLLKKLKRYLLDNRIVTMELKPQNILCQRISESEVIP 148 (210)
T ss_pred CCCCeEEEEEEecCCCCcchhHHHHH-Hc-ccccHh--HHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEeccCCCCCcE
Confidence 53 23 347899954 4 555555 42 346666 35678888777 99999999999999999999743 389
Q ss_pred EEeecccc
Q 035861 157 KICDFGMS 164 (332)
Q Consensus 157 ~l~df~~~ 164 (332)
+|+|++.+
T Consensus 149 ~LiDg~G~ 156 (210)
T PRK10345 149 VVCDNIGE 156 (210)
T ss_pred EEEECCCC
Confidence 99995433
No 425
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.81 E-value=9.4e-20 Score=161.97 Aligned_cols=205 Identities=25% Similarity=0.356 Sum_probs=154.2
Q ss_pred HhhCCCCCeeeeeeeEEcCCCeEEEEccccc-ccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCc-ccccCCCCC
Q 035861 70 LLSFDHPSIVNVKEVVMDDHDSVYMVMEYME-HDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWV-LHRDLKTSN 147 (332)
Q Consensus 70 l~~l~h~~i~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i-~H~di~p~N 147 (332)
|+.+.|.|+.+++|.++++ ...++|.++|. |++.+.+....-.++.-....+.++|+.||+|+|..-| +||.+++.|
T Consensus 1 l~~l~h~n~~~f~g~~~~~-~~~~~i~~~c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~n 79 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDG-PEMIVIWEYCSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSSN 79 (484)
T ss_pred CcccchhhhhhheeeEecC-CceEEEEeeecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHhcCcceeeeeecccc
Confidence 3567899999999999777 88899999998 56777777667778999999999999999999998766 899999999
Q ss_pred EEEcCCCcEEEeecccccccCC--CCCCCccccccccccchhhhcCCC------CCCchhHHHHHHHHHHHHHhCCCCCC
Q 035861 148 LLLNNQGVLKICDFGMSRQYGS--PLKPYTSLVVTLWYRAPELLLGAK------KYSTAVDMWSVGCIMAELLAKKPLFS 219 (332)
Q Consensus 148 ili~~~~~~~l~df~~~~~~~~--~~~~~~~~~~~~~y~aPE~~~~~~------~~~~~sDi~slG~~l~~lltg~~pf~ 219 (332)
.+++....+|++|||+...... .............|.|||.+.... ..+.+.|+||+|++++|+++...||.
T Consensus 80 Clvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~~ 159 (484)
T KOG1023|consen 80 CLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGPFD 159 (484)
T ss_pred ceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCccc
Confidence 9999999999999999876632 111222223455699999987631 14678999999999999999999997
Q ss_pred CCChH----HHHHHHHHHcCCCCCCcccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCC
Q 035861 220 GTTEV----DQIDKIFKTLGTPTETIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPE 295 (332)
Q Consensus 220 ~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~ 295 (332)
..... +....+.+ .......|.+... . ...+++..++.+||..+|.
T Consensus 160 ~~~~~~~~~eii~~~~~---~~~~~~rP~i~~~--------------------------~-e~~~~l~~l~~~cw~e~P~ 209 (484)
T KOG1023|consen 160 LRNLVEDPDEIILRVKK---GGSNPFRPSIELL--------------------------N-ELPPELLLLVARCWEEIPE 209 (484)
T ss_pred cccccCChHHHHHHHHh---cCCCCcCcchhhh--------------------------h-hcchHHHHHHHHhcccChh
Confidence 63322 22233222 1111122221110 0 1455788999999999999
Q ss_pred CCCCHHHHhc
Q 035861 296 KRITVDDALN 305 (332)
Q Consensus 296 ~Rps~~ell~ 305 (332)
+||+++++-.
T Consensus 210 ~rPs~~~i~~ 219 (484)
T KOG1023|consen 210 KRPSIEQIRS 219 (484)
T ss_pred hCccHHHHHh
Confidence 9999987754
No 426
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.79 E-value=4.4e-19 Score=145.85 Aligned_cols=143 Identities=22% Similarity=0.208 Sum_probs=107.1
Q ss_pred cccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCCeEEEE
Q 035861 16 LNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHDSVYMV 95 (332)
Q Consensus 16 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~lv 95 (332)
++.||+|++|.||+|.+ .+..+++|+.....................+|+..+..+.|+++.....++... ...+++
T Consensus 1 ~~~l~~G~~~~vy~~~~--~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~-~~~~lv 77 (211)
T PRK14879 1 MKLIKRGAEAEIYLGDF--LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDP-ENFIIV 77 (211)
T ss_pred CcccccCceEEEEEEee--CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeC-CCCEEE
Confidence 35799999999999988 477899998764332221111100112356789999999888876665555343 567899
Q ss_pred cccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccc
Q 035861 96 MEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQ 166 (332)
Q Consensus 96 ~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~ 166 (332)
|||++|..+........ . ....++.+++.+|.++|+.|++|+|++|.||+++ ++.++|+|||.+..
T Consensus 78 ~e~~~G~~L~~~~~~~~---~-~~~~i~~~i~~~l~~lH~~~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 78 MEYIEGEPLKDLINSNG---M-EELELSREIGRLVGKLHSAGIIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred EEEeCCcCHHHHHHhcc---H-HHHHHHHHHHHHHHHHHhCCcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 99999855544443222 2 8889999999999999999999999999999999 78999999998875
No 427
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.78 E-value=1.8e-18 Score=140.90 Aligned_cols=139 Identities=22% Similarity=0.207 Sum_probs=100.5
Q ss_pred cccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCCeEEEEcc
Q 035861 18 KISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHDSVYMVME 97 (332)
Q Consensus 18 ~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~lv~e 97 (332)
.||+|++|.||+|.+. +..+++|+...................+.+|+.++..+.++++.....+.... ...++|||
T Consensus 1 ~ig~G~~~~vy~~~~~--~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~-~~~~lv~e 77 (199)
T TIGR03724 1 LIAKGAEAIIYLGDFL--GLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDP-DNKTIVME 77 (199)
T ss_pred CCCCCceEEEEEeecC--CccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEC-CCCEEEEE
Confidence 3899999999999864 78899998764332211110000012345799999999887654444333333 45689999
Q ss_pred cccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeeccccccc
Q 035861 98 YMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQY 167 (332)
Q Consensus 98 ~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~ 167 (332)
+++|..+......... .++.+++.+|.+||+.|++|+|++|.||+++ ++.++++|||.+...
T Consensus 78 ~~~g~~l~~~~~~~~~-------~~~~~i~~~l~~lH~~gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~~ 139 (199)
T TIGR03724 78 YIEGKPLKDVIEEGND-------ELLREIGRLVGKLHKAGIVHGDLTTSNIIVR-DDKLYLIDFGLGKYS 139 (199)
T ss_pred EECCccHHHHHhhcHH-------HHHHHHHHHHHHHHHCCeecCCCCcceEEEE-CCcEEEEECCCCcCC
Confidence 9998655444332211 7899999999999999999999999999999 789999999988653
No 428
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.78 E-value=1.6e-19 Score=157.82 Aligned_cols=177 Identities=29% Similarity=0.391 Sum_probs=129.7
Q ss_pred CeEEEEcccccccHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccc
Q 035861 90 DSVYMVMEYMEHDLKWLMESMK---QPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQ 166 (332)
Q Consensus 90 ~~~~lv~e~~~~~l~~~~~~~~---~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~ 166 (332)
.+.||.|++|.-+.+..+..+. ...+....+.++.|++.++.| +|.+|+|++|.||+...++.++|+|||+...
T Consensus 329 ~~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~~ihrdlkp~nif~~~d~q~kIgDFgl~ts 405 (516)
T KOG1033|consen 329 VYLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KGLIHRDLKPSNIFFSDDDQLKIGDFGLVTS 405 (516)
T ss_pred cchhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---ccchhhhccccccccccchhhhhhhhhheee
Confidence 3578999999965555554323 346788899999999999999 9999999999999999999999999999877
Q ss_pred cCCCC------CCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhC-CCCCCCCChHHHHHHHHHHcCCCCC
Q 035861 167 YGSPL------KPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAK-KPLFSGTTEVDQIDKIFKTLGTPTE 239 (332)
Q Consensus 167 ~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg-~~pf~~~~~~~~~~~~~~~~~~~~~ 239 (332)
..... ...+...||.+|++||.+.+ ..++.++||||||++++|+++- ...+.. ......++....|+.
T Consensus 406 ~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g-~~y~~kvdIyaLGlil~EL~~~f~T~~er----~~t~~d~r~g~ip~~ 480 (516)
T KOG1033|consen 406 QDKDETVAPAAASHTQQVGTLLYMSPEQIRG-QQYSEKVDIYALGLILAELLIQFSTQFER----IATLTDIRDGIIPPE 480 (516)
T ss_pred cccCCcccchhhhhhhcccccccCCHHHHhh-hhhhhhcchhhHHHHHHHHHHHhccHHHH----HHhhhhhhcCCCChH
Confidence 64322 24456789999999999998 7899999999999999999851 211111 111111111111111
Q ss_pred CcccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCC
Q 035861 240 TIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWF 309 (332)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f 309 (332)
.+ .+++.+ ..|+.+|+...|.+||++.+.-.|+|.
T Consensus 481 ~~----------------------------------~d~p~e-~~ll~~lls~~p~~RP~~~~~~~~~~~ 515 (516)
T KOG1033|consen 481 FL----------------------------------QDYPEE-YTLLQQLLSPSPEERPSAIEVALHEFL 515 (516)
T ss_pred Hh----------------------------------hcCcHH-HHHHHHhcCCCcccCchHHHHhhhhhc
Confidence 10 002222 389999999999999988888888775
No 429
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.77 E-value=2.7e-18 Score=139.58 Aligned_cols=145 Identities=19% Similarity=0.199 Sum_probs=106.2
Q ss_pred cccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccc--------------cCCCcchhHHHHHHhhCCCCC
Q 035861 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLE--------------YGFPISSLREINILLSFDHPS 77 (332)
Q Consensus 12 ~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~--------------~~~~~~~~~e~~~l~~l~h~~ 77 (332)
.|.+.+.||.|++|.||++... +|+.+|||++............ .........|...+..+.+++
T Consensus 16 ~~~~~~~i~~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 94 (198)
T cd05144 16 VESLGNQIGVGKESDVYLALDP-DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEG 94 (198)
T ss_pred hhhcCCccccCcceEEEEEEcC-CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcC
Confidence 3888999999999999999874 7999999998764321110000 000112456788888886664
Q ss_pred --eeeeeeeEEcCCCeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCc
Q 035861 78 --IVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGV 155 (332)
Q Consensus 78 --i~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~ 155 (332)
+...++ . ...++||||++|..+..+.. ......++.+++.++.++|+.|++|+||+|.||+++.++.
T Consensus 95 i~v~~~~~----~-~~~~lv~e~~~g~~L~~~~~------~~~~~~~~~~i~~~l~~lh~~gi~H~Dl~p~Nill~~~~~ 163 (198)
T cd05144 95 FPVPKPID----W-NRHAVVMEYIDGVELYRVRV------LEDPEEVLDEILEEIVKAYKHGIIHGDLSEFNILVDDDEK 163 (198)
T ss_pred CCCCceee----c-CCceEEEEEeCCcchhhccc------cccHHHHHHHHHHHHHHHHHCCCCcCCCCcccEEEcCCCc
Confidence 333322 1 34589999999865443321 1456778999999999999999999999999999999999
Q ss_pred EEEeecccccccC
Q 035861 156 LKICDFGMSRQYG 168 (332)
Q Consensus 156 ~~l~df~~~~~~~ 168 (332)
++|+|||.+...+
T Consensus 164 ~~liDfg~~~~~~ 176 (198)
T cd05144 164 IYIIDWPQMVSTD 176 (198)
T ss_pred EEEEECCccccCC
Confidence 9999999996654
No 430
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.75 E-value=6e-18 Score=157.53 Aligned_cols=144 Identities=19% Similarity=0.131 Sum_probs=105.6
Q ss_pred cccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCCe
Q 035861 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHDS 91 (332)
Q Consensus 12 ~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 91 (332)
.|...+.||+|+||+||++.+. +..+++|+...................+.+|++.++.++|++++....+.... ..
T Consensus 334 ~~~~~~~iG~G~~g~Vy~~~~~--~~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~-~~ 410 (535)
T PRK09605 334 RKIPDHLIGKGAEADIKKGEYL--GRDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDP-EE 410 (535)
T ss_pred ccCccceeccCCcEEEEEEeec--CccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeC-CC
Confidence 4466789999999999999876 34455555432221111100000112466899999999999988766655443 45
Q ss_pred EEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeeccccccc
Q 035861 92 VYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQY 167 (332)
Q Consensus 92 ~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~ 167 (332)
.++||||++|..+..... ....++.+++.+|.+||+.|++||||||+||++ .++.++|+|||.+...
T Consensus 411 ~~lv~E~~~g~~L~~~l~--------~~~~~~~~i~~~L~~lH~~giiHrDlkp~NILl-~~~~~~liDFGla~~~ 477 (535)
T PRK09605 411 KTIVMEYIGGKDLKDVLE--------GNPELVRKVGEIVAKLHKAGIVHGDLTTSNFIV-RDDRLYLIDFGLGKYS 477 (535)
T ss_pred CEEEEEecCCCcHHHHHH--------HHHHHHHHHHHHHHHHHhCCCccCCCChHHEEE-ECCcEEEEeCcccccC
Confidence 689999999865544332 356799999999999999999999999999999 5789999999998764
No 431
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.73 E-value=2.5e-19 Score=166.37 Aligned_cols=263 Identities=23% Similarity=0.342 Sum_probs=198.0
Q ss_pred hhcccccccccccCcEEEEEEEECC-CCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCC-CCCeeeeeeeEEc
Q 035861 10 VFEFEKLNKISEGTYGIVYRARDKK-SGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFD-HPSIVNVKEVVMD 87 (332)
Q Consensus 10 ~~~y~~~~~lg~g~~g~v~~~~~~~-~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~ 87 (332)
...|.+.+.||+|+++.|-...... +...++.|.+.... ..... ...+..|...-+.+. |.|++.+++.. .
T Consensus 19 ~~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~--~~~~~----~~~i~~e~~~~~~~s~h~n~~~~~~~~-~ 91 (601)
T KOG0590|consen 19 NSQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPP--KSEDS----SEHIDTETDIQKKLSKHSNTVHMIEPS-S 91 (601)
T ss_pred cccccccccccccccchhhhhhhcCCCcceeeccCCCCCC--Cccch----hhhcCccccccccccccccccccCCcc-C
Confidence 5589999999999999998887743 34455566555443 11111 113335666666665 99999999998 5
Q ss_pred CCCeEEEEcccccccHHHHHH-hcCC-CCCHHHHHHHHHHHHHHHHHHH-HCCcccccCCCCCEEEcCCC-cEEEeeccc
Q 035861 88 DHDSVYMVMEYMEHDLKWLME-SMKQ-PFSTSEVKCLMLQLLEGVKYLH-DNWVLHRDLKTSNLLLNNQG-VLKICDFGM 163 (332)
Q Consensus 88 ~~~~~~lv~e~~~~~l~~~~~-~~~~-~l~~~~~~~i~~~l~~~L~~lh-~~~i~H~di~p~Nili~~~~-~~~l~df~~ 163 (332)
+....++++++..|+.+.... ..+. ..+...+..++.|+..++.|+| ..++.|+||+|+|.+++..+ .+++.|||+
T Consensus 92 ~~~~~~~~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l~~s~~~l~~~df~~ 171 (601)
T KOG0590|consen 92 SPRSYLLSLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLLDESGSALKIADFGL 171 (601)
T ss_pred CCcccccccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCcccccccCCCCCccchhccCCCcccCCCchh
Confidence 558889999998876544444 3343 6888899999999999999999 99999999999999999999 999999999
Q ss_pred ccccCC-C--CCCCccccc-cccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCC
Q 035861 164 SRQYGS-P--LKPYTSLVV-TLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTE 239 (332)
Q Consensus 164 ~~~~~~-~--~~~~~~~~~-~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~ 239 (332)
++.+.. . .......+| ++.|.|||.+.+........|+||.|+++.-+++|..|+...........-...
T Consensus 172 At~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~~~~------ 245 (601)
T KOG0590|consen 172 ATAYRNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYSSWKS------ 245 (601)
T ss_pred hccccccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccccceeecc------
Confidence 987643 2 223345577 999999999887667788999999999999999999998765433210000000
Q ss_pred CcccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCC
Q 035861 240 TIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHE 311 (332)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~ 311 (332)
.-......++..++....+++.+++..+|..|.+.+++-.+||+..
T Consensus 246 --------------------------~~~~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~d~~~~~ 291 (601)
T KOG0590|consen 246 --------------------------NKGRFTQLPWNSISDQAHDLLHKILKENPSNRLSIEELKLDNWLSS 291 (601)
T ss_pred --------------------------cccccccCccccCChhhhhcccccccCCchhccccccccccccccc
Confidence 0001123344557888899999999999999999999999999999
No 432
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.73 E-value=3.2e-17 Score=132.09 Aligned_cols=141 Identities=22% Similarity=0.205 Sum_probs=97.5
Q ss_pred ccccccccCcEEEEEEEECCCCcEEEEEEeecccCCccccccc----------------CCCcchhHHHHHHhhCCCCC-
Q 035861 15 KLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEY----------------GFPISSLREINILLSFDHPS- 77 (332)
Q Consensus 15 ~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~----------------~~~~~~~~e~~~l~~l~h~~- 77 (332)
+.+.||+|++|+||+|.+. +++.||||++............. ........|...+.++.+..
T Consensus 1 ~~~~lg~G~~g~Vy~a~~~-~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~ 79 (187)
T cd05119 1 VGGPIGTGKEADVYLALDG-DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGV 79 (187)
T ss_pred CCcccccccceeEEEEECC-CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCC
Confidence 3578999999999999986 78999999987643221111100 00001124555555553332
Q ss_pred -eeeeeeeEEcCCCeEEEEccccccc-----HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH-CCcccccCCCCCEEE
Q 035861 78 -IVNVKEVVMDDHDSVYMVMEYMEHD-----LKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHD-NWVLHRDLKTSNLLL 150 (332)
Q Consensus 78 -i~~~~~~~~~~~~~~~lv~e~~~~~-----l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~-~~i~H~di~p~Nili 150 (332)
+...++. ...++||||++|+ .+..... ...+..++.+++.++.++|. .|++|+||+|+||++
T Consensus 80 ~~~~~~~~-----~~~~lv~e~~~g~~~~~~~l~~~~~------~~~~~~~~~~~~~~l~~lh~~~~ivH~Dl~p~Nili 148 (187)
T cd05119 80 PVPKPIDL-----NRHVLVMEFIGGDGIPAPRLKDVRL------LEDPEELYDQILELMRKLYREAGLVHGDLSEYNILV 148 (187)
T ss_pred CCCceEec-----CCCEEEEEEeCCCCccChhhhhhhh------cccHHHHHHHHHHHHHHHhhccCcCcCCCChhhEEE
Confidence 2333322 2358999999983 2222111 16788899999999999999 999999999999999
Q ss_pred cCCCcEEEeecccccccC
Q 035861 151 NNQGVLKICDFGMSRQYG 168 (332)
Q Consensus 151 ~~~~~~~l~df~~~~~~~ 168 (332)
+ ++.++++|||.+....
T Consensus 149 ~-~~~~~liDfg~a~~~~ 165 (187)
T cd05119 149 D-DGKVYIIDVPQAVEID 165 (187)
T ss_pred E-CCcEEEEECccccccc
Confidence 9 8999999999997653
No 433
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.71 E-value=2e-17 Score=147.40 Aligned_cols=254 Identities=21% Similarity=0.210 Sum_probs=196.8
Q ss_pred hcccccccccc--cCcEEEEEEEE--CCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhC-CCCCeeeeeeeE
Q 035861 11 FEFEKLNKISE--GTYGIVYRARD--KKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSF-DHPSIVNVKEVV 85 (332)
Q Consensus 11 ~~y~~~~~lg~--g~~g~v~~~~~--~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~ 85 (332)
..+.+.+.+|. |.+|.||.+.. ..++..+|+|.-........... .-.+|...-+.+ .|++.+..+..+
T Consensus 114 ~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~------~k~~~~~s~~~i~~~~~~v~~~~~~ 187 (524)
T KOG0601|consen 114 QRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSK------RKLREFLSHHKIDSHENPVRDSPAW 187 (524)
T ss_pred hhcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccc------cccchhhcccccCccccccccCccc
Confidence 46778889999 99999999998 78889999998544332221111 224677766666 588888877777
Q ss_pred EcCCCeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHH----HHHHHHHCCcccccCCCCCEEEcCC-CcEEEee
Q 035861 86 MDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLE----GVKYLHDNWVLHRDLKTSNLLLNNQ-GVLKICD 160 (332)
Q Consensus 86 ~~~~~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~----~L~~lh~~~i~H~di~p~Nili~~~-~~~~l~d 160 (332)
++.+..++=+|.|+.++..........+++..++..+.+..+ ||.++|..+++|.|++|.||+...+ ...+++|
T Consensus 188 -e~~~~lfiqtE~~~~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~~~~~~~kp~~i~~~~~~~s~~~~d 266 (524)
T KOG0601|consen 188 -EGSGILFIQTELCGESLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTALSHLHSNNIVHDDLKPANIFTTSDWTSCKLTD 266 (524)
T ss_pred -ccCCcceeeeccccchhHHhhhcccccCCchhhhhHHhhhhhcccccccccCCCcccccccchhheecccccceeecCC
Confidence 555888999999998888888877777999999999999999 9999999999999999999999999 7899999
Q ss_pred cccccccCCCCCCCccc-----cccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCC--ChHHHHHHHHHH
Q 035861 161 FGMSRQYGSPLKPYTSL-----VVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGT--TEVDQIDKIFKT 233 (332)
Q Consensus 161 f~~~~~~~~~~~~~~~~-----~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~--~~~~~~~~~~~~ 233 (332)
|+............... .|...|++||...+ -++..+|+|+||.++.+..++..++... ..+...+...
T Consensus 267 f~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~--l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~-- 342 (524)
T KOG0601|consen 267 FGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNG--LATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGY-- 342 (524)
T ss_pred cceeEEccCCccccceeeeecCCCCceEeChhhhcc--ccchHhhhcchhhhhHhhHhhcccccCCCCCCcccccccc--
Confidence 99988775544332222 67778999998875 6799999999999999999888777554 3332222111
Q ss_pred cCCCCCCcccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCC
Q 035861 234 LGTPTETIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHE 311 (332)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~ 311 (332)
.+.+. ....+.++...+..|++.+|-.|+++..+++|++...
T Consensus 343 ---ip~e~---------------------------------~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s 384 (524)
T KOG0601|consen 343 ---IPLEF---------------------------------CEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIHS 384 (524)
T ss_pred ---Cchhh---------------------------------hcCcchhhhhHHHHhcCcchhhhhHHHHHhccccccc
Confidence 00000 1114566667999999999999999999999999884
No 434
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.71 E-value=1.5e-16 Score=132.34 Aligned_cols=143 Identities=15% Similarity=0.160 Sum_probs=100.7
Q ss_pred cccc-ccCcEEEEEEEECCCCcEEEEEEeecccC-----CcccccccCCCcchhHHHHHHhhCCCCCe--eeeeeeEEcC
Q 035861 17 NKIS-EGTYGIVYRARDKKSGEIVALKKVKMNVG-----RKEDCLEYGFPISSLREINILLSFDHPSI--VNVKEVVMDD 88 (332)
Q Consensus 17 ~~lg-~g~~g~v~~~~~~~~~~~v~iK~~~~~~~-----~~~~~~~~~~~~~~~~e~~~l~~l~h~~i--~~~~~~~~~~ 88 (332)
..|| .|+.|+||.+... +..++||.+..... ...............+|+.++.++.|+++ +..++.....
T Consensus 37 ~~lg~~~g~gtv~~v~~~--~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~ 114 (239)
T PRK01723 37 RVVGSAKGRGTTWFVQTP--GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR 114 (239)
T ss_pred ceeecCCCCccEEEEEeC--CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence 4577 8899999998876 77899998864221 00000001112346789999999988775 4555543332
Q ss_pred CCe---EEEEcccccc-cHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccc
Q 035861 89 HDS---VYMVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMS 164 (332)
Q Consensus 89 ~~~---~~lv~e~~~~-~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~ 164 (332)
... .++|+|+++| ..+..+.. ...+++. .+.+++.+|.+||+.||+|+||||.|||++.++.++|+|||.+
T Consensus 115 ~~~~~~~~lV~e~l~G~~~L~~~l~-~~~l~~~----~~~~i~~~l~~lH~~GI~HrDlkp~NILv~~~~~v~LIDfg~~ 189 (239)
T PRK01723 115 HGLFYRADILIERIEGARDLVALLQ-EAPLSEE----QWQAIGQLIARFHDAGVYHADLNAHNILLDPDGKFWLIDFDRG 189 (239)
T ss_pred cCcceeeeEEEEecCCCCCHHHHHh-cCCCCHH----HHHHHHHHHHHHHHCCCCCCCCCchhEEEcCCCCEEEEECCCc
Confidence 222 3599999997 33433333 3455554 3578999999999999999999999999999999999999988
Q ss_pred cc
Q 035861 165 RQ 166 (332)
Q Consensus 165 ~~ 166 (332)
..
T Consensus 190 ~~ 191 (239)
T PRK01723 190 EL 191 (239)
T ss_pred cc
Confidence 75
No 435
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.62 E-value=2.3e-15 Score=116.75 Aligned_cols=132 Identities=23% Similarity=0.251 Sum_probs=106.2
Q ss_pred ccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCC--CCeeeeeeeEEcCCCeE
Q 035861 15 KLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDH--PSIVNVKEVVMDDHDSV 92 (332)
Q Consensus 15 ~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h--~~i~~~~~~~~~~~~~~ 92 (332)
+++.||.|.++.||++... +..+++|....... ...+..|+..++.+.+ ..++.++... +..+..
T Consensus 2 ~~~~i~~g~~~~v~~~~~~--~~~~~iK~~~~~~~----------~~~~~~e~~~~~~l~~~~~~~p~~~~~~-~~~~~~ 68 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTK--DEDYVLKINPSREK----------GADREREVAILQLLARKGLPVPKVLASG-ESDGWS 68 (155)
T ss_pred cceecccccccceEEEEec--CCeEEEEecCCCCc----------hhHHHHHHHHHHHHHHcCCCCCeEEEEc-CCCCcc
Confidence 4678999999999999986 46899998865432 1145688899988866 4777877766 444678
Q ss_pred EEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCCCCEEEcCCCcEEEeecccccc
Q 035861 93 YMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDN---WVLHRDLKTSNLLLNNQGVLKICDFGMSRQ 166 (332)
Q Consensus 93 ~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~---~i~H~di~p~Nili~~~~~~~l~df~~~~~ 166 (332)
++++||++|..+... +......++.+++.+|+.+|.. +++|+|++|.||+++..+.++++||+.+..
T Consensus 69 ~~v~e~~~g~~~~~~-------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~ 138 (155)
T cd05120 69 YLLMEWIEGETLDEV-------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY 138 (155)
T ss_pred EEEEEecCCeecccC-------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence 999999998643322 5667778899999999999985 799999999999999989999999998864
No 436
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.57 E-value=4.5e-14 Score=127.54 Aligned_cols=185 Identities=18% Similarity=0.335 Sum_probs=133.0
Q ss_pred cccccccccccCcEEEE-EEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCC
Q 035861 12 EFEKLNKISEGTYGIVY-RARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHD 90 (332)
Q Consensus 12 ~y~~~~~lg~g~~g~v~-~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 90 (332)
-|++ ...+-++.+ +| .|..+.++.+|.|.......... ...+.+-++.++.++||+|+.++..+.++ .
T Consensus 14 pY~l-e~~~~~~~a-~~~~~t~k~~~~~vsVF~~~~~~~~~--------~~~~~~A~k~lKtlRHP~Il~yL~t~e~~-~ 82 (690)
T KOG1243|consen 14 PYDL-EETAFSSEA-LWPDGTRKADGGPVSVFVYKRSNGEV--------TELAKRAVKRLKTLRHPNILSYLDTTEEE-G 82 (690)
T ss_pred Cccc-ccccCCCcc-cccccceeccCCceEEEEEeCCCchh--------hHHHHHHHHHhhhccCchhhhhhhhhccc-C
Confidence 3554 444444444 44 46777889999999987665411 11345788999999999999999999444 7
Q ss_pred eEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH-HCCcccccCCCCCEEEcCCCcEEEeecccccccCC
Q 035861 91 SVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLH-DNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGS 169 (332)
Q Consensus 91 ~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh-~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~ 169 (332)
..|||+|.+..-. ..+.. +....+...+.||+.||.||| +.+++||+|+-..|+|+..|.+||++|..+.....
T Consensus 83 ~~ylvTErV~Pl~-~~lk~----l~~~~v~~Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~ 157 (690)
T KOG1243|consen 83 TLYLVTERVRPLE-TVLKE----LGKEEVCLGLFQILAALSFLNDDCNLVHGNVCKDSVFVNESGEWKLGGLELVSKASG 157 (690)
T ss_pred ceEEEeeccccHH-HHHHH----hHHHHHHHHHHHHHHHHHHHhccCCeeeccEeeeeEEEcCCCcEEEeeeEEEecccc
Confidence 8999999997511 11111 226777888999999999998 67899999999999999999999999998865433
Q ss_pred CCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCC
Q 035861 170 PLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKK 215 (332)
Q Consensus 170 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~ 215 (332)
..........-..|..|+.... -....|.|.||+++++++.|.
T Consensus 158 ~~~~~~~~~~~~s~~~P~~~~~---s~~s~D~~~Lg~li~el~ng~ 200 (690)
T KOG1243|consen 158 FNAPAKSLYLIESFDDPEEIDP---SEWSIDSWGLGCLIEELFNGS 200 (690)
T ss_pred CCcccccchhhhcccChhhcCc---cccchhhhhHHHHHHHHhCcc
Confidence 2221222223334667765433 125679999999999999883
No 437
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.55 E-value=5.9e-14 Score=111.77 Aligned_cols=147 Identities=20% Similarity=0.202 Sum_probs=100.2
Q ss_pred cccccccCcEEEEEEEECC------CCcEEEEEEeecccCCccc---cc--ccC---------CCcch----hHHHHHHh
Q 035861 16 LNKISEGTYGIVYRARDKK------SGEIVALKKVKMNVGRKED---CL--EYG---------FPISS----LREINILL 71 (332)
Q Consensus 16 ~~~lg~g~~g~v~~~~~~~------~~~~v~iK~~~~~~~~~~~---~~--~~~---------~~~~~----~~e~~~l~ 71 (332)
...||.|-.+.||.|.... .+..+|||+.+.....-.. .. +.. ....+ .+|...|+
T Consensus 2 ~g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~ 81 (197)
T cd05146 2 NGCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLK 81 (197)
T ss_pred CCccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHH
Confidence 4679999999999998653 3578999999754321110 00 000 01122 27888888
Q ss_pred hCCCC--CeeeeeeeEEcCCCeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH-HHCCcccccCCCCCE
Q 035861 72 SFDHP--SIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYL-HDNWVLHRDLKTSNL 148 (332)
Q Consensus 72 ~l~h~--~i~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~l-h~~~i~H~di~p~Ni 148 (332)
++... ++...+.. ...+||||+++++.+-.-.-.+..+++.....+..+++.+|..| |+.|++||||++.||
T Consensus 82 rl~~~Gv~vP~pi~~-----~~~~lvME~Ig~~~~~~~~Lkd~~~~~~~~~~i~~~i~~~l~~l~H~~glVHGDLs~~NI 156 (197)
T cd05146 82 RMQKAGIPCPEVVVL-----KKHVLVMSFIGDDQVPAPKLKDAKLNDEEMKNAYYQVLSMMKQLYKECNLVHADLSEYNM 156 (197)
T ss_pred HHHHcCCCCCeEEEe-----cCCEEEEEEcCCCCccchhhhccccCHHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHE
Confidence 88433 33333332 23479999998742111111133456667788899999999998 899999999999999
Q ss_pred EEcCCCcEEEeecccccccC
Q 035861 149 LLNNQGVLKICDFGMSRQYG 168 (332)
Q Consensus 149 li~~~~~~~l~df~~~~~~~ 168 (332)
+++ ++.+.|+||+.+...+
T Consensus 157 L~~-~~~v~iIDF~qav~~~ 175 (197)
T cd05146 157 LWH-DGKVWFIDVSQSVEPT 175 (197)
T ss_pred EEE-CCcEEEEECCCceeCC
Confidence 997 4789999999887654
No 438
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.52 E-value=1e-14 Score=137.26 Aligned_cols=280 Identities=25% Similarity=0.301 Sum_probs=200.2
Q ss_pred chhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcC
Q 035861 9 SVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDD 88 (332)
Q Consensus 9 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 88 (332)
..+.+.+.+.+-+|+++.++.+.-..++...++|+......-..... .+++.+-..+-.-.+|.++.....+ ..
T Consensus 802 S~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~-----~s~r~~s~~~i~p~~P~v~~~~~s~-~~ 875 (1205)
T KOG0606|consen 802 SPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDY-----ESIRSKSNILITPRSPAVVRSFPSF-PC 875 (1205)
T ss_pred CCccceecccccCCCCcccccCCccccccccchhhhccchhhccccc-----cccCCccCccccCCCCceecccCCC-CC
Confidence 56688888999999999999998888886666665543221111000 1122233332223345555444332 23
Q ss_pred CCeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccC
Q 035861 89 HDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYG 168 (332)
Q Consensus 89 ~~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~ 168 (332)
....++++++++|+-+.....+.+..+++.+......+.+++++||...+.|+|++|.|+++..+|..++.||+.....+
T Consensus 876 rsP~~L~~~~~~~~~~~Skl~~~~~~saepaRs~i~~~vqs~e~L~s~~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg 955 (1205)
T KOG0606|consen 876 RSPLPLVGHYLNGGDLPSKLHNSGCLSAEPARSPILERVQSLESLHSSLRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVG 955 (1205)
T ss_pred CCCcchhhHHhccCCchhhhhcCCCcccccccchhHHHHhhhhccccchhhcccccccchhhcccCCcccCccccccccc
Confidence 35678999999864333333335567888888888899999999999999999999999999999999999997432110
Q ss_pred -------C------------------------CCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCC
Q 035861 169 -------S------------------------PLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPL 217 (332)
Q Consensus 169 -------~------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~p 217 (332)
. +........+++.|.+||...+ ......+|.|++|+++++.++|..|
T Consensus 956 ~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg-~~hgs~ad~~~~g~~l~e~l~g~pp 1034 (1205)
T KOG0606|consen 956 LIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLG-RRHGSAADWWSSGVCLFEVLTGIPP 1034 (1205)
T ss_pred cccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCccccc-ccCCCcchhhhhhhhhhhhhcCCCC
Confidence 0 0011223467889999999887 6788899999999999999999999
Q ss_pred CCCCChHHHHHHHHHHcCCCCCCcccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCC
Q 035861 218 FSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKR 297 (332)
Q Consensus 218 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R 297 (332)
|.........+.+.+..... +. .....+.++++++..++..+|.+|
T Consensus 1035 ~na~tpq~~f~ni~~~~~~~-----p~-----------------------------g~~~~s~~aq~~~~~ll~~~~~qr 1080 (1205)
T KOG0606|consen 1035 FNAETPQQIFENILNRDIPW-----PE-----------------------------GPEEGSYEAQDLINRLLTEEPTQR 1080 (1205)
T ss_pred CCCcchhhhhhccccCCCCC-----CC-----------------------------CccccChhhhhhhhhhhccCchhc
Confidence 99988777665554321111 10 112268889999999999999999
Q ss_pred CCHH---HHhcCCCCCCCCCCCCCCCCCCCCCccc
Q 035861 298 ITVD---DALNHYWFHEVPLPKSKDFMPTFPPQHA 329 (332)
Q Consensus 298 ps~~---ell~hp~f~~~~~~~~~~~~~~~~~~~~ 329 (332)
..+. ++-.|+||+...|.........|-|+..
T Consensus 1081 ~~a~~~~e~k~~~~~~~~~~~~l~~q~~~~~p~~~ 1115 (1205)
T KOG0606|consen 1081 LGAKGAAEVKGHPFFQDVDWENLALQKAEFVPQPE 1115 (1205)
T ss_pred cCcccccccccCCccCCCCccccccccCccCCCCC
Confidence 9888 9999999999999988777777777654
No 439
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.51 E-value=1e-13 Score=106.16 Aligned_cols=150 Identities=24% Similarity=0.241 Sum_probs=111.2
Q ss_pred ccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCCeEEE
Q 035861 15 KLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHDSVYM 94 (332)
Q Consensus 15 ~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~l 94 (332)
.+..+-+|+.+.|+++.+. |+.++||.-..+.........+-...+-.+|++.+.++.--.|..-.-++++. ..-.|
T Consensus 11 ~l~likQGAEArv~~~~~~--Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~-~~~~i 87 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSFS--GEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDT-YGGQI 87 (229)
T ss_pred cceeeeccceeeEeeeccC--CceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEec-CCCeE
Confidence 6778899999999999887 88888887666555444444444445667899999888655554433334333 44579
Q ss_pred Ecccccc--cHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCC---cEEEeeccccccc
Q 035861 95 VMEYMEH--DLKWLMESMK-QPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQG---VLKICDFGMSRQY 167 (332)
Q Consensus 95 v~e~~~~--~l~~~~~~~~-~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~---~~~l~df~~~~~~ 167 (332)
+||+++| ++.+.+...- ..........++.+|-+.+.-||.++|+||||..+||++..++ .+.++|||++...
T Consensus 88 ~ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~ndiiHGDLTTSNill~~~~~~~~~~lIdfgls~~s 166 (229)
T KOG3087|consen 88 YMEFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDNDIIHGDLTTSNILLRSDGNQITPILIDFGLSSVS 166 (229)
T ss_pred EEEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhCCeecccccccceEEecCCCcCceEEEeecchhcc
Confidence 9999999 5555555433 3334444478999999999999999999999999999998766 4689999988653
No 440
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.51 E-value=1.2e-13 Score=106.18 Aligned_cols=140 Identities=24% Similarity=0.213 Sum_probs=98.6
Q ss_pred ccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCCeEEEEc
Q 035861 17 NKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHDSVYMVM 96 (332)
Q Consensus 17 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~lv~ 96 (332)
..+++|+-+.+|.+.+. |.++++|.=..+........+.-....-.+|+.++.++.--.+..-.-+.++. ....|+|
T Consensus 2 ~~i~~GAEa~i~~~~~~--g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~-~~~~I~m 78 (204)
T COG3642 2 DLIKQGAEAIIYLTDFL--GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDP-DNGLIVM 78 (204)
T ss_pred chhhCCcceeEEeeecc--CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcC-CCCEEEE
Confidence 45789999999999875 65677776555444443333322233456899999888654443322222233 5567999
Q ss_pred ccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeeccccccc
Q 035861 97 EYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQY 167 (332)
Q Consensus 97 e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~ 167 (332)
||++|.++....... . ..++..+-..+.-||..||+||||.++||++...+ +.++|||++...
T Consensus 79 e~I~G~~lkd~l~~~---~----~~~~r~vG~~vg~lH~~givHGDLTtsNiIl~~~~-i~~IDfGLg~~s 141 (204)
T COG3642 79 EYIEGELLKDALEEA---R----PDLLREVGRLVGKLHKAGIVHGDLTTSNIILSGGR-IYFIDFGLGEFS 141 (204)
T ss_pred EEeCChhHHHHHHhc---c----hHHHHHHHHHHHHHHhcCeecCCCccceEEEeCCc-EEEEECCccccc
Confidence 999998877554433 2 44666666777789999999999999999999854 999999998754
No 441
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.49 E-value=3.3e-14 Score=117.88 Aligned_cols=209 Identities=19% Similarity=0.212 Sum_probs=142.5
Q ss_pred HHHhhCCCCCeeeeeeeEEc----CCCeEEEEccccccc-H---HHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--
Q 035861 68 NILLSFDHPSIVNVKEVVMD----DHDSVYMVMEYMEHD-L---KWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNW-- 137 (332)
Q Consensus 68 ~~l~~l~h~~i~~~~~~~~~----~~~~~~lv~e~~~~~-l---~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~-- 137 (332)
..+-++-|.||++++.++.+ +.....++.||+..+ + +.....+...+......+|+.||+.||.|||+..
T Consensus 119 dnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~Pp 198 (458)
T KOG1266|consen 119 DNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDPP 198 (458)
T ss_pred HHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCCc
Confidence 33445579999999999843 224578899999853 3 3333445677999999999999999999999886
Q ss_pred cccccCCCCCEEEcCCCcEEEeecccccccCC----CCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHh
Q 035861 138 VLHRDLKTSNLLLNNQGVLKICDFGMSRQYGS----PLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA 213 (332)
Q Consensus 138 i~H~di~p~Nili~~~~~~~l~df~~~~~~~~----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~llt 213 (332)
|+||++.-+.|++..+|-+|++--........ .........+.+.|.+||.=.. ...+-++|||++|+...+|.-
T Consensus 199 iihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~-tn~~~a~dIy~fgmcAlemai 277 (458)
T KOG1266|consen 199 IIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTT-TNTTGASDIYKFGMCALEMAI 277 (458)
T ss_pred cccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcc-cccccchhhhhhhHHHHHHHH
Confidence 99999999999999999888864322211100 0001112234567889986544 456789999999999999988
Q ss_pred CCCCCCCCChH-HHHHHHHHHcCCCCCCcccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCC
Q 035861 214 KKPLFSGTTEV-DQIDKIFKTLGTPTETIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTY 292 (332)
Q Consensus 214 g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~ 292 (332)
+..-....... ..-..+.+..- ++ -...-++++.+|++.
T Consensus 278 lEiq~tnseS~~~~ee~ia~~i~--------~l--------------------------------en~lqr~~i~kcl~~ 317 (458)
T KOG1266|consen 278 LEIQSTNSESKVEVEENIANVII--------GL--------------------------------ENGLQRGSITKCLEG 317 (458)
T ss_pred heeccCCCcceeehhhhhhhhee--------ec--------------------------------cCccccCcCcccccC
Confidence 77654332111 11111111000 00 011123789999999
Q ss_pred CCCCCCCHHHHhcCCCCCCCCCCCC
Q 035861 293 DPEKRITVDDALNHYWFHEVPLPKS 317 (332)
Q Consensus 293 dp~~Rps~~ell~hp~f~~~~~~~~ 317 (332)
.|..||++.+++.||-+-++++...
T Consensus 318 eP~~rp~ar~llfHpllfeVhslkl 342 (458)
T KOG1266|consen 318 EPNGRPDARLLLFHPLLFEVHSLKL 342 (458)
T ss_pred CCCCCcchhhhhcCceeeecchHHH
Confidence 9999999999999999888775544
No 442
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.49 E-value=2e-13 Score=123.34 Aligned_cols=149 Identities=19% Similarity=0.215 Sum_probs=98.3
Q ss_pred cccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccc----------------c----------------ccCCCcch
Q 035861 16 LNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDC----------------L----------------EYGFPISS 63 (332)
Q Consensus 16 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~----------------~----------------~~~~~~~~ 63 (332)
.+.||.|++|+||+|+.. +|+.||||+.+......-.. . ....+.++
T Consensus 122 ~~plasaSigQVh~A~l~-~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf 200 (437)
T TIGR01982 122 EKPLAAASIAQVHRARLV-DGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDL 200 (437)
T ss_pred CcceeeeehhheEEEEec-CCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCH
Confidence 367999999999999875 68999999986543111000 0 00001134
Q ss_pred hHHHHHHhhC----CCCCeeeeeeeEEcCCCeEEEEcccccccHHHHHHhc-CCCCCHHHHHHHHHHHHH-HHHHHHHCC
Q 035861 64 LREINILLSF----DHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESM-KQPFSTSEVKCLMLQLLE-GVKYLHDNW 137 (332)
Q Consensus 64 ~~e~~~l~~l----~h~~i~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~-~~~l~~~~~~~i~~~l~~-~L~~lh~~~ 137 (332)
..|+..+.++ .+.+-+.+..++.+-....++||||++|..+...... .... ....++..++. .+..+|..|
T Consensus 201 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~~---~~~~ia~~~~~~~l~ql~~~g 277 (437)
T TIGR01982 201 RREAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEAGL---DRKALAENLARSFLNQVLRDG 277 (437)
T ss_pred HHHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhcCC---CHHHHHHHHHHHHHHHHHhCC
Confidence 4566655555 2333344444443333456899999998654433321 1122 23456666665 467899999
Q ss_pred cccccCCCCCEEEcCCCcEEEeecccccccC
Q 035861 138 VLHRDLKTSNLLLNNQGVLKICDFGMSRQYG 168 (332)
Q Consensus 138 i~H~di~p~Nili~~~~~~~l~df~~~~~~~ 168 (332)
++|+|++|.||+++.++.++++|||.+...+
T Consensus 278 ~~H~D~hPgNilv~~~g~i~liDfG~~~~l~ 308 (437)
T TIGR01982 278 FFHADLHPGNIFVLKDGKIIALDFGIVGRLS 308 (437)
T ss_pred ceeCCCCcccEEECCCCcEEEEeCCCeeECC
Confidence 9999999999999999999999999987654
No 443
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.48 E-value=3.1e-14 Score=127.18 Aligned_cols=257 Identities=21% Similarity=0.236 Sum_probs=185.1
Q ss_pred cccchhcccccccccccCcEEEEEEEEC-CCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhC-CCCCeeeeee
Q 035861 6 GCRSVFEFEKLNKISEGTYGIVYRARDK-KSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSF-DHPSIVNVKE 83 (332)
Q Consensus 6 ~~~~~~~y~~~~~lg~g~~g~v~~~~~~-~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~ 83 (332)
..+...+|..+..||.|.|+.|+..... .++..|++|-............ .-+.|+.+...+ .|.+.+.+..
T Consensus 260 ~s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di------~sl~ev~l~~~l~~~~~~~g~~~ 333 (524)
T KOG0601|consen 260 TSCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDI------FSLGEVILEAILGSHLPSVGKNS 333 (524)
T ss_pred ceeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhh------cchhhhhHhhHhhcccccCCCCC
Confidence 3456679999999999999999998766 6778899988765443322111 124566666655 5888888888
Q ss_pred eEEcCCCeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCC-CcEEEeecc
Q 035861 84 VVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQ-GVLKICDFG 162 (332)
Q Consensus 84 ~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~-~~~~l~df~ 162 (332)
.+.+. ...|+=.|+|+|............+++...+.+..|++.++.++|+..++|+|++|+||++..+ +..+++||+
T Consensus 334 ~W~~~-r~~~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s~~~~~~d~~psni~i~~~~~~~~~~~~~ 412 (524)
T KOG0601|consen 334 SWSQL-RQGYIPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIHSKLFVHLDVKPSNILISNDGFFSKLGDFG 412 (524)
T ss_pred Ccccc-ccccCchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhccccccchhhhcccccccceeeccchhhhhccccc
Confidence 77555 5566999999876655555545668999999999999999999999999999999999999987 788999999
Q ss_pred cccccCCCCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcc
Q 035861 163 MSRQYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIW 242 (332)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 242 (332)
..+.... ........+..|-..|.+.....+..+.|++|||+-+.+.+++...-.....+..+.
T Consensus 413 ~~t~~~~--~~~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~~~~~i~-------------- 476 (524)
T KOG0601|consen 413 CWTRLAF--SSGVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGVQSLTIR-------------- 476 (524)
T ss_pred cccccce--ecccccccccccccchhhccccccccccccccccccccccccCcccCcccccceeee--------------
Confidence 8864321 111122223333135666665788999999999999999998876654443322111
Q ss_pred cCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCC
Q 035861 243 PGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHE 311 (332)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~ 311 (332)
.......+.....+..+.+.++..++..||++.++..|.=|-.
T Consensus 477 --------------------------~~~~p~~~~~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~~~~~ 519 (524)
T KOG0601|consen 477 --------------------------SGDTPNLPGLKLQLQVLLKVMINPDRKRRPSAVELSLHSEFYR 519 (524)
T ss_pred --------------------------cccccCCCchHHhhhhhhhhhcCCccccchhhhhhcccchhhh
Confidence 0111112224466778889999999999999999998876644
No 444
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.47 E-value=2.2e-13 Score=107.93 Aligned_cols=129 Identities=16% Similarity=0.108 Sum_probs=93.0
Q ss_pred cccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCCeEEEE
Q 035861 16 LNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHDSVYMV 95 (332)
Q Consensus 16 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~lv 95 (332)
++.++.|..+.||++... +..+++|+........ .....|+..++.+...++++-.-.+.. ...++|
T Consensus 3 ~~~l~~G~~~~vy~~~~~--~~~~~lK~~~~~~~~~---------~~~~~E~~~l~~l~~~~~~P~~~~~~~--~~~~lv 69 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVA--NKKYVVRIPGNGTELL---------INRENEAENSKLAAEAGIGPKLYYFDP--ETGVLI 69 (170)
T ss_pred eeecCCcccCceEEEEEC--CeEEEEEeCCCCcccc---------cCHHHHHHHHHHHHHhCCCCceEEEeC--CCCeEE
Confidence 467899999999999876 7789999875442110 123578888888865554443323322 234799
Q ss_pred cccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCc-----ccccCCCCCEEEcCCCcEEEeecccccc
Q 035861 96 MEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWV-----LHRDLKTSNLLLNNQGVLKICDFGMSRQ 166 (332)
Q Consensus 96 ~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i-----~H~di~p~Nili~~~~~~~l~df~~~~~ 166 (332)
||+++|..+... ......+..+++.+|+.||+.++ +|||++|.||+++ ++.++++||+.+..
T Consensus 70 ~e~i~G~~l~~~--------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~ 136 (170)
T cd05151 70 TEFIEGSELLTE--------DFSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGM 136 (170)
T ss_pred EEecCCCccccc--------cccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccC
Confidence 999999653321 11123456899999999999885 9999999999999 67899999998764
No 445
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.47 E-value=9.2e-14 Score=127.03 Aligned_cols=152 Identities=18% Similarity=0.171 Sum_probs=98.4
Q ss_pred chhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCc--------------------c------------cccc
Q 035861 9 SVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRK--------------------E------------DCLE 56 (332)
Q Consensus 9 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~--------------------~------------~~~~ 56 (332)
.+.+|+. +.||+|++|+||+|+.+.+|+.||||+.+...... . ....
T Consensus 118 ~F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~ 196 (537)
T PRK04750 118 WFDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKT 196 (537)
T ss_pred HHHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHH
Confidence 3456776 89999999999999998889999999998542110 0 0000
Q ss_pred cCCCcchhHHHHHHhhCC----CCCeeeeeeeEEcCCCeEEEEcccccccHHHHHHh-cCCC-----CCHHHHHHHHHHH
Q 035861 57 YGFPISSLREINILLSFD----HPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMES-MKQP-----FSTSEVKCLMLQL 126 (332)
Q Consensus 57 ~~~~~~~~~e~~~l~~l~----h~~i~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~-~~~~-----l~~~~~~~i~~~l 126 (332)
...+.++..|+..+.++. +...+.+..++.+-....++||||+.|..+..+.. .... +.+..+..++.|
T Consensus 197 l~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Q- 275 (537)
T PRK04750 197 LHDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQ- 275 (537)
T ss_pred HHHhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHH-
Confidence 001123445555555552 44444555555333345689999999865443321 1122 233333333344
Q ss_pred HHHHHHHHHCCcccccCCCCCEEEcCCC----cEEEeecccccccC
Q 035861 127 LEGVKYLHDNWVLHRDLKTSNLLLNNQG----VLKICDFGMSRQYG 168 (332)
Q Consensus 127 ~~~L~~lh~~~i~H~di~p~Nili~~~~----~~~l~df~~~~~~~ 168 (332)
+...|++|+|++|.||+++.+| +++++|||.+...+
T Consensus 276 ------if~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~ 315 (537)
T PRK04750 276 ------VFRDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLN 315 (537)
T ss_pred ------HHhCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECC
Confidence 4469999999999999999988 99999999987653
No 446
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=99.45 E-value=5.8e-12 Score=110.86 Aligned_cols=213 Identities=15% Similarity=0.175 Sum_probs=155.7
Q ss_pred CcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEc---CCCeEEEEcccc
Q 035861 23 TYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMD---DHDSVYMVMEYM 99 (332)
Q Consensus 23 ~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---~~~~~~lv~e~~ 99 (332)
-..+.|++..+.+|..|++|.+...+.... .....-++.++++.|+|++++.+++.. ++..+++|++|.
T Consensus 288 ~~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~--------nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYy 359 (655)
T KOG3741|consen 288 FSITTYKATSNVDGNAYVLKRLHGDRDQST--------NKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYY 359 (655)
T ss_pred ccceeEeeeeccCCceeeeeeeccccccCc--------ccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecC
Confidence 346799999999999999999943322111 122356888999999999999999853 346789999999
Q ss_pred cc--cHHHHHHhc--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeeccc
Q 035861 100 EH--DLKWLMESM--------------KQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGM 163 (332)
Q Consensus 100 ~~--~l~~~~~~~--------------~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~ 163 (332)
++ +|.+..... +...+|..+|.++.||..||.++|+.|++..-|.+.+|+++++.+++|+..|.
T Consensus 360 P~s~TL~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssGLAck~L~~~kIlv~G~~RIriS~C~i 439 (655)
T KOG3741|consen 360 PSSPTLYDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSGLACKTLDLKKILVTGKMRIRISGCGI 439 (655)
T ss_pred CCCchHHHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcCceeecccHhHeEeeCcceEEEecccc
Confidence 86 455544321 23478899999999999999999999999999999999999999999998887
Q ss_pred ccccCCCCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCC-CChHHH-HHHHHHHcCCCCCCc
Q 035861 164 SRQYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSG-TTEVDQ-IDKIFKTLGTPTETI 241 (332)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~-~~~~~~-~~~~~~~~~~~~~~~ 241 (332)
........ . |-+.. -.+.|.=.||.++..+.||..--.. ...... ...+...
T Consensus 440 ~Dvl~~d~------------~--~~le~----~Qq~D~~~lG~ll~aLAt~~~ns~~~d~~~~s~~~~I~~~-------- 493 (655)
T KOG3741|consen 440 MDVLQEDP------------T--EPLES----QQQNDLRDLGLLLLALATGTENSNRTDSTQSSHLTRITTT-------- 493 (655)
T ss_pred eeeecCCC------------C--cchhH----HhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHhhhh--------
Confidence 76654321 0 11222 3467999999999999999643211 111111 2222221
Q ss_pred ccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcC
Q 035861 242 WPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNH 306 (332)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 306 (332)
++.+++++|.-+....+++ -++.+++.+
T Consensus 494 ------------------------------------yS~D~rn~v~yl~s~~~~~-ksI~~llp~ 521 (655)
T KOG3741|consen 494 ------------------------------------YSTDLRNVVEYLESLNFRE-KSIQDLLPM 521 (655)
T ss_pred ------------------------------------hhHHHHHHHHHHHhcCccc-ccHHHHHHH
Confidence 7888888999888888877 677777765
No 447
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.36 E-value=3.9e-13 Score=122.01 Aligned_cols=157 Identities=24% Similarity=0.337 Sum_probs=114.5
Q ss_pred HHHHHHH-HCCcccccCCCCCEEEcCCCcEEEeecccccccCCCCCCC----c-----cccccccccchhhhcCCCCCCc
Q 035861 128 EGVKYLH-DNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPY----T-----SLVVTLWYRAPELLLGAKKYST 197 (332)
Q Consensus 128 ~~L~~lh-~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~~~~~~----~-----~~~~~~~y~aPE~~~~~~~~~~ 197 (332)
.|+.++| +.+++|++|.|++|.++..+.+|++.|+++.....+.... . .......|.|||.+.. ...+.
T Consensus 110 dgl~flh~sAk~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~-~~~~~ 188 (700)
T KOG2137|consen 110 DGLAFLHRSAKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLG-TTNTP 188 (700)
T ss_pred chhhhhccCcceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhcc-ccccc
Confidence 8999999 4589999999999999999999999999887654322211 1 1122456999999987 77899
Q ss_pred hhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCCccccccccCCchhhhhhhCCCCccCCCC
Q 035861 198 AVDMWSVGCIMAELLA-KKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSP 276 (332)
Q Consensus 198 ~sDi~slG~~l~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (332)
++|+||+|+++|.+.. |..-+...+....+...... .......-+.
T Consensus 189 ~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~~~~~~---------------------------------~~~~~~~~s~ 235 (700)
T KOG2137|consen 189 ASDVFSLGVLIYTIYNGGKSIIAANGGLLSYSFSRNL---------------------------------LNAGAFGYSN 235 (700)
T ss_pred cccceeeeeEEEEEecCCcchhhccCCcchhhhhhcc---------------------------------cccccccccc
Confidence 9999999999999984 55444444332222211110 0011111124
Q ss_pred CCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCCCCCCC
Q 035861 277 VLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVPLPKSK 318 (332)
Q Consensus 277 ~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~~~~ 318 (332)
.+++++++=+.+++..++.-||++.+++..|||.+......+
T Consensus 236 ~~p~el~~~l~k~l~~~~~~rp~~~~l~~~~ff~D~~~~aLr 277 (700)
T KOG2137|consen 236 NLPSELRESLKKLLNGDSAVRPTLDLLLSIPFFSDPGLKALR 277 (700)
T ss_pred cCcHHHHHHHHHHhcCCcccCcchhhhhcccccCCchhhhhh
Confidence 589999999999999999999999999999999997655443
No 448
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=99.35 E-value=6.6e-11 Score=101.95 Aligned_cols=256 Identities=13% Similarity=0.079 Sum_probs=159.5
Q ss_pred cccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhC-CCCCeeeeeee-----EE-
Q 035861 14 EKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSF-DHPSIVNVKEV-----VM- 86 (332)
Q Consensus 14 ~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~-----~~- 86 (332)
.....||+|+.+.+|-.-. -...+.|++........ .+....|... .||-+..-+.+ +.
T Consensus 14 ~~gr~LgqGgea~ly~l~e---~~d~VAKIYh~Pppa~~-----------aqk~a~la~~p~~p~~~~rvaWPqa~L~G~ 79 (637)
T COG4248 14 PPGRPLGQGGEADLYTLGE---VRDQVAKIYHAPPPAAQ-----------AQKVAELAATPDAPLLNYRVAWPQATLHGG 79 (637)
T ss_pred CCCccccCCccceeeecch---hhchhheeecCCCchHH-----------HHHHHHhccCCCCcchhhhhcccHHHhhCC
Confidence 4567799999999997633 23356788765443221 1233333333 45533221111 11
Q ss_pred cCCCeEEEEccccccc--HHHHHHh-----cCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEe
Q 035861 87 DDHDSVYMVMEYMEHD--LKWLMES-----MKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKIC 159 (332)
Q Consensus 87 ~~~~~~~lv~e~~~~~--l~~~~~~-----~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~ 159 (332)
.......+.|..+.|- ....... .-....+..+.++++.|+.+-+.||..|.+-||++++|+||++++.|.|.
T Consensus 80 ~~~~~iGflmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~Gh~vGDVn~~~~lVsd~~~V~LV 159 (637)
T COG4248 80 RRGKVIGFLMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEHGHVVGDVNQNSFLVSDDSKVVLV 159 (637)
T ss_pred CccceeEEecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhcCCcccccCccceeeecCceEEEE
Confidence 1223378889998873 2222211 12347899999999999999999999999999999999999999999999
Q ss_pred ecccccccCCCCCCCccccccccccchhhhcC----CCCCCchhHHHHHHHHHHHHHhC-CCCCCCCChHHHHHHHHHHc
Q 035861 160 DFGMSRQYGSPLKPYTSLVVTLWYRAPELLLG----AKKYSTAVDMWSVGCIMAELLAK-KPLFSGTTEVDQIDKIFKTL 234 (332)
Q Consensus 160 df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~----~~~~~~~sDi~slG~~l~~lltg-~~pf~~~~~~~~~~~~~~~~ 234 (332)
|=.+-... .+.....+..|...|.+||...- +..-+..+|.|.||+++++++.| ++||.+-.... ..
T Consensus 160 dsDsfqi~-~ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~-------~a 231 (637)
T COG4248 160 DSDSFQIN-ANGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLIS-------DA 231 (637)
T ss_pred cccceeec-cCCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccC-------CC
Confidence 86544333 44555667788899999998652 13346689999999999999886 99997632110 00
Q ss_pred CCCCCCcccCCCCCccccccccCCchhh--hhhhCCCCccCCCCCCCchHHHHHHHhcCCC--CCCCCCHHH
Q 035861 235 GTPTETIWPGLSELPGAKANFAKQPYNL--LRKRFPAASFTGSPVLSESGFDLLNRLLTYD--PEKRITVDD 302 (332)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~li~~~l~~d--p~~Rps~~e 302 (332)
+.+.+..+ ......+.. .....+....-+...+++.+..|+.+|+..- +.-||+++.
T Consensus 232 p~p~E~~I-----------a~g~f~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~a 292 (637)
T COG4248 232 PNPLETDI-----------AHGRFAYASDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKA 292 (637)
T ss_pred CCcchhhh-----------hcceeeechhccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHH
Confidence 00000000 000000111 1111222233334557889999999999763 568998764
No 449
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=99.19 E-value=1.9e-10 Score=91.35 Aligned_cols=134 Identities=25% Similarity=0.282 Sum_probs=82.3
Q ss_pred EEEEEEECCCCcEEEEEEeecccCCcccc------------------cccCCCcchhHHHHHHhhCCCCC--eeeeeeeE
Q 035861 26 IVYRARDKKSGEIVALKKVKMNVGRKEDC------------------LEYGFPISSLREINILLSFDHPS--IVNVKEVV 85 (332)
Q Consensus 26 ~v~~~~~~~~~~~v~iK~~~~~~~~~~~~------------------~~~~~~~~~~~e~~~l~~l~h~~--i~~~~~~~ 85 (332)
.||.|... ++..+|||+.+.....-... ..........+|.+.|.++...+ +...+.+
T Consensus 1 ~Vy~~~~~-~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~- 78 (188)
T PF01163_consen 1 DVYHAIDP-DGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDY- 78 (188)
T ss_dssp EEEEEEEC-TTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEE-
T ss_pred CEEEEECC-CCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEE-
Confidence 48888874 57799999997643211110 00001123457999999997664 3444433
Q ss_pred EcCCCeEEEEccccc--ccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHH-HHHCCcccccCCCCCEEEcCCCcEEEeecc
Q 035861 86 MDDHDSVYMVMEYME--HDLKWLMESMKQPFSTSEVKCLMLQLLEGVKY-LHDNWVLHRDLKTSNLLLNNQGVLKICDFG 162 (332)
Q Consensus 86 ~~~~~~~~lv~e~~~--~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~-lh~~~i~H~di~p~Nili~~~~~~~l~df~ 162 (332)
.. .+|||||++ |..+..+... .++......++.+++..+.. +|+.|++|||+++.||+++.+ .+.++|||
T Consensus 79 -~~---~~ivME~I~~~G~~~~~l~~~--~~~~~~~~~~~~~il~~~~~~~~~~givHGDLs~~NIlv~~~-~~~iIDf~ 151 (188)
T PF01163_consen 79 -NR---NVIVMEYIGEDGVPLPRLKDV--DLSPEEPKELLEEILEEIIKMLHKAGIVHGDLSEYNILVDDG-KVYIIDFG 151 (188)
T ss_dssp -ET---TEEEEE--EETTEEGGCHHHC--GGGGSTHHHHHHHHHHHHHHHHHCTTEEESS-STTSEEEETT-CEEE--GT
T ss_pred -eC---CEEEEEecCCCccchhhHHhc--cccchhHHHHHHHHHHHHHHHHHhcCceecCCChhhEEeecc-eEEEEecC
Confidence 22 269999999 7543333331 22255667788888885555 679999999999999999987 99999999
Q ss_pred cccccC
Q 035861 163 MSRQYG 168 (332)
Q Consensus 163 ~~~~~~ 168 (332)
.+....
T Consensus 152 qav~~~ 157 (188)
T PF01163_consen 152 QAVDSS 157 (188)
T ss_dssp TEEETT
T ss_pred cceecC
Confidence 887653
No 450
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.18 E-value=1.7e-10 Score=95.47 Aligned_cols=142 Identities=18% Similarity=0.247 Sum_probs=100.0
Q ss_pred cccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCC--eeeeeeeEEcCC--Ce
Q 035861 16 LNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPS--IVNVKEVVMDDH--DS 91 (332)
Q Consensus 16 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~--i~~~~~~~~~~~--~~ 91 (332)
.+.|+.|..+.||++.... |+.+++|......... ....+..|+..+..+.+.+ +..++....... +.
T Consensus 3 ~~~l~~G~~n~~~~v~~~~-g~~~ilK~~~~~~~~~-------~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~ 74 (223)
T cd05154 3 VRQLSGGQSNLTYLLTAGG-GRRLVLRRPPPGALLP-------SAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGT 74 (223)
T ss_pred ceecCCCccceEEEEEecC-CcceEEEeCCCcccCc-------ccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCC
Confidence 3568999999999998753 5789999986543210 1124568999999886533 455555542221 25
Q ss_pred EEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH------------------------------------
Q 035861 92 VYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHD------------------------------------ 135 (332)
Q Consensus 92 ~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~------------------------------------ 135 (332)
.++|||+++|..+..... ...+++.....++.+++.+|+.||+
T Consensus 75 ~~~v~e~i~G~~l~~~~~-~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (223)
T cd05154 75 PFYVMERVDGRVLRDRLL-RPELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDE 153 (223)
T ss_pred ceEEEEEeCCEecCCCCC-CCCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccc
Confidence 689999999865333221 1356777777777777777777773
Q ss_pred --------------------CCcccccCCCCCEEEcC--CCcEEEeecccccc
Q 035861 136 --------------------NWVLHRDLKTSNLLLNN--QGVLKICDFGMSRQ 166 (332)
Q Consensus 136 --------------------~~i~H~di~p~Nili~~--~~~~~l~df~~~~~ 166 (332)
..++|||+++.||+++. ++.+.|+||+.+..
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 154 PPAMERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred cHHHHHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 23689999999999998 56789999998764
No 451
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=99.16 E-value=6.6e-10 Score=93.62 Aligned_cols=146 Identities=14% Similarity=0.043 Sum_probs=93.2
Q ss_pred ccccCcEEEEEEEECCCCcEEEEEEeecccCC---cccccccCCCcchhHHHHHHhhCCCCCee--eeeeeEEcC----C
Q 035861 19 ISEGTYGIVYRARDKKSGEIVALKKVKMNVGR---KEDCLEYGFPISSLREINILLSFDHPSIV--NVKEVVMDD----H 89 (332)
Q Consensus 19 lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~---~~~~~~~~~~~~~~~e~~~l~~l~h~~i~--~~~~~~~~~----~ 89 (332)
+.......|+++... |+.|.||........ +.......-.....+|...+.+|...+|. ...++.... .
T Consensus 30 v~~~~~rrvvr~~~~--g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~ 107 (268)
T PRK15123 30 FRELEGRRTLRFELA--GKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPAT 107 (268)
T ss_pred EecCCCceEEEEEEC--CEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCcc
Confidence 333333446666554 778999977433211 00000000111355787777777433332 222222111 2
Q ss_pred CeEEEEccccccc--HHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcC-------CCcEEEe
Q 035861 90 DSVYMVMEYMEHD--LKWLMESM-KQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNN-------QGVLKIC 159 (332)
Q Consensus 90 ~~~~lv~e~~~~~--l~~~~~~~-~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~-------~~~~~l~ 159 (332)
...++|+|+++|. +.+.+... ..+.+......++.+++..++.||..|++|+|+++.|||++. ++.+.|+
T Consensus 108 ~~s~LVte~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LI 187 (268)
T PRK15123 108 RTSFIITEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAAGINHRDCYICHFLLHLPFPGREEDLKLSVI 187 (268)
T ss_pred ceeEEEEeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCcCccCCCChhhEEEeccccCCCCCceEEEE
Confidence 3578999999984 44444321 345677788899999999999999999999999999999985 4689999
Q ss_pred ecccccc
Q 035861 160 DFGMSRQ 166 (332)
Q Consensus 160 df~~~~~ 166 (332)
||+.+..
T Consensus 188 Dl~r~~~ 194 (268)
T PRK15123 188 DLHRAQI 194 (268)
T ss_pred ECCcccc
Confidence 9998854
No 452
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=99.16 E-value=1.9e-10 Score=94.08 Aligned_cols=145 Identities=21% Similarity=0.214 Sum_probs=101.7
Q ss_pred ccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccc--------cc------cCCCcchhHHHHHHhhCCCC--
Q 035861 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDC--------LE------YGFPISSLREINILLSFDHP-- 76 (332)
Q Consensus 13 y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~--------~~------~~~~~~~~~e~~~l~~l~h~-- 76 (332)
+.+...||-|--|.||.|... .|.++|||.-+....+-... .. .-......+|.+.|.+|...
T Consensus 93 e~iG~~IGvGKEsdVY~~~~~-~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~ 171 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAIDP-KGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGV 171 (304)
T ss_pred HhhccccccCccceEEEEECC-CCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCC
Confidence 346788999999999999986 68899999876432211100 00 00112345788888888543
Q ss_pred CeeeeeeeEEcCCCeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcE
Q 035861 77 SIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVL 156 (332)
Q Consensus 77 ~i~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~ 156 (332)
.+..-++ .+...+|||+++|..+.. -+++.+....++..|+.-+..+-..|++|||+++-||+++++|.+
T Consensus 172 ~VP~P~~-----~nRHaVvMe~ieG~eL~~-----~r~~~en~~~il~~il~~~~~~~~~GiVHGDlSefNIlV~~dg~~ 241 (304)
T COG0478 172 KVPKPIA-----WNRHAVVMEYIEGVELYR-----LRLDVENPDEILDKILEEVRKAYRRGIVHGDLSEFNILVTEDGDI 241 (304)
T ss_pred CCCCccc-----cccceeeeehcccceeec-----ccCcccCHHHHHHHHHHHHHHHHHcCccccCCchheEEEecCCCE
Confidence 3333322 245679999999954222 122456666777788887888889999999999999999999999
Q ss_pred EEeecccccccC
Q 035861 157 KICDFGMSRQYG 168 (332)
Q Consensus 157 ~l~df~~~~~~~ 168 (332)
.++||.-+...+
T Consensus 242 ~vIDwPQ~v~~~ 253 (304)
T COG0478 242 VVIDWPQAVPIS 253 (304)
T ss_pred EEEeCcccccCC
Confidence 999999876543
No 453
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=99.05 E-value=4.5e-09 Score=85.69 Aligned_cols=106 Identities=19% Similarity=0.167 Sum_probs=77.0
Q ss_pred chhHHHHHHhhCCCCCe--eeeeeeEEc---CCCeEEEEccccccc-HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH
Q 035861 62 SSLREINILLSFDHPSI--VNVKEVVMD---DHDSVYMVMEYMEHD-LKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHD 135 (332)
Q Consensus 62 ~~~~e~~~l~~l~h~~i--~~~~~~~~~---~~~~~~lv~e~~~~~-l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~ 135 (332)
...+|...+..|...+| ...+++... .....++|+|+++|. .+..+.......+......++.+++..++-||+
T Consensus 57 ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~~~~~~~~~ll~~l~~~i~~lH~ 136 (206)
T PF06293_consen 57 RAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQLDPSQRRELLRALARLIAKLHD 136 (206)
T ss_pred HHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcccchhhHHHHHHHHHHHHHHHHH
Confidence 45577777666643222 233333322 113468999999983 344444333347888889999999999999999
Q ss_pred CCcccccCCCCCEEEcCCC---cEEEeeccccccc
Q 035861 136 NWVLHRDLKTSNLLLNNQG---VLKICDFGMSRQY 167 (332)
Q Consensus 136 ~~i~H~di~p~Nili~~~~---~~~l~df~~~~~~ 167 (332)
.|++|+|+++.|||++.++ .+.++||+.+...
T Consensus 137 ~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~ 171 (206)
T PF06293_consen 137 AGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFR 171 (206)
T ss_pred CcCCCCCCCcccEEEeCCCCceeEEEEcchhceeC
Confidence 9999999999999999987 8999999987653
No 454
>PRK09902 hypothetical protein; Provisional
Probab=99.03 E-value=5.8e-09 Score=83.47 Aligned_cols=143 Identities=12% Similarity=0.118 Sum_probs=98.6
Q ss_pred cccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCe--eeee-eeEEc--CCCeEEE
Q 035861 20 SEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSI--VNVK-EVVMD--DHDSVYM 94 (332)
Q Consensus 20 g~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i--~~~~-~~~~~--~~~~~~l 94 (332)
|+||-|.|++.... |..+-+|.-.......-.. ..-...+.+|...+.++...++ .... +-... ..-..+|
T Consensus 27 ~rgG~SgV~r~~~~--g~~~ylKrq~nhl~~s~r~--P~g~ptf~rE~~~L~~L~~~GvPVP~pvf~~~~k~~~~~rA~L 102 (216)
T PRK09902 27 RRNGMSGVQCVERN--GKKLYVKRMTHHLFHSVRY--PFGRPTIVREVAVIKELERAGVIVPKIVFGEAVKIEGEWRALL 102 (216)
T ss_pred CCCCcceEEEEEeC--CcEEEEEeccCcccccccC--CCCchHHHHHHHHHHHHHHcCCCCCccceeeeeccCCceEEEE
Confidence 56899999998765 4467788764222111110 1133467899999988853332 2222 11111 1234689
Q ss_pred Ecccccc--cHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCc--EEEeecccccc
Q 035861 95 VMEYMEH--DLKWLMESM-KQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGV--LKICDFGMSRQ 166 (332)
Q Consensus 95 v~e~~~~--~l~~~~~~~-~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~--~~l~df~~~~~ 166 (332)
|+|-++| ++.+.+... -.+.++.....+..+++.+++-||+.|+.|+|+.+.||+++.+|. +.++||.-++.
T Consensus 103 VTe~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r~ 179 (216)
T PRK09902 103 VTEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSVNRQHGCCYVRHIYVKTEGKAEAGFLDLEKSRR 179 (216)
T ss_pred EEEeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHCCCcCCCCCHhheeecCCCCeeEEEEEhhccch
Confidence 9999986 555544332 235678888999999999999999999999999999999987777 99999987654
No 455
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=98.84 E-value=2.1e-08 Score=80.53 Aligned_cols=145 Identities=20% Similarity=0.161 Sum_probs=86.9
Q ss_pred hcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCC-cchhHHHHHHhhC---CCCCeeeeeeeEE
Q 035861 11 FEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFP-ISSLREINILLSF---DHPSIVNVKEVVM 86 (332)
Q Consensus 11 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~-~~~~~e~~~l~~l---~h~~i~~~~~~~~ 86 (332)
++|.+++.+-......|.+..-. |+.+++|..+......+.....-+. ....+.+..+.++ .......++.+..
T Consensus 31 ~~~~~~kv~k~~~r~~ValIei~--~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl~~e 108 (229)
T PF06176_consen 31 NNYKIIKVFKNTKRNYVALIEID--GKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYLAAE 108 (229)
T ss_pred CCceEEEeecCCCccEEEEEEEC--CcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCccccccceeeee
Confidence 46777777777777777766554 7889999887654332221110000 0112233323223 2333333222221
Q ss_pred ----cCCCeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecc
Q 035861 87 ----DDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFG 162 (332)
Q Consensus 87 ----~~~~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~ 162 (332)
.-....+++|||++|.-+.... .+++ .+...+.+++.-||+.|++|||.+|.|++++.+ .++++|++
T Consensus 109 kk~~~~~~~~~ll~EYIeG~~l~d~~----~i~e----~~~~ki~~~ikqlH~~G~~HGD~hpgNFlv~~~-~i~iID~~ 179 (229)
T PF06176_consen 109 KKIFRYTSSYVLLMEYIEGVELNDIE----DIDE----DLAEKIVEAIKQLHKHGFYHGDPHPGNFLVSNN-GIRIIDTQ 179 (229)
T ss_pred eeeccceeEEEEEEEEecCeecccch----hcCH----HHHHHHHHHHHHHHHcCCccCCCCcCcEEEECC-cEEEEECc
Confidence 1123466899999995432221 1233 245667788999999999999999999999965 59999998
Q ss_pred cccc
Q 035861 163 MSRQ 166 (332)
Q Consensus 163 ~~~~ 166 (332)
....
T Consensus 180 ~k~~ 183 (229)
T PF06176_consen 180 GKRM 183 (229)
T ss_pred cccc
Confidence 6543
No 456
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=98.80 E-value=2e-08 Score=81.55 Aligned_cols=145 Identities=20% Similarity=0.163 Sum_probs=93.3
Q ss_pred ccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccc----------c------ccCCCcchhHHHHHHhhCCCCC--e
Q 035861 17 NKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDC----------L------EYGFPISSLREINILLSFDHPS--I 78 (332)
Q Consensus 17 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~----------~------~~~~~~~~~~e~~~l~~l~h~~--i 78 (332)
..|++|-.+.||+|.. .++..+|+|++......-... . ...+......|...|+++...+ +
T Consensus 54 g~istGKEA~Vy~a~~-~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R~~eAGVrv 132 (268)
T COG1718 54 GCISTGKEANVYLAET-GDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKRAYEAGVRV 132 (268)
T ss_pred eeecCCcceEEEeecc-CCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 3678888889999876 457889999997644322110 0 0001111235666666653332 2
Q ss_pred eeeeeeEEcCCCeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH-CCcccccCCCCCEEEcCCCcEE
Q 035861 79 VNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHD-NWVLHRDLKTSNLLLNNQGVLK 157 (332)
Q Consensus 79 ~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~-~~i~H~di~p~Nili~~~~~~~ 157 (332)
..-+.+. .-.+|||+++....-.=.-.+-++...++..+..++++.+.-|-. .|++||||+..|||+. ++.+.
T Consensus 133 P~Pi~~~-----~nVLvMEfIg~~g~pAP~LkDv~~e~~e~~~~~~~~v~~~~~l~~~a~LVHgDLSEyNiL~~-~~~p~ 206 (268)
T COG1718 133 PEPIAFR-----NNVLVMEFIGDDGLPAPRLKDVPLELEEAEGLYEDVVEYMRRLYKEAGLVHGDLSEYNILVH-DGEPY 206 (268)
T ss_pred CCceeec-----CCeEEEEeccCCCCCCCCcccCCcCchhHHHHHHHHHHHHHHHHHhcCcccccchhhheEEE-CCeEE
Confidence 2222222 236999999864100000012234444788888999999999887 8999999999999999 78999
Q ss_pred EeecccccccC
Q 035861 158 ICDFGMSRQYG 168 (332)
Q Consensus 158 l~df~~~~~~~ 168 (332)
++||+.+...+
T Consensus 207 iID~~QaV~~~ 217 (268)
T COG1718 207 IIDVSQAVTID 217 (268)
T ss_pred EEECccccccC
Confidence 99999887654
No 457
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.67 E-value=8e-08 Score=87.85 Aligned_cols=149 Identities=19% Similarity=0.230 Sum_probs=94.1
Q ss_pred ccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccc--------------------------------cccCCCcchh
Q 035861 17 NKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDC--------------------------------LEYGFPISSL 64 (332)
Q Consensus 17 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~--------------------------------~~~~~~~~~~ 64 (332)
..|+.++-|+||+|+... |+.||||+.+......-.. .....+.++.
T Consensus 131 ~PiAsASIaQVH~A~L~s-G~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~ 209 (517)
T COG0661 131 EPIASASIAQVHRAVLKS-GEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYR 209 (517)
T ss_pred CchhhhhHhhheeEEecC-CCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHH
Confidence 578999999999999975 9999999986532211000 0000112234
Q ss_pred HHHHHHhhCC----CCCeeeeeeeEEcCCCeEEEEcccccccHHHHHH-hcCCCCCHHHHHHHHHHHHHHHHHHHHCCcc
Q 035861 65 REINILLSFD----HPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLME-SMKQPFSTSEVKCLMLQLLEGVKYLHDNWVL 139 (332)
Q Consensus 65 ~e~~~l~~l~----h~~i~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~-~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~ 139 (332)
.|+..+.+++ ...-+.+-.++.+-.....++|||++|.-.+.+. .....++...+.....++. +..+-..|++
T Consensus 210 ~EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~~g~d~k~ia~~~~~~f--~~q~~~dgff 287 (517)
T COG0661 210 REAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKSAGIDRKELAELLVRAF--LRQLLRDGFF 287 (517)
T ss_pred HHHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCcc
Confidence 5555554442 2333444455544334568999999994333332 2224456444444333322 3344568999
Q ss_pred cccCCCCCEEEcCCCcEEEeecccccccC
Q 035861 140 HRDLKTSNLLLNNQGVLKICDFGMSRQYG 168 (332)
Q Consensus 140 H~di~p~Nili~~~~~~~l~df~~~~~~~ 168 (332)
|+|.+|.||+++.+|++.+.|||.....+
T Consensus 288 HaDpHpGNi~v~~~g~i~~lDfGi~g~l~ 316 (517)
T COG0661 288 HADPHPGNILVRSDGRIVLLDFGIVGRLD 316 (517)
T ss_pred ccCCCccceEEecCCcEEEEcCcceecCC
Confidence 99999999999999999999999987654
No 458
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=98.66 E-value=2.3e-07 Score=76.66 Aligned_cols=134 Identities=16% Similarity=0.161 Sum_probs=78.1
Q ss_pred ccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCe--eeeeeeEEcCCCeEEE
Q 035861 17 NKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSI--VNVKEVVMDDHDSVYM 94 (332)
Q Consensus 17 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i--~~~~~~~~~~~~~~~l 94 (332)
..||+|..+.||+. .+..+++|........ ..+.+|.+.++.+..-++ ...+.+. +.....++
T Consensus 7 ~~i~~G~t~~~y~~----~~~~~VlR~~~~~~~~----------~~i~~E~~~l~~l~~~glpvP~~~~~~-~~~~~~gl 71 (226)
T TIGR02172 7 TQTGEGGNGESYTH----KTGKWMLKLYNPGFDK----------ETIKREFDASRKVFSLGIPTPHPFDLV-EDGGRLGL 71 (226)
T ss_pred eeecCCCCcceeEe----cCCCEEEEeCCCCCCH----------HHHHHHHHHHHHHHHcCCCCCceEEEE-ecCCeeee
Confidence 56899999999984 2456888988643211 134688888888754333 4445544 44466789
Q ss_pred EcccccccH-HH---------------HHHh----cC----CCCCHHHH-HHHHH----------HHHHH-HHHHH----
Q 035861 95 VMEYMEHDL-KW---------------LMES----MK----QPFSTSEV-KCLML----------QLLEG-VKYLH---- 134 (332)
Q Consensus 95 v~e~~~~~l-~~---------------~~~~----~~----~~l~~~~~-~~i~~----------~l~~~-L~~lh---- 134 (332)
|||+++|.. .. .+.. -+ ...+.... ..+.. .+... ..+|.
T Consensus 72 v~e~i~G~~~~~~~~~~~~~~~~~l~~~la~~l~~lH~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~ 151 (226)
T TIGR02172 72 IYELIVGKRSFSRIISDNPSRLEEIAKIFAEMAKKLHSTKCDTSTFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKEVPD 151 (226)
T ss_pred eeeecCCccchhhhhcCCHHHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhCCC
Confidence 999999841 11 0000 00 01111110 01100 01111 11222
Q ss_pred HCCcccccCCCCCEEEcCCCcEEEeecccccc
Q 035861 135 DNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQ 166 (332)
Q Consensus 135 ~~~i~H~di~p~Nili~~~~~~~l~df~~~~~ 166 (332)
...++|||+.|.||++++++ +.++||+.+..
T Consensus 152 ~~~~~HgD~~~~Nii~~~~~-~~iIDwe~a~~ 182 (226)
T TIGR02172 152 TSTCLHGDFQIGNLITSGKG-TYWIDLGDFGY 182 (226)
T ss_pred CCceEecCCCCCcEEEcCCC-cEEEechhcCc
Confidence 12368999999999999888 99999998754
No 459
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=98.59 E-value=8e-07 Score=68.48 Aligned_cols=132 Identities=23% Similarity=0.261 Sum_probs=93.8
Q ss_pred cccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCCe
Q 035861 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHDS 91 (332)
Q Consensus 12 ~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 91 (332)
..++.+.|+.|.+|.||++.+. |..+|+|+-+.++... .+..|++++..+.-.++.+-...+..+
T Consensus 23 ~~~v~~~L~KG~~s~Vyl~~~~--~~~~a~Kvrr~ds~r~----------~l~kEakiLeil~g~~~~p~vy~yg~~--- 87 (201)
T COG2112 23 ELRVEKELAKGTTSVVYLGEWR--GGEVALKVRRRDSPRR----------NLEKEAKILEILAGEGVTPEVYFYGED--- 87 (201)
T ss_pred hhhhhhhhhcccccEEEEeecc--CceEEEEEecCCcchh----------hHHHHHHHHHHhhhcCCCceEEEechh---
Confidence 4467788999999999999998 7789999887655433 456899999988877776655555233
Q ss_pred EEEEcccccc-cHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCC-CCCEEEcCCCcEEEeeccccccc
Q 035861 92 VYMVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLK-TSNLLLNNQGVLKICDFGMSRQY 167 (332)
Q Consensus 92 ~~lv~e~~~~-~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~-p~Nili~~~~~~~l~df~~~~~~ 167 (332)
.+.|||+.| .+.+..... +... ...++++---|-..||-|+.|+ |..+++.+++.+.|+||..|+.-
T Consensus 88 -~i~me~i~G~~L~~~~~~~----~rk~----l~~vlE~a~~LD~~GI~H~El~~~~k~vlv~~~~~~iIDFd~At~k 156 (201)
T COG2112 88 -FIRMEYIDGRPLGKLEIGG----DRKH----LLRVLEKAYKLDRLGIEHGELSRPWKNVLVNDRDVYIIDFDSATFK 156 (201)
T ss_pred -hhhhhhhcCcchhhhhhcc----cHHH----HHHHHHHHHHHHHhccchhhhcCCceeEEecCCcEEEEEccchhhc
Confidence 466999999 443332211 2233 3344455444778899999986 56666666679999999999843
No 460
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=98.49 E-value=4.1e-07 Score=75.75 Aligned_cols=139 Identities=21% Similarity=0.258 Sum_probs=75.5
Q ss_pred cccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCC--eeeeeeeEE--cCCCe
Q 035861 16 LNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPS--IVNVKEVVM--DDHDS 91 (332)
Q Consensus 16 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~--i~~~~~~~~--~~~~~ 91 (332)
++.++.|..+.||++.... ..+++|...... .. ..+..|..+++.+.... +..++.... .....
T Consensus 2 i~~l~~G~~n~~~~v~~~~--~~~vlK~~~~~~--~~--------~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~ 69 (239)
T PF01636_consen 2 IRPLSGGFSNRVYRVTTDD--GRYVLKFYRPPD--AA--------ERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGF 69 (239)
T ss_dssp EEEEEESSSSEEEEEEETT--SEEEEEEESSHH--HH--------HHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSE
T ss_pred CccCCCCCeeeEEEEEECC--cEEEEEEeCCCC--CH--------HHHHHHHHHHHHHHhcCCCCceEEeeccccccccc
Confidence 4678999999999999874 589999976541 00 13457777777774332 334444221 22245
Q ss_pred EEEEcccccccHHHH--------------------HHhcC---CCCCHHH---------HHHH------------HHHHH
Q 035861 92 VYMVMEYMEHDLKWL--------------------MESMK---QPFSTSE---------VKCL------------MLQLL 127 (332)
Q Consensus 92 ~~lv~e~~~~~l~~~--------------------~~~~~---~~l~~~~---------~~~i------------~~~l~ 127 (332)
.+++|++++|..... +.... ..+.... .... ...+.
T Consensus 70 ~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (239)
T PF01636_consen 70 PYLLMEYIPGRPLDDELSPEQRPELLRQLGRALAQLHQVPPPFSPFADWPEWRLEFLRQLESWTARLRASELFDDLEELE 149 (239)
T ss_dssp EEEEEEEESSEEHHHTSTHHHHHHHHHHHHHHHHHHHHSHTTCCCHTHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
T ss_pred ceEEEEEeccccccccccccccccccccchhhhhhcccccccccccccccccccccccccccccccccchhhhhhhHHHH
Confidence 789999998843222 01110 1111000 0000 11122
Q ss_pred H-HHHHHHH-------CCcccccCCCCCEEEc-CCCcEEEeecccccc
Q 035861 128 E-GVKYLHD-------NWVLHRDLKTSNLLLN-NQGVLKICDFGMSRQ 166 (332)
Q Consensus 128 ~-~L~~lh~-------~~i~H~di~p~Nili~-~~~~~~l~df~~~~~ 166 (332)
. .+..+++ ..++|||+.|.||+++ +++.+.|+||+.+..
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~~ 197 (239)
T PF01636_consen 150 ERLLQELEALLPKPLPPVLIHGDLHPGNILVDPSDGRIGIIDFEDAGW 197 (239)
T ss_dssp HHHHHHHHHHHHCCSCEEEE-SS-SGGGEEEESSTTEEEE--GTT-EE
T ss_pred HHHHHHHHhhhccCCCcEEEEeccccccceeeeccceeEEEecccceE
Confidence 2 3333332 3589999999999999 667778999987653
No 461
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=98.36 E-value=7.3e-08 Score=87.62 Aligned_cols=245 Identities=17% Similarity=0.127 Sum_probs=159.9
Q ss_pred cccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCC-eeeeeeeEEcCCC
Q 035861 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPS-IVNVKEVVMDDHD 90 (332)
Q Consensus 12 ~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~-i~~~~~~~~~~~~ 90 (332)
-|.....+++++++++++.+...+...+ .+.+... ....-++++|.+++||| .+..++.+ +.+.
T Consensus 243 ws~~fh~fvK~altknpKkRptaeklL~-h~fvs~~-------------l~~rl~~eLLdK~n~P~~~v~~~~d~-~~E~ 307 (829)
T KOG0576|consen 243 WSEFFHNFVKGALTKNPKKRPTAEKLLQ-HPFVSQT-------------LSRRLAIELLDKVNNPNPVVRYLEDY-DGED 307 (829)
T ss_pred chHHHHHHHHHHhcCCCccCCChhhhee-ceeeccc-------------hhhHHHHHHHHHccCCCCcccccccC-Cccc
Confidence 4667778899999999999887655544 5555432 13357899999999999 55555555 4557
Q ss_pred eEEEEccccccc--HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccC
Q 035861 91 SVYMVMEYMEHD--LKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYG 168 (332)
Q Consensus 91 ~~~lv~e~~~~~--l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~ 168 (332)
..++.++++.++ ....+....-.+...+...+.+.-+.+|+++|+.--+|+| ||+... +..+..+|+....++
T Consensus 308 ~~~i~~~i~s~~rs~~~~~~~se~~~~~~~~~~~~r~et~~l~~l~~~~~~~~d----~~l~s~-~~~~~~~~~v~~~L~ 382 (829)
T KOG0576|consen 308 YLWIPMRICSTGRSSALEMTVSEIALEQYQFAYPLRKETRPLAELHSSYKVHRD----NILGSE-EEVKLLDFAVPPQLT 382 (829)
T ss_pred ccchhhhhhcCCccccccCChhhHhhhhhhhhhhhhhhcccccccccccccCcc----cccccc-cccccccccCCcccC
Confidence 788999999875 2221111122344445556667777899999988778887 666655 788999999887764
Q ss_pred CCCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCC
Q 035861 169 SPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSEL 248 (332)
Q Consensus 169 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (332)
.. .......+++.++|||+... ..+....|.|++|.---++.-|.+|-.... ......+...
T Consensus 383 ~~-~~~~t~~~~~~~~~pev~~~-~~~~~~p~~~~~~~~~~~~ap~~pPr~~P~---------------~~~~~~g~~p- 444 (829)
T KOG0576|consen 383 RT-MKPRTAIGTPEPLAPEVIQE-NTIDGCPDSGSLAVSAIQMAPGLPPRSSPP---------------AVLPMIGNGP- 444 (829)
T ss_pred cc-cccccCCCCCCCCCchhhcc-cccccCCCccCCCcchhhcCCCCCCCCCCc---------------cccCCCCCCC-
Confidence 33 24566788999999998876 678888999999986666666666654411 0000000000
Q ss_pred ccccccccCCchhhhhhhCCCCccCCCCCCCchHH-HHHHHhcCCCCCCCCCHHHHhcCCCCCCCC
Q 035861 249 PGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGF-DLLNRLLTYDPEKRITVDDALNHYWFHEVP 313 (332)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~li~~~l~~dp~~Rps~~ell~hp~f~~~~ 313 (332)
+ ...+......++... ++...|+...|..|+....++-|.+|..-+
T Consensus 445 -~------------------s~~L~~~~aw~~~~~~~~~~~~~~g~P~~pkv~mgacfsKvfngCp 491 (829)
T KOG0576|consen 445 -N------------------SPMLTDKSAWSPVFHRDFPAPCLNGLPPTPKVHMGACFSKVFNGCP 491 (829)
T ss_pred -C------------------ccccchhhhcCcccccCCcccccCCCCCCCcchhhHHHHHHhccCc
Confidence 0 000000000011111 467788888999999999998888887644
No 462
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=98.36 E-value=2.1e-06 Score=78.42 Aligned_cols=146 Identities=21% Similarity=0.196 Sum_probs=91.8
Q ss_pred ccccccCcEEEEEEEECCCCcEEEEEEeecccCCcc-----------------------------cccccCCCcchhHHH
Q 035861 17 NKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKE-----------------------------DCLEYGFPISSLREI 67 (332)
Q Consensus 17 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~-----------------------------~~~~~~~~~~~~~e~ 67 (332)
+.||.-+.|+||+|+.+. |+.||||+-+......- .....-.+.++..|+
T Consensus 167 ~piaaASlaQVhrA~L~~-G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~EA 245 (538)
T KOG1235|consen 167 EPIAAASLAQVHRARLKN-GEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTKEA 245 (538)
T ss_pred chhhhcchhheEEEEecC-CCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHHHH
Confidence 579999999999999976 99999999755322110 000011122344555
Q ss_pred HHHhhC----CCCC---eeeeeeeEEcCCCeEEEEccccccc---HHHHHHhcCCCCCHHHHHHHHHHHHHHHHH-HHHC
Q 035861 68 NILLSF----DHPS---IVNVKEVVMDDHDSVYMVMEYMEHD---LKWLMESMKQPFSTSEVKCLMLQLLEGVKY-LHDN 136 (332)
Q Consensus 68 ~~l~~l----~h~~---i~~~~~~~~~~~~~~~lv~e~~~~~---l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~-lh~~ 136 (332)
+...++ .|-+ -+.+-.++.+-.....++|||++|. -++.+.+ ..++...+ +..+.++... +-..
T Consensus 246 ~Nae~~~~~f~~~~~~~~V~VP~Vy~~~st~RVLtME~~~G~~i~Dl~~i~~--~gi~~~~i---~~~l~~~~~~qIf~~ 320 (538)
T KOG1235|consen 246 KNAERFRENFKDFSLLTYVLVPKVYWDLSTKRVLTMEYVDGIKINDLDAIDK--RGISPHDI---LNKLVEAYLEQIFKT 320 (538)
T ss_pred HhHHHHHHHHHhcccccceeCCeehhhcCcceEEEEEecCCccCCCHHHHHH--cCCCHHHH---HHHHHHHHHHHHHhc
Confidence 444333 3444 2224444433334578999999983 2344443 34666544 3444443333 4468
Q ss_pred CcccccCCCCCEEEcC----CCcEEEeecccccccC
Q 035861 137 WVLHRDLKTSNLLLNN----QGVLKICDFGMSRQYG 168 (332)
Q Consensus 137 ~i~H~di~p~Nili~~----~~~~~l~df~~~~~~~ 168 (332)
|++|+|-+|.||+++. ++.+.+-|||+.....
T Consensus 321 GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is 356 (538)
T KOG1235|consen 321 GFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVIS 356 (538)
T ss_pred CCccCCCCCCcEEEecCCCCCccEEEEccccccccc
Confidence 8999999999999994 5689999999987654
No 463
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=98.34 E-value=4.2e-06 Score=81.39 Aligned_cols=202 Identities=20% Similarity=0.211 Sum_probs=134.0
Q ss_pred HHHHHHhhCCCCCeeeeeeeEEcCCCe---EEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccc
Q 035861 65 REINILLSFDHPSIVNVKEVVMDDHDS---VYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHR 141 (332)
Q Consensus 65 ~e~~~l~~l~h~~i~~~~~~~~~~~~~---~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~ 141 (332)
.|.+.+....|+|+..++.+..+.... ..+..+++.+..+......-+.++....+.+..++..+|+++|+....|.
T Consensus 231 ~e~~~l~k~~~~n~~~~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~q~v~~i~~~~~r~~~~~~~~GL~~~h~~~l~~v 310 (1351)
T KOG1035|consen 231 IELESLSKIAHDNLGGYFVYGLERLFRGIVLDVLQEICSKVELRSLLQSVGSIPLETLRILHQKLLEGLAYLHSLSLEHV 310 (1351)
T ss_pred HHHHHHHhhccccccceeEEeehhhcchHHHHHHHhhcCccchHHHHhhccccCHHHHHHHHHHHhhhHHHHHHhcccee
Confidence 466777778999999999888665221 12334556554333344446778999999999999999999999866665
Q ss_pred cCCCC---CEEEcCCCcEEEe--ecccccccCCCCCCCccccccccccchhhhcCC-CCCCchhHHHHHHHHHHHHHhCC
Q 035861 142 DLKTS---NLLLNNQGVLKIC--DFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGA-KKYSTAVDMWSVGCIMAELLAKK 215 (332)
Q Consensus 142 di~p~---Nili~~~~~~~l~--df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~sDi~slG~~l~~lltg~ 215 (332)
-+... +.-++..+.+..+ ||+.+........ ......+..+.++|..... .......|+|++|.+...+..|.
T Consensus 311 ~L~~s~~~~~~~~~e~~~~~sl~~~~ss~~l~d~~~-~~~~~~~~~~~~~e~~~~~~~~~~r~~dL~~lgll~~~~~~~~ 389 (1351)
T KOG1035|consen 311 VLSASSSKESTVDGEGVVAISLSDFDSSKPLPDNEK-SFSDLLAEIRNADEDLKENTAKKSRLTDLWCLGLLLLQLSQGE 389 (1351)
T ss_pred EEecccccccccCccceeecchhhhcccccCCCccc-chhhcCccccccccccccccchhhhhhHHHHHHHHHhhhhhcC
Confidence 55554 4445566667766 8887776543322 2223344557777766541 12233479999999999998877
Q ss_pred CCCCCCChHHHHHHHHHHcCCCCCCcccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCC
Q 035861 216 PLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPE 295 (332)
Q Consensus 216 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~ 295 (332)
.+-........ .... . ...+..+++.+|+.-+++
T Consensus 390 ~i~~~~~~~~~---~l~~------------------------------------------~-~~~~~~d~~~~~~~~~~~ 423 (1351)
T KOG1035|consen 390 DISEKSAVPVS---LLDV------------------------------------------L-STSELLDALPKCLDEDSE 423 (1351)
T ss_pred cccccccchhh---hhcc------------------------------------------c-cchhhhhhhhhhcchhhh
Confidence 65433211110 0000 0 111567899999999999
Q ss_pred CCCCHHHHhcCCCCCCCC
Q 035861 296 KRITVDDALNHYWFHEVP 313 (332)
Q Consensus 296 ~Rps~~ell~hp~f~~~~ 313 (332)
+|+++.+++.|+|.+--.
T Consensus 424 ~Rl~~~~ll~~~f~~~~~ 441 (1351)
T KOG1035|consen 424 ERLSALELLTHPFLRFPT 441 (1351)
T ss_pred hccchhhhhhchhccccc
Confidence 999999999999987543
No 464
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=98.32 E-value=6.5e-06 Score=69.09 Aligned_cols=72 Identities=18% Similarity=0.176 Sum_probs=45.5
Q ss_pred cccccCc-EEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCC-CCCeeeeeeeEEcCCCeEEEE
Q 035861 18 KISEGTY-GIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFD-HPSIVNVKEVVMDDHDSVYMV 95 (332)
Q Consensus 18 ~lg~g~~-g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~~lv 95 (332)
.|..|.. +.||++... +..+++|+..... . .....|+..++.+. +--+..++... ...+..++|
T Consensus 5 ~~~~g~~~~~v~~~~~~--~~~~~vk~~~~~~--~---------~~~~~E~~~l~~l~~~~~vP~v~~~~-~~~~~~~lv 70 (244)
T cd05150 5 RVTEGQSGATVYRLDGK--NPGLYLKIAPSGP--T---------YELEREAERLRWLAGKLPVPEVIDYG-SDDGRAWLL 70 (244)
T ss_pred ecCCCCCcCeEEEEcCC--CCcEEEEecCCCc--c---------cchHHHHHHHHHHHhcCCCCeEEEEE-ecCCccEEE
Confidence 3445555 789999764 4678888875432 0 13457888887773 33344555544 333567899
Q ss_pred cccccccH
Q 035861 96 MEYMEHDL 103 (332)
Q Consensus 96 ~e~~~~~l 103 (332)
|++++|..
T Consensus 71 ~e~i~G~~ 78 (244)
T cd05150 71 TSAVPGVP 78 (244)
T ss_pred EEeeCCcc
Confidence 99999854
No 465
>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2
Probab=98.22 E-value=2.5e-05 Score=62.26 Aligned_cols=134 Identities=22% Similarity=0.248 Sum_probs=89.9
Q ss_pred hcccccccccccCc-EEEEEEEECCCCcEEEEEEeecccCCccc-----ccc--------cCCCcchhHHHHHHhhCC--
Q 035861 11 FEFEKLNKISEGTY-GIVYRARDKKSGEIVALKKVKMNVGRKED-----CLE--------YGFPISSLREINILLSFD-- 74 (332)
Q Consensus 11 ~~y~~~~~lg~g~~-g~v~~~~~~~~~~~v~iK~~~~~~~~~~~-----~~~--------~~~~~~~~~e~~~l~~l~-- 74 (332)
.+++.++.||.|.- |.||++... |..||+|++..-...... ... ......+..|.+...+|+
T Consensus 37 ~~I~flefLg~g~~~~~V~kv~I~--g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke~ 114 (207)
T PF13095_consen 37 DDIEFLEFLGHGSHDGYVFKVEID--GRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKEA 114 (207)
T ss_pred CcEeeeeecCCCCceeEEEEEEEC--CeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHhc
Confidence 58999999999999 999999987 789999994321111110 000 012235667777777774
Q ss_pred -CCCe--eeeeeeEEcC-----------------CCeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH
Q 035861 75 -HPSI--VNVKEVVMDD-----------------HDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLH 134 (332)
Q Consensus 75 -h~~i--~~~~~~~~~~-----------------~~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh 134 (332)
+.++ ++++|+..-+ ...+.||.|++.... .+... -+.+|.+-+..+|
T Consensus 115 ~~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~---------~~~~~----~~~~~~~dl~~~~ 181 (207)
T PF13095_consen 115 GREGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP---------PLQIR----DIPQMLRDLKILH 181 (207)
T ss_pred cccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc---------ccchh----HHHHHHHHHHHHH
Confidence 4455 8888887322 112456777665532 23333 3456666677899
Q ss_pred HCCcccccCCCCCEEEcCCCcEEEeecccc
Q 035861 135 DNWVLHRDLKTSNLLLNNQGVLKICDFGMS 164 (332)
Q Consensus 135 ~~~i~H~di~p~Nili~~~~~~~l~df~~~ 164 (332)
+.||+-+|+++.|.. .=+|+|||.+
T Consensus 182 k~gI~~~Dv~~~ny~-----~G~lvDfs~~ 206 (207)
T PF13095_consen 182 KLGIVPRDVKPRNYR-----GGKLVDFSSS 206 (207)
T ss_pred HCCeeeccCcccccc-----CCEEEecccC
Confidence 999999999999998 3368899865
No 466
>TIGR02721 ycfN_thiK thiamine kinase. Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.
Probab=98.11 E-value=1.4e-05 Score=67.53 Aligned_cols=135 Identities=21% Similarity=0.288 Sum_probs=74.7
Q ss_pred cccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCCeEEEEcc
Q 035861 18 KISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHDSVYMVME 97 (332)
Q Consensus 18 ~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~lv~e 97 (332)
.+..|-.+.+|+... ++..+++|........... ....|..+++.+...++.+-.-.. .. -++|+|
T Consensus 3 ~~~~G~tn~~y~~~~--~~~~~vlR~~~~~~~~~~~--------~r~~E~~~l~~l~~~g~~P~~i~~-~~---~~~v~e 68 (256)
T TIGR02721 3 TLSGGLTNRSWRIEH--PGISFVWRPQSPVCKALGV--------DRQREYQILQALSALGLAPKPILV-NE---HWLLVE 68 (256)
T ss_pred cCCCcCcCCeEEEEe--CCccEEEeeCCcccccccC--------cHHHHHHHHHHHHhcCCCCceEEE-eC---CEEEEE
Confidence 456788889998874 3668889876432211100 124788888888544443322222 12 268999
Q ss_pred cccccHHHH-----------H----H---hcC---CCCCHH-HHHHHHHHH---------HHHHHHHHH--------CCc
Q 035861 98 YMEHDLKWL-----------M----E---SMK---QPFSTS-EVKCLMLQL---------LEGVKYLHD--------NWV 138 (332)
Q Consensus 98 ~~~~~l~~~-----------~----~---~~~---~~l~~~-~~~~i~~~l---------~~~L~~lh~--------~~i 138 (332)
|++|..... + . ... .+++.. .+..+..++ ...+..+-. ..+
T Consensus 69 ~i~G~~~~~~~~~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 148 (256)
T TIGR02721 69 WLEGEVITLDQFVALDLLLELAALLHQLHSQPRFGYPLSLKARIAHYWLQIDPARRTPEWLRLYKQFRSAPEPAPLPLAP 148 (256)
T ss_pred eccCcccccccccCchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhcccccCChHHHHHHHHHHhccCCCCCCCee
Confidence 998843210 1 0 001 112211 111211111 112222222 248
Q ss_pred ccccCCCCCEEEcCCCcEEEeeccccccc
Q 035861 139 LHRDLKTSNLLLNNQGVLKICDFGMSRQY 167 (332)
Q Consensus 139 ~H~di~p~Nili~~~~~~~l~df~~~~~~ 167 (332)
+|+|+.|.||++++++ +.|+||..+...
T Consensus 149 ~H~Dl~~~Nil~~~~~-~~lIDwE~a~~g 176 (256)
T TIGR02721 149 LHMDVHAYNLVVTPQG-LKLIDWEYASDG 176 (256)
T ss_pred ecCCCCcCcEEEeCCC-CEEEeccccCcC
Confidence 9999999999999877 789999988653
No 467
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=98.09 E-value=2.3e-05 Score=65.42 Aligned_cols=30 Identities=30% Similarity=0.437 Sum_probs=25.6
Q ss_pred CcccccCCCCCEEEcCCCcEEEeecccccc
Q 035861 137 WVLHRDLKTSNLLLNNQGVLKICDFGMSRQ 166 (332)
Q Consensus 137 ~i~H~di~p~Nili~~~~~~~l~df~~~~~ 166 (332)
+++|||+.+.||++++++..-|+||+.+..
T Consensus 165 ~l~HGD~~~~Nvlv~~~~i~giIDw~~a~~ 194 (235)
T cd05155 165 VWFHGDLAPGNLLVQDGRLSAVIDFGCLGV 194 (235)
T ss_pred eEEeCCCCCCcEEEECCCEEEEEeCcccCc
Confidence 489999999999999765567999998754
No 468
>PLN02876 acyl-CoA dehydrogenase
Probab=98.08 E-value=3.1e-05 Score=76.30 Aligned_cols=81 Identities=19% Similarity=0.276 Sum_probs=51.8
Q ss_pred ccccccccCcEEEEEEEECCCC--cEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCC-CCCe--eeeeeeEEcC-
Q 035861 15 KLNKISEGTYGIVYRARDKKSG--EIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFD-HPSI--VNVKEVVMDD- 88 (332)
Q Consensus 15 ~~~~lg~g~~g~v~~~~~~~~~--~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i--~~~~~~~~~~- 88 (332)
.++.++.|.++.+|+......+ ..+++|+......... ...+.+|..+++.+. |.++ ..++.++.+.
T Consensus 42 ~v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~~-------~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~ 114 (822)
T PLN02876 42 KVSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQS-------AHAVEREYQVLRALGEHTDVPVPKVYCLCTDAS 114 (822)
T ss_pred eEEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCcc-------HHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCC
Confidence 3567889999999998765322 4677877643321111 013568999998884 6654 5555555222
Q ss_pred -CCeEEEEccccccc
Q 035861 89 -HDSVYMVMEYMEHD 102 (332)
Q Consensus 89 -~~~~~lv~e~~~~~ 102 (332)
.+..|+|||+++|.
T Consensus 115 v~G~~flVME~v~G~ 129 (822)
T PLN02876 115 VIGTAFYIMEYLEGR 129 (822)
T ss_pred cCCCceEEEEecCCc
Confidence 14578999999884
No 469
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=98.07 E-value=4.8e-05 Score=63.44 Aligned_cols=73 Identities=10% Similarity=0.213 Sum_probs=44.7
Q ss_pred cccccccCcEEEEEEEECC-CCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeee-eeeeEEcCCCeEE
Q 035861 16 LNKISEGTYGIVYRARDKK-SGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVN-VKEVVMDDHDSVY 93 (332)
Q Consensus 16 ~~~lg~g~~g~v~~~~~~~-~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~-~~~~~~~~~~~~~ 93 (332)
++.|..|-.+.+|++.... .++.|++|+....... .. .-..|+.++..+...++.+ ++... ++ .
T Consensus 3 i~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~~~---~~------d~~~E~~~~~~l~~~gl~P~v~~~~-~~----~ 68 (235)
T cd05157 3 FKRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKTEL---II------DRERELRIHKLLSKHGLAPKLYATF-QN----G 68 (235)
T ss_pred EEEcCCcccceEEEEEcCCCCCCeEEEEEccCCccc---ee------cHHHHHHHHHHHHhCCCCCeEEEEe-CC----c
Confidence 4567888889999997543 3567999976532211 11 1236888888775444433 33322 22 3
Q ss_pred EEccccccc
Q 035861 94 MVMEYMEHD 102 (332)
Q Consensus 94 lv~e~~~~~ 102 (332)
+++||++|.
T Consensus 69 ~l~e~i~G~ 77 (235)
T cd05157 69 LIYEFIPGR 77 (235)
T ss_pred EEEEeeCCC
Confidence 799999873
No 470
>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].
Probab=98.05 E-value=9.4e-05 Score=59.46 Aligned_cols=140 Identities=17% Similarity=0.207 Sum_probs=90.5
Q ss_pred ccccccccCcEEEEEEEECCCCcEEEEEEeecccCCccc--------ccccCCCcchhHHHHHHhhCC------CCCeee
Q 035861 15 KLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKED--------CLEYGFPISSLREINILLSFD------HPSIVN 80 (332)
Q Consensus 15 ~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~--------~~~~~~~~~~~~e~~~l~~l~------h~~i~~ 80 (332)
-...||+|+.-.||.-- .+...+||+.......... ...........+|+.....+. +.+|..
T Consensus 5 ~~~~i~~G~~R~cy~HP---~dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r 81 (199)
T PF10707_consen 5 ESDLIAQGGERDCYQHP---DDPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPR 81 (199)
T ss_pred CCcccccCCCceEEECC---CCCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCccccccc
Confidence 34579999999998653 3556899999876510000 000111224556776666665 788999
Q ss_pred eeeeEEcCCCeEEEEccccc---cc---HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCC
Q 035861 81 VKEVVMDDHDSVYMVMEYME---HD---LKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQG 154 (332)
Q Consensus 81 ~~~~~~~~~~~~~lv~e~~~---~~---l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~ 154 (332)
++|...++ .-..+|+|.+. |. ++..... .+.+++ ... ..+-+...+|-+++|+.+|++|.||++..+.
T Consensus 82 ~~G~veT~-~G~Glv~e~I~d~dG~~s~TL~~~l~-~~~~~~-~~~---~~L~~f~~~l~~~~Iv~~dl~~~NIv~~~~~ 155 (199)
T PF10707_consen 82 FYGFVETN-LGLGLVVELIRDADGNISPTLEDYLK-EGGLTE-ELR---QALDEFKRYLLDHHIVIRDLNPHNIVVQRRD 155 (199)
T ss_pred EeEEEecC-CceEEEEEEEECCCCCcCccHHHHHH-cCCccH-HHH---HHHHHHHHHHHHcCCeecCCCcccEEEEecC
Confidence 99999555 66788888875 21 2333333 445666 333 3444555678899999999999999997543
Q ss_pred ----cEEEee-ccc
Q 035861 155 ----VLKICD-FGM 163 (332)
Q Consensus 155 ----~~~l~d-f~~ 163 (332)
.+.|+| ||.
T Consensus 156 ~~~~~lvlIDG~G~ 169 (199)
T PF10707_consen 156 SGEFRLVLIDGLGE 169 (199)
T ss_pred CCceEEEEEeCCCC
Confidence 578887 443
No 471
>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C). Proteins in this uncharacterised family are described as transmembrane proteins.
Probab=97.94 E-value=0.0001 Score=58.90 Aligned_cols=97 Identities=20% Similarity=0.204 Sum_probs=75.9
Q ss_pred HHHHHHhhCCC-CCeeeeeeeEEcCCCeEEEEccccccc-HHHH---HHhcCCCCCHHHHHHHHHHHHHHHHHHHH---C
Q 035861 65 REINILLSFDH-PSIVNVKEVVMDDHDSVYMVMEYMEHD-LKWL---MESMKQPFSTSEVKCLMLQLLEGVKYLHD---N 136 (332)
Q Consensus 65 ~e~~~l~~l~h-~~i~~~~~~~~~~~~~~~lv~e~~~~~-l~~~---~~~~~~~l~~~~~~~i~~~l~~~L~~lh~---~ 136 (332)
.|.-+++.+++ +++++++|.| +. +++.|+.+.+ +... +.. -...++..+.+|+.++++.+.+|+. .
T Consensus 8 ~E~lll~~l~~~~~~pk~lG~C----G~-~~v~E~~~~~~~~~~~~~l~~-~~~~~w~~R~~iA~~lL~~l~~l~~~~~~ 81 (188)
T PF12260_consen 8 NEPLLLQLLQGSEPFPKLLGSC----GR-FYVVEYVGAGSLYGIYRPLSQ-FLQSPWEQRAKIALQLLELLEELDHGPLG 81 (188)
T ss_pred cHHHHHHHcCCCCCCCCeeeEC----CC-EEEEEeecCcccccccccccc-ccccCHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 57778888865 6899999998 22 4688998853 3211 111 1346899999999999999999997 3
Q ss_pred CcccccCCCCCEEEcCCCcEEEeeccccccc
Q 035861 137 WVLHRDLKTSNLLLNNQGVLKICDFGMSRQY 167 (332)
Q Consensus 137 ~i~H~di~p~Nili~~~~~~~l~df~~~~~~ 167 (332)
.+.-.|++++|+-++++|++|++|.......
T Consensus 82 ~~~lcDv~~~nfgv~~~~~lk~iDld~v~~~ 112 (188)
T PF12260_consen 82 FFYLCDVSPDNFGVNDDGRLKLIDLDDVFVE 112 (188)
T ss_pred cEEEeecchHHeEEeCCCcEEEEechhcchh
Confidence 4788999999999999999999999876554
No 472
>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]
Probab=97.93 E-value=6.4e-06 Score=69.76 Aligned_cols=145 Identities=16% Similarity=0.191 Sum_probs=94.6
Q ss_pred cccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccc------cC--------CCcchhHHHHHHhhCC-CC
Q 035861 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLE------YG--------FPISSLREINILLSFD-HP 76 (332)
Q Consensus 12 ~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~------~~--------~~~~~~~e~~~l~~l~-h~ 76 (332)
-+.++..||-|--+.+|.+-+. .|.+.++|.-+....+-..... .. -..+..+|...|+.|. |.
T Consensus 93 v~svGnqIGVGKESDIY~v~d~-~G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa~kEfafmkaL~e~g 171 (465)
T KOG2268|consen 93 VESVGNQIGVGKESDIYVVADE-EGNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLAATKEFAFMKALYERG 171 (465)
T ss_pred hhhhccccccccccceEEEecC-CCCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHHHHHHHHHHHHHHHcC
Confidence 3678899999999999999874 5888899876543321111000 00 0112346777776663 32
Q ss_pred CeeeeeeeEEcCCCeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcE
Q 035861 77 SIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVL 156 (332)
Q Consensus 77 ~i~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~ 156 (332)
.=++ ..+ +.+..++|||.+.|-.+..+.. ......+...+...+--|-.+|++|||.+--||+|+.++.+
T Consensus 172 fpVP--kpi--D~~RH~Vvmelv~g~Pl~~v~~------v~d~~~ly~~lm~~Iv~la~~GlIHgDFNEFNimv~dd~~i 241 (465)
T KOG2268|consen 172 FPVP--KPI--DHNRHCVVMELVDGYPLRQVRH------VEDPPTLYDDLMGLIVRLANHGLIHGDFNEFNIMVKDDDKI 241 (465)
T ss_pred CCCC--Ccc--cccceeeHHHhhcccceeeeee------cCChHHHHHHHHHHHHHHHHcCceecccchheeEEecCCCE
Confidence 2122 111 2256789999998854332221 11223455666667777889999999999999999999999
Q ss_pred EEeeccccccc
Q 035861 157 KICDFGMSRQY 167 (332)
Q Consensus 157 ~l~df~~~~~~ 167 (332)
+++||.-+...
T Consensus 242 ~vIDFPQmvS~ 252 (465)
T KOG2268|consen 242 VVIDFPQMVST 252 (465)
T ss_pred EEeechHhhcc
Confidence 99999876554
No 473
>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]
Probab=97.90 E-value=5.5e-05 Score=65.30 Aligned_cols=150 Identities=25% Similarity=0.251 Sum_probs=98.7
Q ss_pred cccccccccCcEEEEEEEECCCCcEEEEEEeecccCCc---ccc--cccC-------------CCcchhHHHHHHhhCCC
Q 035861 14 EKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRK---EDC--LEYG-------------FPISSLREINILLSFDH 75 (332)
Q Consensus 14 ~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~---~~~--~~~~-------------~~~~~~~e~~~l~~l~h 75 (332)
.+-.+|..|--+.||.+... +|..+|||++..+...- +.. .++. +......|++-|+++..
T Consensus 147 ~inGCiSTGKEANVYHat~~-dG~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNLkRl~~ 225 (520)
T KOG2270|consen 147 EINGCISTGKEANVYHATEE-DGSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNLKRLNN 225 (520)
T ss_pred ecccccccCccceeEeeecC-CCceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHHHHHHh
Confidence 35577889999999998875 57789999986432210 000 0000 11122357777777765
Q ss_pred CCeeeeeeeEEcCCCeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH-HCCcccccCCCCCEEEcCCC
Q 035861 76 PSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLH-DNWVLHRDLKTSNLLLNNQG 154 (332)
Q Consensus 76 ~~i~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh-~~~i~H~di~p~Nili~~~~ 154 (332)
..| ++...+.- ....|||++++++---.=.-.+..++...+..+-.+++.-+.-|. .++++|.||+--|+|+.. |
T Consensus 226 aGI-P~PePIlL--k~hVLVM~FlGrdgw~aPkLKd~~ls~~ka~~~Y~~~v~~MR~lY~~c~LVHADLSEfN~Lyhd-G 301 (520)
T KOG2270|consen 226 AGI-PCPEPILL--KNHVLVMEFLGRDGWAAPKLKDASLSTSKARELYQQCVRIMRRLYQKCRLVHADLSEFNLLYHD-G 301 (520)
T ss_pred cCC-CCCCceee--ecceEeeeeccCCCCcCcccccccCChHHHHHHHHHHHHHHHHHHHHhceeccchhhhhheEEC-C
Confidence 553 32222211 224699999985321111112556888888888888888888876 678999999999999986 8
Q ss_pred cEEEeecccccccC
Q 035861 155 VLKICDFGMSRQYG 168 (332)
Q Consensus 155 ~~~l~df~~~~~~~ 168 (332)
.+.++|.+-+...+
T Consensus 302 ~lyiIDVSQSVE~D 315 (520)
T KOG2270|consen 302 KLYIIDVSQSVEHD 315 (520)
T ss_pred EEEEEEccccccCC
Confidence 99999998776553
No 474
>PRK09550 mtnK methylthioribose kinase; Reviewed
Probab=97.81 E-value=0.00043 Score=61.79 Aligned_cols=82 Identities=21% Similarity=0.202 Sum_probs=48.9
Q ss_pred cccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCC--CC-CeeeeeeeEEcCCCeE
Q 035861 16 LNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFD--HP-SIVNVKEVVMDDHDSV 92 (332)
Q Consensus 16 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~--h~-~i~~~~~~~~~~~~~~ 92 (332)
.+.||.|..+.||++.....++.++||.-........... .........|.+.|+.+. .| .+..++.+ +....
T Consensus 31 ~~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~w-pl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~---D~~~~ 106 (401)
T PRK09550 31 AREIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESW-PLTLDRARIEAEALKIQAKYVPDLVPKVYHY---DEELA 106 (401)
T ss_pred eeEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccc-cccHHHHHHHHHHHHHHHhhCCCCCCeEEEE---CCCCC
Confidence 4679999999999999864335899998642211100000 000113456778887762 23 34444444 23456
Q ss_pred EEEcccccc
Q 035861 93 YMVMEYMEH 101 (332)
Q Consensus 93 ~lv~e~~~~ 101 (332)
++|||++++
T Consensus 107 ~lVME~L~~ 115 (401)
T PRK09550 107 VTVMEDLSD 115 (401)
T ss_pred EEEEecCCC
Confidence 899999865
No 475
>TIGR00938 thrB_alt homoserine kinase, Neisseria type. Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.
Probab=97.79 E-value=0.00026 Score=61.61 Aligned_cols=141 Identities=16% Similarity=0.137 Sum_probs=77.6
Q ss_pred cccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCC--eeeeeee-----EE
Q 035861 14 EKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPS--IVNVKEV-----VM 86 (332)
Q Consensus 14 ~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~--i~~~~~~-----~~ 86 (332)
..++.++.|....+|++... +..+++|+........ .+..|..++..|...+ +..++.. +.
T Consensus 25 ~~i~~~~~G~~n~~y~v~t~--~~~~vLK~~~~~~~~~----------~i~~e~~~l~~L~~~g~pvp~~i~t~~g~~~~ 92 (307)
T TIGR00938 25 LSLKGIAEGVENSNYLLTTD--VGRYILTLYEKRVKAE----------ELPFFLALTTHLAARGLPVPKPVKSRDGRQLS 92 (307)
T ss_pred eeccccCCccccceEEEEeC--CCcEEEEEecCCCCHH----------HHHHHHHHHHHHHHCCCCCCccccCCCCCeeh
Confidence 34667788888899998643 4468889775421111 2235566665553222 2222221 11
Q ss_pred cCCCeEEEEcccccccH-----HH----------HHHhcCCCCCH-------HHHH----------------HHHHHHHH
Q 035861 87 DDHDSVYMVMEYMEHDL-----KW----------LMESMKQPFST-------SEVK----------------CLMLQLLE 128 (332)
Q Consensus 87 ~~~~~~~lv~e~~~~~l-----~~----------~~~~~~~~l~~-------~~~~----------------~i~~~l~~ 128 (332)
...+..++++++++|.. .. .+......++. ...+ .....+..
T Consensus 93 ~~~g~~~~l~e~i~G~~~~~~~~~~~~~~G~~LA~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~ 172 (307)
T TIGR00938 93 TLAGKPACLVEFLQGLSVGRPTAMHCRPVGEVLAWMHLAGAHFPENRKNSLRLEAWHILAEKCFEAAPQLEAHMGAELDK 172 (307)
T ss_pred hcCCeEEEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCCCCCChHHHHHHHHhhhhcccccCHHHHHHHHH
Confidence 22355789999988721 00 01110111100 0000 01112333
Q ss_pred HHHHHHH-------CCcccccCCCCCEEEcCCCcEEEeecccccc
Q 035861 129 GVKYLHD-------NWVLHRDLKTSNLLLNNQGVLKICDFGMSRQ 166 (332)
Q Consensus 129 ~L~~lh~-------~~i~H~di~p~Nili~~~~~~~l~df~~~~~ 166 (332)
.++++.. .+++|||+++.||++++++.+.|+||+.+..
T Consensus 173 ~~~~l~~~~~~~~~~~l~HgD~~~~Nvl~~~~~~~~vIDfd~~~~ 217 (307)
T TIGR00938 173 ELDYLDKFWPRDLPRGVIHADLFPDNVLFDGDSVKGVIDFYFACT 217 (307)
T ss_pred HHHHHHhhhhhcCCCccCCCCCCcCcEEEECCceEEEeecccccC
Confidence 4555542 5799999999999999988778999998753
No 476
>PRK05231 homoserine kinase; Provisional
Probab=97.79 E-value=0.0004 Score=60.81 Aligned_cols=31 Identities=26% Similarity=0.365 Sum_probs=26.5
Q ss_pred CCcccccCCCCCEEEcCCCcEEEeecccccc
Q 035861 136 NWVLHRDLKTSNLLLNNQGVLKICDFGMSRQ 166 (332)
Q Consensus 136 ~~i~H~di~p~Nili~~~~~~~l~df~~~~~ 166 (332)
.+++|||+.|.||+++++...-|+||+.+..
T Consensus 187 ~~liHgD~~~~Nil~~~~~~~~iIDf~~~~~ 217 (319)
T PRK05231 187 RGVIHADLFRDNVLFEGDRLSGFIDFYFACN 217 (319)
T ss_pred cccCCCCCCCCcEEEECCceEEEEecccccC
Confidence 3799999999999999765668999998753
No 477
>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes. The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer
Probab=97.77 E-value=0.00016 Score=62.85 Aligned_cols=30 Identities=33% Similarity=0.435 Sum_probs=26.6
Q ss_pred CcccccCCCCCEEEcCC----CcEEEeecccccc
Q 035861 137 WVLHRDLKTSNLLLNNQ----GVLKICDFGMSRQ 166 (332)
Q Consensus 137 ~i~H~di~p~Nili~~~----~~~~l~df~~~~~ 166 (332)
+++|+|+.+.||+++.+ +.+.++||..+..
T Consensus 180 ~lcH~Dl~~~Nil~~~~~~~~~~i~lIDwEya~~ 213 (302)
T cd05156 180 VFCHNDLQEGNILLLNPSSETKKLVLIDFEYASY 213 (302)
T ss_pred eEEecCCCcCeEEecCCCCCCCcEEEEeeCCCCC
Confidence 57999999999999985 8899999998754
No 478
>cd05153 HomoserineK_II Homoserine Kinase, type II. Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.
Probab=97.69 E-value=0.0002 Score=61.98 Aligned_cols=139 Identities=14% Similarity=0.106 Sum_probs=78.3
Q ss_pred ccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCC--eeeeeee-----EEc
Q 035861 15 KLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPS--IVNVKEV-----VMD 87 (332)
Q Consensus 15 ~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~--i~~~~~~-----~~~ 87 (332)
-++.+..|....+|+.... +..+++|+.... ... .+..|+.++..+...+ +.+.+.. +..
T Consensus 18 ~i~~i~~G~~n~~y~v~~~--~~~~vLr~~~~~--~~~---------~~~~e~~~l~~L~~~g~~vp~~i~~~~g~~~~~ 84 (296)
T cd05153 18 SFEGISAGIENTNYFVTTD--SGRYVLTLFEKV--SAE---------ELPFFLALLDHLAERGLPVPRPIADRDGEYLSE 84 (296)
T ss_pred heecccCccccceEEEEeC--CCcEEEEEcCCC--ChH---------hccHHHHHHHHHHHCCCCCCccccCCCCcEeee
Confidence 3667888888899998654 457899987541 111 2346777776663322 2232221 112
Q ss_pred CCCeEEEEcccccccHH---------------HHHHhcCCCCC--------HHHHH------------HHHHHHHHHHHH
Q 035861 88 DHDSVYMVMEYMEHDLK---------------WLMESMKQPFS--------TSEVK------------CLMLQLLEGVKY 132 (332)
Q Consensus 88 ~~~~~~lv~e~~~~~l~---------------~~~~~~~~~l~--------~~~~~------------~i~~~l~~~L~~ 132 (332)
..+..++++++++|... ..+......+. ..... .....+..++..
T Consensus 85 ~~~~~~~l~~~i~G~~~~~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 164 (296)
T cd05153 85 LAGKPAALVEFLAGEHLTRPTAAHCRQIGEALARLHLAAQSFPGERNNLRGLAWIRELGKDLLPLLSAEDRALLADELAR 164 (296)
T ss_pred eCCceEEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHhccCCccCCCcCCcHHHHHHHHHhccccCHHHHHHHHHHHHH
Confidence 23456889999987321 00110000000 00000 011112334444
Q ss_pred HHH-------CCcccccCCCCCEEEcCCCcEEEeecccccc
Q 035861 133 LHD-------NWVLHRDLKTSNLLLNNQGVLKICDFGMSRQ 166 (332)
Q Consensus 133 lh~-------~~i~H~di~p~Nili~~~~~~~l~df~~~~~ 166 (332)
+.+ .+++|||+.|.||++++++.+.|+||+.+..
T Consensus 165 l~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~iIDfe~a~~ 205 (296)
T cd05153 165 QDAFDPSDLPRGVIHADLFRDNVLFDGDELSGVIDFYFACT 205 (296)
T ss_pred HHhhhhhcCCCcCCccCcCcccEEEeCCceEEEeehhhhcC
Confidence 443 4699999999999999987788999997754
No 479
>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]
Probab=97.50 E-value=0.00023 Score=64.19 Aligned_cols=173 Identities=20% Similarity=0.278 Sum_probs=106.0
Q ss_pred chhHHHHHHhhCCCCCeeeeeeeEEcCCCeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccc
Q 035861 62 SSLREINILLSFDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHR 141 (332)
Q Consensus 62 ~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~ 141 (332)
+++.....++.+.|+|...+..+.-.......+|+|+++-++.+.....+ +-..... +|+
T Consensus 28 ~ilgr~~~lktl~~~~l~~yl~~~r~~~~r~IVV~e~~~~Sled~~~~~~--l~~~s~~------------------~~~ 87 (725)
T KOG1093|consen 28 QILGRFQYLKSLQHDNLCQYLDFSRGKHERVIVVMEHYTMSLEDILKTGN--LKDESLL------------------AHG 87 (725)
T ss_pred HHhhhhHHHHhhcCccceeeEeeecCccceEEEEehhhccchHHHHHhcc--cchhhhc------------------ccc
Confidence 45677888999999999999988755556688999999999888776643 2111111 222
Q ss_pred cCCCCCEEEcCCCcEEEeecccccccCCCCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCC
Q 035861 142 DLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGT 221 (332)
Q Consensus 142 di~p~Nili~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~ 221 (332)
+.+.|++.. +| ..+... | ....+++||||+|.++.++..|...+...
T Consensus 88 -~~~~~~~~~-------td-~~~t~~------------------~------~~~~pKsdVwsl~~i~~el~L~~~l~~~~ 134 (725)
T KOG1093|consen 88 -VLHLNIIYI-------TD-HFLTKY------------------P------SPIGPKSDVWSLGFIILELYLGISLEAEL 134 (725)
T ss_pred -cceehhhhc-------cc-cccccC------------------C------CCCCcchhhhhHHHHHHHHHHhhHHHHHH
Confidence 122233322 22 111110 1 11124999999999999999988777665
Q ss_pred ChHHHHHHHHHHcCCCCCCcccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHH
Q 035861 222 TEVDQIDKIFKTLGTPTETIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVD 301 (332)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ 301 (332)
...+....+.+...-+.....- ...... . -.++....++..+|+-..|..||...
T Consensus 135 ~~s~~l~~i~k~~~~d~~~~~~-----------------a~e~~~----~----~~~d~~~~~~~~~c~~~~~~ir~l~~ 189 (725)
T KOG1093|consen 135 TESEYLEILLKYYTDDQELLST-----------------AMEHLI----Q----LLADKKRLPLLKKCLWLEPIIRPLPM 189 (725)
T ss_pred HHHHHHHHHHHhccCchhHHHH-----------------HHHHHH----H----HhhhHhHHHHhccCCccccccccchh
Confidence 5444444443322111110000 000000 0 01566778999999999999999999
Q ss_pred HHhcCCCCCCC
Q 035861 302 DALNHYWFHEV 312 (332)
Q Consensus 302 ell~hp~f~~~ 312 (332)
++.+++-|...
T Consensus 190 ~~~k~~i~~ev 200 (725)
T KOG1093|consen 190 ELSKRCSFTEV 200 (725)
T ss_pred HHhcCccHHHH
Confidence 99999888654
No 480
>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]
Probab=97.48 E-value=0.0011 Score=57.29 Aligned_cols=32 Identities=16% Similarity=0.311 Sum_probs=28.6
Q ss_pred CcccccCCCCCEEEcCCCcEEEeecccccccC
Q 035861 137 WVLHRDLKTSNLLLNNQGVLKICDFGMSRQYG 168 (332)
Q Consensus 137 ~i~H~di~p~Nili~~~~~~~l~df~~~~~~~ 168 (332)
.++|||+++.|+++++.+-+-|+||+.+..-+
T Consensus 199 ~lvHGD~~~gNlii~~~~~~gVlDwe~~~lGD 230 (321)
T COG3173 199 VLVHGDYRPGNLIIDPGRPTGVLDWELATLGD 230 (321)
T ss_pred eeeeCCcccCCEEEeCCCeeEEEeccccccCC
Confidence 38999999999999999999999999987643
No 481
>TIGR01767 MTRK 5-methylthioribose kinase. This enzyme is involved in the methionine salvage pathway in certain bacteria.
Probab=97.48 E-value=0.0023 Score=56.11 Aligned_cols=77 Identities=19% Similarity=0.226 Sum_probs=47.6
Q ss_pred cccccCcEEEEEEEECCCCcEEEEEEeecccCC-c---ccccccCCCcchhHHHHHHhhCC--CCCeeeeeeeEEcCCCe
Q 035861 18 KISEGTYGIVYRARDKKSGEIVALKKVKMNVGR-K---EDCLEYGFPISSLREINILLSFD--HPSIVNVKEVVMDDHDS 91 (332)
Q Consensus 18 ~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~-~---~~~~~~~~~~~~~~e~~~l~~l~--h~~i~~~~~~~~~~~~~ 91 (332)
.||.|....||++.....++.++||.-...... . .... .+..-|.+.|+... .|..++-+..+ +...
T Consensus 2 EigdGnlN~VfrV~~~~g~~svIVKQAlp~vRv~g~~wpl~~-----~R~~~E~~~L~~~~~~~P~~vP~vy~~--D~e~ 74 (370)
T TIGR01767 2 EVGDGNLNLVFHVYDQEGDRAAIVKQALPYVRVVGESWPLTL-----DRARIESSALIRQGEHVPHLVPRIFHF--DTEM 74 (370)
T ss_pred cCCCCceEEEEEEEcCCCCeeEEEEEcCHHHhhcCCCCCCCc-----cHHHHHHHHHHHhhccCccccCeEEEE--cccc
Confidence 589999999999997543367999986543321 1 1111 13446777776653 35444433333 3355
Q ss_pred EEEEcccccc
Q 035861 92 VYMVMEYMEH 101 (332)
Q Consensus 92 ~~lv~e~~~~ 101 (332)
..+|||+++.
T Consensus 75 ~~~vMEdL~~ 84 (370)
T TIGR01767 75 AVTVMEDLSH 84 (370)
T ss_pred ceehHhhCcc
Confidence 6799999853
No 482
>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported
Probab=97.39 E-value=0.00091 Score=57.10 Aligned_cols=30 Identities=17% Similarity=0.400 Sum_probs=25.3
Q ss_pred CcccccCCCCCEEEcCCCc-EEEeecccccc
Q 035861 137 WVLHRDLKTSNLLLNNQGV-LKICDFGMSRQ 166 (332)
Q Consensus 137 ~i~H~di~p~Nili~~~~~-~~l~df~~~~~ 166 (332)
.++|||+++.||++++++. .-|+||+.+..
T Consensus 186 ~lvHGD~~~~Nilv~~~~~~~gviDWe~a~i 216 (276)
T cd05152 186 VLVHGDLHPGHILIDEDARVTGLIDWTEAKV 216 (276)
T ss_pred eeEeCCCCCCcEEEeCCCCEEEEECcHhccc
Confidence 3799999999999997565 46999998865
No 483
>PLN02421 phosphotransferase, alcohol group as acceptor/kinase
Probab=97.37 E-value=0.0016 Score=57.19 Aligned_cols=30 Identities=37% Similarity=0.542 Sum_probs=26.0
Q ss_pred cccccCCCCCEEEcC-CCcEEEeeccccccc
Q 035861 138 VLHRDLKTSNLLLNN-QGVLKICDFGMSRQY 167 (332)
Q Consensus 138 i~H~di~p~Nili~~-~~~~~l~df~~~~~~ 167 (332)
++|+|+.+.||++++ ++.++++||..|...
T Consensus 184 ~CHnDl~~~NiL~~~~~~~l~lID~EYag~n 214 (330)
T PLN02421 184 FAHNDLLSGNLMLNEDEGKLYFIDFEYGSYS 214 (330)
T ss_pred EEECCCCcccEEEeCCCCcEEEEcccccCCC
Confidence 789999999999975 478999999988653
No 484
>PLN02236 choline kinase
Probab=97.30 E-value=0.0014 Score=57.95 Aligned_cols=138 Identities=13% Similarity=0.169 Sum_probs=76.5
Q ss_pred ccccccccCcEEEEEEEECC----CCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCee-eeeeeEEcCC
Q 035861 15 KLNKISEGTYGIVYRARDKK----SGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIV-NVKEVVMDDH 89 (332)
Q Consensus 15 ~~~~lg~g~~g~v~~~~~~~----~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~-~~~~~~~~~~ 89 (332)
-+..+..|-...+|++.... +++.+++|+..... +....+ ..|..+++.+...++. ++++.+ .+
T Consensus 40 ~i~~l~gGlTN~~y~v~~~~~~~~~~~~~v~Ri~g~~t---~~~idR------~~E~~~~~~l~~~gl~P~~~~~~-~~- 108 (344)
T PLN02236 40 QVIPLKGAMTNEVFQIKWPTKEGNLGRKVLVRIYGEGV---ELFFDR------DDEIRTFECMSRHGQGPRLLGRF-PN- 108 (344)
T ss_pred EEEEcCCcccceeEEEEeCCCCCCCCCeEEEEEccCCC---Ceeech------HHHHHHHHHHHHcCCCCceEEEE-CC-
Confidence 34556668888999987532 24679999886542 121111 3688888877544443 344443 33
Q ss_pred CeEEEEcccccccHHH-----------HH-------HhcCC-----CCCHHHHHHHHHHH-----------------HHH
Q 035861 90 DSVYMVMEYMEHDLKW-----------LM-------ESMKQ-----PFSTSEVKCLMLQL-----------------LEG 129 (332)
Q Consensus 90 ~~~~lv~e~~~~~l~~-----------~~-------~~~~~-----~l~~~~~~~i~~~l-----------------~~~ 129 (332)
. .|.+|++|..+. .+ ..... ......+..+..++ ...
T Consensus 109 g---~v~efi~g~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~l~~~ 185 (344)
T PLN02236 109 G---RVEEFIHARTLSAADLRDPEISALIAAKLREFHSLDMPGPKNVLLWDRLRNWLKEAKNLCSPEEAKEFRLDSLEDE 185 (344)
T ss_pred c---eEEEeeCCCCCCHHHcCChHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhhcCcchhhhcCHHHHHHH
Confidence 2 467777652211 11 00010 11122222332111 111
Q ss_pred HHHHH--------HCCcccccCCCCCEEEcC-CCcEEEeecccccc
Q 035861 130 VKYLH--------DNWVLHRDLKTSNLLLNN-QGVLKICDFGMSRQ 166 (332)
Q Consensus 130 L~~lh--------~~~i~H~di~p~Nili~~-~~~~~l~df~~~~~ 166 (332)
+..|. ...++|+|+++.||++++ ++.+.++||..+..
T Consensus 186 ~~~L~~~~~~~~~~~~~cH~Dl~~~Nil~~~~~~~~~lID~Eya~~ 231 (344)
T PLN02236 186 INLLEKELSGDDQEIGFCHNDLQYGNIMIDEETRAITIIDYEYASY 231 (344)
T ss_pred HHHHHHHhcccCCCceEEeCCCCcCcEEEeCCCCcEEEEeehhccc
Confidence 22221 225899999999999986 46899999998764
No 485
>PRK12396 5-methylribose kinase; Reviewed
Probab=97.19 E-value=0.004 Score=55.33 Aligned_cols=81 Identities=19% Similarity=0.169 Sum_probs=50.2
Q ss_pred cccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCC--CCCeeeeeeeEEcCCCeEE
Q 035861 16 LNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFD--HPSIVNVKEVVMDDHDSVY 93 (332)
Q Consensus 16 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~--h~~i~~~~~~~~~~~~~~~ 93 (332)
.+.||.|.-+.||++.+...++.++||.-.......+... -...+..-|.+.|+.+. .|..++-+..+ +.....
T Consensus 34 ~~eigdGnlN~VfrV~~~~~~~svIVKQAlp~vRv~~swp--L~~~R~~~E~~aL~~~~~~~P~~VP~vy~~--D~e~~~ 109 (409)
T PRK12396 34 CKEIGDGNLNYVFRVWDEQKNISVIVKQAGDTARISDEFK--LSTNRIRIESDVLQLEEELAPGLVPKVYLF--DSVMNC 109 (409)
T ss_pred eeEcCCCceEEEEEEeeCCCCceEEEEeccHhhccCCCCC--CChHHHHHHHHHHHHHHhhCCCcCCeEEEE--CcHHhh
Confidence 5689999999999999853356799998654333211100 01123456778887663 45555544444 335567
Q ss_pred EEccccc
Q 035861 94 MVMEYME 100 (332)
Q Consensus 94 lv~e~~~ 100 (332)
+|||+++
T Consensus 110 ~vMEdL~ 116 (409)
T PRK12396 110 CVMEDLS 116 (409)
T ss_pred HHHHhCc
Confidence 8999885
No 486
>PLN02756 S-methyl-5-thioribose kinase
Probab=96.92 E-value=0.016 Score=51.88 Aligned_cols=81 Identities=14% Similarity=0.139 Sum_probs=48.7
Q ss_pred ccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCC--C-CCeeeeeeeEEcCCCe
Q 035861 15 KLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFD--H-PSIVNVKEVVMDDHDS 91 (332)
Q Consensus 15 ~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~--h-~~i~~~~~~~~~~~~~ 91 (332)
..+.||.|....||++... +..++||.-........... .....+...|+..|+.+. . ..+.+++.+. + ..
T Consensus 36 ~~~eiggGn~N~VyrV~~~--~~svVVKqa~p~~r~vga~w-pl~~~R~~~Ea~aL~~~~~~~p~~VPkVy~~d-e--d~ 109 (418)
T PLN02756 36 KIKEVGDGNLNFVYIVVSS--SGSFVIKQALPYIRCIGESW-PMTKERAYFEATALREHGRLCPDHVPEVYHFD-R--TM 109 (418)
T ss_pred eEEEcCCCceeeEEEEEcC--CccEEEEeCCccccCCCccc-cCCccHHHHHHHHHHHhhhcCCCCCCeEEEEC-C--CC
Confidence 4678899999999999874 45699998763332111000 000113345677776653 2 3555666655 2 33
Q ss_pred EEEEcccccc
Q 035861 92 VYMVMEYMEH 101 (332)
Q Consensus 92 ~~lv~e~~~~ 101 (332)
.+++||++++
T Consensus 110 ~vlvME~L~~ 119 (418)
T PLN02756 110 ALIGMRYLEP 119 (418)
T ss_pred CEEEEeecCC
Confidence 5788999965
No 487
>PTZ00384 choline kinase; Provisional
Probab=96.91 E-value=0.0079 Score=53.77 Aligned_cols=30 Identities=27% Similarity=0.237 Sum_probs=24.9
Q ss_pred CCcccccCCCCCEEEcCCCcEEEeecccccc
Q 035861 136 NWVLHRDLKTSNLLLNNQGVLKICDFGMSRQ 166 (332)
Q Consensus 136 ~~i~H~di~p~Nili~~~~~~~l~df~~~~~ 166 (332)
...+|+|+-+.||+.++ +.+.++||..|..
T Consensus 227 ~VfCHNDL~~gNIL~~~-~~l~lID~EYA~~ 256 (383)
T PTZ00384 227 VLFCHNDLFFTNILDFN-QGIYFIDFDFAGF 256 (383)
T ss_pred eeeeeccCCcccEEecC-CCEEEEEeccccC
Confidence 45799999999998764 5699999988764
No 488
>TIGR02904 spore_ysxE spore coat protein YsxE. Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.
Probab=96.86 E-value=0.016 Score=50.47 Aligned_cols=30 Identities=17% Similarity=0.182 Sum_probs=27.5
Q ss_pred CcccccCCCCCEEEcCCCcEEEeecccccc
Q 035861 137 WVLHRDLKTSNLLLNNQGVLKICDFGMSRQ 166 (332)
Q Consensus 137 ~i~H~di~p~Nili~~~~~~~l~df~~~~~ 166 (332)
+++|||+.+.|+++++++.+.++||..+..
T Consensus 197 ~lcHgD~~~~Nvl~~~~~~~~iIDfd~~~~ 226 (309)
T TIGR02904 197 VLVHGKLSLSHFLYDETRGGYFINFEKASF 226 (309)
T ss_pred eeeCCCCcHHhEEEcCCCCEEEEEhhhccc
Confidence 699999999999999999999999997754
No 489
>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]
Probab=96.71 E-value=0.0073 Score=52.55 Aligned_cols=90 Identities=18% Similarity=0.239 Sum_probs=66.0
Q ss_pred CCCCCeeeeeeeEEcCCCeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC-CcccccCCCCCEEEc
Q 035861 73 FDHPSIVNVKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDN-WVLHRDLKTSNLLLN 151 (332)
Q Consensus 73 l~h~~i~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~-~i~H~di~p~Nili~ 151 (332)
...++....+-+-.++..+.|++|++.++.+.. -.....+++..++.+.+..++-+..+ ..-|+|+.-.||+|+
T Consensus 282 ~g~~~~e~~~vv~~de~~y~yl~~kdhgt~is~-----ik~~~~~e~lsff~s~~sil~~lekkf~fehrnlt~~niLId 356 (488)
T COG5072 282 CGSVFLETLKVVSLDETLYLYLHFKDHGTPISI-----IKADRSEEELSFFWSCISILDILEKKFPFEHRNLTLDNILID 356 (488)
T ss_pred ccchhhhcceEEecCCceEEEEEEecCCceeee-----eecccHHHHHHHHHHHHHHHhhhhhcCCcccccccccceeee
Confidence 344444443333334446778888888775421 23346788889999999988888854 578999999999999
Q ss_pred CCCcEEEeecccccccC
Q 035861 152 NQGVLKICDFGMSRQYG 168 (332)
Q Consensus 152 ~~~~~~l~df~~~~~~~ 168 (332)
+|+|.|+||.+++...
T Consensus 357 -~GnvtLIDfklsRl~~ 372 (488)
T COG5072 357 -EGNVTLIDFKLSRLSY 372 (488)
T ss_pred -cCceEEEEeeeeeccc
Confidence 8999999999998543
No 490
>KOG1826 consensus Ras GTPase activating protein RasGAP/neurofibromin [Defense mechanisms]
Probab=96.68 E-value=0.00045 Score=69.86 Aligned_cols=153 Identities=12% Similarity=0.009 Sum_probs=105.0
Q ss_pred HHHHHhhCCCCCeeeeeeeEEcC-CCeEEEEccccccc-HHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHHC-C--
Q 035861 66 EINILLSFDHPSIVNVKEVVMDD-HDSVYMVMEYMEHD-LKWLMESMKQ---PFSTSEVKCLMLQLLEGVKYLHDN-W-- 137 (332)
Q Consensus 66 e~~~l~~l~h~~i~~~~~~~~~~-~~~~~lv~e~~~~~-l~~~~~~~~~---~l~~~~~~~i~~~l~~~L~~lh~~-~-- 137 (332)
|...++...|+++...+.-.... ....++.++++.++ +.+.+.+... .++...+.....+...+..-+|+. |
T Consensus 1279 e~de~~~~~h~~~~~~p~rI~ps~s~ee~~r~~~~~~g~~f~iIikg~ee~~~ld~~~v~~~~kvsvl~~~~~ls~tnlg 1358 (2724)
T KOG1826|consen 1279 ERDELREAKHYLTEVDPLRIPPSESTEEYIRSLYVEFGKLFSIIIKGLEESPDLDRSPVHLRHKVSVLNRNVILSLTNLG 1358 (2724)
T ss_pred hhhhhhhhhceeeecccccCCCCCChHHHHHHHHHHHhHHHHHHHhccccCCcchhchHHHHHHHHHhccchhhhcccCC
Confidence 33444555788877766655332 24467889998864 4555544322 344444444444446666666643 2
Q ss_pred --cccccCCCCCEEEcCCCcEEEeecccccccCCCCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCC
Q 035861 138 --VLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKK 215 (332)
Q Consensus 138 --i~H~di~p~Nili~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~ 215 (332)
.+|.++++.|.+|..+.+++++++|+.+.............+++.|+.|+.... -.++.++|+|..|+.+|...-|.
T Consensus 1359 ~T~v~~~Lkf~lpmIVtny~v~~gk~gLdKIknp~~sf~Gl~l~sp~~v~qli~N~-ik~t~rsdilr~s~~ly~rs~~n 1437 (2724)
T KOG1826|consen 1359 NTNVSKSLKFTLPMIVTNYNVKLGKGGLDKIKNPVLSFFGLELCSPIYVLQLIKNE-IKFTKRSDILRRSLSLYLRSDGN 1437 (2724)
T ss_pred ccchhhhhhhhccceecCCcccccccccccccCchHhhhhhhhCCHHHHHHHHHHH-HhhhhHHHHHHHHHHHHHHhccc
Confidence 689999999999999999999999999843333333445566778888887655 56777899999999999998777
Q ss_pred CCCC
Q 035861 216 PLFS 219 (332)
Q Consensus 216 ~pf~ 219 (332)
.+|.
T Consensus 1438 ~~fi 1441 (2724)
T KOG1826|consen 1438 AYFI 1441 (2724)
T ss_pred HHHH
Confidence 7764
No 491
>PRK10593 hypothetical protein; Provisional
Probab=96.61 E-value=0.014 Score=50.49 Aligned_cols=108 Identities=14% Similarity=0.069 Sum_probs=70.0
Q ss_pred cccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCC---CCeeeeeeeEEc-
Q 035861 12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDH---PSIVNVKEVVMD- 87 (332)
Q Consensus 12 ~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~- 87 (332)
...-.+.||.|..+.||+.... +..+++|..+.... .. .+..|+..++.+.. ..+..+++.+..
T Consensus 15 ~~~~~~~i~~G~~~~vy~~~~~--~~~~~~k~~~~~~~-~~---------~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~ 82 (297)
T PRK10593 15 KLSRVECISEQPYAALWALYDS--QGNPMPLMARSFST-PG---------VAQQEAWKLSMLARSGTVRMPTVYGVMTHE 82 (297)
T ss_pred hhheeeecCCccceeEEEEEcC--CCCEEEEEeccccc-ch---------HHHHHHHHHHHHccCCCCCcCcEEEEeccC
Confidence 4455678999999999998654 33577787532111 11 34588888887743 346666665532
Q ss_pred -CCCeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 035861 88 -DHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDN 136 (332)
Q Consensus 88 -~~~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~ 136 (332)
..+..++|||+++|..... ...+......+..+++.+|+.||+.
T Consensus 83 ~~~g~~~LVmE~i~G~~~~~-----~~~~~~~~~~l~~~l~~~La~LH~~ 127 (297)
T PRK10593 83 QSPGPDVLLLERLRGVSVEA-----PARTPERWEQLKDQIVEGLLAWHRI 127 (297)
T ss_pred CcCCCeEEEEeccCCEecCC-----CCCCHHHHHHHHHHHHHHHHHHhCC
Confidence 2355899999999864322 1123444566777888888888874
No 492
>PTZ00296 choline kinase; Provisional
Probab=96.44 E-value=0.021 Score=52.14 Aligned_cols=29 Identities=31% Similarity=0.508 Sum_probs=24.3
Q ss_pred CcccccCCCCCEEEcCCCcEEEeecccccc
Q 035861 137 WVLHRDLKTSNLLLNNQGVLKICDFGMSRQ 166 (332)
Q Consensus 137 ~i~H~di~p~Nili~~~~~~~l~df~~~~~ 166 (332)
.++|+|+.+.||+.+.+ .+.|+||..|..
T Consensus 285 VfCHNDl~~~NiL~~~~-~l~LIDfEYAg~ 313 (442)
T PTZ00296 285 VFCHNDLQENNIINTNK-CLRLIDFEYSGY 313 (442)
T ss_pred eEEeCCCCccceeecCC-CEEEEeeccccc
Confidence 47899999999987654 499999988754
No 493
>PRK06148 hypothetical protein; Provisional
Probab=96.24 E-value=0.06 Score=54.61 Aligned_cols=31 Identities=26% Similarity=0.489 Sum_probs=26.4
Q ss_pred CCcccccCCCCCEEEcCCC--cEE-Eeecccccc
Q 035861 136 NWVLHRDLKTSNLLLNNQG--VLK-ICDFGMSRQ 166 (332)
Q Consensus 136 ~~i~H~di~p~Nili~~~~--~~~-l~df~~~~~ 166 (332)
.+++|+|+++.||+++.++ ++. |+|||.+..
T Consensus 203 ~~vIHgDln~~NiLv~~~~~~~isGiIDFgDa~~ 236 (1013)
T PRK06148 203 AQVIHNDANDYNILVDADDGERISGLIDFGDAVH 236 (1013)
T ss_pred cceECCCCCcccEEEcCCCCcceEEEEECccccc
Confidence 4799999999999999875 555 999998754
No 494
>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []. Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.
Probab=96.11 E-value=0.085 Score=45.25 Aligned_cols=75 Identities=17% Similarity=0.188 Sum_probs=42.9
Q ss_pred ccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCC---CCCeeeeeeeEEcCC
Q 035861 13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFD---HPSIVNVKEVVMDDH 89 (332)
Q Consensus 13 y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~---h~~i~~~~~~~~~~~ 89 (332)
.+-.+.++.|..+.+|+.. .+++.+.||+-..... . .+..|+.-|+.|. .-.+.+.+++....
T Consensus 19 i~~~~~v~GG~i~~a~~~~--~~~~~~FvK~~~~~~~-~----------~f~~Ea~gL~~L~~~~~~~vP~vi~~G~~~- 84 (288)
T PF03881_consen 19 ITSIEPVSGGDINEAYRLD--TDGGSYFVKVNSESGR-D----------MFEGEAEGLKALAEANPIRVPKVIAWGEYD- 84 (288)
T ss_dssp --EEEEE--SSSSEEEEEE--TTS-EEEEEEEEGGGC-C----------HHHHHHHHHHHHCHTTTSBS--EEEEEE-S-
T ss_pred eeeeEecCCCChhheEEEE--CCCccEEEEecChhhH-H----------HHHHHHHHHHHHHhcCCCCCCeEEEEEeec-
Confidence 4556779999999999988 4588899998872211 1 3457887777773 33455556555333
Q ss_pred CeEEEEcccccc
Q 035861 90 DSVYMVMEYMEH 101 (332)
Q Consensus 90 ~~~~lv~e~~~~ 101 (332)
...++|+|+++.
T Consensus 85 ~~~fLlle~l~~ 96 (288)
T PF03881_consen 85 DDAFLLLEFLEM 96 (288)
T ss_dssp SCCEEEEE----
T ss_pred CCceEEEEeecC
Confidence 445899999864
No 495
>TIGR02906 spore_CotS spore coat protein, CotS family. Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.
Probab=95.42 E-value=0.036 Score=48.24 Aligned_cols=29 Identities=24% Similarity=0.391 Sum_probs=25.7
Q ss_pred CCcccccCCCCCEEEcCCCcEEEeeccccc
Q 035861 136 NWVLHRDLKTSNLLLNNQGVLKICDFGMSR 165 (332)
Q Consensus 136 ~~i~H~di~p~Nili~~~~~~~l~df~~~~ 165 (332)
.+++|||+++.||+++. +.+.|+||+.+.
T Consensus 187 ~~liHgD~~~~Nil~~~-~~i~lIDfd~~~ 215 (313)
T TIGR02906 187 RGFCHQDYAYHNILLKD-NEVYVIDFDYCT 215 (313)
T ss_pred CceEcCCCCcccEEEeC-CcEEEEECcccc
Confidence 47899999999999998 678999999764
No 496
>PRK10271 thiK thiamine kinase; Provisional
Probab=95.24 E-value=0.018 Score=45.70 Aligned_cols=29 Identities=28% Similarity=0.488 Sum_probs=25.7
Q ss_pred cccccCCCCCEEEcCCCcEEEeeccccccc
Q 035861 138 VLHRDLKTSNLLLNNQGVLKICDFGMSRQY 167 (332)
Q Consensus 138 i~H~di~p~Nili~~~~~~~l~df~~~~~~ 167 (332)
.+|+|+.|.||++++++ ++|+||+.+...
T Consensus 79 p~H~D~~~~N~~~~~~~-~~lIDwe~a~~g 107 (188)
T PRK10271 79 PLHMDVHAGNLVHSASG-LRLIDWEYAGDG 107 (188)
T ss_pred eecCCCCCccEEEECCC-EEEEeCCcccCC
Confidence 68999999999998877 899999988754
No 497
>COG0510 ycfN Thiamine kinase and related kinases [Coenzyme transport and metabolism]
Probab=95.05 E-value=0.039 Score=46.84 Aligned_cols=46 Identities=24% Similarity=0.343 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHHHHC--CcccccCCCCCEEEcCCCcEEEeeccccccc
Q 035861 122 LMLQLLEGVKYLHDN--WVLHRDLKTSNLLLNNQGVLKICDFGMSRQY 167 (332)
Q Consensus 122 i~~~l~~~L~~lh~~--~i~H~di~p~Nili~~~~~~~l~df~~~~~~ 167 (332)
.+..+-.++.-.+.. -++|+|+.|.|++.++.+.+.|+||..|...
T Consensus 137 ~~~~l~~~l~~~~~~~~v~cH~Dl~~~N~l~t~~~~l~LIDWEyAg~~ 184 (269)
T COG0510 137 KLKELRRALEEVPKDDLVPCHNDLNPGNLLLTDKGGLFLIDWEYAGLN 184 (269)
T ss_pred HHHHHHHHhhhcCCCceeeecCCCCccceEEcCCCcEEEEecccCCCc
Confidence 334444444444433 4889999999999999999999999988653
No 498
>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2.7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....
Probab=94.50 E-value=0.073 Score=43.45 Aligned_cols=30 Identities=33% Similarity=0.575 Sum_probs=21.3
Q ss_pred CcccccCCCCCEEE-cCCCcEEEeecccccc
Q 035861 137 WVLHRDLKTSNLLL-NNQGVLKICDFGMSRQ 166 (332)
Q Consensus 137 ~i~H~di~p~Nili-~~~~~~~l~df~~~~~ 166 (332)
.++|+|+.+.||++ +.++.++++||..|..
T Consensus 144 v~cHnDl~~~Nil~~~~~~~~~lIDfEya~~ 174 (211)
T PF01633_consen 144 VFCHNDLNPGNILINNKDGEVKLIDFEYAGY 174 (211)
T ss_dssp EEE-S--SGGGEEETSSSSCEEE--GTT-EE
T ss_pred eEeeccCccccEEeccCCCeEEEecHHHHhh
Confidence 48899999999999 8889999999998764
No 499
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=94.39 E-value=0.0057 Score=55.18 Aligned_cols=81 Identities=22% Similarity=0.388 Sum_probs=64.1
Q ss_pred CcccccccchhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeee
Q 035861 1 MNMLQGCRSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVN 80 (332)
Q Consensus 1 ~~~~~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~ 80 (332)
|+++.-++..+++..+.++|.|+||+|+.+....++-.+|||.+......... .+.+++...+..+.|++++.
T Consensus 39 ~~~~~~sr~a~~~e~~~~~~~~g~~~~~~~~n~~d~~~~avkritlkn~e~s~-------~rvl~~~~s~a~feh~g~~~ 111 (516)
T KOG1033|consen 39 NKRVITSREANDFEPGQCLGRGGFGVVFSAQNKADENKYAVKRITLKNREESR-------SRVLREVSSLAEFEHPGIKR 111 (516)
T ss_pred hhhhhhhhhhccccccccccccCccccCCccccccchhhHHHHhcccchhhhh-------hhhhccccchhhhcccchhh
Confidence 35555677788999999999999999999999887878999998765433222 24567888899999999999
Q ss_pred eeeeEEcC
Q 035861 81 VKEVVMDD 88 (332)
Q Consensus 81 ~~~~~~~~ 88 (332)
+...+...
T Consensus 112 ~~ha~~~~ 119 (516)
T KOG1033|consen 112 YFHAWYER 119 (516)
T ss_pred heeceecC
Confidence 88877544
No 500
>KOG1236 consensus Predicted unusual protein kinase [General function prediction only]
Probab=93.68 E-value=0.15 Score=45.38 Aligned_cols=60 Identities=15% Similarity=0.080 Sum_probs=41.0
Q ss_pred EEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH-HCCcccccCCCCCEEEcC
Q 035861 92 VYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLH-DNWVLHRDLKTSNLLLNN 152 (332)
Q Consensus 92 ~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh-~~~i~H~di~p~Nili~~ 152 (332)
..++-+|..|-......+ ....+++...+++.-...||--+- --+++|.|++|.||++.-
T Consensus 320 ~vl~E~~~~Gl~v~~~v~-~~~~pe~l~kkva~lg~~AllkMl~vDNFvHaDlHPGNVlirf 380 (565)
T KOG1236|consen 320 LVLVETYERGLSVLRFVK-WKSQPEALVKKVAKLGVNALLKMLIVDNFVHADLHPGNVLIRF 380 (565)
T ss_pred ceeeeeccccccHHhhhh-cccChHHHHHHHHHHHHHHHHHHHHhhcceecccCCCcEEEEe
Confidence 456667777744333333 344566677777777777766654 568999999999999963
Done!