Query         035861
Match_columns 332
No_of_seqs    161 out of 2323
Neff          10.5
Searched_HMMs 13730
Date          Mon Mar 25 11:45:39 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/035861.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/035861hhsearch_scop -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 d2j4za1 d.144.1.7 (A:126-388)  100.0 4.3E-62 3.1E-66  409.9  22.0  258    8-311     3-260 (263)
  2 d1o6la_ d.144.1.7 (A:) Pkb kin 100.0 1.8E-61 1.3E-65  419.5  25.3  277    9-329     3-286 (337)
  3 d1uu3a_ d.144.1.7 (A:) 3-phosp 100.0 9.8E-62 7.1E-66  412.8  22.9  270    8-321     5-282 (288)
  4 d1yhwa1 d.144.1.7 (A:249-541)  100.0   5E-61 3.6E-65  409.1  27.1  256   11-311    20-275 (293)
  5 d1nvra_ d.144.1.7 (A:) Cell cy 100.0 1.9E-61 1.4E-65  407.4  22.4  261    9-311     3-265 (271)
  6 d1ua2a_ d.144.1.7 (A:) Cell di 100.0 3.6E-60 2.6E-64  407.5  29.1  294   15-321     2-295 (299)
  7 d1fota_ d.144.1.7 (A:) cAMP-de 100.0   1E-60 7.4E-65  412.1  23.3  273    9-328     2-281 (316)
  8 d1gz8a_ d.144.1.7 (A:) Cyclin- 100.0   9E-60 6.6E-64  404.4  28.7  291   10-315     1-292 (298)
  9 d2jfla1 d.144.1.7 (A:21-308) S 100.0 4.1E-60   3E-64  403.0  23.8  258   11-311    12-274 (288)
 10 d1koaa2 d.144.1.7 (A:5915-6264 100.0 7.6E-60 5.5E-64  411.7  25.8  272    6-321    21-295 (350)
 11 d2java1 d.144.1.7 (A:3-271) Se 100.0 6.4E-60 4.7E-64  398.2  22.7  257   10-309     3-269 (269)
 12 d1u5ra_ d.144.1.7 (A:) Serine/ 100.0 1.5E-59 1.1E-63  403.3  24.5  257   12-313    16-274 (309)
 13 d1a06a_ d.144.1.7 (A:) Calmodu 100.0 2.8E-59   2E-63  401.5  25.6  259   10-312     8-270 (307)
 14 d1jksa_ d.144.1.7 (A:) Death-a 100.0 4.9E-59 3.6E-63  398.7  25.3  271    9-317     8-282 (293)
 15 d1ob3a_ d.144.1.7 (A:) Cyclin- 100.0 1.1E-58 7.9E-63  395.8  26.9  286   10-311     1-286 (286)
 16 d1rdqe_ d.144.1.7 (E:) cAMP-de 100.0 2.3E-59 1.7E-63  409.0  22.8  273    8-327    38-317 (350)
 17 d1koba_ d.144.1.7 (A:) Twitchi 100.0 6.6E-59 4.8E-63  406.1  25.7  263    7-313    25-290 (352)
 18 d1xjda_ d.144.1.7 (A:) Protein 100.0 1.8E-59 1.3E-63  405.0  20.5  274   10-327     1-278 (320)
 19 d1t4ha_ d.144.1.7 (A:) Protein 100.0 1.5E-58 1.1E-62  389.7  23.8  256   11-310     8-270 (270)
 20 d1omwa3 d.144.1.7 (A:186-549)  100.0 1.3E-58 9.2E-63  406.3  22.4  270    9-317     2-276 (364)
 21 d1phka_ d.144.1.7 (A:) gamma-s 100.0 2.7E-58 1.9E-62  389.7  23.4  267   10-312     2-276 (277)
 22 d1s9ja_ d.144.1.7 (A:) Dual sp 100.0 2.8E-59   2E-63  405.1  16.4  296   10-316     5-308 (322)
 23 d1blxa_ d.144.1.7 (A:) Cyclin- 100.0   1E-56 7.3E-61  387.3  30.1  290    7-314     3-301 (305)
 24 d1unla_ d.144.1.7 (A:) Cyclin- 100.0 2.7E-56   2E-60  382.4  28.6  289   10-313     1-290 (292)
 25 d1tkia_ d.144.1.7 (A:) Titin,  100.0 1.6E-57 1.2E-61  393.1  19.5  258    9-311     3-263 (321)
 26 d3blha1 d.144.1.7 (A:8-325) Ce 100.0 3.5E-56 2.5E-60  386.0  27.3  299    6-316     5-315 (318)
 27 d1xwsa_ d.144.1.7 (A:) Proto-o 100.0 6.4E-57 4.6E-61  381.5  22.0  258   10-315     3-264 (273)
 28 d1q5ka_ d.144.1.7 (A:) Glycoge 100.0 6.7E-56 4.9E-60  388.6  27.0  286   10-316    19-313 (350)
 29 d1cm8a_ d.144.1.7 (A:) MAP kin 100.0 8.7E-56 6.3E-60  387.7  23.9  294    9-319    16-314 (346)
 30 d1k2pa_ d.144.1.7 (A:) Bruton' 100.0 1.6E-54 1.1E-58  362.9  24.8  249   10-306     3-254 (258)
 31 d1uwha_ d.144.1.7 (A:) B-Raf k 100.0 1.7E-54 1.2E-58  366.4  23.3  255   10-306     7-266 (276)
 32 d2ozaa1 d.144.1.7 (A:51-385) M 100.0 1.2E-55 8.7E-60  383.4  16.1  262    6-311     6-277 (335)
 33 d1sm2a_ d.144.1.7 (A:) Tyrosin 100.0 1.9E-54 1.4E-58  364.3  22.5  249   10-306     4-255 (263)
 34 d1o6ya_ d.144.1.7 (A:) Mycobac 100.0   1E-54 7.5E-59  369.1  19.7  262    8-309     4-272 (277)
 35 d1opja_ d.144.1.7 (A:) Abelson 100.0 2.2E-54 1.6E-58  367.8  21.3  250   10-305    16-268 (287)
 36 d2b1pa1 d.144.1.7 (A:46-400) c 100.0 1.2E-54 8.8E-59  381.3  20.2  295    9-314    15-319 (355)
 37 d2gfsa1 d.144.1.7 (A:5-352) MA 100.0 4.5E-54 3.3E-58  377.4  23.5  300   10-328    17-323 (348)
 38 d3bqca1 d.144.1.7 (A:3-330) Pr 100.0 1.4E-54   1E-58  377.3  20.1  289    9-315    33-328 (328)
 39 d1qpca_ d.144.1.7 (A:) Lymphoc 100.0 1.1E-54   8E-59  367.3  17.2  253   10-311    12-270 (272)
 40 d1vzoa_ d.144.1.7 (A:) Ribosom 100.0 9.2E-55 6.7E-59  376.0  17.0  281    9-327    22-315 (322)
 41 d1u59a_ d.144.1.7 (A:) Tyrosin 100.0 4.3E-54 3.1E-58  365.3  19.9  258   11-314     8-276 (285)
 42 d1pmea_ d.144.1.7 (A:) MAP kin 100.0 1.3E-53 9.8E-58  373.1  23.5  290   11-319     8-308 (345)
 43 d1xbba_ d.144.1.7 (A:) Tyrosin 100.0 3.7E-54 2.7E-58  364.6  19.1  249   17-310    13-270 (277)
 44 d1jpaa_ d.144.1.7 (A:) ephb2 r 100.0 2.8E-53 2.1E-57  363.1  23.8  253    9-306    24-286 (299)
 45 d1fmka3 d.144.1.7 (A:249-533)  100.0 2.9E-53 2.1E-57  359.9  21.9  255    9-312    15-275 (285)
 46 d1rjba_ d.144.1.7 (A:) Fl cyto 100.0 2.1E-53 1.5E-57  368.5  20.5  252   11-306    37-320 (325)
 47 d1xkka_ d.144.1.7 (A:) EGF rec 100.0 2.6E-52 1.9E-56  360.6  23.2  250   11-306     9-266 (317)
 48 d1mqba_ d.144.1.7 (A:) epha2 r 100.0   7E-52 5.1E-56  352.2  24.3  251   10-305     6-265 (283)
 49 d1byga_ d.144.1.7 (A:) Carboxy 100.0 8.7E-53 6.3E-57  352.9  17.7  246    9-306     5-253 (262)
 50 d1mp8a_ d.144.1.7 (A:) Focal a 100.0 1.8E-52 1.3E-56  354.3  19.6  251   10-306     6-262 (273)
 51 d1u46a_ d.144.1.7 (A:) Activat 100.0 2.7E-52 1.9E-56  352.4  19.3  254    9-305     6-267 (273)
 52 d1ywna1 d.144.1.7 (A:818-1166) 100.0 3.2E-51 2.4E-55  351.4  19.1  254   10-306    12-290 (299)
 53 d1fvra_ d.144.1.7 (A:) Tie2 ki 100.0 3.1E-51 2.3E-55  352.6  18.6  252    9-306     8-279 (309)
 54 d1ckia_ d.144.1.7 (A:) Casein  100.0 5.8E-50 4.3E-54  343.7  23.3  267    1-311     1-280 (299)
 55 d1lufa_ d.144.1.7 (A:) Musk ty 100.0 1.9E-50 1.4E-54  346.5  19.6  251   10-305    12-294 (301)
 56 d1fgka_ d.144.1.7 (A:) Fibrobl 100.0 4.4E-50 3.2E-54  343.8  21.3  251   10-305    12-289 (299)
 57 d1r0pa_ d.144.1.7 (A:) Hepatoc 100.0 1.1E-49 7.7E-54  342.5  20.4  250   13-306    29-287 (311)
 58 d1p4oa_ d.144.1.7 (A:) Insulin 100.0 5.1E-50 3.7E-54  344.7  18.1  260   10-314    19-302 (308)
 59 d1t46a_ d.144.1.7 (A:) c-KIT r 100.0 5.9E-49 4.3E-53  338.6  21.5  252   10-305    22-300 (311)
 60 d1csna_ d.144.1.7 (A:) Casein  100.0 1.3E-47 9.6E-52  327.4  23.9  250   11-305     5-271 (293)
 61 d1vjya_ d.144.1.7 (A:) Type I  100.0 3.5E-47 2.5E-51  326.0  15.2  259   11-306     3-291 (303)
 62 d1q8ya_ d.144.1.7 (A:) Sky1p { 100.0   1E-46 7.5E-51  332.3  17.4  285   12-313    14-335 (362)
 63 d1zara2 d.144.1.9 (A:91-281) R  99.9 8.8E-26 6.4E-30  179.5   8.2  178   13-208     2-189 (191)
 64 d1j7la_ d.144.1.6 (A:) Type II  98.7 4.9E-08 3.6E-12   79.6  10.2  141   10-166    13-213 (263)
 65 d2pula1 d.144.1.6 (A:5-396) Me  98.2   1E-06 7.5E-11   76.0   7.5   82   16-101    31-115 (392)
 66 d1nd4a_ d.144.1.6 (A:) Aminogl  98.1 4.2E-06   3E-10   67.4   8.7   72   18-102    17-91  (255)
 67 d1nw1a_ d.144.1.8 (A:) Choline  97.4 0.00024 1.8E-08   60.7   8.7   71   16-101    47-125 (395)
 68 d1zyla1 d.144.1.6 (A:4-328) Rd  97.4 0.00023 1.6E-08   59.2   7.8   68   24-101    35-108 (325)
 69 d2ppqa1 d.144.1.6 (A:5-320) Ho  97.1 0.00012 9.1E-09   60.5   3.0   31  136-166   183-213 (316)
 70 d1e7ua4 d.144.1.4 (A:726-1094)  50.0     3.6 0.00026   33.5   2.2   27  140-166   219-245 (369)
 71 d1cjaa_ d.144.1.3 (A:) Actin-f  25.8      31  0.0023   26.9   3.9  137   10-162    68-233 (342)
 72 d1kq8a_ a.4.5.14 (A:) HFH-1 (H  23.9      18  0.0013   21.5   1.8   28  284-311     3-35  (75)
 73 d1d0da_ g.8.1.2 (A:) Anticoagu  23.4      18  0.0013   19.5   1.4   26  180-205    34-59  (60)

No 1  
>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=4.3e-62  Score=409.92  Aligned_cols=258  Identities=31%  Similarity=0.477  Sum_probs=219.9

Q ss_pred             cchhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEc
Q 035861            8 RSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMD   87 (332)
Q Consensus         8 ~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~   87 (332)
                      ..+++|++++.||+|+||+||+|++..+++.||+|++........     .....+.+|+.++++++||||+++++++. 
T Consensus         3 ~~l~dy~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~-----~~~~~~~~E~~il~~l~hpnIv~~~~~~~-   76 (263)
T d2j4za1           3 WALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKA-----GVEHQLRREVEIQSHLRHPNILRLYGYFH-   76 (263)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHT-----TCHHHHHHHHHHHHTCCCTTBCCEEEEEE-
T ss_pred             cchhHeEEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccCh-----HHHHHHHHHHHHHHhcCCCCCCeEEEEEE-
Confidence            357899999999999999999999999999999999975432221     11225678999999999999999999995 


Q ss_pred             CCCeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeeccccccc
Q 035861           88 DHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQY  167 (332)
Q Consensus        88 ~~~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~  167 (332)
                      ++...|+||||++|+.+.......+.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++...
T Consensus        77 ~~~~~~ivmEy~~~g~L~~~l~~~~~l~e~~~~~i~~qi~~al~~lH~~~ivHrDiKp~Nill~~~~~~kl~DFG~a~~~  156 (263)
T d2j4za1          77 DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHA  156 (263)
T ss_dssp             CSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCSCSCC
T ss_pred             ECCEEEEEEeecCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeeeeccccceecCCCCEeecccceeeec
Confidence            44889999999997544444444678999999999999999999999999999999999999999999999999999865


Q ss_pred             CCCCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCC
Q 035861          168 GSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSE  247 (332)
Q Consensus       168 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (332)
                      ...  ......||+.|+|||++.+ ..++.++||||||+++|+|++|..||...+..+....+.+.....          
T Consensus       157 ~~~--~~~~~~Gt~~Y~APE~~~~-~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~----------  223 (263)
T d2j4za1         157 PSS--RRTTLCGTLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF----------  223 (263)
T ss_dssp             CCC--CCEETTEEGGGCCHHHHTT-CCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCC----------
T ss_pred             CCC--cccccCCCCcccCHHHHcC-CCCCchhhhhhHhHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCC----------
Confidence            432  3355689999999999987 678999999999999999999999999888877777665432111          


Q ss_pred             CccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCC
Q 035861          248 LPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHE  311 (332)
Q Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~  311 (332)
                                                 ++.+|+++++||.+||+.||++|||++|+|+||||+.
T Consensus       224 ---------------------------p~~~s~~~~~li~~~L~~dp~~R~t~~eil~hp~~~~  260 (263)
T d2j4za1         224 ---------------------------PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA  260 (263)
T ss_dssp             ---------------------------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTCHHHHH
T ss_pred             ---------------------------CccCCHHHHHHHHHHccCCHhHCcCHHHHHcCcCcCC
Confidence                                       1237899999999999999999999999999999975


No 2  
>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.8e-61  Score=419.48  Aligned_cols=277  Identities=27%  Similarity=0.440  Sum_probs=234.9

Q ss_pred             chhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcC
Q 035861            9 SVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDD   88 (332)
Q Consensus         9 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~   88 (332)
                      .+++|++++.||+|+||+||+|++..+|+.||||++.+.......     ....+.+|+.++++++||||+++++.+. +
T Consensus         3 ~l~dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~-----~~~~~~~E~~il~~l~hp~Iv~l~~~~~-~   76 (337)
T d1o6la_           3 TMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKD-----EVAHTVTESRVLQNTRHPFLTALKYAFQ-T   76 (337)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTT-----CHHHHHHHHHHHHSCCCTTBCCEEEEEE-C
T ss_pred             chHhcEEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHH-----HHHHHHHHHHHHHhCCCCCEEEEEeeec-c
Confidence            578999999999999999999999999999999999865322211     1124678999999999999999999995 4


Q ss_pred             CCeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccC
Q 035861           89 HDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYG  168 (332)
Q Consensus        89 ~~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~  168 (332)
                      ...+|+||||++|+.+.......+.+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||+++...
T Consensus        77 ~~~~~iv~ey~~gg~L~~~~~~~~~~~e~~~~~~~~qil~al~ylH~~~iiHRDlKP~NILl~~~g~vkl~DFG~a~~~~  156 (337)
T d1o6la_          77 HDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGI  156 (337)
T ss_dssp             SSEEEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSC
T ss_pred             ccccccceeccCCCchhhhhhcccCCcHHHHHHHHHHHhhhhhhhhhcCccccccCHHHeEecCCCCEEEeecccccccc
Confidence            48899999999976555555557889999999999999999999999999999999999999999999999999998765


Q ss_pred             CCCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCC
Q 035861          169 SPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSEL  248 (332)
Q Consensus       169 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (332)
                      .........+||+.|+|||++.+ ..++.++|+|||||++|+|++|..||.+.+..+....+.......           
T Consensus       157 ~~~~~~~~~~GT~~Y~aPE~~~~-~~y~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~i~~~~~~~-----------  224 (337)
T d1o6la_         157 SDGATMKTFCGTPEYLAPEVLED-NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRF-----------  224 (337)
T ss_dssp             CTTCCBCCCEECGGGCCGGGGSS-SCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCC-----------
T ss_pred             cCCcccccceeCHHHhhhhhccC-CCCChhhcccchhhHHHHHHHCCCCCCCcCHHHHHHHHhcCCCCC-----------
Confidence            55555667789999999999987 678999999999999999999999999998887777766542221           


Q ss_pred             ccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCC-----HHHHhcCCCCCCCCCCCC--CCCC
Q 035861          249 PGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRIT-----VDDALNHYWFHEVPLPKS--KDFM  321 (332)
Q Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps-----~~ell~hp~f~~~~~~~~--~~~~  321 (332)
                                                ++.+|+++++||.+||++||.+|++     ++|+++||||++++|...  +...
T Consensus       225 --------------------------p~~~s~~~~dli~~~L~~dP~~R~~~~~~~~~eil~Hp~f~~i~~~~l~~~~~~  278 (337)
T d1o6la_         225 --------------------------PRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLL  278 (337)
T ss_dssp             --------------------------CTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTTCCHHHHHTTCSC
T ss_pred             --------------------------CccCCHHHHHHHHhhccCCchhhcccccccHHHHHcCcccccCCHHHHHhCCCC
Confidence                                      2237999999999999999999994     999999999999887655  3345


Q ss_pred             CCCCCccc
Q 035861          322 PTFPPQHA  329 (332)
Q Consensus       322 ~~~~~~~~  329 (332)
                      +++.|+..
T Consensus       279 ~p~~P~~~  286 (337)
T d1o6la_         279 PPFKPQVT  286 (337)
T ss_dssp             CSCCCCCS
T ss_pred             CCCCCCCC
Confidence            66666543


No 3  
>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=9.8e-62  Score=412.81  Aligned_cols=270  Identities=25%  Similarity=0.371  Sum_probs=225.0

Q ss_pred             cchhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEc
Q 035861            8 RSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMD   87 (332)
Q Consensus         8 ~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~   87 (332)
                      ...++|++++.||+|+||+||+|++..+++.||||++.........     ....+.+|+.++++++||||+++++++. 
T Consensus         5 ~~p~dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~-----~~~~~~~E~~il~~l~HpnIv~l~~~~~-   78 (288)
T d1uu3a_           5 KRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKEN-----KVPYVTRERDVMSRLDHPFFVKLYFTFQ-   78 (288)
T ss_dssp             CCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTT-----CHHHHHHHHHHHHHCCSTTBCCEEEEEE-
T ss_pred             CCCCCCEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHH-----HHHHHHHHHHHHHHcCCCCeeEEEEEEE-
Confidence            3457899999999999999999999999999999999754322211     1125679999999999999999999994 


Q ss_pred             CCCeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeeccccccc
Q 035861           88 DHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQY  167 (332)
Q Consensus        88 ~~~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~  167 (332)
                      ++...|+||||++|+.+.......+.+++..++.++.|++.||+|||++||+||||||+||+++.++.+||+|||++...
T Consensus        79 ~~~~~~ivmEy~~gg~L~~~~~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~NIll~~~~~vkl~DFG~a~~~  158 (288)
T d1uu3a_          79 DDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL  158 (288)
T ss_dssp             CSSEEEEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred             ECCEEEEEEEccCCCCHHHhhhccCCCCHHHHHHHHHHHHHHHHhhccccEEcCcCCccccccCCCceEEecccccceec
Confidence            44889999999997544444444678999999999999999999999999999999999999999999999999999876


Q ss_pred             CCC--CCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCC
Q 035861          168 GSP--LKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGL  245 (332)
Q Consensus       168 ~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (332)
                      ...  ........||+.|+|||++.+ ..++.++||||||+++|+|++|..||...+..+...++.+.....        
T Consensus       159 ~~~~~~~~~~~~~GT~~Y~APE~~~~-~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~~--------  229 (288)
T d1uu3a_         159 SPESKQARANSFVGTAQYVSPELLTE-KSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF--------  229 (288)
T ss_dssp             C----------CCCCGGGCCHHHHHT-CCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTTCCCC--------
T ss_pred             ccCCcccccccccCCccccCceeecc-CCCCcccceehhhHHHHHHhhCCCCCCCcCHHHHHHHHHcCCCCC--------
Confidence            432  222345679999999999987 678999999999999999999999999988888777775432111        


Q ss_pred             CCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHH------HhcCCCCCCCCCCCCCC
Q 035861          246 SELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDD------ALNHYWFHEVPLPKSKD  319 (332)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e------ll~hp~f~~~~~~~~~~  319 (332)
                                                   +..+++++++||.+||+.||++|||++|      +++||||++++|....+
T Consensus       230 -----------------------------p~~~s~~~~~li~~~L~~dP~~R~t~~e~~~~~~i~~Hpff~~i~w~~l~~  280 (288)
T d1uu3a_         230 -----------------------------PEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQ  280 (288)
T ss_dssp             -----------------------------CTTCCHHHHHHHHTTSCSSGGGSTTSGGGTCHHHHHTSGGGTTCCCTTGGG
T ss_pred             -----------------------------CccCCHHHHHHHHHHccCCHhHCcCHHHHcCCHHHHcCCccCCCCHHHhhc
Confidence                                         1237899999999999999999999988      58999999999988876


Q ss_pred             CC
Q 035861          320 FM  321 (332)
Q Consensus       320 ~~  321 (332)
                      ..
T Consensus       281 ~~  282 (288)
T d1uu3a_         281 QT  282 (288)
T ss_dssp             SC
T ss_pred             CC
Confidence            53


No 4  
>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=5e-61  Score=409.13  Aligned_cols=256  Identities=27%  Similarity=0.449  Sum_probs=220.8

Q ss_pred             hcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCC
Q 035861           11 FEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHD   90 (332)
Q Consensus        11 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   90 (332)
                      .+|++++.||+|+||+||+|++..+|+.||||++........        ..+.+|+.++++++||||+++++++.++ .
T Consensus        20 ~~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~~~--------~~~~~E~~il~~l~HpnIv~~~~~~~~~-~   90 (293)
T d1yhwa1          20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKK--------ELIINEILVMRENKNPNIVNYLDSYLVG-D   90 (293)
T ss_dssp             TTBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCSCH--------HHHHHHHHHHHHCCCTTBCCEEEEEEET-T
T ss_pred             cccEEEEEEecCcCcEEEEEEECCCCCEEEEEEEecccChHH--------HHHHHHHHHHHhCCCCCEeeEeEEEEEC-C
Confidence            479999999999999999999999999999999976543221        2467999999999999999999999555 7


Q ss_pred             eEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCCC
Q 035861           91 SVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSP  170 (332)
Q Consensus        91 ~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~~  170 (332)
                      .+|+||||++|+.+..+.. .+.+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||++......
T Consensus        91 ~~~ivmEy~~gg~L~~~~~-~~~l~~~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~~~~vkl~DFG~a~~~~~~  169 (293)
T d1yhwa1          91 ELWVVMEYLAGGSLTDVVT-ETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE  169 (293)
T ss_dssp             EEEEEEECCTTCBHHHHHH-HSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCST
T ss_pred             EEEEEEEecCCCcHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCcHHHeEECCCCcEeeccchhheeeccc
Confidence            8999999999755555544 357999999999999999999999999999999999999999999999999999887655


Q ss_pred             CCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCCcc
Q 035861          171 LKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPG  250 (332)
Q Consensus       171 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (332)
                      ........||+.|+|||++.+ ..++.++||||||+++|+|++|..||.+.+..+....+........            
T Consensus       170 ~~~~~~~~gt~~Y~aPE~~~~-~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~~~~~~~------------  236 (293)
T d1yhwa1         170 QSKRSTMVGTPYWMAPEVVTR-KAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPEL------------  236 (293)
T ss_dssp             TCCBCCCCSCGGGCCHHHHSS-SCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCSCCC------------
T ss_pred             cccccccccCCCccChhhhcC-CCCCchhceehHhHHHHHHhhCCCCCCCCCHHHHHHHHHhCCCCCC------------
Confidence            555667789999999999987 6789999999999999999999999998888777766655432111            


Q ss_pred             ccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCC
Q 035861          251 AKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHE  311 (332)
Q Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~  311 (332)
                                            ..++.+|+++++||.+||+.||++|||++|+|+||||+.
T Consensus       237 ----------------------~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~Hp~~~~  275 (293)
T d1yhwa1         237 ----------------------QNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKI  275 (293)
T ss_dssp             ----------------------SSGGGSCHHHHHHHHHHTCSSTTTSCCHHHHTTCGGGGG
T ss_pred             ----------------------CCcccCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhCC
Confidence                                  112237899999999999999999999999999999975


No 5  
>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.9e-61  Score=407.45  Aligned_cols=261  Identities=27%  Similarity=0.399  Sum_probs=212.7

Q ss_pred             chhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcC
Q 035861            9 SVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDD   88 (332)
Q Consensus         9 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~   88 (332)
                      .+++|++++.||+|+||+||+|++..+++.||||++........       ...+.+|+.++++++||||+++++++.++
T Consensus         3 f~~dy~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~-------~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~   75 (271)
T d1nvra_           3 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDC-------PENIKKEICINKMLNHENVVKFYGHRREG   75 (271)
T ss_dssp             TTTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC--------------CHHHHHHHHHTCCCTTBCCEEEEEEET
T ss_pred             CCcceEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchH-------HHHHHHHHHHHHhCCCCCEeeEeeeeccC
Confidence            46799999999999999999999999999999999976432211       12577999999999999999999999554


Q ss_pred             CCeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccC
Q 035861           89 HDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYG  168 (332)
Q Consensus        89 ~~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~  168 (332)
                       ...|+||||++|+.+......++.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+|....
T Consensus        76 -~~~~ivmEy~~gg~L~~~l~~~~~l~e~~~~~i~~qi~~al~ylH~~~IiHrDiKp~NILl~~~~~~KL~DFG~a~~~~  154 (271)
T d1nvra_          76 -NIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFR  154 (271)
T ss_dssp             -TEEEEEEECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECE
T ss_pred             -ceeEEEEeccCCCcHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHcCCccCcccHHHEEECCCCCEEEccchhheeec
Confidence             8899999999974444344446789999999999999999999999999999999999999999999999999998653


Q ss_pred             CC--CCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCC
Q 035861          169 SP--LKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLS  246 (332)
Q Consensus       169 ~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (332)
                      ..  ........||+.|+|||++.+...++.++||||||+++|+|++|..||...................         
T Consensus       155 ~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~~~~~~~~~---------  225 (271)
T d1nvra_         155 YNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY---------  225 (271)
T ss_dssp             ETTEECCBCCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTSHHHHHHHTTCTT---------
T ss_pred             cCCccccccceeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCC---------
Confidence            22  2234556899999999999875556788999999999999999999997765433322222211111         


Q ss_pred             CCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCC
Q 035861          247 ELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHE  311 (332)
Q Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~  311 (332)
                                               ....+.+|+++++||.+||+.||++|||++|+|+||||++
T Consensus       226 -------------------------~~~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~hpwf~~  265 (271)
T d1nvra_         226 -------------------------LNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNK  265 (271)
T ss_dssp             -------------------------STTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTC
T ss_pred             -------------------------CCccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhCc
Confidence                                     1112337899999999999999999999999999999975


No 6  
>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=3.6e-60  Score=407.46  Aligned_cols=294  Identities=40%  Similarity=0.767  Sum_probs=239.7

Q ss_pred             ccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCCeEEE
Q 035861           15 KLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHDSVYM   94 (332)
Q Consensus        15 ~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~l   94 (332)
                      .++.||+|+||+||+|++..+|+.||||++........   .......+.+|+.++++++||||+++++++ .++...|+
T Consensus         2 ~l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~---~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~-~~~~~~~i   77 (299)
T d1ua2a_           2 KLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEA---KDGINRTALREIKLLQELSHPNIIGLLDAF-GHKSNISL   77 (299)
T ss_dssp             EEEEEEEETTEEEEEEECSSCCSEEEEEEC---------------CTHHHHHHHHHHHCCCTTBCCEEEEE-CCTTCCEE
T ss_pred             cceEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhh---hHHHHHHHHHHHHHHHhCCCCCEeEEEeee-ccCCceee
Confidence            56889999999999999999999999999976543221   112234678999999999999999999999 44578999


Q ss_pred             EcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCCCCCCC
Q 035861           95 VMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPY  174 (332)
Q Consensus        95 v~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~~~~~~  174 (332)
                      ||||+.|+++..+...+..+++..+..++.||+.||+|||++||+||||||+||+++.++.+||+|||.+..........
T Consensus        78 vmE~~~~~~~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~iiHrDiKp~NIli~~~~~~KL~DFG~a~~~~~~~~~~  157 (299)
T d1ua2a_          78 VFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAY  157 (299)
T ss_dssp             EEECCSEEHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCCCCC
T ss_pred             hhhhhcchHHhhhhhcccCCCHHHHHHHHHHHHHHHHHhhccceecccCCcceEEecCCCccccccCccccccCCCcccc
Confidence            99999999888888778889999999999999999999999999999999999999999999999999998776655556


Q ss_pred             ccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCCcccccc
Q 035861          175 TSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGAKAN  254 (332)
Q Consensus       175 ~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (332)
                      ....||+.|+|||++.....++.++||||||+++|+|++|..||.+.+..+...++.+..+.+....++...........
T Consensus       158 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~  237 (299)
T d1ua2a_         158 THQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTF  237 (299)
T ss_dssp             CCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCC
T ss_pred             cceecChhhccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCCCCCCHHHHHHHHHHhcCCCChhhccchhccchhhhh
Confidence            66789999999999987677899999999999999999999999999999999999998888877766655443322211


Q ss_pred             ccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCCCCCCCCCC
Q 035861          255 FAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVPLPKSKDFM  321 (332)
Q Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~~~~~~~  321 (332)
                      ... ........        .+.+++++++||.+||+.||++|||++|+|+||||++.+.+.....+
T Consensus       238 ~~~-~~~~~~~~--------~~~~s~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f~~~p~p~~~~~~  295 (299)
T d1ua2a_         238 KSF-PGIPLHHI--------FSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRPGPTPGCQL  295 (299)
T ss_dssp             CCC-CCCCHHHH--------CTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSGGGTSSSCCCCSSSS
T ss_pred             ccC-CCCChHHh--------cccCCHHHHHHHHHHccCChhhCcCHHHHhCCHhhCCCCCCCCCCCC
Confidence            111 10111111        23478999999999999999999999999999999988766554433


No 7  
>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00  E-value=1e-60  Score=412.12  Aligned_cols=273  Identities=28%  Similarity=0.451  Sum_probs=233.2

Q ss_pred             chhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcC
Q 035861            9 SVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDD   88 (332)
Q Consensus         9 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~   88 (332)
                      ++++|++++.||+|+||+||+|+++.+|+.||||++.........     ....+.+|+.++++++||||+++++++.+ 
T Consensus         2 sl~dy~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~-----~~~~~~~E~~il~~l~HpnIv~~~~~~~~-   75 (316)
T d1fota_           2 SLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLK-----QVEHTNDERLMLSIVTHPFIIRMWGTFQD-   75 (316)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTT-----CHHHHHHHHHHHHSCCBTTBCCEEEEEEC-
T ss_pred             chhHeEEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHH-----HHHHHHHHHHHHHhccCcChhheeeeEee-
Confidence            578999999999999999999999999999999999754322111     12256789999999999999999999954 


Q ss_pred             CCeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccC
Q 035861           89 HDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYG  168 (332)
Q Consensus        89 ~~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~  168 (332)
                      ....|+||||++|+.+..+......+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||++....
T Consensus        76 ~~~~~ivmE~~~gg~l~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NILl~~~g~vkL~DFG~a~~~~  155 (316)
T d1fota_          76 AQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVP  155 (316)
T ss_dssp             SSEEEEEECCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTSCEEECCCSSCEECS
T ss_pred             CCeeeeEeeecCCccccccccccccccccHHHHHHHHHHHhhhhhccCcEEccccCchheeEcCCCCEEEecCccceEec
Confidence            48899999999987777677778889999999999999999999999999999999999999999999999999998764


Q ss_pred             CCCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCC
Q 035861          169 SPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSEL  248 (332)
Q Consensus       169 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (332)
                      ..   .....||+.|+|||++.+ ..++.++||||||+++|+|++|..||.+.+..+...++.......           
T Consensus       156 ~~---~~~~~Gt~~Y~APE~l~~-~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~~-----------  220 (316)
T d1fota_         156 DV---TYTLCGTPDYIAPEVVST-KPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRF-----------  220 (316)
T ss_dssp             SC---BCCCCSCTTTCCHHHHTT-CCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHCCCCC-----------
T ss_pred             cc---cccccCcccccCHHHHcC-CCCCchhhccccchhHHHHHhCCCCCCCcCHHHHHHHHHcCCCCC-----------
Confidence            32   345689999999999987 678999999999999999999999999998888887776543221           


Q ss_pred             ccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCC-----CHHHHhcCCCCCCCCCCCC--CCCC
Q 035861          249 PGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRI-----TVDDALNHYWFHEVPLPKS--KDFM  321 (332)
Q Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp-----s~~ell~hp~f~~~~~~~~--~~~~  321 (332)
                                                ++.++++++++|.+||..||.+|+     |++++++||||+++.|...  ++..
T Consensus       221 --------------------------p~~~s~~~~~li~~~L~~dp~~R~~~~r~t~~~il~Hp~f~~i~~~~l~~~~~~  274 (316)
T d1fota_         221 --------------------------PPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKEVVWEKLLSRNIE  274 (316)
T ss_dssp             --------------------------CTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTSGGGSSCCHHHHHTTCSC
T ss_pred             --------------------------CCCCCHHHHHHHHHHhhhCHHhccccchhhHHHHHcCcccccCCHHHHHhCCCC
Confidence                                      123789999999999999999996     9999999999999987754  3445


Q ss_pred             CCCCCcc
Q 035861          322 PTFPPQH  328 (332)
Q Consensus       322 ~~~~~~~  328 (332)
                      +++.|+.
T Consensus       275 ~p~~p~~  281 (316)
T d1fota_         275 TPYEPPI  281 (316)
T ss_dssp             CSCCCCC
T ss_pred             cCCCCCc
Confidence            5566543


No 8  
>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=9e-60  Score=404.42  Aligned_cols=291  Identities=46%  Similarity=0.900  Sum_probs=241.1

Q ss_pred             hhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCC
Q 035861           10 VFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDH   89 (332)
Q Consensus        10 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~   89 (332)
                      +++|++++.||+|+||+||+|++..+++.||||++.......      .....+.+|+.++++++||||+++++.+.++ 
T Consensus         1 ~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~------~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~-   73 (298)
T d1gz8a_           1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE------GVPSTAIREISLLKELNHPNIVKLLDVIHTE-   73 (298)
T ss_dssp             CTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC-------------CCHHHHHHHHHHTTCCCTTBCCEEEEEEET-
T ss_pred             CCCCEeccEEecCcCeEEEEEEECCCCCEEEEEEEehhhcCh------HHHHHHHHHHHHHHhCCCCcEEEeccccccc-
Confidence            468999999999999999999999999999999996543221      1123577999999999999999999999554 


Q ss_pred             CeEEEEcccccccHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccC
Q 035861           90 DSVYMVMEYMEHDLKWLMESM-KQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYG  168 (332)
Q Consensus        90 ~~~~lv~e~~~~~l~~~~~~~-~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~  168 (332)
                      ...|+||||++|++...+... ...+++..++.++.||+.||+|||++||+||||||+||+++.++.+||+|||.+....
T Consensus        74 ~~~~iv~e~~~~~~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH~~~IiHrDiKpeNIl~~~~~~~kl~DFG~a~~~~  153 (298)
T d1gz8a_          74 NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG  153 (298)
T ss_dssp             TEEEEEEECCSEEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSTTHHHHHC
T ss_pred             cceeEEEeecCCchhhhhhhhcccCCCHHHHHHHHHHHHHHHHHhhcCCEEccccCchheeecccCcceeccCCcceecc
Confidence            889999999999877766543 5679999999999999999999999999999999999999999999999999998876


Q ss_pred             CCCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCC
Q 035861          169 SPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSEL  248 (332)
Q Consensus       169 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (332)
                      ..........|++.|+|||.+.....++.++|+||||+++|+|++|+.||...+..+...++.+..+.+.+..++.....
T Consensus       154 ~~~~~~~~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  233 (298)
T d1gz8a_         154 VPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM  233 (298)
T ss_dssp             CCSBCTTCCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGS
T ss_pred             CCcccceeecccceeeehhhhccccCCCccccccccchhhhHHhhCCCCCCCCCHHHHHHHHHHhcCCCchhhccccccc
Confidence            65566667789999999999887677899999999999999999999999999988888888888887777766654443


Q ss_pred             ccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCCCC
Q 035861          249 PGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVPLP  315 (332)
Q Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~  315 (332)
                      +.................        .+.+|.++++||++||+.||++|||++|+|+||||++++.|
T Consensus       234 ~~~~~~~~~~~~~~~~~~--------~~~~s~~~~dll~~mL~~dP~~R~t~~ell~H~ff~~~~~p  292 (298)
T d1gz8a_         234 PDYKPSFPKWARQDFSKV--------VPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP  292 (298)
T ss_dssp             TTCCTTSCCCCCCCHHHH--------STTCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTCCCC
T ss_pred             cccccccccccccchhhh--------ccCCCHHHHHHHHHHccCChhHCcCHHHHhCCHhhccCCCC
Confidence            333222222111111111        23478999999999999999999999999999999998665


No 9  
>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=4.1e-60  Score=403.04  Aligned_cols=258  Identities=26%  Similarity=0.466  Sum_probs=217.1

Q ss_pred             hcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCC
Q 035861           11 FEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHD   90 (332)
Q Consensus        11 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   90 (332)
                      +.|++++.||+|+||+||+|++..+++.||||++.......        ...+.+|+.++++++||||+++++++.++ .
T Consensus        12 d~Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~--------~~~~~~E~~il~~l~HpnIv~l~~~~~~~-~   82 (288)
T d2jfla1          12 DFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEE--------LEDYMVEIDILASCDHPNIVKLLDAFYYE-N   82 (288)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSSSGG--------GGGTHHHHHHHHHCCCTTBCCEEEEEEET-T
T ss_pred             cCeEEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcCCHHH--------HHHHHHHHHHHHhCCCCCCCeEEEEEeeC-C
Confidence            36899999999999999999999999999999997543221        12567999999999999999999999554 7


Q ss_pred             eEEEEccccccc-HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCC
Q 035861           91 SVYMVMEYMEHD-LKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGS  169 (332)
Q Consensus        91 ~~~lv~e~~~~~-l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~  169 (332)
                      ..++||||++|+ +.+.+....+++++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++.....
T Consensus        83 ~~~lvmEy~~~g~L~~~~~~~~~~l~e~~~~~i~~qi~~gL~ylH~~~ivHrDiKp~NIll~~~~~~Kl~DFG~a~~~~~  162 (288)
T d2jfla1          83 NLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTR  162 (288)
T ss_dssp             EEEEEEECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECHH
T ss_pred             eEEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEeecChhheeECCCCCEEEEechhhhccCC
Confidence            899999999865 4455555567899999999999999999999999999999999999999999999999999876533


Q ss_pred             CCCCCccccccccccchhhhcC----CCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCC
Q 035861          170 PLKPYTSLVVTLWYRAPELLLG----AKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGL  245 (332)
Q Consensus       170 ~~~~~~~~~~~~~y~aPE~~~~----~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (332)
                      .........||+.|+|||++..    ...++.++||||||+++|+|++|..||...+..+...++........       
T Consensus       163 ~~~~~~~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~~~~~~~i~~~~~~~~-------  235 (288)
T d2jfla1         163 TIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTL-------  235 (288)
T ss_dssp             HHHHHTCCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHHSCCCCC-------
T ss_pred             CcccccccccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCC-------
Confidence            2223345679999999999852    35678999999999999999999999998888777777665422111       


Q ss_pred             CCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCC
Q 035861          246 SELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHE  311 (332)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~  311 (332)
                                                 ..++.+|+++++||.+||+.||++|||++|+|+||||+.
T Consensus       236 ---------------------------~~~~~~s~~~~~li~~~L~~dp~~R~t~~ell~hp~~~~  274 (288)
T d2jfla1         236 ---------------------------AQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTV  274 (288)
T ss_dssp             ---------------------------SSGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTSGGGCC
T ss_pred             ---------------------------CccccCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCC
Confidence                                       112237899999999999999999999999999999975


No 10 
>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}
Probab=100.00  E-value=7.6e-60  Score=411.70  Aligned_cols=272  Identities=25%  Similarity=0.399  Sum_probs=229.6

Q ss_pred             cccchhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeE
Q 035861            6 GCRSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVV   85 (332)
Q Consensus         6 ~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~   85 (332)
                      ....+++|++++.||+|+||+||+|++..+|+.||||++.......        ...+.+|+.++++++||||+++++++
T Consensus        21 ~~~il~~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~~~~--------~~~~~~E~~il~~l~HpnIv~~~~~~   92 (350)
T d1koaa2          21 HDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESD--------KETVRKEIQTMSVLRHPTLVNLHDAF   92 (350)
T ss_dssp             CSCGGGTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCSHHH--------HHHHHHHHHHHHHTCCTTBCCEEEEE
T ss_pred             CCCCccCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEcccchhh--------HHHHHHHHHHHHhCCCCCCCcEEEEE
Confidence            3456789999999999999999999999999999999996543211        12467899999999999999999999


Q ss_pred             EcCCCeEEEEcccccc-cHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcC--CCcEEEeecc
Q 035861           86 MDDHDSVYMVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNN--QGVLKICDFG  162 (332)
Q Consensus        86 ~~~~~~~~lv~e~~~~-~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~--~~~~~l~df~  162 (332)
                      .+ +...|+||||++| ++.+.+....+.+++..++.++.||+.||+|||++||+||||||+|||++.  ++.+||+|||
T Consensus        93 ~~-~~~~~ivmE~~~gg~L~~~l~~~~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHrDiKp~NIll~~~~~~~vkL~DFG  171 (350)
T d1koaa2          93 ED-DNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFG  171 (350)
T ss_dssp             EE-TTEEEEEECCCCSCBHHHHHTCTTSCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTSCCEEECCCT
T ss_pred             EE-CCEEEEEEEcCCCCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCeeeeechhHeeeccCCCCeEEEeecc
Confidence            54 4889999999986 566666565678999999999999999999999999999999999999964  5789999999


Q ss_pred             cccccCCCCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcc
Q 035861          163 MSRQYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIW  242 (332)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~  242 (332)
                      ++...... .......||+.|+|||++.+ ..++.++||||||+++|+|++|..||.+.+..+....+.......+... 
T Consensus       172 ~a~~~~~~-~~~~~~~gT~~Y~aPEv~~~-~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~-  248 (350)
T d1koaa2         172 LTAHLDPK-QSVKVTTGTAEFAAPEVAEG-KPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSA-  248 (350)
T ss_dssp             TCEECCTT-SCEEEECSCTTTCCHHHHHT-CCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCSCCGG-
T ss_pred             hheecccc-cccceecCcccccCHHHHcC-CCCChhHhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCccc-
Confidence            99876433 33455688999999999987 6789999999999999999999999999888888887776543322221 


Q ss_pred             cCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCCCCCCCCCC
Q 035861          243 PGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVPLPKSKDFM  321 (332)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~~~~~~~  321 (332)
                                                      .+.+|+++++||.+||+.||++|||++|+|+||||+..+++......
T Consensus       249 --------------------------------~~~~s~~~~~li~~~L~~dP~~R~t~~eil~hp~~~~~~~~~~~~~~  295 (350)
T d1koaa2         249 --------------------------------FSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNAPGRDSQI  295 (350)
T ss_dssp             --------------------------------GGGCCHHHHHHHHHHCCSSGGGSCCHHHHHHSTTTSCTTCCSCCCCB
T ss_pred             --------------------------------ccCCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCCCCCCCchhhC
Confidence                                            12278999999999999999999999999999999998876654433


No 11 
>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=6.4e-60  Score=398.22  Aligned_cols=257  Identities=28%  Similarity=0.438  Sum_probs=205.7

Q ss_pred             hhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcC-
Q 035861           10 VFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDD-   88 (332)
Q Consensus        10 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-   88 (332)
                      .++|++++.||+|+||+||+|++..+|+.||||++.........      ...+.+|+.++++++||||+++++++.+. 
T Consensus         3 ~edy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~------~~~~~~E~~il~~l~HpnIv~~~~~~~~~~   76 (269)
T d2java1           3 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAE------KQMLVSEVNLLRELKHPNIVRYYDRIIDRT   76 (269)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCHHH------HHHHHHHHHHTTSCCCTTBCCEEEEEEC--
T ss_pred             chhCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhCCHHH------HHHHHHHHHHHHHCCCCCEeeEEEEEEeCC
Confidence            57999999999999999999999999999999999765433221      12467899999999999999999998643 


Q ss_pred             CCeEEEEcccccc-cHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHCC-----cccccCCCCCEEEcCCCcEEEe
Q 035861           89 HDSVYMVMEYMEH-DLKWLMES---MKQPFSTSEVKCLMLQLLEGVKYLHDNW-----VLHRDLKTSNLLLNNQGVLKIC  159 (332)
Q Consensus        89 ~~~~~lv~e~~~~-~l~~~~~~---~~~~l~~~~~~~i~~~l~~~L~~lh~~~-----i~H~di~p~Nili~~~~~~~l~  159 (332)
                      ....|+|||||+| ++.+.+..   .+..+++..++.++.||+.||+|||+.|     |+||||||+|||++.++.+||+
T Consensus        77 ~~~~~ivmEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~~vkl~  156 (269)
T d2java1          77 NTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLG  156 (269)
T ss_dssp             --CEEEEEECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEECTTSCEEEC
T ss_pred             CCEEEEEEecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCCCCcEEEe
Confidence            4568999999986 55554432   3567999999999999999999999876     9999999999999999999999


Q ss_pred             ecccccccCCCCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCC
Q 035861          160 DFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTE  239 (332)
Q Consensus       160 df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~  239 (332)
                      |||++..............||+.|+|||++.+ ..++.++||||||+++|+|+||..||...+..+....+.......  
T Consensus       157 DFG~a~~~~~~~~~~~~~~gt~~Y~APE~l~~-~~~~~~~DIwSlGvilyel~tg~~Pf~~~~~~~~~~~i~~~~~~~--  233 (269)
T d2java1         157 DFGLARILNHDTSFAKAFVGTPYYMSPEQMNR-MSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRR--  233 (269)
T ss_dssp             CHHHHHHC-----------CCCSCCCHHHHTT-CCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCC--
T ss_pred             eccceeecccCCCccccCCCCcccCCHHHHcC-CCCChHHHHHhhCHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCC--
Confidence            99999887554444556789999999999977 678999999999999999999999999888877777665532111  


Q ss_pred             CcccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCC
Q 035861          240 TIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWF  309 (332)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f  309 (332)
                                                        .+..+|+++.+||.+||+.||.+|||++|+|+|||+
T Consensus       234 ----------------------------------~~~~~s~~l~~li~~~L~~dp~~Rps~~ell~hp~i  269 (269)
T d2java1         234 ----------------------------------IPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLI  269 (269)
T ss_dssp             ----------------------------------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTC
T ss_pred             ----------------------------------CCcccCHHHHHHHHHHcCCChhHCcCHHHHHhCCcC
Confidence                                              122378999999999999999999999999999995


No 12 
>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=100.00  E-value=1.5e-59  Score=403.27  Aligned_cols=257  Identities=28%  Similarity=0.477  Sum_probs=220.6

Q ss_pred             cccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCCe
Q 035861           12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHDS   91 (332)
Q Consensus        12 ~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   91 (332)
                      .|+.++.||+|+||+||+|++..+++.||||++...........     ..+.+|+.++++++||||+++++++.++ ..
T Consensus        16 ~y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~-----~~~~~Ei~il~~l~HpnIv~~~~~~~~~-~~   89 (309)
T d1u5ra_          16 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKW-----QDIIKEVRFLQKLRHPNTIQYRGCYLRE-HT   89 (309)
T ss_dssp             HEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHH-----HHHHHHHHHHTTCCCTTBCCEEEEEEET-TE
T ss_pred             hcEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHH-----HHHHHHHHHHHHCCCCCEeeEEEEEEEC-CE
Confidence            59999999999999999999999999999999976543332211     2467899999999999999999998555 88


Q ss_pred             EEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCCCC
Q 035861           92 VYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPL  171 (332)
Q Consensus        92 ~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~~~  171 (332)
                      .|+|||||.|++++.+....+.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++.....  
T Consensus        90 ~~iv~E~~~~g~l~~~~~~~~~l~e~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~~~~~Kl~DFG~a~~~~~--  167 (309)
T d1u5ra_          90 AWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP--  167 (309)
T ss_dssp             EEEEEECCSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSS--
T ss_pred             EEEEEEecCCCchHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEECCCCCEEEeecccccccCC--
Confidence            999999999988887777788999999999999999999999999999999999999999999999999999986533  


Q ss_pred             CCCccccccccccchhhhcC--CCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCCc
Q 035861          172 KPYTSLVVTLWYRAPELLLG--AKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELP  249 (332)
Q Consensus       172 ~~~~~~~~~~~y~aPE~~~~--~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (332)
                        .....||+.|+|||++.+  ...++.++||||||+++|+|++|..||.+.+..+....+........           
T Consensus       168 --~~~~~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~~~~~~~i~~~~~~~~-----------  234 (309)
T d1u5ra_         168 --ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPAL-----------  234 (309)
T ss_dssp             --BCCCCSCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCC-----------
T ss_pred             --CCccccCccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCC-----------
Confidence              245679999999999864  24588999999999999999999999998888777766655322111           


Q ss_pred             cccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCC
Q 035861          250 GAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVP  313 (332)
Q Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~  313 (332)
                                              .+..+|+++++||.+||+.||++|||++|+|+||||.+-.
T Consensus       235 ------------------------~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~Hp~~~~~~  274 (309)
T d1u5ra_         235 ------------------------QSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRER  274 (309)
T ss_dssp             ------------------------SCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTCHHHHSCC
T ss_pred             ------------------------CCCCCCHHHHHHHHHHCcCChhHCcCHHHHHhCHHhcCCC
Confidence                                    1223789999999999999999999999999999998643


No 13 
>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=100.00  E-value=2.8e-59  Score=401.47  Aligned_cols=259  Identities=30%  Similarity=0.443  Sum_probs=204.4

Q ss_pred             hhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCC
Q 035861           10 VFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDH   89 (332)
Q Consensus        10 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~   89 (332)
                      -+.|++++.||+|+||+||+|++..+++.||||++........       ...+.+|+.++++++||||+++++++. ++
T Consensus         8 ~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~-------~~~~~~Ei~il~~l~HpnIv~l~~~~~-~~   79 (307)
T d1a06a_           8 RDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGK-------EGSMENEIAVLHKIKHPNIVALDDIYE-SG   79 (307)
T ss_dssp             GGTEEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC-----------------CHHHHHHHTCCCTTBCCEEEEEE-CS
T ss_pred             ccceEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhhhH-------HHHHHHHHHHHHhCCCCCCCcEEEEEE-EC
Confidence            3469999999999999999999999999999999976543221       124568999999999999999999994 45


Q ss_pred             CeEEEEcccccc-cHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEc---CCCcEEEeeccccc
Q 035861           90 DSVYMVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLN---NQGVLKICDFGMSR  165 (332)
Q Consensus        90 ~~~~lv~e~~~~-~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~---~~~~~~l~df~~~~  165 (332)
                      ...|+|||||+| +|.+.+. ..+.+++..+..++.||+.||+|||++||+||||||+||++.   .++.+||+|||++.
T Consensus        80 ~~~~lvmE~~~gg~L~~~l~-~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~  158 (307)
T d1a06a_          80 GHLYLIMQLVSGGELFDRIV-EKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK  158 (307)
T ss_dssp             SEEEEEECCCCSCBHHHHHH-TCSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCC----
T ss_pred             CEEEEEEeccCCCcHHHhhh-cccCCCHHHHHHHHHHHHHHHHhhhhceeeeEEecccceeecccCCCceEEEeccceeE
Confidence            889999999996 5555554 477899999999999999999999999999999999999995   47899999999998


Q ss_pred             ccCCCCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCC
Q 035861          166 QYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGL  245 (332)
Q Consensus       166 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (332)
                      ..+.. .......||+.|+|||++.+ ..++.++||||||+++|+|++|..||.+.+..+....+.+.....+..     
T Consensus       159 ~~~~~-~~~~~~~GT~~y~APE~~~~-~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~~~~~-----  231 (307)
T d1a06a_         159 MEDPG-SVLSTACGTPGYVAPEVLAQ-KPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSP-----  231 (307)
T ss_dssp             ---------------CTTSCHHHHTT-CCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHTTCCCCCTT-----
T ss_pred             EccCC-CeeeeeeeCccccCcHHHcC-CCCCcHHHhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHhccCCCCCCc-----
Confidence            66432 33345679999999999987 678999999999999999999999999988888777776543222211     


Q ss_pred             CCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCC
Q 035861          246 SELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEV  312 (332)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~  312 (332)
                                                  ..+.+|+++++||.+||+.||++|||++|+|+||||++-
T Consensus       232 ----------------------------~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~hp~~~~~  270 (307)
T d1a06a_         232 ----------------------------YWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWIAGD  270 (307)
T ss_dssp             ----------------------------TTTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHSTTTTSS
T ss_pred             ----------------------------cccCCCHHHHHHHHHHccCCHhHCcCHHHHhcCHhhCCC
Confidence                                        223479999999999999999999999999999999863


No 14 
>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=4.9e-59  Score=398.69  Aligned_cols=271  Identities=25%  Similarity=0.386  Sum_probs=220.7

Q ss_pred             chhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcC
Q 035861            9 SVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDD   88 (332)
Q Consensus         9 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~   88 (332)
                      .-++|++++.||+|+||+||+|++..+|+.||||++.+.........  .....+.+|+.++++++||||+++++++ .+
T Consensus         8 i~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~--~~~~~~~~E~~il~~l~HpnIv~~~~~~-~~   84 (293)
T d1jksa_           8 VDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRG--VSREDIEREVSILKEIQHPNVITLHEVY-EN   84 (293)
T ss_dssp             GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSS--BCHHHHHHHHHHHHHCCCTTBCCEEEEE-EC
T ss_pred             cccCEEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhh--HHHHHHHHHHHHHHhCCCCCCCcEEEEE-EE
Confidence            34569999999999999999999999999999999986544322111  1123567899999999999999999999 45


Q ss_pred             CCeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCC----cEEEeecccc
Q 035861           89 HDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQG----VLKICDFGMS  164 (332)
Q Consensus        89 ~~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~----~~~l~df~~~  164 (332)
                      ....|+|||||+|+.+..+....+.+++..++.++.||+.||+|||++||+||||||+||+++.++    .+|++|||++
T Consensus        85 ~~~~~iv~E~~~gg~L~~~i~~~~~l~~~~~~~~~~qi~~al~yLH~~~ivHrDiKp~Nill~~~~~~~~~vkl~DfG~a  164 (293)
T d1jksa_          85 KTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA  164 (293)
T ss_dssp             SSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSSSSCCEEECCCTTC
T ss_pred             CCEEEEEEEcCCCccccchhccccccchhHHHHHHHHHHHHHHhhhhcceeecccccceEEEecCCCcccceEecchhhh
Confidence            588999999999754444444467899999999999999999999999999999999999998876    5999999999


Q ss_pred             cccCCCCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccC
Q 035861          165 RQYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPG  244 (332)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (332)
                      ...... .......|++.|+|||++.+ ..++.++||||||+++|+|++|..||.+.+..+....+.......+..    
T Consensus       165 ~~~~~~-~~~~~~~~t~~y~APE~~~~-~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~~~~~----  238 (293)
T d1jksa_         165 HKIDFG-NEFKNIFGTPEFVAPEIVNY-EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDE----  238 (293)
T ss_dssp             EECTTS-CBCSCCCCCGGGCCHHHHTT-CCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTTCCCCCHH----
T ss_pred             hhcCCC-ccccccCCCCcccCHHHHcC-CCCCCcccchhhhHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCCch----
Confidence            876432 33455678999999999987 678999999999999999999999999988888777765543222111    


Q ss_pred             CCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCCCCCC
Q 035861          245 LSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVPLPKS  317 (332)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~~~  317 (332)
                                                   ..+.+|+.+++||.+||+.||++|||++|+|+||||+..++...
T Consensus       239 -----------------------------~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~hp~~~~~~~~~~  282 (293)
T d1jksa_         239 -----------------------------YFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQA  282 (293)
T ss_dssp             -----------------------------HHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTTTCC------
T ss_pred             -----------------------------hcCCCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCCCChhHh
Confidence                                         11237899999999999999999999999999999998776554


No 15 
>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}
Probab=100.00  E-value=1.1e-58  Score=395.81  Aligned_cols=286  Identities=45%  Similarity=0.838  Sum_probs=235.5

Q ss_pred             hhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCC
Q 035861           10 VFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDH   89 (332)
Q Consensus        10 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~   89 (332)
                      +++|++++.||+|+||+||+|+++ +++.||||++.......      .....+.+|+.++++++||||+++++.+..+ 
T Consensus         1 ~~~Y~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~i~~~~~~~------~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~-   72 (286)
T d1ob3a_           1 MEKYHGLEKIGEGTYGVVYKAQNN-YGETFALKKIRLEKEDE------GIPSTTIREISILKELKHSNIVKLYDVIHTK-   72 (286)
T ss_dssp             CCSEEEEEEEEEETTEEEEEEEET-TSCEEEEEEECCSSGGG------CCCHHHHHHHHGGGGCCCTTBCCEEEEEECS-
T ss_pred             CCCceeccEEecCCCcEEEEEEeC-CCCEEEEEEEehhhcCh------HHHHHHHHHHHHHHhCCCCcEEeeeeecccC-
Confidence            468999999999999999999986 78999999996643221      1223678999999999999999999999554 


Q ss_pred             CeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCC
Q 035861           90 DSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGS  169 (332)
Q Consensus        90 ~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~  169 (332)
                      ...+++++++.++++..+....+.+++..+..++.||+.||+|||+.||+||||||+||+++.++.+|++|||.+.....
T Consensus        73 ~~~~i~~e~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~IvHrDiKp~NIll~~~~~~kl~DfG~a~~~~~  152 (286)
T d1ob3a_          73 KRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGI  152 (286)
T ss_dssp             SCEEEEEECCSEEHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC
T ss_pred             CceeEEEEeehhhhHHHHHhhcCCcchhhhHHHHHHHHHHHHHhccCcEEecCCCCceeeEcCCCCEEecccccceeccc
Confidence            78999999999999999988889999999999999999999999999999999999999999999999999999987765


Q ss_pred             CCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCCc
Q 035861          170 PLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELP  249 (332)
Q Consensus       170 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (332)
                      .........+++.|+|||.+.....++.++|+||||+++|+|++|+.||.+.+..+...++....+.+....++......
T Consensus       153 ~~~~~~~~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  232 (286)
T d1ob3a_         153 PVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELP  232 (286)
T ss_dssp             ---------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGST
T ss_pred             CccccceecccchhhhHHHHhCCCCCCcceeehhcCcHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCChhhccchhhhh
Confidence            54555566789999999999876778999999999999999999999999999999999998888888777666554433


Q ss_pred             cccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCC
Q 035861          250 GAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHE  311 (332)
Q Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~  311 (332)
                      ..........        +.......+.+++.+++||++||+.||++|||++|+|+||||++
T Consensus       233 ~~~~~~~~~~--------~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~ell~Hp~f~~  286 (286)
T d1ob3a_         233 KYDPNFTVYE--------PLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE  286 (286)
T ss_dssp             TCCTTCCCCC--------CCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGGC
T ss_pred             hccccccccc--------CcchhhhcccCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCc
Confidence            3222111111        11112223447899999999999999999999999999999985


No 16 
>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}
Probab=100.00  E-value=2.3e-59  Score=408.96  Aligned_cols=273  Identities=28%  Similarity=0.412  Sum_probs=229.0

Q ss_pred             cchhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEc
Q 035861            8 RSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMD   87 (332)
Q Consensus         8 ~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~   87 (332)
                      ..+++|++++.||+|+||+||+|+++.+|+.||||++..........     ...+.+|+.+++.++||||+++++.+..
T Consensus        38 ~~ld~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~-----~~~~~~E~~il~~l~hpnIv~~~~~~~~  112 (350)
T d1rdqe_          38 AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQ-----IEHTLNEKRILQAVNFPFLVKLEFSFKD  112 (350)
T ss_dssp             CCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTC-----HHHHHHHHHHHTTCCCTTBCCEEEEEEC
T ss_pred             CCccCeEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHH-----HHHHHHHHHHHHHcCCCcEeeccccccc
Confidence            34689999999999999999999999999999999997543222111     1246799999999999999999999954


Q ss_pred             CCCeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeeccccccc
Q 035861           88 DHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQY  167 (332)
Q Consensus        88 ~~~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~  167 (332)
                       ....++|||++.|+.+.......+.+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||+++..
T Consensus       113 -~~~~~~v~e~~~~g~l~~~l~~~~~l~e~~~~~i~~qi~~aL~yLH~~~iiHRDIKP~NILl~~~g~ikL~DFG~a~~~  191 (350)
T d1rdqe_         113 -NSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV  191 (350)
T ss_dssp             -SSEEEEEEECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred             -ccccccccccccccchhhhHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCcCCHHHcccCCCCCEEeeeceeeeec
Confidence             4889999999997655445455678999999999999999999999999999999999999999999999999999876


Q ss_pred             CCCCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCC
Q 035861          168 GSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSE  247 (332)
Q Consensus       168 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (332)
                      ...   .....||+.|+|||++.+ ..++.++|||||||++|+|+||..||.+.+......++.......+         
T Consensus       192 ~~~---~~~~~Gt~~Y~APE~~~~-~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~~p---------  258 (350)
T d1rdqe_         192 KGR---TWTLCGTPEALAPEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP---------  258 (350)
T ss_dssp             SSC---BCCCEECGGGCCHHHHTT-CCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC---------
T ss_pred             ccc---cccccCccccCCHHHHcC-CCCCccccccchhHHHHHHHhCCCCCCCcCHHHHHHHHhcCCCCCC---------
Confidence            532   345689999999999987 6789999999999999999999999999888887777765432221         


Q ss_pred             CccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCC-----CHHHHhcCCCCCCCCCCCCC--CC
Q 035861          248 LPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRI-----TVDDALNHYWFHEVPLPKSK--DF  320 (332)
Q Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp-----s~~ell~hp~f~~~~~~~~~--~~  320 (332)
                                                  +.+++++.+||++||+.||.+|+     +++++++||||++++|....  ..
T Consensus       259 ----------------------------~~~s~~~~~li~~~L~~dP~kR~~~~r~t~~ell~Hp~f~~~~~~~~~~~~~  310 (350)
T d1rdqe_         259 ----------------------------SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKV  310 (350)
T ss_dssp             ----------------------------TTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTSGGGTTCCHHHHHTTCS
T ss_pred             ----------------------------ccCCHHHHHHHHHHhhhCHHhccccccccHHHHHcCccccCCCHHHHHhcCC
Confidence                                        23799999999999999999995     99999999999998865442  23


Q ss_pred             CCCCCCc
Q 035861          321 MPTFPPQ  327 (332)
Q Consensus       321 ~~~~~~~  327 (332)
                      .+++.|.
T Consensus       311 ~~p~~p~  317 (350)
T d1rdqe_         311 EAPFIPK  317 (350)
T ss_dssp             CCSCCCC
T ss_pred             CcCccCC
Confidence            4445444


No 17 
>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}
Probab=100.00  E-value=6.6e-59  Score=406.06  Aligned_cols=263  Identities=24%  Similarity=0.409  Sum_probs=223.9

Q ss_pred             ccchhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEE
Q 035861            7 CRSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVM   86 (332)
Q Consensus         7 ~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~   86 (332)
                      +..+++|++++.||+|+||+||+|++..+|+.||||++........        ..+.+|+.++++++||||+++++++.
T Consensus        25 ~~~~d~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~--------~~~~~Ei~il~~l~HpnIv~~~~~~~   96 (352)
T d1koba_          25 GSVYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDK--------YTVKNEISIMNQLHHPKLINLHDAFE   96 (352)
T ss_dssp             SCGGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHH--------HHHHHHHHHHTTCCSTTBCCEEEEEE
T ss_pred             CCcccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCcchhHH--------HHHHHHHHHHHhCCCCCCCcEEEEEE
Confidence            3456789999999999999999999999999999999875432111        14668999999999999999999995


Q ss_pred             cCCCeEEEEcccccc-cHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEc--CCCcEEEeeccc
Q 035861           87 DDHDSVYMVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLN--NQGVLKICDFGM  163 (332)
Q Consensus        87 ~~~~~~~lv~e~~~~-~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~--~~~~~~l~df~~  163 (332)
                       ++..+|+|||||+| +|.+.+.....++++.+++.++.||+.||+|||++||+||||||+|||++  .++.+||+|||+
T Consensus        97 -~~~~~~ivmE~~~gg~L~~~~~~~~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHRDiKp~NILl~~~~~~~vkL~DFGl  175 (352)
T d1koba_          97 -DKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGL  175 (352)
T ss_dssp             -CSSEEEEEEECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTCCCEEECCCTT
T ss_pred             -ECCEEEEEEEcCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccccccccccccCCCeEEEeeccc
Confidence             45889999999996 45555555556799999999999999999999999999999999999998  568999999999


Q ss_pred             ccccCCCCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCccc
Q 035861          164 SRQYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWP  243 (332)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  243 (332)
                      +...... .......|++.|+|||++.+ ..++.++|||||||++|+|+||..||.+.+..+....+.......+...  
T Consensus       176 a~~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~--  251 (352)
T d1koba_         176 ATKLNPD-EIVKVTTATAEFAAPEIVDR-EPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDA--  251 (352)
T ss_dssp             CEECCTT-SCEEEECSSGGGCCHHHHTT-CCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCCCCCSST--
T ss_pred             ceecCCC-CceeeccCcccccCHHHHcC-CCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCccc--
Confidence            9876432 33455688999999999987 6789999999999999999999999999988888888776543333221  


Q ss_pred             CCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCC
Q 035861          244 GLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVP  313 (332)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~  313 (332)
                                                     .+.+|+++++||.+||+.||.+|||++|+|+||||+...
T Consensus       252 -------------------------------~~~~s~~~~~li~~~L~~dp~~R~s~~eil~Hp~~~~~~  290 (352)
T d1koba_         252 -------------------------------FSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPWLKGDH  290 (352)
T ss_dssp             -------------------------------TTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTSTTTSSCC
T ss_pred             -------------------------------ccCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhCCCc
Confidence                                           233799999999999999999999999999999998743


No 18 
>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.8e-59  Score=404.97  Aligned_cols=274  Identities=28%  Similarity=0.459  Sum_probs=224.1

Q ss_pred             hhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHh-hCCCCCeeeeeeeEEcC
Q 035861           10 VFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILL-SFDHPSIVNVKEVVMDD   88 (332)
Q Consensus        10 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~-~l~h~~i~~~~~~~~~~   88 (332)
                      +++|++++.||+|+||+||+|++..+++.||||++.+.........     ..+..|...+. .++||||+++++++.+ 
T Consensus         1 iddy~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~-----~~~~~e~~~l~~~~~hp~Iv~~~~~~~~-   74 (320)
T d1xjda_           1 IEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDV-----ECTMVEKRVLSLAWEHPFLTHMFCTFQT-   74 (320)
T ss_dssp             CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCH-----HHHHHHHHHHHHHTTCTTBCCEEEEEEC-
T ss_pred             CCCeEEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHH-----HHHHHHHHHHHHhCCCCcEEEEEEEEcc-
Confidence            4689999999999999999999999999999999976432111111     13446666654 6899999999999954 


Q ss_pred             CCeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccC
Q 035861           89 HDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYG  168 (332)
Q Consensus        89 ~~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~  168 (332)
                      +...|+||||++|+.+..+......+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||.+....
T Consensus        75 ~~~~yivmEy~~~g~L~~~i~~~~~~~e~~~~~~~~qi~~al~ylH~~~iiHrDikp~NiL~~~~~~~kl~DFG~a~~~~  154 (320)
T d1xjda_          75 KENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENM  154 (320)
T ss_dssp             SSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCC
T ss_pred             CCceeEEEeecCCCcHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCcccceeecCCCceeccccchhhhcc
Confidence            48899999999975544455557789999999999999999999999999999999999999999999999999998776


Q ss_pred             CCCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCC
Q 035861          169 SPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSEL  248 (332)
Q Consensus       169 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (332)
                      ..........||+.|+|||++.+ ..++.++|||||||++|+|++|..||.+.+..+....+.......           
T Consensus       155 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~~~-----------  222 (320)
T d1xjda_         155 LGDAKTNTFCGTPDYIAPEILLG-QKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFY-----------  222 (320)
T ss_dssp             CTTCCBCCCCSCGGGCCHHHHTT-CCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCC-----------
T ss_pred             cccccccccCCCCCcCCHHHHcC-CCCCchhhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCC-----------
Confidence            55556667789999999999987 678999999999999999999999999988888777765432211           


Q ss_pred             ccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHH-HHhcCCCCCCCCCCCC--CCCCCCCC
Q 035861          249 PGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVD-DALNHYWFHEVPLPKS--KDFMPTFP  325 (332)
Q Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~-ell~hp~f~~~~~~~~--~~~~~~~~  325 (332)
                                                ++.+|+++++||.+||+.||++||+++ ++++||||+++++...  ....+++.
T Consensus       223 --------------------------p~~~s~~~~dli~~~L~~dP~~R~s~~~~l~~hpff~~~~~~~l~~~~~~pp~~  276 (320)
T d1xjda_         223 --------------------------PRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFREINWEELERKEIDPPFR  276 (320)
T ss_dssp             --------------------------CTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGGSGGGTTCCHHHHHTTCSCC---
T ss_pred             --------------------------CccCCHHHHHHHHHhcccCCCCCcCHHHHHHhCchhccCCHHHHHhcCCCCCCC
Confidence                                      123799999999999999999999996 8999999999876533  33344454


Q ss_pred             Cc
Q 035861          326 PQ  327 (332)
Q Consensus       326 ~~  327 (332)
                      |+
T Consensus       277 p~  278 (320)
T d1xjda_         277 PK  278 (320)
T ss_dssp             --
T ss_pred             CC
Confidence            43


No 19 
>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.5e-58  Score=389.69  Aligned_cols=256  Identities=21%  Similarity=0.309  Sum_probs=207.6

Q ss_pred             hcc-cccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEc--
Q 035861           11 FEF-EKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMD--   87 (332)
Q Consensus        11 ~~y-~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--   87 (332)
                      .+| ++.++||+|+||+||+|++..++..||+|++..........      ..+.+|++++++++||||+++++++..  
T Consensus         8 gry~~~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~------~~~~~E~~il~~l~HpnIv~~~~~~~~~~   81 (270)
T d1t4ha_           8 GRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSER------QRFKEEAEMLKGLQHPNIVRFYDSWESTV   81 (270)
T ss_dssp             SCEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHH------HHHHHHHHHHTTCCCTTBCCEEEEEEEES
T ss_pred             CCEEEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHH------HHHHHHHHHHHhCCCCCeeeEEEEEeecc
Confidence            345 67778999999999999999999999999997654433221      246789999999999999999999853  


Q ss_pred             -CCCeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--cccccCCCCCEEEc-CCCcEEEeeccc
Q 035861           88 -DHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNW--VLHRDLKTSNLLLN-NQGVLKICDFGM  163 (332)
Q Consensus        88 -~~~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~--i~H~di~p~Nili~-~~~~~~l~df~~  163 (332)
                       +...+|+||||++|+.+.........+++..+..++.||+.||+|||++|  |+||||||+|||++ .++.+||+|||+
T Consensus        82 ~~~~~~~ivmE~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~gl~yLH~~~~~IiHrDiKp~NILl~~~~~~~Kl~DFGl  161 (270)
T d1t4ha_          82 KGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGL  161 (270)
T ss_dssp             SSCEEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTG
T ss_pred             ccCCEEEEEEeCCCCCcHHHHHhccccccHHHHHHHHHHHHHHHHHHHHCCCCEEeCCcChhhceeeCCCCCEEEeecCc
Confidence             34568999999997555444444678999999999999999999999999  99999999999997 478999999999


Q ss_pred             ccccCCCCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCccc
Q 035861          164 SRQYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWP  243 (332)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  243 (332)
                      +.....  .......||+.|+|||++.+  .++.++||||||+++|+|++|..||..........+.+.... .+.    
T Consensus       162 a~~~~~--~~~~~~~GT~~Y~aPE~~~~--~~~~~~DIwSlGvilyel~~g~~Pf~~~~~~~~~~~~i~~~~-~~~----  232 (270)
T d1t4ha_         162 ATLKRA--SFAKAVIGTPEFMAPEMYEE--KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGV-KPA----  232 (270)
T ss_dssp             GGGCCT--TSBEESCSSCCCCCGGGGGT--CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTC-CCG----
T ss_pred             ceeccC--CccCCcccCccccCHHHhCC--CCCCcCchhhHHHHHHHHHHCCCCCCCcccHHHHHHHHHcCC-CCc----
Confidence            986433  23346689999999999875  589999999999999999999999987654443333222110 000    


Q ss_pred             CCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCC
Q 035861          244 GLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFH  310 (332)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~  310 (332)
                                                   ..+..+++++++||.+||+.||++|||++|+|+||||+
T Consensus       233 -----------------------------~~~~~~~~~~~~li~~~l~~dp~~R~s~~ell~Hp~fk  270 (270)
T d1t4ha_         233 -----------------------------SFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQ  270 (270)
T ss_dssp             -----------------------------GGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC
T ss_pred             -----------------------------ccCccCCHHHHHHHHHHccCCHhHCcCHHHHhCCcccC
Confidence                                         01123688999999999999999999999999999996


No 20 
>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}
Probab=100.00  E-value=1.3e-58  Score=406.34  Aligned_cols=270  Identities=21%  Similarity=0.346  Sum_probs=215.5

Q ss_pred             chhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcC
Q 035861            9 SVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDD   88 (332)
Q Consensus         9 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~   88 (332)
                      ++++|++++.||+|+||+||+|++..+|+.||||++.............  ......++.+++.++||||+.+++++.+ 
T Consensus         2 slddy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~--~~~e~~~~~~l~~~~hpnIv~l~~~~~~-   78 (364)
T d1omwa3           2 TMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETL--ALNERIMLSLVSTGDCPFIVCMSYAFHT-   78 (364)
T ss_dssp             CSTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHH--HHHHHHHHHHHSSSCCTTBCCEEEEEEC-
T ss_pred             CHHhCeeeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHH--HHHHHHHHHHHhcCCCCcEEEEEEEEEE-
Confidence            4689999999999999999999999999999999997543211111000  0012244677788899999999999954 


Q ss_pred             CCeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccC
Q 035861           89 HDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYG  168 (332)
Q Consensus        89 ~~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~  168 (332)
                      ....|+||||++|+.+..+......+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||++....
T Consensus        79 ~~~~~ivmE~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~ylH~~~iiHrDlKP~NILl~~~g~iKl~DFGla~~~~  158 (364)
T d1omwa3          79 PDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFS  158 (364)
T ss_dssp             SSEEEEEECCCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSSSCEEECCCTTCEECS
T ss_pred             CCEEEEEEEecCCCcHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHCCccceeeccceeEEcCCCcEEEeeeceeeecC
Confidence            48899999999965444444457789999999999999999999999999999999999999999999999999998764


Q ss_pred             CCCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCC
Q 035861          169 SPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSEL  248 (332)
Q Consensus       169 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (332)
                      ..  ......||+.|+|||++..+..++.++|||||||++|+|+||..||...+..+... +.....             
T Consensus       159 ~~--~~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~-~~~~~~-------------  222 (364)
T d1omwa3         159 KK--KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHE-IDRMTL-------------  222 (364)
T ss_dssp             SS--CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSCHHH-HHHHSS-------------
T ss_pred             CC--cccccccccccchhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCCHHHHHH-HHHhcc-------------
Confidence            43  23456799999999999865678999999999999999999999998754332222 111111             


Q ss_pred             ccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCC-----HHHHhcCCCCCCCCCCCC
Q 035861          249 PGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRIT-----VDDALNHYWFHEVPLPKS  317 (332)
Q Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps-----~~ell~hp~f~~~~~~~~  317 (332)
                                          ......+..+|+++++||.+||+.||.+|||     ++|+++||||++++|...
T Consensus       223 --------------------~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~a~eil~Hp~f~~i~~~~~  276 (364)
T d1omwa3         223 --------------------TMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMV  276 (364)
T ss_dssp             --------------------SCCCCCCSSSCHHHHHHHHHHTCSSTTTSTTTSSSTHHHHHTSGGGTTCCHHHH
T ss_pred             --------------------cCCCCCCCCCCHHHHHHHHHHcccCHHHhCCCcccCHHHHHcCccccCCCHHHH
Confidence                                1111223348999999999999999999999     799999999999886544


No 21 
>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
Probab=100.00  E-value=2.7e-58  Score=389.68  Aligned_cols=267  Identities=28%  Similarity=0.401  Sum_probs=223.0

Q ss_pred             hhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCccccc-ccCCCcchhHHHHHHhhCC-CCCeeeeeeeEEc
Q 035861           10 VFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCL-EYGFPISSLREINILLSFD-HPSIVNVKEVVMD   87 (332)
Q Consensus        10 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~-~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~   87 (332)
                      .++|++++.||+|+||+||+|++..+++.||||++........... .......+.+|+.++++++ ||||+++++++. 
T Consensus         2 ~~~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~-   80 (277)
T d1phka_           2 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYE-   80 (277)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE-
T ss_pred             cccCEEceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeecc-
Confidence            4689999999999999999999999999999999987654332111 1112235678999999996 999999999995 


Q ss_pred             CCCeEEEEcccccc-cHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccc
Q 035861           88 DHDSVYMVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQ  166 (332)
Q Consensus        88 ~~~~~~lv~e~~~~-~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~  166 (332)
                      ++...|+||||++| +|.+.+.. ++.+++..++.++.||+.||+|||++||+||||||+||+++.++.+||+|||++..
T Consensus        81 ~~~~~~ivmE~~~~g~L~~~l~~-~~~l~e~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~  159 (277)
T d1phka_          81 TNTFFFLVFDLMKKGELFDYLTE-KVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQ  159 (277)
T ss_dssp             CSSEEEEEEECCTTCBHHHHHHH-HSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred             cCcceEEEEEcCCCchHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceEEEcCCCCeEEccchheeE
Confidence            55889999999986 56555544 67899999999999999999999999999999999999999999999999999987


Q ss_pred             cCCCCCCCccccccccccchhhhcC-----CCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCc
Q 035861          167 YGSPLKPYTSLVVTLWYRAPELLLG-----AKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETI  241 (332)
Q Consensus       167 ~~~~~~~~~~~~~~~~y~aPE~~~~-----~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~  241 (332)
                      .+.. .......||+.|+|||.+.+     ...++.++||||+|+++|+|++|..||.+.+.......+.......+.. 
T Consensus       160 ~~~~-~~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~~~~~~~~i~~~~~~~~~~-  237 (277)
T d1phka_         160 LDPG-EKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSP-  237 (277)
T ss_dssp             CCTT-CCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTT-
T ss_pred             ccCC-CceeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCCCCHHHHHHHHHhCCCCCCCc-
Confidence            6543 33455679999999999863     3457889999999999999999999999998888777776653322211 


Q ss_pred             ccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCC
Q 035861          242 WPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEV  312 (332)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~  312 (332)
                                                      ..+.+|+++++||.+||+.||++|||++|||+||||++.
T Consensus       238 --------------------------------~~~~~s~~~~~li~~~L~~~p~~R~s~~eil~h~~~~~~  276 (277)
T d1phka_         238 --------------------------------EWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQY  276 (277)
T ss_dssp             --------------------------------TGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGCTT
T ss_pred             --------------------------------ccccCCHHHHHHHHHHccCChhHCcCHHHHHcCHHHHHh
Confidence                                            122379999999999999999999999999999999863


No 22 
>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=2.8e-59  Score=405.13  Aligned_cols=296  Identities=24%  Similarity=0.355  Sum_probs=214.2

Q ss_pred             hhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCC
Q 035861           10 VFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDH   89 (332)
Q Consensus        10 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~   89 (332)
                      -++|++++.||+|+||+||+|++..+|+.||+|++........       ...+.+|+.++++++||||+++++++.++ 
T Consensus         5 ~d~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~-------~~~~~~Ei~il~~l~HpnIv~l~~~~~~~-   76 (322)
T d1s9ja_           5 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAI-------RNQIIRELQVLHECNSPYIVGFYGAFYSD-   76 (322)
T ss_dssp             GGGEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCCCTTH-------HHHHHHHGGGGGGCCCTTBCCEEEEEECS-
T ss_pred             ccCCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhhCHHH-------HHHHHHHHHHHHhCCCCCCCcEEEEEEEC-
Confidence            4689999999999999999999999999999999976432211       12567899999999999999999999544 


Q ss_pred             CeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH-CCcccccCCCCCEEEcCCCcEEEeecccccccC
Q 035861           90 DSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHD-NWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYG  168 (332)
Q Consensus        90 ~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~-~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~  168 (332)
                      ...|+||||++|+.+..+....+.+++..++.++.||+.||.|||+ +||+||||||+|||++.+|.+||+|||+|....
T Consensus        77 ~~~~iVmEy~~gg~L~~~l~~~~~l~~~~~~~~~~qil~aL~yLH~~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~  156 (322)
T d1s9ja_          77 GEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI  156 (322)
T ss_dssp             SEEEEEEECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHH
T ss_pred             CEEEEEEEcCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHhCCEEccccCHHHeeECCCCCEEEeeCCCccccC
Confidence            8899999999975444444446789999999999999999999997 599999999999999999999999999998653


Q ss_pred             CCCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHH-HcCCCCCC----ccc
Q 035861          169 SPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFK-TLGTPTET----IWP  243 (332)
Q Consensus       169 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~-~~~~~~~~----~~~  243 (332)
                      ..  ......||+.|+|||++.+ ..++.++||||+||++|+|++|+.||...+.......... ..+.....    ...
T Consensus       157 ~~--~~~~~~GT~~Y~APEvl~~-~~y~~~~DiWSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (322)
T d1s9ja_         157 DS--MANSFVGTRSYMSPERLQG-THYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTP  233 (322)
T ss_dssp             HH--TC---CCSSCCCCHHHHHC-SCCCTTHHHHHHHHHHHHHHHSSCCSSCCCTTHHHHHC------------------
T ss_pred             CC--ccccccCCccccCchHHcC-CCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhcCCcccCCcccccc
Confidence            22  2245689999999999988 6799999999999999999999999987654432211111 11100000    000


Q ss_pred             CCCCCc-cccccccCCchhhhhhhCCC-CccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCCCCC
Q 035861          244 GLSELP-GAKANFAKQPYNLLRKRFPA-ASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVPLPK  316 (332)
Q Consensus       244 ~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~~  316 (332)
                      ...... .................... ........+|.++++||.+||+.||.+|||++|+|+||||++..+.+
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~L~Hpf~~~~~~~~  308 (322)
T d1s9ja_         234 GRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSDAEE  308 (322)
T ss_dssp             ------------CCCCHHHHHHHHHTSCCCCCCBTTBCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHHHHHSC
T ss_pred             cccccccccccccchhHHHHHhhhhccCCccCccccCCHHHHHHHHHHcCCChhHCcCHHHHhhCHhhCcCCccc
Confidence            000000 00000000000111111111 11112234788999999999999999999999999999998755443


No 23 
>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1e-56  Score=387.30  Aligned_cols=290  Identities=40%  Similarity=0.726  Sum_probs=232.7

Q ss_pred             ccchhcccccccccccCcEEEEEEEECCC-CcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhC---CCCCeeeee
Q 035861            7 CRSVFEFEKLNKISEGTYGIVYRARDKKS-GEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSF---DHPSIVNVK   82 (332)
Q Consensus         7 ~~~~~~y~~~~~lg~g~~g~v~~~~~~~~-~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l---~h~~i~~~~   82 (332)
                      |+..++|++++.||+|+||+||+|++..+ ++.||||++.........      ...+.+|+.+++.+   +||||++++
T Consensus         3 c~~~~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~------~~~~~~E~~~l~~l~~~~HpnIv~~~   76 (305)
T d1blxa_           3 CRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGM------PLSTIREVAVLRHLETFEHPNVVRLF   76 (305)
T ss_dssp             CCGGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSC------BCTHHHHHHHHHHHHHTCCTTBCCEE
T ss_pred             CCCcCCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccchH------HHHHHHHHHHHHHHhhcCCCCcceee
Confidence            66778999999999999999999999765 667999999765433221      12455777776655   799999999


Q ss_pred             eeEEc----CCCeEEEEcccccccHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEE
Q 035861           83 EVVMD----DHDSVYMVMEYMEHDLKWLMES-MKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLK  157 (332)
Q Consensus        83 ~~~~~----~~~~~~lv~e~~~~~l~~~~~~-~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~  157 (332)
                      +++..    .....++++|+++|+++..... ....+++..++.++.|++.||+|||++||+||||||+|||++.++.+|
T Consensus        77 ~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ivHrDiKp~NILi~~~~~~k  156 (305)
T d1blxa_          77 DVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIK  156 (305)
T ss_dssp             EEEEEEECSSEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEE
T ss_pred             eeecccccccCceEEEEEEeccCCchhhhhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEEecCCCccEEEEcCCCCee
Confidence            98843    3357899999999987665443 456799999999999999999999999999999999999999999999


Q ss_pred             EeecccccccCCCCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCC
Q 035861          158 ICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTP  237 (332)
Q Consensus       158 l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~  237 (332)
                      |+|||.+..... ........||+.|+|||++.+ ..++.++||||||+++|+|++|..||...+..+....+....+.+
T Consensus       157 l~dfg~~~~~~~-~~~~~~~~gT~~Y~APE~~~~-~~y~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~  234 (305)
T d1blxa_         157 LADFGLARIYSF-QMALTSVVVTLWYRAPEVLLQ-SSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLP  234 (305)
T ss_dssp             ECSCCSCCCCCG-GGGGCCCCCCCTTCCHHHHTT-CCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCC
T ss_pred             ecchhhhhhhcc-cccCCCcccChhhcCcchhcC-CCCChhehhhchHHHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCC
Confidence            999999876532 234456789999999999987 678999999999999999999999999999999999998888777


Q ss_pred             CCCcccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCCC
Q 035861          238 TETIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVPL  314 (332)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~  314 (332)
                      ....++............          ..........+.+++.+++||.+||+.||++|||++|+|+||||+++..
T Consensus       235 ~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~sa~e~L~Hpff~~i~~  301 (305)
T d1blxa_         235 GEEDWPRDVALPRQAFHS----------KSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDLER  301 (305)
T ss_dssp             CGGGSCTTCSSCGGGSCC----------CCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTCCC
T ss_pred             chhcccccccchhhhhcc----------ccccchhhccccCCHHHHHHHHHHCcCChhHCcCHHHHhcChhhcCchh
Confidence            766555433322211111          0111112223457899999999999999999999999999999998764


No 24 
>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=2.7e-56  Score=382.43  Aligned_cols=289  Identities=42%  Similarity=0.752  Sum_probs=237.8

Q ss_pred             hhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCC
Q 035861           10 VFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDH   89 (332)
Q Consensus        10 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~   89 (332)
                      +++|++++.||+|+||+||+|++..+++.||||++........      ....+.+|+.+++.++||||+++++.+... 
T Consensus         1 ~~ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~------~~~~~~~E~~il~~l~h~niv~~~~~~~~~-   73 (292)
T d1unla_           1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEG------VPSSALREICLLKELKHKNIVRLHDVLHSD-   73 (292)
T ss_dssp             CCSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTT------HHHHHHHHHHHHTTCCCTTBCCEEEEEECS-
T ss_pred             CCCCEeeeEEecCcCeEEEEEEECCCCcEEEEEEEehhhCChH------HHHHHHHHHHHHHhcCcCCEEeeccccccc-
Confidence            4689999999999999999999999999999999976543221      122567999999999999999999999554 


Q ss_pred             CeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCC
Q 035861           90 DSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGS  169 (332)
Q Consensus        90 ~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~  169 (332)
                      ...+++++++.|+.+..+....+.+++..++.++.|++.||+|||++||+|+||||+||+++.++.+||+|||.+.....
T Consensus        74 ~~~~iv~~~~~~~~l~~~~~~~~~~~~~~~~~~~~q~~~aL~~lH~~~IvHrDiKP~NIli~~~~~~kl~DFG~a~~~~~  153 (292)
T d1unla_          74 KKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGI  153 (292)
T ss_dssp             SEEEEEEECCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCS
T ss_pred             cceeEEeeeccccccccccccccccchhHHHHHHHHHHHHHHHhhcCCEeeecccCcccccccCCceeeeecchhhcccC
Confidence            78899999999998888888888999999999999999999999999999999999999999999999999999988766


Q ss_pred             CCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCC-CCChHHHHHHHHHHcCCCCCCcccCCCCC
Q 035861          170 PLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFS-GTTEVDQIDKIFKTLGTPTETIWPGLSEL  248 (332)
Q Consensus       170 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (332)
                      .........++..|+|||.+.....++.++||||||+++|+|++|..||. ..+..+....+....+.+....++.....
T Consensus       154 ~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (292)
T d1unla_         154 PVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKL  233 (292)
T ss_dssp             CCSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGS
T ss_pred             CCccceeeccccchhhhhHhccCCCCCchhhccccchHHHHHhhCCCCCCCCCCHHHHHHHHHhhcCCCChhhhhhhhhc
Confidence            55555666788999999999876778999999999999999999999854 55666677777777777766655554433


Q ss_pred             ccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCC
Q 035861          249 PGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVP  313 (332)
Q Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~  313 (332)
                      ..........        .........+.+++.+++||++||+.||.+|||++|+|+||||+++.
T Consensus       234 ~~~~~~~~~~--------~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~Hp~f~~~~  290 (292)
T d1unla_         234 PDYKPYPMYP--------ATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDFC  290 (292)
T ss_dssp             TTCCCCCCCC--------TTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGSSCS
T ss_pred             cccccccccc--------ccchhhhccccCCHHHHHHHHHHccCChhHCcCHHHHhcChhhcCCC
Confidence            2221111110        01122223345789999999999999999999999999999999854


No 25 
>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.6e-57  Score=393.10  Aligned_cols=258  Identities=25%  Similarity=0.392  Sum_probs=220.2

Q ss_pred             chhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcC
Q 035861            9 SVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDD   88 (332)
Q Consensus         9 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~   88 (332)
                      .+++|++++.||+|+||+||+|++..+++.||||++.......         ..+.+|+.++++++||||+++++++.+ 
T Consensus         3 ~~~rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~~~~---------~~~~~Ei~il~~l~HpnIv~~~~~~~~-   72 (321)
T d1tkia_           3 LYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQ---------VLVKKEISILNIARHRNILHLHESFES-   72 (321)
T ss_dssp             CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTHHH---------HHHHHHHHHHHHSCCTTBCCEEEEEEE-
T ss_pred             CccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCcccH---------HHHHHHHHHHHhCCCCCCCeEEEEEEE-
Confidence            4678999999999999999999999999999999997543211         135689999999999999999999954 


Q ss_pred             CCeEEEEcccccc-cHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCC--CcEEEeeccccc
Q 035861           89 HDSVYMVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQ--GVLKICDFGMSR  165 (332)
Q Consensus        89 ~~~~~lv~e~~~~-~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~--~~~~l~df~~~~  165 (332)
                      +..+|+|||||+| ++.+.+......+++.+++.++.||+.||+|||++||+||||||+||+++.+  +.++|+|||.+.
T Consensus        73 ~~~~~lvmE~~~gg~L~~~i~~~~~~l~e~~~~~i~~qi~~al~yLH~~~iiHrDlKp~NIll~~~~~~~ikl~DFG~~~  152 (321)
T d1tkia_          73 MEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQAR  152 (321)
T ss_dssp             TTEEEEEECCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCTTCE
T ss_pred             CCEEEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcccccccceeecCCCceEEEEcccchhh
Confidence            4889999999996 5666665555579999999999999999999999999999999999999854  489999999998


Q ss_pred             ccCCCCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCC
Q 035861          166 QYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGL  245 (332)
Q Consensus       166 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (332)
                      ..... .......+++.|+|||.+.+ ..++.++||||||+++|+|++|..||...+..+....+.+.....+...    
T Consensus       153 ~~~~~-~~~~~~~~t~~y~ape~~~~-~~~~~~~DiWSlGvily~ll~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~----  226 (321)
T d1tkia_         153 QLKPG-DNFRLLFTAPEYYAPEVHQH-DVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEA----  226 (321)
T ss_dssp             ECCTT-CEEEEEESCGGGSCHHHHTT-CEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCHHH----
T ss_pred             ccccC-CcccccccccccccchhccC-CCCCchhhcccHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCChhh----
Confidence            76432 33455678999999999887 6789999999999999999999999999998888888876543333221    


Q ss_pred             CCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCC
Q 035861          246 SELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHE  311 (332)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~  311 (332)
                                                   .+.+|+++++||.+||..||.+|||++|+|+||||++
T Consensus       227 -----------------------------~~~~s~~~~~li~~~L~~dp~~R~s~~eil~hp~~~~  263 (321)
T d1tkia_         227 -----------------------------FKEISIEAMDFVDRLLVKERKSRMTASEALQHPWLKQ  263 (321)
T ss_dssp             -----------------------------HTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHS
T ss_pred             -----------------------------ccCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhcc
Confidence                                         1237899999999999999999999999999999975


No 26 
>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=3.5e-56  Score=386.03  Aligned_cols=299  Identities=41%  Similarity=0.765  Sum_probs=234.5

Q ss_pred             cccchhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeE
Q 035861            6 GCRSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVV   85 (332)
Q Consensus         6 ~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~   85 (332)
                      .|..+++|++++.||+|+||+||+|++..+|+.||||++.......      ....++.+|+.++++++|||++++++++
T Consensus         5 ~~~~~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~------~~~~~~~~E~~il~~l~h~nii~~~~~~   78 (318)
T d3blha1           5 FCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKE------GFPITALREIKILQLLKHENVVNLIEIC   78 (318)
T ss_dssp             TSCBGGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----CTT------SSCHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             CCCccCCEEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcch------HHHHHHHHHHHHHHHhcCCCccceEeee
Confidence            4677899999999999999999999999999999999987654322      1223567999999999999999999998


Q ss_pred             EcC-------CCeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEE
Q 035861           86 MDD-------HDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKI  158 (332)
Q Consensus        86 ~~~-------~~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l  158 (332)
                      ...       ....|+|||++++++..........+++..++.++.||+.||.|||++||+||||||+|||++.++.+||
T Consensus        79 ~~~~~~~~~~~~~~~iv~e~~~~~~~~~~~~~~~~~~~~~~~~i~~qil~~l~~lH~~~ivHrDlKp~NILl~~~~~~kl  158 (318)
T d3blha1          79 RTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKL  158 (318)
T ss_dssp             EC----------CEEEEEECCCEEHHHHHTCTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEE
T ss_pred             ecccccccccCceEEEEEeccCCCccchhhhcccccccHHHHHHHHHHHHHHHHhccCCEEecCcCchheeecCCCcEEe
Confidence            543       2468999999999988877777788999999999999999999999999999999999999999999999


Q ss_pred             eecccccccCCC----CCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHc
Q 035861          159 CDFGMSRQYGSP----LKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTL  234 (332)
Q Consensus       159 ~df~~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~  234 (332)
                      +|||++......    ........||+.|+|||++.+...++.++||||||+++|+|++|..||.+.+.......+....
T Consensus       159 ~dfg~~~~~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~~~~~~~~~~i~~~~  238 (318)
T d3blha1         159 ADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLC  238 (318)
T ss_dssp             CCCTTCEECCC-----CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHH
T ss_pred             eecceeeecccccccccccccceecCHHHhhHHHHcCCCCCCcHHHcccCCceeeeHhhCCCCCCCCCHHHHHHHHHHhc
Confidence            999999765321    2233445789999999999876778999999999999999999999999999988888888887


Q ss_pred             CCCCCCcccCCCCCcccccc-ccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCC
Q 035861          235 GTPTETIWPGLSELPGAKAN-FAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVP  313 (332)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~  313 (332)
                      +.+................. ............+.      ....++.+++||.+||+.||++|||++|+|+||||+.-+
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~dLl~~mL~~dP~~R~sa~elL~Hpff~~~p  312 (318)
T d3blha1         239 GSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLK------AYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWSDP  312 (318)
T ss_dssp             CCCCTTTSTTCCCC-------CCSSCCBCHHHHHH------HHHCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGSSSS
T ss_pred             CCCChhhccccchhhhhhhhcccccccccchhhhc------cccCCHHHHHHHHHHCcCChhHCcCHHHHHcChhhccCC
Confidence            77766655444332211100 00000000000000      001467888999999999999999999999999999765


Q ss_pred             CCC
Q 035861          314 LPK  316 (332)
Q Consensus       314 ~~~  316 (332)
                      .|+
T Consensus       313 ~p~  315 (318)
T d3blha1         313 MPS  315 (318)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            554


No 27 
>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=6.4e-57  Score=381.50  Aligned_cols=258  Identities=22%  Similarity=0.312  Sum_probs=210.9

Q ss_pred             hhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCC--CCCeeeeeeeEEc
Q 035861           10 VFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFD--HPSIVNVKEVVMD   87 (332)
Q Consensus        10 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~--h~~i~~~~~~~~~   87 (332)
                      -++|++.+.||+|+||+||+|++..+++.||||++...........  .....+.+|+.++++++  ||||+++++++. 
T Consensus         3 ~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~--~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~-   79 (273)
T d1xwsa_           3 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGEL--PNGTRVPMEVVLLKKVSSGFSGVIRLLDWFE-   79 (273)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEEC--TTCCEEEHHHHHHHHHCSSSCSBCCEEEEEE-
T ss_pred             CCeEEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhh--hHHHHHHHHHHHHHHhccCCCCccEEEEEEe-
Confidence            4689999999999999999999999999999999987654332211  11234678999999986  899999999994 


Q ss_pred             CCCeEEEEcccccc-cHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCC-CcEEEeeccccc
Q 035861           88 DHDSVYMVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQ-GVLKICDFGMSR  165 (332)
Q Consensus        88 ~~~~~~lv~e~~~~-~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~-~~~~l~df~~~~  165 (332)
                      +....++|||++.+ +.+.........+++..++.++.||+.||+|||++||+||||||+||+++.+ +.+||+|||++.
T Consensus        80 ~~~~~~lv~e~~~~~~~l~~~~~~~~~l~e~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NIll~~~~~~vkl~DFG~a~  159 (273)
T d1xwsa_          80 RPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGA  159 (273)
T ss_dssp             CSSEEEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred             eCCeEEEEEEeccCcchHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCcccceEEecCCCeEEECccccce
Confidence            44889999999975 3333333446789999999999999999999999999999999999999855 799999999998


Q ss_pred             ccCCCCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCC
Q 035861          166 QYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGL  245 (332)
Q Consensus       166 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (332)
                      ....  .......||+.|+|||++.+...++.++||||||+++|+|++|..||...+      .+.+...          
T Consensus       160 ~~~~--~~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~------~i~~~~~----------  221 (273)
T d1xwsa_         160 LLKD--TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQV----------  221 (273)
T ss_dssp             ECCS--SCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH------HHHHCCC----------
T ss_pred             eccc--ccccccccCCCcCCHHHHcCCCCCCcccccccceeeehhHhhCCCCCCCch------HHhhccc----------
Confidence            6543  234566899999999999875556788999999999999999999997532      2222110          


Q ss_pred             CCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCCCC
Q 035861          246 SELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVPLP  315 (332)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~  315 (332)
                                                 ..++.+|+++++||.+||+.||++|||++|+|+||||+++..|
T Consensus       222 ---------------------------~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~hp~~~~~~~p  264 (273)
T d1xwsa_         222 ---------------------------FFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLP  264 (273)
T ss_dssp             ---------------------------CCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSCCCH
T ss_pred             ---------------------------CCCCCCCHHHHHHHHHHccCCHhHCcCHHHHhcCHhhCCCCCC
Confidence                                       1123379999999999999999999999999999999987644


No 28 
>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=6.7e-56  Score=388.55  Aligned_cols=286  Identities=34%  Similarity=0.580  Sum_probs=227.9

Q ss_pred             hhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEc--
Q 035861           10 VFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMD--   87 (332)
Q Consensus        10 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--   87 (332)
                      ..+|+.++.||+|+||+||+|++..+|+.||||++.....            ...+|+.++++++|+||+++++++..  
T Consensus        19 ~~~Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~------------~~~~Ei~il~~l~h~niv~~~~~~~~~~   86 (350)
T d1q5ka_          19 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR------------FKNRELQIMRKLDHCNIVRLRYFFYSSG   86 (350)
T ss_dssp             EEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS------------SCCHHHHHHHHCCCTTBCCEEEEEEEC-
T ss_pred             cCCcEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccch------------HHHHHHHHHHhcCCCCCCcEEEEEEecC
Confidence            3489999999999999999999999999999999965421            22379999999999999999999843  


Q ss_pred             ---CCCeEEEEcccccccHHHHHH---hcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCC-cEEEee
Q 035861           88 ---DHDSVYMVMEYMEHDLKWLME---SMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQG-VLKICD  160 (332)
Q Consensus        88 ---~~~~~~lv~e~~~~~l~~~~~---~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~-~~~l~d  160 (332)
                         +..+.|+||||+++++...+.   .....+++..++.++.||+.||+|||++||+||||||+|||++.++ .+||+|
T Consensus        87 ~~~~~~~~~lv~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~~IiHrDiKp~NILl~~~~~~~kl~D  166 (350)
T d1q5ka_          87 EKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCD  166 (350)
T ss_dssp             -CCSCCEEEEEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTTCCEEECC
T ss_pred             ccCCceEEEEEEeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCcceEEEecCCCceeEec
Confidence               334689999999998755543   3466799999999999999999999999999999999999999875 899999


Q ss_pred             cccccccCCCCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCC
Q 035861          161 FGMSRQYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTET  240 (332)
Q Consensus       161 f~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~  240 (332)
                      ||++...... .......|+..|+|||.+.+...++.++||||||+++|+|++|..||...+..+....+.+..+.+...
T Consensus       167 FG~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~~~~~l~~i~~~~g~~~~~  245 (350)
T d1q5ka_         167 FGSAKQLVRG-EPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTRE  245 (350)
T ss_dssp             CTTCEECCTT-SCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCHH
T ss_pred             ccchhhccCC-cccccccccccccChHHhhcccCCCcceeecccceEEEehhhCCCCCCCCCHHHHHHHHHHHhCCChHH
Confidence            9999876432 334556889999999998876789999999999999999999999999999999888888877766654


Q ss_pred             cccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCCCCC
Q 035861          241 IWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVPLPK  316 (332)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~~  316 (332)
                      .+.......... .....       ..........+.+++++++||.+||..||++|||+.|+|+||||+++..+.
T Consensus       246 ~~~~~~~~~~~~-~~~~~-------~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~~~~  313 (350)
T d1q5ka_         246 QIREMNPNYTEF-KFPQI-------KAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPN  313 (350)
T ss_dssp             HHHHHCC---CC-CCCCC-------CCCCGGGTSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGGGCTT
T ss_pred             hhhhhccchhhc-ccccc-------ccCchhhhcccCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhccccCCC
Confidence            332211100000 00000       000001112344789999999999999999999999999999999876544


No 29 
>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=8.7e-56  Score=387.69  Aligned_cols=294  Identities=33%  Similarity=0.553  Sum_probs=224.9

Q ss_pred             chhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcC
Q 035861            9 SVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDD   88 (332)
Q Consensus         9 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~   88 (332)
                      ..++|++++.||+|+||+||+|++..+|+.||||++.........      ...+.+|+.++++++||||+++++++...
T Consensus        16 ~~~~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~------~~~~~~Ei~il~~l~hpniv~l~~~~~~~   89 (346)
T d1cm8a_          16 VRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELF------AKRAYRELRLLKHMRHENVIGLLDVFTPD   89 (346)
T ss_dssp             CBSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHH------HHHHHHHHHHHHHCCBTTBCCCSEEECSC
T ss_pred             cCCcEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhhcChHH------HHHHHHHHHHHHhcCCCCeeEEEEEeccC
Confidence            456999999999999999999999999999999999754332211      12467899999999999999999998544


Q ss_pred             C-----CeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeeccc
Q 035861           89 H-----DSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGM  163 (332)
Q Consensus        89 ~-----~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~  163 (332)
                      +     ..+|+||||+++++.....  +..+++..++.++.||+.||+|||++||+|+||||+|||++.++.++++|||.
T Consensus        90 ~~~~~~~~~~lv~e~~~~~l~~~~~--~~~l~~~~~~~~~~qi~~aL~~LH~~~IiHrDiKp~NIL~~~~~~~kl~Dfg~  167 (346)
T d1cm8a_          90 ETLDDFTDFYLVMPFMGTDLGKLMK--HEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGL  167 (346)
T ss_dssp             SSTTTCCCCEEEEECCSEEHHHHHH--HCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTT
T ss_pred             ccccccceEEEEEecccccHHHHHH--hccccHHHHHHHHHHHHHHHHHHHhCCCcccccCcchhhcccccccccccccc
Confidence            2     3579999999777665543  46799999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCccc
Q 035861          164 SRQYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWP  243 (332)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  243 (332)
                      +...+..   .....|++.|+|||++.+...++.++||||||+++|+|++|..||...+..+....+....+.++...+.
T Consensus       168 a~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  244 (346)
T d1cm8a_         168 ARQADSE---MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQ  244 (346)
T ss_dssp             CEECCSS---CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHH
T ss_pred             eeccCCc---cccccccccccCHHHHcCCCCCCccchhhcchHHHHHHHHCcCCCCCCChHHHHHHHHhccCCCcHHHHh
Confidence            9876543   3456789999999999876778999999999999999999999999999988888888877766654433


Q ss_pred             CCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCCCCCCCC
Q 035861          244 GLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVPLPKSKD  319 (332)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~~~~~  319 (332)
                      .+.......      .................+.+++.+++||.+||..||.+|||+.|+|+||||++++.+....
T Consensus       245 ~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~eiL~Hp~f~~~~~~~~~~  314 (346)
T d1cm8a_         245 RLQSDEAKN------YMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLHDTEDEP  314 (346)
T ss_dssp             TCSCHHHHH------HHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC------
T ss_pred             hhcchhhhh------hhccCCcccccchHHhccCCCHHHHHHHHHHCcCChhHCcCHHHHhcChhhCcCCCccccc
Confidence            222110000      0000000001111122345789999999999999999999999999999999987554433


No 30 
>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.6e-54  Score=362.93  Aligned_cols=249  Identities=23%  Similarity=0.393  Sum_probs=211.6

Q ss_pred             hhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCC
Q 035861           10 VFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDH   89 (332)
Q Consensus        10 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~   89 (332)
                      .++|++++.||+|+||+||+|+++ ++..||||++.......         ..+.+|+..+++++||||+++++++.+ +
T Consensus         3 ~~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~~---------~~~~~Ev~~~~~l~HpnIv~~~g~~~~-~   71 (258)
T d1k2pa_           3 PKDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSMSE---------DEFIEEAKVMMNLSHEKLVQLYGVCTK-Q   71 (258)
T ss_dssp             CCCCCCCCCCCEETTEEEEEEEET-TTEEEEEEEEESSSSCH---------HHHHHHHHHHHTCCCTTBCCEEEEECC-S
T ss_pred             hHHCEEeEEEecCCCeEEEEEEEC-CCCEEEEEEECcCcCCH---------HHHHHHHHHHHhcCCCceeeEEEEEee-C
Confidence            468999999999999999999985 67789999998654322         156799999999999999999999844 4


Q ss_pred             CeEEEEcccccc-cHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccC
Q 035861           90 DSVYMVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYG  168 (332)
Q Consensus        90 ~~~~lv~e~~~~-~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~  168 (332)
                      ...++||||+++ ++...+......+++..++.++.|+++||+|||++||+||||||+||+++.++.+||+|||++....
T Consensus        72 ~~~~iv~Ey~~~g~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~~LH~~~iiH~dlk~~Nill~~~~~~kl~DfG~a~~~~  151 (258)
T d1k2pa_          72 RPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVL  151 (258)
T ss_dssp             SSEEEEEECCTTEEHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTBCCSCCSGGGEEECTTCCEEECCCSSCCBCS
T ss_pred             CceEEEEEccCCCcHHHhhhccccCCcHHHHHHHHHHHHHHHHHHhhcCcccccccceeEEEcCCCcEEECcchhheecc
Confidence            789999999985 5666666667789999999999999999999999999999999999999999999999999997654


Q ss_pred             CC-CCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCCCCCCcccCCC
Q 035861          169 SP-LKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA-KKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLS  246 (332)
Q Consensus       169 ~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (332)
                      .. ........+|+.|+|||.+.+ ..++.++||||||+++|||+| |+.||...+..+....+......+         
T Consensus       152 ~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~~~~~~~i~~~~~~~---------  221 (258)
T d1k2pa_         152 DDEYTSSVGSKFPVRWSPPEVLMY-SKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLY---------  221 (258)
T ss_dssp             SSSCCCCCCSCCCGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHTTCCCC---------
T ss_pred             CCCceeecccCCCCCcCCcHHhcC-CCCCcceeecccchhhHhHHhcCCCCCCCCCHHHHHHHHHhCCCCC---------
Confidence            32 223345678999999999987 678999999999999999998 899999988887777665432211         


Q ss_pred             CCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcC
Q 035861          247 ELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNH  306 (332)
Q Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h  306 (332)
                                                 .+..+++++.+||.+||+.||++|||+++|++|
T Consensus       222 ---------------------------~p~~~~~~l~~li~~cl~~dP~~RPt~~eil~~  254 (258)
T d1k2pa_         222 ---------------------------RPHLASEKVYTIMYSCWHEKADERPTFKILLSN  254 (258)
T ss_dssp             ---------------------------CCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred             ---------------------------CcccccHHHHHHHHHHccCCHhHCcCHHHHHHH
Confidence                                       122378899999999999999999999999987


No 31 
>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.7e-54  Score=366.38  Aligned_cols=255  Identities=20%  Similarity=0.276  Sum_probs=202.9

Q ss_pred             hhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCC
Q 035861           10 VFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDH   89 (332)
Q Consensus        10 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~   89 (332)
                      .++|++++.||+|+||+||+|+.+   ..||||++.........      ...+.+|+.++++++||||+++++++ .+ 
T Consensus         7 ~~~~~~~~~lG~G~fg~Vy~~~~~---~~vAvK~~~~~~~~~~~------~~~~~~E~~~l~~l~HpnIv~~~~~~-~~-   75 (276)
T d1uwha_           7 DGQITVGQRIGSGSFGTVYKGKWH---GDVAVKMLNVTAPTPQQ------LQAFKNEVGVLRKTRHVNILLFMGYS-TA-   75 (276)
T ss_dssp             TTCCCCCSEEEECSSCEEEEEESS---SEEEEEECCCSSCCTTH------HHHHHHHHHHHTTCCCTTBCCEEEEE-CS-
T ss_pred             cccEEEEEEEeeCCCcEEEEEEEC---CEEEEEEEEcccCCHHH------HHHHHHHHHHHHhCCCCCEeeeeEEE-ec-
Confidence            468999999999999999999865   35999999765433321      12567899999999999999999987 33 


Q ss_pred             CeEEEEcccccc-cHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccC
Q 035861           90 DSVYMVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYG  168 (332)
Q Consensus        90 ~~~~lv~e~~~~-~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~  168 (332)
                      ...++||||++| ++.+.+......+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++....
T Consensus        76 ~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~gl~yLH~~~ivHrDlKp~NiLl~~~~~~Kl~DFGla~~~~  155 (276)
T d1uwha_          76 PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKS  155 (276)
T ss_dssp             SSCEEEEECCCEEEHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTSSEEECCCCCSCC--
T ss_pred             cEEEEEEecCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHhcCCEeccccCHHHEEEcCCCCEEEccccceeecc
Confidence            457899999985 6666666666789999999999999999999999999999999999999999999999999997653


Q ss_pred             CC--CCCCccccccccccchhhhcCC--CCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccC
Q 035861          169 SP--LKPYTSLVVTLWYRAPELLLGA--KKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPG  244 (332)
Q Consensus       169 ~~--~~~~~~~~~~~~y~aPE~~~~~--~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (332)
                      ..  ........||+.|+|||++.+.  ..++.++||||||+++|||+||..||.+.+..............++.     
T Consensus       156 ~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~p~-----  230 (276)
T d1uwha_         156 RWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPD-----  230 (276)
T ss_dssp             ----------CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHHTSCCCC-----
T ss_pred             ccCCcccccccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCc-----
Confidence            22  2233456789999999998642  35799999999999999999999999887666555544433211111     


Q ss_pred             CCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcC
Q 035861          245 LSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNH  306 (332)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h  306 (332)
                                                ....+..+++++.+||.+||+.||++|||+.||+++
T Consensus       231 --------------------------~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~il~~  266 (276)
T d1uwha_         231 --------------------------LSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILAS  266 (276)
T ss_dssp             --------------------------GGGSCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             --------------------------chhccccchHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence                                      111233478999999999999999999999999986


No 32 
>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.2e-55  Score=383.37  Aligned_cols=262  Identities=27%  Similarity=0.408  Sum_probs=206.7

Q ss_pred             cccchhcccccc-cccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhh-CCCCCeeeeee
Q 035861            6 GCRSVFEFEKLN-KISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLS-FDHPSIVNVKE   83 (332)
Q Consensus         6 ~~~~~~~y~~~~-~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~-l~h~~i~~~~~   83 (332)
                      ....+++|++++ .||+|+||+||+|++..+++.||||++....             .+.+|+.++.+ ++||||+++++
T Consensus         6 ~~~i~~~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~-------------~~~~E~~~~~~~~~hpnIv~l~~   72 (335)
T d2ozaa1           6 KNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCP-------------KARREVELHWRASQCPHIVRIVD   72 (335)
T ss_dssp             CSCGGGTEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECSH-------------HHHHHHHHHHHHTTSTTBCCEEE
T ss_pred             CCCcccCEEEeeEEeeeccCeEEEEEEECCCCCEEEEEEECCcH-------------HHHHHHHHHHHhcCCCCCCeEEE
Confidence            344678999986 5999999999999999999999999986321             34589988654 58999999999


Q ss_pred             eEEc---CCCeEEEEcccccc-cHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcC---CCc
Q 035861           84 VVMD---DHDSVYMVMEYMEH-DLKWLMESM-KQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNN---QGV  155 (332)
Q Consensus        84 ~~~~---~~~~~~lv~e~~~~-~l~~~~~~~-~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~---~~~  155 (332)
                      ++.+   .+..+|+|||||+| +|.+.+... ...+++..++.++.||+.||+|||++||+||||||+||+++.   .+.
T Consensus        73 ~~~~~~~~~~~~~ivmEy~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~iiHRDiKp~NIll~~~~~~~~  152 (335)
T d2ozaa1          73 VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAI  152 (335)
T ss_dssp             EEEEEETTEEEEEEEEECCCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSTTCC
T ss_pred             EEeecccCCCEEEEEEECCCCCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHcCCcccccccccccccccccccc
Confidence            8843   34678999999985 666666553 356999999999999999999999999999999999999985   467


Q ss_pred             EEEeecccccccCCCCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcC
Q 035861          156 LKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLG  235 (332)
Q Consensus       156 ~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~  235 (332)
                      +||+|||++...... .......||+.|+|||++.+ ..++.++||||||+++|+|+||..||.+.+.......+.....
T Consensus       153 ~Kl~DFG~a~~~~~~-~~~~~~~gt~~y~aPE~~~~-~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~~~~~~~~~~i~  230 (335)
T d2ozaa1         153 LKLTDFGFAKETTSH-NSLTTPCYTPYYVAPEVLGP-EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIR  230 (335)
T ss_dssp             EEECCCTTCEECCCC-CCCCCCSCCCSSCCCCCCCG-GGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC--------CCC
T ss_pred             ccccccceeeeccCC-CccccccCCcccCCcHHHcC-CCCCHHHHHHhhchhHHHHhhCCCCCCCCCHHHHHHHHHHHHh
Confidence            999999999876433 33456689999999999876 6789999999999999999999999987655444333322110


Q ss_pred             CCCCCcccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCC
Q 035861          236 TPTETIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHE  311 (332)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~  311 (332)
                      ....                             ..+....+.+|+++++||.+||+.||++|||+.|+|+||||.+
T Consensus       231 ~~~~-----------------------------~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~hp~~~~  277 (335)
T d2ozaa1         231 MGQY-----------------------------EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQ  277 (335)
T ss_dssp             SCSS-----------------------------SCCTTHHHHSCHHHHHHHHHHSCSSTTTSCCHHHHHHSHHHHT
T ss_pred             cCCC-----------------------------CCCCcccccCCHHHHHHHHHHccCChhHCcCHHHHHcCHHhhC
Confidence            0000                             0000111237899999999999999999999999999999975


No 33 
>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.9e-54  Score=364.27  Aligned_cols=249  Identities=23%  Similarity=0.416  Sum_probs=197.7

Q ss_pred             hhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCC
Q 035861           10 VFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDH   89 (332)
Q Consensus        10 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~   89 (332)
                      .++|++++.||+|+||+||+|.+. +++.||||++.......         ..+.+|+..+++++||||+++++++..+ 
T Consensus         4 p~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~i~~~~~~~---------~~~~~E~~~l~~l~HpnIv~~~g~~~~~-   72 (263)
T d1sm2a_           4 PSELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAMSE---------EDFIEEAEVMMKLSHPKLVQLYGVCLEQ-   72 (263)
T ss_dssp             CSCEEEEEEEECCSSCCEEEEEET-TTEEEEEEECCSSSSCH---------HHHHHHHHHHHHCCCTTBCCEEEEECSS-
T ss_pred             hHHcEEEEEEeeCCCeEEEEEEEC-CCCEEEEEEECCCcCcH---------HHHHHHHHHHHhcCCCCcccccceeccC-
Confidence            468999999999999999999986 46789999987543222         2467999999999999999999999554 


Q ss_pred             CeEEEEcccccc-cHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccC
Q 035861           90 DSVYMVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYG  168 (332)
Q Consensus        90 ~~~~lv~e~~~~-~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~  168 (332)
                      ...++||||+++ ++.+.+......+++..+..++.||+.||+|||+++|+||||||+||+++.++.+||+|||+++...
T Consensus        73 ~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~i~~qia~gl~~lH~~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~  152 (263)
T d1sm2a_          73 APICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVL  152 (263)
T ss_dssp             SSCEEEEECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCTTCSGGGEEECGGGCEEECSCC------
T ss_pred             CceEEEEEecCCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHhhhccceeecccchhheeecCCCCeEecccchheecc
Confidence            778999999986 5566666666779999999999999999999999999999999999999999999999999997654


Q ss_pred             CCC-CCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCCCCCCcccCCC
Q 035861          169 SPL-KPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA-KKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLS  246 (332)
Q Consensus       169 ~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (332)
                      ... .......||+.|+|||++.+ ..++.++||||||+++|||+| |.+||...+..+....+.......         
T Consensus       153 ~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~k~DVwS~Gvil~el~t~~~~~~~~~~~~~~~~~i~~~~~~~---------  222 (263)
T d1sm2a_         153 DDQYTSSTGTKFPVKWASPEVFSF-SRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLY---------  222 (263)
T ss_dssp             ------------CTTSCCHHHHTT-CCCCHHHHHHHHHHHHHHHHTTSCCTTCSCCHHHHHHHHHHTCCCC---------
T ss_pred             CCCceeecceecCcccCChHHhcC-CCCCchhhhcchHHHHHHHHHCCCCCCCCCCHHHHHHHHHhcCCCC---------
Confidence            332 22334578899999999987 678999999999999999999 566676666666666655432111         


Q ss_pred             CCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcC
Q 035861          247 ELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNH  306 (332)
Q Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h  306 (332)
                                                 .+..+++++.+|+.+||+.||++|||++||++|
T Consensus       223 ---------------------------~p~~~~~~l~~li~~cl~~~p~~Rps~~~il~~  255 (263)
T d1sm2a_         223 ---------------------------KPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQ  255 (263)
T ss_dssp             ---------------------------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ---------------------------CccccCHHHHHHHHHHccCCHhHCcCHHHHHHH
Confidence                                       122368899999999999999999999999986


No 34 
>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=100.00  E-value=1e-54  Score=369.12  Aligned_cols=262  Identities=22%  Similarity=0.346  Sum_probs=207.9

Q ss_pred             cchhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEc
Q 035861            8 RSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMD   87 (332)
Q Consensus         8 ~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~   87 (332)
                      ..-++|++++.||+|+||+||+|.+..+++.||||++...........     ..+.+|+.+++.++||||+++++++..
T Consensus         4 ~l~drY~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~-----~~~~~E~~~l~~~~hpniv~~~~~~~~   78 (277)
T d1o6ya_           4 HLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFY-----LRFRREAQNAAALNHPAIVAVYDTGEA   78 (277)
T ss_dssp             EETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHH-----HHHHHHHHHHHTCCCTTBCCEEEEEEE
T ss_pred             CccceeEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHH-----HHHHHHHHHHHhcCCCCCCcccceeee
Confidence            445689999999999999999999999999999999976543322211     246799999999999999999999865


Q ss_pred             CC---CeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccc
Q 035861           88 DH---DSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMS  164 (332)
Q Consensus        88 ~~---~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~  164 (332)
                      ..   ...|+||||++|+.+.......+.+++.+++.++.||+.||+|||++||+||||||+||+++.++.++++|||.+
T Consensus        79 ~~~~~~~~~lvmE~~~g~~L~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~iiHrDiKP~NIll~~~~~~~l~d~~~~  158 (277)
T d1o6ya_          79 ETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIA  158 (277)
T ss_dssp             ECSSSEEEEEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTSCEEECCCTTC
T ss_pred             ccCCCceEEEEEECCCCCEehhhhcccCCCCHHHHHHHHHHHHHHHHHHHhCCccCccccCcccccCccccceeehhhhh
Confidence            43   358999999997655555555788999999999999999999999999999999999999999999999999988


Q ss_pred             cccCCC---CCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCc
Q 035861          165 RQYGSP---LKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETI  241 (332)
Q Consensus       165 ~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~  241 (332)
                      ......   ........||+.|+|||++.+ ..++.++||||||+++|+|+||..||...+..+...++......++.. 
T Consensus       159 ~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~-~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~~~~~~~~~~~~-  236 (277)
T d1o6ya_         159 RAIADSGNSVTQTAAVIGTAQYLSPEQARG-DSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSA-  236 (277)
T ss_dssp             EECC----------------TTCCHHHHTT-CCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCCGGG-
T ss_pred             hhhccccccccccccccCcccccCHHHHcC-CCCCcceecccchHHHHHHHhCCCCCCCcCHHHHHHHHHhcCCCCCch-
Confidence            654322   123445679999999999987 678999999999999999999999999988887777766543322211 


Q ss_pred             ccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCC-CHHHHhcCCCC
Q 035861          242 WPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRI-TVDDALNHYWF  309 (332)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp-s~~ell~hp~f  309 (332)
                                                      ..+.+|+++.+||.+||++||++|| |++++ .|+|.
T Consensus       237 --------------------------------~~~~~s~~l~~li~~~L~~dp~~R~~sa~~l-~~~l~  272 (277)
T d1o6ya_         237 --------------------------------RHEGLSADLDAVVLKALAKNPENRYQTAAEM-RADLV  272 (277)
T ss_dssp             --------------------------------TSSSCCHHHHHHHHHHTCSSGGGSCSSHHHH-HHHHH
T ss_pred             --------------------------------hccCCCHHHHHHHHHHccCCHhHCHhHHHHH-HHHHH
Confidence                                            2234799999999999999999999 55555 45554


No 35 
>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=100.00  E-value=2.2e-54  Score=367.82  Aligned_cols=250  Identities=22%  Similarity=0.342  Sum_probs=203.9

Q ss_pred             hhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCC
Q 035861           10 VFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDH   89 (332)
Q Consensus        10 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~   89 (332)
                      .++|++.+.||+|+||+||+|.+..+++.||||++.......         ..+.+|+.++++++||||+++++++.+ .
T Consensus        16 ~~~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~---------~~~~~E~~il~~l~HpnIv~~~~~~~~-~   85 (287)
T d1opja_          16 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV---------EEFLKEAAVMKEIKHPNLVQLLGVCTR-E   85 (287)
T ss_dssp             GGGEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTTCSCH---------HHHHHHHHHHHHCCCTTBCCEEEEECS-S
T ss_pred             HHHeEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCccchH---------HHHHHHHHHHHhCCCCCEecCCccEee-C
Confidence            458899999999999999999999999999999986543221         246799999999999999999999954 4


Q ss_pred             CeEEEEcccccc-cHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeeccccccc
Q 035861           90 DSVYMVMEYMEH-DLKWLMESM-KQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQY  167 (332)
Q Consensus        90 ~~~~lv~e~~~~-~l~~~~~~~-~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~  167 (332)
                      ...++||||+++ ++.+.+... ...+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++..
T Consensus        86 ~~~~iv~E~~~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~~~iiHrDlKp~NILl~~~~~~Kl~DFG~a~~~  165 (287)
T d1opja_          86 PPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM  165 (287)
T ss_dssp             SSCEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCCCTTTC
T ss_pred             CeeEEEeecccCcchHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHCCcccCccccCeEEECCCCcEEEccccceeec
Confidence            778999999995 566655543 467899999999999999999999999999999999999999999999999999876


Q ss_pred             CCCCC-CCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccCCC
Q 035861          168 GSPLK-PYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLS  246 (332)
Q Consensus       168 ~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (332)
                      ..... ......|++.|+|||++.+ ..++.++||||||+++|+|++|..||..........+.....            
T Consensus       166 ~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~~~~~~~~i~~~------------  232 (287)
T d1opja_         166 TGDTYTAHAGAKFPIKWTAPESLAY-NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKD------------  232 (287)
T ss_dssp             CSSSSEEETTEEECGGGCCHHHHHH-CCCSHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTT------------
T ss_pred             CCCCceeeccccccccccChHHHcC-CCCCchhhhhhHHHHHHHHHhCCCCCCCcchHHHHHHHHhcC------------
Confidence            43322 2334457889999999987 678999999999999999999777665544443333333221            


Q ss_pred             CCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhc
Q 035861          247 ELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALN  305 (332)
Q Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~  305 (332)
                                             .....++.+++++.+||.+||+.||++|||++||++
T Consensus       233 -----------------------~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ei~~  268 (287)
T d1opja_         233 -----------------------YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ  268 (287)
T ss_dssp             -----------------------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             -----------------------CCCCCCccchHHHHHHHHHHcCCCHhHCcCHHHHHH
Confidence                                   111122347899999999999999999999999976


No 36 
>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.2e-54  Score=381.26  Aligned_cols=295  Identities=34%  Similarity=0.533  Sum_probs=220.0

Q ss_pred             chhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEc-
Q 035861            9 SVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMD-   87 (332)
Q Consensus         9 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-   87 (332)
                      .+++|++++.||+|+||+||+|++..+|+.||||++..........      ..+.+|+.++++++||||+++++++.. 
T Consensus        15 i~~~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~------~~~~~Ei~il~~l~hpnIv~~~~~f~~~   88 (355)
T d2b1pa1          15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHA------KRAYRELVLMKCVNHKNIISLLNVFTPQ   88 (355)
T ss_dssp             EETTEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHH------HHHHHHHHHHHHCCCTTBCCCSEEECSC
T ss_pred             ecCCeEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhcCHHHH------HHHHHHHHHHHhcCCCCeeEEEEEEecc
Confidence            3478999999999999999999999999999999997654332211      146799999999999999999999853 


Q ss_pred             ----CCCeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeeccc
Q 035861           88 ----DHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGM  163 (332)
Q Consensus        88 ----~~~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~  163 (332)
                          .....|+||||+.|+++..+   ...+++..++.++.||+.||+|||++||+|+||||+||+++.++.++++|||.
T Consensus        89 ~~~~~~~~~~iv~Ey~~~~l~~~~---~~~~~~~~i~~~~~qil~gl~~LH~~giiHrDlKP~Nil~~~~~~~kl~df~~  165 (355)
T d2b1pa1          89 KTLEEFQDVYLVMELMDANLCQVI---QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGL  165 (355)
T ss_dssp             CSTTTCCEEEEEEECCSEEHHHHH---TSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC
T ss_pred             cccccCceeEEEEeccchHHHHhh---hcCCCHHHHHHHHHHHHHHHHHhhhcccccccCCccccccccccceeeechhh
Confidence                33679999999999987765   35689999999999999999999999999999999999999999999999998


Q ss_pred             ccccCCCCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCccc
Q 035861          164 SRQYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWP  243 (332)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  243 (332)
                      +..... ........+|+.|+|||++.+ ..++.++||||+|+++|+|++|..||.+.+.......+......+....+.
T Consensus       166 ~~~~~~-~~~~~~~~~t~~y~aPE~l~~-~~~~~~~DiwSlG~~l~ell~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~  243 (355)
T d2b1pa1         166 ARTAGT-SFMMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMK  243 (355)
T ss_dssp             ----------------CCTTCCHHHHTT-CCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHT
T ss_pred             hhcccc-ccccccccccccccChhhhcC-CCCCCCcccccccchHHHHhhCCCCCCCCCHHHHHHHHHHhccCCCHHHHH
Confidence            876543 233455678999999999987 678999999999999999999999999999888888888877666555444


Q ss_pred             CCCCCcccccccc-CCchhhhhhhCCCCc----cCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCCC
Q 035861          244 GLSELPGAKANFA-KQPYNLLRKRFPAAS----FTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVPL  314 (332)
Q Consensus       244 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~----~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~  314 (332)
                      ............. ...........+...    .......++++++||++||..||++|||++|+|+||||+.+..
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~Hpw~~~~~~  319 (355)
T d2b1pa1         244 KLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWYD  319 (355)
T ss_dssp             TSCHHHHHHHHTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTGGGCC
T ss_pred             HhhhhHHHHhhcCccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcCcccCCCCC
Confidence            3322111000000 000000000011100    0011124678899999999999999999999999999998654


No 37 
>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=4.5e-54  Score=377.41  Aligned_cols=300  Identities=33%  Similarity=0.561  Sum_probs=229.8

Q ss_pred             hhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEc--
Q 035861           10 VFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMD--   87 (332)
Q Consensus        10 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--   87 (332)
                      .++|++++.||+|+||+||+|++..+|+.||||++..........      ..+.+|+.++++++|||++++++++..  
T Consensus        17 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~------~~~~~Ei~il~~l~h~~iv~~~~~~~~~~   90 (348)
T d2gfsa1          17 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA------KRTYRELRLLKHMKHENVIGLLDVFTPAR   90 (348)
T ss_dssp             ETTEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHH------HHHHHHHHHHHHCCCTTBCCCSEEECSCS
T ss_pred             CCCeEEEEEEecCCCeEEEEEEECCCCCEEEEEEECchhcChHHH------HHHHHHHHHHHhcCCCCeeeEEEEEeecc
Confidence            368999999999999999999999999999999997544322211      146789999999999999999999843  


Q ss_pred             ---CCCeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccc
Q 035861           88 ---DHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMS  164 (332)
Q Consensus        88 ---~~~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~  164 (332)
                         +...+++++++.+|+|.+.+.  .+.+++..++.++.||+.||+|||++||+||||||+||+++.++.++++|||.+
T Consensus        91 ~~~~~~~~~i~~~~~gg~L~~~~~--~~~l~e~~~~~i~~qil~aL~~LH~~giiHrDiKp~NILi~~~~~~kl~dfg~a  168 (348)
T d2gfsa1          91 SLEEFNDVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA  168 (348)
T ss_dssp             STTTCCCCEEEEECCSEEHHHHHT--TCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCC---
T ss_pred             ccccCceEEEEEeecCCchhhhcc--cccccHHHHHHHHHHHHHHHHHHHhCCCcccccCCccccccccccccccccchh
Confidence               223456666666567666553  457999999999999999999999999999999999999999999999999998


Q ss_pred             cccCCCCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcccC
Q 035861          165 RQYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWPG  244 (332)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (332)
                      ....   .......|++.|+|||.+.+...++.++|+||||+++|+|++|..||.+.+.......+....+.+.......
T Consensus       169 ~~~~---~~~~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~  245 (348)
T d2gfsa1         169 RHTD---DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK  245 (348)
T ss_dssp             -CCT---GGGSSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTT
T ss_pred             cccC---cccccccccccccCchhhcCCccCCcccchhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhh
Confidence            7653   2334567899999999988767789999999999999999999999999999988888888776665543332


Q ss_pred             CCCCccccc--cccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCCCCCCCCCCC
Q 035861          245 LSELPGAKA--NFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVPLPKSKDFMP  322 (332)
Q Consensus       245 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~~~~~~~~  322 (332)
                      .........  ..........        ......+++++++||.+||..||.+|||++|+|+||||+++..++......
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~s~~~~dli~~mL~~dP~~R~ta~elL~Hp~f~~~~~~~~~~~~~  317 (348)
T d2gfsa1         246 ISSESARNYIQSLTQMPKMNF--------ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVAD  317 (348)
T ss_dssp             CCCHHHHHHHTTSCCCCCCCH--------HHHSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTCCTTSCCCCC
T ss_pred             ccchhhhhhhhhcccCCCcch--------hhhcCCCCHHHHHHHHHHCcCChhhCcCHHHHhcCHhhCCCCCCccCCCCC
Confidence            221110000  0000000000        001234789999999999999999999999999999999988777666555


Q ss_pred             CCCCcc
Q 035861          323 TFPPQH  328 (332)
Q Consensus       323 ~~~~~~  328 (332)
                      ++...+
T Consensus       318 ~~~~~~  323 (348)
T d2gfsa1         318 PYDQSF  323 (348)
T ss_dssp             CCCCGG
T ss_pred             CCCCcc
Confidence            554443


No 38 
>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}
Probab=100.00  E-value=1.4e-54  Score=377.32  Aligned_cols=289  Identities=25%  Similarity=0.448  Sum_probs=215.4

Q ss_pred             chhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCC-CCCeeeeeeeEEc
Q 035861            9 SVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFD-HPSIVNVKEVVMD   87 (332)
Q Consensus         9 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~   87 (332)
                      ..++|++++.||+|+||+||+|++..+++.||||++....           ...+.+|+.+++.+. ||||+.+++++..
T Consensus        33 ~~d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~~-----------~~~~~~Ei~il~~l~~hpnIv~~~~~~~~  101 (328)
T d3bqca1          33 NQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK-----------KKKIKREIKILENLRGGPNIITLADIVKD  101 (328)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSSC-----------HHHHHHHHHHHHHHTTSTTBCCEEEEEEC
T ss_pred             CCcCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEECHHH-----------HHHHHHHHHHHHhccCCCCCcEEEEEEEe
Confidence            5578999999999999999999999999999999986422           114568999999995 9999999999853


Q ss_pred             -CCCeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCC-cEEEeeccccc
Q 035861           88 -DHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQG-VLKICDFGMSR  165 (332)
Q Consensus        88 -~~~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~-~~~l~df~~~~  165 (332)
                       .....++||||++++.+..   ..+.+++..++.++.||+.||+|||++||+|+||||+|||++.++ .++|+|||.+.
T Consensus       102 ~~~~~~~~v~e~~~~~~L~~---~~~~l~e~~i~~i~~qil~aL~~LH~~gIvHrDiKp~NILi~~~~~~vkl~DFG~a~  178 (328)
T d3bqca1         102 PVSRTPALVFEHVNNTDFKQ---LYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE  178 (328)
T ss_dssp             TTTCSEEEEEECCCSCBGGG---TTTSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCGGGCE
T ss_pred             cCCCceeEEEeecCCCcHHH---HhcCCCHHHHHHHHHHHHHHHHHHhhcccccccccccceEEcCCCCeeeecccccce
Confidence             3467999999999765432   246799999999999999999999999999999999999999765 69999999998


Q ss_pred             ccCCCCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCh-HHHHHHHHHHcCCCCCCcccC
Q 035861          166 QYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTE-VDQIDKIFKTLGTPTETIWPG  244 (332)
Q Consensus       166 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~-~~~~~~~~~~~~~~~~~~~~~  244 (332)
                      ..... .......+|+.|+|||.+.+...++.++|+||+|+++|++++|..||..... .+....+....+.+....+..
T Consensus       179 ~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~~~~~i~~~~g~~~~~~~~~  257 (328)
T d3bqca1         179 FYHPG-QEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYID  257 (328)
T ss_dssp             ECCTT-CCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHH
T ss_pred             eccCC-CcccccccCccccCcccccCCCCCCcccchhhhhhhhHHhccCCCCCCCCchhHHHHHHHHHHHCCchhhhhhh
Confidence            76433 3345667899999999998867789999999999999999999999976543 333333333322111000000


Q ss_pred             ---CCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCCCC
Q 035861          245 ---LSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVPLP  315 (332)
Q Consensus       245 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~  315 (332)
                         ......................   ........+++++++||++||..||++|||++|+|+||||+++.+.
T Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~L~Hp~F~~v~~~  328 (328)
T d3bqca1         258 KYNIELDPRFNDILGRHSRKRWERF---VHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVVKD  328 (328)
T ss_dssp             HTTCCCCGGGGGTCCCCCCCCGGGG---CCTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTSCCC
T ss_pred             hcccccCcccchhcccccccchhhc---ccccccccCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCCCCCC
Confidence               0000000000000000000000   1111223378899999999999999999999999999999998763


No 39 
>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.1e-54  Score=367.34  Aligned_cols=253  Identities=21%  Similarity=0.354  Sum_probs=204.5

Q ss_pred             hhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCC
Q 035861           10 VFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDH   89 (332)
Q Consensus        10 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~   89 (332)
                      .++|++++.||+|+||+||+|.++ ++..||||++.......         ..+.+|+.++++++||||+++++++ .+ 
T Consensus        12 ~~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~---------~~~~~E~~~l~~l~HpnIv~~~g~~-~~-   79 (272)
T d1qpca_          12 RETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQGSMSP---------DAFLAEANLMKQLQHQRLVRLYAVV-TQ-   79 (272)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTSSCH---------HHHHHHHHHHHHCCCTTBCCEEEEE-CS-
T ss_pred             HHHeEEeEEEecCCCcEEEEEEEC-CCCEEEEEEEccCcCCH---------HHHHHHHHHHHhCCCCCEeEEEeee-cc-
Confidence            368999999999999999999986 56789999986543222         2578999999999999999999987 44 


Q ss_pred             CeEEEEcccccccHHHH-HHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeeccccccc
Q 035861           90 DSVYMVMEYMEHDLKWL-MESM-KQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQY  167 (332)
Q Consensus        90 ~~~~lv~e~~~~~l~~~-~~~~-~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~  167 (332)
                      ...++||||++++.+.. +... ...+++..+..++.||+.||+|||++||+||||||+||+++.++.+||+|||+++..
T Consensus        80 ~~~~iv~Ey~~~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~~~ivHrDiKp~NIll~~~~~~Kl~DFGla~~~  159 (272)
T d1qpca_          80 EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLI  159 (272)
T ss_dssp             SSCEEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred             CCeEEEEEeCCCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccchhheeeecccceeeccccceEEc
Confidence            44689999999654443 3222 236999999999999999999999999999999999999999999999999999876


Q ss_pred             CCCC-CCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCC-CCCCCCChHHHHHHHHHHcCCCCCCcccCC
Q 035861          168 GSPL-KPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKK-PLFSGTTEVDQIDKIFKTLGTPTETIWPGL  245 (332)
Q Consensus       168 ~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~-~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (332)
                      .... .......|++.|+|||++.+ ..++.++||||||+++|||+||. +||...+..+....+......         
T Consensus       160 ~~~~~~~~~~~~gt~~y~APE~~~~-~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~~~~~~~~i~~~~~~---------  229 (272)
T d1qpca_         160 EDNEYTAREGAKFPIKWTAPEAINY-GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRM---------  229 (272)
T ss_dssp             SSSCEECCTTCCCCTTTSCHHHHHH-CEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCC---------
T ss_pred             cCCccccccccCCcccccChHHHhC-CCCCchhhhhhhHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCC---------
Confidence            4332 23344578899999999986 56899999999999999999965 455555655555554432111         


Q ss_pred             CCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhc--CCCCCC
Q 035861          246 SELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALN--HYWFHE  311 (332)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~--hp~f~~  311 (332)
                                                 ..+..+++++.+|+.+||+.||++|||+++|++  |+||+.
T Consensus       230 ---------------------------~~p~~~~~~l~~li~~cl~~~P~~Rpt~~ei~~~L~~~fts  270 (272)
T d1qpca_         230 ---------------------------VRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA  270 (272)
T ss_dssp             ---------------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             ---------------------------CCcccChHHHHHHHHHHcCCCHhHCcCHHHHHHHhhhhhhc
Confidence                                       112337899999999999999999999999998  788864


No 40 
>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=9.2e-55  Score=375.98  Aligned_cols=281  Identities=24%  Similarity=0.405  Sum_probs=220.8

Q ss_pred             chhcccccccccccCcEEEEEEEEC---CCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCC-CCeeeeeee
Q 035861            9 SVFEFEKLNKISEGTYGIVYRARDK---KSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDH-PSIVNVKEV   84 (332)
Q Consensus         9 ~~~~y~~~~~lg~g~~g~v~~~~~~---~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h-~~i~~~~~~   84 (332)
                      .+++|++++.||+|+||+||+|++.   .+|+.||||++.........    .....+.+|+.++++++| |||+.+++.
T Consensus        22 ~l~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~----~~~~~~~~E~~il~~l~h~pnIv~~~~~   97 (322)
T d1vzoa_          22 GIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKA----KTTEHTRTERQVLEHIRQSPFLVTLHYA   97 (322)
T ss_dssp             CGGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEE----SSGGGCCCHHHHHHHHHTCTTBCCEEEE
T ss_pred             chhceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccch----HHHHHHHHHHHHHHhccCCCeEEEeeee
Confidence            4689999999999999999999873   46899999999764332211    112256789999999977 799999999


Q ss_pred             EEcCCCeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccc
Q 035861           85 VMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMS  164 (332)
Q Consensus        85 ~~~~~~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~  164 (332)
                      +.+ ....+++|||+.|+.+.......+.+++..+..++.||+.||+|||++||+|+||||+||+++.++.++|+|||++
T Consensus        98 ~~~-~~~~~~v~e~~~~~~L~~~i~~~~~~~e~~~~~~~~Qi~~al~~lH~~~ivHrDiKp~Nill~~~~~vkL~DFG~a  176 (322)
T d1vzoa_          98 FQT-ETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLS  176 (322)
T ss_dssp             EEE-TTEEEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEESCSSEE
T ss_pred             ecc-CCceeeeeecccccHHHHHHHhcccccHHHHHHHHHHHHHHHHHhhcCCEEeccCCccceeecCCCCEEEeeccch
Confidence            844 4789999999997555444555778899999999999999999999999999999999999999999999999999


Q ss_pred             cccCCC-CCCCccccccccccchhhhcCC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCcc
Q 035861          165 RQYGSP-LKPYTSLVVTLWYRAPELLLGA-KKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIW  242 (332)
Q Consensus       165 ~~~~~~-~~~~~~~~~~~~y~aPE~~~~~-~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~  242 (332)
                      ...... ........|++.|+|||.+... ..++.++||||||+++|+|++|..||...+..+....+.+.....     
T Consensus       177 ~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~~~~i~~~~~~~-----  251 (322)
T d1vzoa_         177 KEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKS-----  251 (322)
T ss_dssp             EECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHC-----
T ss_pred             hhhcccccccccccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcccC-----
Confidence            765322 2234456789999999999753 357889999999999999999999998765554444444321100     


Q ss_pred             cCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCC-----CHHHHhcCCCCCCCCCCCC
Q 035861          243 PGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRI-----TVDDALNHYWFHEVPLPKS  317 (332)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp-----s~~ell~hp~f~~~~~~~~  317 (332)
                                                  ....++.+|+++++||.+||++||++||     +++|+++||||+++++.+.
T Consensus       252 ----------------------------~~~~~~~~s~~~~~li~~~l~~dP~~R~s~~~~t~~eil~Hpff~~i~~~~l  303 (322)
T d1vzoa_         252 ----------------------------EPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKINWDDL  303 (322)
T ss_dssp             ----------------------------CCCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGTTCCHHHH
T ss_pred             ----------------------------CCCCcccCCHHHHHHHHHHcccCHHHcCCCCcccHHHHHcCHhhcCCCHHHH
Confidence                                        0111234899999999999999999999     4899999999999886554


Q ss_pred             --CCCCCCCCCc
Q 035861          318 --KDFMPTFPPQ  327 (332)
Q Consensus       318 --~~~~~~~~~~  327 (332)
                        +...+++.|.
T Consensus       304 ~~~~~~~p~~p~  315 (322)
T d1vzoa_         304 AAKKVPAPFKPV  315 (322)
T ss_dssp             HTTCSCCSCCCC
T ss_pred             HhCCCCcCCCCC
Confidence              3455666553


No 41 
>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=4.3e-54  Score=365.26  Aligned_cols=258  Identities=24%  Similarity=0.317  Sum_probs=208.7

Q ss_pred             hccccccc-ccccCcEEEEEEEECC--CCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEc
Q 035861           11 FEFEKLNK-ISEGTYGIVYRARDKK--SGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMD   87 (332)
Q Consensus        11 ~~y~~~~~-lg~g~~g~v~~~~~~~--~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~   87 (332)
                      ++|.+.+. ||+|+||+||+|.+..  ++..||||++.......  .     ...+.+|+.++++++||||+++++++. 
T Consensus         8 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~--~-----~~~~~~E~~il~~l~HpnIv~l~g~~~-   79 (285)
T d1u59a_           8 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKA--D-----TEEMMREAQIMHQLDNPYIVRLIGVCQ-   79 (285)
T ss_dssp             GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHH--H-----HHHHHHHHHHHHHCCCTTBCCEEEEEE-
T ss_pred             cCeEECCcEEecccCeEEEEEEEecCCCcEEEEEEEEChhcCHH--H-----HHHHHHHHHHHHhCCCCCEeeEeeeec-
Confidence            46778874 9999999999998754  45579999986543211  1     125679999999999999999999884 


Q ss_pred             CCCeEEEEcccccc-cHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccc
Q 035861           88 DHDSVYMVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQ  166 (332)
Q Consensus        88 ~~~~~~lv~e~~~~-~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~  166 (332)
                      + ...|+||||++| ++.+.+...+..+++..+..++.||+.||+|||++||+||||||+||+++.++.+||+|||+++.
T Consensus        80 ~-~~~~lvmE~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~  158 (285)
T d1u59a_          80 A-EALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKA  158 (285)
T ss_dssp             S-SSEEEEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETTEEEECCCTTCEE
T ss_pred             c-CeEEEEEEeCCCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHhCCeecCcCchhheeeccCCceeeccchhhhc
Confidence            3 457899999996 55555566567899999999999999999999999999999999999999999999999999987


Q ss_pred             cCCCCC---CCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCCCCCCcc
Q 035861          167 YGSPLK---PYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA-KKPLFSGTTEVDQIDKIFKTLGTPTETIW  242 (332)
Q Consensus       167 ~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~  242 (332)
                      ......   ......||+.|+|||++.+ ..++.++||||||+++|||+| |..||...+..+....+.+...       
T Consensus       159 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~~~~~~~i~~~~~-------  230 (285)
T d1u59a_         159 LGADDSYYTARSAGKWPLKWYAPECINF-RKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKR-------  230 (285)
T ss_dssp             CTTCSCEECCCCSSCCCGGGCCHHHHHH-CEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHTTCC-------
T ss_pred             ccccccccccccccccCccccChHHHhC-CCCCccchhhcchHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC-------
Confidence            643222   2234568899999999987 578999999999999999998 8999998887766665543321       


Q ss_pred             cCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHH---hcCCCCCCCCC
Q 035861          243 PGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDA---LNHYWFHEVPL  314 (332)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~el---l~hp~f~~~~~  314 (332)
                                                   ...++.+++++.+||.+||+.||++|||+.+|   |+|+|+.....
T Consensus       231 -----------------------------~~~p~~~~~~l~~li~~cl~~~p~~RPs~~~i~~~L~~~~~~~~~~  276 (285)
T d1u59a_         231 -----------------------------MECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLASK  276 (285)
T ss_dssp             -----------------------------CCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHHHTT
T ss_pred             -----------------------------CCCCCcCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHHhhhc
Confidence                                         11234489999999999999999999999888   67888754333


No 42 
>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.3e-53  Score=373.15  Aligned_cols=290  Identities=37%  Similarity=0.632  Sum_probs=223.8

Q ss_pred             hcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCC-
Q 035861           11 FEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDH-   89 (332)
Q Consensus        11 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-   89 (332)
                      .+|++++.||+|+||+||+|.++.+|+.||||++.......  .     ...+++|+.++++++||||+++++++..+. 
T Consensus         8 ~rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~--~-----~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~   80 (345)
T d1pmea_           8 PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQT--Y-----CQRTLREIKILLRFRHENIIGINDIIRAPTI   80 (345)
T ss_dssp             TTEEEEEECC---CCCEEEEEETTTCSEEEEEEECCTTCHH--H-----HHHHHHHHHHHHHCCCTTBCCCCEEECCSST
T ss_pred             CCeEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehhcChH--H-----HHHHHHHHHHHHHcCCCCCCcEEEEEeeccc
Confidence            47999999999999999999999999999999997533211  1     124678999999999999999999985432 


Q ss_pred             ---CeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccc
Q 035861           90 ---DSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQ  166 (332)
Q Consensus        90 ---~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~  166 (332)
                         ..+|++++.++|+|.+.+..  ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++..
T Consensus        81 ~~~~~~~l~~~~~~g~L~~~l~~--~~l~~~~i~~i~~qil~al~yLH~~~iiHRDIKp~NILl~~~~~~kl~DfG~a~~  158 (345)
T d1pmea_          81 EQMKDVYLVTHLMGADLYKLLKT--QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV  158 (345)
T ss_dssp             TTCCCEEEEEECCCEEHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred             cccceEEEEEeecCCchhhhhhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCcceEEECCCCCEEEcccCceee
Confidence               34778888777888777654  4799999999999999999999999999999999999999999999999999876


Q ss_pred             cCCCC---CCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCCccc
Q 035861          167 YGSPL---KPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETIWP  243 (332)
Q Consensus       167 ~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  243 (332)
                      .....   .......|++.|+|||++.....++.++||||+|+++|+|++|..||...+..+...........+......
T Consensus       159 ~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  238 (345)
T d1pmea_         159 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLN  238 (345)
T ss_dssp             CCGGGCBCCTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHH
T ss_pred             ccCCCccceeeccccccceechHHHhhcCCCCCchhhhhccCceehHHhhCCCCCCCCCHHHHHHHHhhhccCCChhhhh
Confidence            53221   223456789999999999776778999999999999999999999999988888777777665555433222


Q ss_pred             CCCCCccccccccCCchhhhhhhCCCC----ccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcCCCCCCCCCCCCCC
Q 035861          244 GLSELPGAKANFAKQPYNLLRKRFPAA----SFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFHEVPLPKSKD  319 (332)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~~~~~  319 (332)
                      ........          ......+..    .....+.+++++++||.+||+.||.+|||++|+|+||||++...+....
T Consensus       239 ~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~ta~e~L~hpf~~~~~~~~~~~  308 (345)
T d1pmea_         239 CIINLKAR----------NYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEP  308 (345)
T ss_dssp             TCCCHHHH----------HHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTTCCGGGSC
T ss_pred             hhhhhhhh----------cccccCCccCCCCHHHhCCCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhccCCCCccCc
Confidence            11111000          000000000    0011234788999999999999999999999999999999877655443


No 43 
>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=3.7e-54  Score=364.61  Aligned_cols=249  Identities=26%  Similarity=0.349  Sum_probs=198.6

Q ss_pred             ccccccCcEEEEEEEEC--CCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCCCeEEE
Q 035861           17 NKISEGTYGIVYRARDK--KSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDHDSVYM   94 (332)
Q Consensus        17 ~~lg~g~~g~v~~~~~~--~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~l   94 (332)
                      ++||+|+||+||+|.+.  .+++.||||++.........      ...+.+|+.++++++||||+++++++ ++ ...++
T Consensus        13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~------~~~~~~E~~il~~l~HpnIv~~~g~~-~~-~~~~l   84 (277)
T d1xbba_          13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPAL------KDELLAEANVMQQLDNPYIVRMIGIC-EA-ESWML   84 (277)
T ss_dssp             EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHH------HHHHHHHHHHHHTCCCTTBCCEEEEE-ES-SSEEE
T ss_pred             CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHH------HHHHHHHHHHHHhCCCCCCceEEEEe-cc-CCEEE
Confidence            46999999999999864  45678999999654322211      12578999999999999999999988 44 45789


Q ss_pred             EcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccCCCCC--
Q 035861           95 VMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLK--  172 (332)
Q Consensus        95 v~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~~~~~--  172 (332)
                      ||||++|+.+..+......+++..+..++.||+.||+|||++||+||||||+||+++.++.+||+|||+++.......  
T Consensus        85 vmE~~~~g~L~~~l~~~~~l~~~~~~~i~~qi~~gl~ylH~~~iiHrDlKp~Nill~~~~~~kl~DFGla~~~~~~~~~~  164 (277)
T d1xbba_          85 VMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY  164 (277)
T ss_dssp             EEECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEE
T ss_pred             EEEcCCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHhhHHhCCcccCCCcchhhcccccCcccccchhhhhhcccccccc
Confidence            999999755555555578899999999999999999999999999999999999999999999999999986543322  


Q ss_pred             -CCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCCCCCCcccCCCCCcc
Q 035861          173 -PYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA-KKPLFSGTTEVDQIDKIFKTLGTPTETIWPGLSELPG  250 (332)
Q Consensus       173 -~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (332)
                       ......||+.|+|||.+.+ ..++.++||||||+++|||+| |..||.+.+..+....+.+...               
T Consensus       165 ~~~~~~~gt~~y~APE~l~~-~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~~~~~~i~~~~~---------------  228 (277)
T d1xbba_         165 KAQTHGKWPVKWYAPECINY-YKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGER---------------  228 (277)
T ss_dssp             EC----CCCGGGCCHHHHHH-CEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCC---------------
T ss_pred             ccccccCCCceecCchhhcC-CCCCchhhhccchhhhhHHhhCCCCCCCCCCHHHHHHHHHcCCC---------------
Confidence             1233568899999999987 678999999999999999998 8999998887766665543211               


Q ss_pred             ccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHH---hcCCCCC
Q 035861          251 AKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDA---LNHYWFH  310 (332)
Q Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~el---l~hp~f~  310 (332)
                                           ...++.+++++.+||.+||+.||++|||+++|   |+|+|+.
T Consensus       229 ---------------------~~~p~~~~~~~~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~  270 (277)
T d1xbba_         229 ---------------------MGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYD  270 (277)
T ss_dssp             ---------------------CCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHH
T ss_pred             ---------------------CCCCcccCHHHHHHHHHHcCCCHhHCcCHHHHHHHhhCHHhh
Confidence                                 11223478999999999999999999999998   4566553


No 44 
>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=100.00  E-value=2.8e-53  Score=363.09  Aligned_cols=253  Identities=25%  Similarity=0.377  Sum_probs=196.2

Q ss_pred             chhcccccccccccCcEEEEEEEECCCCc---EEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeE
Q 035861            9 SVFEFEKLNKISEGTYGIVYRARDKKSGE---IVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVV   85 (332)
Q Consensus         9 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~---~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~   85 (332)
                      ..++|++.+.||+|+||+||+|.+..+++   .||||.+........       ...+.+|+.++++++||||+++++++
T Consensus        24 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~-------~~~~~~E~~~l~~l~HpnIv~l~g~~   96 (299)
T d1jpaa_          24 DISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQ-------RRDFLSEASIMGQFDHPNVIHLEGVV   96 (299)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSCCHHH-------HHHHHHHHHHHTTCCCTTBCCEEEEE
T ss_pred             ChhhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccCHHH-------HHHHHHHHHHHHhCCCCCCccEEEEE
Confidence            35689999999999999999999976664   578887754322111       12467999999999999999999999


Q ss_pred             EcCCCeEEEEcccccccH-HHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccc
Q 035861           86 MDDHDSVYMVMEYMEHDL-KWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMS  164 (332)
Q Consensus        86 ~~~~~~~~lv~e~~~~~l-~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~  164 (332)
                      .. ....++||||++|+. .+.+....+.+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++
T Consensus        97 ~~-~~~~~iv~Ey~~~g~L~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHrDlKp~NILl~~~~~~Kl~DFGla  175 (299)
T d1jpaa_          97 TK-STPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLS  175 (299)
T ss_dssp             CS-SSSCEEEEECCTTEEHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC---
T ss_pred             ee-CCEEEEEEEecCCCcceeeeccccCCCCHHHHHHHHHHHHHHHHHHhhCCCccCccccceEEECCCCcEEECCcccc
Confidence            44 477899999999754 4445555667999999999999999999999999999999999999999999999999999


Q ss_pred             cccCCCCC-----CCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCCCC
Q 035861          165 RQYGSPLK-----PYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA-KKPLFSGTTEVDQIDKIFKTLGTPT  238 (332)
Q Consensus       165 ~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~  238 (332)
                      +.......     ......+|+.|+|||.+.+ ..++.++||||||+++|||+| |..||...+..+....+......  
T Consensus       176 ~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~~~~~~~~i~~~~~~--  252 (299)
T d1jpaa_         176 RFLEDDTSDPTYTSALGGKIPIRWTAPEAIQY-RKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRL--  252 (299)
T ss_dssp             --------------------CGGGSCHHHHHS-CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCC--
T ss_pred             eEccCCCCcceeeecccccCCccccCHHHHhc-CCCCcccccccchHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC--
Confidence            86533211     1223457889999999987 678999999999999999998 89999988887776666543211  


Q ss_pred             CCcccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcC
Q 035861          239 ETIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNH  306 (332)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h  306 (332)
                                                        ..+..++.++.+||.+||+.||++|||+.||+++
T Consensus       253 ----------------------------------~~~~~~~~~l~~li~~cl~~~P~~RPs~~ei~~~  286 (299)
T d1jpaa_         253 ----------------------------------PPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNT  286 (299)
T ss_dssp             ----------------------------------CCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred             ----------------------------------CCCccchHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence                                              1223478999999999999999999999998765


No 45 
>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=2.9e-53  Score=359.88  Aligned_cols=255  Identities=23%  Similarity=0.383  Sum_probs=201.9

Q ss_pred             chhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcC
Q 035861            9 SVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDD   88 (332)
Q Consensus         9 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~   88 (332)
                      ..++|++.+.||+|+||+||+|+++.+ ..||||++.......         ..+.+|+.++++++||||+++++++ .+
T Consensus        15 ~~~~~~i~~~iG~G~fg~Vy~~~~~~~-~~vAiK~l~~~~~~~---------~~~~~E~~~l~~l~h~nIv~~~g~~-~~   83 (285)
T d1fmka3          15 PRESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSP---------EAFLQEAQVMKKLRHEKLVQLYAVV-SE   83 (285)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEETTT-EEEEEEECCTTSSCH---------HHHHHHHHHHHHCCCTTBCCEEEEE-CS
T ss_pred             CHHHEEEeeEEeeCCCeEEEEEEECCC-CEEEEEEECcccCCH---------HHHHHHHHHHHhcccCCEeEEEEEE-ec
Confidence            357999999999999999999999754 569999997543322         2577999999999999999999988 44


Q ss_pred             CCeEEEEccccccc-HHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccc
Q 035861           89 HDSVYMVMEYMEHD-LKWLMES-MKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQ  166 (332)
Q Consensus        89 ~~~~~lv~e~~~~~-l~~~~~~-~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~  166 (332)
                       ...++||||++++ +...+.. ....+++..++.++.||+.||+|||++||+||||||+||||+.++.+||+|||++..
T Consensus        84 -~~~~lv~Ey~~~g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~ivH~DlKp~NIll~~~~~~kl~DfGla~~  162 (285)
T d1fmka3          84 -EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARL  162 (285)
T ss_dssp             -SSCEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCCTTC-
T ss_pred             -CCeEEEEEecCCCchhhhhhhcccccchHHHHHHHHHHHHHHHHHHhhhheecccccceEEEECCCCcEEEcccchhhh
Confidence             4468999999975 4444433 245799999999999999999999999999999999999999999999999999976


Q ss_pred             cCCC-CCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCC-CCCCChHHHHHHHHHHcCCCCCCcccC
Q 035861          167 YGSP-LKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPL-FSGTTEVDQIDKIFKTLGTPTETIWPG  244 (332)
Q Consensus       167 ~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~p-f~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (332)
                      .... ........|++.|+|||++.. ..++.++||||||+++|||++|..| +......+....+......        
T Consensus       163 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~ksDI~S~Giil~el~t~~~p~~~~~~~~~~~~~i~~~~~~--------  233 (285)
T d1fmka3         163 IEDNEYTARQGAKFPIKWTAPEAALY-GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM--------  233 (285)
T ss_dssp             -------------CCGGGSCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCC--------
T ss_pred             ccCCCceeeccccccccccChHHHhC-CCCCcHHhhhcchHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCC--------
Confidence            5332 223344678999999999987 6789999999999999999996555 4555555555555433211        


Q ss_pred             CCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhc--CCCCCCC
Q 035861          245 LSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALN--HYWFHEV  312 (332)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~--hp~f~~~  312 (332)
                                                  +.++.+++++++||.+||+.||++||++++|++  ++||...
T Consensus       234 ----------------------------~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~~~~~~  275 (285)
T d1fmka3         234 ----------------------------PCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTST  275 (285)
T ss_dssp             ----------------------------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCS
T ss_pred             ----------------------------CCCcccCHHHHHHHHHHcccCHhHCcCHHHHHHHHhhhhcCC
Confidence                                        122347899999999999999999999999998  8999764


No 46 
>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=2.1e-53  Score=368.52  Aligned_cols=252  Identities=22%  Similarity=0.363  Sum_probs=202.4

Q ss_pred             hcccccccccccCcEEEEEEEECCCCc-----EEEEEEeecccCCcccccccCCCcchhHHHHHHhhC-CCCCeeeeeee
Q 035861           11 FEFEKLNKISEGTYGIVYRARDKKSGE-----IVALKKVKMNVGRKEDCLEYGFPISSLREINILLSF-DHPSIVNVKEV   84 (332)
Q Consensus        11 ~~y~~~~~lg~g~~g~v~~~~~~~~~~-----~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~   84 (332)
                      ++|++++.||+|+||+||+|++..+++     .||+|++........       ...+.+|+.+++++ +||||++++++
T Consensus        37 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~-------~~~~~~E~~~l~~l~~HpnIv~l~~~  109 (325)
T d1rjba_          37 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSE-------REALMSELKMMTQLGSHENIVNLLGA  109 (325)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC-------------CHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred             HHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccCHHH-------HHHHHHHHHHHHHhcCCCcEeEEEEE
Confidence            589999999999999999999875543     689998865432211       22567899999888 89999999999


Q ss_pred             EEcCCCeEEEEcccccc-cHHHHHHhcC----------------------CCCCHHHHHHHHHHHHHHHHHHHHCCcccc
Q 035861           85 VMDDHDSVYMVMEYMEH-DLKWLMESMK----------------------QPFSTSEVKCLMLQLLEGVKYLHDNWVLHR  141 (332)
Q Consensus        85 ~~~~~~~~~lv~e~~~~-~l~~~~~~~~----------------------~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~  141 (332)
                      +. +....++|||||+| ++.+.+....                      ..+++..++.++.||+.||+|||++||+||
T Consensus       110 ~~-~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~IiHR  188 (325)
T d1rjba_         110 CT-LSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHR  188 (325)
T ss_dssp             EC-SSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEET
T ss_pred             Ee-eCCeEEEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeec
Confidence            94 44778999999986 5655554432                      348999999999999999999999999999


Q ss_pred             cCCCCCEEEcCCCcEEEeecccccccCCCCC--CCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHh-CCCCC
Q 035861          142 DLKTSNLLLNNQGVLKICDFGMSRQYGSPLK--PYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA-KKPLF  218 (332)
Q Consensus       142 di~p~Nili~~~~~~~l~df~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~llt-g~~pf  218 (332)
                      ||||+||+++.++.+||+|||+++.......  ......||+.|+|||++.+ ..++.++||||||+++|||+| |..||
T Consensus       189 DlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~~DiwS~Gvil~emlt~g~~Pf  267 (325)
T d1rjba_         189 DLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFE-GIYTIKSDVWSYGILLWEIFSLGVNPY  267 (325)
T ss_dssp             TCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHTTTSCCSS
T ss_pred             cCchhccccccCCeEEEeeccccccccCCCceeeeccccCCCccCChHHHcC-CCCCcceeccchhHHHHHHHhCCCCCC
Confidence            9999999999999999999999976543222  2235567999999999987 678999999999999999998 89999


Q ss_pred             CCCChHHHHHHHHHHcCCCCCCcccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCC
Q 035861          219 SGTTEVDQIDKIFKTLGTPTETIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRI  298 (332)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp  298 (332)
                      .+.+......++.....                                   ..+.+..+++++++||.+||+.||++||
T Consensus       268 ~~~~~~~~~~~~~~~~~-----------------------------------~~~~p~~~~~~l~~li~~cl~~dP~~RP  312 (325)
T d1rjba_         268 PGIPVDANFYKLIQNGF-----------------------------------KMDQPFYATEEIYIIMQSCWAFDSRKRP  312 (325)
T ss_dssp             TTCCCSHHHHHHHHTTC-----------------------------------CCCCCTTCCHHHHHHHHHHTCSSGGGSC
T ss_pred             CCCCHHHHHHHHHhcCC-----------------------------------CCCCCCcCCHHHHHHHHHHcCCChhHCc
Confidence            88766655555544311                                   1122334789999999999999999999


Q ss_pred             CHHHHhcC
Q 035861          299 TVDDALNH  306 (332)
Q Consensus       299 s~~ell~h  306 (332)
                      |++||++|
T Consensus       313 t~~ei~~~  320 (325)
T d1rjba_         313 SFPNLTSF  320 (325)
T ss_dssp             CHHHHHHH
T ss_pred             CHHHHHHH
Confidence            99999976


No 47 
>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=2.6e-52  Score=360.64  Aligned_cols=250  Identities=22%  Similarity=0.355  Sum_probs=199.7

Q ss_pred             hcccccccccccCcEEEEEEEECCCCc----EEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEE
Q 035861           11 FEFEKLNKISEGTYGIVYRARDKKSGE----IVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVM   86 (332)
Q Consensus        11 ~~y~~~~~lg~g~~g~v~~~~~~~~~~----~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~   86 (332)
                      .+|++++.||+|+||+||+|.+..+|+    +||+|.+.......       ....+.+|+.++++++||||+++++++.
T Consensus         9 ~dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~-------~~~~~~~E~~~l~~l~HpnIv~l~g~~~   81 (317)
T d1xkka_           9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK-------ANKEILDEAYVMASVDNPHVCRLLGICL   81 (317)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC----C-------THHHHHHHHHHHHHCCCTTBCCEEEEEE
T ss_pred             HHCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccccCHH-------HHHHHHHHHHHHHhCCCCCEeeEEEEEe
Confidence            589999999999999999999987776    57777775332111       1225789999999999999999999996


Q ss_pred             cCCCeEEEEcccc-cccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeeccccc
Q 035861           87 DDHDSVYMVMEYM-EHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSR  165 (332)
Q Consensus        87 ~~~~~~~lv~e~~-~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~  165 (332)
                      ++ .. +++++++ .|++.+.+......+++..++.++.||+.||+|||++||+||||||+||+++.++.+||+|||++.
T Consensus        82 ~~-~~-~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~yLH~~~iiHrDlKp~NIll~~~~~~kl~DFGla~  159 (317)
T d1xkka_          82 TS-TV-QLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAK  159 (317)
T ss_dssp             SS-SE-EEEEECCTTCBHHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCCSHHH
T ss_pred             cC-Ce-eEEEEeccCCcccccccccccCCCHHHHHHHHHHHHHHHHHHHHcCcccCcchhhcceeCCCCCeEeeccccce
Confidence            54 44 4555555 567888888878889999999999999999999999999999999999999999999999999998


Q ss_pred             ccCCCCCC--CccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCCCCCCcc
Q 035861          166 QYGSPLKP--YTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA-KKPLFSGTTEVDQIDKIFKTLGTPTETIW  242 (332)
Q Consensus       166 ~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~  242 (332)
                      ........  .....||+.|+|||++.+ ..++.++||||||+++|||+| |..||...+..+....+.+....      
T Consensus       160 ~~~~~~~~~~~~~~~gt~~y~APE~l~~-~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~~~~~~~~i~~~~~~------  232 (317)
T d1xkka_         160 LLGAEEKEYHAEGGKVPIKWMALESILH-RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERL------  232 (317)
T ss_dssp             HTTTTCC--------CCTTTSCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCGGGHHHHHHHTCCC------
T ss_pred             ecccccccccccccccCccccChHHHhc-CCCChhhhhhhHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCC------
Confidence            76433222  233467999999999987 678999999999999999998 78999887766665555443211      


Q ss_pred             cCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcC
Q 035861          243 PGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNH  306 (332)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h  306 (332)
                                                    ..++.+++++.+|+.+||+.||.+|||+.||++|
T Consensus       233 ------------------------------~~p~~~~~~~~~li~~cl~~dP~~RPs~~eil~~  266 (317)
T d1xkka_         233 ------------------------------PQPPICTIDVYMIMVKCWMIDADSRPKFRELIIE  266 (317)
T ss_dssp             ------------------------------CCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ------------------------------CCCcccCHHHHHHHHHhCCCChhhCcCHHHHHHH
Confidence                                          1223478999999999999999999999999988


No 48 
>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=7e-52  Score=352.24  Aligned_cols=251  Identities=24%  Similarity=0.379  Sum_probs=195.0

Q ss_pred             hhcccccccccccCcEEEEEEEECCCC----cEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeE
Q 035861           10 VFEFEKLNKISEGTYGIVYRARDKKSG----EIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVV   85 (332)
Q Consensus        10 ~~~y~~~~~lg~g~~g~v~~~~~~~~~----~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~   85 (332)
                      .+.|++.+.||+|+||+||+|.+..++    ..||||++........       ...+.+|+.++++++||||+++++++
T Consensus         6 ~~~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~-------~~~~~~E~~il~~l~H~nIv~~~g~~   78 (283)
T d1mqba_           6 PSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQ-------RVDFLGEAGIMGQFSHHNIIRLEGVI   78 (283)
T ss_dssp             TTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHH-------HHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred             HHHeEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccChHH-------HHHHHHHHHHHHhcCCCCEeeeeEEE
Confidence            457999999999999999999987554    4699999865432211       12467999999999999999999999


Q ss_pred             EcCCCeEEEEccccccc-HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccc
Q 035861           86 MDDHDSVYMVMEYMEHD-LKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMS  164 (332)
Q Consensus        86 ~~~~~~~~lv~e~~~~~-l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~  164 (332)
                      .+. ...++|||++.++ +.+.+......+++..+..++.||+.||+|||++||+||||||+||||+.++.+||+|||++
T Consensus        79 ~~~-~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~gl~~lH~~~iiHrDlKp~NILl~~~~~~Kl~DFGla  157 (283)
T d1mqba_          79 SKY-KPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLS  157 (283)
T ss_dssp             CSS-SSEEEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC-
T ss_pred             ecC-CceEEEEEecccCcchhhhhcccccccHHHHHHHHHHHHHhhhhccccccccCccccceEEECCCCeEEEcccchh
Confidence            544 7789999999875 45555565678999999999999999999999999999999999999999999999999999


Q ss_pred             cccCCCCC---CCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCC-CCCCChHHHHHHHHHHcCCCCCC
Q 035861          165 RQYGSPLK---PYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPL-FSGTTEVDQIDKIFKTLGTPTET  240 (332)
Q Consensus       165 ~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~p-f~~~~~~~~~~~~~~~~~~~~~~  240 (332)
                      +.......   ......||+.|+|||++.+ ..++.++||||||+++|||+++..| +...+..+....+.....     
T Consensus       158 ~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~-~~~~~~sDI~S~Gvil~el~t~~~~~~~~~~~~~~~~~i~~~~~-----  231 (283)
T d1mqba_         158 RVLEDDPEATYTTSGGKIPIRWTAPEAISY-RKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFR-----  231 (283)
T ss_dssp             ----------------CCCGGGSCHHHHHS-CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCC-----
T ss_pred             hcccCCCccceEeccCCCCccccCHHHHcc-CCCCCcccccccHHHHHHHHhCCCCccccCCHHHHHHHHhccCC-----
Confidence            87543222   2234467899999999987 6799999999999999999996555 555555555444433211     


Q ss_pred             cccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhc
Q 035861          241 IWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALN  305 (332)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~  305 (332)
                                                     ...+..++.++.+||.+||+.||++|||+.||++
T Consensus       232 -------------------------------~~~~~~~~~~l~~li~~cl~~~p~~RPt~~eil~  265 (283)
T d1mqba_         232 -------------------------------LPTPMDCPSAIYQLMMQCWQQERARRPKFADIVS  265 (283)
T ss_dssp             -------------------------------CCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             -------------------------------CCCchhhHHHHHHHHHHHCcCCHhHCcCHHHHHH
Confidence                                           1122337889999999999999999999999987


No 49 
>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=8.7e-53  Score=352.87  Aligned_cols=246  Identities=23%  Similarity=0.397  Sum_probs=198.0

Q ss_pred             chhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcC
Q 035861            9 SVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDD   88 (332)
Q Consensus         9 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~   88 (332)
                      .+++|++++.||+|+||.||+|.++  |..||||++.....          ...+.+|++.+++++||||+++++++.++
T Consensus         5 ~~~~~~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~i~~~~~----------~~~~~~E~~~l~~l~HpnIv~~~g~~~~~   72 (262)
T d1byga_           5 NMKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDAT----------AQAFLAEASVMTQLRHSNLVQLLGVIVEE   72 (262)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEET--TEEEEEEECCCCC------------HHHHHTHHHHTTCCCTTBCCEEEEECCC
T ss_pred             CHHHeEEeEEEecCCCeEEEEEEEC--CeEEEEEEECcHHH----------HHHHHHHHHHHHhCCCCCEeeEEEEEEec
Confidence            5679999999999999999999986  78999999964321          12567999999999999999999998776


Q ss_pred             CCeEEEEcccccc-cHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccc
Q 035861           89 HDSVYMVMEYMEH-DLKWLMESM-KQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQ  166 (332)
Q Consensus        89 ~~~~~lv~e~~~~-~l~~~~~~~-~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~  166 (332)
                      ...+|+||||+++ ++.+.+... ...+++..++.++.||+.||+|||+.+++||||||+||+++.++.++++|||.+..
T Consensus        73 ~~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH~~~ivH~dlkp~Nil~~~~~~~kl~dfg~s~~  152 (262)
T d1byga_          73 KGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKE  152 (262)
T ss_dssp             --CCEEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCCCC---
T ss_pred             CCcEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHhhccccccCceeccccchHhheecCCCCEeeccccccee
Confidence            6778999999986 555555443 24589999999999999999999999999999999999999999999999999986


Q ss_pred             cCCCCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCCCCCCcccCC
Q 035861          167 YGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA-KKPLFSGTTEVDQIDKIFKTLGTPTETIWPGL  245 (332)
Q Consensus       167 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (332)
                      ....   .....++..|+|||++.+ ..++.++||||||+++|||+| |..||...+..+....+.+..           
T Consensus       153 ~~~~---~~~~~~~~~y~aPE~l~~-~~~t~~sDIwSfG~il~el~t~~~~p~~~~~~~~~~~~i~~~~-----------  217 (262)
T d1byga_         153 ASST---QDTGKLPVKWTAPEALRE-KKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGY-----------  217 (262)
T ss_dssp             ------------CCTTTSCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTTTC-----------
T ss_pred             cCCC---CccccccccCCChHHHhC-CCCChHHHHHhHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCC-----------
Confidence            5432   234567889999999987 678999999999999999998 788888777766666553321           


Q ss_pred             CCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcC
Q 035861          246 SELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNH  306 (332)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h  306 (332)
                                               ..+.++.+++++.+||.+||+.||.+|||+.+|+++
T Consensus       218 -------------------------~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~l~~~  253 (262)
T d1byga_         218 -------------------------KMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQ  253 (262)
T ss_dssp             -------------------------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             -------------------------CCCCCccCCHHHHHHHHHHcccCHhHCcCHHHHHHH
Confidence                                     111233478999999999999999999999999874


No 50 
>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.8e-52  Score=354.32  Aligned_cols=251  Identities=24%  Similarity=0.362  Sum_probs=196.5

Q ss_pred             hhcccccccccccCcEEEEEEEECCCC---cEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEE
Q 035861           10 VFEFEKLNKISEGTYGIVYRARDKKSG---EIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVM   86 (332)
Q Consensus        10 ~~~y~~~~~lg~g~~g~v~~~~~~~~~---~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~   86 (332)
                      .++|++++.||+|+||+||+|++..++   ..||||.+.......  .     ...+.+|+.++++++||||+++++++ 
T Consensus         6 ~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~--~-----~~~~~~E~~~l~~l~HpnIv~l~~~~-   77 (273)
T d1mp8a_           6 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDS--V-----REKFLQEALTMRQFDHPHIVKLIGVI-   77 (273)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHH--H-----HHHHHHHHHHHHTCCCTTBCCEEEEE-
T ss_pred             HHHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccCHH--H-----HHHHHHHHHHHHhCCCCCEeeEEEEE-
Confidence            468999999999999999999986543   467888775432211  1     12567999999999999999999988 


Q ss_pred             cCCCeEEEEcccccc-cHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeeccccc
Q 035861           87 DDHDSVYMVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSR  165 (332)
Q Consensus        87 ~~~~~~~lv~e~~~~-~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~  165 (332)
                      .+ ...++||||+++ ++.+.+......+++..++.++.||+.||+|||++|++||||||+||+++.++.+||+|||+++
T Consensus        78 ~~-~~~~iv~E~~~~g~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDlKp~NIll~~~~~~Kl~DfG~a~  156 (273)
T d1mp8a_          78 TE-NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSR  156 (273)
T ss_dssp             CS-SSCEEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECC-----
T ss_pred             ec-CeEEEEEEeccCCcHHhhhhccCCCCCHHHHHHHHHHHHHHhhhhcccCeeccccchhheeecCCCcEEEccchhhe
Confidence            43 567899999986 5555566667789999999999999999999999999999999999999999999999999998


Q ss_pred             ccCCCC-CCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCCCCCCccc
Q 035861          166 QYGSPL-KPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA-KKPLFSGTTEVDQIDKIFKTLGTPTETIWP  243 (332)
Q Consensus       166 ~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  243 (332)
                      ...... .......||+.|+|||++.+ ..++.++||||||+++|||++ |..||...+..+....+......       
T Consensus       157 ~~~~~~~~~~~~~~gt~~y~apE~l~~-~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~~~~~~~i~~~~~~-------  228 (273)
T d1mp8a_         157 YMEDSTYYKASKGKLPIKWMAPESINF-RRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERL-------  228 (273)
T ss_dssp             --------------CCGGGCCHHHHHH-CCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCC-------
T ss_pred             eccCCcceeccceecCcccchhhHhcc-CCCCCccccccchHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCC-------
Confidence            754322 22344567899999999987 678999999999999999998 89999988887777666543211       


Q ss_pred             CCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcC
Q 035861          244 GLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNH  306 (332)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h  306 (332)
                                                   ..++.+|+++.+||.+||+.||++|||++||++|
T Consensus       229 -----------------------------~~~~~~~~~~~~li~~cl~~dp~~Rps~~ei~~~  262 (273)
T d1mp8a_         229 -----------------------------PMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQ  262 (273)
T ss_dssp             -----------------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             -----------------------------CCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence                                         1233489999999999999999999999999876


No 51 
>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=2.7e-52  Score=352.45  Aligned_cols=254  Identities=24%  Similarity=0.349  Sum_probs=198.7

Q ss_pred             chhcccccccccccCcEEEEEEEECCC---CcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeE
Q 035861            9 SVFEFEKLNKISEGTYGIVYRARDKKS---GEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVV   85 (332)
Q Consensus         9 ~~~~y~~~~~lg~g~~g~v~~~~~~~~---~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~   85 (332)
                      ...+|++++.||+|+||+||+|+...+   ...||||++...........     ..+.+|+.++++++||||+++++++
T Consensus         6 ~~~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~-----~~~~~Ei~~l~~l~H~nIv~~~g~~   80 (273)
T d1u46a_           6 GEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAM-----DDFIREVNAMHSLDHRNLIRLYGVV   80 (273)
T ss_dssp             CGGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHH-----HHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             chHHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHH-----HHHHHHHHHHHhCCCCCEEEEEEEE
Confidence            356899999999999999999987533   23689999876543332222     2578999999999999999999999


Q ss_pred             EcCCCeEEEEcccccc-cHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccc
Q 035861           86 MDDHDSVYMVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMS  164 (332)
Q Consensus        86 ~~~~~~~~lv~e~~~~-~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~  164 (332)
                      . + ...++||||+++ ++.+.+....+.+++..+..++.||+.||.|||++||+||||||+||+++.++.+||+|||++
T Consensus        81 ~-~-~~~~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDikp~NIll~~~~~vkl~DfGl~  158 (273)
T d1u46a_          81 L-T-PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLM  158 (273)
T ss_dssp             C-S-SSCEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTC
T ss_pred             e-e-cchheeeeeecCcchhhhhhcccCCCCHHHHHHHHHHHHHHHHHhhhCCEeeeeecHHHhccccccceeeccchhh
Confidence            4 4 356899999984 667677776778999999999999999999999999999999999999999999999999999


Q ss_pred             cccCCCCC---CCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCCCCCC
Q 035861          165 RQYGSPLK---PYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA-KKPLFSGTTEVDQIDKIFKTLGTPTET  240 (332)
Q Consensus       165 ~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~  240 (332)
                      ........   ......++..|+|||++.+ ..++.++||||||+++|||+| |..||.+.+..+....+.+....    
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~-~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~~~~~~~~i~~~~~~----  233 (273)
T d1u46a_         159 RALPQNDDHYVMQEHRKVPFAWCAPESLKT-RTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGER----  233 (273)
T ss_dssp             EECCC-CCEEEC-----CCGGGCCHHHHHH-CEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTSCCC----
T ss_pred             hhcccCCCcceecCccccCcccCCHHHHhC-CCCCcchhhhhhHHHHHHHHhCCCCCCCCcCHHHHHHHHHhCCCC----
Confidence            87644322   1223457889999999987 678999999999999999998 89999998888877766543211    


Q ss_pred             cccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhc
Q 035861          241 IWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALN  305 (332)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~  305 (332)
                                                     .+.++.+++++.+||.+||+.||++|||+.||++
T Consensus       234 -------------------------------~~~~~~~~~~l~~li~~cl~~dp~~RPt~~ei~~  267 (273)
T d1u46a_         234 -------------------------------LPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRD  267 (273)
T ss_dssp             -------------------------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             -------------------------------CCCcccccHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence                                           1123347899999999999999999999999864


No 52 
>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=3.2e-51  Score=351.42  Aligned_cols=254  Identities=21%  Similarity=0.376  Sum_probs=193.6

Q ss_pred             hhcccccccccccCcEEEEEEEECC-----CCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhC-CCCCeeeeee
Q 035861           10 VFEFEKLNKISEGTYGIVYRARDKK-----SGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSF-DHPSIVNVKE   83 (332)
Q Consensus        10 ~~~y~~~~~lg~g~~g~v~~~~~~~-----~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~   83 (332)
                      .++|++++.||+|+||+||+|.+..     +++.||||++.........       ..+..|...+.++ .|+||+.+++
T Consensus        12 ~~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~-------~~~~~e~~~l~~~~~h~~iv~~~~   84 (299)
T d1ywna1          12 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEH-------RALMSELKILIHIGHHLNVVNLLG   84 (299)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHH-------HHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred             HHHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHHH-------HHHHHHHHHHHhhcCCCeEEEeee
Confidence            3689999999999999999999754     4468999998654322211       1355777777666 6889999999


Q ss_pred             eEEcCCCeEEEEcccccc-cHHHHHHhc---------------CCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCC
Q 035861           84 VVMDDHDSVYMVMEYMEH-DLKWLMESM---------------KQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSN  147 (332)
Q Consensus        84 ~~~~~~~~~~lv~e~~~~-~l~~~~~~~---------------~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~N  147 (332)
                      .+.+++...++|||||+| ++.+.+...               ...+++..+..++.||+.||+|||++||+||||||+|
T Consensus        85 ~~~~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~ivHrDlKp~N  164 (299)
T d1ywna1          85 ACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARN  164 (299)
T ss_dssp             EECSTTSCCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGG
T ss_pred             eeccCCCeEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhCCCcCCcCCccc
Confidence            987777789999999995 555555432               2358999999999999999999999999999999999


Q ss_pred             EEEcCCCcEEEeecccccccCCCC--CCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhC-CCCCCCCChH
Q 035861          148 LLLNNQGVLKICDFGMSRQYGSPL--KPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAK-KPLFSGTTEV  224 (332)
Q Consensus       148 ili~~~~~~~l~df~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg-~~pf~~~~~~  224 (332)
                      ||++.++.+||+|||+++......  .......||+.|+|||++.+ ..++.++||||||+++|||+|| ..||......
T Consensus       165 ILl~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~-~~~~~~sDiwS~Gvil~ellt~~~~p~~~~~~~  243 (299)
T d1ywna1         165 ILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFD-RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID  243 (299)
T ss_dssp             EEECGGGCEEECC------CCSCTTSCCTTSCCCGGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCS
T ss_pred             eeECCCCcEEEccCcchhhccccccccccCceeeCccccchhHhhc-CCCCcccceeehHHHHHHHHhCCCCCCCCCCHH
Confidence            999999999999999997653322  22345678999999999987 6789999999999999999986 5678776555


Q ss_pred             HHHHHHHHHcCCCCCCcccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHh
Q 035861          225 DQIDKIFKTLGTPTETIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDAL  304 (332)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell  304 (332)
                      +...........+                                   ..+..+++++++||.+||+.||++|||++||+
T Consensus       244 ~~~~~~~~~~~~~-----------------------------------~~~~~~~~~l~~li~~cl~~dP~~Rpt~~eil  288 (299)
T d1ywna1         244 EEFCRRLKEGTRM-----------------------------------RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELV  288 (299)
T ss_dssp             HHHHHHHHHTCCC-----------------------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             HHHHHHHhcCCCC-----------------------------------CCCccCCHHHHHHHHHHcCCChhHCcCHHHHH
Confidence            5444444331111                                   11233789999999999999999999999999


Q ss_pred             cC
Q 035861          305 NH  306 (332)
Q Consensus       305 ~h  306 (332)
                      +|
T Consensus       289 ~~  290 (299)
T d1ywna1         289 EH  290 (299)
T ss_dssp             HH
T ss_pred             HH
Confidence            87


No 53 
>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=3.1e-51  Score=352.58  Aligned_cols=252  Identities=24%  Similarity=0.373  Sum_probs=201.5

Q ss_pred             chhcccccccccccCcEEEEEEEECCCCcE--EEEEEeecccCCcccccccCCCcchhHHHHHHhhC-CCCCeeeeeeeE
Q 035861            9 SVFEFEKLNKISEGTYGIVYRARDKKSGEI--VALKKVKMNVGRKEDCLEYGFPISSLREINILLSF-DHPSIVNVKEVV   85 (332)
Q Consensus         9 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~--v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~   85 (332)
                      .+++|++.+.||+|+||+||+|+++.++..  ||||.+........       ...+.+|+.+++++ +||||+++++++
T Consensus         8 ~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~-------~~~~~~E~~~l~~l~~HpnIv~~~~~~   80 (309)
T d1fvra_           8 DWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDD-------HRDFAGELEVLCKLGHHPNIINLLGAC   80 (309)
T ss_dssp             CGGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC-------------CHHHHHHHHHTTCCCCTTBCCEEEEE
T ss_pred             CHHHcEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcccChHH-------HHHHHHHHHHHHhccCCCCEeeEEEEE
Confidence            567999999999999999999999888775  56666643222111       22578999999998 799999999999


Q ss_pred             EcCCCeEEEEcccccc-cHHHHHHhc---------------CCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEE
Q 035861           86 MDDHDSVYMVMEYMEH-DLKWLMESM---------------KQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLL  149 (332)
Q Consensus        86 ~~~~~~~~lv~e~~~~-~l~~~~~~~---------------~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nil  149 (332)
                      .++ ...++||||++| ++.+.+...               ...+++..+..++.||+.||.|||+.|++||||||+|||
T Consensus        81 ~~~-~~~~iV~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~~iiHrDlkp~NIL  159 (309)
T d1fvra_          81 EHR-GYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNIL  159 (309)
T ss_dssp             EET-TEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEE
T ss_pred             ecC-CeeEEEEEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcCCccccccccceEE
Confidence            654 889999999996 555554322               357999999999999999999999999999999999999


Q ss_pred             EcCCCcEEEeecccccccCCCCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCC-CCCCCCChHHHHH
Q 035861          150 LNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKK-PLFSGTTEVDQID  228 (332)
Q Consensus       150 i~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~-~pf~~~~~~~~~~  228 (332)
                      ++.++.+||+|||++...... .......||..|+|||.+.. ..++.++||||||+++|||++|. .||...+..+...
T Consensus       160 ~~~~~~~kl~DfG~a~~~~~~-~~~~~~~gt~~y~aPE~l~~-~~~~~~sDvwSfGvil~ell~~~~~p~~~~~~~~~~~  237 (309)
T d1fvra_         160 VGENYVAKIADFGLSRGQEVY-VKKTMGRLPVRWMAIESLNY-SVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYE  237 (309)
T ss_dssp             ECGGGCEEECCTTCEESSCEE-CCC----CCTTTCCHHHHHH-CEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHH
T ss_pred             EcCCCceEEcccccccccccc-ccccceecCCcccchHHhcc-CCCCccceeehhHHHHHHHHhcCCCCCCCCCHHHHHH
Confidence            999999999999999765332 22234568899999999987 67899999999999999999975 5677777766655


Q ss_pred             HHHHHcCCCCCCcccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcC
Q 035861          229 KIFKTLGTPTETIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNH  306 (332)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h  306 (332)
                      .+.+...                                    ...+..+++++.+||.+||+.||++|||++||+++
T Consensus       238 ~i~~~~~------------------------------------~~~~~~~~~~~~~li~~cl~~dP~~RPs~~eil~~  279 (309)
T d1fvra_         238 KLPQGYR------------------------------------LEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS  279 (309)
T ss_dssp             HGGGTCC------------------------------------CCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHhcCC------------------------------------CCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            5533211                                    11223478999999999999999999999999987


No 54 
>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=100.00  E-value=5.8e-50  Score=343.67  Aligned_cols=267  Identities=20%  Similarity=0.237  Sum_probs=209.9

Q ss_pred             CcccccccchhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeee
Q 035861            1 MNMLQGCRSVFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVN   80 (332)
Q Consensus         1 ~~~~~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~   80 (332)
                      |++-.|.    +|++++.||+|+||+||+|++..+++.||||++......          ..+..|+++++.+.|++++.
T Consensus         1 ~~~~vg~----rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~----------~~~~~E~~i~~~l~~~~~i~   66 (299)
T d1ckia_           1 MELRVGN----RYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH----------PQLHIESKIYKMMQGGVGIP   66 (299)
T ss_dssp             CCCEETT----TEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCTTS----------CCHHHHHHHHHHSTTSTTCC
T ss_pred             CCCeECC----EEEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhccC----------HHHHHHHHHHHHccCCCccc
Confidence            5555554    799999999999999999999999999999998754322          14678999999999888777


Q ss_pred             eeeeEEcCCCeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcC---CCcEE
Q 035861           81 VKEVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNN---QGVLK  157 (332)
Q Consensus        81 ~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~---~~~~~  157 (332)
                      .+..+..+....++|||++++++...+......+++..+..++.|++.||+|||++||+||||||+||+++.   +..++
T Consensus        67 ~~~~~~~~~~~~~ivme~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDiKp~NIl~~~~~~~~~vk  146 (299)
T d1ckia_          67 TIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVY  146 (299)
T ss_dssp             CEEEEEEETTEEEEEEECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEE
T ss_pred             EEEEEEecCCEEEEEEEEcCCchhhhhhhccCCCcHHHHHHHHHHHHHHHHHHHHCCeeeccCCHhhccccccCCCceee
Confidence            766666777889999999999998888887889999999999999999999999999999999999999864   45799


Q ss_pred             EeecccccccCCCC-------CCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Q 035861          158 ICDFGMSRQYGSPL-------KPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKI  230 (332)
Q Consensus       158 l~df~~~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~~~~  230 (332)
                      |+|||++.......       .......||+.|+|||.+.+ ..++.++||||||+++|+|++|..||...........+
T Consensus       147 l~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~~~  225 (299)
T d1ckia_         147 IIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLG-IEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKY  225 (299)
T ss_dssp             ECCCSSCEECBCTTTCCBCCCCBCCSCCCCSSSCCHHHHTT-BCCCHHHHHHHHHHHHHHHHHSSCTTCCCC-------H
T ss_pred             eeccCcceeccccccccceeccccCCcCCCccccCHHHHhC-CCCCChhhEEecCHHHHHHHhCCCcccccchHHHHHHH
Confidence            99999998764322       12345579999999999987 67899999999999999999999999876554433332


Q ss_pred             HHHcCCCCCCcccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHH---HHhcCC
Q 035861          231 FKTLGTPTETIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVD---DALNHY  307 (332)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~---ell~hp  307 (332)
                      ......                             ..........+.+|+++.+||.+||+.+|++||++.   ++|+|+
T Consensus       226 ~~~~~~-----------------------------~~~~~~~~~~~~~p~~~~~li~~cl~~~p~~RP~~~~i~~~l~~~  276 (299)
T d1ckia_         226 ERISEK-----------------------------KMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNL  276 (299)
T ss_dssp             HHHHHH-----------------------------HHHSCHHHHTTTSCHHHHHHHHHHHHSCTTCCCCHHHHHHHHHHH
T ss_pred             HHhhcc-----------------------------cCCCChhHhccCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHH
Confidence            211000                             000000001223789999999999999999999976   557887


Q ss_pred             CCCC
Q 035861          308 WFHE  311 (332)
Q Consensus       308 ~f~~  311 (332)
                      |.++
T Consensus       277 ~~~~  280 (299)
T d1ckia_         277 FHRQ  280 (299)
T ss_dssp             HHHH
T ss_pred             HHHc
Confidence            7654


No 55 
>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=100.00  E-value=1.9e-50  Score=346.54  Aligned_cols=251  Identities=26%  Similarity=0.396  Sum_probs=202.5

Q ss_pred             hhcccccccccccCcEEEEEEEECC-----CCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeee
Q 035861           10 VFEFEKLNKISEGTYGIVYRARDKK-----SGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEV   84 (332)
Q Consensus        10 ~~~y~~~~~lg~g~~g~v~~~~~~~-----~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~   84 (332)
                      .++|++++.||+|+||+||+|++..     +++.||||++........       ...+.+|+.++++++||||+.+++.
T Consensus        12 ~~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~-------~~~~~~E~~il~~l~h~niv~~~~~   84 (301)
T d1lufa_          12 RNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADM-------QADFQREAALMAEFDNPNIVKLLGV   84 (301)
T ss_dssp             GGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHH-------HHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred             HHHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHH-------HHHHHHHHHHHHhcCCCCcccceee
Confidence            3589999999999999999999753     557899999865432111       1256799999999999999999999


Q ss_pred             EEcCCCeEEEEcccccc-cHHHHHHhc-----------------------CCCCCHHHHHHHHHHHHHHHHHHHHCCccc
Q 035861           85 VMDDHDSVYMVMEYMEH-DLKWLMESM-----------------------KQPFSTSEVKCLMLQLLEGVKYLHDNWVLH  140 (332)
Q Consensus        85 ~~~~~~~~~lv~e~~~~-~l~~~~~~~-----------------------~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H  140 (332)
                      +.. ....+++||++++ ++.+.+...                       ...+++..+..++.||+.||+|||+.|++|
T Consensus        85 ~~~-~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~~ivH  163 (301)
T d1lufa_          85 CAV-GKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVH  163 (301)
T ss_dssp             ECS-SSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred             ecc-CCceEEEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcccCCeEe
Confidence            954 4778999999985 555555432                       124899999999999999999999999999


Q ss_pred             ccCCCCCEEEcCCCcEEEeecccccccCCC--CCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCC-CC
Q 035861          141 RDLKTSNLLLNNQGVLKICDFGMSRQYGSP--LKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKK-PL  217 (332)
Q Consensus       141 ~di~p~Nili~~~~~~~l~df~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~-~p  217 (332)
                      |||||+|||++.++.+||+|||++......  ........+++.|+|||.+.+ ..++.++||||||+++|||++|. .|
T Consensus       164 rDlKp~NILld~~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~t~ksDVwS~Gvvl~ell~~~~~p  242 (301)
T d1lufa_         164 RDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFY-NRYTTESDVWAYGVVLWEIFSYGLQP  242 (301)
T ss_dssp             SCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTTCCT
T ss_pred             eEEcccceEECCCCcEEEccchhheeccCCccccccCCCCcCcCcCCHHHHcc-CCCChhhhhccchhhHHHHHccCCCC
Confidence            999999999999999999999999765322  222335578899999999987 67999999999999999999985 67


Q ss_pred             CCCCChHHHHHHHHHHcCCCCCCcccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCC
Q 035861          218 FSGTTEVDQIDKIFKTLGTPTETIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKR  297 (332)
Q Consensus       218 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R  297 (332)
                      |...+..+....+......                                    ..+..+++++.+||.+||+.||++|
T Consensus       243 ~~~~~~~e~~~~v~~~~~~------------------------------------~~p~~~~~~~~~li~~cl~~~P~~R  286 (301)
T d1lufa_         243 YYGMAHEEVIYYVRDGNIL------------------------------------ACPENCPLELYNLMRLCWSKLPADR  286 (301)
T ss_dssp             TTTSCHHHHHHHHHTTCCC------------------------------------CCCTTCCHHHHHHHHHHTCSSGGGS
T ss_pred             CCCCCHHHHHHHHHcCCCC------------------------------------CCCccchHHHHHHHHHHcCCChhHC
Confidence            8888877777666543211                                    1123478999999999999999999


Q ss_pred             CCHHHHhc
Q 035861          298 ITVDDALN  305 (332)
Q Consensus       298 ps~~ell~  305 (332)
                      ||+.||++
T Consensus       287 Pt~~ev~~  294 (301)
T d1lufa_         287 PSFCSIHR  294 (301)
T ss_dssp             CCHHHHHH
T ss_pred             cCHHHHHH
Confidence            99999965


No 56 
>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=4.4e-50  Score=343.77  Aligned_cols=251  Identities=21%  Similarity=0.367  Sum_probs=198.1

Q ss_pred             hhcccccccccccCcEEEEEEEECCCC-------cEEEEEEeecccCCcccccccCCCcchhHHHHHHhhC-CCCCeeee
Q 035861           10 VFEFEKLNKISEGTYGIVYRARDKKSG-------EIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSF-DHPSIVNV   81 (332)
Q Consensus        10 ~~~y~~~~~lg~g~~g~v~~~~~~~~~-------~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~   81 (332)
                      .++|++++.||+|+||.||+|+...++       ..||||++........       ...+.+|...+.++ +||||+++
T Consensus        12 ~~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~-------~~~~~~e~~~l~~~~~HpnIv~~   84 (299)
T d1fgka_          12 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKD-------LSDLISEMEMMKMIGKHKNIINL   84 (299)
T ss_dssp             GGGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHH-------HHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             HHHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHH-------HHHHHHHHHHHHHhcCCCeEEec
Confidence            479999999999999999999976544       3799999975432221       12456788888777 89999999


Q ss_pred             eeeEEcCCCeEEEEcccccc-cHHHHHHhcC---------------CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCC
Q 035861           82 KEVVMDDHDSVYMVMEYMEH-DLKWLMESMK---------------QPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKT  145 (332)
Q Consensus        82 ~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~---------------~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p  145 (332)
                      ++++.++ ...++||||+++ ++.+.+....               ..+++..++.++.||+.||+|||++||+||||||
T Consensus        85 ~~~~~~~-~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~~ivHrDiKp  163 (299)
T d1fgka_          85 LGACTQD-GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAA  163 (299)
T ss_dssp             EEEECSS-SSCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSG
T ss_pred             ccccccC-CeEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhCCEEeeeecc
Confidence            9999554 778999999986 4555554332               3589999999999999999999999999999999


Q ss_pred             CCEEEcCCCcEEEeecccccccCCCC--CCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCC
Q 035861          146 SNLLLNNQGVLKICDFGMSRQYGSPL--KPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA-KKPLFSGTT  222 (332)
Q Consensus       146 ~Nili~~~~~~~l~df~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~llt-g~~pf~~~~  222 (332)
                      +|||++.++.+||+|||.+.......  .......+++.|+|||.+.+ +.++.++||||||+++|+|++ |..||...+
T Consensus       164 ~NiLl~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~-~~y~~k~DiwS~Gvvl~ell~~g~~p~~~~~  242 (299)
T d1fgka_         164 RNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFD-RIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP  242 (299)
T ss_dssp             GGEEECTTCCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred             cceeecCCCCeEeccchhhccccccccccccccCCCChhhhhhhHhcC-CCCCchhhhHHhHHHHHHhccCCCCCCCCCC
Confidence            99999999999999999988664322  22344578899999999987 679999999999999999998 788888877


Q ss_pred             hHHHHHHHHHHcCCCCCCcccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHH
Q 035861          223 EVDQIDKIFKTLGTPTETIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDD  302 (332)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e  302 (332)
                      ..+....+.....                                    ...++.+++++.+||.+||+.||++|||+.|
T Consensus       243 ~~~~~~~i~~~~~------------------------------------~~~p~~~~~~l~~li~~cl~~dP~~Rps~~e  286 (299)
T d1fgka_         243 VEELFKLLKEGHR------------------------------------MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQ  286 (299)
T ss_dssp             HHHHHHHHHTTCC------------------------------------CCCCSSCCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             HHHHHHHHHcCCC------------------------------------CCCCccchHHHHHHHHHHccCCHhHCcCHHH
Confidence            7666555433211                                    1122347899999999999999999999999


Q ss_pred             Hhc
Q 035861          303 ALN  305 (332)
Q Consensus       303 ll~  305 (332)
                      |++
T Consensus       287 il~  289 (299)
T d1fgka_         287 LVE  289 (299)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            986


No 57 
>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.1e-49  Score=342.52  Aligned_cols=250  Identities=20%  Similarity=0.303  Sum_probs=196.3

Q ss_pred             ccccccccccCcEEEEEEEECCCC---cEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeEEcCC
Q 035861           13 FEKLNKISEGTYGIVYRARDKKSG---EIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVVMDDH   89 (332)
Q Consensus        13 y~~~~~lg~g~~g~v~~~~~~~~~---~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~   89 (332)
                      +++.+.||+|+||+||+|++..++   ..||||++.......  .     ...+.+|++++++++||||+++++++.+.+
T Consensus        29 ~~~~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~--~-----~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~  101 (311)
T d1r0pa_          29 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG--E-----VSQFLTEGIIMKDFSHPNVLSLLGICLRSE  101 (311)
T ss_dssp             EEEEEEEEEETTEEEEEEEECC----CEEEEEEEECCCCCHH--H-----HHHHHHHHHHHHTCCCTTBCCCCEEEEETT
T ss_pred             eccceEEeecCCeEEEEEEEECCCCEEEEEEEEEECcccCHH--H-----HHHHHHHHHHHHhCCCCCEeEEeEEEEecC
Confidence            344678999999999999986543   368999986432211  1     125789999999999999999999987776


Q ss_pred             CeEEEEccccccc-HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecccccccC
Q 035861           90 DSVYMVMEYMEHD-LKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYG  168 (332)
Q Consensus        90 ~~~~lv~e~~~~~-l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~~~~~~~  168 (332)
                      ...++||||++++ +.+.+......+++..+..++.|++.||.|||+.||+||||||+|||++.++.+||+|||+++...
T Consensus       102 ~~~~lv~E~~~~g~l~~~~~~~~~~~~~~~~~~i~~qia~gL~~lH~~~iiHrDLK~~NILl~~~~~~kL~DFG~~~~~~  181 (311)
T d1r0pa_         102 GSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMY  181 (311)
T ss_dssp             TEEEEEEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECSSGGGCCTT
T ss_pred             CceEEEEEEeecCchhhhhccccccchHHHHHHHHHHHHHhhhhhcccCcccCCccHHhEeECCCCCEEEecccchhhcc
Confidence            7899999999965 445555556678899999999999999999999999999999999999999999999999998653


Q ss_pred             CCCC----CCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC-hHHHHHHHHHHcCCCCCCccc
Q 035861          169 SPLK----PYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTT-EVDQIDKIFKTLGTPTETIWP  243 (332)
Q Consensus       169 ~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~-~~~~~~~~~~~~~~~~~~~~~  243 (332)
                      ....    ......||..|+|||.+.+ ..++.++||||||+++|||+||..||.... ..+....+....         
T Consensus       182 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~ksDI~SfGivl~El~t~~~p~~~~~~~~~~~~~i~~g~---------  251 (311)
T d1r0pa_         182 DKEFDSVHNKTGAKLPVKWMALESLQT-QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR---------  251 (311)
T ss_dssp             TTTCCCTTCTTCSSCCGGGSCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTSCCSCC------CHHHHHTTC---------
T ss_pred             ccccccceecccccccccccChHHHhc-CCCCChhHhhhhHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCC---------
Confidence            3211    2233568899999999887 678999999999999999999888776543 222333332221         


Q ss_pred             CCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhcC
Q 035861          244 GLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNH  306 (332)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h  306 (332)
                                                 ....++.+++++.+||.+||+.||++||++.||++|
T Consensus       252 ---------------------------~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~  287 (311)
T d1r0pa_         252 ---------------------------RLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSR  287 (311)
T ss_dssp             ---------------------------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ---------------------------CCCCcccCcHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence                                       111223478899999999999999999999999998


No 58 
>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=5.1e-50  Score=344.65  Aligned_cols=260  Identities=23%  Similarity=0.361  Sum_probs=210.5

Q ss_pred             hhcccccccccccCcEEEEEEEECC-----CCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeee
Q 035861           10 VFEFEKLNKISEGTYGIVYRARDKK-----SGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEV   84 (332)
Q Consensus        10 ~~~y~~~~~lg~g~~g~v~~~~~~~-----~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~   84 (332)
                      .++|++.+.||+|+||+||+|.++.     ++..||||++........       ...+.+|+.++++++||||++++++
T Consensus        19 ~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~-------~~~~~~E~~il~~l~h~nIv~~~~~   91 (308)
T d1p4oa_          19 REKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRE-------RIEFLNEASVMKEFNCHHVVRLLGV   91 (308)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHH-------HHHHHHHHHHGGGCCCTTBCCEEEE
T ss_pred             HHHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChHH-------HHHHHHHHHHHHHcCCCCEeeeeeE
Confidence            4799999999999999999998853     356899999864332211       1246799999999999999999999


Q ss_pred             EEcCCCeEEEEcccccc-cHHHHHHhc---------CCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCC
Q 035861           85 VMDDHDSVYMVMEYMEH-DLKWLMESM---------KQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQG  154 (332)
Q Consensus        85 ~~~~~~~~~lv~e~~~~-~l~~~~~~~---------~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~  154 (332)
                      +.. ....++||||+++ ++.+.+...         ...+++..+..++.|++.||+|||+++|+||||||+|||++.++
T Consensus        92 ~~~-~~~~~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~~ivHrDlk~~NiLld~~~  170 (308)
T d1p4oa_          92 VSQ-GQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDF  170 (308)
T ss_dssp             ECS-SSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECTTC
T ss_pred             Eec-CCceeEEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhCCeeeceEcCCceeecCCc
Confidence            944 4778999999985 454544332         13478999999999999999999999999999999999999999


Q ss_pred             cEEEeecccccccCCCCC--CCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhC-CCCCCCCChHHHHHHHH
Q 035861          155 VLKICDFGMSRQYGSPLK--PYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAK-KPLFSGTTEVDQIDKIF  231 (332)
Q Consensus       155 ~~~l~df~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg-~~pf~~~~~~~~~~~~~  231 (332)
                      ++||+|||++........  ......+++.|+|||.+.+ ..++.++|+||||+++|||+|| ..||...+..+....+.
T Consensus       171 ~~Kl~DFGla~~~~~~~~~~~~~~~~~t~~y~aPe~l~~-~~~~~~~Dv~S~G~il~El~t~~~~p~~~~~~~~~~~~i~  249 (308)
T d1p4oa_         171 TVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKD-GVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVM  249 (308)
T ss_dssp             CEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHH
T ss_pred             eEEEeecccceeccCCcceeeccceecccccCCHHHHcc-CCCCcccccccHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Confidence            999999999976533222  2233468899999999987 6789999999999999999998 57888888877777665


Q ss_pred             HHcCCCCCCcccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhc------
Q 035861          232 KTLGTPTETIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALN------  305 (332)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~------  305 (332)
                      +....                                    ..++.+++.+.+||.+||+.||++|||+++|++      
T Consensus       250 ~~~~~------------------------------------~~p~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~~~  293 (308)
T d1p4oa_         250 EGGLL------------------------------------DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEM  293 (308)
T ss_dssp             TTCCC------------------------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGS
T ss_pred             hCCCC------------------------------------CCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhc
Confidence            43211                                    112337889999999999999999999999998      


Q ss_pred             CCCCCCCCC
Q 035861          306 HYWFHEVPL  314 (332)
Q Consensus       306 hp~f~~~~~  314 (332)
                      +|+|++++.
T Consensus       294 ~~~~~~~~~  302 (308)
T d1p4oa_         294 EPGFREVSF  302 (308)
T ss_dssp             CTTHHHHCS
T ss_pred             CCCCcCCCC
Confidence            788876553


No 59 
>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=5.9e-49  Score=338.59  Aligned_cols=252  Identities=21%  Similarity=0.322  Sum_probs=202.5

Q ss_pred             hhcccccccccccCcEEEEEEEEC-----CCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhC-CCCCeeeeee
Q 035861           10 VFEFEKLNKISEGTYGIVYRARDK-----KSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSF-DHPSIVNVKE   83 (332)
Q Consensus        10 ~~~y~~~~~lg~g~~g~v~~~~~~-----~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~   83 (332)
                      .++|++.+.||+|+||.||+|++.     .+++.||||++........       ...+.+|+.+++.+ +||||+++++
T Consensus        22 ~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~-------~~~~~~E~~~~~~l~~HpnIv~~~g   94 (311)
T d1t46a_          22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTE-------REALMSELKVLSYLGNHMNIVNLLG   94 (311)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHH-------HHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred             HHHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHH-------HHHHHHHHHHHHhccCCCCEEEEEE
Confidence            368999999999999999999863     4667899999975432211       12467899999998 6999999999


Q ss_pred             eEEcCCCeEEEEccccccc-HHHHHHhc-----------------CCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCC
Q 035861           84 VVMDDHDSVYMVMEYMEHD-LKWLMESM-----------------KQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKT  145 (332)
Q Consensus        84 ~~~~~~~~~~lv~e~~~~~-l~~~~~~~-----------------~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p  145 (332)
                      ++. +....++||||++|+ +.+.+...                 ...+++..+..++.||+.||+|||++|++||||||
T Consensus        95 ~~~-~~~~~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~~ivHrDLKp  173 (311)
T d1t46a_          95 ACT-IGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAA  173 (311)
T ss_dssp             EEC-SSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSG
T ss_pred             EEe-eCCEEEEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCeeeccccc
Confidence            994 447789999999864 44444432                 22589999999999999999999999999999999


Q ss_pred             CCEEEcCCCcEEEeecccccccCCCCC--CCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCC
Q 035861          146 SNLLLNNQGVLKICDFGMSRQYGSPLK--PYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLA-KKPLFSGTT  222 (332)
Q Consensus       146 ~Nili~~~~~~~l~df~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~llt-g~~pf~~~~  222 (332)
                      +||+++.++.++++|||.+........  ......||+.|+|||.+.+ ..++.++||||||+++|+|+| |.+||...+
T Consensus       174 ~NIl~~~~~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DIwS~G~~l~ellt~g~p~~~~~~  252 (311)
T d1t46a_         174 RNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFN-CVYTFESDVWSYGIFLWELFSLGSSPYPGMP  252 (311)
T ss_dssp             GGEEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTTCCSSTTCC
T ss_pred             ccccccccCcccccccchheeccCCCcceEeeecccChHHcCHHHhcC-CCCCCcccccchHHHHHHHHhCCCCCCCCCC
Confidence            999999999999999999987643322  2344678999999999987 678999999999999999998 566666666


Q ss_pred             hHHHHHHHHHHcCCCCCCcccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHH
Q 035861          223 EVDQIDKIFKTLGTPTETIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDD  302 (332)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e  302 (332)
                      ..+...++......+.                                   .+..++.++.+||.+||+.||.+|||+++
T Consensus       253 ~~~~~~~~i~~~~~~~-----------------------------------~~~~~~~~l~~Li~~cl~~dP~~RPs~~~  297 (311)
T d1t46a_         253 VDSKFYKMIKEGFRML-----------------------------------SPEHAPAEMYDIMKTCWDADPLKRPTFKQ  297 (311)
T ss_dssp             SSHHHHHHHHHTCCCC-----------------------------------CCTTSCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             HHHHHHHHHhcCCCCC-----------------------------------CcccccHHHHHHHHHHcCCChhHCcCHHH
Confidence            6555555554321111                                   12237899999999999999999999999


Q ss_pred             Hhc
Q 035861          303 ALN  305 (332)
Q Consensus       303 ll~  305 (332)
                      |++
T Consensus       298 il~  300 (311)
T d1t46a_         298 IVQ  300 (311)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            985


No 60 
>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=100.00  E-value=1.3e-47  Score=327.37  Aligned_cols=250  Identities=19%  Similarity=0.261  Sum_probs=202.0

Q ss_pred             hcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCC-CCeeeeeeeEEcCC
Q 035861           11 FEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDH-PSIVNVKEVVMDDH   89 (332)
Q Consensus        11 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h-~~i~~~~~~~~~~~   89 (332)
                      ++|++++.||+|+||+||+|++..+|+.||||++......          ..+.+|++.++.+.| +|++.+++++. ..
T Consensus         5 ~~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~----------~~~~~e~~~~~~l~~~~~i~~~~~~~~-~~   73 (293)
T d1csna_           5 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDA----------PQLRDEYRTYKLLAGCTGIPNVYYFGQ-EG   73 (293)
T ss_dssp             TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTTS----------CCHHHHHHHHHHTTTCTTCCCEEEEEE-ET
T ss_pred             CceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEccccCc----------HHHHHHHHHHHHhcCCCCCCEEEEEee-cC
Confidence            4899999999999999999999999999999988654321          145689999999965 88888888884 45


Q ss_pred             CeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcC-----CCcEEEeecccc
Q 035861           90 DSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNN-----QGVLKICDFGMS  164 (332)
Q Consensus        90 ~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~-----~~~~~l~df~~~  164 (332)
                      ...++|||++++++.+.+......+++..+..++.|++.||+|||++||+||||||+||+++.     ++.++|+|||++
T Consensus        74 ~~~~~vme~~~~~l~~~~~~~~~~~~~~~~~~i~~q~~~~l~~lH~~giiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a  153 (293)
T d1csna_          74 LHNVLVIDLLGPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMV  153 (293)
T ss_dssp             TEEEEEEECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTC
T ss_pred             CccEEEEEecCCCHHHHHHhhccchhhHHHHHHHHHHHHHHHHHHHCCceeccCCccceeecCcccccCCceEEccccee
Confidence            889999999999998888877778999999999999999999999999999999999999974     578999999999


Q ss_pred             cccCCCC-------CCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCh---HHHHHHHHHHc
Q 035861          165 RQYGSPL-------KPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTE---VDQIDKIFKTL  234 (332)
Q Consensus       165 ~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~~---~~~~~~~~~~~  234 (332)
                      .......       .......||+.|+|||++.+ ..++.++|+||||+++|+|++|..||.....   ......+....
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~GT~~y~aPE~~~~-~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~i~~~~  232 (293)
T d1csna_         154 KFYRDPVTKQHIPYREKKNLSGTARYMSINTHLG-REQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKK  232 (293)
T ss_dssp             EESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTT-CCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHH
T ss_pred             EEcccCccccceeecccCceEEchhhcCHHHhcC-CCCChHHHHHHhhHHHHHHHhCCCcCCCccchhHHHHHHHHHhcc
Confidence            8653221       12345679999999999987 6799999999999999999999999975433   22233332211


Q ss_pred             -CCCCCCcccCCCCCccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCCCCCCCHHHHhc
Q 035861          235 -GTPTETIWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALN  305 (332)
Q Consensus       235 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~  305 (332)
                       ..+..                                 ...+.+++++.+++..|++.+|++||+.+.+.+
T Consensus       233 ~~~~~~---------------------------------~l~~~~p~~l~~ii~~~~~~~~~~rP~y~~l~~  271 (293)
T d1csna_         233 QSTPLR---------------------------------ELCAGFPEEFYKYMHYARNLAFDATPDYDYLQG  271 (293)
T ss_dssp             HHSCHH---------------------------------HHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHH
T ss_pred             CCCChH---------------------------------HhcCCCCHHHHHHHHHHhcCCcccCcCHHHHHH
Confidence             00000                                 012337889999999999999999998666543


No 61 
>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=3.5e-47  Score=325.97  Aligned_cols=259  Identities=21%  Similarity=0.232  Sum_probs=184.6

Q ss_pred             hcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchh--HHHHHHhhCCCCCeeeeeeeEEcC
Q 035861           11 FEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSL--REINILLSFDHPSIVNVKEVVMDD   88 (332)
Q Consensus        11 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~--~e~~~l~~l~h~~i~~~~~~~~~~   88 (332)
                      .+|.+.+.||+|+||+||+|+..  |+.||||++......           ...  .|+..+..++||||+++++++..+
T Consensus         3 ~~~~l~~~iG~G~fg~Vy~~~~~--g~~vAvK~~~~~~~~-----------~~~~e~ei~~~~~~~HpnIv~~~~~~~~~   69 (303)
T d1vjya_           3 RTIVLQESIGKGRFGEVWRGKWR--GEEVAVKIFSSREER-----------SWFREAEIYQTVMLRHENILGFIAADNKD   69 (303)
T ss_dssp             GGEEEEEEEECCSSSEEEEEEET--TEEEEEEEECGGGHH-----------HHHHHHHHHTSTTCCCTTBCCEEEEEEEE
T ss_pred             cEEEEEEEEeeCCCeEEEEEEEC--CEEEEEEEECccchh-----------HHHHHHHHHHHhhCCCCcCcceEEEEEeC
Confidence            47889999999999999999975  889999998643211           122  345555678999999999999654


Q ss_pred             C---CeEEEEcccccc-cHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH--------CCcccccCCCCCEEEcCCCcE
Q 035861           89 H---DSVYMVMEYMEH-DLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHD--------NWVLHRDLKTSNLLLNNQGVL  156 (332)
Q Consensus        89 ~---~~~~lv~e~~~~-~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~--------~~i~H~di~p~Nili~~~~~~  156 (332)
                      .   ...|+||||+++ ++.+.+..  .++++..+..++.|++.||+|||+        +||+||||||+||||+.++.+
T Consensus        70 ~~~~~~~~lv~Ey~~~g~L~~~l~~--~~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~~~~  147 (303)
T d1vjya_          70 NGTWTQLWLVSDYHEHGSLFDYLNR--YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTC  147 (303)
T ss_dssp             CSSSEEEEEEEECCTTCBHHHHHHH--CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECTTSCE
T ss_pred             CCcceEEEEEEecccCCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEEcCCCCe
Confidence            3   258999999986 55555543  469999999999999999999996        599999999999999999999


Q ss_pred             EEeecccccccCCCCC----CCccccccccccchhhhcCCC-----CCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHH
Q 035861          157 KICDFGMSRQYGSPLK----PYTSLVVTLWYRAPELLLGAK-----KYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQI  227 (332)
Q Consensus       157 ~l~df~~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~-----~~~~~sDi~slG~~l~~lltg~~pf~~~~~~~~~  227 (332)
                      ||+|||++........    ......||+.|+|||++.+..     .++.++||||||+++|||+||..||.........
T Consensus       148 Kl~DFGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~  227 (303)
T d1vjya_         148 CIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLP  227 (303)
T ss_dssp             EECCCTTCEEEETTTTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCT
T ss_pred             EEEecCccccccCCCcceeccccceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCCcccccccc
Confidence            9999999887643222    233567899999999987532     2577899999999999999999887543211000


Q ss_pred             HHHHHHcCCCCCCcccCCCCCccccccccCCchhhhhhhCCC--CccCC-----CCCCCchHHHHHHHhcCCCCCCCCCH
Q 035861          228 DKIFKTLGTPTETIWPGLSELPGAKANFAKQPYNLLRKRFPA--ASFTG-----SPVLSESGFDLLNRLLTYDPEKRITV  300 (332)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-----~~~~~~~~~~li~~~l~~dp~~Rps~  300 (332)
                                    .....        ...............  .....     .......+.+|+.+||+.||++|||+
T Consensus       228 --------------~~~~~--------~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~  285 (303)
T d1vjya_         228 --------------YYDLV--------PSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTA  285 (303)
T ss_dssp             --------------TTTTS--------CSSCCHHHHHHHHTTSCCCCCCCGGGGGCHHHHHHHHHHHTTCCSSGGGSCCH
T ss_pred             --------------hhhcc--------cccchHHHHHHHHhccccCCCCCcccCChHHHHHHHHHHHHHcccCHhHCcCH
Confidence                          00000        000000000000000  00000     01123458899999999999999999


Q ss_pred             HHHhcC
Q 035861          301 DDALNH  306 (332)
Q Consensus       301 ~ell~h  306 (332)
                      .||+++
T Consensus       286 ~ei~~~  291 (303)
T d1vjya_         286 LRIKKT  291 (303)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            999863


No 62 
>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00  E-value=1e-46  Score=332.27  Aligned_cols=285  Identities=25%  Similarity=0.371  Sum_probs=201.1

Q ss_pred             cccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCC-----------CCCeee
Q 035861           12 EFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFD-----------HPSIVN   80 (332)
Q Consensus        12 ~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-----------h~~i~~   80 (332)
                      +|++++.||+|+||+||+|++..+|+.||||++.......         ....+|+.+++.+.           |+||++
T Consensus        14 rY~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~~~~---------~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~   84 (362)
T d1q8ya_          14 RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYT---------EAAEDEIKLLQRVNDADNTKEDSMGANHILK   84 (362)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHH---------HHHHHHHHHHHHHHHTCCSHHHHHHHTTBCC
T ss_pred             cEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeccccch---------HHHHHHHHHHHHhcchhhhhhhhcCcCceEE
Confidence            6999999999999999999999999999999997542211         13457888777764           578998


Q ss_pred             eeeeEEc-CCCeEEEEcccc--cccHHH-HHHhcCCCCCHHHHHHHHHHHHHHHHHHHH-CCcccccCCCCCEEEcCCC-
Q 035861           81 VKEVVMD-DHDSVYMVMEYM--EHDLKW-LMESMKQPFSTSEVKCLMLQLLEGVKYLHD-NWVLHRDLKTSNLLLNNQG-  154 (332)
Q Consensus        81 ~~~~~~~-~~~~~~lv~e~~--~~~l~~-~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~-~~i~H~di~p~Nili~~~~-  154 (332)
                      +++++.. +....++++.++  .++... ........+++..++.++.||+.||+|||+ .||+|+||||+|||++.++ 
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~~IvHrDlKp~NIll~~~~~  164 (362)
T d1q8ya_          85 LLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDS  164 (362)
T ss_dssp             CCEEEEEEETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEET
T ss_pred             EEEEeeeccccceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhhhcCcccccCChhHeeeeccCc
Confidence            9888743 234444555444  344333 334445779999999999999999999997 8999999999999998765 


Q ss_pred             -----cEEEeecccccccCCCCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC------h
Q 035861          155 -----VLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTT------E  223 (332)
Q Consensus       155 -----~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~~lltg~~pf~~~~------~  223 (332)
                           .++++|||.+.....   ......|++.|+|||++.. ..++.++|+||+|+++++|++|+.||....      .
T Consensus       165 ~~~~~~~kl~dfg~s~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~el~~g~~pF~~~~~~~~~~~  240 (362)
T d1q8ya_         165 PENLIQIKIADLGNACWYDE---HYTNSIQTREYRSPEVLLG-APWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKD  240 (362)
T ss_dssp             TTTEEEEEECCCTTCEETTB---CCCSCCSCGGGCCHHHHHT-CCCCTHHHHHHHHHHHHHHHHSSCCC---------CH
T ss_pred             ccccceeeEeeccccccccc---ccccccccccccChhhccc-cCCCccccccchHHHHHHHHHCCCCCCCCccccccch
Confidence                 499999999876532   2345679999999999987 678999999999999999999999997542      3


Q ss_pred             HHHHHHHHHHcCCCCCCcccCCCCC---------ccccccccCCchhhhhhhCCCCccCCCCCCCchHHHHHHHhcCCCC
Q 035861          224 VDQIDKIFKTLGTPTETIWPGLSEL---------PGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDP  294 (332)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp  294 (332)
                      .+.....+...+.++..........         .................    .........++++++||.+||.+||
T Consensus       241 ~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~dll~~mL~~dP  316 (362)
T d1q8ya_         241 DDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLT----EKYKFSKDEAKEISDFLSPMLQLDP  316 (362)
T ss_dssp             HHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHH----HTTCCCHHHHHHHHHHHGGGGCSST
T ss_pred             hHHHHHHHHHhCCCCHHHhhcccccccccccchhhhccccccCCchhhhcc----cccccCcccCHHHHHHHHHHCCCCh
Confidence            3444445555554433322111000         00000000000000000    0111223357789999999999999


Q ss_pred             CCCCCHHHHhcCCCCCCCC
Q 035861          295 EKRITVDDALNHYWFHEVP  313 (332)
Q Consensus       295 ~~Rps~~ell~hp~f~~~~  313 (332)
                      .+|||++|+|+||||++..
T Consensus       317 ~~Rpta~e~L~Hp~f~~~~  335 (362)
T d1q8ya_         317 RKRADAGGLVNHPWLKDTL  335 (362)
T ss_dssp             TTCBCHHHHHTCGGGTTCT
T ss_pred             hHCcCHHHHhcCcccCCCC
Confidence            9999999999999999654


No 63 
>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=99.92  E-value=8.8e-26  Score=179.53  Aligned_cols=178  Identities=16%  Similarity=0.080  Sum_probs=120.9

Q ss_pred             ccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccc----------cCCCcchhHHHHHHhhCCCCCeeeee
Q 035861           13 FEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLE----------YGFPISSLREINILLSFDHPSIVNVK   82 (332)
Q Consensus        13 y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~----------~~~~~~~~~e~~~l~~l~h~~i~~~~   82 (332)
                      +.+.+.||+|+||+||+|.+. +|+.||||+++...........          .........|...+.++.|.+++..+
T Consensus         2 ~~vg~~IG~G~~g~Vy~a~~~-~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~~~   80 (191)
T d1zara2           2 DAIGKLMGEGKESAVFNCYSE-KFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVY   80 (191)
T ss_dssp             SEEEEEEEECSSEEEEEEEET-TTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCEE
T ss_pred             chhCCEeeeCcceEEEEEECC-CCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCcceEE
Confidence            457899999999999999984 6899999988643221111000          00011234578888899999988776


Q ss_pred             eeEEcCCCeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCCCCEEEcCCCcEEEeecc
Q 035861           83 EVVMDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFG  162 (332)
Q Consensus        83 ~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~~~i~H~di~p~Nili~~~~~~~l~df~  162 (332)
                      +..  .   .+++||++++..       ...++...+..++.|++.+|++||++||+|+||||+|||++++ .++|+|||
T Consensus        81 ~~~--~---~~lvme~~~~~~-------~~~l~~~~~~~i~~ql~~~l~~lH~~giiHrDiKP~NILv~~~-~~~liDFG  147 (191)
T d1zara2          81 AWE--G---NAVLMELIDAKE-------LYRVRVENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVSEE-GIWIIDFP  147 (191)
T ss_dssp             EEE--T---TEEEEECCCCEE-------GGGCCCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEETT-EEEECCCT
T ss_pred             Eec--C---CEEEEEeecccc-------ccchhhHHHHHHHHHHHHHHHHHhhCCEEEccCChhheeeeCC-CEEEEECC
Confidence            553  2   269999999853       2235667778899999999999999999999999999999965 58999999


Q ss_pred             cccccCCCCCCCccccccccccchhhhcCCCCCCchhHHHHHHHHH
Q 035861          163 MSRQYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIM  208 (332)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l  208 (332)
                      .+...+.+..  ......-...-.+.+.  +.++.++|+||+.--+
T Consensus       148 ~a~~~~~~~~--~~~l~rd~~~~~~~f~--r~y~~~~d~~s~~~~~  189 (191)
T d1zara2         148 QSVEVGEEGW--REILERDVRNIITYFS--RTYRTEKDINSAIDRI  189 (191)
T ss_dssp             TCEETTSTTH--HHHHHHHHHHHHHHHH--HHHCCCCCHHHHHHHH
T ss_pred             CcccCCCCCc--HHHHHHHHHHHHHHHc--CCCCCcccHHHHHHHH
Confidence            9876542211  0000000000012222  4578889999986544


No 64 
>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}
Probab=98.67  E-value=4.9e-08  Score=79.61  Aligned_cols=141  Identities=16%  Similarity=0.152  Sum_probs=89.0

Q ss_pred             hhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCC-CCCeeeeeeeEEcC
Q 035861           10 VFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFD-HPSIVNVKEVVMDD   88 (332)
Q Consensus        10 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~   88 (332)
                      +..|+..+..+.++.+.||++..  ++..+++|+.........        ..+..|...+..+. +--+..++... ++
T Consensus        13 ~~~~~~~~~~~G~s~~~v~rv~~--~~~~~vlk~~~~~~~~~~--------~~~~~E~~~l~~l~~~vpvP~vl~~~-~~   81 (263)
T d1j7la_          13 IEKYRCVKDTEGMSPAKVYKLVG--ENENLYLKMTDSRYKGTT--------YDVEREKDMMLWLEGKLPVPKVLHFE-RH   81 (263)
T ss_dssp             HTTSEEEECSCCCSSSEEEEEEC--SSCEEEEEEECGGGTTST--------TCHHHHHHHHHHHTTTSCCCCEEEEE-EE
T ss_pred             hhceEEEEcCCCCCCCcEEEEEe--CCCeEEEEEcCCCcccch--------hhHHHHHHHHHHHhccCCCCcEEEEE-ec
Confidence            45777777766677789999864  366788888765433221        13457887776663 22234444444 44


Q ss_pred             CCeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH---------------------------------
Q 035861           89 HDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVKYLHD---------------------------------  135 (332)
Q Consensus        89 ~~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~~lh~---------------------------------  135 (332)
                      ++..++||++++|........     +......++.+++..++.||+                                 
T Consensus        82 ~~~~~lv~~~l~G~~~~~~~~-----~~~~~~~~~~~l~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (263)
T d1j7la_          82 DGWSNLLMSEADGVLCSEEYE-----DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCE  156 (263)
T ss_dssp             TTEEEEEEECCSSEEHHHHTT-----TCSCHHHHHHHHHHHHHHHHTSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCCGG
T ss_pred             CCceEEEEEeccccccccccc-----ccccHHHHHHHHHHHHHHHhccCccccccCcchhhhhhhHHHHHHHHhhhhhhh
Confidence            477899999999854332211     111222334444455555553                                 


Q ss_pred             --------------------------CCcccccCCCCCEEEcCCCcEEEeecccccc
Q 035861          136 --------------------------NWVLHRDLKTSNLLLNNQGVLKICDFGMSRQ  166 (332)
Q Consensus       136 --------------------------~~i~H~di~p~Nili~~~~~~~l~df~~~~~  166 (332)
                                                ..++|||+.|.||++++++.+-|+||+.+..
T Consensus       157 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDwe~a~~  213 (263)
T d1j7la_         157 NWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR  213 (263)
T ss_dssp             GGSTTCSCSSHHHHHHHHHHSCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred             cccccccchHHHHHHHHHHhcCCcCCcEEEEeeccCcceeecCCceEEEeechhccc
Confidence                                      1278999999999999876667999997753


No 65 
>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}
Probab=98.22  E-value=1e-06  Score=75.95  Aligned_cols=82  Identities=17%  Similarity=0.181  Sum_probs=45.1

Q ss_pred             cccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhC-C-CCC-eeeeeeeEEcCCCeE
Q 035861           16 LNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSF-D-HPS-IVNVKEVVMDDHDSV   92 (332)
Q Consensus        16 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~-h~~-i~~~~~~~~~~~~~~   92 (332)
                      .+.||.|....||++....+++.++||.-............ ....+...|.+.++.+ . .|. +..++. + +. ...
T Consensus        31 ~~eig~G~~N~vfrV~~~~~~~svivKqa~p~~r~~g~~~~-~~~~R~~~E~~~L~~~~~~~p~~vP~v~~-~-d~-~~~  106 (392)
T d2pula1          31 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWP-LTIDRARIESSALIRQGEHVPHLVPRVFY-S-DT-EMA  106 (392)
T ss_dssp             EEECCSSSSEEEEEEEC----CEEEEEEECCGGGC--CCCC-CCTTHHHHHHHHHHHHHTTCGGGSCCEEE-E-ET-TTT
T ss_pred             EEEeCCCceEeEEEEEeCCCCeEEEEecCCchhcccCCCCC-CCHHHHHHHHHHHHHhhhhCCCCcceEEE-E-cC-CCC
Confidence            45689999999999998777888999976432211100000 0011234678777766 2 233 333433 3 22 334


Q ss_pred             EEEcccccc
Q 035861           93 YMVMEYMEH  101 (332)
Q Consensus        93 ~lv~e~~~~  101 (332)
                      ++|||++++
T Consensus       107 ~lvmE~L~~  115 (392)
T d2pula1         107 VTVMEDLSH  115 (392)
T ss_dssp             EEEECCCTT
T ss_pred             EEEEeccCC
Confidence            689999975


No 66 
>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}
Probab=98.12  E-value=4.2e-06  Score=67.40  Aligned_cols=72  Identities=13%  Similarity=0.103  Sum_probs=44.9

Q ss_pred             cccccC-cEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCC--eeeeeeeEEcCCCeEEE
Q 035861           18 KISEGT-YGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPS--IVNVKEVVMDDHDSVYM   94 (332)
Q Consensus        18 ~lg~g~-~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~--i~~~~~~~~~~~~~~~l   94 (332)
                      .+..|. .+.||+.... .+..+++|.......           ..+..|...++.+....  +..++... .+.+..++
T Consensus        17 ~~~~G~s~~~v~r~~~~-~~~~~vlK~~~~~~~-----------~~l~~E~~~l~~L~~~gvpvP~v~~~~-~~~~~~~~   83 (255)
T d1nd4a_          17 QQTIGCSDAAVFRLSAQ-GRPVLFVKTDLSGAL-----------NELQDEAARLSWLATTGVPCAAVLDVV-TEAGRDWL   83 (255)
T ss_dssp             ECSCTTSSCEEEEEECT-TSCCEEEEEECSCTT-----------SCHHHHHHHHHHHHTTTCCBCCEEEEE-ECSSCEEE
T ss_pred             EcCCcccCCeEEEEEeC-CCCEEEEEeCCccCH-----------hHHHHHHHHHHHHHhcCCCCCceeeec-ccccceEE
Confidence            334444 4689998764 466688887654321           13457888877663322  34445554 44577899


Q ss_pred             Eccccccc
Q 035861           95 VMEYMEHD  102 (332)
Q Consensus        95 v~e~~~~~  102 (332)
                      ||++++|.
T Consensus        84 v~~~i~G~   91 (255)
T d1nd4a_          84 LLGEVPGQ   91 (255)
T ss_dssp             EEECCSSE
T ss_pred             EEEeeecc
Confidence            99999873


No 67 
>d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]}
Probab=97.40  E-value=0.00024  Score=60.74  Aligned_cols=71  Identities=14%  Similarity=0.173  Sum_probs=45.0

Q ss_pred             cccccccCcEEEEEEEECC-------CCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCee-eeeeeEEc
Q 035861           16 LNKISEGTYGIVYRARDKK-------SGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIV-NVKEVVMD   87 (332)
Q Consensus        16 ~~~lg~g~~g~v~~~~~~~-------~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~-~~~~~~~~   87 (332)
                      ++.|+.|-...+|++....       .++.|++++.-...  ...        ...+|..+++.+.-.++. ++++.+ +
T Consensus        47 v~~l~GGltN~~y~v~~~~~~~~~~~~~~~vllRi~g~~~--~~i--------dr~~E~~i~~~ls~~gl~Pkll~~~-~  115 (395)
T d1nw1a_          47 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPE--TES--------HLVAESVIFTLLSERHLGPKLYGIF-S  115 (395)
T ss_dssp             EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCC--CHH--------HHHHHHHHHHHHHHTTSSSCEEEEE-T
T ss_pred             EEEcCCccccceEEEEeCCCCccccCCCCcEEEEecCCcc--hhh--------HHHHHHHHHHHHHhCCCCCeEEEEc-C
Confidence            4678899999999998653       34567777765221  111        123688888777433443 455554 4


Q ss_pred             CCCeEEEEcccccc
Q 035861           88 DHDSVYMVMEYMEH  101 (332)
Q Consensus        88 ~~~~~~lv~e~~~~  101 (332)
                      +    .+|+||++|
T Consensus       116 ~----g~I~efi~g  125 (395)
T d1nw1a_         116 G----GRLEEYIPS  125 (395)
T ss_dssp             T----EEEECCCCE
T ss_pred             C----ceEEEEecc
Confidence            3    588999987


No 68 
>d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]}
Probab=97.36  E-value=0.00023  Score=59.22  Aligned_cols=68  Identities=13%  Similarity=0.184  Sum_probs=40.1

Q ss_pred             cEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCe-----eeee-eeEEcCCCeEEEEcc
Q 035861           24 YGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSI-----VNVK-EVVMDDHDSVYMVME   97 (332)
Q Consensus        24 ~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~-~~~~~~~~~~~lv~e   97 (332)
                      ...||++... +|..+++|+.+.......         .+..|...+..|...++     +..- +.........+.+++
T Consensus        35 EN~vy~v~~~-dg~~~VlK~~rp~~~s~~---------~i~~E~~~l~~L~~~gipv~~p~~~~g~~~~~~~~~~~~l~~  104 (325)
T d1zyla1          35 ENRVYQFQDE-DRRRFVVKFYRPERWTAD---------QILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFP  104 (325)
T ss_dssp             SSEEEEECCT-TCCCEEEEEECTTTSCHH---------HHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEE
T ss_pred             cceeEEEEcC-CCCEEEEEEeCCCCCCHH---------HHHHHHHHHHHHHhcCCCCCCceecCCCeeeeeeeEEEEEEe
Confidence            4689999773 588899999875433222         35567777766632222     1111 111123456788888


Q ss_pred             cccc
Q 035861           98 YMEH  101 (332)
Q Consensus        98 ~~~~  101 (332)
                      +++|
T Consensus       105 ~~~G  108 (325)
T d1zyla1         105 SVGG  108 (325)
T ss_dssp             CCCC
T ss_pred             ecCC
Confidence            8876


No 69 
>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}
Probab=97.05  E-value=0.00012  Score=60.51  Aligned_cols=31  Identities=23%  Similarity=0.319  Sum_probs=27.4

Q ss_pred             CCcccccCCCCCEEEcCCCcEEEeecccccc
Q 035861          136 NWVLHRDLKTSNLLLNNQGVLKICDFGMSRQ  166 (332)
Q Consensus       136 ~~i~H~di~p~Nili~~~~~~~l~df~~~~~  166 (332)
                      .|++|||+.++||+++++...-|+||+.+..
T Consensus       183 ~giIHgDl~~dNvl~~~~~v~gvIDF~~~~~  213 (316)
T d2ppqa1         183 AGVIHADLFQDNVFFLGDELSGLIDFYFACN  213 (316)
T ss_dssp             EEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred             cccccCCcchhhhhcccccceeEeccccccc
Confidence            4699999999999999987778999998753


No 70 
>d1e7ua4 d.144.1.4 (A:726-1094) Phoshoinositide 3-kinase (PI3K), catalytic domain {Pig (Sus scrofa) [TaxId: 9823]}
Probab=49.97  E-value=3.6  Score=33.53  Aligned_cols=27  Identities=26%  Similarity=0.356  Sum_probs=22.9

Q ss_pred             cccCCCCCEEEcCCCcEEEeecccccc
Q 035861          140 HRDLKTSNLLLNNQGVLKICDFGMSRQ  166 (332)
Q Consensus       140 H~di~p~Nili~~~~~~~l~df~~~~~  166 (332)
                      -||=+++||+|+.+|++.-+|||...-
T Consensus       219 igDRH~~NILi~~~G~l~HIDFG~il~  245 (369)
T d1e7ua4         219 IGDRHNDNIMISETGNLFHIDFGHILG  245 (369)
T ss_dssp             CCCCCGGGEEEETTCCEEECCCCCC--
T ss_pred             cCCCCCCeeEEeCCCCEEecchhhhhc
Confidence            468899999999999999999998753


No 71 
>d1cjaa_ d.144.1.3 (A:) Actin-fragmin kinase, catalytic domain {Physarum polycephalum [TaxId: 5791]}
Probab=25.85  E-value=31  Score=26.95  Aligned_cols=137  Identities=14%  Similarity=0.167  Sum_probs=68.8

Q ss_pred             hhcccccccccccCcEEEEEEEECCCCcEEEEEEeecccCCcccccccCCCcchhHHHHHHhhCCCCCeeeeeeeE----
Q 035861           10 VFEFEKLNKISEGTYGIVYRARDKKSGEIVALKKVKMNVGRKEDCLEYGFPISSLREINILLSFDHPSIVNVKEVV----   85 (332)
Q Consensus        10 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~----   85 (332)
                      +++++-++.=-.|+.|..|. ...  +..++||.-.. .     ..+     .+..++...-.++.|....+.-.-    
T Consensus        68 l~~~K~i~~s~~Gs~Gv~FV-~~e--~gaiVlK~s~t-t-----a~E-----~y~~eLAr~LGvpvPqmRvI~~~~~E~~  133 (342)
T d1cjaa_          68 LQQFKGIERSEKGTEGLFFV-ETE--SGVFIVKRSTN-I-----ESE-----TFCSLLCMRLGLHAPKVRVVSSNSEEGT  133 (342)
T ss_dssp             GGGEEEEEECCSTTSCEEEE-EES--SCEEEEECCTT-H-----HHH-----HHHHHHHHHHTCCCCCEEEEESSSHHHH
T ss_pred             HHhhhceEEeecCCceEEEE-EcC--CceEEEecCCc-h-----HHH-----HHHHHHHHHhCCCCCceEEecCCCHHHH
Confidence            34555555555566665554 332  55688886321 1     001     233455555566777776654110    


Q ss_pred             -----------------EcCCCeEEEEcccccccHHHHHHhcCCCCCHHHHHHHHHHHHHHHH---HHHHC---Cccccc
Q 035861           86 -----------------MDDHDSVYMVMEYMEHDLKWLMESMKQPFSTSEVKCLMLQLLEGVK---YLHDN---WVLHRD  142 (332)
Q Consensus        86 -----------------~~~~~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~i~~~l~~~L~---~lh~~---~i~H~d  142 (332)
                                       ..-.....++|||++|..+....  ....+.......+.++-..++   +++..   .+.+++
T Consensus       134 ~~~~~~l~~~e~d~~I~sel~~A~~liMeYvpG~~l~e~~--~~~a~~~fs~~~l~~LGkIiaFDifInN~DR~PL~Wrn  211 (342)
T d1cjaa_         134 NMLECLAAIDKSFRVITTLANQANILLMELVRGITLNKLT--TTSAPEVLTKSTMQQLGSLMALDVIVNNSDRLPIAWTN  211 (342)
T ss_dssp             HHHHHHHHHCSSSCHHHHHTTCSEEEEEECCCEEESTTCC--SSSHHHHSCHHHHHHHHHHHHHHHHHTCCSSSCSSSCS
T ss_pred             HHHHHHhcCCChhHHHHHHHhcccceeeeccCCccccccc--cccchhhhcHHHHHHhhhHHHHHHHHcCCccccccccC
Confidence                             00123478999999985422111  111122222333444322222   24422   245442


Q ss_pred             -CCCCCEEEcCCC-cEEEeecc
Q 035861          143 -LKTSNLLLNNQG-VLKICDFG  162 (332)
Q Consensus       143 -i~p~Nili~~~~-~~~l~df~  162 (332)
                       =++.||+++.++ .+..+|=+
T Consensus       212 ~GN~~Niml~~n~~~~~~IDs~  233 (342)
T d1cjaa_         212 EGNLDNIMLSERGATVVPIDSK  233 (342)
T ss_dssp             CCCGGGEEEESBTTCEEECSCC
T ss_pred             CCCccceEEecCCcEEEEecCC
Confidence             289999999877 67777733


No 72 
>d1kq8a_ a.4.5.14 (A:) HFH-1 (HNF-3 forkhead homolog-1) {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=23.94  E-value=18  Score=21.46  Aligned_cols=28  Identities=14%  Similarity=0.255  Sum_probs=23.6

Q ss_pred             HHHHHhcCCCCCCCCCHHHHhc-----CCCCCC
Q 035861          284 DLLNRLLTYDPEKRITVDDALN-----HYWFHE  311 (332)
Q Consensus       284 ~li~~~l~~dp~~Rps~~ell~-----hp~f~~  311 (332)
                      .||...+...|+.|.++.||.+     .|||+.
T Consensus         3 ~LI~~Ai~~sp~~~ltL~eIy~~i~~~fpy~r~   35 (75)
T d1kq8a_           3 ALITMAIRDSAGGRLTLAEINEYLMGKFPFFRG   35 (75)
T ss_dssp             HHHHHHHTTSSSSCBCHHHHHHHHHHHCTTGGG
T ss_pred             HHHHHHHHhCCCCCccHHHHHHHHHHhCccccc
Confidence            6888888889999999999965     488875


No 73 
>d1d0da_ g.8.1.2 (A:) Anticoagulant protein, factor Xa inhibitor {Soft tick (Ornithodoros moubata) [TaxId: 6938]}
Probab=23.36  E-value=18  Score=19.49  Aligned_cols=26  Identities=27%  Similarity=0.370  Sum_probs=21.4

Q ss_pred             cccccchhhhcCCCCCCchhHHHHHH
Q 035861          180 TLWYRAPELLLGAKKYSTAVDMWSVG  205 (332)
Q Consensus       180 ~~~y~aPE~~~~~~~~~~~sDi~slG  205 (332)
                      .+.|..||--.+...++.+-|.++..
T Consensus        34 ~~fwicpe~~~g~dyyss~~dc~~ac   59 (60)
T d1d0da_          34 DSFWICPEDHTGADYYSSYRDCFNAC   59 (60)
T ss_dssp             EEEEECTTTCCSCCCCCSHHHHHHHH
T ss_pred             CcceECCccCCCccchhhHHHHHHhh
Confidence            46799999988888889999988753


Done!