BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 035862
(393 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 204 bits (519), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 117/303 (38%), Positives = 176/303 (58%), Gaps = 16/303 (5%)
Query: 64 MQELREATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLA 123
+ +L EATN F+ IG G FG VYKG +R DG VA+K+ QG +++
Sbjct: 31 LVDLEEATNNFDHKFLIGHGVFGKVYKGVLR--DGAK----VALKRRTPESSQGIEEFET 84
Query: 124 EVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLP--WKT 181
E++ L HP+LV L+G+C DER + +L+Y+YM N +L+ L+ PT+ W+
Sbjct: 85 EIETLSFCRHPHLVSLIGFC---DERN-EMILIYKYMENGNLKRHLYGSDLPTMSMSWEQ 140
Query: 182 RLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHV 241
RLEI +GAA GL YLH +I+RD K+ N+LLD NF PK++DFG++++G D TH+
Sbjct: 141 RLEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHL 197
Query: 242 STAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVK 301
V GT GY PEY G L +SD++SFGVVL+E+L R + ++ P L EW
Sbjct: 198 XXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAV 257
Query: 302 QFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQE 361
+ +G + ++DP L ++ + R+ A CL + E+RP+M V+ L+ A++
Sbjct: 258 ESHNNG-QLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRL 316
Query: 362 SEQ 364
E
Sbjct: 317 QES 319
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 201 bits (510), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 116/303 (38%), Positives = 175/303 (57%), Gaps = 16/303 (5%)
Query: 64 MQELREATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLA 123
+ +L EATN F+ IG G FG VYKG +R DG VA+K+ QG +++
Sbjct: 31 LVDLEEATNNFDHKFLIGHGVFGKVYKGVLR--DGAK----VALKRRTPESSQGIEEFET 84
Query: 124 EVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLP--WKT 181
E++ L HP+LV L+G+C DER + +L+Y+YM N +L+ L+ PT+ W+
Sbjct: 85 EIETLSFCRHPHLVSLIGFC---DERN-EMILIYKYMENGNLKRHLYGSDLPTMSMSWEQ 140
Query: 182 RLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHV 241
RLEI +GAA GL YLH +I+RD K+ N+LLD NF PK++DFG++++G TH+
Sbjct: 141 RLEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHL 197
Query: 242 STAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVK 301
V GT GY PEY G L +SD++SFGVVL+E+L R + ++ P L EW
Sbjct: 198 XXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAV 257
Query: 302 QFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQE 361
+ +G + ++DP L ++ + R+ A CL + E+RP+M V+ L+ A++
Sbjct: 258 ESHNNG-QLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRL 316
Query: 362 SEQ 364
E
Sbjct: 317 QES 319
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 196 bits (497), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 119/304 (39%), Positives = 177/304 (58%), Gaps = 17/304 (5%)
Query: 58 HLRVFDMQELREATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQG 117
L+ F ++EL+ A++ F+ +G GGFG VYKG R DG +VAVK+L QG
Sbjct: 24 QLKRFSLRELQVASDNFSNKNILGRGGFGKVYKG--RLADGT----LVAVKRLKEERXQG 77
Query: 118 HK-QWLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSR--AQ 174
+ Q+ EV+ + + H NL++L G+C T ER LLVY YM N S+ L R +Q
Sbjct: 78 GELQFQTEVEMISMAVHRNLLRLRGFCMTPTER----LLVYPYMANGSVASCLRERPESQ 133
Query: 175 PTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGP 234
P L W R I LG+A GLAYLH+ + ++I+RD K +N+LLD F+ + DFGLA+
Sbjct: 134 PPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD 193
Query: 235 TGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQ 294
D HV AV GT G+ APEY+ TG ++D++ +GV+L E++TG+R + R +
Sbjct: 194 YKD-XHVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDD 252
Query: 295 K--LLEWVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVV 352
LL+WVK + KK ++D L+ Y ++ ++A C + +P ERP M++VV
Sbjct: 253 DVMLLDWVKGLLKE-KKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVV 311
Query: 353 ESLK 356
L+
Sbjct: 312 RMLE 315
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 193 bits (490), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 118/304 (38%), Positives = 175/304 (57%), Gaps = 17/304 (5%)
Query: 58 HLRVFDMQELREATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQG 117
L+ F ++EL+ A++ F +G GGFG VYKG R DG +VAVK+L QG
Sbjct: 16 QLKRFSLRELQVASDNFXNKNILGRGGFGKVYKG--RLADGX----LVAVKRLKEERTQG 69
Query: 118 HK-QWLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSR--AQ 174
+ Q+ EV+ + + H NL++L G+C T ER LLVY YM N S+ L R +Q
Sbjct: 70 GELQFQTEVEMISMAVHRNLLRLRGFCMTPTER----LLVYPYMANGSVASCLRERPESQ 125
Query: 175 PTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGP 234
P L W R I LG+A GLAYLH+ + ++I+RD K +N+LLD F+ + DFGLA+
Sbjct: 126 PPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD 185
Query: 235 TGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQ 294
D HV AV G G+ APEY+ TG ++D++ +GV+L E++TG+R + R +
Sbjct: 186 YKD-XHVXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDD 244
Query: 295 K--LLEWVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVV 352
LL+WVK + KK ++D L+ Y ++ ++A C + +P ERP M++VV
Sbjct: 245 DVMLLDWVKGLLKE-KKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVV 303
Query: 353 ESLK 356
L+
Sbjct: 304 RMLE 307
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 159 bits (401), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 112/306 (36%), Positives = 161/306 (52%), Gaps = 29/306 (9%)
Query: 62 FDMQELREATNGFNRM------LKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKL----N 111
F EL+ TN F+ K+GEGGFG VYKG + VAVKKL +
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNT-------TVAVKKLAAMVD 67
Query: 112 NHGLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFS 171
+ +Q+ E++ + H NLV+LLG+ S D+ LVY YMPN SL DRL
Sbjct: 68 ITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDL----CLVYVYMPNGSLLDRLSC 123
Query: 172 -RAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLA 230
P L W R +I GAA G+ +LHE I+RD K++N+LLD F K+SDFGLA
Sbjct: 124 LDGTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLA 180
Query: 231 REGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRP 290
R T + + +VGT Y APE + G + +SDI+SFGVVL EI+TG ++ +R
Sbjct: 181 RASEKFAQTVMXSRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEHRE 239
Query: 291 TMEQKLLEWVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQ 350
Q LL+ ++ + K ID ++ + S + + +A CL + +RP + +
Sbjct: 240 P--QLLLDIKEEIEDEEKTIEDYIDKKMNDADS-TSVEAMYSVASQCLHEKKNKRPDIKK 296
Query: 351 VVESLK 356
V + L+
Sbjct: 297 VQQLLQ 302
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 158 bits (399), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 112/306 (36%), Positives = 160/306 (52%), Gaps = 29/306 (9%)
Query: 62 FDMQELREATNGFNRM------LKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKL----N 111
F EL+ TN F+ K+GEGGFG VYKG + VAVKKL +
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNT-------TVAVKKLAAMVD 67
Query: 112 NHGLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFS 171
+ +Q+ E++ + H NLV+LLG+ S D+ LVY YMPN SL DRL
Sbjct: 68 ITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDL----CLVYVYMPNGSLLDRLSC 123
Query: 172 -RAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLA 230
P L W R +I GAA G+ +LHE I+RD K++N+LLD F K+SDFGLA
Sbjct: 124 LDGTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLA 180
Query: 231 REGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRP 290
R T + +VGT Y APE + G + +SDI+SFGVVL EI+TG ++ +R
Sbjct: 181 RASEKFAQTVMXXRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEHRE 239
Query: 291 TMEQKLLEWVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQ 350
Q LL+ ++ + K ID ++ + S + + +A CL + +RP + +
Sbjct: 240 P--QLLLDIKEEIEDEEKTIEDYIDKKMNDADS-TSVEAMYSVASQCLHEKKNKRPDIKK 296
Query: 351 VVESLK 356
V + L+
Sbjct: 297 VQQLLQ 302
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 155 bits (393), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 111/306 (36%), Positives = 159/306 (51%), Gaps = 29/306 (9%)
Query: 62 FDMQELREATNGFNRM------LKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKL----N 111
F EL+ TN F+ K+GEGGFG VYKG + VAVKKL +
Sbjct: 9 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNT-------TVAVKKLAAMVD 61
Query: 112 NHGLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFS 171
+ +Q+ E++ + H NLV+LLG+ S D+ LVY YMPN SL DRL
Sbjct: 62 ITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDL----CLVYVYMPNGSLLDRLSC 117
Query: 172 -RAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLA 230
P L W R +I GAA G+ +LHE I+RD K++N+LLD F K+SDFGLA
Sbjct: 118 LDGTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLA 174
Query: 231 REGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRP 290
R + +VGT Y APE + G + +SDI+SFGVVL EI+TG ++ +R
Sbjct: 175 RASEKFAQXVMXXRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEHRE 233
Query: 291 TMEQKLLEWVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQ 350
Q LL+ ++ + K ID ++ + S + + +A CL + +RP + +
Sbjct: 234 P--QLLLDIKEEIEDEEKTIEDYIDKKMNDADS-TSVEAMYSVASQCLHEKKNKRPDIKK 290
Query: 351 VVESLK 356
V + L+
Sbjct: 291 VQQLLQ 296
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 149 bits (375), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 110/306 (35%), Positives = 153/306 (50%), Gaps = 29/306 (9%)
Query: 62 FDMQELREATNGFNRM------LKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKL----N 111
F EL+ TN F+ K GEGGFG VYKG + VAVKKL +
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNT-------TVAVKKLAAMVD 58
Query: 112 NHGLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFS 171
+ +Q+ E++ H NLV+LLG+ S D+ LVY Y PN SL DRL
Sbjct: 59 ITTEELKQQFDQEIKVXAKCQHENLVELLGFSSDGDDL----CLVYVYXPNGSLLDRLSC 114
Query: 172 -RAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLA 230
P L W R +I GAA G+ +LHE I+RD K++N+LLD F K+SDFGLA
Sbjct: 115 LDGTPPLSWHXRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLA 171
Query: 231 REGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRP 290
R + +VGT Y APE + G + +SDI+SFGVVL EI+TG ++ +R
Sbjct: 172 RASEKFAQXVXXSRIVGTTAYXAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEHRE 230
Query: 291 TMEQKLLEWVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQ 350
Q LL+ ++ + K ID + N + +A CL + +RP + +
Sbjct: 231 P--QLLLDIKEEIEDEEKTIEDYIDKK-XNDADSTSVEAXYSVASQCLHEKKNKRPDIKK 287
Query: 351 VVESLK 356
V + L+
Sbjct: 288 VQQLLQ 293
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 134/278 (48%), Gaps = 34/278 (12%)
Query: 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVK 138
+IG G FG V+ G D VA+K + G + ++ E + + +SHP LV+
Sbjct: 12 EIGSGQFGLVHLGYWLNKDK------VAIKTIRE-GAMSEEDFIEEAEVMMKLSHPKLVQ 64
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTL-PWKTRLEIILGAAEGLAYLH 197
L G C + LV+E+M + L D L R Q L +T L + L EG+AYL
Sbjct: 65 LYGVCLEQ----APICLVFEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLE 118
Query: 198 EGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYI 257
E VI+RD N L+ N K+SDFG+ R +T ST +A+PE
Sbjct: 119 EAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTS-STGTKFPVKWASPEVF 174
Query: 258 ETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKFSMMIDPR 317
S+SD+WSFGV+++E+ + ++ NR E V + + G + + PR
Sbjct: 175 SFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE------VVEDISTGFR---LYKPR 225
Query: 318 LRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESL 355
L A+ V ++ ++C K+ PE+RP ++++ L
Sbjct: 226 L-------ASTHVYQIMNHCWKERPEDRPAFSRLLRQL 256
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 134/278 (48%), Gaps = 34/278 (12%)
Query: 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVK 138
+IG G FG V+ G D VA+K + G + ++ E + + +SHP LV+
Sbjct: 14 EIGSGQFGLVHLGYWLNKDK------VAIKTIRE-GAMSEEDFIEEAEVMMKLSHPKLVQ 66
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTL-PWKTRLEIILGAAEGLAYLH 197
L G C + LV+E+M + L D L R Q L +T L + L EG+AYL
Sbjct: 67 LYGVCLEQ----APICLVFEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLE 120
Query: 198 EGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYI 257
E VI+RD N L+ N K+SDFG+ R +T ST +A+PE
Sbjct: 121 EAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTS-STGTKFPVKWASPEVF 176
Query: 258 ETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKFSMMIDPR 317
S+SD+WSFGV+++E+ + ++ NR E V + + G + + PR
Sbjct: 177 SFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE------VVEDISTGFR---LYKPR 227
Query: 318 LRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESL 355
L A+ V ++ ++C K+ PE+RP ++++ L
Sbjct: 228 L-------ASTHVYQIMNHCWKERPEDRPAFSRLLRQL 258
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 134/278 (48%), Gaps = 34/278 (12%)
Query: 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVK 138
+IG G FG V+ G D VA+K + G + ++ E + + +SHP LV+
Sbjct: 14 EIGSGQFGLVHLGYWLNKDK------VAIKTIRE-GAMSEEDFIEEAEVMMKLSHPKLVQ 66
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTL-PWKTRLEIILGAAEGLAYLH 197
L G C + LV+E+M + L D L R Q L +T L + L EG+AYL
Sbjct: 67 LYGVCLEQ----APICLVFEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLE 120
Query: 198 EGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYI 257
E VI+RD N L+ N K+SDFG+ R +T ST +A+PE
Sbjct: 121 EA---SVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTS-STGTKFPVKWASPEVF 176
Query: 258 ETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKFSMMIDPR 317
S+SD+WSFGV+++E+ + ++ NR E V + + G + + PR
Sbjct: 177 SFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE------VVEDISTGFR---LYKPR 227
Query: 318 LRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESL 355
L A+ V ++ ++C K+ PE+RP ++++ L
Sbjct: 228 L-------ASTHVYQIMNHCWKERPEDRPAFSRLLRQL 258
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 133/278 (47%), Gaps = 34/278 (12%)
Query: 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVK 138
+IG G FG V+ G D VA+K + G ++ E + + +SHP LV+
Sbjct: 34 EIGSGQFGLVHLGYWLNKDK------VAIKTIKE-GSMSEDDFIEEAEVMMKLSHPKLVQ 86
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTL-PWKTRLEIILGAAEGLAYLH 197
L G C + LV+E+M + L D L R Q L +T L + L EG+AYL
Sbjct: 87 LYGVCLEQ----APICLVFEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLE 140
Query: 198 EGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYI 257
E VI+RD N L+ N K+SDFG+ R +T ST +A+PE
Sbjct: 141 EAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTS-STGTKFPVKWASPEVF 196
Query: 258 ETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKFSMMIDPR 317
S+SD+WSFGV+++E+ + ++ NR E V + + G + + PR
Sbjct: 197 SFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE------VVEDISTGFR---LYKPR 247
Query: 318 LRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESL 355
L A+ V ++ ++C K+ PE+RP ++++ L
Sbjct: 248 L-------ASTHVYQIMNHCWKERPEDRPAFSRLLRQL 278
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/278 (30%), Positives = 134/278 (48%), Gaps = 34/278 (12%)
Query: 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVK 138
+IG G FG V+ G D VA+K + G + ++ E + + +SHP LV+
Sbjct: 17 EIGSGQFGLVHLGYWLNKDK------VAIKTIRE-GAMSEEDFIEEAEVMMKLSHPKLVQ 69
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTL-PWKTRLEIILGAAEGLAYLH 197
L G C + LV+E+M + L D L R Q L +T L + L EG+AYL
Sbjct: 70 LYGVCLEQ----APICLVFEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLE 123
Query: 198 EGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYI 257
E VI+RD N L+ N K+SDFG+ R +T ST +A+PE
Sbjct: 124 EAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTS-STGTKFPVKWASPEVF 179
Query: 258 ETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKFSMMIDPR 317
S+SD+WSFGV+++E+ + ++ NR E V + + G + + PR
Sbjct: 180 SFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE------VVEDISTGFR---LYKPR 230
Query: 318 LRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESL 355
L A+ V ++ ++C ++ PE+RP ++++ L
Sbjct: 231 L-------ASTHVYQIMNHCWRERPEDRPAFSRLLRQL 261
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 84/278 (30%), Positives = 133/278 (47%), Gaps = 34/278 (12%)
Query: 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVK 138
+IG G FG V+ G D VA+K + G + ++ E + + +SHP LV+
Sbjct: 15 EIGSGQFGLVHLGYWLNKDK------VAIKTIRE-GAMSEEDFIEEAEVMMKLSHPKLVQ 67
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTL-PWKTRLEIILGAAEGLAYLH 197
L G C + LV E+M + L D L R Q L +T L + L EG+AYL
Sbjct: 68 LYGVCLEQ----APICLVTEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLE 121
Query: 198 EGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYI 257
E VI+RD N L+ N K+SDFG+ R +T ST +A+PE
Sbjct: 122 EAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTS-STGTKFPVKWASPEVF 177
Query: 258 ETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKFSMMIDPR 317
S+SD+WSFGV+++E+ + ++ NR E V + + G + + PR
Sbjct: 178 SFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE------VVEDISTGFR---LYKPR 228
Query: 318 LRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESL 355
L A+ V ++ ++C ++ PE+RP ++++ L
Sbjct: 229 L-------ASTHVYQIMNHCWRERPEDRPAFSRLLRQL 259
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/286 (30%), Positives = 131/286 (45%), Gaps = 15/286 (5%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPL-DGRGEPLVVAVKKLN-NHGLQGHKQWLAEVQFLGVV 131
++ +GEG FG V P DG GE +VAVK L + G Q W E+ L +
Sbjct: 16 LKKIRDLGEGHFGKVSLYCYDPTNDGTGE--MVAVKALKADCGPQHRSGWKQEIDILRTL 73
Query: 132 SHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAE 191
H +++K G C + E+ +Q LV EY+P SL D L + ++ L E
Sbjct: 74 YHEHIIKYKGCCEDQGEKSLQ--LVMEYVPLGSLRDYL---PRHSIGLAQLLLFAQQICE 128
Query: 192 GLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTG-DHTHVSTAVVGTYG 250
G+AYLH I+R+ NVLLD + K+ DFGLA+ P G ++ V
Sbjct: 129 GMAYLHSQ---HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVF 185
Query: 251 YAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKF 310
+ APE ++ SD+WSFGV LYE+LT ++ PT +L+ + Q +
Sbjct: 186 WYAPECLKEYKFYYASDVWSFGVTLYELLTHCDS-SQSPPTKFLELIG-IAQGQMTVLRL 243
Query: 311 SMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLK 356
+ +++ R V L NC + RPT ++ LK
Sbjct: 244 TELLERGERLPRPDKCPCEVYHLMKNCWETEASFRPTFENLIPILK 289
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 93/295 (31%), Positives = 131/295 (44%), Gaps = 16/295 (5%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPL-DGRGEPLVVAVKKLN-NHGLQGHKQWLAEVQFLGVV 131
++ +GEG FG V P DG GE +VAVK L + G Q W E+ L +
Sbjct: 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGE--MVAVKALKADAGPQHRSGWKQEIDILRTL 90
Query: 132 SHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAE 191
H +++K G C ED LV EY+P SL D L + ++ L E
Sbjct: 91 YHEHIIKYKGCC--EDAGAASLQLVMEYVPLGSLRDYL---PRHSIGLAQLLLFAQQICE 145
Query: 192 GLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTH-VSTAVVGTYG 250
G+AYLH I+RD NVLLD + K+ DFGLA+ P G + V
Sbjct: 146 GMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVF 202
Query: 251 YAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKF 310
+ APE ++ SD+WSFGV LYE+LT ++ PT +L+ + Q +
Sbjct: 203 WYAPECLKEYKFYYASDVWSFGVTLYELLTHCDS-SQSPPTKFLELIG-IAQGQMTVLRL 260
Query: 311 SMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQESEQG 365
+ +++ R V L NC + RPT ++ LK V E QG
Sbjct: 261 TELLERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILK-TVHEKYQG 314
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/286 (30%), Positives = 131/286 (45%), Gaps = 15/286 (5%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPL-DGRGEPLVVAVKKLN-NHGLQGHKQWLAEVQFLGVV 131
++ +GEG FG V P DG GE +VAVK L + G Q W E+ L +
Sbjct: 16 LKKIRDLGEGHFGKVSLYCYDPTNDGTGE--MVAVKALKADCGPQHRSGWKQEIDILRTL 73
Query: 132 SHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAE 191
H +++K G C + E+ +Q LV EY+P SL D L + ++ L E
Sbjct: 74 YHEHIIKYKGCCEDQGEKSLQ--LVMEYVPLGSLRDYL---PRHSIGLAQLLLFAQQICE 128
Query: 192 GLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTG-DHTHVSTAVVGTYG 250
G+AYLH I+R+ NVLLD + K+ DFGLA+ P G ++ V
Sbjct: 129 GMAYLHAQ---HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVF 185
Query: 251 YAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKF 310
+ APE ++ SD+WSFGV LYE+LT ++ PT +L+ + Q +
Sbjct: 186 WYAPECLKEYKFYYASDVWSFGVTLYELLTHCDS-SQSPPTKFLELIG-IAQGQMTVLRL 243
Query: 311 SMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLK 356
+ +++ R V L NC + RPT ++ LK
Sbjct: 244 TELLERGERLPRPDKCPCEVYHLMKNCWETEASFRPTFENLIPILK 289
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 138/291 (47%), Gaps = 40/291 (13%)
Query: 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG-----LQGHKQWLAEVQFLGVVSH 133
+IG G FG+VYKG G+ VAVK LN LQ K EV L H
Sbjct: 31 RIGSGSFGTVYKGK-----WHGD---VAVKMLNVTAPTPQQLQAFKN---EVGVLRKTRH 79
Query: 134 PNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGL 193
N++ +GY + Q +V ++ SL L + ++ K ++I A G+
Sbjct: 80 VNILLFMGYSTAP-----QLAIVTQWCEGSSLYHHLHA-SETKFEMKKLIDIARQTARGM 133
Query: 194 AYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAA 253
YLH +I+RD K++N+ L + K+ DFGLA E +H + G+ + A
Sbjct: 134 DYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMA 190
Query: 254 PEYI---ETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKF 310
PE I ++ QSD+++FG+VLYE++TG+ L + +++E V +
Sbjct: 191 PEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ--LPYSNINNRDQIIEMVGRGS------ 242
Query: 311 SMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQE 361
+ P L S N +R+ +L CLKK +ERP+ +++ ++ +E
Sbjct: 243 ---LSPDLSKVRS-NCPKRMKRLMAECLKKKRDERPSFPRILAEIEELARE 289
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 75/210 (35%), Positives = 102/210 (48%), Gaps = 13/210 (6%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPL-DGRGEPLVVAVKKL-NNHGLQGHKQWLAEVQFLGVV 131
++ +GEG FG V P DG GE +VAVK L G Q W E++ L +
Sbjct: 11 LKKIRDLGEGHFGKVSLYCYDPTNDGTGE--MVAVKALKEGCGPQLRSGWQREIEILRTL 68
Query: 132 SHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAE 191
H ++VK G C + E+ +Q LV EY+P SL D L + + L E
Sbjct: 69 YHEHIVKYKGCCEDQGEKSVQ--LVMEYVPLGSLRDYL---PRHCVGLAQLLLFAQQICE 123
Query: 192 GLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTG-DHTHVSTAVVGTYG 250
G+AYLH I+R NVLLD + K+ DFGLA+ P G ++ V
Sbjct: 124 GMAYLHAQ---HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVF 180
Query: 251 YAAPEYIETGHLKSQSDIWSFGVVLYEILT 280
+ APE ++ SD+WSFGV LYE+LT
Sbjct: 181 WYAPECLKECKFYYASDVWSFGVTLYELLT 210
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 75/210 (35%), Positives = 102/210 (48%), Gaps = 13/210 (6%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPL-DGRGEPLVVAVKKL-NNHGLQGHKQWLAEVQFLGVV 131
++ +GEG FG V P DG GE +VAVK L G Q W E++ L +
Sbjct: 10 LKKIRDLGEGHFGKVSLYCYDPTNDGTGE--MVAVKALKEGCGPQLRSGWQREIEILRTL 67
Query: 132 SHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAE 191
H ++VK G C + E+ +Q LV EY+P SL D L + + L E
Sbjct: 68 YHEHIVKYKGCCEDQGEKSVQ--LVMEYVPLGSLRDYL---PRHCVGLAQLLLFAQQICE 122
Query: 192 GLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTG-DHTHVSTAVVGTYG 250
G+AYLH I+R NVLLD + K+ DFGLA+ P G ++ V
Sbjct: 123 GMAYLHAQ---HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVF 179
Query: 251 YAAPEYIETGHLKSQSDIWSFGVVLYEILT 280
+ APE ++ SD+WSFGV LYE+LT
Sbjct: 180 WYAPECLKECKFYYASDVWSFGVTLYELLT 209
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 138/291 (47%), Gaps = 40/291 (13%)
Query: 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG-----LQGHKQWLAEVQFLGVVSH 133
+IG G FG+VYKG G+ VAVK LN LQ K EV L H
Sbjct: 31 RIGSGSFGTVYKGKWH-----GD---VAVKMLNVTAPTPQQLQAFKN---EVGVLRKTRH 79
Query: 134 PNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGL 193
N++ +GY + Q +V ++ SL L + ++ K ++I A G+
Sbjct: 80 VNILLFMGYSTKP-----QLAIVTQWCEGSSLYHHLHA-SETKFEMKKLIDIARQTARGM 133
Query: 194 AYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAA 253
YLH +I+RD K++N+ L + K+ DFGLA E +H + G+ + A
Sbjct: 134 DYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMA 190
Query: 254 PEYI---ETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKF 310
PE I ++ QSD+++FG+VLYE++TG+ L + +++E V +
Sbjct: 191 PEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ--LPYSNINNRDQIIEMVGRGS------ 242
Query: 311 SMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQE 361
+ P L S N +R+ +L CLKK +ERP+ +++ ++ +E
Sbjct: 243 ---LSPDLSKVRS-NCPKRMKRLMAECLKKKRDERPSFPRILAEIEELARE 289
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 132/282 (46%), Gaps = 45/282 (15%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKL 139
+G G FG V K R D VA+K++ + + K ++ E++ L V+HPN+VKL
Sbjct: 17 VGRGAFGVVCKAKWRAKD-------VAIKQIESESER--KAFIVELRQLSRVNHPNIVKL 67
Query: 140 LGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTR---LEIILGAAEGLAYL 196
G C LV EY SL + L A+P LP+ T + L ++G+AYL
Sbjct: 68 YGACLNP------VCLVMEYAEGGSLYNVLHG-AEP-LPYYTAAHAMSWCLQCSQGVAYL 119
Query: 197 HEGLEIQVIYRDFKTSNVLL-DGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPE 255
H +I+RD K N+LL G K+ DFG A + TH+ T G+ + APE
Sbjct: 120 HSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACD----IQTHM-TNNKGSAAWMAPE 174
Query: 256 YIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKFSMM-- 313
E + + D++S+G++L+E++T R+ + G F +M
Sbjct: 175 VFEGSNYSEKCDVFSWGIILWEVITRRKPFDE-----------------IGGPAFRIMWA 217
Query: 314 IDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESL 355
+ R N + + L C K+P +RP+M ++V+ +
Sbjct: 218 VHNGTRPPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIM 259
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 132/282 (46%), Gaps = 45/282 (15%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKL 139
+G G FG V K R D VA+K++ + + K ++ E++ L V+HPN+VKL
Sbjct: 16 VGRGAFGVVCKAKWRAKD-------VAIKQIESESER--KAFIVELRQLSRVNHPNIVKL 66
Query: 140 LGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTR---LEIILGAAEGLAYL 196
G C LV EY SL + L A+P LP+ T + L ++G+AYL
Sbjct: 67 YGACLN------PVCLVMEYAEGGSLYNVLHG-AEP-LPYYTAAHAMSWCLQCSQGVAYL 118
Query: 197 HEGLEIQVIYRDFKTSNVLL-DGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPE 255
H +I+RD K N+LL G K+ DFG A + TH+ T G+ + APE
Sbjct: 119 HSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACD----IQTHM-TNNKGSAAWMAPE 173
Query: 256 YIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKFSMM-- 313
E + + D++S+G++L+E++T R+ + G F +M
Sbjct: 174 VFEGSNYSEKCDVFSWGIILWEVITRRKPFDE-----------------IGGPAFRIMWA 216
Query: 314 IDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESL 355
+ R N + + L C K+P +RP+M ++V+ +
Sbjct: 217 VHNGTRPPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIM 258
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/221 (33%), Positives = 109/221 (49%), Gaps = 14/221 (6%)
Query: 66 ELREATNGFNRMLK----IGEGGFGSVYKGTIRPL-DGRGEPLVVAVKKLNNHGLQGHKQ 120
E R+ T R LK +G+G FGSV PL D GE VVAVKKL + + +
Sbjct: 3 EDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGE--VVAVKKLQHSTEEHLRD 60
Query: 121 WLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWK 180
+ E++ L + H N+VK G C + R ++ L+ EY+P SL D L + A+ K
Sbjct: 61 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLK--LIMEYLPYGSLRDYLQAHAERIDHIK 118
Query: 181 TRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTG-DHT 239
L+ +G+ YL + I+RD T N+L++ + K+ DFGL + P +
Sbjct: 119 L-LQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXX 174
Query: 240 HVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILT 280
V + APE + SD+WSFGVVLYE+ T
Sbjct: 175 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/211 (34%), Positives = 109/211 (51%), Gaps = 16/211 (7%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGH-KQWLAEVQFLGVVS 132
FN + IG G FG VY GT+ LD G+ + AVK LN G Q+L E + S
Sbjct: 34 FNEV--IGRGHFGCVYHGTL--LDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS 89
Query: 133 HPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQ-PTLPWKTRLEIILGAAE 191
HPN++ LLG C + L+V YM + L + + + PT+ K + L A+
Sbjct: 90 HPNVLSLLGICLRSEG---SPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAK 144
Query: 192 GLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDH--THVSTAVVGTY 249
G+ YL + ++RD N +LD F K++DFGLAR+ ++ H T
Sbjct: 145 GMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV 201
Query: 250 GYAAPEYIETGHLKSQSDIWSFGVVLYEILT 280
+ A E ++T ++SD+WSFGV+L+E++T
Sbjct: 202 KWMALESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/211 (34%), Positives = 109/211 (51%), Gaps = 16/211 (7%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGH-KQWLAEVQFLGVVS 132
FN + IG G FG VY GT+ LD G+ + AVK LN G Q+L E + S
Sbjct: 31 FNEV--IGRGHFGCVYHGTL--LDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS 86
Query: 133 HPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQ-PTLPWKTRLEIILGAAE 191
HPN++ LLG C + L+V YM + L + + + PT+ K + L A+
Sbjct: 87 HPNVLSLLGICLRSEG---SPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAK 141
Query: 192 GLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDH--THVSTAVVGTY 249
G+ YL + ++RD N +LD F K++DFGLAR+ ++ H T
Sbjct: 142 GMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV 198
Query: 250 GYAAPEYIETGHLKSQSDIWSFGVVLYEILT 280
+ A E ++T ++SD+WSFGV+L+E++T
Sbjct: 199 KWMALESLQTQKFTTKSDVWSFGVLLWELMT 229
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/211 (34%), Positives = 108/211 (51%), Gaps = 16/211 (7%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGH-KQWLAEVQFLGVVS 132
FN + IG G FG VY GT+ LD G+ + AVK LN G Q+L E + S
Sbjct: 32 FNEV--IGRGHFGCVYHGTL--LDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS 87
Query: 133 HPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQ-PTLPWKTRLEIILGAAE 191
HPN++ LLG C + L+V YM + L + + + PT+ K + L A+
Sbjct: 88 HPNVLSLLGICLRSEG---SPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAK 142
Query: 192 GLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLARE--GPTGDHTHVSTAVVGTY 249
G+ +L + ++RD N +LD F K++DFGLAR+ D H T
Sbjct: 143 GMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPV 199
Query: 250 GYAAPEYIETGHLKSQSDIWSFGVVLYEILT 280
+ A E ++T ++SD+WSFGV+L+E++T
Sbjct: 200 KWMALESLQTQKFTTKSDVWSFGVLLWELMT 230
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/211 (34%), Positives = 108/211 (51%), Gaps = 16/211 (7%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGH-KQWLAEVQFLGVVS 132
FN + IG G FG VY GT+ LD G+ + AVK LN G Q+L E + S
Sbjct: 34 FNEV--IGRGHFGCVYHGTL--LDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS 89
Query: 133 HPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQ-PTLPWKTRLEIILGAAE 191
HPN++ LLG C + L+V YM + L + + + PT+ K + L A+
Sbjct: 90 HPNVLSLLGICLRSEG---SPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAK 144
Query: 192 GLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLARE--GPTGDHTHVSTAVVGTY 249
G+ +L + ++RD N +LD F K++DFGLAR+ D H T
Sbjct: 145 GMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPV 201
Query: 250 GYAAPEYIETGHLKSQSDIWSFGVVLYEILT 280
+ A E ++T ++SD+WSFGV+L+E++T
Sbjct: 202 KWMALESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/211 (34%), Positives = 109/211 (51%), Gaps = 16/211 (7%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGH-KQWLAEVQFLGVVS 132
FN + IG G FG VY GT+ LD G+ + AVK LN G Q+L E + S
Sbjct: 53 FNEV--IGRGHFGCVYHGTL--LDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS 108
Query: 133 HPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQ-PTLPWKTRLEIILGAAE 191
HPN++ LLG C + L+V YM + L + + + PT+ K + L A+
Sbjct: 109 HPNVLSLLGICLRSEG---SPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAK 163
Query: 192 GLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDH--THVSTAVVGTY 249
G+ YL + ++RD N +LD F K++DFGLAR+ ++ H T
Sbjct: 164 GMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV 220
Query: 250 GYAAPEYIETGHLKSQSDIWSFGVVLYEILT 280
+ A E ++T ++SD+WSFGV+L+E++T
Sbjct: 221 KWMALESLQTQKFTTKSDVWSFGVLLWELMT 251
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/211 (34%), Positives = 109/211 (51%), Gaps = 16/211 (7%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGH-KQWLAEVQFLGVVS 132
FN + IG G FG VY GT+ LD G+ + AVK LN G Q+L E + S
Sbjct: 26 FNEV--IGRGHFGCVYHGTL--LDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS 81
Query: 133 HPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQ-PTLPWKTRLEIILGAAE 191
HPN++ LLG C + L+V YM + L + + + PT+ K + L A+
Sbjct: 82 HPNVLSLLGICLRSEG---SPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAK 136
Query: 192 GLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDH--THVSTAVVGTY 249
G+ YL + ++RD N +LD F K++DFGLAR+ ++ H T
Sbjct: 137 GMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV 193
Query: 250 GYAAPEYIETGHLKSQSDIWSFGVVLYEILT 280
+ A E ++T ++SD+WSFGV+L+E++T
Sbjct: 194 KWMALESLQTQKFTTKSDVWSFGVLLWELMT 224
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 133/287 (46%), Gaps = 32/287 (11%)
Query: 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG-LQGHKQWLAEVQFLGVVSHPNLV 137
++G+G FG VY+G R + VAVK +N L+ ++L E + + ++V
Sbjct: 23 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 82
Query: 138 KLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFS-----RAQPTLPWKTRLEIILGAAE- 191
+LLG S +G L+V E M + L+ L S P P T E+I AAE
Sbjct: 83 RLLGVVS----KGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 138
Query: 192 --GLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTY 249
G+AYL+ + ++RD N ++ +F K+ DFG+ R+ D+ +
Sbjct: 139 ADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 195
Query: 250 GYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKK 309
+ APE ++ G + SD+WSFGVVL+EI + L E Q ++ +
Sbjct: 196 RWMAPESLKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLSNEQV 240
Query: 310 FSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLK 356
++D +Q N RV L C + NP+ RPT ++V LK
Sbjct: 241 LKFVMDGGYLDQPD-NCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 286
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/211 (34%), Positives = 108/211 (51%), Gaps = 16/211 (7%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGH-KQWLAEVQFLGVVS 132
FN + IG G FG VY GT+ LD G+ + AVK LN G Q+L E + S
Sbjct: 35 FNEV--IGRGHFGCVYHGTL--LDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS 90
Query: 133 HPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQ-PTLPWKTRLEIILGAAE 191
HPN++ LLG C + L+V YM + L + + + PT+ K + L A+
Sbjct: 91 HPNVLSLLGICLRSEG---SPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAK 145
Query: 192 GLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLARE--GPTGDHTHVSTAVVGTY 249
G+ +L + ++RD N +LD F K++DFGLAR+ D H T
Sbjct: 146 GMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPV 202
Query: 250 GYAAPEYIETGHLKSQSDIWSFGVVLYEILT 280
+ A E ++T ++SD+WSFGV+L+E++T
Sbjct: 203 KWMALESLQTQKFTTKSDVWSFGVLLWELMT 233
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/211 (34%), Positives = 109/211 (51%), Gaps = 16/211 (7%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGH-KQWLAEVQFLGVVS 132
FN + IG G FG VY GT+ LD G+ + AVK LN G Q+L E + S
Sbjct: 52 FNEV--IGRGHFGCVYHGTL--LDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS 107
Query: 133 HPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQ-PTLPWKTRLEIILGAAE 191
HPN++ LLG C + L+V YM + L + + + PT+ K + L A+
Sbjct: 108 HPNVLSLLGICLRSEG---SPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAK 162
Query: 192 GLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDH--THVSTAVVGTY 249
G+ YL + ++RD N +LD F K++DFGLAR+ ++ H T
Sbjct: 163 GMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV 219
Query: 250 GYAAPEYIETGHLKSQSDIWSFGVVLYEILT 280
+ A E ++T ++SD+WSFGV+L+E++T
Sbjct: 220 KWMALESLQTQKFTTKSDVWSFGVLLWELMT 250
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/211 (34%), Positives = 108/211 (51%), Gaps = 16/211 (7%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGH-KQWLAEVQFLGVVS 132
FN + IG G FG VY GT+ LD G+ + AVK LN G Q+L E + S
Sbjct: 35 FNEV--IGRGHFGCVYHGTL--LDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS 90
Query: 133 HPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQ-PTLPWKTRLEIILGAAE 191
HPN++ LLG C + L+V YM + L + + + PT+ K + L A+
Sbjct: 91 HPNVLSLLGICLRSEG---SPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAK 145
Query: 192 GLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLARE--GPTGDHTHVSTAVVGTY 249
G+ +L + ++RD N +LD F K++DFGLAR+ D H T
Sbjct: 146 GMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPV 202
Query: 250 GYAAPEYIETGHLKSQSDIWSFGVVLYEILT 280
+ A E ++T ++SD+WSFGV+L+E++T
Sbjct: 203 KWMALESLQTQKFTTKSDVWSFGVLLWELMT 233
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 132/287 (45%), Gaps = 32/287 (11%)
Query: 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG-LQGHKQWLAEVQFLGVVSHPNLV 137
++G+G FG VY+G R + VAVK +N L+ ++L E + + ++V
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 138 KLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFS-----RAQPTLPWKTRLEIILGAAE- 191
+LLG S +G L+V E M + L+ L S P P T E+I AAE
Sbjct: 84 RLLGVVS----KGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 139
Query: 192 --GLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTY 249
G+AYL+ + ++RD N ++ +F K+ DFG+ R+ D +
Sbjct: 140 ADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPV 196
Query: 250 GYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKK 309
+ APE ++ G + SD+WSFGVVL+EI + L E Q ++ +
Sbjct: 197 RWMAPESLKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLSNEQV 241
Query: 310 FSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLK 356
++D +Q N RV L C + NP+ RPT ++V LK
Sbjct: 242 LKFVMDGGYLDQPD-NCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 287
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 72/211 (34%), Positives = 109/211 (51%), Gaps = 16/211 (7%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGH-KQWLAEVQFLGVVS 132
FN + IG G FG VY GT+ LD G+ + AVK LN G Q+L E + S
Sbjct: 33 FNEV--IGRGHFGCVYHGTL--LDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS 88
Query: 133 HPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQ-PTLPWKTRLEIILGAAE 191
HPN++ LLG C + L+V YM + L + + + PT+ K + L A+
Sbjct: 89 HPNVLSLLGICLRSEG---SPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAK 143
Query: 192 GLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDH--THVSTAVVGTY 249
G+ YL + ++RD N +LD F K++DFGLAR+ ++ H T
Sbjct: 144 GMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV 200
Query: 250 GYAAPEYIETGHLKSQSDIWSFGVVLYEILT 280
+ A E ++T ++SD+WSFGV+L+E++T
Sbjct: 201 KWMALESLQTQKFTTKSDVWSFGVLLWELMT 231
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 132/287 (45%), Gaps = 32/287 (11%)
Query: 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG-LQGHKQWLAEVQFLGVVSHPNLV 137
++G+G FG VY+G R + VAVK +N L+ ++L E + + ++V
Sbjct: 21 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 80
Query: 138 KLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFS-----RAQPTLPWKTRLEIILGAAE- 191
+LLG S +G L+V E M + L+ L S P P T E+I AAE
Sbjct: 81 RLLGVVS----KGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 136
Query: 192 --GLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTY 249
G+AYL+ + ++RD N ++ +F K+ DFG+ R+ D +
Sbjct: 137 ADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPV 193
Query: 250 GYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKK 309
+ APE ++ G + SD+WSFGVVL+EI + L E Q ++ +
Sbjct: 194 RWMAPESLKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLSNEQV 238
Query: 310 FSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLK 356
++D +Q N RV L C + NP+ RPT ++V LK
Sbjct: 239 LKFVMDGGYLDQPD-NCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 284
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 72/211 (34%), Positives = 109/211 (51%), Gaps = 16/211 (7%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGH-KQWLAEVQFLGVVS 132
FN + IG G FG VY GT+ LD G+ + AVK LN G Q+L E + S
Sbjct: 34 FNEV--IGRGHFGCVYHGTL--LDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS 89
Query: 133 HPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQ-PTLPWKTRLEIILGAAE 191
HPN++ LLG C + L+V YM + L + + + PT+ K + L A+
Sbjct: 90 HPNVLSLLGICLRSEG---SPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAK 144
Query: 192 GLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDH--THVSTAVVGTY 249
G+ YL + ++RD N +LD F K++DFGLAR+ ++ H T
Sbjct: 145 GMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV 201
Query: 250 GYAAPEYIETGHLKSQSDIWSFGVVLYEILT 280
+ A E ++T ++SD+WSFGV+L+E++T
Sbjct: 202 KWMALESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 72/211 (34%), Positives = 108/211 (51%), Gaps = 16/211 (7%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGH-KQWLAEVQFLGVVS 132
FN + IG G FG VY GT+ LD G+ + AVK LN G Q+L E + S
Sbjct: 93 FNEV--IGRGHFGCVYHGTL--LDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS 148
Query: 133 HPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQ-PTLPWKTRLEIILGAAE 191
HPN++ LLG C + L+V YM + L + + + PT+ K + L A+
Sbjct: 149 HPNVLSLLGICLRSEG---SPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAK 203
Query: 192 GLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLARE--GPTGDHTHVSTAVVGTY 249
G+ +L + ++RD N +LD F K++DFGLAR+ D H T
Sbjct: 204 GMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPV 260
Query: 250 GYAAPEYIETGHLKSQSDIWSFGVVLYEILT 280
+ A E ++T ++SD+WSFGV+L+E++T
Sbjct: 261 KWMALESLQTQKFTTKSDVWSFGVLLWELMT 291
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 72/211 (34%), Positives = 109/211 (51%), Gaps = 16/211 (7%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGH-KQWLAEVQFLGVVS 132
FN + IG G FG VY GT+ LD G+ + AVK LN G Q+L E + S
Sbjct: 32 FNEV--IGRGHFGCVYHGTL--LDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS 87
Query: 133 HPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQ-PTLPWKTRLEIILGAAE 191
HPN++ LLG C + L+V YM + L + + + PT+ K + L A+
Sbjct: 88 HPNVLSLLGICLRSEG---SPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAK 142
Query: 192 GLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDH--THVSTAVVGTY 249
G+ YL + ++RD N +LD F K++DFGLAR+ ++ H T
Sbjct: 143 GMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV 199
Query: 250 GYAAPEYIETGHLKSQSDIWSFGVVLYEILT 280
+ A E ++T ++SD+WSFGV+L+E++T
Sbjct: 200 KWMALESLQTQKFTTKSDVWSFGVLLWELMT 230
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 72/211 (34%), Positives = 108/211 (51%), Gaps = 16/211 (7%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGH-KQWLAEVQFLGVVS 132
FN + IG G FG VY GT+ LD G+ + AVK LN G Q+L E + S
Sbjct: 39 FNEV--IGRGHFGCVYHGTL--LDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS 94
Query: 133 HPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQ-PTLPWKTRLEIILGAAE 191
HPN++ LLG C + L+V YM + L + + + PT+ K + L A+
Sbjct: 95 HPNVLSLLGICLRSEG---SPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAK 149
Query: 192 GLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLARE--GPTGDHTHVSTAVVGTY 249
G+ +L + ++RD N +LD F K++DFGLAR+ D H T
Sbjct: 150 GMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPV 206
Query: 250 GYAAPEYIETGHLKSQSDIWSFGVVLYEILT 280
+ A E ++T ++SD+WSFGV+L+E++T
Sbjct: 207 KWMALESLQTQKFTTKSDVWSFGVLLWELMT 237
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 72/211 (34%), Positives = 109/211 (51%), Gaps = 16/211 (7%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGH-KQWLAEVQFLGVVS 132
FN + IG G FG VY GT+ LD G+ + AVK LN G Q+L E + S
Sbjct: 29 FNEV--IGRGHFGCVYHGTL--LDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS 84
Query: 133 HPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQ-PTLPWKTRLEIILGAAE 191
HPN++ LLG C + L+V YM + L + + + PT+ K + L A+
Sbjct: 85 HPNVLSLLGICLRSEG---SPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAK 139
Query: 192 GLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDH--THVSTAVVGTY 249
G+ YL + ++RD N +LD F K++DFGLAR+ ++ H T
Sbjct: 140 GMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV 196
Query: 250 GYAAPEYIETGHLKSQSDIWSFGVVLYEILT 280
+ A E ++T ++SD+WSFGV+L+E++T
Sbjct: 197 KWMALESLQTQKFTTKSDVWSFGVLLWELMT 227
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 137/291 (47%), Gaps = 40/291 (13%)
Query: 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG-----LQGHKQWLAEVQFLGVVSH 133
+IG G FG+VYKG G+ VAVK LN LQ K EV L H
Sbjct: 19 RIGSGSFGTVYKGK-----WHGD---VAVKMLNVTAPTPQQLQAFKN---EVGVLRKTRH 67
Query: 134 PNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGL 193
N++ +GY + Q +V ++ SL L + ++ K ++I A G+
Sbjct: 68 VNILLFMGYSTKP-----QLAIVTQWCEGSSLYHHLHA-SETKFEMKKLIDIARQTARGM 121
Query: 194 AYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAA 253
YLH +I+RD K++N+ L + K+ DFGLA +H + G+ + A
Sbjct: 122 DYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMA 178
Query: 254 PEYI---ETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKF 310
PE I ++ QSD+++FG+VLYE++TG+ L + +++E V +
Sbjct: 179 PEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ--LPYSNINNRDQIIEMVGRGS------ 230
Query: 311 SMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQE 361
+ P L S N +R+ +L CLKK +ERP+ +++ ++ +E
Sbjct: 231 ---LSPDLSKVRS-NCPKRMKRLMAECLKKKRDERPSFPRILAEIEELARE 277
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 72/211 (34%), Positives = 108/211 (51%), Gaps = 16/211 (7%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGH-KQWLAEVQFLGVVS 132
FN + IG G FG VY GT+ LD G+ + AVK LN G Q+L E + S
Sbjct: 34 FNEV--IGRGHFGCVYHGTL--LDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS 89
Query: 133 HPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQ-PTLPWKTRLEIILGAAE 191
HPN++ LLG C + L+V YM + L + + + PT+ K + L A+
Sbjct: 90 HPNVLSLLGICLRSEG---SPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAK 144
Query: 192 GLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLARE--GPTGDHTHVSTAVVGTY 249
G+ +L + ++RD N +LD F K++DFGLAR+ D H T
Sbjct: 145 GMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPV 201
Query: 250 GYAAPEYIETGHLKSQSDIWSFGVVLYEILT 280
+ A E ++T ++SD+WSFGV+L+E++T
Sbjct: 202 KWMALESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 133/287 (46%), Gaps = 32/287 (11%)
Query: 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG-LQGHKQWLAEVQFLGVVSHPNLV 137
++G+G FG VY+G R + VAVK +N L+ ++L E + + ++V
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 138 KLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFS-----RAQPTLPWKTRLEIILGAAE- 191
+LLG S +G L+V E M + L+ L S P P T E+I AAE
Sbjct: 84 RLLGVVS----KGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 139
Query: 192 --GLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTY 249
G+AYL+ + ++RD N ++ +F K+ DFG+ R+ D+ +
Sbjct: 140 ADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 196
Query: 250 GYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKK 309
+ APE ++ G + SD+WSFGVVL+EI + L E Q ++ +
Sbjct: 197 RWMAPESLKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLSNEQV 241
Query: 310 FSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLK 356
++D +Q N RV L C + NP+ RPT ++V LK
Sbjct: 242 LKFVMDGGYLDQPD-NCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 287
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 131/287 (45%), Gaps = 32/287 (11%)
Query: 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG-LQGHKQWLAEVQFLGVVSHPNLV 137
++G+G FG VY+G R + VAVK +N L+ ++L E + + ++V
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 138 KLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFS-----RAQPTLPWKTRLEIILGAAE- 191
+LLG S +G L+V E M + L+ L S P P T E+I AAE
Sbjct: 84 RLLGVVS----KGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 139
Query: 192 --GLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTY 249
G+AYL+ + ++RD N ++ +F K+ DFG+ R+ D +
Sbjct: 140 ADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPV 196
Query: 250 GYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKK 309
+ APE ++ G + SD+WSFGVVL+EI + L E Q ++ +
Sbjct: 197 RWMAPESLKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLSNEQV 241
Query: 310 FSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLK 356
++D +Q N RV L C + NP RPT ++V LK
Sbjct: 242 LKFVMDGGYLDQPD-NCPERVTDLMRMCWQFNPNMRPTFLEIVNLLK 287
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 72/220 (32%), Positives = 108/220 (49%), Gaps = 14/220 (6%)
Query: 67 LREATNGFNRMLK----IGEGGFGSVYKGTIRPL-DGRGEPLVVAVKKLNNHGLQGHKQW 121
+R+ T R LK +G+G FGSV PL D GE VVAVKKL + + + +
Sbjct: 1 MRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGE--VVAVKKLQHSTEEHLRDF 58
Query: 122 LAEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKT 181
E++ L + H N+VK G C + R ++ L+ EY+P SL D L + + +
Sbjct: 59 EREIEILKSLQHDNIVKYKGVCYSAGRRNLK--LIMEYLPYGSLRDYL-QKHKERIDHIK 115
Query: 182 RLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTG-DHTH 240
L+ +G+ YL + I+RD T N+L++ + K+ DFGL + P +
Sbjct: 116 LLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK 172
Query: 241 VSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILT 280
V + APE + SD+WSFGVVLYE+ T
Sbjct: 173 VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 72/211 (34%), Positives = 107/211 (50%), Gaps = 16/211 (7%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGH-KQWLAEVQFLGVVS 132
FN + IG G FG VY GT+ LD G+ + AVK LN G Q+L E + S
Sbjct: 33 FNEV--IGRGHFGCVYHGTL--LDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS 88
Query: 133 HPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQ-PTLPWKTRLEIILGAAE 191
HPN++ LLG C + L+V YM + L + + + PT+ K + L A+
Sbjct: 89 HPNVLSLLGICLRSEG---SPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAK 143
Query: 192 GLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLARE--GPTGDHTHVSTAVVGTY 249
G+ YL + ++RD N +LD F K++DFGLAR+ H T
Sbjct: 144 GMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPV 200
Query: 250 GYAAPEYIETGHLKSQSDIWSFGVVLYEILT 280
+ A E ++T ++SD+WSFGV+L+E++T
Sbjct: 201 KWMALESLQTQKFTTKSDVWSFGVLLWELMT 231
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 107/206 (51%), Gaps = 8/206 (3%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKL 139
+GEG FGSV +G ++ DG + V KL+N + +++L+E + SHPN+++L
Sbjct: 42 LGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRL 101
Query: 140 LGYCSTEDERGIQR-LLVYEYMPNRSLEDR-LFSRAQPT---LPWKTRLEIILGAAEGLA 194
LG C +GI + +++ +M L L+SR + +P +T L+ ++ A G+
Sbjct: 102 LGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGME 161
Query: 195 YLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAP 254
YL ++RD N +L + ++DFGL+++ +GD+ + A
Sbjct: 162 YLSNR---NFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAI 218
Query: 255 EYIETGHLKSQSDIWSFGVVLYEILT 280
E + S+SD+W+FGV ++EI T
Sbjct: 219 ESLADRVYTSKSDVWAFGVTMWEIAT 244
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 85/287 (29%), Positives = 134/287 (46%), Gaps = 40/287 (13%)
Query: 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG-----LQGHKQWLAEVQFLGVVSH 133
+IG G FG+VYKG G+ VAVK LN LQ K EV L H
Sbjct: 35 RIGSGSFGTVYKGK-----WHGD---VAVKMLNVTAPTPQQLQAFKN---EVGVLRKTRH 83
Query: 134 PNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGL 193
N++ +GY + Q +V ++ SL L + ++I A+G+
Sbjct: 84 VNILLFMGYSTKP-----QLAIVTQWCEGSSLYHHLHI-IETKFEMIKLIDIARQTAQGM 137
Query: 194 AYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAA 253
YLH +I+RD K++N+ L + K+ DFGLA E +H + G+ + A
Sbjct: 138 DYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMA 194
Query: 254 PEYI---ETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKF 310
PE I + QSD+++FG+VLYE++TG+ L + +++ V G+ +
Sbjct: 195 PEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ--LPYSNINNRDQIIFMV------GRGY 246
Query: 311 SMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKL 357
+ P L S N + + +L CLKK +ERP Q++ S++L
Sbjct: 247 ---LSPDLSKVRS-NCPKAMKRLMAECLKKKRDERPLFPQILASIEL 289
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 139/284 (48%), Gaps = 38/284 (13%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKL-NNHGLQGHKQWLAEVQFLGVVSHPNLVK 138
IG G FG V G ++ L G+ E + VA+K L + + + + +L+E +G HPN++
Sbjct: 41 IGAGEFGEVCSGHLK-LPGKRE-IFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIH 98
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHE 198
L G + + +++ E+M N SL D + + ++ G A G+ YL +
Sbjct: 99 LEGVVT----KSTPVMIITEFMENGSL-DSFLRQNDGQFTVIQLVGMLRGIAAGMKYLAD 153
Query: 199 GLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAR--EGPTGDHTHVSTAVVGTYG--YAAP 254
+ ++RD N+L++ N K+SDFGL+R E T D T+ S A+ G + AP
Sbjct: 154 ---MNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTS-ALGGKIPIRWTAP 209
Query: 255 EYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTME---QKLLEWVKQFPADGKKFS 311
E I+ S SD+WS+G+V++E+++ RP + Q ++ ++Q
Sbjct: 210 EAIQYRKFTSASDVWSYGIVMWEVMS-----YGERPYWDMTNQDVINAIEQ--------- 255
Query: 312 MMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESL 355
D RL +A + +L +C +K+ RP Q+V +L
Sbjct: 256 ---DYRLPPPMDCPSA--LHQLMLDCWQKDRNHRPKFGQIVNTL 294
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 73/221 (33%), Positives = 108/221 (48%), Gaps = 14/221 (6%)
Query: 66 ELREATNGFNRMLK----IGEGGFGSVYKGTIRPL-DGRGEPLVVAVKKLNNHGLQGHKQ 120
E R+ T R LK +G+G FGSV PL D GE VVAVKKL + + +
Sbjct: 4 EDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGE--VVAVKKLQHSTEEHLRD 61
Query: 121 WLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWK 180
+ E++ L + H N+VK G C + R ++ L+ EY+P SL D L + + +
Sbjct: 62 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLK--LIMEYLPYGSLRDYL-QKHKERIDHI 118
Query: 181 TRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTG-DHT 239
L+ +G+ YL + I+RD T N+L++ + K+ DFGL + P +
Sbjct: 119 KLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXX 175
Query: 240 HVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILT 280
V + APE + SD+WSFGVVLYE+ T
Sbjct: 176 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 216
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 85/287 (29%), Positives = 134/287 (46%), Gaps = 40/287 (13%)
Query: 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG-----LQGHKQWLAEVQFLGVVSH 133
+IG G FG+VYKG G+ VAVK LN LQ K EV L H
Sbjct: 43 RIGSGSFGTVYKGK-----WHGD---VAVKMLNVTAPTPQQLQAFKN---EVGVLRKTRH 91
Query: 134 PNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGL 193
N++ +GY + Q +V ++ SL L + ++I A+G+
Sbjct: 92 VNILLFMGYSTKP-----QLAIVTQWCEGSSLYHHLHI-IETKFEMIKLIDIARQTAQGM 145
Query: 194 AYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAA 253
YLH +I+RD K++N+ L + K+ DFGLA E +H + G+ + A
Sbjct: 146 DYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMA 202
Query: 254 PEYI---ETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKF 310
PE I + QSD+++FG+VLYE++TG+ L + +++ V G+ +
Sbjct: 203 PEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ--LPYSNINNRDQIIFMV------GRGY 254
Query: 311 SMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKL 357
+ P L S N + + +L CLKK +ERP Q++ S++L
Sbjct: 255 ---LSPDLSKVRS-NCPKAMKRLMAECLKKKRDERPLFPQILASIEL 297
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/219 (32%), Positives = 107/219 (48%), Gaps = 14/219 (6%)
Query: 68 REATNGFNRMLK----IGEGGFGSVYKGTIRPL-DGRGEPLVVAVKKLNNHGLQGHKQWL 122
R+ T R LK +G+G FGSV PL D GE VVAVKKL + + + +
Sbjct: 1 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGE--VVAVKKLQHSTEEHLRDFE 58
Query: 123 AEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTR 182
E++ L + H N+VK G C + R ++ L+ EY+P SL D L + + +
Sbjct: 59 REIEILKSLQHDNIVKYKGVCYSAGRRNLK--LIMEYLPYGSLRDYL-QKHKERIDHIKL 115
Query: 183 LEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTG-DHTHV 241
L+ +G+ YL + I+RD T N+L++ + K+ DFGL + P + V
Sbjct: 116 LQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV 172
Query: 242 STAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILT 280
+ APE + SD+WSFGVVLYE+ T
Sbjct: 173 KEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 211
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/287 (29%), Positives = 134/287 (46%), Gaps = 40/287 (13%)
Query: 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG-----LQGHKQWLAEVQFLGVVSH 133
+IG G FG+VYKG G+ VAVK LN LQ K EV L H
Sbjct: 15 RIGSGSFGTVYKG-----KWHGD---VAVKMLNVTAPTPQQLQAFKN---EVGVLRKTRH 63
Query: 134 PNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGL 193
N++ +GY + Q +V ++ SL L + ++I A+G+
Sbjct: 64 VNILLFMGYSTKP-----QLAIVTQWCEGSSLYHHLHI-IETKFEMIKLIDIARQTAQGM 117
Query: 194 AYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAA 253
YLH +I+RD K++N+ L + K+ DFGLA E +H + G+ + A
Sbjct: 118 DYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMA 174
Query: 254 PEYI---ETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKF 310
PE I + QSD+++FG+VLYE++TG+ L + +++ V G+ +
Sbjct: 175 PEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ--LPYSNINNRDQIIFMV------GRGY 226
Query: 311 SMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKL 357
+ P L S N + + +L CLKK +ERP Q++ S++L
Sbjct: 227 ---LSPDLSKVRS-NCPKAMKRLMAECLKKKRDERPLFPQILASIEL 269
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/221 (33%), Positives = 108/221 (48%), Gaps = 14/221 (6%)
Query: 66 ELREATNGFNRMLK----IGEGGFGSVYKGTIRPL-DGRGEPLVVAVKKLNNHGLQGHKQ 120
E R+ T R LK +G+G FGSV PL D GE VVAVKKL + + +
Sbjct: 3 EDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGE--VVAVKKLQHSTEEHLRD 60
Query: 121 WLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWK 180
+ E++ L + H N+VK G C + R ++ L+ EY+P SL D L + + +
Sbjct: 61 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLK--LIMEYLPYGSLRDYL-QKHKERIDHI 117
Query: 181 TRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTG-DHT 239
L+ +G+ YL + I+RD T N+L++ + K+ DFGL + P +
Sbjct: 118 KLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXX 174
Query: 240 HVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILT 280
V + APE + SD+WSFGVVLYE+ T
Sbjct: 175 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 148/329 (44%), Gaps = 39/329 (11%)
Query: 42 LPSPR--SIPELYKEKEHHLRVFDMQELREATNGFNRMLKIGEGGFGSVYKGTIRPLDGR 99
LP P+ + P Y+E R F +E+ + ++ IG G G V G +R R
Sbjct: 20 LPEPQFYAEPHTYEEPGRAGRSF-TREIEASRIHIEKI--IGSGDSGEVCYGRLRVPGQR 76
Query: 100 GEPLVVAVKKLN-NHGLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYE 158
P VA+K L + + + +L+E +G HPN+++L G + RG ++V E
Sbjct: 77 DVP--VAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVT----RGRLAMIVTE 130
Query: 159 YMPNRSLEDRLFSR-AQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLD 217
YM N SL+ L + Q T+ + ++ G G+ YL + + ++RD NVL+D
Sbjct: 131 YMENGSLDTFLRTHDGQFTI--MQLVGMLRGVGAGMRYLSD---LGYVHRDLAARNVLVD 185
Query: 218 GNFKPKLSDFGLAR---EGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVV 274
N K+SDFGL+R + P D + +T + APE I S SD+WSFGVV
Sbjct: 186 SNLVCKVSDFGLSRVLEDDP--DAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVV 243
Query: 275 LYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLA 334
++E+L RP + + ++ R + + +L
Sbjct: 244 MWEVLA-----YGERPYWNMTNRDVISS-----------VEEGYRLPAPMGCPHALHQLM 287
Query: 335 DNCLKKNPEERPTMNQVVESLKLAVQESE 363
+C K+ +RP +Q+V L ++ E
Sbjct: 288 LDCWHKDRAQRPRFSQIVSVLDALIRSPE 316
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/221 (33%), Positives = 108/221 (48%), Gaps = 14/221 (6%)
Query: 66 ELREATNGFNRMLK----IGEGGFGSVYKGTIRPL-DGRGEPLVVAVKKLNNHGLQGHKQ 120
E R+ T R LK +G+G FGSV PL D GE VVAVKKL + + +
Sbjct: 7 EDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGE--VVAVKKLQHSTEEHLRD 64
Query: 121 WLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWK 180
+ E++ L + H N+VK G C + R ++ L+ EY+P SL D L + + +
Sbjct: 65 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLK--LIMEYLPYGSLRDYL-QKHKERIDHI 121
Query: 181 TRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTG-DHT 239
L+ +G+ YL + I+RD T N+L++ + K+ DFGL + P +
Sbjct: 122 KLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXX 178
Query: 240 HVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILT 280
V + APE + SD+WSFGVVLYE+ T
Sbjct: 179 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 219
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/221 (33%), Positives = 108/221 (48%), Gaps = 14/221 (6%)
Query: 66 ELREATNGFNRMLK----IGEGGFGSVYKGTIRPL-DGRGEPLVVAVKKLNNHGLQGHKQ 120
E R+ T R LK +G+G FGSV PL D GE VVAVKKL + + +
Sbjct: 5 EDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGE--VVAVKKLQHSTEEHLRD 62
Query: 121 WLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWK 180
+ E++ L + H N+VK G C + R ++ L+ EY+P SL D L + + +
Sbjct: 63 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLK--LIMEYLPYGSLRDYL-QKHKERIDHI 119
Query: 181 TRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTG-DHT 239
L+ +G+ YL + I+RD T N+L++ + K+ DFGL + P +
Sbjct: 120 KLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXX 176
Query: 240 HVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILT 280
V + APE + SD+WSFGVVLYE+ T
Sbjct: 177 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 217
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 102/204 (50%), Gaps = 10/204 (4%)
Query: 79 KIGEGGFGSVYKGTIRPL-DGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLV 137
++G+G FGSV PL D GE VVAVKKL + + + + E++ L + H N+V
Sbjct: 15 QLGKGNFGSVEMCRYDPLQDNTGE--VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIV 72
Query: 138 KLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLH 197
K G C + R ++ L+ EY+P SL D L + + + L+ +G+ YL
Sbjct: 73 KYKGVCYSAGRRNLK--LIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYLG 129
Query: 198 EGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTG-DHTHVSTAVVGTYGYAAPEY 256
+ I+RD T N+L++ + K+ DFGL + P + V + APE
Sbjct: 130 TK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 186
Query: 257 IETGHLKSQSDIWSFGVVLYEILT 280
+ SD+WSFGVVLYE+ T
Sbjct: 187 LTESKFSVASDVWSFGVVLYELFT 210
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/221 (33%), Positives = 108/221 (48%), Gaps = 14/221 (6%)
Query: 66 ELREATNGFNRMLK----IGEGGFGSVYKGTIRPL-DGRGEPLVVAVKKLNNHGLQGHKQ 120
E R+ T R LK +G+G FGSV PL D GE VVAVKKL + + +
Sbjct: 6 EDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGE--VVAVKKLQHSTEEHLRD 63
Query: 121 WLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWK 180
+ E++ L + H N+VK G C + R ++ L+ EY+P SL D L + + +
Sbjct: 64 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLK--LIMEYLPYGSLRDYL-QKHKERIDHI 120
Query: 181 TRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTG-DHT 239
L+ +G+ YL + I+RD T N+L++ + K+ DFGL + P +
Sbjct: 121 KLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXX 177
Query: 240 HVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILT 280
V + APE + SD+WSFGVVLYE+ T
Sbjct: 178 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 218
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/221 (33%), Positives = 108/221 (48%), Gaps = 14/221 (6%)
Query: 66 ELREATNGFNRMLK----IGEGGFGSVYKGTIRPL-DGRGEPLVVAVKKLNNHGLQGHKQ 120
E R+ T R LK +G+G FGSV PL D GE VVAVKKL + + +
Sbjct: 31 EDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGE--VVAVKKLQHSTEEHLRD 88
Query: 121 WLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWK 180
+ E++ L + H N+VK G C + R ++ L+ EY+P SL D L + + +
Sbjct: 89 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLK--LIMEYLPYGSLRDYL-QKHKERIDHI 145
Query: 181 TRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTG-DHT 239
L+ +G+ YL + I+RD T N+L++ + K+ DFGL + P +
Sbjct: 146 KLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXX 202
Query: 240 HVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILT 280
V + APE + SD+WSFGVVLYE+ T
Sbjct: 203 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 243
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 102/204 (50%), Gaps = 10/204 (4%)
Query: 79 KIGEGGFGSVYKGTIRPL-DGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLV 137
++G+G FGSV PL D GE VVAVKKL + + + + E++ L + H N+V
Sbjct: 17 QLGKGNFGSVEMCRYDPLQDNTGE--VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIV 74
Query: 138 KLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLH 197
K G C + R ++ L+ EY+P SL D L + + + L+ +G+ YL
Sbjct: 75 KYKGVCYSAGRRNLK--LIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYLG 131
Query: 198 EGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTG-DHTHVSTAVVGTYGYAAPEY 256
+ I+RD T N+L++ + K+ DFGL + P + V + APE
Sbjct: 132 TK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 188
Query: 257 IETGHLKSQSDIWSFGVVLYEILT 280
+ SD+WSFGVVLYE+ T
Sbjct: 189 LTESKFSVASDVWSFGVVLYELFT 212
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 123/281 (43%), Gaps = 44/281 (15%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKL 139
IG+G FG V G D RG VAVK + N + +LAE + + H NLV+L
Sbjct: 201 IGKGEFGDVMLG-----DYRGNK--VAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQL 251
Query: 140 LGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEG 199
LG E++ G+ +V EYM SL D L SR + L L+ L E + YL
Sbjct: 252 LGVI-VEEKGGL--YIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN 308
Query: 200 LEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIET 259
++RD NVL+ + K+SDFGL +E + T + APE +
Sbjct: 309 ---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPV-----KWTAPEALRE 360
Query: 260 GHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKFSMMIDPRLR 319
++SD+WSFG++L+EI + RV P + + PR+
Sbjct: 361 KKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD--------------------VVPRVE 400
Query: 320 NQYSINAAR----RVAKLADNCLKKNPEERPTMNQVVESLK 356
Y ++A V + NC + RPT Q+ E L+
Sbjct: 401 KGYKMDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLE 441
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 102/204 (50%), Gaps = 10/204 (4%)
Query: 79 KIGEGGFGSVYKGTIRPL-DGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLV 137
++G+G FGSV PL D GE VVAVKKL + + + + E++ L + H N+V
Sbjct: 35 QLGKGNFGSVEMCRYDPLQDNTGE--VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIV 92
Query: 138 KLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLH 197
K G C + R ++ L+ EY+P SL D L + + + L+ +G+ YL
Sbjct: 93 KYKGVCYSAGRRNLK--LIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYLG 149
Query: 198 EGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTG-DHTHVSTAVVGTYGYAAPEY 256
+ I+RD T N+L++ + K+ DFGL + P + V + APE
Sbjct: 150 TK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 206
Query: 257 IETGHLKSQSDIWSFGVVLYEILT 280
+ SD+WSFGVVLYE+ T
Sbjct: 207 LTESKFSVASDVWSFGVVLYELFT 230
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 102/205 (49%), Gaps = 15/205 (7%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHK-QWLAEVQFLGVVSHPNLVK 138
IG G FG VYKG ++ G+ E + VA+K L + + +L E +G SH N+++
Sbjct: 52 IGAGEFGEVYKGMLKTSSGKKE-VPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIR 110
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHE 198
L G S +++ EYM N +L D+ + ++ G A G+ YL
Sbjct: 111 LEGVISKYKPM----MIITEYMENGAL-DKFLREKDGEFSVLQLVGMLRGIAAGMKYLAN 165
Query: 199 GLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAR---EGPTGDHTHVSTAVVGTYGYAAPE 255
+ ++RD N+L++ N K+SDFGL+R + P +T + + APE
Sbjct: 166 ---MNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKI--PIRWTAPE 220
Query: 256 YIETGHLKSQSDIWSFGVVLYEILT 280
I S SD+WSFG+V++E++T
Sbjct: 221 AISYRKFTSASDVWSFGIVMWEVMT 245
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 99/216 (45%), Gaps = 21/216 (9%)
Query: 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVK 138
++GEG FG V+ L + ++VAVK L + L K + E + L + H ++VK
Sbjct: 22 ELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVK 81
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFS--------------RAQPTLPWKTRLE 184
G C D ++V+EYM + L L + +A+ L L
Sbjct: 82 FYGVCGDGDPL----IMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLH 137
Query: 185 IILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTA 244
I A G+ YL ++RD T N L+ N K+ DFG++R+ + D+ V
Sbjct: 138 IASQIASGMVYLASQ---HFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGH 194
Query: 245 VVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILT 280
+ + PE I ++SD+WSFGV+L+EI T
Sbjct: 195 TMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFT 230
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 126/285 (44%), Gaps = 32/285 (11%)
Query: 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVK 138
K+G G FG VY+G + L VAVK L ++ +++L E + + HPNLV+
Sbjct: 18 KLGGGQFGEVYEGVWKKYS-----LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQ 71
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHE 198
LLG C+ E I + E+M +L D L + + L + + + YL +
Sbjct: 72 LLGVCTREPPFYI----ITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK 127
Query: 199 GLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIE 258
I+RD N L+ N K++DFGL+R TGD + APE +
Sbjct: 128 K---NFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTXTAHAGAKFPIKWTAPESLA 183
Query: 259 TGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPA-DGKKFSMMIDPR 317
+SD+W+FGV+L+EI T + +P D + +++
Sbjct: 184 YNKFSIKSDVWAFGVLLWEIATYG-----------------MSPYPGIDPSQVYELLEKD 226
Query: 318 LRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQES 362
R + +V +L C + NP +RP+ ++ ++ + QES
Sbjct: 227 YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 271
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 102/204 (50%), Gaps = 10/204 (4%)
Query: 79 KIGEGGFGSVYKGTIRPL-DGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLV 137
++G+G FGSV PL D GE VVAVKKL + + + + E++ L + H N+V
Sbjct: 17 QLGKGNFGSVEMCRYDPLQDNTGE--VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIV 74
Query: 138 KLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLH 197
K G C + R ++ L+ EY+P SL D L + + + L+ +G+ YL
Sbjct: 75 KYKGVCYSAGRRNLK--LIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYLG 131
Query: 198 EGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTG-DHTHVSTAVVGTYGYAAPEY 256
+ I+RD T N+L++ + K+ DFGL + P + V + APE
Sbjct: 132 TK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPES 188
Query: 257 IETGHLKSQSDIWSFGVVLYEILT 280
+ SD+WSFGVVLYE+ T
Sbjct: 189 LTESKFSVASDVWSFGVVLYELFT 212
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 125/293 (42%), Gaps = 56/293 (19%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLN-----NHGLQGHKQWLAEVQFLGVVSHP 134
IG GGFG VY+ G+ + V + + + ++ +Q E + ++ HP
Sbjct: 15 IGIGGFGKVYRAF-----WIGDEVAVKAARHDPDEDISQTIENVRQ---EAKLFAMLKHP 66
Query: 135 NLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQP---TLPWKTRLEIILGAAE 191
N++ L G C E LV E+ L L + P + W ++ A
Sbjct: 67 NIIALRGVCLKEP----NLCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQI------AR 116
Query: 192 GLAYLHEGLEIQVIYRDFKTSNVLL-----DGNFKPKL---SDFGLAREGPTGDHTHVST 243
G+ YLH+ + +I+RD K+SN+L+ +G+ K+ +DFGLARE H
Sbjct: 117 GMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREW----HRTTKM 172
Query: 244 AVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQF 303
+ G Y + APE I SD+WS+GV+L+E+LTG V
Sbjct: 173 SAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGE-----------------VPFR 215
Query: 304 PADGKKFSMMIDP-RLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESL 355
DG + + +L AKL ++C +P RP+ +++ L
Sbjct: 216 GIDGLAVAYGVAMNKLALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQL 268
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 102/204 (50%), Gaps = 10/204 (4%)
Query: 79 KIGEGGFGSVYKGTIRPL-DGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLV 137
++G+G FGSV PL D GE VVAVKKL + + + + E++ L + H N+V
Sbjct: 35 QLGKGNFGSVEMCRYDPLQDNTGE--VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIV 92
Query: 138 KLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLH 197
K G C + R ++ L+ EY+P SL D L + + + L+ +G+ YL
Sbjct: 93 KYKGVCYSAGRRNLK--LIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYLG 149
Query: 198 EGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTG-DHTHVSTAVVGTYGYAAPEY 256
+ I+RD T N+L++ + K+ DFGL + P + V + APE
Sbjct: 150 TK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 206
Query: 257 IETGHLKSQSDIWSFGVVLYEILT 280
+ SD+WSFGVVLYE+ T
Sbjct: 207 LTESKFSVASDVWSFGVVLYELFT 230
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 142/301 (47%), Gaps = 48/301 (15%)
Query: 70 ATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKL---NNHG----LQGHKQWL 122
A N +IG+GGFG V+KG + + VVA+K L ++ G ++ +++
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRL-----VKDKSVVAIKSLILGDSEGETEMIEKFQEFQ 71
Query: 123 AEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTR 182
EV + ++HPN+VKL G +V E++P L RL +A P + W +
Sbjct: 72 REVFIMSNLNHPNIVKLYGLMHNPPR------MVMEFVPCGDLYHRLLDKAHP-IKWSVK 124
Query: 183 LEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLL-----DGNFKPKLSDFGLAREGPTGD 237
L ++L A G+ Y+ + +++RD ++ N+ L + K++DFGL+++
Sbjct: 125 LRLMLDIALGIEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQS---- 179
Query: 238 HTHVSTAVVGTYGYAAPEYI--ETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQK 295
H + ++G + + APE I E ++D +SF ++LY ILTG +
Sbjct: 180 -VHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD--------- 229
Query: 296 LLEWVKQFPADGKKFSMMI-DPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVES 354
++ KF MI + LR + R+ + + C +P++RP + +V+
Sbjct: 230 ------EYSYGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKE 283
Query: 355 L 355
L
Sbjct: 284 L 284
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 132/287 (45%), Gaps = 32/287 (11%)
Query: 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG-LQGHKQWLAEVQFLGVVSHPNLV 137
++G+G FG VY+G R + VAVK +N L+ ++L E + + ++V
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 138 KLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFS-----RAQPTLPWKTRLEIILGAAE- 191
+LLG S +G L+V E M + L+ L S P P T E+I AAE
Sbjct: 84 RLLGVVS----KGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 139
Query: 192 --GLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTY 249
G+AYL+ + ++R+ N ++ +F K+ DFG+ R+ D+ +
Sbjct: 140 ADGMAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 196
Query: 250 GYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKK 309
+ APE ++ G + SD+WSFGVVL+EI + L E Q ++ +
Sbjct: 197 RWMAPESLKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLSNEQV 241
Query: 310 FSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLK 356
++D +Q N RV L C + NP RPT ++V LK
Sbjct: 242 LKFVMDGGYLDQPD-NCPERVTDLMRMCWQFNPNMRPTFLEIVNLLK 287
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 143/311 (45%), Gaps = 35/311 (11%)
Query: 49 PELYKEKEHHLRVFDMQELREATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVK 108
PE Y++ + F +EL + R+ IG G FG V G ++ L G+ + + VA+K
Sbjct: 23 PETYEDPNRAVHQF-AKELDASCIKIERV--IGAGEFGEVCSGRLK-LPGKRD-VAVAIK 77
Query: 109 KLN-NHGLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLED 167
L + + + +L E +G HPN+V L G + RG ++V E+M N +L D
Sbjct: 78 TLKVGYTEKQRRDFLCEASIMGQFDHPNVVHLEGVVT----RGKPVMIVIEFMENGAL-D 132
Query: 168 RLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDF 227
+ + ++ G A G+ YL ++ ++RD N+L++ N K+SDF
Sbjct: 133 AFLRKHDGQFTVIQLVGMLRGIAAGMRYL---ADMGYVHRDLAARNILVNSNLVCKVSDF 189
Query: 228 GLAR---EGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRV 284
GL+R + P +T + + APE I+ S SD+WS+G+V++E+++
Sbjct: 190 GLSRVIEDDPEAVYTTTGGKI--PVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS---- 243
Query: 285 LERNRPTMEQKLLEWVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEE 344
RP + + +K I+ R ++ + +L +C +K E
Sbjct: 244 -YGERPYWDMSNQDVIKA-----------IEEGYRLPAPMDCPAGLHQLMLDCWQKERAE 291
Query: 345 RPTMNQVVESL 355
RP Q+V L
Sbjct: 292 RPKFEQIVGIL 302
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 132/287 (45%), Gaps = 32/287 (11%)
Query: 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG-LQGHKQWLAEVQFLGVVSHPNLV 137
++G+G FG VY+G R + VAVK +N L+ ++L E + + ++V
Sbjct: 25 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 84
Query: 138 KLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFS-----RAQPTLPWKTRLEIILGAAE- 191
+LLG S +G L+V E M + L+ L S P P T E+I AAE
Sbjct: 85 RLLGVVS----KGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 140
Query: 192 --GLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTY 249
G+AYL+ + ++R+ N ++ +F K+ DFG+ R+ D+ +
Sbjct: 141 ADGMAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 197
Query: 250 GYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKK 309
+ APE ++ G + SD+WSFGVVL+EI + L E Q ++ +
Sbjct: 198 RWMAPESLKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLSNEQV 242
Query: 310 FSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLK 356
++D +Q N RV L C + NP RPT ++V LK
Sbjct: 243 LKFVMDGGYLDQPD-NCPERVTDLMRMCWQFNPNMRPTFLEIVNLLK 288
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 147/329 (44%), Gaps = 39/329 (11%)
Query: 42 LPSPR--SIPELYKEKEHHLRVFDMQELREATNGFNRMLKIGEGGFGSVYKGTIRPLDGR 99
LP P+ + P Y+E R F +E+ + ++ IG G G V G +R R
Sbjct: 20 LPEPQFYAEPHTYEEPGRAGRSF-TREIEASRIHIEKI--IGSGDSGEVCYGRLRVPGQR 76
Query: 100 GEPLVVAVKKLN-NHGLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYE 158
P VA+K L + + + +L+E +G HPN+++L G + RG ++V E
Sbjct: 77 DVP--VAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVT----RGRLAMIVTE 130
Query: 159 YMPNRSLEDRLFSR-AQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLD 217
YM N SL+ L + Q T+ + ++ G G+ YL + + ++RD NVL+D
Sbjct: 131 YMENGSLDTFLRTHDGQFTI--MQLVGMLRGVGAGMRYLSD---LGYVHRDLAARNVLVD 185
Query: 218 GNFKPKLSDFGLAR---EGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVV 274
N K+SDFGL+R + P D +T + APE I S SD+WSFGVV
Sbjct: 186 SNLVCKVSDFGLSRVLEDDP--DAAXTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVV 243
Query: 275 LYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLA 334
++E+L RP + + ++ R + + +L
Sbjct: 244 MWEVLA-----YGERPYWNMTNRDVISS-----------VEEGYRLPAPMGCPHALHQLM 287
Query: 335 DNCLKKNPEERPTMNQVVESLKLAVQESE 363
+C K+ +RP +Q+V L ++ E
Sbjct: 288 LDCWHKDRAQRPRFSQIVSVLDALIRSPE 316
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 124/281 (44%), Gaps = 44/281 (15%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKL 139
IG+G FG V G D RG VAVK + N + +LAE + + H NLV+L
Sbjct: 20 IGKGEFGDVMLG-----DYRGNK--VAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQL 70
Query: 140 LGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEG 199
LG E++ G+ +V EYM SL D L SR + L L+ L E + YL
Sbjct: 71 LGVI-VEEKGGLY--IVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN 127
Query: 200 LEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIET 259
++RD NVL+ + K+SDFGL +E + T + APE +
Sbjct: 128 ---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPV-----KWTAPEALRE 179
Query: 260 GHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKFSMMIDPRLR 319
++SD+WSFG++L+EI + RV P + + PR+
Sbjct: 180 AAFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD--------------------VVPRVE 219
Query: 320 NQYSINAAR----RVAKLADNCLKKNPEERPTMNQVVESLK 356
Y ++A V ++ NC + RP+ Q+ E L+
Sbjct: 220 KGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLE 260
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 124/281 (44%), Gaps = 44/281 (15%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKL 139
IG+G FG V G D RG VAVK + N + +LAE + + H NLV+L
Sbjct: 14 IGKGEFGDVMLG-----DYRGNK--VAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQL 64
Query: 140 LGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEG 199
LG E++ G+ +V EYM SL D L SR + L L+ L E + YL
Sbjct: 65 LGVI-VEEKGGLY--IVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN 121
Query: 200 LEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIET 259
++RD NVL+ + K+SDFGL +E + T + APE +
Sbjct: 122 ---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPV-----KWTAPEALRE 173
Query: 260 GHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKFSMMIDPRLR 319
++SD+WSFG++L+EI + RV P + + PR+
Sbjct: 174 KKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD--------------------VVPRVE 213
Query: 320 NQYSINAAR----RVAKLADNCLKKNPEERPTMNQVVESLK 356
Y ++A V ++ NC + RP+ Q+ E L+
Sbjct: 214 KGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLE 254
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 124/273 (45%), Gaps = 36/273 (13%)
Query: 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVK 138
++G G FG V+ G +G + VAVK L G +LAE + + H LV+
Sbjct: 25 RLGAGQFGEVWMGY---YNGHTK---VAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVR 77
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHE 198
L + E ++ EYM N SL D L + + L L++ AEG+A++ E
Sbjct: 78 LYAVVTQE-----PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 132
Query: 199 GLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIE 258
I+RD + +N+L+ K++DFGLAR ++T A + APE I
Sbjct: 133 R---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPI-KWTAPEAIN 188
Query: 259 TGHLKSQSDIWSFGVVLYEILTGRRVLE--RNRPTMEQKLLEWVKQFPADGKKFSMMIDP 316
G +SD+WSFG++L EI+T R+ P + Q L ++ M+ P
Sbjct: 189 YGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL-----------ERGYRMVRP 237
Query: 317 RLRNQYSINAARRVAKLADNCLKKNPEERPTMN 349
N + +L C K+ PE+RPT +
Sbjct: 238 D-------NCPEELYQLMRLCWKERPEDRPTFD 263
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 124/273 (45%), Gaps = 36/273 (13%)
Query: 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVK 138
++G G FG V+ G +G + VAVK L G +LAE + + H LV+
Sbjct: 26 RLGAGQFGEVWMGY---YNGHTK---VAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVR 78
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHE 198
L + E ++ EYM N SL D L + + L L++ AEG+A++ E
Sbjct: 79 LYAVVTQEP-----IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 133
Query: 199 GLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIE 258
I+RD + +N+L+ K++DFGLAR ++T A + APE I
Sbjct: 134 R---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPI-KWTAPEAIN 189
Query: 259 TGHLKSQSDIWSFGVVLYEILTGRRVLE--RNRPTMEQKLLEWVKQFPADGKKFSMMIDP 316
G +SD+WSFG++L EI+T R+ P + Q L ++ M+ P
Sbjct: 190 YGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL-----------ERGYRMVRP 238
Query: 317 RLRNQYSINAARRVAKLADNCLKKNPEERPTMN 349
N + +L C K+ PE+RPT +
Sbjct: 239 D-------NCPEELYQLMRLCWKERPEDRPTFD 264
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 103/204 (50%), Gaps = 10/204 (4%)
Query: 79 KIGEGGFGSVYKGTIRPL-DGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLV 137
++G+G FGSV PL D GE VVAVKKL + + + + E++ L + H N+V
Sbjct: 18 QLGKGNFGSVEMCRYDPLQDNTGE--VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIV 75
Query: 138 KLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLH 197
K G C + R ++ L+ EY+P SL D L + + + L+ +G+ YL
Sbjct: 76 KYKGVCYSAGRRNLK--LIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYLG 132
Query: 198 EGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTG-DHTHVSTAVVGTYGYAAPEY 256
+ I+R+ T N+L++ + K+ DFGL + P ++ V + APE
Sbjct: 133 TK---RYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPES 189
Query: 257 IETGHLKSQSDIWSFGVVLYEILT 280
+ SD+WSFGVVLYE+ T
Sbjct: 190 LTESKFSVASDVWSFGVVLYELFT 213
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 124/281 (44%), Gaps = 44/281 (15%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKL 139
IG+G FG V G D RG VAVK + N + +LAE + + H NLV+L
Sbjct: 29 IGKGEFGDVMLG-----DYRGNK--VAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQL 79
Query: 140 LGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEG 199
LG E++ G+ +V EYM SL D L SR + L L+ L E + YL
Sbjct: 80 LGVI-VEEKGGL--YIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN 136
Query: 200 LEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIET 259
++RD NVL+ + K+SDFGL +E + T + APE +
Sbjct: 137 ---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPV-----KWTAPEALRE 188
Query: 260 GHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKFSMMIDPRLR 319
++SD+WSFG++L+EI + RV P + + PR+
Sbjct: 189 KKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD--------------------VVPRVE 228
Query: 320 NQYSINAAR----RVAKLADNCLKKNPEERPTMNQVVESLK 356
Y ++A V ++ NC + RP+ Q+ E L+
Sbjct: 229 KGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLE 269
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 124/273 (45%), Gaps = 36/273 (13%)
Query: 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVK 138
++G G FG V+ G +G + VAVK L G +LAE + + H LV+
Sbjct: 20 RLGAGQFGEVWMGY---YNGHTK---VAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVR 72
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHE 198
L + E ++ EYM N SL D L + + L L++ AEG+A++ E
Sbjct: 73 LYAVVTQE-----PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 127
Query: 199 GLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIE 258
I+RD + +N+L+ K++DFGLAR ++T A + APE I
Sbjct: 128 R---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPI-KWTAPEAIN 183
Query: 259 TGHLKSQSDIWSFGVVLYEILTGRRVLE--RNRPTMEQKLLEWVKQFPADGKKFSMMIDP 316
G +SD+WSFG++L EI+T R+ P + Q L ++ M+ P
Sbjct: 184 YGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL-----------ERGYRMVRP 232
Query: 317 RLRNQYSINAARRVAKLADNCLKKNPEERPTMN 349
N + +L C K+ PE+RPT +
Sbjct: 233 D-------NCPEELYQLMRLCWKERPEDRPTFD 258
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 124/273 (45%), Gaps = 36/273 (13%)
Query: 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVK 138
++G G FG V+ G +G + VAVK L G +LAE + + H LV+
Sbjct: 30 RLGAGQFGEVWMGY---YNGHTK---VAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVR 82
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHE 198
L + E ++ EYM N SL D L + + L L++ AEG+A++ E
Sbjct: 83 LYAVVTQEP-----IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 137
Query: 199 GLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIE 258
I+RD + +N+L+ K++DFGLAR ++T A + APE I
Sbjct: 138 R---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPI-KWTAPEAIN 193
Query: 259 TGHLKSQSDIWSFGVVLYEILTGRRVLE--RNRPTMEQKLLEWVKQFPADGKKFSMMIDP 316
G +SD+WSFG++L EI+T R+ P + Q L ++ M+ P
Sbjct: 194 YGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL-----------ERGYRMVRP 242
Query: 317 RLRNQYSINAARRVAKLADNCLKKNPEERPTMN 349
N + +L C K+ PE+RPT +
Sbjct: 243 D-------NCPEELYQLMRLCWKERPEDRPTFD 268
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 124/273 (45%), Gaps = 36/273 (13%)
Query: 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVK 138
++G G FG V+ G +G + VAVK L G +LAE + + H LV+
Sbjct: 15 RLGAGQFGEVWMGY---YNGHTK---VAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVR 67
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHE 198
L + E ++ EYM N SL D L + + L L++ AEG+A++ E
Sbjct: 68 LYAVVTQE-----PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 122
Query: 199 GLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIE 258
I+RD + +N+L+ K++DFGLAR ++T A + APE I
Sbjct: 123 R---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPI-KWTAPEAIN 178
Query: 259 TGHLKSQSDIWSFGVVLYEILTGRRVLE--RNRPTMEQKLLEWVKQFPADGKKFSMMIDP 316
G +SD+WSFG++L EI+T R+ P + Q L ++ M+ P
Sbjct: 179 YGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL-----------ERGYRMVRP 227
Query: 317 RLRNQYSINAARRVAKLADNCLKKNPEERPTMN 349
N + +L C K+ PE+RPT +
Sbjct: 228 D-------NCPEELYQLMRLCWKERPEDRPTFD 253
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 133/287 (46%), Gaps = 40/287 (13%)
Query: 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG-----LQGHKQWLAEVQFLGVVSH 133
+IG G FG+VYKG G+ VAVK LN LQ K EV L H
Sbjct: 15 RIGSGSFGTVYKG-----KWHGD---VAVKMLNVTAPTPQQLQAFKN---EVGVLRKTRH 63
Query: 134 PNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGL 193
N++ +GY + Q +V ++ SL L + ++I A+G+
Sbjct: 64 VNILLFMGYSTAP-----QLAIVTQWCEGSSLYHHLHI-IETKFEMIKLIDIARQTAQGM 117
Query: 194 AYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAA 253
YLH +I+RD K++N+ L + K+ DFGLA +H + G+ + A
Sbjct: 118 DYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMA 174
Query: 254 PEYI---ETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKF 310
PE I + QSD+++FG+VLYE++TG+ L + +++ V G+ +
Sbjct: 175 PEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ--LPYSNINNRDQIIFMV------GRGY 226
Query: 311 SMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKL 357
+ P L S N + + +L CLKK +ERP Q++ S++L
Sbjct: 227 ---LSPDLSKVRS-NCPKAMKRLMAECLKKKRDERPLFPQILASIEL 269
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 132/287 (45%), Gaps = 32/287 (11%)
Query: 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG-LQGHKQWLAEVQFLGVVSHPNLV 137
++G+G FG VY+G R + VAVK +N L+ ++L E + + ++V
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 138 KLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFS-----RAQPTLPWKTRLEIILGAAE- 191
+LLG S +G L+V E M + L+ L S P P T E+I AAE
Sbjct: 84 RLLGVVS----KGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 139
Query: 192 --GLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTY 249
G+AYL+ + ++RD N ++ +F K+ DFG+ R+ + +
Sbjct: 140 ADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPV 196
Query: 250 GYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKK 309
+ APE ++ G + SD+WSFGVVL+EI + L E Q ++ +
Sbjct: 197 RWMAPESLKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLSNEQV 241
Query: 310 FSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLK 356
++D +Q N RV L C + NP+ RPT ++V LK
Sbjct: 242 LKFVMDGGYLDQPD-NCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 287
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 133/287 (46%), Gaps = 40/287 (13%)
Query: 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG-----LQGHKQWLAEVQFLGVVSH 133
+IG G FG+VYKG G+ VAVK LN LQ K EV L H
Sbjct: 42 RIGSGSFGTVYKGK-----WHGD---VAVKMLNVTAPTPQQLQAFKN---EVGVLRKTRH 90
Query: 134 PNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGL 193
N++ +GY + Q +V ++ SL L + ++I A+G+
Sbjct: 91 VNILLFMGYSTKP-----QLAIVTQWCEGSSLYHHLHI-IETKFEMIKLIDIARQTAQGM 144
Query: 194 AYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAA 253
YLH +I+RD K++N+ L + K+ DFGLA +H + G+ + A
Sbjct: 145 DYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMA 201
Query: 254 PEYI---ETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKF 310
PE I + QSD+++FG+VLYE++TG+ L + +++ V G+ +
Sbjct: 202 PEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ--LPYSNINNRDQIIFMV------GRGY 253
Query: 311 SMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKL 357
+ P L S N + + +L CLKK +ERP Q++ S++L
Sbjct: 254 ---LSPDLSKVRS-NCPKAMKRLMAECLKKKRDERPLFPQILASIEL 296
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 133/287 (46%), Gaps = 40/287 (13%)
Query: 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG-----LQGHKQWLAEVQFLGVVSH 133
+IG G FG+VYKG G+ VAVK LN LQ K EV L H
Sbjct: 17 RIGSGSFGTVYKG-----KWHGD---VAVKMLNVTAPTPQQLQAFKN---EVGVLRKTRH 65
Query: 134 PNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGL 193
N++ +GY + Q +V ++ SL L + ++I A+G+
Sbjct: 66 VNILLFMGYSTKP-----QLAIVTQWCEGSSLYHHLHI-IETKFEMIKLIDIARQTAQGM 119
Query: 194 AYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAA 253
YLH +I+RD K++N+ L + K+ DFGLA +H + G+ + A
Sbjct: 120 DYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMA 176
Query: 254 PEYI---ETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKF 310
PE I + QSD+++FG+VLYE++TG+ L + +++ V G+ +
Sbjct: 177 PEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ--LPYSNINNRDQIIFMV------GRGY 228
Query: 311 SMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKL 357
+ P L S N + + +L CLKK +ERP Q++ S++L
Sbjct: 229 ---LSPDLSKVRS-NCPKAMKRLMAECLKKKRDERPLFPQILASIEL 271
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 133/287 (46%), Gaps = 40/287 (13%)
Query: 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG-----LQGHKQWLAEVQFLGVVSH 133
+IG G FG+VYKG G+ VAVK LN LQ K EV L H
Sbjct: 15 RIGSGSFGTVYKG-----KWHGD---VAVKMLNVTAPTPQQLQAFKN---EVGVLRKTRH 63
Query: 134 PNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGL 193
N++ +GY + Q +V ++ SL L + ++I A+G+
Sbjct: 64 VNILLFMGYSTKP-----QLAIVTQWCEGSSLYHHLHI-IETKFEMIKLIDIARQTAQGM 117
Query: 194 AYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAA 253
YLH +I+RD K++N+ L + K+ DFGLA +H + G+ + A
Sbjct: 118 DYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMA 174
Query: 254 PEYI---ETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKF 310
PE I + QSD+++FG+VLYE++TG+ L + +++ V G+ +
Sbjct: 175 PEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ--LPYSNINNRDQIIFMV------GRGY 226
Query: 311 SMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKL 357
+ P L S N + + +L CLKK +ERP Q++ S++L
Sbjct: 227 ---LSPDLSKVRS-NCPKAMKRLMAECLKKKRDERPLFPQILASIEL 269
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 133/287 (46%), Gaps = 40/287 (13%)
Query: 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG-----LQGHKQWLAEVQFLGVVSH 133
+IG G FG+VYKG G+ VAVK LN LQ K EV L H
Sbjct: 20 RIGSGSFGTVYKGK-----WHGD---VAVKMLNVTAPTPQQLQAFKN---EVGVLRKTRH 68
Query: 134 PNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGL 193
N++ +GY + Q +V ++ SL L + ++I A+G+
Sbjct: 69 VNILLFMGYSTKP-----QLAIVTQWCEGSSLYHHLHI-IETKFEMIKLIDIARQTAQGM 122
Query: 194 AYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAA 253
YLH +I+RD K++N+ L + K+ DFGLA +H + G+ + A
Sbjct: 123 DYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMA 179
Query: 254 PEYI---ETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKF 310
PE I + QSD+++FG+VLYE++TG+ L + +++ V G+ +
Sbjct: 180 PEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ--LPYSNINNRDQIIFMV------GRGY 231
Query: 311 SMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKL 357
+ P L S N + + +L CLKK +ERP Q++ S++L
Sbjct: 232 ---LSPDLSKVRS-NCPKAMKRLMAECLKKKRDERPLFPQILASIEL 274
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 133/287 (46%), Gaps = 40/287 (13%)
Query: 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG-----LQGHKQWLAEVQFLGVVSH 133
+IG G FG+VYKG G+ VAVK LN LQ K EV L H
Sbjct: 43 RIGSGSFGTVYKGK-----WHGD---VAVKMLNVTAPTPQQLQAFKN---EVGVLRKTRH 91
Query: 134 PNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGL 193
N++ +GY + Q +V ++ SL L + ++I A+G+
Sbjct: 92 VNILLFMGYSTKP-----QLAIVTQWCEGSSLYHHLHI-IETKFEMIKLIDIARQTAQGM 145
Query: 194 AYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAA 253
YLH +I+RD K++N+ L + K+ DFGLA +H + G+ + A
Sbjct: 146 DYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMA 202
Query: 254 PEYI---ETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKF 310
PE I + QSD+++FG+VLYE++TG+ L + +++ V G+ +
Sbjct: 203 PEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ--LPYSNINNRDQIIFMV------GRGY 254
Query: 311 SMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKL 357
+ P L S N + + +L CLKK +ERP Q++ S++L
Sbjct: 255 ---LSPDLSKVRS-NCPKAMKRLMAECLKKKRDERPLFPQILASIEL 297
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 136/281 (48%), Gaps = 38/281 (13%)
Query: 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVK 138
++G G FG V G + G+ + VAVK + G ++ E Q + +SHP LVK
Sbjct: 15 ELGSGQFGVVKLGKWK---GQYD---VAVKMIKE-GSMSEDEFFQEAQTMMKLSHPKLVK 67
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHE 198
G CS E +V EY+ N L + L S + P LE+ EG+A+L
Sbjct: 68 FYGVCSKE----YPIYIVTEYISNGCLLNYLRSHGKGLEP-SQLLEMCYDVCEGMAFLES 122
Query: 199 GLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGT---YGYAAPE 255
Q I+RD N L+D + K+SDFG+ R D +VS+ VGT ++APE
Sbjct: 123 H---QFIHRDLAARNCLVDRDLCVKVSDFGMTRY--VLDDQYVSS--VGTKFPVKWSAPE 175
Query: 256 YIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKFSMMID 315
S+SD+W+FG++++E+ + + + + T + +L+ + G + +
Sbjct: 176 VFHYFKYSSKSDVWAFGILMWEVFSLGK-MPYDLYTNSEVVLK-----VSQGHR---LYR 226
Query: 316 PRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLK 356
P L A+ + ++ +C + PE+RPT Q++ S++
Sbjct: 227 PHL-------ASDTIYQIMYSCWHELPEKRPTFQQLLSSIE 260
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 127/285 (44%), Gaps = 32/285 (11%)
Query: 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVK 138
K+G G +G VY+G + L VAVK L ++ +++L E + + HPNLV+
Sbjct: 18 KLGGGQYGEVYEGVWKKYS-----LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQ 71
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHE 198
LLG C+ E I + E+M +L D L + + L + + + YL +
Sbjct: 72 LLGVCTREPPFYI----IIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK 127
Query: 199 GLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIE 258
I+RD N L+ N K++DFGL+R TGD + APE +
Sbjct: 128 K---NFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTXTAHAGAKFPIKWTAPESLA 183
Query: 259 TGHLKSQSDIWSFGVVLYEILT-GRRVLERNRPTMEQKLLEWVKQFPADGKKFSMMIDPR 317
+SD+W+FGV+L+EI T G P+ +LLE K +
Sbjct: 184 YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLE--KDY-------------- 227
Query: 318 LRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQES 362
R + +V +L C + NP +RP+ ++ ++ + QES
Sbjct: 228 -RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 271
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 133/287 (46%), Gaps = 40/287 (13%)
Query: 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG-----LQGHKQWLAEVQFLGVVSH 133
+IG G FG+VYKG G+ VAVK LN LQ K EV L H
Sbjct: 20 RIGSGSFGTVYKGK-----WHGD---VAVKMLNVTAPTPQQLQAFKN---EVGVLRKTRH 68
Query: 134 PNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGL 193
N++ +GY + Q +V ++ SL L + ++I A+G+
Sbjct: 69 VNILLFMGYSTKP-----QLAIVTQWCEGSSLYHHLHI-IETKFEMIKLIDIARQTAQGM 122
Query: 194 AYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAA 253
YLH +I+RD K++N+ L + K+ DFGLA +H + G+ + A
Sbjct: 123 DYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMA 179
Query: 254 PEYI---ETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKF 310
PE I + QSD+++FG+VLYE++TG+ L + +++ V G+ +
Sbjct: 180 PEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ--LPYSNINNRDQIIFMV------GRGY 231
Query: 311 SMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKL 357
+ P L S N + + +L CLKK +ERP Q++ S++L
Sbjct: 232 ---LSPDLSKVRS-NCPKAMKRLMAECLKKKRDERPLFPQILASIEL 274
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 123/273 (45%), Gaps = 36/273 (13%)
Query: 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVK 138
++G G FG V+ G +G + VAVK L G +LAE + + H LV+
Sbjct: 28 RLGAGQFGEVWMGY---YNGHTK---VAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVR 80
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHE 198
L + E ++ EYM N SL D L + + L L++ AEG+A++ E
Sbjct: 81 LYAVVTQEP-----IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 135
Query: 199 GLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIE 258
I+RD + +N+L+ K++DFGLAR + T A + APE I
Sbjct: 136 R---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI-KWTAPEAIN 191
Query: 259 TGHLKSQSDIWSFGVVLYEILTGRRVLE--RNRPTMEQKLLEWVKQFPADGKKFSMMIDP 316
G +SD+WSFG++L EI+T R+ P + Q L ++ M+ P
Sbjct: 192 YGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL-----------ERGYRMVRP 240
Query: 317 RLRNQYSINAARRVAKLADNCLKKNPEERPTMN 349
N + +L C K+ PE+RPT +
Sbjct: 241 D-------NCPEELYQLMRLCWKERPEDRPTFD 266
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 138/284 (48%), Gaps = 38/284 (13%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKL-NNHGLQGHKQWLAEVQFLGVVSHPNLVK 138
IG G FG V G ++ L G+ E + VA+K L + + + + +L+E +G HPN++
Sbjct: 15 IGAGEFGEVCSGHLK-LPGKRE-IFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIH 72
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHE 198
L G + + +++ E+M N SL D + + ++ G A G+ YL +
Sbjct: 73 LEGVVT----KSTPVMIITEFMENGSL-DSFLRQNDGQFTVIQLVGMLRGIAAGMKYLAD 127
Query: 199 GLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAR--EGPTGDHTHVSTAVVGTYG--YAAP 254
+ ++R N+L++ N K+SDFGL+R E T D T+ S A+ G + AP
Sbjct: 128 ---MNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTS-ALGGKIPIRWTAP 183
Query: 255 EYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTME---QKLLEWVKQFPADGKKFS 311
E I+ S SD+WS+G+V++E+++ RP + Q ++ ++Q
Sbjct: 184 EAIQYRKFTSASDVWSYGIVMWEVMS-----YGERPYWDMTNQDVINAIEQ--------- 229
Query: 312 MMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESL 355
D RL +A + +L +C +K+ RP Q+V +L
Sbjct: 230 ---DYRLPPPMDCPSA--LHQLMLDCWQKDRNHRPKFGQIVNTL 268
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 126/285 (44%), Gaps = 32/285 (11%)
Query: 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVK 138
K+G G +G VY+G + L VAVK L ++ +++L E + + HPNLV+
Sbjct: 21 KLGGGQYGEVYEGVWKKYS-----LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQ 74
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHE 198
LLG C+ E I + E+M +L D L + + L + + + YL +
Sbjct: 75 LLGVCTREPPFYI----IIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK 130
Query: 199 GLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIE 258
I+RD N L+ N K++DFGL+R TGD + APE +
Sbjct: 131 K---NFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTXTAHAGAKFPIKWTAPESLA 186
Query: 259 TGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPA-DGKKFSMMIDPR 317
+SD+W+FGV+L+EI T + +P D + +++
Sbjct: 187 YNKFSIKSDVWAFGVLLWEIATYG-----------------MSPYPGIDLSQVYELLEKD 229
Query: 318 LRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQES 362
R + +V +L C + NP +RP+ ++ ++ + QES
Sbjct: 230 YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 274
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 108/221 (48%), Gaps = 14/221 (6%)
Query: 66 ELREATNGFNRMLK----IGEGGFGSVYKGTIRPL-DGRGEPLVVAVKKLNNHGLQGHKQ 120
E R+ T R LK +G+G FGSV PL D GE VVAVKKL + + +
Sbjct: 3 EDRDPTQFEERHLKFLRQLGKGNFGSVEMCRYDPLQDNTGE--VVAVKKLQHSTEEHLRD 60
Query: 121 WLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWK 180
+ E++ L + H N+VK G C + R ++ L+ E++P SL + L + + +
Sbjct: 61 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLK--LIMEFLPYGSLREYL-QKHKERIDHI 117
Query: 181 TRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTG-DHT 239
L+ +G+ YL + I+RD T N+L++ + K+ DFGL + P +
Sbjct: 118 KLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXX 174
Query: 240 HVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILT 280
V + APE + SD+WSFGVVLYE+ T
Sbjct: 175 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 123/273 (45%), Gaps = 36/273 (13%)
Query: 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVK 138
++G G FG V+ G +G + VAVK L G +LAE + + H LV+
Sbjct: 26 RLGAGQFGEVWMGY---YNGHTK---VAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVR 78
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHE 198
L + E ++ EYM N SL D L + + L L++ AEG+A++ E
Sbjct: 79 LYAVVTQEP-----IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 133
Query: 199 GLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIE 258
I+RD + +N+L+ K++DFGLAR + T A + APE I
Sbjct: 134 R---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI-KWTAPEAIN 189
Query: 259 TGHLKSQSDIWSFGVVLYEILTGRRVLE--RNRPTMEQKLLEWVKQFPADGKKFSMMIDP 316
G +SD+WSFG++L EI+T R+ P + Q L ++ M+ P
Sbjct: 190 YGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL-----------ERGYRMVRP 238
Query: 317 RLRNQYSINAARRVAKLADNCLKKNPEERPTMN 349
N + +L C K+ PE+RPT +
Sbjct: 239 D-------NCPEELYQLMRLCWKERPEDRPTFD 264
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 123/273 (45%), Gaps = 36/273 (13%)
Query: 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVK 138
++G G FG V+ G +G + VAVK L G +LAE + + H LV+
Sbjct: 29 RLGAGQFGEVWMGY---YNGHTK---VAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVR 81
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHE 198
L + E ++ EYM N SL D L + + L L++ AEG+A++ E
Sbjct: 82 LYAVVTQEP-----IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 136
Query: 199 GLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIE 258
I+RD + +N+L+ K++DFGLAR + T A + APE I
Sbjct: 137 R---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI-KWTAPEAIN 192
Query: 259 TGHLKSQSDIWSFGVVLYEILTGRRVLE--RNRPTMEQKLLEWVKQFPADGKKFSMMIDP 316
G +SD+WSFG++L EI+T R+ P + Q L ++ M+ P
Sbjct: 193 YGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL-----------ERGYRMVRP 241
Query: 317 RLRNQYSINAARRVAKLADNCLKKNPEERPTMN 349
N + +L C K+ PE+RPT +
Sbjct: 242 D-------NCPEELYQLMRLCWKERPEDRPTFD 267
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 126/285 (44%), Gaps = 32/285 (11%)
Query: 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVK 138
K+G G +G VY+G + L VAVK L ++ +++L E + + HPNLV+
Sbjct: 18 KLGGGQYGEVYEGVWKKYS-----LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQ 71
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHE 198
LLG C+ E I + E+M +L D L + + L + + + YL +
Sbjct: 72 LLGVCTREPPFYI----ITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK 127
Query: 199 GLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIE 258
I+RD N L+ N K++DFGL+R TGD + APE +
Sbjct: 128 K---NFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTFTAHAGAKFPIKWTAPESLA 183
Query: 259 TGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPA-DGKKFSMMIDPR 317
+SD+W+FGV+L+EI T + +P D + +++
Sbjct: 184 YNKFSIKSDVWAFGVLLWEIATYG-----------------MSPYPGIDPSQVYELLEKD 226
Query: 318 LRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQES 362
R + +V +L C + NP +RP+ ++ ++ + QES
Sbjct: 227 YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 271
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 123/273 (45%), Gaps = 36/273 (13%)
Query: 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVK 138
++G G FG V+ G +G + VAVK L G +LAE + + H LV+
Sbjct: 21 RLGAGQFGEVWMGY---YNGHTK---VAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVR 73
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHE 198
L + E ++ EYM N SL D L + + L L++ AEG+A++ E
Sbjct: 74 LYAVVTQE-----PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 128
Query: 199 GLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIE 258
I+RD + +N+L+ K++DFGLAR + T A + APE I
Sbjct: 129 R---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI-KWTAPEAIN 184
Query: 259 TGHLKSQSDIWSFGVVLYEILTGRRVLE--RNRPTMEQKLLEWVKQFPADGKKFSMMIDP 316
G +SD+WSFG++L EI+T R+ P + Q L ++ M+ P
Sbjct: 185 YGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL-----------ERGYRMVRP 233
Query: 317 RLRNQYSINAARRVAKLADNCLKKNPEERPTMN 349
N + +L C K+ PE+RPT +
Sbjct: 234 D-------NCPEELYQLMRLCWKERPEDRPTFD 259
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 123/273 (45%), Gaps = 36/273 (13%)
Query: 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVK 138
++G G FG V+ G +G + VAVK L G +LAE + + H LV+
Sbjct: 20 RLGAGQFGEVWMGY---YNGHTK---VAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVR 72
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHE 198
L + E ++ EYM N SL D L + + L L++ AEG+A++ E
Sbjct: 73 LYAVVTQEP-----IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 127
Query: 199 GLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIE 258
I+RD + +N+L+ K++DFGLAR + T A + APE I
Sbjct: 128 R---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI-KWTAPEAIN 183
Query: 259 TGHLKSQSDIWSFGVVLYEILTGRRVLE--RNRPTMEQKLLEWVKQFPADGKKFSMMIDP 316
G +SD+WSFG++L EI+T R+ P + Q L ++ M+ P
Sbjct: 184 YGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL-----------ERGYRMVRP 232
Query: 317 RLRNQYSINAARRVAKLADNCLKKNPEERPTMN 349
N + +L C K+ PE+RPT +
Sbjct: 233 D-------NCPEELYQLMRLCWKERPEDRPTFD 258
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 129/287 (44%), Gaps = 33/287 (11%)
Query: 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHK--QWLAEVQFLGVVSHPNL 136
KIG G FG+V++ D VAVK L + ++L EV + + HPN+
Sbjct: 44 KIGAGSFGTVHRAEWHGSD-------VAVKILMEQDFHAERVNEFLREVAIMKRLRHPNI 96
Query: 137 VKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLF-SRAQPTLPWKTRLEIILGAAEGLAY 195
V +G + I V EY+ SL L S A+ L + RL + A+G+ Y
Sbjct: 97 VLFMGAVTQPPNLSI----VTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNY 152
Query: 196 LHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPE 255
LH +++RD K+ N+L+D + K+ DFGL+R S GT + APE
Sbjct: 153 LHNR-NPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRL--KASXFLXSKXAAGTPEWMAPE 209
Query: 256 YIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKFSMMID 315
+ +SD++SFGV+L+E+ T ++ P + A G K +
Sbjct: 210 VLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPA---------QVVAAVGFKCKRLEI 260
Query: 316 PRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQES 362
PR N +VA + + C P +RP+ +++ L+ ++ +
Sbjct: 261 PR-------NLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSA 300
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 123/273 (45%), Gaps = 36/273 (13%)
Query: 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVK 138
++G G FG V+ G +G + VAVK L G +LAE + + H LV+
Sbjct: 22 RLGAGQFGEVWMGY---YNGHTK---VAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVR 74
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHE 198
L + E ++ EYM N SL D L + + L L++ AEG+A++ E
Sbjct: 75 LYAVVTQE-----PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 129
Query: 199 GLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIE 258
I+RD + +N+L+ K++DFGLAR + T A + APE I
Sbjct: 130 R---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI-KWTAPEAIN 185
Query: 259 TGHLKSQSDIWSFGVVLYEILTGRRVLE--RNRPTMEQKLLEWVKQFPADGKKFSMMIDP 316
G +SD+WSFG++L EI+T R+ P + Q L ++ M+ P
Sbjct: 186 YGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL-----------ERGYRMVRP 234
Query: 317 RLRNQYSINAARRVAKLADNCLKKNPEERPTMN 349
N + +L C K+ PE+RPT +
Sbjct: 235 D-------NCPEELYQLMRLCWKERPEDRPTFD 260
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 126/285 (44%), Gaps = 32/285 (11%)
Query: 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVK 138
K+G G +G VY+G + L VAVK L ++ +++L E + + HPNLV+
Sbjct: 25 KLGGGQYGEVYEGVWKKYS-----LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQ 78
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHE 198
LLG C+ E I + E+M +L D L + + L + + + YL +
Sbjct: 79 LLGVCTREPPFYI----ITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK 134
Query: 199 GLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIE 258
I+RD N L+ N K++DFGL+R TGD + APE +
Sbjct: 135 K---NFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTXTAHAGAKFPIKWTAPESLA 190
Query: 259 TGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPA-DGKKFSMMIDPR 317
+SD+W+FGV+L+EI T + +P D + +++
Sbjct: 191 YNKFSIKSDVWAFGVLLWEIATYG-----------------MSPYPGIDLSQVYELLEKD 233
Query: 318 LRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQES 362
R + +V +L C + NP +RP+ ++ ++ + QES
Sbjct: 234 YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 278
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 126/285 (44%), Gaps = 32/285 (11%)
Query: 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVK 138
K+G G +G VY+G + L VAVK L ++ +++L E + + HPNLV+
Sbjct: 20 KLGGGQYGEVYEGVWKKYS-----LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQ 73
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHE 198
LLG C+ E I + E+M +L D L + + L + + + YL +
Sbjct: 74 LLGVCTREPPFYI----IIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK 129
Query: 199 GLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIE 258
I+RD N L+ N K++DFGL+R TGD + APE +
Sbjct: 130 K---NFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLA 185
Query: 259 TGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPA-DGKKFSMMIDPR 317
+SD+W+FGV+L+EI T + +P D + +++
Sbjct: 186 YNKFSIKSDVWAFGVLLWEIATYG-----------------MSPYPGIDLSQVYELLEKD 228
Query: 318 LRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQES 362
R + +V +L C + NP +RP+ ++ ++ + QES
Sbjct: 229 YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 273
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 123/273 (45%), Gaps = 36/273 (13%)
Query: 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVK 138
++G G FG V+ G +G + VAVK L G +LAE + + H LV+
Sbjct: 20 RLGAGQFGEVWMGY---YNGHTK---VAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVR 72
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHE 198
L + E ++ EYM N SL D L + + L L++ AEG+A++ E
Sbjct: 73 LYAVVTQE-----PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 127
Query: 199 GLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIE 258
I+RD + +N+L+ K++DFGLAR + T A + APE I
Sbjct: 128 R---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI-KWTAPEAIN 183
Query: 259 TGHLKSQSDIWSFGVVLYEILTGRRVLE--RNRPTMEQKLLEWVKQFPADGKKFSMMIDP 316
G +SD+WSFG++L EI+T R+ P + Q L ++ M+ P
Sbjct: 184 YGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL-----------ERGYRMVRP 232
Query: 317 RLRNQYSINAARRVAKLADNCLKKNPEERPTMN 349
N + +L C K+ PE+RPT +
Sbjct: 233 D-------NCPEELYQLMRLCWKERPEDRPTFD 258
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 126/285 (44%), Gaps = 32/285 (11%)
Query: 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVK 138
K+G G +G VY+G + L VAVK L ++ +++L E + + HPNLV+
Sbjct: 20 KLGGGQYGEVYEGVWKKYS-----LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQ 73
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHE 198
LLG C+ E I + E+M +L D L + + L + + + YL +
Sbjct: 74 LLGVCTREPPFYI----IIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK 129
Query: 199 GLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIE 258
I+RD N L+ N K++DFGL+R TGD + APE +
Sbjct: 130 K---NFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTYTAHAGAKFPIKWTAPESLA 185
Query: 259 TGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPA-DGKKFSMMIDPR 317
+SD+W+FGV+L+EI T + +P D + +++
Sbjct: 186 YNKFSIKSDVWAFGVLLWEIATYG-----------------MSPYPGIDLSQVYELLEKD 228
Query: 318 LRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQES 362
R + +V +L C + NP +RP+ ++ ++ + QES
Sbjct: 229 YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 273
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 126/285 (44%), Gaps = 32/285 (11%)
Query: 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVK 138
K+G G +G VY+G + L VAVK L ++ +++L E + + HPNLV+
Sbjct: 25 KLGGGQYGEVYEGVWKKYS-----LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQ 78
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHE 198
LLG C+ E I + E+M +L D L + + L + + + YL +
Sbjct: 79 LLGVCTREPPFYI----ITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK 134
Query: 199 GLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIE 258
I+RD N L+ N K++DFGL+R TGD + APE +
Sbjct: 135 K---NFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLA 190
Query: 259 TGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPA-DGKKFSMMIDPR 317
+SD+W+FGV+L+EI T + +P D + +++
Sbjct: 191 YNKFSIKSDVWAFGVLLWEIATYG-----------------MSPYPGIDLSQVYELLEKD 233
Query: 318 LRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQES 362
R + +V +L C + NP +RP+ ++ ++ + QES
Sbjct: 234 YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 278
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 126/285 (44%), Gaps = 32/285 (11%)
Query: 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVK 138
K+G G +G VY+G + L VAVK L ++ +++L E + + HPNLV+
Sbjct: 20 KLGGGQYGEVYEGVWKKYS-----LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQ 73
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHE 198
LLG C+ E I + E+M +L D L + + L + + + YL +
Sbjct: 74 LLGVCTREPPFYI----ITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK 129
Query: 199 GLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIE 258
I+RD N L+ N K++DFGL+R TGD + APE +
Sbjct: 130 K---NFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTYTAHAGAKFPIKWTAPESLA 185
Query: 259 TGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPA-DGKKFSMMIDPR 317
+SD+W+FGV+L+EI T + +P D + +++
Sbjct: 186 YNKFSIKSDVWAFGVLLWEIATYG-----------------MSPYPGIDLSQVYELLEKD 228
Query: 318 LRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQES 362
R + +V +L C + NP +RP+ ++ ++ + QES
Sbjct: 229 YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 273
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 126/285 (44%), Gaps = 32/285 (11%)
Query: 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVK 138
K+G G +G VY+G + L VAVK L ++ +++L E + + HPNLV+
Sbjct: 20 KLGGGQYGEVYEGVWKKYS-----LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQ 73
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHE 198
LLG C+ E I + E+M +L D L + + L + + + YL +
Sbjct: 74 LLGVCTREPPFYI----ITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK 129
Query: 199 GLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIE 258
I+RD N L+ N K++DFGL+R TGD + APE +
Sbjct: 130 K---NFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLA 185
Query: 259 TGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPA-DGKKFSMMIDPR 317
+SD+W+FGV+L+EI T + +P D + +++
Sbjct: 186 YNKFSIKSDVWAFGVLLWEIATYG-----------------MSPYPGIDLSQVYELLEKD 228
Query: 318 LRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQES 362
R + +V +L C + NP +RP+ ++ ++ + QES
Sbjct: 229 YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 273
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 141/301 (46%), Gaps = 48/301 (15%)
Query: 70 ATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKL---NNHG----LQGHKQWL 122
A N +IG+GGFG V+KG + + VVA+K L ++ G ++ +++
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRL-----VKDKSVVAIKSLILGDSEGETEMIEKFQEFQ 71
Query: 123 AEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTR 182
EV + ++HPN+VKL G +V E++P L RL +A P + W +
Sbjct: 72 REVFIMSNLNHPNIVKLYGLMHNPPR------MVMEFVPCGDLYHRLLDKAHP-IKWSVK 124
Query: 183 LEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLL-----DGNFKPKLSDFGLAREGPTGD 237
L ++L A G+ Y+ + +++RD ++ N+ L + K++DFG +++
Sbjct: 125 LRLMLDIALGIEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQS---- 179
Query: 238 HTHVSTAVVGTYGYAAPEYI--ETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQK 295
H + ++G + + APE I E ++D +SF ++LY ILTG +
Sbjct: 180 -VHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD--------- 229
Query: 296 LLEWVKQFPADGKKFSMMI-DPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVES 354
++ KF MI + LR + R+ + + C +P++RP + +V+
Sbjct: 230 ------EYSYGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKE 283
Query: 355 L 355
L
Sbjct: 284 L 284
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 141/301 (46%), Gaps = 48/301 (15%)
Query: 70 ATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKL---NNHG----LQGHKQWL 122
A N +IG+GGFG V+KG + + VVA+K L ++ G ++ +++
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRL-----VKDKSVVAIKSLILGDSEGETEMIEKFQEFQ 71
Query: 123 AEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTR 182
EV + ++HPN+VKL G +V E++P L RL +A P + W +
Sbjct: 72 REVFIMSNLNHPNIVKLYGLMHNPPR------MVMEFVPCGDLYHRLLDKAHP-IKWSVK 124
Query: 183 LEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLL-----DGNFKPKLSDFGLAREGPTGD 237
L ++L A G+ Y+ + +++RD ++ N+ L + K++DF L+++
Sbjct: 125 LRLMLDIALGIEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQS---- 179
Query: 238 HTHVSTAVVGTYGYAAPEYI--ETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQK 295
H + ++G + + APE I E ++D +SF ++LY ILTG +
Sbjct: 180 -VHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD--------- 229
Query: 296 LLEWVKQFPADGKKFSMMI-DPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVES 354
++ KF MI + LR + R+ + + C +P++RP + +V+
Sbjct: 230 ------EYSYGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKE 283
Query: 355 L 355
L
Sbjct: 284 L 284
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 93/349 (26%), Positives = 150/349 (42%), Gaps = 73/349 (20%)
Query: 34 ALNRTARSLPSPRSIPELYKEKEHHLRVFDMQELREATNGFNRMLKIGEGGFGSVYKGTI 93
ALNR ++ P P P V D +++ F + IGEG FG V K I
Sbjct: 2 ALNRKVKNNPDPTIYP-----------VLDWNDIK-----FQDV--IGEGNFGQVLKARI 43
Query: 94 RPLDGRGEPLVVAVKKLNNHGLQG-HKQWLAEVQFLGVVSH-PNLVKLLGYCSTEDERGI 151
+ G + A+K++ + + H+ + E++ L + H PN++ LLG C + RG
Sbjct: 44 KK---DGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGAC---EHRGY 97
Query: 152 QRLLVYEYMPNRSLEDRL-----------FSRAQPT---LPWKTRLEIILGAAEGLAYLH 197
L + EY P+ +L D L F+ A T L + L A G+ YL
Sbjct: 98 LYLAI-EYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS 156
Query: 198 EGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYG-----YA 252
+ Q I+R+ N+L+ N+ K++DFGL+R G +V T G +
Sbjct: 157 QK---QFIHRNLAARNILVGENYVAKIADFGLSR----GQEVYVKK----TMGRLPVRWM 205
Query: 253 APEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKFSM 312
A E + + SD+WS+GV+L+EI++ P E ++ P
Sbjct: 206 AIESLNYSVYTTNSDVWSYGVLLWEIVS-----LGGTPYCGMTCAELYEKLPQG------ 254
Query: 313 MIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQE 361
R + +N V L C ++ P ERP+ Q++ SL ++E
Sbjct: 255 -----YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEE 298
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 126/285 (44%), Gaps = 32/285 (11%)
Query: 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVK 138
K+G G +G VY+G + L VAVK L ++ +++L E + + HPNLV+
Sbjct: 24 KLGGGQYGEVYEGVWKKYS-----LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQ 77
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHE 198
LLG C+ E I + E+M +L D L + + L + + + YL +
Sbjct: 78 LLGVCTREPPFYI----ITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK 133
Query: 199 GLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIE 258
I+RD N L+ N K++DFGL+R TGD + APE +
Sbjct: 134 K---NFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLA 189
Query: 259 TGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPA-DGKKFSMMIDPR 317
+SD+W+FGV+L+EI T + +P D + +++
Sbjct: 190 YNKFSIKSDVWAFGVLLWEIATYG-----------------MSPYPGIDLSQVYELLEKD 232
Query: 318 LRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQES 362
R + +V +L C + NP +RP+ ++ ++ + QES
Sbjct: 233 YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 277
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 126/285 (44%), Gaps = 32/285 (11%)
Query: 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVK 138
K+G G +G VY+G + L VAVK L ++ +++L E + + HPNLV+
Sbjct: 21 KLGGGQYGEVYEGVWKKYS-----LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQ 74
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHE 198
LLG C+ E I + E+M +L D L + + L + + + YL +
Sbjct: 75 LLGVCTREPPFYI----ITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK 130
Query: 199 GLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIE 258
I+RD N L+ N K++DFGL+R TGD + APE +
Sbjct: 131 K---NFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAPAGAKFPIKWTAPESLA 186
Query: 259 TGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPA-DGKKFSMMIDPR 317
+SD+W+FGV+L+EI T + +P D + +++
Sbjct: 187 YNKFSIKSDVWAFGVLLWEIATYG-----------------MSPYPGIDLSQVYELLEKD 229
Query: 318 LRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQES 362
R + +V +L C + NP +RP+ ++ ++ + QES
Sbjct: 230 YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 274
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 144/320 (45%), Gaps = 37/320 (11%)
Query: 42 LPSPRSI--PELYKEKEHHLRVFDMQELREATNGFNRMLKIGEGGFGSVYKGTIRPLDGR 99
LP R+ P Y++ + F +EL +++ +G G FG V G ++ L +
Sbjct: 16 LPGLRTFVDPHTYEDPTQTVHEF-AKELDATNISIDKV--VGAGEFGEVCSGRLK-LPSK 71
Query: 100 GEPLVVAVKKLN-NHGLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYE 158
E + VA+K L + + + +L E +G HPN+++L G + + ++V E
Sbjct: 72 KE-ISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVT----KSKPVMIVTE 126
Query: 159 YMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDG 218
YM N SL D + + ++ G A G+ YL + + ++RD N+L++
Sbjct: 127 YMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLAARNILINS 182
Query: 219 NFKPKLSDFGLAR---EGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVL 275
N K+SDFGL+R + P +T + + +PE I S SD+WS+G+VL
Sbjct: 183 NLVCKVSDFGLSRVLEDDPEAAYTTRGGKI--PIRWTSPEAIAYRKFTSASDVWSYGIVL 240
Query: 276 YEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLAD 335
+E+++ RP E + +K +D R ++ + +L
Sbjct: 241 WEVMS-----YGERPYWEMSNQDVIKA-----------VDEGYRLPPPMDCPAALYQLML 284
Query: 336 NCLKKNPEERPTMNQVVESL 355
+C +K+ RP Q+V L
Sbjct: 285 DCWQKDRNNRPKFEQIVSIL 304
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 126/285 (44%), Gaps = 32/285 (11%)
Query: 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVK 138
K+G G +G VY+G + L VAVK L ++ +++L E + + HPNLV+
Sbjct: 20 KLGGGQYGEVYEGVWKKYS-----LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQ 73
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHE 198
LLG C+ E I + E+M +L D L + + L + + + YL +
Sbjct: 74 LLGVCTREPPFYI----ITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK 129
Query: 199 GLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIE 258
I+RD N L+ N K++DFGL+R TGD + APE +
Sbjct: 130 K---NFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLA 185
Query: 259 TGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPA-DGKKFSMMIDPR 317
+SD+W+FGV+L+EI T + +P D + +++
Sbjct: 186 YNKFSIKSDVWAFGVLLWEIATYG-----------------MSPYPGIDLSQVYELLEKD 228
Query: 318 LRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQES 362
R + +V +L C + NP +RP+ ++ ++ + QES
Sbjct: 229 YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 273
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 146/319 (45%), Gaps = 35/319 (10%)
Query: 42 LPSPRSIPELYKEKEHHLRVFDMQELREATN-GFNRMLKIGEGGFGSVYKGTIRPLDGRG 100
LP R+ + + ++ V + + +ATN +++ +G G FG V G ++ L +
Sbjct: 16 LPGLRTFVDPHTFEDPTQTVHEFAKELDATNISIDKV--VGAGEFGEVCSGRLK-LPSKK 72
Query: 101 EPLVVAVKKLN-NHGLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEY 159
E + VA+K L + + + +L E +G HPN+++L G + + ++V EY
Sbjct: 73 E-ISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVT----KSKPVMIVTEY 127
Query: 160 MPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGN 219
M N SL D + + ++ G A G+ YL + + ++RD N+L++ N
Sbjct: 128 MENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLAARNILINSN 183
Query: 220 FKPKLSDFGLAR---EGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLY 276
K+SDFGLAR + P +T + + +PE I S SD+WS+G+VL+
Sbjct: 184 LVCKVSDFGLARVLEDDPEAAYTTRGGKI--PIRWTSPEAIAYRKFTSASDVWSYGIVLW 241
Query: 277 EILTGRRVLERNRPTMEQKLLEWVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADN 336
E+++ RP E + +K +D R ++ + +L +
Sbjct: 242 EVMS-----YGERPYWEMSNQDVIKA-----------VDEGYRLPPPMDCPAALYQLMLD 285
Query: 337 CLKKNPEERPTMNQVVESL 355
C +K+ RP Q+V L
Sbjct: 286 CWQKDRNNRPKFEQIVSIL 304
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 126/285 (44%), Gaps = 32/285 (11%)
Query: 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVK 138
K+G G +G VY+G + L VAVK L ++ +++L E + + HPNLV+
Sbjct: 22 KLGGGQYGEVYEGVWKKYS-----LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQ 75
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHE 198
LLG C+ E I + E+M +L D L + + L + + + YL +
Sbjct: 76 LLGVCTREPPFYI----ITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK 131
Query: 199 GLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIE 258
I+RD N L+ N K++DFGL+R TGD + APE +
Sbjct: 132 K---NFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLA 187
Query: 259 TGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPA-DGKKFSMMIDPR 317
+SD+W+FGV+L+EI T + +P D + +++
Sbjct: 188 YNKFSIKSDVWAFGVLLWEIATYG-----------------MSPYPGIDLSQVYELLEKD 230
Query: 318 LRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQES 362
R + +V +L C + NP +RP+ ++ ++ + QES
Sbjct: 231 YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 275
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 126/285 (44%), Gaps = 32/285 (11%)
Query: 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVK 138
K+G G +G VY+G + L VAVK L ++ +++L E + + HPNLV+
Sbjct: 22 KLGGGQYGEVYEGVWKKYS-----LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQ 75
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHE 198
LLG C+ E I + E+M +L D L + + L + + + YL +
Sbjct: 76 LLGVCTREPPFYI----ITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK 131
Query: 199 GLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIE 258
I+RD N L+ N K++DFGL+R TGD + APE +
Sbjct: 132 K---NFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLA 187
Query: 259 TGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPA-DGKKFSMMIDPR 317
+SD+W+FGV+L+EI T + +P D + +++
Sbjct: 188 YNKFSIKSDVWAFGVLLWEIATYG-----------------MSPYPGIDLSQVYELLEKD 230
Query: 318 LRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQES 362
R + +V +L C + NP +RP+ ++ ++ + QES
Sbjct: 231 YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 275
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 110/223 (49%), Gaps = 18/223 (8%)
Query: 59 LRVFDMQELREATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKL-NNHGLQG 117
LR+ ELR+ +G G FG+VYKG P DG + VA+K L N +
Sbjct: 11 LRILKETELRKVK-------VLGSGAFGTVYKGIWIP-DGENVKIPVAIKVLRENTSPKA 62
Query: 118 HKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTL 177
+K+ L E + V P + +LLG C T + + +L+ Y + + E+R +Q L
Sbjct: 63 NKEILDEAYVMAGVGSPYVSRLLGICLTSTVQLVTQLMPYGCLLDHVRENRGRLGSQDLL 122
Query: 178 PWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGD 237
W ++ A+G++YL ++++++RD NVL+ K++DFGLAR +
Sbjct: 123 NWCMQI------AKGMSYLE---DVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDE 173
Query: 238 HTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILT 280
+ + + A E I QSD+WS+GV ++E++T
Sbjct: 174 TEYHADGGKVPIKWMALESILRRRFTHQSDVWSYGVTVWELMT 216
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 126/285 (44%), Gaps = 32/285 (11%)
Query: 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVK 138
K+G G +G VY+G + L VAVK L ++ +++L E + + HPNLV+
Sbjct: 22 KLGGGQYGEVYEGVWKKYS-----LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQ 75
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHE 198
LLG C+ E I + E+M +L D L + + L + + + YL +
Sbjct: 76 LLGVCTREPPFYI----ITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK 131
Query: 199 GLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIE 258
I+RD N L+ N K++DFGL+R TGD + APE +
Sbjct: 132 K---NFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAPAGAKFPIKWTAPESLA 187
Query: 259 TGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPA-DGKKFSMMIDPR 317
+SD+W+FGV+L+EI T + +P D + +++
Sbjct: 188 YNKFSIKSDVWAFGVLLWEIATYG-----------------MSPYPGIDLSQVYELLEKD 230
Query: 318 LRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQES 362
R + +V +L C + NP +RP+ ++ ++ + QES
Sbjct: 231 YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 275
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 126/285 (44%), Gaps = 32/285 (11%)
Query: 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVK 138
K+G G +G VY+G + L VAVK L ++ +++L E + + HPNLV+
Sbjct: 33 KLGGGQYGEVYEGVWKKYS-----LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQ 86
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHE 198
LLG C+ E I + E+M +L D L + + L + + + YL +
Sbjct: 87 LLGVCTREPPFYI----ITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK 142
Query: 199 GLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIE 258
I+RD N L+ N K++DFGL+R TGD + APE +
Sbjct: 143 K---NFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLA 198
Query: 259 TGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPA-DGKKFSMMIDPR 317
+SD+W+FGV+L+EI T + +P D + +++
Sbjct: 199 YNKFSIKSDVWAFGVLLWEIATYG-----------------MSPYPGIDLSQVYELLEKD 241
Query: 318 LRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQES 362
R + +V +L C + NP +RP+ ++ ++ + QES
Sbjct: 242 YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 286
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 126/285 (44%), Gaps = 32/285 (11%)
Query: 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVK 138
K+G G +G VY+G + L VAVK L ++ +++L E + + HPNLV+
Sbjct: 25 KLGGGQYGEVYEGVWKKYS-----LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQ 78
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHE 198
LLG C+ E I + E+M +L D L + + L + + + YL +
Sbjct: 79 LLGVCTREPPFYI----ITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK 134
Query: 199 GLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIE 258
I+RD N L+ N K++DFGL+R TGD + APE +
Sbjct: 135 K---NFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLA 190
Query: 259 TGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPA-DGKKFSMMIDPR 317
+SD+W+FGV+L+EI T + +P D + +++
Sbjct: 191 YNKFSIKSDVWAFGVLLWEIATYG-----------------MSPYPGIDLSQVYELLEKD 233
Query: 318 LRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQES 362
R + +V +L C + NP +RP+ ++ ++ + QES
Sbjct: 234 YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 278
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 124/273 (45%), Gaps = 36/273 (13%)
Query: 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVK 138
++G G FG V+ G +G + VAVK L G +LAE + + H LV+
Sbjct: 16 RLGAGQFGEVWMGY---YNGHTK---VAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVR 68
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHE 198
L + E ++ EYM N SL D L + + L L++ AEG+A++ E
Sbjct: 69 LYAVVTQE-----PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 123
Query: 199 GLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIE 258
I+R+ + +N+L+ K++DFGLAR ++T A + APE I
Sbjct: 124 R---NYIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPI-KWTAPEAIN 179
Query: 259 TGHLKSQSDIWSFGVVLYEILTGRRVLE--RNRPTMEQKLLEWVKQFPADGKKFSMMIDP 316
G +SD+WSFG++L EI+T R+ P + Q L ++ M+ P
Sbjct: 180 YGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL-----------ERGYRMVRP 228
Query: 317 RLRNQYSINAARRVAKLADNCLKKNPEERPTMN 349
N + +L C K+ PE+RPT +
Sbjct: 229 D-------NCPEELYQLMRLCWKERPEDRPTFD 254
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 132/287 (45%), Gaps = 33/287 (11%)
Query: 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHK--QWLAEVQFLGVVSHPNL 136
KIG G FG+V++ D VAVK L + ++L EV + + HPN+
Sbjct: 44 KIGAGSFGTVHRAEWHGSD-------VAVKILMEQDFHAERVNEFLREVAIMKRLRHPNI 96
Query: 137 VKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLF-SRAQPTLPWKTRLEIILGAAEGLAY 195
V +G + I V EY+ SL L S A+ L + RL + A+G+ Y
Sbjct: 97 VLFMGAVTQPPNLSI----VTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNY 152
Query: 196 LHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPE 255
LH +++R+ K+ N+L+D + K+ DFGL+R + + S A GT + APE
Sbjct: 153 LHNR-NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAA--GTPEWMAPE 209
Query: 256 YIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKFSMMID 315
+ +SD++SFGV+L+E+ T ++ P + A G K +
Sbjct: 210 VLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPA---------QVVAAVGFKCKRLEI 260
Query: 316 PRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQES 362
PR N +VA + + C P +RP+ +++ L+ ++ +
Sbjct: 261 PR-------NLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSA 300
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 134/303 (44%), Gaps = 55/303 (18%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQG-HKQWLAEVQFLGVVSH-PNLV 137
IGEG FG V K I+ G + A+K++ + + H+ + E++ L + H PN++
Sbjct: 33 IGEGNFGQVLKARIKK---DGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 89
Query: 138 KLLGYCSTEDERGIQRLLVYEYMPNRSLEDRL-----------FSRAQPT---LPWKTRL 183
LLG C + RG L + EY P+ +L D L F+ A T L + L
Sbjct: 90 NLLGAC---EHRGYLYLAI-EYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLL 145
Query: 184 EIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVST 243
A G+ YL + Q I+RD N+L+ N+ K++DFGL+R G +V
Sbjct: 146 HFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFGLSR----GQEVYVKK 198
Query: 244 AVVGTYG-----YAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLE 298
T G + A E + + SD+WS+GV+L+EI++ P E
Sbjct: 199 ----TMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS-----LGGTPYCGMTCAE 249
Query: 299 WVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLA 358
++ P R + +N V L C ++ P ERP+ Q++ SL
Sbjct: 250 LYEKLPQG-----------YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRM 298
Query: 359 VQE 361
++E
Sbjct: 299 LEE 301
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 134/303 (44%), Gaps = 55/303 (18%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQG-HKQWLAEVQFLGVVSH-PNLV 137
IGEG FG V K I+ G + A+K++ + + H+ + E++ L + H PN++
Sbjct: 23 IGEGNFGQVLKARIKK---DGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 79
Query: 138 KLLGYCSTEDERGIQRLLVYEYMPNRSLEDRL-----------FSRAQPT---LPWKTRL 183
LLG C + RG L + EY P+ +L D L F+ A T L + L
Sbjct: 80 NLLGAC---EHRGYLYLAI-EYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLL 135
Query: 184 EIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVST 243
A G+ YL + Q I+RD N+L+ N+ K++DFGL+R G +V
Sbjct: 136 HFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFGLSR----GQEVYVKK 188
Query: 244 AVVGTYG-----YAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLE 298
T G + A E + + SD+WS+GV+L+EI++ P E
Sbjct: 189 ----TMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS-----LGGTPYCGMTCAE 239
Query: 299 WVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLA 358
++ P R + +N V L C ++ P ERP+ Q++ SL
Sbjct: 240 LYEKLPQG-----------YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRM 288
Query: 359 VQE 361
++E
Sbjct: 289 LEE 291
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 144/320 (45%), Gaps = 37/320 (11%)
Query: 42 LPSPRSI--PELYKEKEHHLRVFDMQELREATNGFNRMLKIGEGGFGSVYKGTIRPLDGR 99
LP R+ P Y++ + F +EL +++ +G G FG V G ++ L +
Sbjct: 16 LPGLRTYVDPHTYEDPTQTVHEF-AKELDATNISIDKV--VGAGEFGEVCSGRLK-LPSK 71
Query: 100 GEPLVVAVKKLN-NHGLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYE 158
E + VA+K L + + + +L E +G HPN+++L G + + ++V E
Sbjct: 72 KE-ISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVT----KSKPVMIVTE 126
Query: 159 YMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDG 218
YM N SL D + + ++ G A G+ YL + + ++RD N+L++
Sbjct: 127 YMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLAARNILINS 182
Query: 219 NFKPKLSDFGLAR---EGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVL 275
N K+SDFGL+R + P +T + + +PE I S SD+WS+G+VL
Sbjct: 183 NLVCKVSDFGLSRVLEDDPEAAYTTRGGKI--PIRWTSPEAIAYRKFTSASDVWSYGIVL 240
Query: 276 YEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLAD 335
+E+++ RP E + +K +D R ++ + +L
Sbjct: 241 WEVMS-----YGERPYWEMSNQDVIKA-----------VDEGYRLPPPMDCPAALYQLML 284
Query: 336 NCLKKNPEERPTMNQVVESL 355
+C +K+ RP Q+V L
Sbjct: 285 DCWQKDRNNRPKFEQIVSIL 304
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 146/319 (45%), Gaps = 35/319 (10%)
Query: 42 LPSPRSIPELYKEKEHHLRVFDMQELREATN-GFNRMLKIGEGGFGSVYKGTIRPLDGRG 100
LP R+ + + ++ V + + +ATN +++ +G G FG V G ++ L +
Sbjct: 16 LPGLRTFVDPHTFEDPTQTVHEFAKELDATNISIDKV--VGAGEFGEVCSGRLK-LPSKK 72
Query: 101 EPLVVAVKKLN-NHGLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEY 159
E + VA+K L + + + +L E +G HPN+++L G + + ++V EY
Sbjct: 73 E-ISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVT----KSKPVMIVTEY 127
Query: 160 MPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGN 219
M N SL D + + ++ G A G+ YL + + ++RD N+L++ N
Sbjct: 128 MENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD---MGFVHRDLAARNILINSN 183
Query: 220 FKPKLSDFGLAR---EGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLY 276
K+SDFGL+R + P +T + + +PE I S SD+WS+G+VL+
Sbjct: 184 LVCKVSDFGLSRVLEDDPEAAYTTRGGKI--PIRWTSPEAIAYRKFTSASDVWSYGIVLW 241
Query: 277 EILTGRRVLERNRPTMEQKLLEWVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADN 336
E+++ RP E + +K +D R ++ + +L +
Sbjct: 242 EVMS-----YGERPYWEMSNQDVIKA-----------VDEGYRLPPPMDCPAALYQLMLD 285
Query: 337 CLKKNPEERPTMNQVVESL 355
C +K+ RP Q+V L
Sbjct: 286 CWQKDRNNRPKFEQIVSIL 304
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 144/320 (45%), Gaps = 37/320 (11%)
Query: 42 LPSPRSI--PELYKEKEHHLRVFDMQELREATNGFNRMLKIGEGGFGSVYKGTIRPLDGR 99
LP R+ P Y++ + F +EL +++ +G G FG V G ++ L +
Sbjct: 14 LPGLRTYVDPHTYEDPTQTVHEF-AKELDATNISIDKV--VGAGEFGEVCSGRLK-LPSK 69
Query: 100 GEPLVVAVKKLN-NHGLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYE 158
E + VA+K L + + + +L E +G HPN+++L G + + ++V E
Sbjct: 70 KE-ISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVT----KSKPVMIVTE 124
Query: 159 YMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDG 218
YM N SL D + + ++ G A G+ YL + + ++RD N+L++
Sbjct: 125 YMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLAARNILINS 180
Query: 219 NFKPKLSDFGLAR---EGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVL 275
N K+SDFGL+R + P +T + + +PE I S SD+WS+G+VL
Sbjct: 181 NLVCKVSDFGLSRVLEDDPEAAYTTRGGKI--PIRWTSPEAIAYRKFTSASDVWSYGIVL 238
Query: 276 YEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLAD 335
+E+++ RP E + +K +D R ++ + +L
Sbjct: 239 WEVMS-----YGERPYWEMSNQDVIKA-----------VDEGYRLPPPMDCPAALYQLML 282
Query: 336 NCLKKNPEERPTMNQVVESL 355
+C +K+ RP Q+V L
Sbjct: 283 DCWQKDRNNRPKFEQIVSIL 302
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 146/319 (45%), Gaps = 35/319 (10%)
Query: 42 LPSPRSIPELYKEKEHHLRVFDMQELREATN-GFNRMLKIGEGGFGSVYKGTIRPLDGRG 100
LP R+ + + ++ V + + +ATN +++ +G G FG V G ++ L +
Sbjct: 16 LPGLRTFVDPHTFEDPTQTVHEFAKELDATNISIDKV--VGAGEFGEVCSGRLK-LPSKK 72
Query: 101 EPLVVAVKKLN-NHGLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEY 159
E + VA+K L + + + +L E +G HPN+++L G + + ++V EY
Sbjct: 73 E-ISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVT----KSKPVMIVTEY 127
Query: 160 MPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGN 219
M N SL D + + ++ G A G+ YL + + ++RD N+L++ N
Sbjct: 128 MENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLAARNILINSN 183
Query: 220 FKPKLSDFGLAR---EGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLY 276
K+SDFGL+R + P +T + + +PE I S SD+WS+G+VL+
Sbjct: 184 LVCKVSDFGLSRVLEDDPEAAYTTRGGKI--PIRWTSPEAIAYRKFTSASDVWSYGIVLW 241
Query: 277 EILTGRRVLERNRPTMEQKLLEWVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADN 336
E+++ RP E + +K +D R ++ + +L +
Sbjct: 242 EVMS-----YGERPYWEMSNQDVIKA-----------VDEGYRLPPPMDCPAALYQLMLD 285
Query: 337 CLKKNPEERPTMNQVVESL 355
C +K+ RP Q+V L
Sbjct: 286 CWQKDRNNRPKFEQIVSIL 304
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 125/284 (44%), Gaps = 32/284 (11%)
Query: 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVK 138
K+G G +G VY+G + L VAVK L ++ +++L E + + HPNLV+
Sbjct: 25 KLGGGQYGEVYEGVWKKYS-----LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQ 78
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHE 198
LLG C+ E I + E+M +L D L + + L + + + YL +
Sbjct: 79 LLGVCTREPPFYI----IIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK 134
Query: 199 GLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIE 258
I+RD N L+ N K++DFGL+R TGD + APE +
Sbjct: 135 K---NFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLA 190
Query: 259 TGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPA-DGKKFSMMIDPR 317
+SD+W+FGV+L+EI T + +P D + +++
Sbjct: 191 YNKFSIKSDVWAFGVLLWEIATYG-----------------MSPYPGIDLSQVYELLEKD 233
Query: 318 LRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQE 361
R + +V +L C + NP +RP+ ++ ++ + QE
Sbjct: 234 YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE 277
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 125/284 (44%), Gaps = 32/284 (11%)
Query: 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVK 138
K+G G +G VY+G + L VAVK L ++ +++L E + + HPNLV+
Sbjct: 25 KLGGGQYGEVYEGVWKKYS-----LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQ 78
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHE 198
LLG C+ E I + E+M +L D L + + L + + + YL +
Sbjct: 79 LLGVCTREPPFYI----ITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK 134
Query: 199 GLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIE 258
I+RD N L+ N K++DFGL+R TGD + APE +
Sbjct: 135 K---NFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLA 190
Query: 259 TGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPA-DGKKFSMMIDPR 317
+SD+W+FGV+L+EI T + +P D + +++
Sbjct: 191 YNKFSIKSDVWAFGVLLWEIATYG-----------------MSPYPGIDLSQVYELLEKD 233
Query: 318 LRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQE 361
R + +V +L C + NP +RP+ ++ ++ + QE
Sbjct: 234 YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE 277
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 128/280 (45%), Gaps = 32/280 (11%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLN-NHGLQGHKQWLAEVQFLGVVSHPNLVK 138
+G G FG V G ++ L + E + VA+K L + + + +L E +G HPN+++
Sbjct: 53 VGAGEFGEVCSGRLK-LPSKKE-ISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHE 198
L G + + ++V EYM N SL D + + ++ G A G+ YL +
Sbjct: 111 LEGVVT----KSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD 165
Query: 199 GLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAR---EGPTGDHTHVSTAVVGTYGYAAPE 255
+ ++RD N+L++ N K+SDFGL+R + P +T + + +PE
Sbjct: 166 ---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI--PIRWTSPE 220
Query: 256 YIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKFSMMID 315
I S SD+WS+G+VL+E+++ RP E + +K +D
Sbjct: 221 AIAYRKFTSASDVWSYGIVLWEVMS-----YGERPYWEMSNQDVIKA-----------VD 264
Query: 316 PRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESL 355
R ++ + +L +C +K+ RP Q+V L
Sbjct: 265 EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 132/282 (46%), Gaps = 30/282 (10%)
Query: 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVK 138
+IG G FG+VYKG G+ + V + K+ + + + + EV L H N++
Sbjct: 43 RIGSGSFGTVYKG-----KWHGD-VAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILL 96
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHE 198
+GY T+D I V ++ SL L + + ++I A+G+ YLH
Sbjct: 97 FMGYM-TKDNLAI----VTQWCEGSSLYKHLHVQ-ETKFQMFQLIDIARQTAQGMDYLHA 150
Query: 199 GLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYI- 257
+I+RD K++N+ L K+ DFGLA + G+ + APE I
Sbjct: 151 K---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIR 207
Query: 258 --ETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKFSMMID 315
+ QSD++S+G+VLYE++TG L + +++ V G+ ++
Sbjct: 208 MQDNNPFSFQSDVYSYGIVLYELMTGE--LPYSHINNRDQIIFMV------GRGYA---S 256
Query: 316 PRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKL 357
P L Y N + + +L +C+KK EERP Q++ S++L
Sbjct: 257 PDLSKLYK-NCPKAMKRLVADCVKKVKEERPLFPQILSSIEL 297
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 128/280 (45%), Gaps = 32/280 (11%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLN-NHGLQGHKQWLAEVQFLGVVSHPNLVK 138
+G G FG V G ++ L + E + VA+K L + + + +L E +G HPN+++
Sbjct: 24 VGAGEFGEVCSGRLK-LPSKKE-ISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 81
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHE 198
L G + + ++V EYM N SL D + + ++ G A G+ YL +
Sbjct: 82 LEGVVT----KSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD 136
Query: 199 GLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAR---EGPTGDHTHVSTAVVGTYGYAAPE 255
+ ++RD N+L++ N K+SDFGL+R + P +T + + +PE
Sbjct: 137 ---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI--PIRWTSPE 191
Query: 256 YIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKFSMMID 315
I S SD+WS+G+VL+E+++ RP E + +K +D
Sbjct: 192 AIAYRKFTSASDVWSYGIVLWEVMS-----YGERPYWEMSNQDVIKA-----------VD 235
Query: 316 PRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESL 355
R ++ + +L +C +K+ RP Q+V L
Sbjct: 236 EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 275
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 126/285 (44%), Gaps = 32/285 (11%)
Query: 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVK 138
K+G G +G VY+G + L VAVK L ++ +++L E + + HPNLV+
Sbjct: 227 KLGGGQYGEVYEGVWKKYS-----LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQ 280
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHE 198
LLG C+ E I + E+M +L D L + + L + + + YL +
Sbjct: 281 LLGVCTREPPFYI----ITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK 336
Query: 199 GLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIE 258
I+R+ N L+ N K++DFGL+R TGD + APE +
Sbjct: 337 K---NFIHRNLAARNCLVGENHLVKVADFGLSRL-MTGDTYTAHAGAKFPIKWTAPESLA 392
Query: 259 TGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPA-DGKKFSMMIDPR 317
+SD+W+FGV+L+EI T + +P D + +++
Sbjct: 393 YNKFSIKSDVWAFGVLLWEIATYG-----------------MSPYPGIDLSQVYELLEKD 435
Query: 318 LRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQES 362
R + +V +L C + NP +RP+ ++ ++ + QES
Sbjct: 436 YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 480
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 128/280 (45%), Gaps = 32/280 (11%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLN-NHGLQGHKQWLAEVQFLGVVSHPNLVK 138
+G G FG V G ++ L + E + VA+K L + + + +L E +G HPN+++
Sbjct: 41 VGAGEFGEVCSGRLK-LPSKKE-ISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 98
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHE 198
L G + + ++V EYM N SL D + + ++ G A G+ YL +
Sbjct: 99 LEGVVT----KSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD 153
Query: 199 GLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAR---EGPTGDHTHVSTAVVGTYGYAAPE 255
+ ++RD N+L++ N K+SDFGL+R + P +T + + +PE
Sbjct: 154 ---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI--PIRWTSPE 208
Query: 256 YIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKFSMMID 315
I S SD+WS+G+VL+E+++ RP E + +K +D
Sbjct: 209 AIAYRKFTSASDVWSYGIVLWEVMS-----YGERPYWEMSNQDVIKA-----------VD 252
Query: 316 PRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESL 355
R ++ + +L +C +K+ RP Q+V L
Sbjct: 253 EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 292
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 145/319 (45%), Gaps = 35/319 (10%)
Query: 42 LPSPRSIPELYKEKEHHLRVFDMQELREATN-GFNRMLKIGEGGFGSVYKGTIRPLDGRG 100
LP R+ + + ++ V + + +ATN +++ +G G FG V G ++ L +
Sbjct: 16 LPGLRTFVDPHTFEDPTQTVHEFAKELDATNISIDKV--VGAGEFGEVCSGRLK-LPSKK 72
Query: 101 EPLVVAVKKLN-NHGLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEY 159
E + VA+K L + + + +L E +G HPN+++L G + + ++V EY
Sbjct: 73 E-ISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVT----KSKPVMIVTEY 127
Query: 160 MPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGN 219
M N SL D + + ++ G A G+ YL + + ++RD N+L++ N
Sbjct: 128 MENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLAARNILINSN 183
Query: 220 FKPKLSDFGLAR---EGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLY 276
K+SDFGL R + P +T + + +PE I S SD+WS+G+VL+
Sbjct: 184 LVCKVSDFGLGRVLEDDPEAAYTTRGGKI--PIRWTSPEAIAYRKFTSASDVWSYGIVLW 241
Query: 277 EILTGRRVLERNRPTMEQKLLEWVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADN 336
E+++ RP E + +K +D R ++ + +L +
Sbjct: 242 EVMS-----YGERPYWEMSNQDVIKA-----------VDEGYRLPPPMDCPAALYQLMLD 285
Query: 337 CLKKNPEERPTMNQVVESL 355
C +K+ RP Q+V L
Sbjct: 286 CWQKDRNNRPKFEQIVSIL 304
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 113/229 (49%), Gaps = 28/229 (12%)
Query: 58 HLRVFDMQELREATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLN-NHGLQ 116
LR+ EL+ R+ +G G FG+VYKG P +G + VA+K LN G +
Sbjct: 8 QLRILKETELK-------RVKVLGSGAFGTVYKGIWVP-EGETVKIPVAIKILNETTGPK 59
Query: 117 GHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSR---- 172
+ +++ E + + HP+LV+LLG C + IQ LV + MP+ L + +
Sbjct: 60 ANVEFMDEALIMASMDHPHLVRLLGVCLSPT---IQ--LVTQLMPHGCLLEYVHEHKDNI 114
Query: 173 -AQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAR 231
+Q L W ++ A+G+ YL E ++++RD NVL+ K++DFGLAR
Sbjct: 115 GSQLLLNWCVQI------AKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLAR 165
Query: 232 EGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILT 280
+ + + + A E I QSD+WS+GV ++E++T
Sbjct: 166 LLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMT 214
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 97/215 (45%), Gaps = 22/215 (10%)
Query: 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVK 138
++GEG FG V+ L + ++VAVK L + K + E + L + H ++VK
Sbjct: 20 ELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVK 79
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQ------------PT-LPWKTRLEI 185
G C D ++V+EYM + L F RA PT L L I
Sbjct: 80 FYGVCVEGDPL----IMVFEYMKHGDLNK--FLRAHGPDAVLMAEGNPPTELTQSQMLHI 133
Query: 186 ILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAV 245
A G+ YL ++RD T N L+ N K+ DFG++R+ + D+ V
Sbjct: 134 AQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHT 190
Query: 246 VGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILT 280
+ + PE I ++SD+WS GVVL+EI T
Sbjct: 191 MLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFT 225
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 126/285 (44%), Gaps = 32/285 (11%)
Query: 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVK 138
K+G G +G VY+G + L VAVK L ++ +++L E + + HPNLV+
Sbjct: 266 KLGGGQYGEVYEGVWKKYS-----LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQ 319
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHE 198
LLG C+ E I + E+M +L D L + + L + + + YL +
Sbjct: 320 LLGVCTREPPFYI----ITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK 375
Query: 199 GLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIE 258
I+R+ N L+ N K++DFGL+R TGD + APE +
Sbjct: 376 K---NFIHRNLAARNCLVGENHLVKVADFGLSRL-MTGDTYTAHAGAKFPIKWTAPESLA 431
Query: 259 TGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPA-DGKKFSMMIDPR 317
+SD+W+FGV+L+EI T + +P D + +++
Sbjct: 432 YNKFSIKSDVWAFGVLLWEIATYG-----------------MSPYPGIDLSQVYELLEKD 474
Query: 318 LRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQES 362
R + +V +L C + NP +RP+ ++ ++ + QES
Sbjct: 475 YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 519
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 113/229 (49%), Gaps = 28/229 (12%)
Query: 58 HLRVFDMQELREATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLN-NHGLQ 116
LR+ EL+ R+ +G G FG+VYKG P +G + VA+K LN G +
Sbjct: 31 QLRILKETELK-------RVKVLGSGAFGTVYKGIWVP-EGETVKIPVAIKILNETTGPK 82
Query: 117 GHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSR---- 172
+ +++ E + + HP+LV+LLG C + IQ LV + MP+ L + +
Sbjct: 83 ANVEFMDEALIMASMDHPHLVRLLGVCLSPT---IQ--LVTQLMPHGCLLEYVHEHKDNI 137
Query: 173 -AQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAR 231
+Q L W ++ A+G+ YL E ++++RD NVL+ K++DFGLAR
Sbjct: 138 GSQLLLNWCVQI------AKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLAR 188
Query: 232 EGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILT 280
+ + + + A E I QSD+WS+GV ++E++T
Sbjct: 189 LLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMT 237
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 126/285 (44%), Gaps = 32/285 (11%)
Query: 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVK 138
K+G G +G VY+G + L VAVK L ++ +++L E + + HPNLV+
Sbjct: 224 KLGGGQYGEVYEGVWKKYS-----LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQ 277
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHE 198
LLG C+ E I + E+M +L D L + + L + + + YL +
Sbjct: 278 LLGVCTREPPFYI----ITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK 333
Query: 199 GLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIE 258
I+R+ N L+ N K++DFGL+R TGD + APE +
Sbjct: 334 K---NFIHRNLAARNCLVGENHLVKVADFGLSRL-MTGDTYTAHAGAKFPIKWTAPESLA 389
Query: 259 TGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPA-DGKKFSMMIDPR 317
+SD+W+FGV+L+EI T + +P D + +++
Sbjct: 390 YNKFSIKSDVWAFGVLLWEIATYG-----------------MSPYPGIDLSQVYELLEKD 432
Query: 318 LRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQES 362
R + +V +L C + NP +RP+ ++ ++ + QES
Sbjct: 433 YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 477
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 141/312 (45%), Gaps = 35/312 (11%)
Query: 48 IPELYKEKEHHLRVFDMQELREATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAV 107
+P Y++ + F +E+ + R+ IG G FG V G ++ L G+ E L VA+
Sbjct: 1 MPHTYEDPNQAVHEF-AKEIEASCITIERV--IGAGEFGEVCSGRLK-LPGKRE-LPVAI 55
Query: 108 KKLN-NHGLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLE 166
K L + + + +L E +G HPN++ L G + + ++V EYM N SL
Sbjct: 56 KTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHLEGVVT----KSKPVMIVTEYMENGSL- 110
Query: 167 DRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSD 226
D + + ++ G + G+ YL + + ++RD N+L++ N K+SD
Sbjct: 111 DTFLKKNDGQFTVIQLVGMLRGISAGMKYLSD---MGYVHRDLAARNILINSNLVCKVSD 167
Query: 227 FGLAR---EGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRR 283
FGL+R + P +T + + APE I S SD+WS+G+V++E+++
Sbjct: 168 FGLSRVLEDDPEAAYTTRGGKI--PIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVS--- 222
Query: 284 VLERNRPTMEQKLLEWVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPE 343
RP E + +K ++ R ++ + +L +C +K
Sbjct: 223 --YGERPYWEMTNQDVIKA-----------VEEGYRLPSPMDCPAALYQLMLDCWQKERN 269
Query: 344 ERPTMNQVVESL 355
RP +++V L
Sbjct: 270 SRPKFDEIVNML 281
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 101/215 (46%), Gaps = 20/215 (9%)
Query: 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVK 138
++GEG FG V+ L + ++VAVK L + + E + L ++ H ++V+
Sbjct: 25 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 84
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSL---------EDRLFSRAQPTLPWKTRLEIILGA 189
G C+ G L+V+EYM + L + +L + + P L +L
Sbjct: 85 FFGVCT----EGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAV 140
Query: 190 AE----GLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAV 245
A G+ YL GL ++RD T N L+ K+ DFG++R+ + D+ V
Sbjct: 141 ASQVAAGMVYL-AGLHF--VHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRT 197
Query: 246 VGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILT 280
+ + PE I ++SD+WSFGVVL+EI T
Sbjct: 198 MLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFT 232
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 124/285 (43%), Gaps = 32/285 (11%)
Query: 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVK 138
K+G G +G VY G + L VAVK L ++ +++L E + + HPNLV+
Sbjct: 39 KLGGGQYGEVYVGVWKKYS-----LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQ 92
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHE 198
LLG C+ E I V EYMP +L D L + + L + + + YL +
Sbjct: 93 LLGVCTLEPPFYI----VTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLEK 148
Query: 199 GLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIE 258
I+RD N L+ N K++DFGL+R TGD + APE +
Sbjct: 149 K---NFIHRDLAARNCLVGENHVVKVADFGLSRL-MTGDTYTAHAGAKFPIKWTAPESLA 204
Query: 259 TGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPA-DGKKFSMMIDPR 317
+SD+W+FGV+L+EI T + +P D + +++
Sbjct: 205 YNTFSIKSDVWAFGVLLWEIATYG-----------------MSPYPGIDLSQVYDLLEKG 247
Query: 318 LRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQES 362
R + +V +L C K +P +RP+ + ++ + +S
Sbjct: 248 YRMEQPEGCPPKVYELMRACWKWSPADRPSFAETHQAFETMFHDS 292
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 101/215 (46%), Gaps = 20/215 (9%)
Query: 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVK 138
++GEG FG V+ L + ++VAVK L + + E + L ++ H ++V+
Sbjct: 19 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 78
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSL---------EDRLFSRAQPTLPWKTRLEIILGA 189
G C+ G L+V+EYM + L + +L + + P L +L
Sbjct: 79 FFGVCT----EGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAV 134
Query: 190 AE----GLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAV 245
A G+ YL GL ++RD T N L+ K+ DFG++R+ + D+ V
Sbjct: 135 ASQVAAGMVYL-AGLHF--VHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRT 191
Query: 246 VGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILT 280
+ + PE I ++SD+WSFGVVL+EI T
Sbjct: 192 MLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFT 226
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 122/273 (44%), Gaps = 36/273 (13%)
Query: 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVK 138
++G G G V+ G +G + VAVK L G +LAE + + H LV+
Sbjct: 20 RLGAGQAGEVWMGY---YNGHTK---VAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVR 72
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHE 198
L + E ++ EYM N SL D L + + L L++ AEG+A++ E
Sbjct: 73 LYAVVTQEP-----IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 127
Query: 199 GLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIE 258
I+RD + +N+L+ K++DFGLAR + T A + APE I
Sbjct: 128 R---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPI-KWTAPEAIN 183
Query: 259 TGHLKSQSDIWSFGVVLYEILTGRRVLE--RNRPTMEQKLLEWVKQFPADGKKFSMMIDP 316
G +SD+WSFG++L EI+T R+ P + Q L ++ M+ P
Sbjct: 184 YGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL-----------ERGYRMVRP 232
Query: 317 RLRNQYSINAARRVAKLADNCLKKNPEERPTMN 349
N + +L C K+ PE+RPT +
Sbjct: 233 D-------NCPEELYQLMRLCWKERPEDRPTFD 258
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 124/272 (45%), Gaps = 34/272 (12%)
Query: 78 LKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLV 137
+K+G+G FG V+ GT +G VA+K L G + +L E Q + + H LV
Sbjct: 24 VKLGQGCFGEVWMGT---WNGTTR---VAIKTLKP-GTMSPEAFLQEAQVMKKIRHEKLV 76
Query: 138 KLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLH 197
+L S E +V EYM SL D L L +++ A G+AY+
Sbjct: 77 QLYAVVSEEP-----IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE 131
Query: 198 EGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYI 257
+ ++RD + +N+L+ N K++DFGLAR ++T A + APE
Sbjct: 132 R---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI-KWTAPEAA 187
Query: 258 ETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTM-EQKLLEWVKQFPADGKKFSMMIDP 316
G +SD+WSFG++L E+ T RV P M +++L+ V+ + + M P
Sbjct: 188 LYGRFTIKSDVWSFGILLTELTTKGRV---PYPGMVNREVLDQVE------RGYRMPCPP 238
Query: 317 RLRNQYSINAARRVAKLADNCLKKNPEERPTM 348
+ L C +K+PEERPT
Sbjct: 239 --------ECPESLHDLMCQCWRKDPEERPTF 262
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 101/215 (46%), Gaps = 20/215 (9%)
Query: 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVK 138
++GEG FG V+ L + ++VAVK L + + E + L ++ H ++V+
Sbjct: 48 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 107
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSL---------EDRLFSRAQPTLPWKTRLEIILGA 189
G C+ G L+V+EYM + L + +L + + P L +L
Sbjct: 108 FFGVCT----EGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAV 163
Query: 190 AE----GLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAV 245
A G+ YL GL ++RD T N L+ K+ DFG++R+ + D+ V
Sbjct: 164 ASQVAAGMVYL-AGLHF--VHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRT 220
Query: 246 VGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILT 280
+ + PE I ++SD+WSFGVVL+EI T
Sbjct: 221 MLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFT 255
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 121/273 (44%), Gaps = 38/273 (13%)
Query: 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVK 138
++G G FG V+ GT +G + VA+K L G + +L E Q + + H LV+
Sbjct: 16 RLGNGQFGEVWMGT---WNGNTK---VAIKTLK-PGTMSPESFLEEAQIMKKLKHDKLVQ 68
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHE 198
L S E +V EYM SL D L L +++ A G+AY+
Sbjct: 69 LYAVVSEEP-----IYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIER 123
Query: 199 GLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIE 258
+ I+RD +++N+L+ K++DFGLAR + T A + APE
Sbjct: 124 ---MNYIHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKF-PIKWTAPEAAL 179
Query: 259 TGHLKSQSDIWSFGVVLYEILTGRRVL---ERNRPTMEQKLLEWVKQFPADGKKFSMMID 315
G +SD+WSFG++L E++T RV NR +EQ ++
Sbjct: 180 YGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQ-------------------VE 220
Query: 316 PRLRNQYSINAARRVAKLADNCLKKNPEERPTM 348
R + + +L +C KK+PEERPT
Sbjct: 221 RGYRMPCPQDCPISLHELMIHCWKKDPEERPTF 253
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 124/272 (45%), Gaps = 34/272 (12%)
Query: 78 LKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLV 137
+K+G+G FG V+ GT +G VA+K L G + +L E Q + + H LV
Sbjct: 24 VKLGQGCFGEVWMGT---WNGTTR---VAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLV 76
Query: 138 KLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLH 197
+L S E +V EYM SL D L L +++ A G+AY+
Sbjct: 77 QLYAVVSEEP-----IYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE 131
Query: 198 EGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYI 257
+ ++RD + +N+L+ N K++DFGLAR ++T A + APE
Sbjct: 132 R---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI-KWTAPEAA 187
Query: 258 ETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTM-EQKLLEWVKQFPADGKKFSMMIDP 316
G +SD+WSFG++L E+ T RV P M +++L+ V+ + + M P
Sbjct: 188 LYGRFTIKSDVWSFGILLTELTTKGRV---PYPGMVNREVLDQVE------RGYRMPCPP 238
Query: 317 RLRNQYSINAARRVAKLADNCLKKNPEERPTM 348
+ L C +K+PEERPT
Sbjct: 239 --------ECPESLHDLMCQCWRKDPEERPTF 262
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 124/272 (45%), Gaps = 34/272 (12%)
Query: 78 LKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLV 137
+K+G+G FG V+ GT +G VA+K L G + +L E Q + + H LV
Sbjct: 24 VKLGQGCFGEVWMGT---WNGTTR---VAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLV 76
Query: 138 KLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLH 197
+L S E +V EYM SL D L L +++ A G+AY+
Sbjct: 77 QLYAVVSEEP-----IYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE 131
Query: 198 EGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYI 257
+ ++RD + +N+L+ N K++DFGLAR ++T A + APE
Sbjct: 132 R---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI-KWTAPEAA 187
Query: 258 ETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTM-EQKLLEWVKQFPADGKKFSMMIDP 316
G +SD+WSFG++L E+ T RV P M +++L+ V+ + + M P
Sbjct: 188 LYGRFTIKSDVWSFGILLTELTTKGRV---PYPGMVNREVLDQVE------RGYRMPCPP 238
Query: 317 RLRNQYSINAARRVAKLADNCLKKNPEERPTM 348
+ L C +K+PEERPT
Sbjct: 239 --------ECPESLHDLMCQCWRKDPEERPTF 262
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 119/273 (43%), Gaps = 32/273 (11%)
Query: 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVK 138
K+G G FG V+ T + VAVK + G + +LAE + + H LVK
Sbjct: 22 KLGAGQFGEVWMATY------NKHTKVAVKTMKP-GSMSVEAFLAEANVMKTLQHDKLVK 74
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHE 198
L + E ++ E+M SL D L S P ++ AEG+A++ +
Sbjct: 75 LHAVVTKE-----PIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQ 129
Query: 199 GLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIE 258
I+RD + +N+L+ + K++DFGLAR ++T A + APE I
Sbjct: 130 R---NYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPI-KWTAPEAIN 185
Query: 259 TGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKFSMMIDPRL 318
G +SD+WSFG++L EI+T R+ P M + A + + M PR
Sbjct: 186 FGSFTIKSDVWSFGILLMEIVTYGRI---PYPGMSNP-----EVIRALERGYRM---PRP 234
Query: 319 RNQYSINAARRVAKLADNCLKKNPEERPTMNQV 351
N + + C K PEERPT +
Sbjct: 235 E-----NCPEELYNIMMRCWKNRPEERPTFEYI 262
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 124/272 (45%), Gaps = 34/272 (12%)
Query: 78 LKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLV 137
+K+G+G FG V+ GT +G VA+K L G + +L E Q + + H LV
Sbjct: 15 VKLGQGCFGEVWMGT---WNGTTR---VAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLV 67
Query: 138 KLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLH 197
+L S E +V EYM SL D L L +++ A G+AY+
Sbjct: 68 QLYAVVSEEP-----IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE 122
Query: 198 EGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYI 257
+ ++RD + +N+L+ N K++DFGLAR ++T A + APE
Sbjct: 123 R---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI-KWTAPEAA 178
Query: 258 ETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTM-EQKLLEWVKQFPADGKKFSMMIDP 316
G +SD+WSFG++L E+ T RV P M +++L+ V+ + + M P
Sbjct: 179 LYGRFTIKSDVWSFGILLTELTTKGRV---PYPGMVNREVLDQVE------RGYRMPCPP 229
Query: 317 RLRNQYSINAARRVAKLADNCLKKNPEERPTM 348
+ L C +K+PEERPT
Sbjct: 230 --------ECPESLHDLMCQCWRKDPEERPTF 253
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 124/272 (45%), Gaps = 34/272 (12%)
Query: 78 LKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLV 137
+K+G+G FG V+ GT +G VA+K L G + +L E Q + + H LV
Sbjct: 24 VKLGQGCFGEVWMGT---WNGTTR---VAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLV 76
Query: 138 KLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLH 197
+L S E +V EYM SL D L L +++ A G+AY+
Sbjct: 77 QLYAVVSEEP-----IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE 131
Query: 198 EGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYI 257
+ ++RD + +N+L+ N K++DFGLAR ++T A + APE
Sbjct: 132 R---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI-KWTAPEAA 187
Query: 258 ETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTM-EQKLLEWVKQFPADGKKFSMMIDP 316
G +SD+WSFG++L E+ T RV P M +++L+ V+ + + M P
Sbjct: 188 LYGRFTIKSDVWSFGILLTELTTKGRV---PYPGMVNREVLDQVE------RGYRMPCPP 238
Query: 317 RLRNQYSINAARRVAKLADNCLKKNPEERPTM 348
+ L C +K+PEERPT
Sbjct: 239 --------ECPESLHDLMCQCWRKDPEERPTF 262
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 125/281 (44%), Gaps = 34/281 (12%)
Query: 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHK-QWLAEVQFLGVVSHPNLV 137
+IG G FG V+ G +R + +VAVK K ++L E + L SHPN+V
Sbjct: 121 QIGRGNFGEVFSGRLR-----ADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIV 175
Query: 138 KLLGYCSTEDERGIQRLLVYEYMPNRSLEDRL-FSRAQPT-LPWKTRLEIILGAAEGLAY 195
+L+G C+ Q+ +Y M D L F R + L KT L+++ AA G+ Y
Sbjct: 176 RLIGVCT-------QKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEY 228
Query: 196 LHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPE 255
L I+RD N L+ K+SDFG++RE G + + APE
Sbjct: 229 LESKC---CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPE 285
Query: 256 YIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKFSMMID 315
+ G S+SD+WSFG++L+E + + P + + ++F G +
Sbjct: 286 ALNYGRYSSESDVWSFGILLWETFS---LGASPYPNLSNQQ---TREFVEKGGRLPC--- 336
Query: 316 PRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLK 356
P L V +L + C P +RP+ + + + L+
Sbjct: 337 PEL-------CPDAVFRLMEQCWAYEPGQRPSFSTIYQELQ 370
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 124/272 (45%), Gaps = 34/272 (12%)
Query: 78 LKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLV 137
+K+G+G FG V+ GT +G VA+K L G + +L E Q + + H LV
Sbjct: 13 VKLGQGCFGEVWMGT---WNGTTR---VAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLV 65
Query: 138 KLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLH 197
+L S E +V EYM SL D L L +++ A G+AY+
Sbjct: 66 QLYAVVSEEP-----IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE 120
Query: 198 EGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYI 257
+ ++RD + +N+L+ N K++DFGLAR ++T A + APE
Sbjct: 121 R---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI-KWTAPEAA 176
Query: 258 ETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTM-EQKLLEWVKQFPADGKKFSMMIDP 316
G +SD+WSFG++L E+ T RV P M +++L+ V+ + + M P
Sbjct: 177 LYGRFTIKSDVWSFGILLTELTTKGRV---PYPGMVNREVLDQVE------RGYRMPCPP 227
Query: 317 RLRNQYSINAARRVAKLADNCLKKNPEERPTM 348
+ L C +K+PEERPT
Sbjct: 228 --------ECPESLHDLMCQCWRKDPEERPTF 251
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 118/271 (43%), Gaps = 31/271 (11%)
Query: 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVK 138
++G G FG V+ G VAVK L G + +L E + + H LV+
Sbjct: 20 RLGAGQFGEVWMGYY------NNSTKVAVKTLK-PGTMSVQAFLEEANLMKTLQHDKLVR 72
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHE 198
L + E+ I + EYM SL D L S + ++ AEG+AY+
Sbjct: 73 LYAVVTREEPIYI----ITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIER 128
Query: 199 GLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIE 258
I+RD + +NVL+ + K++DFGLAR ++T A + APE I
Sbjct: 129 K---NYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPI-KWTAPEAIN 184
Query: 259 TGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKFSMMIDPRL 318
G +SD+WSFG++LYEI+T ++ R + A + + M PR+
Sbjct: 185 FGCFTIKSDVWSFGILLYEIVTYGKIPYPGRTNAD--------VMTALSQGYRM---PRV 233
Query: 319 RNQYSINAARRVAKLADNCLKKNPEERPTMN 349
N + + C K+ EERPT +
Sbjct: 234 E-----NCPDELYDIMKMCWKEKAEERPTFD 259
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 123/272 (45%), Gaps = 34/272 (12%)
Query: 78 LKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLV 137
+K+G+G FG V+ GT +G VA+K L G + +L E Q + + H LV
Sbjct: 273 VKLGQGCFGEVWMGT---WNGTTR---VAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLV 325
Query: 138 KLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLH 197
+L S E +V EYM SL D L L +++ A G+AY+
Sbjct: 326 QLYAVVSEEP-----IYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE 380
Query: 198 EGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYI 257
+ ++RD + +N+L+ N K++DFGLAR ++T A + APE
Sbjct: 381 R---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAA 436
Query: 258 ETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTM-EQKLLEWVKQFPADGKKFSMMIDP 316
G +SD+WSFG++L E+ T RV P M +++L+ V+ + + M P
Sbjct: 437 LYGRFTIKSDVWSFGILLTELTTKGRV---PYPGMVNREVLDQVE------RGYRMPCPP 487
Query: 317 RLRNQYSINAARRVAKLADNCLKKNPEERPTM 348
+ L C +K PEERPT
Sbjct: 488 --------ECPESLHDLMCQCWRKEPEERPTF 511
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 145/319 (45%), Gaps = 35/319 (10%)
Query: 42 LPSPRSIPELYKEKEHHLRVFDMQELREATN-GFNRMLKIGEGGFGSVYKGTIRPLDGRG 100
LP R+ + + ++ V + + +ATN +++ +G G FG V G ++ L +
Sbjct: 16 LPGLRTFVDPHTFEDPTQTVHEFAKELDATNISIDKV--VGAGEFGEVCSGRLK-LPSKK 72
Query: 101 EPLVVAVKKLN-NHGLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEY 159
E + VA+K L + + + +L E +G HPN+++L G + + ++V E
Sbjct: 73 E-ISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVT----KSKPVMIVTEX 127
Query: 160 MPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGN 219
M N SL D + + ++ G A G+ YL + + ++RD N+L++ N
Sbjct: 128 MENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD---MGAVHRDLAARNILINSN 183
Query: 220 FKPKLSDFGLAR---EGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLY 276
K+SDFGL+R + P +T + + +PE I S SD+WS+G+VL+
Sbjct: 184 LVCKVSDFGLSRVLEDDPEAAYTTRGGKI--PIRWTSPEAIAYRKFTSASDVWSYGIVLW 241
Query: 277 EILTGRRVLERNRPTMEQKLLEWVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADN 336
E+++ RP E + +K +D R ++ + +L +
Sbjct: 242 EVMS-----YGERPYWEMSNQDVIKA-----------VDEGYRLPPPMDCPAALYQLMLD 285
Query: 337 CLKKNPEERPTMNQVVESL 355
C +K+ RP Q+V L
Sbjct: 286 CWQKDRNNRPKFEQIVSIL 304
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 112/208 (53%), Gaps = 20/208 (9%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKL-NNHGLQGHKQWLAEVQFLGVVSHPNLVK 138
IG G FG V +G ++ G+ E VA+K L + + +++L+E +G HPN+++
Sbjct: 22 IGAGEFGEVCRGRLKA-PGKKES-CVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIR 79
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLEDRL-FSRAQPTLPWKTRLEIILGAAEGLAYLH 197
L G + + +++ E+M N +L+ L + Q T+ + ++ G A G+ YL
Sbjct: 80 LEGVVTN----SMPVMILTEFMENGALDSFLRLNDGQFTV--IQLVGMLRGIASGMRYLA 133
Query: 198 EGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAR--EGPTGDHTHVSTAVVG---TYGYA 252
E + ++RD N+L++ N K+SDFGL+R E + D T+ S+ +G +
Sbjct: 134 E---MSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSS--LGGKIPIRWT 188
Query: 253 APEYIETGHLKSQSDIWSFGVVLYEILT 280
APE I S SD WS+G+V++E+++
Sbjct: 189 APEAIAFRKFTSASDAWSYGIVMWEVMS 216
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 143/320 (44%), Gaps = 37/320 (11%)
Query: 42 LPSPRSI--PELYKEKEHHLRVFDMQELREATNGFNRMLKIGEGGFGSVYKGTIRPLDGR 99
LP R+ P Y++ + F +EL +++ +G G FG V G ++ L +
Sbjct: 16 LPGLRTYVDPHTYEDPTQTVHEF-AKELDATNISIDKV--VGAGEFGEVCSGRLK-LPSK 71
Query: 100 GEPLVVAVKKLN-NHGLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYE 158
E + VA+K L + + + +L E +G HPN+++L G + + ++V E
Sbjct: 72 KE-ISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVT----KSKPVMIVTE 126
Query: 159 YMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDG 218
M N SL D + + ++ G A G+ YL + + ++RD N+L++
Sbjct: 127 XMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLAARNILINS 182
Query: 219 NFKPKLSDFGLAR---EGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVL 275
N K+SDFGL+R + P +T + + +PE I S SD+WS+G+VL
Sbjct: 183 NLVCKVSDFGLSRVLEDDPEAAYTTRGGKI--PIRWTSPEAIAYRKFTSASDVWSYGIVL 240
Query: 276 YEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLAD 335
+E+++ RP E + +K +D R ++ + +L
Sbjct: 241 WEVMS-----YGERPYWEMSNQDVIKA-----------VDEGYRLPPPMDCPAALYQLML 284
Query: 336 NCLKKNPEERPTMNQVVESL 355
+C +K+ RP Q+V L
Sbjct: 285 DCWQKDRNNRPKFEQIVSIL 304
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 105/223 (47%), Gaps = 20/223 (8%)
Query: 124 EVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRL 183
E Q ++HP +V + E G +V EY+ +L D + + P P K +
Sbjct: 62 EAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG-PMTP-KRAI 119
Query: 184 EIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLARE-GPTGDHTHVS 242
E+I A + L + H+ +I+RD K +N+L+ K+ DFG+AR +G+ +
Sbjct: 120 EVIADACQALNFSHQN---GIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQT 176
Query: 243 TAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQ 302
AV+GT Y +PE + ++SD++S G VLYE+LTG + P + V++
Sbjct: 177 AAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPV--SVAYQHVRE 234
Query: 303 FPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEER 345
P I P R++ ++A L L KNPE R
Sbjct: 235 DP---------IPPSARHE-GLSADLDAVVL--KALAKNPENR 265
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 106/223 (47%), Gaps = 20/223 (8%)
Query: 124 EVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRL 183
E Q ++HP +V + E G +V EY+ +L D + + P P K +
Sbjct: 62 EAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG-PMTP-KRAI 119
Query: 184 EIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLARE-GPTGDHTHVS 242
E+I A + L + H+ +I+RD K +N+++ K+ DFG+AR +G+ +
Sbjct: 120 EVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQT 176
Query: 243 TAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQ 302
AV+GT Y +PE + ++SD++S G VLYE+LTG + P + + V++
Sbjct: 177 AAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSP--DSVAYQHVRE 234
Query: 303 FPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEER 345
P I P R++ ++A L L KNPE R
Sbjct: 235 DP---------IPPSARHE-GLSADLDAVVL--KALAKNPENR 265
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 123/273 (45%), Gaps = 34/273 (12%)
Query: 78 LKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLV 137
+K+G+G FG V+ GT +G VA+K L G + +L E Q + + H LV
Sbjct: 17 VKLGQGCFGEVWMGT---WNGTTR---VAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLV 69
Query: 138 KLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLH 197
+L S E +V EYM SL D L L +++ A G+AY+
Sbjct: 70 QLYAVVSEEP-----IYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE 124
Query: 198 EGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYI 257
+ ++RD + +N+L+ N K++DFGLAR ++T A + APE
Sbjct: 125 R---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI-KWTAPEAA 180
Query: 258 ETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTM-EQKLLEWVKQFPADGKKFSMMIDP 316
G +SD+WSFG++L E+ T RV P M +++L+ V+ + + M P
Sbjct: 181 LYGRFTIKSDVWSFGILLTELTTKGRV---PYPGMVNREVLDQVE------RGYRMPCPP 231
Query: 317 RLRNQYSINAARRVAKLADNCLKKNPEERPTMN 349
+ L C +K PEERPT
Sbjct: 232 --------ECPESLHDLMCQCWRKEPEERPTFE 256
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 123/272 (45%), Gaps = 34/272 (12%)
Query: 78 LKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLV 137
+K+G+G FG V+ GT +G VA+K L G + +L E Q + + H LV
Sbjct: 190 VKLGQGCFGEVWMGT---WNGTTR---VAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLV 242
Query: 138 KLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLH 197
+L S E +V EYM SL D L L +++ A G+AY+
Sbjct: 243 QLYAVVSEEP-----IYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE 297
Query: 198 EGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYI 257
+ ++RD + +N+L+ N K++DFGLAR ++T A + APE
Sbjct: 298 R---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI-KWTAPEAA 353
Query: 258 ETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTM-EQKLLEWVKQFPADGKKFSMMIDP 316
G +SD+WSFG++L E+ T RV P M +++L+ V+ + + M P
Sbjct: 354 LYGRFTIKSDVWSFGILLTELTTKGRV---PYPGMVNREVLDQVE------RGYRMPCPP 404
Query: 317 RLRNQYSINAARRVAKLADNCLKKNPEERPTM 348
+ L C +K PEERPT
Sbjct: 405 --------ECPESLHDLMCQCWRKEPEERPTF 428
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 129/286 (45%), Gaps = 31/286 (10%)
Query: 69 EATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFL 128
++ + R+ KIGEG FG K + G V+ ++ + ++ EV L
Sbjct: 21 QSMEKYVRLQKIGEGSFG---KAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVL 77
Query: 129 GVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILG 188
+ HPN+V+ Y + +E G +V +Y L R+ ++ L+ +
Sbjct: 78 ANMKHPNIVQ---YRESFEENG-SLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQ 133
Query: 189 AAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGT 248
L ++H+ ++++RD K+ N+ L + +L DFG+AR ++ A +GT
Sbjct: 134 ICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIAR--VLNSTVELARACIGT 188
Query: 249 YGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVK-QFPADG 307
Y +PE E ++SDIW+ G VLYE+ T + E +M+ +L+ + FP
Sbjct: 189 PYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAG--SMKNLVLKIISGSFPP-- 244
Query: 308 KKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVE 353
S++ + + L K+NP +RP++N ++E
Sbjct: 245 --------------VSLHYSYDLRSLVSQLFKRNPRDRPSVNSILE 276
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 110/219 (50%), Gaps = 18/219 (8%)
Query: 70 ATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKK--LNNHGLQGHKQWLAEVQF 127
+ F ++ KIGEG +G VYK + L G VVA+KK L+ + E+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNK-LTGE----VVALKKIRLDTETEGVPSTAIREISL 55
Query: 128 LGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIIL 187
L ++HPN+VKLL TE+ + LV+E++ ++ L+D + + A +P +
Sbjct: 56 LKELNHPNIVKLLDVIHTEN----KLYLVFEFL-HQDLKDFMDASALTGIPLPLIKSYLF 110
Query: 188 GAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVG 247
+GLA+ H +V++RD K N+L++ KL+DFGLAR T+ V
Sbjct: 111 QLLQGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-- 165
Query: 248 TYGYAAPE-YIETGHLKSQSDIWSFGVVLYEILTGRRVL 285
T Y APE + + + DIWS G + E++T R +
Sbjct: 166 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 204
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 123/272 (45%), Gaps = 34/272 (12%)
Query: 78 LKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLV 137
+K+G+G FG V+ GT +G VA+K L G + +L E Q + + H LV
Sbjct: 190 VKLGQGCFGEVWMGT---WNGTTR---VAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLV 242
Query: 138 KLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLH 197
+L S E +V EYM SL D L L +++ A G+AY+
Sbjct: 243 QLYAVVSEEP-----IYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE 297
Query: 198 EGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYI 257
+ ++RD + +N+L+ N K++DFGLAR ++T A + APE
Sbjct: 298 R---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI-KWTAPEAA 353
Query: 258 ETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTM-EQKLLEWVKQFPADGKKFSMMIDP 316
G +SD+WSFG++L E+ T RV P M +++L+ V+ + + M P
Sbjct: 354 LYGRFTIKSDVWSFGILLTELTTKGRV---PYPGMVNREVLDQVE------RGYRMPCPP 404
Query: 317 RLRNQYSINAARRVAKLADNCLKKNPEERPTM 348
+ L C +K PEERPT
Sbjct: 405 --------ECPESLHDLMCQCWRKEPEERPTF 428
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 119/273 (43%), Gaps = 32/273 (11%)
Query: 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVK 138
K+G G FG V+ T + VAVK + G + +LAE + + H LVK
Sbjct: 195 KLGAGQFGEVWMATY------NKHTKVAVKTMKP-GSMSVEAFLAEANVMKTLQHDKLVK 247
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHE 198
L + E ++ E+M SL D L S P ++ AEG+A++ +
Sbjct: 248 LHAVVTKE-----PIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQ 302
Query: 199 GLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIE 258
I+RD + +N+L+ + K++DFGLAR ++T A + APE I
Sbjct: 303 R---NYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPI-KWTAPEAIN 358
Query: 259 TGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKFSMMIDPRL 318
G +SD+WSFG++L EI+T R+ P M + A + + M PR
Sbjct: 359 FGSFTIKSDVWSFGILLMEIVTYGRI---PYPGMSNP-----EVIRALERGYRM---PRP 407
Query: 319 RNQYSINAARRVAKLADNCLKKNPEERPTMNQV 351
N + + C K PEERPT +
Sbjct: 408 E-----NCPEELYNIMMRCWKNRPEERPTFEYI 435
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 105/223 (47%), Gaps = 20/223 (8%)
Query: 124 EVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRL 183
E Q ++HP +V + E G +V EY+ +L D + + P P K +
Sbjct: 62 EAQNAAALNHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG-PMTP-KRAI 119
Query: 184 EIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLARE-GPTGDHTHVS 242
E+I A + L + H+ +I+RD K +N+++ K+ DFG+AR +G+ +
Sbjct: 120 EVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQT 176
Query: 243 TAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQ 302
AV+GT Y +PE + ++SD++S G VLYE+LTG + P + V++
Sbjct: 177 AAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPV--SVAYQHVRE 234
Query: 303 FPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEER 345
P I P R++ ++A L L KNPE R
Sbjct: 235 DP---------IPPSARHE-GLSADLDAVVL--KALAKNPENR 265
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 123/272 (45%), Gaps = 34/272 (12%)
Query: 78 LKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLV 137
+K+G+G FG V+ GT +G VA+K L G + +L E Q + + H LV
Sbjct: 24 VKLGQGCFGEVWMGT---WNGTTR---VAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLV 76
Query: 138 KLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLH 197
+L S E +V EYM SL D L L +++ A G+AY+
Sbjct: 77 QLYAVVSEEP-----IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE 131
Query: 198 EGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYI 257
+ ++RD +N+L+ N K++DFGLAR ++T A + APE
Sbjct: 132 R---MNYVHRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAA 187
Query: 258 ETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTM-EQKLLEWVKQFPADGKKFSMMIDP 316
G +SD+WSFG++L E+ T RV P M +++L+ V+ + + M P
Sbjct: 188 LYGRFTIKSDVWSFGILLTELTTKGRV---PYPGMVNREVLDQVE------RGYRMPCPP 238
Query: 317 RLRNQYSINAARRVAKLADNCLKKNPEERPTM 348
+ L C +K+PEERPT
Sbjct: 239 --------ECPESLHDLMCQCWRKDPEERPTF 262
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 128/280 (45%), Gaps = 32/280 (11%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLN-NHGLQGHKQWLAEVQFLGVVSHPNLVK 138
IG G FG V G ++ + G+ E + VA+K L + + + +L+E +G HPN++
Sbjct: 37 IGVGEFGEVCSGRLK-VPGKRE-ICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIH 94
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHE 198
L G + + +++ EYM N SL D + + ++ G G+ YL +
Sbjct: 95 LEGVVT----KCKPVMIITEYMENGSL-DAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSD 149
Query: 199 GLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAR---EGPTGDHTHVSTAVVGTYGYAAPE 255
+ ++RD N+L++ N K+SDFG++R + P +T + + APE
Sbjct: 150 ---MSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKI--PIRWTAPE 204
Query: 256 YIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKFSMMID 315
I S SD+WS+G+V++E+++ RP + + +K I+
Sbjct: 205 AIAYRKFTSASDVWSYGIVMWEVMS-----YGERPYWDMSNQDVIKA-----------IE 248
Query: 316 PRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESL 355
R ++ + +L +C +K +RP Q+V L
Sbjct: 249 EGYRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNML 288
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 123/279 (44%), Gaps = 32/279 (11%)
Query: 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVK 138
K+G G +G VY+G + L VAVK L ++ +++L E + + HPNLV+
Sbjct: 20 KLGGGQYGEVYEGVWKKYS-----LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQ 73
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHE 198
LLG C+ E I + E+M +L D L + + L + + + YL +
Sbjct: 74 LLGVCTREPPFYI----ITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK 129
Query: 199 GLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIE 258
I+RD N L+ N K++DFGL+R TGD + APE +
Sbjct: 130 K---NFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLA 185
Query: 259 TGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPA-DGKKFSMMIDPR 317
+SD+W+FGV+L+EI T + +P D + +++
Sbjct: 186 YNKFSIKSDVWAFGVLLWEIATYG-----------------MSPYPGIDLSQVYELLEKD 228
Query: 318 LRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLK 356
R + +V +L C + NP +RP+ ++ ++ +
Sbjct: 229 YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 267
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 84/280 (30%), Positives = 123/280 (43%), Gaps = 42/280 (15%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQW---LAEVQFLGV 130
F+ + +IG G FG+VY D R VVA+KK++ G Q +++W + EV+FL
Sbjct: 17 FSDLREIGHGSFGAVYFAR----DVRNSE-VVAIKKMSYSGKQSNEKWQDIIKEVRFLQK 71
Query: 131 VSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAA 190
+ HPN ++ G C + LV EY S D L +P L + GA
Sbjct: 72 LRHPNTIQYRG-CYLREHTA---WLVMEYCLG-SASDLLEVHKKP-LQEVEIAAVTHGAL 125
Query: 191 EGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYG 250
+GLAYLH +I+RD K N+LL KL DFG A + VGT
Sbjct: 126 QGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPAN------XFVGTPY 176
Query: 251 YAAPEYI---ETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADG 307
+ APE I + G + D+WS G+ E+ ER P + + +
Sbjct: 177 WMAPEVILAMDEGQYDGKVDVWSLGITCIEL------AERKPPLFNMNAMSALYHIAQNE 230
Query: 308 KKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPT 347
P L++ + R D+CL+K P++RPT
Sbjct: 231 S-------PALQSGHWSEYFR---NFVDSCLQKIPQDRPT 260
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 111/208 (53%), Gaps = 20/208 (9%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKL-NNHGLQGHKQWLAEVQFLGVVSHPNLVK 138
IG G FG V +G ++ G+ E VA+K L + + +++L+E +G HPN+++
Sbjct: 24 IGAGEFGEVCRGRLKA-PGKKES-CVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIR 81
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLEDRL-FSRAQPTLPWKTRLEIILGAAEGLAYLH 197
L G + + +++ E+M N +L+ L + Q T+ + ++ G A G+ YL
Sbjct: 82 LEGVVTN----SMPVMILTEFMENGALDSFLRLNDGQFTV--IQLVGMLRGIASGMRYLA 135
Query: 198 EGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAR--EGPTGDHTHVSTAVVG---TYGYA 252
E + ++RD N+L++ N K+SDFGL+R E + D T S+ +G +
Sbjct: 136 E---MSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSS--LGGKIPIRWT 190
Query: 253 APEYIETGHLKSQSDIWSFGVVLYEILT 280
APE I S SD WS+G+V++E+++
Sbjct: 191 APEAIAFRKFTSASDAWSYGIVMWEVMS 218
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 123/272 (45%), Gaps = 34/272 (12%)
Query: 78 LKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLV 137
+K+G+G FG V+ GT +G VA+K L G + +L E Q + + H LV
Sbjct: 24 VKLGQGCFGEVWMGT---WNGTTR---VAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLV 76
Query: 138 KLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLH 197
+L S E +V EYM SL D L L +++ A G+AY+
Sbjct: 77 QLYAVVSEEP-----IYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE 131
Query: 198 EGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYI 257
+ ++RD + +N+L+ N K++DFGLAR + T A + APE
Sbjct: 132 R---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKF-PIKWTAPEAA 187
Query: 258 ETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTM-EQKLLEWVKQFPADGKKFSMMIDP 316
G +SD+WSFG++L E+ T RV P M +++L+ V+ + + M P
Sbjct: 188 LYGRFTIKSDVWSFGILLTELTTKGRV---PYPGMVNREVLDQVE------RGYRMPCPP 238
Query: 317 RLRNQYSINAARRVAKLADNCLKKNPEERPTM 348
+ L C +K+PEERPT
Sbjct: 239 --------ECPESLHDLMCQCWRKDPEERPTF 262
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 83/280 (29%), Positives = 123/280 (43%), Gaps = 42/280 (15%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQW---LAEVQFLGV 130
F+ + +IG G FG+VY D R VVA+KK++ G Q +++W + EV+FL
Sbjct: 56 FSDLREIGHGSFGAVYFAR----DVRNSE-VVAIKKMSYSGKQSNEKWQDIIKEVRFLQK 110
Query: 131 VSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAA 190
+ HPN ++ G C + LV EY S D L +P L + GA
Sbjct: 111 LRHPNTIQYRG-CYLREHTA---WLVMEYCLG-SASDLLEVHKKP-LQEVEIAAVTHGAL 164
Query: 191 EGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYG 250
+GLAYLH +I+RD K N+LL KL DFG + + VGT
Sbjct: 165 QGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFG------SASIMAPANXFVGTPY 215
Query: 251 YAAPEYI---ETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADG 307
+ APE I + G + D+WS G+ E+ ER P + + +
Sbjct: 216 WMAPEVILAMDEGQYDGKVDVWSLGITCIEL------AERKPPLFNMNAMSALYHIAQNE 269
Query: 308 KKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPT 347
P L++ + R D+CL+K P++RPT
Sbjct: 270 S-------PALQSGHWSEYFR---NFVDSCLQKIPQDRPT 299
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 123/273 (45%), Gaps = 34/273 (12%)
Query: 78 LKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLV 137
+K+G+G FG V+ GT +G VA+K L G + +L E Q + + H LV
Sbjct: 24 VKLGQGCFGEVWMGT---WNGTTR---VAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLV 76
Query: 138 KLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLH 197
+L S E +V EYM L D L L +++ A G+AY+
Sbjct: 77 QLYAVVSEEP-----IYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE 131
Query: 198 EGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYI 257
+ ++RD + +N+L+ N K++DFGLAR ++T A + APE
Sbjct: 132 R---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI-KWTAPEAA 187
Query: 258 ETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTM-EQKLLEWVKQFPADGKKFSMMIDP 316
G +SD+WSFG++L E+ T RV P M +++L+ V+ + + M P
Sbjct: 188 LYGRFTIKSDVWSFGILLTELTTKGRV---PYPGMVNREVLDQVE------RGYRMPCPP 238
Query: 317 RLRNQYSINAARRVAKLADNCLKKNPEERPTMN 349
+ L C +K+PEERPT
Sbjct: 239 --------ECPESLHDLMCQCWRKDPEERPTFE 263
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 127/280 (45%), Gaps = 32/280 (11%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLN-NHGLQGHKQWLAEVQFLGVVSHPNLVK 138
+G G FG V G ++ L + E + VA+K L + + + +L E +G HPN+++
Sbjct: 24 VGAGEFGEVCSGRLK-LPSKKE-ISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 81
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHE 198
L G + + ++V E M N SL D + + ++ G A G+ YL +
Sbjct: 82 LEGVVT----KSKPVMIVTEXMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD 136
Query: 199 GLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAR---EGPTGDHTHVSTAVVGTYGYAAPE 255
+ ++RD N+L++ N K+SDFGL+R + P +T + + +PE
Sbjct: 137 ---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI--PIRWTSPE 191
Query: 256 YIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKFSMMID 315
I S SD+WS+G+VL+E+++ RP E + +K +D
Sbjct: 192 AIAYRKFTSASDVWSYGIVLWEVMS-----YGERPYWEMSNQDVIKA-----------VD 235
Query: 316 PRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESL 355
R ++ + +L +C +K+ RP Q+V L
Sbjct: 236 EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 275
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 123/272 (45%), Gaps = 34/272 (12%)
Query: 78 LKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLV 137
+K+G+G FG V+ GT +G VA+K L G + +L E Q + + H LV
Sbjct: 190 VKLGQGCFGEVWMGT---WNGTTR---VAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLV 242
Query: 138 KLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLH 197
+L S E +V EYM SL D L L +++ A G+AY+
Sbjct: 243 QLYAVVSEEP-----IYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE 297
Query: 198 EGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYI 257
+ ++RD + +N+L+ N K++DFGLAR ++T A + APE
Sbjct: 298 R---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI-KWTAPEAA 353
Query: 258 ETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTM-EQKLLEWVKQFPADGKKFSMMIDP 316
G +SD+WSFG++L E+ T RV P M +++L+ V+ + + M P
Sbjct: 354 LYGRFTIKSDVWSFGILLTELTTKGRV---PYPGMVNREVLDQVE------RGYRMPCPP 404
Query: 317 RLRNQYSINAARRVAKLADNCLKKNPEERPTM 348
+ L C +K PEERPT
Sbjct: 405 --------ECPESLHDLMCQCWRKEPEERPTF 428
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 123/272 (45%), Gaps = 34/272 (12%)
Query: 78 LKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLV 137
+K+G+G FG V+ GT +G VA+K L G + +L E Q + + H LV
Sbjct: 24 VKLGQGCFGEVWMGT---WNGTTR---VAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLV 76
Query: 138 KLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLH 197
+L S E +V EYM L D L L +++ A G+AY+
Sbjct: 77 QLYAVVSEEP-----IYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE 131
Query: 198 EGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYI 257
+ ++RD + +N+L+ N K++DFGLAR ++T A + APE
Sbjct: 132 R---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI-KWTAPEAA 187
Query: 258 ETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTM-EQKLLEWVKQFPADGKKFSMMIDP 316
G +SD+WSFG++L E+ T RV P M +++L+ V+ + + M P
Sbjct: 188 LYGRFTIKSDVWSFGILLTELTTKGRV---PYPGMVNREVLDQVE------RGYRMPCPP 238
Query: 317 RLRNQYSINAARRVAKLADNCLKKNPEERPTM 348
+ L C +K+PEERPT
Sbjct: 239 --------ECPESLHDLMCQCWRKDPEERPTF 262
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 123/272 (45%), Gaps = 34/272 (12%)
Query: 78 LKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLV 137
+K+G+G FG V+ GT +G VA+K L G + +L E Q + + H LV
Sbjct: 21 VKLGQGCFGEVWMGT---WNGTTR---VAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLV 73
Query: 138 KLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLH 197
+L S E +V EYM SL D L L +++ A G+AY+
Sbjct: 74 QLYAVVSEEP-----IYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVE 128
Query: 198 EGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYI 257
+ ++RD + +N+L+ N K++DFGLAR ++T A + APE
Sbjct: 129 R---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI-KWTAPEAA 184
Query: 258 ETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTM-EQKLLEWVKQFPADGKKFSMMIDP 316
G +SD+WSFG++L E+ T RV P M +++L+ V+ + + M P
Sbjct: 185 LYGRFTIKSDVWSFGILLTELTTKGRV---PYPGMVNREVLDQVE------RGYRMPCPP 235
Query: 317 RLRNQYSINAARRVAKLADNCLKKNPEERPTM 348
+ L C +K PEERPT
Sbjct: 236 --------ECPESLHDLMCQCWRKEPEERPTF 259
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 105/223 (47%), Gaps = 20/223 (8%)
Query: 124 EVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRL 183
E Q ++HP +V + E G +V EY+ +L D + + P P K +
Sbjct: 62 EAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG-PMTP-KRAI 119
Query: 184 EIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLARE-GPTGDHTHVS 242
E+I A + L + H+ +I+RD K +N+++ K+ DFG+AR +G+ +
Sbjct: 120 EVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQT 176
Query: 243 TAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQ 302
AV+GT Y +PE + ++SD++S G VLYE+LTG + P + V++
Sbjct: 177 AAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPV--SVAYQHVRE 234
Query: 303 FPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEER 345
P I P R++ ++A L L KNPE R
Sbjct: 235 DP---------IPPSARHE-GLSADLDAVVL--KALAKNPENR 265
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 124/281 (44%), Gaps = 34/281 (12%)
Query: 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHK-QWLAEVQFLGVVSHPNLV 137
+IG G FG V+ G +R + +VAVK K ++L E + L SHPN+V
Sbjct: 121 QIGRGNFGEVFSGRLR-----ADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIV 175
Query: 138 KLLGYCSTEDERGIQRLLVYEYMPNRSLEDRL-FSRAQPT-LPWKTRLEIILGAAEGLAY 195
+L+G C+ Q+ +Y M D L F R + L KT L+++ AA G+ Y
Sbjct: 176 RLIGVCT-------QKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEY 228
Query: 196 LHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPE 255
L I+RD N L+ K+SDFG++RE G + APE
Sbjct: 229 LESKC---CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPE 285
Query: 256 YIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKFSMMID 315
+ G S+SD+WSFG++L+E + + P + + ++F G +
Sbjct: 286 ALNYGRYSSESDVWSFGILLWETFS---LGASPYPNLSNQQ---TREFVEKGGRLPC--- 336
Query: 316 PRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLK 356
P L V +L + C P +RP+ + + + L+
Sbjct: 337 PEL-------CPDAVFRLMEQCWAYEPGQRPSFSTIYQELQ 370
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 131/290 (45%), Gaps = 47/290 (16%)
Query: 73 GFNRMLK-IGEGGFGSVYKGTIRPLDGRGEPL-VVAVKKLNNHGLQGHKQWLAEVQFLGV 130
G R+LK IG+G F V K L G+ + ++ +LN+ LQ + EV+ + V
Sbjct: 14 GNYRLLKTIGKGNFAKV-KLARHILTGKEVAVKIIDKTQLNSSSLQ---KLFREVRIMKV 69
Query: 131 VSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQ-PTLPWKTRLEIILGA 189
++HPN+VKL TE LV EY + D L + + + + I+ A
Sbjct: 70 LNHPNIVKLFEVIETEK----TLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSA 125
Query: 190 AEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTY 249
+ Y H+ +++RD K N+LLD + K++DFG + E G+ A G
Sbjct: 126 VQ---YCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKL---DAFCGAP 176
Query: 250 GYAAPEYIETGHLKS-QSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGK 308
YAAPE + + D+WS GV+LY +++G P DG+
Sbjct: 177 PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG--------------------SLPFDGQ 216
Query: 309 KFSMMIDPRLRNQYSINAARRVAKLADNCLKK----NPEERPTMNQVVES 354
+ + LR +Y I ++ +N LKK NP +R T+ Q+++
Sbjct: 217 NLKELRERVLRGKYRI--PFYMSTDCENLLKKFLILNPSKRGTLEQIMKD 264
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 105/223 (47%), Gaps = 20/223 (8%)
Query: 124 EVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRL 183
E Q ++HP +V + E G +V EY+ +L D + + P P K +
Sbjct: 62 EAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG-PMTP-KRAI 119
Query: 184 EIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLARE-GPTGDHTHVS 242
E+I A + L + H+ +I+RD K +N+++ K+ DFG+AR +G+ +
Sbjct: 120 EVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQT 176
Query: 243 TAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQ 302
AV+GT Y +PE + ++SD++S G VLYE+LTG + P + V++
Sbjct: 177 AAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPV--SVAYQHVRE 234
Query: 303 FPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEER 345
P I P R++ ++A L L KNPE R
Sbjct: 235 DP---------IPPSARHE-GLSADLDAVVL--KALAKNPENR 265
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 109/219 (49%), Gaps = 18/219 (8%)
Query: 70 ATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKK--LNNHGLQGHKQWLAEVQF 127
+ F ++ KIGEG +G VYK + L G VVA+KK L+ + E+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNK-LTGE----VVALKKIRLDTETEGVPSTAIREISL 58
Query: 128 LGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIIL 187
L ++HPN+VKLL TE+ + LV+E++ + L+D + + A +P +
Sbjct: 59 LKELNHPNIVKLLDVIHTEN----KLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSYLF 113
Query: 188 GAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVG 247
+GLA+ H +V++RD K N+L++ KL+DFGLAR T+ V
Sbjct: 114 QLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-- 168
Query: 248 TYGYAAPE-YIETGHLKSQSDIWSFGVVLYEILTGRRVL 285
T Y APE + + + DIWS G + E++T R +
Sbjct: 169 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 207
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 131/317 (41%), Gaps = 50/317 (15%)
Query: 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG---LQGHKQWLAEVQFL 128
N + IGEG FG V++ L +VAVK L +Q Q E +
Sbjct: 47 NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQ--REAALM 104
Query: 129 GVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLED--------------------- 167
+PN+VKLLG C+ G L++EYM L +
Sbjct: 105 AEFDNPNIVKLLGVCAV----GKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTR 160
Query: 168 -RLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSD 226
R+ S P L +L I A G+AYL E + ++RD T N L+ N K++D
Sbjct: 161 ARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFVHRDLATRNCLVGENMVVKIAD 217
Query: 227 FGLAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLE 286
FGL+R + D+ + PE I ++SD+W++GVVL+EI + L+
Sbjct: 218 FGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFS--YGLQ 275
Query: 287 RNRPTMEQKLLEWVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERP 346
++++ +V+ DG +++ P N + L C K P +RP
Sbjct: 276 PYYGMAHEEVIYYVR----DG---NILACPE-------NCPLELYNLMRLCWSKLPADRP 321
Query: 347 TMNQVVESLKLAVQESE 363
+ + L+ + +E
Sbjct: 322 SFCSIHRILQRMCERAE 338
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 109/219 (49%), Gaps = 18/219 (8%)
Query: 70 ATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKK--LNNHGLQGHKQWLAEVQF 127
+ F ++ KIGEG +G VYK + L G VVA+KK L+ + E+
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNK-LTGE----VVALKKIRLDTETEGVPSTAIREISL 57
Query: 128 LGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIIL 187
L ++HPN+VKLL TE+ + LV+E++ + L+D + + A +P +
Sbjct: 58 LKELNHPNIVKLLDVIHTEN----KLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSYLF 112
Query: 188 GAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVG 247
+GLA+ H +V++RD K N+L++ KL+DFGLAR T+ V
Sbjct: 113 QLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-- 167
Query: 248 TYGYAAPE-YIETGHLKSQSDIWSFGVVLYEILTGRRVL 285
T Y APE + + + DIWS G + E++T R +
Sbjct: 168 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 206
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 129/293 (44%), Gaps = 32/293 (10%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNN-HGLQGHKQWLAEVQFLGVVSHPNLVK 138
+G G FG VY+G + + PL VAVK L + Q +L E + +H N+V+
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVR 112
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLEDRLF-SRAQPTLPWKTRLEIILGAAEGLA--- 194
+G + + R ++ E M L+ L +R +P+ P + +L A +A
Sbjct: 113 CIGV----SLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 168
Query: 195 -YLHEGLEIQVIYRDFKTSNVLLDG---NFKPKLSDFGLAREGPTGDHTHVSTAVVGTYG 250
YL E I+RD N LL K+ DFG+AR+ + +
Sbjct: 169 QYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 225
Query: 251 YAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKF 310
+ PE G S++D WSFGV+L+EI + + ++ Q++LE+V + G+
Sbjct: 226 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN--QEVLEFVT---SGGR-- 278
Query: 311 SMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQESE 363
+DP N V ++ C + PE+RP ++E ++ Q+ +
Sbjct: 279 ---MDP------PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPD 322
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 91/301 (30%), Positives = 127/301 (42%), Gaps = 46/301 (15%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWL-AEVQFLGVVS-HPNLV 137
+G G FG V + T L L VAVK L + K+ L +E++ + + H N+V
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 138 KLLGYCSTEDERGIQRLLVYEYM-----------PNRSLE-DRLFSRAQPTLPWKTRLEI 185
LLG C+ G L++ EY +R LE D F+ A TL + L
Sbjct: 114 NLLGACT----HGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHF 169
Query: 186 ILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAV 245
A+G+A+L I+RD NVLL K+ DFGLAR+ + V
Sbjct: 170 SSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNA 226
Query: 246 VGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERN---RPTMEQKLLEWVKQ 302
+ APE I QSD+WS+G++L+EI + L N + K + VK
Sbjct: 227 RLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS----LGLNPYPGILVNSKFYKLVK- 281
Query: 303 FPADGKKFSMMIDPRL--RNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQ 360
DG + M P +N YSI A C P RPT Q+ L+ Q
Sbjct: 282 ---DGYQ---MAQPAFAPKNIYSIMQA---------CWALEPTHRPTFQQICSFLQEQAQ 326
Query: 361 E 361
E
Sbjct: 327 E 327
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 122/273 (44%), Gaps = 34/273 (12%)
Query: 78 LKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLV 137
+K+G+G FG V+ GT +G VA+K L G + +L E Q + + H LV
Sbjct: 14 VKLGQGCFGEVWMGT---WNGTTR---VAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLV 66
Query: 138 KLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLH 197
+L S E +V EYM SL D L L +++ A G+AY+
Sbjct: 67 QLYAVVSEEP-----IXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE 121
Query: 198 EGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYI 257
+ ++RD + +N+L+ N K++DFGLAR + T A + APE
Sbjct: 122 R---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKF-PIKWTAPEAA 177
Query: 258 ETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTM-EQKLLEWVKQFPADGKKFSMMIDP 316
G +SD+WSFG++L E+ T RV P M +++L+ V+ + + M P
Sbjct: 178 LYGRFTIKSDVWSFGILLTELTTKGRV---PYPGMVNREVLDQVE------RGYRMPCPP 228
Query: 317 RLRNQYSINAARRVAKLADNCLKKNPEERPTMN 349
+ L C +K PEERPT
Sbjct: 229 --------ECPESLHDLMCQCWRKEPEERPTFE 253
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 117/234 (50%), Gaps = 18/234 (7%)
Query: 67 LREATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLN-NHGLQGHK----QW 121
L A + + +IGEG +G V+K R L G VA+K++ G +G +
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKA--RDLKNGGR--FVALKRVRVQTGEEGMPLSTIRE 61
Query: 122 LAEVQFLGVVSHPNLVKLLGYCS-TEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWK 180
+A ++ L HPN+V+L C+ + +R + LV+E++ ++ L L +P +P +
Sbjct: 62 VAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTE 120
Query: 181 TRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTH 240
T +++ GL +LH +V++RD K N+L+ + + KL+DFGLAR
Sbjct: 121 TIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLAR---IYSFQM 174
Query: 241 VSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQ 294
T+VV T Y APE + + D+WS G + E+ R+ L R ++Q
Sbjct: 175 ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR-RKPLFRGSSDVDQ 227
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 118/271 (43%), Gaps = 31/271 (11%)
Query: 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVK 138
K+G G FG V+ G VAVK L G + +L E + + H LV+
Sbjct: 19 KLGAGQFGEVWMGYYN------NSTKVAVKTLK-PGTMSVQAFLEEANLMKTLQHDKLVR 71
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHE 198
L + E+ I + E+M SL D L S + ++ AEG+AY+
Sbjct: 72 LYAVVTKEEPIYI----ITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIER 127
Query: 199 GLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIE 258
I+RD + +NVL+ + K++DFGLAR ++T A + APE I
Sbjct: 128 K---NYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPI-KWTAPEAIN 183
Query: 259 TGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKFSMMIDPRL 318
G +S++WSFG++LYEI+T ++ R + A + + M PR+
Sbjct: 184 FGCFTIKSNVWSFGILLYEIVTYGKIPYPGRTNAD--------VMSALSQGYRM---PRM 232
Query: 319 RNQYSINAARRVAKLADNCLKKNPEERPTMN 349
N + + C K+ EERPT +
Sbjct: 233 E-----NCPDELYDIMKMCWKEKAEERPTFD 258
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 105/223 (47%), Gaps = 20/223 (8%)
Query: 124 EVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRL 183
E Q ++HP +V + E G +V EY+ +L D + + P P K +
Sbjct: 79 EAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG-PMTP-KRAI 136
Query: 184 EIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLARE-GPTGDHTHVS 242
E+I A + L + H+ +I+RD K +N+++ K+ DFG+AR +G+ +
Sbjct: 137 EVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQT 193
Query: 243 TAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQ 302
AV+GT Y +PE + ++SD++S G VLYE+LTG + P + V++
Sbjct: 194 AAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPV--SVAYQHVRE 251
Query: 303 FPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEER 345
P I P R++ ++A L L KNPE R
Sbjct: 252 DP---------IPPSARHE-GLSADLDAVVL--KALAKNPENR 282
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 111/222 (50%), Gaps = 22/222 (9%)
Query: 69 EATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKK--LNNHGLQGHKQWLAEVQ 126
E F ++ KIGEG +G VYK + L G VVA+KK L+ + E+
Sbjct: 7 EFMENFQKVEKIGEGTYGVVYKARNK-LTGE----VVALKKIRLDTETEGVPSTAIREIS 61
Query: 127 FLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEII 186
L ++HPN+VKLL TE+ + LV+E++ ++ L+ + + A +P +
Sbjct: 62 LLKELNHPNIVKLLDVIHTEN----KLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYL 116
Query: 187 LGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREG--PTGDHTHVSTA 244
+GLA+ H +V++RD K N+L++ KL+DFGLAR P +TH
Sbjct: 117 FQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH---- 169
Query: 245 VVGTYGYAAPE-YIETGHLKSQSDIWSFGVVLYEILTGRRVL 285
V T Y APE + + + DIWS G + E++T R +
Sbjct: 170 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 211
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 128/280 (45%), Gaps = 32/280 (11%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLN-NHGLQGHKQWLAEVQFLGVVSHPNLVK 138
IG G FG V G ++ + G+ E + VA+K L + + + +L+E +G HPN++
Sbjct: 22 IGVGEFGEVCSGRLK-VPGKRE-ICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIH 79
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHE 198
L G + + +++ EYM N SL D + + ++ G G+ YL +
Sbjct: 80 LEGVVT----KCKPVMIITEYMENGSL-DAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSD 134
Query: 199 GLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAR---EGPTGDHTHVSTAVVGTYGYAAPE 255
+ ++RD N+L++ N K+SDFG++R + P +T + + APE
Sbjct: 135 ---MSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKI--PIRWTAPE 189
Query: 256 YIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKFSMMID 315
I S SD+WS+G+V++E+++ RP + + +K I+
Sbjct: 190 AIAYRKFTSASDVWSYGIVMWEVMS-----YGERPYWDMSNQDVIKA-----------IE 233
Query: 316 PRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESL 355
R ++ + +L +C +K +RP Q+V L
Sbjct: 234 EGYRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNML 273
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 129/293 (44%), Gaps = 32/293 (10%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNN-HGLQGHKQWLAEVQFLGVVSHPNLVK 138
+G G FG VY+G + + PL VAVK L Q +L E + ++H N+V+
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 98
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLEDRLF-SRAQPTLPWKTRLEIILGAAEGLA--- 194
+G + + R ++ E M L+ L +R +P+ P + +L A +A
Sbjct: 99 CIGV----SLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 154
Query: 195 -YLHEGLEIQVIYRDFKTSNVLLDG---NFKPKLSDFGLAREGPTGDHTHVSTAVVGTYG 250
YL E I+RD N LL K+ DFG+AR+ + +
Sbjct: 155 QYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 211
Query: 251 YAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKF 310
+ PE G S++D WSFGV+L+EI + + ++ Q++LE+V + G+
Sbjct: 212 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN--QEVLEFVT---SGGR-- 264
Query: 311 SMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQESE 363
+DP N V ++ C + PE+RP ++E ++ Q+ +
Sbjct: 265 ---MDP------PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPD 308
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 117/234 (50%), Gaps = 18/234 (7%)
Query: 67 LREATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLN-NHGLQGHK----QW 121
L A + + +IGEG +G V+K R L G VA+K++ G +G +
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKA--RDLKNGGR--FVALKRVRVQTGEEGMPLSTIRE 61
Query: 122 LAEVQFLGVVSHPNLVKLLGYCS-TEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWK 180
+A ++ L HPN+V+L C+ + +R + LV+E++ ++ L L +P +P +
Sbjct: 62 VAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTE 120
Query: 181 TRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTH 240
T +++ GL +LH +V++RD K N+L+ + + KL+DFGLAR
Sbjct: 121 TIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLAR---IYSFQM 174
Query: 241 VSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQ 294
T+VV T Y APE + + D+WS G + E+ R+ L R ++Q
Sbjct: 175 ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR-RKPLFRGSSDVDQ 227
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 128/280 (45%), Gaps = 32/280 (11%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLN-NHGLQGHKQWLAEVQFLGVVSHPNLVK 138
IG G FG V G ++ + G+ E + VA+K L + + + +L+E +G HPN++
Sbjct: 16 IGVGEFGEVCSGRLK-VPGKRE-ICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIH 73
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHE 198
L G + + +++ EYM N SL D + + ++ G G+ YL +
Sbjct: 74 LEGVVT----KCKPVMIITEYMENGSL-DAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSD 128
Query: 199 GLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAR---EGPTGDHTHVSTAVVGTYGYAAPE 255
+ ++RD N+L++ N K+SDFG++R + P +T + + APE
Sbjct: 129 ---MSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKI--PIRWTAPE 183
Query: 256 YIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKFSMMID 315
I S SD+WS+G+V++E+++ RP + + +K I+
Sbjct: 184 AIAYRKFTSASDVWSYGIVMWEVMS-----YGERPYWDMSNQDVIKA-----------IE 227
Query: 316 PRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESL 355
R ++ + +L +C +K +RP Q+V L
Sbjct: 228 EGYRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNML 267
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 128/293 (43%), Gaps = 32/293 (10%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNN-HGLQGHKQWLAEVQFLGVVSHPNLVK 138
+G G FG VY+G + + PL VAVK L Q +L E + +H N+V+
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 124
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLEDRLF-SRAQPTLPWKTRLEIILGAAEGLA--- 194
+G + + R ++ E M L+ L +R +P+ P + +L A +A
Sbjct: 125 CIGV----SLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 180
Query: 195 -YLHEGLEIQVIYRDFKTSNVLLDG---NFKPKLSDFGLAREGPTGDHTHVSTAVVGTYG 250
YL E I+RD N LL K+ DFG+AR+ + +
Sbjct: 181 QYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 237
Query: 251 YAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKF 310
+ PE G S++D WSFGV+L+EI + + ++ Q++LE+V + G+
Sbjct: 238 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN--QEVLEFVT---SGGR-- 290
Query: 311 SMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQESE 363
+DP N V ++ C + PE+RP ++E ++ Q+ +
Sbjct: 291 ---MDP------PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPD 334
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 111/222 (50%), Gaps = 22/222 (9%)
Query: 69 EATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKK--LNNHGLQGHKQWLAEVQ 126
E F ++ KIGEG +G VYK + L G VVA+KK L+ + E+
Sbjct: 7 EFMENFQKVEKIGEGTYGVVYKARNK-LTGE----VVALKKIRLDTETEGVPSTAIREIS 61
Query: 127 FLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEII 186
L ++HPN+VKLL TE+ + LV+E++ ++ L+ + + A +P +
Sbjct: 62 LLKELNHPNIVKLLDVIHTEN----KLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYL 116
Query: 187 LGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREG--PTGDHTHVSTA 244
+GLA+ H +V++RD K N+L++ KL+DFGLAR P +TH
Sbjct: 117 FQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH---- 169
Query: 245 VVGTYGYAAPE-YIETGHLKSQSDIWSFGVVLYEILTGRRVL 285
V T Y APE + + + DIWS G + E++T R +
Sbjct: 170 EVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALF 211
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 129/293 (44%), Gaps = 32/293 (10%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNN-HGLQGHKQWLAEVQFLGVVSHPNLVK 138
+G G FG VY+G + + PL VAVK L Q +L E + ++H N+V+
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 112
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLEDRLF-SRAQPTLPWKTRLEIILGAAEGLA--- 194
+G + + R ++ E M L+ L +R +P+ P + +L A +A
Sbjct: 113 CIGV----SLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 168
Query: 195 -YLHEGLEIQVIYRDFKTSNVLLDG---NFKPKLSDFGLAREGPTGDHTHVSTAVVGTYG 250
YL E I+RD N LL K+ DFG+AR+ + +
Sbjct: 169 QYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 225
Query: 251 YAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKF 310
+ PE G S++D WSFGV+L+EI + + ++ Q++LE+V + G+
Sbjct: 226 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN--QEVLEFVT---SGGR-- 278
Query: 311 SMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQESE 363
+DP N V ++ C + PE+RP ++E ++ Q+ +
Sbjct: 279 ---MDP------PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPD 322
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 142/291 (48%), Gaps = 42/291 (14%)
Query: 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQG--HKQWLAEVQFLG 129
+ F ++ ++G G G V+K + +P +V +KL + ++ Q + E+Q L
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSG------LVMARKLIHLEIKPAIRNQIIRELQVLH 59
Query: 130 VVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGA 189
+ P +V G ++ E I E+M SL D++ +A +P + ++ +
Sbjct: 60 ECNSPYIVGFYGAFYSDGEISI----CMEHMDGGSL-DQVLKKAG-RIPEQILGKVSIAV 113
Query: 190 AEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTY 249
+GL YL E + ++++RD K SN+L++ + KL DFG++ G D ++ + VGT
Sbjct: 114 IKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--MANSFVGTR 167
Query: 250 GYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVL------ERNRPTMEQ-KLLEWVKQ 302
Y +PE ++ H QSDIWS G+ L E+ GR + E +RP M +LL+++
Sbjct: 168 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEDSRPPMAIFELLDYIVN 227
Query: 303 FPADGKKFSMMIDPRL-RNQYSINAARRVAKLADNCLKKNPEERPTMNQVV 352
P P+L +S+ V K CL KNP ER + Q++
Sbjct: 228 EPP----------PKLPSGVFSLEFQDFVNK----CLIKNPAERADLKQLM 264
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 110/217 (50%), Gaps = 22/217 (10%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKK--LNNHGLQGHKQWLAEVQFLGVV 131
F ++ KIGEG +G VYK + L G VVA+KK L+ + E+ L +
Sbjct: 5 FQKVEKIGEGTYGVVYKARNK-LTGE----VVALKKIRLDTETEGVPSTAIREISLLKEL 59
Query: 132 SHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAE 191
+HPN+VKLL TE+ + LV+E++ ++ L+ + + A +P + +
Sbjct: 60 NHPNIVKLLDVIHTEN----KLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQ 114
Query: 192 GLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREG--PTGDHTHVSTAVVGTY 249
GLA+ H +V++RD K N+L++ KL+DFGLAR P +TH V T
Sbjct: 115 GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH----EVVTL 167
Query: 250 GYAAPE-YIETGHLKSQSDIWSFGVVLYEILTGRRVL 285
Y APE + + + DIWS G + E++T R +
Sbjct: 168 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 204
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 110/217 (50%), Gaps = 22/217 (10%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKK--LNNHGLQGHKQWLAEVQFLGVV 131
F ++ KIGEG +G VYK + L G VVA+KK L+ + E+ L +
Sbjct: 4 FQKVEKIGEGTYGVVYKARNK-LTGE----VVALKKIRLDTETEGVPSTAIREISLLKEL 58
Query: 132 SHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAE 191
+HPN+VKLL TE+ + LV+E++ ++ L+ + + A +P + +
Sbjct: 59 NHPNIVKLLDVIHTEN----KLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQ 113
Query: 192 GLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREG--PTGDHTHVSTAVVGTY 249
GLA+ H +V++RD K N+L++ KL+DFGLAR P +TH V T
Sbjct: 114 GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH----EVVTL 166
Query: 250 GYAAPE-YIETGHLKSQSDIWSFGVVLYEILTGRRVL 285
Y APE + + + DIWS G + E++T R +
Sbjct: 167 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 203
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 110/217 (50%), Gaps = 22/217 (10%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKK--LNNHGLQGHKQWLAEVQFLGVV 131
F ++ KIGEG +G VYK + L G VVA+KK L+ + E+ L +
Sbjct: 4 FQKVEKIGEGTYGVVYKARNK-LTGE----VVALKKIRLDTETEGVPSTAIREISLLKEL 58
Query: 132 SHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAE 191
+HPN+VKLL TE+ + LV+E++ ++ L+ + + A +P + +
Sbjct: 59 NHPNIVKLLDVIHTEN----KLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQ 113
Query: 192 GLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREG--PTGDHTHVSTAVVGTY 249
GLA+ H +V++RD K N+L++ KL+DFGLAR P +TH V T
Sbjct: 114 GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH----EVVTL 166
Query: 250 GYAAPE-YIETGHLKSQSDIWSFGVVLYEILTGRRVL 285
Y APE + + + DIWS G + E++T R +
Sbjct: 167 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 203
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 128/293 (43%), Gaps = 32/293 (10%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNN-HGLQGHKQWLAEVQFLGVVSHPNLVK 138
+G G FG VY+G + + PL VAVK L Q +L E + +H N+V+
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 114
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLEDRLF-SRAQPTLPWKTRLEIILGAAEGLA--- 194
+G + + R ++ E M L+ L +R +P+ P + +L A +A
Sbjct: 115 CIGV----SLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 170
Query: 195 -YLHEGLEIQVIYRDFKTSNVLLDG---NFKPKLSDFGLAREGPTGDHTHVSTAVVGTYG 250
YL E I+RD N LL K+ DFG+AR+ + +
Sbjct: 171 QYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 227
Query: 251 YAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKF 310
+ PE G S++D WSFGV+L+EI + + ++ Q++LE+V + G+
Sbjct: 228 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN--QEVLEFVT---SGGR-- 280
Query: 311 SMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQESE 363
+DP N V ++ C + PE+RP ++E ++ Q+ +
Sbjct: 281 ---MDP------PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPD 324
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 116/273 (42%), Gaps = 42/273 (15%)
Query: 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVK 138
K+G G FG V+ T + VAVK + G + +LAE + + H LVK
Sbjct: 189 KLGAGQFGEVWMATY------NKHTKVAVKTMKP-GSMSVEAFLAEANVMKTLQHDKLVK 241
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHE 198
L + E ++ E+M SL D L S P ++ AEG+A++ +
Sbjct: 242 LHAVVTKE-----PIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQ 296
Query: 199 GLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIE 258
I+RD + +N+L+ + K++DFGLAR G + APE I
Sbjct: 297 R---NYIHRDLRAANILVSASLVCKIADFGLARVGAKF-----------PIKWTAPEAIN 342
Query: 259 TGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKFSMMIDPRL 318
G +SD+WSFG++L EI+T R+ P M + A + + M PR
Sbjct: 343 FGSFTIKSDVWSFGILLMEIVTYGRI---PYPGMSNP-----EVIRALERGYRM---PRP 391
Query: 319 RNQYSINAARRVAKLADNCLKKNPEERPTMNQV 351
N + + C K PEERPT +
Sbjct: 392 E-----NCPEELYNIMMRCWKNRPEERPTFEYI 419
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 131/290 (45%), Gaps = 47/290 (16%)
Query: 73 GFNRMLK-IGEGGFGSVYKGTIRPLDGRGEPL-VVAVKKLNNHGLQGHKQWLAEVQFLGV 130
G R+LK IG+G F V K L G+ + ++ +LN+ LQ + EV+ + V
Sbjct: 14 GNYRLLKTIGKGNFAKV-KLARHILTGKEVAVRIIDKTQLNSSSLQ---KLFREVRIMKV 69
Query: 131 VSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQ-PTLPWKTRLEIILGA 189
++HPN+VKL TE LV EY + D L + + + + I+ A
Sbjct: 70 LNHPNIVKLFEVIETEK----TLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSA 125
Query: 190 AEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTY 249
+ Y H+ +++RD K N+LLD + K++DFG + E G+ G+
Sbjct: 126 VQ---YCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKL---DTFCGSP 176
Query: 250 GYAAPEYIETGHLKS-QSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGK 308
YAAPE + + D+WS GV+LY +++G P DG+
Sbjct: 177 PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG--------------------SLPFDGQ 216
Query: 309 KFSMMIDPRLRNQYSINAARRVAKLADNCLKK----NPEERPTMNQVVES 354
+ + LR +Y I ++ +N LKK NP +R T+ Q+++
Sbjct: 217 NLKELRERVLRGKYRI--PFYMSTDCENLLKKFLILNPSKRGTLEQIMKD 264
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 128/293 (43%), Gaps = 32/293 (10%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNN-HGLQGHKQWLAEVQFLGVVSHPNLVK 138
+G G FG VY+G + + PL VAVK L Q +L E + +H N+V+
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLEDRLF-SRAQPTLPWKTRLEIILGAAEGLA--- 194
+G + + R ++ E M L+ L +R +P+ P + +L A +A
Sbjct: 99 CIGV----SLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 154
Query: 195 -YLHEGLEIQVIYRDFKTSNVLLDG---NFKPKLSDFGLAREGPTGDHTHVSTAVVGTYG 250
YL E I+RD N LL K+ DFG+AR+ + +
Sbjct: 155 QYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 211
Query: 251 YAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKF 310
+ PE G S++D WSFGV+L+EI + + ++ Q++LE+V + G+
Sbjct: 212 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN--QEVLEFVT---SGGR-- 264
Query: 311 SMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQESE 363
+DP N V ++ C + PE+RP ++E ++ Q+ +
Sbjct: 265 ---MDP------PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPD 308
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 110/217 (50%), Gaps = 22/217 (10%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKK--LNNHGLQGHKQWLAEVQFLGVV 131
F ++ KIGEG +G VYK + L G VVA+KK L+ + E+ L +
Sbjct: 9 FQKVEKIGEGTYGVVYKARNK-LTGE----VVALKKIRLDTETEGVPSTAIREISLLKEL 63
Query: 132 SHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAE 191
+HPN+VKLL TE+ + LV+E++ ++ L+ + + A +P + +
Sbjct: 64 NHPNIVKLLDVIHTEN----KLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQ 118
Query: 192 GLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREG--PTGDHTHVSTAVVGTY 249
GLA+ H +V++RD K N+L++ KL+DFGLAR P +TH V T
Sbjct: 119 GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH----EVVTL 171
Query: 250 GYAAPE-YIETGHLKSQSDIWSFGVVLYEILTGRRVL 285
Y APE + + + DIWS G + E++T R +
Sbjct: 172 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 208
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 128/293 (43%), Gaps = 32/293 (10%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNN-HGLQGHKQWLAEVQFLGVVSHPNLVK 138
+G G FG VY+G + + PL VAVK L Q +L E + +H N+V+
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLEDRLF-SRAQPTLPWKTRLEIILGAAEGLA--- 194
+G + + R ++ E M L+ L +R +P+ P + +L A +A
Sbjct: 98 CIGV----SLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 153
Query: 195 -YLHEGLEIQVIYRDFKTSNVLLDG---NFKPKLSDFGLAREGPTGDHTHVSTAVVGTYG 250
YL E I+RD N LL K+ DFG+AR+ + +
Sbjct: 154 QYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 210
Query: 251 YAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKF 310
+ PE G S++D WSFGV+L+EI + + ++ Q++LE+V + G+
Sbjct: 211 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN--QEVLEFVT---SGGR-- 263
Query: 311 SMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQESE 363
+DP N V ++ C + PE+RP ++E ++ Q+ +
Sbjct: 264 ---MDP------PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPD 307
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 117/234 (50%), Gaps = 18/234 (7%)
Query: 67 LREATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLN-NHGLQGHK----QW 121
L A + + +IGEG +G V+K R L G VA+K++ G +G +
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKA--RDLKNGGR--FVALKRVRVQTGEEGMPLSTIRE 61
Query: 122 LAEVQFLGVVSHPNLVKLLGYCS-TEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWK 180
+A ++ L HPN+V+L C+ + +R + LV+E++ ++ L L +P +P +
Sbjct: 62 VAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTE 120
Query: 181 TRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTH 240
T +++ GL +LH +V++RD K N+L+ + + KL+DFGLAR
Sbjct: 121 TIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLAR---IYSFQM 174
Query: 241 VSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQ 294
T+VV T Y APE + + D+WS G + E+ R+ L R ++Q
Sbjct: 175 ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR-RKPLFRGSSDVDQ 227
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 131/290 (45%), Gaps = 47/290 (16%)
Query: 73 GFNRMLK-IGEGGFGSVYKGTIRPLDGRGEPL-VVAVKKLNNHGLQGHKQWLAEVQFLGV 130
G R+LK IG+G F V K L G+ + ++ +LN+ LQ + EV+ + V
Sbjct: 14 GNYRLLKTIGKGNFAKV-KLARHILTGKEVAVKIIDKTQLNSSSLQ---KLFREVRIMKV 69
Query: 131 VSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQ-PTLPWKTRLEIILGA 189
++HPN+VKL TE LV EY + D L + + + + I+ A
Sbjct: 70 LNHPNIVKLFEVIETEK----TLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSA 125
Query: 190 AEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTY 249
+ Y H+ +++RD K N+LLD + K++DFG + E G+ G+
Sbjct: 126 VQ---YCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKL---DTFCGSP 176
Query: 250 GYAAPEYIETGHLKS-QSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGK 308
YAAPE + + D+WS GV+LY +++G P DG+
Sbjct: 177 PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG--------------------SLPFDGQ 216
Query: 309 KFSMMIDPRLRNQYSINAARRVAKLADNCLKK----NPEERPTMNQVVES 354
+ + LR +Y I ++ +N LKK NP +R T+ Q+++
Sbjct: 217 NLKELRERVLRGKYRI--PFYMSTDCENLLKKFLILNPSKRGTLEQIMKD 264
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 128/293 (43%), Gaps = 32/293 (10%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNN-HGLQGHKQWLAEVQFLGVVSHPNLVK 138
+G G FG VY+G + + PL VAVK L Q +L E + +H N+V+
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 104
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLEDRLF-SRAQPTLPWKTRLEIILGAAEGLA--- 194
+G + + R ++ E M L+ L +R +P+ P + +L A +A
Sbjct: 105 CIGV----SLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 160
Query: 195 -YLHEGLEIQVIYRDFKTSNVLLDG---NFKPKLSDFGLAREGPTGDHTHVSTAVVGTYG 250
YL E I+RD N LL K+ DFG+AR+ + +
Sbjct: 161 QYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 217
Query: 251 YAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKF 310
+ PE G S++D WSFGV+L+EI + + ++ Q++LE+V + G+
Sbjct: 218 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN--QEVLEFVT---SGGR-- 270
Query: 311 SMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQESE 363
+DP N V ++ C + PE+RP ++E ++ Q+ +
Sbjct: 271 ---MDP------PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPD 314
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 111/221 (50%), Gaps = 22/221 (9%)
Query: 70 ATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKK--LNNHGLQGHKQWLAEVQF 127
+ F ++ KIGEG +G VYK + L G VVA+KK L+ + E+
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNK-LTGE----VVALKKIRLDTETEGVPSTAIREISL 56
Query: 128 LGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIIL 187
L ++HPN+VKLL TE+ + LV+E++ ++ L+ + + A +P +
Sbjct: 57 LKELNHPNIVKLLDVIHTEN----KLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 111
Query: 188 GAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREG--PTGDHTHVSTAV 245
+GLA+ H +V++RD K N+L++ KL+DFGLAR P +TH
Sbjct: 112 QLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH----E 164
Query: 246 VGTYGYAAPE-YIETGHLKSQSDIWSFGVVLYEILTGRRVL 285
V T Y APE + + + DIWS G + E++T R +
Sbjct: 165 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 205
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 131/290 (45%), Gaps = 47/290 (16%)
Query: 73 GFNRMLK-IGEGGFGSVYKGTIRPLDGRGEPL-VVAVKKLNNHGLQGHKQWLAEVQFLGV 130
G R+LK IG+G F V K L G+ + ++ +LN+ LQ + EV+ + V
Sbjct: 14 GNYRLLKTIGKGNFAKV-KLARHILTGKEVAVKIIDKTQLNSSSLQ---KLFREVRIMKV 69
Query: 131 VSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQ-PTLPWKTRLEIILGA 189
++HPN+VKL TE LV EY + D L + + + + I+ A
Sbjct: 70 LNHPNIVKLFEVIETEK----TLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSA 125
Query: 190 AEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTY 249
+ Y H+ +++RD K N+LLD + K++DFG + E G+ G+
Sbjct: 126 VQ---YCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKL---DTFCGSP 176
Query: 250 GYAAPEYIETGHLKS-QSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGK 308
YAAPE + + D+WS GV+LY +++G P DG+
Sbjct: 177 PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG--------------------SLPFDGQ 216
Query: 309 KFSMMIDPRLRNQYSINAARRVAKLADNCLKK----NPEERPTMNQVVES 354
+ + LR +Y I ++ +N LKK NP +R T+ Q+++
Sbjct: 217 NLKELRERVLRGKYRI--PFYMSTDCENLLKKFLILNPSKRGTLEQIMKD 264
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 110/217 (50%), Gaps = 22/217 (10%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKK--LNNHGLQGHKQWLAEVQFLGVV 131
F ++ KIGEG +G VYK + L G VVA+KK L+ + E+ L +
Sbjct: 5 FQKVEKIGEGTYGVVYKARNK-LTGE----VVALKKIRLDTETEGVPSTAIREISLLKEL 59
Query: 132 SHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAE 191
+HPN+VKLL TE+ + LV+E++ ++ L+ + + A +P + +
Sbjct: 60 NHPNIVKLLDVIHTEN----KLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQ 114
Query: 192 GLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREG--PTGDHTHVSTAVVGTY 249
GLA+ H +V++RD K N+L++ KL+DFGLAR P +TH V T
Sbjct: 115 GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH----EVVTL 167
Query: 250 GYAAPE-YIETGHLKSQSDIWSFGVVLYEILTGRRVL 285
Y APE + + + DIWS G + E++T R +
Sbjct: 168 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 204
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 128/293 (43%), Gaps = 32/293 (10%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNN-HGLQGHKQWLAEVQFLGVVSHPNLVK 138
+G G FG VY+G + + PL VAVK L Q +L E + +H N+V+
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 112
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLEDRLF-SRAQPTLPWKTRLEIILGAAEGLA--- 194
+G + + R ++ E M L+ L +R +P+ P + +L A +A
Sbjct: 113 CIGV----SLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 168
Query: 195 -YLHEGLEIQVIYRDFKTSNVLLDG---NFKPKLSDFGLAREGPTGDHTHVSTAVVGTYG 250
YL E I+RD N LL K+ DFG+AR+ + +
Sbjct: 169 QYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 225
Query: 251 YAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKF 310
+ PE G S++D WSFGV+L+EI + + ++ Q++LE+V + G+
Sbjct: 226 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN--QEVLEFVT---SGGR-- 278
Query: 311 SMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQESE 363
+DP N V ++ C + PE+RP ++E ++ Q+ +
Sbjct: 279 ---MDP------PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPD 322
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 123/272 (45%), Gaps = 34/272 (12%)
Query: 78 LKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLV 137
+K+G+G FG V+ GT +G VA+K L G + +L E Q + + H LV
Sbjct: 191 VKLGQGCFGEVWMGT---WNGTTR---VAIKTLKP-GNMSPEAFLQEAQVMKKLRHEKLV 243
Query: 138 KLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLH 197
+L S E +V EYM SL D L L +++ A G+AY+
Sbjct: 244 QLYAVVSEEP-----IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE 298
Query: 198 EGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYI 257
+ ++RD + +N+L+ N K++DFGL R ++T A + APE
Sbjct: 299 R---MNYVHRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPI-KWTAPEAA 354
Query: 258 ETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTM-EQKLLEWVKQFPADGKKFSMMIDP 316
G +SD+WSFG++L E+ T RV P M +++L+ V+ + + M P
Sbjct: 355 LYGRFTIKSDVWSFGILLTELTTKGRV---PYPGMVNREVLDQVE------RGYRMPCPP 405
Query: 317 RLRNQYSINAARRVAKLADNCLKKNPEERPTM 348
+ L C +K+PEERPT
Sbjct: 406 --------ECPESLHDLMCQCWRKDPEERPTF 429
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 110/217 (50%), Gaps = 22/217 (10%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKK--LNNHGLQGHKQWLAEVQFLGVV 131
F ++ KIGEG +G VYK + L G VVA+KK L+ + E+ L +
Sbjct: 5 FQKVEKIGEGTYGVVYKARNK-LTGE----VVALKKIRLDTETEGVPSTAIREISLLKEL 59
Query: 132 SHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAE 191
+HPN+VKLL TE+ + LV+E++ ++ L+ + + A +P + +
Sbjct: 60 NHPNIVKLLDVIHTEN----KLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQ 114
Query: 192 GLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREG--PTGDHTHVSTAVVGTY 249
GLA+ H +V++RD K N+L++ KL+DFGLAR P +TH V T
Sbjct: 115 GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH----EVVTL 167
Query: 250 GYAAPE-YIETGHLKSQSDIWSFGVVLYEILTGRRVL 285
Y APE + + + DIWS G + E++T R +
Sbjct: 168 WYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALF 204
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 128/293 (43%), Gaps = 32/293 (10%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNN-HGLQGHKQWLAEVQFLGVVSHPNLVK 138
+G G FG VY+G + + PL VAVK L Q +L E + +H N+V+
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLEDRLF-SRAQPTLPWKTRLEIILGAAEGLA--- 194
+G + + R ++ E M L+ L +R +P+ P + +L A +A
Sbjct: 98 CIGV----SLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 153
Query: 195 -YLHEGLEIQVIYRDFKTSNVLLDG---NFKPKLSDFGLAREGPTGDHTHVSTAVVGTYG 250
YL E I+RD N LL K+ DFG+AR+ + +
Sbjct: 154 QYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 210
Query: 251 YAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKF 310
+ PE G S++D WSFGV+L+EI + + ++ Q++LE+V + G+
Sbjct: 211 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN--QEVLEFVT---SGGR-- 263
Query: 311 SMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQESE 363
+DP N V ++ C + PE+RP ++E ++ Q+ +
Sbjct: 264 ---MDP------PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPD 307
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 128/293 (43%), Gaps = 32/293 (10%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNN-HGLQGHKQWLAEVQFLGVVSHPNLVK 138
+G G FG VY+G + + PL VAVK L Q +L E + +H N+V+
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 89
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLEDRLF-SRAQPTLPWKTRLEIILGAAEGLA--- 194
+G + + R ++ E M L+ L +R +P+ P + +L A +A
Sbjct: 90 CIGV----SLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 145
Query: 195 -YLHEGLEIQVIYRDFKTSNVLLDG---NFKPKLSDFGLAREGPTGDHTHVSTAVVGTYG 250
YL E I+RD N LL K+ DFG+AR+ + +
Sbjct: 146 QYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 202
Query: 251 YAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKF 310
+ PE G S++D WSFGV+L+EI + + ++ Q++LE+V + G+
Sbjct: 203 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN--QEVLEFVT---SGGR-- 255
Query: 311 SMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQESE 363
+DP N V ++ C + PE+RP ++E ++ Q+ +
Sbjct: 256 ---MDP------PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPD 299
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 122/272 (44%), Gaps = 34/272 (12%)
Query: 78 LKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLV 137
+K+G+G FG V+ GT +G VA+K L G + +L E Q + + H LV
Sbjct: 21 VKLGQGCFGEVWMGT---WNGTTR---VAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLV 73
Query: 138 KLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLH 197
+L S E +V EYM SL D L L +++ A G+AY+
Sbjct: 74 QLYAVVSEEP-----IYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVE 128
Query: 198 EGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYI 257
+ ++RD + +N+L+ N K++DFGLAR + T A + APE
Sbjct: 129 R---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPI-KWTAPEAA 184
Query: 258 ETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTM-EQKLLEWVKQFPADGKKFSMMIDP 316
G +SD+WSFG++L E+ T RV P M +++L+ V+ + + M P
Sbjct: 185 LYGRFTIKSDVWSFGILLTELTTKGRV---PYPGMVNREVLDQVE------RGYRMPCPP 235
Query: 317 RLRNQYSINAARRVAKLADNCLKKNPEERPTM 348
+ L C +K PEERPT
Sbjct: 236 --------ECPESLHDLMCQCWRKEPEERPTF 259
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 128/293 (43%), Gaps = 32/293 (10%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNN-HGLQGHKQWLAEVQFLGVVSHPNLVK 138
+G G FG VY+G + + PL VAVK L Q +L E + +H N+V+
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 138
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLEDRLF-SRAQPTLPWKTRLEIILGAAEGLA--- 194
+G + + R ++ E M L+ L +R +P+ P + +L A +A
Sbjct: 139 CIGV----SLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 194
Query: 195 -YLHEGLEIQVIYRDFKTSNVLLDG---NFKPKLSDFGLAREGPTGDHTHVSTAVVGTYG 250
YL E I+RD N LL K+ DFG+AR+ + +
Sbjct: 195 QYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVK 251
Query: 251 YAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKF 310
+ PE G S++D WSFGV+L+EI + + ++ Q++LE+V + G+
Sbjct: 252 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN--QEVLEFVT---SGGR-- 304
Query: 311 SMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQESE 363
+DP N V ++ C + PE+RP ++E ++ Q+ +
Sbjct: 305 ---MDP------PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPD 348
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 131/290 (45%), Gaps = 47/290 (16%)
Query: 73 GFNRMLK-IGEGGFGSVYKGTIRPLDGRGEPL-VVAVKKLNNHGLQGHKQWLAEVQFLGV 130
G R+LK IG+G F V K L G+ + ++ +LN+ LQ + EV+ + V
Sbjct: 14 GNYRLLKTIGKGNFAKV-KLARHILTGKEVAVRIIDKTQLNSSSLQ---KLFREVRIMKV 69
Query: 131 VSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQ-PTLPWKTRLEIILGA 189
++HPN+VKL TE LV EY + D L + + + + I+ A
Sbjct: 70 LNHPNIVKLFEVIETEK----TLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSA 125
Query: 190 AEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTY 249
+ Y H+ +++RD K N+LLD + K++DFG + E G+ G+
Sbjct: 126 VQ---YCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKL---DEFCGSP 176
Query: 250 GYAAPEYIETGHLKS-QSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGK 308
YAAPE + + D+WS GV+LY +++G P DG+
Sbjct: 177 PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG--------------------SLPFDGQ 216
Query: 309 KFSMMIDPRLRNQYSINAARRVAKLADNCLKK----NPEERPTMNQVVES 354
+ + LR +Y I ++ +N LKK NP +R T+ Q+++
Sbjct: 217 NLKELRERVLRGKYRI--PFYMSTDCENLLKKFLILNPSKRGTLEQIMKD 264
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 128/293 (43%), Gaps = 32/293 (10%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNN-HGLQGHKQWLAEVQFLGVVSHPNLVK 138
+G G FG VY+G + + PL VAVK L Q +L E + +H N+V+
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 115
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLEDRLF-SRAQPTLPWKTRLEIILGAAEGLA--- 194
+G + + R ++ E M L+ L +R +P+ P + +L A +A
Sbjct: 116 CIGV----SLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 171
Query: 195 -YLHEGLEIQVIYRDFKTSNVLLDG---NFKPKLSDFGLAREGPTGDHTHVSTAVVGTYG 250
YL E I+RD N LL K+ DFG+AR+ + +
Sbjct: 172 QYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVK 228
Query: 251 YAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKF 310
+ PE G S++D WSFGV+L+EI + + ++ Q++LE+V + G+
Sbjct: 229 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN--QEVLEFVT---SGGR-- 281
Query: 311 SMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQESE 363
+DP N V ++ C + PE+RP ++E ++ Q+ +
Sbjct: 282 ---MDP------PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPD 325
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 109/219 (49%), Gaps = 18/219 (8%)
Query: 70 ATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKK--LNNHGLQGHKQWLAEVQF 127
+ F ++ KIGEG +G VYK + L G VVA+KK L+ + E+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNK-LTGE----VVALKKIRLDTETEGVPSTAIREISL 55
Query: 128 LGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIIL 187
L ++HPN+VKLL TE+ + LV+E++ ++ L+ + + A +P +
Sbjct: 56 LKELNHPNIVKLLDVIHTEN----KLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 110
Query: 188 GAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVG 247
+GLA+ H +V++RD K N+L++ KL+DFGLAR T+ V
Sbjct: 111 QLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-- 165
Query: 248 TYGYAAPE-YIETGHLKSQSDIWSFGVVLYEILTGRRVL 285
T Y APE + + + DIWS G + E++T R +
Sbjct: 166 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 204
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 109/219 (49%), Gaps = 18/219 (8%)
Query: 70 ATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKK--LNNHGLQGHKQWLAEVQF 127
+ F ++ KIGEG +G VYK + L G VVA+KK L+ + E+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNK-LTGE----VVALKKIRLDTETEGVPSTAIREISL 55
Query: 128 LGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIIL 187
L ++HPN+VKLL TE+ + LV+E++ ++ L+ + + A +P +
Sbjct: 56 LKELNHPNIVKLLDVIHTEN----KLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 110
Query: 188 GAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVG 247
+GLA+ H +V++RD K N+L++ KL+DFGLAR T+ V
Sbjct: 111 QLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-- 165
Query: 248 TYGYAAPE-YIETGHLKSQSDIWSFGVVLYEILTGRRVL 285
T Y APE + + + DIWS G + E++T R +
Sbjct: 166 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 204
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 108/215 (50%), Gaps = 18/215 (8%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKK--LNNHGLQGHKQWLAEVQFLGVV 131
F ++ KIGEG +G VYK + L G VVA+KK L+ + E+ L +
Sbjct: 4 FQKVEKIGEGTYGVVYKARNK-LTGE----VVALKKIRLDTETEGVPSTAIREISLLKEL 58
Query: 132 SHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAE 191
+HPN+VKLL TE+ + LV+E++ ++ L+ + + A +P + +
Sbjct: 59 NHPNIVKLLDVIHTEN----KLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQ 113
Query: 192 GLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGY 251
GLA+ H +V++RD K N+L++ KL+DFGLAR T+ V T Y
Sbjct: 114 GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWY 168
Query: 252 AAPE-YIETGHLKSQSDIWSFGVVLYEILTGRRVL 285
APE + + + DIWS G + E++T R +
Sbjct: 169 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 203
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 109/219 (49%), Gaps = 18/219 (8%)
Query: 70 ATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKK--LNNHGLQGHKQWLAEVQF 127
+ F ++ KIGEG +G VYK + L G VVA+KK L+ + E+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNK-LTGE----VVALKKIRLDTETEGVPSTAIREISL 55
Query: 128 LGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIIL 187
L ++HPN+VKLL TE+ + LV+E++ ++ L+ + + A +P +
Sbjct: 56 LKELNHPNIVKLLDVIHTEN----KLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 110
Query: 188 GAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVG 247
+GLA+ H +V++RD K N+L++ KL+DFGLAR T+ V
Sbjct: 111 QLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-- 165
Query: 248 TYGYAAPE-YIETGHLKSQSDIWSFGVVLYEILTGRRVL 285
T Y APE + + + DIWS G + E++T R +
Sbjct: 166 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 204
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 118/282 (41%), Gaps = 49/282 (17%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQG---HKQWLAEVQFLGVVSHPNL 136
+G+G FG+VY + ++A+K L L+ Q EV+ + HPN+
Sbjct: 33 LGKGKFGNVYLAR-----EKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNI 87
Query: 137 VKLLGYCSTEDERGIQRLLVYEYMP----NRSLEDRLFSRAQPTLPWKTRLEIILGAAEG 192
++L GY + L+ EY P R L+ Q T + T L A
Sbjct: 88 LRLYGYFHD----ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANA 137
Query: 193 LAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYA 252
L+Y H +VI+RD K N+LL + K++DFG + P+ T + GT Y
Sbjct: 138 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT----TLCGTLDYL 190
Query: 253 APEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVK-QFPADGKKFS 311
PE IE + D+WS GV+ YE L G+ E N K + V+ FP
Sbjct: 191 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP------- 243
Query: 312 MMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVE 353
+ AR L LK NP +RP + +V+E
Sbjct: 244 ---------DFVTEGAR---DLISRLLKHNPSQRPMLREVLE 273
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 141/285 (49%), Gaps = 36/285 (12%)
Query: 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQG--HKQWLAEVQFLG 129
+ F ++ ++G G G V+K + +P LV+A +KL + ++ Q + E+Q L
Sbjct: 25 DDFEKISELGAGNGGVVFKVSHKP-----SGLVMA-RKLIHLEIKPAIRNQIIRELQVLH 78
Query: 130 VVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGA 189
+ P +V G ++ E I E+M SL D++ +A +P + ++ +
Sbjct: 79 ECNSPYIVGFYGAFYSDGEISI----CMEHMDGGSL-DQVLKKA-GRIPEQILGKVSIAV 132
Query: 190 AEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTY 249
+GL YL E + ++++RD K SN+L++ + KL DFG++ G D ++ + VGT
Sbjct: 133 IKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--MANSFVGTR 186
Query: 250 GYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQ-KLLEWVKQFPADGK 308
Y +PE ++ H QSDIWS G+ L E+ GR + +M +LL+++ P
Sbjct: 187 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIGSGSGSMAIFELLDYIVNEPP--- 243
Query: 309 KFSMMIDPRL-RNQYSINAARRVAKLADNCLKKNPEERPTMNQVV 352
P+L +S+ V K CL KNP ER + Q++
Sbjct: 244 -------PKLPSGVFSLEFQDFVNK----CLIKNPAERADLKQLM 277
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 130/290 (44%), Gaps = 47/290 (16%)
Query: 73 GFNRMLK-IGEGGFGSVYKGTIRPLDGRGEPL-VVAVKKLNNHGLQGHKQWLAEVQFLGV 130
G R+LK IG+G F V K L G+ + ++ +LN+ LQ + EV+ + V
Sbjct: 7 GNYRLLKTIGKGNFAKV-KLARHILTGKEVAVKIIDKTQLNSSSLQ---KLFREVRIMKV 62
Query: 131 VSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRA-QPTLPWKTRLEIILGA 189
++HPN+VKL TE LV EY + D L + + + I+ A
Sbjct: 63 LNHPNIVKLFEVIETEK----TLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSA 118
Query: 190 AEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTY 249
+ Y H+ +++RD K N+LLD + K++DFG + E G+ G+
Sbjct: 119 VQ---YCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKL---DTFCGSP 169
Query: 250 GYAAPEYIETGHLKS-QSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGK 308
YAAPE + + D+WS GV+LY +++G P DG+
Sbjct: 170 PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG--------------------SLPFDGQ 209
Query: 309 KFSMMIDPRLRNQYSINAARRVAKLADNCLKK----NPEERPTMNQVVES 354
+ + LR +Y I ++ +N LKK NP +R T+ Q+++
Sbjct: 210 NLKELRERVLRGKYRI--PFYMSTDCENLLKKFLILNPSKRGTLEQIMKD 257
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 109/219 (49%), Gaps = 18/219 (8%)
Query: 70 ATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKK--LNNHGLQGHKQWLAEVQF 127
+ F ++ KIGEG +G VYK + L G VVA+KK L+ + E+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNK-LTGE----VVALKKIRLDTETEGVPSTAIREISL 58
Query: 128 LGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIIL 187
L ++HPN+VKLL TE+ + LV+E++ ++ L+ + + A +P +
Sbjct: 59 LKELNHPNIVKLLDVIHTEN----KLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 113
Query: 188 GAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVG 247
+GLA+ H +V++RD K N+L++ KL+DFGLAR T+ V
Sbjct: 114 QLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-- 168
Query: 248 TYGYAAPE-YIETGHLKSQSDIWSFGVVLYEILTGRRVL 285
T Y APE + + + DIWS G + E++T R +
Sbjct: 169 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 207
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 109/219 (49%), Gaps = 18/219 (8%)
Query: 70 ATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKK--LNNHGLQGHKQWLAEVQF 127
+ F ++ KIGEG +G VYK + L G VVA+KK L+ + E+
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNK-LTGE----VVALKKIRLDTETEGVPSTAIREISL 57
Query: 128 LGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIIL 187
L ++HPN+VKLL TE+ + LV+E++ ++ L+ + + A +P +
Sbjct: 58 LKELNHPNIVKLLDVIHTEN----KLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 112
Query: 188 GAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVG 247
+GLA+ H +V++RD K N+L++ KL+DFGLAR T+ V
Sbjct: 113 QLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-- 167
Query: 248 TYGYAAPE-YIETGHLKSQSDIWSFGVVLYEILTGRRVL 285
T Y APE + + + DIWS G + E++T R +
Sbjct: 168 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 206
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 109/219 (49%), Gaps = 18/219 (8%)
Query: 70 ATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKK--LNNHGLQGHKQWLAEVQF 127
+ F ++ KIGEG +G VYK + L G VVA+KK L+ + E+
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNK-LTGE----VVALKKIRLDTETEGVPSTAIREISL 57
Query: 128 LGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIIL 187
L ++HPN+VKLL TE+ + LV+E++ ++ L+ + + A +P +
Sbjct: 58 LKELNHPNIVKLLDVIHTEN----KLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 112
Query: 188 GAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVG 247
+GLA+ H +V++RD K N+L++ KL+DFGLAR T+ V
Sbjct: 113 QLLQGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-- 167
Query: 248 TYGYAAPE-YIETGHLKSQSDIWSFGVVLYEILTGRRVL 285
T Y APE + + + DIWS G + E++T R +
Sbjct: 168 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 206
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 109/219 (49%), Gaps = 18/219 (8%)
Query: 70 ATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKK--LNNHGLQGHKQWLAEVQF 127
+ F ++ KIGEG +G VYK + L G VVA+KK L+ + E+
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNK-LTGE----VVALKKIRLDTETEGVPSTAIREISL 57
Query: 128 LGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIIL 187
L ++HPN+VKLL TE+ + LV+E++ ++ L+ + + A +P +
Sbjct: 58 LKELNHPNIVKLLDVIHTEN----KLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 112
Query: 188 GAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVG 247
+GLA+ H +V++RD K N+L++ KL+DFGLAR T+ V
Sbjct: 113 QLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-- 167
Query: 248 TYGYAAPE-YIETGHLKSQSDIWSFGVVLYEILTGRRVL 285
T Y APE + + + DIWS G + E++T R +
Sbjct: 168 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 206
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 109/219 (49%), Gaps = 18/219 (8%)
Query: 70 ATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKK--LNNHGLQGHKQWLAEVQF 127
+ F ++ KIGEG +G VYK + L G VVA+KK L+ + E+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNK-LTGE----VVALKKIRLDTETEGVPSTAIREISL 55
Query: 128 LGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIIL 187
L ++HPN+VKLL TE+ + LV+E++ ++ L+ + + A +P +
Sbjct: 56 LKELNHPNIVKLLDVIHTEN----KLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 110
Query: 188 GAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVG 247
+GLA+ H +V++RD K N+L++ KL+DFGLAR T+ V
Sbjct: 111 QLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-- 165
Query: 248 TYGYAAPE-YIETGHLKSQSDIWSFGVVLYEILTGRRVL 285
T Y APE + + + DIWS G + E++T R +
Sbjct: 166 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 204
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 119/282 (42%), Gaps = 49/282 (17%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQG---HKQWLAEVQFLGVVSHPNL 136
+G+G FG+VY + ++A+K L L+ Q EV+ + HPN+
Sbjct: 17 LGKGKFGNVYLAR-----EKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNI 71
Query: 137 VKLLGYCSTEDERGIQRLLVYEYMP----NRSLEDRLFSRAQPTLPWKTRLEIILGAAEG 192
++L GY + L+ EY P R L+ Q T + T L A
Sbjct: 72 LRLYGYFHD----ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANA 121
Query: 193 LAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYA 252
L+Y H +VI+RD K N+LL + K++DFG + P+ T +S GT Y
Sbjct: 122 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRRTTLS----GTLDYL 174
Query: 253 APEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVK-QFPADGKKFS 311
PE IE + D+WS GV+ YE L G+ E N K + V+ FP
Sbjct: 175 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP------- 227
Query: 312 MMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVE 353
+ AR L LK NP +RP + +V+E
Sbjct: 228 ---------DFVTEGAR---DLISRLLKHNPSQRPMLREVLE 257
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 108/215 (50%), Gaps = 18/215 (8%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKK--LNNHGLQGHKQWLAEVQFLGVV 131
F ++ KIGEG +G VYK + L G VVA+KK L+ + E+ L +
Sbjct: 4 FQKVEKIGEGTYGVVYKARNK-LTGE----VVALKKIRLDTETEGVPSTAIREISLLKEL 58
Query: 132 SHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAE 191
+HPN+VKLL TE+ + LV+E++ ++ L+ + + A +P + +
Sbjct: 59 NHPNIVKLLDVIHTEN----KLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQ 113
Query: 192 GLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGY 251
GLA+ H +V++RD K N+L++ KL+DFGLAR T+ V T Y
Sbjct: 114 GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWY 168
Query: 252 AAPE-YIETGHLKSQSDIWSFGVVLYEILTGRRVL 285
APE + + + DIWS G + E++T R +
Sbjct: 169 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 203
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 109/219 (49%), Gaps = 18/219 (8%)
Query: 70 ATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKK--LNNHGLQGHKQWLAEVQF 127
+ F ++ KIGEG +G VYK + L G VVA+KK L+ + E+
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNK-LTGE----VVALKKIRLDTETEGVPSTAIREISL 56
Query: 128 LGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIIL 187
L ++HPN+VKLL TE+ + LV+E++ ++ L+ + + A +P +
Sbjct: 57 LKELNHPNIVKLLDVIHTEN----KLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 111
Query: 188 GAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVG 247
+GLA+ H +V++RD K N+L++ KL+DFGLAR T+ V
Sbjct: 112 QLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-- 166
Query: 248 TYGYAAPE-YIETGHLKSQSDIWSFGVVLYEILTGRRVL 285
T Y APE + + + DIWS G + E++T R +
Sbjct: 167 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 205
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 90/301 (29%), Positives = 126/301 (41%), Gaps = 46/301 (15%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWL-AEVQFLGVVS-HPNLV 137
+G G FG V + T L L VAVK L + K+ L +E++ + + H N+V
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 138 KLLGYCSTEDERGIQRLLVYEYM-----------PNRSLE-DRLFSRAQPTLPWKTRLEI 185
LLG C+ G L++ EY +R LE D F+ A T + L
Sbjct: 114 NLLGACT----HGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHF 169
Query: 186 ILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAV 245
A+G+A+L I+RD NVLL K+ DFGLAR+ + V
Sbjct: 170 SSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNA 226
Query: 246 VGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERN---RPTMEQKLLEWVKQ 302
+ APE I QSD+WS+G++L+EI + L N + K + VK
Sbjct: 227 RLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS----LGLNPYPGILVNSKFYKLVK- 281
Query: 303 FPADGKKFSMMIDPRL--RNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQ 360
DG + M P +N YSI A C P RPT Q+ L+ Q
Sbjct: 282 ---DGYQ---MAQPAFAPKNIYSIMQA---------CWALEPTHRPTFQQICSFLQEQAQ 326
Query: 361 E 361
E
Sbjct: 327 E 327
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 131/290 (45%), Gaps = 47/290 (16%)
Query: 73 GFNRMLK-IGEGGFGSVYKGTIRPLDGRGEPL-VVAVKKLNNHGLQGHKQWLAEVQFLGV 130
G R+LK IG+G F V K L GR + ++ +LN LQ + EV+ + +
Sbjct: 15 GNYRLLKTIGKGNFAKV-KLARHILTGREVAIKIIDKTQLNPTSLQ---KLFREVRIMKI 70
Query: 131 VSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQ-PTLPWKTRLEIILGA 189
++HPN+VKL TE L+ EY + D L + + +++ I+ A
Sbjct: 71 LNHPNIVKLFEVIETEK----TLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSA 126
Query: 190 AEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTY 249
+ Y H+ ++++RD K N+LLD + K++DFG + E G A G
Sbjct: 127 VQ---YCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKL---DAFCGAP 177
Query: 250 GYAAPEYIETGHLKS-QSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGK 308
YAAPE + + D+WS GV+LY +++G P DG+
Sbjct: 178 PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG--------------------SLPFDGQ 217
Query: 309 KFSMMIDPRLRNQYSINAARRVAKLADNCLKK----NPEERPTMNQVVES 354
+ + LR +Y I ++ +N LK+ NP +R T+ Q+++
Sbjct: 218 NLKELRERVLRGKYRI--PFYMSTDCENLLKRFLVLNPIKRGTLEQIMKD 265
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 109/219 (49%), Gaps = 18/219 (8%)
Query: 70 ATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKK--LNNHGLQGHKQWLAEVQF 127
+ F ++ KIGEG +G VYK + L G VVA+KK L+ + E+
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNK-LTGE----VVALKKIRLDTETEGVPSTAIREISL 56
Query: 128 LGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIIL 187
L ++HPN+VKLL TE+ + LV+E++ ++ L+ + + A +P +
Sbjct: 57 LKELNHPNIVKLLDVIHTEN----KLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 111
Query: 188 GAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVG 247
+GLA+ H +V++RD K N+L++ KL+DFGLAR T+ V
Sbjct: 112 QLLQGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-- 166
Query: 248 TYGYAAPE-YIETGHLKSQSDIWSFGVVLYEILTGRRVL 285
T Y APE + + + DIWS G + E++T R +
Sbjct: 167 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 205
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 118/282 (41%), Gaps = 49/282 (17%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQG---HKQWLAEVQFLGVVSHPNL 136
+G+G FG+VY + ++A+K L L+ Q EV+ + HPN+
Sbjct: 42 LGKGKFGNVYLAR-----EKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNI 96
Query: 137 VKLLGYCSTEDERGIQRLLVYEYMP----NRSLEDRLFSRAQPTLPWKTRLEIILGAAEG 192
++L GY + L+ EY P R L+ Q T + T L A
Sbjct: 97 LRLYGYFHD----ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANA 146
Query: 193 LAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYA 252
L+Y H +VI+RD K N+LL + K++DFG + P+ T + GT Y
Sbjct: 147 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT----TLCGTLDYL 199
Query: 253 APEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVK-QFPADGKKFS 311
PE IE + D+WS GV+ YE L G+ E N K + V+ FP
Sbjct: 200 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP------- 252
Query: 312 MMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVE 353
+ AR L LK NP +RP + +V+E
Sbjct: 253 ---------DFVTEGAR---DLISRLLKHNPSQRPMLREVLE 282
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 110/217 (50%), Gaps = 22/217 (10%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKK--LNNHGLQGHKQWLAEVQFLGVV 131
F ++ KIGEG +G VYK + L G VVA+KK L+ + E+ L +
Sbjct: 5 FQKVEKIGEGTYGVVYKARNK-LTGE----VVALKKIRLDTETEGVPSTAIREISLLKEL 59
Query: 132 SHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAE 191
+HPN+VKLL TE+ + LV+E++ ++ L+ + + A +P + +
Sbjct: 60 NHPNIVKLLDVIHTEN----KLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQ 114
Query: 192 GLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREG--PTGDHTHVSTAVVGTY 249
GL++ H +V++RD K N+L++ KL+DFGLAR P +TH V T
Sbjct: 115 GLSFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH----EVVTL 167
Query: 250 GYAAPE-YIETGHLKSQSDIWSFGVVLYEILTGRRVL 285
Y APE + + + DIWS G + E++T R +
Sbjct: 168 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 204
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 118/282 (41%), Gaps = 49/282 (17%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQG---HKQWLAEVQFLGVVSHPNL 136
+G+G FG+VY + ++A+K L L+ Q EV+ + HPN+
Sbjct: 19 LGKGKFGNVYLAR-----EKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNI 73
Query: 137 VKLLGYCSTEDERGIQRLLVYEYMP----NRSLEDRLFSRAQPTLPWKTRLEIILGAAEG 192
++L GY + L+ EY P R L+ Q T + T L A
Sbjct: 74 LRLYGYFHD----ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANA 123
Query: 193 LAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYA 252
L+Y H +VI+RD K N+LL + K++DFG + P+ T + GT Y
Sbjct: 124 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT----TLCGTLDYL 176
Query: 253 APEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVK-QFPADGKKFS 311
PE IE + D+WS GV+ YE L G+ E N K + V+ FP
Sbjct: 177 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP------- 229
Query: 312 MMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVE 353
+ AR L LK NP +RP + +V+E
Sbjct: 230 ---------DFVTEGAR---DLISRLLKHNPSQRPMLREVLE 259
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 109/219 (49%), Gaps = 18/219 (8%)
Query: 70 ATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKK--LNNHGLQGHKQWLAEVQF 127
+ F ++ KIGEG +G VYK + L G VVA+KK L+ + E+
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKARNK-LTGE----VVALKKIRLDTETEGVPSTAIREISL 59
Query: 128 LGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIIL 187
L ++HPN+VKLL TE+ + LV+E++ ++ L+ + + A +P +
Sbjct: 60 LKELNHPNIVKLLDVIHTEN----KLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 114
Query: 188 GAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVG 247
+GLA+ H +V++RD K N+L++ KL+DFGLAR T+ V
Sbjct: 115 QLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-- 169
Query: 248 TYGYAAPE-YIETGHLKSQSDIWSFGVVLYEILTGRRVL 285
T Y APE + + + DIWS G + E++T R +
Sbjct: 170 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 208
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 109/219 (49%), Gaps = 18/219 (8%)
Query: 70 ATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKK--LNNHGLQGHKQWLAEVQF 127
+ F ++ KIGEG +G VYK + L G VVA+KK L+ + E+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNK-LTGE----VVALKKIRLDTETEGVPSTAIREISL 58
Query: 128 LGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIIL 187
L ++HPN+VKLL TE+ + LV+E++ ++ L+ + + A +P +
Sbjct: 59 LKELNHPNIVKLLDVIHTEN----KLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 113
Query: 188 GAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVG 247
+GLA+ H +V++RD K N+L++ KL+DFGLAR T+ V
Sbjct: 114 QLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-- 168
Query: 248 TYGYAAPE-YIETGHLKSQSDIWSFGVVLYEILTGRRVL 285
T Y APE + + + DIWS G + E++T R +
Sbjct: 169 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 207
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 110/217 (50%), Gaps = 22/217 (10%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKK--LNNHGLQGHKQWLAEVQFLGVV 131
F ++ KIGEG +G VYK + L G VVA+KK L+ + E+ L +
Sbjct: 4 FQKVEKIGEGTYGVVYKARNK-LTGE----VVALKKIRLDTETEGVPSTAIREISLLKEL 58
Query: 132 SHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAE 191
+HPN+VKLL TE+ + LV+E++ ++ L+ + + A +P + +
Sbjct: 59 NHPNIVKLLDVIHTEN----KLYLVFEHV-HQDLKTFMDASALTGIPLPLIKSYLFQLLQ 113
Query: 192 GLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREG--PTGDHTHVSTAVVGTY 249
GLA+ H +V++RD K N+L++ KL+DFGLAR P +TH V T
Sbjct: 114 GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH----EVVTL 166
Query: 250 GYAAPE-YIETGHLKSQSDIWSFGVVLYEILTGRRVL 285
Y APE + + + DIWS G + E++T R +
Sbjct: 167 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 203
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 109/219 (49%), Gaps = 18/219 (8%)
Query: 70 ATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKK--LNNHGLQGHKQWLAEVQF 127
+ F ++ KIGEG +G VYK + L G VVA+KK L+ + E+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNK-LTGE----VVALKKIRLDTETEGVPSTAIREISL 58
Query: 128 LGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIIL 187
L ++HPN+VKLL TE+ + LV+E++ ++ L+ + + A +P +
Sbjct: 59 LKELNHPNIVKLLDVIHTEN----KLYLVFEFL-HQDLKTFMDASALTGIPLPLIKSYLF 113
Query: 188 GAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVG 247
+GLA+ H +V++RD K N+L++ KL+DFGLAR T+ V
Sbjct: 114 QLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-- 168
Query: 248 TYGYAAPE-YIETGHLKSQSDIWSFGVVLYEILTGRRVL 285
T Y APE + + + DIWS G + E++T R +
Sbjct: 169 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 207
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 107/215 (49%), Gaps = 18/215 (8%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSH 133
F ++ KIGEG +G VYK + GE + + +L+ + E+ L ++H
Sbjct: 5 FQKVEKIGEGTYGVVYKARNK---LTGEVVALXKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 134 PNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGL 193
PN+VKLL TE+ + LV+E++ ++ L+ + + A +P + +GL
Sbjct: 62 PNIVKLLDVIHTEN----KLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 116
Query: 194 AYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREG--PTGDHTHVSTAVVGTYGY 251
A+ H +V++RD K N+L++ KL+DFGLAR P +TH V T Y
Sbjct: 117 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH----EVVTLWY 169
Query: 252 AAPE-YIETGHLKSQSDIWSFGVVLYEILTGRRVL 285
APE + + + DIWS G + E++T R +
Sbjct: 170 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 204
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 107/215 (49%), Gaps = 18/215 (8%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSH 133
F ++ KIGEG +G VYK + GE + + +L+ + E+ L ++H
Sbjct: 4 FQKVEKIGEGTYGVVYKARNK---LTGEVVALXKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 134 PNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGL 193
PN+VKLL TE+ + LV+E++ ++ L+ + + A +P + +GL
Sbjct: 61 PNIVKLLDVIHTEN----KLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 115
Query: 194 AYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREG--PTGDHTHVSTAVVGTYGY 251
A+ H +V++RD K N+L++ KL+DFGLAR P +TH V T Y
Sbjct: 116 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH----EVVTLWY 168
Query: 252 AAPE-YIETGHLKSQSDIWSFGVVLYEILTGRRVL 285
APE + + + DIWS G + E++T R +
Sbjct: 169 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 203
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 108/215 (50%), Gaps = 18/215 (8%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKK--LNNHGLQGHKQWLAEVQFLGVV 131
F ++ KIGEG +G VYK + L G VVA+KK L+ + E+ L +
Sbjct: 6 FQKVEKIGEGTYGVVYKARNK-LTGE----VVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 132 SHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAE 191
+HPN+VKLL TE+ + LV+E++ ++ L+ + + A +P + +
Sbjct: 61 NHPNIVKLLDVIHTEN----KLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQ 115
Query: 192 GLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGY 251
GLA+ H +V++RD K N+L++ KL+DFGLAR T+ V T Y
Sbjct: 116 GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWY 170
Query: 252 AAPE-YIETGHLKSQSDIWSFGVVLYEILTGRRVL 285
APE + + + DIWS G + E++T R +
Sbjct: 171 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 205
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 118/282 (41%), Gaps = 49/282 (17%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQG---HKQWLAEVQFLGVVSHPNL 136
+G+G FG+VY + ++A+K L L+ Q EV+ + HPN+
Sbjct: 21 LGKGKFGNVYLAR-----EKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNI 75
Query: 137 VKLLGYCSTEDERGIQRLLVYEYMP----NRSLEDRLFSRAQPTLPWKTRLEIILGAAEG 192
++L GY + L+ EY P R L+ Q T + T L A
Sbjct: 76 LRLYGYFHD----ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANA 125
Query: 193 LAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYA 252
L+Y H +VI+RD K N+LL + K++DFG + P+ T + GT Y
Sbjct: 126 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT----TLCGTLDYL 178
Query: 253 APEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVK-QFPADGKKFS 311
PE IE + D+WS GV+ YE L G+ E N K + V+ FP
Sbjct: 179 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP------- 231
Query: 312 MMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVE 353
+ AR L LK NP +RP + +V+E
Sbjct: 232 ---------DFVTEGAR---DLISRLLKHNPSQRPMLREVLE 261
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 118/282 (41%), Gaps = 49/282 (17%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQG---HKQWLAEVQFLGVVSHPNL 136
+G+G FG+VY + ++A+K L L+ Q EV+ + HPN+
Sbjct: 21 LGKGKFGNVYLAR-----EKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNI 75
Query: 137 VKLLGYCSTEDERGIQRLLVYEYMP----NRSLEDRLFSRAQPTLPWKTRLEIILGAAEG 192
++L GY + L+ EY P R L+ Q T + T L A
Sbjct: 76 LRLYGYFHD----ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANA 125
Query: 193 LAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYA 252
L+Y H +VI+RD K N+LL + K++DFG + P+ T + GT Y
Sbjct: 126 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT----TLCGTLDYL 178
Query: 253 APEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVK-QFPADGKKFS 311
PE IE + D+WS GV+ YE L G+ E N K + V+ FP
Sbjct: 179 PPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP------- 231
Query: 312 MMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVE 353
+ AR L LK NP +RP + +V+E
Sbjct: 232 ---------DFVTEGAR---DLISRLLKHNPSQRPXLREVLE 261
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 118/282 (41%), Gaps = 49/282 (17%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQG---HKQWLAEVQFLGVVSHPNL 136
+G+G FG+VY + ++A+K L L+ Q EV+ + HPN+
Sbjct: 19 LGKGKFGNVYLAR-----EKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNI 73
Query: 137 VKLLGYCSTEDERGIQRLLVYEYMP----NRSLEDRLFSRAQPTLPWKTRLEIILGAAEG 192
++L GY + L+ EY P R L+ Q T + T L A
Sbjct: 74 LRLYGYFHD----ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANA 123
Query: 193 LAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYA 252
L+Y H +VI+RD K N+LL + K++DFG + P+ T + GT Y
Sbjct: 124 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT----TLCGTLDYL 176
Query: 253 APEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVK-QFPADGKKFS 311
PE IE + D+WS GV+ YE L G+ E N K + V+ FP
Sbjct: 177 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP------- 229
Query: 312 MMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVE 353
+ AR L LK NP +RP + +V+E
Sbjct: 230 ---------DFVTEGAR---DLISRLLKHNPSQRPMLREVLE 259
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 141/292 (48%), Gaps = 40/292 (13%)
Query: 64 MQELREATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQG--HKQW 121
+ EL++ + F ++ ++G G G V+K + +P +V +KL + ++ Q
Sbjct: 3 LGELKD--DDFEKISELGAGNGGVVFKVSHKPSG------LVMARKLIHLEIKPAIRNQI 54
Query: 122 LAEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKT 181
+ E+Q L + P +V G ++ E I E+M SL D++ +A +P +
Sbjct: 55 IRELQVLHECNSPYIVGFYGAFYSDGEISI----CMEHMDGGSL-DQVLKKAG-RIPEQI 108
Query: 182 RLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHV 241
++ + +GL YL E + ++++RD K SN+L++ + KL DFG++ G D +
Sbjct: 109 LGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDE--M 162
Query: 242 STAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQ-KLLEWV 300
+ VGT Y +PE ++ H QSDIWS G+ L E+ GR RP M +LL+++
Sbjct: 163 ANEFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR----YPRPPMAIFELLDYI 218
Query: 301 KQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVV 352
P P+L S + + CL KNP ER + Q++
Sbjct: 219 VNEPP----------PKLP---SAVFSLEFQDFVNKCLIKNPAERADLKQLM 257
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 108/219 (49%), Gaps = 18/219 (8%)
Query: 70 ATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKK--LNNHGLQGHKQWLAEVQF 127
+ F ++ KIGEG +G VYK + L G VVA+KK L+ + E+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNK-LTGE----VVALKKIRLDTETEGVPSTAIREISL 58
Query: 128 LGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIIL 187
L ++HPN+VKLL TE+ + LV+E++ + L+ + + A +P +
Sbjct: 59 LKELNHPNIVKLLDVIHTEN----KLYLVFEFL-SMDLKKFMDASALTGIPLPLIKSYLF 113
Query: 188 GAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVG 247
+GLA+ H +V++RD K N+L++ KL+DFGLAR T+ V
Sbjct: 114 QLLQGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-- 168
Query: 248 TYGYAAPE-YIETGHLKSQSDIWSFGVVLYEILTGRRVL 285
T Y APE + + + DIWS G + E++T R +
Sbjct: 169 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 207
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 108/219 (49%), Gaps = 18/219 (8%)
Query: 70 ATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKK--LNNHGLQGHKQWLAEVQF 127
+ F ++ KIGEG +G VYK + L G VVA+KK L+ + E+
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNK-LTGE----VVALKKIRLDTETEGVPSTAIREISL 56
Query: 128 LGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIIL 187
L ++HPN+VKLL TE+ + LV+E++ + L+ + + A +P +
Sbjct: 57 LKELNHPNIVKLLDVIHTEN----KLYLVFEFL-SMDLKKFMDASALTGIPLPLIKSYLF 111
Query: 188 GAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVG 247
+GLA+ H +V++RD K N+L++ KL+DFGLAR T+ V
Sbjct: 112 QLLQGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-- 166
Query: 248 TYGYAAPE-YIETGHLKSQSDIWSFGVVLYEILTGRRVL 285
T Y APE + + + DIWS G + E++T R +
Sbjct: 167 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 205
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 128/293 (43%), Gaps = 32/293 (10%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNN-HGLQGHKQWLAEVQFLGVVSHPNLVK 138
+G G FG VY+G + + PL VAVK L Q +L E + +H N+V+
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLEDRLF-SRAQPTLPWKTRLEIILGAAEGLA--- 194
+G + + R ++ E M L+ L +R +P+ P + +L A +A
Sbjct: 99 CIGV----SLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 154
Query: 195 -YLHEGLEIQVIYRDFKTSNVLLDG---NFKPKLSDFGLAREGPTGDHTHVSTAVVGTYG 250
YL E I+RD N LL K+ DFG+A++ + +
Sbjct: 155 QYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVK 211
Query: 251 YAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKF 310
+ PE G S++D WSFGV+L+EI + + ++ Q++LE+V + G+
Sbjct: 212 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN--QEVLEFVT---SGGR-- 264
Query: 311 SMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQESE 363
+DP N V ++ C + PE+RP ++E ++ Q+ +
Sbjct: 265 ---MDP------PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPD 308
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 118/282 (41%), Gaps = 49/282 (17%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQG---HKQWLAEVQFLGVVSHPNL 136
+G+G FG+VY + ++A+K L L+ Q EV+ + HPN+
Sbjct: 15 LGKGKFGNVYLAR-----EKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNI 69
Query: 137 VKLLGYCSTEDERGIQRLLVYEYMP----NRSLEDRLFSRAQPTLPWKTRLEIILGAAEG 192
++L GY + L+ EY P R L+ Q T + T L A
Sbjct: 70 LRLYGYFHD----ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANA 119
Query: 193 LAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYA 252
L+Y H +VI+RD K N+LL + K++DFG + P+ T + GT Y
Sbjct: 120 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT----TLCGTLDYL 172
Query: 253 APEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVK-QFPADGKKFS 311
PE IE + D+WS GV+ YE L G+ E N K + V+ FP
Sbjct: 173 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP------- 225
Query: 312 MMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVE 353
+ AR L LK NP +RP + +V+E
Sbjct: 226 ---------DFVTEGAR---DLISRLLKHNPSQRPMLREVLE 255
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 118/282 (41%), Gaps = 49/282 (17%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQG---HKQWLAEVQFLGVVSHPNL 136
+G+G FG+VY + ++A+K L L+ Q EV+ + HPN+
Sbjct: 16 LGKGKFGNVYLAR-----EKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNI 70
Query: 137 VKLLGYCSTEDERGIQRLLVYEYMP----NRSLEDRLFSRAQPTLPWKTRLEIILGAAEG 192
++L GY + L+ EY P R L+ Q T + T L A
Sbjct: 71 LRLYGYFHD----ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANA 120
Query: 193 LAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYA 252
L+Y H +VI+RD K N+LL + K++DFG + P+ T + GT Y
Sbjct: 121 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT----TLCGTLDYL 173
Query: 253 APEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVK-QFPADGKKFS 311
PE IE + D+WS GV+ YE L G+ E N K + V+ FP
Sbjct: 174 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP------- 226
Query: 312 MMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVE 353
+ AR L LK NP +RP + +V+E
Sbjct: 227 ---------DFVTEGAR---DLISRLLKHNPSQRPMLREVLE 256
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 126/287 (43%), Gaps = 47/287 (16%)
Query: 73 GFNRMLK-IGEGGFGSVYKGTIRPLDGRGEPL-VVAVKKLNNHGLQGHKQWLAEVQFLGV 130
G R+LK IG+G F V K L G+ + ++ +LN+ LQ + EV+ V
Sbjct: 14 GNYRLLKTIGKGNFAKV-KLARHILTGKEVAVKIIDKTQLNSSSLQ---KLFREVRIXKV 69
Query: 131 VSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQ-PTLPWKTRLEIILGA 189
++HPN+VKL TE LV EY + D L + + + + I+ A
Sbjct: 70 LNHPNIVKLFEVIETEK----TLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSA 125
Query: 190 AEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTY 249
+ Y H+ +++RD K N+LLD + K++DFG + E G+ A G
Sbjct: 126 VQ---YCHQKF---IVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKL---DAFCGAP 176
Query: 250 GYAAPEYIETGHLKS-QSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGK 308
YAAPE + + D+WS GV+LY +++G P DG+
Sbjct: 177 PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG--------------------SLPFDGQ 216
Query: 309 KFSMMIDPRLRNQYSINAARRVAKLADNCLKK----NPEERPTMNQV 351
+ + LR +Y I +N LKK NP +R T+ Q+
Sbjct: 217 NLKELRERVLRGKYRIPFYXSTD--CENLLKKFLILNPSKRGTLEQI 261
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 118/282 (41%), Gaps = 49/282 (17%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQG---HKQWLAEVQFLGVVSHPNL 136
+G+G FG+VY + ++A+K L L+ Q EV+ + HPN+
Sbjct: 16 LGKGKFGNVYLAR-----EKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNI 70
Query: 137 VKLLGYCSTEDERGIQRLLVYEYMP----NRSLEDRLFSRAQPTLPWKTRLEIILGAAEG 192
++L GY + L+ EY P R L+ Q T + T L A
Sbjct: 71 LRLYGYFHD----STRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANA 120
Query: 193 LAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYA 252
L+Y H +VI+RD K N+LL + K++DFG + P+ A+ GT Y
Sbjct: 121 LSYCHSK---KVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRA----ALCGTLDYL 173
Query: 253 APEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVK-QFPADGKKFS 311
PE IE + D+WS GV+ YE L G+ E N K + V+ FP
Sbjct: 174 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRISRVEFTFP------- 226
Query: 312 MMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVE 353
+ AR L LK NP +RP + +V+E
Sbjct: 227 ---------DFVTEGAR---DLISRLLKHNPSQRPMLREVLE 256
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 118/282 (41%), Gaps = 49/282 (17%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQG---HKQWLAEVQFLGVVSHPNL 136
+G+G FG+VY + ++A+K L L+ Q EV+ + HPN+
Sbjct: 17 LGKGKFGNVYLAR-----EKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNI 71
Query: 137 VKLLGYCSTEDERGIQRLLVYEYMP----NRSLEDRLFSRAQPTLPWKTRLEIILGAAEG 192
++L GY + L+ EY P R L+ Q T + T L A
Sbjct: 72 LRLYGYFHD----ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANA 121
Query: 193 LAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYA 252
L+Y H +VI+RD K N+LL + K++DFG + P+ T + GT Y
Sbjct: 122 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDL----CGTLDYL 174
Query: 253 APEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVK-QFPADGKKFS 311
PE IE + D+WS GV+ YE L G+ E N K + V+ FP
Sbjct: 175 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP------- 227
Query: 312 MMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVE 353
+ AR L LK NP +RP + +V+E
Sbjct: 228 ---------DFVTEGAR---DLISRLLKHNPSQRPMLREVLE 257
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 118/282 (41%), Gaps = 49/282 (17%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQG---HKQWLAEVQFLGVVSHPNL 136
+G+G FG+VY + ++A+K L L+ Q EV+ + HPN+
Sbjct: 21 LGKGKFGNVYLAR-----EKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNI 75
Query: 137 VKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRA----QPTLPWKTRLEIILGAAEG 192
++L GY + L+ EY P + L + Q T + T L A
Sbjct: 76 LRLYGYFHD----ATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITEL------ANA 125
Query: 193 LAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYA 252
L+Y H +VI+RD K N+LL + K++DFG + P+ T + GT Y
Sbjct: 126 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT----TLCGTLDYL 178
Query: 253 APEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVK-QFPADGKKFS 311
PE IE + D+WS GV+ YE L G+ E N K + V+ FP
Sbjct: 179 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP------- 231
Query: 312 MMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVE 353
+ AR L LK NP +RP + +V+E
Sbjct: 232 ---------DFVTEGAR---DLISRLLKHNPSQRPMLREVLE 261
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 118/282 (41%), Gaps = 49/282 (17%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQG---HKQWLAEVQFLGVVSHPNL 136
+G+G FG+VY + ++A+K L L+ Q EV+ + HPN+
Sbjct: 16 LGKGKFGNVYLAR-----EKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNI 70
Query: 137 VKLLGYCSTEDERGIQRLLVYEYMP----NRSLEDRLFSRAQPTLPWKTRLEIILGAAEG 192
++L GY + L+ EY P R L+ Q T + T L A
Sbjct: 71 LRLYGYFHD----ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANA 120
Query: 193 LAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYA 252
L+Y H +VI+RD K N+LL + K++DFG + P+ A+ GT Y
Sbjct: 121 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRA----ALCGTLDYL 173
Query: 253 APEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVK-QFPADGKKFS 311
PE IE + D+WS GV+ YE L G+ E N K + V+ FP
Sbjct: 174 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP------- 226
Query: 312 MMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVE 353
+ AR L LK NP +RP + +V+E
Sbjct: 227 ---------DFVTEGAR---DLISRLLKHNPSQRPMLREVLE 256
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 118/282 (41%), Gaps = 49/282 (17%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQG---HKQWLAEVQFLGVVSHPNL 136
+G+G FG+VY + ++A+K L L+ Q EV+ + HPN+
Sbjct: 16 LGKGKFGNVYLAR-----EKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNI 70
Query: 137 VKLLGYCSTEDERGIQRLLVYEYMP----NRSLEDRLFSRAQPTLPWKTRLEIILGAAEG 192
++L GY + L+ EY P R L+ Q T + T L A
Sbjct: 71 LRLYGYFHD----ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANA 120
Query: 193 LAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYA 252
L+Y H +VI+RD K N+LL + K++DFG + P+ T + GT Y
Sbjct: 121 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDL----CGTLDYL 173
Query: 253 APEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVK-QFPADGKKFS 311
PE IE + D+WS GV+ YE L G+ E N K + V+ FP
Sbjct: 174 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP------- 226
Query: 312 MMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVE 353
+ AR L LK NP +RP + +V+E
Sbjct: 227 ---------DFVTEGAR---DLISRLLKHNPSQRPMLREVLE 256
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 109/219 (49%), Gaps = 18/219 (8%)
Query: 70 ATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKK--LNNHGLQGHKQWLAEVQF 127
+ F ++ KIGEG +G VYK + L G VVA+KK L+ + E+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNK-LTGE----VVALKKIRLDTETEGVPSTAIREISL 58
Query: 128 LGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIIL 187
L ++HPN+VKLL TE+ + LV+E++ ++ L+ + + A +P +
Sbjct: 59 LKELNHPNIVKLLDVIHTEN----KLYLVFEHV-DQDLKKFMDASALTGIPLPLIKSYLF 113
Query: 188 GAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVG 247
+GLA+ H +V++RD K N+L++ KL+DFGLAR T+ V
Sbjct: 114 QLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-- 168
Query: 248 TYGYAAPE-YIETGHLKSQSDIWSFGVVLYEILTGRRVL 285
T Y APE + + + DIWS G + E++T R +
Sbjct: 169 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 207
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 118/282 (41%), Gaps = 49/282 (17%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQG---HKQWLAEVQFLGVVSHPNL 136
+G+G FG+VY + ++A+K L L+ Q EV+ + HPN+
Sbjct: 21 LGKGKFGNVYLAR-----EKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNI 75
Query: 137 VKLLGYCSTEDERGIQRLLVYEYMP----NRSLEDRLFSRAQPTLPWKTRLEIILGAAEG 192
++L GY + L+ EY P R L+ Q T + T L A
Sbjct: 76 LRLYGYFHD----ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANA 125
Query: 193 LAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYA 252
L+Y H +VI+RD K N+LL + K++DFG + P+ T + GT Y
Sbjct: 126 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDL----CGTLDYL 178
Query: 253 APEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVK-QFPADGKKFS 311
PE IE + D+WS GV+ YE L G+ E N K + V+ FP
Sbjct: 179 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP------- 231
Query: 312 MMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVE 353
+ AR L LK NP +RP + +V+E
Sbjct: 232 ---------DFVTEGAR---DLISRLLKHNPSQRPMLREVLE 261
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 118/282 (41%), Gaps = 49/282 (17%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQG---HKQWLAEVQFLGVVSHPNL 136
+G+G FG+VY + ++A+K L L+ Q EV+ + HPN+
Sbjct: 19 LGKGKFGNVYLAR-----EKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNI 73
Query: 137 VKLLGYCSTEDERGIQRLLVYEYMP----NRSLEDRLFSRAQPTLPWKTRLEIILGAAEG 192
++L GY + L+ EY P R L+ Q T + T L A
Sbjct: 74 LRLYGYFHD----ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANA 123
Query: 193 LAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYA 252
L+Y H +VI+RD K N+LL + K++DFG + P+ A+ GT Y
Sbjct: 124 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRA----ALCGTLDYL 176
Query: 253 APEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVK-QFPADGKKFS 311
PE IE + D+WS GV+ YE L G+ E N K + V+ FP
Sbjct: 177 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP------- 229
Query: 312 MMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVE 353
+ AR L LK NP +RP + +V+E
Sbjct: 230 ---------DFVTEGAR---DLISRLLKHNPSQRPMLREVLE 259
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 118/282 (41%), Gaps = 49/282 (17%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQG---HKQWLAEVQFLGVVSHPNL 136
+G+G FG+VY + ++A+K L L+ Q EV+ + HPN+
Sbjct: 16 LGKGKFGNVYLAR-----EKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNI 70
Query: 137 VKLLGYCSTEDERGIQRLLVYEYMP----NRSLEDRLFSRAQPTLPWKTRLEIILGAAEG 192
++L GY + L+ EY P R L+ Q T + T L A
Sbjct: 71 LRLYGYFHD----ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANA 120
Query: 193 LAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYA 252
L+Y H +VI+RD K N+LL + K++DFG + P+ T + GT Y
Sbjct: 121 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDL----CGTLDYL 173
Query: 253 APEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVK-QFPADGKKFS 311
PE IE + D+WS GV+ YE L G+ E N K + V+ FP
Sbjct: 174 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP------- 226
Query: 312 MMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVE 353
+ AR L LK NP +RP + +V+E
Sbjct: 227 ---------DFVTEGAR---DLISRLLKHNPSQRPMLREVLE 256
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 118/282 (41%), Gaps = 49/282 (17%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQG---HKQWLAEVQFLGVVSHPNL 136
+G+G FG+VY + ++A+K L L+ Q EV+ + HPN+
Sbjct: 16 LGKGKFGNVYLAR-----EKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNI 70
Query: 137 VKLLGYCSTEDERGIQRLLVYEYMP----NRSLEDRLFSRAQPTLPWKTRLEIILGAAEG 192
++L GY + L+ EY P R L+ Q T + T L A
Sbjct: 71 LRLYGYFHD----ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANA 120
Query: 193 LAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYA 252
L+Y H +VI+RD K N+LL + K++DFG + P+ T + GT Y
Sbjct: 121 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTEL----CGTLDYL 173
Query: 253 APEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVK-QFPADGKKFS 311
PE IE + D+WS GV+ YE L G+ E N K + V+ FP
Sbjct: 174 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP------- 226
Query: 312 MMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVE 353
+ AR L LK NP +RP + +V+E
Sbjct: 227 ---------DFVTEGAR---DLISRLLKHNPSQRPMLREVLE 256
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 107/216 (49%), Gaps = 18/216 (8%)
Query: 70 ATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLN-NHGLQGHK----QWLAE 124
AT+ + + +IG G +G+VYK P G VA+K + +G +G + +A
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKAR-DPHSGH----FVALKSVRVPNGEEGLPISTVREVAL 56
Query: 125 VQFLGVVSHPNLVKLLGYCSTE-DERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRL 183
++ L HPN+V+L+ C+T +R I+ LV+E++ ++ L L P LP +T
Sbjct: 57 LRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIK 115
Query: 184 EIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVST 243
+++ GL +LH +++RD K N+L+ KL+DFGLAR +
Sbjct: 116 DLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLAR---IYSYQMALA 169
Query: 244 AVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEIL 279
VV T Y APE + + D+WS G + E+
Sbjct: 170 PVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 118/282 (41%), Gaps = 49/282 (17%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQG---HKQWLAEVQFLGVVSHPNL 136
+G+G FG+VY + ++A+K L L+ Q EV+ + HPN+
Sbjct: 20 LGKGKFGNVYLAR-----EKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNI 74
Query: 137 VKLLGYCSTEDERGIQRLLVYEYMP----NRSLEDRLFSRAQPTLPWKTRLEIILGAAEG 192
++L GY + L+ EY P R L+ Q T + T L A
Sbjct: 75 LRLYGYFHD----ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANA 124
Query: 193 LAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYA 252
L+Y H +VI+RD K N+LL + K++DFG + P+ T + GT Y
Sbjct: 125 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT----TLCGTLDYL 177
Query: 253 APEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVK-QFPADGKKFS 311
PE IE + D+WS GV+ YE L G+ E N K + V+ FP
Sbjct: 178 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP------- 230
Query: 312 MMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVE 353
+ AR L LK NP +RP + +V+E
Sbjct: 231 ---------DFVTEGAR---DLISRLLKHNPSQRPMLREVLE 260
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 104/219 (47%), Gaps = 21/219 (9%)
Query: 70 ATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWL------- 122
AT+ + + +IG G +G+VYK P G VA+K + G L
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKAR-DPHSGH----FVALKSVRVPNGGGGGGGLPISTVRE 61
Query: 123 -AEVQFLGVVSHPNLVKLLGYCSTE-DERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWK 180
A ++ L HPN+V+L+ C+T +R I+ LV+E++ ++ L L P LP +
Sbjct: 62 VALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAE 120
Query: 181 TRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTH 240
T +++ GL +LH +++RD K N+L+ KL+DFGLAR +
Sbjct: 121 TIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLAR---IYSYQM 174
Query: 241 VSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEIL 279
T VV T Y APE + + D+WS G + E+
Sbjct: 175 ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 213
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 97/203 (47%), Gaps = 8/203 (3%)
Query: 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVK 138
++G+G FGSV PL G +VAVK+L + G + + E+Q L + +VK
Sbjct: 17 QLGKGNFGSVELCRYDPL-GDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK 75
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHE 198
G + ++ LV EY+P+ L D L R + L L +G+ YL
Sbjct: 76 YRGVSYGPGRQSLR--LVMEYLPSGCLRDFL-QRHRARLDASRLLLYSSQICKGMEYLGS 132
Query: 199 GLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTG-DHTHVSTAVVGTYGYAAPEYI 257
+ ++RD N+L++ K++DFGLA+ P D+ V + APE +
Sbjct: 133 R---RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESL 189
Query: 258 ETGHLKSQSDIWSFGVVLYEILT 280
QSD+WSFGVVLYE+ T
Sbjct: 190 SDNIFSRQSDVWSFGVVLYELFT 212
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 118/282 (41%), Gaps = 49/282 (17%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQG---HKQWLAEVQFLGVVSHPNL 136
+G+G FG+VY + ++A+K L L+ Q EV+ + HPN+
Sbjct: 13 LGKGKFGNVYLAR-----EKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNI 67
Query: 137 VKLLGYCSTEDERGIQRLLVYEYMP----NRSLEDRLFSRAQPTLPWKTRLEIILGAAEG 192
++L GY + L+ EY P R L+ Q T + T L A
Sbjct: 68 LRLYGYFHD----ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANA 117
Query: 193 LAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYA 252
L+Y H +VI+RD K N+LL + K++DFG + P+ T + GT Y
Sbjct: 118 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----RTTLCGTLDYL 170
Query: 253 APEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVK-QFPADGKKFS 311
PE IE + D+WS GV+ YE L G+ E N K + V+ FP
Sbjct: 171 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP------- 223
Query: 312 MMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVE 353
+ AR L LK NP +RP + +V+E
Sbjct: 224 ---------DFVTEGAR---DLISRLLKHNPSQRPMLREVLE 253
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 131/290 (45%), Gaps = 47/290 (16%)
Query: 73 GFNRMLK-IGEGGFGSVYKGTIRPLDGRGEPL-VVAVKKLNNHGLQGHKQWLAEVQFLGV 130
G R+LK IG+G F V K L GR + ++ +LN LQ + EV+ + +
Sbjct: 12 GNYRLLKTIGKGNFAKV-KLARHILTGREVAIKIIDKTQLNPTSLQ---KLFREVRIMKI 67
Query: 131 VSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQ-PTLPWKTRLEIILGA 189
++HPN+VKL TE L+ EY + D L + + +++ I+ A
Sbjct: 68 LNHPNIVKLFEVIETEK----TLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSA 123
Query: 190 AEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTY 249
+ Y H+ ++++RD K N+LLD + K++DFG + E G G+
Sbjct: 124 VQ---YCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKL---DTFCGSP 174
Query: 250 GYAAPEYIETGHLKS-QSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGK 308
YAAPE + + D+WS GV+LY +++G P DG+
Sbjct: 175 PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG--------------------SLPFDGQ 214
Query: 309 KFSMMIDPRLRNQYSINAARRVAKLADNCLKK----NPEERPTMNQVVES 354
+ + LR +Y I ++ +N LK+ NP +R T+ Q+++
Sbjct: 215 NLKELRERVLRGKYRI--PFYMSTDCENLLKRFLVLNPIKRGTLEQIMKD 262
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 97/203 (47%), Gaps = 8/203 (3%)
Query: 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVK 138
++G+G FGSV PL G +VAVK+L + G + + E+Q L + +VK
Sbjct: 30 QLGKGNFGSVELCRYDPL-GDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK 88
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHE 198
G + ++ LV EY+P+ L D L R + L L +G+ YL
Sbjct: 89 YRGVSYGPGRQSLR--LVMEYLPSGCLRDFL-QRHRARLDASRLLLYSSQICKGMEYLGS 145
Query: 199 GLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTG-DHTHVSTAVVGTYGYAAPEYI 257
+ ++RD N+L++ K++DFGLA+ P D+ V + APE +
Sbjct: 146 R---RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESL 202
Query: 258 ETGHLKSQSDIWSFGVVLYEILT 280
QSD+WSFGVVLYE+ T
Sbjct: 203 SDNIFSRQSDVWSFGVVLYELFT 225
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 118/282 (41%), Gaps = 49/282 (17%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQG---HKQWLAEVQFLGVVSHPNL 136
+G+G FG+VY + ++A+K L L+ Q EV+ + HPN+
Sbjct: 16 LGKGKFGNVYLAR-----EKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNI 70
Query: 137 VKLLGYCSTEDERGIQRLLVYEYMP----NRSLEDRLFSRAQPTLPWKTRLEIILGAAEG 192
++L GY + L+ EY P R L+ Q T + T L A
Sbjct: 71 LRLYGYFHD----ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANA 120
Query: 193 LAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYA 252
L+Y H +VI+RD K N+LL + K++DFG + P+ T + GT Y
Sbjct: 121 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT----XLCGTLDYL 173
Query: 253 APEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVK-QFPADGKKFS 311
PE IE + D+WS GV+ YE L G+ E N K + V+ FP
Sbjct: 174 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP------- 226
Query: 312 MMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVE 353
+ AR L LK NP +RP + +V+E
Sbjct: 227 ---------DFVTEGAR---DLISRLLKHNPSQRPMLREVLE 256
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 97/203 (47%), Gaps = 8/203 (3%)
Query: 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVK 138
++G+G FGSV PL G +VAVK+L + G + + E+Q L + +VK
Sbjct: 18 QLGKGNFGSVELCRYDPL-GDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK 76
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHE 198
G + ++ LV EY+P+ L D L R + L L +G+ YL
Sbjct: 77 YRGVSYGPGRQSLR--LVMEYLPSGCLRDFL-QRHRARLDASRLLLYSSQICKGMEYLGS 133
Query: 199 GLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTG-DHTHVSTAVVGTYGYAAPEYI 257
+ ++RD N+L++ K++DFGLA+ P D+ V + APE +
Sbjct: 134 R---RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESL 190
Query: 258 ETGHLKSQSDIWSFGVVLYEILT 280
QSD+WSFGVVLYE+ T
Sbjct: 191 SDNIFSRQSDVWSFGVVLYELFT 213
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 107/216 (49%), Gaps = 18/216 (8%)
Query: 70 ATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLN-NHGLQGHK----QWLAE 124
AT+ + + +IG G +G+VYK P G VA+K + +G +G + +A
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKAR-DPHSGH----FVALKSVRVPNGEEGLPISTVREVAL 56
Query: 125 VQFLGVVSHPNLVKLLGYCSTE-DERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRL 183
++ L HPN+V+L+ C+T +R I+ LV+E++ ++ L L P LP +T
Sbjct: 57 LRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIK 115
Query: 184 EIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVST 243
+++ GL +LH +++RD K N+L+ KL+DFGLAR +
Sbjct: 116 DLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLAR---IYSYQMALD 169
Query: 244 AVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEIL 279
VV T Y APE + + D+WS G + E+
Sbjct: 170 PVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 102/210 (48%), Gaps = 11/210 (5%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPL-DGRGEPLVVAVKKLNNHGLQGHKQWLA-EVQFLGVV 131
R+ +GEG FG V P D GE VAVK L H L E++ L +
Sbjct: 23 LKRIRDLGEGHFGKVELCRYDPEGDNTGEQ--VAVKSLKPESGGNHIADLKKEIEILRNL 80
Query: 132 SHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAE 191
H N+VK G C+ + GI+ L+ E++P+ SL++ L + + + K +L+ + +
Sbjct: 81 YHENIVKYKGICTEDGGNGIK--LIMEFLPSGSLKEYL-PKNKNKINLKQQLKYAVQICK 137
Query: 192 GLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTG-DHTHVSTAVVGTYG 250
G+ YL Q ++RD NVL++ + K+ DFGL + T + V
Sbjct: 138 GMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVF 194
Query: 251 YAAPEYIETGHLKSQSDIWSFGVVLYEILT 280
+ APE + SD+WSFGV L+E+LT
Sbjct: 195 WYAPECLMQSKFYIASDVWSFGVTLHELLT 224
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 108/227 (47%), Gaps = 28/227 (12%)
Query: 60 RVFDMQELREATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNN-HGLQGH 118
R+F ELR ++ +G G FG+V+KG P +G + V +K + + G Q
Sbjct: 26 RIFKETELR-------KLKVLGSGVFGTVHKGVWIP-EGESIKIPVCIKVIEDKSGRQSF 77
Query: 119 KQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSR-----A 173
+ + +G + H ++V+LLG C G LV +Y+P SL D +
Sbjct: 78 QAVTDHMLAIGSLDHAHIVRLLGLCP-----GSSLQLVTQYLPLGSLLDHVRQHRGALGP 132
Query: 174 QPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREG 233
Q L W ++ A+G+ YL E +++R+ NVLL + +++DFG+A
Sbjct: 133 QLLLNWGVQI------AKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVADLL 183
Query: 234 PTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILT 280
P D + + + A E I G QSD+WS+GV ++E++T
Sbjct: 184 PPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMT 230
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 109/231 (47%), Gaps = 24/231 (10%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHK---QWLAEVQFLGVVSHPNL 136
+G G FG V G L G VAVK LN ++ + E+Q L + HP++
Sbjct: 24 LGVGTFGKVKVGK-HELTGHK----VAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHI 78
Query: 137 VKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYL 196
+KL ST + +V EY+ L D + + L K + G+ Y
Sbjct: 79 IKLYQVISTPSDI----FMVMEYVSGGELFDYICKNGR--LDEKESRRLFQQILSGVDYC 132
Query: 197 HEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEY 256
H + V++RD K NVLLD + K++DFGL+ G+ S G+ YAAPE
Sbjct: 133 HRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSC---GSPNYAAPEV 186
Query: 257 IETGHLKS--QSDIWSFGVVLYEILTGRRVLERNR-PTMEQKLLEWVKQFP 304
I +G L + + DIWS GV+LY +L G + + PT+ +K+ + + P
Sbjct: 187 I-SGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYTP 236
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 89/297 (29%), Positives = 126/297 (42%), Gaps = 42/297 (14%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWL-AEVQFLGVVS-HPNLV 137
+G G FG V + T L L VAVK L + K+ L +E++ + + H N+V
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 138 KLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTL------PWKTR--LEIILGA 189
LLG C+ G L++ EY L + L +A+ L P + R L
Sbjct: 114 NLLGACT----HGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQV 169
Query: 190 AEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTY 249
A+G+A+L I+RD NVLL K+ DFGLAR+ + V
Sbjct: 170 AQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPV 226
Query: 250 GYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERN---RPTMEQKLLEWVKQFPAD 306
+ APE I QSD+WS+G++L+EI + L N + K + VK D
Sbjct: 227 KWMAPESIFDCVYTVQSDVWSYGILLWEIFS----LGLNPYPGILVNSKFYKLVK----D 278
Query: 307 GKKFSMMIDPRL--RNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQE 361
G + M P +N YSI A C P RPT Q+ L+ QE
Sbjct: 279 GYQ---MAQPAFAPKNIYSIMQA---------CWALEPTHRPTFQQICSFLQEQAQE 323
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 107/216 (49%), Gaps = 18/216 (8%)
Query: 70 ATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLN-NHGLQGHK----QWLAE 124
AT+ + + +IG G +G+VYK P G VA+K + +G +G + +A
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKAR-DPHSGH----FVALKSVRVPNGEEGLPISTVREVAL 56
Query: 125 VQFLGVVSHPNLVKLLGYCSTE-DERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRL 183
++ L HPN+V+L+ C+T +R I+ LV+E++ ++ L L P LP +T
Sbjct: 57 LRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIK 115
Query: 184 EIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVST 243
+++ GL +LH +++RD K N+L+ KL+DFGLAR +
Sbjct: 116 DLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLAR---IYSYQMALF 169
Query: 244 AVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEIL 279
VV T Y APE + + D+WS G + E+
Sbjct: 170 PVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 102/210 (48%), Gaps = 11/210 (5%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPL-DGRGEPLVVAVKKLNNHGLQGHKQWLA-EVQFLGVV 131
R+ +GEG FG V P D GE VAVK L H L E++ L +
Sbjct: 11 LKRIRDLGEGHFGKVELCRYDPEGDNTGEQ--VAVKSLKPESGGNHIADLKKEIEILRNL 68
Query: 132 SHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAE 191
H N+VK G C+ + GI+ L+ E++P+ SL++ L + + + K +L+ + +
Sbjct: 69 YHENIVKYKGICTEDGGNGIK--LIMEFLPSGSLKEYL-PKNKNKINLKQQLKYAVQICK 125
Query: 192 GLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTG-DHTHVSTAVVGTYG 250
G+ YL Q ++RD NVL++ + K+ DFGL + T + V
Sbjct: 126 GMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVF 182
Query: 251 YAAPEYIETGHLKSQSDIWSFGVVLYEILT 280
+ APE + SD+WSFGV L+E+LT
Sbjct: 183 WYAPECLMQSKFYIASDVWSFGVTLHELLT 212
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 133/287 (46%), Gaps = 32/287 (11%)
Query: 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG-LQGHKQWLAEVQFLGVVSHPNLV 137
++G+G FG VY+G + + VA+K +N ++ ++L E + + ++V
Sbjct: 17 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 76
Query: 138 KLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFS-----RAQPTLPWKTRLEIILGA--- 189
+LLG S +G L++ E M L+ L S P L + ++I A
Sbjct: 77 RLLGVVS----QGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEI 132
Query: 190 AEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTY 249
A+G+AYL+ + ++RD N ++ +F K+ DFG+ R+ D +
Sbjct: 133 ADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPV 189
Query: 250 GYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKK 309
+ +PE ++ G + SD+WSFGVVL+EI T L E Q ++ +
Sbjct: 190 RWMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------------LAEQPYQGLSNEQV 234
Query: 310 FSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLK 356
+++ L ++ N + +L C + NP+ RP+ +++ S+K
Sbjct: 235 LRFVMEGGLLDKPD-NCPDMLLELMRMCWQYNPKMRPSFLEIISSIK 280
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 105/209 (50%), Gaps = 13/209 (6%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNH-GLQGHKQWLAEVQFLGVVS 132
F ++ +G G FG+VYKG P +G + VA+K+L + +K+ L E + V
Sbjct: 14 FKKIKVLGSGAFGTVYKGLWIP-EGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 72
Query: 133 HPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEG 192
+P++ +LLG C T + I +L+ + + + E + +Q L W ++ AEG
Sbjct: 73 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AEG 126
Query: 193 LAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLARE-GPTGDHTHVSTAVVGTYGY 251
+ YL + ++++RD NVL+ K++DFGLA+ G H V +
Sbjct: 127 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI-KW 182
Query: 252 AAPEYIETGHLKSQSDIWSFGVVLYEILT 280
A E I QSD+WS+GV ++E++T
Sbjct: 183 MALESILHRIYTHQSDVWSYGVTVWELMT 211
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 118/282 (41%), Gaps = 49/282 (17%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQG---HKQWLAEVQFLGVVSHPNL 136
+G+G FG+VY + ++A+K L L+ Q EV+ + HPN+
Sbjct: 18 LGKGKFGNVYLAR-----EKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNI 72
Query: 137 VKLLGYCSTEDERGIQRLLVYEYMP----NRSLEDRLFSRAQPTLPWKTRLEIILGAAEG 192
++L GY + L+ EY P R L+ Q T + T L A
Sbjct: 73 LRLYGYFHD----ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANA 122
Query: 193 LAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYA 252
L+Y H +VI+RD K N+LL + K+++FG + P+ T + GT Y
Sbjct: 123 LSYCHSK---RVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRT----TLCGTLDYL 175
Query: 253 APEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVK-QFPADGKKFS 311
PE IE + D+WS GV+ YE L G+ E N K + V+ FP
Sbjct: 176 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP------- 228
Query: 312 MMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVE 353
+ AR L LK NP +RP + +V+E
Sbjct: 229 ---------DFVTEGAR---DLISRLLKHNPSQRPMLREVLE 258
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 89/297 (29%), Positives = 126/297 (42%), Gaps = 42/297 (14%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWL-AEVQFLGVVS-HPNLV 137
+G G FG V + T L L VAVK L + K+ L +E++ + + H N+V
Sbjct: 46 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 105
Query: 138 KLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTL------PWKTR--LEIILGA 189
LLG C+ G L++ EY L + L +A+ L P + R L
Sbjct: 106 NLLGACT----HGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQV 161
Query: 190 AEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTY 249
A+G+A+L I+RD NVLL K+ DFGLAR+ + V
Sbjct: 162 AQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPV 218
Query: 250 GYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERN---RPTMEQKLLEWVKQFPAD 306
+ APE I QSD+WS+G++L+EI + L N + K + VK D
Sbjct: 219 KWMAPESIFDCVYTVQSDVWSYGILLWEIFS----LGLNPYPGILVNSKFYKLVK----D 270
Query: 307 GKKFSMMIDPRL--RNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQE 361
G + M P +N YSI A C P RPT Q+ L+ QE
Sbjct: 271 GYQ---MAQPAFAPKNIYSIMQA---------CWALEPTHRPTFQQICSFLQEQAQE 315
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 138/296 (46%), Gaps = 35/296 (11%)
Query: 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG-LQGHKQWLAEVQFLGVVSHPNLV 137
++G+G FG VY+G + + VA+K +N ++ ++L E + + ++V
Sbjct: 32 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 91
Query: 138 KLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFS-----RAQPTLPWKTRLEIILGA--- 189
+LLG S +G L++ E M L+ L S P L + ++I A
Sbjct: 92 RLLGVVS----QGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEI 147
Query: 190 AEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTY 249
A+G+AYL+ + ++RD N ++ +F K+ DFG+ R+ D+ +
Sbjct: 148 ADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 204
Query: 250 GYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKK 309
+ +PE ++ G + SD+WSFGVVL+EI T L E Q ++ +
Sbjct: 205 RWMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------------LAEQPYQGLSNEQV 249
Query: 310 FSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQESEQG 365
+++ L ++ N + +L C + NP+ RP+ +++ S+K +E E G
Sbjct: 250 LRFVMEGGLLDKPD-NCPDMLFELMRMCWQYNPKMRPSFLEIISSIK---EEMEPG 301
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 139/296 (46%), Gaps = 35/296 (11%)
Query: 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG-LQGHKQWLAEVQFLGVVSHPNLV 137
++G+G FG VY+G + + VA+K +N ++ ++L E + + ++V
Sbjct: 23 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 82
Query: 138 KLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFS-----RAQPTLPWKTRLEIILGA--- 189
+LLG S +G L++ E M L+ L S P L + ++I A
Sbjct: 83 RLLGVVS----QGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEI 138
Query: 190 AEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTY 249
A+G+AYL+ + ++RD N ++ +F K+ DFG+ R+ D+ +
Sbjct: 139 ADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 195
Query: 250 GYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKK 309
+ +PE ++ G + SD+WSFGVVL+EI T + E+ + E V +F +G
Sbjct: 196 RWMSPESLKDGVFTTYSDVWSFGVVLWEIAT---LAEQPYQGLSN---EQVLRFVMEG-- 247
Query: 310 FSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQESEQG 365
++ P N + +L C + NP+ RP+ +++ S+K +E E G
Sbjct: 248 -GLLDKPD-------NCPDMLFELMRMCWQYNPKMRPSFLEIISSIK---EEMEPG 292
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 138/296 (46%), Gaps = 35/296 (11%)
Query: 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG-LQGHKQWLAEVQFLGVVSHPNLV 137
++G+G FG VY+G + + VA+K +N ++ ++L E + + ++V
Sbjct: 25 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 84
Query: 138 KLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFS-----RAQPTLPWKTRLEIILGA--- 189
+LLG S +G L++ E M L+ L S P L + ++I A
Sbjct: 85 RLLGVVS----QGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEI 140
Query: 190 AEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTY 249
A+G+AYL+ + ++RD N ++ +F K+ DFG+ R+ D+ +
Sbjct: 141 ADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 197
Query: 250 GYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKK 309
+ +PE ++ G + SD+WSFGVVL+EI T L E Q ++ +
Sbjct: 198 RWMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------------LAEQPYQGLSNEQV 242
Query: 310 FSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQESEQG 365
+++ L ++ N + +L C + NP+ RP+ +++ S+K +E E G
Sbjct: 243 LRFVMEGGLLDKPD-NCPDMLFELMRMCWQYNPKMRPSFLEIISSIK---EEMEPG 294
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 139/296 (46%), Gaps = 35/296 (11%)
Query: 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG-LQGHKQWLAEVQFLGVVSHPNLV 137
++G+G FG VY+G + + VA+K +N ++ ++L E + + ++V
Sbjct: 54 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 113
Query: 138 KLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFS-----RAQPTLPWKTRLEIILGA--- 189
+LLG S +G L++ E M L+ L S P L + ++I A
Sbjct: 114 RLLGVVS----QGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEI 169
Query: 190 AEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTY 249
A+G+AYL+ + ++RD N ++ +F K+ DFG+ R+ D+ +
Sbjct: 170 ADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 226
Query: 250 GYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKK 309
+ +PE ++ G + SD+WSFGVVL+EI T + E+ + E V +F +G
Sbjct: 227 RWMSPESLKDGVFTTYSDVWSFGVVLWEIAT---LAEQPYQGLSN---EQVLRFVMEG-- 278
Query: 310 FSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQESEQG 365
++ P N + +L C + NP+ RP+ +++ S+K +E E G
Sbjct: 279 -GLLDKPD-------NCPDMLFELMRMCWQYNPKMRPSFLEIISSIK---EEMEPG 323
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 133/287 (46%), Gaps = 32/287 (11%)
Query: 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG-LQGHKQWLAEVQFLGVVSHPNLV 137
++G+G FG VY+G + + VA+K +N ++ ++L E + + ++V
Sbjct: 26 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 85
Query: 138 KLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFS-----RAQPTLPWKTRLEIILGA--- 189
+LLG S +G L++ E M L+ L S P L + ++I A
Sbjct: 86 RLLGVVS----QGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEI 141
Query: 190 AEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTY 249
A+G+AYL+ + ++RD N ++ +F K+ DFG+ R+ D +
Sbjct: 142 ADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPV 198
Query: 250 GYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKK 309
+ +PE ++ G + SD+WSFGVVL+EI T L E Q ++ +
Sbjct: 199 RWMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------------LAEQPYQGLSNEQV 243
Query: 310 FSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLK 356
+++ L ++ N + +L C + NP+ RP+ +++ S+K
Sbjct: 244 LRFVMEGGLLDKPD-NCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 289
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 135/287 (47%), Gaps = 32/287 (11%)
Query: 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG-LQGHKQWLAEVQFLGVVSHPNLV 137
++G+G FG VY+G + + VA+K +N ++ ++L E + + ++V
Sbjct: 19 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 78
Query: 138 KLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFS-----RAQPTLPWKTRLEIILGA--- 189
+LLG S +G L++ E M L+ L S P L + ++I A
Sbjct: 79 RLLGVVS----QGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEI 134
Query: 190 AEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTY 249
A+G+AYL+ + ++RD N ++ +F K+ DFG+ R+ D+ +
Sbjct: 135 ADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 191
Query: 250 GYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKK 309
+ +PE ++ G + SD+WSFGVVL+EI T + E+ + E V +F +G
Sbjct: 192 RWMSPESLKDGVFTTYSDVWSFGVVLWEIAT---LAEQPYQGLSN---EQVLRFVMEG-- 243
Query: 310 FSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLK 356
++ P N + +L C + NP+ RP+ +++ S+K
Sbjct: 244 -GLLDKPD-------NCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 282
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 135/287 (47%), Gaps = 32/287 (11%)
Query: 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG-LQGHKQWLAEVQFLGVVSHPNLV 137
++G+G FG VY+G + + VA+K +N ++ ++L E + + ++V
Sbjct: 26 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 85
Query: 138 KLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFS-----RAQPTLPWKTRLEIILGA--- 189
+LLG S +G L++ E M L+ L S P L + ++I A
Sbjct: 86 RLLGVVS----QGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEI 141
Query: 190 AEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTY 249
A+G+AYL+ + ++RD N ++ +F K+ DFG+ R+ D+ +
Sbjct: 142 ADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 198
Query: 250 GYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKK 309
+ +PE ++ G + SD+WSFGVVL+EI T + E+ + E V +F +G
Sbjct: 199 RWMSPESLKDGVFTTYSDVWSFGVVLWEIAT---LAEQPYQGLSN---EQVLRFVMEG-- 250
Query: 310 FSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLK 356
++ P N + +L C + NP+ RP+ +++ S+K
Sbjct: 251 -GLLDKPD-------NCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 289
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 139/296 (46%), Gaps = 35/296 (11%)
Query: 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG-LQGHKQWLAEVQFLGVVSHPNLV 137
++G+G FG VY+G + + VA+K +N ++ ++L E + + ++V
Sbjct: 25 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 84
Query: 138 KLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFS-----RAQPTLPWKTRLEIILGA--- 189
+LLG S +G L++ E M L+ L S P L + ++I A
Sbjct: 85 RLLGVVS----QGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEI 140
Query: 190 AEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTY 249
A+G+AYL+ + ++RD N ++ +F K+ DFG+ R+ D+ +
Sbjct: 141 ADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 197
Query: 250 GYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKK 309
+ +PE ++ G + SD+WSFGVVL+EI T + E+ + E V +F +G
Sbjct: 198 RWMSPESLKDGVFTTYSDVWSFGVVLWEIAT---LAEQPYQGLSN---EQVLRFVMEG-- 249
Query: 310 FSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQESEQG 365
++ P N + +L C + NP+ RP+ +++ S+K +E E G
Sbjct: 250 -GLLDKPD-------NCPDMLFELMRMCWQYNPKMRPSFLEIISSIK---EEMEPG 294
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 108/227 (47%), Gaps = 28/227 (12%)
Query: 60 RVFDMQELREATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNN-HGLQGH 118
R+F ELR ++ +G G FG+V+KG P +G + V +K + + G Q
Sbjct: 8 RIFKETELR-------KLKVLGSGVFGTVHKGVWIP-EGESIKIPVCIKVIEDKSGRQSF 59
Query: 119 KQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSR-----A 173
+ + +G + H ++V+LLG C G LV +Y+P SL D +
Sbjct: 60 QAVTDHMLAIGSLDHAHIVRLLGLCP-----GSSLQLVTQYLPLGSLLDHVRQHRGALGP 114
Query: 174 QPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREG 233
Q L W ++ A+G+ YL E +++R+ NVLL + +++DFG+A
Sbjct: 115 QLLLNWGVQI------AKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVADLL 165
Query: 234 PTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILT 280
P D + + + A E I G QSD+WS+GV ++E++T
Sbjct: 166 PPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMT 212
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 117/282 (41%), Gaps = 49/282 (17%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQG---HKQWLAEVQFLGVVSHPNL 136
+G+G FG+VY + ++A+K L L+ Q EV+ + HPN+
Sbjct: 18 LGKGKFGNVYLAR-----EKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNI 72
Query: 137 VKLLGYCSTEDERGIQRLLVYEYMP----NRSLEDRLFSRAQPTLPWKTRLEIILGAAEG 192
++L GY + L+ EY P R L+ Q T + T L A
Sbjct: 73 LRLYGYFHD----ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANA 122
Query: 193 LAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYA 252
L+Y H +VI+RD K N+LL + K++DFG + P+ + GT Y
Sbjct: 123 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRX----XLCGTLDYL 175
Query: 253 APEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVK-QFPADGKKFS 311
PE IE + D+WS GV+ YE L G+ E N K + V+ FP
Sbjct: 176 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP------- 228
Query: 312 MMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVE 353
+ AR L LK NP +RP + +V+E
Sbjct: 229 ---------DFVTEGAR---DLISRLLKHNPSQRPMLREVLE 258
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 117/282 (41%), Gaps = 49/282 (17%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQG---HKQWLAEVQFLGVVSHPNL 136
+G+G FG+VY + ++A+K L L+ Q EV+ + HPN+
Sbjct: 17 LGKGKFGNVYLAR-----EKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNI 71
Query: 137 VKLLGYCSTEDERGIQRLLVYEYMP----NRSLEDRLFSRAQPTLPWKTRLEIILGAAEG 192
++L GY + L+ EY P R L+ Q T + T L A
Sbjct: 72 LRLYGYFHD----ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANA 121
Query: 193 LAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYA 252
L+Y H +VI+RD K N+LL + K++DFG + P+ + GT Y
Sbjct: 122 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRD----TLCGTLDYL 174
Query: 253 APEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVK-QFPADGKKFS 311
PE IE + D+WS GV+ YE L G+ E N K + V+ FP
Sbjct: 175 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP------- 227
Query: 312 MMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVE 353
+ AR L LK NP +RP + +V+E
Sbjct: 228 ---------DFVTEGAR---DLISRLLKHNPSQRPMLREVLE 257
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 118/282 (41%), Gaps = 49/282 (17%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQG---HKQWLAEVQFLGVVSHPNL 136
+G+G FG+VY + ++A+K L L+ Q EV+ + HPN+
Sbjct: 19 LGKGKFGNVYLAR-----EKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNI 73
Query: 137 VKLLGYCSTEDERGIQRLLVYEYMP----NRSLEDRLFSRAQPTLPWKTRLEIILGAAEG 192
++L GY + L+ EY P R L+ Q T + T L A
Sbjct: 74 LRLYGYFHD----ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANA 123
Query: 193 LAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYA 252
L+Y H +VI+RD K N+LL + K+++FG + P+ T + GT Y
Sbjct: 124 LSYCHSK---RVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRT----TLCGTLDYL 176
Query: 253 APEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVK-QFPADGKKFS 311
PE IE + D+WS GV+ YE L G+ E N K + V+ FP
Sbjct: 177 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP------- 229
Query: 312 MMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVE 353
+ AR L LK NP +RP + +V+E
Sbjct: 230 ---------DFVTEGAR---DLISRLLKHNPSQRPMLREVLE 259
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 139/298 (46%), Gaps = 39/298 (13%)
Query: 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG-LQGHKQWLAEVQFLGVVSHPNLV 137
++G+G FG VY+G + + VA+K +N ++ ++L E + + ++V
Sbjct: 22 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 81
Query: 138 KLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSR----------AQPTLPWKTRLEIIL 187
+LLG S +G L++ E M L+ L S A P+L +++
Sbjct: 82 RLLGVVS----QGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSL--SKMIQMAG 135
Query: 188 GAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVG 247
A+G+AYL+ + ++RD N ++ +F K+ DFG+ R+ D+ +
Sbjct: 136 EIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLL 192
Query: 248 TYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADG 307
+ +PE ++ G + SD+WSFGVVL+EI T + E+ + E V +F +G
Sbjct: 193 PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT---LAEQPYQGLSN---EQVLRFVMEG 246
Query: 308 KKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQESEQG 365
++ P N + +L C + NP+ RP+ +++ S+K +E E G
Sbjct: 247 ---GLLDKPD-------NCPDMLFELMRMCWQYNPKMRPSFLEIISSIK---EEMEPG 291
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 138/298 (46%), Gaps = 39/298 (13%)
Query: 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG-LQGHKQWLAEVQFLGVVSHPNLV 137
++G+G FG VY+G + + VA+K +N ++ ++L E + + ++V
Sbjct: 32 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 91
Query: 138 KLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSR----------AQPTLPWKTRLEIIL 187
+LLG S +G L++ E M L+ L S A P+L +++
Sbjct: 92 RLLGVVS----QGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSL--SKMIQMAG 145
Query: 188 GAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVG 247
A+G+AYL+ + ++RD N ++ +F K+ DFG+ R+ D+ +
Sbjct: 146 EIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLL 202
Query: 248 TYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADG 307
+ +PE ++ G + SD+WSFGVVL+EI T L E Q ++
Sbjct: 203 PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------------LAEQPYQGLSNE 247
Query: 308 KKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQESEQG 365
+ +++ L ++ N + +L C + NP+ RP+ +++ S+K +E E G
Sbjct: 248 QVLRFVMEGGLLDKPD-NCPDMLFELMRMCWQYNPKMRPSFLEIISSIK---EEMEPG 301
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 117/282 (41%), Gaps = 49/282 (17%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQG---HKQWLAEVQFLGVVSHPNL 136
+G+G FG+VY + ++A+K L L+ Q EV+ + HPN+
Sbjct: 19 LGKGKFGNVYLAR-----EKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNI 73
Query: 137 VKLLGYCSTEDERGIQRLLVYEYMP----NRSLEDRLFSRAQPTLPWKTRLEIILGAAEG 192
++L GY + L+ EY P R L+ Q T + T L A
Sbjct: 74 LRLYGYFHD----ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANA 123
Query: 193 LAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYA 252
L+Y H +VI+RD K N+LL + K++DFG + P+ + GT Y
Sbjct: 124 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----RXXLCGTLDYL 176
Query: 253 APEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVK-QFPADGKKFS 311
PE IE + D+WS GV+ YE L G+ E N K + V+ FP
Sbjct: 177 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP------- 229
Query: 312 MMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVE 353
+ AR L LK NP +RP + +V+E
Sbjct: 230 ---------DFVTEGAR---DLISRLLKHNPSQRPMLREVLE 259
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 110/212 (51%), Gaps = 19/212 (8%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQ--FLGVV 131
F + +G+G FG V+ ++ + G + A+K L L+ + +++ L V
Sbjct: 26 FELLKVLGQGSFGKVF--LVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV 83
Query: 132 SHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGA-A 190
+HP +VKL TE + L+ +++ L RL ++ + + ++ L A
Sbjct: 84 NHPFIVKLHYAFQTEG----KLYLILDFLRGGDLFTRL---SKEVMFTEEDVKFYLAELA 136
Query: 191 EGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYG 250
L +LH + +IYRD K N+LLD KL+DFGL++E + DH + + GT
Sbjct: 137 LALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKE--SIDHEKKAYSFCGTVE 191
Query: 251 YAAPEYIET-GHLKSQSDIWSFGVVLYEILTG 281
Y APE + GH +S +D WSFGV+++E+LTG
Sbjct: 192 YMAPEVVNRRGHTQS-ADWWSFGVLMFEMLTG 222
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 117/282 (41%), Gaps = 49/282 (17%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQG---HKQWLAEVQFLGVVSHPNL 136
+G+G FG+VY + ++A+K L L+ Q EV+ + HPN+
Sbjct: 42 LGKGKFGNVYLAR-----EKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNI 96
Query: 137 VKLLGYCSTEDERGIQRLLVYEYMP----NRSLEDRLFSRAQPTLPWKTRLEIILGAAEG 192
++L GY + L+ EY P R L+ Q T + T L A
Sbjct: 97 LRLYGYFHD----ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANA 146
Query: 193 LAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYA 252
L+Y H +VI+RD K N+LL + K++DFG + P+ + GT Y
Sbjct: 147 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDL----CGTLDYL 199
Query: 253 APEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVK-QFPADGKKFS 311
PE IE + D+WS GV+ YE L G+ E N K + V+ FP
Sbjct: 200 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP------- 252
Query: 312 MMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVE 353
+ AR L LK NP +RP + +V+E
Sbjct: 253 ---------DFVTEGAR---DLISRLLKHNPSQRPMLREVLE 282
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 125/301 (41%), Gaps = 40/301 (13%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLN-NHGLQGHKQWLAEVQFLGVV-SHPNLV 137
+G G FG V + T L + VAVK L + L + ++E++ L + +H N+V
Sbjct: 47 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 106
Query: 138 KLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILG--------- 188
LLG C+ G L++ EY L + L + + KT I+
Sbjct: 107 NLLGACTI----GGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLED 162
Query: 189 -------AAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHV 241
A+G+A+L I+RD N+LL K+ DFGLAR+ + V
Sbjct: 163 LLSFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVV 219
Query: 242 STAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVK 301
+ APE I +SD+WS+G+ L+E+ + + P M
Sbjct: 220 KGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS---LGSSPYPGM--------- 267
Query: 302 QFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQE 361
P D KF MI R +A + + C +P +RPT Q+V+ ++ + E
Sbjct: 268 --PVDS-KFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISE 324
Query: 362 S 362
S
Sbjct: 325 S 325
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 127/283 (44%), Gaps = 38/283 (13%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSH 133
F+ + K+GEG +GSVYK I G+ +VA+K++ ++ + E+ +
Sbjct: 31 FDVLEKLGEGSYGSVYKA-IHKETGQ----IVAIKQVPVES--DLQEIIKEISIMQQCDS 83
Query: 134 PNLVKLLG-YCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEG 192
P++VK G Y D +V EY S+ D + R + TL I+ +G
Sbjct: 84 PHVVKYYGSYFKNTD-----LWIVMEYCGAGSVSDIIRLRNK-TLTEDEIATILQSTLKG 137
Query: 193 LAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYA 252
L YLH ++ I+RD K N+LL+ KL+DFG+A G D V+GT +
Sbjct: 138 LEYLHF---MRKIHRDIKAGNILLNTEGHAKLADFGVA--GQLTDXMAKRNXVIGTPFWM 192
Query: 253 APEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKFSM 312
APE I+ +DIWS G+ E+ G+ P + + + P +
Sbjct: 193 APEVIQEIGYNCVADIWSLGITAIEMAEGK------PPYADIHPMRAIFMIPTNPP---- 242
Query: 313 MIDPRLRNQ--YSINAARRVAKLADNCLKKNPEERPTMNQVVE 353
P R +S N V + CL K+PE+R T Q+++
Sbjct: 243 ---PTFRKPELWSDNFTDFVKQ----CLVKSPEQRATATQLLQ 278
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 124/294 (42%), Gaps = 41/294 (13%)
Query: 80 IGEGGFGSVYKGTIRPLDGRG--EPLVVAVKKLNNHGLQGH-KQWLAEVQFLGVVS-HPN 135
+GEG FG V +D E + VAVK L + + ++E++ + ++ H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 136 LVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPW--------------KT 181
++ LLG C+ + + + EY +L + L +R P + + K
Sbjct: 103 IINLLGACTQDGPLYV----IVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 182 RLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHV 241
+ A G+ YL + I+RD NVL+ N K++DFGLAR+ D+
Sbjct: 159 LVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKN 215
Query: 242 STAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVK 301
+T + APE + QSD+WSFGV+++EI T P ++L + +K
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV--EELFKLLK 273
Query: 302 QFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESL 355
+ R N + + +C P +RPT Q+VE L
Sbjct: 274 E--------------GHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 313
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 110/212 (51%), Gaps = 19/212 (8%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQ--FLGVV 131
F + +G+G FG V+ ++ + G + A+K L L+ + +++ L V
Sbjct: 27 FELLKVLGQGSFGKVF--LVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV 84
Query: 132 SHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGA-A 190
+HP +VKL TE + L+ +++ L RL ++ + + ++ L A
Sbjct: 85 NHPFIVKLHYAFQTEG----KLYLILDFLRGGDLFTRL---SKEVMFTEEDVKFYLAELA 137
Query: 191 EGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYG 250
L +LH + +IYRD K N+LLD KL+DFGL++E + DH + + GT
Sbjct: 138 LALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKE--SIDHEKKAYSFCGTVE 192
Query: 251 YAAPEYIET-GHLKSQSDIWSFGVVLYEILTG 281
Y APE + GH +S +D WSFGV+++E+LTG
Sbjct: 193 YMAPEVVNRRGHTQS-ADWWSFGVLMFEMLTG 223
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 105/209 (50%), Gaps = 13/209 (6%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNH-GLQGHKQWLAEVQFLGVVS 132
F ++ +G G FG+VYKG P +G + VA+K+L + +K+ L E + V
Sbjct: 27 FKKIKVLGSGAFGTVYKGLWIP-EGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 85
Query: 133 HPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEG 192
+P++ +LLG C T + I +L+ + + + E + +Q L W ++ A+G
Sbjct: 86 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 139
Query: 193 LAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLARE-GPTGDHTHVSTAVVGTYGY 251
+ YL + ++++RD NVL+ K++DFGLA+ G H V +
Sbjct: 140 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI-KW 195
Query: 252 AAPEYIETGHLKSQSDIWSFGVVLYEILT 280
A E I QSD+WS+GV ++E++T
Sbjct: 196 MALESILHRIYTHQSDVWSYGVTVWELMT 224
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 110/212 (51%), Gaps = 19/212 (8%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQ--FLGVV 131
F + +G+G FG V+ ++ + G + A+K L L+ + +++ L V
Sbjct: 26 FELLKVLGQGSFGKVF--LVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV 83
Query: 132 SHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGA-A 190
+HP +VKL TE + L+ +++ L RL ++ + + ++ L A
Sbjct: 84 NHPFIVKLHYAFQTEG----KLYLILDFLRGGDLFTRL---SKEVMFTEEDVKFYLAELA 136
Query: 191 EGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYG 250
L +LH + +IYRD K N+LLD KL+DFGL++E + DH + + GT
Sbjct: 137 LALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKE--SIDHEKKAYSFCGTVE 191
Query: 251 YAAPEYIET-GHLKSQSDIWSFGVVLYEILTG 281
Y APE + GH +S +D WSFGV+++E+LTG
Sbjct: 192 YMAPEVVNRRGHTQS-ADWWSFGVLMFEMLTG 222
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 127/282 (45%), Gaps = 37/282 (13%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLN-NHGLQGHKQWLAEVQFLGVVS 132
F ++ KIG+G FG V+KG +D R + VVA+K ++ + E+ L
Sbjct: 9 FTKLEKIGKGSFGEVFKG----IDNRTQK-VVAIKIIDLEEAEDEIEDIQQEITVLSQCD 63
Query: 133 HPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIIL-GAAE 191
P + K G + + I + EY+ S D L +P +T++ IL +
Sbjct: 64 SPYVTKYYGSYLKDTKLWI----IMEYLGGGSALDLL----EPGPLDETQIATILREILK 115
Query: 192 GLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGY 251
GL YLH + I+RD K +NVLL + + KL+DFG+A G D VGT +
Sbjct: 116 GLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKRNTFVGTPFW 170
Query: 252 AAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKFS 311
APE I+ S++DIWS G+ E+ G P E ++ + P +
Sbjct: 171 MAPEVIKQSAYDSKADIWSLGITAIELARGE------PPHSELHPMKVLFLIPKNNP--- 221
Query: 312 MMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVE 353
P L YS + + + + CL K P RPT ++++
Sbjct: 222 ----PTLEGNYS----KPLKEFVEACLNKEPSFRPTAKELLK 255
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 124/294 (42%), Gaps = 41/294 (13%)
Query: 80 IGEGGFGSVYKGTIRPLDGRG--EPLVVAVKKLNNHGLQGH-KQWLAEVQFLGVVS-HPN 135
+GEG FG V +D E + VAVK L + + ++E++ + ++ H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKN 102
Query: 136 LVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPW--------------KT 181
++ LLG C+ + + + EY +L + L +R P + + K
Sbjct: 103 IINLLGACTQDGPLYV----IVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 182 RLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHV 241
+ A G+ YL + I+RD NVL+ N K++DFGLAR+ D+
Sbjct: 159 LVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 215
Query: 242 STAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVK 301
+T + APE + QSD+WSFGV+++EI T P ++L + +K
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV--EELFKLLK 273
Query: 302 QFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESL 355
+ R N + + +C P +RPT Q+VE L
Sbjct: 274 E--------------GHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 313
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 124/294 (42%), Gaps = 41/294 (13%)
Query: 80 IGEGGFGSVYKGTIRPLDGRG--EPLVVAVKKLNNHGLQGH-KQWLAEVQFLGVVS-HPN 135
+GEG FG V +D E + VAVK L + + ++E++ + ++ H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 136 LVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPW--------------KT 181
++ LLG C+ + + + EY +L + L +R P + + K
Sbjct: 103 IITLLGACTQDGPLYV----IVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 182 RLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHV 241
+ A G+ YL + I+RD NVL+ N K++DFGLAR+ D+
Sbjct: 159 LVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 215
Query: 242 STAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVK 301
+T + APE + QSD+WSFGV+++EI T P ++L + +K
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV--EELFKLLK 273
Query: 302 QFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESL 355
+ R N + + +C P +RPT Q+VE L
Sbjct: 274 E--------------GHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 313
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 124/294 (42%), Gaps = 41/294 (13%)
Query: 80 IGEGGFGSVYKGTIRPLDGRG--EPLVVAVKKLNNHGLQGH-KQWLAEVQFLGVVS-HPN 135
+GEG FG V +D E + VAVK L + + ++E++ + ++ H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 136 LVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPW--------------KT 181
++ LLG C+ + + + EY +L + L +R P + + K
Sbjct: 103 IIHLLGACTQDGPLYV----IVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 182 RLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHV 241
+ A G+ YL + I+RD NVL+ N K++DFGLAR+ D+
Sbjct: 159 LVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 215
Query: 242 STAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVK 301
+T + APE + QSD+WSFGV+++EI T P ++L + +K
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV--EELFKLLK 273
Query: 302 QFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESL 355
+ R N + + +C P +RPT Q+VE L
Sbjct: 274 E--------------GHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 313
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 132/293 (45%), Gaps = 38/293 (12%)
Query: 64 MQELR-EATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLN-NHGLQGHKQW 121
MQ L+ + F ++ KIG+G FG V+KG +D R + VVA+K ++ +
Sbjct: 13 MQNLKADPEELFTKLEKIGKGSFGEVFKG----IDNRTQK-VVAIKIIDLEEAEDEIEDI 67
Query: 122 LAEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKT 181
E+ L P + K G + + I + EY+ S D L +P +T
Sbjct: 68 QQEITVLSQCDSPYVTKYYGSYLKDTKLWI----IMEYLGGGSALDLL----EPGPLDET 119
Query: 182 RLEIIL-GAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTH 240
++ IL +GL YLH + I+RD K +NVLL + + KL+DFG+A G D
Sbjct: 120 QIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQI 174
Query: 241 VSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWV 300
VGT + APE I+ S++DIWS G+ E+ G P E ++ +
Sbjct: 175 KRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGE------PPHSELHPMKVL 228
Query: 301 KQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVE 353
P + P L YS + + + + CL K P RPT ++++
Sbjct: 229 FLIPKNNP-------PTLEGNYS----KPLKEFVEACLNKEPSFRPTAKELLK 270
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 110/219 (50%), Gaps = 21/219 (9%)
Query: 70 ATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGH-KQWLAEVQFL 128
+++ F ++ K+G G + +VYKG + + VA+K++ +G + E+ +
Sbjct: 3 SSSQFKQLEKLGNGTYATVYKGL-----NKTTGVYVALKEVKLDSEEGTPSTAIREISLM 57
Query: 129 GVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEII-- 186
+ H N+V+L TE+ + LV+E+M N L+ + SR P L ++
Sbjct: 58 KELKHENIVRLYDVIHTEN----KLTLVFEFMDN-DLKKYMDSRTVGNTPRGLELNLVKY 112
Query: 187 --LGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTA 244
+GLA+ HE ++++RD K N+L++ + KL DFGLAR +T S
Sbjct: 113 FQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEV 169
Query: 245 VVGTYGYAAPEYIETGHLKSQS-DIWSFGVVLYEILTGR 282
V T Y AP+ + S S DIWS G +L E++TG+
Sbjct: 170 V--TLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGK 206
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 127/282 (45%), Gaps = 37/282 (13%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLN-NHGLQGHKQWLAEVQFLGVVS 132
F ++ KIG+G FG V+KG +D R + VVA+K ++ + E+ L
Sbjct: 9 FTKLEKIGKGSFGEVFKG----IDNRTQK-VVAIKIIDLEEAEDEIEDIQQEITVLSQCD 63
Query: 133 HPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIIL-GAAE 191
P + K G + + I + EY+ S D L +P +T++ IL +
Sbjct: 64 SPYVTKYYGSYLKDTKLWI----IMEYLGGGSALDLL----EPGPLDETQIATILREILK 115
Query: 192 GLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGY 251
GL YLH + I+RD K +NVLL + + KL+DFG+A G D VGT +
Sbjct: 116 GLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKRNXFVGTPFW 170
Query: 252 AAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKFS 311
APE I+ S++DIWS G+ E+ G P E ++ + P +
Sbjct: 171 MAPEVIKQSAYDSKADIWSLGITAIELARGE------PPHSELHPMKVLFLIPKNNP--- 221
Query: 312 MMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVE 353
P L YS + + + + CL K P RPT ++++
Sbjct: 222 ----PTLEGNYS----KPLKEFVEACLNKEPSFRPTAKELLK 255
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 95/203 (46%), Gaps = 8/203 (3%)
Query: 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVK 138
++G+G FGSV PL G +VAVK+L + G + + E+Q L + +VK
Sbjct: 14 QLGKGNFGSVELCRYDPL-GDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK 72
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHE 198
G ++ LV EY+P+ L D L R + L L +G+ YL
Sbjct: 73 YRGVSYGPGRPELR--LVMEYLPSGCLRDFL-QRHRARLDASRLLLYSSQICKGMEYLGS 129
Query: 199 GLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTG-DHTHVSTAVVGTYGYAAPEYI 257
+ ++RD N+L++ K++DFGLA+ P D V + APE +
Sbjct: 130 R---RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESL 186
Query: 258 ETGHLKSQSDIWSFGVVLYEILT 280
QSD+WSFGVVLYE+ T
Sbjct: 187 SDNIFSRQSDVWSFGVVLYELFT 209
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 125/301 (41%), Gaps = 40/301 (13%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLN-NHGLQGHKQWLAEVQFLGVV-SHPNLV 137
+G G FG V + T L + VAVK L + L + ++E++ L + +H N+V
Sbjct: 49 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 108
Query: 138 KLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILG--------- 188
LLG C+ G L++ EY L + L + + KT I+
Sbjct: 109 NLLGACTI----GGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLED 164
Query: 189 -------AAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHV 241
A+G+A+L I+RD N+LL K+ DFGLAR+ + V
Sbjct: 165 LLSFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVV 221
Query: 242 STAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVK 301
+ APE I +SD+WS+G+ L+E+ + + P M
Sbjct: 222 KGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS---LGSSPYPGM--------- 269
Query: 302 QFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQE 361
P D KF MI R +A + + C +P +RPT Q+V+ ++ + E
Sbjct: 270 --PVDS-KFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISE 326
Query: 362 S 362
S
Sbjct: 327 S 327
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 108/213 (50%), Gaps = 20/213 (9%)
Query: 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQG--HKQWLAEVQFLG 129
+ F R+ ++G G G V K RP ++ +KL + ++ Q + E+Q L
Sbjct: 16 DDFERISELGAGNGGVVTKVQHRPSG------LIMARKLIHLEIKPAIRNQIIRELQVLH 69
Query: 130 VVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGA 189
+ P +V G ++ E I E+M SL D++ A+ +P + ++ +
Sbjct: 70 ECNSPYIVGFYGAFYSDGEISI----CMEHMDGGSL-DQVLKEAK-RIPEEILGKVSIAV 123
Query: 190 AEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTY 249
GLAYL E + Q+++RD K SN+L++ + KL DFG++ G D ++ + VGT
Sbjct: 124 LRGLAYLRE--KHQIMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--MANSFVGTR 177
Query: 250 GYAAPEYIETGHLKSQSDIWSFGVVLYEILTGR 282
Y APE ++ H QSDIWS G+ L E+ GR
Sbjct: 178 SYMAPERLQGTHYSVQSDIWSMGLSLVELAVGR 210
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 125/301 (41%), Gaps = 40/301 (13%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLN-NHGLQGHKQWLAEVQFLGVV-SHPNLV 137
+G G FG V + T L + VAVK L + L + ++E++ L + +H N+V
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 113
Query: 138 KLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILG--------- 188
LLG C+ G L++ EY L + L + + KT I+
Sbjct: 114 NLLGACTI----GGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLED 169
Query: 189 -------AAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHV 241
A+G+A+L I+RD N+LL K+ DFGLAR+ + V
Sbjct: 170 LLSFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVV 226
Query: 242 STAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVK 301
+ APE I +SD+WS+G+ L+E+ + + P M
Sbjct: 227 KGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS---LGSSPYPGM--------- 274
Query: 302 QFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQE 361
P D KF MI R +A + + C +P +RPT Q+V+ ++ + E
Sbjct: 275 --PVDS-KFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISE 331
Query: 362 S 362
S
Sbjct: 332 S 332
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 134/287 (46%), Gaps = 32/287 (11%)
Query: 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG-LQGHKQWLAEVQFLGVVSHPNLV 137
++G+G FG VY+G + + VA+K +N ++ ++L E + + ++V
Sbjct: 19 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 78
Query: 138 KLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFS-----RAQPTLPWKTRLEIILGA--- 189
+LLG S +G L++ E M L+ L S P L + ++I A
Sbjct: 79 RLLGVVS----QGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEI 134
Query: 190 AEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTY 249
A+G+AYL+ + ++RD N + +F K+ DFG+ R+ D+ +
Sbjct: 135 ADGMAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 191
Query: 250 GYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKK 309
+ +PE ++ G + SD+WSFGVVL+EI T + E+ + E V +F +G
Sbjct: 192 RWMSPESLKDGVFTTYSDVWSFGVVLWEIAT---LAEQPYQGLSN---EQVLRFVMEG-- 243
Query: 310 FSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLK 356
++ P N + +L C + NP+ RP+ +++ S+K
Sbjct: 244 -GLLDKPD-------NCPDMLLELMRMCWQYNPKMRPSFLEIISSIK 282
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 117/282 (41%), Gaps = 49/282 (17%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQG---HKQWLAEVQFLGVVSHPNL 136
+G+G FG+VY + ++A+K L L+ Q EV+ + HPN+
Sbjct: 16 LGKGKFGNVYLAR-----EKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNI 70
Query: 137 VKLLGYCSTEDERGIQRLLVYEYMP----NRSLEDRLFSRAQPTLPWKTRLEIILGAAEG 192
++L GY + L+ EY P R L+ Q T + T L A
Sbjct: 71 LRLYGYFHD----ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANA 120
Query: 193 LAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYA 252
L+Y H +VI+RD K N+LL + K++DFG + P+ + GT Y
Sbjct: 121 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRX----XLCGTLDYL 173
Query: 253 APEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVK-QFPADGKKFS 311
PE IE + D+WS GV+ YE L G+ E N K + V+ FP
Sbjct: 174 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP------- 226
Query: 312 MMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVE 353
+ AR L LK NP +RP + +V+E
Sbjct: 227 ---------DFVTEGAR---DLISRLLKHNPSQRPMLREVLE 256
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 127/283 (44%), Gaps = 33/283 (11%)
Query: 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHK---QWLAEVQFLGVVSHPN 135
KIG G F VY+ LDG + VA+KK+ L K + E+ L ++HPN
Sbjct: 39 KIGRGQFSEVYRAACL-LDG----VPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPN 93
Query: 136 LVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAY 195
++K Y S ++ + +L + S + F + + +P +T + + L +
Sbjct: 94 VIKY--YASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEH 151
Query: 196 LHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPE 255
+H +V++RD K +NV + KL D GL R T + ++VGT Y +PE
Sbjct: 152 MHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRF--FSSKTTAAHSLVGTPYYMSPE 206
Query: 256 YIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQ--FPADGKKFSMM 313
I +SDIWS G +LYE+ + ++ + L + ++Q +P
Sbjct: 207 RIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNL-YSLCKKIEQCDYP--------- 256
Query: 314 IDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLK 356
P + YS + +L + C+ +PE+RP + V + K
Sbjct: 257 --PLPSDHYS----EELRQLVNMCINPDPEKRPDVTYVYDVAK 293
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 105/209 (50%), Gaps = 13/209 (6%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNH-GLQGHKQWLAEVQFLGVVS 132
F ++ +G G FG+VYKG P +G + VA+K+L + +K+ L E + V
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIP-EGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 133 HPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEG 192
+P++ +LLG C T + I +L+ + + + E + +Q L W ++ A+G
Sbjct: 76 NPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 129
Query: 193 LAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLARE-GPTGDHTHVSTAVVGTYGY 251
+ YL + ++++RD NVL+ K++DFGLA+ G H V +
Sbjct: 130 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI-KW 185
Query: 252 AAPEYIETGHLKSQSDIWSFGVVLYEILT 280
A E I QSD+WS+GV ++E++T
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 125/294 (42%), Gaps = 41/294 (13%)
Query: 80 IGEGGFGSVYKGTIRPLDGRG--EPLVVAVKKLNNHGLQGH-KQWLAEVQFLGVVS-HPN 135
+GEG FG V +D E + VAVK L + + ++E++ + ++ H N
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 148
Query: 136 LVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQP--------------TLPWKT 181
++ LLG C+ + + + EY +L + L +R P + +K
Sbjct: 149 IINLLGACTQDGPLYV----IVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 204
Query: 182 RLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHV 241
+ A G+ YL + I+RD NVL+ N K++DFGLAR+ D+
Sbjct: 205 LVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 261
Query: 242 STAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVK 301
+T + APE + QSD+WSFGV+++EI T P ++L + +K
Sbjct: 262 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV--EELFKLLK 319
Query: 302 QFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESL 355
+ G R N + + +C P +RPT Q+VE L
Sbjct: 320 E----GH----------RMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 359
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 125/301 (41%), Gaps = 40/301 (13%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLN-NHGLQGHKQWLAEVQFLGVV-SHPNLV 137
+G G FG V + T L + VAVK L + L + ++E++ L + +H N+V
Sbjct: 31 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 90
Query: 138 KLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILG--------- 188
LLG C+ G L++ EY L + L + + KT I+
Sbjct: 91 NLLGACTI----GGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLED 146
Query: 189 -------AAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHV 241
A+G+A+L I+RD N+LL K+ DFGLAR+ + V
Sbjct: 147 LLSFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVV 203
Query: 242 STAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVK 301
+ APE I +SD+WS+G+ L+E+ + + P M
Sbjct: 204 KGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS---LGSSPYPGM--------- 251
Query: 302 QFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQE 361
P D KF MI R +A + + C +P +RPT Q+V+ ++ + E
Sbjct: 252 --PVDS-KFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISE 308
Query: 362 S 362
S
Sbjct: 309 S 309
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 105/209 (50%), Gaps = 13/209 (6%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNH-GLQGHKQWLAEVQFLGVVS 132
F ++ +G G FG+VYKG P +G + VA+K+L + +K+ L E + V
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIP-EGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 76
Query: 133 HPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEG 192
+P++ +LLG C T + I +L+ + + + E + +Q L W ++ A+G
Sbjct: 77 NPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 130
Query: 193 LAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLARE-GPTGDHTHVSTAVVGTYGY 251
+ YL + ++++RD NVL+ K++DFGLA+ G H V +
Sbjct: 131 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI-KW 186
Query: 252 AAPEYIETGHLKSQSDIWSFGVVLYEILT 280
A E I QSD+WS+GV ++E++T
Sbjct: 187 MALESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 131/281 (46%), Gaps = 38/281 (13%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNN-HGLQGHKQWLAEVQFLGVVSHPNLVK 138
IG+G FG VY G +D + A+K L+ +Q + +L E + ++HPN++
Sbjct: 29 IGKGHFGVVYHGEY--IDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLA 86
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFS-RAQPTLPWKTRLEIILGAAEGLAYLH 197
L+G + G+ +L+ YM + L + S + PT+ K + L A G+ YL
Sbjct: 87 LIGIMLPPE--GLPHVLL-PYMCHGDLLQFIRSPQRNPTV--KDLISFGLQVARGMEYLA 141
Query: 198 EGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLARE------GPTGDHTHVSTAVVGTYGY 251
E + ++RD N +LD +F K++DFGLAR+ H H V +
Sbjct: 142 EQ---KFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPV----KW 194
Query: 252 AAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKFS 311
A E ++T ++SD+WSFGV+L+E+LT R P + F A G++
Sbjct: 195 TALESLQTYRFTTKSDVWSFGVLLWELLT------RGAPPYRHIDPFDLTHFLAQGRRLP 248
Query: 312 MMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVV 352
+ +Y ++ +V + C + +P RPT +V
Sbjct: 249 -------QPEYCPDSLYQVMQ---QCWEADPAVRPTFRVLV 279
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 128/305 (41%), Gaps = 56/305 (18%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLN-NHGLQGHKQWLAEVQFLGVVSHPNLVK 138
+GEG FG V K T L GR VAVK L N + L+E L V+HP+++K
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRA------------------------Q 174
L G CS + LL+ EY SL R F R +
Sbjct: 91 LYGACSQDGPL----LLIVEYAKYGSL--RGFLRESRKVGPGYLGSGGSRNSSSLDHPDE 144
Query: 175 PTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGP 234
L + ++G+ YL E +++++RD N+L+ K K+SDFGL+R+
Sbjct: 145 RALTMGDLISFAWQISQGMQYLAE---MKLVHRDLAARNILVAEGRKMKISDFGLSRDVY 201
Query: 235 TGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQ 294
D + + A E + +QSD+WSFGV+L+EI+T L N
Sbjct: 202 EEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT----LGGN------ 251
Query: 295 KLLEWVKQFPADG---KKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQV 351
P G ++ ++ R + N + + +L C K+ P++RP +
Sbjct: 252 ---------PYPGIPPERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADI 302
Query: 352 VESLK 356
+ L+
Sbjct: 303 SKDLE 307
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 105/209 (50%), Gaps = 13/209 (6%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNH-GLQGHKQWLAEVQFLGVVS 132
F ++ +G G FG+VYKG P +G + VA+K+L + +K+ L E + V
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIP-EGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 133 HPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEG 192
+P++ +LLG C T + I +L+ + + + E + +Q L W ++ A+G
Sbjct: 79 NPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 132
Query: 193 LAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLARE-GPTGDHTHVSTAVVGTYGY 251
+ YL + ++++RD NVL+ K++DFGLA+ G H V +
Sbjct: 133 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI-KW 188
Query: 252 AAPEYIETGHLKSQSDIWSFGVVLYEILT 280
A E I QSD+WS+GV ++E++T
Sbjct: 189 MALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 105/209 (50%), Gaps = 13/209 (6%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNH-GLQGHKQWLAEVQFLGVVS 132
F ++ +G G FG+VYKG P +G + VA+K+L + +K+ L E + V
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIP-EGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 133 HPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEG 192
+P++ +LLG C T + I +L+ + + + E + +Q L W ++ A+G
Sbjct: 78 NPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 131
Query: 193 LAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLARE-GPTGDHTHVSTAVVGTYGY 251
+ YL + ++++RD NVL+ K++DFGLA+ G H V +
Sbjct: 132 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI-KW 187
Query: 252 AAPEYIETGHLKSQSDIWSFGVVLYEILT 280
A E I QSD+WS+GV ++E++T
Sbjct: 188 MALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 105/209 (50%), Gaps = 13/209 (6%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNH-GLQGHKQWLAEVQFLGVVS 132
F ++ +G G FG+VYKG P +G + VA+K+L + +K+ L E + V
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIP-EGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 76
Query: 133 HPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEG 192
+P++ +LLG C T + I +L+ + + + E + +Q L W ++ A+G
Sbjct: 77 NPHVCRLLGICLTSTVQLIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQI------AKG 130
Query: 193 LAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLARE-GPTGDHTHVSTAVVGTYGY 251
+ YL + ++++RD NVL+ K++DFGLA+ G H V +
Sbjct: 131 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI-KW 186
Query: 252 AAPEYIETGHLKSQSDIWSFGVVLYEILT 280
A E I QSD+WS+GV ++E++T
Sbjct: 187 MALESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 127/282 (45%), Gaps = 37/282 (13%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLN-NHGLQGHKQWLAEVQFLGVVS 132
F ++ KIG+G FG V+KG +D R + VVA+K ++ + E+ L
Sbjct: 29 FTKLEKIGKGSFGEVFKG----IDNRTQK-VVAIKIIDLEEAEDEIEDIQQEITVLSQCD 83
Query: 133 HPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIIL-GAAE 191
P + K G + + I + EY+ S D L +P +T++ IL +
Sbjct: 84 SPYVTKYYGSYLKDTKLWI----IMEYLGGGSALDLL----EPGPLDETQIATILREILK 135
Query: 192 GLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGY 251
GL YLH + I+RD K +NVLL + + KL+DFG+A G D VGT +
Sbjct: 136 GLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKRNTFVGTPFW 190
Query: 252 AAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKFS 311
APE I+ S++DIWS G+ E+ G P E ++ + P +
Sbjct: 191 MAPEVIKQSAYDSKADIWSLGITAIELARGE------PPHSELHPMKVLFLIPKNNP--- 241
Query: 312 MMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVE 353
P L YS + + + + CL K P RPT ++++
Sbjct: 242 ----PTLEGNYS----KPLKEFVEACLNKEPSFRPTAKELLK 275
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 105/209 (50%), Gaps = 13/209 (6%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNH-GLQGHKQWLAEVQFLGVVS 132
F ++ +G G FG+VYKG P +G + VA+K+L + +K+ L E + V
Sbjct: 11 FKKIKVLGSGAFGTVYKGLWIP-EGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 69
Query: 133 HPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEG 192
+P++ +LLG C T + I +L+ + + + E + +Q L W ++ A+G
Sbjct: 70 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 123
Query: 193 LAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLARE-GPTGDHTHVSTAVVGTYGY 251
+ YL + ++++RD NVL+ K++DFGLA+ G H V +
Sbjct: 124 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI-KW 179
Query: 252 AAPEYIETGHLKSQSDIWSFGVVLYEILT 280
A E I QSD+WS+GV ++E++T
Sbjct: 180 MALESILHRIYTHQSDVWSYGVTVWELMT 208
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 105/209 (50%), Gaps = 13/209 (6%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNH-GLQGHKQWLAEVQFLGVVS 132
F ++ +G G FG+VYKG P +G + VA+K+L + +K+ L E + V
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIP-EGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 133 HPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEG 192
+P++ +LLG C T + I +L+ + + + E + +Q L W ++ A+G
Sbjct: 76 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 129
Query: 193 LAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLARE-GPTGDHTHVSTAVVGTYGY 251
+ YL + ++++RD NVL+ K++DFGLA+ G H V +
Sbjct: 130 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI-KW 185
Query: 252 AAPEYIETGHLKSQSDIWSFGVVLYEILT 280
A E I QSD+WS+GV ++E++T
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 124/294 (42%), Gaps = 41/294 (13%)
Query: 80 IGEGGFGSVYKGTIRPLDGRG--EPLVVAVKKLNNHGLQGH-KQWLAEVQFLGVVS-HPN 135
+GEG FG V +D E + VAVK L + + ++E++ + ++ H N
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 91
Query: 136 LVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPW--------------KT 181
++ LLG C+ + + + EY +L + L +R P + + K
Sbjct: 92 IINLLGACTQDGPLYV----IVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 147
Query: 182 RLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHV 241
+ A G+ YL + I+RD NVL+ N K++DFGLAR+ D+
Sbjct: 148 LVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 204
Query: 242 STAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVK 301
+T + APE + QSD+WSFGV+++EI T P ++L + +K
Sbjct: 205 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV--EELFKLLK 262
Query: 302 QFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESL 355
+ R N + + +C P +RPT Q+VE L
Sbjct: 263 E--------------GHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 302
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 105/209 (50%), Gaps = 13/209 (6%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNH-GLQGHKQWLAEVQFLGVVS 132
F ++ +G G FG+VYKG P +G + VA+K+L + +K+ L E + V
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIP-EGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 79
Query: 133 HPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEG 192
+P++ +LLG C T + I +L+ + + + E + +Q L W ++ A+G
Sbjct: 80 NPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 133
Query: 193 LAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLARE-GPTGDHTHVSTAVVGTYGY 251
+ YL + ++++RD NVL+ K++DFGLA+ G H V +
Sbjct: 134 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI-KW 189
Query: 252 AAPEYIETGHLKSQSDIWSFGVVLYEILT 280
A E I QSD+WS+GV ++E++T
Sbjct: 190 MALESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 105/209 (50%), Gaps = 13/209 (6%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNH-GLQGHKQWLAEVQFLGVVS 132
F ++ +G G FG+VYKG P +G + VA+K+L + +K+ L E + V
Sbjct: 23 FKKIKVLGSGAFGTVYKGLWIP-EGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 81
Query: 133 HPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEG 192
+P++ +LLG C T + I +L+ + + + E + +Q L W ++ A+G
Sbjct: 82 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 135
Query: 193 LAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLARE-GPTGDHTHVSTAVVGTYGY 251
+ YL + ++++RD NVL+ K++DFGLA+ G H V +
Sbjct: 136 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI-KW 191
Query: 252 AAPEYIETGHLKSQSDIWSFGVVLYEILT 280
A E I QSD+WS+GV ++E++T
Sbjct: 192 MALESILHRIYTHQSDVWSYGVTVWELMT 220
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 128/305 (41%), Gaps = 56/305 (18%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLN-NHGLQGHKQWLAEVQFLGVVSHPNLVK 138
+GEG FG V K T L GR VAVK L N + L+E L V+HP+++K
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRA------------------------Q 174
L G CS + LL+ EY SL R F R +
Sbjct: 91 LYGACSQDGPL----LLIVEYAKYGSL--RGFLRESRKVGPGYLGSGGSRNSSSLDHPDE 144
Query: 175 PTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGP 234
L + ++G+ YL E +++++RD N+L+ K K+SDFGL+R+
Sbjct: 145 RALTMGDLISFAWQISQGMQYLAE---MKLVHRDLAARNILVAEGRKMKISDFGLSRDVY 201
Query: 235 TGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQ 294
D + + A E + +QSD+WSFGV+L+EI+T L N
Sbjct: 202 EEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT----LGGN------ 251
Query: 295 KLLEWVKQFPADG---KKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQV 351
P G ++ ++ R + N + + +L C K+ P++RP +
Sbjct: 252 ---------PYPGIPPERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADI 302
Query: 352 VESLK 356
+ L+
Sbjct: 303 SKDLE 307
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 105/209 (50%), Gaps = 13/209 (6%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNH-GLQGHKQWLAEVQFLGVVS 132
F ++ +G G FG+VYKG P +G + VA+K+L + +K+ L E + V
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIP-EGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 133 HPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEG 192
+P++ +LLG C T + I +L+ + + + E + +Q L W ++ A+G
Sbjct: 79 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 132
Query: 193 LAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLARE-GPTGDHTHVSTAVVGTYGY 251
+ YL + ++++RD NVL+ K++DFGLA+ G H V +
Sbjct: 133 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI-KW 188
Query: 252 AAPEYIETGHLKSQSDIWSFGVVLYEILT 280
A E I QSD+WS+GV ++E++T
Sbjct: 189 MALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 123/294 (41%), Gaps = 41/294 (13%)
Query: 80 IGEGGFGSVYKGTIRPLDGRG--EPLVVAVKKLNNHGLQGH-KQWLAEVQFLGVVS-HPN 135
+GEG FG V +D E + VAVK L + + ++E++ + ++ H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 136 LVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQP--------------TLPWKT 181
++ LLG C+ + + + EY +L + L +R P + +K
Sbjct: 103 IINLLGACTQDGPLYV----IVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKD 158
Query: 182 RLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHV 241
+ A G+ YL + I+RD NVL+ N K++DFGLAR+ D
Sbjct: 159 LVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKK 215
Query: 242 STAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVK 301
+T + APE + QSD+WSFGV+++EI T P ++L + +K
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV--EELFKLLK 273
Query: 302 QFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESL 355
+ R N + + +C P +RPT Q+VE L
Sbjct: 274 E--------------GHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 313
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 124/294 (42%), Gaps = 41/294 (13%)
Query: 80 IGEGGFGSVYKGTIRPLDGRG--EPLVVAVKKLNNHGLQGH-KQWLAEVQFLGVVS-HPN 135
+GEG FG V +D E + VAVK L + + ++E++ + ++ H N
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 94
Query: 136 LVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPW--------------KT 181
++ LLG C+ + + + EY +L + L +R P + + K
Sbjct: 95 IINLLGACTQDGPLYV----IVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 150
Query: 182 RLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHV 241
+ A G+ YL + I+RD NVL+ N K++DFGLAR+ D+
Sbjct: 151 LVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 207
Query: 242 STAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVK 301
+T + APE + QSD+WSFGV+++EI T P ++L + +K
Sbjct: 208 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV--EELFKLLK 265
Query: 302 QFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESL 355
+ R N + + +C P +RPT Q+VE L
Sbjct: 266 E--------------GHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 305
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 117/282 (41%), Gaps = 49/282 (17%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQG---HKQWLAEVQFLGVVSHPNL 136
+G+G FG+VY + ++A+K L L+ Q EV+ + HPN+
Sbjct: 21 LGKGKFGNVYLAR-----EKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNI 75
Query: 137 VKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRA----QPTLPWKTRLEIILGAAEG 192
++L GY + L+ EY P + L + Q T + T L A
Sbjct: 76 LRLYGYFHD----ATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITEL------ANA 125
Query: 193 LAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYA 252
L+Y H +VI+RD K N+LL + K++DFG + P+ + GT Y
Sbjct: 126 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRX----XLXGTLDYL 178
Query: 253 APEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVK-QFPADGKKFS 311
PE IE + D+WS GV+ YE L G+ E N K + V+ FP
Sbjct: 179 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP------- 231
Query: 312 MMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVE 353
+ AR L LK NP +RP + +V+E
Sbjct: 232 ---------DFVTEGAR---DLISRLLKHNPSQRPMLREVLE 261
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 124/294 (42%), Gaps = 41/294 (13%)
Query: 80 IGEGGFGSVYKGTIRPLDGRG--EPLVVAVKKLNNHGLQGH-KQWLAEVQFLGVVS-HPN 135
+GEG FG V +D E + VAVK L + + ++E++ + ++ H N
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 89
Query: 136 LVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQP--------------TLPWKT 181
++ LLG C+ + + + EY +L + L +R P + +K
Sbjct: 90 IINLLGACTQDGPLYV----IVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 145
Query: 182 RLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHV 241
+ A G+ YL + I+RD NVL+ N K++DFGLAR+ D+
Sbjct: 146 LVSCTYQLARGMEYLASQ---KCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKK 202
Query: 242 STAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVK 301
+T + APE + QSD+WSFGV+++EI T P ++L + +K
Sbjct: 203 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV--EELFKLLK 260
Query: 302 QFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESL 355
+ R N + + +C P +RPT Q+VE L
Sbjct: 261 E--------------GHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 300
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 105/209 (50%), Gaps = 13/209 (6%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNH-GLQGHKQWLAEVQFLGVVS 132
F ++ +G G FG+VYKG P +G + VA+K+L + +K+ L E + V
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIP-EGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 133 HPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEG 192
+P++ +LLG C T + I +L+ + + + E + +Q L W ++ A+G
Sbjct: 76 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 129
Query: 193 LAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLARE-GPTGDHTHVSTAVVGTYGY 251
+ YL + ++++RD NVL+ K++DFGLA+ G H V +
Sbjct: 130 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI-KW 185
Query: 252 AAPEYIETGHLKSQSDIWSFGVVLYEILT 280
A E I QSD+WS+GV ++E++T
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 105/209 (50%), Gaps = 13/209 (6%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNH-GLQGHKQWLAEVQFLGVVS 132
F ++ +G G FG+VYKG P +G + VA+K+L + +K+ L E + V
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIP-EGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 133 HPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEG 192
+P++ +LLG C T + I +L+ + + + E + +Q L W ++ A+G
Sbjct: 76 NPHVCRLLGICLTSTVQLITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQI------AKG 129
Query: 193 LAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLARE-GPTGDHTHVSTAVVGTYGY 251
+ YL + ++++RD NVL+ K++DFGLA+ G H V +
Sbjct: 130 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI-KW 185
Query: 252 AAPEYIETGHLKSQSDIWSFGVVLYEILT 280
A E I QSD+WS+GV ++E++T
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 105/209 (50%), Gaps = 13/209 (6%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNH-GLQGHKQWLAEVQFLGVVS 132
F ++ +G G FG+VYKG P +G + VA+K+L + +K+ L E + V
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIP-EGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 133 HPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEG 192
+P++ +LLG C T + I +L+ + + + E + +Q L W ++ A+G
Sbjct: 79 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 132
Query: 193 LAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLARE-GPTGDHTHVSTAVVGTYGY 251
+ YL + ++++RD NVL+ K++DFGLA+ G H V +
Sbjct: 133 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI-KW 188
Query: 252 AAPEYIETGHLKSQSDIWSFGVVLYEILT 280
A E I QSD+WS+GV ++E++T
Sbjct: 189 MALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 105/209 (50%), Gaps = 13/209 (6%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNH-GLQGHKQWLAEVQFLGVVS 132
F ++ +G G FG+VYKG P +G + VA+K+L + +K+ L E + V
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIP-EGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 133 HPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEG 192
+P++ +LLG C T + I +L+ + + + E + +Q L W ++ A+G
Sbjct: 79 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 132
Query: 193 LAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLARE-GPTGDHTHVSTAVVGTYGY 251
+ YL + ++++RD NVL+ K++DFGLA+ G H V +
Sbjct: 133 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI-KW 188
Query: 252 AAPEYIETGHLKSQSDIWSFGVVLYEILT 280
A E I QSD+WS+GV ++E++T
Sbjct: 189 MALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 123/294 (41%), Gaps = 41/294 (13%)
Query: 80 IGEGGFGSVYKGTIRPLDGRG--EPLVVAVKKLNNHGLQGH-KQWLAEVQFLGVVS-HPN 135
+GEG FG V +D E + VAVK L + + ++E++ + ++ H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 136 LVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPW--------------KT 181
++ LLG C+ + + + EY +L + L +R P + + K
Sbjct: 103 IINLLGACTQDGPLYV----IVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 182 RLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHV 241
+ A G+ YL + I+RD NVL+ N K++DFGLAR+ D
Sbjct: 159 LVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKK 215
Query: 242 STAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVK 301
+T + APE + QSD+WSFGV+++EI T P ++L + +K
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV--EELFKLLK 273
Query: 302 QFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESL 355
+ R N + + +C P +RPT Q+VE L
Sbjct: 274 E--------------GHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 313
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 127/305 (41%), Gaps = 56/305 (18%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLN-NHGLQGHKQWLAEVQFLGVVSHPNLVK 138
+GEG FG V K T L GR VAVK L N + L+E L V+HP+++K
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRA------------------------Q 174
L G CS + LL+ EY SL R F R +
Sbjct: 91 LYGACSQDGPL----LLIVEYAKYGSL--RGFLRESRKVGPGYLGSGGSRNSSSLDHPDE 144
Query: 175 PTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGP 234
L + ++G+ YL E + +++RD N+L+ K K+SDFGL+R+
Sbjct: 145 RALTMGDLISFAWQISQGMQYLAE---MSLVHRDLAARNILVAEGRKMKISDFGLSRDVY 201
Query: 235 TGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQ 294
D + + A E + +QSD+WSFGV+L+EI+T L N
Sbjct: 202 EEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT----LGGN------ 251
Query: 295 KLLEWVKQFPADG---KKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQV 351
P G ++ ++ R + N + + +L C K+ P++RP +
Sbjct: 252 ---------PYPGIPPERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADI 302
Query: 352 VESLK 356
+ L+
Sbjct: 303 SKDLE 307
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 105/209 (50%), Gaps = 13/209 (6%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNH-GLQGHKQWLAEVQFLGVVS 132
F ++ +G G FG+VYKG P +G + VA+K+L + +K+ L E + V
Sbjct: 24 FKKIKVLGSGAFGTVYKGLWIP-EGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 133 HPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEG 192
+P++ +LLG C T + I +L+ + + + E + +Q L W ++ A+G
Sbjct: 83 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 136
Query: 193 LAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLARE-GPTGDHTHVSTAVVGTYGY 251
+ YL + ++++RD NVL+ K++DFGLA+ G H V +
Sbjct: 137 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV-PIKW 192
Query: 252 AAPEYIETGHLKSQSDIWSFGVVLYEILT 280
A E I QSD+WS+GV ++E++T
Sbjct: 193 MALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 117/282 (41%), Gaps = 49/282 (17%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQG---HKQWLAEVQFLGVVSHPNL 136
+G+G FG+VY + ++A+K L L+ Q EV+ + HPN+
Sbjct: 19 LGKGKFGNVYLAR-----EKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNI 73
Query: 137 VKLLGYCSTEDERGIQRLLVYEYMP----NRSLEDRLFSRAQPTLPWKTRLEIILGAAEG 192
++L GY + L+ EY P R L+ Q T + T L A
Sbjct: 74 LRLYGYFHD----ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANA 123
Query: 193 LAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYA 252
L+Y H +VI+RD K N+LL + K++DFG + P+ + GT Y
Sbjct: 124 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDL----CGTLDYL 176
Query: 253 APEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVK-QFPADGKKFS 311
PE IE + D+WS GV+ YE L G+ E N K + V+ FP
Sbjct: 177 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP------- 229
Query: 312 MMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVE 353
+ AR L LK NP +RP + +V+E
Sbjct: 230 ---------DFVTEGAR---DLISRLLKHNPSQRPMLREVLE 259
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 105/209 (50%), Gaps = 13/209 (6%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNH-GLQGHKQWLAEVQFLGVVS 132
F ++ +G G FG+VYKG P +G + VA+K+L + +K+ L E + V
Sbjct: 42 FKKIKVLGSGAFGTVYKGLWIP-EGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 100
Query: 133 HPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEG 192
+P++ +LLG C T + I +L+ + + + E + +Q L W ++ A+G
Sbjct: 101 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 154
Query: 193 LAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLARE-GPTGDHTHVSTAVVGTYGY 251
+ YL + ++++RD NVL+ K++DFGLA+ G H V +
Sbjct: 155 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI-KW 210
Query: 252 AAPEYIETGHLKSQSDIWSFGVVLYEILT 280
A E I QSD+WS+GV ++E++T
Sbjct: 211 MALESILHRIYTHQSDVWSYGVTVWELMT 239
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 109/214 (50%), Gaps = 23/214 (10%)
Query: 74 FNRMLKIGEGGFGSVY--KGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQ--FLG 129
F + +G+G FG V+ + RP G + A+K L L+ + +++ L
Sbjct: 30 FELLKVLGQGSFGKVFLVRKVTRPDSGH----LYAMKVLKKATLKVRDRVRTKMERDILA 85
Query: 130 VVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGA 189
V+HP +VKL TE + L+ +++ L RL ++ + + ++ L
Sbjct: 86 DVNHPFVVKLHYAFQTEG----KLYLILDFLRGGDLFTRL---SKEVMFTEEDVKFYLAE 138
Query: 190 -AEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGT 248
A GL +LH + +IYRD K N+LLD KL+DFGL++E DH + + GT
Sbjct: 139 LALGLDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKEAI--DHEKKAYSFCGT 193
Query: 249 YGYAAPEYIE-TGHLKSQSDIWSFGVVLYEILTG 281
Y APE + GH S +D WS+GV+++E+LTG
Sbjct: 194 VEYMAPEVVNRQGHSHS-ADWWSYGVLMFEMLTG 226
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 117/263 (44%), Gaps = 25/263 (9%)
Query: 21 PEPRNQNRLDNNSALNRTARSLPSPRSIPELYKEKEHHLRVFDMQELREATNGFNRMLKI 80
PEP D + SP S PE K+K+ L+ N +++
Sbjct: 294 PEPARITSPDKPRPMPMDTSVFESPFSDPEELKDKKLFLK---------RDNLLIADIEL 344
Query: 81 GEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGH-KQWLAEVQFLGVVSHPNLVKL 139
G G FGSV +G R R + + VA+K L + ++ + E Q + + +P +V+L
Sbjct: 345 GCGNFGSVRQGVYR---MRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRL 401
Query: 140 LGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEG 199
+G C E +LV E L L + + +P E++ + G+ YL E
Sbjct: 402 IGVCQAE-----ALMLVMEMAGGGPLHKFLVGKRE-EIPVSNVAELLHQVSMGMKYLEEK 455
Query: 200 LEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTY--GYAAPEYI 257
++R+ NVLL K+SDFGL++ D ++ + G + + APE I
Sbjct: 456 ---NFVHRNLAARNVLLVNRHYAKISDFGLSK-ALGADDSYYTARSAGKWPLKWYAPECI 511
Query: 258 ETGHLKSQSDIWSFGVVLYEILT 280
S+SD+WS+GV ++E L+
Sbjct: 512 NFRKFSSRSDVWSYGVTMWEALS 534
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 105/209 (50%), Gaps = 13/209 (6%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNH-GLQGHKQWLAEVQFLGVVS 132
F ++ +G G FG+VYKG P +G + VA+K+L + +K+ L E + V
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIP-EGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 133 HPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEG 192
+P++ +LLG C T + I +L+ + + + E + +Q L W ++ A+G
Sbjct: 78 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 131
Query: 193 LAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLARE-GPTGDHTHVSTAVVGTYGY 251
+ YL + ++++RD NVL+ K++DFGLA+ G H V +
Sbjct: 132 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI-KW 187
Query: 252 AAPEYIETGHLKSQSDIWSFGVVLYEILT 280
A E I QSD+WS+GV ++E++T
Sbjct: 188 MALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 90/307 (29%), Positives = 124/307 (40%), Gaps = 56/307 (18%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWL-AEVQFLGVVS-HPNLV 137
+G G FG V + T L L VAVK L + K+ L +E++ + + H N+V
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 138 KLLG-------------YCSTEDERGIQRL-----LVYEYMPNRSLEDRLFSRAQPTLPW 179
LLG YC D R L Y Y P+ + E++L SR
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSR------- 166
Query: 180 KTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHT 239
L A+G+A+L I+RD NVLL K+ DFGLAR+ +
Sbjct: 167 -DLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNY 222
Query: 240 HVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERN---RPTMEQKL 296
V + APE I QSD+WS+G++L+EI + L N + K
Sbjct: 223 IVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS----LGLNPYPGILVNSKF 278
Query: 297 LEWVKQFPADGKKFSMMIDPRL--RNQYSINAARRVAKLADNCLKKNPEERPTMNQVVES 354
+ VK DG + M P +N YSI A C P RPT Q+
Sbjct: 279 YKLVK----DGYQ---MAQPAFAPKNIYSIMQA---------CWALEPTHRPTFQQICSF 322
Query: 355 LKLAVQE 361
L+ QE
Sbjct: 323 LQEQAQE 329
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 124/294 (42%), Gaps = 41/294 (13%)
Query: 80 IGEGGFGSVYKGTIRPLDGRG--EPLVVAVKKLNNHGLQGH-KQWLAEVQFLGVVS-HPN 135
+GEG FG V +D E + VAVK L + + ++E++ + ++ H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 136 LVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPW--------------KT 181
++ LLG C+ + + + EY +L + L +R P + + K
Sbjct: 103 IINLLGACTQDGPLYV----IVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 182 RLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHV 241
+ A G+ YL + I+RD NVL+ N +++DFGLAR+ D+
Sbjct: 159 LVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKK 215
Query: 242 STAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVK 301
+T + APE + QSD+WSFGV+++EI T P ++L + +K
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV--EELFKLLK 273
Query: 302 QFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESL 355
+ R N + + +C P +RPT Q+VE L
Sbjct: 274 E--------------GHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 313
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 124/301 (41%), Gaps = 40/301 (13%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLN-NHGLQGHKQWLAEVQFLGVV-SHPNLV 137
+G G FG V + T L + VAVK L + L + ++E++ L + +H N+V
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 113
Query: 138 KLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILG--------- 188
LLG C+ G L++ EY L + L + + KT I+
Sbjct: 114 NLLGACTI----GGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLED 169
Query: 189 -------AAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHV 241
A+G+A+L I+RD N+LL K+ DFGLAR + V
Sbjct: 170 LLSFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVV 226
Query: 242 STAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVK 301
+ APE I +SD+WS+G+ L+E+ + + P M
Sbjct: 227 KGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS---LGSSPYPGM--------- 274
Query: 302 QFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQE 361
P D KF MI R +A + + C +P +RPT Q+V+ ++ + E
Sbjct: 275 --PVDS-KFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISE 331
Query: 362 S 362
S
Sbjct: 332 S 332
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 132/294 (44%), Gaps = 40/294 (13%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLN-NHGLQGHKQWLAEVQFLGVVS 132
F ++ +IG+G FG V+KG +D R + VVA+K ++ + E+ L
Sbjct: 25 FTKLERIGKGSFGEVFKG----IDNRTQQ-VVAIKIIDLEEAEDEIEDIQQEITVLSQCD 79
Query: 133 HPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWK--TRLEIILGAA 190
+ K G +G + ++ EY+ S D L RA P ++ T L+ IL
Sbjct: 80 SSYVTKYYGSYL----KGSKLWIIMEYLGGGSALDLL--RAGPFDEFQIATMLKEIL--- 130
Query: 191 EGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYG 250
+GL YLH + I+RD K +NVLL KL+DFG+A G D VGT
Sbjct: 131 KGLDYLHSE---KKIHRDIKAANVLLSEQGDVKLADFGVA--GQLTDTQIKRNTFVGTPF 185
Query: 251 YAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKF 310
+ APE I+ S++DIWS G+ E+ G P + + + P +
Sbjct: 186 WMAPEVIQQSAYDSKADIWSLGITAIELAKGE------PPNSDMHPMRVLFLIPKNNP-- 237
Query: 311 SMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQESEQ 364
P L ++ + + D CL K+P RPT ++++ K V+ S++
Sbjct: 238 -----PTLVGDFT----KSFKEFIDACLNKDPSFRPTAKELLKH-KFIVKNSKK 281
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 99/213 (46%), Gaps = 27/213 (12%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKL 139
+G+G FG K T R GE V+ +K+L + + +L EV+ + + HPN++K
Sbjct: 18 LGKGCFGQAIKVTHRET---GE--VMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKF 72
Query: 140 LGYCSTEDERGIQRL-LVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHE 198
+G + +RL + EY+ +L + PW R+ A G+AYLH
Sbjct: 73 IGVLYKD-----KRLNFITEYIKGGTLRG-IIKSMDSQYPWSQRVSFAKDIASGMAYLHS 126
Query: 199 GLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAR------EGPTGDHT------HVSTAVV 246
+ +I+RD + N L+ N ++DFGLAR P G + VV
Sbjct: 127 ---MNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVV 183
Query: 247 GTYGYAAPEYIETGHLKSQSDIWSFGVVLYEIL 279
G + APE I + D++SFG+VL EI+
Sbjct: 184 GNPYWMAPEMINGRSYDEKVDVFSFGIVLCEII 216
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 98/208 (47%), Gaps = 15/208 (7%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLN-NHGLQGHKQWLAEVQFLGVVS 132
NR+L GEG FG VY+G + +GE + VAVK + L +++++E + +
Sbjct: 12 LNRIL--GEGFFGEVYEGVYT--NHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLD 67
Query: 133 HPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEG 192
HP++VKL+G E I L Y + + R + +L T + L +
Sbjct: 68 HPHIVKLIGIIEEEPTWIIMELYPYGELGH------YLERNKNSLKVLTLVLYSLQICKA 121
Query: 193 LAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYA 252
+AYL I ++RD N+L+ KL DFGL+R D+ S + +
Sbjct: 122 MAYLES---INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPI-KWM 177
Query: 253 APEYIETGHLKSQSDIWSFGVVLYEILT 280
+PE I + SD+W F V ++EIL+
Sbjct: 178 SPESINFRRFTTASDVWMFAVCMWEILS 205
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 94/209 (44%), Gaps = 29/209 (13%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQG---HKQWLAEVQFLGVVSHPNL 136
+G+G FG+VY R ++A+K L L+ Q EV+ + HPN+
Sbjct: 20 LGKGKFGNVYLAR-----ERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNI 74
Query: 137 VKLLGYCSTEDERGIQRLLVYEYMP----NRSLEDRLFSRAQPTLPWKTRLEIILGAAEG 192
++L GY + L+ EY P R L+ Q T + T L A
Sbjct: 75 LRLYGYFHD----ATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITEL------ANA 124
Query: 193 LAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYA 252
L+Y H +VI+RD K N+LL N + K++DFG + P+ T + GT Y
Sbjct: 125 LSYCHSK---RVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSR----RTTLCGTLDYL 177
Query: 253 APEYIETGHLKSQSDIWSFGVVLYEILTG 281
PE IE + D+WS GV+ YE L G
Sbjct: 178 PPEMIEGRMHDEKVDLWSLGVLCYEFLVG 206
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 97/208 (46%), Gaps = 15/208 (7%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLN-NHGLQGHKQWLAEVQFLGVVS 132
NR+L GEG FG VY+G + +GE + VAVK + L +++++E + +
Sbjct: 28 LNRIL--GEGFFGEVYEGVYT--NHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLD 83
Query: 133 HPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEG 192
HP++VKL+G E I L Y + R + +L T + L +
Sbjct: 84 HPHIVKLIGIIEEEPTWIIMELYPYGEL------GHYLERNKNSLKVLTLVLYSLQICKA 137
Query: 193 LAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYA 252
+AYL I ++RD N+L+ KL DFGL+R D+ S + +
Sbjct: 138 MAYLES---INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPI-KWM 193
Query: 253 APEYIETGHLKSQSDIWSFGVVLYEILT 280
+PE I + SD+W F V ++EIL+
Sbjct: 194 SPESINFRRFTTASDVWMFAVCMWEILS 221
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 104/209 (49%), Gaps = 13/209 (6%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNH-GLQGHKQWLAEVQFLGVVS 132
F ++ +G G FG+VYKG P +G + VA+ +L + +K+ L E + V
Sbjct: 51 FKKIKVLGSGAFGTVYKGLWIP-EGEKVKIPVAIMELREATSPKANKEILDEAYVMASVD 109
Query: 133 HPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEG 192
+P++ +LLG C T + I +L+ + + + E + +Q L W ++ A+G
Sbjct: 110 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 163
Query: 193 LAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLARE-GPTGDHTHVSTAVVGTYGY 251
+ YL + ++++RD NVL+ K++DFGLA+ G H V +
Sbjct: 164 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI-KW 219
Query: 252 AAPEYIETGHLKSQSDIWSFGVVLYEILT 280
A E I QSD+WS+GV ++E++T
Sbjct: 220 MALESILHRIYTHQSDVWSYGVTVWELMT 248
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 123/294 (41%), Gaps = 41/294 (13%)
Query: 80 IGEGGFGSVYKGTIRPLDGRG--EPLVVAVKKLNNHGLQGH-KQWLAEVQFLGVVS-HPN 135
+GEG FG V +D E + VAVK L + + ++E++ + ++ H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 136 LVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPW--------------KT 181
++ LLG C+ + + + Y +L + L +R P + + K
Sbjct: 103 IINLLGACTQDGPLYV----IVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 182 RLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHV 241
+ A G+ YL + I+RD NVL+ N K++DFGLAR+ D+
Sbjct: 159 LVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 215
Query: 242 STAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVK 301
+T + APE + QSD+WSFGV+++EI T P ++L + +K
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV--EELFKLLK 273
Query: 302 QFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESL 355
+ R N + + +C P +RPT Q+VE L
Sbjct: 274 E--------------GHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 313
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 100/206 (48%), Gaps = 16/206 (7%)
Query: 78 LKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGH-KQWLAEVQFLGVVSHPNL 136
+++G G FGSV +G R R + + VA+K L + ++ + E Q + + +P +
Sbjct: 16 IELGCGNFGSVRQGVYRM---RKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYI 72
Query: 137 VKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYL 196
V+L+G C E +LV E L L + + +P E++ + G+ YL
Sbjct: 73 VRLIGVCQAE-----ALMLVMEMAGGGPLHKFLVGKRE-EIPVSNVAELLHQVSMGMKYL 126
Query: 197 HEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTY--GYAAP 254
E ++RD NVLL K+SDFGL++ D ++ + G + + AP
Sbjct: 127 EEK---NFVHRDLAARNVLLVNRHYAKISDFGLSK-ALGADDSYYTARSAGKWPLKWYAP 182
Query: 255 EYIETGHLKSQSDIWSFGVVLYEILT 280
E I S+SD+WS+GV ++E L+
Sbjct: 183 ECINFRKFSSRSDVWSYGVTMWEALS 208
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 99/208 (47%), Gaps = 15/208 (7%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLN-NHGLQGHKQWLAEVQFLGVVS 132
NR+L GEG FG VY+G + +GE + VAVK + L +++++E + +
Sbjct: 16 LNRIL--GEGFFGEVYEGVYT--NHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLD 71
Query: 133 HPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEG 192
HP++VKL+G E ++ E P L L R + +L T + L +
Sbjct: 72 HPHIVKLIGIIEEE-----PTWIIMELYPYGELGHYL-ERNKNSLKVLTLVLYSLQICKA 125
Query: 193 LAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYA 252
+AYL I ++RD N+L+ KL DFGL+R D+ S + +
Sbjct: 126 MAYLES---INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPI-KWM 181
Query: 253 APEYIETGHLKSQSDIWSFGVVLYEILT 280
+PE I + SD+W F V ++EIL+
Sbjct: 182 SPESINFRRFTTASDVWMFAVCMWEILS 209
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 88/340 (25%), Positives = 152/340 (44%), Gaps = 61/340 (17%)
Query: 50 ELYKEKEHHLRVFDMQ-----ELREATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLV 104
EL +++ L F Q EL++ + F ++ ++G G G V+K + +P +
Sbjct: 8 ELDEQQRKRLEAFLTQKQKVGELKD--DDFEKISELGAGNGGVVFKVSHKPSG------L 59
Query: 105 VAVKKLNNHGLQG--HKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPN 162
V +KL + ++ Q + E+Q L + P +V G ++ E I E+M
Sbjct: 60 VMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISI----CMEHMDG 115
Query: 163 RSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKP 222
SL D++ +A +P + ++ + +GL YL E + ++++RD K SN+L++ +
Sbjct: 116 GSL-DQVLKKAG-RIPEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEI 171
Query: 223 KLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGR 282
KL DFG++ G D ++ + VGT Y +PE ++ H QSDIWS G+ L E+ GR
Sbjct: 172 KLCDFGVS--GQLIDS--MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 227
Query: 283 RVLERNRPTMEQKLLEWVKQFPADG----------------KKFSMMIDPRLRN----QY 322
+ P + K LE + +G KF M P + Y
Sbjct: 228 YPI----PPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFGMDSRPPMAIFELLDY 283
Query: 323 SINA----------ARRVAKLADNCLKKNPEERPTMNQVV 352
+N + + CL KNP ER + Q++
Sbjct: 284 IVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLM 323
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 109/248 (43%), Gaps = 40/248 (16%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPL-VVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVK 138
IG+G F V K L GR + ++ +LN LQ + EV+ + +++HPN+VK
Sbjct: 23 IGKGNFAKV-KLARHVLTGREVAVKIIDKTQLNPTSLQ---KLFREVRIMKILNHPNIVK 78
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQ-PTLPWKTRLEIILGAAEGLAYLH 197
L TE LV EY + D L + + + + I+ A + Y H
Sbjct: 79 LFEVIETEK----TLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQ---YCH 131
Query: 198 EGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYI 257
+ +++RD K N+LLDG+ K++DFG + E G+ G+ YAAPE
Sbjct: 132 QKY---IVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKL---DTFCGSPPYAAPELF 185
Query: 258 ETGHLKS-QSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKFSMMIDP 316
+ + D+WS GV+LY +++G P DG+ + +
Sbjct: 186 QGKKYDGPEVDVWSLGVILYTLVSG--------------------SLPFDGQNLKELRER 225
Query: 317 RLRNQYSI 324
LR +Y I
Sbjct: 226 VLRGKYRI 233
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 123/295 (41%), Gaps = 43/295 (14%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLV--VAVKKLNNHGLQGH-KQWLAEVQFLGVVS-HPN 135
+GEG FG V LD V VAVK L + + ++E++ + ++ H N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 136 LVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPW--------------KT 181
++ LLG C+ + + + EY +L + L +R P L + K
Sbjct: 96 IINLLGACTQDGPLYV----IVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKD 151
Query: 182 RLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHV 241
+ A G+ YL + I+RD NVL+ + K++DFGLAR+ D+
Sbjct: 152 LVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 208
Query: 242 STAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQ-KLLEWV 300
+T + APE + QSD+WSFGV+L+EI T P E KLL
Sbjct: 209 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLL--- 265
Query: 301 KQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESL 355
K+ M P N + + +C P +RPT Q+VE L
Sbjct: 266 -------KEGHRMDKPS-------NCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 306
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 104/209 (49%), Gaps = 13/209 (6%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNH-GLQGHKQWLAEVQFLGVVS 132
F ++ + G FG+VYKG P +G + VA+K+L + +K+ L E + V
Sbjct: 17 FKKIKVLSSGAFGTVYKGLWIP-EGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 133 HPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEG 192
+P++ +LLG C T + I +L+ + + + E + +Q L W ++ A+G
Sbjct: 76 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 129
Query: 193 LAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLARE-GPTGDHTHVSTAVVGTYGY 251
+ YL + ++++RD NVL+ K++DFGLA+ G H V +
Sbjct: 130 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI-KW 185
Query: 252 AAPEYIETGHLKSQSDIWSFGVVLYEILT 280
A E I QSD+WS+GV ++E++T
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 104/209 (49%), Gaps = 13/209 (6%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNH-GLQGHKQWLAEVQFLGVVS 132
F ++ + G FG+VYKG P +G + VA+K+L + +K+ L E + V
Sbjct: 24 FKKIKVLSSGAFGTVYKGLWIP-EGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 133 HPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEG 192
+P++ +LLG C T + I +L+ + + + E + +Q L W ++ A+G
Sbjct: 83 NPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 136
Query: 193 LAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLARE-GPTGDHTHVSTAVVGTYGY 251
+ YL + ++++RD NVL+ K++DFGLA+ G H V +
Sbjct: 137 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI-KW 192
Query: 252 AAPEYIETGHLKSQSDIWSFGVVLYEILT 280
A E I QSD+WS+GV ++E++T
Sbjct: 193 MALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 123/295 (41%), Gaps = 43/295 (14%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLV--VAVKKLNNHGLQGH-KQWLAEVQFLGVVS-HPN 135
+GEG FG V LD V VAVK L + + ++E++ + ++ H N
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 136 LVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPW--------------KT 181
++ LLG C+ + + + EY +L + L +R P L + K
Sbjct: 81 IINLLGACTQDGPLYV----IVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKD 136
Query: 182 RLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHV 241
+ A G+ YL + I+RD NVL+ + K++DFGLAR+ D+
Sbjct: 137 LVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 193
Query: 242 STAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQ-KLLEWV 300
+T + APE + QSD+WSFGV+L+EI T P E KLL
Sbjct: 194 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLL--- 250
Query: 301 KQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESL 355
K+ M P N + + +C P +RPT Q+VE L
Sbjct: 251 -------KEGHRMDKPS-------NCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 291
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 123/294 (41%), Gaps = 41/294 (13%)
Query: 80 IGEGGFGSVYKGTIRPLDGRG--EPLVVAVKKLNNHGLQGH-KQWLAEVQFLGVVS-HPN 135
+GEG FG V +D E + VAVK L + + ++E++ + ++ H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 136 LVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPW--------------KT 181
++ LLG C+ + + + Y +L + L +R P + + K
Sbjct: 103 IINLLGACTQDGPLYV----IVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 182 RLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHV 241
+ A G+ YL + I+RD NVL+ N K++DFGLAR+ D+
Sbjct: 159 LVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 215
Query: 242 STAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVK 301
+T + APE + QSD+WSFGV+++EI T P ++L + +K
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV--EELFKLLK 273
Query: 302 QFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESL 355
+ R N + + +C P +RPT Q+VE L
Sbjct: 274 E--------------GHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 313
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 85/281 (30%), Positives = 127/281 (45%), Gaps = 45/281 (16%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHK---QWLAEVQFLGVVSHPNL 136
+G G FG V G L G VAVK LN ++ + E+Q L + HP++
Sbjct: 19 LGVGTFGKVKIGE-HQLTGHK----VAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHI 73
Query: 137 VKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRL-EIILGAAEGLAY 195
+KL ST + +V EY+ L D + + RL + IL A + Y
Sbjct: 74 IKLYQVISTPTDF----FMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVD---Y 126
Query: 196 LHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPE 255
H + V++RD K NVLLD + K++DFGL+ G+ S G+ YAAPE
Sbjct: 127 CHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSC---GSPNYAAPE 180
Query: 256 YIETGHLKS--QSDIWSFGVVLYEILTGRRVL-ERNRPTMEQKLLEWVKQFPADGKKFSM 312
I +G L + + DIWS GV+LY +L G + + PT+ +K+ V P
Sbjct: 181 VI-SGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIP-------- 231
Query: 313 MIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVE 353
+Y R VA L + L+ +P +R T+ + E
Sbjct: 232 --------EY---LNRSVATLLMHMLQVDPLKRATIKDIRE 261
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 123/295 (41%), Gaps = 43/295 (14%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLV--VAVKKLNNHGLQGH-KQWLAEVQFLGVVS-HPN 135
+GEG FG V LD V VAVK L + + ++E++ + ++ H N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 136 LVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPW--------------KT 181
++ LLG C+ + + + EY +L + L +R P L + K
Sbjct: 96 IINLLGACTQDGPLYV----IVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 151
Query: 182 RLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHV 241
+ A G+ YL + I+RD NVL+ + K++DFGLAR+ D+
Sbjct: 152 LVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 208
Query: 242 STAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQ-KLLEWV 300
+T + APE + QSD+WSFGV+L+EI T P E KLL
Sbjct: 209 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLL--- 265
Query: 301 KQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESL 355
K+ M P N + + +C P +RPT Q+VE L
Sbjct: 266 -------KEGHRMDKPS-------NCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 306
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 123/295 (41%), Gaps = 43/295 (14%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLV--VAVKKLNNHGLQGH-KQWLAEVQFLGVVS-HPN 135
+GEG FG V LD V VAVK L + + ++E++ + ++ H N
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 88
Query: 136 LVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPW--------------KT 181
++ LLG C+ + + + EY +L + L +R P L + K
Sbjct: 89 IINLLGACTQDGPLYV----IVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 144
Query: 182 RLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHV 241
+ A G+ YL + I+RD NVL+ + K++DFGLAR+ D+
Sbjct: 145 LVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 201
Query: 242 STAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQ-KLLEWV 300
+T + APE + QSD+WSFGV+L+EI T P E KLL
Sbjct: 202 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLL--- 258
Query: 301 KQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESL 355
K+ M P N + + +C P +RPT Q+VE L
Sbjct: 259 -------KEGHRMDKPS-------NCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 299
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 123/295 (41%), Gaps = 43/295 (14%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLV--VAVKKLNNHGLQGH-KQWLAEVQFLGVVS-HPN 135
+GEG FG V LD V VAVK L + + ++E++ + ++ H N
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 136 LVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPW--------------KT 181
++ LLG C+ + + + EY +L + L +R P L + K
Sbjct: 85 IINLLGACTQDGPLYV----IVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 140
Query: 182 RLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHV 241
+ A G+ YL + I+RD NVL+ + K++DFGLAR+ D+
Sbjct: 141 LVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 197
Query: 242 STAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQ-KLLEWV 300
+T + APE + QSD+WSFGV+L+EI T P E KLL
Sbjct: 198 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLL--- 254
Query: 301 KQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESL 355
K+ M P N + + +C P +RPT Q+VE L
Sbjct: 255 -------KEGHRMDKPS-------NCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 295
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 104/209 (49%), Gaps = 13/209 (6%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNH-GLQGHKQWLAEVQFLGVVS 132
F ++ +G G FG+VYKG P +G + VA+K+L + +K+ L E + V
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIP-EGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 79
Query: 133 HPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEG 192
+P++ +LLG C T + I +L+ + + + E + +Q L W ++ A+G
Sbjct: 80 NPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 133
Query: 193 LAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLARE-GPTGDHTHVSTAVVGTYGY 251
+ YL + ++++RD NVL+ K++DFG A+ G H V +
Sbjct: 134 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPI-KW 189
Query: 252 AAPEYIETGHLKSQSDIWSFGVVLYEILT 280
A E I QSD+WS+GV ++E++T
Sbjct: 190 MALESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 123/295 (41%), Gaps = 43/295 (14%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLV--VAVKKLNNHGLQGH-KQWLAEVQFLGVVS-HPN 135
+GEG FG V LD V VAVK L + + ++E++ + ++ H N
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 136 LVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPW--------------KT 181
++ LLG C+ + + + EY +L + L +R P L + K
Sbjct: 88 IINLLGACTQDGPLYV----IVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 143
Query: 182 RLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHV 241
+ A G+ YL + I+RD NVL+ + K++DFGLAR+ D+
Sbjct: 144 LVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 200
Query: 242 STAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQ-KLLEWV 300
+T + APE + QSD+WSFGV+L+EI T P E KLL
Sbjct: 201 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLL--- 257
Query: 301 KQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESL 355
K+ M P N + + +C P +RPT Q+VE L
Sbjct: 258 -------KEGHRMDKPS-------NCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 298
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 110/213 (51%), Gaps = 20/213 (9%)
Query: 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQG--HKQWLAEVQFLG 129
+ F ++ ++G G G V+K + +P +V +KL + ++ Q + E+Q L
Sbjct: 68 DDFEKISELGAGNGGVVFKVSHKPSG------LVMARKLIHLEIKPAIRNQIIRELQVLH 121
Query: 130 VVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGA 189
+ P +V G ++ E I E+M SL D++ +A +P + ++ +
Sbjct: 122 ECNSPYIVGFYGAFYSDGEISI----CMEHMDGGSL-DQVLKKAG-RIPEQILGKVSIAV 175
Query: 190 AEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTY 249
+GL YL E + ++++RD K SN+L++ + KL DFG++ G D ++ + VGT
Sbjct: 176 IKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--MANSFVGTR 229
Query: 250 GYAAPEYIETGHLKSQSDIWSFGVVLYEILTGR 282
Y +PE ++ H QSDIWS G+ L E+ GR
Sbjct: 230 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 262
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 104/209 (49%), Gaps = 13/209 (6%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNH-GLQGHKQWLAEVQFLGVVS 132
F ++ + G FG+VYKG P +G + VA+K+L + +K+ L E + V
Sbjct: 24 FKKIKVLSSGAFGTVYKGLWIP-EGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 133 HPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEG 192
+P++ +LLG C T + I +L+ + + + E + +Q L W ++ A+G
Sbjct: 83 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 136
Query: 193 LAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLARE-GPTGDHTHVSTAVVGTYGY 251
+ YL + ++++RD NVL+ K++DFGLA+ G H V +
Sbjct: 137 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI-KW 192
Query: 252 AAPEYIETGHLKSQSDIWSFGVVLYEILT 280
A E I QSD+WS+GV ++E++T
Sbjct: 193 MALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 104/209 (49%), Gaps = 13/209 (6%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNH-GLQGHKQWLAEVQFLGVVS 132
F ++ +G G FG+VYKG P +G + VA+K+L + +K+ L E + V
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIP-EGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 133 HPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEG 192
+P++ +LLG C T + I +L+ + + + E + +Q L W ++ A+G
Sbjct: 78 NPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 131
Query: 193 LAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLARE-GPTGDHTHVSTAVVGTYGY 251
+ YL + ++++RD NVL+ K++DFG A+ G H V +
Sbjct: 132 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPI-KW 187
Query: 252 AAPEYIETGHLKSQSDIWSFGVVLYEILT 280
A E I QSD+WS+GV ++E++T
Sbjct: 188 MALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 123/295 (41%), Gaps = 43/295 (14%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLV--VAVKKLNNHGLQGH-KQWLAEVQFLGVVS-HPN 135
+GEG FG V LD V VAVK L + + ++E++ + ++ H N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 136 LVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPW--------------KT 181
++ LLG C+ + + + EY +L + L +R P L + K
Sbjct: 96 IINLLGACTQDGPLYV----IVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKD 151
Query: 182 RLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHV 241
+ A G+ YL + I+RD NVL+ + K++DFGLAR+ D+
Sbjct: 152 LVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 208
Query: 242 STAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQ-KLLEWV 300
+T + APE + QSD+WSFGV+L+EI T P E KLL
Sbjct: 209 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLL--- 265
Query: 301 KQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESL 355
K+ M P N + + +C P +RPT Q+VE L
Sbjct: 266 -------KEGHRMDKPS-------NCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 306
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 104/209 (49%), Gaps = 13/209 (6%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNH-GLQGHKQWLAEVQFLGVVS 132
F ++ +G G FG+VYKG P +G + VA+K+L + +K+ L E + V
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIP-EGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 133 HPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEG 192
+P++ +LLG C T + I +L+ + + + E + +Q L W ++ A+G
Sbjct: 78 NPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 131
Query: 193 LAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLARE-GPTGDHTHVSTAVVGTYGY 251
+ YL + ++++RD NVL+ K++DFG A+ G H V +
Sbjct: 132 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPI-KW 187
Query: 252 AAPEYIETGHLKSQSDIWSFGVVLYEILT 280
A E I QSD+WS+GV ++E++T
Sbjct: 188 MALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 104/209 (49%), Gaps = 13/209 (6%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNH-GLQGHKQWLAEVQFLGVVS 132
F ++ +G G FG+VYKG P +G + VA+K+L + +K+ L E + V
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIP-EGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 133 HPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEG 192
+P++ +LLG C T + I +L+ + + + E + +Q L W ++ A+G
Sbjct: 76 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 129
Query: 193 LAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLARE-GPTGDHTHVSTAVVGTYGY 251
+ YL + ++++RD NVL+ K++DFG A+ G H V +
Sbjct: 130 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPI-KW 185
Query: 252 AAPEYIETGHLKSQSDIWSFGVVLYEILT 280
A E I QSD+WS+GV ++E++T
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 104/209 (49%), Gaps = 13/209 (6%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNH-GLQGHKQWLAEVQFLGVVS 132
F ++ +G G FG+VYKG P +G + VA+K+L + +K+ L E + V
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIP-EGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 133 HPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEG 192
+P++ +LLG C T + I +L+ + + + E + +Q L W ++ A+G
Sbjct: 78 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 131
Query: 193 LAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLARE-GPTGDHTHVSTAVVGTYGY 251
+ YL + ++++RD NVL+ K++DFG A+ G H V +
Sbjct: 132 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPI-KW 187
Query: 252 AAPEYIETGHLKSQSDIWSFGVVLYEILT 280
A E I QSD+WS+GV ++E++T
Sbjct: 188 MALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 104/209 (49%), Gaps = 13/209 (6%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNH-GLQGHKQWLAEVQFLGVVS 132
F ++ +G G FG+VYKG P +G + VA+K+L + +K+ L E + V
Sbjct: 24 FKKIKVLGSGAFGTVYKGLWIP-EGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 133 HPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEG 192
+P++ +LLG C T + I +L+ + + + E + +Q L W ++ A+G
Sbjct: 83 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 136
Query: 193 LAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLARE-GPTGDHTHVSTAVVGTYGY 251
+ YL + ++++RD NVL+ K++DFG A+ G H V +
Sbjct: 137 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV-PIKW 192
Query: 252 AAPEYIETGHLKSQSDIWSFGVVLYEILT 280
A E I QSD+WS+GV ++E++T
Sbjct: 193 MALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 117/276 (42%), Gaps = 30/276 (10%)
Query: 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQ-GHKQWLAEVQFLGV 130
N F + +G+GGFG V +R G+ + + G L E Q L
Sbjct: 184 NTFRQYRVLGKGGFGEVCACQVR---ATGKMYACKKLEKKRIKKRKGEAMALNEKQILEK 240
Query: 131 VSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAA 190
V+ +V L T+D LV M L+ ++ Q P + AA
Sbjct: 241 VNSRFVVSLAYAYETKD----ALCLVLTLMNGGDLKFHIYHMGQAGFP---EARAVFYAA 293
Query: 191 EGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYG 250
E L + +++YRD K N+LLD + ++SD GLA P G VGT G
Sbjct: 294 EICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEG---QTIKGRVGTVG 350
Query: 251 YAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLE-WVKQFPADGKK 309
Y APE ++ D W+ G +LYE++ G+ ++ + ++++ +E VK+ P ++
Sbjct: 351 YMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVP---EE 407
Query: 310 FSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEER 345
+S P+ R+ L L K+P ER
Sbjct: 408 YSERFSPQARS------------LCSQLLCKDPAER 431
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 117/276 (42%), Gaps = 30/276 (10%)
Query: 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQ-GHKQWLAEVQFLGV 130
N F + +G+GGFG V +R G+ + + G L E Q L
Sbjct: 184 NTFRQYRVLGKGGFGEVCACQVR---ATGKMYACKKLEKKRIKKRKGEAMALNEKQILEK 240
Query: 131 VSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAA 190
V+ +V L T+D LV M L+ ++ Q P + AA
Sbjct: 241 VNSRFVVSLAYAYETKD----ALCLVLTLMNGGDLKFHIYHMGQAGFP---EARAVFYAA 293
Query: 191 EGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYG 250
E L + +++YRD K N+LLD + ++SD GLA P G VGT G
Sbjct: 294 EICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEG---QTIKGRVGTVG 350
Query: 251 YAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLE-WVKQFPADGKK 309
Y APE ++ D W+ G +LYE++ G+ ++ + ++++ +E VK+ P ++
Sbjct: 351 YMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVP---EE 407
Query: 310 FSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEER 345
+S P+ R+ L L K+P ER
Sbjct: 408 YSERFSPQARS------------LCSQLLCKDPAER 431
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 93/206 (45%), Gaps = 15/206 (7%)
Query: 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL---QGHKQWLAEVQFLGVVSHPN 135
K+G+G FG V +G G+ + VAVK L L + ++ EV + + H N
Sbjct: 15 KLGDGSFGVVRRGEWDAPSGKT--VSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 72
Query: 136 LVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAY 195
L++L G T + +V E P SL DRL + Q T + AEG+ Y
Sbjct: 73 LIRLYGVVLTPPMK-----MVTELAPLGSLLDRL-RKHQGHFLLGTLSRYAVQVAEGMGY 126
Query: 196 LHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGP-TGDHTHVSTAVVGTYGYAAP 254
L + I+RD N+LL K+ DFGL R P DH + + + AP
Sbjct: 127 LESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAP 183
Query: 255 EYIETGHLKSQSDIWSFGVVLYEILT 280
E ++T SD W FGV L+E+ T
Sbjct: 184 ESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 93/206 (45%), Gaps = 15/206 (7%)
Query: 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL---QGHKQWLAEVQFLGVVSHPN 135
K+G+G FG V +G G+ + VAVK L L + ++ EV + + H N
Sbjct: 19 KLGDGSFGVVRRGEWDAPSGK--TVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 76
Query: 136 LVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAY 195
L++L G T + +V E P SL DRL + Q T + AEG+ Y
Sbjct: 77 LIRLYGVVLTPPMK-----MVTELAPLGSLLDRL-RKHQGHFLLGTLSRYAVQVAEGMGY 130
Query: 196 LHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGT-YGYAAP 254
L + I+RD N+LL K+ DFGL R P D +V + + AP
Sbjct: 131 LESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAP 187
Query: 255 EYIETGHLKSQSDIWSFGVVLYEILT 280
E ++T SD W FGV L+E+ T
Sbjct: 188 ESLKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 93/206 (45%), Gaps = 15/206 (7%)
Query: 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL---QGHKQWLAEVQFLGVVSHPN 135
K+G+G FG V +G G+ + VAVK L L + ++ EV + + H N
Sbjct: 19 KLGDGSFGVVRRGEWDAPSGK--TVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 76
Query: 136 LVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAY 195
L++L G T + +V E P SL DRL + Q T + AEG+ Y
Sbjct: 77 LIRLYGVVLTPPMK-----MVTELAPLGSLLDRL-RKHQGHFLLGTLSRYAVQVAEGMGY 130
Query: 196 LHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGT-YGYAAP 254
L + I+RD N+LL K+ DFGL R P D +V + + AP
Sbjct: 131 LESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAP 187
Query: 255 EYIETGHLKSQSDIWSFGVVLYEILT 280
E ++T SD W FGV L+E+ T
Sbjct: 188 ESLKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 93/206 (45%), Gaps = 15/206 (7%)
Query: 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL---QGHKQWLAEVQFLGVVSHPN 135
K+G+G FG V +G G+ + VAVK L L + ++ EV + + H N
Sbjct: 25 KLGDGSFGVVRRGEWDAPSGK--TVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 82
Query: 136 LVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAY 195
L++L G T + +V E P SL DRL + Q T + AEG+ Y
Sbjct: 83 LIRLYGVVLTPPMK-----MVTELAPLGSLLDRL-RKHQGHFLLGTLSRYAVQVAEGMGY 136
Query: 196 LHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGP-TGDHTHVSTAVVGTYGYAAP 254
L + I+RD N+LL K+ DFGL R P DH + + + AP
Sbjct: 137 LESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAP 193
Query: 255 EYIETGHLKSQSDIWSFGVVLYEILT 280
E ++T SD W FGV L+E+ T
Sbjct: 194 ESLKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 141/305 (46%), Gaps = 50/305 (16%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVV--SHPNLV 137
+G+G +G V++G GE VAVK ++ Q W E + V H N++
Sbjct: 16 VGKGRYGEVWRGL-----WHGES--VAVKIFSSRDEQS---WFRETEIYNTVLLRHDNIL 65
Query: 138 KLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLH 197
+ T Q L+ Y + SL D L + TL L + + AA GLA+LH
Sbjct: 66 GFIASDMTSRNSSTQLWLITHYHEHGSLYDFL---QRQTLEPHLALRLAVSAACGLAHLH 122
Query: 198 EGLEI-------QVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTG-DHTHV-STAVVGT 248
+EI + +RDFK+ NVL+ N + ++D GLA G D+ + + VGT
Sbjct: 123 --VEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGT 180
Query: 249 YGYAAPEY----IETGHLKS--QSDIWSFGVVLYEILTGRR-----VLERNRPTMEQKLL 297
Y APE I T +S +DIW+FG+VL+EI RR ++E RP
Sbjct: 181 KRYMAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEI--ARRTIVNGIVEDYRP----PFY 234
Query: 298 EWVKQFPA--DGKKFSMMID---PRLRNQYSINAARR-VAKLADNCLKKNPEERPTMNQV 351
+ V P+ D KK + +D P + N+ + + +A++ C NP R T ++
Sbjct: 235 DVVPNDPSFEDMKKV-VCVDQQTPTIPNRLAADPVLSGLAQMMRECWYPNPSARLTALRI 293
Query: 352 VESLK 356
++L+
Sbjct: 294 KKTLQ 298
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 93/206 (45%), Gaps = 15/206 (7%)
Query: 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL---QGHKQWLAEVQFLGVVSHPN 135
K+G+G FG V +G G+ + VAVK L L + ++ EV + + H N
Sbjct: 15 KLGDGSFGVVRRGEWDAPSGK--TVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 72
Query: 136 LVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAY 195
L++L G T + +V E P SL DRL + Q T + AEG+ Y
Sbjct: 73 LIRLYGVVLTPPMK-----MVTELAPLGSLLDRL-RKHQGHFLLGTLSRYAVQVAEGMGY 126
Query: 196 LHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGT-YGYAAP 254
L + I+RD N+LL K+ DFGL R P D +V + + AP
Sbjct: 127 LESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAP 183
Query: 255 EYIETGHLKSQSDIWSFGVVLYEILT 280
E ++T SD W FGV L+E+ T
Sbjct: 184 ESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 105/207 (50%), Gaps = 22/207 (10%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKK-LNNHGLQGHKQWLAEVQFLGVVSHPNLVK 138
+GEG FG V K G+ L + KK L +QG + E+ +L ++ HP+++K
Sbjct: 22 LGEGSFGKV-KLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLRHPHIIK 78
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRL-EIILGAAEGLAYLH 197
L ++DE ++V EY N L D + R + + R + I+ A E Y H
Sbjct: 79 LYDVIKSKDEI----IMVIEYAGNE-LFDYIVQRDKMSEQEARRFFQQIISAVE---YCH 130
Query: 198 EGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYI 257
++++RD K N+LLD + K++DFGL+ G+ S G+ YAAPE I
Sbjct: 131 RH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GSPNYAAPEVI 184
Query: 258 ETGHLKS--QSDIWSFGVVLYEILTGR 282
+G L + + D+WS GV+LY +L R
Sbjct: 185 -SGKLYAGPEVDVWSCGVILYVMLCRR 210
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 125/301 (41%), Gaps = 38/301 (12%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQG-HKQWLAEVQFL-GVVSHPNLV 137
+G G FG V + +D VAVK L H+ ++E++ L + H N+V
Sbjct: 36 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 95
Query: 138 KLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEI---ILGAAEGLA 194
LLG C+ + G +++ E+ +L L S+ +P+KT ++ L +
Sbjct: 96 NLLGACT---KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLIC 152
Query: 195 Y---LHEGLEI----QVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVG 247
Y + +G+E + I+RD N+LL K+ DFGLAR+
Sbjct: 153 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL 212
Query: 248 TYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADG 307
+ APE I QSD+WSFGV+L+EI + + P G
Sbjct: 213 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-------------------LGASPYPG 253
Query: 308 KKFSMMIDPRLRNQYSINA----ARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQESE 363
K RL+ + A + + +C P +RPT +++VE L +Q +
Sbjct: 254 VKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 313
Query: 364 Q 364
Q
Sbjct: 314 Q 314
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 102/211 (48%), Gaps = 20/211 (9%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKL 139
IG G FG VY+ L GE +VA+KK+ LQG E+Q + + H N+V+L
Sbjct: 28 IGNGSFGVVYQAK---LCDSGE--LVAIKKV----LQGKAFKNRELQIMRKLDHCNIVRL 78
Query: 140 --LGYCSTEDERGIQRLLVYEYMPNRSLE-DRLFSRAQPTLPWKTRLEIILGAAEGLAYL 196
Y S E + + LV +Y+P R +SRA+ TLP + LAY+
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 197 HEGLEIQVIYRDFKTSNVLLDGNFKP-KLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPE 255
H + +RD K N+LLD + KL DFG A++ G+ + + + + Y APE
Sbjct: 139 HS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSYICSRYYRAPE 192
Query: 256 YI-ETGHLKSQSDIWSFGVVLYEILTGRRVL 285
I S D+WS G VL E+L G+ +
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 93/206 (45%), Gaps = 15/206 (7%)
Query: 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL---QGHKQWLAEVQFLGVVSHPN 135
K+G+G FG V +G G+ + VAVK L L + ++ EV + + H N
Sbjct: 15 KLGDGSFGVVRRGEWDAPSGKT--VSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 72
Query: 136 LVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAY 195
L++L G T + +V E P SL DRL + Q T + AEG+ Y
Sbjct: 73 LIRLYGVVLTPPMK-----MVTELAPLGSLLDRL-RKHQGHFLLGTLSRYAVQVAEGMGY 126
Query: 196 LHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGT-YGYAAP 254
L + I+RD N+LL K+ DFGL R P D +V + + AP
Sbjct: 127 LESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAP 183
Query: 255 EYIETGHLKSQSDIWSFGVVLYEILT 280
E ++T SD W FGV L+E+ T
Sbjct: 184 ESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 104/238 (43%), Gaps = 29/238 (12%)
Query: 74 FNRMLKIGEGGFGSVY------KGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQF 127
F + +G G FG V+ G + + +VV +K++ + E
Sbjct: 8 FQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTN--------DERLM 59
Query: 128 LGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIIL 187
L +V+HP ++++ G + +D + I ++ +Y+ L L R P
Sbjct: 60 LSIVTHPFIIRMWG--TFQDAQQI--FMIMDYIEGGELFSLL--RKSQRFPNPVAKFYAA 113
Query: 188 GAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVG 247
L YLH +IYRD K N+LLD N K++DFG A+ P V+ + G
Sbjct: 114 EVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYVPD-----VTYXLCG 165
Query: 248 TYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRR-VLERNRPTMEQKLLEWVKQFP 304
T Y APE + T D WSFG+++YE+L G + N +K+L +FP
Sbjct: 166 TPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFP 223
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 132/288 (45%), Gaps = 39/288 (13%)
Query: 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVK 138
++G G FG V G R G+ + VA+K + G +++ E + + +SH LV+
Sbjct: 11 ELGTGQFGVVKYGKWR---GQYD---VAIKMIKE-GSMSEDEFIEEAKVMMNLSHEKLVQ 63
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHE 198
L G C+ + R I ++ EYM N L + L + + LE+ E + YL
Sbjct: 64 LYGVCTKQ--RPI--FIITEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYLES 118
Query: 199 GLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIE 258
Q ++RD N L++ K+SDFGL+R ++T S ++ PE +
Sbjct: 119 K---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTS-SVGSKFPVRWSPPEVLM 174
Query: 259 TGHLKSQSDIWSFGVVLYEILT-GRRVLER--NRPTMEQKLLEWVKQFPADGKKFSMMID 315
S+SDIW+FGV+++EI + G+ ER N T E A G + +
Sbjct: 175 YSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEH---------IAQGLR---LYR 222
Query: 316 PRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQESE 363
P L A+ +V + +C + +ERPT ++ ++ L V + E
Sbjct: 223 PHL-------ASEKVYTIMYSCWHEKADERPTFKILLSNI-LDVMDEE 262
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 93/206 (45%), Gaps = 15/206 (7%)
Query: 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL---QGHKQWLAEVQFLGVVSHPN 135
K+G+G FG V +G G+ + VAVK L L + ++ EV + + H N
Sbjct: 25 KLGDGSFGVVRRGEWDAPSGK--TVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 82
Query: 136 LVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAY 195
L++L G T + +V E P SL DRL + Q T + AEG+ Y
Sbjct: 83 LIRLYGVVLTPPMK-----MVTELAPLGSLLDRL-RKHQGHFLLGTLSRYAVQVAEGMGY 136
Query: 196 LHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGT-YGYAAP 254
L + I+RD N+LL K+ DFGL R P D +V + + AP
Sbjct: 137 LESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAP 193
Query: 255 EYIETGHLKSQSDIWSFGVVLYEILT 280
E ++T SD W FGV L+E+ T
Sbjct: 194 ESLKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 105/207 (50%), Gaps = 22/207 (10%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKK-LNNHGLQGHKQWLAEVQFLGVVSHPNLVK 138
+GEG FG V K G+ L + KK L +QG + E+ +L ++ HP+++K
Sbjct: 21 LGEGSFGKV-KLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLRHPHIIK 77
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRL-EIILGAAEGLAYLH 197
L ++DE ++V EY N L D + R + + R + I+ A E Y H
Sbjct: 78 LYDVIKSKDEI----IMVIEYAGNE-LFDYIVQRDKMSEQEARRFFQQIISAVE---YCH 129
Query: 198 EGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYI 257
++++RD K N+LLD + K++DFGL+ G+ S G+ YAAPE I
Sbjct: 130 RH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GSPNYAAPEVI 183
Query: 258 ETGHLKS--QSDIWSFGVVLYEILTGR 282
+G L + + D+WS GV+LY +L R
Sbjct: 184 -SGKLYAGPEVDVWSCGVILYVMLCRR 209
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 123/295 (41%), Gaps = 43/295 (14%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLV--VAVKKLNNHGLQGH-KQWLAEVQFLGVVS-HPN 135
+GEG FG V LD V VAVK L + + ++E++ + ++ H N
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 136
Query: 136 LVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPW--------------KT 181
++ LLG C+ + + + EY +L + L +R P L + K
Sbjct: 137 IINLLGACTQDGPLYV----IVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 192
Query: 182 RLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHV 241
+ A G+ YL + I+RD NVL+ + K++DFGLAR+ D+
Sbjct: 193 LVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 249
Query: 242 STAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQ-KLLEWV 300
+T + APE + QSD+WSFGV+L+EI T P E KLL
Sbjct: 250 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLL--- 306
Query: 301 KQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESL 355
K+ M P N + + +C P +RPT Q+VE L
Sbjct: 307 -------KEGHRMDKPS-------NCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 347
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 105/207 (50%), Gaps = 22/207 (10%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKK-LNNHGLQGHKQWLAEVQFLGVVSHPNLVK 138
+GEG FG V K G+ L + KK L +QG + E+ +L ++ HP+++K
Sbjct: 12 LGEGSFGKV-KLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLRHPHIIK 68
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRL-EIILGAAEGLAYLH 197
L ++DE ++V EY N L D + R + + R + I+ A E Y H
Sbjct: 69 LYDVIKSKDEI----IMVIEYAGNE-LFDYIVQRDKMSEQEARRFFQQIISAVE---YCH 120
Query: 198 EGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYI 257
++++RD K N+LLD + K++DFGL+ G+ S G+ YAAPE I
Sbjct: 121 RH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GSPNYAAPEVI 174
Query: 258 ETGHLKS--QSDIWSFGVVLYEILTGR 282
+G L + + D+WS GV+LY +L R
Sbjct: 175 -SGKLYAGPEVDVWSCGVILYVMLCRR 200
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 123/290 (42%), Gaps = 37/290 (12%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQG-HKQWLAEVQFL-GVVSHPNLV 137
+G G FG V + +D VAVK L H+ ++E++ L + H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 138 KLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAY-- 195
LLG C+ + G +++ E+ +L L S+ +P+K + L + Y
Sbjct: 95 NLLGACT---KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSF 151
Query: 196 -LHEGLEI----QVIYRDFKTSNVLLDGNFKPKLSDFGLARE-GPTGDHTHVSTAVVGTY 249
+ +G+E + I+RD N+LL K+ DFGLAR+ D+ A +
Sbjct: 152 QVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL-PL 210
Query: 250 GYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKK 309
+ APE I QSD+WSFGV+L+EI + + P G K
Sbjct: 211 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-------------------LGASPYPGVK 251
Query: 310 FSMMIDPRLRNQYSINA----ARRVAKLADNCLKKNPEERPTMNQVVESL 355
RL+ + A + + +C P +RPT +++VE L
Sbjct: 252 IDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 301
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 102/211 (48%), Gaps = 20/211 (9%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKL 139
IG G FG VY+ L GE +VA+KK+ LQG E+Q + + H N+V+L
Sbjct: 28 IGNGSFGVVYQAK---LCDSGE--LVAIKKV----LQGKAFKNRELQIMRKLDHCNIVRL 78
Query: 140 --LGYCSTEDERGIQRLLVYEYMPNRSLE-DRLFSRAQPTLPWKTRLEIILGAAEGLAYL 196
Y S E + + LV +Y+P R +SRA+ TLP + LAY+
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 197 HEGLEIQVIYRDFKTSNVLLDGNFKP-KLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPE 255
H + +RD K N+LLD + KL DFG A++ G+ + + + + Y APE
Sbjct: 139 HS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSYICSRYYRAPE 192
Query: 256 YI-ETGHLKSQSDIWSFGVVLYEILTGRRVL 285
I S D+WS G VL E+L G+ +
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 89/310 (28%), Positives = 126/310 (40%), Gaps = 55/310 (17%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWL-AEVQFLGVVS-HPNLV 137
+G G FG V + T L L VAVK L + K+ L +E++ + + H N+V
Sbjct: 39 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 98
Query: 138 KLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTL-------------------P 178
LLG C+ G L++ EY L + L +A+ L P
Sbjct: 99 NLLGACT----HGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRP 154
Query: 179 WKTR--LEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTG 236
+ R L A+G+A+L I+RD NVLL K+ DFGLAR+
Sbjct: 155 LELRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMND 211
Query: 237 DHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERN---RPTME 293
+ V + APE I QSD+WS+G++L+EI + L N +
Sbjct: 212 SNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS----LGLNPYPGILVN 267
Query: 294 QKLLEWVKQFPADGKKFSMMIDPRL--RNQYSINAARRVAKLADNCLKKNPEERPTMNQV 351
K + VK DG + M P +N YSI A C P RPT Q+
Sbjct: 268 SKFYKLVK----DGYQ---MAQPAFAPKNIYSIMQA---------CWALEPTHRPTFQQI 311
Query: 352 VESLKLAVQE 361
L+ QE
Sbjct: 312 CSFLQEQAQE 321
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 102/211 (48%), Gaps = 20/211 (9%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKL 139
IG G FG VY+ L GE +VA+KK+ LQG E+Q + + H N+V+L
Sbjct: 28 IGNGSFGVVYQAK---LCDSGE--LVAIKKV----LQGKAFKNRELQIMRKLDHCNIVRL 78
Query: 140 --LGYCSTEDERGIQRLLVYEYMPNRSLE-DRLFSRAQPTLPWKTRLEIILGAAEGLAYL 196
Y S E + + LV +Y+P R +SRA+ TLP + LAY+
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 197 HEGLEIQVIYRDFKTSNVLLDGNFKP-KLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPE 255
H + +RD K N+LLD + KL DFG A++ G+ + + + + Y APE
Sbjct: 139 HS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSRYYRAPE 192
Query: 256 YI-ETGHLKSQSDIWSFGVVLYEILTGRRVL 285
I S D+WS G VL E+L G+ +
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 122/295 (41%), Gaps = 43/295 (14%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLV--VAVKKLNNHGLQGH-KQWLAEVQFLGVVS-HPN 135
+GEG FG V LD V VAVK L + + ++E++ + ++ H N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 136 LVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPW--------------KT 181
++ LLG C+ + + + EY +L + L +R P L + K
Sbjct: 96 IINLLGACTQDGPLYV----IVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKD 151
Query: 182 RLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHV 241
+ A G+ YL + I+RD NVL+ + K++DFGLAR+ D
Sbjct: 152 LVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKK 208
Query: 242 STAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQ-KLLEWV 300
+T + APE + QSD+WSFGV+L+EI T P E KLL
Sbjct: 209 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLL--- 265
Query: 301 KQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESL 355
K+ M P N + + +C P +RPT Q+VE L
Sbjct: 266 -------KEGHRMDKPS-------NCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 306
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 135/291 (46%), Gaps = 45/291 (15%)
Query: 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVK 138
++G G FG V G R G+ + VA+K + G +++ E + + +SH LV+
Sbjct: 15 ELGTGQFGVVKYGKWR---GQYD---VAIKMIKE-GSMSEDEFIEEAKVMMNLSHEKLVQ 67
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHE 198
L G C+ + R I ++ EYM N L + L + + LE+ E + YL
Sbjct: 68 LYGVCTKQ--RPI--FIITEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYLES 122
Query: 199 GLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGT---YGYAAPE 255
Q ++RD N L++ K+SDFGL+R ++T + VG+ ++ PE
Sbjct: 123 K---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYT----SSVGSKFPVRWSPPE 175
Query: 256 YIETGHLKSQSDIWSFGVVLYEILT-GRRVLER--NRPTMEQKLLEWVKQFPADGKKFSM 312
+ S+SDIW+FGV+++EI + G+ ER N T E A G +
Sbjct: 176 VLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEH---------IAQGLR--- 223
Query: 313 MIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQESE 363
+ P L A+ +V + +C + +ERPT ++ ++ L V + E
Sbjct: 224 LYRPHL-------ASEKVYTIMYSCWHEKADERPTFKILLSNI-LDVMDEE 266
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 132/290 (45%), Gaps = 38/290 (13%)
Query: 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVK 138
++G G FG V G R G+ + VA+K + G +++ E + + +SH LV+
Sbjct: 16 ELGTGQFGVVKYGKWR---GQYD---VAIKMIKE-GSMSEDEFIEEAKVMMNLSHEKLVQ 68
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHE 198
L G C+ + R I ++ EYM N L + L + + LE+ E + YL
Sbjct: 69 LYGVCTKQ--RPI--FIITEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYLES 123
Query: 199 GLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIE 258
Q ++RD N L++ K+SDFGL+R ++T S ++ PE +
Sbjct: 124 K---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTS-SVGSKFPVRWSPPEVLM 179
Query: 259 TGHLKSQSDIWSFGVVLYEILT-GRRVLER--NRPTMEQKLLEWVKQFPADGKKFSMMID 315
S+SDIW+FGV+++EI + G+ ER N T E A G + +
Sbjct: 180 YSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEH---------IAQGLR---LYR 227
Query: 316 PRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQESEQG 365
P L A+ +V + +C + +ERPT ++ ++ + E+ G
Sbjct: 228 PHL-------ASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDENLYG 270
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 93/209 (44%), Gaps = 29/209 (13%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQG---HKQWLAEVQFLGVVSHPNL 136
+G+G FG+VY R ++A+K L L+ Q EV+ + HPN+
Sbjct: 20 LGKGKFGNVYLAR-----ERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNI 74
Query: 137 VKLLGYCSTEDERGIQRLLVYEYMP----NRSLEDRLFSRAQPTLPWKTRLEIILGAAEG 192
++L GY + L+ EY P R L+ Q T + T L A
Sbjct: 75 LRLYGYFHD----ATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITEL------ANA 124
Query: 193 LAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYA 252
L+Y H +VI+RD K N+LL N + K++DFG + P+ + GT Y
Sbjct: 125 LSYCHSK---RVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSR----RDTLCGTLDYL 177
Query: 253 APEYIETGHLKSQSDIWSFGVVLYEILTG 281
PE IE + D+WS GV+ YE L G
Sbjct: 178 PPEMIEGRMHDEKVDLWSLGVLCYEFLVG 206
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 85/281 (30%), Positives = 127/281 (45%), Gaps = 45/281 (16%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHK---QWLAEVQFLGVVSHPNL 136
+G G FG V G L G VAVK LN ++ + E+Q L + HP++
Sbjct: 19 LGVGTFGKVKIGE-HQLTGHK----VAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHI 73
Query: 137 VKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRL-EIILGAAEGLAY 195
+KL ST + +V EY+ L D + + RL + IL A + Y
Sbjct: 74 IKLYQVISTPTDF----FMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVD---Y 126
Query: 196 LHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPE 255
H + V++RD K NVLLD + K++DFGL+ G+ S G+ YAAPE
Sbjct: 127 CHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDSC---GSPNYAAPE 180
Query: 256 YIETGHLKS--QSDIWSFGVVLYEILTGRRVL-ERNRPTMEQKLLEWVKQFPADGKKFSM 312
I +G L + + DIWS GV+LY +L G + + PT+ +K+ V P
Sbjct: 181 VI-SGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIP-------- 231
Query: 313 MIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVE 353
+Y R VA L + L+ +P +R T+ + E
Sbjct: 232 --------EY---LNRSVATLLMHMLQVDPLKRATIKDIRE 261
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 129/299 (43%), Gaps = 38/299 (12%)
Query: 58 HLRVFDMQELR-EATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLN-NHGL 115
HLR F Q R + F ++ +IG+G FG VYKG +D + VVA+K ++
Sbjct: 4 HLRGFANQHSRVDPEELFTKLDRIGKGSFGEVYKG----IDNHTKE-VVAIKIIDLEEAE 58
Query: 116 QGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQP 175
+ E+ L P + + G + + ++ EY+ S D L +P
Sbjct: 59 DEIEDIQQEITVLSQCDSPYITRYFGSYL----KSTKLWIIMEYLGGGSALDLL----KP 110
Query: 176 TLPWKTRLEIIL-GAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGP 234
+T + IL +GL YLH + I+RD K +NVLL KL+DFG+A G
Sbjct: 111 GPLEETYIATILREILKGLDYLHSE---RKIHRDIKAANVLLSEQGDVKLADFGVA--GQ 165
Query: 235 TGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQ 294
D VGT + APE I+ ++DIWS G+ E+ G P +
Sbjct: 166 LTDTQIKRNXFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKG------EPPNSDL 219
Query: 295 KLLEWVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVE 353
+ + P + P L Q+S + + + CL K+P RPT ++++
Sbjct: 220 HPMRVLFLIPKNSP-------PTLEGQHS----KPFKEFVEACLNKDPRFRPTAKELLK 267
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 105/207 (50%), Gaps = 22/207 (10%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKK-LNNHGLQGHKQWLAEVQFLGVVSHPNLVK 138
+GEG FG V K G+ L + KK L +QG + E+ +L ++ HP+++K
Sbjct: 16 LGEGSFGKV-KLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLRHPHIIK 72
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRL-EIILGAAEGLAYLH 197
L ++DE ++V EY N L D + R + + R + I+ A E Y H
Sbjct: 73 LYDVIKSKDEI----IMVIEYAGNE-LFDYIVQRDKMSEQEARRFFQQIISAVE---YCH 124
Query: 198 EGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYI 257
++++RD K N+LLD + K++DFGL+ G+ S G+ YAAPE I
Sbjct: 125 RH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GSPNYAAPEVI 178
Query: 258 ETGHLKS--QSDIWSFGVVLYEILTGR 282
+G L + + D+WS GV+LY +L R
Sbjct: 179 -SGKLYAGPEVDVWSCGVILYVMLCRR 204
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 123/290 (42%), Gaps = 37/290 (12%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQG-HKQWLAEVQFL-GVVSHPNLV 137
+G G FG V + +D VAVK L H+ ++E++ L + H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 138 KLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAY-- 195
LLG C+ + G +++ E+ +L L S+ +P+K + L + Y
Sbjct: 95 NLLGACT---KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSF 151
Query: 196 -LHEGLEI----QVIYRDFKTSNVLLDGNFKPKLSDFGLARE-GPTGDHTHVSTAVVGTY 249
+ +G+E + I+RD N+LL K+ DFGLAR+ D+ A +
Sbjct: 152 QVAKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARL-PL 210
Query: 250 GYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKK 309
+ APE I QSD+WSFGV+L+EI + + P G K
Sbjct: 211 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-------------------LGASPYPGVK 251
Query: 310 FSMMIDPRLRNQYSINA----ARRVAKLADNCLKKNPEERPTMNQVVESL 355
RL+ + A + + +C P +RPT +++VE L
Sbjct: 252 IDEEFXRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 301
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 110/213 (51%), Gaps = 20/213 (9%)
Query: 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQG--HKQWLAEVQFLG 129
+ F ++ ++G G G V+K + +P +V +KL + ++ Q + E+Q L
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSG------LVMARKLIHLEIKPAIRNQIIRELQVLH 59
Query: 130 VVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGA 189
+ P +V G ++ E I E+M SL D++ +A +P + ++ +
Sbjct: 60 ECNSPYIVGFYGAFYSDGEISI----CMEHMDGGSL-DQVLKKAG-RIPEQILGKVSIAV 113
Query: 190 AEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTY 249
+GL YL E + ++++RD K SN+L++ + KL DFG++ G D ++ + VGT
Sbjct: 114 IKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--MANSFVGTR 167
Query: 250 GYAAPEYIETGHLKSQSDIWSFGVVLYEILTGR 282
Y +PE ++ H QSDIWS G+ L E+ GR
Sbjct: 168 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 110/213 (51%), Gaps = 20/213 (9%)
Query: 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQG--HKQWLAEVQFLG 129
+ F ++ ++G G G V+K + +P +V +KL + ++ Q + E+Q L
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSG------LVMARKLIHLEIKPAIRNQIIRELQVLH 59
Query: 130 VVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGA 189
+ P +V G ++ E I E+M SL D++ +A +P + ++ +
Sbjct: 60 ECNSPYIVGFYGAFYSDGEISI----CMEHMDGGSL-DQVLKKAG-RIPEQILGKVSIAV 113
Query: 190 AEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTY 249
+GL YL E + ++++RD K SN+L++ + KL DFG++ G D ++ + VGT
Sbjct: 114 IKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--MANSFVGTR 167
Query: 250 GYAAPEYIETGHLKSQSDIWSFGVVLYEILTGR 282
Y +PE ++ H QSDIWS G+ L E+ GR
Sbjct: 168 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 110/213 (51%), Gaps = 20/213 (9%)
Query: 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQG--HKQWLAEVQFLG 129
+ F ++ ++G G G V+K + +P +V +KL + ++ Q + E+Q L
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSG------LVMARKLIHLEIKPAIRNQIIRELQVLH 59
Query: 130 VVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGA 189
+ P +V G ++ E I E+M SL D++ +A +P + ++ +
Sbjct: 60 ECNSPYIVGFYGAFYSDGEISI----CMEHMDGGSL-DQVLKKAG-RIPEQILGKVSIAV 113
Query: 190 AEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTY 249
+GL YL E + ++++RD K SN+L++ + KL DFG++ G D ++ + VGT
Sbjct: 114 IKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--MANSFVGTR 167
Query: 250 GYAAPEYIETGHLKSQSDIWSFGVVLYEILTGR 282
Y +PE ++ H QSDIWS G+ L E+ GR
Sbjct: 168 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 110/213 (51%), Gaps = 20/213 (9%)
Query: 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQG--HKQWLAEVQFLG 129
+ F ++ ++G G G V+K + +P +V +KL + ++ Q + E+Q L
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSG------LVMARKLIHLEIKPAIRNQIIRELQVLH 59
Query: 130 VVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGA 189
+ P +V G ++ E I E+M SL D++ +A +P + ++ +
Sbjct: 60 ECNSPYIVGFYGAFYSDGEISI----CMEHMDGGSL-DQVLKKAG-RIPEQILGKVSIAV 113
Query: 190 AEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTY 249
+GL YL E + ++++RD K SN+L++ + KL DFG++ G D ++ + VGT
Sbjct: 114 IKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--MANSFVGTR 167
Query: 250 GYAAPEYIETGHLKSQSDIWSFGVVLYEILTGR 282
Y +PE ++ H QSDIWS G+ L E+ GR
Sbjct: 168 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 138/302 (45%), Gaps = 46/302 (15%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVS--HPNLV 137
+G+G +G V++G+ +GE VAVK ++ + K W E + V H N++
Sbjct: 16 VGKGRYGEVWRGS-----WQGEN--VAVKIFSS---RDEKSWFRETELYNTVMLRHENIL 65
Query: 138 KLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLH 197
+ T Q L+ Y SL D L TL + L I+L A GLA+LH
Sbjct: 66 GFIASDMTSRHSSTQLWLITHYHEMGSLYDYL---QLTTLDTVSCLRIVLSIASGLAHLH 122
Query: 198 EGLEI-------QVIYRDFKTSNVLLDGNFKPKLSDFGLA--REGPTGDHTHVSTAVVGT 248
+EI + +RD K+ N+L+ N + ++D GLA T + VGT
Sbjct: 123 --IEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGT 180
Query: 249 YGYAAPEYI-ETGHLKS-----QSDIWSFGVVLYEI---LTGRRVLERNRPTMEQKLLEW 299
Y APE + ET + + DIW+FG+VL+E+ + ++E +P +
Sbjct: 181 KRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKP----PFYDV 236
Query: 300 VKQFPA--DGKKFSMMID---PRLRNQ-YSINAARRVAKLADNCLKKNPEERPTMNQVVE 353
V P+ D +K + +D P + N+ +S +AKL C +NP R T ++ +
Sbjct: 237 VPNDPSFEDMRKV-VCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKK 295
Query: 354 SL 355
+L
Sbjct: 296 TL 297
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 138/302 (45%), Gaps = 46/302 (15%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVS--HPNLV 137
+G+G +G V++G+ +GE VAVK ++ + K W E + V H N++
Sbjct: 16 VGKGRYGEVWRGS-----WQGEN--VAVKIFSS---RDEKSWFRETELYNTVMLRHENIL 65
Query: 138 KLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLH 197
+ T Q L+ Y SL D L TL + L I+L A GLA+LH
Sbjct: 66 GFIASDMTSRHSSTQLWLITHYHEMGSLYDYL---QLTTLDTVSCLRIVLSIASGLAHLH 122
Query: 198 EGLEI-------QVIYRDFKTSNVLLDGNFKPKLSDFGLA--REGPTGDHTHVSTAVVGT 248
+EI + +RD K+ N+L+ N + ++D GLA T + VGT
Sbjct: 123 --IEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGT 180
Query: 249 YGYAAPEYI-ETGHLKS-----QSDIWSFGVVLYEI---LTGRRVLERNRPTMEQKLLEW 299
Y APE + ET + + DIW+FG+VL+E+ + ++E +P +
Sbjct: 181 KRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKP----PFYDV 236
Query: 300 VKQFPA--DGKKFSMMID---PRLRNQ-YSINAARRVAKLADNCLKKNPEERPTMNQVVE 353
V P+ D +K + +D P + N+ +S +AKL C +NP R T ++ +
Sbjct: 237 VPNDPSFEDMRKV-VCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKK 295
Query: 354 SL 355
+L
Sbjct: 296 TL 297
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 102/211 (48%), Gaps = 20/211 (9%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKL 139
IG G FG VY+ L GE +VA+KK+ LQ + E+Q + + H N+V+L
Sbjct: 47 IGNGSFGVVYQAK---LCDSGE--LVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRL 97
Query: 140 --LGYCSTEDERGIQRLLVYEYMPNRSLE-DRLFSRAQPTLPWKTRLEIILGAAEGLAYL 196
Y S E + + LV +Y+P R +SRA+ TLP + LAY+
Sbjct: 98 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 157
Query: 197 HEGLEIQVIYRDFKTSNVLLDGNFKP-KLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPE 255
H + +RD K N+LLD + KL DFG A++ G+ + + + + Y APE
Sbjct: 158 HS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSRYYRAPE 211
Query: 256 YI-ETGHLKSQSDIWSFGVVLYEILTGRRVL 285
I S D+WS G VL E+L G+ +
Sbjct: 212 LIFGATDYTSSIDVWSAGCVLAELLLGQPIF 242
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 102/211 (48%), Gaps = 20/211 (9%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKL 139
IG G FG VY+ L GE +VA+KK+ LQ + E+Q + + H N+V+L
Sbjct: 36 IGNGSFGVVYQAK---LCDSGE--LVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRL 86
Query: 140 --LGYCSTEDERGIQRLLVYEYMPNRSLE-DRLFSRAQPTLPWKTRLEIILGAAEGLAYL 196
Y S E + + LV +Y+P R +SRA+ TLP + LAY+
Sbjct: 87 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 146
Query: 197 HEGLEIQVIYRDFKTSNVLLDGNFKP-KLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPE 255
H + +RD K N+LLD + KL DFG A++ G+ + + + + Y APE
Sbjct: 147 HS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSRYYRAPE 200
Query: 256 YI-ETGHLKSQSDIWSFGVVLYEILTGRRVL 285
I S D+WS G VL E+L G+ +
Sbjct: 201 LIFGATDYTSSIDVWSAGCVLAELLLGQPIF 231
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 127/303 (41%), Gaps = 41/303 (13%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQG-HKQWLAEVQFL-GVVSHPNLV 137
+G G FG V + +D VAVK L H+ ++E++ L + H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 138 KLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYL- 196
LLG C+ + G +++ E+ +L L S+ +P+K E + L +L
Sbjct: 95 NLLGACT---KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 151
Query: 197 ------HEGLEI----QVIYRDFKTSNVLLDGNFKPKLSDFGLARE-GPTGDHTHVSTAV 245
+G+E + I+RD N+LL K+ DFGLAR+ D+ A
Sbjct: 152 CYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 211
Query: 246 VGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPA 305
+ + APE I QSD+WSFGV+L+EI + + P
Sbjct: 212 L-PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-------------------LGASPY 251
Query: 306 DGKKFSMMIDPRLRNQYSINA----ARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQE 361
G K RL+ + A + + +C P +RPT +++VE L +Q
Sbjct: 252 PGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 311
Query: 362 SEQ 364
+ Q
Sbjct: 312 NAQ 314
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 127/303 (41%), Gaps = 41/303 (13%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQG-HKQWLAEVQFL-GVVSHPNLV 137
+G G FG V + +D VAVK L H+ ++E++ L + H N+V
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 131
Query: 138 KLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYL- 196
LLG C+ + G +++ E+ +L L S+ +P+K E + L +L
Sbjct: 132 NLLGACT---KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 188
Query: 197 ------HEGLEI----QVIYRDFKTSNVLLDGNFKPKLSDFGLARE-GPTGDHTHVSTAV 245
+G+E + I+RD N+LL K+ DFGLAR+ D+ A
Sbjct: 189 CYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 248
Query: 246 VGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPA 305
+ + APE I QSD+WSFGV+L+EI + + P
Sbjct: 249 L-PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-------------------LGASPY 288
Query: 306 DGKKFSMMIDPRLRNQYSINA----ARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQE 361
G K RL+ + A + + +C P +RPT +++VE L +Q
Sbjct: 289 PGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 348
Query: 362 SEQ 364
+ Q
Sbjct: 349 NAQ 351
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 127/303 (41%), Gaps = 41/303 (13%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQG-HKQWLAEVQFL-GVVSHPNLV 137
+G G FG V + +D VAVK L H+ ++E++ L + H N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 138 KLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYL- 196
LLG C+ + G +++ E+ +L L S+ +P+K E + L +L
Sbjct: 86 NLLGACT---KPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 142
Query: 197 ------HEGLEI----QVIYRDFKTSNVLLDGNFKPKLSDFGLARE-GPTGDHTHVSTAV 245
+G+E + I+RD N+LL K+ DFGLAR+ D+ A
Sbjct: 143 CYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 202
Query: 246 VGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPA 305
+ + APE I QSD+WSFGV+L+EI + + P
Sbjct: 203 L-PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-------------------LGASPY 242
Query: 306 DGKKFSMMIDPRLRNQYSINA----ARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQE 361
G K RL+ + A + + +C P +RPT +++VE L +Q
Sbjct: 243 PGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 302
Query: 362 SEQ 364
+ Q
Sbjct: 303 NAQ 305
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 102/211 (48%), Gaps = 20/211 (9%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKL 139
IG G FG VY+ L GE +VA+KK+ LQ + E+Q + + H N+V+L
Sbjct: 62 IGNGSFGVVYQAK---LCDSGE--LVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRL 112
Query: 140 --LGYCSTEDERGIQRLLVYEYMPNRSLE-DRLFSRAQPTLPWKTRLEIILGAAEGLAYL 196
Y S E + + LV +Y+P R +SRA+ TLP + LAY+
Sbjct: 113 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 172
Query: 197 HEGLEIQVIYRDFKTSNVLLDGNFKP-KLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPE 255
H + +RD K N+LLD + KL DFG A++ G+ + + + + Y APE
Sbjct: 173 HS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSRYYRAPE 226
Query: 256 YI-ETGHLKSQSDIWSFGVVLYEILTGRRVL 285
I S D+WS G VL E+L G+ +
Sbjct: 227 LIFGATDYTSSIDVWSAGCVLAELLLGQPIF 257
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 138/302 (45%), Gaps = 46/302 (15%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVS--HPNLV 137
+G+G +G V++G+ +GE VAVK ++ + K W E + V H N++
Sbjct: 45 VGKGRYGEVWRGS-----WQGEN--VAVKIFSS---RDEKSWFRETELYNTVMLRHENIL 94
Query: 138 KLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLH 197
+ T Q L+ Y SL D L TL + L I+L A GLA+LH
Sbjct: 95 GFIASDMTSRHSSTQLWLITHYHEMGSLYDYL---QLTTLDTVSCLRIVLSIASGLAHLH 151
Query: 198 EGLEI-------QVIYRDFKTSNVLLDGNFKPKLSDFGLA--REGPTGDHTHVSTAVVGT 248
+EI + +RD K+ N+L+ N + ++D GLA T + VGT
Sbjct: 152 --IEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGT 209
Query: 249 YGYAAPEYI-ETGHLKS-----QSDIWSFGVVLYEI---LTGRRVLERNRPTMEQKLLEW 299
Y APE + ET + + DIW+FG+VL+E+ + ++E +P +
Sbjct: 210 KRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKP----PFYDV 265
Query: 300 VKQFPA--DGKKFSMMID---PRLRNQ-YSINAARRVAKLADNCLKKNPEERPTMNQVVE 353
V P+ D +K + +D P + N+ +S +AKL C +NP R T ++ +
Sbjct: 266 VPNDPSFEDMRKV-VCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKK 324
Query: 354 SL 355
+L
Sbjct: 325 TL 326
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 100/221 (45%), Gaps = 26/221 (11%)
Query: 77 MLKIGEGGFGSVYKGTIR-PLDGRGEPLVVAVKKLNNHGLQG--HKQWLAEVQFLGVVSH 133
M ++GE FG VYKG + P G + VA+K L + +G +++ E + H
Sbjct: 31 MEELGEDRFGKVYKGHLFGPAPGE-QTQAVAIKTLKDKA-EGPLREEFRHEAMLRARLQH 88
Query: 134 PNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRA--------------QPTLPW 179
PN+V LLG + + +++ Y + L + L R+ + L
Sbjct: 89 PNVVCLLGVVTKDQPLS----MIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEP 144
Query: 180 KTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHT 239
+ ++ A G+ YL V+++D T NVL+ K+SD GL RE D+
Sbjct: 145 PDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYY 201
Query: 240 HVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILT 280
+ + + APE I G SDIWS+GVVL+E+ +
Sbjct: 202 KLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 242
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 102/211 (48%), Gaps = 20/211 (9%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKL 139
IG G FG VY+ L GE +VA+KK+ LQ + E+Q + + H N+V+L
Sbjct: 40 IGNGSFGVVYQAK---LCDSGE--LVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRL 90
Query: 140 --LGYCSTEDERGIQRLLVYEYMPNRSLE-DRLFSRAQPTLPWKTRLEIILGAAEGLAYL 196
Y S E + + LV +Y+P R +SRA+ TLP + LAY+
Sbjct: 91 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 150
Query: 197 HEGLEIQVIYRDFKTSNVLLDGNFKP-KLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPE 255
H + +RD K N+LLD + KL DFG A++ G+ + + + + Y APE
Sbjct: 151 HS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSRYYRAPE 204
Query: 256 YI-ETGHLKSQSDIWSFGVVLYEILTGRRVL 285
I S D+WS G VL E+L G+ +
Sbjct: 205 LIFGATDYTSSIDVWSAGCVLAELLLGQPIF 235
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 127/303 (41%), Gaps = 41/303 (13%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQG-HKQWLAEVQFL-GVVSHPNLV 137
+G G FG V + +D VAVK L H+ ++E++ L + H N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 138 KLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYL- 196
LLG C+ + G +++ E+ +L L S+ +P+K E + L +L
Sbjct: 86 NLLGACT---KPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 142
Query: 197 ------HEGLEI----QVIYRDFKTSNVLLDGNFKPKLSDFGLARE-GPTGDHTHVSTAV 245
+G+E + I+RD N+LL K+ DFGLAR+ D+ A
Sbjct: 143 CYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 202
Query: 246 VGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPA 305
+ + APE I QSD+WSFGV+L+EI + + P
Sbjct: 203 L-PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-------------------LGASPY 242
Query: 306 DGKKFSMMIDPRLRNQYSINA----ARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQE 361
G K RL+ + A + + +C P +RPT +++VE L +Q
Sbjct: 243 PGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 302
Query: 362 SEQ 364
+ Q
Sbjct: 303 NAQ 305
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 124/279 (44%), Gaps = 37/279 (13%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLA-EVQFLGVVSHPNLVK 138
+G G F V I D R + LV A+K + L+G + + E+ L + HPN+V
Sbjct: 26 LGTGAFSEV----ILAEDKRTQKLV-AIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVA 80
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHE 198
L E G L+ + + L DR+ + T +RL I + + YLH+
Sbjct: 81 L----DDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRL--IFQVLDAVKYLHD 134
Query: 199 GLEIQVIYRDFKTSNVL---LDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPE 255
+ +++RD K N+L LD + K +SDFGL++ G V + GT GY APE
Sbjct: 135 ---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS---VLSTACGTPGYVAPE 188
Query: 256 YIETGHLKSQSDIWSFGVVLYEILTGR-RVLERNRPTMEQKLLEWVKQFPADGKKFSMMI 314
+ D WS GV+ Y +L G + N + +++L+ +F
Sbjct: 189 VLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEF----------- 237
Query: 315 DPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVE 353
D + S +A + L ++K+PE+R T Q ++
Sbjct: 238 DSPYWDDISDSAKDFIRHL----MEKDPEKRFTCEQALQ 272
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 102/211 (48%), Gaps = 20/211 (9%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKL 139
IG G FG VY+ L GE +VA+KK+ LQ + E+Q + + H N+V+L
Sbjct: 62 IGNGSFGVVYQAK---LCDSGE--LVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRL 112
Query: 140 --LGYCSTEDERGIQRLLVYEYMPNRSLE-DRLFSRAQPTLPWKTRLEIILGAAEGLAYL 196
Y S E + + LV +Y+P R +SRA+ TLP + LAY+
Sbjct: 113 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 172
Query: 197 HEGLEIQVIYRDFKTSNVLLDGNFKP-KLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPE 255
H + +RD K N+LLD + KL DFG A++ G+ + + + + Y APE
Sbjct: 173 HS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSYICSRYYRAPE 226
Query: 256 YI-ETGHLKSQSDIWSFGVVLYEILTGRRVL 285
I S D+WS G VL E+L G+ +
Sbjct: 227 LIFGATDYTSSIDVWSAGCVLAELLLGQPIF 257
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 102/211 (48%), Gaps = 20/211 (9%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKL 139
IG G FG VY+ L GE +VA+KK+ LQ + E+Q + + H N+V+L
Sbjct: 41 IGNGSFGVVYQAK---LCDSGE--LVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRL 91
Query: 140 --LGYCSTEDERGIQRLLVYEYMPNRSLE-DRLFSRAQPTLPWKTRLEIILGAAEGLAYL 196
Y S E + + LV +Y+P R +SRA+ TLP + LAY+
Sbjct: 92 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 151
Query: 197 HEGLEIQVIYRDFKTSNVLLDGNFKP-KLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPE 255
H + +RD K N+LLD + KL DFG A++ G+ + + + + Y APE
Sbjct: 152 HS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSYICSRYYRAPE 205
Query: 256 YI-ETGHLKSQSDIWSFGVVLYEILTGRRVL 285
I S D+WS G VL E+L G+ +
Sbjct: 206 LIFGATDYTSSIDVWSAGCVLAELLLGQPIF 236
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 102/211 (48%), Gaps = 20/211 (9%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKL 139
IG G FG VY+ L GE +VA+KK+ LQ + E+Q + + H N+V+L
Sbjct: 40 IGNGSFGVVYQAK---LCDSGE--LVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRL 90
Query: 140 --LGYCSTEDERGIQRLLVYEYMPNRSLE-DRLFSRAQPTLPWKTRLEIILGAAEGLAYL 196
Y S E + + LV +Y+P R +SRA+ TLP + LAY+
Sbjct: 91 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 150
Query: 197 HEGLEIQVIYRDFKTSNVLLDGNFKP-KLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPE 255
H + +RD K N+LLD + KL DFG A++ G+ + + + + Y APE
Sbjct: 151 HS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSRYYRAPE 204
Query: 256 YI-ETGHLKSQSDIWSFGVVLYEILTGRRVL 285
I S D+WS G VL E+L G+ +
Sbjct: 205 LIFGATDYTSSIDVWSAGCVLAELLLGQPIF 235
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 135/291 (46%), Gaps = 45/291 (15%)
Query: 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVK 138
++G G FG V G R G+ + VA+K + G +++ E + + +SH LV+
Sbjct: 22 ELGTGQFGVVKYGKWR---GQYD---VAIKMIKE-GSMSEDEFIEEAKVMMNLSHEKLVQ 74
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHE 198
L G C+ + R I ++ EYM N L + L + + LE+ E + YL
Sbjct: 75 LYGVCTKQ--RPI--FIITEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYLES 129
Query: 199 GLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGT---YGYAAPE 255
Q ++RD N L++ K+SDFGL+R ++T + VG+ ++ PE
Sbjct: 130 K---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYT----SSVGSKFPVRWSPPE 182
Query: 256 YIETGHLKSQSDIWSFGVVLYEILT-GRRVLER--NRPTMEQKLLEWVKQFPADGKKFSM 312
+ S+SDIW+FGV+++EI + G+ ER N T E A G +
Sbjct: 183 VLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEH---------IAQGLR--- 230
Query: 313 MIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQESE 363
+ P L A+ +V + +C + +ERPT ++ ++ L V + E
Sbjct: 231 LYRPHL-------ASEKVYTIMYSCWHEKADERPTFKILLSNI-LDVMDEE 273
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 123/302 (40%), Gaps = 39/302 (12%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQG-HKQWLAEVQFL-GVVSHPNLV 137
+G G FG V + +D VAVK L H+ ++E++ L + H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 138 KLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYL- 196
LLG C+ + G +++ E+ +L L S+ +P+K E + L +L
Sbjct: 95 NLLGACT---KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 151
Query: 197 ------HEGLEI----QVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVV 246
+G+E + I+RD N+LL K+ DFGLAR+
Sbjct: 152 CYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 211
Query: 247 GTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPAD 306
+ APE I QSD+WSFGV+L+EI + + P
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-------------------LGASPYP 252
Query: 307 GKKFSMMIDPRLRNQYSINA----ARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQES 362
G K RL+ + A + + +C P +RPT +++VE L +Q +
Sbjct: 253 GVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 312
Query: 363 EQ 364
Q
Sbjct: 313 AQ 314
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 132/288 (45%), Gaps = 39/288 (13%)
Query: 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVK 138
++G G FG V G R G+ + VA+K + G +++ E + + +SH LV+
Sbjct: 31 ELGTGQFGVVKYGKWR---GQYD---VAIKMIKE-GSMSEDEFIEEAKVMMNLSHEKLVQ 83
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHE 198
L G C+ + R I ++ EYM N L + L + + LE+ E + YL
Sbjct: 84 LYGVCTKQ--RPI--FIITEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYLES 138
Query: 199 GLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIE 258
Q ++RD N L++ K+SDFGL+R ++T S ++ PE +
Sbjct: 139 K---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTS-SVGSKFPVRWSPPEVLM 194
Query: 259 TGHLKSQSDIWSFGVVLYEILT-GRRVLER--NRPTMEQKLLEWVKQFPADGKKFSMMID 315
S+SDIW+FGV+++EI + G+ ER N T E A G + +
Sbjct: 195 YSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEH---------IAQGLR---LYR 242
Query: 316 PRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQESE 363
P L A+ +V + +C + +ERPT ++ ++ L V + E
Sbjct: 243 PHL-------ASEKVYTIMYSCWHEKADERPTFKILLSNI-LDVMDEE 282
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 102/211 (48%), Gaps = 20/211 (9%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKL 139
IG G FG VY+ L GE +VA+KK+ LQ + E+Q + + H N+V+L
Sbjct: 64 IGNGSFGVVYQAK---LCDSGE--LVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRL 114
Query: 140 --LGYCSTEDERGIQRLLVYEYMPNRSLE-DRLFSRAQPTLPWKTRLEIILGAAEGLAYL 196
Y S E + + LV +Y+P R +SRA+ TLP + LAY+
Sbjct: 115 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 174
Query: 197 HEGLEIQVIYRDFKTSNVLLDGNFKP-KLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPE 255
H + +RD K N+LLD + KL DFG A++ G+ + + + + Y APE
Sbjct: 175 HS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSYICSRYYRAPE 228
Query: 256 YI-ETGHLKSQSDIWSFGVVLYEILTGRRVL 285
I S D+WS G VL E+L G+ +
Sbjct: 229 LIFGATDYTSSIDVWSAGCVLAELLLGQPIF 259
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 102/211 (48%), Gaps = 20/211 (9%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKL 139
IG G FG VY+ L GE +VA+KK+ LQ + E+Q + + H N+V+L
Sbjct: 56 IGNGSFGVVYQAK---LCDSGE--LVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRL 106
Query: 140 --LGYCSTEDERGIQRLLVYEYMPNRSLE-DRLFSRAQPTLPWKTRLEIILGAAEGLAYL 196
Y S E + + LV +Y+P R +SRA+ TLP + LAY+
Sbjct: 107 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 166
Query: 197 HEGLEIQVIYRDFKTSNVLLDGNFKP-KLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPE 255
H + +RD K N+LLD + KL DFG A++ G+ + + + + Y APE
Sbjct: 167 HS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSYICSRYYRAPE 220
Query: 256 YI-ETGHLKSQSDIWSFGVVLYEILTGRRVL 285
I S D+WS G VL E+L G+ +
Sbjct: 221 LIFGATDYTSSIDVWSAGCVLAELLLGQPIF 251
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 102/211 (48%), Gaps = 20/211 (9%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKL 139
IG G FG VY+ L GE +VA+KK+ LQ + E+Q + + H N+V+L
Sbjct: 29 IGNGSFGVVYQAK---LCDSGE--LVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRL 79
Query: 140 --LGYCSTEDERGIQRLLVYEYMPNRSLE-DRLFSRAQPTLPWKTRLEIILGAAEGLAYL 196
Y S E + + LV +Y+P R +SRA+ TLP + LAY+
Sbjct: 80 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 139
Query: 197 HEGLEIQVIYRDFKTSNVLLDGNFKP-KLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPE 255
H + +RD K N+LLD + KL DFG A++ G+ + + + + Y APE
Sbjct: 140 HS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSRYYRAPE 193
Query: 256 YI-ETGHLKSQSDIWSFGVVLYEILTGRRVL 285
I S D+WS G VL E+L G+ +
Sbjct: 194 LIFGATDYTSSIDVWSAGCVLAELLLGQPIF 224
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 102/211 (48%), Gaps = 20/211 (9%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKL 139
IG G FG VY+ L GE +VA+KK+ LQ + E+Q + + H N+V+L
Sbjct: 28 IGNGSFGVVYQAK---LCDSGE--LVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRL 78
Query: 140 --LGYCSTEDERGIQRLLVYEYMPNRSLE-DRLFSRAQPTLPWKTRLEIILGAAEGLAYL 196
Y S E + + LV +Y+P R +SRA+ TLP + LAY+
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 197 HEGLEIQVIYRDFKTSNVLLDGNFKP-KLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPE 255
H + +RD K N+LLD + KL DFG A++ G+ + + + + Y APE
Sbjct: 139 HS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSRYYRAPE 192
Query: 256 YI-ETGHLKSQSDIWSFGVVLYEILTGRRVL 285
I S D+WS G VL E+L G+ +
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 123/302 (40%), Gaps = 39/302 (12%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQG-HKQWLAEVQFL-GVVSHPNLV 137
+G G FG V + +D VAVK L H+ ++E++ L + H N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 138 KLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYL- 196
LLG C+ + G +++ E+ +L L S+ +P+K E + L +L
Sbjct: 86 NLLGACT---KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 142
Query: 197 ------HEGLEI----QVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVV 246
+G+E + I+RD N+LL K+ DFGLAR+
Sbjct: 143 CYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 202
Query: 247 GTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPAD 306
+ APE I QSD+WSFGV+L+EI + + P
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-------------------LGASPYP 243
Query: 307 GKKFSMMIDPRLRNQYSINA----ARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQES 362
G K RL+ + A + + +C P +RPT +++VE L +Q +
Sbjct: 244 GVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 303
Query: 363 EQ 364
Q
Sbjct: 304 AQ 305
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 124/279 (44%), Gaps = 37/279 (13%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLA-EVQFLGVVSHPNLVK 138
+G G F V I D R + LV A+K + L+G + + E+ L + HPN+V
Sbjct: 26 LGTGAFSEV----ILAEDKRTQKLV-AIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVA 80
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHE 198
L E G L+ + + L DR+ + T +RL I + + YLH+
Sbjct: 81 L----DDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRL--IFQVLDAVKYLHD 134
Query: 199 GLEIQVIYRDFKTSNVL---LDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPE 255
+ +++RD K N+L LD + K +SDFGL++ G V + GT GY APE
Sbjct: 135 ---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS---VLSTACGTPGYVAPE 188
Query: 256 YIETGHLKSQSDIWSFGVVLYEILTGR-RVLERNRPTMEQKLLEWVKQFPADGKKFSMMI 314
+ D WS GV+ Y +L G + N + +++L+ +F
Sbjct: 189 VLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEF----------- 237
Query: 315 DPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVE 353
D + S +A + L ++K+PE+R T Q ++
Sbjct: 238 DSPYWDDISDSAKDFIRHL----MEKDPEKRFTCEQALQ 272
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 102/211 (48%), Gaps = 20/211 (9%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKL 139
IG G FG VY+ L GE +VA+KK+ LQ + E+Q + + H N+V+L
Sbjct: 28 IGNGSFGVVYQAK---LCDSGE--LVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRL 78
Query: 140 --LGYCSTEDERGIQRLLVYEYMPNRSLE-DRLFSRAQPTLPWKTRLEIILGAAEGLAYL 196
Y S E + + LV +Y+P R +SRA+ TLP + LAY+
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 197 HEGLEIQVIYRDFKTSNVLLDGNFKP-KLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPE 255
H + +RD K N+LLD + KL DFG A++ G+ + + + + Y APE
Sbjct: 139 HS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSRYYRAPE 192
Query: 256 YI-ETGHLKSQSDIWSFGVVLYEILTGRRVL 285
I S D+WS G VL E+L G+ +
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 124/279 (44%), Gaps = 37/279 (13%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLA-EVQFLGVVSHPNLVK 138
+G G F V I D R + LV A+K + L+G + + E+ L + HPN+V
Sbjct: 26 LGTGAFSEV----ILAEDKRTQKLV-AIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVA 80
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHE 198
L E G L+ + + L DR+ + T +RL I + + YLH+
Sbjct: 81 L----DDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRL--IFQVLDAVKYLHD 134
Query: 199 GLEIQVIYRDFKTSNVL---LDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPE 255
+ +++RD K N+L LD + K +SDFGL++ G V + GT GY APE
Sbjct: 135 ---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPG---SVLSTACGTPGYVAPE 188
Query: 256 YIETGHLKSQSDIWSFGVVLYEILTGR-RVLERNRPTMEQKLLEWVKQFPADGKKFSMMI 314
+ D WS GV+ Y +L G + N + +++L+ +F
Sbjct: 189 VLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEF----------- 237
Query: 315 DPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVE 353
D + S +A + L ++K+PE+R T Q ++
Sbjct: 238 DSPYWDDISDSAKDFIRHL----MEKDPEKRFTCEQALQ 272
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 102/211 (48%), Gaps = 20/211 (9%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKL 139
IG G FG VY+ L GE +VA+KK+ LQ + E+Q + + H N+V+L
Sbjct: 28 IGNGSFGVVYQAK---LCDSGE--LVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRL 78
Query: 140 --LGYCSTEDERGIQRLLVYEYMPNRSLE-DRLFSRAQPTLPWKTRLEIILGAAEGLAYL 196
Y S E + + LV +Y+P R +SRA+ TLP + LAY+
Sbjct: 79 RYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 197 HEGLEIQVIYRDFKTSNVLLDGNFKP-KLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPE 255
H + +RD K N+LLD + KL DFG A++ G+ + + + + Y APE
Sbjct: 139 HS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSRYYRAPE 192
Query: 256 YI-ETGHLKSQSDIWSFGVVLYEILTGRRVL 285
I S D+WS G VL E+L G+ +
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 102/211 (48%), Gaps = 20/211 (9%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKL 139
IG G FG VY+ L GE +VA+KK+ LQ + E+Q + + H N+V+L
Sbjct: 28 IGNGSFGVVYQAK---LCDSGE--LVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRL 78
Query: 140 --LGYCSTEDERGIQRLLVYEYMPNRSLE-DRLFSRAQPTLPWKTRLEIILGAAEGLAYL 196
Y S E + + LV +Y+P R +SRA+ TLP + LAY+
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 197 HEGLEIQVIYRDFKTSNVLLDGNFKP-KLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPE 255
H + +RD K N+LLD + KL DFG A++ G+ + + + + Y APE
Sbjct: 139 HS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSYICSRYYRAPE 192
Query: 256 YI-ETGHLKSQSDIWSFGVVLYEILTGRRVL 285
I S D+WS G VL E+L G+ +
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 127/303 (41%), Gaps = 41/303 (13%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQG-HKQWLAEVQFL-GVVSHPNLV 137
+G G FG V + +D VAVK L H+ ++E++ L + H N+V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 138 KLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYL- 196
LLG C+ + G +++ E+ +L L S+ +P+K E + L +L
Sbjct: 97 NLLGACT---KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLI 153
Query: 197 ------HEGLEI----QVIYRDFKTSNVLLDGNFKPKLSDFGLARE-GPTGDHTHVSTAV 245
+G+E + I+RD N+LL K+ DFGLAR+ D+ A
Sbjct: 154 CYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 213
Query: 246 VGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPA 305
+ + APE I QSD+WSFGV+L+EI + + P
Sbjct: 214 L-PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-------------------LGASPY 253
Query: 306 DGKKFSMMIDPRLRNQYSINA----ARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQE 361
G K RL+ + A + + +C P +RPT +++VE L +Q
Sbjct: 254 PGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 313
Query: 362 SEQ 364
+ Q
Sbjct: 314 NAQ 316
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 128/280 (45%), Gaps = 38/280 (13%)
Query: 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVK 138
++G G FG V G R G+ + VA+K + G +++ E + + +SH LV+
Sbjct: 16 ELGTGQFGVVKYGKWR---GQYD---VAIKMIKE-GSMSEDEFIEEAKVMMNLSHEKLVQ 68
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHE 198
L G C+ + R I ++ EYM N L + L + + LE+ E + YL
Sbjct: 69 LYGVCTKQ--RPI--FIITEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYLES 123
Query: 199 GLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIE 258
Q ++RD N L++ K+SDFGL+R ++T S ++ PE +
Sbjct: 124 K---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTS-SRGSKFPVRWSPPEVLM 179
Query: 259 TGHLKSQSDIWSFGVVLYEILT-GRRVLER--NRPTMEQKLLEWVKQFPADGKKFSMMID 315
S+SDIW+FGV+++EI + G+ ER N T E A G + +
Sbjct: 180 YSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEH---------IAQGLR---LYR 227
Query: 316 PRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESL 355
P L A+ +V + +C + +ERPT ++ ++
Sbjct: 228 PHL-------ASEKVYTIMYSCWHEKADERPTFKILLSNI 260
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 123/302 (40%), Gaps = 39/302 (12%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQG-HKQWLAEVQFL-GVVSHPNLV 137
+G G FG V + +D VAVK L H+ ++E++ L + H N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 138 KLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYL- 196
LLG C+ + G +++ E+ +L L S+ +P+K E + L +L
Sbjct: 86 NLLGACT---KPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 142
Query: 197 ------HEGLEI----QVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVV 246
+G+E + I+RD N+LL K+ DFGLAR+
Sbjct: 143 CYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 202
Query: 247 GTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPAD 306
+ APE I QSD+WSFGV+L+EI + + P
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-------------------LGASPYP 243
Query: 307 GKKFSMMIDPRLRNQYSINA----ARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQES 362
G K RL+ + A + + +C P +RPT +++VE L +Q +
Sbjct: 244 GVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 303
Query: 363 EQ 364
Q
Sbjct: 304 AQ 305
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 102/211 (48%), Gaps = 20/211 (9%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKL 139
IG G FG VY+ L GE +VA+KK+ LQ + E+Q + + H N+V+L
Sbjct: 33 IGNGSFGVVYQAK---LCDSGE--LVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRL 83
Query: 140 --LGYCSTEDERGIQRLLVYEYMPNRSLE-DRLFSRAQPTLPWKTRLEIILGAAEGLAYL 196
Y S E + + LV +Y+P R +SRA+ TLP + LAY+
Sbjct: 84 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 143
Query: 197 HEGLEIQVIYRDFKTSNVLLDGNFKP-KLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPE 255
H + +RD K N+LLD + KL DFG A++ G+ + + + + Y APE
Sbjct: 144 HS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSYICSRYYRAPE 197
Query: 256 YI-ETGHLKSQSDIWSFGVVLYEILTGRRVL 285
I S D+WS G VL E+L G+ +
Sbjct: 198 LIFGATDYTSSIDVWSAGCVLAELLLGQPIF 228
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 102/211 (48%), Gaps = 20/211 (9%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKL 139
IG G FG VY+ L GE +VA+KK+ LQ + E+Q + + H N+V+L
Sbjct: 66 IGNGSFGVVYQAK---LCDSGE--LVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRL 116
Query: 140 --LGYCSTEDERGIQRLLVYEYMPNRSLE-DRLFSRAQPTLPWKTRLEIILGAAEGLAYL 196
Y S E + + LV +Y+P R +SRA+ TLP + LAY+
Sbjct: 117 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 176
Query: 197 HEGLEIQVIYRDFKTSNVLLDGNFKP-KLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPE 255
H + +RD K N+LLD + KL DFG A++ G+ + + + + Y APE
Sbjct: 177 HS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSYICSRYYRAPE 230
Query: 256 YI-ETGHLKSQSDIWSFGVVLYEILTGRRVL 285
I S D+WS G VL E+L G+ +
Sbjct: 231 LIFGATDYTSSIDVWSAGCVLAELLLGQPIF 261
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 102/211 (48%), Gaps = 20/211 (9%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKL 139
IG G FG VY+ L GE +VA+KK+ LQ + E+Q + + H N+V+L
Sbjct: 107 IGNGSFGVVYQAK---LCDSGE--LVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRL 157
Query: 140 --LGYCSTEDERGIQRLLVYEYMPNRSLE-DRLFSRAQPTLPWKTRLEIILGAAEGLAYL 196
Y S E + + LV +Y+P R +SRA+ TLP + LAY+
Sbjct: 158 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 217
Query: 197 HEGLEIQVIYRDFKTSNVLLDGNFKP-KLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPE 255
H + +RD K N+LLD + KL DFG A++ G+ + + + + Y APE
Sbjct: 218 HS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSYICSRYYRAPE 271
Query: 256 YI-ETGHLKSQSDIWSFGVVLYEILTGRRVL 285
I S D+WS G VL E+L G+ +
Sbjct: 272 LIFGATDYTSSIDVWSAGCVLAELLLGQPIF 302
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 102/211 (48%), Gaps = 20/211 (9%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKL 139
IG G FG VY+ L GE +VA+KK+ LQ + E+Q + + H N+V+L
Sbjct: 32 IGNGSFGVVYQAK---LCDSGE--LVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRL 82
Query: 140 --LGYCSTEDERGIQRLLVYEYMPNRSLE-DRLFSRAQPTLPWKTRLEIILGAAEGLAYL 196
Y S E + + LV +Y+P R +SRA+ TLP + LAY+
Sbjct: 83 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 142
Query: 197 HEGLEIQVIYRDFKTSNVLLDGNFKP-KLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPE 255
H + +RD K N+LLD + KL DFG A++ G+ + + + + Y APE
Sbjct: 143 HS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSRYYRAPE 196
Query: 256 YI-ETGHLKSQSDIWSFGVVLYEILTGRRVL 285
I S D+WS G VL E+L G+ +
Sbjct: 197 LIFGATDYTSSIDVWSAGCVLAELLLGQPIF 227
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 126/281 (44%), Gaps = 41/281 (14%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLA-EVQFLGVVSHPNLVK 138
+G G F V I D R + LV A+K + L+G + + E+ L + HPN+V
Sbjct: 26 LGTGAFSEV----ILAEDKRTQKLV-AIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVA 80
Query: 139 LLGYCSTED--ERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYL 196
L +D E G L+ + + L DR+ + T +RL I + + YL
Sbjct: 81 L------DDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRL--IFQVLDAVKYL 132
Query: 197 HEGLEIQVIYRDFKTSNVL---LDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAA 253
H+ + +++RD K N+L LD + K +SDFGL++ G V + GT GY A
Sbjct: 133 HD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS---VLSTACGTPGYVA 186
Query: 254 PEYIETGHLKSQSDIWSFGVVLYEILTGR-RVLERNRPTMEQKLLEWVKQFPADGKKFSM 312
PE + D WS GV+ Y +L G + N + +++L+ +F
Sbjct: 187 PEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEF--------- 237
Query: 313 MIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVE 353
D + S +A + L ++K+PE+R T Q ++
Sbjct: 238 --DSPYWDDISDSAKDFIRHL----MEKDPEKRFTCEQALQ 272
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 103/209 (49%), Gaps = 26/209 (12%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQG---HKQWLAEVQFLGVVSHPNL 136
+GEG FG V T + VA+K ++ L+ H + E+ +L ++ HP++
Sbjct: 17 LGEGSFGKVKLATHYKTQQK-----VALKFISRQLLKKSDMHMRVEREISYLKLLRHPHI 71
Query: 137 VKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRL-EIILGAAEGLAY 195
+KL +T + ++V EY L D + + + T R + I+ A E Y
Sbjct: 72 IKLYDVITTPTDI----VMVIEY-AGGELFDYIVEKKRMTEDEGRRFFQQIICAIE---Y 123
Query: 196 LHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPE 255
H ++++RD K N+LLD N K++DFGL+ G+ S G+ YAAPE
Sbjct: 124 CHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSC---GSPNYAAPE 177
Query: 256 YIETGHLKS--QSDIWSFGVVLYEILTGR 282
I G L + + D+WS G+VLY +L GR
Sbjct: 178 VI-NGKLYAGPEVDVWSCGIVLYVMLVGR 205
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 123/302 (40%), Gaps = 39/302 (12%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQG-HKQWLAEVQFL-GVVSHPNLV 137
+G G FG V + +D VAVK L H+ ++E++ L + H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 138 KLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYL- 196
LLG C+ + G +++ E+ +L L S+ +P+K E + L +L
Sbjct: 95 NLLGACT---KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 151
Query: 197 ------HEGLEI----QVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVV 246
+G+E + I+RD N+LL K+ DFGLAR+
Sbjct: 152 CYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDAR 211
Query: 247 GTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPAD 306
+ APE I QSD+WSFGV+L+EI + + P
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-------------------LGASPYP 252
Query: 307 GKKFSMMIDPRLRNQYSINA----ARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQES 362
G K RL+ + A + + +C P +RPT +++VE L +Q +
Sbjct: 253 GVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 312
Query: 363 EQ 364
Q
Sbjct: 313 AQ 314
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 100/221 (45%), Gaps = 26/221 (11%)
Query: 77 MLKIGEGGFGSVYKGTIR-PLDGRGEPLVVAVKKLNNHGLQG--HKQWLAEVQFLGVVSH 133
M ++GE FG VYKG + P G + VA+K L + +G +++ E + H
Sbjct: 14 MEELGEDRFGKVYKGHLFGPAPGE-QTQAVAIKTLKDKA-EGPLREEFRHEAMLRARLQH 71
Query: 134 PNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRA--------------QPTLPW 179
PN+V LLG + + +++ Y + L + L R+ + L
Sbjct: 72 PNVVCLLGVVTKDQPLS----MIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEP 127
Query: 180 KTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHT 239
+ ++ A G+ YL V+++D T NVL+ K+SD GL RE D+
Sbjct: 128 PDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYY 184
Query: 240 HVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILT 280
+ + + APE I G SDIWS+GVVL+E+ +
Sbjct: 185 KLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 225
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 98/216 (45%), Gaps = 16/216 (7%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQ-WLAEVQFLGVVS 132
+ ++ IGEG +G V R VA+KK++ Q + Q L E+Q L
Sbjct: 45 YTQLQYIGEGAYGMVSSAYDHVRKTR-----VAIKKISPFEHQTYCQRTLREIQILLRFR 99
Query: 133 HPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEG 192
H N++ + ++ + + + + L L S+ L IL G
Sbjct: 100 HENVIGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICYFLYQIL---RG 156
Query: 193 LAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAR-EGPTGDHTHVSTAVVGTYGY 251
L Y+H V++RD K SN+L++ K+ DFGLAR P DHT T V T Y
Sbjct: 157 LKYIHSA---NVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWY 213
Query: 252 AAPEYI--ETGHLKSQSDIWSFGVVLYEILTGRRVL 285
APE + G+ KS DIWS G +L E+L+ R +
Sbjct: 214 RAPEIMLNSKGYTKS-IDIWSVGCILAEMLSNRPIF 248
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 125/285 (43%), Gaps = 33/285 (11%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQ-GHKQWLAEVQFLGVVSHPNLVK 138
IG G V P + VA+K++N Q + L E+Q + HPN+V
Sbjct: 23 IGSGATAVVQAAYCAPKKEK-----VAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVS 77
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLED---RLFSRAQP---TLPWKTRLEIILGAAEG 192
+DE LV + + S+ D + ++ + L T I+ EG
Sbjct: 78 YYTSFVVKDEL----WLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEG 133
Query: 193 LAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTG---DHTHVSTAVVGTY 249
L YLH+ +I +RD K N+LL + +++DFG++ TG V VGT
Sbjct: 134 LEYLHKNGQI---HRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTP 190
Query: 250 GYAAPEYIET--GHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADG 307
+ APE +E G+ ++DIWSFG+ E+ TG + P M+ +L P+
Sbjct: 191 CWMAPEVMEQVRGY-DFKADIWSFGITAIELATGAAPYHK-YPPMKVLMLTLQNDPPSLE 248
Query: 308 KKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVV 352
D + +Y + K+ CL+K+PE+RPT +++
Sbjct: 249 TGVQ---DKEMLKKY----GKSFRKMISLCLQKDPEKRPTAAELL 286
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 127/285 (44%), Gaps = 32/285 (11%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSH 133
+ +KIGEG G V T+R G+ +VAVKK++ Q + EV + H
Sbjct: 153 LDNFIKIGEGSTGIVCIATVR---SSGK--LVAVKKMDLRKQQRRELLFNEVVIMRDYQH 207
Query: 134 PNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGL 193
N+V++ DE + V E++ +L D + + + + L + L
Sbjct: 208 ENVVEMYNSYLVGDELWV----VMEFLEGGALTDIV---THTRMNEEQIAAVCLAVLQAL 260
Query: 194 AYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAA 253
+ LH VI+RD K+ ++LL + + KLSDFG + +VGT + A
Sbjct: 261 SVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQ--VSKEVPRRKXLVGTPYWMA 315
Query: 254 PEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKFSMM 313
PE I + DIWS G+++ E++ G P + L+ +K +
Sbjct: 316 PELISRLPYGPEVDIWSLGIMVIEMVDG------EPPYFNEPPLKAMKMIRDN------- 362
Query: 314 IDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLA 358
+ PRL+N + ++ + + D L ++P +R T ++++ LA
Sbjct: 363 LPPRLKNLHKVSPS--LKGFLDRLLVRDPAQRATAAELLKHPFLA 405
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 131/288 (45%), Gaps = 39/288 (13%)
Query: 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVK 138
++G G FG V G R G+ + VA+K + G +++ E + + +SH LV+
Sbjct: 31 ELGTGQFGVVKYGKWR---GQYD---VAIKMIKE-GSMSEDEFIEEAKVMMNLSHEKLVQ 83
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHE 198
L G C+ + R I ++ EYM N L + L + + LE+ E + YL
Sbjct: 84 LYGVCTKQ--RPI--FIITEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYLES 138
Query: 199 GLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIE 258
Q ++RD N L++ K+SDFGL+R + T S ++ PE +
Sbjct: 139 K---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETS-SVGSKFPVRWSPPEVLM 194
Query: 259 TGHLKSQSDIWSFGVVLYEILT-GRRVLER--NRPTMEQKLLEWVKQFPADGKKFSMMID 315
S+SDIW+FGV+++EI + G+ ER N T E A G + +
Sbjct: 195 YSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEH---------IAQGLR---LYR 242
Query: 316 PRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQESE 363
P L A+ +V + +C + +ERPT ++ ++ L V + E
Sbjct: 243 PHL-------ASEKVYTIMYSCWHEKADERPTFKILLSNI-LDVMDEE 282
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 124/285 (43%), Gaps = 32/285 (11%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSH 133
+ +KIGEG G V T+R G+ +VAVKK++ Q + EV + H
Sbjct: 31 LDNFIKIGEGSTGIVCIATVRS-SGK----LVAVKKMDLRKQQRRELLFNEVVIMRDYQH 85
Query: 134 PNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGL 193
N+V++ DE + V E++ +L D + + + + L + L
Sbjct: 86 ENVVEMYNSYLVGDELWV----VMEFLEGGALTDIV---THTRMNEEQIAAVCLAVLQAL 138
Query: 194 AYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAA 253
+ LH VI+RD K+ ++LL + + KLSDFG + +VGT + A
Sbjct: 139 SVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQ--VSKEVPRRKXLVGTPYWMA 193
Query: 254 PEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKFSMM 313
PE I + DIWS G+++ E++ G P K++ P
Sbjct: 194 PELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIR--DNLP--------- 242
Query: 314 IDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLA 358
PRL+N + ++ + + D L ++P +R T ++++ LA
Sbjct: 243 --PRLKNLHKVSPS--LKGFLDRLLVRDPAQRATAAELLKHPFLA 283
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 125/285 (43%), Gaps = 33/285 (11%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQ-GHKQWLAEVQFLGVVSHPNLVK 138
IG G V P + VA+K++N Q + L E+Q + HPN+V
Sbjct: 18 IGSGATAVVQAAYCAPKKEK-----VAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVS 72
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLED---RLFSRAQ---PTLPWKTRLEIILGAAEG 192
+DE LV + + S+ D + ++ + L T I+ EG
Sbjct: 73 YYTSFVVKDEL----WLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEG 128
Query: 193 LAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTG---DHTHVSTAVVGTY 249
L YLH+ +I +RD K N+LL + +++DFG++ TG V VGT
Sbjct: 129 LEYLHKNGQI---HRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTP 185
Query: 250 GYAAPEYIET--GHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADG 307
+ APE +E G+ ++DIWSFG+ E+ TG + P M+ +L P+
Sbjct: 186 CWMAPEVMEQVRGY-DFKADIWSFGITAIELATGAAPYHK-YPPMKVLMLTLQNDPPSLE 243
Query: 308 KKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVV 352
D + +Y + K+ CL+K+PE+RPT +++
Sbjct: 244 TGVQ---DKEMLKKY----GKSFRKMISLCLQKDPEKRPTAAELL 281
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 129/288 (44%), Gaps = 44/288 (15%)
Query: 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNH-GLQGHKQWLAEVQFLGVVSH-PNL 136
+IG G +GSV K +P G+ ++AVK++ + + KQ L ++ + S P +
Sbjct: 29 EIGRGAYGSVNKMVHKP---SGQ--IMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYI 83
Query: 137 VKLLGYCSTEDERGIQRLLV-------YEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGA 189
V+ G E + I L+ Y+Y ++S +P + +I L
Sbjct: 84 VQFYGALFREGDCWICMELMSTSFDKFYKY---------VYSVLDDVIPEEILGKITLAT 134
Query: 190 AEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTY 249
+ L +L E L+I I+RD K SN+LLD + KL DFG++ G D T G
Sbjct: 135 VKALNHLKENLKI--IHRDIKPSNILLDRSGNIKLCDFGIS--GQLVDSI-AKTRDAGCR 189
Query: 250 GYAAPEYIETGHLKS----QSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPA 305
Y APE I+ + +SD+WS G+ LYE+ TGR + +Q L + VK P
Sbjct: 190 PYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQ-LTQVVKGDP- 247
Query: 306 DGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVE 353
P+L N + + CL K+ +RP ++++
Sbjct: 248 ----------PQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLK 285
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 124/285 (43%), Gaps = 32/285 (11%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSH 133
+ +KIGEG G V T+R G+ +VAVKK++ Q + EV + H
Sbjct: 33 LDNFIKIGEGSTGIVCIATVRS-SGK----LVAVKKMDLRKQQRRELLFNEVVIMRDYQH 87
Query: 134 PNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGL 193
N+V++ DE + V E++ +L D + + + + L + L
Sbjct: 88 ENVVEMYNSYLVGDELWV----VMEFLEGGALTDIV---THTRMNEEQIAAVCLAVLQAL 140
Query: 194 AYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAA 253
+ LH VI+RD K+ ++LL + + KLSDFG + +VGT + A
Sbjct: 141 SVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQ--VSKEVPRRKXLVGTPYWMA 195
Query: 254 PEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKFSMM 313
PE I + DIWS G+++ E++ G P K++ P
Sbjct: 196 PELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIR--DNLP--------- 244
Query: 314 IDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLA 358
PRL+N + ++ + + D L ++P +R T ++++ LA
Sbjct: 245 --PRLKNLHKVSPS--LKGFLDRLLVRDPAQRATAAELLKHPFLA 285
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 100/204 (49%), Gaps = 17/204 (8%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWL-AEVQFLGVVSHPNLVK 138
IG GGF V K L G +VA+K ++ + L + E++ L + H ++ +
Sbjct: 18 IGTGGFAKV-KLACHILTGE----MVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQ 72
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHE 198
L T + + +V EY P L D + S+ + + +TR+ + +AY+H
Sbjct: 73 LYHVLETAN----KIFMVLEYCPGGELFDYIISQDRLSEE-ETRV-VFRQIVSAVAYVHS 126
Query: 199 GLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIE 258
+RD K N+L D K KL DFGL + P G+ + G+ YAAPE I+
Sbjct: 127 Q---GYAHRDLKPENLLFDEYHKLKLIDFGLCAK-PKGNKDYHLQTCCGSLAYAAPELIQ 182
Query: 259 -TGHLKSQSDIWSFGVVLYEILTG 281
+L S++D+WS G++LY ++ G
Sbjct: 183 GKSYLGSEADVWSMGILLYVLMCG 206
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 124/285 (43%), Gaps = 32/285 (11%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSH 133
+ +KIGEG G V T+R G+ +VAVKK++ Q + EV + H
Sbjct: 26 LDNFIKIGEGSTGIVCIATVRS-SGK----LVAVKKMDLRKQQRRELLFNEVVIMRDYQH 80
Query: 134 PNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGL 193
N+V++ DE + V E++ +L D + + + + L + L
Sbjct: 81 ENVVEMYNSYLVGDELWV----VMEFLEGGALTDIV---THTRMNEEQIAAVCLAVLQAL 133
Query: 194 AYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAA 253
+ LH VI+RD K+ ++LL + + KLSDFG + +VGT + A
Sbjct: 134 SVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQ--VSKEVPRRKXLVGTPYWMA 188
Query: 254 PEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKFSMM 313
PE I + DIWS G+++ E++ G P K++ P
Sbjct: 189 PELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIR--DNLP--------- 237
Query: 314 IDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLA 358
PRL+N + ++ + + D L ++P +R T ++++ LA
Sbjct: 238 --PRLKNLHKVSPSLK--GFLDRLLVRDPAQRATAAELLKHPFLA 278
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 124/285 (43%), Gaps = 32/285 (11%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSH 133
+ +KIGEG G V T+R G+ +VAVKK++ Q + EV + H
Sbjct: 22 LDNFIKIGEGSTGIVCIATVRS-SGK----LVAVKKMDLRKQQRRELLFNEVVIMRDYQH 76
Query: 134 PNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGL 193
N+V++ DE + V E++ +L D + + + + L + L
Sbjct: 77 ENVVEMYNSYLVGDELWV----VMEFLEGGALTDIV---THTRMNEEQIAAVCLAVLQAL 129
Query: 194 AYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAA 253
+ LH VI+RD K+ ++LL + + KLSDFG + +VGT + A
Sbjct: 130 SVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQ--VSKEVPRRKXLVGTPYWMA 184
Query: 254 PEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKFSMM 313
PE I + DIWS G+++ E++ G P K++ P
Sbjct: 185 PELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIR--DNLP--------- 233
Query: 314 IDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLA 358
PRL+N + ++ + + D L ++P +R T ++++ LA
Sbjct: 234 --PRLKNLHKVSPSLK--GFLDRLLVRDPAQRATAAELLKHPFLA 274
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 112/217 (51%), Gaps = 30/217 (13%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKL----NNHGLQGHKQWLAEVQFLG 129
+ ++ K+GEG +G VYK D +G +VA+K++ + G+ + E+ L
Sbjct: 23 YQKLEKVGEGTYGVVYKAK----DSQGR--IVALKRIRLDAEDEGIPSTA--IREISLLK 74
Query: 130 VVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIIL-G 188
+ HPN+V L+ +E R + LV+E+M + L+ L T ++++I L
Sbjct: 75 ELHHPNIVSLIDVIHSE--RCLT--LVFEFM-EKDLKKVL--DENKTGLQDSQIKIYLYQ 127
Query: 189 AAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREG--PTGDHTHVSTAVV 246
G+A+ H+ ++++RD K N+L++ + KL+DFGLAR P +TH V
Sbjct: 128 LLRGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTH----EV 180
Query: 247 GTYGYAAPEYIETGHLKSQS-DIWSFGVVLYEILTGR 282
T Y AP+ + S S DIWS G + E++TG+
Sbjct: 181 VTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 127/285 (44%), Gaps = 32/285 (11%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSH 133
+ +KIGEG G V T+R G+ +VAVKK++ Q + EV + H
Sbjct: 76 LDNFIKIGEGSTGIVCIATVRS-SGK----LVAVKKMDLRKQQRRELLFNEVVIMRDYQH 130
Query: 134 PNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGL 193
N+V++ DE + V E++ +L D + + + + L + L
Sbjct: 131 ENVVEMYNSYLVGDELWV----VMEFLEGGALTDIV---THTRMNEEQIAAVCLAVLQAL 183
Query: 194 AYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAA 253
+ LH VI+RD K+ ++LL + + KLSDFG + +VGT + A
Sbjct: 184 SVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQ--VSKEVPRRKXLVGTPYWMA 238
Query: 254 PEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKFSMM 313
PE I + DIWS G+++ E++ G P + L+ +K +
Sbjct: 239 PELISRLPYGPEVDIWSLGIMVIEMVDG------EPPYFNEPPLKAMKMIRDN------- 285
Query: 314 IDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLA 358
+ PRL+N + ++ + + D L ++P +R T ++++ LA
Sbjct: 286 LPPRLKNLHKVSPS--LKGFLDRLLVRDPAQRATAAELLKHPFLA 328
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 112/217 (51%), Gaps = 30/217 (13%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKL----NNHGLQGHKQWLAEVQFLG 129
+ ++ K+GEG +G VYK D +G +VA+K++ + G+ + E+ L
Sbjct: 23 YQKLEKVGEGTYGVVYKAK----DSQGR--IVALKRIRLDAEDEGIPSTA--IREISLLK 74
Query: 130 VVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIIL-G 188
+ HPN+V L+ +E R + LV+E+M + L+ L T ++++I L
Sbjct: 75 ELHHPNIVSLIDVIHSE--RCLT--LVFEFM-EKDLKKVL--DENKTGLQDSQIKIYLYQ 127
Query: 189 AAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREG--PTGDHTHVSTAVV 246
G+A+ H+ ++++RD K N+L++ + KL+DFGLAR P +TH V
Sbjct: 128 LLRGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTH----EV 180
Query: 247 GTYGYAAPEYIETGHLKSQS-DIWSFGVVLYEILTGR 282
T Y AP+ + S S DIWS G + E++TG+
Sbjct: 181 VTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 99/220 (45%), Gaps = 34/220 (15%)
Query: 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNH-GLQGHKQWLAEVQFLGVVSHPNLV 137
++G GGFG V + + GE VA+K+ + ++W E+Q + ++HPN+V
Sbjct: 22 RLGTGGFGYVLRWIHQ---DTGEQ--VAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 76
Query: 138 KLLGYCSTEDERGIQRL-------LVYEYMPNRSLEDRL--FSRAQPTL--PWKTRLEII 186
+ E G+Q+L L EY L L F P +T L I
Sbjct: 77 S-----AREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDI 131
Query: 187 LGAAEGLAYLHEGLEIQVIYRDFKTSNVLLD---GNFKPKLSDFGLAREGPTGDHTHVST 243
A L YLHE ++I+RD K N++L K+ D G A+E G+ + T
Sbjct: 132 SSA---LRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGE---LCT 182
Query: 244 AVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRR 283
VGT Y APE +E D WSFG + +E +TG R
Sbjct: 183 EFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFR 222
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 124/303 (40%), Gaps = 43/303 (14%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQG-HKQWLAEVQFL-GVVSHPNLV 137
+G G FG V + +D VAVK L H+ ++E++ L + H N+V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 138 KLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTR--------LEIILG- 188
LLG C+ + G +++ E+ +L L S+ +P+K LE ++
Sbjct: 97 NLLGACT---KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXY 153
Query: 189 ---AAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAV 245
A+G+ +L + I+RD N+LL K+ DFGLAR+
Sbjct: 154 SFQVAKGMEFLASR---KXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA 210
Query: 246 VGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPA 305
+ APE I QSD+WSFGV+L+EI + + P
Sbjct: 211 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-------------------LGASPY 251
Query: 306 DGKKFSMMIDPRLRNQYSINA----ARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQE 361
G K RL+ + A + + +C P +RPT +++VE L +Q
Sbjct: 252 PGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 311
Query: 362 SEQ 364
+ Q
Sbjct: 312 NAQ 314
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 99/220 (45%), Gaps = 34/220 (15%)
Query: 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNH-GLQGHKQWLAEVQFLGVVSHPNLV 137
++G GGFG V + + GE VA+K+ + ++W E+Q + ++HPN+V
Sbjct: 21 RLGTGGFGYVLRWIHQ---DTGEQ--VAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 75
Query: 138 KLLGYCSTEDERGIQRL-------LVYEYMPNRSLEDRL--FSRAQPTL--PWKTRLEII 186
+ E G+Q+L L EY L L F P +T L I
Sbjct: 76 S-----AREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDI 130
Query: 187 LGAAEGLAYLHEGLEIQVIYRDFKTSNVLLD---GNFKPKLSDFGLAREGPTGDHTHVST 243
A L YLHE ++I+RD K N++L K+ D G A+E G+ + T
Sbjct: 131 SSA---LRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGE---LCT 181
Query: 244 AVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRR 283
VGT Y APE +E D WSFG + +E +TG R
Sbjct: 182 EFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFR 221
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 126/277 (45%), Gaps = 36/277 (12%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL--QGHKQWLA-EVQFLGVVSHPNL 136
+G+G F VY+ + L VA+K ++ + G Q + EV+ + HP++
Sbjct: 19 LGKGSFAGVYRA-----ESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSI 73
Query: 137 VKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYL 196
++L Y ED + LV E N + L +R +P + R + G+ YL
Sbjct: 74 LELYNY--FEDSNYVY--LVLEMCHNGEMNRYLKNRVKPFSENEAR-HFMHQIITGMLYL 128
Query: 197 HEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEY 256
H +++RD SN+LL N K++DFGLA + H + + GT Y +PE
Sbjct: 129 HSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT--LCGTPNYISPEI 183
Query: 257 IETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKFSMMIDP 316
+SD+WS G + Y +L GR + + T++ L + V + D
Sbjct: 184 ATRSAHGLESDVWSLGCMFYTLLIGRPPFDTD--TVKNTLNKVV------------LADY 229
Query: 317 RLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVE 353
+ + SI A + +L L++NP +R +++ V++
Sbjct: 230 EMPSFLSIEAKDLIHQL----LRRNPADRLSLSSVLD 262
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 95/209 (45%), Gaps = 24/209 (11%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL---QGHKQWLAEVQFLGVV-SHPN 135
+G+G FG V+ + + A+K L + + + E + L + HP
Sbjct: 25 LGKGSFGKVFLAEFKKTNQ-----FFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPF 79
Query: 136 LVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRL--EIILGAAEGL 193
L + +C+ + + + V EY+ L + S + L T EIILG L
Sbjct: 80 LTHM--FCTFQTKENL--FFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILG----L 131
Query: 194 AYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAA 253
+LH ++YRD K N+LLD + K++DFG+ +E GD + GT Y A
Sbjct: 132 QFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK--TNXFCGTPDYIA 186
Query: 254 PEYIETGHLKSQSDIWSFGVVLYEILTGR 282
PE + D WSFGV+LYE+L G+
Sbjct: 187 PEILLGQKYNHSVDWWSFGVLLYEMLIGQ 215
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 135/312 (43%), Gaps = 53/312 (16%)
Query: 53 KEKEHHLRVFDMQELREATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNN 112
+E EH R D E+ E ++G+G FG VYK + + A K +
Sbjct: 6 REYEHVRRDLDPNEVWEIVG------ELGDGAFGKVYKAK-----NKETGALAAAKVIET 54
Query: 113 HGLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLE------ 166
+ + ++ E++ L HP +VKLLG + + I + E+ P +++
Sbjct: 55 KSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWI----MIEFCPGGAVDAIMLEL 110
Query: 167 DRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSD 226
DR + Q + + L E L +LH ++I+RD K NVL+ +L+D
Sbjct: 111 DRGLTEPQIQVVCRQML-------EALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLAD 160
Query: 227 FGLAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKS-----QSDIWSFGVVLYEILTG 281
FG++ + S +GT + APE + +K ++DIWS G+ L E+
Sbjct: 161 FGVSAKNLKTLQKRDS--FIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQI 218
Query: 282 RRVLERNRPTMEQKLLEWVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKN 341
P + LL+ K P ++ P +++S+ R K+A L KN
Sbjct: 219 EPPHHELNPM--RVLLKIAKSDP------PTLLTP---SKWSVE-FRDFLKIA---LDKN 263
Query: 342 PEERPTMNQVVE 353
PE RP+ Q++E
Sbjct: 264 PETRPSAAQLLE 275
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 128/284 (45%), Gaps = 54/284 (19%)
Query: 67 LREATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQ 126
LR A++ F + +G+G FG V K LD R A+KK+ H + L+EV
Sbjct: 2 LRYASD-FEEIAVLGQGAFGQVVKAR-NALDSR----YYAIKKIR-HTEEKLSTILSEVM 54
Query: 127 FLGVVSHPNLVKLLGYCSTEDERGIQR-----------LLVYEYMPNRSLEDRLFSR--- 172
L ++H +V+ Y + + R + + EY NR+L D + S
Sbjct: 55 LLASLNHQYVVRY--YAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLN 112
Query: 173 AQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAR- 231
Q W+ +I+ E L+Y+H +I+RD K N+ +D + K+ DFGLA+
Sbjct: 113 QQRDEYWRLFRQIL----EALSYIHSQ---GIIHRDLKPMNIFIDESRNVKIGDFGLAKN 165
Query: 232 ------------EGPTGDHTHVSTAVVGTYGYAAPEYIE-TGHLKSQSDIWSFGVVLYEI 278
+ G ++++A +GT Y A E ++ TGH + D++S G++ +E+
Sbjct: 166 VHRSLDILKLDSQNLPGSSDNLTSA-IGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEM 224
Query: 279 L----TGRRVLERNRPTMEQKLLEWVKQFPADGKKFSMMIDPRL 318
+ TG R + +KL +FP D M ++ ++
Sbjct: 225 IYPFSTGME-----RVNILKKLRSVSIEFPPDFDDNKMKVEKKI 263
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 95/209 (45%), Gaps = 24/209 (11%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL---QGHKQWLAEVQFLGVV-SHPN 135
+G+G FG V+ + + A+K L + + + E + L + HP
Sbjct: 26 LGKGSFGKVFLAEFKKTNQ-----FFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPF 80
Query: 136 LVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRL--EIILGAAEGL 193
L + +C+ + + + V EY+ L + S + L T EIILG L
Sbjct: 81 LTHM--FCTFQTKENL--FFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILG----L 132
Query: 194 AYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAA 253
+LH ++YRD K N+LLD + K++DFG+ +E GD + GT Y A
Sbjct: 133 QFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK--TNEFCGTPDYIA 187
Query: 254 PEYIETGHLKSQSDIWSFGVVLYEILTGR 282
PE + D WSFGV+LYE+L G+
Sbjct: 188 PEILLGQKYNHSVDWWSFGVLLYEMLIGQ 216
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 110/234 (47%), Gaps = 32/234 (13%)
Query: 53 KEKEHHLRVFDMQELREATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNN 112
K+ EH R + ++ E ++G+G FG VYK + ++ A K ++
Sbjct: 24 KQYEHVTRDLNPEDFWEIIG------ELGDGAFGKVYKAQ-----NKETSVLAAAKVIDT 72
Query: 113 HGLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSR 172
+ + ++ E+ L HPN+VKLL E+ I + E+ +++ +
Sbjct: 73 KSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWI----LIEFCAGGAVDAVMLEL 128
Query: 173 AQPTLPWKTRLEIILGAA-EGLAYLHEGLEIQVIYRDFKTSNVL--LDGNFKPKLSDFGL 229
+P +++++++ + L YLH+ ++I+RD K N+L LDG+ KL+DFG+
Sbjct: 129 ERPLT--ESQIQVVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDI--KLADFGV 181
Query: 230 AREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKS-----QSDIWSFGVVLYEI 278
+ + + +GT + APE + K ++D+WS G+ L E+
Sbjct: 182 SAKNTRT--IQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 110/234 (47%), Gaps = 32/234 (13%)
Query: 53 KEKEHHLRVFDMQELREATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNN 112
K+ EH R + ++ E ++G+G FG VYK + ++ A K ++
Sbjct: 24 KQYEHVTRDLNPEDFWEIIG------ELGDGAFGKVYKAQ-----NKETSVLAAAKVIDT 72
Query: 113 HGLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSR 172
+ + ++ E+ L HPN+VKLL E+ I + E+ +++ +
Sbjct: 73 KSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWI----LIEFCAGGAVDAVMLEL 128
Query: 173 AQPTLPWKTRLEIILGAA-EGLAYLHEGLEIQVIYRDFKTSNVL--LDGNFKPKLSDFGL 229
+P +++++++ + L YLH+ ++I+RD K N+L LDG+ KL+DFG+
Sbjct: 129 ERPLT--ESQIQVVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDI--KLADFGV 181
Query: 230 AREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKS-----QSDIWSFGVVLYEI 278
+ + + +GT + APE + K ++D+WS G+ L E+
Sbjct: 182 SAKNTRX--IQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 101/211 (47%), Gaps = 18/211 (8%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHK-QWLAEVQFLGVVS 132
+ ++ K+GEG + +VYKG + D +VA+K++ +G + EV L +
Sbjct: 4 YIKLDKLGEGTYATVYKGKSKLTDN-----LVALKEIRLEHEEGAPCTAIREVSLLKDLK 58
Query: 133 HPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEG 192
H N+V L TE LV+EY+ ++ L+ L +L + G
Sbjct: 59 HANIVTLHDIIHTEKSLT----LVFEYL-DKDLKQYLDDCGNIINMHNVKL-FLFQLLRG 112
Query: 193 LAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYA 252
LAY H +V++RD K N+L++ + KL+DFGLAR T+ + V T Y
Sbjct: 113 LAYCHRQ---KVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVV--TLWYR 167
Query: 253 APE-YIETGHLKSQSDIWSFGVVLYEILTGR 282
P+ + + +Q D+W G + YE+ TGR
Sbjct: 168 PPDILLGSTDYSTQIDMWGVGCIFYEMATGR 198
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 97/216 (44%), Gaps = 16/216 (7%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQ-WLAEVQFLGVVS 132
+ + IGEG +G V + VA+KK++ Q + Q L E++ L
Sbjct: 27 YTNLSYIGEGAYGMVCSAY-----DNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFR 81
Query: 133 HPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEG 192
H N++ + ++ + + + + L L ++ L IL G
Sbjct: 82 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQIL---RG 138
Query: 193 LAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAR-EGPTGDHTHVSTAVVGTYGY 251
L Y+H V++RD K SN+LL+ K+ DFGLAR P DHT T V T Y
Sbjct: 139 LKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 195
Query: 252 AAPEYI--ETGHLKSQSDIWSFGVVLYEILTGRRVL 285
APE + G+ KS DIWS G +L E+L+ R +
Sbjct: 196 RAPEIMLNSKGYTKS-IDIWSVGCILAEMLSNRPIF 230
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 109/234 (46%), Gaps = 32/234 (13%)
Query: 53 KEKEHHLRVFDMQELREATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNN 112
K+ EH R + ++ E ++G+G FG VYK + ++ A K ++
Sbjct: 24 KQYEHVTRDLNPEDFWEIIG------ELGDGAFGKVYKAQ-----NKETSVLAAAKVIDT 72
Query: 113 HGLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSR 172
+ + ++ E+ L HPN+VKLL E+ I + E+ +++ +
Sbjct: 73 KSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWI----LIEFCAGGAVDAVMLEL 128
Query: 173 AQPTLPWKTRLEIILGAA-EGLAYLHEGLEIQVIYRDFKTSNVL--LDGNFKPKLSDFGL 229
+P +++++++ + L YLH+ ++I+RD K N+L LDG+ KL+DFG+
Sbjct: 129 ERPLT--ESQIQVVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDI--KLADFGV 181
Query: 230 AREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKS-----QSDIWSFGVVLYEI 278
+ + +GT + APE + K ++D+WS G+ L E+
Sbjct: 182 SAKNTRX--IQRRDXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 96/211 (45%), Gaps = 15/211 (7%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL-QGHKQWL-AEVQFLGVV 131
+ + IG G +G K R DG+ ++ K+L+ + + KQ L +EV L +
Sbjct: 8 YEVLYTIGTGSYGRCQK-IRRKSDGK----ILVWKELDYGSMTEAEKQMLVSEVNLLREL 62
Query: 132 SHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLF--SRAQPTLPWKTRLEIILGA 189
HPN+V+ Y D +V EY L + ++ + L + L ++
Sbjct: 63 KHPNIVRY--YDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQL 120
Query: 190 AEGLAYLHEGLE--IQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVG 247
L H + V++RD K +NV LDG KL DFGLAR T + A VG
Sbjct: 121 TLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR--ILNHDTSFAKAFVG 178
Query: 248 TYGYAAPEYIETGHLKSQSDIWSFGVVLYEI 278
T Y +PE + +SDIWS G +LYE+
Sbjct: 179 TPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 101/208 (48%), Gaps = 26/208 (12%)
Query: 80 IGE-GGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVK 138
IGE G FG VYK + ++ A K ++ + + ++ E+ L HPN+VK
Sbjct: 17 IGELGDFGKVYKAQ-----NKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVK 71
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAA-EGLAYLH 197
LL E+ I + E+ +++ + +P +++++++ + L YLH
Sbjct: 72 LLDAFYYENNLWI----LIEFCAGGAVDAVMLELERPLT--ESQIQVVCKQTLDALNYLH 125
Query: 198 EGLEIQVIYRDFKTSNVL--LDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPE 255
+ ++I+RD K N+L LDG+ KL+DFG++ + T + +GT + APE
Sbjct: 126 DN---KIIHRDLKAGNILFTLDGDI--KLADFGVSAKN-TRTXIQRRDSFIGTPYWMAPE 179
Query: 256 YIETGHLKS-----QSDIWSFGVVLYEI 278
+ K ++D+WS G+ L E+
Sbjct: 180 VVMCETSKDRPYDYKADVWSLGITLIEM 207
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 129/300 (43%), Gaps = 40/300 (13%)
Query: 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVV--SHPNL 136
+IG+G +G V+ G RGE + V V W E + V H N+
Sbjct: 44 QIGKGRYGEVWMG-----KWRGEKVAVKVFFTTEEA-----SWFRETEIYQTVLMRHENI 93
Query: 137 VKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYL 196
+ + Q L+ +Y N SL D L S TL K+ L++ + GL +L
Sbjct: 94 LGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKS---TTLDAKSMLKLAYSSVSGLCHL 150
Query: 197 H-EGLEIQ----VIYRDFKTSNVLLDGNFKPKLSDFGLARE--GPTGDHTHVSTAVVGTY 249
H E Q + +RD K+ N+L+ N ++D GLA + T + VGT
Sbjct: 151 HTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTK 210
Query: 250 GYAAPEYIETG----HLKS--QSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQF 303
Y PE ++ H +S +D++SFG++L+E+ RR + +E+ L +
Sbjct: 211 RYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEV--ARRCVSGG--IVEEYQLPYHDLV 266
Query: 304 PADGKKFSM-------MIDPRLRNQYSINAA-RRVAKLADNCLKKNPEERPTMNQVVESL 355
P+D M + P N++S + R++ KL C NP R T +V ++L
Sbjct: 267 PSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTL 326
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 142/308 (46%), Gaps = 45/308 (14%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVV--SHPNLV 137
IG+G FG V++G RGE VAVK ++ + + W E + V H N++
Sbjct: 14 IGKGRFGEVWRG-----KWRGEE--VAVKIFSS---REERSWFREAEIYQTVMLRHENIL 63
Query: 138 KLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLH 197
+ + ++ Q LV +Y + SL D L + T+ + +++ L A GLA+LH
Sbjct: 64 GFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL---NRYTVTVEGMIKLALSTASGLAHLH 120
Query: 198 EGLEI-------QVIYRDFKTSNVLLDGNFKPKLSDFGLA-REGPTGDHTHVS-TAVVGT 248
+EI + +RD K+ N+L+ N ++D GLA R D ++ VGT
Sbjct: 121 --MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGT 178
Query: 249 YGYAAPEYIETG----HLKS--QSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQ 302
Y APE ++ H +S ++DI++ G+V +EI RR E L +
Sbjct: 179 KRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI--ARRC--SIGGIHEDYQLPYYDL 234
Query: 303 FPADGKKFSM-------MIDPRLRNQY-SINAARRVAKLADNCLKKNPEERPTMNQVVES 354
P+D M + P + N++ S A R +AK+ C N R T ++ ++
Sbjct: 235 VPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKT 294
Query: 355 L-KLAVQE 361
L +L+ QE
Sbjct: 295 LSQLSQQE 302
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 142/308 (46%), Gaps = 45/308 (14%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVV--SHPNLV 137
IG+G FG V++G RGE VAVK ++ + + W E + V H N++
Sbjct: 12 IGKGRFGEVWRG-----KWRGEE--VAVKIFSS---REERSWFREAEIYQTVMLRHENIL 61
Query: 138 KLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLH 197
+ + ++ Q LV +Y + SL D L + T+ + +++ L A GLA+LH
Sbjct: 62 GFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL---NRYTVTVEGMIKLALSTASGLAHLH 118
Query: 198 EGLEI-------QVIYRDFKTSNVLLDGNFKPKLSDFGLA-REGPTGDHTHVS-TAVVGT 248
+EI + +RD K+ N+L+ N ++D GLA R D ++ VGT
Sbjct: 119 --MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGT 176
Query: 249 YGYAAPEYIETG----HLKS--QSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQ 302
Y APE ++ H +S ++DI++ G+V +EI RR E L +
Sbjct: 177 KRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI--ARRC--SIGGIHEDYQLPYYDL 232
Query: 303 FPADGKKFSM-------MIDPRLRNQY-SINAARRVAKLADNCLKKNPEERPTMNQVVES 354
P+D M + P + N++ S A R +AK+ C N R T ++ ++
Sbjct: 233 VPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKT 292
Query: 355 L-KLAVQE 361
L +L+ QE
Sbjct: 293 LSQLSQQE 300
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 142/308 (46%), Gaps = 45/308 (14%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVV--SHPNLV 137
IG+G FG V++G RGE VAVK ++ + + W E + V H N++
Sbjct: 37 IGKGRFGEVWRG-----KWRGEE--VAVKIFSS---REERSWFREAEIYQTVMLRHENIL 86
Query: 138 KLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLH 197
+ + ++ Q LV +Y + SL D L + T+ + +++ L A GLA+LH
Sbjct: 87 GFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL---NRYTVTVEGMIKLALSTASGLAHLH 143
Query: 198 EGLEI-------QVIYRDFKTSNVLLDGNFKPKLSDFGLA-REGPTGDHTHVS-TAVVGT 248
+EI + +RD K+ N+L+ N ++D GLA R D ++ VGT
Sbjct: 144 --MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGT 201
Query: 249 YGYAAPEYIETG----HLKS--QSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQ 302
Y APE ++ H +S ++DI++ G+V +EI RR E L +
Sbjct: 202 KRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI--ARRC--SIGGIHEDYQLPYYDL 257
Query: 303 FPADGKKFSM-------MIDPRLRNQY-SINAARRVAKLADNCLKKNPEERPTMNQVVES 354
P+D M + P + N++ S A R +AK+ C N R T ++ ++
Sbjct: 258 VPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKT 317
Query: 355 L-KLAVQE 361
L +L+ QE
Sbjct: 318 LSQLSQQE 325
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 142/308 (46%), Gaps = 45/308 (14%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVV--SHPNLV 137
IG+G FG V++G RGE VAVK ++ + + W E + V H N++
Sbjct: 17 IGKGRFGEVWRG-----KWRGEE--VAVKIFSS---REERSWFREAEIYQTVMLRHENIL 66
Query: 138 KLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLH 197
+ + ++ Q LV +Y + SL D L + T+ + +++ L A GLA+LH
Sbjct: 67 GFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL---NRYTVTVEGMIKLALSTASGLAHLH 123
Query: 198 EGLEI-------QVIYRDFKTSNVLLDGNFKPKLSDFGLA-REGPTGDHTHVS-TAVVGT 248
+EI + +RD K+ N+L+ N ++D GLA R D ++ VGT
Sbjct: 124 --MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGT 181
Query: 249 YGYAAPEYIETG----HLKS--QSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQ 302
Y APE ++ H +S ++DI++ G+V +EI RR E L +
Sbjct: 182 KRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI--ARRC--SIGGIHEDYQLPYYDL 237
Query: 303 FPADGKKFSM-------MIDPRLRNQY-SINAARRVAKLADNCLKKNPEERPTMNQVVES 354
P+D M + P + N++ S A R +AK+ C N R T ++ ++
Sbjct: 238 VPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKT 297
Query: 355 L-KLAVQE 361
L +L+ QE
Sbjct: 298 LSQLSQQE 305
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 99/215 (46%), Gaps = 15/215 (6%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSH 133
RML G+G FGSV + ++ DG + V + K + +++L E + H
Sbjct: 27 LGRML--GKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDH 84
Query: 134 PNLVKLLGYCSTEDERGIQRL----LVYEYMPNRSLEDRLFSR---AQP-TLPWKTRLEI 185
P++ KL+G +G RL ++ +M + L L + P LP +T +
Sbjct: 85 PHVAKLVGVSLRSRAKG--RLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRF 142
Query: 186 ILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAV 245
++ A G+ YL I+RD N +L + ++DFGL+R+ +GD+ A
Sbjct: 143 MVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCAS 199
Query: 246 VGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILT 280
+ A E + SD+W+FGV ++EI+T
Sbjct: 200 KLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMT 234
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 142/308 (46%), Gaps = 45/308 (14%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVV--SHPNLV 137
IG+G FG V++G RGE VAVK ++ + + W E + V H N++
Sbjct: 50 IGKGRFGEVWRGK-----WRGEE--VAVKIFSS---REERSWFREAEIYQTVMLRHENIL 99
Query: 138 KLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLH 197
+ + ++ Q LV +Y + SL D L + T+ + +++ L A GLA+LH
Sbjct: 100 GFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL---NRYTVTVEGMIKLALSTASGLAHLH 156
Query: 198 EGLEI-------QVIYRDFKTSNVLLDGNFKPKLSDFGLA-REGPTGDHTHVS-TAVVGT 248
+EI + +RD K+ N+L+ N ++D GLA R D ++ VGT
Sbjct: 157 --MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGT 214
Query: 249 YGYAAPEYIETG----HLKS--QSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQ 302
Y APE ++ H +S ++DI++ G+V +EI RR E L +
Sbjct: 215 KRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI--ARRC--SIGGIHEDYQLPYYDL 270
Query: 303 FPADGKKFSM-------MIDPRLRNQY-SINAARRVAKLADNCLKKNPEERPTMNQVVES 354
P+D M + P + N++ S A R +AK+ C N R T ++ ++
Sbjct: 271 VPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKT 330
Query: 355 L-KLAVQE 361
L +L+ QE
Sbjct: 331 LSQLSQQE 338
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 142/308 (46%), Gaps = 45/308 (14%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVV--SHPNLV 137
IG+G FG V++G RGE VAVK ++ + + W E + V H N++
Sbjct: 11 IGKGRFGEVWRGK-----WRGEE--VAVKIFSS---REERSWFREAEIYQTVMLRHENIL 60
Query: 138 KLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLH 197
+ + ++ Q LV +Y + SL D L + T+ + +++ L A GLA+LH
Sbjct: 61 GFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL---NRYTVTVEGMIKLALSTASGLAHLH 117
Query: 198 EGLEI-------QVIYRDFKTSNVLLDGNFKPKLSDFGLA-REGPTGDHTHVS-TAVVGT 248
+EI + +RD K+ N+L+ N ++D GLA R D ++ VGT
Sbjct: 118 --MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGT 175
Query: 249 YGYAAPEYIETG----HLKS--QSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQ 302
Y APE ++ H +S ++DI++ G+V +EI RR E L +
Sbjct: 176 KRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI--ARRC--SIGGIHEDYQLPYYDL 231
Query: 303 FPADGKKFSM-------MIDPRLRNQY-SINAARRVAKLADNCLKKNPEERPTMNQVVES 354
P+D M + P + N++ S A R +AK+ C N R T ++ ++
Sbjct: 232 VPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKT 291
Query: 355 L-KLAVQE 361
L +L+ QE
Sbjct: 292 LSQLSQQE 299
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 97/216 (44%), Gaps = 16/216 (7%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQ-WLAEVQFLGVVS 132
+ + IGEG +G V + VA+KK++ Q + Q L E++ L
Sbjct: 27 YTNLSYIGEGAYGMVCSAY-----DNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFR 81
Query: 133 HPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEG 192
H N++ + ++ + + + + L L ++ L IL G
Sbjct: 82 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQIL---RG 138
Query: 193 LAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAR-EGPTGDHTHVSTAVVGTYGY 251
L Y+H V++RD K SN+LL+ K+ DFGLAR P DHT T V T Y
Sbjct: 139 LKYIHSA---NVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWY 195
Query: 252 AAPEYI--ETGHLKSQSDIWSFGVVLYEILTGRRVL 285
APE + G+ KS DIWS G +L E+L+ R +
Sbjct: 196 RAPEIMLNSKGYTKS-IDIWSVGCILAEMLSNRPIF 230
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 98/207 (47%), Gaps = 18/207 (8%)
Query: 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKL---NNHGLQGHKQWLAEVQFLGVVSHPN 135
K+G GG +VY L+ + VA+K + + K++ EV +SH N
Sbjct: 18 KLGGGGMSTVYLAEDTILNIK-----VAIKAIFIPPREKEETLKRFEREVHNSSQLSHQN 72
Query: 136 LVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAY 195
+V ++ DE LV EY+ +L + + S L T + +G+ +
Sbjct: 73 IVSMIDV----DEEDDCYYLVMEYIEGPTLSEYIESHGP--LSVDTAINFTNQILDGIKH 126
Query: 196 LHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPE 255
H+ +++++RD K N+L+D N K+ DFG+A+ T + V+GT Y +PE
Sbjct: 127 AHD---MRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQ-TNHVLGTVQYFSPE 182
Query: 256 YIETGHLKSQSDIWSFGVVLYEILTGR 282
+ +DI+S G+VLYE+L G
Sbjct: 183 QAKGEATDECTDIYSIGIVLYEMLVGE 209
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 114/252 (45%), Gaps = 39/252 (15%)
Query: 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNN--HGLQGHKQWLAEVQFLGVVS-HPN 135
K+G+G +G V+K R GE VVAVKK+ + ++ E+ L +S H N
Sbjct: 16 KLGKGAYGIVWKSIDR---RTGE--VVAVKKIFDAFQNSTDAQRTFREIMILTELSGHEN 70
Query: 136 LVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAY 195
+V LL +++R + LV++YM + RA P + ++ + + Y
Sbjct: 71 IVNLLNVLRADNDRDV--YLVFDYMET---DLHAVIRANILEPVHKQY-VVYQLIKVIKY 124
Query: 196 LHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPT-------------------G 236
LH G +++RD K SN+LL+ K++DFGL+R
Sbjct: 125 LHSG---GLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFD 181
Query: 237 DHTHVSTAVVGTYGYAAPEYI--ETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQ 294
D + T V T Y APE + T + K D+WS G +L EIL G+ + + +
Sbjct: 182 DDQPILTDYVATRWYRAPEILLGSTKYTKG-IDMWSLGCILGEILCGKPIFPGSSTMNQL 240
Query: 295 KLLEWVKQFPAD 306
+ + V FP++
Sbjct: 241 ERIIGVIDFPSN 252
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 102/215 (47%), Gaps = 23/215 (10%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLN------NHGLQGHKQWLAEVQF 127
F + +G+GG+G V++ +R + G + A+K L N H + AE
Sbjct: 19 FELLRVLGKGGYGKVFQ--VRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTK--AERNI 74
Query: 128 LGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIIL 187
L V HP +V L+ T G + L+ EY+ L +L + T +
Sbjct: 75 LEEVKHPFIVDLIYAFQT----GGKLYLILEYLSGGELFMQL--EREGIFMEDTACFYLA 128
Query: 188 GAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVG 247
+ L +LH+ +IYRD K N++L+ KL+DFGL +E D T V+ G
Sbjct: 129 EISMALGHLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLCKES-IHDGT-VTHTFCG 183
Query: 248 TYGYAAPEYI-ETGHLKSQSDIWSFGVVLYEILTG 281
T Y APE + +GH ++ D WS G ++Y++LTG
Sbjct: 184 TIEYMAPEILMRSGHNRA-VDWWSLGALMYDMLTG 217
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 133/309 (43%), Gaps = 53/309 (17%)
Query: 56 EHHLRVFDMQELREATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL 115
EH R D E+ E ++G+G FG VYK + + A K +
Sbjct: 1 EHVRRDLDPNEVWEIVG------ELGDGAFGKVYKAK-----NKETGALAAAKVIETKSE 49
Query: 116 QGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLE------DRL 169
+ + ++ E++ L HP +VKLLG + + I + E+ P +++ DR
Sbjct: 50 EELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWI----MIEFCPGGAVDAIMLELDRG 105
Query: 170 FSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGL 229
+ Q + + L E L +LH ++I+RD K NVL+ +L+DFG+
Sbjct: 106 LTEPQIQVVCRQML-------EALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGV 155
Query: 230 AREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKS-----QSDIWSFGVVLYEILTGRRV 284
+ + S +GT + APE + +K ++DIWS G+ L E+
Sbjct: 156 SAKNLKTLQKRDS--FIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPP 213
Query: 285 LERNRPTMEQKLLEWVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEE 344
P + LL+ K P ++ P +++S+ R K+A L KNPE
Sbjct: 214 HHELNPM--RVLLKIAKSDP------PTLLTP---SKWSVE-FRDFLKIA---LDKNPET 258
Query: 345 RPTMNQVVE 353
RP+ Q++E
Sbjct: 259 RPSAAQLLE 267
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 129/288 (44%), Gaps = 36/288 (12%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLD-GRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVS 132
+ R KIG+G G+VY +D G+ VA++++N + + E+ +
Sbjct: 22 YTRFEKIGQGASGTVYTA----MDVATGQE--VAIRQMNLQQQPKKELIINEILVMRENK 75
Query: 133 HPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEG 192
+PN+V L DE + V EY+ SL D + + + + +
Sbjct: 76 NPNIVNYLDSYLVGDELWV----VMEYLAGGSLTDVV---TETCMDEGQIAAVCRECLQA 128
Query: 193 LAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYA 252
L +LH QVI+RD K+ N+LL + KL+DFG + T + + ST +VGT +
Sbjct: 129 LEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQ-ITPEQSKRST-MVGTPYWM 183
Query: 253 APEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKFSM 312
APE + + DIWS G++ E++ G P + + L + +G
Sbjct: 184 APEVVTRKAYGPKVDIWSLGIMAIEMIEGE------PPYLNENPLRALYLIATNGT---- 233
Query: 313 MIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVES--LKLA 358
P L+N ++A R + CL + E+R + ++++ LK+A
Sbjct: 234 ---PELQNPEKLSAIFR--DFLNRCLDMDVEKRGSAKELLQHQFLKIA 276
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 102/215 (47%), Gaps = 23/215 (10%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLN------NHGLQGHKQWLAEVQF 127
F + +G+GG+G V++ +R + G + A+K L N H + AE
Sbjct: 19 FELLRVLGKGGYGKVFQ--VRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTK--AERNI 74
Query: 128 LGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIIL 187
L V HP +V L+ T G + L+ EY+ L +L + T +
Sbjct: 75 LEEVKHPFIVDLIYAFQT----GGKLYLILEYLSGGELFMQL--EREGIFMEDTACFYLA 128
Query: 188 GAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVG 247
+ L +LH+ +IYRD K N++L+ KL+DFGL +E D T V+ G
Sbjct: 129 EISMALGHLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLCKES-IHDGT-VTHXFCG 183
Query: 248 TYGYAAPEYI-ETGHLKSQSDIWSFGVVLYEILTG 281
T Y APE + +GH ++ D WS G ++Y++LTG
Sbjct: 184 TIEYMAPEILMRSGHNRA-VDWWSLGALMYDMLTG 217
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 127/281 (45%), Gaps = 39/281 (13%)
Query: 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQ-GHKQWLAEVQFLGVVSHPNLV 137
K+G G FG V+ ++ R L +K +N Q +Q AE++ L + HPN++
Sbjct: 29 KLGSGAFGDVHL-----VEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNII 83
Query: 138 KLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQP---TLPWKTRLEIILGAAEGLA 194
K+ + ED + +V E L +R+ S AQ L E++ LA
Sbjct: 84 KI--FEVFEDYHNM--YIVMETCEGGELLERIVS-AQARGKALSEGYVAELMKQMMNALA 138
Query: 195 YLHEGLEIQVIYRDFKTSNVLLDGN--FKP-KLSDFGLAREGPTGDHTHVSTAVVGTYGY 251
Y H V+++D K N+L P K+ DFGLA + +H ST GT Y
Sbjct: 139 YFHSQ---HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEH---STNAAGTALY 192
Query: 252 AAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKFS 311
APE + + + DIWS GVV+Y +LTG LE V+Q A K+ +
Sbjct: 193 MAPEVFKRD-VTFKCDIWSAGVVMYFLLTGCLPFTGTS-------LEEVQQ-KATYKEPN 243
Query: 312 MMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVV 352
++ R +++ +++ L K+PE RP+ QV+
Sbjct: 244 YAVECRPLTPQAVDLLKQM-------LTKDPERRPSAAQVL 277
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 137/320 (42%), Gaps = 71/320 (22%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGV--VSHPNLV 137
IG G +G+VYKG+ LD R P+ V V N + ++ E V + H N+
Sbjct: 21 IGRGRYGAVYKGS---LDER--PVAVKVFSFAN-----RQNFINEKNIYRVPLMEHDNIA 70
Query: 138 KLLGYCSTEDER-----GIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEG 192
+ + DER ++ LLV EY PN SL L + T W + + G
Sbjct: 71 RFI----VGDERVTADGRMEYLLVMEYYPNGSLXKYL---SLHTSDWVSSCRLAHSVTRG 123
Query: 193 LAYLHEGL------EIQVIYRDFKTSNVLLDGNFKPKLSDFGLA------REGPTGDHTH 240
LAYLH L + + +RD + NVL+ + +SDFGL+ R G+ +
Sbjct: 124 LAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDN 183
Query: 241 VSTAVVGTYGYAAPEYIETG-HLKS------QSDIWSFGVVLYEILT-------GRRVLE 286
+ + VGT Y APE +E +L+ Q D+++ G++ +EI G V E
Sbjct: 184 AAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPE 243
Query: 287 R---------NRPTME--QKLLEWVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLAD 335
N PT E Q L+ KQ P KF P + S+ A R + + +
Sbjct: 244 YQMAFQTEVGNHPTFEDMQVLVSREKQRP----KF-----PEAWKENSL-AVRSLKETIE 293
Query: 336 NCLKKNPEERPTMNQVVESL 355
+C ++ E R T E +
Sbjct: 294 DCWDQDAEARLTAQXAEERM 313
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 97/216 (44%), Gaps = 16/216 (7%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQ-WLAEVQFLGVVS 132
+ + IGEG +G V + VA+KK++ Q + Q L E++ L
Sbjct: 25 YTNLSYIGEGAYGMVCSAY-----DNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR 79
Query: 133 HPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEG 192
H N++ + ++ + + + + L L ++ L IL G
Sbjct: 80 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQIL---RG 136
Query: 193 LAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREG-PTGDHTHVSTAVVGTYGY 251
L Y+H V++RD K SN+LL+ K+ DFGLAR P DHT T V T Y
Sbjct: 137 LKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 193
Query: 252 AAPEYI--ETGHLKSQSDIWSFGVVLYEILTGRRVL 285
APE + G+ KS DIWS G +L E+L+ R +
Sbjct: 194 RAPEIMLNSKGYTKS-IDIWSVGCILAEMLSNRPIF 228
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 97/216 (44%), Gaps = 16/216 (7%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQ-WLAEVQFLGVVS 132
+ + IGEG +G V + VA+KK++ Q + Q L E++ L
Sbjct: 27 YTNLSYIGEGAYGMVCSAY-----DNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR 81
Query: 133 HPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEG 192
H N++ + ++ + + + + L L ++ L IL G
Sbjct: 82 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQIL---RG 138
Query: 193 LAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREG-PTGDHTHVSTAVVGTYGY 251
L Y+H V++RD K SN+LL+ K+ DFGLAR P DHT T V T Y
Sbjct: 139 LKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 195
Query: 252 AAPEYI--ETGHLKSQSDIWSFGVVLYEILTGRRVL 285
APE + G+ KS DIWS G +L E+L+ R +
Sbjct: 196 RAPEIMLNSKGYTKS-IDIWSVGCILAEMLSNRPIF 230
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 95/229 (41%), Gaps = 21/229 (9%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL---QGHKQWLAEVQ-FLG 129
F+ + IG+G FG V + E + AVK L + + K ++E L
Sbjct: 40 FHFLKVIGKGSFGKVLLAR-----HKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLK 94
Query: 130 VVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGA 189
V HP LV L T D + V +Y+ L L R + L + R
Sbjct: 95 NVKHPFLVGLHFSFQTAD----KLYFVLDYINGGELFYHL-QRERCFLEPRARF-YAAEI 148
Query: 190 AEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTY 249
A L YLH + ++YRD K N+LLD L+DFGL +E +H ++ GT
Sbjct: 149 ASALGYLHS---LNIVYRDLKPENILLDSQGHIVLTDFGLCKE--NIEHNSTTSTFCGTP 203
Query: 250 GYAAPEYIETGHLKSQSDIWSFGVVLYEILTGR-RVLERNRPTMEQKLL 297
Y APE + D W G VLYE+L G RN M +L
Sbjct: 204 EYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNIL 252
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 83/168 (49%), Gaps = 21/168 (12%)
Query: 122 LAEVQFLGVVS-HPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWK 180
L EV L VS HPN+++L E LV++ M L D L + TL K
Sbjct: 71 LKEVDILRKVSGHPNIIQL----KDTYETNTFFFLVFDLMKKGELFDYLTEKV--TLSEK 124
Query: 181 TRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTH 240
+I+ E + LH+ + +++RD K N+LLD + KL+DFG + + G+
Sbjct: 125 ETRKIMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLR 181
Query: 241 VSTAVVGTYGYAAPEYIET-------GHLKSQSDIWSFGVVLYEILTG 281
+V GT Y APE IE G+ K + D+WS GV++Y +L G
Sbjct: 182 ---SVCGTPSYLAPEIIECSMNDNHPGYGK-EVDMWSTGVIMYTLLAG 225
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 97/216 (44%), Gaps = 16/216 (7%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQ-WLAEVQFLGVVS 132
+ + IGEG +G V + VA+KK++ Q + Q L E++ L
Sbjct: 33 YTNLSYIGEGAYGMVCSAY-----DNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR 87
Query: 133 HPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEG 192
H N++ + ++ + + + + L L ++ L IL G
Sbjct: 88 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQIL---RG 144
Query: 193 LAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAR-EGPTGDHTHVSTAVVGTYGY 251
L Y+H V++RD K SN+LL+ K+ DFGLAR P DHT T V T Y
Sbjct: 145 LKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 201
Query: 252 AAPEYI--ETGHLKSQSDIWSFGVVLYEILTGRRVL 285
APE + G+ KS DIWS G +L E+L+ R +
Sbjct: 202 RAPEIMLNSKGYTKS-IDIWSVGCILAEMLSNRPIF 236
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 97/216 (44%), Gaps = 16/216 (7%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQ-WLAEVQFLGVVS 132
+ + IGEG +G V + VA+KK++ Q + Q L E++ L
Sbjct: 25 YTNLSYIGEGAYGMVCSAY-----DNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR 79
Query: 133 HPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEG 192
H N++ + ++ + + + + L L ++ L IL G
Sbjct: 80 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQIL---RG 136
Query: 193 LAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAR-EGPTGDHTHVSTAVVGTYGY 251
L Y+H V++RD K SN+LL+ K+ DFGLAR P DHT T V T Y
Sbjct: 137 LKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 193
Query: 252 AAPEYI--ETGHLKSQSDIWSFGVVLYEILTGRRVL 285
APE + G+ KS DIWS G +L E+L+ R +
Sbjct: 194 RAPEIMLNSKGYTKS-IDIWSVGCILAEMLSNRPIF 228
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 97/216 (44%), Gaps = 16/216 (7%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQ-WLAEVQFLGVVS 132
+ + IGEG +G V + VA+KK++ Q + Q L E++ L
Sbjct: 29 YTNLSYIGEGAYGMVCSAY-----DNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFR 83
Query: 133 HPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEG 192
H N++ + ++ + + + + L L ++ L IL G
Sbjct: 84 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQIL---RG 140
Query: 193 LAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAR-EGPTGDHTHVSTAVVGTYGY 251
L Y+H V++RD K SN+LL+ K+ DFGLAR P DHT T V T Y
Sbjct: 141 LKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWY 197
Query: 252 AAPEYI--ETGHLKSQSDIWSFGVVLYEILTGRRVL 285
APE + G+ KS DIWS G +L E+L+ R +
Sbjct: 198 RAPEIMLNSKGYTKS-IDIWSVGCILAEMLSNRPIF 232
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 97/216 (44%), Gaps = 16/216 (7%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQ-WLAEVQFLGVVS 132
+ + IGEG +G V + VA+KK++ Q + Q L E++ L
Sbjct: 25 YTNLSYIGEGAYGMVCSAY-----DNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR 79
Query: 133 HPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEG 192
H N++ + ++ + + + + L L ++ L IL G
Sbjct: 80 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQIL---RG 136
Query: 193 LAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAR-EGPTGDHTHVSTAVVGTYGY 251
L Y+H V++RD K SN+LL+ K+ DFGLAR P DHT T V T Y
Sbjct: 137 LKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWY 193
Query: 252 AAPEYI--ETGHLKSQSDIWSFGVVLYEILTGRRVL 285
APE + G+ KS DIWS G +L E+L+ R +
Sbjct: 194 RAPEIMLNSKGYTKS-IDIWSVGCILAEMLSNRPIF 228
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 97/216 (44%), Gaps = 16/216 (7%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQ-WLAEVQFLGVVS 132
+ + IGEG +G V + VA+KK++ Q + Q L E++ L
Sbjct: 23 YTNLSYIGEGAYGMVCSAY-----DNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR 77
Query: 133 HPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEG 192
H N++ + ++ + + + + L L ++ L IL G
Sbjct: 78 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQIL---RG 134
Query: 193 LAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAR-EGPTGDHTHVSTAVVGTYGY 251
L Y+H V++RD K SN+LL+ K+ DFGLAR P DHT T V T Y
Sbjct: 135 LKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 191
Query: 252 AAPEYI--ETGHLKSQSDIWSFGVVLYEILTGRRVL 285
APE + G+ KS DIWS G +L E+L+ R +
Sbjct: 192 RAPEIMLNSKGYTKS-IDIWSVGCILAEMLSNRPIF 226
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 92/205 (44%), Gaps = 21/205 (10%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQG-HKQWLAEVQFLGVVSHPNLVK 138
IGEG FG V++G + + VA+K N +++L E + HP++VK
Sbjct: 398 IGEGQFGDVHQGIY--MSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 455
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRS-LEDRLFSRAQPTLPWKTRLEIILGA---AEGLA 194
L+G + I L + RS L+ R FS +L IL A + LA
Sbjct: 456 LIGVITENPVWIIMELCTLGEL--RSFLQVRKFSLDLASL--------ILYAYQLSTALA 505
Query: 195 YLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAP 254
YL + ++RD NVL+ N KL DFGL+R + S + + AP
Sbjct: 506 YLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI-KWMAP 561
Query: 255 EYIETGHLKSQSDIWSFGVVLYEIL 279
E I S SD+W FGV ++EIL
Sbjct: 562 ESINFRRFTSASDVWMFGVCMWEIL 586
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 94/210 (44%), Gaps = 31/210 (14%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQG-HKQWLAEVQFLGVVSHPNLVK 138
IGEG FG V++G + + VA+K N +++L E + HP++VK
Sbjct: 18 IGEGQFGDVHQGIY--MSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 75
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRS-LEDRLFSRAQPTLPWKTRLEIILGA---AEGLA 194
L+G + I L + RS L+ R FS +L IL A + LA
Sbjct: 76 LIGVITENPVWIIMELCTLGEL--RSFLQVRKFSLDLASL--------ILYAYQLSTALA 125
Query: 195 YLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYG---- 250
YL + ++RD NVL+ N KL DFGL+R + ST + G
Sbjct: 126 YLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSR------YMEDSTXXKASKGKLPI 176
Query: 251 -YAAPEYIETGHLKSQSDIWSFGVVLYEIL 279
+ APE I S SD+W FGV ++EIL
Sbjct: 177 KWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 97/216 (44%), Gaps = 16/216 (7%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQ-WLAEVQFLGVVS 132
+ + IGEG +G V + VA+KK++ Q + Q L E++ L
Sbjct: 23 YTNLSYIGEGAYGMVCSAY-----DNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR 77
Query: 133 HPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEG 192
H N++ + ++ + + + + L L ++ L IL G
Sbjct: 78 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQIL---RG 134
Query: 193 LAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREG-PTGDHTHVSTAVVGTYGY 251
L Y+H V++RD K SN+LL+ K+ DFGLAR P DHT T V T Y
Sbjct: 135 LKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 191
Query: 252 AAPEYI--ETGHLKSQSDIWSFGVVLYEILTGRRVL 285
APE + G+ KS DIWS G +L E+L+ R +
Sbjct: 192 RAPEIMLNSKGYTKS-IDIWSVGCILAEMLSNRPIF 226
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 97/216 (44%), Gaps = 16/216 (7%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQ-WLAEVQFLGVVS 132
+ + IGEG +G V + VA+KK++ Q + Q L E++ L
Sbjct: 25 YTNLSYIGEGAYGMVCSAY-----DNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR 79
Query: 133 HPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEG 192
H N++ + ++ + + + + L L ++ L IL G
Sbjct: 80 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQIL---RG 136
Query: 193 LAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAR-EGPTGDHTHVSTAVVGTYGY 251
L Y+H V++RD K SN+LL+ K+ DFGLAR P DHT T V T Y
Sbjct: 137 LKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWY 193
Query: 252 AAPEYI--ETGHLKSQSDIWSFGVVLYEILTGRRVL 285
APE + G+ KS DIWS G +L E+L+ R +
Sbjct: 194 RAPEIMLNSKGYTKS-IDIWSVGCILAEMLSNRPIF 228
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 97/216 (44%), Gaps = 16/216 (7%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQ-WLAEVQFLGVVS 132
+ + IGEG +G V + VA+KK++ Q + Q L E++ L
Sbjct: 30 YTNLSYIGEGAYGMVCSAY-----DNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR 84
Query: 133 HPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEG 192
H N++ + ++ + + + + L L ++ L IL G
Sbjct: 85 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQIL---RG 141
Query: 193 LAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAR-EGPTGDHTHVSTAVVGTYGY 251
L Y+H V++RD K SN+LL+ K+ DFGLAR P DHT T V T Y
Sbjct: 142 LKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 198
Query: 252 AAPEYI--ETGHLKSQSDIWSFGVVLYEILTGRRVL 285
APE + G+ KS DIWS G +L E+L+ R +
Sbjct: 199 RAPEIMLNSKGYTKS-IDIWSVGCILAEMLSNRPIF 233
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 97/216 (44%), Gaps = 16/216 (7%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQ-WLAEVQFLGVVS 132
+ + IGEG +G V + VA+KK++ Q + Q L E++ L
Sbjct: 31 YTNLSYIGEGAYGMVCSAY-----DNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR 85
Query: 133 HPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEG 192
H N++ + ++ + + + + L L ++ L IL G
Sbjct: 86 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQIL---RG 142
Query: 193 LAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAR-EGPTGDHTHVSTAVVGTYGY 251
L Y+H V++RD K SN+LL+ K+ DFGLAR P DHT T V T Y
Sbjct: 143 LKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 199
Query: 252 AAPEYI--ETGHLKSQSDIWSFGVVLYEILTGRRVL 285
APE + G+ KS DIWS G +L E+L+ R +
Sbjct: 200 RAPEIMLNSKGYTKS-IDIWSVGCILAEMLSNRPIF 234
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 97/216 (44%), Gaps = 16/216 (7%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQ-WLAEVQFLGVVS 132
+ + IGEG +G V + VA+KK++ Q + Q L E++ L
Sbjct: 22 YTNLSYIGEGAYGMVCSAY-----DNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR 76
Query: 133 HPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEG 192
H N++ + ++ + + + + L L ++ L IL G
Sbjct: 77 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQIL---RG 133
Query: 193 LAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAR-EGPTGDHTHVSTAVVGTYGY 251
L Y+H V++RD K SN+LL+ K+ DFGLAR P DHT T V T Y
Sbjct: 134 LKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 190
Query: 252 AAPEYI--ETGHLKSQSDIWSFGVVLYEILTGRRVL 285
APE + G+ KS DIWS G +L E+L+ R +
Sbjct: 191 RAPEIMLNSKGYTKS-IDIWSVGCILAEMLSNRPIF 225
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 97/216 (44%), Gaps = 16/216 (7%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQ-WLAEVQFLGVVS 132
+ + IGEG +G V + VA+KK++ Q + Q L E++ L
Sbjct: 29 YTNLSYIGEGAYGMVCSAY-----DNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR 83
Query: 133 HPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEG 192
H N++ + ++ + + + + L L ++ L IL G
Sbjct: 84 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQIL---RG 140
Query: 193 LAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAR-EGPTGDHTHVSTAVVGTYGY 251
L Y+H V++RD K SN+LL+ K+ DFGLAR P DHT T V T Y
Sbjct: 141 LKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 197
Query: 252 AAPEYI--ETGHLKSQSDIWSFGVVLYEILTGRRVL 285
APE + G+ KS DIWS G +L E+L+ R +
Sbjct: 198 RAPEIMLNSKGYTKS-IDIWSVGCILAEMLSNRPIF 232
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 129/288 (44%), Gaps = 36/288 (12%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLD-GRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVS 132
+ R KIG+G G+VY +D G+ VA++++N + + E+ +
Sbjct: 23 YTRFEKIGQGASGTVYTA----MDVATGQE--VAIRQMNLQQQPKKELIINEILVMRENK 76
Query: 133 HPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEG 192
+PN+V L DE + V EY+ SL D + + + + +
Sbjct: 77 NPNIVNYLDSYLVGDELWV----VMEYLAGGSLTDVV---TETCMDEGQIAAVCRECLQA 129
Query: 193 LAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYA 252
L +LH QVI+RD K+ N+LL + KL+DFG + T + + S +VGT +
Sbjct: 130 LEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQ-ITPEQSKRSX-MVGTPYWM 184
Query: 253 APEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKFSM 312
APE + + DIWS G++ E++ G P + + L + +G
Sbjct: 185 APEVVTRKAYGPKVDIWSLGIMAIEMIEGE------PPYLNENPLRALYLIATNGT---- 234
Query: 313 MIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVES--LKLA 358
P L+N ++A R + CL+ + E+R + ++++ LK+A
Sbjct: 235 ---PELQNPEKLSAIFR--DFLNRCLEMDVEKRGSAKELIQHQFLKIA 277
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 97/216 (44%), Gaps = 16/216 (7%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQ-WLAEVQFLGVVS 132
+ + IGEG +G V + VA+KK++ Q + Q L E++ L
Sbjct: 29 YTNLSYIGEGAYGMVCSAY-----DNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR 83
Query: 133 HPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEG 192
H N++ + ++ + + + + L L ++ L IL G
Sbjct: 84 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQIL---RG 140
Query: 193 LAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAR-EGPTGDHTHVSTAVVGTYGY 251
L Y+H V++RD K SN+LL+ K+ DFGLAR P DHT T V T Y
Sbjct: 141 LKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWY 197
Query: 252 AAPEYI--ETGHLKSQSDIWSFGVVLYEILTGRRVL 285
APE + G+ KS DIWS G +L E+L+ R +
Sbjct: 198 RAPEIMLNSKGYTKS-IDIWSVGCILAEMLSNRPIF 232
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 130/288 (45%), Gaps = 36/288 (12%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLD-GRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVS 132
+ R KIG+G G+VY +D G+ VA++++N + + E+ +
Sbjct: 23 YTRFEKIGQGASGTVYTA----MDVATGQE--VAIRQMNLQQQPKKELIINEILVMRENK 76
Query: 133 HPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEG 192
+PN+V L DE + V EY+ SL D + + + + +
Sbjct: 77 NPNIVNYLDSYLVGDELWV----VMEYLAGGSLTDVV---TETCMDEGQIAAVCRECLQA 129
Query: 193 LAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYA 252
L +LH QVI+R+ K+ N+LL + KL+DFG + T + + ST +VGT +
Sbjct: 130 LEFLHSN---QVIHRNIKSDNILLGMDGSVKLTDFGFCAQ-ITPEQSKRST-MVGTPYWM 184
Query: 253 APEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKFSM 312
APE + + DIWS G++ E++ G P + + L + +G
Sbjct: 185 APEVVTRKAYGPKVDIWSLGIMAIEMIEGE------PPYLNENPLRALYLIATNGT---- 234
Query: 313 MIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVES--LKLA 358
P L+N ++A R + CL+ + E+R + ++++ LK+A
Sbjct: 235 ---PELQNPEKLSAIFR--DFLNRCLEMDVEKRGSAKELIQHQFLKIA 277
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 97/216 (44%), Gaps = 16/216 (7%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQ-WLAEVQFLGVVS 132
+ + IGEG +G V + VA+KK++ Q + Q L E++ L
Sbjct: 45 YTNLSYIGEGAYGMVCSAY-----DNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR 99
Query: 133 HPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEG 192
H N++ + ++ + + + + L L ++ L IL G
Sbjct: 100 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQIL---RG 156
Query: 193 LAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAR-EGPTGDHTHVSTAVVGTYGY 251
L Y+H V++RD K SN+LL+ K+ DFGLAR P DHT T V T Y
Sbjct: 157 LKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 213
Query: 252 AAPEYI--ETGHLKSQSDIWSFGVVLYEILTGRRVL 285
APE + G+ KS DIWS G +L E+L+ R +
Sbjct: 214 RAPEIMLNSKGYTKS-IDIWSVGCILAEMLSNRPIF 248
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 95/211 (45%), Gaps = 15/211 (7%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL-QGHKQWL-AEVQFLGVV 131
+ + IG G +G K R DG+ ++ K+L+ + + KQ L +EV L +
Sbjct: 8 YEVLYTIGTGSYGRCQK-IRRKSDGK----ILVWKELDYGSMTEAEKQMLVSEVNLLREL 62
Query: 132 SHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLF--SRAQPTLPWKTRLEIILGA 189
HPN+V+ Y D +V EY L + ++ + L + L ++
Sbjct: 63 KHPNIVRY--YDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQL 120
Query: 190 AEGLAYLHEGLE--IQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVG 247
L H + V++RD K +NV LDG KL DFGLAR T + VG
Sbjct: 121 TLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR--ILNHDTSFAKTFVG 178
Query: 248 TYGYAAPEYIETGHLKSQSDIWSFGVVLYEI 278
T Y +PE + +SDIWS G +LYE+
Sbjct: 179 TPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 94/222 (42%), Gaps = 28/222 (12%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQ-WLAEVQFLGVVS 132
+ + IGEG +G V + VA+KK++ Q + Q L E++ L
Sbjct: 45 YTNLSYIGEGAYGMVCSAY-----DNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR 99
Query: 133 HPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLE------II 186
H N++ + I R E M + L L L L +
Sbjct: 100 HENIIGI---------NDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFL 150
Query: 187 LGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAR-EGPTGDHTHVSTAV 245
GL Y+H V++RD K SN+LL+ K+ DFGLAR P DHT T
Sbjct: 151 YQILRGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEY 207
Query: 246 VGTYGYAAPEYI--ETGHLKSQSDIWSFGVVLYEILTGRRVL 285
V T Y APE + G+ KS DIWS G +L E+L+ R +
Sbjct: 208 VATRWYRAPEIMLNSKGYTKS-IDIWSVGCILAEMLSNRPIF 248
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 96/216 (44%), Gaps = 16/216 (7%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQ-WLAEVQFLGVVS 132
+ + IGEG +G V + VA+KK++ Q + Q L E++ L
Sbjct: 29 YTNLSYIGEGAYGMVCSAY-----DNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR 83
Query: 133 HPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEG 192
H N++ + ++ + + + + L L + L IL G
Sbjct: 84 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICYFLYQIL---RG 140
Query: 193 LAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAR-EGPTGDHTHVSTAVVGTYGY 251
L Y+H V++RD K SN+LL+ K+ DFGLAR P DHT T V T Y
Sbjct: 141 LKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 197
Query: 252 AAPEYI--ETGHLKSQSDIWSFGVVLYEILTGRRVL 285
APE + G+ KS DIWS G +L E+L+ R +
Sbjct: 198 RAPEIMLNSKGYTKS-IDIWSVGCILAEMLSNRPIF 232
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 92/205 (44%), Gaps = 21/205 (10%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQG-HKQWLAEVQFLGVVSHPNLVK 138
IGEG FG V++G + L VA+K N +++L E + HP++VK
Sbjct: 15 IGEGQFGDVHQGIY--MSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 72
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRS-LEDRLFSRAQPTLPWKTRLEIILGA---AEGLA 194
L+G + I L + RS L+ R +S +L IL A + LA
Sbjct: 73 LIGVITENPVWIIMELCTLGEL--RSFLQVRKYSLDLASL--------ILYAYQLSTALA 122
Query: 195 YLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAP 254
YL + ++RD NVL+ N KL DFGL+R + S + + AP
Sbjct: 123 YLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI-KWMAP 178
Query: 255 EYIETGHLKSQSDIWSFGVVLYEIL 279
E I S SD+W FGV ++EIL
Sbjct: 179 ESINFRRFTSASDVWMFGVCMWEIL 203
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 92/205 (44%), Gaps = 21/205 (10%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQG-HKQWLAEVQFLGVVSHPNLVK 138
IGEG FG V++G + L VA+K N +++L E + HP++VK
Sbjct: 18 IGEGQFGDVHQGIY--MSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 75
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRS-LEDRLFSRAQPTLPWKTRLEIILGA---AEGLA 194
L+G + I L + RS L+ R +S +L IL A + LA
Sbjct: 76 LIGVITENPVWIIMELCTLGEL--RSFLQVRKYSLDLASL--------ILYAYQLSTALA 125
Query: 195 YLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAP 254
YL + ++RD NVL+ N KL DFGL+R + S + + AP
Sbjct: 126 YLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI-KWMAP 181
Query: 255 EYIETGHLKSQSDIWSFGVVLYEIL 279
E I S SD+W FGV ++EIL
Sbjct: 182 ESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 97/216 (44%), Gaps = 16/216 (7%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQ-WLAEVQFLGVVS 132
+ + IGEG +G V + VA+KK++ Q + Q L E++ L
Sbjct: 25 YTNLSYIGEGAYGMVCSAY-----DNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR 79
Query: 133 HPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEG 192
H N++ + ++ + + + + L L ++ L IL G
Sbjct: 80 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQIL---RG 136
Query: 193 LAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAR-EGPTGDHTHVSTAVVGTYGY 251
L Y+H V++RD K SN+LL+ K+ DFGLAR P DHT T V T Y
Sbjct: 137 LKYIHSA---NVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWY 193
Query: 252 AAPEYI--ETGHLKSQSDIWSFGVVLYEILTGRRVL 285
APE + G+ KS DIWS G +L E+L+ R +
Sbjct: 194 RAPEIMLNSKGYTKS-IDIWSVGCILAEMLSNRPIF 228
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 111/237 (46%), Gaps = 25/237 (10%)
Query: 56 EHHLRVFDMQELRE--ATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNH 113
+H LR ++ E F + +G G +G V+ +R + G + A+K L
Sbjct: 36 KHELRTANLTGHAEKVGIENFELLKVLGTGAYGKVF--LVRKISGHDTGKLYAMKVLKKA 93
Query: 114 GL----QGHKQWLAEVQFL-GVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDR 168
+ + + E Q L + P LV L TE + L+ +Y+ L
Sbjct: 94 TIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTE----TKLHLILDYINGGELFTH 149
Query: 169 LFSRAQPTLPWKTRLEIILG-AAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDF 227
L R + T + ++I +G L +LH+ + +IYRD K N+LLD N L+DF
Sbjct: 150 LSQRERFT---EHEVQIYVGEIVLALEHLHK---LGIIYRDIKLENILLDSNGHVVLTDF 203
Query: 228 GLAREGPTGDHTHVSTAVVGTYGYAAPEYI---ETGHLKSQSDIWSFGVVLYEILTG 281
GL++E D T + GT Y AP+ + ++GH K+ D WS GV++YE+LTG
Sbjct: 204 GLSKE-FVADETERAYDFCGTIEYMAPDIVRGGDSGHDKA-VDWWSLGVLMYELLTG 258
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 92/205 (44%), Gaps = 21/205 (10%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQG-HKQWLAEVQFLGVVSHPNLVK 138
IGEG FG V++G + L VA+K N +++L E + HP++VK
Sbjct: 20 IGEGQFGDVHQGIY--MSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 77
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRS-LEDRLFSRAQPTLPWKTRLEIILGA---AEGLA 194
L+G + I L + RS L+ R +S +L IL A + LA
Sbjct: 78 LIGVITENPVWIIMELCTLGEL--RSFLQVRKYSLDLASL--------ILYAYQLSTALA 127
Query: 195 YLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAP 254
YL + ++RD NVL+ N KL DFGL+R + S + + AP
Sbjct: 128 YLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI-KWMAP 183
Query: 255 EYIETGHLKSQSDIWSFGVVLYEIL 279
E I S SD+W FGV ++EIL
Sbjct: 184 ESINFRRFTSASDVWMFGVCMWEIL 208
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 82/168 (48%), Gaps = 21/168 (12%)
Query: 122 LAEVQFLGVVS-HPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWK 180
L EV L VS HPN+++L E LV++ M L D L + TL K
Sbjct: 58 LKEVDILRKVSGHPNIIQL----KDTYETNTFFFLVFDLMKKGELFDYLTEKV--TLSEK 111
Query: 181 TRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTH 240
+I+ E + LH+ + +++RD K N+LLD + KL+DFG + + G+
Sbjct: 112 ETRKIMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLR 168
Query: 241 VSTAVVGTYGYAAPEYIET-------GHLKSQSDIWSFGVVLYEILTG 281
V GT Y APE IE G+ K + D+WS GV++Y +L G
Sbjct: 169 ---EVCGTPSYLAPEIIECSMNDNHPGYGK-EVDMWSTGVIMYTLLAG 212
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 82/168 (48%), Gaps = 21/168 (12%)
Query: 122 LAEVQFLGVVS-HPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWK 180
L EV L VS HPN+++L E LV++ M L D L + TL K
Sbjct: 71 LKEVDILRKVSGHPNIIQL----KDTYETNTFFFLVFDLMKKGELFDYLTEKV--TLSEK 124
Query: 181 TRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTH 240
+I+ E + LH+ + +++RD K N+LLD + KL+DFG + + G+
Sbjct: 125 ETRKIMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLR 181
Query: 241 VSTAVVGTYGYAAPEYIET-------GHLKSQSDIWSFGVVLYEILTG 281
V GT Y APE IE G+ K + D+WS GV++Y +L G
Sbjct: 182 ---EVCGTPSYLAPEIIECSMNDNHPGYGK-EVDMWSTGVIMYTLLAG 225
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 92/205 (44%), Gaps = 21/205 (10%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQG-HKQWLAEVQFLGVVSHPNLVK 138
IGEG FG V++G + L VA+K N +++L E + HP++VK
Sbjct: 46 IGEGQFGDVHQGIY--MSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 103
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRS-LEDRLFSRAQPTLPWKTRLEIILGA---AEGLA 194
L+G + I L + RS L+ R +S +L IL A + LA
Sbjct: 104 LIGVITENPVWIIMELCTLGEL--RSFLQVRKYSLDLASL--------ILYAYQLSTALA 153
Query: 195 YLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAP 254
YL + ++RD NVL+ N KL DFGL+R + S + + AP
Sbjct: 154 YLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI-KWMAP 209
Query: 255 EYIETGHLKSQSDIWSFGVVLYEIL 279
E I S SD+W FGV ++EIL
Sbjct: 210 ESINFRRFTSASDVWMFGVCMWEIL 234
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 92/205 (44%), Gaps = 21/205 (10%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQG-HKQWLAEVQFLGVVSHPNLVK 138
IGEG FG V++G + L VA+K N +++L E + HP++VK
Sbjct: 21 IGEGQFGDVHQGIY--MSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 78
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRS-LEDRLFSRAQPTLPWKTRLEIILGA---AEGLA 194
L+G + I L + RS L+ R +S +L IL A + LA
Sbjct: 79 LIGVITENPVWIIMELCTLGEL--RSFLQVRKYSLDLASL--------ILYAYQLSTALA 128
Query: 195 YLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAP 254
YL + ++RD NVL+ N KL DFGL+R + S + + AP
Sbjct: 129 YLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI-KWMAP 184
Query: 255 EYIETGHLKSQSDIWSFGVVLYEIL 279
E I S SD+W FGV ++EIL
Sbjct: 185 ESINFRRFTSASDVWMFGVCMWEIL 209
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 98/210 (46%), Gaps = 26/210 (12%)
Query: 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVK-KLNNHGLQGHKQWLAEVQFLGVVSHPNLV 137
++G G FG+V KG + V +K + N+ L+ + LAE + + +P +V
Sbjct: 34 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALK--DELLAEANVMQQLDNPYIV 91
Query: 138 KLLGYCSTEDERGIQRLL----VYEYMP-NRSLEDRLFSRAQPTLPWKTRLEIILGAAEG 192
+++G C E + + + +Y+ NR ++D K +E++ + G
Sbjct: 92 RMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKD------------KNIIELVHQVSMG 139
Query: 193 LAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTY--G 250
+ YL E ++RD NVLL K+SDFGL++ D + G +
Sbjct: 140 MKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVK 195
Query: 251 YAAPEYIETGHLKSQSDIWSFGVVLYEILT 280
+ APE I S+SD+WSFGV+++E +
Sbjct: 196 WYAPECINYYKFSSKSDVWSFGVLMWEAFS 225
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 98/210 (46%), Gaps = 26/210 (12%)
Query: 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVK-KLNNHGLQGHKQWLAEVQFLGVVSHPNLV 137
++G G FG+V KG + V +K + N+ L+ + LAE + + +P +V
Sbjct: 34 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALK--DELLAEANVMQQLDNPYIV 91
Query: 138 KLLGYCSTEDERGIQRLL----VYEYMP-NRSLEDRLFSRAQPTLPWKTRLEIILGAAEG 192
+++G C E + + + +Y+ NR ++D K +E++ + G
Sbjct: 92 RMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKD------------KNIIELVHQVSMG 139
Query: 193 LAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTY--G 250
+ YL E ++RD NVLL K+SDFGL++ D + G +
Sbjct: 140 MKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVK 195
Query: 251 YAAPEYIETGHLKSQSDIWSFGVVLYEILT 280
+ APE I S+SD+WSFGV+++E +
Sbjct: 196 WYAPECINYYKFSSKSDVWSFGVLMWEAFS 225
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 130/303 (42%), Gaps = 35/303 (11%)
Query: 59 LRVFDMQELREATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGH 118
L D+ LR+ F + +G G +G VYKG R + G+ + V + +
Sbjct: 11 LDEIDLSALRDPAGIFELVELVGNGTYGQVYKG--RHVK-TGQLAAIKVMDVTGDEEEEI 67
Query: 119 KQWLAEVQFLGVVSHP-NLVKLLGYCSTEDERGI--QRLLVYEYMPNRSLEDRLFSRAQP 175
KQ E+ L SH N+ G ++ G+ Q LV E+ S+ D + +
Sbjct: 68 KQ---EINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGN 124
Query: 176 TLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPT 235
TL + I GL++LH+ +VI+RD K NVLL N + KL DFG++ +
Sbjct: 125 TLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQ--L 179
Query: 236 GDHTHVSTAVVGTYGYAAPEYIETGH-----LKSQSDIWSFGVVLYEILTGRRVLERNRP 290
+GT + APE I +SD+WS G+ E+ G L P
Sbjct: 180 DRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHP 239
Query: 291 TMEQKLLEWVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQ 350
+ L + + PA PRL+++ +++ ++CL KN +RP Q
Sbjct: 240 ---MRALFLIPRNPA----------PRLKSK---KWSKKFQSFIESCLVKNHSQRPATEQ 283
Query: 351 VVE 353
+++
Sbjct: 284 LMK 286
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 98/210 (46%), Gaps = 26/210 (12%)
Query: 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVK-KLNNHGLQGHKQWLAEVQFLGVVSHPNLV 137
++G G FG+V KG + V +K + N+ L+ + LAE + + +P +V
Sbjct: 24 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALK--DELLAEANVMQQLDNPYIV 81
Query: 138 KLLGYCSTEDERGIQRLL----VYEYMP-NRSLEDRLFSRAQPTLPWKTRLEIILGAAEG 192
+++G C E + + + +Y+ NR ++D K +E++ + G
Sbjct: 82 RMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKD------------KNIIELVHQVSMG 129
Query: 193 LAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTY--G 250
+ YL E ++RD NVLL K+SDFGL++ D + G +
Sbjct: 130 MKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVK 185
Query: 251 YAAPEYIETGHLKSQSDIWSFGVVLYEILT 280
+ APE I S+SD+WSFGV+++E +
Sbjct: 186 WYAPECINYYKFSSKSDVWSFGVLMWEAFS 215
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 127/284 (44%), Gaps = 54/284 (19%)
Query: 67 LREATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQ 126
LR A++ F + +G+G FG V K LD R A+KK+ H + L+EV
Sbjct: 2 LRYASD-FEEIAVLGQGAFGQVVKAR-NALDSR----YYAIKKIR-HTEEKLSTILSEVM 54
Query: 127 FLGVVSHPNLVKLLGYCSTEDERGIQR-----------LLVYEYMPNRSLEDRLFSR--- 172
L ++H +V+ Y + + R + + EY N +L D + S
Sbjct: 55 LLASLNHQYVVRY--YAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLN 112
Query: 173 AQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAR- 231
Q W+ +I+ E L+Y+H +I+RD K N+ +D + K+ DFGLA+
Sbjct: 113 QQRDEYWRLFRQIL----EALSYIHSQ---GIIHRDLKPMNIFIDESRNVKIGDFGLAKN 165
Query: 232 ------------EGPTGDHTHVSTAVVGTYGYAAPEYIE-TGHLKSQSDIWSFGVVLYEI 278
+ G ++++A +GT Y A E ++ TGH + D++S G++ +E+
Sbjct: 166 VHRSLDILKLDSQNLPGSSDNLTSA-IGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEM 224
Query: 279 L----TGRRVLERNRPTMEQKLLEWVKQFPADGKKFSMMIDPRL 318
+ TG R + +KL +FP D M ++ ++
Sbjct: 225 IYPFSTGME-----RVNILKKLRSVSIEFPPDFDDNKMKVEKKI 263
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 54/97 (55%), Gaps = 7/97 (7%)
Query: 192 GLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAR-EGPTGDHTHVSTAVVGTYG 250
GL Y+H V++RD K SN+LL+ K+ DFGLAR P DHT T V T
Sbjct: 140 GLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 196
Query: 251 YAAPEYI--ETGHLKSQSDIWSFGVVLYEILTGRRVL 285
Y APE + G+ KS DIWS G +L E+L+ R +
Sbjct: 197 YRAPEIMLNSKGYTKS-IDIWSVGCILAEMLSNRPIF 232
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 92/205 (44%), Gaps = 21/205 (10%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQG-HKQWLAEVQFLGVVSHPNLVK 138
IGEG FG V++G + L VA+K N +++L E + HP++VK
Sbjct: 23 IGEGQFGDVHQGIY--MSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 80
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRS-LEDRLFSRAQPTLPWKTRLEIILGA---AEGLA 194
L+G + I L + RS L+ R +S +L IL A + LA
Sbjct: 81 LIGVITENPVWIIMELCTLGEL--RSFLQVRKYSLDLASL--------ILYAYQLSTALA 130
Query: 195 YLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAP 254
YL + ++RD NVL+ N KL DFGL+R + S + + AP
Sbjct: 131 YLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI-KWMAP 186
Query: 255 EYIETGHLKSQSDIWSFGVVLYEIL 279
E I S SD+W FGV ++EIL
Sbjct: 187 ESINFRRFTSASDVWMFGVCMWEIL 211
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 100/208 (48%), Gaps = 21/208 (10%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKL 139
IG G FG V++ + D VA+KK+ LQ + E+Q + +V HPN+V L
Sbjct: 48 IGNGSFGVVFQAKLVESDE------VAIKKV----LQDKRFKNRELQIMRIVKHPNVVDL 97
Query: 140 LGYCSTEDERGIQRL--LVYEYMPNRSLE-DRLFSRAQPTLPWKTRLEIILGAAEGLAYL 196
+ + ++ + LV EY+P R +++ + T+P + LAY+
Sbjct: 98 KAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYI 157
Query: 197 HEGLEIQVIYRDFKTSNVLLD-GNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPE 255
H I + +RD K N+LLD + KL DFG A+ G+ + + + + Y APE
Sbjct: 158 H---SIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEP---NVSXICSRYYRAPE 211
Query: 256 YI-ETGHLKSQSDIWSFGVVLYEILTGR 282
I + + DIWS G V+ E++ G+
Sbjct: 212 LIFGATNYTTNIDIWSTGCVMAELMQGQ 239
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 92/205 (44%), Gaps = 21/205 (10%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQG-HKQWLAEVQFLGVVSHPNLVK 138
IGEG FG V++G + + VA+K N +++L E + HP++VK
Sbjct: 18 IGEGQFGDVHQGIY--MSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 75
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRS-LEDRLFSRAQPTLPWKTRLEIILGA---AEGLA 194
L+G + I L + RS L+ R +S +L IL A + LA
Sbjct: 76 LIGVITENPVWIIMELCTLGEL--RSFLQVRKYSLDLASL--------ILYAYQLSTALA 125
Query: 195 YLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAP 254
YL + ++RD NVL+ N KL DFGL+R + S + + AP
Sbjct: 126 YLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI-KWMAP 181
Query: 255 EYIETGHLKSQSDIWSFGVVLYEIL 279
E I S SD+W FGV ++EIL
Sbjct: 182 ESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 98/210 (46%), Gaps = 26/210 (12%)
Query: 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVK-KLNNHGLQGHKQWLAEVQFLGVVSHPNLV 137
++G G FG+V KG + V +K + N+ L+ + LAE + + +P +V
Sbjct: 14 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALK--DELLAEANVMQQLDNPYIV 71
Query: 138 KLLGYCSTEDERGIQRLL----VYEYMP-NRSLEDRLFSRAQPTLPWKTRLEIILGAAEG 192
+++G C E + + + +Y+ NR ++D K +E++ + G
Sbjct: 72 RMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKD------------KNIIELVHQVSMG 119
Query: 193 LAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTY--G 250
+ YL E ++RD NVLL K+SDFGL++ D + G +
Sbjct: 120 MKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVK 175
Query: 251 YAAPEYIETGHLKSQSDIWSFGVVLYEILT 280
+ APE I S+SD+WSFGV+++E +
Sbjct: 176 WYAPECINYYKFSSKSDVWSFGVLMWEAFS 205
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 100/212 (47%), Gaps = 16/212 (7%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNN--HGLQGHKQWLAEVQFLGVVSHPNLV 137
IG G +G V R L G+ VA+KK+ N + K+ L E++ L H N++
Sbjct: 62 IGNGAYGVVSSAR-RRLTGQQ----VAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNII 116
Query: 138 KLLGYCSTEDERG-IQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYL 196
+ G + + V + L + S +QP R + GL Y+
Sbjct: 117 AIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHS-SQPLTLEHVRY-FLYQLLRGLKYM 174
Query: 197 HEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPT--GDHTHVSTAVVGTYGYAAP 254
H QVI+RD K SN+L++ N + K+ DFG+AR T +H + T V T Y AP
Sbjct: 175 HSA---QVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAP 231
Query: 255 EYIETGHLKSQS-DIWSFGVVLYEILTGRRVL 285
E + + H +Q+ D+WS G + E+L R++
Sbjct: 232 ELMLSLHEYTQAIDLWSVGCIFGEMLARRQLF 263
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 102/211 (48%), Gaps = 20/211 (9%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSH 133
++ + KIGEG +G VYK + GE + +L + E+ L + H
Sbjct: 4 YHGLEKIGEGTYGVVYKAQ----NNYGETFALKKIRLEKEDEGIPSTTIREISILKELKH 59
Query: 134 PNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGL 193
N+VKL T+ + +LV+E++ ++ L+ +L + L T +L G+
Sbjct: 60 SNIVKLYDVIHTKK----RLVLVFEHL-DQDLK-KLLDVCEGGLESVTAKSFLLQLLNGI 113
Query: 194 AYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREG--PTGDHTHVSTAVVGTYGY 251
AY H+ +V++RD K N+L++ + K++DFGLAR P +TH V T Y
Sbjct: 114 AYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTH----EVVTLWY 166
Query: 252 AAPEYIETGHLKSQS-DIWSFGVVLYEILTG 281
AP+ + S + DIWS G + E++ G
Sbjct: 167 RAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 129/288 (44%), Gaps = 36/288 (12%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLD-GRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVS 132
+ R KIG+G G+VY +D G+ VA++++N + + E+ +
Sbjct: 22 YTRFEKIGQGASGTVYTA----MDVATGQE--VAIRQMNLQQQPKKELIINEILVMRENK 75
Query: 133 HPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEG 192
+PN+V L DE + V EY+ SL D + + + + +
Sbjct: 76 NPNIVNYLDSYLVGDELWV----VMEYLAGGSLTDVV---TETCMDEGQIAAVCRECLQA 128
Query: 193 LAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYA 252
L +LH QVI+RD K+ N+LL + KL+DFG + T + + S +VGT +
Sbjct: 129 LEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQ-ITPEQSKRSX-MVGTPYWM 183
Query: 253 APEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKFSM 312
APE + + DIWS G++ E++ G P + + L + +G
Sbjct: 184 APEVVTRKAYGPKVDIWSLGIMAIEMIEGE------PPYLNENPLRALYLIATNGT---- 233
Query: 313 MIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVES--LKLA 358
P L+N ++A R + CL+ + E+R + ++++ LK+A
Sbjct: 234 ---PELQNPEKLSAIFR--DFLNRCLEMDVEKRGSAKELLQHQFLKIA 276
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 98/210 (46%), Gaps = 26/210 (12%)
Query: 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVK-KLNNHGLQGHKQWLAEVQFLGVVSHPNLV 137
++G G FG+V KG + V +K + N+ L+ + LAE + + +P +V
Sbjct: 32 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALK--DELLAEANVMQQLDNPYIV 89
Query: 138 KLLGYCSTEDERGIQRLL----VYEYMP-NRSLEDRLFSRAQPTLPWKTRLEIILGAAEG 192
+++G C E + + + +Y+ NR ++D K +E++ + G
Sbjct: 90 RMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKD------------KNIIELVHQVSMG 137
Query: 193 LAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTY--G 250
+ YL E ++RD NVLL K+SDFGL++ D + G +
Sbjct: 138 MKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVK 193
Query: 251 YAAPEYIETGHLKSQSDIWSFGVVLYEILT 280
+ APE I S+SD+WSFGV+++E +
Sbjct: 194 WYAPECINYYKFSSKSDVWSFGVLMWEAFS 223
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 102/211 (48%), Gaps = 20/211 (9%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSH 133
++ + KIGEG +G VYK + GE + +L + E+ L + H
Sbjct: 4 YHGLEKIGEGTYGVVYKAQ----NNYGETFALKKIRLEKEDEGIPSTTIREISILKELKH 59
Query: 134 PNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGL 193
N+VKL T+ + +LV+E++ ++ L+ +L + L T +L G+
Sbjct: 60 SNIVKLYDVIHTKK----RLVLVFEHL-DQDLK-KLLDVCEGGLESVTAKSFLLQLLNGI 113
Query: 194 AYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREG--PTGDHTHVSTAVVGTYGY 251
AY H+ +V++RD K N+L++ + K++DFGLAR P +TH V T Y
Sbjct: 114 AYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTH----EVVTLWY 166
Query: 252 AAPEYIETGHLKSQS-DIWSFGVVLYEILTG 281
AP+ + S + DIWS G + E++ G
Sbjct: 167 RAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 98/210 (46%), Gaps = 26/210 (12%)
Query: 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVK-KLNNHGLQGHKQWLAEVQFLGVVSHPNLV 137
++G G FG+V KG + V +K + N+ L+ + LAE + + +P +V
Sbjct: 12 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALK--DELLAEANVMQQLDNPYIV 69
Query: 138 KLLGYCSTEDERGIQRLL----VYEYMP-NRSLEDRLFSRAQPTLPWKTRLEIILGAAEG 192
+++G C E + + + +Y+ NR ++D K +E++ + G
Sbjct: 70 RMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKD------------KNIIELVHQVSMG 117
Query: 193 LAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTY--G 250
+ YL E ++RD NVLL K+SDFGL++ D + G +
Sbjct: 118 MKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVK 173
Query: 251 YAAPEYIETGHLKSQSDIWSFGVVLYEILT 280
+ APE I S+SD+WSFGV+++E +
Sbjct: 174 WYAPECINYYKFSSKSDVWSFGVLMWEAFS 203
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 98/210 (46%), Gaps = 26/210 (12%)
Query: 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVK-KLNNHGLQGHKQWLAEVQFLGVVSHPNLV 137
++G G FG+V KG + V +K + N+ L+ + LAE + + +P +V
Sbjct: 18 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALK--DELLAEANVMQQLDNPYIV 75
Query: 138 KLLGYCSTEDERGIQRLL----VYEYMP-NRSLEDRLFSRAQPTLPWKTRLEIILGAAEG 192
+++G C E + + + +Y+ NR ++D K +E++ + G
Sbjct: 76 RMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKD------------KNIIELVHQVSMG 123
Query: 193 LAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTY--G 250
+ YL E ++RD NVLL K+SDFGL++ D + G +
Sbjct: 124 MKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVK 179
Query: 251 YAAPEYIETGHLKSQSDIWSFGVVLYEILT 280
+ APE I S+SD+WSFGV+++E +
Sbjct: 180 WYAPECINYYKFSSKSDVWSFGVLMWEAFS 209
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 105/221 (47%), Gaps = 29/221 (13%)
Query: 70 ATNGFNRMLK---IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQ 126
A N F + K +G G FG V+K + L +A K + G++ ++ E+
Sbjct: 84 AVNSFYTVSKTEILGGGRFGQVHK-----CEETATGLKLAAKIIKTRGMKDKEEVKNEIS 138
Query: 127 FLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEII 186
+ + H NL++L Y + E + I +LV EY+ L DR+ + T L+ I
Sbjct: 139 VMNQLDHANLIQL--YDAFESKNDI--VLVMEYVDGGELFDRIIDESYNL----TELDTI 190
Query: 187 L---GAAEGLAYLHEGLEIQVIYRDFKTSNVLL---DGNFKPKLSDFGLAREGPTGDHTH 240
L EG+ ++H+ + +++ D K N+L D + K+ DFGLAR +
Sbjct: 191 LFMKQICEGIRHMHQ---MYILHLDLKPENILCVNRDAK-QIKIIDFGLARRYKPREKLK 246
Query: 241 VSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTG 281
V+ GT + APE + + +D+WS GV+ Y +L+G
Sbjct: 247 VN---FGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSG 284
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 89/204 (43%), Gaps = 19/204 (9%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQG-HKQWLAEVQFLGVVSHPNLVK 138
IGEG FG V++G + + VA+K N +++L E + HP++VK
Sbjct: 18 IGEGQFGDVHQGIY--MSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 75
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGA---AEGLAY 195
L+G + I L + L+ R FS +L IL A + LAY
Sbjct: 76 LIGVITENPVWIIMELCTLGEL-RSFLQVRKFSLDLASL--------ILYAYQLSTALAY 126
Query: 196 LHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPE 255
L + ++RD NVL+ KL DFGL+R + S + + APE
Sbjct: 127 LESK---RFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPI-KWMAPE 182
Query: 256 YIETGHLKSQSDIWSFGVVLYEIL 279
I S SD+W FGV ++EIL
Sbjct: 183 SINFRRFTSASDVWMFGVCMWEIL 206
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 100/210 (47%), Gaps = 30/210 (14%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQ---------WLAEVQFLGV 130
+GEG F +VYK + +VA+KK+ GH+ L E++ L
Sbjct: 18 LGEGQFATVYKAR-----DKNTNQIVAIKKIK----LGHRSEAKDGINRTALREIKLLQE 68
Query: 131 VSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAA 190
+SHPN++ LL + LV+++M LE + + P + +++
Sbjct: 69 LSHPNIIGLLDAFGHKSNIS----LVFDFM-ETDLEVIIKDNSLVLTPSHIKAYMLM-TL 122
Query: 191 EGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYG 250
+GL YLH+ +++RD K +N+LLD N KL+DFGLA+ + + + V T
Sbjct: 123 QGLEYLHQH---WILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVV--TRW 177
Query: 251 YAAPEYIETGHLKSQS-DIWSFGVVLYEIL 279
Y APE + + D+W+ G +L E+L
Sbjct: 178 YRAPELLFGARMYGVGVDMWAVGCILAELL 207
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 102/211 (48%), Gaps = 20/211 (9%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSH 133
++ + KIGEG +G VYK + GE + +L + E+ L + H
Sbjct: 4 YHGLEKIGEGTYGVVYKAQ----NNYGETFALKKIRLEKEDEGIPSTTIREISILKELKH 59
Query: 134 PNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGL 193
N+VKL T+ + +LV+E++ ++ L+ +L + L T +L G+
Sbjct: 60 SNIVKLYDVIHTKK----RLVLVFEHL-DQDLK-KLLDVCEGGLESVTAKSFLLQLLNGI 113
Query: 194 AYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREG--PTGDHTHVSTAVVGTYGY 251
AY H+ +V++RD K N+L++ + K++DFGLAR P +TH + T Y
Sbjct: 114 AYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTH----EIVTLWY 166
Query: 252 AAPEYIETGHLKSQS-DIWSFGVVLYEILTG 281
AP+ + S + DIWS G + E++ G
Sbjct: 167 RAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 96/221 (43%), Gaps = 24/221 (10%)
Query: 68 REATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL---QGHKQWLAE 124
R FN ++ +G+G FG V D +G + A+K L + + + E
Sbjct: 15 RVKLTDFNFLMVLGKGSFGKVMLA-----DRKGTEELYAIKILKKDVVIQDDDVECTMVE 69
Query: 125 VQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLE 184
+ L ++ P + L C +R V EY+ L + + P +
Sbjct: 70 KRVLALLDKPPFLTQLHSCFQTVDR---LYFVMEYVNGGDLMYHIQQVGKFKEP-----Q 121
Query: 185 IILGAAE---GLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHV 241
+ AAE GL +LH+ +IYRD K NV+LD K++DFG+ +E T
Sbjct: 122 AVFYAAEISIGLFFLHKR---GIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVT-- 176
Query: 242 STAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGR 282
+ GT Y APE I D W++GV+LYE+L G+
Sbjct: 177 TREFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQ 217
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 100/221 (45%), Gaps = 24/221 (10%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWL-AEVQFLGVV-SHPNLV 137
+G G FG V T + G + VAVK L ++ L +E++ + + SH N+V
Sbjct: 53 LGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIV 112
Query: 138 KLLGYCSTEDERGIQRLLVYEYMPNRSLEDRL------FSRAQPTLPWKTRLE-----II 186
LLG C+ L++EY L + L FS + + RLE +
Sbjct: 113 NLLGACTLSG----PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNV 168
Query: 187 LGAAEGLAYLHE---GLEI----QVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHT 239
L + L + ++ G+E ++RD NVL+ K+ DFGLAR+ + +
Sbjct: 169 LTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNY 228
Query: 240 HVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILT 280
V + APE + G +SD+WS+G++L+EI +
Sbjct: 229 VVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 100/212 (47%), Gaps = 16/212 (7%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNN--HGLQGHKQWLAEVQFLGVVSHPNLV 137
IG G +G V R L G+ VA+KK+ N + K+ L E++ L H N++
Sbjct: 63 IGNGAYGVVSSARRR-LTGQQ----VAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNII 117
Query: 138 KLLGYCSTEDERG-IQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYL 196
+ G + + V + L + S +QP R + GL Y+
Sbjct: 118 AIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHS-SQPLTLEHVRY-FLYQLLRGLKYM 175
Query: 197 HEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPT--GDHTHVSTAVVGTYGYAAP 254
H QVI+RD K SN+L++ N + K+ DFG+AR T +H + T V T Y AP
Sbjct: 176 HSA---QVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAP 232
Query: 255 EYIETGHLKSQS-DIWSFGVVLYEILTGRRVL 285
E + + H +Q+ D+WS G + E+L R++
Sbjct: 233 ELMLSLHEYTQAIDLWSVGCIFGEMLARRQLF 264
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 127/303 (41%), Gaps = 48/303 (15%)
Query: 63 DMQELREATNGFNRML------KIGEGGFGSVYKGTIRPLDGRGEPLVVAVK-KLNNHGL 115
D +E+R +R L ++G G FG+V KG + V +K + N+ L
Sbjct: 354 DPEEIRPKEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPAL 413
Query: 116 QGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLL----VYEYMP-NRSLEDRLF 170
+ + LAE + + +P +V+++G C E + + + +Y+ NR ++D
Sbjct: 414 K--DELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKD--- 468
Query: 171 SRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLA 230
K +E++ + G+ YL E ++RD NVLL K+SDFGL+
Sbjct: 469 ---------KNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLS 516
Query: 231 REGPTGDHTHVSTAVVGTY--GYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERN 288
+ D + G + + APE I S+SD+WSFGV+++E
Sbjct: 517 K-ALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAF--------- 566
Query: 289 RPTMEQKLLEWVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTM 348
+ QK +K G + + M++ R R + L + C + E RP
Sbjct: 567 --SYGQKPYRGMK-----GSEVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGF 619
Query: 349 NQV 351
V
Sbjct: 620 AAV 622
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 128/288 (44%), Gaps = 36/288 (12%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLD-GRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVS 132
+ R KIG+G G+VY +D G+ VA++++N + + E+ +
Sbjct: 22 YTRFEKIGQGASGTVYTA----MDVATGQE--VAIRQMNLQQQPKKELIINEILVMRENK 75
Query: 133 HPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEG 192
+PN+V L DE + V EY+ SL D + + + + +
Sbjct: 76 NPNIVNYLDSYLVGDELWV----VMEYLAGGSLTDVV---TETCMDEGQIAAVCRECLQA 128
Query: 193 LAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYA 252
L +LH QVI+RD K+ N+LL + KL+DFG + T + + S +VGT +
Sbjct: 129 LEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQ-ITPEQSKRS-EMVGTPYWM 183
Query: 253 APEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKFSM 312
APE + + DIWS G++ E++ G P + + L + +G
Sbjct: 184 APEVVTRKAYGPKVDIWSLGIMAIEMIEGE------PPYLNENPLRALYLIATNGT---- 233
Query: 313 MIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVES--LKLA 358
P L+N ++A R + CL + E+R + ++++ LK+A
Sbjct: 234 ---PELQNPEKLSAIFR--DFLNRCLDMDVEKRGSAKELLQHQFLKIA 276
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 65/288 (22%), Positives = 123/288 (42%), Gaps = 38/288 (13%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSH 133
N + K+ E G ++KG +G +VV V K+ + + + + E L + SH
Sbjct: 12 LNFLTKLNENHSGELWKGR-----WQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSH 66
Query: 134 PNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGL 193
PN++ +LG C + L+ +MP SL + L + ++ L A G+
Sbjct: 67 PNVLPVLGACQSPP--APHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGM 124
Query: 194 AYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLS--DFGLAREGPTGDHTHVSTAVVGTYGY 251
A+LH LE + + +V++D + ++S D + + P + +
Sbjct: 125 AFLHT-LEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQSP---------GRMYAPAW 174
Query: 252 AAPEYIET---GHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGK 308
APE ++ + +D+WSF V+L+E++T R P + +E + +G
Sbjct: 175 VAPEALQKKPEDTNRRSADMWSFAVLLWELVT------REVPFADLSNMEIGMKVALEG- 227
Query: 309 KFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLK 356
LR + V+KL C+ ++P +RP + +V L+
Sbjct: 228 ---------LRPTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILE 266
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 120/270 (44%), Gaps = 30/270 (11%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSH 133
F R+ IG G FG V ++ ++ + + K L+ + L E + L V+
Sbjct: 43 FERIKTIGTGSFGRVM--LVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 134 PNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRL---EIILGAA 190
P LVKL S +D + +V EYMP + L + + P R +I+L
Sbjct: 101 PFLVKL--EFSFKDNSNL--YMVMEYMPGGDMFSHLRRIGRFSEP-HARFYAAQIVLT-- 153
Query: 191 EGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAR--EGPTGDHTHVSTAVVGT 248
YLH + +IYRD K N+L+D K++DFG A+ +G T + GT
Sbjct: 154 --FEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRT-------WXLCGT 201
Query: 249 YGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPT-MEQKLLEWVKQFPADG 307
Y APE I + D W+ GV++YE+ G ++P + +K++ +FP+
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS-- 259
Query: 308 KKFSMMIDPRLRNQYSINAARRVAKLADNC 337
FS + LRN ++ +R L +
Sbjct: 260 -HFSSDLKDLLRNLLQVDLTKRFGNLKNGV 288
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 96/216 (44%), Gaps = 16/216 (7%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQ-WLAEVQFLGVVS 132
+ + IGEG +G V + VA+KK++ Q + Q L E++ L
Sbjct: 29 YTNLSYIGEGAYGMVCSAY-----DNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR 83
Query: 133 HPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEG 192
H N++ + ++ + + + + L L ++ L IL G
Sbjct: 84 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQIL---RG 140
Query: 193 LAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAR-EGPTGDHTHVSTAVVGTYGY 251
L Y+H V++RD K SN+LL+ K+ DFGLAR P DHT V T Y
Sbjct: 141 LKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWY 197
Query: 252 AAPEYI--ETGHLKSQSDIWSFGVVLYEILTGRRVL 285
APE + G+ KS DIWS G +L E+L+ R +
Sbjct: 198 RAPEIMLNSKGYTKS-IDIWSVGCILAEMLSNRPIF 232
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 96/216 (44%), Gaps = 16/216 (7%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQ-WLAEVQFLGVVS 132
+ + IGEG +G V + VA+KK++ Q + Q L E++ L
Sbjct: 30 YTNLSYIGEGAYGMVCSAY-----DNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR 84
Query: 133 HPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEG 192
H N++ + ++ + + + + L L ++ L IL G
Sbjct: 85 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQIL---RG 141
Query: 193 LAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAR-EGPTGDHTHVSTAVVGTYGY 251
L Y+H V++RD K SN+LL+ K+ DFGLAR P DHT V T Y
Sbjct: 142 LKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWY 198
Query: 252 AAPEYI--ETGHLKSQSDIWSFGVVLYEILTGRRVL 285
APE + G+ KS DIWS G +L E+L+ R +
Sbjct: 199 RAPEIMLNSKGYTKS-IDIWSVGCILAEMLSNRPIF 233
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 91/205 (44%), Gaps = 21/205 (10%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQG-HKQWLAEVQFLGVVSHPNLVK 138
IGEG FG V++G + + VA+K N +++L E + HP++VK
Sbjct: 398 IGEGQFGDVHQGIY--MSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 455
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRS-LEDRLFSRAQPTLPWKTRLEIILGA---AEGLA 194
L+G + I L + RS L+ R FS +L IL A + LA
Sbjct: 456 LIGVITENPVWIIMELCTLGEL--RSFLQVRKFSLDLASL--------ILYAYQLSTALA 505
Query: 195 YLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAP 254
YL + ++RD NVL+ KL DFGL+R + S + + AP
Sbjct: 506 YLESK---RFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPI-KWMAP 561
Query: 255 EYIETGHLKSQSDIWSFGVVLYEIL 279
E I S SD+W FGV ++EIL
Sbjct: 562 ESINFRRFTSASDVWMFGVCMWEIL 586
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 120/270 (44%), Gaps = 30/270 (11%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSH 133
F R+ IG G FG V ++ ++ + + K L+ + L E + L V+
Sbjct: 43 FERIKTIGTGSFGRVM--LVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 134 PNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRL---EIILGAA 190
P LVKL S +D + +V EYMP + L + + P R +I+L
Sbjct: 101 PFLVKL--EFSFKDNSNL--YMVMEYMPGGDMFSHLRRIGRFSEP-HARFYAAQIVLT-- 153
Query: 191 EGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAR--EGPTGDHTHVSTAVVGT 248
YLH + +IYRD K N+L+D K++DFG A+ +G T + GT
Sbjct: 154 --FEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRT-------WXLCGT 201
Query: 249 YGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPT-MEQKLLEWVKQFPADG 307
Y APE I + D W+ GV++YE+ G ++P + +K++ +FP+
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS-- 259
Query: 308 KKFSMMIDPRLRNQYSINAARRVAKLADNC 337
FS + LRN ++ +R L +
Sbjct: 260 -HFSSDLKDLLRNLLQVDLTKRFGNLKNGV 288
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 127/303 (41%), Gaps = 48/303 (15%)
Query: 63 DMQELREATNGFNRML------KIGEGGFGSVYKGTIRPLDGRGEPLVVAVK-KLNNHGL 115
D +E+R +R L ++G G FG+V KG + V +K + N+ L
Sbjct: 355 DPEEIRPKEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPAL 414
Query: 116 QGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLL----VYEYMP-NRSLEDRLF 170
+ + LAE + + +P +V+++G C E + + + +Y+ NR ++D
Sbjct: 415 K--DELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKD--- 469
Query: 171 SRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLA 230
K +E++ + G+ YL E ++RD NVLL K+SDFGL+
Sbjct: 470 ---------KNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLS 517
Query: 231 REGPTGDHTHVSTAVVGTY--GYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERN 288
+ D + G + + APE I S+SD+WSFGV+++E
Sbjct: 518 K-ALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAF--------- 567
Query: 289 RPTMEQKLLEWVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTM 348
+ QK +K G + + M++ R R + L + C + E RP
Sbjct: 568 --SYGQKPYRGMK-----GSEVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGF 620
Query: 349 NQV 351
V
Sbjct: 621 AAV 623
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 97/214 (45%), Gaps = 25/214 (11%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKL--NNHGLQGHKQWLAEVQFLGVV 131
+ ++ KIGEG +G V+K R +VA+KK + K L E++ L +
Sbjct: 5 YEKIGKIGEGSYGVVFKCR-----NRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQL 59
Query: 132 SHPNLVKLLGYCSTEDERGIQRL-LVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAA 190
HPNLV LL E R +RL LV+EY + L + R Q +P I
Sbjct: 60 KHPNLVNLL-----EVFRRKRRLHLVFEYCDHTVLHE--LDRYQRGVPEHLVKSITWQTL 112
Query: 191 EGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAR--EGPTGDHTHVSTAVVGT 248
+ + + H+ I+RD K N+L+ + KL DFG AR GP+ + V T
Sbjct: 113 QAVNFCHKH---NCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYY----DDEVAT 165
Query: 249 YGYAAPE-YIETGHLKSQSDIWSFGVVLYEILTG 281
Y +PE + D+W+ G V E+L+G
Sbjct: 166 RWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSG 199
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 97/210 (46%), Gaps = 26/210 (12%)
Query: 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVK-KLNNHGLQGHKQWLAEVQFLGVVSHPNLV 137
++G G FG+V KG + V +K + N+ L+ + LAE + + +P +V
Sbjct: 18 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALK--DELLAEANVMQQLDNPYIV 75
Query: 138 KLLGYCSTEDERGIQRLL----VYEYMP-NRSLEDRLFSRAQPTLPWKTRLEIILGAAEG 192
+++G C E + + + +Y+ NR ++D K +E++ + G
Sbjct: 76 RMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKD------------KNIIELVHQVSMG 123
Query: 193 LAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTY--G 250
+ YL E ++RD NVLL K+SDFGL++ D G +
Sbjct: 124 MKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENXYKAQTHGKWPVK 179
Query: 251 YAAPEYIETGHLKSQSDIWSFGVVLYEILT 280
+ APE I S+SD+WSFGV+++E +
Sbjct: 180 WYAPECINYYKFSSKSDVWSFGVLMWEAFS 209
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 48/91 (52%), Gaps = 4/91 (4%)
Query: 192 GLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGY 251
L YLH E V+YRD K N++LD + K++DFGL +EG T GT Y
Sbjct: 263 ALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT--MKTFCGTPEY 318
Query: 252 AAPEYIETGHLKSQSDIWSFGVVLYEILTGR 282
APE +E D W GVV+YE++ GR
Sbjct: 319 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 349
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 121/272 (44%), Gaps = 54/272 (19%)
Query: 67 LREATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQ 126
LR A++ F + +G+G FG V K LD R A+KK+ H + L+EV
Sbjct: 2 LRYASD-FEEIAVLGQGAFGQVVKAR-NALDSR----YYAIKKIR-HTEEKLSTILSEVX 54
Query: 127 FLGVVSHPNLVKLLGYCSTEDERGIQR-----------LLVYEYMPNRSLEDRLFSR--- 172
L ++H +V+ Y + + R + + EY NR+L D + S
Sbjct: 55 LLASLNHQYVVRY--YAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLN 112
Query: 173 AQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAR- 231
Q W+ +I+ E L+Y+H +I+R+ K N+ +D + K+ DFGLA+
Sbjct: 113 QQRDEYWRLFRQIL----EALSYIHSQ---GIIHRNLKPXNIFIDESRNVKIGDFGLAKN 165
Query: 232 ------------EGPTGDHTHVSTAVVGTYGYAAPEYIE-TGHLKSQSDIWSFGVVLYEI 278
+ G ++++A +GT Y A E ++ TGH + D +S G++ +E
Sbjct: 166 VHRSLDILKLDSQNLPGSSDNLTSA-IGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEX 224
Query: 279 L----TGRRVLERNRPTMEQKLLEWVKQFPAD 306
+ TG R + +KL +FP D
Sbjct: 225 IYPFSTGXE-----RVNILKKLRSVSIEFPPD 251
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 48/91 (52%), Gaps = 4/91 (4%)
Query: 192 GLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGY 251
L YLH E V+YRD K N++LD + K++DFGL +EG T GT Y
Sbjct: 260 ALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT--MKTFCGTPEY 315
Query: 252 AAPEYIETGHLKSQSDIWSFGVVLYEILTGR 282
APE +E D W GVV+YE++ GR
Sbjct: 316 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 346
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 98/229 (42%), Gaps = 32/229 (13%)
Query: 68 REATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKK----LNNHGLQGHKQWLA 123
R + F + +G+G FG V ++ G+ V V K L + ++ +
Sbjct: 19 RLGIDNFEFIRVLGKGSFGKVMLARVKE---TGDLYAVKVLKKDVILQDDDVECT---MT 72
Query: 124 EVQFLGVV-SHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSL-----EDRLFSRAQPTL 177
E + L + +HP L +L T D + V E++ L + R F A+
Sbjct: 73 EKRILSLARNHPFLTQLFCCFQTPD----RLFFVMEFVNGGDLMFHIQKSRRFDEARARF 128
Query: 178 PWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGD 237
EII L +LH+ +IYRD K NVLLD KL+DFG+ +EG
Sbjct: 129 ---YAAEII----SALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNG 178
Query: 238 HTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLE 286
T + GT Y APE ++ D W+ GV+LYE+L G E
Sbjct: 179 VT--TATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFE 225
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 94/211 (44%), Gaps = 15/211 (7%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL-QGHKQWL-AEVQFLGVV 131
+ + IG G +G K R DG+ ++ K+L+ + + KQ L +EV L +
Sbjct: 8 YEVLYTIGTGSYGRCQK-IRRKSDGK----ILVWKELDYGSMTEAEKQMLVSEVNLLREL 62
Query: 132 SHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLF--SRAQPTLPWKTRLEIILGA 189
HPN+V+ Y D +V EY L + ++ + L + L ++
Sbjct: 63 KHPNIVRY--YDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQL 120
Query: 190 AEGLAYLHEGLE--IQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVG 247
L H + V++RD K +NV LDG KL DFGLAR + VG
Sbjct: 121 TLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR--ILNHDEDFAKEFVG 178
Query: 248 TYGYAAPEYIETGHLKSQSDIWSFGVVLYEI 278
T Y +PE + +SDIWS G +LYE+
Sbjct: 179 TPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 125/295 (42%), Gaps = 38/295 (12%)
Query: 83 GGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGV--VSHPNLVKLL 140
G FG V+K + VAVK +Q + W E + + + H N+++ +
Sbjct: 35 GRFGCVWKAQLLNE-------YVAVKIFP---IQDKQSWQNEYEVYSLPGMKHENILQFI 84
Query: 141 GYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHE-- 198
G + L+ + SL D F +A + W I A GLAYLHE
Sbjct: 85 GAEKRGTSVDVDLWLITAFHEKGSLSD--FLKAN-VVSWNELCHIAETMARGLAYLHEDI 141
Query: 199 -----GLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAA 253
G + + +RD K+ NVLL N ++DFGLA + G + VGT Y A
Sbjct: 142 PGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMA 201
Query: 254 PEYIETGHLKSQS------DIWSFGVVLYEILTGRRVLERNRPTMEQKL--LEWVKQFPA 305
PE +E G + Q D+++ G+VL+E+ + R + P E L E + Q P+
Sbjct: 202 PEVLE-GAINFQRDAFLRIDMYAMGLVLWELAS--RCTAADGPVDEYMLPFEEEIGQHPS 258
Query: 306 DGKKFSMMID----PRLRNQYSINAAR-RVAKLADNCLKKNPEERPTMNQVVESL 355
+++ P LR+ + +A + + + C + E R + V E +
Sbjct: 259 LEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERI 313
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 123/283 (43%), Gaps = 34/283 (12%)
Query: 78 LKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLV 137
+KIGEG G V T + + VAVKK++ Q + EV + H N+V
Sbjct: 51 IKIGEGSTGIVCIATEKHTGKQ-----VAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVV 105
Query: 138 KLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLH 197
+ DE + V E++ +L D + + + + L L+YLH
Sbjct: 106 DMYSSYLVGDELWV----VMEFLEGGALTDIV---THTRMNEEQIATVCLSVLRALSYLH 158
Query: 198 EGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYI 257
VI+RD K+ ++LL + + KLSDFG + +VGT + APE I
Sbjct: 159 NQ---GVIHRDIKSDSILLTSDGRIKLSDFGFCAQ--VSKEVPKRKXLVGTPYWMAPEVI 213
Query: 258 ETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKFSMMIDPR 317
++ DIWS G+++ E++ G P + L+ +++ + PR
Sbjct: 214 SRLPYGTEVDIWSLGIMVIEMIDG------EPPYFNEPPLQAMRRIRDS-------LPPR 260
Query: 318 LRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVES--LKLA 358
+++ + +++ R D L + P +R T +++ LKLA
Sbjct: 261 VKDLHKVSSVLR--GFLDLMLVREPSQRATAQELLGHPFLKLA 301
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 132/291 (45%), Gaps = 47/291 (16%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKL 139
+G+G +G VY G R L + + +A+K++ + + E+ + H N+V+
Sbjct: 30 LGKGTYGIVYAG--RDLSNQ---VRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQY 84
Query: 140 LGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQP------TLPWKTRLEIILGAAEGL 193
LG S E G ++ + E +P SL L S+ P T+ + T+ +I+ EGL
Sbjct: 85 LGSFS---ENGFIKIFM-EQVPGGSLSALLRSKWGPLKDNEQTIGFYTK-QIL----EGL 135
Query: 194 AYLHEGLEIQVIYRDFKTSNVLLDG-NFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYA 252
YLH+ Q+++RD K NVL++ + K+SDFG ++ + GT Y
Sbjct: 136 KYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKR--LAGINPCTETFTGTLQYM 190
Query: 253 APEYIETG--HLKSQSDIWSFGVVLYEILTGR-RVLERNRPTMEQKLLEWVKQFPADGKK 309
APE I+ G +DIWS G + E+ TG+ E P Q + V F
Sbjct: 191 APEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEP---QAAMFKVGMFK----- 242
Query: 310 FSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVV--ESLKLA 358
+ P + S A + K C + +P++R N ++ E LK++
Sbjct: 243 ----VHPEIPESMSAEAKAFILK----CFEPDPDKRACANDLLVDEFLKVS 285
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 122/280 (43%), Gaps = 32/280 (11%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSH 133
+ +KIGEG G V + GR VAVK ++ Q + EV + H
Sbjct: 47 LDSYVKIGEGSTGIVCLAREKH-SGRQ----VAVKMMDLRKQQRRELLFNEVVIMRDYQH 101
Query: 134 PNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGL 193
N+V++ +E + + E++ +L D + +Q L + + + L
Sbjct: 102 FNVVEMYKSYLVGEELWV----LMEFLQGGALTDIV---SQVRLNEEQIATVCEAVLQAL 154
Query: 194 AYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAA 253
AYLH VI+RD K+ ++LL + + KLSDFG + +VGT + A
Sbjct: 155 AYLHAQ---GVIHRDIKSDSILLTLDGRVKLSDFGFCAQ--ISKDVPKRKXLVGTPYWMA 209
Query: 254 PEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKFSMM 313
PE I ++ DIWS G+++ E++ G + P K L + P
Sbjct: 210 PEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRL---RDSPP-------- 258
Query: 314 IDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVE 353
P+L+N + ++ R + L ++P+ER T ++++
Sbjct: 259 --PKLKNSHKVSPVLR--DFLERMLVRDPQERATAQELLD 294
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 103/231 (44%), Gaps = 34/231 (14%)
Query: 130 VVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGA 189
V HP+++ L+ S E + LV++ M L D L + L K I+
Sbjct: 156 VAGHPHIITLID--SYESSSFM--FLVFDLMRKGELFDYLTEKV--ALSEKETRSIMRSL 209
Query: 190 AEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTY 249
E +++LH +++RD K N+LLD N + +LSDFG + G+ + GT
Sbjct: 210 LEAVSFLHAN---NIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLR---ELCGTP 263
Query: 250 GYAAPEYIETGHLKS------QSDIWSFGVVLYEILTGR-RVLERNRPTMEQKLLEWVKQ 302
GY APE ++ ++ + D+W+ GV+L+ +L G R + M + ++E Q
Sbjct: 264 GYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQ 323
Query: 303 FPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVE 353
F + P ++ S V L L+ +PE R T Q ++
Sbjct: 324 FSS----------PEWDDRSST-----VKDLISRLLQVDPEARLTAEQALQ 359
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 92/205 (44%), Gaps = 21/205 (10%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGH---KQWLAEVQFLGVVSHPNL 136
+G+G FG+VY + +VA+K L ++ Q E++ + HPN+
Sbjct: 31 LGKGKFGNVYLAR-----EKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPNI 85
Query: 137 VKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYL 196
++L Y D R I L+ EY P L L + T + I+ A+ L Y
Sbjct: 86 LRLYNYFY--DRRRI--YLILEYAPRGELYKEL--QKSCTFDEQRTATIMEELADALMYC 139
Query: 197 HEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEY 256
H +VI+RD K N+LL + K++DFG + P+ + GT Y PE
Sbjct: 140 HGK---KVIHRDIKPENLLLGLKGELKIADFGWSVHAPSLR----RKTMCGTLDYLPPEM 192
Query: 257 IETGHLKSQSDIWSFGVVLYEILTG 281
IE + D+W GV+ YE+L G
Sbjct: 193 IEGRMHNEKVDLWCIGVLCYELLVG 217
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 48/91 (52%), Gaps = 4/91 (4%)
Query: 192 GLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGY 251
L YLH E V+YRD K N++LD + K++DFGL +EG T GT Y
Sbjct: 121 ALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT--MKXFCGTPEY 176
Query: 252 AAPEYIETGHLKSQSDIWSFGVVLYEILTGR 282
APE +E D W GVV+YE++ GR
Sbjct: 177 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 122/279 (43%), Gaps = 35/279 (12%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQ--FLGVV 131
F+ + IG G + V ++ D R + V K+L N W+ + F
Sbjct: 54 FDLLRVIGRGSYAKVLLVRLKKTD-RIYAMRVVKKELVND--DEDIDWVQTEKHVFEQAS 110
Query: 132 SHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAE 191
+HP LV L TE + V EY+ L + Q LP + +
Sbjct: 111 NHPFLVGLHSCFQTES----RLFFVIEYVNGGDL--MFHMQRQRKLPEEHARFYSAEISL 164
Query: 192 GLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREG-PTGDHTHVSTAVVGTYG 250
L YLHE +IYRD K NVLLD KL+D+G+ +EG GD T + GT
Sbjct: 165 ALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT---STFCGTPN 218
Query: 251 YAAPEYIETGHLKSQSDIWSFGVVLYEILTGRR----VLERNRPTMEQKLLEWVKQFPAD 306
Y APE + D W+ GV+++E++ GR V + P +Q +++
Sbjct: 219 YIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNP--DQNTEDYL------ 270
Query: 307 GKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEER 345
F ++++ ++R S++ + A + + L K+P+ER
Sbjct: 271 ---FQVILEKQIRIPRSLSV--KAASVLKSFLNKDPKER 304
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 48/91 (52%), Gaps = 4/91 (4%)
Query: 192 GLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGY 251
L YLH E V+YRD K N++LD + K++DFGL +EG T GT Y
Sbjct: 120 ALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT--MKXFCGTPEY 175
Query: 252 AAPEYIETGHLKSQSDIWSFGVVLYEILTGR 282
APE +E D W GVV+YE++ GR
Sbjct: 176 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 206
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 48/91 (52%), Gaps = 4/91 (4%)
Query: 192 GLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGY 251
L YLH E V+YRD K N++LD + K++DFGL +EG T GT Y
Sbjct: 122 ALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT--MKXFCGTPEY 177
Query: 252 AAPEYIETGHLKSQSDIWSFGVVLYEILTGR 282
APE +E D W GVV+YE++ GR
Sbjct: 178 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 208
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 120/277 (43%), Gaps = 31/277 (11%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSH 133
F+ + IG G + V ++ D R + V K+L N + F +H
Sbjct: 22 FDLLRVIGRGSYAKVLLVRLKKTD-RIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNH 80
Query: 134 PNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGL 193
P LV L TE + V EY+ L + Q LP + + L
Sbjct: 81 PFLVGLHSCFQTES----RLFFVIEYVNGGDL--MFHMQRQRKLPEEHARFYSAEISLAL 134
Query: 194 AYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREG-PTGDHTHVSTAVVGTYGYA 252
YLHE +IYRD K NVLLD KL+D+G+ +EG GD T + GT Y
Sbjct: 135 NYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT---SXFCGTPNYI 188
Query: 253 APEYIETGHLKSQSDIWSFGVVLYEILTGRR----VLERNRPTMEQKLLEWVKQFPADGK 308
APE + D W+ GV+++E++ GR V + P +Q +++
Sbjct: 189 APEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNP--DQNTEDYL-------- 238
Query: 309 KFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEER 345
F ++++ ++R S++ + A + + L K+P+ER
Sbjct: 239 -FQVILEKQIRIPRSMSV--KAASVLKSFLNKDPKER 272
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 99/208 (47%), Gaps = 24/208 (11%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKL 139
+G+G FG V + + G+ E V + K + L EVQ L + HPN++KL
Sbjct: 34 LGKGSFGEVILCKDK-ITGQ-ECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKL 91
Query: 140 LGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEG 199
+ +++G LV E L D + SR + + R II G+ Y+H+
Sbjct: 92 YEFF---EDKGY-FYLVGEVYTGGELFDEIISRKRFSEVDAAR--IIRQVLSGITYMHKN 145
Query: 200 LEIQVIYRDFKTSNVLLDGNFKP---KLSDFGLAREGPTGDHTHVSTAV---VGTYGYAA 253
++++RD K N+LL+ K ++ DFGL+ H S + +GT Y A
Sbjct: 146 ---KIVHRDLKPENLLLESKSKDANIRIIDFGLST------HFEASKKMKDKIGTAYYIA 196
Query: 254 PEYIETGHLKSQSDIWSFGVVLYEILTG 281
PE + G + D+WS GV+LY +L+G
Sbjct: 197 PEVLH-GTYDEKCDVWSTGVILYILLSG 223
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 98/222 (44%), Gaps = 21/222 (9%)
Query: 63 DMQELREATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGH---K 119
+M + + + F+ + +G+G FG+VY + ++A+K L L+
Sbjct: 5 EMPKRKFTIDDFDIVRPLGKGKFGNVYLAR-----EKQNKFIMALKVLFKSQLEKEGVEH 59
Query: 120 QWLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPW 179
Q E++ + HPN++++ Y D + I L+ E+ P L L +
Sbjct: 60 QLRREIEIQSHLRHPNILRMYNY--FHDRKRI--YLMLEFAPRGELYKELQKHGR--FDE 113
Query: 180 KTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHT 239
+ + A+ L Y HE +VI+RD K N+L+ + K++DFG + P+
Sbjct: 114 QRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLR-- 168
Query: 240 HVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTG 281
+ GT Y PE IE + D+W GV+ YE L G
Sbjct: 169 --RRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVG 208
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 93/213 (43%), Gaps = 23/213 (10%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGH--KQWLAEVQFLGVV 131
+N + +G+G FG V K R AVK +N + L EV+ L +
Sbjct: 24 YNIVCMLGKGSFGEVLKCKDRITQQE-----YAVKVINKASAKNKDTSTILREVELLKKL 78
Query: 132 SHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAE 191
HPN++KL ED +V E L D + R + + R II
Sbjct: 79 DHPNIMKLFEIL--EDSSSF--YIVGELYTGGELFDEIIKRKRFSEHDAAR--IIKQVFS 132
Query: 192 GLAYLHEGLEIQVIYRDFKTSNVLLDGNFKP---KLSDFGLAREGPTGDHTHVSTAVVGT 248
G+ Y+H+ +++RD K N+LL+ K K+ DFGL+ +GT
Sbjct: 133 GITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLS---TCFQQNTKMKDRIGT 186
Query: 249 YGYAAPEYIETGHLKSQSDIWSFGVVLYEILTG 281
Y APE + G + D+WS GV+LY +L+G
Sbjct: 187 AYYIAPEVLR-GTYDEKCDVWSAGVILYILLSG 218
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 103/217 (47%), Gaps = 23/217 (10%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKL----NNHGLQGHKQWLAEVQFLG 129
+ ++ KIGEG +G+V+K R +VA+K++ ++ G+ L E+ L
Sbjct: 4 YEKLEKIGEGTYGTVFKAK-----NRETHEIVALKRVRLDDDDEGVPSSA--LREICLLK 56
Query: 130 VVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGA 189
+ H N+V+L ++ + LV+E+ ++ L+ + F L + +
Sbjct: 57 ELKHKNIVRLHDVLHSDK----KLTLVFEFC-DQDLK-KYFDSCNGDLDPEIVKSFLFQL 110
Query: 190 AEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTY 249
+GL + H V++RD K N+L++ N + KL+DFGLAR G +A V T
Sbjct: 111 LKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLADFGLARA--FGIPVRCYSAEVVTL 165
Query: 250 GYAAPEYIETGHLKSQS-DIWSFGVVLYEILTGRRVL 285
Y P+ + L S S D+WS G + E+ R L
Sbjct: 166 WYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAARPL 202
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 119/275 (43%), Gaps = 27/275 (9%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSH 133
F+ + IG G + V ++ D R + V K+L N + F +H
Sbjct: 7 FDLLRVIGRGSYAKVLLVRLKKTD-RIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNH 65
Query: 134 PNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGL 193
P LV L TE + V EY+ L + Q LP + + L
Sbjct: 66 PFLVGLHSCFQTES----RLFFVIEYVNGGDL--MFHMQRQRKLPEEHARFYSAEISLAL 119
Query: 194 AYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGP-TGDHTHVSTAVVGTYGYA 252
YLHE +IYRD K NVLLD KL+D+G+ +EG GD T + GT Y
Sbjct: 120 NYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT---SXFCGTPNYI 173
Query: 253 APEYIETGHLKSQSDIWSFGVVLYEILTGRRVLE--RNRPTMEQKLLEWVKQFPADGKKF 310
APE + D W+ GV+++E++ GR + + +Q +++ F
Sbjct: 174 APEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYL---------F 224
Query: 311 SMMIDPRLRNQYSINAARRVAKLADNCLKKNPEER 345
++++ ++R S++ + A + + L K+P+ER
Sbjct: 225 QVILEKQIRIPRSLSV--KAASVLKSFLNKDPKER 257
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 92/204 (45%), Gaps = 16/204 (7%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLN-NHGLQGHKQWLAEVQFLGVVSHPNLVK 138
+GEG +G V R + VAVK ++ + + E+ +++H N+VK
Sbjct: 14 LGEGAYGEVQLAVNRVTEE-----AVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVK 68
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHE 198
G+ E IQ L + EY L DR+ P R L A G+ YLH
Sbjct: 69 FYGH---RREGNIQYLFL-EYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 122
Query: 199 GLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIE 258
I + +RD K N+LLD K+SDFGLA + + + GT Y APE ++
Sbjct: 123 ---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 259 TGHLKSQS-DIWSFGVVLYEILTG 281
++ D+WS G+VL +L G
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 92/204 (45%), Gaps = 16/204 (7%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLN-NHGLQGHKQWLAEVQFLGVVSHPNLVK 138
+GEG +G V R + VAVK ++ + + E+ +++H N+VK
Sbjct: 15 LGEGAYGEVQLAVNRVTEE-----AVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVK 69
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHE 198
G+ E IQ L + EY L DR+ P R L A G+ YLH
Sbjct: 70 FYGH---RREGNIQYLFL-EYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 123
Query: 199 GLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIE 258
I + +RD K N+LLD K+SDFGLA + + + GT Y APE ++
Sbjct: 124 ---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 259 TGHLKSQS-DIWSFGVVLYEILTG 281
++ D+WS G+VL +L G
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 127/283 (44%), Gaps = 45/283 (15%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKL 139
+G+G +G VY G R L + + +A+K++ + + E+ + H N+V+
Sbjct: 16 LGKGTYGIVYAG--RDLSNQ---VRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQY 70
Query: 140 LGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQP------TLPWKTRLEIILGAAEGL 193
LG S E G ++ + E +P SL L S+ P T+ + T+ +I+ EGL
Sbjct: 71 LGSFS---ENGFIKIFM-EQVPGGSLSALLRSKWGPLKDNEQTIGFYTK-QIL----EGL 121
Query: 194 AYLHEGLEIQVIYRDFKTSNVLLDG-NFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYA 252
YLH+ Q+++RD K NVL++ + K+SDFG ++ + GT Y
Sbjct: 122 KYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKR--LAGINPCTETFTGTLQYM 176
Query: 253 APEYIETG--HLKSQSDIWSFGVVLYEILTGR-RVLERNRPTMEQKLLEWVKQFPADGKK 309
APE I+ G +DIWS G + E+ TG+ E P Q + V F
Sbjct: 177 APEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEP---QAAMFKVGMFK----- 228
Query: 310 FSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVV 352
+ P + S A + K C + +P++R N ++
Sbjct: 229 ----VHPEIPESMSAEAKAFILK----CFEPDPDKRACANDLL 263
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 119/275 (43%), Gaps = 27/275 (9%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSH 133
F+ + IG G + V ++ D R + V K+L N + F +H
Sbjct: 11 FDLLRVIGRGSYAKVLLVRLKKTD-RIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNH 69
Query: 134 PNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGL 193
P LV L TE + V EY+ L + Q LP + + L
Sbjct: 70 PFLVGLHSCFQTES----RLFFVIEYVNGGDL--MFHMQRQRKLPEEHARFYSAEISLAL 123
Query: 194 AYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGP-TGDHTHVSTAVVGTYGYA 252
YLHE +IYRD K NVLLD KL+D+G+ +EG GD T + GT Y
Sbjct: 124 NYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT---SXFCGTPNYI 177
Query: 253 APEYIETGHLKSQSDIWSFGVVLYEILTGRRVLE--RNRPTMEQKLLEWVKQFPADGKKF 310
APE + D W+ GV+++E++ GR + + +Q +++ F
Sbjct: 178 APEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYL---------F 228
Query: 311 SMMIDPRLRNQYSINAARRVAKLADNCLKKNPEER 345
++++ ++R S++ + A + + L K+P+ER
Sbjct: 229 QVILEKQIRIPRSLSV--KAASVLKSFLNKDPKER 261
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 120/270 (44%), Gaps = 30/270 (11%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSH 133
F R+ IG G FG V ++ ++ + + K L+ + L E + L V+
Sbjct: 43 FERIKTIGTGSFGRVM--LVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 134 PNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRL---EIILGAA 190
P LVKL S +D + +V EY+P + L + + P R +I+L
Sbjct: 101 PFLVKL--EFSFKDNSNL--YMVMEYVPGGEMFSHLRRIGRFSEP-HARFYAAQIVLT-- 153
Query: 191 EGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAR--EGPTGDHTHVSTAVVGT 248
YLH + +IYRD K N+L+D K++DFG A+ +G T + GT
Sbjct: 154 --FEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRT-------WXLCGT 201
Query: 249 YGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPT-MEQKLLEWVKQFPADG 307
Y APE I + D W+ GV++YE+ G ++P + +K++ +FP+
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS-- 259
Query: 308 KKFSMMIDPRLRNQYSINAARRVAKLADNC 337
FS + LRN ++ +R L +
Sbjct: 260 -HFSSDLKDLLRNLLQVDLTKRFGNLKNGV 288
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 99/208 (47%), Gaps = 24/208 (11%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKL 139
+G+G FG V + + G+ E V + K + L EVQ L + HPN++KL
Sbjct: 57 LGKGSFGEVILCKDK-ITGQ-ECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKL 114
Query: 140 LGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEG 199
+ +++G LV E L D + SR + + R II G+ Y+H+
Sbjct: 115 YEFF---EDKGY-FYLVGEVYTGGELFDEIISRKRFSEVDAAR--IIRQVLSGITYMHKN 168
Query: 200 LEIQVIYRDFKTSNVLLDGNFKP---KLSDFGLAREGPTGDHTHVSTAV---VGTYGYAA 253
++++RD K N+LL+ K ++ DFGL+ H S + +GT Y A
Sbjct: 169 ---KIVHRDLKPENLLLESKSKDANIRIIDFGLST------HFEASKKMKDKIGTAYYIA 219
Query: 254 PEYIETGHLKSQSDIWSFGVVLYEILTG 281
PE + G + D+WS GV+LY +L+G
Sbjct: 220 PEVLH-GTYDEKCDVWSTGVILYILLSG 246
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 48/91 (52%), Gaps = 5/91 (5%)
Query: 192 GLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGY 251
L YLH V+YRD K N++LD + K++DFGL +EG + T GT Y
Sbjct: 120 ALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--MKTFCGTPEY 174
Query: 252 AAPEYIETGHLKSQSDIWSFGVVLYEILTGR 282
APE +E D W GVV+YE++ GR
Sbjct: 175 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 205
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 48/91 (52%), Gaps = 5/91 (5%)
Query: 192 GLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGY 251
L YLH V+YRD K N++LD + K++DFGL +EG + T GT Y
Sbjct: 117 ALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--MKTFCGTPEY 171
Query: 252 AAPEYIETGHLKSQSDIWSFGVVLYEILTGR 282
APE +E D W GVV+YE++ GR
Sbjct: 172 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 48/91 (52%), Gaps = 5/91 (5%)
Query: 192 GLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGY 251
L YLH V+YRD K N++LD + K++DFGL +EG + T GT Y
Sbjct: 117 ALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--MKTFCGTPEY 171
Query: 252 AAPEYIETGHLKSQSDIWSFGVVLYEILTGR 282
APE +E D W GVV+YE++ GR
Sbjct: 172 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 92/204 (45%), Gaps = 16/204 (7%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLN-NHGLQGHKQWLAEVQFLGVVSHPNLVK 138
+GEG +G V R + VAVK ++ + + E+ +++H N+VK
Sbjct: 14 LGEGAYGEVQLAVNRVTEE-----AVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHE 198
G+ E IQ L + EY L DR+ P R L A G+ YLH
Sbjct: 69 FYGH---RREGNIQYLFL-EYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 122
Query: 199 GLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIE 258
I + +RD K N+LLD K+SDFGLA + + + GT Y APE ++
Sbjct: 123 ---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 259 TGHLKSQS-DIWSFGVVLYEILTG 281
++ D+WS G+VL +L G
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 92/204 (45%), Gaps = 16/204 (7%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLN-NHGLQGHKQWLAEVQFLGVVSHPNLVK 138
+GEG +G V R + VAVK ++ + + E+ +++H N+VK
Sbjct: 13 LGEGAYGEVQLAVNRVTEE-----AVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 67
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHE 198
G+ E IQ L + EY L DR+ P R L A G+ YLH
Sbjct: 68 FYGH---RREGNIQYLFL-EYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 121
Query: 199 GLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIE 258
I + +RD K N+LLD K+SDFGLA + + + GT Y APE ++
Sbjct: 122 ---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 178
Query: 259 TGHLKSQS-DIWSFGVVLYEILTG 281
++ D+WS G+VL +L G
Sbjct: 179 RREFHAEPVDVWSCGIVLTAMLAG 202
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 120/270 (44%), Gaps = 30/270 (11%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSH 133
F R+ +G G FG V ++ ++ + + K L+ + L E + L V+
Sbjct: 43 FERIKTLGTGSFGRVM--LVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 134 PNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRL---EIILGAA 190
P LVKL S +D + +V EY+P + L + + P R +I+L
Sbjct: 101 PFLVKL--EFSFKDNSNL--YMVMEYVPGGEMFSHLRRIGRFSEP-HARFYAAQIVLT-- 153
Query: 191 EGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAR--EGPTGDHTHVSTAVVGT 248
YLH + +IYRD K N+L+D +++DFG A+ +G T + GT
Sbjct: 154 --FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW-------XLCGT 201
Query: 249 YGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPT-MEQKLLEWVKQFPADG 307
Y APE I + D W+ GV++YE+ G ++P + +K++ +FP+
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS-- 259
Query: 308 KKFSMMIDPRLRNQYSINAARRVAKLADNC 337
FS + LRN ++ +R L D
Sbjct: 260 -HFSSDLKDLLRNLLQVDLTKRFGNLKDGV 288
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 118/268 (44%), Gaps = 26/268 (9%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSH 133
F R+ +G G FG V ++ ++ + + K L+ + L E + L V+
Sbjct: 29 FERIKTLGTGSFGRVM--LVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 86
Query: 134 PNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRL---EIILGAA 190
P LVKL S +D + +V EY+P + L + + P R +I+L
Sbjct: 87 PFLVKL--EFSFKDNSNL--YMVMEYVPGGEMFSHLRRIGRFSEP-HARFYAAQIVLT-- 139
Query: 191 EGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYG 250
YLH + +IYRD K N+L+D +++DFG A+ T + GT
Sbjct: 140 --FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWT-----LCGTPE 189
Query: 251 YAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPT-MEQKLLEWVKQFPADGKK 309
Y APE I + D W+ GV++YE+ G ++P + +K++ +FP+
Sbjct: 190 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS---H 246
Query: 310 FSMMIDPRLRNQYSINAARRVAKLADNC 337
FS + LRN ++ +R L D
Sbjct: 247 FSSDLKDLLRNLLQVDLTKRFGNLKDGV 274
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 96/209 (45%), Gaps = 23/209 (11%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL---QGHKQWLAEVQFLGVVSHPNL 136
IG G FG V + + + V A+K L+ + + E + + P +
Sbjct: 83 IGRGAFGEV-----QLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWV 137
Query: 137 VKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYL 196
V+L +C+ +D++ + +V EYMP L + + + P W AE + L
Sbjct: 138 VQL--FCAFQDDKYL--YMVMEYMPGGDLVNLMSNYDVPE-KWAK-----FYTAEVVLAL 187
Query: 197 HEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEY 256
+ +I+RD K N+LLD + KL+DFG + H TA VGT Y +PE
Sbjct: 188 DAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTA-VGTPDYISPEV 246
Query: 257 IET----GHLKSQSDIWSFGVVLYEILTG 281
+++ G+ + D WS GV L+E+L G
Sbjct: 247 LKSQGGDGYYGRECDWWSVGVFLFEMLVG 275
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 48/91 (52%), Gaps = 5/91 (5%)
Query: 192 GLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGY 251
L YLH V+YRD K N++LD + K++DFGL +EG + T GT Y
Sbjct: 117 ALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--MKXFCGTPEY 171
Query: 252 AAPEYIETGHLKSQSDIWSFGVVLYEILTGR 282
APE +E D W GVV+YE++ GR
Sbjct: 172 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 92/204 (45%), Gaps = 16/204 (7%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLN-NHGLQGHKQWLAEVQFLGVVSHPNLVK 138
+GEG +G V R + VAVK ++ + + E+ +++H N+VK
Sbjct: 15 LGEGAYGEVQLAVNRVTEE-----AVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 69
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHE 198
G+ E IQ L + EY L DR+ P R L A G+ YLH
Sbjct: 70 FYGH---RREGNIQYLFL-EYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 123
Query: 199 GLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIE 258
I + +RD K N+LLD K+SDFGLA + + + GT Y APE ++
Sbjct: 124 ---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 259 TGHLKSQS-DIWSFGVVLYEILTG 281
++ D+WS G+VL +L G
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 48/91 (52%), Gaps = 5/91 (5%)
Query: 192 GLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGY 251
L YLH V+YRD K N++LD + K++DFGL +EG + T GT Y
Sbjct: 122 ALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--MKXFCGTPEY 176
Query: 252 AAPEYIETGHLKSQSDIWSFGVVLYEILTGR 282
APE +E D W GVV+YE++ GR
Sbjct: 177 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 48/91 (52%), Gaps = 5/91 (5%)
Query: 192 GLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGY 251
L YLH V+YRD K N++LD + K++DFGL +EG + T GT Y
Sbjct: 117 ALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--MKXFCGTPEY 171
Query: 252 AAPEYIETGHLKSQSDIWSFGVVLYEILTGR 282
APE +E D W GVV+YE++ GR
Sbjct: 172 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 99/208 (47%), Gaps = 24/208 (11%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKL 139
+G+G FG V + + G+ E V + K + L EVQ L + HPN++KL
Sbjct: 58 LGKGSFGEVILCKDK-ITGQ-ECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKL 115
Query: 140 LGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEG 199
+ +++G LV E L D + SR + + R II G+ Y+H+
Sbjct: 116 YEFF---EDKGY-FYLVGEVYTGGELFDEIISRKRFSEVDAAR--IIRQVLSGITYMHKN 169
Query: 200 LEIQVIYRDFKTSNVLLDGNFKP---KLSDFGLAREGPTGDHTHVSTAV---VGTYGYAA 253
++++RD K N+LL+ K ++ DFGL+ H S + +GT Y A
Sbjct: 170 ---KIVHRDLKPENLLLESKSKDANIRIIDFGLST------HFEASKKMKDKIGTAYYIA 220
Query: 254 PEYIETGHLKSQSDIWSFGVVLYEILTG 281
PE + G + D+WS GV+LY +L+G
Sbjct: 221 PEVLH-GTYDEKCDVWSTGVILYILLSG 247
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 48/91 (52%), Gaps = 5/91 (5%)
Query: 192 GLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGY 251
L YLH V+YRD K N++LD + K++DFGL +EG + T GT Y
Sbjct: 117 ALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--MKXFCGTPEY 171
Query: 252 AAPEYIETGHLKSQSDIWSFGVVLYEILTGR 282
APE +E D W GVV+YE++ GR
Sbjct: 172 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 98/208 (47%), Gaps = 24/208 (11%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKL 139
+G+G FG V + + G+ E V + K + L EVQ L + HPN++KL
Sbjct: 40 LGKGSFGEVILCKDK-ITGQ-ECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKL 97
Query: 140 LGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEG 199
Y ED+ LV E L D + SR + + R II G+ Y+H+
Sbjct: 98 --YEFFEDKGYF--YLVGEVYTGGELFDEIISRKRFSEVDAAR--IIRQVLSGITYMHKN 151
Query: 200 LEIQVIYRDFKTSNVLLDGNFKP---KLSDFGLAREGPTGDHTHVSTAV---VGTYGYAA 253
++++RD K N+LL+ K ++ DFGL+ H S + +GT Y A
Sbjct: 152 ---KIVHRDLKPENLLLESKSKDANIRIIDFGLST------HFEASKKMKDKIGTAYYIA 202
Query: 254 PEYIETGHLKSQSDIWSFGVVLYEILTG 281
PE + G + D+WS GV+LY +L+G
Sbjct: 203 PEVLH-GTYDEKCDVWSTGVILYILLSG 229
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 92/204 (45%), Gaps = 16/204 (7%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLN-NHGLQGHKQWLAEVQFLGVVSHPNLVK 138
+GEG +G V R + VAVK ++ + + E+ +++H N+VK
Sbjct: 14 LGEGAYGEVQLAVNRVTEE-----AVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHE 198
G+ E IQ L + EY L DR+ P R L A G+ YLH
Sbjct: 69 FYGH---RREGNIQYLFL-EYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 122
Query: 199 GLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIE 258
I + +RD K N+LLD K+SDFGLA + + + GT Y APE ++
Sbjct: 123 ---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 259 TGHLKSQS-DIWSFGVVLYEILTG 281
++ D+WS G+VL +L G
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 92/204 (45%), Gaps = 16/204 (7%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLN-NHGLQGHKQWLAEVQFLGVVSHPNLVK 138
+GEG +G V R + VAVK ++ + + E+ +++H N+VK
Sbjct: 14 LGEGAYGEVQLAVNRVTEE-----AVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHE 198
G+ E IQ L + EY L DR+ P R L A G+ YLH
Sbjct: 69 FYGH---RREGNIQYLFL-EYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 122
Query: 199 GLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIE 258
I + +RD K N+LLD K+SDFGLA + + + GT Y APE ++
Sbjct: 123 ---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 259 TGHLKSQS-DIWSFGVVLYEILTG 281
++ D+WS G+VL +L G
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 92/204 (45%), Gaps = 16/204 (7%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLN-NHGLQGHKQWLAEVQFLGVVSHPNLVK 138
+GEG +G V R + VAVK ++ + + E+ +++H N+VK
Sbjct: 14 LGEGAYGEVQLAVNRVTEE-----AVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHE 198
G+ E IQ L + EY L DR+ P R L A G+ YLH
Sbjct: 69 FYGH---RREGNIQYLFL-EYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 122
Query: 199 GLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIE 258
I + +RD K N+LLD K+SDFGLA + + + GT Y APE ++
Sbjct: 123 ---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 259 TGHLKSQS-DIWSFGVVLYEILTG 281
++ D+WS G+VL +L G
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 92/204 (45%), Gaps = 16/204 (7%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLN-NHGLQGHKQWLAEVQFLGVVSHPNLVK 138
+GEG +G V R + VAVK ++ + + E+ +++H N+VK
Sbjct: 15 LGEGAYGEVQLAVNRVTEE-----AVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 69
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHE 198
G+ E IQ L + EY L DR+ P R L A G+ YLH
Sbjct: 70 FYGH---RREGNIQYLFL-EYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 123
Query: 199 GLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIE 258
I + +RD K N+LLD K+SDFGLA + + + GT Y APE ++
Sbjct: 124 ---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 259 TGHLKSQS-DIWSFGVVLYEILTG 281
++ D+WS G+VL +L G
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 92/204 (45%), Gaps = 16/204 (7%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLN-NHGLQGHKQWLAEVQFLGVVSHPNLVK 138
+GEG +G V R + VAVK ++ + + E+ +++H N+VK
Sbjct: 15 LGEGAYGEVQLAVNRVTEE-----AVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 69
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHE 198
G+ E IQ L + EY L DR+ P R L A G+ YLH
Sbjct: 70 FYGH---RREGNIQYLFL-EYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 123
Query: 199 GLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIE 258
I + +RD K N+LLD K+SDFGLA + + + GT Y APE ++
Sbjct: 124 ---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 259 TGHLKSQS-DIWSFGVVLYEILTG 281
++ D+WS G+VL +L G
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 92/204 (45%), Gaps = 16/204 (7%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLN-NHGLQGHKQWLAEVQFLGVVSHPNLVK 138
+GEG +G V R + VAVK ++ + + E+ +++H N+VK
Sbjct: 15 LGEGAYGEVQLAVNRVTEE-----AVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 69
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHE 198
G+ E IQ L + EY L DR+ P R L A G+ YLH
Sbjct: 70 FYGH---RREGNIQYLFL-EYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 123
Query: 199 GLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIE 258
I + +RD K N+LLD K+SDFGLA + + + GT Y APE ++
Sbjct: 124 ---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 259 TGHLKSQS-DIWSFGVVLYEILTG 281
++ D+WS G+VL +L G
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 92/204 (45%), Gaps = 16/204 (7%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLN-NHGLQGHKQWLAEVQFLGVVSHPNLVK 138
+GEG +G V R + VAVK ++ + + E+ +++H N+VK
Sbjct: 14 LGEGAYGEVQLAVNRVTEE-----AVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVK 68
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHE 198
G+ E IQ L + EY L DR+ P R L A G+ YLH
Sbjct: 69 FYGH---RREGNIQYLFL-EYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 122
Query: 199 GLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIE 258
I + +RD K N+LLD K+SDFGLA + + + GT Y APE ++
Sbjct: 123 ---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLK 179
Query: 259 TGHLKSQS-DIWSFGVVLYEILTG 281
++ D+WS G+VL +L G
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 92/204 (45%), Gaps = 16/204 (7%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLN-NHGLQGHKQWLAEVQFLGVVSHPNLVK 138
+GEG +G V R + VAVK ++ + + E+ +++H N+VK
Sbjct: 14 LGEGAYGEVQLAVNRVTEE-----AVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHE 198
G+ E IQ L + EY L DR+ P R L A G+ YLH
Sbjct: 69 FYGH---RREGNIQYLFL-EYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 122
Query: 199 GLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIE 258
I + +RD K N+LLD K+SDFGLA + + + GT Y APE ++
Sbjct: 123 ---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 259 TGHLKSQS-DIWSFGVVLYEILTG 281
++ D+WS G+VL +L G
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 92/204 (45%), Gaps = 16/204 (7%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLN-NHGLQGHKQWLAEVQFLGVVSHPNLVK 138
+GEG +G V R + VAVK ++ + + E+ +++H N+VK
Sbjct: 15 LGEGAYGEVQLAVNRVTEE-----AVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 69
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHE 198
G+ E IQ L + EY L DR+ P R L A G+ YLH
Sbjct: 70 FYGH---RREGNIQYLFL-EYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 123
Query: 199 GLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIE 258
I + +RD K N+LLD K+SDFGLA + + + GT Y APE ++
Sbjct: 124 ---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 259 TGHLKSQS-DIWSFGVVLYEILTG 281
++ D+WS G+VL +L G
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 92/204 (45%), Gaps = 16/204 (7%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLN-NHGLQGHKQWLAEVQFLGVVSHPNLVK 138
+GEG +G V R + VAVK ++ + + E+ +++H N+VK
Sbjct: 15 LGEGAYGEVQLAVNRVTEE-----AVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 69
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHE 198
G+ E IQ L + EY L DR+ P R L A G+ YLH
Sbjct: 70 FYGH---RREGNIQYLFL-EYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 123
Query: 199 GLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIE 258
I + +RD K N+LLD K+SDFGLA + + + GT Y APE ++
Sbjct: 124 ---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 259 TGHLKSQS-DIWSFGVVLYEILTG 281
++ D+WS G+VL +L G
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 92/204 (45%), Gaps = 16/204 (7%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLN-NHGLQGHKQWLAEVQFLGVVSHPNLVK 138
+GEG +G V R + VAVK ++ + + E+ +++H N+VK
Sbjct: 14 LGEGAYGEVQLAVNRVTEE-----AVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHE 198
G+ E IQ L + EY L DR+ P R L A G+ YLH
Sbjct: 69 FYGH---RREGNIQYLFL-EYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 122
Query: 199 GLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIE 258
I + +RD K N+LLD K+SDFGLA + + + GT Y APE ++
Sbjct: 123 ---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 259 TGHLKSQS-DIWSFGVVLYEILTG 281
++ D+WS G+VL +L G
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 119/286 (41%), Gaps = 54/286 (18%)
Query: 73 GFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVS 132
GF + +I + V+ G I P +P ++ E+ ++
Sbjct: 27 GFAKCFEISDADTKEVFAGKIVPKSLLLKP-------------HQREKMSMEISIHRSLA 73
Query: 133 HPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSL---EDRLFSRAQPTLPWKTRLEIILGA 189
H ++V G+ D +V E RSL R + +P + R +I+LG
Sbjct: 74 HQHVVGFHGFFEDND----FVFVVLELCRRRSLLELHKRRKALTEPEARYYLR-QIVLGC 128
Query: 190 AEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGP-TGDHTHVSTAVVGT 248
YLH +VI+RD K N+ L+ + + K+ DFGLA + G+ V + GT
Sbjct: 129 Q----YLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV---LCGT 178
Query: 249 YGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGK 308
Y APE + + D+WS G ++Y +L G +P E L K
Sbjct: 179 PNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVG-------KPPFETSCL----------K 221
Query: 309 KFSMMIDPRLRNQYSI--NAARRVAKLADNCLKKNPEERPTMNQVV 352
+ + I +N+YSI + A L L+ +P RPT+N+++
Sbjct: 222 ETYLRIK---KNEYSIPKHINPVAASLIQKMLQTDPTARPTINELL 264
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 92/204 (45%), Gaps = 16/204 (7%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLN-NHGLQGHKQWLAEVQFLGVVSHPNLVK 138
+GEG +G V R + VAVK ++ + + E+ +++H N+VK
Sbjct: 15 LGEGAYGEVQLAVNRVTEE-----AVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVK 69
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHE 198
G+ E IQ L + EY L DR+ P R L A G+ YLH
Sbjct: 70 FYGH---RREGNIQYLFL-EYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 123
Query: 199 GLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIE 258
I + +RD K N+LLD K+SDFGLA + + + GT Y APE ++
Sbjct: 124 ---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLK 180
Query: 259 TGHLKSQS-DIWSFGVVLYEILTG 281
++ D+WS G+VL +L G
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 119/286 (41%), Gaps = 54/286 (18%)
Query: 73 GFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVS 132
GF + +I + V+ G I P +P ++ E+ ++
Sbjct: 51 GFAKCFEISDADTKEVFAGKIVPKSLLLKP-------------HQREKMSMEISIHRSLA 97
Query: 133 HPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSL---EDRLFSRAQPTLPWKTRLEIILGA 189
H ++V G+ D +V E RSL R + +P + R +I+LG
Sbjct: 98 HQHVVGFHGFFEDND----FVFVVLELCRRRSLLELHKRRKALTEPEARYYLR-QIVLGC 152
Query: 190 AEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGP-TGDHTHVSTAVVGT 248
YLH +VI+RD K N+ L+ + + K+ DFGLA + G+ V + GT
Sbjct: 153 Q----YLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV---LCGT 202
Query: 249 YGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGK 308
Y APE + + D+WS G ++Y +L G +P E L K
Sbjct: 203 PNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVG-------KPPFETSCL----------K 245
Query: 309 KFSMMIDPRLRNQYSI--NAARRVAKLADNCLKKNPEERPTMNQVV 352
+ + I +N+YSI + A L L+ +P RPT+N+++
Sbjct: 246 ETYLRIK---KNEYSIPKHINPVAASLIQKMLQTDPTARPTINELL 288
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 92/204 (45%), Gaps = 16/204 (7%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLN-NHGLQGHKQWLAEVQFLGVVSHPNLVK 138
+GEG +G V R + VAVK ++ + + E+ +++H N+VK
Sbjct: 14 LGEGAYGEVQLAVNRVTEE-----AVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHE 198
G+ E IQ L + EY L DR+ P R L A G+ YLH
Sbjct: 69 FYGH---RREGNIQYLFL-EYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 122
Query: 199 GLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIE 258
I + +RD K N+LLD K+SDFGLA + + + GT Y APE ++
Sbjct: 123 ---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLK 179
Query: 259 TGHLKSQS-DIWSFGVVLYEILTG 281
++ D+WS G+VL +L G
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 119/286 (41%), Gaps = 54/286 (18%)
Query: 73 GFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVS 132
GF + +I + V+ G I P +P ++ E+ ++
Sbjct: 53 GFAKCFEISDADTKEVFAGKIVPKSLLLKP-------------HQREKMSMEISIHRSLA 99
Query: 133 HPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSL---EDRLFSRAQPTLPWKTRLEIILGA 189
H ++V G+ D +V E RSL R + +P + R +I+LG
Sbjct: 100 HQHVVGFHGFFEDND----FVFVVLELCRRRSLLELHKRRKALTEPEARYYLR-QIVLGC 154
Query: 190 AEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGP-TGDHTHVSTAVVGT 248
YLH +VI+RD K N+ L+ + + K+ DFGLA + G+ V + GT
Sbjct: 155 Q----YLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV---LCGT 204
Query: 249 YGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGK 308
Y APE + + D+WS G ++Y +L G +P E L K
Sbjct: 205 PNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVG-------KPPFETSCL----------K 247
Query: 309 KFSMMIDPRLRNQYSI--NAARRVAKLADNCLKKNPEERPTMNQVV 352
+ + I +N+YSI + A L L+ +P RPT+N+++
Sbjct: 248 ETYLRIK---KNEYSIPKHINPVAASLIQKMLQTDPTARPTINELL 290
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 120/270 (44%), Gaps = 30/270 (11%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSH 133
F R+ +G G FG V ++ ++ + + K L+ + L E + L V+
Sbjct: 43 FERIKTLGTGSFGRVM--LVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNF 100
Query: 134 PNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRL---EIILGAA 190
P LVKL S +D + +V EY P + L + + P R +I+L
Sbjct: 101 PFLVKL--EFSFKDNSNL--YMVMEYAPGGEMFSHLRRIGRFSEP-HARFYAAQIVLT-- 153
Query: 191 EGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAR--EGPTGDHTHVSTAVVGT 248
YLH + +IYRD K N+++D K++DFGLA+ +G T + GT
Sbjct: 154 --FEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGRT-------WXLCGT 201
Query: 249 YGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPT-MEQKLLEWVKQFPADG 307
Y APE I + D W+ GV++YE+ G ++P + +K++ +FP+
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS-- 259
Query: 308 KKFSMMIDPRLRNQYSINAARRVAKLADNC 337
FS + LRN ++ +R L +
Sbjct: 260 -HFSSDLKDLLRNLLQVDLTKRFGNLKNGV 288
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 92/204 (45%), Gaps = 16/204 (7%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLN-NHGLQGHKQWLAEVQFLGVVSHPNLVK 138
+GEG +G V R + VAVK ++ + + E+ +++H N+VK
Sbjct: 14 LGEGAYGEVQLAVNRVTEE-----AVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHE 198
G+ E IQ L + EY L DR+ P R L A G+ YLH
Sbjct: 69 FYGH---RREGNIQYLFL-EYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 122
Query: 199 GLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIE 258
I + +RD K N+LLD K+SDFGLA + + + GT Y APE ++
Sbjct: 123 ---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLK 179
Query: 259 TGHLKSQS-DIWSFGVVLYEILTG 281
++ D+WS G+VL +L G
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 98/234 (41%), Gaps = 46/234 (19%)
Query: 69 EATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNN--HGLQGHKQWLAEVQ 126
E + + +G G +GSV D + L VAVKKL+ + K+ E++
Sbjct: 19 EVPERYQNLSPVGSGAYGSVCAA----FDTKT-GLRVAVKKLSRPFQSIIHAKRTYRELR 73
Query: 127 FLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLED--------RLFSRAQPTLP 178
L + H N++ LL + P RSLE+ L +
Sbjct: 74 LLKHMKHENVIGLLDV----------------FTPARSLEEFNDVYLVTHLMGADLNNIV 117
Query: 179 WKTRLE------IILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLARE 232
+L +I GL Y+H +I+RD K SN+ ++ + + K+ DFGLAR
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 174
Query: 233 GPTGDHTHVSTAVVGTYGYAAPE-YIETGHLKSQSDIWSFGVVLYEILTGRRVL 285
T D T V T Y APE + H DIWS G ++ E+LTGR +
Sbjct: 175 --TDDEM---TGYVATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 99/225 (44%), Gaps = 31/225 (13%)
Query: 73 GFNRMLKI-GEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGV- 130
G ++L+I G FG V+K + VAVK LQ + W +E +
Sbjct: 15 GSLQLLEIKARGRFGCVWKAQLMND-------FVAVKIFP---LQDKQSWQSEREIFSTP 64
Query: 131 -VSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGA 189
+ H NL++ + ++ L+ + SL D L + W +
Sbjct: 65 GMKHENLLQFIAAEKRGSNLEVELWLITAFHDKGSLTDYLKGN---IITWNELCHVAETM 121
Query: 190 AEGLAYLHE--------GLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHV 241
+ GL+YLHE G + + +RDFK+ NVLL + L+DFGLA G
Sbjct: 122 SRGLSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGD 181
Query: 242 STAVVGTYGYAAPEYIETGHLKSQS------DIWSFGVVLYEILT 280
+ VGT Y APE +E G + Q D+++ G+VL+E+++
Sbjct: 182 THGQVGTRRYMAPEVLE-GAINFQRDAFLRIDMYAMGLVLWELVS 225
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 97/215 (45%), Gaps = 24/215 (11%)
Query: 81 GEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKLL 140
G+G FG+V G + + VA+KK+ +++ L +Q L V+ HPN+V+L
Sbjct: 32 GQGTFGTVQLGK-----EKSTGMSVAIKKVIQDPRFRNRE-LQIMQDLAVLHHPNIVQLQ 85
Query: 141 GYCST---EDERGIQRLLVYEYMPN---RSLEDRLFSRAQPTLPWKTRLEIILGAAEGLA 194
Y T D R I +V EY+P+ R R + R Q P + +
Sbjct: 86 SYFYTLGERDRRDIYLNVVMEYVPDTLHRCC--RNYYRRQVAPPPILIKVFLFQLIRSIG 143
Query: 195 YLHEGLEIQVIYRDFKTSNVLL---DGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGY 251
LH + V +RD K NVL+ DG KL DFG A++ + + A + + Y
Sbjct: 144 CLHLP-SVNVCHRDIKPHNVLVNEADGTL--KLCDFGSAKKLSPSE---PNVAYICSRYY 197
Query: 252 AAPEYI-ETGHLKSQSDIWSFGVVLYEILTGRRVL 285
APE I H + DIWS G + E++ G +
Sbjct: 198 RAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIF 232
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 97/222 (43%), Gaps = 21/222 (9%)
Query: 63 DMQELREATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGH---K 119
+M + + + F+ +G+G FG+VY + ++A+K L L+
Sbjct: 6 EMPKRKFTIDDFDIGRPLGKGKFGNVYLAR-----EKQNKFIMALKVLFKSQLEKEGVEH 60
Query: 120 QWLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPW 179
Q E++ + HPN++++ Y D + I L+ E+ P L L +
Sbjct: 61 QLRREIEIQSHLRHPNILRMYNY--FHDRKRI--YLMLEFAPRGELYKELQKHGR--FDE 114
Query: 180 KTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHT 239
+ + A+ L Y HE +VI+RD K N+L+ + K++DFG + P+
Sbjct: 115 QRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLR-- 169
Query: 240 HVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTG 281
+ GT Y PE IE + D+W GV+ YE L G
Sbjct: 170 --RRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVG 209
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 97/222 (43%), Gaps = 21/222 (9%)
Query: 63 DMQELREATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGH---K 119
+M + + + F+ +G+G FG+VY + ++A+K L L+
Sbjct: 5 EMPKRKFTIDDFDIGRPLGKGKFGNVYLAR-----EKQNKFIMALKVLFKSQLEKEGVEH 59
Query: 120 QWLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPW 179
Q E++ + HPN++++ Y D + I L+ E+ P L L +
Sbjct: 60 QLRREIEIQSHLRHPNILRMYNY--FHDRKRI--YLMLEFAPRGELYKELQKHGR--FDE 113
Query: 180 KTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHT 239
+ + A+ L Y HE +VI+RD K N+L+ + K++DFG + P+
Sbjct: 114 QRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLR-- 168
Query: 240 HVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTG 281
+ GT Y PE IE + D+W GV+ YE L G
Sbjct: 169 --RRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVG 208
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 105/254 (41%), Gaps = 25/254 (9%)
Query: 68 REATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL---QGHKQWLAE 124
R FN ++ +G+G FG V + +G + AVK L + + + E
Sbjct: 337 RMKLTDFNFLMVLGKGSFGKVMLS-----ERKGTDELYAVKILKKDVVIQDDDVECTMVE 391
Query: 125 VQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLE 184
+ L + P + L C +R V EY+ L + + P
Sbjct: 392 KRVLALPGKPPFLTQLHSCFQTMDR---LYFVMEYVNGGDLMYHIQQVGRFKEP-----H 443
Query: 185 IILGAAE---GLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHV 241
+ AAE GL +L +IYRD K NV+LD K++DFG+ +E T
Sbjct: 444 AVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVT-- 498
Query: 242 STAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLE-RNRPTMEQKLLEWV 300
+ GT Y APE I D W+FGV+LYE+L G+ E + + Q ++E
Sbjct: 499 TKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHN 558
Query: 301 KQFPADGKKFSMMI 314
+P K ++ I
Sbjct: 559 VAYPKSMSKEAVAI 572
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 93/213 (43%), Gaps = 23/213 (10%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGH--KQWLAEVQFLGVV 131
+N + +G+G FG V K R AVK +N + L EV+ L +
Sbjct: 24 YNIVCMLGKGSFGEVLKCKDRITQQE-----YAVKVINKASAKNKDTSTILREVELLKKL 78
Query: 132 SHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAE 191
HPN++KL ED +V E L D + R + + R II
Sbjct: 79 DHPNIMKLFEI--LEDSSSF--YIVGELYTGGELFDEIIKRKRFSEHDAAR--IIKQVFS 132
Query: 192 GLAYLHEGLEIQVIYRDFKTSNVLLDGNFKP---KLSDFGLAREGPTGDHTHVSTAVVGT 248
G+ Y+H+ +++RD K N+LL+ K K+ DFGL+ +GT
Sbjct: 133 GITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLS---TCFQQNTKMKDRIGT 186
Query: 249 YGYAAPEYIETGHLKSQSDIWSFGVVLYEILTG 281
Y APE + G + D+WS GV+LY +L+G
Sbjct: 187 AYYIAPEVLR-GTYDEKCDVWSAGVILYILLSG 218
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 116/285 (40%), Gaps = 52/285 (18%)
Query: 73 GFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVS 132
GF + +I + V+ G I P +P ++ E+ ++
Sbjct: 29 GFAKCFEISDADTKEVFAGKIVPKSLLLKP-------------HQREKMSMEISIHRSLA 75
Query: 133 HPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSL---EDRLFSRAQPTLPWKTRLEIILGA 189
H ++V G+ D +V E RSL R + +P + R +I+LG
Sbjct: 76 HQHVVGFHGFFEDND----FVFVVLELCRRRSLLELHKRRKALTEPEARYYLR-QIVLGC 130
Query: 190 AEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTY 249
YLH +VI+RD K N+ L+ + + K+ DFGLA + + GT
Sbjct: 131 Q----YLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER--KKTLCGTP 181
Query: 250 GYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKK 309
Y APE + + D+WS G ++Y +L G +P E L K+
Sbjct: 182 NYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVG-------KPPFETSCL----------KE 224
Query: 310 FSMMIDPRLRNQYSI--NAARRVAKLADNCLKKNPEERPTMNQVV 352
+ I +N+YSI + A L L+ +P RPT+N+++
Sbjct: 225 TYLRIK---KNEYSIPKHINPVAASLIQKMLQTDPTARPTINELL 266
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 106/235 (45%), Gaps = 32/235 (13%)
Query: 124 EVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRL 183
E+ L +SHPN++KL T E LV E + L DR+ + + +
Sbjct: 98 EIGVLLRLSHPNIIKLKEIFETPTEIS----LVLELVTGGELFDRIVEKGYYSE--RDAA 151
Query: 184 EIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDG---NFKPKLSDFGLAREGPTGDHTH 240
+ + E +AYLHE +++RD K N+L + K++DFGL++ +H
Sbjct: 152 DAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGLSK---IVEHQV 205
Query: 241 VSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVL--ERNRPTMEQKLLE 298
+ V GT GY APE + + D+WS G++ Y +L G ER M +++L
Sbjct: 206 LMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILN 265
Query: 299 WVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVE 353
F I P ++ S+NA V KL + +P++R T Q ++
Sbjct: 266 CEYYF----------ISP-WWDEVSLNAKDLVRKL----IVLDPKKRLTTFQALQ 305
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 104/253 (41%), Gaps = 23/253 (9%)
Query: 68 REATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL---QGHKQWLAE 124
R FN ++ +G+G FG V + +G + AVK L + + + E
Sbjct: 16 RMKLTDFNFLMVLGKGSFGKVMLS-----ERKGTDELYAVKILKKDVVIQDDDVECTMVE 70
Query: 125 VQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLE 184
+ L + P + L C +R V EY+ L Q +K
Sbjct: 71 KRVLALPGKPPFLTQLHSCFQTMDR---LYFVMEYVNGGDL----MYHIQQVGRFKEPHA 123
Query: 185 IILGA--AEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVS 242
+ A A GL +L +IYRD K NV+LD K++DFG+ +E T +
Sbjct: 124 VFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVT--T 178
Query: 243 TAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLE-RNRPTMEQKLLEWVK 301
GT Y APE I D W+FGV+LYE+L G+ E + + Q ++E
Sbjct: 179 KXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNV 238
Query: 302 QFPADGKKFSMMI 314
+P K ++ I
Sbjct: 239 AYPKSMSKEAVAI 251
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 92/204 (45%), Gaps = 16/204 (7%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLN-NHGLQGHKQWLAEVQFLGVVSHPNLVK 138
+GEG +G V R + VAVK ++ + + E+ +++H N+VK
Sbjct: 14 LGEGAYGEVQLAVNRVTEE-----AVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHE 198
G+ E IQ L + EY L DR+ P R L A G+ YLH
Sbjct: 69 FYGH---RREGNIQYLFL-EYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 122
Query: 199 GLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIE 258
I + +RD K N+LLD K+SDFGLA + + + GT Y APE ++
Sbjct: 123 ---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLK 179
Query: 259 TGHLKSQS-DIWSFGVVLYEILTG 281
++ D+WS G+VL +L G
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 93/213 (43%), Gaps = 23/213 (10%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGH--KQWLAEVQFLGVV 131
+N + +G+G FG V K R AVK +N + L EV+ L +
Sbjct: 24 YNIVCMLGKGSFGEVLKCKDRITQQE-----YAVKVINKASAKNKDTSTILREVELLKKL 78
Query: 132 SHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAE 191
HPN++KL ED +V E L D + R + + R II
Sbjct: 79 DHPNIMKLFEI--LEDSSSF--YIVGELYTGGELFDEIIKRKRFSEHDAAR--IIKQVFS 132
Query: 192 GLAYLHEGLEIQVIYRDFKTSNVLLDGNFKP---KLSDFGLAREGPTGDHTHVSTAVVGT 248
G+ Y+H+ +++RD K N+LL+ K K+ DFGL+ +GT
Sbjct: 133 GITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLS---TCFQQNTKMKDRIGT 186
Query: 249 YGYAAPEYIETGHLKSQSDIWSFGVVLYEILTG 281
Y APE + G + D+WS GV+LY +L+G
Sbjct: 187 AYYIAPEVLR-GTYDEKCDVWSAGVILYILLSG 218
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 118/285 (41%), Gaps = 52/285 (18%)
Query: 73 GFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVS 132
GF + +I + V+ G I P +P ++ E+ ++
Sbjct: 33 GFAKCFEISDADTKEVFAGKIVPKSLLLKP-------------HQREKMSMEISIHRSLA 79
Query: 133 HPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSL---EDRLFSRAQPTLPWKTRLEIILGA 189
H ++V G+ ED + +V E RSL R + +P + R +I+LG
Sbjct: 80 HQHVVGFHGF--FEDNDFV--FVVLELCRRRSLLELHKRRKALTEPEARYYLR-QIVLGC 134
Query: 190 AEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTY 249
YLH +VI+RD K N+ L+ + + K+ DFGLA + + GT
Sbjct: 135 Q----YLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER--KKTLCGTP 185
Query: 250 GYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKK 309
Y APE + + D+WS G ++Y +L G +P E L K+
Sbjct: 186 NYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVG-------KPPFETSCL----------KE 228
Query: 310 FSMMIDPRLRNQYSI--NAARRVAKLADNCLKKNPEERPTMNQVV 352
+ I +N+YSI + A L L+ +P RPT+N+++
Sbjct: 229 TYLRIK---KNEYSIPKHINPVAASLIQKMLQTDPTARPTINELL 270
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 103/222 (46%), Gaps = 35/222 (15%)
Query: 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL---QGHKQWLAEVQFL 128
N F+ IG GGFG VY G + G+ + A+K L+ + QG L E L
Sbjct: 189 NDFSVHRIIGRGGFGEVY-GCRKADTGK----MYAMKCLDKKRIKMKQGETLALNERIML 243
Query: 129 GVVSH---PNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRL-----FSRAQPTLPWK 180
+VS P +V + T D+ + + M L L FS A
Sbjct: 244 SLVSTGDCPFIVCMSYAFHTPDKLS----FILDLMNGGDLHYHLSQHGVFSEADMRF--- 296
Query: 181 TRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTH 240
EIILG L ++H V+YRD K +N+LLD + ++SD GLA + + H
Sbjct: 297 YAAEIILG----LEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDF-SKKKPH 348
Query: 241 VSTAVVGTYGYAAPEYIETG-HLKSQSDIWSFGVVLYEILTG 281
S VGT+GY APE ++ G S +D +S G +L+++L G
Sbjct: 349 AS---VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 103/222 (46%), Gaps = 35/222 (15%)
Query: 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL---QGHKQWLAEVQFL 128
N F+ IG GGFG VY G + G+ + A+K L+ + QG L E L
Sbjct: 189 NDFSVHRIIGRGGFGEVY-GCRKADTGK----MYAMKCLDKKRIKMKQGETLALNERIML 243
Query: 129 GVVSH---PNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRL-----FSRAQPTLPWK 180
+VS P +V + T D+ + + M L L FS A
Sbjct: 244 SLVSTGDCPFIVCMSYAFHTPDKLS----FILDLMNGGDLHYHLSQHGVFSEADMRF--- 296
Query: 181 TRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTH 240
EIILG L ++H V+YRD K +N+LLD + ++SD GLA + + H
Sbjct: 297 YAAEIILG----LEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDF-SKKKPH 348
Query: 241 VSTAVVGTYGYAAPEYIETG-HLKSQSDIWSFGVVLYEILTG 281
S VGT+GY APE ++ G S +D +S G +L+++L G
Sbjct: 349 AS---VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 98/234 (41%), Gaps = 46/234 (19%)
Query: 69 EATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNN--HGLQGHKQWLAEVQ 126
E + + +G G +GSV D + L VAVKKL+ + K+ E++
Sbjct: 26 EVPERYQNLSPVGSGAYGSVCAA----FDTKT-GLRVAVKKLSRPFQSIIHAKRTYRELR 80
Query: 127 FLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLED--------RLFSRAQPTLP 178
L + H N++ LL + P RSLE+ L +
Sbjct: 81 LLKHMKHENVIGLLDV----------------FTPARSLEEFNDVYLVTHLMGADLNNIV 124
Query: 179 WKTRLE------IILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLARE 232
+L +I GL Y+H +I+RD K SN+ ++ + + K+ DFGLAR
Sbjct: 125 KCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 181
Query: 233 GPTGDHTHVSTAVVGTYGYAAPE-YIETGHLKSQSDIWSFGVVLYEILTGRRVL 285
T D T V T Y APE + H DIWS G ++ E+LTGR +
Sbjct: 182 --TADEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 230
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 98/234 (41%), Gaps = 46/234 (19%)
Query: 69 EATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNN--HGLQGHKQWLAEVQ 126
E + + +G G +GSV D + L VAVKKL+ + K+ E++
Sbjct: 26 EVPERYQNLSPVGSGAYGSVCAA----FDTKT-GLRVAVKKLSRPFQSIIHAKRTYRELR 80
Query: 127 FLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLED--------RLFSRAQPTLP 178
L + H N++ LL + P RSLE+ L +
Sbjct: 81 LLKHMKHENVIGLLDV----------------FTPARSLEEFNDVYLVTHLMGADLNNIV 124
Query: 179 WKTRLE------IILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLARE 232
+L +I GL Y+H +I+RD K SN+ ++ + + K+ DFGLAR
Sbjct: 125 KCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 181
Query: 233 GPTGDHTHVSTAVVGTYGYAAPE-YIETGHLKSQSDIWSFGVVLYEILTGRRVL 285
T D T V T Y APE + H DIWS G ++ E+LTGR +
Sbjct: 182 --TADEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 230
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 116/285 (40%), Gaps = 52/285 (18%)
Query: 73 GFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVS 132
GF + +I + V+ G I P +P ++ E+ ++
Sbjct: 29 GFAKCFEISDADTKEVFAGKIVPKSLLLKP-------------HQREKMSMEISIHRSLA 75
Query: 133 HPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSL---EDRLFSRAQPTLPWKTRLEIILGA 189
H ++V G+ D +V E RSL R + +P + R +I+LG
Sbjct: 76 HQHVVGFHGFFEDND----FVFVVLELCRRRSLLELHKRRKALTEPEARYYLR-QIVLGC 130
Query: 190 AEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTY 249
YLH +VI+RD K N+ L+ + + K+ DFGLA + + GT
Sbjct: 131 Q----YLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER--KKTLCGTP 181
Query: 250 GYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKK 309
Y APE + + D+WS G ++Y +L G +P E L K+
Sbjct: 182 NYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVG-------KPPFETSCL----------KE 224
Query: 310 FSMMIDPRLRNQYSI--NAARRVAKLADNCLKKNPEERPTMNQVV 352
+ I +N+YSI + A L L+ +P RPT+N+++
Sbjct: 225 TYLRIK---KNEYSIPKHINPVAASLIQKMLQTDPTARPTINELL 266
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 83/207 (40%), Gaps = 29/207 (14%)
Query: 154 LLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSN 213
L+V E + L R+ R + EI+ E + YLH I + +RD K N
Sbjct: 105 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPEN 161
Query: 214 VLLDG---NFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWS 270
+L N KL+DFG A+E T H ++T Y Y APE + D+WS
Sbjct: 162 LLYTSKRPNAILKLTDFGFAKE--TTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWS 218
Query: 271 FGVVLYEILTGRRVLERNR-----PTMEQKLLEWVKQFPADGKKFSMMIDPRLRNQYSIN 325
GV++Y +L G N P M+ ++ +FP N
Sbjct: 219 LGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFP---------------NPEWSE 263
Query: 326 AARRVAKLADNCLKKNPEERPTMNQVV 352
+ V L N LK P +R T+ + +
Sbjct: 264 VSEEVKMLIRNLLKTEPTQRMTITEFM 290
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 98/234 (41%), Gaps = 46/234 (19%)
Query: 69 EATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNN--HGLQGHKQWLAEVQ 126
E + + IG G +GSV D + L VAVKKL+ + K+ E++
Sbjct: 24 EVPERYQNLSPIGSGAYGSVCAA----FDTKT-GLRVAVKKLSRPFQSIIHAKRTYRELR 78
Query: 127 FLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLED--------RLFSRAQPTLP 178
L + H N++ LL + P RSLE+ L +
Sbjct: 79 LLKHMKHENVIGLLDV----------------FTPARSLEEFNDVYLVTHLMGADLNNIV 122
Query: 179 WKTRLE------IILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLARE 232
+L +I GL Y+H +I+RD K SN+ ++ + + K+ DFGLAR
Sbjct: 123 KCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLARH 179
Query: 233 GPTGDHTHVSTAVVGTYGYAAPE-YIETGHLKSQSDIWSFGVVLYEILTGRRVL 285
T D T V T Y APE + H DIWS G ++ E+LTGR +
Sbjct: 180 --TDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 228
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 98/234 (41%), Gaps = 46/234 (19%)
Query: 69 EATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNN--HGLQGHKQWLAEVQ 126
E + + +G G +GSV D + L VAVKKL+ + K+ E++
Sbjct: 26 EVPERYQNLSPVGSGAYGSVCAA----FDTKT-GLRVAVKKLSRPFQSIIHAKRTYRELR 80
Query: 127 FLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLED--------RLFSRAQPTLP 178
L + H N++ LL + P RSLE+ L +
Sbjct: 81 LLKHMKHENVIGLLDV----------------FTPARSLEEFNDVYLVTHLMGADLNNIV 124
Query: 179 WKTRLE------IILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLARE 232
+L +I GL Y+H +I+RD K SN+ ++ + + K+ DFGLAR
Sbjct: 125 KCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 181
Query: 233 GPTGDHTHVSTAVVGTYGYAAPE-YIETGHLKSQSDIWSFGVVLYEILTGRRVL 285
T D T V T Y APE + H DIWS G ++ E+LTGR +
Sbjct: 182 --TADEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 230
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 103/222 (46%), Gaps = 35/222 (15%)
Query: 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL---QGHKQWLAEVQFL 128
N F+ IG GGFG VY G + G+ + A+K L+ + QG L E L
Sbjct: 189 NDFSVHRIIGRGGFGEVY-GCRKADTGK----MYAMKCLDKKRIKMKQGETLALNERIML 243
Query: 129 GVVSH---PNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRL-----FSRAQPTLPWK 180
+VS P +V + T D+ + + M L L FS A
Sbjct: 244 SLVSTGDCPFIVCMSYAFHTPDKLS----FILDLMNGGDLHYHLSQHGVFSEADMRF--- 296
Query: 181 TRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTH 240
EIILG L ++H V+YRD K +N+LLD + ++SD GLA + + H
Sbjct: 297 YAAEIILG----LEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDF-SKKKPH 348
Query: 241 VSTAVVGTYGYAAPEYIETG-HLKSQSDIWSFGVVLYEILTG 281
S VGT+GY APE ++ G S +D +S G +L+++L G
Sbjct: 349 AS---VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 120/282 (42%), Gaps = 54/282 (19%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNH------------GLQGHKQW 121
F R+ +G G FG V ++V K+ NH L+ +
Sbjct: 43 FERIKTLGTGSFGRV--------------MLVKHKETGNHFAMKILDKQKVVKLKQIEHT 88
Query: 122 LAEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKT 181
L E + L V+ P LVKL S +D + +V EY+P + L + + P
Sbjct: 89 LNEKRILQAVNFPFLVKL--EYSFKDNSNL--YMVMEYVPGGEMFSHLRRIGRFSEP-HA 143
Query: 182 RL---EIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAR--EGPTG 236
R +I+L YLH + +IYRD K N+L+D +++DFG A+ +G T
Sbjct: 144 RFYAAQIVLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 196
Query: 237 DHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPT-MEQK 295
+ GT Y APE I + D W+ GV++YE+ G ++P + +K
Sbjct: 197 -------XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEK 249
Query: 296 LLEWVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNC 337
++ +FP+ FS + LRN ++ +R L D
Sbjct: 250 IVSGKVRFPS---HFSSDLKDLLRNLLQVDLTKRFGNLKDGV 288
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 103/222 (46%), Gaps = 35/222 (15%)
Query: 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL---QGHKQWLAEVQFL 128
N F+ IG GGFG VY G + G+ + A+K L+ + QG L E L
Sbjct: 188 NDFSVHRIIGRGGFGEVY-GCRKADTGK----MYAMKCLDKKRIKMKQGETLALNERIML 242
Query: 129 GVVSH---PNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRL-----FSRAQPTLPWK 180
+VS P +V + T D+ + + M L L FS A
Sbjct: 243 SLVSTGDCPFIVCMSYAFHTPDKLS----FILDLMNGGDLHYHLSQHGVFSEADMRF--- 295
Query: 181 TRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTH 240
EIILG L ++H V+YRD K +N+LLD + ++SD GLA + + H
Sbjct: 296 YAAEIILG----LEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDF-SKKKPH 347
Query: 241 VSTAVVGTYGYAAPEYIETG-HLKSQSDIWSFGVVLYEILTG 281
S VGT+GY APE ++ G S +D +S G +L+++L G
Sbjct: 348 AS---VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 386
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 120/282 (42%), Gaps = 54/282 (19%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNH------------GLQGHKQW 121
F R+ +G G FG V ++V K+ NH L+ +
Sbjct: 43 FERIKTLGTGSFGRV--------------MLVKHKETGNHFAMKILDKQKVVKLKQIEHT 88
Query: 122 LAEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKT 181
L E + L V+ P LVKL S +D + +V EY+P + L + + P
Sbjct: 89 LNEKRILQAVNFPFLVKL--EYSFKDNSNL--YMVMEYVPGGEMFSHLRRIGRFSEP-HA 143
Query: 182 RL---EIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAR--EGPTG 236
R +I+L YLH + +IYRD K N+L+D +++DFG A+ +G T
Sbjct: 144 RFYAAQIVLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 196
Query: 237 DHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPT-MEQK 295
+ GT Y APE I + D W+ GV++YE+ G ++P + +K
Sbjct: 197 -------XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEK 249
Query: 296 LLEWVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNC 337
++ +FP+ FS + LRN ++ +R L D
Sbjct: 250 IVSGKVRFPS---HFSSDLKDLLRNLLQVDLTKRFGNLKDGV 288
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 98/234 (41%), Gaps = 46/234 (19%)
Query: 69 EATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNN--HGLQGHKQWLAEVQ 126
E + + +G G +GSV D + L VAVKKL+ + K+ E++
Sbjct: 19 EVPERYQNLSPVGSGAYGSVCAA----FDTKT-GLRVAVKKLSRPFQSIIHAKRTYRELR 73
Query: 127 FLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLED--------RLFSRAQPTLP 178
L + H N++ LL + P RSLE+ L +
Sbjct: 74 LLKHMKHENVIGLLDV----------------FTPARSLEEFNDVYLVTHLMGADLNNIV 117
Query: 179 WKTRLE------IILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLARE 232
+L +I GL Y+H +I+RD K SN+ ++ + + K+ DFGLAR
Sbjct: 118 KXQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 174
Query: 233 GPTGDHTHVSTAVVGTYGYAAPE-YIETGHLKSQSDIWSFGVVLYEILTGRRVL 285
T D T V T Y APE + H DIWS G ++ E+LTGR +
Sbjct: 175 --TDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 98/234 (41%), Gaps = 46/234 (19%)
Query: 69 EATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNN--HGLQGHKQWLAEVQ 126
E + + +G G +GSV D + L VAVKKL+ + K+ E++
Sbjct: 19 EVPERYQNLSPVGSGAYGSVCAA----FDTKT-GLRVAVKKLSRPFQSIIHAKRTYRELR 73
Query: 127 FLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLED--------RLFSRAQPTLP 178
L + H N++ LL + P RSLE+ L +
Sbjct: 74 LLKHMKHENVIGLLDV----------------FTPARSLEEFNDVYLVTHLMGADLNNIV 117
Query: 179 WKTRLE------IILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLARE 232
+L +I GL Y+H +I+RD K SN+ ++ + + K+ DFGLAR
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 174
Query: 233 GPTGDHTHVSTAVVGTYGYAAPE-YIETGHLKSQSDIWSFGVVLYEILTGRRVL 285
T D T V T Y APE + H DIWS G ++ E+LTGR +
Sbjct: 175 --TDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 98/234 (41%), Gaps = 46/234 (19%)
Query: 69 EATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNN--HGLQGHKQWLAEVQ 126
E + + +G G +GSV D + L VAVKKL+ + K+ E++
Sbjct: 19 EVPERYQNLSPVGSGAYGSVCAA----FDTKT-GLRVAVKKLSRPFQSIIHAKRTYRELR 73
Query: 127 FLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLED--------RLFSRAQPTLP 178
L + H N++ LL + P RSLE+ L +
Sbjct: 74 LLKHMKHENVIGLLDV----------------FTPARSLEEFNDVYLVTHLMGADLNNIV 117
Query: 179 WKTRLE------IILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLARE 232
+L +I GL Y+H +I+RD K SN+ ++ + + K+ DFGLAR
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 174
Query: 233 GPTGDHTHVSTAVVGTYGYAAPE-YIETGHLKSQSDIWSFGVVLYEILTGRRVL 285
T D T V T Y APE + H DIWS G ++ E+LTGR +
Sbjct: 175 --TDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 118/268 (44%), Gaps = 26/268 (9%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSH 133
F R+ +G G FG V ++ ++ + + K L+ + L E + L V+
Sbjct: 44 FERIKTLGTGSFGRVM--LVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 134 PNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRL---EIILGAA 190
P LVKL S +D + +V EY+P + L + + P R +I+L
Sbjct: 102 PFLVKL--EFSFKDNSNL--YMVMEYVPGGEMFSHLRRIGRFSEP-HARFYAAQIVLT-- 154
Query: 191 EGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYG 250
YLH + +IYRD K N+L+D +++DFG A+ T + GT
Sbjct: 155 --FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWT-----LCGTPE 204
Query: 251 YAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPT-MEQKLLEWVKQFPADGKK 309
Y APE I + D W+ GV++YE+ G ++P + +K++ +FP+
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS---H 261
Query: 310 FSMMIDPRLRNQYSINAARRVAKLADNC 337
FS + LRN ++ +R L +
Sbjct: 262 FSSDLKDLLRNLLQVDLTKRFGNLKNGV 289
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 83/207 (40%), Gaps = 29/207 (14%)
Query: 154 LLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSN 213
L+V E + L R+ R + EI+ E + YLH I + +RD K N
Sbjct: 141 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPEN 197
Query: 214 VLLDG---NFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWS 270
+L N KL+DFG A+E T H ++T Y Y APE + D+WS
Sbjct: 198 LLYTSKRPNAILKLTDFGFAKE--TTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWS 254
Query: 271 FGVVLYEILTGRRVLERNR-----PTMEQKLLEWVKQFPADGKKFSMMIDPRLRNQYSIN 325
GV++Y +L G N P M+ ++ +FP N
Sbjct: 255 LGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFP---------------NPEWSE 299
Query: 326 AARRVAKLADNCLKKNPEERPTMNQVV 352
+ V L N LK P +R T+ + +
Sbjct: 300 VSEEVKMLIRNLLKTEPTQRMTITEFM 326
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 118/288 (40%), Gaps = 37/288 (12%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSH 133
F + IG GGFG V+K R +DG+ V+ K NN + + LA++ + +V +
Sbjct: 13 FKEIELIGSGGFGQVFKAKHR-IDGK--TYVIKRVKYNNEKAEREVKALAKLDHVNIVHY 69
Query: 134 PNLVKLLGY----CSTEDERGIQRLLV--YEYMPNRSLEDRLFSRAQPTLPWKTRLEIIL 187
Y S R + L E+ +LE + R L LE+
Sbjct: 70 NGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFE 129
Query: 188 GAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVG 247
+G+ Y+H ++I RD K SN+ L + K+ DFGL S G
Sbjct: 130 QITKGVDYIHSK---KLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRXRSK---G 183
Query: 248 TYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADG 307
T Y +PE I + + D+++ G++L E+L V + T
Sbjct: 184 TLRYMSPEQISSQDYGKEVDLYALGLILAELL---HVCDTAFET---------------S 225
Query: 308 KKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESL 355
K F+ + D + + + + KL L K PE+RP ++++ +L
Sbjct: 226 KFFTDLRDGIISDIFDKKEKTLLQKL----LSKKPEDRPNTSEILRTL 269
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 92/207 (44%), Gaps = 14/207 (6%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKL 139
IG+G F V + R + +V V K + + E ++ HP++V+L
Sbjct: 32 IGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVEL 91
Query: 140 LGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRL--EIILGAAEGLAYLH 197
L S++ +V+E+M L + RA + + + E L Y H
Sbjct: 92 LETYSSDG----MLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCH 147
Query: 198 EGLEIQVIYRDFKTSNVLLDG--NFKP-KLSDFGLAREGPTGDHTHVSTAVVGTYGYAAP 254
+ +I+RD K NVLL N P KL DFG+A + G+ V+ VGT + AP
Sbjct: 148 DN---NIIHRDVKPENVLLASKENSAPVKLGDFGVAIQ--LGESGLVAGGRVGTPHFMAP 202
Query: 255 EYIETGHLKSQSDIWSFGVVLYEILTG 281
E ++ D+W GV+L+ +L+G
Sbjct: 203 EVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 98/234 (41%), Gaps = 46/234 (19%)
Query: 69 EATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNN--HGLQGHKQWLAEVQ 126
E + + +G G +GSV D + L VAVKKL+ + K+ E++
Sbjct: 19 EVPERYQNLSPVGSGAYGSVCAA----FDTKT-GLRVAVKKLSRPFQSIIHAKRTYRELR 73
Query: 127 FLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLED--------RLFSRAQPTLP 178
L + H N++ LL + P RSLE+ L +
Sbjct: 74 LLKHMKHENVIGLLDV----------------FTPARSLEEFNDVYLVTHLMGADLNNIV 117
Query: 179 WKTRLE------IILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLARE 232
+L +I GL Y+H +I+RD K SN+ ++ + + K+ DFGLAR
Sbjct: 118 KXQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLARH 174
Query: 233 GPTGDHTHVSTAVVGTYGYAAPE-YIETGHLKSQSDIWSFGVVLYEILTGRRVL 285
T D T V T Y APE + H DIWS G ++ E+LTGR +
Sbjct: 175 --TDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 83/207 (40%), Gaps = 29/207 (14%)
Query: 154 LLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSN 213
L+V E + L R+ R + EI+ E + YLH I + +RD K N
Sbjct: 135 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPEN 191
Query: 214 VLLDG---NFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWS 270
+L N KL+DFG A+E T H ++T Y Y APE + D+WS
Sbjct: 192 LLYTSKRPNAILKLTDFGFAKE--TTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWS 248
Query: 271 FGVVLYEILTGRRVLERNR-----PTMEQKLLEWVKQFPADGKKFSMMIDPRLRNQYSIN 325
GV++Y +L G N P M+ ++ +FP N
Sbjct: 249 LGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFP---------------NPEWSE 293
Query: 326 AARRVAKLADNCLKKNPEERPTMNQVV 352
+ V L N LK P +R T+ + +
Sbjct: 294 VSEEVKMLIRNLLKTEPTQRMTITEFM 320
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 98/234 (41%), Gaps = 46/234 (19%)
Query: 69 EATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNN--HGLQGHKQWLAEVQ 126
E + + +G G +GSV D + L VAVKKL+ + K+ E++
Sbjct: 19 EVPERYQNLSPVGSGAYGSVCAA----FDTKT-GLRVAVKKLSRPFQSIIHAKRTYRELR 73
Query: 127 FLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLED--------RLFSRAQPTLP 178
L + H N++ LL + P RSLE+ L +
Sbjct: 74 LLKHMKHENVIGLLDV----------------FTPARSLEEFNDVYLVTHLMGADLNNIV 117
Query: 179 WKTRLE------IILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLARE 232
+L +I GL Y+H +I+RD K SN+ ++ + + K+ DFGLAR
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 174
Query: 233 GPTGDHTHVSTAVVGTYGYAAPE-YIETGHLKSQSDIWSFGVVLYEILTGRRVL 285
T D T V T Y APE + H DIWS G ++ E+LTGR +
Sbjct: 175 --TDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 83/207 (40%), Gaps = 29/207 (14%)
Query: 154 LLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSN 213
L+V E + L R+ R + EI+ E + YLH I + +RD K N
Sbjct: 97 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPEN 153
Query: 214 VLLDG---NFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWS 270
+L N KL+DFG A+E T H ++T Y Y APE + D+WS
Sbjct: 154 LLYTSKRPNAILKLTDFGFAKE--TTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWS 210
Query: 271 FGVVLYEILTGRRVLERNR-----PTMEQKLLEWVKQFPADGKKFSMMIDPRLRNQYSIN 325
GV++Y +L G N P M+ ++ +FP N
Sbjct: 211 LGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFP---------------NPEWSE 255
Query: 326 AARRVAKLADNCLKKNPEERPTMNQVV 352
+ V L N LK P +R T+ + +
Sbjct: 256 VSEEVKMLIRNLLKTEPTQRMTITEFM 282
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 96/234 (41%), Gaps = 46/234 (19%)
Query: 69 EATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNN--HGLQGHKQWLAEVQ 126
E + + +G G +GSV R VAVKKL+ + K+ E++
Sbjct: 29 EVPERYQNLAPVGSGAYGSVCAAFDTKTGHR-----VAVKKLSRPFQSIIHAKRTYRELR 83
Query: 127 FLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLED--------RLFSRAQPTLP 178
L + H N++ LL + P RSLE+ L +
Sbjct: 84 LLKHMKHENVIGLLDV----------------FTPARSLEEFNDVYLVTHLMGADLNNIV 127
Query: 179 WKTRLE------IILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLARE 232
+L +I GL Y+H +I+RD K SN+ ++ + + K+ DFGLAR
Sbjct: 128 KCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 184
Query: 233 GPTGDHTHVSTAVVGTYGYAAPE-YIETGHLKSQSDIWSFGVVLYEILTGRRVL 285
T D T V T Y APE + H DIWS G ++ E+LTGR +
Sbjct: 185 --TDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 233
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 98/234 (41%), Gaps = 46/234 (19%)
Query: 69 EATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNN--HGLQGHKQWLAEVQ 126
E + + +G G +GSV D + L VAVKKL+ + K+ E++
Sbjct: 24 EVPERYQNLSPVGSGAYGSVCAA----FDTKT-GLRVAVKKLSRPFQSIIHAKRTYRELR 78
Query: 127 FLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLED--------RLFSRAQPTLP 178
L + H N++ LL + P RSLE+ L +
Sbjct: 79 LLKHMKHENVIGLLDV----------------FTPARSLEEFNDVYLVTHLMGADLNNIV 122
Query: 179 WKTRLE------IILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLARE 232
+L +I GL Y+H +I+RD K SN+ ++ + + K+ DFGLAR
Sbjct: 123 KCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 179
Query: 233 GPTGDHTHVSTAVVGTYGYAAPE-YIETGHLKSQSDIWSFGVVLYEILTGRRVL 285
T D T V T Y APE + H DIWS G ++ E+LTGR +
Sbjct: 180 --TDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 228
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 98/234 (41%), Gaps = 46/234 (19%)
Query: 69 EATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNN--HGLQGHKQWLAEVQ 126
E + + +G G +GSV D + L VAVKKL+ + K+ E++
Sbjct: 18 EVPERYQNLSPVGSGAYGSVCAA----FDTKT-GLRVAVKKLSRPFQSIIHAKRTYRELR 72
Query: 127 FLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLED--------RLFSRAQPTLP 178
L + H N++ LL + P RSLE+ L +
Sbjct: 73 LLKHMKHENVIGLLDV----------------FTPARSLEEFNDVYLVTHLMGADLNNIV 116
Query: 179 WKTRLE------IILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLARE 232
+L +I GL Y+H +I+RD K SN+ ++ + + K+ DFGLAR
Sbjct: 117 KCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 173
Query: 233 GPTGDHTHVSTAVVGTYGYAAPE-YIETGHLKSQSDIWSFGVVLYEILTGRRVL 285
T D T V T Y APE + H DIWS G ++ E+LTGR +
Sbjct: 174 --TDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 222
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 98/234 (41%), Gaps = 46/234 (19%)
Query: 69 EATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNN--HGLQGHKQWLAEVQ 126
E + + +G G +GSV D + L VAVKKL+ + K+ E++
Sbjct: 26 EVPERYQNLSPVGSGAYGSVCAA----FDTKT-GLRVAVKKLSRPFQSIIHAKRTYRELR 80
Query: 127 FLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLED--------RLFSRAQPTLP 178
L + H N++ LL + P RSLE+ L +
Sbjct: 81 LLKHMKHENVIGLLDV----------------FTPARSLEEFNDVYLVTHLMGADLNNIV 124
Query: 179 WKTRLE------IILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLARE 232
+L +I GL Y+H +I+RD K SN+ ++ + + K+ DFGLAR
Sbjct: 125 KCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 181
Query: 233 GPTGDHTHVSTAVVGTYGYAAPE-YIETGHLKSQSDIWSFGVVLYEILTGRRVL 285
T D T V T Y APE + H DIWS G ++ E+LTGR +
Sbjct: 182 --TDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 230
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 98/234 (41%), Gaps = 46/234 (19%)
Query: 69 EATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNN--HGLQGHKQWLAEVQ 126
E + + +G G +GSV D + L VAVKKL+ + K+ E++
Sbjct: 19 EVPERYQNLSPVGSGAYGSVCAA----FDTKT-GLRVAVKKLSRPFQSIIHAKRTYRELR 73
Query: 127 FLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLED--------RLFSRAQPTLP 178
L + H N++ LL + P RSLE+ L +
Sbjct: 74 LLKHMKHENVIGLLDV----------------FTPARSLEEFNDVYLVTHLMGADLNNIV 117
Query: 179 WKTRLE------IILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLARE 232
+L +I GL Y+H +I+RD K SN+ ++ + + K+ DFGLAR
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 174
Query: 233 GPTGDHTHVSTAVVGTYGYAAPE-YIETGHLKSQSDIWSFGVVLYEILTGRRVL 285
T D T V T Y APE + H DIWS G ++ E+LTGR +
Sbjct: 175 --TDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 96/211 (45%), Gaps = 19/211 (9%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSH 133
+ R+ K+G G +G V R E + ++K + + + L EV L ++ H
Sbjct: 39 YQRVKKLGSGAYGEVL--LCRDKVTHVERAIKIIRK-TSVSTSSNSKLLEEVAVLKLLDH 95
Query: 134 PNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGL 193
PN++KL Y ED+R LV E L D + R + II G+
Sbjct: 96 PNIMKL--YDFFEDKRNY--YLVMECYKGGELFDEIIHRMK--FNEVDAAVIIKQVLSGV 149
Query: 194 AYLHEGLEIQVIYRDFKTSNVLLDGNFKP---KLSDFGLAREGPTGDHTHVSTAVVGTYG 250
YLH+ +++RD K N+LL+ K K+ DFGL+ ++ +GT
Sbjct: 150 TYLHKH---NIVHRDLKPENLLLESKEKDALIKIVDFGLS---AVFENQKKMKERLGTAY 203
Query: 251 YAAPEYIETGHLKSQSDIWSFGVVLYEILTG 281
Y APE + + + D+WS GV+L+ +L G
Sbjct: 204 YIAPEVLRKKY-DEKCDVWSIGVILFILLAG 233
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 83/207 (40%), Gaps = 29/207 (14%)
Query: 154 LLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSN 213
L+V E + L R+ R + EI+ E + YLH I + +RD K N
Sbjct: 95 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPEN 151
Query: 214 VLLDG---NFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWS 270
+L N KL+DFG A+E T H ++T Y Y APE + D+WS
Sbjct: 152 LLYTSKRPNAILKLTDFGFAKE--TTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWS 208
Query: 271 FGVVLYEILTGRRVLERNR-----PTMEQKLLEWVKQFPADGKKFSMMIDPRLRNQYSIN 325
GV++Y +L G N P M+ ++ +FP N
Sbjct: 209 LGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFP---------------NPEWSE 253
Query: 326 AARRVAKLADNCLKKNPEERPTMNQVV 352
+ V L N LK P +R T+ + +
Sbjct: 254 VSEEVKMLIRNLLKTEPTQRMTITEFM 280
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 98/234 (41%), Gaps = 46/234 (19%)
Query: 69 EATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNN--HGLQGHKQWLAEVQ 126
E + + +G G +GSV D + L VAVKKL+ + K+ E++
Sbjct: 19 EVPERYQNLSPVGSGAYGSVCAA----FDTKT-GLRVAVKKLSRPFQSIIHAKRTYRELR 73
Query: 127 FLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLED--------RLFSRAQPTLP 178
L + H N++ LL + P RSLE+ L +
Sbjct: 74 LLKHMKHENVIGLLDV----------------FTPARSLEEFNDVYLVTHLMGADLNNIV 117
Query: 179 WKTRLE------IILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLARE 232
+L +I GL Y+H +I+RD K SN+ ++ + + K+ DFGLAR
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 174
Query: 233 GPTGDHTHVSTAVVGTYGYAAPE-YIETGHLKSQSDIWSFGVVLYEILTGRRVL 285
T D T V T Y APE + H DIWS G ++ E+LTGR +
Sbjct: 175 --TDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 83/207 (40%), Gaps = 29/207 (14%)
Query: 154 LLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSN 213
L+V E + L R+ R + EI+ E + YLH I + +RD K N
Sbjct: 91 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPEN 147
Query: 214 VLLDG---NFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWS 270
+L N KL+DFG A+E T H ++T Y Y APE + D+WS
Sbjct: 148 LLYTSKRPNAILKLTDFGFAKE--TTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWS 204
Query: 271 FGVVLYEILTGRRVLERNR-----PTMEQKLLEWVKQFPADGKKFSMMIDPRLRNQYSIN 325
GV++Y +L G N P M+ ++ +FP N
Sbjct: 205 LGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFP---------------NPEWSE 249
Query: 326 AARRVAKLADNCLKKNPEERPTMNQVV 352
+ V L N LK P +R T+ + +
Sbjct: 250 VSEEVKMLIRNLLKTEPTQRMTITEFM 276
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 120/270 (44%), Gaps = 30/270 (11%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSH 133
F R+ +G G FG V ++ ++ + + K L+ + L E + L V+
Sbjct: 43 FERIKTLGTGSFGRVM--LVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 134 PNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRL---EIILGAA 190
P LVKL S +D + +V EY+P + L + + P R +I+L
Sbjct: 101 PFLVKL--EFSFKDNSNL--YMVMEYVPGGEMFSHLRRIGRFSEP-HARFYAAQIVLT-- 153
Query: 191 EGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAR--EGPTGDHTHVSTAVVGT 248
YLH + +IYRD K N+L+D +++DFG A+ +G T + GT
Sbjct: 154 --FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW-------XLCGT 201
Query: 249 YGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPT-MEQKLLEWVKQFPADG 307
Y APE I + D W+ GV++YE+ G ++P + +K++ +FP+
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS-- 259
Query: 308 KKFSMMIDPRLRNQYSINAARRVAKLADNC 337
FS + LRN ++ +R L +
Sbjct: 260 -HFSSDLKDLLRNLLQVDLTKRFGNLKNGV 288
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 120/270 (44%), Gaps = 30/270 (11%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSH 133
F R+ +G G FG V ++ ++ + + K L+ + L E + L V+
Sbjct: 43 FERIKTLGTGSFGRVM--LVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 134 PNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRL---EIILGAA 190
P LVKL S +D + +V EY+P + L + + P R +I+L
Sbjct: 101 PFLVKL--EFSFKDNSNL--YMVMEYVPGGEMFSHLRRIGRFSEP-HARFYAAQIVLT-- 153
Query: 191 EGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAR--EGPTGDHTHVSTAVVGT 248
YLH + +IYRD K N+L+D +++DFG A+ +G T + GT
Sbjct: 154 --FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW-------XLCGT 201
Query: 249 YGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPT-MEQKLLEWVKQFPADG 307
Y APE I + D W+ GV++YE+ G ++P + +K++ +FP+
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS-- 259
Query: 308 KKFSMMIDPRLRNQYSINAARRVAKLADNC 337
FS + LRN ++ +R L +
Sbjct: 260 -HFSSDLKDLLRNLLQVDLTKRFGNLKNGV 288
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 98/234 (41%), Gaps = 46/234 (19%)
Query: 69 EATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNN--HGLQGHKQWLAEVQ 126
E + + +G G +GSV D + L VAVKKL+ + K+ E++
Sbjct: 21 EVPERYQNLSPVGSGAYGSVCAA----FDTKTG-LRVAVKKLSRPFQSIIHAKRTYRELR 75
Query: 127 FLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLED--------RLFSRAQPTLP 178
L + H N++ LL + P RSLE+ L +
Sbjct: 76 LLKHMKHENVIGLLDV----------------FTPARSLEEFNDVYLVTHLMGADLNNIV 119
Query: 179 WKTRLE------IILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLARE 232
+L +I GL Y+H +I+RD K SN+ ++ + + K+ DFGLAR
Sbjct: 120 KCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 176
Query: 233 GPTGDHTHVSTAVVGTYGYAAPE-YIETGHLKSQSDIWSFGVVLYEILTGRRVL 285
T D T V T Y APE + H DIWS G ++ E+LTGR +
Sbjct: 177 --TDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 225
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 83/207 (40%), Gaps = 29/207 (14%)
Query: 154 LLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSN 213
L+V E + L R+ R + EI+ E + YLH I + +RD K N
Sbjct: 96 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPEN 152
Query: 214 VLLDG---NFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWS 270
+L N KL+DFG A+E T H ++T Y Y APE + D+WS
Sbjct: 153 LLYTSKRPNAILKLTDFGFAKE--TTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWS 209
Query: 271 FGVVLYEILTGRRVLERNR-----PTMEQKLLEWVKQFPADGKKFSMMIDPRLRNQYSIN 325
GV++Y +L G N P M+ ++ +FP N
Sbjct: 210 LGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFP---------------NPEWSE 254
Query: 326 AARRVAKLADNCLKKNPEERPTMNQVV 352
+ V L N LK P +R T+ + +
Sbjct: 255 VSEEVKMLIRNLLKTEPTQRMTITEFM 281
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 91/204 (44%), Gaps = 16/204 (7%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLN-NHGLQGHKQWLAEVQFLGVVSHPNLVK 138
+GEG G V R + VAVK ++ + + E+ +++H N+VK
Sbjct: 14 LGEGAAGEVQLAVNRVTEE-----AVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHE 198
G+ E IQ L + EY L DR+ P R L A G+ YLH
Sbjct: 69 FYGH---RREGNIQYLFL-EYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 122
Query: 199 GLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIE 258
I + +RD K N+LLD K+SDFGLA + + + GT Y APE ++
Sbjct: 123 ---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 259 TGHLKSQS-DIWSFGVVLYEILTG 281
++ D+WS G+VL +L G
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 83/207 (40%), Gaps = 29/207 (14%)
Query: 154 LLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSN 213
L+V E + L R+ R + EI+ E + YLH I + +RD K N
Sbjct: 90 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPEN 146
Query: 214 VLLDG---NFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWS 270
+L N KL+DFG A+E T H ++T Y Y APE + D+WS
Sbjct: 147 LLYTSKRPNAILKLTDFGFAKE--TTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWS 203
Query: 271 FGVVLYEILTGRRVLERNR-----PTMEQKLLEWVKQFPADGKKFSMMIDPRLRNQYSIN 325
GV++Y +L G N P M+ ++ +FP N
Sbjct: 204 LGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFP---------------NPEWSE 248
Query: 326 AARRVAKLADNCLKKNPEERPTMNQVV 352
+ V L N LK P +R T+ + +
Sbjct: 249 VSEEVKMLIRNLLKTEPTQRMTITEFM 275
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 98/234 (41%), Gaps = 46/234 (19%)
Query: 69 EATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNN--HGLQGHKQWLAEVQ 126
E + + +G G +GSV D + L VAVKKL+ + K+ E++
Sbjct: 19 EVPERYQNLSPVGSGAYGSVCAA----FDTKT-GLRVAVKKLSRPFQSIIHAKRTYRELR 73
Query: 127 FLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLED--------RLFSRAQPTLP 178
L + H N++ LL + P RSLE+ L +
Sbjct: 74 LLKHMKHENVIGLLDV----------------FTPARSLEEFNDVYLVTHLMGADLNNIV 117
Query: 179 WKTRLE------IILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLARE 232
+L +I GL Y+H +I+RD K SN+ ++ + + K+ DFGLAR
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 174
Query: 233 GPTGDHTHVSTAVVGTYGYAAPE-YIETGHLKSQSDIWSFGVVLYEILTGRRVL 285
T D T V T Y APE + H DIWS G ++ E+LTGR +
Sbjct: 175 --TDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 119/270 (44%), Gaps = 30/270 (11%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSH 133
F R+ +G G FG V ++ ++ + + K L+ + L E + L V+
Sbjct: 43 FERIKTLGTGSFGRVM--LVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 134 PNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRL---EIILGAA 190
P LVKL S +D + +V EY P + L + + P R +I+L
Sbjct: 101 PFLVKL--EFSFKDNSNL--YMVMEYAPGGEMFSHLRRIGRFSEP-HARFYAAQIVLT-- 153
Query: 191 EGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAR--EGPTGDHTHVSTAVVGT 248
YLH + +IYRD K N+++D K++DFG A+ +G T + GT
Sbjct: 154 --FEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRT-------WXLCGT 201
Query: 249 YGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPT-MEQKLLEWVKQFPADG 307
Y APE I + D W+ GV++YE+ G ++P + +K++ +FP+
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS-- 259
Query: 308 KKFSMMIDPRLRNQYSINAARRVAKLADNC 337
FS + LRN ++ +R L +
Sbjct: 260 -HFSSDLKDLLRNLLQVDLTKRFGNLKNGV 288
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 98/234 (41%), Gaps = 46/234 (19%)
Query: 69 EATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNN--HGLQGHKQWLAEVQ 126
E + + +G G +GSV D + L VAVKKL+ + K+ E++
Sbjct: 19 EVPERYQNLSPVGSGAYGSVCAA----FDTKTG-LRVAVKKLSRPFQSIIHAKRTYRELR 73
Query: 127 FLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLED--------RLFSRAQPTLP 178
L + H N++ LL + P RSLE+ L +
Sbjct: 74 LLKHMKHENVIGLLDV----------------FTPARSLEEFNDVYLVTHLMGADLNNIV 117
Query: 179 WKTRLE------IILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLARE 232
+L +I GL Y+H +I+RD K SN+ ++ + + K+ DFGLAR
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 174
Query: 233 GPTGDHTHVSTAVVGTYGYAAPE-YIETGHLKSQSDIWSFGVVLYEILTGRRVL 285
T D T V T Y APE + H DIWS G ++ E+LTGR +
Sbjct: 175 --TDDEM---TGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 120/270 (44%), Gaps = 30/270 (11%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSH 133
F R+ +G G FG V ++ ++ + + K L+ + L E + L V+
Sbjct: 44 FERIKTLGTGSFGRVM--LVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 134 PNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRL---EIILGAA 190
P LVKL S +D + +V EY+P + L + + P R +I+L
Sbjct: 102 PFLVKL--EFSFKDNSNL--YMVMEYVPGGEMFSHLRRIGRFSEP-HARFYAAQIVLT-- 154
Query: 191 EGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAR--EGPTGDHTHVSTAVVGT 248
YLH + +IYRD K N+L+D +++DFG A+ +G T + GT
Sbjct: 155 --FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW-------XLCGT 202
Query: 249 YGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPT-MEQKLLEWVKQFPADG 307
Y APE I + D W+ GV++YE+ G ++P + +K++ +FP+
Sbjct: 203 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS-- 260
Query: 308 KKFSMMIDPRLRNQYSINAARRVAKLADNC 337
FS + LRN ++ +R L +
Sbjct: 261 -HFSSDLKDLLRNLLQVDLTKRFGNLKNGV 289
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 83/207 (40%), Gaps = 29/207 (14%)
Query: 154 LLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSN 213
L+V E + L R+ R + EI+ E + YLH I + +RD K N
Sbjct: 89 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPEN 145
Query: 214 VLLDG---NFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWS 270
+L N KL+DFG A+E T H ++T Y Y APE + D+WS
Sbjct: 146 LLYTSKRPNAILKLTDFGFAKE--TTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWS 202
Query: 271 FGVVLYEILTGRRVLERNR-----PTMEQKLLEWVKQFPADGKKFSMMIDPRLRNQYSIN 325
GV++Y +L G N P M+ ++ +FP N
Sbjct: 203 LGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFP---------------NPEWSE 247
Query: 326 AARRVAKLADNCLKKNPEERPTMNQVV 352
+ V L N LK P +R T+ + +
Sbjct: 248 VSEEVKMLIRNLLKTEPTQRMTITEFM 274
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 98/234 (41%), Gaps = 46/234 (19%)
Query: 69 EATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNN--HGLQGHKQWLAEVQ 126
E + + +G G +GSV D + L VAVKKL+ + K+ E++
Sbjct: 31 EVPERYQNLSPVGSGAYGSVCAA----FDTKT-GLRVAVKKLSKPFQSIIHAKRTYRELR 85
Query: 127 FLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLED--------RLFSRAQPTLP 178
L + H N++ LL + P RSLE+ L +
Sbjct: 86 LLKHMKHENVIGLLDV----------------FTPARSLEEFNDVYLVTHLMGADLNNIV 129
Query: 179 WKTRLE------IILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLARE 232
+L +I GL Y+H +I+RD K SN+ ++ + + K+ DFGLAR
Sbjct: 130 KCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 186
Query: 233 GPTGDHTHVSTAVVGTYGYAAPE-YIETGHLKSQSDIWSFGVVLYEILTGRRVL 285
T D T V T Y APE + H DIWS G ++ E+LTGR +
Sbjct: 187 --TDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 235
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 98/234 (41%), Gaps = 46/234 (19%)
Query: 69 EATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNN--HGLQGHKQWLAEVQ 126
E + + +G G +GSV D + L VAVKKL+ + K+ E++
Sbjct: 30 EVPERYQNLSPVGSGAYGSVCAA----FDTKT-GLRVAVKKLSRPFQSIIHAKRTYRELR 84
Query: 127 FLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLED--------RLFSRAQPTLP 178
L + H N++ LL + P RSLE+ L +
Sbjct: 85 LLKHMKHENVIGLLDV----------------FTPARSLEEFNDVYLVTHLMGADLNNIV 128
Query: 179 WKTRLE------IILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLARE 232
+L +I GL Y+H +I+RD K SN+ ++ + + K+ DFGLAR
Sbjct: 129 KCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 185
Query: 233 GPTGDHTHVSTAVVGTYGYAAPE-YIETGHLKSQSDIWSFGVVLYEILTGRRVL 285
T D T V T Y APE + H DIWS G ++ E+LTGR +
Sbjct: 186 --TDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 234
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 98/234 (41%), Gaps = 46/234 (19%)
Query: 69 EATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNN--HGLQGHKQWLAEVQ 126
E + + +G G +GSV D + L VAVKKL+ + K+ E++
Sbjct: 25 EVPERYQNLSPVGSGAYGSVCAA----FDTKT-GLRVAVKKLSRPFQSIIHAKRTYRELR 79
Query: 127 FLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLED--------RLFSRAQPTLP 178
L + H N++ LL + P RSLE+ L +
Sbjct: 80 LLKHMKHENVIGLLDV----------------FTPARSLEEFNDVYLVTHLMGADLNNIV 123
Query: 179 WKTRLE------IILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLARE 232
+L +I GL Y+H +I+RD K SN+ ++ + + K+ DFGLAR
Sbjct: 124 KCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 180
Query: 233 GPTGDHTHVSTAVVGTYGYAAPE-YIETGHLKSQSDIWSFGVVLYEILTGRRVL 285
T D T V T Y APE + H DIWS G ++ E+LTGR +
Sbjct: 181 --TDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 229
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 98/234 (41%), Gaps = 46/234 (19%)
Query: 69 EATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNN--HGLQGHKQWLAEVQ 126
E + + +G G +GSV D + L VAVKKL+ + K+ E++
Sbjct: 24 EVPERYQNLSPVGSGAYGSVCAA----FDTKT-GLRVAVKKLSRPFQSIIHAKRTYRELR 78
Query: 127 FLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLED--------RLFSRAQPTLP 178
L + H N++ LL + P RSLE+ L +
Sbjct: 79 LLKHMKHENVIGLLDV----------------FTPARSLEEFNDVYLVTHLMGADLNNIV 122
Query: 179 WKTRLE------IILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLARE 232
+L +I GL Y+H +I+RD K SN+ ++ + + K+ DFGLAR
Sbjct: 123 KCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLARH 179
Query: 233 GPTGDHTHVSTAVVGTYGYAAPE-YIETGHLKSQSDIWSFGVVLYEILTGRRVL 285
T D T V T Y APE + H DIWS G ++ E+LTGR +
Sbjct: 180 --TDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 228
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 98/234 (41%), Gaps = 46/234 (19%)
Query: 69 EATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNN--HGLQGHKQWLAEVQ 126
E + + +G G +GSV D + L VAVKKL+ + K+ E++
Sbjct: 21 EVPERYQNLSPVGSGAYGSVCAA----FDTKT-GLRVAVKKLSRPFQSIIHAKRTYRELR 75
Query: 127 FLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLED--------RLFSRAQPTLP 178
L + H N++ LL + P RSLE+ L +
Sbjct: 76 LLKHMKHENVIGLLDV----------------FTPARSLEEFNDVYLVTHLMGADLNNIV 119
Query: 179 WKTRLE------IILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLARE 232
+L +I GL Y+H +I+RD K SN+ ++ + + K+ DFGLAR
Sbjct: 120 KCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 176
Query: 233 GPTGDHTHVSTAVVGTYGYAAPE-YIETGHLKSQSDIWSFGVVLYEILTGRRVL 285
T D T V T Y APE + H DIWS G ++ E+LTGR +
Sbjct: 177 --TDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 225
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 103/217 (47%), Gaps = 23/217 (10%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKL----NNHGLQGHKQWLAEVQFLG 129
+ ++ KIGEG +G+V+K R +VA+K++ ++ G+ L E+ L
Sbjct: 4 YEKLEKIGEGTYGTVFKAK-----NRETHEIVALKRVRLDDDDEGVPSSA--LREICLLK 56
Query: 130 VVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGA 189
+ H N+V+L ++ + LV+E+ ++ L+ + F L + +
Sbjct: 57 ELKHKNIVRLHDVLHSDK----KLTLVFEFC-DQDLK-KYFDSCNGDLDPEIVKSFLFQL 110
Query: 190 AEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTY 249
+GL + H V++RD K N+L++ N + KL++FGLAR G +A V T
Sbjct: 111 LKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLARA--FGIPVRCYSAEVVTL 165
Query: 250 GYAAPEYIETGHLKSQS-DIWSFGVVLYEILTGRRVL 285
Y P+ + L S S D+WS G + E+ R L
Sbjct: 166 WYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPL 202
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 98/234 (41%), Gaps = 46/234 (19%)
Query: 69 EATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNN--HGLQGHKQWLAEVQ 126
E + + +G G +GSV D + L VAVKKL+ + K+ E++
Sbjct: 31 EVPERYQNLSPVGSGAYGSVCAA----FDTKT-GLRVAVKKLSRPFQSIIHAKRTYRELR 85
Query: 127 FLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLED--------RLFSRAQPTLP 178
L + H N++ LL + P RSLE+ L +
Sbjct: 86 LLKHMKHENVIGLLDV----------------FTPARSLEEFNDVYLVTHLMGADLNNIV 129
Query: 179 WKTRLE------IILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLARE 232
+L +I GL Y+H +I+RD K SN+ ++ + + K+ DFGLAR
Sbjct: 130 KCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 186
Query: 233 GPTGDHTHVSTAVVGTYGYAAPE-YIETGHLKSQSDIWSFGVVLYEILTGRRVL 285
T D T V T Y APE + H DIWS G ++ E+LTGR +
Sbjct: 187 --TDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 235
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 98/234 (41%), Gaps = 46/234 (19%)
Query: 69 EATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNN--HGLQGHKQWLAEVQ 126
E + + +G G +GSV D + L VAVKKL+ + K+ E++
Sbjct: 31 EVPERYQNLSPVGSGAYGSVCAA----FDTKT-GLRVAVKKLSRPFQSIIHAKRTYRELR 85
Query: 127 FLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLED--------RLFSRAQPTLP 178
L + H N++ LL + P RSLE+ L +
Sbjct: 86 LLKHMKHENVIGLLDV----------------FTPARSLEEFNDVYLVTHLMGADLNNIV 129
Query: 179 WKTRLE------IILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLARE 232
+L +I GL Y+H +I+RD K SN+ ++ + + K+ DFGLAR
Sbjct: 130 KCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 186
Query: 233 GPTGDHTHVSTAVVGTYGYAAPE-YIETGHLKSQSDIWSFGVVLYEILTGRRVL 285
T D T V T Y APE + H DIWS G ++ E+LTGR +
Sbjct: 187 --TDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 235
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 97/210 (46%), Gaps = 28/210 (13%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKL 139
+G+G FG V + + G+ E V + K + L EVQ L + HPN+ KL
Sbjct: 34 LGKGSFGEVILCKDK-ITGQ-ECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKL 91
Query: 140 LGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEG 199
+ +++G LV E L D + SR + + R II G+ Y H+
Sbjct: 92 YEFF---EDKGY-FYLVGEVYTGGELFDEIISRKRFSEVDAAR--IIRQVLSGITYXHKN 145
Query: 200 LEIQVIYRDFKTSNVLLDGNFKP---KLSDFGLAREGPTGDHTHVSTAV-----VGTYGY 251
++++RD K N+LL+ K ++ DFGL+ TH + +GT Y
Sbjct: 146 ---KIVHRDLKPENLLLESKSKDANIRIIDFGLS--------THFEASKKXKDKIGTAYY 194
Query: 252 AAPEYIETGHLKSQSDIWSFGVVLYEILTG 281
APE + G + D+WS GV+LY +L+G
Sbjct: 195 IAPEVLH-GTYDEKCDVWSTGVILYILLSG 223
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 120/270 (44%), Gaps = 30/270 (11%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSH 133
F R+ +G G FG V ++ ++ + + K L+ + L E + L V+
Sbjct: 43 FERIKTLGTGSFGRVM--LVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNF 100
Query: 134 PNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRL---EIILGAA 190
P LVKL S +D + +V EY P + L + + P R +I+L
Sbjct: 101 PFLVKL--EFSFKDNSNL--YMVMEYAPGGEMFSHLRRIGRFSEP-HARFYAAQIVLT-- 153
Query: 191 EGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAR--EGPTGDHTHVSTAVVGT 248
YLH + +IYRD K N+++D +++DFGLA+ +G T + GT
Sbjct: 154 --FEYLHS---LDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGRT-------WXLCGT 201
Query: 249 YGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPT-MEQKLLEWVKQFPADG 307
Y APE I + D W+ GV++YE+ G ++P + +K++ +FP+
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS-- 259
Query: 308 KKFSMMIDPRLRNQYSINAARRVAKLADNC 337
FS + LRN ++ +R L +
Sbjct: 260 -HFSSDLKDLLRNLLQVDLTKRFGNLKNGV 288
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 83/207 (40%), Gaps = 29/207 (14%)
Query: 154 LLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSN 213
L+V E + L R+ R + EI+ E + YLH I + +RD K N
Sbjct: 91 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPEN 147
Query: 214 VLLDG---NFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWS 270
+L N KL+DFG A+E T H ++T Y Y APE + D+WS
Sbjct: 148 LLYTSKRPNAILKLTDFGFAKE--TTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWS 204
Query: 271 FGVVLYEILTGRRVLERNR-----PTMEQKLLEWVKQFPADGKKFSMMIDPRLRNQYSIN 325
GV++Y +L G N P M+ ++ +FP N
Sbjct: 205 LGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFP---------------NPEWSE 249
Query: 326 AARRVAKLADNCLKKNPEERPTMNQVV 352
+ V L N LK P +R T+ + +
Sbjct: 250 VSEEVKMLIRNLLKTEPTQRMTITEFM 276
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 98/234 (41%), Gaps = 46/234 (19%)
Query: 69 EATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNN--HGLQGHKQWLAEVQ 126
E + + +G G +GSV D + L VAVKKL+ + K+ E++
Sbjct: 25 EVPERYQNLSPVGSGAYGSVCAA----FDTKT-GLRVAVKKLSRPFQSIIHAKRTYRELR 79
Query: 127 FLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLED--------RLFSRAQPTLP 178
L + H N++ LL + P RSLE+ L +
Sbjct: 80 LLKHMKHENVIGLLDV----------------FTPARSLEEFNDVYLVTHLMGADLNNIV 123
Query: 179 WKTRLE------IILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLARE 232
+L +I GL Y+H +I+RD K SN+ ++ + + K+ DFGLAR
Sbjct: 124 KCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 180
Query: 233 GPTGDHTHVSTAVVGTYGYAAPE-YIETGHLKSQSDIWSFGVVLYEILTGRRVL 285
T D T V T Y APE + H DIWS G ++ E+LTGR +
Sbjct: 181 --TDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 229
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 98/234 (41%), Gaps = 46/234 (19%)
Query: 69 EATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNN--HGLQGHKQWLAEVQ 126
E + + +G G +GSV D + L VAVKKL+ + K+ E++
Sbjct: 21 EVPERYQNLSPVGSGAYGSVCAA----FDTKT-GLRVAVKKLSRPFQSIIHAKRTYRELR 75
Query: 127 FLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLED--------RLFSRAQPTLP 178
L + H N++ LL + P RSLE+ L +
Sbjct: 76 LLKHMKHENVIGLLDV----------------FTPARSLEEFNDVYLVTHLMGADLNNIV 119
Query: 179 WKTRLE------IILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLARE 232
+L +I GL Y+H +I+RD K SN+ ++ + + K+ DFGLAR
Sbjct: 120 KCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 176
Query: 233 GPTGDHTHVSTAVVGTYGYAAPE-YIETGHLKSQSDIWSFGVVLYEILTGRRVL 285
T D T V T Y APE + H DIWS G ++ E+LTGR +
Sbjct: 177 --TDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 225
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 98/234 (41%), Gaps = 46/234 (19%)
Query: 69 EATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNN--HGLQGHKQWLAEVQ 126
E + + +G G +GSV D + L VAVKKL+ + K+ E++
Sbjct: 19 EVPERYQNLSPVGSGAYGSVCAA----FDTKTG-LRVAVKKLSRPFQSIIHAKRTYRELR 73
Query: 127 FLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLED--------RLFSRAQPTLP 178
L + H N++ LL + P RSLE+ L +
Sbjct: 74 LLKHMKHENVIGLLDV----------------FTPARSLEEFNDVYLVTHLMGADLNNIV 117
Query: 179 WKTRLE------IILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLARE 232
+L +I GL Y+H +I+RD K SN+ ++ + + K+ DFGLAR
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 174
Query: 233 GPTGDHTHVSTAVVGTYGYAAPE-YIETGHLKSQSDIWSFGVVLYEILTGRRVL 285
T D T V T Y APE + H DIWS G ++ E+LTGR +
Sbjct: 175 --TDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 98/234 (41%), Gaps = 46/234 (19%)
Query: 69 EATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNN--HGLQGHKQWLAEVQ 126
E + + +G G +GSV D + L VAVKKL+ + K+ E++
Sbjct: 24 EVPERYQNLSPVGSGAYGSVCAA----FDTKTG-LRVAVKKLSRPFQSIIHAKRTYRELR 78
Query: 127 FLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLED--------RLFSRAQPTLP 178
L + H N++ LL + P RSLE+ L +
Sbjct: 79 LLKHMKHENVIGLLDV----------------FTPARSLEEFNDVYLVTHLMGADLNNIV 122
Query: 179 WKTRLE------IILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLARE 232
+L +I GL Y+H +I+RD K SN+ ++ + + K+ DFGLAR
Sbjct: 123 KCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 179
Query: 233 GPTGDHTHVSTAVVGTYGYAAPE-YIETGHLKSQSDIWSFGVVLYEILTGRRVL 285
T D T V T Y APE + H DIWS G ++ E+LTGR +
Sbjct: 180 --TDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 228
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 96/234 (41%), Gaps = 46/234 (19%)
Query: 69 EATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNN--HGLQGHKQWLAEVQ 126
E + + +G G +GSV R VAVKKL+ + K+ E++
Sbjct: 19 EVPERYQNLSPVGSGAYGSVCAAFDTKTGHR-----VAVKKLSRPFQSIIHAKRTYRELR 73
Query: 127 FLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLED--------RLFSRAQPTLP 178
L + H N++ LL + P RSLE+ L +
Sbjct: 74 LLKHMKHENVIGLLDV----------------FTPARSLEEFNDVYLVTHLMGADLNNIV 117
Query: 179 WKTRLE------IILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLARE 232
+L +I GL Y+H +I+RD K SN+ ++ + + K+ DFGLAR
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 174
Query: 233 GPTGDHTHVSTAVVGTYGYAAPE-YIETGHLKSQSDIWSFGVVLYEILTGRRVL 285
T D T V T Y APE + H DIWS G ++ E+LTGR +
Sbjct: 175 --TDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 110/254 (43%), Gaps = 28/254 (11%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNN-HGLQGH-KQWLAEVQFLGVV 131
+ + IG G G V LD VA+KKL+ Q H K+ E+ + V
Sbjct: 64 YQNLKPIGSGAQGIVCAAYDAVLDRN-----VAIKKLSRPFQNQTHAKRAYRELVLMKCV 118
Query: 132 SHPNLVKLLGYCSTED--ERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGA 189
+H N++ LL + + E LV E M + L Q L + ++
Sbjct: 119 NHKNIISLLNVFTPQKTLEEFQDVYLVMELM-----DANLCQVIQMELDHERMSYLLYQM 173
Query: 190 AEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTY 249
G+ +LH +I+RD K SN+++ + K+ DFGLAR T + + T V T
Sbjct: 174 LCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT---SFMMTPYVVTR 227
Query: 250 GYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEW---VKQFPAD 306
Y APE I K DIWS G ++ E++ ++L R ++Q W ++Q
Sbjct: 228 YYRAPEVILGMGYKENVDIWSVGCIMGEMVR-HKILFPGRDYIDQ----WNKVIEQLGTP 282
Query: 307 GKKFSMMIDPRLRN 320
+F + P +RN
Sbjct: 283 CPEFMKKLQPTVRN 296
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 98/234 (41%), Gaps = 46/234 (19%)
Query: 69 EATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNN--HGLQGHKQWLAEVQ 126
E + + +G G +GSV D + L VAVKKL+ + K+ E++
Sbjct: 16 EVPERYQNLSPVGSGAYGSVCAA----FDTKTG-LRVAVKKLSRPFQSIIHAKRTYRELR 70
Query: 127 FLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLED--------RLFSRAQPTLP 178
L + H N++ LL + P RSLE+ L +
Sbjct: 71 LLKHMKHENVIGLLDV----------------FTPARSLEEFNDVYLVTHLMGADLNNIV 114
Query: 179 WKTRLE------IILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLARE 232
+L +I GL Y+H +I+RD K SN+ ++ + + K+ DFGLAR
Sbjct: 115 KCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 171
Query: 233 GPTGDHTHVSTAVVGTYGYAAPE-YIETGHLKSQSDIWSFGVVLYEILTGRRVL 285
T D T V T Y APE + H DIWS G ++ E+LTGR +
Sbjct: 172 --TDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 220
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 98/234 (41%), Gaps = 46/234 (19%)
Query: 69 EATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNN--HGLQGHKQWLAEVQ 126
E + + +G G +GSV D + L VAVKKL+ + K+ E++
Sbjct: 16 EVPERYQNLSPVGSGAYGSVCAA----FDTKTG-LRVAVKKLSRPFQSIIHAKRTYRELR 70
Query: 127 FLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLED--------RLFSRAQPTLP 178
L + H N++ LL + P RSLE+ L +
Sbjct: 71 LLKHMKHENVIGLLDV----------------FTPARSLEEFNDVYLVTHLMGADLNNIV 114
Query: 179 WKTRLE------IILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLARE 232
+L +I GL Y+H +I+RD K SN+ ++ + + K+ DFGLAR
Sbjct: 115 KCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 171
Query: 233 GPTGDHTHVSTAVVGTYGYAAPE-YIETGHLKSQSDIWSFGVVLYEILTGRRVL 285
T D T V T Y APE + H DIWS G ++ E+LTGR +
Sbjct: 172 --TDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 220
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 98/234 (41%), Gaps = 46/234 (19%)
Query: 69 EATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNN--HGLQGHKQWLAEVQ 126
E + + +G G +GSV D + L VAVKKL+ + K+ E++
Sbjct: 39 EVPERYQNLSPVGSGAYGSVCAA----FDTKTG-LRVAVKKLSRPFQSIIHAKRTYRELR 93
Query: 127 FLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLED--------RLFSRAQPTLP 178
L + H N++ LL + P RSLE+ L +
Sbjct: 94 LLKHMKHENVIGLLDV----------------FTPARSLEEFNDVYLVTHLMGADLNNIV 137
Query: 179 WKTRLE------IILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLARE 232
+L +I GL Y+H +I+RD K SN+ ++ + + K+ DFGLAR
Sbjct: 138 KCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 194
Query: 233 GPTGDHTHVSTAVVGTYGYAAPE-YIETGHLKSQSDIWSFGVVLYEILTGRRVL 285
T D T V T Y APE + H DIWS G ++ E+LTGR +
Sbjct: 195 --TDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 243
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 98/234 (41%), Gaps = 46/234 (19%)
Query: 69 EATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNN--HGLQGHKQWLAEVQ 126
E + + +G G +GSV D + L VAVKKL+ + K+ E++
Sbjct: 15 EVPERYQNLSPVGSGAYGSVCAA----FDTKTG-LRVAVKKLSRPFQSIIHAKRTYRELR 69
Query: 127 FLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLED--------RLFSRAQPTLP 178
L + H N++ LL + P RSLE+ L +
Sbjct: 70 LLKHMKHENVIGLLDV----------------FTPARSLEEFNDVYLVTHLMGADLNNIV 113
Query: 179 WKTRLE------IILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLARE 232
+L +I GL Y+H +I+RD K SN+ ++ + + K+ DFGLAR
Sbjct: 114 KCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 170
Query: 233 GPTGDHTHVSTAVVGTYGYAAPE-YIETGHLKSQSDIWSFGVVLYEILTGRRVL 285
T D T V T Y APE + H DIWS G ++ E+LTGR +
Sbjct: 171 --TDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 219
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 98/234 (41%), Gaps = 46/234 (19%)
Query: 69 EATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNN--HGLQGHKQWLAEVQ 126
E + + +G G +GSV D + L VAVKKL+ + K+ E++
Sbjct: 38 EVPERYQNLSPVGSGAYGSVCAA----FDTKTG-LRVAVKKLSRPFQSIIHAKRTYRELR 92
Query: 127 FLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLED--------RLFSRAQPTLP 178
L + H N++ LL + P RSLE+ L +
Sbjct: 93 LLKHMKHENVIGLLDV----------------FTPARSLEEFNDVYLVTHLMGADLNNIV 136
Query: 179 WKTRLE------IILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLARE 232
+L +I GL Y+H +I+RD K SN+ ++ + + K+ DFGLAR
Sbjct: 137 KCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 193
Query: 233 GPTGDHTHVSTAVVGTYGYAAPE-YIETGHLKSQSDIWSFGVVLYEILTGRRVL 285
T D T V T Y APE + H DIWS G ++ E+LTGR +
Sbjct: 194 --TDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 242
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 98/234 (41%), Gaps = 46/234 (19%)
Query: 69 EATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNN--HGLQGHKQWLAEVQ 126
E + + +G G +GSV D + L VAVKKL+ + K+ E++
Sbjct: 30 EVPERYQNLSPVGSGAYGSVCAA----FDTKT-GLRVAVKKLSRPFQSIIHAKRTYRELR 84
Query: 127 FLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLED--------RLFSRAQPTLP 178
L + H N++ LL + P RSLE+ L +
Sbjct: 85 LLKHMKHENVIGLLDV----------------FTPARSLEEFNDVYLVTHLMGADLNNIV 128
Query: 179 WKTRLE------IILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLARE 232
+L +I GL Y+H +I+RD K SN+ ++ + + K+ DFGLAR
Sbjct: 129 KCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLARH 185
Query: 233 GPTGDHTHVSTAVVGTYGYAAPE-YIETGHLKSQSDIWSFGVVLYEILTGRRVL 285
T D T V T Y APE + H DIWS G ++ E+LTGR +
Sbjct: 186 --TDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 234
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 98/234 (41%), Gaps = 46/234 (19%)
Query: 69 EATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNN--HGLQGHKQWLAEVQ 126
E + + +G G +GSV D + L VAVKKL+ + K+ E++
Sbjct: 17 EVPERYQNLSPVGSGAYGSVCAA----FDTKTG-LRVAVKKLSRPFQSIIHAKRTYRELR 71
Query: 127 FLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLED--------RLFSRAQPTLP 178
L + H N++ LL + P RSLE+ L +
Sbjct: 72 LLKHMKHENVIGLLDV----------------FTPARSLEEFNDVYLVTHLMGADLNNIV 115
Query: 179 WKTRLE------IILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLARE 232
+L +I GL Y+H +I+RD K SN+ ++ + + K+ DFGLAR
Sbjct: 116 KCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 172
Query: 233 GPTGDHTHVSTAVVGTYGYAAPE-YIETGHLKSQSDIWSFGVVLYEILTGRRVL 285
T D T V T Y APE + H DIWS G ++ E+LTGR +
Sbjct: 173 --TDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 221
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 98/234 (41%), Gaps = 46/234 (19%)
Query: 69 EATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNN--HGLQGHKQWLAEVQ 126
E + + +G G +GSV D + L VAVKKL+ + K+ E++
Sbjct: 42 EVPERYQNLSPVGSGAYGSVCAA----FDTKTG-LRVAVKKLSRPFQSIIHAKRTYRELR 96
Query: 127 FLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLED--------RLFSRAQPTLP 178
L + H N++ LL + P RSLE+ L +
Sbjct: 97 LLKHMKHENVIGLLDV----------------FTPARSLEEFNDVYLVTHLMGADLNNIV 140
Query: 179 WKTRLE------IILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLARE 232
+L +I GL Y+H +I+RD K SN+ ++ + + K+ DFGLAR
Sbjct: 141 KCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 197
Query: 233 GPTGDHTHVSTAVVGTYGYAAPE-YIETGHLKSQSDIWSFGVVLYEILTGRRVL 285
T D T V T Y APE + H DIWS G ++ E+LTGR +
Sbjct: 198 --TDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 246
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 134/312 (42%), Gaps = 48/312 (15%)
Query: 65 QELREATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLN-NHGLQGHKQWLA 123
Q + ++++G G +G V K P G+ ++AVK++ Q K+ L
Sbjct: 44 QNFEVKADDLEPIMELGRGAYGVVEKMRHVP---SGQ--IMAVKRIRATVNSQEQKRLLM 98
Query: 124 EVQF-LGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLED---RLFSRAQPTLPW 179
++ + V P V G E + I L+ + SL+ ++ + Q T+P
Sbjct: 99 DLDISMRTVDCPFTVTFYGALFREGDVWICMELM-----DTSLDKFYKQVIDKGQ-TIPE 152
Query: 180 KTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHT 239
+I + + L +LH L VI+RD K SNVL++ + K+ DFG++ G D
Sbjct: 153 DILGKIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGIS--GYLVDSV 208
Query: 240 HVSTAVVGTYGYAAPEYI-----ETGHLKSQSDIWSFGVVLYEILTGRRVLER-NRP--T 291
T G Y APE I + G+ +SDIWS G+ + E+ R + P
Sbjct: 209 -AKTIDAGCKPYMAPERINPELNQKGY-SVKSDIWSLGITMIELAILRFPYDSWGTPFQQ 266
Query: 292 MEQKLLEWVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQV 351
++Q + E Q PAD KFS CLKKN +ERPT ++
Sbjct: 267 LKQVVEEPSPQLPAD--KFS----------------AEFVDFTSQCLKKNSKERPTYPEL 308
Query: 352 VESLKLAVQESE 363
++ + ES+
Sbjct: 309 MQHPFFTLHESK 320
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 96/234 (41%), Gaps = 46/234 (19%)
Query: 69 EATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNN--HGLQGHKQWLAEVQ 126
E + + +G G +GSV R VAVKKL+ + K+ E++
Sbjct: 25 EVPERYQNLSPVGSGAYGSVCAAFDTKTGHR-----VAVKKLSRPFQSIIHAKRTYRELR 79
Query: 127 FLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLED--------RLFSRAQPTLP 178
L + H N++ LL + P RSLE+ L +
Sbjct: 80 LLKHMKHENVIGLLDV----------------FTPARSLEEFNDVYLVTHLMGADLNNIV 123
Query: 179 WKTRLE------IILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLARE 232
+L +I GL Y+H +I+RD K SN+ ++ + + K+ DFGLAR
Sbjct: 124 KCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 180
Query: 233 GPTGDHTHVSTAVVGTYGYAAPE-YIETGHLKSQSDIWSFGVVLYEILTGRRVL 285
T D T V T Y APE + H DIWS G ++ E+LTGR +
Sbjct: 181 --TDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 229
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 108/248 (43%), Gaps = 28/248 (11%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNN-HGLQGH-KQWLAEVQFLGVVSHPNLV 137
IG G G V LD VA+KKL+ Q H K+ E+ + V+H N++
Sbjct: 33 IGSGAQGIVCAAYDAVLDRN-----VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNII 87
Query: 138 KLLGYCSTED--ERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAY 195
LL + + E LV E M + L Q L + ++ G+ +
Sbjct: 88 SLLNVFTPQKTLEEFQDVYLVMELM-----DANLCQVIQMELDHERMSYLLYQMLCGIKH 142
Query: 196 LHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPE 255
LH +I+RD K SN+++ + K+ DFGLAR T + + T V T Y APE
Sbjct: 143 LHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPE 196
Query: 256 YIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEW---VKQFPADGKKFSM 312
I K DIWS G ++ E++ ++L R ++Q W ++Q +F
Sbjct: 197 VILGMGYKENVDIWSVGCIMGEMVR-HKILFPGRDYIDQ----WNKVIEQLGTPCPEFMK 251
Query: 313 MIDPRLRN 320
+ P +RN
Sbjct: 252 KLQPTVRN 259
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 115/258 (44%), Gaps = 22/258 (8%)
Query: 32 NSALNRTARSLPSPRSIPELYKEKEHHLRVFDMQELREATNGFNRMLKIGEGGFGSVYKG 91
+++L + A S +P ++ +KE+ R + + E + + +G G +GSV
Sbjct: 13 STSLYKKAGSAAAPFTMS--HKERPTFYRQELNKTIWEVPERYQTLSPVGSGAYGSVCSS 70
Query: 92 TIRPLDGRGEPLVVAVKKLNN--HGLQGHKQWLAEVQFLGVVSHPNLVKLLG-YCSTEDE 148
D + L +AVKKL+ + K+ E++ L + H N++ LL +
Sbjct: 71 ----YDVKSG-LKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPATSL 125
Query: 149 RGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRD 208
+ + ++ L + + Q + +I GL Y+H +I+RD
Sbjct: 126 EEFNDVYLVTHLMGADLNN--IVKCQKLTDDHVQF-LIYQILRGLKYIHSA---DIIHRD 179
Query: 209 FKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPE-YIETGHLKSQSD 267
K SN+ ++ + + K+ DFGLAR T D T V T Y APE + H D
Sbjct: 180 LKPSNLAVNEDCELKILDFGLARH--TDDEM---TGYVATRWYRAPEIMLNWMHYNMTVD 234
Query: 268 IWSFGVVLYEILTGRRVL 285
IWS G ++ E+LTGR +
Sbjct: 235 IWSVGCIMAELLTGRTLF 252
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 96/234 (41%), Gaps = 46/234 (19%)
Query: 69 EATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNN--HGLQGHKQWLAEVQ 126
E + + +G G +GSV R VAVKKL+ + K+ E++
Sbjct: 15 EVPERYQNLSPVGSGAYGSVCAAFDTKTGHR-----VAVKKLSRPFQSIIHAKRTYRELR 69
Query: 127 FLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLED--------RLFSRAQPTLP 178
L + H N++ LL + P RSLE+ L +
Sbjct: 70 LLKHMKHENVIGLLDV----------------FTPARSLEEFNDVYLVTHLMGADLNNIV 113
Query: 179 WKTRLE------IILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLARE 232
+L +I GL Y+H +I+RD K SN+ ++ + + K+ DFGLAR
Sbjct: 114 KCAKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 170
Query: 233 GPTGDHTHVSTAVVGTYGYAAPE-YIETGHLKSQSDIWSFGVVLYEILTGRRVL 285
T D T V T Y APE + H DIWS G ++ E+LTGR +
Sbjct: 171 --TDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 219
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 95/207 (45%), Gaps = 23/207 (11%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKL--NNHGLQGHKQWLAEVQFLGVVSHPNLV 137
+GEG +G V K + GR +VA+KK ++ K + E++ L + H NLV
Sbjct: 33 VGEGSYGMVMKCRNKD-TGR----IVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLV 87
Query: 138 KLLGYCSTEDERGIQRLLVYEYMPNRSLED-RLFSRAQPTLPWKTRLEIILGAAEGLAYL 196
LL C + + LV+E++ + L+D LF L ++ + + G+ +
Sbjct: 88 NLLEVCKKKK----RWYLVFEFVDHTILDDLELFPNG---LDYQVVQKYLFQIINGIGFC 140
Query: 197 HEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEY 256
H +I+RD K N+L+ + KL DFG AR V V T Y APE
Sbjct: 141 HSH---NIIHRDIKPENILVSQSGVVKLCDFGFAR--TLAAPGEVYDDEVATRWYRAPEL 195
Query: 257 IETGHLK--SQSDIWSFGVVLYEILTG 281
+ G +K D+W+ G ++ E+ G
Sbjct: 196 L-VGDVKYGKAVDVWAIGCLVTEMFMG 221
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 110/254 (43%), Gaps = 28/254 (11%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNN-HGLQGH-KQWLAEVQFLGVV 131
+ + IG G G V LD VA+KKL+ Q H K+ E+ + V
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRN-----VAIKKLSRPFQNQTHAKRAYRELVLMKCV 80
Query: 132 SHPNLVKLLGYCSTED--ERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGA 189
+H N++ LL + + E LV E M + L Q L + ++
Sbjct: 81 NHKNIISLLNVFTPQKTLEEFQDVYLVMELM-----DANLCQVIQMELDHERMSYLLYQM 135
Query: 190 AEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTY 249
G+ +LH +I+RD K SN+++ + K+ DFGLAR T + + T V T
Sbjct: 136 LCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTR 189
Query: 250 GYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEW---VKQFPAD 306
Y APE I K DIWS G ++ E++ ++L R ++Q W ++Q
Sbjct: 190 YYRAPEVILGMGYKENVDIWSVGCIMGEMVR-HKILFPGRDYIDQ----WNKVIEQLGTP 244
Query: 307 GKKFSMMIDPRLRN 320
+F + P +RN
Sbjct: 245 CPEFMKKLQPTVRN 258
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 108/248 (43%), Gaps = 28/248 (11%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNN-HGLQGH-KQWLAEVQFLGVVSHPNLV 137
IG G G V LD VA+KKL+ Q H K+ E+ + V+H N++
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN-----VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNII 86
Query: 138 KLLGYCSTED--ERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAY 195
LL + + E LV E M + L Q L + ++ G+ +
Sbjct: 87 SLLNVFTPQKTLEEFQDVYLVMELM-----DANLXQVIQMELDHERMSYLLYQMLXGIKH 141
Query: 196 LHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPE 255
LH +I+RD K SN+++ + K+ DFGLAR T + + T V T Y APE
Sbjct: 142 LHSA---GIIHRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPE 195
Query: 256 YIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEW---VKQFPADGKKFSM 312
I K DIWS G ++ E++ ++L R ++Q W ++Q +F
Sbjct: 196 VILGMGYKENVDIWSVGCIMGEMVR-HKILFPGRDYIDQ----WNKVIEQLGTPCPEFMK 250
Query: 313 MIDPRLRN 320
+ P +RN
Sbjct: 251 KLQPTVRN 258
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 108/248 (43%), Gaps = 28/248 (11%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNN-HGLQGH-KQWLAEVQFLGVVSHPNLV 137
IG G G V LD VA+KKL+ Q H K+ E+ + V+H N++
Sbjct: 31 IGSGAQGIVCAAYDAVLDRN-----VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNII 85
Query: 138 KLLGYCSTED--ERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAY 195
LL + + E LV E M + L Q L + ++ G+ +
Sbjct: 86 SLLNVFTPQKTLEEFQDVYLVMELM-----DANLCQVIQMELDHERMSYLLYQMLCGIKH 140
Query: 196 LHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPE 255
LH +I+RD K SN+++ + K+ DFGLAR T + + T V T Y APE
Sbjct: 141 LHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPE 194
Query: 256 YIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEW---VKQFPADGKKFSM 312
I K DIWS G ++ E++ ++L R ++Q W ++Q +F
Sbjct: 195 VILGMGYKENVDIWSVGCIMGEMVR-HKILFPGRDYIDQ----WNKVIEQLGTPCPEFMK 249
Query: 313 MIDPRLRN 320
+ P +RN
Sbjct: 250 KLQPTVRN 257
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 96/234 (41%), Gaps = 46/234 (19%)
Query: 69 EATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNN--HGLQGHKQWLAEVQ 126
E + + +G G +GSV R VAVKKL+ + K+ E++
Sbjct: 38 EVPERYQNLSPVGSGAYGSVCAAFDTKTGHR-----VAVKKLSRPFQSIIHAKRTYRELR 92
Query: 127 FLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLED--------RLFSRAQPTLP 178
L + H N++ LL + P RSLE+ L +
Sbjct: 93 LLKHMKHENVIGLLDV----------------FTPARSLEEFNDVYLVTHLMGADLNNIV 136
Query: 179 WKTRLE------IILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLARE 232
+L +I GL Y+H +I+RD K SN+ ++ + + K+ DFGLAR
Sbjct: 137 KCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 193
Query: 233 GPTGDHTHVSTAVVGTYGYAAPE-YIETGHLKSQSDIWSFGVVLYEILTGRRVL 285
T D T V T Y APE + H DIWS G ++ E+LTGR +
Sbjct: 194 --TDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 242
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 119/270 (44%), Gaps = 30/270 (11%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSH 133
F R+ +G G FG V ++ ++ + + K L+ + L E + L V+
Sbjct: 43 FERIKTLGTGSFGRVM--LVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 134 PNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRL---EIILGAA 190
P LVKL S +D + +V EY+P + L + P R +I+L
Sbjct: 101 PFLVKL--EFSFKDNSNL--YMVMEYVPGGEMFSHLRRIGRFXEP-HARFYAAQIVLT-- 153
Query: 191 EGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAR--EGPTGDHTHVSTAVVGT 248
YLH + +IYRD K N+L+D +++DFG A+ +G T + GT
Sbjct: 154 --FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW-------XLCGT 201
Query: 249 YGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPT-MEQKLLEWVKQFPADG 307
Y APE I + D W+ GV++YE+ G ++P + +K++ +FP+
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS-- 259
Query: 308 KKFSMMIDPRLRNQYSINAARRVAKLADNC 337
FS + LRN ++ +R L +
Sbjct: 260 -HFSSDLKDLLRNLLQVDLTKRFGNLKNGV 288
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 108/248 (43%), Gaps = 28/248 (11%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNN-HGLQGH-KQWLAEVQFLGVVSHPNLV 137
IG G G V LD VA+KKL+ Q H K+ E+ + V+H N++
Sbjct: 25 IGSGAQGIVCAAYDAVLDRN-----VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNII 79
Query: 138 KLLGYCSTED--ERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAY 195
LL + + E LV E M + L Q L + ++ G+ +
Sbjct: 80 SLLNVFTPQKTLEEFQDVYLVMELM-----DANLXQVIQMELDHERMSYLLYQMLXGIKH 134
Query: 196 LHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPE 255
LH +I+RD K SN+++ + K+ DFGLAR T + + T V T Y APE
Sbjct: 135 LHSA---GIIHRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPE 188
Query: 256 YIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEW---VKQFPADGKKFSM 312
I K DIWS G ++ E++ ++L R ++Q W ++Q +F
Sbjct: 189 VILGMGYKENVDIWSVGCIMGEMVR-HKILFPGRDYIDQ----WNKVIEQLGTPCPEFMK 243
Query: 313 MIDPRLRN 320
+ P +RN
Sbjct: 244 KLQPTVRN 251
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 98/234 (41%), Gaps = 46/234 (19%)
Query: 69 EATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNN--HGLQGHKQWLAEVQ 126
E + + +G G +GSV D + L VAVKKL+ + K+ E++
Sbjct: 25 EVPERYQNLSPVGSGAYGSVCAA----FDTKT-GLRVAVKKLSRPFQSIIHAKRTYRELR 79
Query: 127 FLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLED--------RLFSRAQPTLP 178
L + H N++ LL + P RSLE+ L +
Sbjct: 80 LLKHMKHENVIGLLDV----------------FTPARSLEEFNDVYLVTHLMGADLNNIV 123
Query: 179 WKTRLE------IILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLARE 232
+L +I GL Y+H +I+RD K SN+ ++ + + K+ DFGLAR
Sbjct: 124 KCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDSELKILDFGLARH 180
Query: 233 GPTGDHTHVSTAVVGTYGYAAPE-YIETGHLKSQSDIWSFGVVLYEILTGRRVL 285
T D T V T Y APE + H DIWS G ++ E+LTGR +
Sbjct: 181 --TDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 229
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 96/234 (41%), Gaps = 46/234 (19%)
Query: 69 EATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNN--HGLQGHKQWLAEVQ 126
E + + +G G +GSV R VAVKKL+ + K+ E++
Sbjct: 39 EVPERYQNLSPVGSGAYGSVCAAFDTKTGHR-----VAVKKLSRPFQSIIHAKRTYRELR 93
Query: 127 FLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLED--------RLFSRAQPTLP 178
L + H N++ LL + P RSLE+ L +
Sbjct: 94 LLKHMKHENVIGLLDV----------------FTPARSLEEFNDVYLVTHLMGADLNNIV 137
Query: 179 WKTRLE------IILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLARE 232
+L +I GL Y+H +I+RD K SN+ ++ + + K+ DFGLAR
Sbjct: 138 KCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 194
Query: 233 GPTGDHTHVSTAVVGTYGYAAPE-YIETGHLKSQSDIWSFGVVLYEILTGRRVL 285
T D T V T Y APE + H DIWS G ++ E+LTGR +
Sbjct: 195 --TDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 243
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 108/248 (43%), Gaps = 28/248 (11%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNN-HGLQGH-KQWLAEVQFLGVVSHPNLV 137
IG G G V LD VA+KKL+ Q H K+ E+ + V+H N++
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN-----VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNII 86
Query: 138 KLLGYCSTED--ERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAY 195
LL + + E LV E M + L Q L + ++ G+ +
Sbjct: 87 SLLNVFTPQKTLEEFQDVYLVMELM-----DANLCQVIQMELDHERMSYLLYQMLCGIKH 141
Query: 196 LHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPE 255
LH +I+RD K SN+++ + K+ DFGLAR T + + T V T Y APE
Sbjct: 142 LHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPE 195
Query: 256 YIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEW---VKQFPADGKKFSM 312
I K DIWS G ++ E++ ++L R ++Q W ++Q +F
Sbjct: 196 VILGMGYKENVDIWSVGCIMGEMVR-HKILFPGRDYIDQ----WNKVIEQLGTPCPEFMK 250
Query: 313 MIDPRLRN 320
+ P +RN
Sbjct: 251 KLQPTVRN 258
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 119/270 (44%), Gaps = 30/270 (11%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSH 133
F R+ +G G FG V ++ ++ + + K L+ + L E + L V+
Sbjct: 43 FERIKTLGTGSFGRVM--LVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 134 PNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRL---EIILGAA 190
P LVKL S +D + +V EY+P + L + P R +I+L
Sbjct: 101 PFLVKL--EFSFKDNSNL--YMVMEYVPGGEMFSHLRRIGRFXEP-HARFYAAQIVLT-- 153
Query: 191 EGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAR--EGPTGDHTHVSTAVVGT 248
YLH + +IYRD K N+L+D +++DFG A+ +G T + GT
Sbjct: 154 --FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW-------XLCGT 201
Query: 249 YGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPT-MEQKLLEWVKQFPADG 307
Y APE I + D W+ GV++YE+ G ++P + +K++ +FP+
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS-- 259
Query: 308 KKFSMMIDPRLRNQYSINAARRVAKLADNC 337
FS + LRN ++ +R L +
Sbjct: 260 -HFSSDLKDLLRNLLQVDLTKRFGNLKNGV 288
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 119/270 (44%), Gaps = 30/270 (11%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSH 133
F R+ +G G FG V ++ ++ + + K L+ + L E + L V+
Sbjct: 44 FERIKTLGTGSFGRVM--LVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 134 PNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRL---EIILGAA 190
P LVKL S +D + +V EY+P + L + P R +I+L
Sbjct: 102 PFLVKL--EFSFKDNSNL--YMVMEYVPGGEMFSHLRRIGRFXEP-HARFYAAQIVLT-- 154
Query: 191 EGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAR--EGPTGDHTHVSTAVVGT 248
YLH + +IYRD K N+L+D +++DFG A+ +G T + GT
Sbjct: 155 --FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW-------XLCGT 202
Query: 249 YGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPT-MEQKLLEWVKQFPADG 307
Y APE I + D W+ GV++YE+ G ++P + +K++ +FP+
Sbjct: 203 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS-- 260
Query: 308 KKFSMMIDPRLRNQYSINAARRVAKLADNC 337
FS + LRN ++ +R L +
Sbjct: 261 -HFSSDLKDLLRNLLQVDLTKRFGNLKNGV 289
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 108/248 (43%), Gaps = 28/248 (11%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNN-HGLQGH-KQWLAEVQFLGVVSHPNLV 137
IG G G V LD VA+KKL+ Q H K+ E+ + V+H N++
Sbjct: 26 IGSGAQGIVCAAYDAVLDRN-----VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNII 80
Query: 138 KLLGYCSTED--ERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAY 195
LL + + E LV E M + L Q L + ++ G+ +
Sbjct: 81 SLLNVFTPQKTLEEFQDVYLVMELM-----DANLCQVIQMELDHERMSYLLYQMLCGIKH 135
Query: 196 LHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPE 255
LH +I+RD K SN+++ + K+ DFGLAR T + + T V T Y APE
Sbjct: 136 LHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPE 189
Query: 256 YIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEW---VKQFPADGKKFSM 312
I K DIWS G ++ E++ ++L R ++Q W ++Q +F
Sbjct: 190 VILGMGYKENVDIWSVGCIMGEMVR-HKILFPGRDYIDQ----WNKVIEQLGTPCPEFMK 244
Query: 313 MIDPRLRN 320
+ P +RN
Sbjct: 245 KLQPTVRN 252
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 98/234 (41%), Gaps = 46/234 (19%)
Query: 69 EATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNN--HGLQGHKQWLAEVQ 126
E + + +G G +GSV D + L VAVKKL+ + K+ E++
Sbjct: 21 EVPERYQNLSPVGSGAYGSVCAA----FDTKT-GLRVAVKKLSRPFQSIIHAKRTYRELR 75
Query: 127 FLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLED--------RLFSRAQPTLP 178
L + H N++ LL + P RSLE+ L +
Sbjct: 76 LLKHMKHENVIGLLDV----------------FTPARSLEEFNDVYLVTHLMGADLNNIV 119
Query: 179 WKTRLE------IILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLARE 232
+L +I GL Y+H +I+RD K SN+ ++ + + K+ DFGLAR
Sbjct: 120 KCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDSELKILDFGLARH 176
Query: 233 GPTGDHTHVSTAVVGTYGYAAPE-YIETGHLKSQSDIWSFGVVLYEILTGRRVL 285
T D T V T Y APE + H DIWS G ++ E+LTGR +
Sbjct: 177 --TDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 225
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 96/234 (41%), Gaps = 46/234 (19%)
Query: 69 EATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNN--HGLQGHKQWLAEVQ 126
E + + +G G +GSV R VAVKKL+ + K+ E++
Sbjct: 15 EVPERYQNLSPVGSGAYGSVCAAFDTKTGHR-----VAVKKLSRPFQSIIHAKRTYRELR 69
Query: 127 FLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLED--------RLFSRAQPTLP 178
L + H N++ LL + P RSLE+ L +
Sbjct: 70 LLKHMKHENVIGLLDV----------------FTPARSLEEFNDVYLVTHLMGADLNNIV 113
Query: 179 WKTRLE------IILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLARE 232
+L +I GL Y+H +I+RD K SN+ ++ + + K+ DFGLAR
Sbjct: 114 KCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 170
Query: 233 GPTGDHTHVSTAVVGTYGYAAPE-YIETGHLKSQSDIWSFGVVLYEILTGRRVL 285
T D T V T Y APE + H DIWS G ++ E+LTGR +
Sbjct: 171 --TDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 219
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 128/298 (42%), Gaps = 39/298 (13%)
Query: 51 LYKEKEHHLRVFDMQELREAT-NGFNRMLKIGEGGFGSVY------KGTIRPLDGRGEPL 103
L K KE L+ ++ A + F+R+ +G G FG V G + +
Sbjct: 40 LAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQK 99
Query: 104 VVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNR 163
VV +K++ + L E + L V+ P LVKL S +D + +V EY+
Sbjct: 100 VVKLKQIEHT--------LNEKRILQAVNFPFLVKL--EFSFKDNSNL--YMVMEYVAGG 147
Query: 164 SLEDRLFSRAQPTLPWKTRL---EIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNF 220
+ L + + P R +I+L YLH + +IYRD K N+L+D
Sbjct: 148 EMFSHLRRIGRFSEP-HARFYAAQIVLT----FEYLHS---LDLIYRDLKPENLLIDQQG 199
Query: 221 KPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILT 280
+++DFG A+ T + GT Y APE I + D W+ GV++YE+
Sbjct: 200 YIQVTDFGFAKRVKGATWT-----LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 254
Query: 281 GRRVLERNRPT-MEQKLLEWVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNC 337
G ++P + +K++ +FP+ FS + LRN ++ +R L +
Sbjct: 255 GYPPFFADQPIQIYEKIVSGKVRFPS---HFSSDLKDLLRNLLQVDLTKRFGNLKNGV 309
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 108/248 (43%), Gaps = 28/248 (11%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNN-HGLQGH-KQWLAEVQFLGVVSHPNLV 137
IG G G V LD VA+KKL+ Q H K+ E+ + V+H N++
Sbjct: 33 IGSGAQGIVCAAYDAVLDRN-----VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNII 87
Query: 138 KLLGYCSTED--ERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAY 195
LL + + E LV E M + L Q L + ++ G+ +
Sbjct: 88 SLLNVFTPQKTLEEFQDVYLVMELM-----DANLCQVIQMELDHERMSYLLYQMLCGIKH 142
Query: 196 LHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPE 255
LH +I+RD K SN+++ + K+ DFGLAR T + + T V T Y APE
Sbjct: 143 LHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPE 196
Query: 256 YIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEW---VKQFPADGKKFSM 312
I K DIWS G ++ E++ ++L R ++Q W ++Q +F
Sbjct: 197 VILGMGYKENVDIWSVGCIMGEMVR-HKILFPGRDYIDQ----WNKVIEQLGTPCPEFMK 251
Query: 313 MIDPRLRN 320
+ P +RN
Sbjct: 252 KLQPTVRN 259
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 110/254 (43%), Gaps = 28/254 (11%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNN-HGLQGH-KQWLAEVQFLGVV 131
+ + IG G G V LD VA+KKL+ Q H K+ E+ + V
Sbjct: 64 YQNLKPIGSGAQGIVCAAYDAVLDRN-----VAIKKLSRPFQNQTHAKRAYRELVLMKCV 118
Query: 132 SHPNLVKLLGYCSTED--ERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGA 189
+H N++ LL + + E LV E M + L Q L + ++
Sbjct: 119 NHKNIISLLNVFTPQKTLEEFQDVYLVMELM-----DANLCQVIQMELDHERMSYLLYQM 173
Query: 190 AEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTY 249
G+ +LH +I+RD K SN+++ + K+ DFGLAR T + + T V T
Sbjct: 174 LCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTR 227
Query: 250 GYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEW---VKQFPAD 306
Y APE I K DIWS G ++ E++ ++L R ++Q W ++Q
Sbjct: 228 YYRAPEVILGMGYKENVDIWSVGCIMGEMVR-HKILFPGRDYIDQ----WNKVIEQLGTP 282
Query: 307 GKKFSMMIDPRLRN 320
+F + P +RN
Sbjct: 283 CPEFMKKLQPTVRN 296
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 118/270 (43%), Gaps = 30/270 (11%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSH 133
F R+ +G G FG V ++ ++ + + K L+ + L E + L V+
Sbjct: 43 FERIKTLGTGSFGRVM--LVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 134 PNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRL---EIILGAA 190
P LVKL S +D + +V EY P + L + P R +I+L
Sbjct: 101 PFLVKL--EFSFKDNSNL--YMVMEYAPGGEMFSHLRRIGRFXEP-HARFYAAQIVLT-- 153
Query: 191 EGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAR--EGPTGDHTHVSTAVVGT 248
YLH + +IYRD K N+++D K++DFG A+ +G T + GT
Sbjct: 154 --FEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRT-------WXLCGT 201
Query: 249 YGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPT-MEQKLLEWVKQFPADG 307
Y APE I + D W+ GV++YE+ G ++P + +K++ +FP+
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS-- 259
Query: 308 KKFSMMIDPRLRNQYSINAARRVAKLADNC 337
FS + LRN ++ +R L +
Sbjct: 260 -HFSSDLKDLLRNLLQVDLTKRFGNLKNGV 288
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 110/254 (43%), Gaps = 28/254 (11%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNN-HGLQGH-KQWLAEVQFLGVV 131
+ + IG G G V LD VA+KKL+ Q H K+ E+ + V
Sbjct: 20 YQNLKPIGSGAQGIVCAAYDAVLDRN-----VAIKKLSRPFQNQTHAKRAYRELVLMKCV 74
Query: 132 SHPNLVKLLGYCSTED--ERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGA 189
+H N++ LL + + E LV E M + L Q L + ++
Sbjct: 75 NHKNIISLLNVFTPQKTLEEFQDVYLVMELM-----DANLCQVIQMELDHERMSYLLYQM 129
Query: 190 AEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTY 249
G+ +LH +I+RD K SN+++ + K+ DFGLAR T + + T V T
Sbjct: 130 LCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTR 183
Query: 250 GYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEW---VKQFPAD 306
Y APE I K DIWS G ++ E++ ++L R ++Q W ++Q
Sbjct: 184 YYRAPEVILGMGYKENVDIWSVGCIMGEMVR-HKILFPGRDYIDQ----WNKVIEQLGTP 238
Query: 307 GKKFSMMIDPRLRN 320
+F + P +RN
Sbjct: 239 CPEFMKKLQPTVRN 252
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 108/248 (43%), Gaps = 28/248 (11%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNN-HGLQGH-KQWLAEVQFLGVVSHPNLV 137
IG G G V LD VA+KKL+ Q H K+ E+ + V+H N++
Sbjct: 25 IGSGAQGIVCAAYDAVLDRN-----VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNII 79
Query: 138 KLLGYCSTED--ERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAY 195
LL + + E LV E M + L Q L + ++ G+ +
Sbjct: 80 SLLNVFTPQKTLEEFQDVYLVMELM-----DANLCQVIQMELDHERMSYLLYQMLCGIKH 134
Query: 196 LHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPE 255
LH +I+RD K SN+++ + K+ DFGLAR T + + T V T Y APE
Sbjct: 135 LHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPE 188
Query: 256 YIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEW---VKQFPADGKKFSM 312
I K DIWS G ++ E++ ++L R ++Q W ++Q +F
Sbjct: 189 VILGMGYKENVDIWSVGCIMGEMVR-HKILFPGRDYIDQ----WNKVIEQLGTPCPEFMK 243
Query: 313 MIDPRLRN 320
+ P +RN
Sbjct: 244 KLQPTVRN 251
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 130/306 (42%), Gaps = 55/306 (17%)
Query: 51 LYKEKEHHLRVFDMQELREA-TNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKK 109
L K KE L+ ++ A + F R+ +G G FG V ++V K+
Sbjct: 40 LAKAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRV--------------MLVKHKE 85
Query: 110 LNNH------------GLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVY 157
NH L+ + L E + L V+ P LVKL S +D + +V
Sbjct: 86 TGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL--EFSFKDNSNL--YMVM 141
Query: 158 EYMPNRSLEDRLFSRAQPTLPWKTRL---EIILGAAEGLAYLHEGLEIQVIYRDFKTSNV 214
EY+P + L + + P R +I+L YLH + +IYRD K N+
Sbjct: 142 EYVPGGEMFSHLRRIGRFSEP-HARFYAAQIVLT----FEYLHS---LDLIYRDLKPENL 193
Query: 215 LLDGNFKPKLSDFGLAR--EGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFG 272
L+D +++DFG A+ +G T + GT Y APE I + D W+ G
Sbjct: 194 LIDQQGYIQVTDFGFAKRVKGRT-------WXLCGTPEYLAPEIILSKGYNKAVDWWALG 246
Query: 273 VVLYEILTGRRVLERNRPT-MEQKLLEWVKQFPADGKKFSMMIDPRLRNQYSINAARRVA 331
V++YE+ G ++P + +K++ +FP+ FS + LRN ++ +R
Sbjct: 247 VLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS---HFSSDLKDLLRNLLQVDLTKRFG 303
Query: 332 KLADNC 337
L +
Sbjct: 304 NLKNGV 309
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 119/270 (44%), Gaps = 30/270 (11%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSH 133
F R+ +G G FG V ++ ++ + + K L+ + L E + L V+
Sbjct: 43 FERIKTLGTGSFGRVM--LVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 134 PNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRL---EIILGAA 190
P LVKL S +D + +V EY+ + L + + P R +I+L
Sbjct: 101 PFLVKL--EFSFKDNSNL--YMVMEYVAGGEMFSHLRRIGRFSEP-HARFYAAQIVLT-- 153
Query: 191 EGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAR--EGPTGDHTHVSTAVVGT 248
YLH + +IYRD K N+L+D +++DFG A+ +G T + GT
Sbjct: 154 --FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW-------XLCGT 201
Query: 249 YGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPT-MEQKLLEWVKQFPADG 307
Y APE I + D W+ GV++YE+ G ++P + +K++ +FP+
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS-- 259
Query: 308 KKFSMMIDPRLRNQYSINAARRVAKLADNC 337
FS + LRN ++ +R L D
Sbjct: 260 -HFSSDLKDLLRNLLQVDLTKRFGNLKDGV 288
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 96/219 (43%), Gaps = 28/219 (12%)
Query: 71 TNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGV 130
++ + R+ K+G G +G V + L G E + +KK + L EV L
Sbjct: 3 SDRYQRVKKLGSGAYGEVLLCKDK-LTG-AERAIKIIKKSSVTTTSNSGALLDEVAVLKQ 60
Query: 131 VSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRL-----FSRAQPTLPWKTRLEI 185
+ HPN++KL Y ED+R LV E L D + FS + K L
Sbjct: 61 LDHPNIMKL--YEFFEDKRNY--YLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLS- 115
Query: 186 ILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKP---KLSDFGLAREGPTGDHTHVS 242
G YLH+ +++RD K N+LL+ + K+ DFGL+ G
Sbjct: 116 ------GTTYLHKH---NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKM--- 163
Query: 243 TAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTG 281
+GT Y APE + + + D+WS GV+LY +L G
Sbjct: 164 KERLGTAYYIAPEVLRKKY-DEKCDVWSCGVILYILLCG 201
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 98/234 (41%), Gaps = 46/234 (19%)
Query: 69 EATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNN--HGLQGHKQWLAEVQ 126
E + + +G G +GSV D + L VAVKKL+ + K+ E++
Sbjct: 19 EVPERYQNLSPVGSGAYGSVCAA----FDTKT-GLRVAVKKLSRPFQSIIHAKRTYRELR 73
Query: 127 FLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLED--------RLFSRAQPTLP 178
L + H N++ LL + P RSLE+ L +
Sbjct: 74 LLKHMKHENVIGLLDV----------------FTPARSLEEFNDVYLVTHLMGADLNNIV 117
Query: 179 WKTRLE------IILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLARE 232
+L +I GL Y+H +I+RD K SN+ ++ + + K+ D+GLAR
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDYGLARH 174
Query: 233 GPTGDHTHVSTAVVGTYGYAAPE-YIETGHLKSQSDIWSFGVVLYEILTGRRVL 285
T D T V T Y APE + H DIWS G ++ E+LTGR +
Sbjct: 175 --TDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 108/248 (43%), Gaps = 28/248 (11%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNN-HGLQGH-KQWLAEVQFLGVVSHPNLV 137
IG G G V LD VA+KKL+ Q H K+ E+ + V+H N++
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN-----VAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNII 86
Query: 138 KLLGYCSTED--ERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAY 195
LL + + E LV E M + L Q L + ++ G+ +
Sbjct: 87 SLLNVFTPQKTLEEFQDVYLVMELM-----DANLXQVIQMELDHERMSYLLYQMLXGIKH 141
Query: 196 LHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPE 255
LH +I+RD K SN+++ + K+ DFGLAR T + + T V T Y APE
Sbjct: 142 LHSA---GIIHRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPE 195
Query: 256 YIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEW---VKQFPADGKKFSM 312
I K DIWS G ++ E++ ++L R ++Q W ++Q +F
Sbjct: 196 VILGMGYKENVDIWSVGCIMGEMVR-HKILFPGRDYIDQ----WNKVIEQLGTPCPEFMK 250
Query: 313 MIDPRLRN 320
+ P +RN
Sbjct: 251 KLQPTVRN 258
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 119/270 (44%), Gaps = 30/270 (11%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSH 133
F R+ +G G FG V ++ ++ + + K L+ + L E + L V+
Sbjct: 43 FERIKTLGTGSFGRVM--LVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 134 PNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRL---EIILGAA 190
P LVKL S +D + +V EY P + L + + P R +I+L
Sbjct: 101 PFLVKL--EFSFKDNSNL--YMVMEYAPGGEMFSHLRRIGRFSEP-HARFYAAQIVLT-- 153
Query: 191 EGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAR--EGPTGDHTHVSTAVVGT 248
YLH + +IYRD K N+++D +++DFG A+ +G T + GT
Sbjct: 154 --FEYLHS---LDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGRT-------WXLCGT 201
Query: 249 YGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPT-MEQKLLEWVKQFPADG 307
Y APE I + D W+ GV++YE+ G ++P + +K++ +FP+
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS-- 259
Query: 308 KKFSMMIDPRLRNQYSINAARRVAKLADNC 337
FS + LRN ++ +R L +
Sbjct: 260 -HFSSDLKDLLRNLLQVDLTKRFGNLKNGV 288
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 98/215 (45%), Gaps = 20/215 (9%)
Query: 71 TNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGV 130
++ + R+ K+G G +G V + L G E + +KK + L EV L
Sbjct: 20 SDRYQRVKKLGSGAYGEVLLCKDK-LTG-AERAIKIIKKSSVTTTSNSGALLDEVAVLKQ 77
Query: 131 VSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAA 190
+ HPN++KL Y ED+R LV E L D + R + + + +I+
Sbjct: 78 LDHPNIMKL--YEFFEDKRNY--YLVMEVYRGGELFDEIILRQKFS---EVDAAVIMKQV 130
Query: 191 -EGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKP---KLSDFGLAREGPTGDHTHVSTAVV 246
G YLH+ +++RD K N+LL+ + K+ DFGL+ G +
Sbjct: 131 LSGTTYLHKH---NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKM---KERL 184
Query: 247 GTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTG 281
GT Y APE + + + D+WS GV+LY +L G
Sbjct: 185 GTAYYIAPEVLRKKY-DEKCDVWSCGVILYILLCG 218
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 135/301 (44%), Gaps = 49/301 (16%)
Query: 51 LYKEKEHHLRVFDMQELREA-TNGFNRMLKIGEGGFGSV----YKGT-----IRPLDGRG 100
L K KE L+ ++ A + F R+ +G G FG V +K T ++ LD +
Sbjct: 12 LAKAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQK 71
Query: 101 EPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYM 160
VV +K++ + L E + L V+ P LVKL S +D + +V EY+
Sbjct: 72 ---VVKLKQIEHT--------LNEKRILQAVNFPFLVKL--EFSFKDNSNL--YMVMEYV 116
Query: 161 PNRSLEDRLFSRAQPTLPWKTRL---EIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLD 217
P + L + + P R +I+L YLH + +IYRD K N+L+D
Sbjct: 117 PGGEMFSHLRRIGRFSEP-HARFYAAQIVLT----FEYLHS---LDLIYRDLKPENLLID 168
Query: 218 GNFKPKLSDFGLAR--EGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVL 275
+++DFG A+ +G T + GT Y APE I + D W+ GV++
Sbjct: 169 QQGYIQVTDFGFAKRVKGRTW-------XLCGTPEYLAPEIILSKGYNKAVDWWALGVLI 221
Query: 276 YEILTGRRVLERNRPT-MEQKLLEWVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLA 334
YE+ G ++P + +K++ +FP+ FS + LRN ++ +R L
Sbjct: 222 YEMAAGYPPFFADQPIQIYEKIVSGKVRFPS---HFSSDLKDLLRNLLQVDLTKRFGNLK 278
Query: 335 D 335
+
Sbjct: 279 N 279
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 121/281 (43%), Gaps = 21/281 (7%)
Query: 64 MQELREATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLA 123
M T+ + ++G+G F V + + ++ KKL+ + H++
Sbjct: 23 MATCTRFTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSA---RDHQKLER 79
Query: 124 EVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRL 183
E + ++ HPN+V+L S E G LV++ + L + + +R + +
Sbjct: 80 EARICRLLKHPNIVRLHDSIS---EEGFH-YLVFDLVTGGELFEDIVAREYYSEADASH- 134
Query: 184 EIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFK---PKLSDFGLAREGPTGDHTH 240
I E + ++H+ +++RD K N+LL K KL+DFGLA E
Sbjct: 135 -CIHQILESVNHIHQH---DIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAW 190
Query: 241 VSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGR-RVLERNRPTMEQKLLEW 299
A GT GY +PE + DIW+ GV+LY +L G + ++ + Q++
Sbjct: 191 FGFA--GTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAG 248
Query: 300 VKQFPADGKKFSMMIDPRLRNQY-SINAARRVAKLADNCLK 339
FP+ L NQ +IN A+R+ AD LK
Sbjct: 249 AYDFPSPEWDTVTPEAKNLINQMLTINPAKRIT--ADQALK 287
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 135/303 (44%), Gaps = 49/303 (16%)
Query: 51 LYKEKEHHLRVFDMQELREA-TNGFNRMLKIGEGGFGSV----YKGT-----IRPLDGRG 100
L K KE L+ ++ A + F R+ +G G FG V +K T ++ LD +
Sbjct: 20 LAKAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQK 79
Query: 101 EPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYM 160
VV +K++ + L E + L V+ P LVKL S +D + +V EY+
Sbjct: 80 ---VVKLKQIEHT--------LNEKRILQAVNFPFLVKL--EFSFKDNSNL--YMVMEYV 124
Query: 161 PNRSLEDRLFSRAQPTLPWKTRL---EIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLD 217
P + L + + P R +I+L YLH + +IYRD K N+L+D
Sbjct: 125 PGGEMFSHLRRIGRFSEP-HARFYAAQIVLT----FEYLHS---LDLIYRDLKPENLLID 176
Query: 218 GNFKPKLSDFGLAR--EGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVL 275
+++DFG A+ +G T + GT Y APE I + D W+ GV++
Sbjct: 177 QQGYIQVTDFGFAKRVKGRTW-------XLCGTPEYLAPEIILSKGYNKAVDWWALGVLI 229
Query: 276 YEILTGRRVLERNRPT-MEQKLLEWVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLA 334
YE+ G ++P + +K++ +FP+ FS + LRN ++ +R L
Sbjct: 230 YEMAAGYPPFFADQPIQIYEKIVSGKVRFPS---HFSSDLKDLLRNLLQVDLTKRFGNLK 286
Query: 335 DNC 337
+
Sbjct: 287 NGV 289
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 134/303 (44%), Gaps = 49/303 (16%)
Query: 51 LYKEKEHHLRVFDMQELREA-TNGFNRMLKIGEGGFGSV----YKGT-----IRPLDGRG 100
L K KE L+ ++ A + F R+ +G G FG V +K T ++ LD +
Sbjct: 20 LAKAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQK 79
Query: 101 EPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYM 160
VV +K++ + L E + L V+ P LVKL S +D + +V EY
Sbjct: 80 ---VVKLKQIEHT--------LNEKRILQAVNFPFLVKL--EFSFKDNSNL--YMVMEYA 124
Query: 161 PNRSLEDRLFSRAQPTLPWKTRL---EIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLD 217
P + L + + P R +I+L YLH + +IYRD K N+++D
Sbjct: 125 PGGEMFSHLRRIGRFSEP-HARFYAAQIVLT----FEYLHS---LDLIYRDLKPENLMID 176
Query: 218 GNFKPKLSDFGLAR--EGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVL 275
K++DFG A+ +G T + GT Y APE I + D W+ GV++
Sbjct: 177 QQGYIKVTDFGFAKRVKGRT-------WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLI 229
Query: 276 YEILTGRRVLERNRPT-MEQKLLEWVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLA 334
YE+ G ++P + +K++ +FP+ FS + LRN ++ +R L
Sbjct: 230 YEMAAGYPPFFADQPIQIYEKIVSGKVRFPS---HFSSDLKDLLRNLLQVDLTKRFGNLK 286
Query: 335 DNC 337
+
Sbjct: 287 NGV 289
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 135/303 (44%), Gaps = 49/303 (16%)
Query: 51 LYKEKEHHLRVFDMQELREA-TNGFNRMLKIGEGGFGSV----YKGT-----IRPLDGRG 100
L K KE L+ ++ A + F R+ +G G FG V +K T ++ LD +
Sbjct: 20 LAKAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQK 79
Query: 101 EPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYM 160
VV +K++ + L E + L V+ P LVKL S +D + +V EY+
Sbjct: 80 ---VVKLKQIEHT--------LNEKRILQAVNFPFLVKL--EFSFKDNSNL--YMVMEYV 124
Query: 161 PNRSLEDRLFSRAQPTLPWKTRL---EIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLD 217
P + L + + P R +I+L YLH + +IYRD K N+L+D
Sbjct: 125 PGGEMFSHLRRIGRFSEP-HARFYAAQIVLT----FEYLHS---LDLIYRDLKPENLLID 176
Query: 218 GNFKPKLSDFGLAR--EGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVL 275
+++DFG A+ +G T + GT Y APE I + D W+ GV++
Sbjct: 177 QQGYIQVTDFGFAKRVKGRTW-------XLCGTPEYLAPEIILSKGYNKAVDWWALGVLI 229
Query: 276 YEILTGRRVLERNRPT-MEQKLLEWVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLA 334
YE+ G ++P + +K++ +FP+ FS + LRN ++ +R L
Sbjct: 230 YEMAAGYPPFFADQPIQIYEKIVSGKVRFPS---HFSSDLKDLLRNLLQVDLTKRFGNLK 286
Query: 335 DNC 337
+
Sbjct: 287 NGV 289
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 135/303 (44%), Gaps = 49/303 (16%)
Query: 51 LYKEKEHHLRVFDMQELREA-TNGFNRMLKIGEGGFGSV----YKGT-----IRPLDGRG 100
L K KE L+ ++ A + F R+ +G G FG V +K T ++ LD +
Sbjct: 20 LAKAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQK 79
Query: 101 EPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYM 160
VV +K++ + L E + L V+ P LVKL S +D + +V EY+
Sbjct: 80 ---VVKLKQIEHT--------LNEKRILQAVNFPFLVKL--EFSFKDNSNL--YMVMEYV 124
Query: 161 PNRSLEDRLFSRAQPTLPWKTRL---EIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLD 217
P + L + + P R +I+L YLH + +IYRD K N+L+D
Sbjct: 125 PGGEMFSHLRRIGRFSEP-HARFYAAQIVLT----FEYLHS---LDLIYRDLKPENLLID 176
Query: 218 GNFKPKLSDFGLAR--EGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVL 275
+++DFG A+ +G T + GT Y APE I + D W+ GV++
Sbjct: 177 QQGYIQVTDFGFAKRVKGRTW-------XLCGTPEYLAPEIILSKGYNKAVDWWALGVLI 229
Query: 276 YEILTGRRVLERNRPT-MEQKLLEWVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLA 334
YE+ G ++P + +K++ +FP+ FS + LRN ++ +R L
Sbjct: 230 YEMAAGYPPFFADQPIQIYEKIVSGKVRFPS---HFSSDLKDLLRNLLQVDLTKRFGNLK 286
Query: 335 DNC 337
+
Sbjct: 287 NGV 289
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 97/234 (41%), Gaps = 46/234 (19%)
Query: 69 EATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNN--HGLQGHKQWLAEVQ 126
E + + +G G +GSV D + L VAVKKL+ + K+ E++
Sbjct: 19 EVPERYQNLSPVGSGAYGSVCAA----FDTKT-GLRVAVKKLSRPFQSIIHAKRTYRELR 73
Query: 127 FLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLED--------RLFSRAQPTLP 178
L + H N++ LL + P RSLE+ L +
Sbjct: 74 LLKHMKHENVIGLLDV----------------FTPARSLEEFNDVYLVTHLMGADLNNIV 117
Query: 179 WKTRLE------IILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLARE 232
+L +I GL Y+H +I+RD K SN+ ++ + + K+ DFGL R
Sbjct: 118 KSQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDSELKILDFGLCRH 174
Query: 233 GPTGDHTHVSTAVVGTYGYAAPE-YIETGHLKSQSDIWSFGVVLYEILTGRRVL 285
T D T V T Y APE + H DIWS G ++ E+LTGR +
Sbjct: 175 --TDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 125/279 (44%), Gaps = 48/279 (17%)
Query: 74 FNRMLKIGEGGFGSV----YKGT-----IRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAE 124
F R+ +G G FG V +K T ++ LD + VV +K++ + L E
Sbjct: 43 FERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQK---VVKLKQIEHT--------LNE 91
Query: 125 VQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRL- 183
+ L V+ P LVKL S +D + +V EY+P + L + + P R
Sbjct: 92 KRILQAVNFPFLVKL--EYSFKDNSNL--YMVMEYVPGGEMFSHLRRIGRFSEP-HARFY 146
Query: 184 --EIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAR--EGPTGDHT 239
+I+L YLH + +IYRD K N+L+D +++DFG A+ +G T
Sbjct: 147 AAQIVLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW--- 196
Query: 240 HVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPT-MEQKLLE 298
+ GT Y APE I + D W+ GV++YE+ G ++P + +K++
Sbjct: 197 ----XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 252
Query: 299 WVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNC 337
+FP+ FS + LRN ++ +R L +
Sbjct: 253 GKVRFPS---HFSSDLKDLLRNLLQVDLTKRFGNLKNGV 288
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 97/223 (43%), Gaps = 23/223 (10%)
Query: 105 VAVKKLNN-HGLQGH-KQWLAEVQFLGVVSHPNLVKLLGYCSTED--ERGIQRLLVYEYM 160
VAVKKL+ Q H K+ E+ L V+H N++ LL + + E LV E M
Sbjct: 50 VAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 109
Query: 161 PNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNF 220
+ L L + ++ G+ +LH +I+RD K SN+++ +
Sbjct: 110 -----DANLCQVIHMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDC 161
Query: 221 KPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILT 280
K+ DFGLAR T + T V T Y APE I K DIWS G ++ E++
Sbjct: 162 TLKILDFGLARTASTN---FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVK 218
Query: 281 GRRVLERNRPTMEQKLLEW---VKQFPADGKKFSMMIDPRLRN 320
G + + + +W ++Q +F + P +RN
Sbjct: 219 GSVIFQGT-----DHIDQWNKVIEQLGTPSAEFMAALQPTVRN 256
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 99/219 (45%), Gaps = 28/219 (12%)
Query: 76 RMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKL----------NNHGLQGHKQWLAEV 125
++ K+G G +G V + +G E + +KK N + + H++ E+
Sbjct: 40 KVRKLGSGAYGEVL--LCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEI 97
Query: 126 QFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEI 185
L + HPN++KL ED++ LV E+ L +++ +R + I
Sbjct: 98 SLLKSLDHPNIIKLFD--VFEDKKYF--YLVTEFYEGGELFEQIINRHK--FDECDAANI 151
Query: 186 ILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGN---FKPKLSDFGLAREGPTGDHTHVS 242
+ G+ YLH+ +++RD K N+LL+ K+ DFGL+ +
Sbjct: 152 MKQILSGICYLHKH---NIVHRDIKPENILLENKNSLLNIKIVDFGLS---SFFSKDYKL 205
Query: 243 TAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTG 281
+GT Y APE ++ + + D+WS GV++Y +L G
Sbjct: 206 RDRLGTAYYIAPEVLKKKY-NEKCDVWSCGVIMYILLCG 243
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 96/235 (40%), Gaps = 48/235 (20%)
Query: 69 EATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNN--HGLQGHKQWLAEVQ 126
E + + +G G +GSV R VAVKKL+ + K+ E++
Sbjct: 19 EVPERYQNLSPVGSGAYGSVCAAFDTKTGHR-----VAVKKLSRPFQSIIHAKRTYRELR 73
Query: 127 FLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLED--------RLFSRAQPTLP 178
L + H N++ LL + P RSLE+ L +
Sbjct: 74 LLKHMKHENVIGLLDV----------------FTPARSLEEFNDVYLVTHLMGADLNNIV 117
Query: 179 WKTRLE------IILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLARE 232
+L +I GL Y+H +I+RD K SN+ ++ + + K+ DFGLAR
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR- 173
Query: 233 GPTGDHTHVSTA-VVGTYGYAAPE-YIETGHLKSQSDIWSFGVVLYEILTGRRVL 285
HT A V T Y APE + H DIWS G ++ E+LTGR +
Sbjct: 174 -----HTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 96/235 (40%), Gaps = 48/235 (20%)
Query: 69 EATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNN--HGLQGHKQWLAEVQ 126
E + + +G G +GSV R VAVKKL+ + K+ E++
Sbjct: 19 EVPERYQNLSPVGSGAYGSVCAAFDTKTGHR-----VAVKKLSRPFQSIIHAKRTYRELR 73
Query: 127 FLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLED--------RLFSRAQPTLP 178
L + H N++ LL + P RSLE+ L +
Sbjct: 74 LLKHMKHENVIGLLDV----------------FTPARSLEEFNDVYLVTHLMGADLNNIV 117
Query: 179 WKTRLE------IILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLARE 232
+L +I GL Y+H +I+RD K SN+ ++ + + K+ DFGLAR
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR- 173
Query: 233 GPTGDHTHVSTA-VVGTYGYAAPE-YIETGHLKSQSDIWSFGVVLYEILTGRRVL 285
HT A V T Y APE + H DIWS G ++ E+LTGR +
Sbjct: 174 -----HTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 108/248 (43%), Gaps = 28/248 (11%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNN-HGLQGH-KQWLAEVQFLGVVSHPNLV 137
IG G G V LD VA+KKL+ Q H K+ E+ + V+H N++
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN-----VAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNII 86
Query: 138 KLLGYCSTED--ERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAY 195
LL + + E LV E M + L Q L + ++ G+ +
Sbjct: 87 SLLNVFTPQKTLEEFQDVYLVMELM-----DANLCQVIQMELDHERMSYLLYQMLCGIKH 141
Query: 196 LHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPE 255
LH +I+RD K SN+++ + K+ DFGLAR T + + T V T Y APE
Sbjct: 142 LHSA---GIIHRDLKPSNIVVKSDXTLKILDFGLARTAGT---SFMMTPYVVTRYYRAPE 195
Query: 256 YIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEW---VKQFPADGKKFSM 312
I K DIWS G ++ E++ ++L R ++Q W ++Q +F
Sbjct: 196 VILGMGYKENVDIWSVGCIMGEMVR-HKILFPGRDYIDQ----WNKVIEQLGTPCPEFMK 250
Query: 313 MIDPRLRN 320
+ P +RN
Sbjct: 251 KLQPTVRN 258
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 95/218 (43%), Gaps = 25/218 (11%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLN--NHGLQGHKQWLAEVQFLGVVSHPNLV 137
+GEG +G V T +P GE +VA+KK+ + L + L E++ L H N++
Sbjct: 19 LGEGAYGVVCSATHKP---TGE--IVAIKKIEPFDKPLFALRT-LREIKILKHFKHENII 72
Query: 138 KLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLH 197
+ + + + + + L R+ S L I + LH
Sbjct: 73 TIFNIQRPDSFENFNEVYIIQELMQTDLH-RVISTQM--LSDDHIQYFIYQTLRAVKVLH 129
Query: 198 EGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAR---------EGPTGDHTHVSTAVVGT 248
VI+RD K SN+L++ N K+ DFGLAR PTG + + T V T
Sbjct: 130 GS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGM-TEXVAT 185
Query: 249 YGYAAPEYIETGHLKSQS-DIWSFGVVLYEILTGRRVL 285
Y APE + T S++ D+WS G +L E+ R +
Sbjct: 186 RWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIF 223
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 95/218 (43%), Gaps = 25/218 (11%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLN--NHGLQGHKQWLAEVQFLGVVSHPNLV 137
+GEG +G V T +P GE +VA+KK+ + L + L E++ L H N++
Sbjct: 19 LGEGAYGVVCSATHKP---TGE--IVAIKKIEPFDKPLFALRT-LREIKILKHFKHENII 72
Query: 138 KLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLH 197
+ + + + + + L R+ S L I + LH
Sbjct: 73 TIFNIQRPDSFENFNEVYIIQELMQTDLH-RVISTQM--LSDDHIQYFIYQTLRAVKVLH 129
Query: 198 EGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAR---------EGPTGDHTHVSTAVVGT 248
VI+RD K SN+L++ N K+ DFGLAR PTG + + T V T
Sbjct: 130 GS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGM-TEYVAT 185
Query: 249 YGYAAPEYIETGHLKSQS-DIWSFGVVLYEILTGRRVL 285
Y APE + T S++ D+WS G +L E+ R +
Sbjct: 186 RWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIF 223
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 118/270 (43%), Gaps = 30/270 (11%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSH 133
F R+ +G G FG V ++ ++ + + K L+ + L E + L V+
Sbjct: 44 FERIKTLGTGSFGRVM--LVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 134 PNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRL---EIILGAA 190
P L KL S +D + +V EY P + L + + P R +I+L
Sbjct: 102 PFLTKL--EFSFKDNSNL--YMVMEYAPGGEMFSHLRRIGRFSEP-HARFYAAQIVLT-- 154
Query: 191 EGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAR--EGPTGDHTHVSTAVVGT 248
YLH + +IYRD K N+++D K++DFG A+ +G T + GT
Sbjct: 155 --FEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTW-------XLCGT 202
Query: 249 YGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPT-MEQKLLEWVKQFPADG 307
Y APE I + D W+ GV++YE+ G ++P + +K++ +FP+
Sbjct: 203 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS-- 260
Query: 308 KKFSMMIDPRLRNQYSINAARRVAKLADNC 337
FS + LRN ++ +R L +
Sbjct: 261 -HFSSDLKDLLRNLLQVDLTKRFGNLKNGV 289
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 118/270 (43%), Gaps = 30/270 (11%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSH 133
F R+ +G G FG V ++ ++ + + K L+ + L E + L V+
Sbjct: 44 FERIKTLGTGSFGRVM--LVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 134 PNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRL---EIILGAA 190
P L KL S +D + +V EY P + L + + P R +I+L
Sbjct: 102 PFLTKL--EFSFKDNSNL--YMVMEYAPGGEMFSHLRRIGRFSEP-HARFYAAQIVLT-- 154
Query: 191 EGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAR--EGPTGDHTHVSTAVVGT 248
YLH + +IYRD K N+++D K++DFG A+ +G T + GT
Sbjct: 155 --FEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTW-------XLCGT 202
Query: 249 YGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPT-MEQKLLEWVKQFPADG 307
Y APE I + D W+ GV++YE+ G ++P + +K++ +FP+
Sbjct: 203 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS-- 260
Query: 308 KKFSMMIDPRLRNQYSINAARRVAKLADNC 337
FS + LRN ++ +R L +
Sbjct: 261 -HFSSDLKDLLRNLLQVDLTKRFGNLKNGV 289
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 108/248 (43%), Gaps = 28/248 (11%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNN-HGLQGH-KQWLAEVQFLGVVSHPNLV 137
IG G G V LD VA+KKL+ Q H K+ E+ + V+H N++
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN-----VAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNII 86
Query: 138 KLLGYCSTED--ERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAY 195
LL + + E LV E M + L Q L + ++ G+ +
Sbjct: 87 SLLNVFTPQKTLEEFQDVYLVMELM-----DANLXQVIQMELDHERMSYLLYQMLCGIKH 141
Query: 196 LHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPE 255
LH +I+RD K SN+++ + K+ DFGLAR T + + T V T Y APE
Sbjct: 142 LHSA---GIIHRDLKPSNIVVKSDXTLKILDFGLARTAGT---SFMMTPYVVTRYYRAPE 195
Query: 256 YIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEW---VKQFPADGKKFSM 312
I K DIWS G ++ E++ ++L R ++Q W ++Q +F
Sbjct: 196 VILGMGYKENVDIWSVGCIMGEMVR-HKILFPGRDYIDQ----WNKVIEQLGTPCPEFMK 250
Query: 313 MIDPRLRN 320
+ P +RN
Sbjct: 251 KLQPTVRN 258
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 130/297 (43%), Gaps = 39/297 (13%)
Query: 65 QELREATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG-LQGHKQWLA 123
Q + N + ++G G G V+K R V+AVK++ G + +K+ L
Sbjct: 18 QRYQAEINDLENLGEMGSGTCGQVWKMRFRKTGH-----VIAVKQMRRSGNKEENKRILM 72
Query: 124 EVQFLGVVSH--PNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKT 181
++ + + SH P +V+ G T + I L+ + ++L R Q +P +
Sbjct: 73 DLDVV-LKSHDCPYIVQCFGTFITNTDVFIAMELM------GTCAEKLKKRMQGPIPERI 125
Query: 182 RLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHV 241
++ + + L YL E + VI+RD K SN+LLD + KL DFG++ D
Sbjct: 126 LGKMTVAIVKALYYLKE--KHGVIHRDVKPSNILLDERGQIKLCDFGISGR-LVDDKAKD 182
Query: 242 STAVVGTYGYAAPEYIE-----TGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKL 296
+A G Y APE I+ ++D+WS G+ L E+ TG+ +N T + L
Sbjct: 183 RSA--GCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQ-FPYKNCKTDFEVL 239
Query: 297 LEWVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVE 353
+ +++ P P L + +CL K+ +RP N+++E
Sbjct: 240 TKVLQEEP-----------PLLPGHMGFSGD--FQSFVKDCLTKDHRKRPKYNKLLE 283
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 86/181 (47%), Gaps = 15/181 (8%)
Query: 105 VAVKKLNN-HGLQGH-KQWLAEVQFLGVVSHPNLVKLLGYCSTED--ERGIQRLLVYEYM 160
VA+KKL+ Q H K+ E+ + VV+H N++ LL + + E +V E M
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 161 PNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNF 220
+ L Q L + ++ G+ +LH +I+RD K SN+++ +
Sbjct: 112 -----DANLSQVIQMELDHERMSYLLYQMLVGIKHLHSA---GIIHRDLKPSNIVVKSDA 163
Query: 221 KPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILT 280
K+ DFGLAR T + + T V T Y APE I K DIWS GV++ E++
Sbjct: 164 TLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIK 220
Query: 281 G 281
G
Sbjct: 221 G 221
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 134/301 (44%), Gaps = 49/301 (16%)
Query: 51 LYKEKEHHLRVFDMQELREA-TNGFNRMLKIGEGGFGSV----YKGT-----IRPLDGRG 100
L K KE L+ ++ A + F R+ +G G FG V +K T ++ LD +
Sbjct: 12 LAKAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQK 71
Query: 101 EPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYM 160
VV +K++ + L E + L V+ P LVKL S +D + +V EY+
Sbjct: 72 ---VVKLKQIEHT--------LNEKRILQAVNFPFLVKL--EFSFKDNSNL--YMVMEYV 116
Query: 161 PNRSLEDRLFSRAQPTLPWKTRL---EIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLD 217
P + L + P R +I+L YLH + +IYRD K N+L+D
Sbjct: 117 PGGEMFSHLRRIGRFXEP-HARFYAAQIVLT----FEYLHS---LDLIYRDLKPENLLID 168
Query: 218 GNFKPKLSDFGLAR--EGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVL 275
+++DFG A+ +G T + GT Y APE I + D W+ GV++
Sbjct: 169 QQGYIQVTDFGFAKRVKGRTW-------XLCGTPEYLAPEIILSKGYNKAVDWWALGVLI 221
Query: 276 YEILTGRRVLERNRPT-MEQKLLEWVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLA 334
YE+ G ++P + +K++ +FP+ FS + LRN ++ +R L
Sbjct: 222 YEMAAGYPPFFADQPIQIYEKIVSGKVRFPS---HFSSDLKDLLRNLLQVDLTKRFGNLK 278
Query: 335 D 335
+
Sbjct: 279 N 279
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 101/228 (44%), Gaps = 28/228 (12%)
Query: 62 FDMQELREATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQW 121
F M + ++ ++ ++G+G F V + + ++ KKL+ Q ++
Sbjct: 19 FMMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLER- 77
Query: 122 LAEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSL-ED----RLFSRAQPT 176
E + + HPN+V+L + S ++E LV++ + L ED +S A +
Sbjct: 78 --EARICRKLQHPNIVRL--HDSIQEESF--HYLVFDLVTGGELFEDIVAREFYSEADAS 131
Query: 177 LPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKP---KLSDFGLAREG 233
I E +AY H +++R+ K N+LL K KL+DFGLA E
Sbjct: 132 -------HCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEV 181
Query: 234 PTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTG 281
+ H GT GY +PE ++ DIW+ GV+LY +L G
Sbjct: 182 NDSEAWH---GFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 226
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 101/228 (44%), Gaps = 29/228 (12%)
Query: 64 MQELREATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQ--- 120
+++LR + + IG G FG V +R R V A+K L+ +
Sbjct: 61 IRDLRMKAEDYEVVKVIGRGAFGEV--QLVRHKSTRK---VYAMKLLSKFEMIKRSDSAF 115
Query: 121 WLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQP---TL 177
+ E + + P +V+L + + +D+R + +V EYMP L + + + P
Sbjct: 116 FWEERDIMAFANSPWVVQL--FYAFQDDRYL--YMVMEYMPGGDLVNLMSNYDVPEKWAR 171
Query: 178 PWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGD 237
+ + + L A + ++H RD K N+LLD + KL+DFG +
Sbjct: 172 FYTAEVVLALDAIHSMGFIH---------RDVKPDNMLLDKSGHLKLADFGTCMKMNKEG 222
Query: 238 HTHVSTAVVGTYGYAAPEYIET----GHLKSQSDIWSFGVVLYEILTG 281
TA VGT Y +PE +++ G+ + D WS GV LYE+L G
Sbjct: 223 MVRCDTA-VGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 269
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 86/181 (47%), Gaps = 15/181 (8%)
Query: 105 VAVKKLNN-HGLQGH-KQWLAEVQFLGVVSHPNLVKLLGYCSTED--ERGIQRLLVYEYM 160
VA+KKL+ Q H K+ E+ + VV+H N++ LL + + E +V E M
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 161 PNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNF 220
+ L Q L + ++ G+ +LH +I+RD K SN+++ +
Sbjct: 112 -----DANLSQVIQMELDHERMSYLLYQMLVGIKHLHSA---GIIHRDLKPSNIVVKSDA 163
Query: 221 KPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILT 280
K+ DFGLAR T + + T V T Y APE I K DIWS GV++ E++
Sbjct: 164 TLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIK 220
Query: 281 G 281
G
Sbjct: 221 G 221
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 82/207 (39%), Gaps = 29/207 (14%)
Query: 154 LLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSN 213
L+V E + L R+ R + EI+ E + YLH I + +RD K N
Sbjct: 89 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPEN 145
Query: 214 VLLDG---NFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWS 270
+L N KL+DFG A+E T H ++ Y Y APE + D+WS
Sbjct: 146 LLYTSKRPNAILKLTDFGFAKE--TTSHNSLTEPCYTPY-YVAPEVLGPEKYDKSCDMWS 202
Query: 271 FGVVLYEILTGRRVLERNR-----PTMEQKLLEWVKQFPADGKKFSMMIDPRLRNQYSIN 325
GV++Y +L G N P M+ ++ +FP N
Sbjct: 203 LGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFP---------------NPEWSE 247
Query: 326 AARRVAKLADNCLKKNPEERPTMNQVV 352
+ V L N LK P +R T+ + +
Sbjct: 248 VSEEVKMLIRNLLKTEPTQRMTITEFM 274
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 101/226 (44%), Gaps = 27/226 (11%)
Query: 58 HLRVFDMQELREATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQG 117
H V D ++ E ++G G FG V++ T R A K +
Sbjct: 46 HDHVLDHYDIHE---------ELGTGAFGVVHRVTERATGNN-----FAAKFVMTPHESD 91
Query: 118 HKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTL 177
+ E+Q + V+ HP LV L + + ED+ + +++YE+M L +++ + +
Sbjct: 92 KETVRKEIQTMSVLRHPTLVNL--HDAFEDDN--EMVMIYEFMSGGELFEKV-ADEHNKM 146
Query: 178 PWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDG--NFKPKLSDFGLAREGPT 235
+E + +GL ++HE ++ D K N++ + + KL DFGL
Sbjct: 147 SEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDP 203
Query: 236 GDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTG 281
V+T GT +AAPE E + +D+WS GV+ Y +L+G
Sbjct: 204 KQSVKVTT---GTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSG 246
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 97/234 (41%), Gaps = 46/234 (19%)
Query: 69 EATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNN--HGLQGHKQWLAEVQ 126
E + + +G G +GSV D + L VAVKKL+ + K+ E++
Sbjct: 42 EVPERYQNLSPVGSGAYGSVCAA----FDTKT-GLRVAVKKLSRPFQSIIHAKRTYRELR 96
Query: 127 FLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLED--------RLFSRAQPTLP 178
L + H N++ LL + P RSLE+ L +
Sbjct: 97 LLKHMKHENVIGLLDV----------------FTPARSLEEFNDVYLVTHLMGADLNNIV 140
Query: 179 WKTRLE------IILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLARE 232
+L +I GL Y+H +I+RD K SN+ ++ + + K+ DFGLAR
Sbjct: 141 KCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 197
Query: 233 GPTGDHTHVSTAVVGTYGYAAPE-YIETGHLKSQSDIWSFGVVLYEILTGRRVL 285
T D V T Y APE + H DIWS G ++ E+LTGR +
Sbjct: 198 --TDDEM---XGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 246
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 101/228 (44%), Gaps = 29/228 (12%)
Query: 64 MQELREATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQ--- 120
+++LR + + IG G FG V +R R V A+K L+ +
Sbjct: 66 IRDLRMKAEDYEVVKVIGRGAFGEV--QLVRHKSTRK---VYAMKLLSKFEMIKRSDSAF 120
Query: 121 WLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQP---TL 177
+ E + + P +V+L + + +D+R + +V EYMP L + + + P
Sbjct: 121 FWEERDIMAFANSPWVVQL--FYAFQDDRYL--YMVMEYMPGGDLVNLMSNYDVPEKWAR 176
Query: 178 PWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGD 237
+ + + L A + ++H RD K N+LLD + KL+DFG +
Sbjct: 177 FYTAEVVLALDAIHSMGFIH---------RDVKPDNMLLDKSGHLKLADFGTCMKMNKEG 227
Query: 238 HTHVSTAVVGTYGYAAPEYIET----GHLKSQSDIWSFGVVLYEILTG 281
TA VGT Y +PE +++ G+ + D WS GV LYE+L G
Sbjct: 228 MVRCDTA-VGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 96/235 (40%), Gaps = 48/235 (20%)
Query: 69 EATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNN--HGLQGHKQWLAEVQ 126
E + + +G G +GSV R VAVKKL+ + K+ E++
Sbjct: 15 EVPERYQNLSPVGSGAYGSVCAAFDTKTGHR-----VAVKKLSRPFQSIIHAKRTYRELR 69
Query: 127 FLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLED--------RLFSRAQPTLP 178
L + H N++ LL + P RSLE+ L +
Sbjct: 70 LLKHMKHENVIGLLDV----------------FTPARSLEEFNDVYLVTHLMGADLNNIV 113
Query: 179 WKTRLE------IILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLARE 232
+L +I GL Y+H +I+RD K SN+ ++ + + K+ DFGLAR
Sbjct: 114 KCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR- 169
Query: 233 GPTGDHTHVSTA-VVGTYGYAAPE-YIETGHLKSQSDIWSFGVVLYEILTGRRVL 285
HT A V T Y APE + H DIWS G ++ E+LTGR +
Sbjct: 170 -----HTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 219
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 117/270 (43%), Gaps = 30/270 (11%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSH 133
F R+ +G G FG V ++ ++ + + K L+ + L E + L V+
Sbjct: 44 FERIKTLGTGSFGRVM--LVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 134 PNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRL---EIILGAA 190
P L KL S +D + +V EY P + L + P R +I+L
Sbjct: 102 PFLTKL--EFSFKDNSNL--YMVMEYAPGGEMFSHLRRIGRFXEP-HARFYAAQIVLT-- 154
Query: 191 EGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAR--EGPTGDHTHVSTAVVGT 248
YLH + +IYRD K N+++D K++DFG A+ +G T + GT
Sbjct: 155 --FEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTW-------XLCGT 202
Query: 249 YGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPT-MEQKLLEWVKQFPADG 307
Y APE I + D W+ GV++YE+ G ++P + +K++ +FP+
Sbjct: 203 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS-- 260
Query: 308 KKFSMMIDPRLRNQYSINAARRVAKLADNC 337
FS + LRN ++ +R L +
Sbjct: 261 -HFSSDLKDLLRNLLQVDLTKRFGNLKNGV 289
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 101/228 (44%), Gaps = 29/228 (12%)
Query: 64 MQELREATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQ--- 120
+++LR + + IG G FG V +R R V A+K L+ +
Sbjct: 66 IRDLRMKAEDYEVVKVIGRGAFGEV--QLVRHKSTRK---VYAMKLLSKFEMIKRSDSAF 120
Query: 121 WLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQP---TL 177
+ E + + P +V+L + + +D+R + +V EYMP L + + + P
Sbjct: 121 FWEERDIMAFANSPWVVQL--FYAFQDDRYL--YMVMEYMPGGDLVNLMSNYDVPEKWAR 176
Query: 178 PWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGD 237
+ + + L A + ++H RD K N+LLD + KL+DFG +
Sbjct: 177 FYTAEVVLALDAIHSMGFIH---------RDVKPDNMLLDKSGHLKLADFGTCMKMNKEG 227
Query: 238 HTHVSTAVVGTYGYAAPEYIET----GHLKSQSDIWSFGVVLYEILTG 281
TA VGT Y +PE +++ G+ + D WS GV LYE+L G
Sbjct: 228 MVRCDTA-VGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 129/296 (43%), Gaps = 43/296 (14%)
Query: 51 LYKEKEHHLRVFDMQELREAT-NGFNRMLKIGEGGFGSVY------KGTIRPLDGRGEPL 103
L K KE L+ ++ A + F+R+ +G G FG V G + +
Sbjct: 19 LAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQK 78
Query: 104 VVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNR 163
VV +K++ + L E + L V+ P LVKL S +D + +V EY+
Sbjct: 79 VVKLKQIEHT--------LNEKRILQAVNFPFLVKL--EFSFKDNSNL--YMVMEYVAGG 126
Query: 164 SLEDRLFSRAQPTLPWKTRL---EIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNF 220
+ L + + P R +I+L YLH + +IYRD K N+L+D
Sbjct: 127 EMFSHLRRIGRFSEP-HARFYAAQIVLT----FEYLHS---LDLIYRDLKPENLLIDQQG 178
Query: 221 KPKLSDFGLAR--EGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEI 278
+++DFG A+ +G T + GT Y APE I + D W+ GV++YE+
Sbjct: 179 YIQVTDFGFAKRVKGRTW-------XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Query: 279 LTGRRVLERNRPT-MEQKLLEWVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKL 333
G ++P + +K++ +FP+ FS + LRN ++ +R L
Sbjct: 232 AAGYPPFFADQPIQIYEKIVSGKVRFPS---HFSSDLKDLLRNLLQVDLTKRFGNL 284
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 95/234 (40%), Gaps = 46/234 (19%)
Query: 69 EATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNN--HGLQGHKQWLAEVQ 126
E + + +G G +GSV R VAVKKL+ + K+ E++
Sbjct: 39 EVPERYQNLSPVGSGAYGSVCAAFDTKTGHR-----VAVKKLSRPFQSIIHAKRTYRELR 93
Query: 127 FLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLED--------RLFSRAQPTLP 178
L + H N++ LL + P RSLE+ L +
Sbjct: 94 LLKHMKHENVIGLLDV----------------FTPARSLEEFNDVYLVTHLMGADLNNIV 137
Query: 179 WKTRLE------IILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLARE 232
+L +I GL Y+H +I+RD K SN+ ++ + + K+ DFGLAR
Sbjct: 138 KCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 194
Query: 233 GPTGDHTHVSTAVVGTYGYAAPE-YIETGHLKSQSDIWSFGVVLYEILTGRRVL 285
T D V T Y APE + H DIWS G ++ E+LTGR +
Sbjct: 195 --TDDEM---XGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 243
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 118/276 (42%), Gaps = 39/276 (14%)
Query: 58 HLRVFDMQELREATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQG 117
H V D ++ E ++G G FG V++ T R A K +
Sbjct: 152 HDHVLDHYDIHE---------ELGTGAFGVVHRVTERATGNN-----FAAKFVMTPHESD 197
Query: 118 HKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTL 177
+ E+Q + V+ HP LV L + + ED+ + +++YE+M L +++ + +
Sbjct: 198 KETVRKEIQTMSVLRHPTLVNL--HDAFEDDN--EMVMIYEFMSGGELFEKV-ADEHNKM 252
Query: 178 PWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDG--NFKPKLSDFGLAREGPT 235
+E + +GL ++HE ++ D K N++ + + KL DFGL
Sbjct: 253 SEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDP 309
Query: 236 GDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVL--ERNRPTME 293
V+T GT +AAPE E + +D+WS GV+ Y +L+G E + T+
Sbjct: 310 KQSVKVTT---GTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLR 366
Query: 294 Q-KLLEWVKQFPA------DGKKFS---MMIDPRLR 319
K +W A DGK F ++ DP R
Sbjct: 367 NVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTR 402
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 130/300 (43%), Gaps = 43/300 (14%)
Query: 51 LYKEKEHHLRVFDMQELREAT-NGFNRMLKIGEGGFGSVY------KGTIRPLDGRGEPL 103
L K KE L+ ++ A + F+R+ +G G FG V G + +
Sbjct: 19 LAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQK 78
Query: 104 VVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNR 163
VV +K++ + L E + L V+ P LVKL S +D + +V EY+
Sbjct: 79 VVKLKQIEHT--------LNEKRILQAVNFPFLVKL--EFSFKDNSNL--YMVMEYVAGG 126
Query: 164 SLEDRLFSRAQPTLPWKTRL---EIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNF 220
+ L + + P R +I+L YLH + +IYRD K N+L+D
Sbjct: 127 EMFSHLRRIGRFSEP-HARFYAAQIVLT----FEYLHS---LDLIYRDLKPENLLIDQQG 178
Query: 221 KPKLSDFGLAR--EGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEI 278
+++DFG A+ +G T + GT Y APE I + D W+ GV++YE+
Sbjct: 179 YIQVTDFGFAKRVKGRTW-------XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Query: 279 LTGRRVLERNRPT-MEQKLLEWVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNC 337
G ++P + +K++ +FP+ FS + LRN ++ +R L +
Sbjct: 232 AAGYPPFFADQPIQIYEKIVSGKVRFPS---HFSSDLKDLLRNLLQVDLTKRFGNLKNGV 288
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 77/162 (47%), Gaps = 16/162 (9%)
Query: 124 EVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRL 183
EV L + HPN++ L E +L+ E + L D F + +L +
Sbjct: 64 EVSILKEIQHPNVITLHEVY----ENKTDVILILELVAGGELFD--FLAEKESLTEEEAT 117
Query: 184 EIILGAAEGLAYLHEGLEIQVIYRDFKTSNV-LLDGNF-KP--KLSDFGLAREGPTGDHT 239
E + G+ YLH +Q+ + D K N+ LLD N KP K+ DFGLA + G+
Sbjct: 118 EFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF 174
Query: 240 HVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTG 281
+ GT + APE + L ++D+WS GV+ Y +L+G
Sbjct: 175 K---NIFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 131/300 (43%), Gaps = 43/300 (14%)
Query: 51 LYKEKEHHLRVFDMQELREAT-NGFNRMLKIGEGGFGSVY------KGTIRPLDGRGEPL 103
L K KE L+ ++ A + F+R+ +G G FG V G + +
Sbjct: 19 LAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQK 78
Query: 104 VVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNR 163
VV +K++ + L E + L V+ P LVKL S +D + +V EY+
Sbjct: 79 VVKLKQIEHT--------LNEKRILQAVNFPFLVKL--EFSFKDNSNL--YMVMEYVAGG 126
Query: 164 SLED---RLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNF 220
+ R+ A+P + +I+L YLH + +IYRD K N+L+D
Sbjct: 127 EMFSHLRRIGRFAEPHARFYAA-QIVLT----FEYLHS---LDLIYRDLKPENLLIDQQG 178
Query: 221 KPKLSDFGLAR--EGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEI 278
+++DFG A+ +G T + GT Y APE I + D W+ GV++YE+
Sbjct: 179 YIQVTDFGFAKRVKGRTW-------XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Query: 279 LTGRRVLERNRPT-MEQKLLEWVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNC 337
G ++P + +K++ +FP+ FS + LRN ++ +R L +
Sbjct: 232 AAGYPPFFADQPIQIYEKIVSGKVRFPS---HFSSDLKDLLRNLLQVDLTKRFGNLKNGV 288
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 75/158 (47%), Gaps = 24/158 (15%)
Query: 133 HPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRL-----FSRAQPTLPWKTRLEIIL 187
HPN+VKL + + LV E + L +R+ FS + + I+
Sbjct: 65 HPNIVKLHEVFHDQ----LHTFLVMELLNGGELFERIKKKKHFSETEASY-------IMR 113
Query: 188 GAAEGLAYLHEGLEIQVIYRDFKTSNVLL---DGNFKPKLSDFGLAREGPTGDHTHVSTA 244
++++H+ + V++RD K N+L + N + K+ DFG AR P D+ + T
Sbjct: 114 KLVSAVSHMHD---VGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPP-DNQPLKTP 169
Query: 245 VVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGR 282
T YAAPE + D+WS GV+LY +L+G+
Sbjct: 170 CF-TLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQ 206
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 121/301 (40%), Gaps = 50/301 (16%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSH 133
F + IG GGFG V+K R +DG+ V+ K NN + + LA++ + +V +
Sbjct: 14 FKEIELIGSGGFGQVFKAKHR-IDGK--TYVIRRVKYNNEKAEREVKALAKLDHVNIVHY 70
Query: 134 PNLVKLLGYCSTEDERGIQR-------------------LLVYEYMPNRSLEDRLFSRAQ 174
Y + ++ + E+ +LE + R
Sbjct: 71 NGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRG 130
Query: 175 PTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGP 234
L LE+ +G+ Y+H ++I+RD K SN+ L + K+ DFGL
Sbjct: 131 EKLDKVLALELFEQITKGVDYIHSK---KLIHRDLKPSNIFLVDTKQVKIGDFGLV---T 184
Query: 235 TGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQ 294
+ + T GT Y +PE I + + D+++ G++L E+L V + T
Sbjct: 185 SLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL---HVCDTAFET--- 238
Query: 295 KLLEWVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVES 354
K F+ + D + + + + KL L K PE+RP ++++ +
Sbjct: 239 ------------SKFFTDLRDGIISDIFDKKEKTLLQKL----LSKKPEDRPNTSEILRT 282
Query: 355 L 355
L
Sbjct: 283 L 283
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 89/208 (42%), Gaps = 25/208 (12%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLA-EVQFLGVVSHPNLVK 138
+G G F V + + + AVK + L+G + + E+ L + H N+V
Sbjct: 30 LGTGAFSEVVLA-----EEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVA 84
Query: 139 LLGYCSTED--ERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYL 196
L ED E LV + + L DR+ + T K +I + + YL
Sbjct: 85 L------EDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTE--KDASTLIRQVLDAVYYL 136
Query: 197 HEGLEIQVIYRDFKTSNVLL---DGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAA 253
H + +++RD K N+L D K +SDFGL++ GD V + GT GY A
Sbjct: 137 HR---MGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGD---VMSTACGTPGYVA 190
Query: 254 PEYIETGHLKSQSDIWSFGVVLYEILTG 281
PE + D WS GV+ Y +L G
Sbjct: 191 PEVLAQKPYSKAVDCWSIGVIAYILLCG 218
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 130/300 (43%), Gaps = 43/300 (14%)
Query: 51 LYKEKEHHLRVFDMQELREAT-NGFNRMLKIGEGGFGSVY------KGTIRPLDGRGEPL 103
L K KE L+ ++ A + F+R+ +G G FG V G + +
Sbjct: 20 LAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQK 79
Query: 104 VVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNR 163
VV +K++ + L E + L V+ P LVKL S +D + +V EY+
Sbjct: 80 VVKLKQIEHT--------LNEKRILQAVNFPFLVKL--EFSFKDNSNL--YMVMEYVAGG 127
Query: 164 SLEDRLFSRAQPTLPWKTRL---EIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNF 220
+ L + + P R +I+L YLH + +IYRD K N+L+D
Sbjct: 128 EMFSHLRRIGRFSEP-HARFYAAQIVLT----FEYLHS---LDLIYRDLKPENLLIDQQG 179
Query: 221 KPKLSDFGLAR--EGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEI 278
+++DFG A+ +G T + GT Y APE I + D W+ GV++YE+
Sbjct: 180 YIQVTDFGFAKRVKGRTW-------XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 232
Query: 279 LTGRRVLERNRPT-MEQKLLEWVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNC 337
G ++P + +K++ +FP+ FS + LRN ++ +R L +
Sbjct: 233 AAGYPPFFADQPIQIYEKIVSGKVRFPS---HFSSDLKDLLRNLLQVDLTKRFGNLKNGV 289
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 130/300 (43%), Gaps = 43/300 (14%)
Query: 51 LYKEKEHHLRVFDMQELREAT-NGFNRMLKIGEGGFGSVY------KGTIRPLDGRGEPL 103
L K KE L+ ++ A + F+R+ +G G FG V G + +
Sbjct: 19 LAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQK 78
Query: 104 VVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNR 163
VV +K++ + L E + L V+ P LVKL S +D + +V EY+
Sbjct: 79 VVKLKQIEHT--------LNEKRILQAVNFPFLVKL--EFSFKDNSNL--YMVMEYVAGG 126
Query: 164 SLEDRLFSRAQPTLPWKTRL---EIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNF 220
+ L + + P R +I+L YLH + +IYRD K N+L+D
Sbjct: 127 EMFSHLRRIGRFSEP-HARFYAAQIVLT----FEYLHS---LDLIYRDLKPENLLIDQQG 178
Query: 221 KPKLSDFGLAR--EGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEI 278
+++DFG A+ +G T + GT Y APE I + D W+ GV++YE+
Sbjct: 179 YIQVTDFGFAKRVKGRTW-------XLAGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Query: 279 LTGRRVLERNRPT-MEQKLLEWVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNC 337
G ++P + +K++ +FP+ FS + LRN ++ +R L +
Sbjct: 232 AAGYPPFFADQPIQIYEKIVSGKVRFPS---HFSSDLKDLLRNLLQVDLTKRFGNLKNGV 288
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 130/300 (43%), Gaps = 43/300 (14%)
Query: 51 LYKEKEHHLRVFDMQELREAT-NGFNRMLKIGEGGFGSVY------KGTIRPLDGRGEPL 103
L K KE L+ ++ A + F+R+ +G G FG V G + +
Sbjct: 19 LAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQK 78
Query: 104 VVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNR 163
VV +K++ + L E + L V+ P LVKL S +D + +V EY+
Sbjct: 79 VVKLKQIEHT--------LNEKRILQAVNFPFLVKL--EFSFKDNSNL--YMVMEYVAGG 126
Query: 164 SLEDRLFSRAQPTLPWKTRL---EIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNF 220
+ L + + P R +I+L YLH + +IYRD K N+L+D
Sbjct: 127 EMFSHLRRIGRFSEP-HARFYAAQIVLT----FEYLHS---LDLIYRDLKPENLLIDQQG 178
Query: 221 KPKLSDFGLAR--EGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEI 278
+++DFG A+ +G T + GT Y APE I + D W+ GV++YE+
Sbjct: 179 YIQVTDFGFAKRVKGRTW-------XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Query: 279 LTGRRVLERNRPT-MEQKLLEWVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNC 337
G ++P + +K++ +FP+ FS + LRN ++ +R L +
Sbjct: 232 AAGYPPFFADQPIQIYEKIVSGKVRFPS---HFSSDLKDLLRNLLQVDLTKRFGNLKNGV 288
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 75/165 (45%), Gaps = 26/165 (15%)
Query: 124 EVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSL---EDRLF---SRAQPTL 177
E+Q + + + + G + DE I +YEYM N S+ ++ F +
Sbjct: 93 ELQIITDIKNEYCLTCEGIITNYDEVYI----IYEYMENDSILKFDEYFFVLDKNYTCFI 148
Query: 178 PWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFG----LAREG 233
P + II +Y+H E + +RD K SN+L+D N + KLSDFG + +
Sbjct: 149 PIQVIKCIIKSVLNSFSYIHN--EKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKK 206
Query: 234 PTGDHTHVSTAVVGTYGYAAPEYI--ETGHLKSQSDIWSFGVVLY 276
G GTY + PE+ E+ + ++ DIWS G+ LY
Sbjct: 207 IKGSR--------GTYEFMPPEFFSNESSYNGAKVDIWSLGICLY 243
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 98/219 (44%), Gaps = 28/219 (12%)
Query: 71 TNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGV 130
++ ++ ++G+G F V + + ++ KKL+ Q ++ E +
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLER---EARICRK 61
Query: 131 VSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSL-ED----RLFSRAQPTLPWKTRLEI 185
+ HPN+V+L + S ++E LV++ + L ED +S A +
Sbjct: 62 LQHPNIVRL--HDSIQEESF--HYLVFDLVTGGELFEDIVAREFYSEADAS-------HC 110
Query: 186 ILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFK---PKLSDFGLAREGPTGDHTHVS 242
I E +AY H +++R+ K N+LL K KL+DFGLA E + H
Sbjct: 111 IQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH-- 165
Query: 243 TAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTG 281
GT GY +PE ++ DIW+ GV+LY +L G
Sbjct: 166 -GFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 133/303 (43%), Gaps = 49/303 (16%)
Query: 51 LYKEKEHHLRVFDMQELREA-TNGFNRMLKIGEGGFGSV----YKGT-----IRPLDGRG 100
L K KE L+ ++ A + F R+ +G G FG V +K T ++ LD +
Sbjct: 20 LAKAKEDFLKKWESPAQNTAHLDQFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQK 79
Query: 101 EPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYM 160
VV +K++ + L E + V+ P LVKL S +D + +V EY
Sbjct: 80 ---VVKLKQIEHT--------LNEKRIQQAVNFPFLVKL--EFSFKDNSNL--YMVLEYA 124
Query: 161 PNRSLEDRLFSRAQPTLPWKTRL---EIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLD 217
P + L + + P R +I+L YLH + +IYRD K N+L+D
Sbjct: 125 PGGEMFSHLRRIGRFSEP-HARFYAAQIVLT----FEYLHS---LDLIYRDLKPENLLID 176
Query: 218 GNFKPKLSDFGLAR--EGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVL 275
K++DFG A+ +G T + GT Y APE I + D W+ GV++
Sbjct: 177 QQGYIKVADFGFAKRVKGRT-------WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLI 229
Query: 276 YEILTGRRVLERNRPT-MEQKLLEWVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLA 334
YE+ G ++P + +K++ +FP+ FS + LRN ++ +R L
Sbjct: 230 YEMAAGYPPFFADQPIQIYEKIVSGKVRFPS---HFSSDLKDLLRNLLQVDLTKRFGNLK 286
Query: 335 DNC 337
+
Sbjct: 287 NGV 289
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 95/234 (40%), Gaps = 28/234 (11%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSH 133
F M +G G F V+ R L G+ + A+K + E+ L + H
Sbjct: 11 FIFMEVLGSGAFSEVFLVKQR-LTGK----LFALKCIKKSPAFRDSSLENEIAVLKKIKH 65
Query: 134 PNLVKLLGYCSTED--ERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAE 191
N+V L ED E LV + + L DR+ R T K +I
Sbjct: 66 ENIVTL------EDIYESTTHYYLVMQLVSGGELFDRILERGVYTE--KDASLVIQQVLS 117
Query: 192 GLAYLHEGLEIQVIYRDFKTSNVLL---DGNFKPKLSDFGLAREGPTGDHTHVSTAVVGT 248
+ YLHE +++RD K N+L + N K ++DFGL++ G + + GT
Sbjct: 118 AVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG----IMSTACGT 170
Query: 249 YGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQ 302
GY APE + D WS GV+ Y +L G E KL E +K+
Sbjct: 171 PGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEET---ESKLFEKIKE 221
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 97/234 (41%), Gaps = 46/234 (19%)
Query: 69 EATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNN--HGLQGHKQWLAEVQ 126
E + + +G G +GSV D + L VAVKKL+ + K+ E++
Sbjct: 19 EVPERYQNLSPVGSGAYGSVCAA----FDTKT-GLRVAVKKLSRPFQSIIHAKRTYRELR 73
Query: 127 FLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLED--------RLFSRAQPTLP 178
L + H N++ LL + P RSLE+ L +
Sbjct: 74 LLKHMKHENVIGLLDV----------------FTPARSLEEFNDVYLVTHLMGADLNNIV 117
Query: 179 WKTRLE------IILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLARE 232
+L +I GL Y+H +I+RD K SN+ ++ + + K+ FGLAR
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILGFGLARH 174
Query: 233 GPTGDHTHVSTAVVGTYGYAAPE-YIETGHLKSQSDIWSFGVVLYEILTGRRVL 285
T D T V T Y APE + H DIWS G ++ E+LTGR +
Sbjct: 175 --TDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 130/300 (43%), Gaps = 43/300 (14%)
Query: 51 LYKEKEHHLRVFDMQELREAT-NGFNRMLKIGEGGFGSVY------KGTIRPLDGRGEPL 103
L K KE L+ ++ A + F+R+ +G G FG V G + +
Sbjct: 19 LAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQK 78
Query: 104 VVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNR 163
VV +K++ + L E + L V+ P LVKL S +D + +V EY+
Sbjct: 79 VVKLKQIEHT--------LNEKRILQAVNFPFLVKL--EFSFKDNSNL--YMVMEYVAGG 126
Query: 164 SLEDRLFSRAQPTLPWKTRL---EIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNF 220
+ L + + P R +I+L YLH + +IYRD K N+L+D
Sbjct: 127 EMFSHLRRIGRFSEP-HARFYAAQIVLT----FEYLHS---LDLIYRDLKPENLLIDQQG 178
Query: 221 KPKLSDFGLAR--EGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEI 278
+++DFG A+ +G T + GT Y APE I + D W+ GV++YE+
Sbjct: 179 YIQVTDFGFAKRVKGRTW-------XLXGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Query: 279 LTGRRVLERNRPT-MEQKLLEWVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNC 337
G ++P + +K++ +FP+ FS + LRN ++ +R L +
Sbjct: 232 AAGYPPFFADQPIQIYEKIVSGKVRFPS---HFSSDLKDLLRNLLQVDLTKRFGNLKNGV 288
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 94/218 (43%), Gaps = 25/218 (11%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLN--NHGLQGHKQWLAEVQFLGVVSHPNLV 137
+GEG +G V T +P GE +VA+KK+ + L + L E++ L H N++
Sbjct: 19 LGEGAYGVVCSATHKP---TGE--IVAIKKIEPFDKPLFALRT-LREIKILKHFKHENII 72
Query: 138 KLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLH 197
+ + + + + + L R+ S L I + LH
Sbjct: 73 TIFNIQRPDSFENFNEVYIIQELMQTDLH-RVISTQM--LSDDHIQYFIYQTLRAVKVLH 129
Query: 198 EGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAR---------EGPTGDHTHVSTAVVGT 248
VI+RD K SN+L++ N K+ DFGLAR PTG + + V T
Sbjct: 130 GS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGM-VEFVAT 185
Query: 249 YGYAAPEYIETGHLKSQS-DIWSFGVVLYEILTGRRVL 285
Y APE + T S++ D+WS G +L E+ R +
Sbjct: 186 RWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIF 223
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 100/215 (46%), Gaps = 19/215 (8%)
Query: 71 TNGFNRMLKIGEGGFGSVYKGTIRPLDGRG-EPLVVAVKKLNNHGLQGHKQWLAEVQFLG 129
T + ++G+G F SV + ++ L G+ +++ KKL+ + H++ E +
Sbjct: 10 TEEYQLFEELGKGAF-SVVRRCVKVLAGQEYAAMIINTKKLSA---RDHQKLEREARICR 65
Query: 130 VVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGA 189
++ HPN+V+L S E L+++ + L + + +R + + I
Sbjct: 66 LLKHPNIVRLHDSISEEG----HHYLIFDLVTGGELFEDIVAREYYSEADASH--CIQQI 119
Query: 190 AEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFK---PKLSDFGLAREGPTGDHTHVSTAVV 246
E + + H+ + V++R+ K N+LL K KL+DFGLA E A
Sbjct: 120 LEAVLHCHQ---MGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFA-- 174
Query: 247 GTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTG 281
GT GY +PE + D+W+ GV+LY +L G
Sbjct: 175 GTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVG 209
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 130/300 (43%), Gaps = 43/300 (14%)
Query: 51 LYKEKEHHLRVFDMQELREAT-NGFNRMLKIGEGGFGSVY------KGTIRPLDGRGEPL 103
L K KE L+ ++ A + F+R+ +G G FG V G + +
Sbjct: 6 LAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQK 65
Query: 104 VVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNR 163
VV +K++ + L E + L V+ P LVKL S +D + +V EY+
Sbjct: 66 VVKLKQIEHT--------LNEKRILQAVNFPFLVKL--EFSFKDNSNL--YMVMEYVAGG 113
Query: 164 SLEDRLFSRAQPTLPWKTRL---EIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNF 220
+ L + + P R +I+L YLH + +IYRD K N+L+D
Sbjct: 114 EMFSHLRRIGRFSEP-HARFYAAQIVLT----FEYLHS---LDLIYRDLKPENLLIDEQG 165
Query: 221 KPKLSDFGLAR--EGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEI 278
+++DFG A+ +G T + GT Y APE I + D W+ GV++YE+
Sbjct: 166 YIQVTDFGFAKRVKGRTW-------XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 218
Query: 279 LTGRRVLERNRPT-MEQKLLEWVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNC 337
G ++P + +K++ +FP+ FS + LRN ++ +R L +
Sbjct: 219 AAGYPPFFADQPIQIYEKIVSGKVRFPS---HFSSDLKDLLRNLLQVDLTKRFGNLKNGV 275
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 97/234 (41%), Gaps = 46/234 (19%)
Query: 69 EATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNN--HGLQGHKQWLAEVQ 126
E + + +G G +GSV D + L VAVKKL+ + K+ E++
Sbjct: 19 EVPERYQNLSPVGSGAYGSVCAA----FDTKT-GLRVAVKKLSRPFQSIIHAKRTYRELR 73
Query: 127 FLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLED--------RLFSRAQPTLP 178
L + H N++ LL + P RSLE+ L +
Sbjct: 74 LLKHMKHENVIGLLDV----------------FTPARSLEEFNDVYLVTHLMGADLNNIV 117
Query: 179 WKTRLE------IILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLARE 232
+L +I GL Y+H +I+RD K SN+ ++ + + K+ D GLAR
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDAGLARH 174
Query: 233 GPTGDHTHVSTAVVGTYGYAAPE-YIETGHLKSQSDIWSFGVVLYEILTGRRVL 285
T D T V T Y APE + H DIWS G ++ E+LTGR +
Sbjct: 175 --TDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 98/219 (44%), Gaps = 28/219 (12%)
Query: 71 TNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGV 130
++ ++ ++G+G F V + + ++ KKL+ Q ++ E +
Sbjct: 4 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLER---EARICRK 60
Query: 131 VSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSL-ED----RLFSRAQPTLPWKTRLEI 185
+ HPN+V+L + S ++E LV++ + L ED +S A +
Sbjct: 61 LQHPNIVRL--HDSIQEESF--HYLVFDLVTGGELFEDIVAREFYSEADAS-------HC 109
Query: 186 ILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFK---PKLSDFGLAREGPTGDHTHVS 242
I E +AY H +++R+ K N+LL K KL+DFGLA E + H
Sbjct: 110 IQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH-- 164
Query: 243 TAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTG 281
GT GY +PE ++ DIW+ GV+LY +L G
Sbjct: 165 -GFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 202
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 129/300 (43%), Gaps = 43/300 (14%)
Query: 51 LYKEKEHHLRVFDMQELREAT-NGFNRMLKIGEGGFGSVY------KGTIRPLDGRGEPL 103
L K KE L+ ++ A + F+R+ +G G FG V G + +
Sbjct: 19 LAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQK 78
Query: 104 VVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNR 163
VV +K++ + L E + L V+ P LVKL S +D + +V EY+
Sbjct: 79 VVKLKQIEHT--------LNEKRILQAVNFPFLVKL--EFSFKDNSNL--YMVMEYVAGG 126
Query: 164 SLEDRLFSRAQPTLPWKTRL---EIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNF 220
+ L + + P R +I+L YLH + +IYRD K N+L+D
Sbjct: 127 EMFSHLRRIGRFSEP-HARFYAAQIVLT----FEYLHS---LDLIYRDLKPENLLIDQQG 178
Query: 221 KPKLSDFGLAR--EGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEI 278
+++DFG A+ +G T + GT Y APE I + D W+ GV++YE+
Sbjct: 179 YIQVTDFGFAKRVKGRTW-------XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Query: 279 LTGRRVLERNRPT-MEQKLLEWVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNC 337
G + P + +K++ +FP+ FS + LRN ++ +R L +
Sbjct: 232 AAGYPPFFADEPIQIYEKIVSGKVRFPS---HFSSDLKDLLRNLLQVDLTKRFGNLKNGV 288
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 129/298 (43%), Gaps = 43/298 (14%)
Query: 51 LYKEKEHHLRVFDMQELREAT-NGFNRMLKIGEGGFGSVY------KGTIRPLDGRGEPL 103
L K KE L+ ++ A + F+R+ +G G FG V G + +
Sbjct: 19 LAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQK 78
Query: 104 VVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNR 163
VV +K++ + L E + L V+ P LVKL S +D + +V EY+
Sbjct: 79 VVKLKQIEHT--------LNEKRILQAVNFPFLVKL--EFSFKDNSNL--YMVMEYVAGG 126
Query: 164 SLEDRLFSRAQPTLPWKTRL---EIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNF 220
+ L + P R +I+L YLH + +IYRD K N+L+D
Sbjct: 127 EMFSHLRRIGRFXEP-HARFYAAQIVLT----FEYLHS---LDLIYRDLKPENLLIDQQG 178
Query: 221 KPKLSDFGLAR--EGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEI 278
+++DFG A+ +G T + GT Y APE I + D W+ GV++YE+
Sbjct: 179 YIQVTDFGFAKRVKGRTW-------XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Query: 279 LTGRRVLERNRPT-MEQKLLEWVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLAD 335
G ++P + +K++ +FP+ FS + LRN ++ +R L +
Sbjct: 232 AAGYPPFFADQPIQIYEKIVSGKVRFPS---HFSSDLKDLLRNLLQVDLTKRFGNLKN 286
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 98/219 (44%), Gaps = 28/219 (12%)
Query: 71 TNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGV 130
++ ++ ++G+G F V + + ++ KKL+ Q ++ E +
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLER---EARICRK 61
Query: 131 VSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSL-ED----RLFSRAQPTLPWKTRLEI 185
+ HPN+V+L + S ++E LV++ + L ED +S A +
Sbjct: 62 LQHPNIVRL--HDSIQEESF--HYLVFDLVTGGELFEDIVAREFYSEADAS-------HC 110
Query: 186 ILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFK---PKLSDFGLAREGPTGDHTHVS 242
I E +AY H +++R+ K N+LL K KL+DFGLA E + H
Sbjct: 111 IQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH-- 165
Query: 243 TAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTG 281
GT GY +PE ++ DIW+ GV+LY +L G
Sbjct: 166 -GFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 95/208 (45%), Gaps = 21/208 (10%)
Query: 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQG--HKQWLAEVQFLGVVSHPNL 136
++G+G F SV + ++ L G+ A K +N L H++ E + ++ HPN+
Sbjct: 29 ELGKGAF-SVVRRCVKVLAGQE----YAAKIINTKKLSARDHQKLEREARICRLLKHPNI 83
Query: 137 VKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYL 196
V+L S E L+++ + L + + +R + + I E + +
Sbjct: 84 VRLHDSISEEG----HHYLIFDLVTGGELFEDIVAREYYSEADASH--CIQQILEAVLHC 137
Query: 197 HEGLEIQVIYRDFKTSNVLLDGNFK---PKLSDFGLAREGPTGDHTHVSTAVVGTYGYAA 253
H+ + V++RD K N+LL K KL+DFGLA E A GT GY +
Sbjct: 138 HQ---MGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFA--GTPGYLS 192
Query: 254 PEYIETGHLKSQSDIWSFGVVLYEILTG 281
PE + D+W+ GV+LY +L G
Sbjct: 193 PEVLRKDPYGKPVDLWACGVILYILLVG 220
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 129/300 (43%), Gaps = 43/300 (14%)
Query: 51 LYKEKEHHLRVFDMQELREAT-NGFNRMLKIGEGGFGSVY------KGTIRPLDGRGEPL 103
L K KE L+ ++ A + F+R+ +G G FG V G + +
Sbjct: 40 LAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQK 99
Query: 104 VVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNR 163
VV +K++ + L E + L V+ P LVKL S +D + +V EY+
Sbjct: 100 VVKLKQIEHT--------LNEKRILQAVNFPFLVKL--EFSFKDNSNL--YMVMEYVAGG 147
Query: 164 SLEDRLFSRAQPTLPWKTRL---EIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNF 220
+ L + P R +I+L YLH + +IYRD K N+L+D
Sbjct: 148 EMFSHLRRIGRFXEP-HARFYAAQIVLT----FEYLHS---LDLIYRDLKPENLLIDQQG 199
Query: 221 KPKLSDFGLAR--EGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEI 278
+++DFG A+ +G T + GT Y APE I + D W+ GV++YE+
Sbjct: 200 YIQVTDFGFAKRVKGRT-------WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 252
Query: 279 LTGRRVLERNRPT-MEQKLLEWVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNC 337
G ++P + +K++ +FP+ FS + LRN ++ +R L +
Sbjct: 253 AAGYPPFFADQPIQIYEKIVSGKVRFPS---HFSSDLKDLLRNLLQVDLTKRFGNLKNGV 309
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 95/234 (40%), Gaps = 46/234 (19%)
Query: 69 EATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNN--HGLQGHKQWLAEVQ 126
E + + +G G +GSV R VAVKKL+ + K+ E++
Sbjct: 19 EVPERYQNLSPVGSGAYGSVCAAFDTKTGHR-----VAVKKLSRPFQSIIHAKRTYRELR 73
Query: 127 FLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLED--------RLFSRAQPTLP 178
L + H N++ LL + P RSLE+ L +
Sbjct: 74 LLKHMKHENVIGLLDV----------------FTPARSLEEFNDVYLVTHLMGADLNNIV 117
Query: 179 WKTRLE------IILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLARE 232
+L +I GL Y+H +I+RD K SN+ ++ + + K+ DF LAR
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFYLARH 174
Query: 233 GPTGDHTHVSTAVVGTYGYAAPE-YIETGHLKSQSDIWSFGVVLYEILTGRRVL 285
T D T V T Y APE + H DIWS G ++ E+LTGR +
Sbjct: 175 --TDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 130/300 (43%), Gaps = 43/300 (14%)
Query: 51 LYKEKEHHLRVFDMQELREAT-NGFNRMLKIGEGGFGSVY------KGTIRPLDGRGEPL 103
L K KE L+ ++ A + F+R+ +G G FG V G + +
Sbjct: 19 LAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQK 78
Query: 104 VVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNR 163
VV +K++ + L E + L V+ P LVKL S +D + +V EY+
Sbjct: 79 VVKLKQIEHT--------LNEKRILQAVNFPFLVKL--EFSFKDNSNL--YMVMEYVAGG 126
Query: 164 SLEDRLFSRAQPTLPWKTRL---EIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNF 220
+ L + + P R +I+L YLH + +IYRD K N+++D
Sbjct: 127 EMFSHLRRIGRFSEP-HARFYAAQIVLT----FEYLHS---LDLIYRDLKPENLIIDQQG 178
Query: 221 KPKLSDFGLAR--EGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEI 278
+++DFG A+ +G T + GT Y APE I + D W+ GV++YE+
Sbjct: 179 YIQVTDFGFAKRVKGRTW-------XLCGTPEYLAPEIIISKGYNKAVDWWALGVLIYEM 231
Query: 279 LTGRRVLERNRPT-MEQKLLEWVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNC 337
G ++P + +K++ +FP+ FS + LRN ++ +R L +
Sbjct: 232 AAGYPPFFADQPIQIYEKIVSGKVRFPS---HFSSDLKDLLRNLLQVDLTKRFGNLKNGV 288
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 97/223 (43%), Gaps = 23/223 (10%)
Query: 105 VAVKKLNN-HGLQGH-KQWLAEVQFLGVVSHPNLVKLLGYCSTED--ERGIQRLLVYEYM 160
VAVKKL+ Q H K+ E+ L V+H N++ LL + + E LV E M
Sbjct: 52 VAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 111
Query: 161 PNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNF 220
+ L L + ++ G+ +LH +I+RD K SN+++ +
Sbjct: 112 -----DANLCQVIHMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDC 163
Query: 221 KPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILT 280
K+ DFGLAR T + T V T Y APE I + DIWS G ++ E++
Sbjct: 164 TLKILDFGLARTACTN---FMMTPYVVTRYYRAPEVILGMGYAANVDIWSVGCIMGELVK 220
Query: 281 GRRVLERNRPTMEQKLLEW---VKQFPADGKKFSMMIDPRLRN 320
G + + + +W ++Q +F + P +RN
Sbjct: 221 GCVIFQGT-----DHIDQWNKVIEQLGTPSAEFMAALQPTVRN 258
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 129/300 (43%), Gaps = 43/300 (14%)
Query: 51 LYKEKEHHLRVFDMQELREAT-NGFNRMLKIGEGGFGSVY------KGTIRPLDGRGEPL 103
L K KE L+ ++ A + F+R+ +G G FG V G + +
Sbjct: 19 LAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQK 78
Query: 104 VVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNR 163
VV +K++ + L E + L V+ P LVKL S +D + +V EY+
Sbjct: 79 VVKLKQIEHT--------LNEKRILQAVNFPFLVKL--EFSFKDNSNL--YMVMEYVAGG 126
Query: 164 SLEDRLFSRAQPTLPWKTRL---EIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNF 220
+ L + P R +I+L YLH + +IYRD K N+L+D
Sbjct: 127 EMFSHLRRIGRFXEP-HARFYAAQIVLT----FEYLHS---LDLIYRDLKPENLLIDQQG 178
Query: 221 KPKLSDFGLAR--EGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEI 278
+++DFG A+ +G T + GT Y APE I + D W+ GV++YE+
Sbjct: 179 YIQVTDFGFAKRVKGRTW-------XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Query: 279 LTGRRVLERNRPT-MEQKLLEWVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNC 337
G ++P + +K++ +FP+ FS + LRN ++ +R L +
Sbjct: 232 AAGYPPFFADQPIQIYEKIVSGKVRFPS---HFSSDLKDLLRNLLQVDLTKRFGNLKNGV 288
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 97/234 (41%), Gaps = 46/234 (19%)
Query: 69 EATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNN--HGLQGHKQWLAEVQ 126
E + + +G G +GSV D + L VAVKKL+ + K+ E++
Sbjct: 19 EVPERYQNLSPVGSGAYGSVCAA----FDTKT-GLRVAVKKLSRPFQSIIHAKRTYRELR 73
Query: 127 FLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLED--------RLFSRAQPTLP 178
L + H N++ LL + P RSLE+ L +
Sbjct: 74 LLKHMKHENVIGLLDV----------------FTPARSLEEFNDVYLVTHLMGADLNNIV 117
Query: 179 WKTRLE------IILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLARE 232
+L +I GL Y+H +I+RD K SN+ ++ + + K+ D GLAR
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDRGLARH 174
Query: 233 GPTGDHTHVSTAVVGTYGYAAPE-YIETGHLKSQSDIWSFGVVLYEILTGRRVL 285
T D T V T Y APE + H DIWS G ++ E+LTGR +
Sbjct: 175 --TDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 129/300 (43%), Gaps = 43/300 (14%)
Query: 51 LYKEKEHHLRVFDMQELREAT-NGFNRMLKIGEGGFGSVY------KGTIRPLDGRGEPL 103
L K KE L+ ++ A + F+R+ +G G FG V G + +
Sbjct: 19 LAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQK 78
Query: 104 VVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNR 163
VV +K++ + L E + L V+ P LVKL S +D + +V EY+
Sbjct: 79 VVKLKQIEHT--------LNEKRILQAVNFPFLVKL--EFSFKDNSNL--YMVMEYVAGG 126
Query: 164 SLEDRLFSRAQPTLPWKTRL---EIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNF 220
+ L + P R +I+L YLH + +IYRD K N+L+D
Sbjct: 127 EMFSHLRRIGRFXEP-HARFYAAQIVLT----FEYLHS---LDLIYRDLKPENLLIDQQG 178
Query: 221 KPKLSDFGLAR--EGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEI 278
+++DFG A+ +G T + GT Y APE I + D W+ GV++YE+
Sbjct: 179 YIQVTDFGFAKRVKGRTW-------XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Query: 279 LTGRRVLERNRPT-MEQKLLEWVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNC 337
G ++P + +K++ +FP+ FS + LRN ++ +R L +
Sbjct: 232 AAGYPPFFADQPIQIYEKIVSGKVRFPS---HFSSDLKDLLRNLLQVDLTKRFGNLKNGV 288
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 129/300 (43%), Gaps = 43/300 (14%)
Query: 51 LYKEKEHHLRVFDMQELREAT-NGFNRMLKIGEGGFGSVY------KGTIRPLDGRGEPL 103
L K KE L+ ++ A + F+R+ +G G FG V G + +
Sbjct: 14 LAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQK 73
Query: 104 VVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNR 163
VV +K++ + L E + L V+ P LVKL S +D + +V EY+
Sbjct: 74 VVKLKQIEHT--------LNEKRILQAVNFPFLVKL--EFSFKDNSNL--YMVMEYVAGG 121
Query: 164 SLEDRLFSRAQPTLPWKTRL---EIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNF 220
+ L + P R +I+L YLH + +IYRD K N+L+D
Sbjct: 122 EMFSHLRRIGRFXEP-HARFYAAQIVLT----FEYLHS---LDLIYRDLKPENLLIDQQG 173
Query: 221 KPKLSDFGLAR--EGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEI 278
+++DFG A+ +G T + GT Y APE I + D W+ GV++YE+
Sbjct: 174 YIQVTDFGFAKRVKGRTW-------XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 226
Query: 279 LTGRRVLERNRPT-MEQKLLEWVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNC 337
G ++P + +K++ +FP+ FS + LRN ++ +R L +
Sbjct: 227 AAGYPPFFADQPIQIYEKIVSGKVRFPS---HFSSDLKDLLRNLLQVDLTKRFGNLKNGV 283
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 85/181 (46%), Gaps = 15/181 (8%)
Query: 105 VAVKKLNN-HGLQGH-KQWLAEVQFLGVVSHPNLVKLLGYCSTED--ERGIQRLLVYEYM 160
VA+KKL+ Q H K+ E+ + VV+H N++ LL + + E +V E M
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 161 PNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNF 220
+ L Q L + ++ G+ +LH +I+RD K SN+++ +
Sbjct: 112 -----DANLSQVIQMELDHERMSYLLYQMLVGIKHLHSA---GIIHRDLKPSNIVVKSDA 163
Query: 221 KPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILT 280
K+ DFGLAR T + + T V T Y APE I K DIWS G ++ E++
Sbjct: 164 TLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIK 220
Query: 281 G 281
G
Sbjct: 221 G 221
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 85/181 (46%), Gaps = 15/181 (8%)
Query: 105 VAVKKLNN-HGLQGH-KQWLAEVQFLGVVSHPNLVKLLGYCSTED--ERGIQRLLVYEYM 160
VA+KKL+ Q H K+ E+ + VV+H N++ LL + + E +V E M
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 161 PNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNF 220
+ L Q L + ++ G+ +LH +I+RD K SN+++ +
Sbjct: 112 -----DANLSQVIQMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDA 163
Query: 221 KPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILT 280
K+ DFGLAR T + + T V T Y APE I K DIWS G ++ E++
Sbjct: 164 TLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIK 220
Query: 281 G 281
G
Sbjct: 221 G 221
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 57/131 (43%), Gaps = 9/131 (6%)
Query: 154 LLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSN 213
L+V E + L R+ R + EI E + YLH I + +RD K N
Sbjct: 135 LIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAIQYLHS---INIAHRDVKPEN 191
Query: 214 VLLDG---NFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWS 270
+L N KL+DFG A+E T H ++T Y Y APE + D WS
Sbjct: 192 LLYTSKRPNAILKLTDFGFAKE--TTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDXWS 248
Query: 271 FGVVLYEILTG 281
GV+ Y +L G
Sbjct: 249 LGVIXYILLCG 259
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 131/300 (43%), Gaps = 48/300 (16%)
Query: 77 MLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLN-NHGLQGHKQWLAEVQF-LGVVSHP 134
++++G G +G V K P G+ ++AVK++ Q K+ L ++ + V P
Sbjct: 12 IMELGRGAYGVVEKMRHVP---SGQ--IMAVKRIRATVNSQEQKRLLMDLDISMRTVDCP 66
Query: 135 NLVKLLGYCSTEDERGIQRLLVYEYMPNRSLED---RLFSRAQPTLPWKTRLEIILGAAE 191
V G E + I L+ + SL+ ++ + Q T+P +I + +
Sbjct: 67 FTVTFYGALFREGDVWICMELM-----DTSLDKFYKQVIDKGQ-TIPEDILGKIAVSIVK 120
Query: 192 GLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGY 251
L +LH L VI+RD K SNVL++ + K+ DFG++ G D G Y
Sbjct: 121 ALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGIS--GYLVDDV-AKDIDAGCKPY 175
Query: 252 AAPEYI-----ETGHLKSQSDIWSFGVVLYEILTGRRVLER-NRP--TMEQKLLEWVKQF 303
APE I + G+ +SDIWS G+ + E+ R + P ++Q + E Q
Sbjct: 176 MAPERINPELNQKGY-SVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQL 234
Query: 304 PADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQESE 363
PAD KFS CLKKN +ERPT ++++ + ES+
Sbjct: 235 PAD--KFS----------------AEFVDFTSQCLKKNSKERPTYPELMQHPFFTLHESK 276
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 130/300 (43%), Gaps = 43/300 (14%)
Query: 51 LYKEKEHHLRVFDMQELREAT-NGFNRMLKIGEGGFGSVY------KGTIRPLDGRGEPL 103
L K KE L+ ++ A + F+R+ +G G FG V G + +
Sbjct: 19 LAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQK 78
Query: 104 VVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNR 163
VV +K++ + L E + L V+ P LVKL S +D + +V EY+
Sbjct: 79 VVKLKQIEHT--------LNEKRILQAVNFPFLVKL--EFSFKDNSNL--YMVMEYVAGG 126
Query: 164 SLEDRLFSRAQPTLPWKTRL---EIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNF 220
+ L + + P R +I+L YLH + +IYRD K N+L+D
Sbjct: 127 EMFSHLRRIGRFSEP-HARFYAAQIVLT----FEYLHS---LDLIYRDLKPENLLIDQQG 178
Query: 221 KPKLSDFGLAR--EGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEI 278
+++DFG A+ +G T + GT Y APE I + D W+ GV++Y++
Sbjct: 179 YIQVTDFGFAKRVKGRTW-------XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYQM 231
Query: 279 LTGRRVLERNRPT-MEQKLLEWVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNC 337
G ++P + +K++ +FP+ FS + LRN ++ +R L +
Sbjct: 232 AAGYPPFFADQPIQIYEKIVSGKVRFPS---HFSSDLKDLLRNLLQVDLTKRFGNLKNGV 288
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 97/234 (41%), Gaps = 46/234 (19%)
Query: 69 EATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNN--HGLQGHKQWLAEVQ 126
E + + +G G +GSV D + L VAVKKL+ + K+ E++
Sbjct: 19 EVPERYQNLSPVGSGAYGSVCAA----FDTKT-GLRVAVKKLSRPFQSIIHAKRTYRELR 73
Query: 127 FLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLED--------RLFSRAQPTLP 178
L + H N++ LL + P RSLE+ L +
Sbjct: 74 LLKHMKHENVIGLLDV----------------FTPARSLEEFNDVYLVTHLMGADLNNIV 117
Query: 179 WKTRLE------IILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLARE 232
+L +I GL Y+H +I+RD K SN+ ++ + + K+ D GLAR
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDGGLARH 174
Query: 233 GPTGDHTHVSTAVVGTYGYAAPE-YIETGHLKSQSDIWSFGVVLYEILTGRRVL 285
T D T V T Y APE + H DIWS G ++ E+LTGR +
Sbjct: 175 --TDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 77/162 (47%), Gaps = 16/162 (9%)
Query: 124 EVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRL 183
EV L + HPN++ L E +L+ E + L D F + +L +
Sbjct: 64 EVSILKEIQHPNVITLHEVY----ENKTDVILILELVAGGELFD--FLAEKESLTEEEAT 117
Query: 184 EIILGAAEGLAYLHEGLEIQVIYRDFKTSNV-LLDGNF-KP--KLSDFGLAREGPTGDHT 239
E + G+ YLH +Q+ + D K N+ LLD N KP K+ DFGLA + G+
Sbjct: 118 EFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF 174
Query: 240 HVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTG 281
+ GT + APE + L ++D+WS GV+ Y +L+G
Sbjct: 175 K---NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 77/162 (47%), Gaps = 16/162 (9%)
Query: 124 EVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRL 183
EV L + HPN++ L E +L+ E + L D F + +L +
Sbjct: 64 EVSILKEIQHPNVITLHEVY----ENKTDVILILELVAGGELFD--FLAEKESLTEEEAT 117
Query: 184 EIILGAAEGLAYLHEGLEIQVIYRDFKTSNV-LLDGNF-KP--KLSDFGLAREGPTGDHT 239
E + G+ YLH +Q+ + D K N+ LLD N KP K+ DFGLA + G+
Sbjct: 118 EFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF 174
Query: 240 HVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTG 281
+ GT + APE + L ++D+WS GV+ Y +L+G
Sbjct: 175 K---NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 117/288 (40%), Gaps = 38/288 (13%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSH 133
N + K+ E G ++KG +G +VV V K+ + + + + E L + SH
Sbjct: 12 LNFLTKLNENHSGELWKGR-----WQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSH 66
Query: 134 PNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGL 193
PN++ +LG C + L+ + P SL + L + ++ L A G
Sbjct: 67 PNVLPVLGACQSPP--APHPTLITHWXPYGSLYNVLHEGTNFVVDQSQAVKFALDXARGX 124
Query: 194 AYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLS--DFGLAREGPTGDHTHVSTAVVGTYGY 251
A+LH LE + + +V +D + ++S D + + P + +
Sbjct: 125 AFLHT-LEPLIPRHALNSRSVXIDEDXTARISXADVKFSFQSPGRXYAP---------AW 174
Query: 252 AAPEYIET---GHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGK 308
APE ++ + +D WSF V+L+E++T R P + E + +G
Sbjct: 175 VAPEALQKKPEDTNRRSADXWSFAVLLWELVT------REVPFADLSNXEIGXKVALEG- 227
Query: 309 KFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLK 356
LR + V+KL C ++P +RP + +V L+
Sbjct: 228 ---------LRPTIPPGISPHVSKLXKICXNEDPAKRPKFDXIVPILE 266
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 84/181 (46%), Gaps = 15/181 (8%)
Query: 105 VAVKKLNN-HGLQGH-KQWLAEVQFLGVVSHPNLVKLLGYCSTED--ERGIQRLLVYEYM 160
VA+KKL+ Q H K+ E+ + V+H N++ LL + + E +V E M
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 161 PNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNF 220
+ L Q L + ++ G+ +LH +I+RD K SN+++ +
Sbjct: 112 -----DANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDC 163
Query: 221 KPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILT 280
K+ DFGLAR T + + T V T Y APE I K DIWS G ++ E++
Sbjct: 164 TLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIK 220
Query: 281 G 281
G
Sbjct: 221 G 221
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 99/227 (43%), Gaps = 53/227 (23%)
Query: 80 IGEGGFGSVYKGTIRPLDGR-GEPLVVAVKKLNNHGLQGH---KQWLAEVQFLGVVSHPN 135
+G G +GSV +D R GE VA+KKL+ Q K+ E+ L + H N
Sbjct: 32 VGSGAYGSVCSA----IDKRSGEK--VAIKKLSR-PFQSEIFAKRAYRELLLLKHMQHEN 84
Query: 136 LVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPW-KTRLEIILG------ 188
++ LL + P SL R F +P+ +T L+ I+G
Sbjct: 85 VIGLLDV----------------FTPASSL--RNFYDFYLVMPFMQTDLQKIMGLKFSEE 126
Query: 189 --------AAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTH 240
+GL Y+H V++RD K N+ ++ + + K+ DFGLAR
Sbjct: 127 KIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLARHADAE---- 179
Query: 241 VSTAVVGTYGYAAPEYIETG-HLKSQSDIWSFGVVLYEILTGRRVLE 286
T V T Y APE I + H DIWS G ++ E+LTG+ + +
Sbjct: 180 -MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFK 225
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 84/181 (46%), Gaps = 15/181 (8%)
Query: 105 VAVKKLNN-HGLQGH-KQWLAEVQFLGVVSHPNLVKLLGYCSTED--ERGIQRLLVYEYM 160
VA+KKL+ Q H K+ E+ + V+H N++ LL + + E +V E M
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 161 PNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNF 220
+ L Q L + ++ G+ +LH +I+RD K SN+++ +
Sbjct: 112 -----DANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDC 163
Query: 221 KPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILT 280
K+ DFGLAR T + + T V T Y APE I K DIWS G ++ E++
Sbjct: 164 TLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIK 220
Query: 281 G 281
G
Sbjct: 221 G 221
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 131/286 (45%), Gaps = 40/286 (13%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLA-EVQFLGVVS 132
++ + ++G G FG V++ + GR V V K N K + E+ + +
Sbjct: 53 YDILEELGSGAFGVVHR-CVEKATGR-----VFVAKFINTPYPLDKYTVKNEISIMNQLH 106
Query: 133 HPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEG 192
HP L+ L + + ED+ + +L+ E++ L DR+ + + + + A EG
Sbjct: 107 HPKLINL--HDAFEDK--YEMVLILEFLSGGELFDRIAAEDY-KMSEAEVINYMRQACEG 161
Query: 193 LAYLHEGLEIQVIYRDFKTSNVLLDGN--FKPKLSDFGLAREGPTGDHTHVSTAVVGTYG 250
L ++HE +++ D K N++ + K+ DFGLA + + V+TA T
Sbjct: 162 LKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTA---TAE 215
Query: 251 YAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVL--ERNRPTMEQ-KLLEWVKQFPADG 307
+AAPE ++ + +D+W+ GV+ Y +L+G E + T++ K +W +F D
Sbjct: 216 FAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDW--EFDEDA 273
Query: 308 KKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVE 353
FS + P ++ N L+K P +R T++ +E
Sbjct: 274 --FS-SVSPEAKD------------FIKNLLQKEPRKRLTVHDALE 304
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 77/162 (47%), Gaps = 16/162 (9%)
Query: 124 EVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRL 183
EV L + HPN++ L E +L+ E + L D F + +L +
Sbjct: 64 EVSILKEIQHPNVITLHEVY----ENKTDVILILELVAGGELFD--FLAEKESLTEEEAT 117
Query: 184 EIILGAAEGLAYLHEGLEIQVIYRDFKTSNV-LLDGNF-KP--KLSDFGLAREGPTGDHT 239
E + G+ YLH +Q+ + D K N+ LLD N KP K+ DFGLA + G+
Sbjct: 118 EFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF 174
Query: 240 HVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTG 281
+ GT + APE + L ++D+WS GV+ Y +L+G
Sbjct: 175 K---NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 84/181 (46%), Gaps = 15/181 (8%)
Query: 105 VAVKKLNN-HGLQGH-KQWLAEVQFLGVVSHPNLVKLLGYCSTED--ERGIQRLLVYEYM 160
VA+KKL+ Q H K+ E+ + V+H N++ LL + + E +V E M
Sbjct: 53 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 112
Query: 161 PNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNF 220
+ L Q L + ++ G+ +LH +I+RD K SN+++ +
Sbjct: 113 -----DANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDC 164
Query: 221 KPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILT 280
K+ DFGLAR T + + T V T Y APE I K DIWS G ++ E++
Sbjct: 165 TLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIK 221
Query: 281 G 281
G
Sbjct: 222 G 222
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 107/250 (42%), Gaps = 38/250 (15%)
Query: 124 EVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRL 183
EV L + HPN++ L E +L+ E + L D F + +L +
Sbjct: 64 EVSILKEIQHPNVITLHEVY----ENKTDVILILELVAGGELFD--FLAEKESLTEEEAT 117
Query: 184 EIILGAAEGLAYLHEGLEIQVIYRDFKTSNV-LLDGNF-KP--KLSDFGLAREGPTGDHT 239
E + G+ YLH +Q+ + D K N+ LLD N KP K+ DFGLA + G+
Sbjct: 118 EFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF 174
Query: 240 HVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEW 299
+ GT + APE + L ++D+WS GV+ Y +L+G
Sbjct: 175 K---NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG------------------ 213
Query: 300 VKQFPADGKKFSM----MIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESL 355
F D K+ ++ ++ ++Y N + L K+P++R T+ ++
Sbjct: 214 ASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHP 273
Query: 356 KLAVQESEQG 365
+ ++++Q
Sbjct: 274 WIKPKDTQQA 283
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 77/162 (47%), Gaps = 16/162 (9%)
Query: 124 EVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRL 183
EV L + HPN++ L E +L+ E + L D F + +L +
Sbjct: 64 EVSILKEIQHPNVITLHEVY----ENKTDVILILELVAGGELFD--FLAEKESLTEEEAT 117
Query: 184 EIILGAAEGLAYLHEGLEIQVIYRDFKTSNV-LLDGNF-KP--KLSDFGLAREGPTGDHT 239
E + G+ YLH +Q+ + D K N+ LLD N KP K+ DFGLA + G+
Sbjct: 118 EFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF 174
Query: 240 HVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTG 281
+ GT + APE + L ++D+WS GV+ Y +L+G
Sbjct: 175 K---NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 98/214 (45%), Gaps = 27/214 (12%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKL-NNHGLQGHKQ--WLAEVQFLGVVSHPNL 136
+G+GGF Y+ I +D + V A K + + L+ H++ E+ + +P++
Sbjct: 50 LGKGGFAKCYE--ITDMDTKE---VFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHV 104
Query: 137 VKLLGYCSTEDERGIQRLLVYEYMPNRSL---EDRLFSRAQPTLPWKTRLEIILGAAEGL 193
V G+ +D + V E RSL R + +P + R I +G+
Sbjct: 105 VGFHGFFEDDDFVYV----VLEICRRRSLLELHKRRKAVTEPEARYFMRQTI-----QGV 155
Query: 194 AYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAA 253
YLH +VI+RD K N+ L+ + K+ DFGLA + + GT Y A
Sbjct: 156 QYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER--KKTLCGTPNYIA 210
Query: 254 PEYI-ETGHLKSQSDIWSFGVVLYEILTGRRVLE 286
PE + + GH + DIWS G +LY +L G+ E
Sbjct: 211 PEVLCKKGH-SFEVDIWSLGCILYTLLVGKPPFE 243
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 84/181 (46%), Gaps = 15/181 (8%)
Query: 105 VAVKKLNN-HGLQGH-KQWLAEVQFLGVVSHPNLVKLLGYCSTED--ERGIQRLLVYEYM 160
VA+KKL+ Q H K+ E+ + V+H N++ LL + + E +V E M
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 161 PNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNF 220
+ L Q L + ++ G+ +LH +I+RD K SN+++ +
Sbjct: 112 -----DANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDC 163
Query: 221 KPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILT 280
K+ DFGLAR T + + T V T Y APE I K DIWS G ++ E++
Sbjct: 164 TLKILDFGLAR---TAGTSFMMTPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIK 220
Query: 281 G 281
G
Sbjct: 221 G 221
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 77/162 (47%), Gaps = 16/162 (9%)
Query: 124 EVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRL 183
EV L + HPN++ L E +L+ E + L D F + +L +
Sbjct: 64 EVSILKEIQHPNVITLHEVY----ENKTDVILILELVAGGELFD--FLAEKESLTEEEAT 117
Query: 184 EIILGAAEGLAYLHEGLEIQVIYRDFKTSNV-LLDGNF-KP--KLSDFGLAREGPTGDHT 239
E + G+ YLH +Q+ + D K N+ LLD N KP K+ DFGLA + G+
Sbjct: 118 EFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF 174
Query: 240 HVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTG 281
+ GT + APE + L ++D+WS GV+ Y +L+G
Sbjct: 175 K---NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 107/250 (42%), Gaps = 38/250 (15%)
Query: 124 EVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRL 183
EV L + HPN++ L E +L+ E + L D F + +L +
Sbjct: 64 EVSILKEIQHPNVITLHEVY----ENKTDVILILELVAGGELFD--FLAEKESLTEEEAT 117
Query: 184 EIILGAAEGLAYLHEGLEIQVIYRDFKTSNV-LLDGNF-KP--KLSDFGLAREGPTGDHT 239
E + G+ YLH +Q+ + D K N+ LLD N KP K+ DFGLA + G+
Sbjct: 118 EFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF 174
Query: 240 HVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEW 299
+ GT + APE + L ++D+WS GV+ Y +L+G
Sbjct: 175 K---NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG------------------ 213
Query: 300 VKQFPADGKKFSM----MIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESL 355
F D K+ ++ ++ ++Y N + L K+P++R T+ ++
Sbjct: 214 ASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHP 273
Query: 356 KLAVQESEQG 365
+ ++++Q
Sbjct: 274 WIKPKDTQQA 283
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 77/162 (47%), Gaps = 16/162 (9%)
Query: 124 EVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRL 183
EV L + HPN++ L E +L+ E + L D F + +L +
Sbjct: 64 EVSILKEIQHPNVITLHEVY----ENKTDVILILELVAGGELFD--FLAEKESLTEEEAT 117
Query: 184 EIILGAAEGLAYLHEGLEIQVIYRDFKTSNV-LLDGNF-KP--KLSDFGLAREGPTGDHT 239
E + G+ YLH +Q+ + D K N+ LLD N KP K+ DFGLA + G+
Sbjct: 118 EFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF 174
Query: 240 HVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTG 281
+ GT + APE + L ++D+WS GV+ Y +L+G
Sbjct: 175 K---NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 107/250 (42%), Gaps = 38/250 (15%)
Query: 124 EVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRL 183
EV L + HPN++ L E +L+ E + L D F + +L +
Sbjct: 64 EVSILKEIQHPNVITLHEVY----ENKTDVILILELVAGGELFD--FLAEKESLTEEEAT 117
Query: 184 EIILGAAEGLAYLHEGLEIQVIYRDFKTSNV-LLDGNF-KP--KLSDFGLAREGPTGDHT 239
E + G+ YLH +Q+ + D K N+ LLD N KP K+ DFGLA + G+
Sbjct: 118 EFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF 174
Query: 240 HVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEW 299
+ GT + APE + L ++D+WS GV+ Y +L+G
Sbjct: 175 K---NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG------------------ 213
Query: 300 VKQFPADGKKFSM----MIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESL 355
F D K+ ++ ++ ++Y N + L K+P++R T+ ++
Sbjct: 214 ASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHP 273
Query: 356 KLAVQESEQG 365
+ ++++Q
Sbjct: 274 WIKPKDTQQA 283
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 107/250 (42%), Gaps = 38/250 (15%)
Query: 124 EVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRL 183
EV L + HPN++ L E +L+ E + L D F + +L +
Sbjct: 63 EVSILKEIQHPNVITLHEVY----ENKTDVILILELVAGGELFD--FLAEKESLTEEEAT 116
Query: 184 EIILGAAEGLAYLHEGLEIQVIYRDFKTSNV-LLDGNF-KP--KLSDFGLAREGPTGDHT 239
E + G+ YLH +Q+ + D K N+ LLD N KP K+ DFGLA + G+
Sbjct: 117 EFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF 173
Query: 240 HVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEW 299
+ GT + APE + L ++D+WS GV+ Y +L+G
Sbjct: 174 K---NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG------------------ 212
Query: 300 VKQFPADGKKFSM----MIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESL 355
F D K+ ++ ++ ++Y N + L K+P++R T+ ++
Sbjct: 213 ASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHP 272
Query: 356 KLAVQESEQG 365
+ ++++Q
Sbjct: 273 WIKPKDTQQA 282
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 77/162 (47%), Gaps = 16/162 (9%)
Query: 124 EVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRL 183
EV L + HPN++ L E +L+ E + L D F + +L +
Sbjct: 64 EVSILKEIQHPNVITLHEVY----ENKTDVILILELVAGGELFD--FLAEKESLTEEEAT 117
Query: 184 EIILGAAEGLAYLHEGLEIQVIYRDFKTSNV-LLDGNF-KP--KLSDFGLAREGPTGDHT 239
E + G+ YLH +Q+ + D K N+ LLD N KP K+ DFGLA + G+
Sbjct: 118 EFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF 174
Query: 240 HVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTG 281
+ GT + APE + L ++D+WS GV+ Y +L+G
Sbjct: 175 K---NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 99/227 (43%), Gaps = 53/227 (23%)
Query: 80 IGEGGFGSVYKGTIRPLDGR-GEPLVVAVKKLNNHGLQGH---KQWLAEVQFLGVVSHPN 135
+G G +GSV +D R GE VA+KKL+ Q K+ E+ L + H N
Sbjct: 50 VGSGAYGSVCSA----IDKRSGEK--VAIKKLSR-PFQSEIFAKRAYRELLLLKHMQHEN 102
Query: 136 LVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPW-KTRLEIILGAA---- 190
++ LL + P SL R F +P+ +T L+ I+G
Sbjct: 103 VIGLLDV----------------FTPASSL--RNFYDFYLVMPFMQTDLQKIMGMEFSEE 144
Query: 191 ----------EGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTH 240
+GL Y+H V++RD K N+ ++ + + K+ DFGLAR
Sbjct: 145 KIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLARHADAE---- 197
Query: 241 VSTAVVGTYGYAAPEYIETG-HLKSQSDIWSFGVVLYEILTGRRVLE 286
T V T Y APE I + H DIWS G ++ E+LTG+ + +
Sbjct: 198 -MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFK 243
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 107/250 (42%), Gaps = 38/250 (15%)
Query: 124 EVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRL 183
EV L + HPN++ L E +L+ E + L D F + +L +
Sbjct: 63 EVSILKEIQHPNVITLHEVY----ENKTDVILILELVAGGELFD--FLAEKESLTEEEAT 116
Query: 184 EIILGAAEGLAYLHEGLEIQVIYRDFKTSNV-LLDGNF-KP--KLSDFGLAREGPTGDHT 239
E + G+ YLH +Q+ + D K N+ LLD N KP K+ DFGLA + G+
Sbjct: 117 EFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF 173
Query: 240 HVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEW 299
+ GT + APE + L ++D+WS GV+ Y +L+G
Sbjct: 174 K---NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG------------------ 212
Query: 300 VKQFPADGKKFSM----MIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESL 355
F D K+ ++ ++ ++Y N + L K+P++R T+ ++
Sbjct: 213 ASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHP 272
Query: 356 KLAVQESEQG 365
+ ++++Q
Sbjct: 273 WIKPKDTQQA 282
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 103/220 (46%), Gaps = 27/220 (12%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKL 139
+G GG G V+ D R VA+KK+ Q K L E++ + + H N+VK+
Sbjct: 19 LGCGGNGLVFSAVDNDCDKR-----VAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKV 73
Query: 140 L------GYCSTEDERGIQRL----LVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGA 189
G T+D + L +V EYM L + L P L RL +
Sbjct: 74 FEILGPSGSQLTDDVGSLTELNSVYIVQEYM-ETDLANVL--EQGPLLEEHARL-FMYQL 129
Query: 190 AEGLAYLHEGLEIQVIYRDFKTSNVLLDG-NFKPKLSDFGLAR-EGPTGDHT-HVSTAVV 246
GL Y+H V++RD K +N+ ++ + K+ DFGLAR P H H+S +V
Sbjct: 130 LRGLKYIHSA---NVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLV 186
Query: 247 GTYGYAAPEYIETGHLKSQS-DIWSFGVVLYEILTGRRVL 285
T Y +P + + + +++ D+W+ G + E+LTG+ +
Sbjct: 187 -TKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLF 225
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 98/214 (45%), Gaps = 27/214 (12%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKL-NNHGLQGHKQ--WLAEVQFLGVVSHPNL 136
+G+GGF Y+ I +D + V A K + + L+ H++ E+ + +P++
Sbjct: 50 LGKGGFAKCYE--ITDMDTKE---VFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHV 104
Query: 137 VKLLGYCSTEDERGIQRLLVYEYMPNRSL---EDRLFSRAQPTLPWKTRLEIILGAAEGL 193
V G+ +D + V E RSL R + +P + R I +G+
Sbjct: 105 VGFHGFFEDDDFVYV----VLEICRRRSLLELHKRRKAVTEPEARYFMRQTI-----QGV 155
Query: 194 AYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAA 253
YLH +VI+RD K N+ L+ + K+ DFGLA + + GT Y A
Sbjct: 156 QYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER--KKXLCGTPNYIA 210
Query: 254 PEYI-ETGHLKSQSDIWSFGVVLYEILTGRRVLE 286
PE + + GH + DIWS G +LY +L G+ E
Sbjct: 211 PEVLCKKGH-SFEVDIWSLGCILYTLLVGKPPFE 243
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 129/300 (43%), Gaps = 43/300 (14%)
Query: 51 LYKEKEHHLRVFDMQELREAT-NGFNRMLKIGEGGFGSVY------KGTIRPLDGRGEPL 103
L K KE L+ ++ A + F+R+ +G G FG V G + +
Sbjct: 19 LAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQK 78
Query: 104 VVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNR 163
VV +K++ + L E + L V+ P LVKL S +D + +V EY+
Sbjct: 79 VVKLKQIEHT--------LNEKRILQAVNFPFLVKL--EFSFKDNSNL--YMVMEYVAGG 126
Query: 164 SLEDRLFSRAQPTLPWKTRL---EIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNF 220
+ L + + P R +I+L YLH + +IYRD K N+L+D
Sbjct: 127 EMFSHLRRIGRFSEP-HARFYAAQIVLT----FEYLHS---LDLIYRDLKPENLLIDQQG 178
Query: 221 KPKLSDFGLAR--EGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEI 278
+++DFG A+ +G T + GT Y AP I + D W+ GV++YE+
Sbjct: 179 YIQVTDFGFAKRVKGRTW-------XLCGTPEYLAPAIILSKGYNKAVDWWALGVLIYEM 231
Query: 279 LTGRRVLERNRPT-MEQKLLEWVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNC 337
G ++P + +K++ +FP+ FS + LRN ++ +R L +
Sbjct: 232 AAGYPPFFADQPIQIYEKIVSGKVRFPS---HFSSDLKDLLRNLLQVDLTKRFGNLKNGV 288
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 84/181 (46%), Gaps = 15/181 (8%)
Query: 105 VAVKKLNN-HGLQGH-KQWLAEVQFLGVVSHPNLVKLLGYCSTED--ERGIQRLLVYEYM 160
VA+KKL+ Q H K+ E+ + V+H N++ LL + + E +V E M
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 161 PNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNF 220
+ L Q L + ++ G+ +LH +I+RD K SN+++ +
Sbjct: 112 -----DANLSQVIQMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDC 163
Query: 221 KPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILT 280
K+ DFGLAR T + + T V T Y APE I K DIWS G ++ E++
Sbjct: 164 TLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIK 220
Query: 281 G 281
G
Sbjct: 221 G 221
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 95/214 (44%), Gaps = 17/214 (7%)
Query: 71 TNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGV 130
T+ + ++G+G F V + P ++ KKL+ + H++ E + +
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSA---RDHQKLEREARICRL 59
Query: 131 VSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAA 190
+ HPN+V+L S E G LV++ + L + + +R + + I
Sbjct: 60 LKHPNIVRLHDSIS---EEGFH-YLVFDLVTGGELFEDIVAREYYSEADASH--CIQQIL 113
Query: 191 EGLAYLHEGLEIQVIYRDFKTSNVLLDGNFK---PKLSDFGLAREGPTGDHTHVSTAVVG 247
E + + H +++RD K N+LL K KL+DFGLA E GD G
Sbjct: 114 ESVNHCHLN---GIVHRDLKPENLLLASKSKGAAVKLADFGLAIE-VQGDQ-QAWFGFAG 168
Query: 248 TYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTG 281
T GY +PE + D+W+ GV+LY +L G
Sbjct: 169 TPGYLSPEVLRKDPYGKPVDMWACGVILYILLVG 202
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 114/271 (42%), Gaps = 31/271 (11%)
Query: 71 TNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQG--HKQWLAEVQFL 128
T+ + IG+G F SV + ++ G A K +N L H++ E +
Sbjct: 3 TDEYQLYEDIGKGAF-SVVRRCVKLCTGHE----YAAKIINTKKLSARDHQKLEREARIC 57
Query: 129 GVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLED----RLFSRAQPTLPWKTRLE 184
++ H N+V+L S E G L+ ED +S A + + LE
Sbjct: 58 RLLKHSNIVRLHDSIS---EEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILE 114
Query: 185 IILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFK---PKLSDFGLAREGPTGDHTHV 241
+L + H+ + V++RD K N+LL K KL+DFGLA E GD
Sbjct: 115 AVL-------HCHQ---MGVVHRDLKPENLLLASKCKGAAVKLADFGLAIE-VQGDQ-QA 162
Query: 242 STAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGR-RVLERNRPTMEQKLLEWV 300
GT GY +PE + DIW+ GV+LY +L G + ++ + Q++
Sbjct: 163 WFGFAGTPGYLSPEVLRKEAYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGA 222
Query: 301 KQFPADGKKFSMMIDPRLRNQY-SINAARRV 330
FP+ L NQ +IN A+R+
Sbjct: 223 YDFPSPEWDTVTPEAKNLINQMLTINPAKRI 253
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 100/235 (42%), Gaps = 32/235 (13%)
Query: 124 EVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTR- 182
EV L + HPN++ L E +L+ E + L D L + T T+
Sbjct: 58 EVNILREIRHPNIITLHDIF----ENKTDVVLILELVSGGELFDFLAEKESLTEDEATQF 113
Query: 183 LEIILGAAEGLAYLHEGLEIQVIYRDFKTSNV-LLDGNF---KPKLSDFGLAREGPTGDH 238
L+ IL +G+ YLH ++ + D K N+ LLD N + KL DFG+A + G+
Sbjct: 114 LKQIL---DGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNE 167
Query: 239 THVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLE 298
+ GT + APE + L ++D+WS GV+ Y +L+G P + + E
Sbjct: 168 F---KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG------ASPFLGETKQE 218
Query: 299 WVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVE 353
+ A F +Y N + L K+P+ R T+ Q +E
Sbjct: 219 TLTNISAVNYDFD--------EEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLE 265
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 98/214 (45%), Gaps = 27/214 (12%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKL-NNHGLQGHKQ--WLAEVQFLGVVSHPNL 136
+G+GGF Y+ I +D + V A K + + L+ H++ E+ + +P++
Sbjct: 50 LGKGGFAKCYE--ITDMDTKE---VFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHV 104
Query: 137 VKLLGYCSTEDERGIQRLLVYEYMPNRSL---EDRLFSRAQPTLPWKTRLEIILGAAEGL 193
V G+ +D + V E RSL R + +P + R I +G+
Sbjct: 105 VGFHGFFEDDDFVYV----VLEICRRRSLLELHKRRKAVTEPEARYFMRQTI-----QGV 155
Query: 194 AYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAA 253
YLH +VI+RD K N+ L+ + K+ DFGLA + + GT Y A
Sbjct: 156 QYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER--KKDLCGTPNYIA 210
Query: 254 PEYI-ETGHLKSQSDIWSFGVVLYEILTGRRVLE 286
PE + + GH + DIWS G +LY +L G+ E
Sbjct: 211 PEVLCKKGH-SFEVDIWSLGCILYTLLVGKPPFE 243
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 129/300 (43%), Gaps = 43/300 (14%)
Query: 51 LYKEKEHHLRVFDMQELREAT-NGFNRMLKIGEGGFGSVY------KGTIRPLDGRGEPL 103
L K KE L+ ++ A + F+R+ +G G FG V G + +
Sbjct: 19 LAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQK 78
Query: 104 VVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNR 163
VV +K++ + L E + L V+ P LVKL S +D + +V EY+
Sbjct: 79 VVKLKQIEHT--------LNEKRILQAVNFPFLVKL--EFSFKDNSNL--YMVMEYVAGG 126
Query: 164 SLEDRLFSRAQPTLPWKTRL---EIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNF 220
+ L + + P R +I+L YLH + +IYRD K N+L+D
Sbjct: 127 EMFSHLRRIGRFSEP-HARFYAAQIVLT----FEYLHS---LDLIYRDLKPENLLIDQQG 178
Query: 221 KPKLSDFGLAR--EGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEI 278
+++DFG A+ +G T + GT Y APE I + D W+ GV++YE+
Sbjct: 179 YIQVTDFGFAKRVKGRTW-------XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Query: 279 LTGRRVLERNRPT-MEQKLLEWVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNC 337
G ++P + +K++ +FP+ FS + LRN ++ + L +
Sbjct: 232 AAGYPPFFADQPIQIYEKIVSGKVRFPS---HFSSDLKDLLRNLLQVDLTKAFGNLKNGV 288
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 96/211 (45%), Gaps = 22/211 (10%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNN--HGLQGHKQWLAEVQFLGVVSHPNLV 137
+G G +GSV L + VAVKKL+ L ++ E++ L + H N++
Sbjct: 36 VGSGAYGSVCSAYDARLRQK-----VAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVI 90
Query: 138 KLLGYCS--TEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAY 195
LL + T E + LV M L + + S+A L + ++ GL Y
Sbjct: 91 GLLDVFTPATSIEDFSEVYLVTTLM-GADLNNIVKSQA---LSDEHVQFLVYQLLRGLKY 146
Query: 196 LHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPE 255
+H +I+RD K SNV ++ + + ++ DFGLAR+ T V T Y APE
Sbjct: 147 IHSA---GIIHRDLKPSNVAVNEDSELRILDFGLARQA-----DEEMTGYVATRWYRAPE 198
Query: 256 -YIETGHLKSQSDIWSFGVVLYEILTGRRVL 285
+ H DIWS G ++ E+L G+ +
Sbjct: 199 IMLNWMHYNQTVDIWSVGCIMAELLQGKALF 229
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 92/210 (43%), Gaps = 31/210 (14%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKL 139
IG G +G V +G + A KK+ + ++ ++ E++ + + HPN+++L
Sbjct: 17 IGRGSWGEVKIAV-----QKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRL 71
Query: 140 LGYCSTEDERGIQRLLVYEY-----MPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLA 194
Y + ED I LV E + R + R+F + I+ +A
Sbjct: 72 --YETFEDNTDI--YLVMELCTGGELFERVVHKRVFRESDAA-------RIMKDVLSAVA 120
Query: 195 YLHEGLEIQVIYRDFKTSNVLL--DGNFKP-KLSDFGLAREGPTGDHTHVSTAVVGTYGY 251
Y H ++ V +RD K N L D P KL DFGLA G VGT Y
Sbjct: 121 YCH---KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTK---VGTPYY 174
Query: 252 AAPEYIETGHLKSQSDIWSFGVVLYEILTG 281
+P+ +E G + D WS GV++Y +L G
Sbjct: 175 VSPQVLE-GLYGPECDEWSAGVMMYVLLCG 203
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 84/181 (46%), Gaps = 15/181 (8%)
Query: 105 VAVKKLNN-HGLQGH-KQWLAEVQFLGVVSHPNLVKLLGYCSTED--ERGIQRLLVYEYM 160
VA+KKL+ Q H K+ E+ + V+H N++ LL + + E +V E M
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 161 PNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNF 220
+ L Q L + ++ G+ +LH +I+RD K SN+++ +
Sbjct: 112 -----DANLSQVIQMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDA 163
Query: 221 KPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILT 280
K+ DFGLAR T + + T V T Y APE I K DIWS G ++ E++
Sbjct: 164 TLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIK 220
Query: 281 G 281
G
Sbjct: 221 G 221
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 98/214 (45%), Gaps = 27/214 (12%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKL-NNHGLQGHKQ--WLAEVQFLGVVSHPNL 136
+G+GGF Y+ I +D + V A K + + L+ H++ E+ + +P++
Sbjct: 34 LGKGGFAKCYE--ITDMDTKE---VFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHV 88
Query: 137 VKLLGYCSTEDERGIQRLLVYEYMPNRSL---EDRLFSRAQPTLPWKTRLEIILGAAEGL 193
V G+ +D + V E RSL R + +P + R I +G+
Sbjct: 89 VGFHGFFEDDDFVYV----VLEICRRRSLLELHKRRKAVTEPEARYFMRQTI-----QGV 139
Query: 194 AYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAA 253
YLH +VI+RD K N+ L+ + K+ DFGLA + + GT Y A
Sbjct: 140 QYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER--KKDLCGTPNYIA 194
Query: 254 PEYI-ETGHLKSQSDIWSFGVVLYEILTGRRVLE 286
PE + + GH + DIWS G +LY +L G+ E
Sbjct: 195 PEVLCKKGH-SFEVDIWSLGCILYTLLVGKPPFE 227
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 92/210 (43%), Gaps = 31/210 (14%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKL 139
IG G +G V +G + A KK+ + ++ ++ E++ + + HPN+++L
Sbjct: 34 IGRGSWGEVKIAV-----QKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRL 88
Query: 140 LGYCSTEDERGIQRLLVYEY-----MPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLA 194
Y + ED I LV E + R + R+F + I+ +A
Sbjct: 89 --YETFEDNTDI--YLVMELCTGGELFERVVHKRVFRESDAA-------RIMKDVLSAVA 137
Query: 195 YLHEGLEIQVIYRDFKTSNVLL--DGNFKP-KLSDFGLAREGPTGDHTHVSTAVVGTYGY 251
Y H ++ V +RD K N L D P KL DFGLA G VGT Y
Sbjct: 138 YCH---KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTK---VGTPYY 191
Query: 252 AAPEYIETGHLKSQSDIWSFGVVLYEILTG 281
+P+ +E G + D WS GV++Y +L G
Sbjct: 192 VSPQVLE-GLYGPECDEWSAGVMMYVLLCG 220
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 83/181 (45%), Gaps = 15/181 (8%)
Query: 105 VAVKKLNN-HGLQGH-KQWLAEVQFLGVVSHPNLVKLLGYCSTED--ERGIQRLLVYEYM 160
VA+KKL+ Q H K+ E+ + V+H N++ LL + + E +V E M
Sbjct: 54 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 113
Query: 161 PNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNF 220
+ L Q L + ++ G+ +LH +I+RD K SN+++ +
Sbjct: 114 -----DANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDC 165
Query: 221 KPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILT 280
K+ DFGLAR T + + V T Y APE I K DIWS G ++ E++
Sbjct: 166 TLKILDFGLAR---TAGTSFMMVPFVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIK 222
Query: 281 G 281
G
Sbjct: 223 G 223
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 93/214 (43%), Gaps = 28/214 (13%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNN--HGLQGHKQWLAEVQFLGVVSHPNLV 137
+G G +GSV L + VAVKKL+ L ++ E++ L + H N++
Sbjct: 28 VGSGAYGSVCSAYDARLRQK-----VAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVI 82
Query: 138 KLLGYCS--TEDERGIQRLLVYEYMP---NRSLEDRLFSRAQPTLPWKTRLEIILGAAEG 192
LL + T E + LV M N ++ + S ++ G
Sbjct: 83 GLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQF-------LVYQLLRG 135
Query: 193 LAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYA 252
L Y+H +I+RD K SNV ++ + + ++ DFGLAR+ T V T Y
Sbjct: 136 LKYIHSA---GIIHRDLKPSNVAVNEDCELRILDFGLARQA-----DEEMTGYVATRWYR 187
Query: 253 APE-YIETGHLKSQSDIWSFGVVLYEILTGRRVL 285
APE + H DIWS G ++ E+L G+ +
Sbjct: 188 APEIMLNWMHYNQTVDIWSVGCIMAELLQGKALF 221
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 95/214 (44%), Gaps = 17/214 (7%)
Query: 71 TNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGV 130
T+ + ++G+G F V + P ++ KKL+ + H++ E + +
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSA---RDHQKLEREARICRL 59
Query: 131 VSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAA 190
+ HPN+V+L S E G LV++ + L + + +R + + I
Sbjct: 60 LKHPNIVRLHDSIS---EEGFH-YLVFDLVTGGELFEDIVAREYYSEADASH--CIQQIL 113
Query: 191 EGLAYLHEGLEIQVIYRDFKTSNVLLDGNFK---PKLSDFGLAREGPTGDHTHVSTAVVG 247
E + + H +++RD K N+LL K KL+DFGLA E GD G
Sbjct: 114 ESVNHCHLN---GIVHRDLKPENLLLASKSKGAAVKLADFGLAIE-VQGDQ-QAWFGFAG 168
Query: 248 TYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTG 281
T GY +PE + D+W+ GV+LY +L G
Sbjct: 169 TPGYLSPEVLRKDPYGKPVDMWACGVILYILLVG 202
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 107/250 (42%), Gaps = 38/250 (15%)
Query: 124 EVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRL 183
EV L + HPN++ L E +L+ E + L D F + +L +
Sbjct: 64 EVSILKEIQHPNVITLHEVY----ENKTDVILIGELVAGGELFD--FLAEKESLTEEEAT 117
Query: 184 EIILGAAEGLAYLHEGLEIQVIYRDFKTSNV-LLDGNF-KP--KLSDFGLAREGPTGDHT 239
E + G+ YLH +Q+ + D K N+ LLD N KP K+ DFGLA + G+
Sbjct: 118 EFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF 174
Query: 240 HVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEW 299
+ GT + APE + L ++D+WS GV+ Y +L+G
Sbjct: 175 ---KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG------------------ 213
Query: 300 VKQFPADGKKFSM----MIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESL 355
F D K+ ++ ++ ++Y N + L K+P++R T+ ++
Sbjct: 214 ASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHP 273
Query: 356 KLAVQESEQG 365
+ ++++Q
Sbjct: 274 WIKPKDTQQA 283
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 73/157 (46%), Gaps = 25/157 (15%)
Query: 133 HPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRL-----FSRAQPTLPWKTRLEIIL 187
HPN+V+ T I V EY L +R+ FS + ++ +
Sbjct: 74 HPNIVRFKEVILTPTHLAI----VMEYASGGELFERICNAGRFSEDEARFFFQQLIS--- 126
Query: 188 GAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKP--KLSDFGLAREGPTGDHTHVSTAV 245
G++Y H +QV +RD K N LLDG+ P K++DFG ++ H+ +A
Sbjct: 127 ----GVSYAHA---MQVAHRDLKLENTLLDGSPAPRLKIADFGYSKASVL--HSQPKSA- 176
Query: 246 VGTYGYAAPEYIETGHLKSQ-SDIWSFGVVLYEILTG 281
VGT Y APE + + +D+WS GV LY +L G
Sbjct: 177 VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 92/215 (42%), Gaps = 20/215 (9%)
Query: 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVK 138
K+GEGGF V ++G + A+K++ H Q ++ E + +HPN+++
Sbjct: 36 KLGEGGFSYV-----DLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILR 90
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLEDRL--FSRAQPTLPWKTRLEIILGAAEGLAYL 196
L+ YC E + L+ + +L + + L L ++LG GL +
Sbjct: 91 LVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAI 150
Query: 197 HEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPT---GDHTHVS----TAVVGTY 249
H +RD K +N+LL +P L D G + G ++ A T
Sbjct: 151 HAK---GYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTI 207
Query: 250 GYAAPEYIET-GH--LKSQSDIWSFGVVLYEILTG 281
Y APE H + ++D+WS G VLY ++ G
Sbjct: 208 SYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFG 242
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 99/223 (44%), Gaps = 23/223 (10%)
Query: 105 VAVKKLNN-HGLQGH-KQWLAEVQFLGVVSHPNLVKLLGYCSTED--ERGIQRLLVYEYM 160
VA+KKL+ Q H K+ E+ + V+H N++ LL + + E +V E M
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 161 PNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNF 220
+ L Q L + ++ G+ +LH +I+RD K SN+++ +
Sbjct: 112 -----DANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDC 163
Query: 221 KPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILT 280
K+ DFGLAR G + VV Y Y APE I K DIWS G ++ E++
Sbjct: 164 TLKILDFGLARTA--GTSFMMEPEVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVC 220
Query: 281 GRRVLERNRPTMEQKLLEW---VKQFPADGKKFSMMIDPRLRN 320
++L R ++Q W ++Q F + P +RN
Sbjct: 221 -HKILFPGRDYIDQ----WNKVIEQLGTPCPAFMKKLQPTVRN 258
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 127/289 (43%), Gaps = 31/289 (10%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNN--HGLQGHKQWLAEVQFLGVVSHPNLV 137
+G G +G+V +DGR VA+KKL K+ E++ L + H N++
Sbjct: 33 VGSGAYGAVCSA----VDGRTGA-KVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVI 87
Query: 138 KLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLH 197
LL T DE Y MP + + + + + ++ +GL Y+H
Sbjct: 88 GLLD-VFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQF-LVYQMLKGLRYIH 145
Query: 198 EGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYI 257
+I+RD K N+ ++ + + K+ DFGLAR+ + V T Y APE I
Sbjct: 146 AA---GIIHRDLKPGNLAVNEDCELKILDFGLARQADSE-----MXGXVVTRWYRAPEVI 197
Query: 258 ETGHLKSQS-DIWSFGVVLYEILTGRRVLERNRPTMEQKLL---------EWVKQFPADG 307
+Q+ DIWS G ++ E++TG+ + + + + K + E+V++ +D
Sbjct: 198 LNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDE 257
Query: 308 KKFSMMIDPRLRNQYSINAARRVAKLADNCLKK----NPEERPTMNQVV 352
K M P L + + + LA N L+K + E+R T + +
Sbjct: 258 AKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEAL 306
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 95/218 (43%), Gaps = 23/218 (10%)
Query: 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGH---KQWLAEVQFL 128
+ F + IG+G FG V ++ D + + A+K +N + E+Q +
Sbjct: 15 DHFEILRAIGKGSFGKV--CIVQKNDTKK---MYAMKYMNKQKCVERNEVRNVFKELQIM 69
Query: 129 GVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILG 188
+ HP LV L + S +DE + +V + + L R + +T I
Sbjct: 70 QGLEHPFLVNL--WYSFQDEEDM--FMVVDLLLGGDL--RYHLQQNVHFKEETVKLFICE 123
Query: 189 AAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGT 248
L YL ++I+RD K N+LLD + ++DF +A P T ++T + GT
Sbjct: 124 LVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPR--ETQITT-MAGT 177
Query: 249 YGYAAPEYIETGHLKSQS---DIWSFGVVLYEILTGRR 283
Y APE + S D WS GV YE+L GRR
Sbjct: 178 KPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRR 215
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 108/240 (45%), Gaps = 37/240 (15%)
Query: 119 KQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLED----RLFSRAQ 174
+Q E+ L + HPN+VKL+ +E + +V+E + + + + S Q
Sbjct: 81 EQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHL--YMVFELVNQGPVMEVPTLKPLSEDQ 138
Query: 175 PTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGP 234
++ ++ G+ YLH ++I+RD K SN+L+ + K++DFG++ E
Sbjct: 139 ARFYFQDLIK-------GIEYLHYQ---KIIHRDIKPSNLLVGEDGHIKIADFGVSNEFK 188
Query: 235 TGDHTHVSTAVVGTYGYAAPEYI-ETGHLKSQS--DIWSFGVVLYEILTGRRVLERNRPT 291
D +T VGT + APE + ET + S D+W+ GV LY + G+ P
Sbjct: 189 GSDALLSNT--VGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQ------CPF 240
Query: 292 MEQKLLEWVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQV 351
M+++++ + + +F D A + L L KNPE R + ++
Sbjct: 241 MDERIMCLHSKIKSQALEFPDQPD----------IAEDLKDLITRMLDKNPESRIVVPEI 290
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 129/300 (43%), Gaps = 43/300 (14%)
Query: 51 LYKEKEHHLRVFDMQELREAT-NGFNRMLKIGEGGFGSVY------KGTIRPLDGRGEPL 103
L K KE L+ ++ A + F+R+ +G G FG V G + +
Sbjct: 19 LAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQK 78
Query: 104 VVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNR 163
VV +K++ + L E + L V+ P LVKL S +D + +V EY+
Sbjct: 79 VVKLKQIEHT--------LNEKRILQAVNFPFLVKL--EFSFKDNSNL--YMVMEYVAGG 126
Query: 164 SLEDRLFSRAQPTLPWKTRL---EIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNF 220
+ L + + P R +I+L YLH + +IYRD K N+L+D
Sbjct: 127 EMFSHLRRIGRFSEP-HARFYAAQIVLT----FEYLHS---LDLIYRDLKPENLLIDQQG 178
Query: 221 KPKLSDFGLAR--EGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEI 278
+++DFG A+ +G T + GT APE I + D W+ GV++YE+
Sbjct: 179 YIQVTDFGFAKRVKGRTW-------XLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEM 231
Query: 279 LTGRRVLERNRPT-MEQKLLEWVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNC 337
G ++P + +K++ +FP+ FS + LRN ++ +R L +
Sbjct: 232 AAGYPPFFADQPIQIYEKIVSGKVRFPS---HFSSDLKDLLRNLLQVDLTKRFGNLKNGV 288
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 104/243 (42%), Gaps = 20/243 (8%)
Query: 69 EATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKK--LNNHGLQGHKQWLAEVQ 126
+ + + ++ KIG+G FG V+K R + VA+KK + N L E++
Sbjct: 15 DEVSKYEKLAKIGQGTFGEVFKARHRKTGQK-----VALKKVLMENEKEGFPITALREIK 69
Query: 127 FLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEI- 185
L ++ H N+V L+ C T+ R Y+ E L L T EI
Sbjct: 70 ILQLLKHENVVNLIEICRTK-ASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIK 128
Query: 186 --ILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVST 243
+ GL Y+H ++++RD K +NVL+ + KL+DFGLAR ++ +
Sbjct: 129 RVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNR 185
Query: 244 AV--VGTYGYAAPE-YIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWV 300
V T Y PE + D+W G ++ E+ T +++ N EQ L +
Sbjct: 186 YXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGN---TEQHQLALI 242
Query: 301 KQF 303
Q
Sbjct: 243 SQL 245
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 95/219 (43%), Gaps = 31/219 (14%)
Query: 71 TNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGV 130
++ ++ + IG G FG R + + +VAVK + G + E+
Sbjct: 19 SDRYDFVKDIGSGNFG-----VARLMRDKLTKELVAVKYIER-GAAIDENVQREIINHRS 72
Query: 131 VSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRL-----FSRAQPTLPWKTRLEI 185
+ HPN+V+ T I + EY L +R+ FS + ++ L
Sbjct: 73 LRHPNIVRFKEVILTPTHLAI----IMEYASGGELYERICNAGRFSEDEARFFFQQLLS- 127
Query: 186 ILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKP--KLSDFGLAREGPTGDHTHVST 243
G++Y H +Q+ +RD K N LLDG+ P K+ DFG ++ H+
Sbjct: 128 ------GVSYCHS---MQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVL--HSQ-PK 175
Query: 244 AVVGTYGYAAPEYIETGHLKSQ-SDIWSFGVVLYEILTG 281
+ VGT Y APE + + +D+WS GV LY +L G
Sbjct: 176 STVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVG 214
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 61/125 (48%), Gaps = 13/125 (10%)
Query: 192 GLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGY 251
GL +LH+ +IYRD K NVLLD + ++SD GLA E G + GT G+
Sbjct: 301 GLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK--TKGYAGTPGF 355
Query: 252 AAPEYIETGHLKSQSDIWSFGVVLYEILTGR-----RVLERNRPTMEQKLLEWVKQFPAD 306
APE + D ++ GV LYE++ R R + ++Q++LE +P
Sbjct: 356 MAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYP-- 413
Query: 307 GKKFS 311
KFS
Sbjct: 414 -DKFS 417
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 61/125 (48%), Gaps = 13/125 (10%)
Query: 192 GLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGY 251
GL +LH+ +IYRD K NVLLD + ++SD GLA E G + GT G+
Sbjct: 301 GLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK--TKGYAGTPGF 355
Query: 252 AAPEYIETGHLKSQSDIWSFGVVLYEILTGR-----RVLERNRPTMEQKLLEWVKQFPAD 306
APE + D ++ GV LYE++ R R + ++Q++LE +P
Sbjct: 356 MAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYP-- 413
Query: 307 GKKFS 311
KFS
Sbjct: 414 -DKFS 417
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 61/125 (48%), Gaps = 13/125 (10%)
Query: 192 GLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGY 251
GL +LH+ +IYRD K NVLLD + ++SD GLA E G + GT G+
Sbjct: 301 GLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK--TKGYAGTPGF 355
Query: 252 AAPEYIETGHLKSQSDIWSFGVVLYEILTGR-----RVLERNRPTMEQKLLEWVKQFPAD 306
APE + D ++ GV LYE++ R R + ++Q++LE +P
Sbjct: 356 MAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYP-- 413
Query: 307 GKKFS 311
KFS
Sbjct: 414 -DKFS 417
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 61/125 (48%), Gaps = 13/125 (10%)
Query: 192 GLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGY 251
GL +LH+ +IYRD K NVLLD + ++SD GLA E G + GT G+
Sbjct: 301 GLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK--TKGYAGTPGF 355
Query: 252 AAPEYIETGHLKSQSDIWSFGVVLYEILTGR-----RVLERNRPTMEQKLLEWVKQFPAD 306
APE + D ++ GV LYE++ R R + ++Q++LE +P
Sbjct: 356 MAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYP-- 413
Query: 307 GKKFS 311
KFS
Sbjct: 414 -DKFS 417
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 107/233 (45%), Gaps = 42/233 (18%)
Query: 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKK--LNNHGLQGHKQWLAEVQFLGVV 131
F + +G GGFG V++ + D A+K+ L N L ++ + EV+ L +
Sbjct: 7 FEPIQCLGRGGFGVVFEAKNKVDDCN-----YAIKRIRLPNREL-AREKVMREVKALAKL 60
Query: 132 SHPNLVKLLGYCSTEDERGIQRLL------VYEYMP-----NRSLEDRLFSRAQPTLPWK 180
HP +V+ Y + E+ L VY Y+ +L+D + R T+ +
Sbjct: 61 EHPGIVR---YFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRC--TIEER 115
Query: 181 TR---LEIILGAAEGLAYLH-EGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGL--AREGP 234
R L I L AE + +LH +GL ++RD K SN+ + K+ DFGL A +
Sbjct: 116 ERSVCLHIFLQIAEAVEFLHSKGL----MHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQD 171
Query: 235 TGDHTHVS--------TAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEIL 279
+ T ++ T VGT Y +PE I + DI+S G++L+E+L
Sbjct: 172 EEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 93/214 (43%), Gaps = 28/214 (13%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNN--HGLQGHKQWLAEVQFLGVVSHPNLV 137
+G G +GSV L + VAVKKL+ L ++ E++ L + H N++
Sbjct: 36 VGSGAYGSVCSAYDARLRQK-----VAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVI 90
Query: 138 KLLGYCS--TEDERGIQRLLVYEYMP---NRSLEDRLFSRAQPTLPWKTRLEIILGAAEG 192
LL + T E + LV M N ++ + S ++ G
Sbjct: 91 GLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQF-------LVYQLLRG 143
Query: 193 LAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYA 252
L Y+H +I+RD K SNV ++ + + ++ DFGLAR+ T V T Y
Sbjct: 144 LKYIHSA---GIIHRDLKPSNVAVNEDSELRILDFGLARQA-----DEEMTGYVATRWYR 195
Query: 253 APE-YIETGHLKSQSDIWSFGVVLYEILTGRRVL 285
APE + H DIWS G ++ E+L G+ +
Sbjct: 196 APEIMLNWMHYNQTVDIWSVGCIMAELLQGKALF 229
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 91/200 (45%), Gaps = 21/200 (10%)
Query: 105 VAVKKLNN-HGLQGH-KQWLAEVQFLGVVSHPNLVKLLGYCSTED--ERGIQRLLVYEYM 160
VA+KKL+ Q H K+ E+ + V+H N++ LL + + E +V E M
Sbjct: 57 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 116
Query: 161 PNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNF 220
+ L Q L + ++ G+ +LH +I+RD K SN+++ +
Sbjct: 117 -----DANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDC 168
Query: 221 KPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILT 280
K+ DFGLAR T + + T V T Y APE I K D+WS G ++ E++
Sbjct: 169 TLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVC 225
Query: 281 ------GRRVLERNRPTMEQ 294
GR +++ +EQ
Sbjct: 226 HKILFPGRDYIDQWNKVIEQ 245
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 115/255 (45%), Gaps = 39/255 (15%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG-LQGHKQWLAEVQFLGVVSHPNLVK 138
I GG G +Y R ++GR V +K L + G + +AE QFL V HP++V+
Sbjct: 88 IAHGGLGWIYLALDRNVNGRP----VVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQ 143
Query: 139 LLGYCSTEDERGIQ-RLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLH 197
+ + D G +V EY+ +SL+ S+ Q LP + +L L+YLH
Sbjct: 144 IFNFVEHTDRHGDPVGYIVMEYVGGQSLKR---SKGQ-KLPVAEAIAYLLEILPALSYLH 199
Query: 198 EGLEIQVIYRDFKTSNVLLDGNFKPKLSDFG-LAREGPTGDHTHVSTAVVGTYGYAAPEY 256
I ++Y D K N++L + KL D G ++R G + GT G+ APE
Sbjct: 200 ---SIGLVYNDLKPENIMLTEE-QLKLIDLGAVSRINSFG-------YLYGTPGFQAPEI 248
Query: 257 IETGHLKSQSDIWSFGVVLYEIL------TGRRV--LERNRPTMEQKLLEWVKQFPADGK 308
+ TG + +DI++ G L + GR V L + P + K + + G+
Sbjct: 249 VRTGPTVA-TDIYTVGRTLAALTLDLPTRNGRYVDGLPEDDPVL--------KTYDSYGR 299
Query: 309 KFSMMIDPRLRNQYS 323
IDP R +++
Sbjct: 300 LLRRAIDPDPRQRFT 314
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 91/200 (45%), Gaps = 21/200 (10%)
Query: 105 VAVKKLNN-HGLQGH-KQWLAEVQFLGVVSHPNLVKLLGYCSTED--ERGIQRLLVYEYM 160
VA+KKL+ Q H K+ E+ + V+H N++ LL + + E +V E M
Sbjct: 46 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 105
Query: 161 PNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNF 220
+ L Q L + ++ G+ +LH +I+RD K SN+++ +
Sbjct: 106 -----DANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDC 157
Query: 221 KPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILT 280
K+ DFGLAR T + + T V T Y APE I K D+WS G ++ E++
Sbjct: 158 TLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVC 214
Query: 281 ------GRRVLERNRPTMEQ 294
GR +++ +EQ
Sbjct: 215 HKILFPGRDYIDQWNKVIEQ 234
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 94/221 (42%), Gaps = 24/221 (10%)
Query: 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVK 138
K+G G +G VYK + + A+K++ G+ E+ L + HPN++
Sbjct: 28 KVGRGTYGHVYKAKRK---DGKDDKDYALKQIEGTGISMSA--CREIALLRELKHPNVIS 82
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPT------LPWKTRLEIILGAAEG 192
L + +R + L+++Y + F RA LP ++ +G
Sbjct: 83 LQKVFLSHADRKV--WLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDG 140
Query: 193 LAYLHEGLEIQVIYRDFKTSNVLLDGNF----KPKLSDFGLAR--EGPTGDHTHVSTAVV 246
+ YLH V++RD K +N+L+ G + K++D G AR P + VV
Sbjct: 141 IHYLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVV 197
Query: 247 GTYGYAAPEYIETG-HLKSQSDIWSFGVVLYEILTGRRVLE 286
T+ Y APE + H DIW+ G + E+LT +
Sbjct: 198 -TFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFH 237
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 100/252 (39%), Gaps = 39/252 (15%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNN--HGLQGHKQWLAEVQFLGVVSHPNLV 137
IG G +G VY + + VA+KK+N L K+ L E+ L + ++
Sbjct: 36 IGRGSYGYVYLAYDKNANKN-----VAIKKVNRMFEDLIDCKRILREITILNRLKSDYII 90
Query: 138 KLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIIL-GAAEGLAYL 196
+L ED L + + + L+ +LF P + ++ IL G ++
Sbjct: 91 RLHDLIIPEDLLKFDELYIVLEIADSDLK-KLFK--TPIFLTEQHVKTILYNLLLGEKFI 147
Query: 197 HEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVS-------------- 242
HE +I+RD K +N LL+ + K+ DFGLAR + H+
Sbjct: 148 HES---GIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEKEENEEPGP 204
Query: 243 ---------TAVVGTYGYAAPEYIETGHLKSQS-DIWSFGVVLYEILTGRRVLERNRPTM 292
T+ V T Y APE I + S DIWS G + E+L + N PT
Sbjct: 205 HNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELLNMMKS-HINNPTN 263
Query: 293 EQKLLEWVKQFP 304
L FP
Sbjct: 264 RFPLFPGSSCFP 275
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 82/200 (41%), Gaps = 41/200 (20%)
Query: 133 HPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRL-----FSRAQPTLPWKTRLEIIL 187
HPN+V+ T I V EY L +R+ FS + ++ +
Sbjct: 73 HPNIVRFKEVILTPTHLAI----VMEYASGGELFERICNAGRFSEDEARFFFQQLIS--- 125
Query: 188 GAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKP--KLSDFGLAREGPTGDHTHVSTAV 245
G++Y H +QV +RD K N LLDG+ P K+ DFG ++ H+ +
Sbjct: 126 ----GVSYCHA---MQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVL--HSQ-PKST 175
Query: 246 VGTYGYAAPEYIETGHLKSQ-SDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFP 304
VGT Y APE + + +D+WS GV LY +L G E P
Sbjct: 176 VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFED----------------P 219
Query: 305 ADGKKFSMMIDPRLRNQYSI 324
+ K F I L QY+I
Sbjct: 220 EEPKNFRKTIHRILNVQYAI 239
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 73/162 (45%), Gaps = 16/162 (9%)
Query: 124 EVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRL 183
EV L V HPN++ L E +L+ E + L D F + +L +
Sbjct: 65 EVSILRQVLHPNIITLHDVY----ENRTDVVLILELVSGGELFD--FLAQKESLSEEEAT 118
Query: 184 EIILGAAEGLAYLHEGLEIQVIYRDFKTSNV-LLDGNF---KPKLSDFGLAREGPTGDHT 239
I +G+ YLH ++ + D K N+ LLD N KL DFGLA E G
Sbjct: 119 SFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF 175
Query: 240 HVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTG 281
+ GT + APE + L ++D+WS GV+ Y +L+G
Sbjct: 176 ---KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 90/207 (43%), Gaps = 14/207 (6%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKL 139
IG+G F V + R + +V V K + + E ++ HP++V+L
Sbjct: 34 IGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVEL 93
Query: 140 LGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRL--EIILGAAEGLAYLH 197
L S++ +V+E+M L + RA + + + E L Y H
Sbjct: 94 LETYSSDG----MLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCH 149
Query: 198 EGLEIQVIYRDFKTSNVLLDG--NFKP-KLSDFGLAREGPTGDHTHVSTAVVGTYGYAAP 254
+ +I+RD K VLL N P KL FG+A + G+ V+ VGT + AP
Sbjct: 150 DN---NIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQ--LGESGLVAGGRVGTPHFMAP 204
Query: 255 EYIETGHLKSQSDIWSFGVVLYEILTG 281
E ++ D+W GV+L+ +L+G
Sbjct: 205 EVVKREPYGKPVDVWGCGVILFILLSG 231
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 82/200 (41%), Gaps = 41/200 (20%)
Query: 133 HPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRL-----FSRAQPTLPWKTRLEIIL 187
HPN+V+ T I V EY L +R+ FS + ++ +
Sbjct: 74 HPNIVRFKEVILTPTHLAI----VMEYASGGELFERICNAGRFSEDEARFFFQQLIS--- 126
Query: 188 GAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKP--KLSDFGLAREGPTGDHTHVSTAV 245
G++Y H +QV +RD K N LLDG+ P K+ DFG ++ H+ +
Sbjct: 127 ----GVSYCHA---MQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVL--HSQ-PKST 176
Query: 246 VGTYGYAAPEYIETGHLKSQ-SDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFP 304
VGT Y APE + + +D+WS GV LY +L G E P
Sbjct: 177 VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFED----------------P 220
Query: 305 ADGKKFSMMIDPRLRNQYSI 324
+ K F I L QY+I
Sbjct: 221 EEPKNFRKTIHRILNVQYAI 240
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 90/207 (43%), Gaps = 14/207 (6%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKL 139
IG+G F V + R + +V V K + + E ++ HP++V+L
Sbjct: 32 IGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVEL 91
Query: 140 LGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRL--EIILGAAEGLAYLH 197
L S++ +V+E+M L + RA + + + E L Y H
Sbjct: 92 LETYSSDG----MLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCH 147
Query: 198 EGLEIQVIYRDFKTSNVLLDG--NFKP-KLSDFGLAREGPTGDHTHVSTAVVGTYGYAAP 254
+ +I+RD K VLL N P KL FG+A + G+ V+ VGT + AP
Sbjct: 148 DN---NIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQ--LGESGLVAGGRVGTPHFMAP 202
Query: 255 EYIETGHLKSQSDIWSFGVVLYEILTG 281
E ++ D+W GV+L+ +L+G
Sbjct: 203 EVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 95/231 (41%), Gaps = 32/231 (13%)
Query: 64 MQELREATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL--QGHKQW 121
++++R F + IG G FG V ++ D V A+K LN + +
Sbjct: 66 VKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADK-----VFAMKILNKWEMLKRAETAC 120
Query: 122 LAEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLP--- 178
E + + V + L Y +D LV +Y L L S+ + LP
Sbjct: 121 FREERDVLVNGDSKWITTLHYAFQDDN---NLYLVMDYYVGGDLL-TLLSKFEDRLPEEM 176
Query: 179 ---WKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPT 235
+ + I + + L Y+H RD K N+L+D N +L+DFG +
Sbjct: 177 ARFYLAEMVIAIDSVHQLHYVH---------RDIKPDNILMDMNGHIRLADFGSCLK-LM 226
Query: 236 GDHTHVSTAVVGTYGYAAPEYIET-----GHLKSQSDIWSFGVVLYEILTG 281
D T S+ VGT Y +PE ++ G + D WS GV +YE+L G
Sbjct: 227 EDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYG 277
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 121/288 (42%), Gaps = 59/288 (20%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHK------QWLAEVQFLGVVS- 132
+G+GGFG+V+ G L R L VA+K + + + G EV L V
Sbjct: 39 LGKGGFGTVFAG--HRLTDR---LQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGA 93
Query: 133 ---HPNLVKLLGYCSTEDERGIQRLLVYEY-MPNRSLEDRLFSRAQPTLPWKTRLEIILG 188
HP +++LL + T++ +LV E +P + L D + + P +R
Sbjct: 94 GGGHPGVIRLLDWFETQE----GFMLVLERPLPAQDLFDYITEKG-PLGEGPSRCFF--- 145
Query: 189 AAEGLAYLHEGLEIQVIYRDFKTSNVLLD-GNFKPKLSDFGLAREGPTGD--HTHVSTAV 245
+ +A + V++RD K N+L+D KL DFG +G H T
Sbjct: 146 -GQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFG------SGALLHDEPYTDF 198
Query: 246 VGTYGYAAPEYIETGHLKS-QSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFP 304
GT Y+ PE+I + + +WS G++LY+++ G ER++ +E +L FP
Sbjct: 199 DGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQEILEAEL-----HFP 253
Query: 305 ADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVV 352
A + + L CL P RP++ +++
Sbjct: 254 A-------------------HVSPDCCALIRRCLAPKPSSRPSLEEIL 282
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 56/114 (49%), Gaps = 4/114 (3%)
Query: 192 GLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGY 251
L YLH +I+RD K N+LL+ + +++DFG A+ + A VGT Y
Sbjct: 142 ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQY 198
Query: 252 AAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLER-NRPTMEQKLLEWVKQFP 304
+PE + SD+W+ G ++Y+++ G N + QK+++ FP
Sbjct: 199 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP 252
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 104/243 (42%), Gaps = 20/243 (8%)
Query: 69 EATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKK--LNNHGLQGHKQWLAEVQ 126
+ + + ++ KIG+G FG V+K R + VA+KK + N L E++
Sbjct: 15 DEVSKYEKLAKIGQGTFGEVFKARHRKTGQK-----VALKKVLMENEKEGFPITALREIK 69
Query: 127 FLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEI- 185
L ++ H N+V L+ C T+ R Y+ E L L T EI
Sbjct: 70 ILQLLKHENVVNLIEICRTK-ASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIK 128
Query: 186 --ILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVST 243
+ GL Y+H ++++RD K +NVL+ + KL+DFGLAR ++ +
Sbjct: 129 RVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNR 185
Query: 244 AV--VGTYGYAAPE-YIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWV 300
V T Y PE + D+W G ++ E+ T +++ N EQ L +
Sbjct: 186 YXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGN---TEQHQLALI 242
Query: 301 KQF 303
Q
Sbjct: 243 SQL 245
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 101/212 (47%), Gaps = 30/212 (14%)
Query: 80 IGEGGFGS-VYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVS-HPNLV 137
+G G G+ VY+G D R VAVK++ + EVQ L HPN++
Sbjct: 32 LGHGAEGTIVYRGM---FDNRD----VAVKRILPECFSFADR---EVQLLRESDEHPNVI 81
Query: 138 KLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLH 197
+ Y TE +R Q + + + +L++ + + L + + ++ GLA+LH
Sbjct: 82 R---YFCTEKDRQFQYIAIE--LCAATLQEYVEQKDFAHLGLEP-ITLLQQTTSGLAHLH 135
Query: 198 EGLEIQVIYRDFKTSNVLLD-----GNFKPKLSDFGLAREGPTGDHTHV-STAVVGTYGY 251
+ +++RD K N+L+ G K +SDFGL ++ G H+ + V GT G+
Sbjct: 136 S---LNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGW 192
Query: 252 AAPEYIETGHLKSQS---DIWSFGVVLYEILT 280
APE + ++ + DI+S G V Y +++
Sbjct: 193 IAPEMLSEDCKENPTYTVDIFSAGCVFYYVIS 224
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 76/177 (42%), Gaps = 14/177 (7%)
Query: 131 VSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLED--RLFSRAQPTLPWKTRLEIILG 188
+ HP VKL +C +DE+ L Y N L R T EI+
Sbjct: 94 LDHPFFVKLY-FCFQDDEKLYFGL---SYAKNGELLKYIRKIGSFDETCTRFYTAEIV-- 147
Query: 189 AAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGT 248
L YLH +I+RD K N+LL+ + +++DFG A+ + VGT
Sbjct: 148 --SALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 202
Query: 249 YGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLER-NRPTMEQKLLEWVKQFP 304
Y +PE + SD+W+ G ++Y+++ G N + QK+++ FP
Sbjct: 203 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP 259
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 56/115 (48%), Gaps = 4/115 (3%)
Query: 192 GLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGY 251
L YLH +I+RD K N+LL+ + +++DFG A+ + VGT Y
Sbjct: 147 ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 203
Query: 252 AAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLER-NRPTMEQKLLEWVKQFPA 305
+PE + SD+W+ G ++Y+++ G N + QK+++ FPA
Sbjct: 204 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPA 258
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 78/163 (47%), Gaps = 18/163 (11%)
Query: 124 EVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTR- 182
EV L + HPN++ L E +L+ E + L D L + T T+
Sbjct: 65 EVNILREIRHPNIITLHDIF----ENKTDVVLILELVSGGELFDFLAEKESLTEDEATQF 120
Query: 183 LEIILGAAEGLAYLHEGLEIQVIYRDFKTSNV-LLDGNF---KPKLSDFGLAREGPTGDH 238
L+ IL +G+ YLH ++ + D K N+ LLD N + KL DFG+A + G+
Sbjct: 121 LKQIL---DGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNE 174
Query: 239 THVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTG 281
+ GT + APE + L ++D+WS GV+ Y +L+G
Sbjct: 175 F---KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 56/114 (49%), Gaps = 4/114 (3%)
Query: 192 GLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGY 251
L YLH +I+RD K N+LL+ + +++DFG A+ + + VGT Y
Sbjct: 144 ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQY 200
Query: 252 AAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLER-NRPTMEQKLLEWVKQFP 304
+PE + SD+W+ G ++Y+++ G N + QK+++ FP
Sbjct: 201 VSPELLTEKSASKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP 254
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 104/243 (42%), Gaps = 20/243 (8%)
Query: 69 EATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKK--LNNHGLQGHKQWLAEVQ 126
+ + + ++ KIG+G FG V+K R + VA+KK + N L E++
Sbjct: 15 DEVSKYEKLAKIGQGTFGEVFKARHRKTGQK-----VALKKVLMENEKEGFPITALREIK 69
Query: 127 FLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEI- 185
L ++ H N+V L+ C T+ R Y+ E L L T EI
Sbjct: 70 ILQLLKHENVVNLIEICRTK-ASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIK 128
Query: 186 --ILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVST 243
+ GL Y+H ++++RD K +NVL+ + KL+DFGLAR ++ +
Sbjct: 129 RVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNR 185
Query: 244 AV--VGTYGYAAPE-YIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWV 300
V T Y PE + D+W G ++ E+ T +++ N EQ L +
Sbjct: 186 YXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGN---TEQHQLALI 242
Query: 301 KQF 303
Q
Sbjct: 243 SQL 245
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 106/244 (43%), Gaps = 22/244 (9%)
Query: 69 EATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKK--LNNHGLQGHKQWLAEVQ 126
+ + + ++ KIG+G FG V+K R + VA+KK + N L E++
Sbjct: 14 DEVSKYEKLAKIGQGTFGEVFKARHRKTGQK-----VALKKVLMENEKEGFPITALREIK 68
Query: 127 FLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEI- 185
L ++ H N+V L+ C T+ R Y+ E L L T EI
Sbjct: 69 ILQLLKHENVVNLIEICRTK-ASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIK 127
Query: 186 --ILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVST 243
+ GL Y+H ++++RD K +NVL+ + KL+DFGLAR ++ +
Sbjct: 128 RVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNR 184
Query: 244 AV--VGTYGYAAPEYI--ETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEW 299
V T Y PE + E + D+W G ++ E+ T +++ N EQ L
Sbjct: 185 YXNRVVTLWYRPPELLLGERDY-GPPIDLWGAGCIMAEMWTRSPIMQGN---TEQHQLAL 240
Query: 300 VKQF 303
+ Q
Sbjct: 241 ISQL 244
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 121/295 (41%), Gaps = 44/295 (14%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVS-HPNLVK 138
+ EGGF VY+ G A+K+L ++ + ++ + EV F+ +S HPN+V+
Sbjct: 36 LAEGGFAFVYEA-----QDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQ 90
Query: 139 LLGYCSTEDERG----IQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLA 194
S E + LL+ E + +E ++ L T L+I +
Sbjct: 91 FCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQ 150
Query: 195 YLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLA---REGPTGDHTHVSTAVV----- 246
++H + +I+RD K N+LL KL DFG A P + A+V
Sbjct: 151 HMHRQ-KPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEIT 209
Query: 247 --GTYGYAAPEYIETGH---LKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVK 301
T Y PE I+ + + DIW+ G +LY + R P + L V
Sbjct: 210 RNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCF------RQHPFEDGAKLRIVN 263
Query: 302 QFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLK 356
K+S+ P QY++ L L+ NPEER ++ +VV L+
Sbjct: 264 ------GKYSI---PPHDTQYTV-----FHSLIRAMLQVNPEERLSIAEVVHQLQ 304
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 99/235 (42%), Gaps = 32/235 (13%)
Query: 124 EVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTR- 182
EV L + HPN++ L E +L+ E + L D L + T T+
Sbjct: 79 EVNILREIRHPNIITLHDIF----ENKTDVVLILELVSGGELFDFLAEKESLTEDEATQF 134
Query: 183 LEIILGAAEGLAYLHEGLEIQVIYRDFKTSNV-LLDGNF---KPKLSDFGLAREGPTGDH 238
L+ IL +G+ YLH ++ + D K N+ LLD N + KL DFG+A + G+
Sbjct: 135 LKQIL---DGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNE 188
Query: 239 THVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLE 298
+ GT + APE + L ++D+WS GV+ Y +L+G P + + E
Sbjct: 189 F---KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGA------SPFLGETKQE 239
Query: 299 WVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVE 353
+ A F +Y N + L K+P+ R + Q +E
Sbjct: 240 TLTNISAVNYDFD--------EEYFSNTSELAKDFIRRLLVKDPKRRMXIAQSLE 286
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 88/207 (42%), Gaps = 43/207 (20%)
Query: 154 LLVYEYMPNRSLEDRLFSRAQPTLPWKTR----LEIILGAAEGLAYLHEGLEIQVIYRDF 209
+L+ EY +FS P L + +I EG+ YLH+ +++ D
Sbjct: 105 ILILEYAAG----GEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQN---NIVHLDL 157
Query: 210 KTSNVLLDGNF---KPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQS 266
K N+LL + K+ DFG++R+ H ++GT Y APE + + + +
Sbjct: 158 KPQNILLSSIYPLGDIKIVDFGMSRKI---GHACELREIMGTPEYLAPEILNYDPITTAT 214
Query: 267 DIWSFGVVLYEILTGRR--VLERNRPTMEQKLLEWVKQFPADGKKFSMMIDPRLRNQYSI 324
D+W+ G++ Y +LT V E N+ T + Q D YS
Sbjct: 215 DMWNIGIIAYMLLTHTSPFVGEDNQETYLN-----ISQVNVD---------------YSE 254
Query: 325 NAARRVAKLADN----CLKKNPEERPT 347
V++LA + L KNPE+RPT
Sbjct: 255 ETFSSVSQLATDFIQSLLVKNPEKRPT 281
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 120/292 (41%), Gaps = 53/292 (18%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGE--PLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLV 137
+G+G F ++KG R + G+ V +K L+ + + + +SH +LV
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 138 KLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLH 197
G C DE +LV E++ SL D + + + +LE+ A + +L
Sbjct: 76 LNYGVCVCGDEN----ILVQEFVKFGSL-DTYLKKNKNCINILWKLEVAKQLAAAMHFLE 130
Query: 198 EGLEIQVIYRDFKTSNVLL-------DGNFKP--KLSDFGLAREGPTGDHTHVSTAVVGT 248
E +I+ + N+LL GN P KLSD G++ D +
Sbjct: 131 EN---TLIHGNVCAKNILLIREEDRKTGN-PPFIKLSDPGISITVLPKD------ILQER 180
Query: 249 YGYAAPEYIET-GHLKSQSDIWSFGVVLYEILTGRRVLERNRP----TMEQKLLEWVKQF 303
+ PE IE +L +D WSFG L+EI +G ++P ++KL QF
Sbjct: 181 IPWVPPECIENPKNLNLATDKWSFGTTLWEICSGG-----DKPLSALDSQRKL-----QF 230
Query: 304 PADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESL 355
D R+Q A +A L +NC+ P+ RP+ ++ L
Sbjct: 231 YED------------RHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDL 270
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 110/254 (43%), Gaps = 51/254 (20%)
Query: 63 DMQELREA----TNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKL--NNHGLQ 116
D+++L EA +N F KIGEG F SVY T + G E +A+K L +H +
Sbjct: 8 DIEKLYEAVPQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEK--IALKHLIPTSHPI- 64
Query: 117 GHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPT 176
+ AE+Q L V + V + YC +++ + + Y+ + S D L S
Sbjct: 65 ---RIAAELQCLTVAGGQDNVMGVKYCFRKNDHVV---IAMPYLEHESFLDILNS----- 113
Query: 177 LPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKP-KLSDFGLAR---- 231
L ++ E +L + L +H + +++RD K SN L + K L DFGLA+
Sbjct: 114 LSFQEVREYMLNLFKALKRIH---QFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHD 170
Query: 232 -------------EGPTGDHTHVSTAV---------VGTYGYAAPEYI-ETGHLKSQSDI 268
+ S + GT G+ APE + + + + D+
Sbjct: 171 TKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDM 230
Query: 269 WSFGVVLYEILTGR 282
WS GV+ +L+GR
Sbjct: 231 WSAGVIFLSLLSGR 244
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 6/86 (6%)
Query: 201 EIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIET- 259
++ ++RD K NVLLD N +L+DFG + D T S+ VGT Y +PE ++
Sbjct: 193 QLHYVHRDIKPDNVLLDVNGHIRLADFGSCLK-MNDDGTVQSSVAVGTPDYISPEILQAM 251
Query: 260 ----GHLKSQSDIWSFGVVLYEILTG 281
G + D WS GV +YE+L G
Sbjct: 252 EDGMGKYGPECDWWSLGVCMYEMLYG 277
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 84/196 (42%), Gaps = 32/196 (16%)
Query: 176 TLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPT 235
T+P +I + + L +LH L VI+RD K SNVL++ + K DFG++ G
Sbjct: 132 TIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKXCDFGIS--GYL 187
Query: 236 GDHTHVSTAVVGTYGYAAPEYI-----ETGHLKSQSDIWSFGVVLYEILTGRRVLER-NR 289
D G Y APE I + G+ +SDIWS G+ E+ R +
Sbjct: 188 VDDV-AKDIDAGCKPYXAPERINPELNQKGY-SVKSDIWSLGITXIELAILRFPYDSWGT 245
Query: 290 P--TMEQKLLEWVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPT 347
P ++Q + E Q PAD KFS CLKKN +ERPT
Sbjct: 246 PFQQLKQVVEEPSPQLPAD--KFSA----------------EFVDFTSQCLKKNSKERPT 287
Query: 348 MNQVVESLKLAVQESE 363
++ + + ES+
Sbjct: 288 YPELXQHPFFTLHESK 303
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 95/224 (42%), Gaps = 35/224 (15%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNN--HGLQGHKQWLAEVQFLGVVSHPNLV 137
IG G +G VY + + VA+KK+N L K+ L E+ L + ++
Sbjct: 34 IGRGSYGYVYLAYDKNTEKN-----VAIKKVNRMFEDLIDCKRILREITILNRLKSDYII 88
Query: 138 KLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIIL-GAAEGLAYL 196
+L +D L + + + L+ +LF P + ++ IL G ++
Sbjct: 89 RLYDLIIPDDLLKFDELYIVLEIADSDLK-KLFK--TPIFLTEEHIKTILYNLLLGENFI 145
Query: 197 HEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVS-------------- 242
HE +I+RD K +N LL+ + K+ DFGLAR + T++
Sbjct: 146 HES---GIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNK 202
Query: 243 ------TAVVGTYGYAAPEYIETGHLKSQS-DIWSFGVVLYEIL 279
T+ V T Y APE I ++S DIWS G + E+L
Sbjct: 203 NLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELL 246
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 56/114 (49%), Gaps = 4/114 (3%)
Query: 192 GLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGY 251
L YLH +I+RD K N+LL+ + +++DFG A+ + + VGT Y
Sbjct: 145 ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQY 201
Query: 252 AAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLER-NRPTMEQKLLEWVKQFP 304
+PE + SD+W+ G ++Y+++ G N + QK+++ FP
Sbjct: 202 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP 255
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 6/86 (6%)
Query: 201 EIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIET- 259
++ ++RD K NVLLD N +L+DFG + D T S+ VGT Y +PE ++
Sbjct: 209 QLHYVHRDIKPDNVLLDVNGHIRLADFGSCLK-MNDDGTVQSSVAVGTPDYISPEILQAM 267
Query: 260 ----GHLKSQSDIWSFGVVLYEILTG 281
G + D WS GV +YE+L G
Sbjct: 268 EDGMGKYGPECDWWSLGVCMYEMLYG 293
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 95/231 (41%), Gaps = 44/231 (19%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNN--HGLQGHKQWLAEVQFLGVVSHPNLV 137
IG G +G V + + E VVA+KK+ L K+ L E+ L ++H ++V
Sbjct: 61 IGTGSYGHVCEAY-----DKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVV 115
Query: 138 KLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEI---ILGAAEGLA 194
K+L +D L V + D F + T + T L I + G+
Sbjct: 116 KVLDIVIPKDVEKFDELYVV-----LEIADSDFKKLFRTPVYLTELHIKTLLYNLLVGVK 170
Query: 195 YLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLARE-------------GPTGDHTHV 241
Y+H +++RD K +N L++ + K+ DFGLAR P D ++
Sbjct: 171 YVHSA---GILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNL 227
Query: 242 S------------TAVVGTYGYAAPEYIETGHLKSQS-DIWSFGVVLYEIL 279
T V T Y APE I +++ D+WS G + E+L
Sbjct: 228 VTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELL 278
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 55/114 (48%), Gaps = 4/114 (3%)
Query: 192 GLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGY 251
L YLH +I+RD K N+LL+ + +++DFG A+ + VGT Y
Sbjct: 122 ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 178
Query: 252 AAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLER-NRPTMEQKLLEWVKQFP 304
+PE + SD+W+ G ++Y+++ G N + QK+++ FP
Sbjct: 179 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP 232
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 90/200 (45%), Gaps = 21/200 (10%)
Query: 105 VAVKKLNN-HGLQGH-KQWLAEVQFLGVVSHPNLVKLLGYCSTED--ERGIQRLLVYEYM 160
VA+KKL+ Q H K+ E+ + V+H N++ LL + + E +V E M
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 161 PNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNF 220
+ L Q L + ++ G+ +LH +I+RD K SN+++ +
Sbjct: 112 -----DANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDC 163
Query: 221 KPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILT 280
K+ DFGLAR G + VV Y Y APE I K D+WS G ++ E++
Sbjct: 164 TLKILDFGLARTA--GTSFMMEPEVVTRY-YRAPEVILGMGYKENVDLWSVGCIMGEMVC 220
Query: 281 ------GRRVLERNRPTMEQ 294
GR +++ +EQ
Sbjct: 221 HKILFPGRDYIDQWNKVIEQ 240
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 71/171 (41%), Gaps = 26/171 (15%)
Query: 189 AAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGT 248
A G+ +L + I+RD N+LL N K+ DFGLAR+
Sbjct: 208 VARGMEFLSSR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLP 264
Query: 249 YGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGK 308
+ APE I ++SD+WS+GV+L+EI + + P G
Sbjct: 265 LKWMAPESIFDKIYSTKSDVWSYGVLLWEIFS-------------------LGGSPYPGV 305
Query: 309 KFSMMIDPRLRNQYSINAAR----RVAKLADNCLKKNPEERPTMNQVVESL 355
+ RLR + A + ++ +C ++P+ERP ++VE L
Sbjct: 306 QMDEDFCSRLREGMRMRAPEYSTPEIYQIMLDCWHRDPKERPRFAELVEKL 356
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 55/114 (48%), Gaps = 4/114 (3%)
Query: 192 GLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGY 251
L YLH +I+RD K N+LL+ + +++DFG A+ + VGT Y
Sbjct: 119 ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 175
Query: 252 AAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLER-NRPTMEQKLLEWVKQFP 304
+PE + SD+W+ G ++Y+++ G N + QK+++ FP
Sbjct: 176 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP 229
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 55/114 (48%), Gaps = 4/114 (3%)
Query: 192 GLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGY 251
L YLH +I+RD K N+LL+ + +++DFG A+ + VGT Y
Sbjct: 120 ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 176
Query: 252 AAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLER-NRPTMEQKLLEWVKQFP 304
+PE + SD+W+ G ++Y+++ G N + QK+++ FP
Sbjct: 177 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP 230
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 120/292 (41%), Gaps = 53/292 (18%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGE--PLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLV 137
+G+G F ++KG R + G+ V +K L+ + + + +SH +LV
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 138 KLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLH 197
G C DE +LV E++ SL D + + + +LE+ A + +L
Sbjct: 76 LNYGVCFCGDEN----ILVQEFVKFGSL-DTYLKKNKNCINILWKLEVAKQLAWAMHFLE 130
Query: 198 EGLEIQVIYRDFKTSNVLL-------DGNFKP--KLSDFGLAREGPTGDHTHVSTAVVGT 248
E +I+ + N+LL GN P KLSD G++ D +
Sbjct: 131 EN---TLIHGNVCAKNILLIREEDRKTGN-PPFIKLSDPGISITVLPKD------ILQER 180
Query: 249 YGYAAPEYIET-GHLKSQSDIWSFGVVLYEILTGRRVLERNRP----TMEQKLLEWVKQF 303
+ PE IE +L +D WSFG L+EI +G ++P ++KL QF
Sbjct: 181 IPWVPPECIENPKNLNLATDKWSFGTTLWEICSGG-----DKPLSALDSQRKL-----QF 230
Query: 304 PADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESL 355
D R+Q A +A L +NC+ P+ RP+ ++ L
Sbjct: 231 YED------------RHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDL 270
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 56/114 (49%), Gaps = 4/114 (3%)
Query: 192 GLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGY 251
L YLH +I+RD K N+LL+ + +++DFG A+ + + VGT Y
Sbjct: 141 ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQY 197
Query: 252 AAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLER-NRPTMEQKLLEWVKQFP 304
+PE + SD+W+ G ++Y+++ G N + QK+++ FP
Sbjct: 198 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP 251
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 55/114 (48%), Gaps = 4/114 (3%)
Query: 192 GLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGY 251
L YLH +I+RD K N+LL+ + +++DFG A+ + VGT Y
Sbjct: 121 ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 177
Query: 252 AAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLER-NRPTMEQKLLEWVKQFP 304
+PE + SD+W+ G ++Y+++ G N + QK+++ FP
Sbjct: 178 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP 231
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 96/235 (40%), Gaps = 28/235 (11%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGH-----------KQWLAEVQFL 128
I G +G+V G +D G P VA+K++ N G K+ L E++ L
Sbjct: 30 ISSGSYGAVCAG----VDSEGIP--VAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLL 83
Query: 129 GVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILG 188
HPN++ L +E + +L + + L + + P + +
Sbjct: 84 NHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQY-FMYH 142
Query: 189 AAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGT 248
GL LHE V++RD N+LL N + DF LARE T D T V
Sbjct: 143 ILLGLHVLHEA---GVVHRDLHPGNILLADNNDITICDFNLARED-TADAN--KTHYVTH 196
Query: 249 YGYAAPEYI-ETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQ--KLLEWV 300
Y APE + + D+WS G V+ E+ R+ L R Q K++E V
Sbjct: 197 RWYRAPELVMQFKGFTKLVDMWSAGCVMAEMF-NRKALFRGSTFYNQLNKIVEVV 250
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 55/114 (48%), Gaps = 4/114 (3%)
Query: 192 GLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGY 251
L YLH +I+RD K N+LL+ + +++DFG A+ + VGT Y
Sbjct: 144 ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 200
Query: 252 AAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLER-NRPTMEQKLLEWVKQFP 304
+PE + SD+W+ G ++Y+++ G N + QK+++ FP
Sbjct: 201 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP 254
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 55/114 (48%), Gaps = 4/114 (3%)
Query: 192 GLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGY 251
L YLH +I+RD K N+LL+ + +++DFG A+ + VGT Y
Sbjct: 142 ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 198
Query: 252 AAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLER-NRPTMEQKLLEWVKQFP 304
+PE + SD+W+ G ++Y+++ G N + QK+++ FP
Sbjct: 199 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP 252
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 55/114 (48%), Gaps = 4/114 (3%)
Query: 192 GLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGY 251
L YLH +I+RD K N+LL+ + +++DFG A+ + VGT Y
Sbjct: 144 ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 200
Query: 252 AAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLER-NRPTMEQKLLEWVKQFP 304
+PE + SD+W+ G ++Y+++ G N + QK+++ FP
Sbjct: 201 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP 254
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 98/219 (44%), Gaps = 33/219 (15%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG-LQGHKQWLAEVQFLGVVSHPNLVK 138
+G+G +V++G + + A+K NN L+ + E + L ++H N+VK
Sbjct: 17 LGQGATANVFRGRHKKTGD-----LFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVK 71
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPT----LPWKTRLEIILGAAEGLA 194
L + E+ ++L+ E+ P SL L +P+ LP L ++ G+
Sbjct: 72 L--FAIEEETTTRHKVLIMEFCPCGSLYTVL---EEPSNAYGLPESEFLIVLRDVVGGMN 126
Query: 195 YLHEGLEIQVIYRDFKTSNVLL----DGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYG 250
+L E +++R+ K N++ DG KL+DFG ARE D VS + GT
Sbjct: 127 HLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARE-LEDDEQFVS--LYGTEE 180
Query: 251 YAAPEYIETGHLK--------SQSDIWSFGVVLYEILTG 281
Y P+ E L+ + D+WS GV Y TG
Sbjct: 181 YLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATG 219
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 55/114 (48%), Gaps = 4/114 (3%)
Query: 192 GLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGY 251
L YLH +I+RD K N+LL+ + +++DFG A+ + VGT Y
Sbjct: 145 ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 201
Query: 252 AAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLER-NRPTMEQKLLEWVKQFP 304
+PE + SD+W+ G ++Y+++ G N + QK+++ FP
Sbjct: 202 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP 255
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 55/114 (48%), Gaps = 4/114 (3%)
Query: 192 GLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGY 251
L YLH +I+RD K N+LL+ + +++DFG A+ + VGT Y
Sbjct: 142 ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 198
Query: 252 AAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLER-NRPTMEQKLLEWVKQFP 304
+PE + SD+W+ G ++Y+++ G N + QK+++ FP
Sbjct: 199 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP 252
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 96/235 (40%), Gaps = 28/235 (11%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGH-----------KQWLAEVQFL 128
I G +G+V G +D G P VA+K++ N G K+ L E++ L
Sbjct: 30 ISSGSYGAVCAG----VDSEGIP--VAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLL 83
Query: 129 GVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILG 188
HPN++ L +E + +L + + L + + P + +
Sbjct: 84 NHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQY-FMYH 142
Query: 189 AAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGT 248
GL LHE V++RD N+LL N + DF LARE T D T V
Sbjct: 143 ILLGLHVLHEA---GVVHRDLHPGNILLADNNDITICDFNLARED-TADAN--KTHYVTH 196
Query: 249 YGYAAPEYI-ETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQ--KLLEWV 300
Y APE + + D+WS G V+ E+ R+ L R Q K++E V
Sbjct: 197 RWYRAPELVMQFKGFTKLVDMWSAGCVMAEMF-NRKALFRGSTFYNQLNKIVEVV 250
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 67/155 (43%), Gaps = 21/155 (13%)
Query: 133 HPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRL-----FSRAQPTLPWKTRLEIIL 187
HPN+V+ T I V EY L +R+ FS + ++ +
Sbjct: 74 HPNIVRFKEVILTPTHLAI----VMEYASGGELFERICNAGRFSEDEARFFFQQLIS--- 126
Query: 188 GAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVG 247
G++Y H +QV +RD K N LLDG+ P+L + H+ + VG
Sbjct: 127 ----GVSYCHA---MQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQ-PKSTVG 178
Query: 248 TYGYAAPEYIETGHLKSQ-SDIWSFGVVLYEILTG 281
T Y APE + + +D+WS GV LY +L G
Sbjct: 179 TPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 55/114 (48%), Gaps = 4/114 (3%)
Query: 192 GLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGY 251
L YLH +I+RD K N+LL+ + +++DFG A+ + VGT Y
Sbjct: 142 ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 198
Query: 252 AAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLER-NRPTMEQKLLEWVKQFP 304
+PE + SD+W+ G ++Y+++ G N + QK+++ FP
Sbjct: 199 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP 252
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 55/114 (48%), Gaps = 4/114 (3%)
Query: 192 GLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGY 251
L YLH +I+RD K N+LL+ + +++DFG A+ + VGT Y
Sbjct: 144 ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 200
Query: 252 AAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLER-NRPTMEQKLLEWVKQFP 304
+PE + SD+W+ G ++Y+++ G N + QK+++ FP
Sbjct: 201 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP 254
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 55/114 (48%), Gaps = 4/114 (3%)
Query: 192 GLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGY 251
L YLH +I+RD K N+LL+ + +++DFG A+ + VGT Y
Sbjct: 126 ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 182
Query: 252 AAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLER-NRPTMEQKLLEWVKQFP 304
+PE + SD+W+ G ++Y+++ G N + QK+++ FP
Sbjct: 183 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP 236
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 106/230 (46%), Gaps = 47/230 (20%)
Query: 80 IGEGGFGSV-YKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVS-HPNLV 137
+G G G+V ++G+ + G P VAVK++ + L E++ L HPN++
Sbjct: 23 LGYGSSGTVVFQGSFQ-----GRP--VAVKRM---LIDFCDIALMEIKLLTESDDHPNVI 72
Query: 138 KLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLE-----IILGAAEG 192
+ YCS +R L + + N +L+D + S+ K + E ++ A G
Sbjct: 73 RY--YCSETTDRF---LYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASG 127
Query: 193 LAYLHEGLEIQVIYRDFKTSNVLLDG-------------NFKPKLSDFGLAREGPTGDHT 239
+A+LH +++I+RD K N+L+ N + +SDFGL ++ +G +
Sbjct: 128 VAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSS 184
Query: 240 HVSTA--VVGTYGYAAPEYIETGH-------LKSQSDIWSFGVVLYEILT 280
+ GT G+ APE +E + L DI+S G V Y IL+
Sbjct: 185 FRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILS 234
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 55/114 (48%), Gaps = 4/114 (3%)
Query: 192 GLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGY 251
L YLH +I+RD K N+LL+ + +++DFG A+ + VGT Y
Sbjct: 141 ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 197
Query: 252 AAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLER-NRPTMEQKLLEWVKQFP 304
+PE + SD+W+ G ++Y+++ G N + QK+++ FP
Sbjct: 198 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP 251
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 46/90 (51%), Gaps = 3/90 (3%)
Query: 192 GLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGY 251
L YLH +I+RD K N+LL+ + +++DFG A+ + VGT Y
Sbjct: 144 ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 200
Query: 252 AAPEYIETGHLKSQSDIWSFGVVLYEILTG 281
+PE + SD+W+ G ++Y+++ G
Sbjct: 201 VSPELLTEKSAXKSSDLWALGCIIYQLVAG 230
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 103/226 (45%), Gaps = 43/226 (19%)
Query: 80 IGEGGFGSV-YKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVS-HPNLV 137
+G G G+V ++G+ + G P VAVK++ + L E++ L HPN++
Sbjct: 41 LGYGSSGTVVFQGSFQ-----GRP--VAVKRM---LIDFCDIALMEIKLLTESDDHPNVI 90
Query: 138 KLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLE-----IILGAAEG 192
+ YCS +R L + + N +L+D + S+ K + E ++ A G
Sbjct: 91 RY--YCSETTDRF---LYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASG 145
Query: 193 LAYLHEGLEIQVIYRDFKTSNVLLDG-------------NFKPKLSDFGLAREGPTGDHT 239
+A+LH +++I+RD K N+L+ N + +SDFGL ++ +G
Sbjct: 146 VAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXX 202
Query: 240 HVSTA--VVGTYGYAAPEYIETG---HLKSQSDIWSFGVVLYEILT 280
GT G+ APE +E L DI+S G V Y IL+
Sbjct: 203 FRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILS 248
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 46/90 (51%), Gaps = 3/90 (3%)
Query: 192 GLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGY 251
L YLH +I+RD K N+LL+ + +++DFG A+ + VGT Y
Sbjct: 144 ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 200
Query: 252 AAPEYIETGHLKSQSDIWSFGVVLYEILTG 281
+PE + SD+W+ G ++Y+++ G
Sbjct: 201 VSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 103/226 (45%), Gaps = 43/226 (19%)
Query: 80 IGEGGFGSV-YKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVS-HPNLV 137
+G G G+V ++G+ + G P VAVK++ + L E++ L HPN++
Sbjct: 41 LGYGSSGTVVFQGSFQ-----GRP--VAVKRM---LIDFCDIALMEIKLLTESDDHPNVI 90
Query: 138 KLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLE-----IILGAAEG 192
+ YCS +R L + + N +L+D + S+ K + E ++ A G
Sbjct: 91 RY--YCSETTDRF---LYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASG 145
Query: 193 LAYLHEGLEIQVIYRDFKTSNVLLDG-------------NFKPKLSDFGLAREGPTGDHT 239
+A+LH +++I+RD K N+L+ N + +SDFGL ++ +G
Sbjct: 146 VAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXX 202
Query: 240 HVSTA--VVGTYGYAAPEYIETG---HLKSQSDIWSFGVVLYEILT 280
GT G+ APE +E L DI+S G V Y IL+
Sbjct: 203 FRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILS 248
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 77/198 (38%), Gaps = 37/198 (18%)
Query: 133 HPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRL-----FSRAQPTLPWKTRLEIIL 187
HPN+V+ T I V EY L +R+ FS + ++ +
Sbjct: 74 HPNIVRFKEVILTPTHLAI----VMEYASGGELFERICNAGRFSEDEARFFFQQLIS--- 126
Query: 188 GAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVG 247
G++Y H +QV +RD K N LLDG+ P+L + H+ VG
Sbjct: 127 ----GVSYCHA---MQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQ-PKDTVG 178
Query: 248 TYGYAAPEYIETGHLKSQ-SDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPAD 306
T Y APE + + +D+WS GV LY +L G E P +
Sbjct: 179 TPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFED----------------PEE 222
Query: 307 GKKFSMMIDPRLRNQYSI 324
K F I L QY+I
Sbjct: 223 PKNFRKTIHRILNVQYAI 240
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 72/165 (43%), Gaps = 19/165 (11%)
Query: 123 AEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTR 182
E++ L ++HP ++K+ + ED +V E M L D++ + L T
Sbjct: 64 TEIEILKKLNHPCIIKIKNFFDAED-----YYIVLELMEGGELFDKVVGNKR--LKEATC 116
Query: 183 LEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDG---NFKPKLSDFGLAREGPTGDHT 239
+ YLHE +I+RD K NVLL + K++DFG ++ T
Sbjct: 117 KLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSK---ILGET 170
Query: 240 HVSTAVVGTYGYAAPEY---IETGHLKSQSDIWSFGVVLYEILTG 281
+ + GT Y APE + T D WS GV+L+ L+G
Sbjct: 171 SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 76/181 (41%), Gaps = 28/181 (15%)
Query: 189 AAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLARE-GPTGDHTHVSTAVVG 247
A+G+ +L + I+RD N+LL K+ DFGLAR+ D+ A +
Sbjct: 202 VAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL- 257
Query: 248 TYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADG 307
+ APE I QSD+WSFGV+L+EI + + P G
Sbjct: 258 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-------------------LGASPYPG 298
Query: 308 KKFSMMIDPRLRNQYSINA----ARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQESE 363
K RL+ + A + + +C P +RPT +++VE L +Q +
Sbjct: 299 VKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 358
Query: 364 Q 364
Q
Sbjct: 359 Q 359
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 72/165 (43%), Gaps = 19/165 (11%)
Query: 123 AEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTR 182
E++ L ++HP ++K+ + ED +V E M L D++ + L T
Sbjct: 64 TEIEILKKLNHPCIIKIKNFFDAED-----YYIVLELMEGGELFDKVVGNKR--LKEATC 116
Query: 183 LEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDG---NFKPKLSDFGLAREGPTGDHT 239
+ YLHE +I+RD K NVLL + K++DFG ++ T
Sbjct: 117 KLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSK---ILGET 170
Query: 240 HVSTAVVGTYGYAAPEY---IETGHLKSQSDIWSFGVVLYEILTG 281
+ + GT Y APE + T D WS GV+L+ L+G
Sbjct: 171 SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 72/165 (43%), Gaps = 19/165 (11%)
Query: 123 AEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTR 182
E++ L ++HP ++K+ + ED +V E M L D++ + L T
Sbjct: 64 TEIEILKKLNHPCIIKIKNFFDAED-----YYIVLELMEGGELFDKVVGNKR--LKEATC 116
Query: 183 LEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDG---NFKPKLSDFGLAREGPTGDHT 239
+ YLHE +I+RD K NVLL + K++DFG ++ T
Sbjct: 117 KLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSK---ILGET 170
Query: 240 HVSTAVVGTYGYAAPEY---IETGHLKSQSDIWSFGVVLYEILTG 281
+ + GT Y APE + T D WS GV+L+ L+G
Sbjct: 171 SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 72/165 (43%), Gaps = 19/165 (11%)
Query: 123 AEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTR 182
E++ L ++HP ++K+ + ED +V E M L D++ + L T
Sbjct: 63 TEIEILKKLNHPCIIKIKNFFDAED-----YYIVLELMEGGELFDKVVGNKR--LKEATC 115
Query: 183 LEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDG---NFKPKLSDFGLAREGPTGDHT 239
+ YLHE +I+RD K NVLL + K++DFG ++ T
Sbjct: 116 KLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSK---ILGET 169
Query: 240 HVSTAVVGTYGYAAPEY---IETGHLKSQSDIWSFGVVLYEILTG 281
+ + GT Y APE + T D WS GV+L+ L+G
Sbjct: 170 SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 214
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 76/181 (41%), Gaps = 28/181 (15%)
Query: 189 AAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLARE-GPTGDHTHVSTAVVG 247
A+G+ +L + I+RD N+LL K+ DFGLAR+ D+ A +
Sbjct: 207 VAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL- 262
Query: 248 TYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADG 307
+ APE I QSD+WSFGV+L+EI + + P G
Sbjct: 263 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-------------------LGASPYPG 303
Query: 308 KKFSMMIDPRLRNQYSINA----ARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQESE 363
K RL+ + A + + +C P +RPT +++VE L +Q +
Sbjct: 304 VKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 363
Query: 364 Q 364
Q
Sbjct: 364 Q 364
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 72/165 (43%), Gaps = 19/165 (11%)
Query: 123 AEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTR 182
E++ L ++HP ++K+ + ED +V E M L D++ + L T
Sbjct: 70 TEIEILKKLNHPCIIKIKNFFDAED-----YYIVLELMEGGELFDKVVGNKR--LKEATC 122
Query: 183 LEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDG---NFKPKLSDFGLAREGPTGDHT 239
+ YLHE +I+RD K NVLL + K++DFG ++ T
Sbjct: 123 KLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSK---ILGET 176
Query: 240 HVSTAVVGTYGYAAPEY---IETGHLKSQSDIWSFGVVLYEILTG 281
+ + GT Y APE + T D WS GV+L+ L+G
Sbjct: 177 SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 221
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 117/283 (41%), Gaps = 53/283 (18%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVK-----KLNNHG-LQGHKQWLAEVQFLGVVS- 132
+G GGFGSVY G IR D L VA+K ++++ G L + EV L VS
Sbjct: 16 LGSGGFGSVYSG-IRVSDN----LPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 70
Query: 133 -HPNLVKLLGYCSTEDERGIQRLLVYEYM-PNRSLEDRLFSRAQPTLPWKTRLEIILGAA 190
+++LL + ER +L+ E M P + L D + R L +
Sbjct: 71 GFSGVIRLLDWF----ERPDSFVLILERMEPVQDLFDFITERG--ALQEELARSFFWQVL 124
Query: 191 EGLAYLHEGLEIQVIYRDFKTSNVLLDGN-FKPKLSDFGLAREGPTGDHTHVSTAVVGTY 249
E + + H V++RD K N+L+D N + KL DFG G T V T GT
Sbjct: 125 EAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT-VYTDFDGTR 177
Query: 250 GYAAPEYIETGHLKSQS-DIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGK 308
Y+ PE+I +S +WS G++LY+++ G E + + G+
Sbjct: 178 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR-------------GQ 224
Query: 309 KFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQV 351
F + + L CL P +RPT ++
Sbjct: 225 VF-----------FRQRVSSECQHLIRWCLALRPSDRPTFEEI 256
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 76/181 (41%), Gaps = 28/181 (15%)
Query: 189 AAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLARE-GPTGDHTHVSTAVVG 247
A+G+ +L + I+RD N+LL K+ DFGLAR+ D+ A +
Sbjct: 209 VAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL- 264
Query: 248 TYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADG 307
+ APE I QSD+WSFGV+L+EI + + P G
Sbjct: 265 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-------------------LGASPYPG 305
Query: 308 KKFSMMIDPRLRNQYSINA----ARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQESE 363
K RL+ + A + + +C P +RPT +++VE L +Q +
Sbjct: 306 VKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 365
Query: 364 Q 364
Q
Sbjct: 366 Q 366
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 104/230 (45%), Gaps = 47/230 (20%)
Query: 80 IGEGGFGSV-YKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVS-HPNLV 137
+G G G+V ++G+ + G P VAVK++ + L E++ L HPN++
Sbjct: 23 LGYGSSGTVVFQGSFQ-----GRP--VAVKRM---LIDFCDIALMEIKLLTESDDHPNVI 72
Query: 138 KLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLE-----IILGAAEG 192
+ YCS +R L + + N +L+D + S+ K + E ++ A G
Sbjct: 73 RY--YCSETTDRF---LYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASG 127
Query: 193 LAYLHEGLEIQVIYRDFKTSNVLLDG-------------NFKPKLSDFGLAREGPTGDHT 239
+A+LH +++I+RD K N+L+ N + +SDFGL ++ +G
Sbjct: 128 VAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXX 184
Query: 240 HVSTA--VVGTYGYAAPEYIETGH-------LKSQSDIWSFGVVLYEILT 280
GT G+ APE +E + L DI+S G V Y IL+
Sbjct: 185 FRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILS 234
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 72/165 (43%), Gaps = 19/165 (11%)
Query: 123 AEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTR 182
E++ L ++HP ++K+ + ED +V E M L D++ + L T
Sbjct: 189 TEIEILKKLNHPCIIKIKNFFDAED-----YYIVLELMEGGELFDKVVGNKR--LKEATC 241
Query: 183 LEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDG---NFKPKLSDFGLAREGPTGDHT 239
+ YLHE +I+RD K NVLL + K++DFG ++ T
Sbjct: 242 KLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSK---ILGET 295
Query: 240 HVSTAVVGTYGYAAPEY---IETGHLKSQSDIWSFGVVLYEILTG 281
+ + GT Y APE + T D WS GV+L+ L+G
Sbjct: 296 SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 340
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 96/219 (43%), Gaps = 33/219 (15%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG-LQGHKQWLAEVQFLGVVSHPNLVK 138
+G+G +V++G + + A+K NN L+ + E + L ++H N+VK
Sbjct: 17 LGQGATANVFRGRHKKTGD-----LFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVK 71
Query: 139 LLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPT----LPWKTRLEIILGAAEGLA 194
L + E+ ++L+ E+ P SL L +P+ LP L ++ G+
Sbjct: 72 L--FAIEEETTTRHKVLIMEFCPCGSLYTVL---EEPSNAYGLPESEFLIVLRDVVGGMN 126
Query: 195 YLHEGLEIQVIYRDFKTSNVLL----DGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYG 250
+L E +++R+ K N++ DG KL+DFG ARE + + GT
Sbjct: 127 HLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQF---VXLYGTEE 180
Query: 251 YAAPEYIETGHLK--------SQSDIWSFGVVLYEILTG 281
Y P+ E L+ + D+WS GV Y TG
Sbjct: 181 YLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATG 219
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 72/165 (43%), Gaps = 19/165 (11%)
Query: 123 AEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTR 182
E++ L ++HP ++K+ + ED +V E M L D++ + L T
Sbjct: 203 TEIEILKKLNHPCIIKIKNFFDAED-----YYIVLELMEGGELFDKVVGNKR--LKEATC 255
Query: 183 LEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDG---NFKPKLSDFGLAREGPTGDHT 239
+ YLHE +I+RD K NVLL + K++DFG ++ T
Sbjct: 256 KLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSK---ILGET 309
Query: 240 HVSTAVVGTYGYAAPEY---IETGHLKSQSDIWSFGVVLYEILTG 281
+ + GT Y APE + T D WS GV+L+ L+G
Sbjct: 310 SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 354
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 71/153 (46%), Gaps = 15/153 (9%)
Query: 133 HPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEG 192
HPN++ L + G +V E M L D++ Q + ++ +
Sbjct: 75 HPNIITL----KDVYDDGKYVYVVTELMKGGELLDKILR--QKFFSEREASAVLFTITKT 128
Query: 193 LAYLHEGLEIQVIYRDFKTSNVL-LDGNFKP---KLSDFGLAREGPTGDHTHVSTAVVGT 248
+ YLH V++RD K SN+L +D + P ++ DFG A++ + ++ T
Sbjct: 129 VEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCY--T 183
Query: 249 YGYAAPEYIETGHLKSQSDIWSFGVVLYEILTG 281
+ APE +E + DIWS GV+LY +LTG
Sbjct: 184 ANFVAPEVLERQGYDAACDIWSLGVLLYTMLTG 216
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 72/162 (44%), Gaps = 16/162 (9%)
Query: 124 EVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRL 183
EV L V H N++ L E +L+ E + L D F + +L +
Sbjct: 65 EVSILRQVLHHNVITLHDVY----ENRTDVVLILELVSGGELFD--FLAQKESLSEEEAT 118
Query: 184 EIILGAAEGLAYLHEGLEIQVIYRDFKTSNV-LLDGNF---KPKLSDFGLAREGPTGDHT 239
I +G+ YLH ++ + D K N+ LLD N KL DFGLA E G
Sbjct: 119 SFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF 175
Query: 240 HVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTG 281
+ GT + APE + L ++D+WS GV+ Y +L+G
Sbjct: 176 ---KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 72/162 (44%), Gaps = 16/162 (9%)
Query: 124 EVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRL 183
EV L V H N++ L E +L+ E + L D F + +L +
Sbjct: 65 EVSILRQVLHHNVITLHDVY----ENRTDVVLILELVSGGELFD--FLAQKESLSEEEAT 118
Query: 184 EIILGAAEGLAYLHEGLEIQVIYRDFKTSNV-LLDGNF---KPKLSDFGLAREGPTGDHT 239
I +G+ YLH ++ + D K N+ LLD N KL DFGLA E G
Sbjct: 119 SFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF 175
Query: 240 HVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTG 281
+ GT + APE + L ++D+WS GV+ Y +L+G
Sbjct: 176 ---KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 72/162 (44%), Gaps = 16/162 (9%)
Query: 124 EVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRL 183
EV L V H N++ L E +L+ E + L D F + +L +
Sbjct: 65 EVSILRQVLHHNVITLHDVY----ENRTDVVLILELVSGGELFD--FLAQKESLSEEEAT 118
Query: 184 EIILGAAEGLAYLHEGLEIQVIYRDFKTSNV-LLDGNF---KPKLSDFGLAREGPTGDHT 239
I +G+ YLH ++ + D K N+ LLD N KL DFGLA E G
Sbjct: 119 SFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF 175
Query: 240 HVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTG 281
+ GT + APE + L ++D+WS GV+ Y +L+G
Sbjct: 176 ---KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 72/162 (44%), Gaps = 16/162 (9%)
Query: 124 EVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRL 183
EV L V H N++ L E +L+ E + L D F + +L +
Sbjct: 65 EVSILRQVLHHNVITLHDVY----ENRTDVVLILELVSGGELFD--FLAQKESLSEEEAT 118
Query: 184 EIILGAAEGLAYLHEGLEIQVIYRDFKTSNV-LLDGNF---KPKLSDFGLAREGPTGDHT 239
I +G+ YLH ++ + D K N+ LLD N KL DFGLA E G
Sbjct: 119 SFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF 175
Query: 240 HVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTG 281
+ GT + APE + L ++D+WS GV+ Y +L+G
Sbjct: 176 ---KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 96/223 (43%), Gaps = 35/223 (15%)
Query: 70 ATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKL----NNHGLQGHKQWLAEV 125
+ + + R+ K+GEG +G VYK + VA+K++ G+ G + EV
Sbjct: 32 SIDRYRRITKLGEGTYGEVYKAIDTVTNE-----TVAIKRIRLEHEEEGVPGTA--IREV 84
Query: 126 QFLGVVSHPNLVKLLGYCSTEDERGIQRL-LVYEYMPNRSLEDRLFSRAQPTLPWKTRLE 184
L + H N+++L RL L++EY N + + + P + +
Sbjct: 85 SLLKELQHRNIIELKSVIHHN-----HRLHLIFEYAEN---DLKKYMDKNPDVSMRVIKS 136
Query: 185 IILGAAEGLAYLHEGLEIQVIYRDFKTSNVLL---DGNFKP--KLSDFGLAREG--PTGD 237
+ G+ + H + ++RD K N+LL D + P K+ DFGLAR P
Sbjct: 137 FLYQLINGVNFCHSR---RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQ 193
Query: 238 HTHVSTAVVGTYGYAAPE-YIETGHLKSQSDIWSFGVVLYEIL 279
TH + T Y PE + + H + DIWS + E+L
Sbjct: 194 FTH----EIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEML 232
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 72/172 (41%), Gaps = 28/172 (16%)
Query: 189 AAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLARE-GPTGDHTHVSTAVVG 247
A+G+ +L + I+RD N+LL K+ DFGLAR+ D+ A +
Sbjct: 200 VAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL- 255
Query: 248 TYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADG 307
+ APE I QSD+WSFGV+L+EI + + P G
Sbjct: 256 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-------------------LGASPYPG 296
Query: 308 KKFSMMIDPRLRNQYSINA----ARRVAKLADNCLKKNPEERPTMNQVVESL 355
K RL+ + A + + +C P +RPT +++VE L
Sbjct: 297 VKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 348
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 72/162 (44%), Gaps = 16/162 (9%)
Query: 124 EVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRL 183
EV L V H N++ L E +L+ E + L D F + +L +
Sbjct: 65 EVSILRQVLHHNVITLHDVY----ENRTDVVLILELVSGGELFD--FLAQKESLSEEEAT 118
Query: 184 EIILGAAEGLAYLHEGLEIQVIYRDFKTSNV-LLDGNF---KPKLSDFGLAREGPTGDHT 239
I +G+ YLH ++ + D K N+ LLD N KL DFGLA E G
Sbjct: 119 SFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF 175
Query: 240 HVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTG 281
+ GT + APE + L ++D+WS GV+ Y +L+G
Sbjct: 176 ---KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 131/306 (42%), Gaps = 50/306 (16%)
Query: 63 DMQELREATNGFN---RMLK----IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL 115
D++EL G + R LK IG G F +VYKG LD + VA +L + L
Sbjct: 10 DIEELETKAVGXSNDGRFLKFDIEIGRGSFKTVYKG----LDTET-TVEVAWCELQDRKL 64
Query: 116 QG--HKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRL---- 169
+++ E + L + HPN+V+ + + +LV E + +L+ L
Sbjct: 65 TKSERQRFKEEAEXLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFK 124
Query: 170 FSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDG-NFKPKLSDFG 228
+ + W ++ +GL +LH +I+RD K N+ + G K+ D G
Sbjct: 125 VXKIKVLRSWCRQI------LKGLQFLHTRTP-PIIHRDLKCDNIFITGPTGSVKIGDLG 177
Query: 229 LAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLE-- 286
LA T + AV+GT + APE E + +S D+++FG E T
Sbjct: 178 LA----TLKRASFAKAVIGTPEFXAPEXYEEKYDES-VDVYAFGXCXLEXATSEYPYSEC 232
Query: 287 RNRPTMEQKLLEWVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERP 346
+N + +++ VK PA K ++ V ++ + C+++N +ER
Sbjct: 233 QNAAQIYRRVTSGVK--PASFDKVAIP---------------EVKEIIEGCIRQNKDERY 275
Query: 347 TMNQVV 352
++ ++
Sbjct: 276 SIKDLL 281
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 115/281 (40%), Gaps = 44/281 (15%)
Query: 15 KGSNSAPEPRNQNRLDNNSALNRTARSLPSPRSIPE---LYKEKEHHLRVFDMQELREAT 71
+GS S+ + + L A + PSP++ L EK L+ D E RE
Sbjct: 18 QGSVSSGQAHSLTSLAKTWAARGSRSREPSPKTEDNEGVLLTEK---LKPVDY-EYREEV 73
Query: 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVV 131
+ L++G G FG V++ ++ + AVKK+ + E+ +
Sbjct: 74 HWATHQLRLGRGSFGEVHR-----MEDKQTGFQCAVKKVRLEVFRAE-----ELMACAGL 123
Query: 132 SHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAE 191
+ P +V L G G + E + SL + Q LP L + A E
Sbjct: 124 TSPRIVPLYGAV----REGPWVNIFMELLEGGSLGQ--LVKEQGCLPEDRALYYLGQALE 177
Query: 192 GLAYLHEGLEIQVIYRDFKTSNVLL--DGNFKPKLSDF---------GLAREGPTGDHTH 240
GL YLH ++++ D K NVLL DG+ L DF GL ++ TGD+
Sbjct: 178 GLEYLH---SRRILHGDVKADNVLLSSDGSHA-ALCDFGHAVCLQPDGLGKDLLTGDY-- 231
Query: 241 VSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTG 281
+ GT + APE + ++ D+WS ++ +L G
Sbjct: 232 ----IPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG 268
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 55/131 (41%), Gaps = 10/131 (7%)
Query: 154 LLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSN 213
L++ E M L R+ R + EI+ + +LH + +RD K N
Sbjct: 102 LIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKPEN 158
Query: 214 VLLDGNFKP---KLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWS 270
+L K KL+DFG A+E + T Y Y APE + D+WS
Sbjct: 159 LLYTSKEKDAVLKLTDFGFAKET---TQNALQTPCYTPY-YVAPEVLGPEKYDKSCDMWS 214
Query: 271 FGVVLYEILTG 281
GV++Y +L G
Sbjct: 215 LGVIMYILLCG 225
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 55/131 (41%), Gaps = 10/131 (7%)
Query: 154 LLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSN 213
L++ E M L R+ R + EI+ + +LH + +RD K N
Sbjct: 83 LIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKPEN 139
Query: 214 VLLDGNFKP---KLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWS 270
+L K KL+DFG A+E + T Y Y APE + D+WS
Sbjct: 140 LLYTSKEKDAVLKLTDFGFAKET---TQNALQTPCYTPY-YVAPEVLGPEKYDKSCDMWS 195
Query: 271 FGVVLYEILTG 281
GV++Y +L G
Sbjct: 196 LGVIMYILLCG 206
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 86/194 (44%), Gaps = 39/194 (20%)
Query: 179 WKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLL-DGNFKPKLSDFGLAREGPTGD 237
WK LE + H + +++ D K +N L+ DG K L DFG+A +
Sbjct: 161 WKNMLEAV----------HTIHQHGIVHSDLKPANFLIVDGMLK--LIDFGIANQMQPDT 208
Query: 238 HTHVSTAVVGTYGYAAPEYI-------ETG----HLKSQSDIWSFGVVLYEILTGRRVLE 286
+ V + VGT Y PE I E G + +SD+WS G +LY + G+
Sbjct: 209 TSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK---- 264
Query: 287 RNRPTMEQKLLEWVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERP 346
T Q+++ + + A +IDP ++ + + + CLK++P++R
Sbjct: 265 ----TPFQQIINQISKLHA-------IIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRI 313
Query: 347 TMNQVVESLKLAVQ 360
++ +++ + +Q
Sbjct: 314 SIPELLAHPYVQIQ 327
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 114/281 (40%), Gaps = 44/281 (15%)
Query: 15 KGSNSAPEPRNQNRLDNNSALNRTARSLPSPRSIPE---LYKEKEHHLRVFDMQELREAT 71
+GS S+ + + L A + PSP++ L EK L+ D E RE
Sbjct: 37 QGSVSSGQAHSLTSLAKTWAARGSRSREPSPKTEDNEGVLLTEK---LKPVDY-EYREEV 92
Query: 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVV 131
+ L++G G FG V++ ++ + AVKK+ + E+ +
Sbjct: 93 HWATHQLRLGRGSFGEVHR-----MEDKQTGFQCAVKKVRLEVFRAE-----ELMACAGL 142
Query: 132 SHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAE 191
+ P +V L G G + E + SL + Q LP L + A E
Sbjct: 143 TSPRIVPLYGAV----REGPWVNIFMELLEGGSLGQ--LVKEQGCLPEDRALYYLGQALE 196
Query: 192 GLAYLHEGLEIQVIYRDFKTSNVLL--DGNFKPKLSDF---------GLAREGPTGDHTH 240
GL YLH ++++ D K NVLL DG+ L DF GL + TGD+
Sbjct: 197 GLEYLH---SRRILHGDVKADNVLLSSDGSHA-ALCDFGHAVCLQPDGLGKSLLTGDY-- 250
Query: 241 VSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTG 281
+ GT + APE + ++ D+WS ++ +L G
Sbjct: 251 ----IPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG 287
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 86/194 (44%), Gaps = 39/194 (20%)
Query: 179 WKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLL-DGNFKPKLSDFGLAREGPTGD 237
WK LE + H + +++ D K +N L+ DG K L DFG+A +
Sbjct: 161 WKNMLEAV----------HTIHQHGIVHSDLKPANFLIVDGMLK--LIDFGIANQMQPDT 208
Query: 238 HTHVSTAVVGTYGYAAPEYI-------ETG----HLKSQSDIWSFGVVLYEILTGRRVLE 286
+ V + VGT Y PE I E G + +SD+WS G +LY + G+
Sbjct: 209 TSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK---- 264
Query: 287 RNRPTMEQKLLEWVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERP 346
T Q+++ + + A +IDP ++ + + + CLK++P++R
Sbjct: 265 ----TPFQQIINQISKLHA-------IIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRI 313
Query: 347 TMNQVVESLKLAVQ 360
++ +++ + +Q
Sbjct: 314 SIPELLAHPYVQIQ 327
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 115/283 (40%), Gaps = 53/283 (18%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVK-----KLNNHG-LQGHKQWLAEVQFLGVVS- 132
+G GGFGSVY G IR D L VA+K ++++ G L + EV L VS
Sbjct: 16 LGSGGFGSVYSG-IRVSDN----LPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 70
Query: 133 -HPNLVKLLGYCSTEDERGIQRLLVYEY-MPNRSLEDRLFSRAQPTLPWKTRLEIILGAA 190
+++LL + ER +L+ E P + L D + R L +
Sbjct: 71 GFSGVIRLLDWF----ERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFFWQVL 124
Query: 191 EGLAYLHEGLEIQVIYRDFKTSNVLLDGN-FKPKLSDFGLAREGPTGDHTHVSTAVVGTY 249
E + + H V++RD K N+L+D N + KL DFG G T V T GT
Sbjct: 125 EAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT-VYTDFDGTR 177
Query: 250 GYAAPEYIETGHLKSQS-DIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGK 308
Y+ PE+I +S +WS G++LY+++ G E + + ++
Sbjct: 178 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVF----------- 226
Query: 309 KFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQV 351
+ + L CL P +RPT ++
Sbjct: 227 -------------FRQRVSSECQHLIRWCLALRPSDRPTFEEI 256
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 74/161 (45%), Gaps = 31/161 (19%)
Query: 133 HPNLVKL--------LGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLE 184
HPN++ L Y TE +G + L ++ L + FS + +
Sbjct: 75 HPNIITLKDVYDDGKYVYVVTELXKGGELL-------DKILRQKFFSEREAS-------A 120
Query: 185 IILGAAEGLAYLHEGLEIQVIYRDFKTSNVL-LDGNFKP---KLSDFGLAREGPTGDHTH 240
++ + + YLH V++RD K SN+L +D + P ++ DFG A++ ++
Sbjct: 121 VLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQ-LRAENGL 176
Query: 241 VSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTG 281
+ T T + APE +E + DIWS GV+LY LTG
Sbjct: 177 LXTPCY-TANFVAPEVLERQGYDAACDIWSLGVLLYTXLTG 216
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 115/283 (40%), Gaps = 53/283 (18%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVK-----KLNNHG-LQGHKQWLAEVQFLGVVS- 132
+G GGFGSVY G IR D L VA+K ++++ G L + EV L VS
Sbjct: 31 LGSGGFGSVYSG-IRVSDN----LPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 85
Query: 133 -HPNLVKLLGYCSTEDERGIQRLLVYEY-MPNRSLEDRLFSRAQPTLPWKTRLEIILGAA 190
+++LL + ER +L+ E P + L D + R L +
Sbjct: 86 GFSGVIRLLDWF----ERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFFWQVL 139
Query: 191 EGLAYLHEGLEIQVIYRDFKTSNVLLDGN-FKPKLSDFGLAREGPTGDHTHVSTAVVGTY 249
E + + H V++RD K N+L+D N + KL DFG G T V T GT
Sbjct: 140 EAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT-VYTDFDGTR 192
Query: 250 GYAAPEYIETGHLKSQS-DIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGK 308
Y+ PE+I +S +WS G++LY+++ G E + + ++
Sbjct: 193 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVF----------- 241
Query: 309 KFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQV 351
+ + L CL P +RPT ++
Sbjct: 242 -------------FRQRVSSECQHLIRWCLALRPSDRPTFEEI 271
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 86/194 (44%), Gaps = 39/194 (20%)
Query: 179 WKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLL-DGNFKPKLSDFGLAREGPTGD 237
WK LE + H + +++ D K +N L+ DG K L DFG+A +
Sbjct: 117 WKNMLEAV----------HTIHQHGIVHSDLKPANFLIVDGMLK--LIDFGIANQMQPDT 164
Query: 238 HTHVSTAVVGTYGYAAPEYI-------ETG----HLKSQSDIWSFGVVLYEILTGRRVLE 286
+ V + VGT Y PE I E G + +SD+WS G +LY + G+
Sbjct: 165 TSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK---- 220
Query: 287 RNRPTMEQKLLEWVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERP 346
T Q+++ + + A +IDP ++ + + + CLK++P++R
Sbjct: 221 ----TPFQQIINQISKLHA-------IIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRI 269
Query: 347 TMNQVVESLKLAVQ 360
++ +++ + +Q
Sbjct: 270 SIPELLAHPYVQIQ 283
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 86/194 (44%), Gaps = 39/194 (20%)
Query: 179 WKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLL-DGNFKPKLSDFGLAREGPTGD 237
WK LE + H + +++ D K +N L+ DG K L DFG+A +
Sbjct: 114 WKNMLEAV----------HTIHQHGIVHSDLKPANFLIVDGMLK--LIDFGIANQMQPDT 161
Query: 238 HTHVSTAVVGTYGYAAPEYI-------ETG----HLKSQSDIWSFGVVLYEILTGRRVLE 286
+ V + VGT Y PE I E G + +SD+WS G +LY + G+
Sbjct: 162 TSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK---- 217
Query: 287 RNRPTMEQKLLEWVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERP 346
T Q+++ + + A +IDP ++ + + + CLK++P++R
Sbjct: 218 ----TPFQQIINQISKLHA-------IIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRI 266
Query: 347 TMNQVVESLKLAVQ 360
++ +++ + +Q
Sbjct: 267 SIPELLAHPYVQIQ 280
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 116/283 (40%), Gaps = 53/283 (18%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVK-----KLNNHG-LQGHKQWLAEVQFLGVVS- 132
+G GGFGSVY G IR D L VA+K ++++ G L + EV L VS
Sbjct: 17 LGSGGFGSVYSG-IRVSDN----LPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 71
Query: 133 -HPNLVKLLGYCSTEDERGIQRLLVYEY-MPNRSLEDRLFSRAQPTLPWKTRLEIILGAA 190
+++LL + ER +L+ E P + L D + R L +
Sbjct: 72 GFSGVIRLLDWF----ERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFFWQVL 125
Query: 191 EGLAYLHEGLEIQVIYRDFKTSNVLLDGN-FKPKLSDFGLAREGPTGDHTHVSTAVVGTY 249
E + + H V++RD K N+L+D N + KL DFG G T V T GT
Sbjct: 126 EAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT-VYTDFDGTR 178
Query: 250 GYAAPEYIETGHLKSQS-DIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGK 308
Y+ PE+I +S +WS G++LY+++ G E + + G+
Sbjct: 179 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR-------------GQ 225
Query: 309 KFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQV 351
F + + L CL P +RPT ++
Sbjct: 226 VF-----------FRQRVSSECQHLIRWCLALRPSDRPTFEEI 257
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 116/283 (40%), Gaps = 53/283 (18%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVK-----KLNNHG-LQGHKQWLAEVQFLGVVS- 132
+G GGFGSVY G IR D L VA+K ++++ G L + EV L VS
Sbjct: 44 LGSGGFGSVYSG-IRVSDN----LPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 98
Query: 133 -HPNLVKLLGYCSTEDERGIQRLLVYEY-MPNRSLEDRLFSRAQPTLPWKTRLEIILGAA 190
+++LL + ER +L+ E P + L D + R L +
Sbjct: 99 GFSGVIRLLDWF----ERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFFWQVL 152
Query: 191 EGLAYLHEGLEIQVIYRDFKTSNVLLDGN-FKPKLSDFGLAREGPTGDHTHVSTAVVGTY 249
E + + H V++RD K N+L+D N + KL DFG G T V T GT
Sbjct: 153 EAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT-VYTDFDGTR 205
Query: 250 GYAAPEYIETGHLKSQS-DIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGK 308
Y+ PE+I +S +WS G++LY+++ G E + + G+
Sbjct: 206 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR-------------GQ 252
Query: 309 KFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQV 351
F + + L CL P +RPT ++
Sbjct: 253 VF-----------FRQRVSSECQHLIRWCLALRPSDRPTFEEI 284
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 116/283 (40%), Gaps = 53/283 (18%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVK-----KLNNHG-LQGHKQWLAEVQFLGVVS- 132
+G GGFGSVY G IR D L VA+K ++++ G L + EV L VS
Sbjct: 17 LGSGGFGSVYSG-IRVSDN----LPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 71
Query: 133 -HPNLVKLLGYCSTEDERGIQRLLVYEY-MPNRSLEDRLFSRAQPTLPWKTRLEIILGAA 190
+++LL + ER +L+ E P + L D + R L +
Sbjct: 72 GFSGVIRLLDWF----ERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFFWQVL 125
Query: 191 EGLAYLHEGLEIQVIYRDFKTSNVLLDGN-FKPKLSDFGLAREGPTGDHTHVSTAVVGTY 249
E + + H V++RD K N+L+D N + KL DFG G T V T GT
Sbjct: 126 EAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT-VYTDFDGTR 178
Query: 250 GYAAPEYIETGHLKSQS-DIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGK 308
Y+ PE+I +S +WS G++LY+++ G E + + G+
Sbjct: 179 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR-------------GQ 225
Query: 309 KFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQV 351
F + + L CL P +RPT ++
Sbjct: 226 VF-----------FRQRVSSECQHLIRWCLALRPSDRPTFEEI 257
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 115/283 (40%), Gaps = 53/283 (18%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVK-----KLNNHG-LQGHKQWLAEVQFLGVVS- 132
+G GGFGSVY G IR D L VA+K ++++ G L + EV L VS
Sbjct: 17 LGSGGFGSVYSG-IRVSDN----LPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 71
Query: 133 -HPNLVKLLGYCSTEDERGIQRLLVYEY-MPNRSLEDRLFSRAQPTLPWKTRLEIILGAA 190
+++LL + ER +L+ E P + L D + R L +
Sbjct: 72 GFSGVIRLLDWF----ERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFFWQVL 125
Query: 191 EGLAYLHEGLEIQVIYRDFKTSNVLLDGN-FKPKLSDFGLAREGPTGDHTHVSTAVVGTY 249
E + + H V++RD K N+L+D N + KL DFG G T V T GT
Sbjct: 126 EAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT-VYTDFDGTR 178
Query: 250 GYAAPEYIETGHLKSQS-DIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGK 308
Y+ PE+I +S +WS G++LY+++ G E + + ++
Sbjct: 179 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVF----------- 227
Query: 309 KFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQV 351
+ + L CL P +RPT ++
Sbjct: 228 -------------FRQRVSSECQHLIRWCLALRPSDRPTFEEI 257
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 115/283 (40%), Gaps = 53/283 (18%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVK-----KLNNHG-LQGHKQWLAEVQFLGVVS- 132
+G GGFGSVY G IR D L VA+K ++++ G L + EV L VS
Sbjct: 32 LGSGGFGSVYSG-IRVSDN----LPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 86
Query: 133 -HPNLVKLLGYCSTEDERGIQRLLVYEY-MPNRSLEDRLFSRAQPTLPWKTRLEIILGAA 190
+++LL + ER +L+ E P + L D + R L +
Sbjct: 87 GFSGVIRLLDWF----ERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFFWQVL 140
Query: 191 EGLAYLHEGLEIQVIYRDFKTSNVLLDGN-FKPKLSDFGLAREGPTGDHTHVSTAVVGTY 249
E + + H V++RD K N+L+D N + KL DFG G T V T GT
Sbjct: 141 EAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT-VYTDFDGTR 193
Query: 250 GYAAPEYIETGHLKSQS-DIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGK 308
Y+ PE+I +S +WS G++LY+++ G E + + ++
Sbjct: 194 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVF----------- 242
Query: 309 KFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQV 351
+ + L CL P +RPT ++
Sbjct: 243 -------------FRQRVSSECQHLIRWCLALRPSDRPTFEEI 272
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 86/194 (44%), Gaps = 39/194 (20%)
Query: 179 WKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLL-DGNFKPKLSDFGLAREGPTGD 237
WK LE + H + +++ D K +N L+ DG K L DFG+A +
Sbjct: 133 WKNMLEAV----------HTIHQHGIVHSDLKPANFLIVDGMLK--LIDFGIANQMQPDT 180
Query: 238 HTHVSTAVVGTYGYAAPEYI-------ETG----HLKSQSDIWSFGVVLYEILTGRRVLE 286
+ V + VGT Y PE I E G + +SD+WS G +LY + G+
Sbjct: 181 TSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK---- 236
Query: 287 RNRPTMEQKLLEWVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERP 346
T Q+++ + + A +IDP ++ + + + CLK++P++R
Sbjct: 237 ----TPFQQIINQISKLHA-------IIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRI 285
Query: 347 TMNQVVESLKLAVQ 360
++ +++ + +Q
Sbjct: 286 SIPELLAHPYVQIQ 299
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 86/194 (44%), Gaps = 39/194 (20%)
Query: 179 WKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLL-DGNFKPKLSDFGLAREGPTGD 237
WK LE + H + +++ D K +N L+ DG K L DFG+A +
Sbjct: 113 WKNMLEAV----------HTIHQHGIVHSDLKPANFLIVDGMLK--LIDFGIANQMQPDT 160
Query: 238 HTHVSTAVVGTYGYAAPEYI-------ETG----HLKSQSDIWSFGVVLYEILTGRRVLE 286
+ V + VGT Y PE I E G + +SD+WS G +LY + G+
Sbjct: 161 TSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK---- 216
Query: 287 RNRPTMEQKLLEWVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERP 346
T Q+++ + + A +IDP ++ + + + CLK++P++R
Sbjct: 217 ----TPFQQIINQISKLHA-------IIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRI 265
Query: 347 TMNQVVESLKLAVQ 360
++ +++ + +Q
Sbjct: 266 SIPELLAHPYVQIQ 279
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 115/283 (40%), Gaps = 53/283 (18%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVK-----KLNNHG-LQGHKQWLAEVQFLGVVS- 132
+G GGFGSVY G IR D L VA+K ++++ G L + EV L VS
Sbjct: 32 LGSGGFGSVYSG-IRVSDN----LPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 86
Query: 133 -HPNLVKLLGYCSTEDERGIQRLLVYEY-MPNRSLEDRLFSRAQPTLPWKTRLEIILGAA 190
+++LL + ER +L+ E P + L D + R L +
Sbjct: 87 GFSGVIRLLDWF----ERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFFWQVL 140
Query: 191 EGLAYLHEGLEIQVIYRDFKTSNVLLDGN-FKPKLSDFGLAREGPTGDHTHVSTAVVGTY 249
E + + H V++RD K N+L+D N + KL DFG G T V T GT
Sbjct: 141 EAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT-VYTDFDGTR 193
Query: 250 GYAAPEYIETGHLKSQS-DIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGK 308
Y+ PE+I +S +WS G++LY+++ G E + + ++
Sbjct: 194 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVF----------- 242
Query: 309 KFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQV 351
+ + L CL P +RPT ++
Sbjct: 243 -------------FRQRVSXECQHLIRWCLALRPSDRPTFEEI 272
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 112/256 (43%), Gaps = 43/256 (16%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVK-----KLNNHG-LQGHKQWLAEVQFLGVVS- 132
+G GGFGSVY G IR D L VA+K ++++ G L + EV L VS
Sbjct: 44 LGSGGFGSVYSG-IRVSDN----LPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 98
Query: 133 -HPNLVKLLGYCSTEDERGIQRLLVYEY-MPNRSLEDRLFSRAQPTLPWKTRLEIILGAA 190
+++LL + ER +L+ E P + L D + R L +
Sbjct: 99 GFSGVIRLLDWF----ERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFFWQVL 152
Query: 191 EGLAYLHEGLEIQVIYRDFKTSNVLLDGN-FKPKLSDFGLAREGPTGDHTHVSTAVVGTY 249
E + + H V++RD K N+L+D N + KL DFG G T V T GT
Sbjct: 153 EAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT-VYTDFDGTR 205
Query: 250 GYAAPEYIETGHLKSQS-DIWSFGVVLYEILTGR------------RVLERNRPTME-QK 295
Y+ PE+I +S +WS G++LY+++ G +V R R + E Q
Sbjct: 206 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSXECQH 265
Query: 296 LLEWVKQF-PADGKKF 310
L+ W P+D F
Sbjct: 266 LIRWCLALRPSDRPTF 281
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 116/283 (40%), Gaps = 53/283 (18%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVK-----KLNNHG-LQGHKQWLAEVQFLGVVS- 132
+G GGFGSVY G IR D L VA+K ++++ G L + EV L VS
Sbjct: 15 LGSGGFGSVYSG-IRVSDN----LPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 69
Query: 133 -HPNLVKLLGYCSTEDERGIQRLLVYEY-MPNRSLEDRLFSRAQPTLPWKTRLEIILGAA 190
+++LL + ER +L+ E P + L D + R L +
Sbjct: 70 GFSGVIRLLDWF----ERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFFWQVL 123
Query: 191 EGLAYLHEGLEIQVIYRDFKTSNVLLDGN-FKPKLSDFGLAREGPTGDHTHVSTAVVGTY 249
E + + H V++RD K N+L+D N + KL DFG G T V T GT
Sbjct: 124 EAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT-VYTDFDGTR 176
Query: 250 GYAAPEYIETGHLKSQS-DIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGK 308
Y+ PE+I +S +WS G++LY+++ G E + + G+
Sbjct: 177 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR-------------GQ 223
Query: 309 KFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQV 351
F + + L CL P +RPT ++
Sbjct: 224 VF-----------FRQRVSSECQHLIRWCLALRPSDRPTFEEI 255
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 116/283 (40%), Gaps = 53/283 (18%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVK-----KLNNHG-LQGHKQWLAEVQFLGVVS- 132
+G GGFGSVY G IR D L VA+K ++++ G L + EV L VS
Sbjct: 59 LGSGGFGSVYSG-IRVSDN----LPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 113
Query: 133 -HPNLVKLLGYCSTEDERGIQRLLVYEY-MPNRSLEDRLFSRAQPTLPWKTRLEIILGAA 190
+++LL + ER +L+ E P + L D + R L +
Sbjct: 114 GFSGVIRLLDWF----ERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFFWQVL 167
Query: 191 EGLAYLHEGLEIQVIYRDFKTSNVLLDGN-FKPKLSDFGLAREGPTGDHTHVSTAVVGTY 249
E + + H V++RD K N+L+D N + KL DFG G T V T GT
Sbjct: 168 EAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT-VYTDFDGTR 220
Query: 250 GYAAPEYIETGHLKSQS-DIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGK 308
Y+ PE+I +S +WS G++LY+++ G E + + G+
Sbjct: 221 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR-------------GQ 267
Query: 309 KFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQV 351
F + + L CL P +RPT ++
Sbjct: 268 VF-----------FRQRVSSECQHLIRWCLALRPSDRPTFEEI 299
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 115/283 (40%), Gaps = 53/283 (18%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVK-----KLNNHG-LQGHKQWLAEVQFLGVVS- 132
+G GGFGSVY G IR D L VA+K ++++ G L + EV L VS
Sbjct: 31 LGSGGFGSVYSG-IRVSDN----LPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 85
Query: 133 -HPNLVKLLGYCSTEDERGIQRLLVYEY-MPNRSLEDRLFSRAQPTLPWKTRLEIILGAA 190
+++LL + ER +L+ E P + L D + R L +
Sbjct: 86 GFSGVIRLLDWF----ERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFFWQVL 139
Query: 191 EGLAYLHEGLEIQVIYRDFKTSNVLLDGN-FKPKLSDFGLAREGPTGDHTHVSTAVVGTY 249
E + + H V++RD K N+L+D N + KL DFG G T V T GT
Sbjct: 140 EAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT-VYTDFDGTR 192
Query: 250 GYAAPEYIETGHLKSQS-DIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGK 308
Y+ PE+I +S +WS G++LY+++ G E + + ++
Sbjct: 193 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVF----------- 241
Query: 309 KFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQV 351
+ + L CL P +RPT ++
Sbjct: 242 -------------FRQRVSXECQHLIRWCLALRPSDRPTFEEI 271
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 80/184 (43%), Gaps = 36/184 (19%)
Query: 183 LEIILGAAEGLAYLH-EGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGL--AREGPTGDHT 239
L I + AE + +LH +GL ++RD K SN+ + K+ DFGL A + + T
Sbjct: 167 LHIFIQIAEAVEFLHSKGL----MHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQT 222
Query: 240 HVS--------TAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRV-LERNRP 290
++ VGT Y +PE I + + DI+S G++L+E+L +ER R
Sbjct: 223 VLTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERVRI 282
Query: 291 TMEQKLLEWVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQ 350
+ + L++ F + MM+ + L +P ERP
Sbjct: 283 ITDVRNLKFPLLFTQKYPQEHMMV--------------------QDMLSPSPTERPEATD 322
Query: 351 VVES 354
++E+
Sbjct: 323 IIEN 326
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 112/256 (43%), Gaps = 43/256 (16%)
Query: 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVK-----KLNNHG-LQGHKQWLAEVQFLGVVS- 132
+G GGFGSVY G IR D L VA+K ++++ G L + EV L VS
Sbjct: 45 LGSGGFGSVYSG-IRVSDN----LPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 99
Query: 133 -HPNLVKLLGYCSTEDERGIQRLLVYEY-MPNRSLEDRLFSRAQPTLPWKTRLEIILGAA 190
+++LL + ER +L+ E P + L D + R L +
Sbjct: 100 GFSGVIRLLDWF----ERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFFWQVL 153
Query: 191 EGLAYLHEGLEIQVIYRDFKTSNVLLDGN-FKPKLSDFGLAREGPTGDHTHVSTAVVGTY 249
E + + H V++RD K N+L+D N + KL DFG G T V T GT
Sbjct: 154 EAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT-VYTDFDGTR 206
Query: 250 GYAAPEYIETGHLKSQS-DIWSFGVVLYEILTGR------------RVLERNRPTME-QK 295
Y+ PE+I +S +WS G++LY+++ G +V R R + E Q
Sbjct: 207 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSXECQH 266
Query: 296 LLEWVKQF-PADGKKF 310
L+ W P+D F
Sbjct: 267 LIRWCLALRPSDRPTF 282
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.135 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,752,430
Number of Sequences: 62578
Number of extensions: 500359
Number of successful extensions: 4230
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 911
Number of HSP's successfully gapped in prelim test: 153
Number of HSP's that attempted gapping in prelim test: 1378
Number of HSP's gapped (non-prelim): 1145
length of query: 393
length of database: 14,973,337
effective HSP length: 101
effective length of query: 292
effective length of database: 8,652,959
effective search space: 2526664028
effective search space used: 2526664028
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 52 (24.6 bits)