Query 035862
Match_columns 393
No_of_seqs 296 out of 2625
Neff 9.9
Searched_HMMs 46136
Date Fri Mar 29 07:06:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/035862.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/035862hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0581 Mitogen-activated prot 100.0 6.7E-54 1.5E-58 377.9 18.3 261 72-363 79-344 (364)
2 KOG0615 Serine/threonine prote 100.0 4.2E-53 9E-58 375.7 15.3 259 69-358 169-441 (475)
3 KOG0595 Serine/threonine-prote 100.0 5.3E-52 1.1E-56 369.0 20.0 254 71-356 9-270 (429)
4 KOG1187 Serine/threonine prote 100.0 7.4E-51 1.6E-55 378.1 26.2 291 58-360 61-354 (361)
5 KOG0575 Polo-like serine/threo 100.0 4.1E-51 8.8E-56 380.3 20.8 252 72-357 18-272 (592)
6 KOG0591 NIMA (never in mitosis 100.0 4.2E-52 9.2E-57 352.3 11.6 261 72-357 19-284 (375)
7 KOG0593 Predicted protein kina 100.0 3E-51 6.4E-56 350.5 15.2 267 72-355 2-285 (396)
8 KOG0192 Tyrosine kinase specif 100.0 1.5E-49 3.2E-54 366.8 25.3 262 74-365 43-310 (362)
9 KOG0598 Ribosomal protein S6 k 100.0 5E-50 1.1E-54 353.3 16.5 251 72-355 25-282 (357)
10 KOG0661 MAPK related serine/th 100.0 3.5E-50 7.7E-55 362.9 13.9 274 70-360 8-297 (538)
11 KOG0197 Tyrosine kinases [Sign 100.0 4.4E-49 9.5E-54 362.9 18.7 256 74-361 208-464 (468)
12 KOG0659 Cdk activating kinase 100.0 1.6E-48 3.5E-53 328.1 20.4 271 72-358 2-285 (318)
13 KOG0600 Cdc2-related protein k 100.0 1.7E-48 3.7E-53 354.5 17.7 273 71-357 116-403 (560)
14 KOG0198 MEKK and related serin 100.0 3E-48 6.4E-53 347.7 17.4 264 73-362 18-284 (313)
15 KOG0597 Serine-threonine prote 100.0 3.3E-48 7.2E-53 356.2 17.7 249 72-355 2-252 (808)
16 KOG0583 Serine/threonine prote 100.0 3.5E-47 7.7E-52 354.2 23.2 256 70-359 15-280 (370)
17 KOG0605 NDR and related serine 100.0 1E-47 2.2E-52 352.3 18.9 258 70-357 139-448 (550)
18 KOG0578 p21-activated serine/t 100.0 8.3E-48 1.8E-52 355.4 17.6 258 71-360 272-529 (550)
19 KOG0592 3-phosphoinositide-dep 100.0 9.2E-48 2E-52 352.5 16.8 255 70-356 71-340 (604)
20 KOG0663 Protein kinase PITSLRE 100.0 5.7E-47 1.2E-51 328.2 18.1 274 72-359 76-366 (419)
21 KOG0582 Ste20-like serine/thre 100.0 2.7E-46 5.8E-51 335.5 22.5 266 72-357 26-296 (516)
22 cd05102 PTKc_VEGFR3 Catalytic 100.0 1.8E-46 3.9E-51 351.3 21.5 269 71-361 6-337 (338)
23 KOG0585 Ca2+/calmodulin-depend 100.0 3.5E-47 7.6E-52 343.3 15.6 278 62-368 87-386 (576)
24 KOG0660 Mitogen-activated prot 100.0 2.3E-47 4.9E-52 335.2 13.7 276 71-359 21-315 (359)
25 KOG0616 cAMP-dependent protein 100.0 6.8E-47 1.5E-51 322.9 15.5 250 71-357 43-300 (355)
26 KOG0580 Serine/threonine prote 100.0 5.3E-47 1.1E-51 314.5 14.2 254 71-358 21-277 (281)
27 KOG0201 Serine/threonine prote 100.0 2.5E-47 5.4E-52 341.8 10.7 249 73-354 14-263 (467)
28 KOG1026 Nerve growth factor re 100.0 4.5E-46 9.7E-51 359.2 16.6 272 72-367 486-771 (774)
29 KOG0594 Protein kinase PCTAIRE 100.0 6.6E-45 1.4E-49 320.7 20.3 275 72-358 11-306 (323)
30 cd05631 STKc_GRK4 Catalytic do 100.0 9.6E-45 2.1E-49 331.5 21.7 256 73-358 1-265 (285)
31 KOG0611 Predicted serine/threo 100.0 2.8E-46 6.1E-51 331.3 11.1 254 71-360 52-309 (668)
32 KOG0658 Glycogen synthase kina 100.0 4.7E-46 1E-50 327.5 12.4 268 73-356 25-308 (364)
33 KOG0588 Serine/threonine prote 100.0 8.6E-46 1.9E-50 346.4 14.5 260 72-366 12-275 (786)
34 KOG0694 Serine/threonine prote 100.0 8E-45 1.7E-49 342.1 19.1 251 70-355 366-625 (694)
35 cd05612 STKc_PRKX_like Catalyt 100.0 8.4E-45 1.8E-49 332.8 18.2 250 72-358 1-258 (291)
36 cd05106 PTKc_CSF-1R Catalytic 100.0 1.5E-44 3.2E-49 342.0 20.0 265 72-359 38-373 (374)
37 cd07848 STKc_CDKL5 Catalytic d 100.0 2.3E-44 5E-49 329.2 20.6 270 72-356 1-286 (287)
38 cd06649 PKc_MEK2 Catalytic dom 100.0 7E-44 1.5E-48 332.6 23.9 269 71-359 4-306 (331)
39 KOG0589 Serine/threonine prote 100.0 6.9E-45 1.5E-49 334.0 16.6 258 71-358 3-262 (426)
40 cd07871 STKc_PCTAIRE3 Catalyti 100.0 4.6E-44 9.9E-49 327.5 21.9 269 72-356 5-287 (288)
41 cd05104 PTKc_Kit Catalytic dom 100.0 2.4E-44 5.2E-49 340.9 20.5 264 72-358 35-374 (375)
42 KOG0667 Dual-specificity tyros 100.0 2E-44 4.3E-49 339.1 19.1 269 72-359 186-507 (586)
43 PTZ00263 protein kinase A cata 100.0 1.2E-44 2.6E-49 337.3 17.5 249 72-357 18-274 (329)
44 cd05054 PTKc_VEGFR Catalytic d 100.0 6.1E-44 1.3E-48 333.4 21.2 268 72-361 7-336 (337)
45 cd05096 PTKc_DDR1 Catalytic do 100.0 2.7E-43 5.8E-48 325.0 24.9 268 72-356 5-303 (304)
46 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 3.6E-44 7.7E-49 335.0 19.2 257 72-358 1-261 (333)
47 cd05048 PTKc_Ror Catalytic Dom 100.0 2.2E-43 4.7E-48 322.1 23.8 262 72-357 5-282 (283)
48 KOG2345 Serine/threonine prote 100.0 1.9E-44 4.2E-49 300.7 15.3 268 71-359 20-301 (302)
49 cd05571 STKc_PKB Catalytic dom 100.0 2.5E-44 5.4E-49 334.4 17.9 246 78-357 1-254 (323)
50 KOG1989 ARK protein kinase fam 100.0 6.5E-44 1.4E-48 345.7 21.2 266 71-362 36-315 (738)
51 KOG0610 Putative serine/threon 100.0 7.7E-44 1.7E-48 317.1 19.8 258 71-356 76-394 (459)
52 PTZ00426 cAMP-dependent protei 100.0 3.2E-44 7E-49 335.4 18.2 251 71-357 29-287 (340)
53 PHA02988 hypothetical protein; 100.0 1.3E-43 2.9E-48 323.3 21.4 251 78-360 26-281 (283)
54 KOG4721 Serine/threonine prote 100.0 4.6E-45 1E-49 335.6 11.0 246 72-359 124-369 (904)
55 cd07862 STKc_CDK6 Catalytic do 100.0 2.3E-43 5E-48 323.1 22.0 273 72-356 1-289 (290)
56 cd07859 STKc_TDY_MAPK_plant Ca 100.0 2.3E-43 5E-48 330.2 22.3 275 73-358 1-294 (338)
57 cd07869 STKc_PFTAIRE1 Catalyti 100.0 4.1E-43 8.8E-48 323.6 23.6 272 71-358 4-292 (303)
58 PHA03212 serine/threonine kina 100.0 3E-43 6.6E-48 334.3 23.3 266 71-358 91-380 (391)
59 cd05093 PTKc_TrkB Catalytic do 100.0 7.2E-43 1.6E-47 319.6 24.8 267 72-362 5-283 (288)
60 cd05108 PTKc_EGFR Catalytic do 100.0 1.2E-42 2.6E-47 322.3 26.4 264 72-362 7-272 (316)
61 cd05105 PTKc_PDGFR_alpha Catal 100.0 2.9E-43 6.3E-48 334.7 22.5 267 71-360 36-399 (400)
62 PTZ00036 glycogen synthase kin 100.0 3.4E-43 7.4E-48 339.0 23.0 271 71-358 65-355 (440)
63 PLN00034 mitogen-activated pro 100.0 5.1E-43 1.1E-47 329.7 23.5 256 71-360 73-334 (353)
64 cd05094 PTKc_TrkC Catalytic do 100.0 1.1E-42 2.5E-47 318.8 25.2 265 72-360 5-284 (291)
65 cd05049 PTKc_Trk Catalytic dom 100.0 6.7E-43 1.5E-47 318.3 23.3 261 72-356 5-279 (280)
66 KOG0193 Serine/threonine prote 100.0 1.4E-43 3.1E-48 328.7 19.0 263 65-361 385-656 (678)
67 KOG0599 Phosphorylase kinase g 100.0 2.9E-44 6.3E-49 303.5 12.6 260 68-358 13-287 (411)
68 KOG0032 Ca2+/calmodulin-depend 100.0 3.2E-43 7E-48 327.4 20.9 254 71-356 34-295 (382)
69 KOG1095 Protein tyrosine kinas 100.0 2.4E-43 5.1E-48 352.0 21.2 268 73-364 693-967 (1025)
70 PTZ00267 NIMA-related protein 100.0 7.3E-43 1.6E-47 340.4 24.1 255 73-355 68-324 (478)
71 cd05585 STKc_YPK1_like Catalyt 100.0 1.6E-43 3.4E-48 327.6 18.3 245 80-358 1-251 (312)
72 cd06650 PKc_MEK1 Catalytic dom 100.0 6.9E-43 1.5E-47 326.0 22.6 269 71-360 4-305 (333)
73 cd05593 STKc_PKB_gamma Catalyt 100.0 1.9E-43 4.2E-48 329.0 18.7 246 78-357 1-254 (328)
74 cd05595 STKc_PKB_beta Catalyti 100.0 2.1E-43 4.6E-48 328.2 18.9 246 78-357 1-254 (323)
75 cd05064 PTKc_EphR_A10 Catalyti 100.0 1.6E-42 3.5E-47 313.6 24.0 259 72-358 5-265 (266)
76 KOG0194 Protein tyrosine kinas 100.0 1.9E-43 4.2E-48 330.5 17.9 271 67-365 152-427 (474)
77 PF07714 Pkinase_Tyr: Protein 100.0 6.1E-43 1.3E-47 315.0 20.4 255 76-355 3-259 (259)
78 cd05626 STKc_LATS2 Catalytic d 100.0 4.3E-43 9.3E-48 333.4 20.0 256 73-357 2-308 (381)
79 PTZ00283 serine/threonine prot 100.0 7.2E-43 1.6E-47 340.8 22.0 264 68-356 28-299 (496)
80 cd05628 STKc_NDR1 Catalytic do 100.0 6E-43 1.3E-47 330.4 20.5 256 72-357 1-296 (363)
81 cd05045 PTKc_RET Catalytic dom 100.0 3.7E-42 8.1E-47 315.2 25.1 265 73-361 1-289 (290)
82 cd05599 STKc_NDR_like Catalyti 100.0 2.5E-43 5.5E-48 333.3 17.6 256 72-357 1-299 (364)
83 cd05062 PTKc_IGF-1R Catalytic 100.0 3.9E-42 8.4E-47 312.9 24.5 263 70-356 4-276 (277)
84 cd05605 STKc_GRK4_like Catalyt 100.0 1.1E-42 2.3E-47 318.0 20.8 257 73-359 1-266 (285)
85 cd05055 PTKc_PDGFR Catalytic d 100.0 1.8E-42 4E-47 319.0 22.2 265 71-358 34-301 (302)
86 cd05092 PTKc_TrkA Catalytic do 100.0 4.2E-42 9.1E-47 313.2 24.1 261 72-356 5-279 (280)
87 cd05614 STKc_MSK2_N N-terminal 100.0 6.7E-43 1.5E-47 326.3 19.1 258 73-357 1-270 (332)
88 cd05589 STKc_PKN Catalytic dom 100.0 9.5E-43 2.1E-47 324.1 20.1 248 74-356 1-259 (324)
89 KOG0033 Ca2+/calmodulin-depend 100.0 6.6E-45 1.4E-49 302.9 4.6 256 71-358 10-271 (355)
90 cd05587 STKc_cPKC Catalytic do 100.0 9.1E-43 2E-47 324.2 19.4 250 73-356 1-259 (324)
91 KOG4717 Serine/threonine prote 100.0 5E-43 1.1E-47 318.9 17.1 256 72-361 18-277 (864)
92 cd05053 PTKc_FGFR Catalytic do 100.0 3E-42 6.6E-47 316.2 22.6 265 71-359 11-292 (293)
93 cd05629 STKc_NDR_like_fungal C 100.0 5.1E-43 1.1E-47 332.6 18.0 256 72-357 1-308 (377)
94 cd05584 STKc_p70S6K Catalytic 100.0 8.9E-43 1.9E-47 324.0 19.2 249 78-357 2-259 (323)
95 cd05052 PTKc_Abl Catalytic dom 100.0 5.7E-42 1.2E-46 309.4 23.9 256 72-358 6-262 (263)
96 cd05091 PTKc_Ror2 Catalytic do 100.0 2.7E-42 5.9E-47 314.9 21.9 262 72-357 5-282 (283)
97 cd05103 PTKc_VEGFR2 Catalytic 100.0 2.4E-42 5.1E-47 323.8 22.0 268 72-361 7-342 (343)
98 cd05594 STKc_PKB_alpha Catalyt 100.0 3.1E-43 6.7E-48 327.5 15.9 246 78-357 1-255 (325)
99 cd05573 STKc_ROCK_NDR_like Cat 100.0 3.3E-43 7.2E-48 330.8 16.3 256 72-357 1-288 (350)
100 cd05598 STKc_LATS Catalytic do 100.0 3.2E-43 6.8E-48 334.0 16.0 256 72-357 1-304 (376)
101 cd05625 STKc_LATS1 Catalytic d 100.0 5.8E-43 1.2E-47 332.8 17.7 255 73-357 2-308 (382)
102 cd05590 STKc_nPKC_eta Catalyti 100.0 8.7E-43 1.9E-47 323.6 18.4 246 78-357 1-256 (320)
103 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 3.3E-42 7.1E-47 314.4 21.9 277 72-359 3-282 (283)
104 cd05592 STKc_nPKC_theta_delta 100.0 1.3E-42 2.8E-47 321.9 19.3 245 78-356 1-250 (316)
105 cd05033 PTKc_EphR Catalytic do 100.0 9.6E-42 2.1E-46 308.5 24.3 260 72-358 4-265 (266)
106 cd07863 STKc_CDK4 Catalytic do 100.0 4.2E-42 9.1E-47 314.4 22.2 272 73-356 1-287 (288)
107 KOG4257 Focal adhesion tyrosin 100.0 1.5E-42 3.4E-47 321.9 19.0 267 73-367 390-658 (974)
108 PTZ00284 protein kinase; Provi 100.0 4.1E-42 9E-47 334.9 22.8 274 66-359 123-443 (467)
109 cd05591 STKc_nPKC_epsilon Cata 100.0 1.2E-42 2.6E-47 323.0 18.0 246 78-357 1-257 (321)
110 cd07853 STKc_NLK Catalytic dom 100.0 3.6E-42 7.9E-47 326.2 21.5 275 73-359 1-293 (372)
111 cd05090 PTKc_Ror1 Catalytic do 100.0 1.1E-41 2.4E-46 310.9 23.9 261 72-357 5-282 (283)
112 cd05036 PTKc_ALK_LTK Catalytic 100.0 1.3E-41 2.7E-46 309.6 24.0 262 71-356 5-276 (277)
113 cd05098 PTKc_FGFR1 Catalytic d 100.0 1.2E-41 2.6E-46 314.4 24.1 268 72-363 18-304 (307)
114 cd05596 STKc_ROCK Catalytic do 100.0 1.8E-42 3.8E-47 327.6 19.0 258 70-357 41-307 (370)
115 cd05608 STKc_GRK1 Catalytic do 100.0 5E-42 1.1E-46 312.7 21.2 250 80-358 1-261 (280)
116 cd07876 STKc_JNK2 Catalytic do 100.0 1.7E-41 3.7E-46 320.1 25.4 274 70-359 19-320 (359)
117 cd05072 PTKc_Lyn Catalytic dom 100.0 8E-42 1.7E-46 308.1 22.1 254 72-357 6-260 (261)
118 cd07872 STKc_PCTAIRE2 Catalyti 100.0 6.5E-42 1.4E-46 316.4 22.0 272 72-359 6-291 (309)
119 cd05620 STKc_nPKC_delta Cataly 100.0 1.9E-42 4E-47 320.8 18.4 246 78-357 1-251 (316)
120 cd05570 STKc_PKC Catalytic dom 100.0 2.2E-42 4.8E-47 320.7 18.9 246 78-357 1-255 (318)
121 cd05148 PTKc_Srm_Brk Catalytic 100.0 6.4E-42 1.4E-46 308.6 21.3 255 71-357 5-260 (261)
122 cd05107 PTKc_PDGFR_beta Cataly 100.0 6.5E-42 1.4E-46 325.4 22.1 266 71-359 36-400 (401)
123 cd05588 STKc_aPKC Catalytic do 100.0 2.6E-42 5.6E-47 321.7 18.9 249 78-357 1-265 (329)
124 cd05616 STKc_cPKC_beta Catalyt 100.0 2.5E-42 5.4E-47 321.1 18.7 250 73-356 1-259 (323)
125 cd05619 STKc_nPKC_theta Cataly 100.0 3.8E-42 8.3E-47 318.6 19.9 245 78-356 1-250 (316)
126 cd05621 STKc_ROCK2 Catalytic d 100.0 2.4E-42 5.2E-47 326.4 18.8 262 67-358 38-308 (370)
127 cd05601 STKc_CRIK Catalytic do 100.0 9.3E-43 2E-47 325.1 15.8 257 72-357 1-266 (330)
128 cd07874 STKc_JNK3 Catalytic do 100.0 5.7E-42 1.2E-46 322.9 21.2 274 69-358 14-315 (355)
129 cd05109 PTKc_HER2 Catalytic do 100.0 2.4E-41 5.2E-46 308.1 24.6 264 72-362 7-272 (279)
130 cd05075 PTKc_Axl Catalytic dom 100.0 2.5E-41 5.4E-46 306.7 24.3 262 74-358 1-271 (272)
131 cd05032 PTKc_InsR_like Catalyt 100.0 1.4E-41 3E-46 309.2 22.5 262 71-356 5-276 (277)
132 cd05101 PTKc_FGFR2 Catalytic d 100.0 2.6E-41 5.7E-46 311.7 24.6 268 71-362 14-300 (304)
133 cd05111 PTK_HER3 Pseudokinase 100.0 3.1E-41 6.7E-46 307.4 24.7 264 72-362 7-272 (279)
134 cd05630 STKc_GRK6 Catalytic do 100.0 1.1E-41 2.3E-46 311.3 21.5 256 73-358 1-265 (285)
135 cd05618 STKc_aPKC_iota Catalyt 100.0 3.7E-42 8E-47 320.6 18.7 253 78-357 1-265 (329)
136 PHA03207 serine/threonine kina 100.0 9.7E-42 2.1E-46 325.1 21.9 272 71-360 91-381 (392)
137 PHA03211 serine/threonine kina 100.0 1E-41 2.2E-46 327.9 22.1 267 71-357 168-458 (461)
138 cd06625 STKc_MEKK3_like Cataly 100.0 2.1E-41 4.6E-46 305.6 22.8 255 72-356 2-262 (263)
139 KOG0579 Ste20-like serine/thre 100.0 3E-43 6.5E-48 327.1 10.7 255 73-357 33-292 (1187)
140 cd05071 PTKc_Src Catalytic dom 100.0 4.3E-41 9.3E-46 303.6 24.6 255 72-359 6-261 (262)
141 cd06615 PKc_MEK Catalytic doma 100.0 2.2E-41 4.7E-46 312.8 23.1 268 72-360 1-293 (308)
142 cd05061 PTKc_InsR Catalytic do 100.0 3.9E-41 8.5E-46 308.1 24.6 266 70-359 4-279 (288)
143 cd05114 PTKc_Tec_Rlk Catalytic 100.0 3.1E-41 6.7E-46 303.4 23.4 251 72-355 4-255 (256)
144 cd07875 STKc_JNK1 Catalytic do 100.0 2.2E-41 4.8E-46 320.0 23.5 273 70-358 22-322 (364)
145 cd07868 STKc_CDK8 Catalytic do 100.0 2.5E-41 5.4E-46 313.7 23.4 269 77-356 6-316 (317)
146 cd05607 STKc_GRK7 Catalytic do 100.0 2.2E-41 4.7E-46 308.0 22.4 249 80-357 1-257 (277)
147 cd08228 STKc_Nek6 Catalytic do 100.0 5.2E-41 1.1E-45 303.8 24.6 259 72-358 2-265 (267)
148 cd05088 PTKc_Tie2 Catalytic do 100.0 2.5E-41 5.4E-46 311.6 22.8 263 71-363 6-285 (303)
149 cd06637 STKc_TNIK Catalytic do 100.0 1.6E-41 3.4E-46 308.0 21.2 261 69-356 3-271 (272)
150 cd05068 PTKc_Frk_like Catalyti 100.0 3.7E-41 8E-46 303.8 23.4 255 71-357 5-260 (261)
151 cd05575 STKc_SGK Catalytic dom 100.0 4.2E-42 9.2E-47 319.6 17.6 245 78-356 1-253 (323)
152 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 2.2E-41 4.8E-46 309.1 21.9 276 72-358 4-283 (284)
153 cd06646 STKc_MAP4K5 Catalytic 100.0 9.5E-42 2.1E-46 308.6 19.3 257 71-356 8-267 (267)
154 cd05084 PTKc_Fes Catalytic dom 100.0 4.6E-41 1E-45 301.5 23.4 248 79-356 2-251 (252)
155 cd05632 STKc_GRK5 Catalytic do 100.0 3.5E-41 7.6E-46 307.9 22.9 257 73-358 1-265 (285)
156 cd08529 STKc_FA2-like Catalyti 100.0 3.4E-41 7.4E-46 302.9 22.4 253 73-356 1-255 (256)
157 cd05116 PTKc_Syk Catalytic dom 100.0 6.4E-41 1.4E-45 301.5 24.0 249 79-357 2-254 (257)
158 PHA03209 serine/threonine kina 100.0 4.1E-41 8.9E-46 316.9 23.7 264 71-357 65-354 (357)
159 cd05615 STKc_cPKC_alpha Cataly 100.0 1.2E-41 2.7E-46 316.3 19.8 250 73-356 1-259 (323)
160 cd05099 PTKc_FGFR4 Catalytic d 100.0 7.9E-41 1.7E-45 309.9 25.0 267 72-362 12-297 (314)
161 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 6.4E-41 1.4E-45 302.0 23.6 253 72-357 6-259 (260)
162 cd05089 PTKc_Tie1 Catalytic do 100.0 8.3E-41 1.8E-45 307.3 24.7 261 72-362 2-279 (297)
163 cd05622 STKc_ROCK1 Catalytic d 100.0 9.9E-42 2.1E-46 322.4 19.0 262 66-357 37-307 (371)
164 cd05627 STKc_NDR2 Catalytic do 100.0 4.4E-42 9.5E-47 324.2 16.5 256 72-357 1-296 (360)
165 cd07878 STKc_p38beta_MAPK11 Ca 100.0 2.3E-41 4.9E-46 317.4 21.2 273 68-359 11-303 (343)
166 cd06654 STKc_PAK1 Catalytic do 100.0 4.4E-41 9.5E-46 308.9 22.6 258 71-360 19-276 (296)
167 cd07873 STKc_PCTAIRE1 Catalyti 100.0 3.9E-41 8.4E-46 310.1 22.2 271 71-358 5-290 (301)
168 cd05113 PTKc_Btk_Bmx Catalytic 100.0 7.9E-41 1.7E-45 300.8 23.6 251 72-355 4-255 (256)
169 PF00069 Pkinase: Protein kina 100.0 9.9E-42 2.1E-46 307.0 17.8 256 74-356 1-259 (260)
170 cd05602 STKc_SGK1 Catalytic do 100.0 6.2E-42 1.3E-46 318.7 16.9 245 78-356 1-253 (325)
171 cd05097 PTKc_DDR_like Catalyti 100.0 1.1E-40 2.5E-45 306.1 25.0 268 72-356 5-294 (295)
172 cd08219 STKc_Nek3 Catalytic do 100.0 6.6E-41 1.4E-45 301.0 22.6 251 73-354 1-252 (255)
173 cd05617 STKc_aPKC_zeta Catalyt 100.0 7.5E-42 1.6E-46 318.3 16.9 248 78-356 1-262 (327)
174 cd05059 PTKc_Tec_like Catalyti 100.0 7.1E-41 1.5E-45 301.1 22.7 250 73-355 5-255 (256)
175 cd05069 PTKc_Yes Catalytic dom 100.0 1.6E-40 3.4E-45 299.5 24.9 253 72-357 6-259 (260)
176 cd05082 PTKc_Csk Catalytic dom 100.0 9.8E-41 2.1E-45 300.1 23.5 249 72-357 6-255 (256)
177 cd05051 PTKc_DDR Catalytic dom 100.0 9E-41 1.9E-45 306.9 23.6 268 72-356 5-295 (296)
178 cd06645 STKc_MAP4K3 Catalytic 100.0 2.1E-41 4.4E-46 306.4 18.9 255 72-355 9-266 (267)
179 KOG0574 STE20-like serine/thre 100.0 2.5E-43 5.4E-48 301.7 5.9 251 74-356 35-285 (502)
180 cd05067 PTKc_Lck_Blk Catalytic 100.0 1E-40 2.2E-45 300.7 23.1 254 71-357 5-259 (260)
181 cd05115 PTKc_Zap-70 Catalytic 100.0 1.5E-40 3.3E-45 299.1 24.1 251 79-358 2-255 (257)
182 cd08223 STKc_Nek4 Catalytic do 100.0 9.5E-41 2.1E-45 300.3 22.6 254 73-356 1-256 (257)
183 PTZ00266 NIMA-related protein 100.0 6.5E-41 1.4E-45 338.0 23.9 262 70-358 11-299 (1021)
184 cd05035 PTKc_Axl_like Catalyti 100.0 1.5E-40 3.2E-45 301.7 24.0 263 74-358 1-272 (273)
185 cd05050 PTKc_Musk Catalytic do 100.0 1E-40 2.2E-45 305.4 23.1 262 71-356 4-287 (288)
186 cd05597 STKc_DMPK_like Catalyt 100.0 3.5E-41 7.5E-46 314.4 20.1 259 72-357 1-269 (331)
187 cd05603 STKc_SGK2 Catalytic do 100.0 1.2E-41 2.6E-46 316.3 16.8 245 78-356 1-253 (321)
188 cd06655 STKc_PAK2 Catalytic do 100.0 9.9E-41 2.1E-45 306.5 22.7 258 72-361 19-276 (296)
189 cd06619 PKc_MKK5 Catalytic dom 100.0 5.1E-41 1.1E-45 305.9 20.7 257 72-360 1-259 (279)
190 cd05043 PTK_Ryk Pseudokinase d 100.0 2.1E-40 4.6E-45 301.9 24.6 266 71-360 5-278 (280)
191 cd05582 STKc_RSK_N N-terminal 100.0 6.9E-42 1.5E-46 317.5 15.0 248 78-356 2-256 (318)
192 cd06644 STKc_STK10_LOK Catalyt 100.0 1.2E-40 2.7E-45 305.4 23.0 256 72-357 12-272 (292)
193 cd05100 PTKc_FGFR3 Catalytic d 100.0 1.7E-40 3.6E-45 310.3 24.3 267 72-362 12-297 (334)
194 PRK13184 pknD serine/threonine 100.0 1.2E-40 2.6E-45 334.8 24.8 264 72-362 2-294 (932)
195 cd05604 STKc_SGK3 Catalytic do 100.0 9E-42 1.9E-46 317.6 15.6 245 78-356 1-253 (325)
196 cd05039 PTKc_Csk_like Catalyti 100.0 1.8E-40 4E-45 298.3 23.5 249 72-357 6-255 (256)
197 cd08229 STKc_Nek7 Catalytic do 100.0 1.2E-40 2.5E-45 301.5 22.3 259 72-358 2-265 (267)
198 cd08227 PK_STRAD_alpha Pseudok 100.0 1.1E-40 2.4E-45 310.6 22.7 269 76-358 2-311 (327)
199 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 1.3E-40 2.8E-45 302.4 22.4 244 79-355 2-273 (274)
200 cd05063 PTKc_EphR_A2 Catalytic 100.0 2.9E-40 6.3E-45 299.1 24.5 260 72-358 5-267 (268)
201 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 3.4E-40 7.5E-45 298.2 24.9 259 72-359 2-266 (267)
202 cd07861 STKc_CDK1_euk Catalyti 100.0 8.9E-41 1.9E-45 305.1 21.2 268 73-356 1-284 (285)
203 cd05095 PTKc_DDR2 Catalytic do 100.0 2.6E-40 5.7E-45 303.8 24.4 268 72-356 5-295 (296)
204 KOG0604 MAP kinase-activated p 100.0 8.9E-42 1.9E-46 291.9 13.4 260 71-359 60-327 (400)
205 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 6E-41 1.3E-45 306.2 19.8 275 73-358 5-283 (284)
206 cd05057 PTKc_EGFR_like Catalyt 100.0 5.1E-40 1.1E-44 299.3 25.8 263 72-361 7-271 (279)
207 cd05110 PTKc_HER4 Catalytic do 100.0 3.3E-40 7.1E-45 304.2 24.8 264 72-362 7-272 (303)
208 cd00192 PTKc Catalytic domain 100.0 2.5E-40 5.5E-45 297.8 23.5 253 78-356 1-262 (262)
209 cd05056 PTKc_FAK Catalytic dom 100.0 2.7E-40 5.9E-45 299.6 23.9 261 72-361 6-268 (270)
210 cd05034 PTKc_Src_like Catalyti 100.0 2.5E-40 5.4E-45 298.3 23.4 255 71-357 5-260 (261)
211 cd06656 STKc_PAK3 Catalytic do 100.0 1.1E-40 2.4E-45 306.4 21.4 258 70-359 17-274 (297)
212 cd06613 STKc_MAP4K3_like Catal 100.0 3.2E-40 6.9E-45 297.6 23.9 256 72-355 3-261 (262)
213 cd07867 STKc_CDC2L6 Catalytic 100.0 1.8E-40 3.9E-45 307.9 22.8 268 78-356 7-316 (317)
214 cd05066 PTKc_EphR_A Catalytic 100.0 3.4E-40 7.3E-45 298.5 24.0 260 72-358 4-266 (267)
215 cd05065 PTKc_EphR_B Catalytic 100.0 2.7E-40 5.8E-45 299.5 23.4 260 72-358 4-268 (269)
216 KOG0577 Serine/threonine prote 100.0 5E-42 1.1E-46 316.8 12.1 247 74-356 28-280 (948)
217 cd06636 STKc_MAP4K4_6 Catalyti 100.0 1E-40 2.2E-45 304.3 20.7 266 64-356 8-281 (282)
218 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 2.6E-40 5.6E-45 298.4 23.0 245 79-356 2-262 (262)
219 KOG1094 Discoidin domain recep 100.0 8.2E-41 1.8E-45 308.5 19.9 265 71-358 537-804 (807)
220 cd08221 STKc_Nek9 Catalytic do 100.0 2.7E-40 5.9E-45 297.1 23.0 253 73-356 1-255 (256)
221 cd05046 PTK_CCK4 Pseudokinase 100.0 2.9E-40 6.3E-45 300.2 23.1 261 72-356 5-274 (275)
222 cd06643 STKc_SLK Catalytic dom 100.0 1.9E-40 4E-45 302.7 21.9 256 74-359 7-267 (282)
223 cd06628 STKc_MAPKKK_Byr2_like 100.0 2.1E-40 4.6E-45 299.7 21.9 253 73-356 1-266 (267)
224 cd05040 PTKc_Ack_like Catalyti 100.0 5.4E-40 1.2E-44 295.4 24.3 253 78-356 1-256 (257)
225 cd05060 PTKc_Syk_like Catalyti 100.0 1.2E-40 2.6E-45 299.8 20.0 253 78-359 1-256 (257)
226 cd06611 STKc_SLK_like Catalyti 100.0 1.2E-40 2.6E-45 303.6 20.3 258 71-358 4-266 (280)
227 cd05574 STKc_phototropin_like 100.0 1.5E-40 3.1E-45 308.4 21.1 259 72-358 1-293 (316)
228 cd05058 PTKc_Met_Ron Catalytic 100.0 6.7E-40 1.5E-44 295.6 24.6 257 78-360 1-261 (262)
229 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 9.6E-40 2.1E-44 295.9 25.3 255 79-356 2-268 (269)
230 cd06609 STKc_MST3_like Catalyt 100.0 2.3E-40 5E-45 300.8 21.2 254 72-359 1-256 (274)
231 cd07847 STKc_CDKL1_4 Catalytic 100.0 3.1E-40 6.7E-45 301.7 22.2 269 72-356 1-285 (286)
232 cd06612 STKc_MST1_2 Catalytic 100.0 2.1E-40 4.6E-45 297.7 20.6 253 72-356 3-255 (256)
233 cd05623 STKc_MRCK_alpha Cataly 100.0 1.4E-40 3E-45 310.5 20.1 259 72-357 1-269 (332)
234 PHA03210 serine/threonine kina 100.0 1.5E-40 3.4E-45 325.3 21.3 280 69-358 145-458 (501)
235 cd06624 STKc_ASK Catalytic dom 100.0 3.9E-40 8.4E-45 298.3 22.0 258 69-356 5-267 (268)
236 cd06651 STKc_MEKK3 Catalytic d 100.0 2.6E-40 5.5E-45 299.2 20.7 257 72-357 2-264 (266)
237 cd05624 STKc_MRCK_beta Catalyt 100.0 8.1E-41 1.8E-45 311.9 17.8 259 72-357 1-269 (331)
238 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 5E-40 1.1E-44 300.4 22.5 260 72-360 1-268 (286)
239 KOG0983 Mitogen-activated prot 100.0 8.5E-41 1.9E-45 282.6 15.8 255 72-356 92-351 (391)
240 cd06638 STKc_myosinIIIA Cataly 100.0 2.1E-40 4.6E-45 302.9 19.8 266 65-356 11-285 (286)
241 cd07832 STKc_CCRK Catalytic do 100.0 5.9E-40 1.3E-44 299.8 22.6 267 73-356 1-284 (286)
242 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 3.6E-40 7.8E-45 301.1 21.1 263 71-360 4-272 (284)
243 cd05042 PTKc_Aatyk Catalytic d 100.0 1.6E-39 3.5E-44 294.4 25.2 254 79-355 2-267 (269)
244 KOG4278 Protein tyrosine kinas 100.0 4.4E-41 9.5E-46 312.2 15.0 261 71-362 266-527 (1157)
245 cd05047 PTKc_Tie Catalytic dom 100.0 1.3E-39 2.7E-44 295.3 24.2 251 79-359 2-269 (270)
246 cd05586 STKc_Sck1_like Catalyt 100.0 3.1E-41 6.8E-46 314.7 14.0 245 80-357 1-256 (330)
247 cd06608 STKc_myosinIII_like Ca 100.0 3.2E-40 6.9E-45 299.6 20.2 261 70-356 4-274 (275)
248 cd08218 STKc_Nek1 Catalytic do 100.0 5E-40 1.1E-44 295.5 21.2 253 73-356 1-255 (256)
249 KOG0586 Serine/threonine prote 100.0 5.7E-41 1.2E-45 312.8 15.3 256 71-363 55-315 (596)
250 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 3.1E-40 6.6E-45 301.3 20.0 266 72-358 4-283 (284)
251 cd06639 STKc_myosinIIIB Cataly 100.0 4.9E-40 1.1E-44 301.3 21.3 270 62-357 12-290 (291)
252 cd06652 STKc_MEKK2 Catalytic d 100.0 4.3E-40 9.4E-45 297.5 20.6 256 72-356 2-263 (265)
253 cd06631 STKc_YSK4 Catalytic do 100.0 5.6E-40 1.2E-44 296.7 21.4 254 73-356 1-264 (265)
254 cd05083 PTKc_Chk Catalytic dom 100.0 8.1E-40 1.8E-44 293.8 22.2 246 72-356 6-252 (254)
255 KOG0986 G protein-coupled rece 100.0 2.2E-41 4.7E-46 304.1 11.8 255 71-355 184-447 (591)
256 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 2.2E-40 4.7E-45 298.3 18.4 244 79-355 2-257 (258)
257 cd06640 STKc_MST4 Catalytic do 100.0 1.3E-39 2.9E-44 296.2 23.7 255 72-360 4-259 (277)
258 cd06658 STKc_PAK5 Catalytic do 100.0 2.8E-40 6.1E-45 303.0 19.4 255 74-360 24-278 (292)
259 smart00219 TyrKc Tyrosine kina 100.0 1.7E-39 3.6E-44 292.1 24.0 256 74-355 1-258 (258)
260 cd05073 PTKc_Hck Catalytic dom 100.0 1.3E-39 2.8E-44 293.6 23.3 254 71-357 5-259 (260)
261 cd05580 STKc_PKA Catalytic dom 100.0 4.9E-40 1.1E-44 301.1 20.8 248 72-356 1-256 (290)
262 cd05044 PTKc_c-ros Catalytic d 100.0 7.6E-40 1.6E-44 296.5 21.8 254 79-356 2-268 (269)
263 cd07839 STKc_CDK5 Catalytic do 100.0 4.1E-40 8.8E-45 300.7 20.1 267 73-356 1-283 (284)
264 cd06642 STKc_STK25-YSK1 Cataly 100.0 3.6E-40 7.7E-45 300.0 19.6 253 73-359 5-258 (277)
265 cd08217 STKc_Nek2 Catalytic do 100.0 1.4E-39 3E-44 293.6 23.3 254 73-355 1-263 (265)
266 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 2.2E-39 4.8E-44 296.4 24.7 264 72-357 1-269 (287)
267 cd05041 PTKc_Fes_like Catalyti 100.0 2.1E-39 4.5E-44 290.5 24.0 248 78-356 1-250 (251)
268 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 2.1E-39 4.6E-44 291.7 23.9 243 78-355 1-258 (259)
269 KOG4250 TANK binding protein k 100.0 1.2E-40 2.7E-45 314.7 16.3 279 74-363 15-315 (732)
270 cd08220 STKc_Nek8 Catalytic do 100.0 1.4E-39 3.1E-44 292.4 22.5 251 73-355 1-254 (256)
271 cd06629 STKc_MAPKKK_Bck1_like 100.0 1E-39 2.2E-44 296.2 21.5 258 73-356 2-271 (272)
272 cd07833 STKc_CDKL Catalytic do 100.0 6.8E-40 1.5E-44 299.7 20.5 270 72-356 1-287 (288)
273 cd06610 STKc_OSR1_SPAK Catalyt 100.0 1.1E-39 2.4E-44 294.8 21.7 260 72-356 1-266 (267)
274 KOG0196 Tyrosine kinase, EPH ( 100.0 3.6E-41 7.9E-46 320.1 12.3 265 72-363 629-896 (996)
275 cd07850 STKc_JNK Catalytic dom 100.0 2.4E-39 5.2E-44 304.8 24.7 273 70-358 14-315 (353)
276 cd05085 PTKc_Fer Catalytic dom 100.0 2.8E-39 6.2E-44 289.5 24.0 246 79-356 2-249 (250)
277 cd07841 STKc_CDK7 Catalytic do 100.0 1.7E-39 3.7E-44 298.7 23.0 269 73-358 1-286 (298)
278 KOG0596 Dual specificity; seri 100.0 4.4E-41 9.4E-46 308.9 12.0 257 72-359 361-632 (677)
279 cd07860 STKc_CDK2_3 Catalytic 100.0 8.4E-40 1.8E-44 298.6 20.4 266 73-356 1-283 (284)
280 KOG4279 Serine/threonine prote 100.0 7.5E-41 1.6E-45 314.0 13.6 252 79-360 582-838 (1226)
281 cd07846 STKc_CDKL2_3 Catalytic 100.0 4E-40 8.8E-45 300.9 18.2 269 72-356 1-285 (286)
282 cd07844 STKc_PCTAIRE_like Cata 100.0 1.7E-39 3.7E-44 297.7 22.3 269 71-356 4-290 (291)
283 cd06659 STKc_PAK6 Catalytic do 100.0 7.4E-40 1.6E-44 300.9 19.7 254 74-359 23-276 (297)
284 cd06605 PKc_MAPKK Catalytic do 100.0 6.7E-40 1.5E-44 296.1 19.1 258 72-358 1-261 (265)
285 cd05609 STKc_MAST Catalytic do 100.0 1.9E-39 4.1E-44 299.4 22.4 257 72-357 1-276 (305)
286 cd06647 STKc_PAK_I Catalytic d 100.0 1.4E-39 3.1E-44 298.4 21.0 259 71-361 18-276 (293)
287 cd06632 STKc_MEKK1_plant Catal 100.0 2.7E-39 5.7E-44 290.8 22.3 251 73-356 1-257 (258)
288 cd06630 STKc_MEKK1 Catalytic d 100.0 1.8E-39 3.8E-44 293.8 21.3 257 73-356 1-266 (268)
289 KOG0199 ACK and related non-re 100.0 1.3E-40 2.8E-45 312.7 14.1 258 74-358 112-372 (1039)
290 KOG0690 Serine/threonine prote 100.0 5.2E-41 1.1E-45 290.3 10.5 251 71-355 167-425 (516)
291 cd05086 PTKc_Aatyk2 Catalytic 100.0 1.1E-38 2.4E-43 288.8 26.3 255 79-356 2-267 (268)
292 cd07870 STKc_PFTAIRE2 Catalyti 100.0 3E-39 6.5E-44 296.1 22.4 270 71-356 4-290 (291)
293 cd07855 STKc_ERK5 Catalytic do 100.0 1.2E-39 2.6E-44 304.6 19.8 279 71-360 4-300 (334)
294 cd05112 PTKc_Itk Catalytic dom 100.0 5E-39 1.1E-43 288.9 23.0 251 72-355 4-255 (256)
295 KOG0666 Cyclin C-dependent kin 100.0 7.1E-41 1.5E-45 287.7 10.4 282 71-360 23-343 (438)
296 cd05578 STKc_Yank1 Catalytic d 100.0 6.5E-40 1.4E-44 295.1 17.2 252 73-356 1-257 (258)
297 cd07845 STKc_CDK10 Catalytic d 100.0 3.7E-39 8.1E-44 298.0 22.7 274 71-358 6-294 (309)
298 cd07843 STKc_CDC2L1 Catalytic 100.0 2.4E-39 5.3E-44 297.0 21.2 271 72-356 5-292 (293)
299 cd06623 PKc_MAPKK_plant_like C 100.0 5.2E-39 1.1E-43 290.0 22.9 257 72-358 1-260 (264)
300 cd06648 STKc_PAK_II Catalytic 100.0 4.3E-39 9.3E-44 294.1 22.1 255 73-359 20-274 (285)
301 cd05074 PTKc_Tyro3 Catalytic d 100.0 1.1E-38 2.4E-43 289.4 24.4 263 74-358 1-272 (273)
302 cd05577 STKc_GRK Catalytic dom 100.0 3.5E-39 7.5E-44 293.5 20.9 250 80-358 1-258 (277)
303 cd06626 STKc_MEKK4 Catalytic d 100.0 7.6E-39 1.6E-43 289.0 22.9 256 73-356 1-263 (264)
304 cd07842 STKc_CDK8_like Catalyt 100.0 4.2E-39 9E-44 298.5 21.4 275 73-356 1-315 (316)
305 cd06641 STKc_MST3 Catalytic do 100.0 1.1E-38 2.5E-43 290.1 23.8 254 73-360 5-259 (277)
306 cd06617 PKc_MKK3_6 Catalytic d 100.0 7.7E-39 1.7E-43 292.0 22.3 259 72-360 1-267 (283)
307 PHA02882 putative serine/threo 100.0 1.2E-38 2.7E-43 292.4 23.5 263 72-355 12-293 (294)
308 cd07835 STKc_CDK1_like Catalyt 100.0 5.6E-39 1.2E-43 293.0 21.1 266 74-356 1-282 (283)
309 PLN00009 cyclin-dependent kina 100.0 1E-38 2.2E-43 293.0 22.9 272 72-358 2-288 (294)
310 cd08528 STKc_Nek10 Catalytic d 100.0 2.1E-38 4.6E-43 287.0 24.7 254 73-356 1-268 (269)
311 cd07849 STKc_ERK1_2_like Catal 100.0 2.9E-39 6.4E-44 302.2 19.6 275 71-358 4-296 (336)
312 cd06614 STKc_PAK Catalytic dom 100.0 1E-38 2.2E-43 291.9 22.7 260 69-359 16-275 (286)
313 cd05572 STKc_cGK_PKG Catalytic 100.0 6.6E-39 1.4E-43 289.2 21.1 248 80-358 1-256 (262)
314 cd07858 STKc_TEY_MAPK_plant Ca 100.0 2.8E-39 6E-44 302.4 19.2 274 71-358 4-295 (337)
315 cd06917 STKc_NAK1_like Catalyt 100.0 9.5E-39 2.1E-43 290.6 22.1 253 73-358 2-259 (277)
316 cd07837 STKc_CdkB_plant Cataly 100.0 9.5E-39 2.1E-43 293.2 22.3 272 72-356 1-293 (295)
317 cd08225 STKc_Nek5 Catalytic do 100.0 4.9E-39 1.1E-43 289.0 19.9 253 73-356 1-256 (257)
318 cd05122 PKc_STE Catalytic doma 100.0 1.3E-38 2.9E-43 284.9 22.4 253 73-356 1-253 (253)
319 cd07852 STKc_MAPK15 Catalytic 100.0 1.3E-38 2.8E-43 298.0 22.9 275 70-358 5-299 (337)
320 cd07836 STKc_Pho85 Catalytic d 100.0 1.3E-38 2.8E-43 290.7 22.3 268 73-356 1-283 (284)
321 cd07831 STKc_MOK Catalytic dom 100.0 1.4E-38 3.1E-43 290.0 22.4 266 74-356 1-281 (282)
322 cd08226 PK_STRAD_beta Pseudoki 100.0 1.7E-38 3.7E-43 296.1 23.2 269 79-361 5-315 (328)
323 KOG0671 LAMMER dual specificit 100.0 4.9E-40 1.1E-44 290.1 11.8 270 71-359 88-411 (415)
324 cd06606 STKc_MAPKKK Catalytic 100.0 1.5E-38 3.2E-43 285.7 21.7 257 73-356 1-259 (260)
325 cd07865 STKc_CDK9 Catalytic do 100.0 1.5E-38 3.2E-43 294.0 22.3 276 71-356 11-309 (310)
326 cd05633 STKc_GRK3 Catalytic do 100.0 1E-38 2.2E-43 290.7 20.7 247 79-358 1-259 (279)
327 cd06607 STKc_TAO Catalytic dom 100.0 2.1E-38 4.6E-43 292.7 22.8 252 72-359 15-272 (307)
328 cd06657 STKc_PAK4 Catalytic do 100.0 1.5E-38 3.3E-43 291.4 21.4 254 76-361 24-277 (292)
329 cd06653 STKc_MEKK3_like_1 Cata 100.0 1E-38 2.3E-43 288.3 19.8 255 72-355 2-262 (264)
330 cd07834 STKc_MAPK Catalytic do 100.0 1.4E-38 3E-43 297.0 21.0 279 73-362 1-297 (330)
331 cd06635 STKc_TAO1 Catalytic do 100.0 5.9E-38 1.3E-42 291.0 25.0 256 73-364 26-287 (317)
332 cd08215 STKc_Nek Catalytic dom 100.0 2.4E-38 5.2E-43 284.3 21.3 253 73-356 1-257 (258)
333 cd07857 STKc_MPK1 Catalytic do 100.0 3.1E-38 6.7E-43 294.8 22.7 277 73-360 1-298 (332)
334 KOG4645 MAPKKK (MAP kinase kin 100.0 1.5E-40 3.2E-45 331.0 7.4 258 68-355 1231-1495(1509)
335 cd06616 PKc_MKK4 Catalytic dom 100.0 8.8E-39 1.9E-43 292.5 18.6 259 73-358 5-271 (288)
336 cd05118 STKc_CMGC Catalytic do 100.0 2.1E-38 4.5E-43 289.1 21.0 267 74-356 1-282 (283)
337 KOG0607 MAP kinase-interacting 100.0 3E-39 6.5E-44 278.7 14.4 263 78-365 84-372 (463)
338 KOG0662 Cyclin-dependent kinas 100.0 6.8E-39 1.5E-43 255.4 15.3 269 73-357 3-286 (292)
339 KOG0669 Cyclin T-dependent kin 100.0 2.7E-41 5.8E-46 282.6 1.6 278 72-359 17-320 (376)
340 cd07854 STKc_MAPK4_6 Catalytic 100.0 8.5E-39 1.8E-43 299.7 18.1 274 71-358 4-304 (342)
341 cd07840 STKc_CDK9_like Catalyt 100.0 2.7E-38 5.9E-43 288.8 21.0 270 74-356 1-286 (287)
342 PHA03390 pk1 serine/threonine- 100.0 7.1E-38 1.5E-42 283.3 22.7 252 67-357 9-265 (267)
343 cd08530 STKc_CNK2-like Catalyt 100.0 4.9E-38 1.1E-42 282.3 21.1 250 73-355 1-254 (256)
344 KOG0612 Rho-associated, coiled 100.0 1.6E-39 3.4E-44 319.9 12.0 285 66-381 69-367 (1317)
345 cd06627 STKc_Cdc7_like Catalyt 100.0 8.6E-38 1.9E-42 280.3 22.2 250 73-355 1-252 (254)
346 cd08216 PK_STRAD Pseudokinase 100.0 1.3E-37 2.8E-42 288.4 23.8 265 78-358 8-299 (314)
347 PTZ00024 cyclin-dependent prot 100.0 5.8E-38 1.3E-42 293.4 21.6 269 72-358 8-317 (335)
348 cd07866 STKc_BUR1 Catalytic do 100.0 3.7E-38 8.1E-43 291.4 20.0 275 71-356 7-310 (311)
349 cd07864 STKc_CDK12 Catalytic d 100.0 8E-38 1.7E-42 288.1 22.1 275 70-356 5-301 (302)
350 cd07838 STKc_CDK4_6_like Catal 100.0 1.5E-37 3.2E-42 284.0 23.5 269 74-356 1-286 (287)
351 cd05581 STKc_PDK1 Catalytic do 100.0 2.1E-38 4.5E-43 288.5 17.7 253 72-356 1-279 (280)
352 KOG0584 Serine/threonine prote 100.0 3.1E-39 6.8E-44 301.6 12.2 252 78-360 46-302 (632)
353 cd05606 STKc_beta_ARK Catalyti 100.0 8.6E-38 1.9E-42 284.5 21.5 247 79-358 1-259 (278)
354 cd05611 STKc_Rim15_like Cataly 100.0 9.1E-38 2E-42 281.5 21.1 246 78-357 2-254 (260)
355 KOG1290 Serine/threonine prote 100.0 7.5E-38 1.6E-42 283.7 20.0 273 72-358 78-554 (590)
356 cd07830 STKc_MAK_like Catalyti 100.0 8.8E-38 1.9E-42 285.0 20.7 267 74-356 1-282 (283)
357 KOG4236 Serine/threonine prote 100.0 3E-39 6.5E-44 295.0 10.2 249 77-357 569-822 (888)
358 cd05579 STKc_MAST_like Catalyt 100.0 7.2E-38 1.6E-42 282.4 19.2 248 80-357 1-260 (265)
359 cd07877 STKc_p38alpha_MAPK14 C 100.0 1.1E-37 2.5E-42 292.3 21.2 277 64-358 9-304 (345)
360 KOG1151 Tousled-like protein k 100.0 3.3E-39 7.2E-44 289.4 10.0 270 71-363 462-750 (775)
361 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 1.8E-37 3.9E-42 288.9 21.9 270 69-358 7-292 (328)
362 cd07880 STKc_p38gamma_MAPK12 C 100.0 1.2E-37 2.5E-42 292.0 20.7 274 67-359 10-303 (343)
363 cd06634 STKc_TAO2 Catalytic do 100.0 2.3E-37 4.9E-42 285.9 21.7 253 72-360 15-273 (308)
364 cd07879 STKc_p38delta_MAPK13 C 100.0 1.9E-37 4.1E-42 290.6 21.3 267 71-357 14-300 (342)
365 cd06618 PKc_MKK7 Catalytic dom 100.0 2.8E-37 6.2E-42 283.7 21.9 258 71-359 14-278 (296)
366 cd08222 STKc_Nek11 Catalytic d 100.0 2E-37 4.4E-42 279.2 19.9 252 73-356 1-259 (260)
367 cd07829 STKc_CDK_like Catalyti 100.0 3E-37 6.4E-42 281.3 20.8 266 74-356 1-281 (282)
368 KOG3653 Transforming growth fa 100.0 7E-38 1.5E-42 283.2 16.3 280 72-364 210-509 (534)
369 PLN00113 leucine-rich repeat r 100.0 9E-37 1.9E-41 322.7 27.4 266 68-360 686-953 (968)
370 cd06633 STKc_TAO3 Catalytic do 100.0 1.1E-36 2.3E-41 282.0 24.4 249 74-358 23-277 (313)
371 KOG0603 Ribosomal protein S6 k 100.0 7.5E-38 1.6E-42 293.5 16.7 245 70-357 320-566 (612)
372 cd05613 STKc_MSK1_N N-terminal 100.0 4.5E-37 9.7E-42 281.5 21.2 260 73-359 1-273 (290)
373 cd05583 STKc_MSK_N N-terminal 100.0 6.1E-37 1.3E-41 280.3 21.1 257 73-356 1-268 (288)
374 cd07851 STKc_p38 Catalytic dom 100.0 1.5E-37 3.2E-42 291.4 17.1 272 69-359 12-303 (343)
375 KOG1035 eIF-2alpha kinase GCN2 100.0 2.4E-37 5.1E-42 306.8 17.7 258 69-354 476-871 (1351)
376 KOG1006 Mitogen-activated prot 100.0 6.2E-39 1.4E-43 270.3 5.6 256 75-356 67-329 (361)
377 cd05610 STKc_MASTL Catalytic d 100.0 1.7E-36 3.7E-41 305.7 23.4 147 71-231 3-152 (669)
378 KOG0587 Traf2- and Nck-interac 100.0 4.7E-37 1E-41 295.9 17.8 261 69-355 16-283 (953)
379 KOG2052 Activin A type IB rece 100.0 1.3E-36 2.8E-41 273.0 19.4 266 68-360 207-505 (513)
380 cd05123 STKc_AGC Catalytic dom 100.0 1.2E-36 2.5E-41 272.4 19.0 243 80-356 1-249 (250)
381 KOG1025 Epidermal growth facto 100.0 5.4E-37 1.2E-41 292.9 16.0 263 74-363 698-962 (1177)
382 KOG0696 Serine/threonine prote 100.0 3.2E-37 6.9E-42 274.4 12.9 242 72-347 349-594 (683)
383 KOG0200 Fibroblast/platelet-de 100.0 2.1E-36 4.6E-41 300.7 19.9 266 72-361 296-582 (609)
384 cd05576 STKc_RPK118_like Catal 100.0 1.2E-36 2.6E-41 270.4 16.2 228 83-356 4-236 (237)
385 KOG1024 Receptor-like protein 100.0 1.2E-36 2.6E-41 269.1 15.8 271 65-358 277-555 (563)
386 KOG0668 Casein kinase II, alph 100.0 9.9E-37 2.2E-41 251.8 11.5 268 71-359 37-327 (338)
387 KOG0614 cGMP-dependent protein 100.0 7.9E-37 1.7E-41 278.1 8.0 255 71-358 419-681 (732)
388 KOG0608 Warts/lats-like serine 100.0 4.3E-36 9.3E-41 279.6 12.4 254 73-356 630-930 (1034)
389 PLN03225 Serine/threonine-prot 100.0 9.4E-36 2E-40 293.4 15.6 277 70-359 130-455 (566)
390 PLN03224 probable serine/threo 100.0 2E-34 4.3E-39 277.3 19.9 273 71-358 144-504 (507)
391 KOG0695 Serine/threonine prote 100.0 4.6E-35 1E-39 254.5 12.9 253 71-354 249-516 (593)
392 KOG0664 Nemo-like MAPK-related 100.0 2.2E-36 4.8E-41 255.9 3.4 273 74-358 55-347 (449)
393 smart00220 S_TKc Serine/Threon 100.0 1.4E-33 3.1E-38 250.6 19.8 242 84-356 1-243 (244)
394 KOG0984 Mitogen-activated prot 100.0 1.1E-34 2.3E-39 236.3 11.3 210 70-294 44-261 (282)
395 KOG0670 U4/U6-associated splic 100.0 1.4E-34 3.1E-39 264.1 8.5 278 62-357 422-749 (752)
396 KOG0665 Jun-N-terminal kinase 100.0 1.9E-33 4.1E-38 243.1 10.7 269 72-357 17-313 (369)
397 KOG1027 Serine/threonine prote 100.0 6.3E-34 1.4E-38 273.2 7.9 245 76-355 513-768 (903)
398 KOG0576 Mitogen-activated prot 100.0 1.1E-32 2.4E-37 258.5 6.4 255 71-354 14-271 (829)
399 KOG1152 Signal transduction se 100.0 3.2E-32 7E-37 251.6 9.1 198 71-286 560-770 (772)
400 cd00180 PKc Catalytic domain o 100.0 3.4E-30 7.3E-35 223.5 21.1 212 80-355 1-215 (215)
401 KOG1345 Serine/threonine kinas 100.0 1.3E-31 2.7E-36 226.8 10.9 257 70-357 22-290 (378)
402 KOG1167 Serine/threonine prote 100.0 1.2E-31 2.6E-36 240.2 10.9 274 67-356 31-383 (418)
403 smart00221 STYKc Protein kinas 100.0 6.3E-29 1.4E-33 218.3 20.0 200 74-287 1-202 (225)
404 PLN00181 protein SPA1-RELATED; 100.0 9.8E-30 2.1E-34 262.6 11.1 205 130-358 28-269 (793)
405 smart00750 KIND kinase non-cat 100.0 4.1E-28 9E-33 205.3 17.0 170 163-361 1-172 (176)
406 KOG1164 Casein kinase (serine/ 99.9 4.9E-26 1.1E-30 210.9 22.9 264 73-362 19-301 (322)
407 KOG1165 Casein kinase (serine/ 99.9 3.4E-25 7.3E-30 193.0 17.0 264 73-362 29-303 (449)
408 KOG0590 Checkpoint kinase and 99.9 8.5E-27 1.8E-31 229.3 7.9 264 75-358 321-589 (601)
409 KOG1163 Casein kinase (serine/ 99.9 2.6E-25 5.7E-30 185.7 13.6 261 71-357 14-283 (341)
410 PRK09188 serine/threonine prot 99.9 3.9E-25 8.5E-30 204.5 15.2 168 69-260 15-195 (365)
411 COG0515 SPS1 Serine/threonine 99.9 1.9E-23 4E-28 193.8 23.6 260 74-354 2-275 (384)
412 KOG0195 Integrin-linked kinase 99.9 3.2E-25 6.9E-30 188.3 7.4 250 73-359 191-447 (448)
413 PRK10359 lipopolysaccharide co 99.9 5.5E-24 1.2E-28 183.3 10.3 176 70-280 29-217 (232)
414 KOG1240 Protein kinase contain 99.9 1.6E-23 3.4E-28 207.2 7.0 247 73-354 24-291 (1431)
415 cd05147 RIO1_euk RIO kinase fa 99.9 1.4E-22 3.1E-27 172.6 11.0 139 77-233 2-167 (190)
416 cd05145 RIO1_like RIO kinase f 99.9 1.7E-21 3.8E-26 166.5 14.1 140 77-234 2-168 (190)
417 KOG1166 Mitotic checkpoint ser 99.9 1.9E-21 4.1E-26 195.5 16.2 253 67-361 693-956 (974)
418 PF14531 Kinase-like: Kinase-l 99.9 2.1E-21 4.5E-26 172.4 14.5 236 74-345 14-288 (288)
419 KOG0603 Ribosomal protein S6 k 99.9 3.8E-23 8.3E-28 194.8 3.4 229 79-348 1-232 (612)
420 KOG4158 BRPK/PTEN-induced prot 99.9 7E-22 1.5E-26 176.3 10.7 205 132-359 274-515 (598)
421 PRK10345 hypothetical protein; 99.9 5.8E-21 1.3E-25 164.2 14.3 141 74-230 4-156 (210)
422 PRK12274 serine/threonine prot 99.9 1.5E-20 3.3E-25 158.6 14.7 186 76-288 6-210 (218)
423 KOG1023 Natriuretic peptide re 99.8 1.5E-20 3.2E-25 177.3 12.5 219 128-362 1-228 (484)
424 KOG1033 eIF-2alpha kinase PEK/ 99.8 2E-21 4.3E-26 179.9 4.1 178 152-355 330-513 (516)
425 KOG0606 Microtubule-associated 99.8 1.3E-20 2.9E-25 186.3 9.2 211 71-347 82-305 (1205)
426 smart00090 RIO RIO-like kinase 99.8 2.8E-19 6.1E-24 157.5 12.4 141 73-232 29-197 (237)
427 PRK14879 serine/threonine prot 99.8 1.8E-18 3.8E-23 150.8 13.9 134 78-232 2-143 (211)
428 TIGR03724 arch_bud32 Kae1-asso 99.8 2.3E-18 4.9E-23 148.6 12.8 130 79-232 1-138 (199)
429 PRK09605 bifunctional UGMP fam 99.8 5E-18 1.1E-22 167.8 14.4 136 72-232 333-476 (535)
430 cd05144 RIO2_C RIO kinase fami 99.7 2.9E-17 6.3E-22 141.5 12.7 137 73-234 16-176 (198)
431 KOG0590 Checkpoint kinase and 99.7 3.4E-19 7.3E-24 175.8 0.3 263 73-359 21-291 (601)
432 PRK01723 3-deoxy-D-manno-octul 99.7 1.8E-16 3.9E-21 140.0 13.8 138 78-232 37-191 (239)
433 cd05119 RIO RIO kinase family, 99.7 3E-16 6.4E-21 134.0 11.2 135 77-233 2-164 (187)
434 cd05120 APH_ChoK_like Aminogly 99.7 7.2E-16 1.6E-20 126.5 13.0 135 76-232 2-138 (155)
435 KOG0601 Cyclin-dependent kinas 99.6 9.8E-15 2.1E-19 138.2 11.6 253 72-354 114-379 (524)
436 KOG1266 Protein kinase [Signal 99.6 4.4E-15 9.5E-20 130.2 5.6 208 127-356 120-333 (458)
437 TIGR01982 UbiB 2-polyprenylphe 99.5 2.1E-13 4.5E-18 130.8 13.4 146 72-234 118-308 (437)
438 cd05151 ChoK Choline Kinase (C 99.4 6.3E-13 1.4E-17 111.5 10.2 130 78-232 4-136 (170)
439 PRK04750 ubiB putative ubiquin 99.4 7.3E-13 1.6E-17 128.6 11.9 149 68-235 116-316 (537)
440 KOG1243 Protein kinase [Genera 99.4 3.2E-12 6.9E-17 122.6 13.1 163 102-281 37-199 (690)
441 KOG0601 Cyclin-dependent kinas 99.3 1.3E-12 2.9E-17 123.9 6.8 250 70-358 263-518 (524)
442 cd05146 RIO3_euk RIO kinase fa 99.3 2E-11 4.4E-16 103.3 12.8 141 78-233 3-174 (197)
443 KOG3087 Serine/threonine prote 99.3 4.5E-11 9.8E-16 97.3 12.9 144 76-233 11-166 (229)
444 KOG3741 Poly(A) ribonuclease s 99.3 1.9E-10 4E-15 107.4 18.6 220 85-355 289-522 (655)
445 COG3642 Mn2+-dependent serine/ 99.3 4.7E-11 1E-15 97.7 12.5 130 79-232 3-140 (204)
446 KOG0606 Microtubule-associated 99.3 1.9E-12 4.1E-17 129.3 3.1 248 72-349 804-1084(1205)
447 COG4248 Uncharacterized protei 99.3 7.6E-10 1.6E-14 101.0 19.0 272 76-367 15-309 (637)
448 cd05154 ACAD10_11_like Acyl-Co 99.2 3.7E-10 8E-15 98.9 13.4 145 78-232 4-206 (223)
449 PRK15123 lipopolysaccharide co 99.0 4.3E-09 9.3E-14 94.1 13.6 110 120-232 74-194 (268)
450 PF01163 RIO1: RIO1 family; I 99.0 5.2E-09 1.1E-13 88.3 12.0 97 121-233 55-156 (188)
451 PRK09902 hypothetical protein; 99.0 1.2E-08 2.6E-13 86.6 13.4 143 80-232 26-179 (216)
452 PF06293 Kdo: Lipopolysacchari 99.0 1.2E-08 2.7E-13 88.1 13.7 109 119-232 56-170 (206)
453 KOG2137 Protein kinase [Signal 99.0 1.3E-10 2.8E-15 112.2 1.1 150 189-354 108-265 (700)
454 COG0478 RIO-like serine/threon 98.9 1.4E-08 3E-13 88.3 10.6 134 74-231 93-250 (304)
455 COG0661 AarF Predicted unusual 98.7 1E-07 2.2E-12 92.4 10.6 152 68-235 122-317 (517)
456 PF06176 WaaY: Lipopolysacchar 98.6 5.1E-07 1.1E-11 77.1 12.3 140 71-231 30-182 (229)
457 COG1718 RIO1 Serine/threonine 98.5 2E-06 4.4E-11 74.2 12.2 149 64-233 37-216 (268)
458 PF12260 PIP49_C: Protein-kina 98.5 4E-06 8.7E-11 71.0 13.9 102 123-232 8-111 (188)
459 COG2112 Predicted Ser/Thr prot 98.4 1.8E-06 3.9E-11 70.6 9.8 130 75-233 25-156 (201)
460 TIGR02172 Fb_sc_TIGR02172 Fibr 98.4 6.1E-06 1.3E-10 72.3 14.0 139 78-232 7-182 (226)
461 KOG1235 Predicted unusual prot 98.4 1.7E-06 3.7E-11 83.7 11.0 139 78-234 167-356 (538)
462 PF01636 APH: Phosphotransfera 98.4 1.5E-06 3.2E-11 76.6 9.7 145 77-231 2-196 (239)
463 KOG0576 Mitogen-activated prot 98.4 1.8E-08 4E-13 96.6 -3.3 190 69-285 239-430 (829)
464 KOG1035 eIF-2alpha kinase GCN2 98.4 1.1E-06 2.4E-11 90.0 8.5 202 123-359 231-439 (1351)
465 cd05150 APH Aminoglycoside 3'- 98.3 1.1E-05 2.4E-10 71.8 13.0 138 80-231 6-192 (244)
466 PLN02876 acyl-CoA dehydrogenas 98.2 4.7E-05 1E-09 79.5 15.9 153 77-233 43-258 (822)
467 PF10707 YrbL-PhoP_reg: PhoP r 98.1 0.0001 2.2E-09 62.8 13.7 128 77-226 6-165 (199)
468 cd05155 APH_ChoK_like_1 Unchar 98.1 4.1E-05 8.9E-10 67.7 11.4 31 202-232 164-194 (235)
469 TIGR02721 ycfN_thiK thiamine k 97.9 9.5E-05 2.1E-09 66.3 10.5 137 80-232 4-175 (256)
470 PRK09550 mtnK methylthioribose 97.9 0.00024 5.2E-09 67.2 13.2 77 77-164 31-117 (401)
471 PRK10593 hypothetical protein; 97.9 0.00039 8.4E-09 63.7 13.8 81 75-165 17-100 (297)
472 PF13095 FTA2: Kinetochore Sim 97.8 0.00027 5.8E-09 59.9 11.1 129 72-230 37-206 (207)
473 cd05157 ETNK_euk Ethanolamine 97.8 0.00032 7E-09 61.9 12.2 31 202-232 170-201 (235)
474 cd05153 HomoserineK_II Homoser 97.7 0.00056 1.2E-08 62.7 12.8 146 77-232 19-205 (296)
475 PRK05231 homoserine kinase; Pr 97.6 0.0027 5.9E-08 58.8 15.7 32 201-232 186-217 (319)
476 TIGR00938 thrB_alt homoserine 97.5 0.0043 9.4E-08 57.1 15.1 31 201-231 186-216 (307)
477 KOG1826 Ras GTPase activating 97.5 3.5E-05 7.7E-10 81.4 0.7 159 123-285 1278-1440(2724)
478 KOG1093 Predicted protein kina 97.3 0.0006 1.3E-08 65.0 7.2 167 118-353 26-193 (725)
479 KOG2268 Serine/threonine prote 97.3 0.00019 4E-09 64.6 3.6 134 73-231 93-250 (465)
480 PLN02756 S-methyl-5-thioribose 97.3 0.0064 1.4E-07 57.5 13.2 74 76-162 36-119 (418)
481 TIGR01767 MTRK 5-methylthiorib 97.2 0.0052 1.1E-07 57.0 11.5 31 202-233 192-222 (370)
482 COG5072 ALK1 Serine/threonine 97.2 0.0015 3.2E-08 59.9 7.7 113 149-282 297-409 (488)
483 cd05156 ChoK_euk Choline Kinas 97.2 0.0068 1.5E-07 55.7 12.4 33 200-232 177-213 (302)
484 cd05152 MPH2' Macrolide 2'-Pho 97.1 0.0071 1.5E-07 54.7 11.8 30 203-232 186-216 (276)
485 COG3173 Predicted aminoglycosi 97.1 0.0077 1.7E-07 55.1 11.9 107 119-234 66-230 (321)
486 KOG2270 Serine/threonine prote 97.1 0.0035 7.6E-08 57.6 9.5 140 76-232 148-313 (520)
487 PLN02236 choline kinase 97.0 0.011 2.5E-07 55.3 12.6 146 77-232 41-231 (344)
488 PF03881 Fructosamin_kin: Fruc 96.9 0.007 1.5E-07 54.9 9.8 75 75-163 20-97 (288)
489 PRK12396 5-methylribose kinase 96.7 0.01 2.2E-07 55.9 9.2 75 77-162 34-117 (409)
490 PLN02421 phosphotransferase, a 96.3 0.045 9.8E-07 50.9 10.8 30 203-232 183-213 (330)
491 PTZ00384 choline kinase; Provi 96.0 0.13 2.9E-06 48.7 12.4 30 202-232 227-256 (383)
492 PF07387 Seadorna_VP7: Seadorn 95.8 0.064 1.4E-06 46.1 8.4 102 105-230 88-190 (308)
493 KOG1236 Predicted unusual prot 95.5 0.064 1.4E-06 50.3 8.1 60 154-219 321-381 (565)
494 PRK06148 hypothetical protein; 95.3 0.21 4.6E-06 53.7 12.5 33 200-232 201-236 (1013)
495 PRK10271 thiK thiamine kinase; 95.0 0.022 4.8E-07 47.9 3.2 30 202-232 77-106 (188)
496 COG0510 ycfN Thiamine kinase a 95.0 0.058 1.3E-06 48.5 6.0 47 185-232 137-183 (269)
497 COG3001 Uncharacterized protei 94.8 0.7 1.5E-05 40.2 11.5 56 104-166 41-99 (286)
498 TIGR02906 spore_CotS spore coa 94.4 0.087 1.9E-06 48.5 6.0 29 202-231 187-215 (313)
499 COG2334 Putative homoserine ki 94.0 0.13 2.9E-06 47.6 6.1 29 204-232 199-228 (331)
500 PTZ00296 choline kinase; Provi 93.9 1.1 2.4E-05 43.5 12.6 30 202-232 284-313 (442)
No 1
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=6.7e-54 Score=377.88 Aligned_cols=261 Identities=28% Similarity=0.416 Sum_probs=216.8
Q ss_pred cCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCC-CcccHHHHHHHHHHhhcCCCCccceeeeeeecCCccc
Q 035862 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNH-GLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERG 150 (393)
Q Consensus 72 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 150 (393)
++.+.++.||+|..|+||++.++.+ ++.+|+|++.-. .....+++.+|+++++.++|||||.+||.|..+..
T Consensus 79 ~dle~~~~lG~G~gG~V~kv~Hk~t-----~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~-- 151 (364)
T KOG0581|consen 79 SDLERLGVLGSGNGGTVYKVRHKPT-----GKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGE-- 151 (364)
T ss_pred HHhhhhhhcccCCCcEEEEEEEcCC-----CeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCc--
Confidence 3566778999999999999997644 457999999533 44567889999999999999999999999988874
Q ss_pred ceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCC
Q 035862 151 IQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLA 230 (393)
Q Consensus 151 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a 230 (393)
..+++||||++|+|++++.. .+.+++.....++.++++||.|||.. .+||||||||.||||+..|+|||||||.+
T Consensus 152 -~isI~mEYMDgGSLd~~~k~--~g~i~E~~L~~ia~~VL~GL~YLh~~--~~IIHRDIKPsNlLvNskGeVKicDFGVS 226 (364)
T KOG0581|consen 152 -EISICMEYMDGGSLDDILKR--VGRIPEPVLGKIARAVLRGLSYLHEE--RKIIHRDIKPSNLLVNSKGEVKICDFGVS 226 (364)
T ss_pred -eEEeehhhcCCCCHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHhhc--cCeeeccCCHHHeeeccCCCEEecccccc
Confidence 35999999999999999843 36799999999999999999999962 29999999999999999999999999999
Q ss_pred ccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCch---hhhHHHHHHhhcCcCC
Q 035862 231 REGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPT---MEQKLLEWVKQFPADG 307 (393)
Q Consensus 231 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~---~~~~~~~~~~~~~~~~ 307 (393)
..+... ...+.+||..|||||.+.+..|+.++||||||++++|+.+|+.||....+. .-..+.......
T Consensus 227 ~~lvnS----~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~p---- 298 (364)
T KOG0581|consen 227 GILVNS----IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVDEP---- 298 (364)
T ss_pred HHhhhh----hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhcCC----
Confidence 876544 567889999999999999999999999999999999999999999875221 111222211111
Q ss_pred cccccccCcccccccCH-HHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhhc
Q 035862 308 KKFSMMIDPRLRNQYSI-NAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQESE 363 (393)
Q Consensus 308 ~~~~~~~~~~~~~~~~~-~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~~~~~~ 363 (393)
....+. .+++++.+|+..||++||.+||+++++++|.|.......
T Consensus 299 -----------pP~lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~Hpfi~~~~~~ 344 (364)
T KOG0581|consen 299 -----------PPRLPEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQHPFIKKFEDP 344 (364)
T ss_pred -----------CCCCCcccCCHHHHHHHHHHhcCCcccCCCHHHHhcCHHHhhcccc
Confidence 111222 378999999999999999999999999999998765443
No 2
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4.2e-53 Score=375.73 Aligned_cols=259 Identities=24% Similarity=0.362 Sum_probs=209.2
Q ss_pred HHhcCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcc-------cHHHHHHHHHHhhcCCCCccceeee
Q 035862 69 EATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQ-------GHKQWLAEVQFLGVVSHPNLVKLLG 141 (393)
Q Consensus 69 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~-------~~~~~~~E~~~l~~l~h~niv~~~~ 141 (393)
...+.|.+.+.||+|+||.|-+|..+.+. +.||||++.+.... ......+|+++|+.++|||||++++
T Consensus 169 s~~d~yii~~~LGsGafg~Vkla~e~~tg-----k~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d 243 (475)
T KOG0615|consen 169 SFNDYYIISKTLGSGAFGLVKLAYEKKTG-----KQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKD 243 (475)
T ss_pred hhcceeEeeeeecCCceeEEEEEEEcccC-----cEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEee
Confidence 34577999999999999999999966554 45999999864222 2233568999999999999999999
Q ss_pred eeecCCcccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCC--
Q 035862 142 YCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGN-- 219 (393)
Q Consensus 142 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~-- 219 (393)
+|..++. .|+||||++||+|.+++ ..++.+.+.....+++|++.|+.|||++ ||+||||||+|||++.+
T Consensus 244 ~f~~~ds----~YmVlE~v~GGeLfd~v--v~nk~l~ed~~K~~f~Qll~avkYLH~~---GI~HRDiKPeNILl~~~~e 314 (475)
T KOG0615|consen 244 FFEVPDS----SYMVLEYVEGGELFDKV--VANKYLREDLGKLLFKQLLTAVKYLHSQ---GIIHRDIKPENILLSNDAE 314 (475)
T ss_pred eeecCCc----eEEEEEEecCccHHHHH--HhccccccchhHHHHHHHHHHHHHHHHc---CcccccCCcceEEeccCCc
Confidence 9999884 49999999999999999 4455678888899999999999999999 99999999999999776
Q ss_pred -CceEEeeccCCccCCCCCCccccccccccCCccCccccccCCC---CchhhHHHHHHHHHHHHhCCCccCCCCchh-hh
Q 035862 220 -FKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHL---KSQSDIWSFGVVLYEILTGRRVLERNRPTM-EQ 294 (393)
Q Consensus 220 -~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~---~~~~DiwslGvil~elltg~~pf~~~~~~~-~~ 294 (393)
..+||+|||+|+..... ..+.+.|||+.|.|||++.+..+ ..++||||+||+||-+|+|.+||....... ..
T Consensus 315 ~~llKItDFGlAK~~g~~---sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~ 391 (475)
T KOG0615|consen 315 DCLLKITDFGLAKVSGEG---SFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLK 391 (475)
T ss_pred ceEEEecccchhhccccc---eehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHH
Confidence 67999999999976533 34567899999999999976543 347899999999999999999998654432 11
Q ss_pred HHHHHHhhcCcCCcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q 035862 295 KLLEWVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLA 358 (393)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~ 358 (393)
..+... .+.+ ....-..++++..+||.+||..||++|||+.|+|+|.|.-
T Consensus 392 eQI~~G-~y~f-------------~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~hpW~~ 441 (475)
T KOG0615|consen 392 EQILKG-RYAF-------------GPLQWDRISEEALDLINWMLVVDPENRPSADEALNHPWFK 441 (475)
T ss_pred HHHhcC-cccc-------------cChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcChhhh
Confidence 111000 0100 1111225789999999999999999999999999999975
No 3
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=5.3e-52 Score=369.03 Aligned_cols=254 Identities=28% Similarity=0.443 Sum_probs=208.7
Q ss_pred hcCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCC--CcccHHHHHHHHHHhhcCCCCccceeeeeeecCCc
Q 035862 71 TNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNH--GLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDE 148 (393)
Q Consensus 71 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 148 (393)
.++|...+.||.|+||+||+|+++.+. ..||||.+... .....+.+..|+.+|+.++|||||.+++++..++
T Consensus 9 ~~~y~~~~~iG~GsfavVykg~h~~~~-----~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~- 82 (429)
T KOG0595|consen 9 VGDYELSREIGSGSFAVVYKGRHKKSG-----TEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDD- 82 (429)
T ss_pred cccceehhhccCcceEEEEEeEeccCC-----ceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCC-
Confidence 567999999999999999999987554 46999999876 3445566789999999999999999999999888
Q ss_pred ccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCC------Cce
Q 035862 149 RGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGN------FKP 222 (393)
Q Consensus 149 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~------~~~ 222 (393)
++|+|||||+||+|.+||.. .+.+++.+++.++.||+.||++||++ +||||||||.||||+.. -.+
T Consensus 83 ---~i~lVMEyC~gGDLs~yi~~--~~~l~e~t~r~Fm~QLA~alq~L~~~---~IiHRDLKPQNiLLs~~~~~~~~~~L 154 (429)
T KOG0595|consen 83 ---FIYLVMEYCNGGDLSDYIRR--RGRLPEATARHFMQQLASALQFLHEN---NIIHRDLKPQNILLSTTARNDTSPVL 154 (429)
T ss_pred ---eEEEEEEeCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCcceEEeccCCCCCCCceE
Confidence 67999999999999999954 45799999999999999999999999 99999999999999765 458
Q ss_pred EEeeccCCccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhh
Q 035862 223 KLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQ 302 (393)
Q Consensus 223 kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~ 302 (393)
||+|||+|+.+.... .....+|++.|||||++..++|+.|+|+||+|+|+|++++|++||.......-....+..
T Consensus 155 KIADFGfAR~L~~~~---~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~~~~k~-- 229 (429)
T KOG0595|consen 155 KIADFGFARFLQPGS---MAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETPKELLLYIKKG-- 229 (429)
T ss_pred EecccchhhhCCchh---HHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhcc--
Confidence 999999999876543 456789999999999999999999999999999999999999999866543322211111
Q ss_pred cCcCCcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 035862 303 FPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLK 356 (393)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~ 356 (393)
.......+...+..+.+++...|+.+|.+|-+..+...+..
T Consensus 230 -------------~~~~~~~~~~~s~~~~~Ll~~ll~~~~~~~~~~~~~~~~~~ 270 (429)
T KOG0595|consen 230 -------------NEIVPVLPAELSNPLRELLISLLQRNPKDRISFEDFFDHPF 270 (429)
T ss_pred -------------ccccCchhhhccCchhhhhhHHHhcCccccCchHHhhhhhh
Confidence 11122223334455667888888888888888777766644
No 4
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.4e-51 Score=378.08 Aligned_cols=291 Identities=52% Similarity=0.902 Sum_probs=245.6
Q ss_pred ccccccHHHHHHHhcCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcccHHHHHHHHHHhhcCCCCccc
Q 035862 58 HLRVFDMQELREATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLV 137 (393)
Q Consensus 58 ~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv 137 (393)
..+.|+..++..++++|.....||+|+||.||+|...+. ..||||.+.........+|.+|+.++.+++|||+|
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~------~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv 134 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDG------TVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLV 134 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCC------CEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcc
Confidence 567799999999999999999999999999999997543 46999988765433145599999999999999999
Q ss_pred eeeeeeecCCcccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeC
Q 035862 138 KLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLD 217 (393)
Q Consensus 138 ~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~ 217 (393)
+++|||.+.+. .++|||||+.+|+|.++|+......++|..+.+|+.++|.||+|||..+...|+||||||.|||+|
T Consensus 135 ~LlGyC~e~~~---~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD 211 (361)
T KOG1187|consen 135 KLLGYCLEGGE---HRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLD 211 (361)
T ss_pred cEEEEEecCCc---eEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeEC
Confidence 99999998874 359999999999999999765543789999999999999999999998766899999999999999
Q ss_pred CCCceEEeeccCCccCCCCCCccccccc-cccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHH
Q 035862 218 GNFKPKLSDFGLAREGPTGDHTHVSTAV-VGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKL 296 (393)
Q Consensus 218 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~-~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~ 296 (393)
+++++||+|||+|+..+.. .. ..... .||.+|+|||++..+..+.|+|||||||++.||+||+.+.+...+..+..+
T Consensus 212 ~~~~aKlsDFGLa~~~~~~-~~-~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l 289 (361)
T KOG1187|consen 212 EDFNAKLSDFGLAKLGPEG-DT-SVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSL 289 (361)
T ss_pred CCCCEEccCccCcccCCcc-cc-ceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccH
Confidence 9999999999999765431 11 11122 899999999999999999999999999999999999998887665555557
Q ss_pred HHHHhhcCcCCcccccccCcccc-cccCH-HHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHh
Q 035862 297 LEWVKQFPADGKKFSMMIDPRLR-NQYSI-NAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQ 360 (393)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~~~ 360 (393)
..|......++ .+.+++|+.+. ..+.. ..-..+..+...|++.+|.+||+|.++++.|..+..
T Consensus 290 ~~w~~~~~~~~-~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~~ 354 (361)
T KOG1187|consen 290 VEWAKPLLEEG-KLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGILS 354 (361)
T ss_pred HHHHHHHHHCc-chhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhcc
Confidence 77765554544 78888999876 66654 456678999999999999999999999998855543
No 5
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4.1e-51 Score=380.26 Aligned_cols=252 Identities=27% Similarity=0.431 Sum_probs=213.8
Q ss_pred cCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCC---CcccHHHHHHHHHHhhcCCCCccceeeeeeecCCc
Q 035862 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNH---GLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDE 148 (393)
Q Consensus 72 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 148 (393)
.+|...+.||+|||+.||.+++..+++ .||+|++.+. .......+.+|++|.++++|||||+++++|++.+
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge-----~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~- 91 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGE-----VVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSN- 91 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCc-----EEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCC-
Confidence 359999999999999999999765554 5999999874 2234567889999999999999999999999888
Q ss_pred ccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeecc
Q 035862 149 RGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFG 228 (393)
Q Consensus 149 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg 228 (393)
+.|+|.|+|..++|.+++. ..+.+++.+++.+++||+.||.|||++ +|+|||||.+|+|++++.+|||+|||
T Consensus 92 ---nVYivLELC~~~sL~el~K--rrk~ltEpEary~l~QIv~GlkYLH~~---~IiHRDLKLGNlfL~~~~~VKIgDFG 163 (592)
T KOG0575|consen 92 ---NVYIVLELCHRGSLMELLK--RRKPLTEPEARYFLRQIVEGLKYLHSL---GIIHRDLKLGNLFLNENMNVKIGDFG 163 (592)
T ss_pred ---ceEEEEEecCCccHHHHHH--hcCCCCcHHHHHHHHHHHHHHHHHHhc---CceecccchhheeecCcCcEEecccc
Confidence 5699999999999999985 456799999999999999999999999 99999999999999999999999999
Q ss_pred CCccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcCCc
Q 035862 229 LAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGK 308 (393)
Q Consensus 229 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 308 (393)
+|......+. ...+.||||.|.|||++....++..+||||+||+||-||.|++||+...-... ...+...
T Consensus 164 LAt~le~~~E--rk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vket------y~~Ik~~-- 233 (592)
T KOG0575|consen 164 LATQLEYDGE--RKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKET------YNKIKLN-- 233 (592)
T ss_pred eeeeecCccc--ccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHHH------HHHHHhc--
Confidence 9998765433 23568999999999999999999999999999999999999999985422111 1111110
Q ss_pred ccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 035862 309 KFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKL 357 (393)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~ 357 (393)
.-..|..++.++.+||.++|++||.+|||+++|+.|-+.
T Consensus 234 ----------~Y~~P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h~Ff 272 (592)
T KOG0575|consen 234 ----------EYSMPSHLSAEAKDLIRKLLRPNPSERPSLDEVLDHPFF 272 (592)
T ss_pred ----------CcccccccCHHHHHHHHHHhcCCcccCCCHHHHhcCHhh
Confidence 011233567899999999999999999999999999877
No 6
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4.2e-52 Score=352.32 Aligned_cols=261 Identities=26% Similarity=0.368 Sum_probs=208.5
Q ss_pred cCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCc--ccHHHHHHHHHHhhcCCCCccceeeeeeecCCcc
Q 035862 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL--QGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDER 149 (393)
Q Consensus 72 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 149 (393)
.+|+++++||.|.||+||++....++ ..+|.|.++.... ........|+.+|++++|||||+++++...++..
T Consensus 19 ~~y~Il~~IG~GsFg~vykv~~~~~g-----~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~e 93 (375)
T KOG0591|consen 19 ADYQILKKIGRGSFGEVYKVQCLLDG-----KLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNE 93 (375)
T ss_pred HHHHHHHHHcCCcchheEEeeeccCc-----chhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccch
Confidence 35888999999999999999876544 4699999985533 3345578999999999999999999954444332
Q ss_pred cceEEEEEeecCCCChHHHHh--hcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCC-CeEeccCCCCCeEeCCCCceEEee
Q 035862 150 GIQRLLVYEYMPNRSLEDRLF--SRAQPTLPWKTRLEIILGAAEGLAYLHEGLEI-QVIYRDFKTSNVLLDGNFKPKLSD 226 (393)
Q Consensus 150 ~~~~~lv~e~~~~~~L~~~l~--~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~-~ivH~Dikp~NIll~~~~~~kl~D 226 (393)
.+++|||+|.+|+|..++. ......+++..+|.++.|++.||..+|+..+. -|+||||||.||+++.+|.+||+|
T Consensus 94 --vlnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGD 171 (375)
T KOG0591|consen 94 --VLNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGD 171 (375)
T ss_pred --hhHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeecc
Confidence 3589999999999999884 34567899999999999999999999994221 399999999999999999999999
Q ss_pred ccCCccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcC
Q 035862 227 FGLAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPAD 306 (393)
Q Consensus 227 fg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~ 306 (393)
||+++.+... .....+.+|||.||+||.+.+..|+.++||||+||++|||+...+||.+..-..- .....+.
T Consensus 172 fGL~r~l~s~--~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L---~~KI~qg--- 243 (375)
T KOG0591|consen 172 FGLGRFLSSK--TTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDNLLSL---CKKIEQG--- 243 (375)
T ss_pred chhHhHhcch--hHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccccHHHH---HHHHHcC---
Confidence 9999986543 3345678999999999999999999999999999999999999999987632111 1111111
Q ss_pred CcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 035862 307 GKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKL 357 (393)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~ 357 (393)
.........++.++..+|..|+..||+.||+...++..+..
T Consensus 244 ----------d~~~~p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di~~ 284 (375)
T KOG0591|consen 244 ----------DYPPLPDEHYSTDLRELINMCIAVDPEQRPDTVPYVQDIQS 284 (375)
T ss_pred ----------CCCCCcHHHhhhHHHHHHHHHccCCcccCCCcchHHHHHHH
Confidence 11111124678999999999999999999996665555543
No 7
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=3e-51 Score=350.50 Aligned_cols=267 Identities=26% Similarity=0.378 Sum_probs=210.2
Q ss_pred cCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCc--ccHHHHHHHHHHhhcCCCCccceeeeeeecCCcc
Q 035862 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL--QGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDER 149 (393)
Q Consensus 72 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 149 (393)
+.|+.+.++|+|+||.||+++++. ++.+||||++..+.. ...+-.++|+++|++++|+|+|.++++|....
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~-----TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkr-- 74 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKD-----TGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKR-- 74 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCC-----cccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcc--
Confidence 468899999999999999999654 456899999876543 23355789999999999999999999998777
Q ss_pred cceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccC
Q 035862 150 GIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGL 229 (393)
Q Consensus 150 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~ 229 (393)
.+++|+|||+. ++.+-|... ..+++...+..+++|++.|+.|+|++ +++||||||+||||+.+|.+||||||+
T Consensus 75 --klhLVFE~~dh-TvL~eLe~~-p~G~~~~~vk~~l~Q~l~ai~~cHk~---n~IHRDIKPENILit~~gvvKLCDFGF 147 (396)
T KOG0593|consen 75 --KLHLVFEYCDH-TVLHELERY-PNGVPSELVKKYLYQLLKAIHFCHKN---NCIHRDIKPENILITQNGVVKLCDFGF 147 (396)
T ss_pred --eeEEEeeecch-HHHHHHHhc-cCCCCHHHHHHHHHHHHHHhhhhhhc---CeecccCChhheEEecCCcEEeccchh
Confidence 56999999977 444445433 34589999999999999999999999 999999999999999999999999999
Q ss_pred CccCCCCCCccccccccccCCccCcccccc-CCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHH-h------
Q 035862 230 AREGPTGDHTHVSTAVVGTYGYAAPEYIET-GHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWV-K------ 301 (393)
Q Consensus 230 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~-~------ 301 (393)
|+.+..... ..+.++.|.||+|||++.+ .+|...+||||+||++.||++|.+.|++.++-.+.-.+... .
T Consensus 148 AR~L~~pgd--~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prh 225 (396)
T KOG0593|consen 148 ARTLSAPGD--NYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRH 225 (396)
T ss_pred hHhhcCCcc--hhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHH
Confidence 998764222 3467899999999999987 68999999999999999999999999887665443222211 1
Q ss_pred ------hcCcCCcccccccCcc-cccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 035862 302 ------QFPADGKKFSMMIDPR-LRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESL 355 (393)
Q Consensus 302 ------~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l 355 (393)
...+.|-.+.+.-++. +...+ +..+.-+.+|+++||..||.+|++.++++.|.
T Consensus 226 q~iF~~N~~F~Gv~lP~~~~~epLe~k~-p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H~ 285 (396)
T KOG0593|consen 226 QSIFSSNPFFHGVRLPEPEHPEPLERKY-PKISNVLLDLLKKCLKMDPDDRLSCEQLLHHP 285 (396)
T ss_pred HHHhccCCceeeeecCCCCCccchhhhc-ccchHHHHHHHHHHhcCCccccccHHHHhcCh
Confidence 1111112222211111 11112 24566789999999999999999999999985
No 8
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-49 Score=366.79 Aligned_cols=262 Identities=34% Similarity=0.566 Sum_probs=215.4
Q ss_pred CcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCccc--HHHHHHHHHHhhcCCCCccceeeeeeecCCcccc
Q 035862 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQG--HKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGI 151 (393)
Q Consensus 74 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 151 (393)
......||.|+||+||+|.++... .||+|.+....... ...+.+|+.+|+.++|||||+++|++.....
T Consensus 43 l~~~~~iG~G~~g~V~~~~~~g~~------~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~--- 113 (362)
T KOG0192|consen 43 LPIEEVLGSGSFGTVYKGKWRGTD------VVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPG--- 113 (362)
T ss_pred hhhhhhcccCCceeEEEEEeCCce------eEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC---
Confidence 344455999999999999987544 39999998653222 4589999999999999999999999988763
Q ss_pred eEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCC-eEeccCCCCCeEeCCCC-ceEEeeccC
Q 035862 152 QRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQ-VIYRDFKTSNVLLDGNF-KPKLSDFGL 229 (393)
Q Consensus 152 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~-ivH~Dikp~NIll~~~~-~~kl~Dfg~ 229 (393)
.+++||||+.+|+|.+++.......+++..++.++.||+.||.|||++ + ||||||||+|||++.++ ++||+|||+
T Consensus 114 ~~~iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~---~~iIHrDLK~~NiLv~~~~~~~KI~DFGl 190 (362)
T KOG0192|consen 114 SLCIVTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSE---GPIIHRDLKSDNILVDLKGKTLKIADFGL 190 (362)
T ss_pred ceEEEEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcC---CCeeecccChhhEEEcCCCCEEEECCCcc
Confidence 358999999999999999765567899999999999999999999998 8 99999999999999998 999999999
Q ss_pred CccCCCCCCccccccccccCCccCccccc--cCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcCC
Q 035862 230 AREGPTGDHTHVSTAVVGTYGYAAPEYIE--TGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADG 307 (393)
Q Consensus 230 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 307 (393)
++...... ...+...||+.|||||++. ...|+.|+||||||+++|||+||+.||....+ .+ ......
T Consensus 191 sr~~~~~~--~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~-~~-~~~~v~------- 259 (362)
T KOG0192|consen 191 SREKVISK--TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAP-VQ-VASAVV------- 259 (362)
T ss_pred ceeecccc--ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCH-HH-HHHHHH-------
Confidence 98754332 2234478999999999999 56999999999999999999999999987655 11 111111
Q ss_pred cccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhhcCC
Q 035862 308 KKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQESEQG 365 (393)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~~~~~~~~ 365 (393)
....+...+..++..+..++..||..||..||++.+++..|..+.......
T Consensus 260 -------~~~~Rp~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~~~~~~ 310 (362)
T KOG0192|consen 260 -------VGGLRPPIPKECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIMSHISSA 310 (362)
T ss_pred -------hcCCCCCCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHHhhccc
Confidence 112233333446788999999999999999999999999999887755443
No 9
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=5e-50 Score=353.29 Aligned_cols=251 Identities=27% Similarity=0.388 Sum_probs=209.6
Q ss_pred cCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcc---cHHHHHHHHHHhhcCCCCccceeeeeeecCCc
Q 035862 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQ---GHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDE 148 (393)
Q Consensus 72 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 148 (393)
++|+++++||+|+||+||.++.+ +.++.+|+|++++.... ..+....|..+|..++||.||+++-.|.+.+
T Consensus 25 ~dF~~lkviGkG~fGkV~~Vrk~-----dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~- 98 (357)
T KOG0598|consen 25 DDFEILKVIGKGSFGKVFQVRKK-----DTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEE- 98 (357)
T ss_pred hheeeeeeeeccCCceEEEEEEc-----ccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCC-
Confidence 56999999999999999999865 45568999999876433 3456788999999999999999999888877
Q ss_pred ccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeecc
Q 035862 149 RGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFG 228 (393)
Q Consensus 149 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg 228 (393)
.+|+|+||+.||.|...| ..++.+++..++-++..|+.||.|||+. |||||||||+|||++.+|+++|+|||
T Consensus 99 ---kLylVld~~~GGeLf~hL--~~eg~F~E~~arfYlaEi~lAL~~LH~~---gIiyRDlKPENILLd~~GHi~LtDFg 170 (357)
T KOG0598|consen 99 ---KLYLVLDYLNGGELFYHL--QREGRFSEDRARFYLAEIVLALGYLHSK---GIIYRDLKPENILLDEQGHIKLTDFG 170 (357)
T ss_pred ---eEEEEEeccCCccHHHHH--HhcCCcchhHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHeeecCCCcEEEeccc
Confidence 679999999999999988 5567799999999999999999999999 99999999999999999999999999
Q ss_pred CCccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcCCc
Q 035862 229 LAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGK 308 (393)
Q Consensus 229 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 308 (393)
+++.....+. ...+.+||+.|||||++.+..|+..+|.||||+++|||++|.+||...+.....+.+...+
T Consensus 171 L~k~~~~~~~--~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I~~~k------- 241 (357)
T KOG0598|consen 171 LCKEDLKDGD--ATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKILKGK------- 241 (357)
T ss_pred cchhcccCCC--ccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHHHhcCc-------
Confidence 9986443322 3456899999999999999999999999999999999999999998765432221111000
Q ss_pred ccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCC----CHHHHHHHH
Q 035862 309 KFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERP----TMNQVVESL 355 (393)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rp----s~~~~l~~l 355 (393)
....+...+.++.+++.++|..||++|. .+.++-+|.
T Consensus 242 ----------~~~~p~~ls~~ardll~~LL~rdp~~RLg~~~d~~~ik~Hp 282 (357)
T KOG0598|consen 242 ----------LPLPPGYLSEEARDLLKKLLKRDPRQRLGGPGDAEEIKRHP 282 (357)
T ss_pred ----------CCCCCccCCHHHHHHHHHHhccCHHHhcCCCCChHHhhcCc
Confidence 1112223568899999999999999995 577777774
No 10
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.5e-50 Score=362.95 Aligned_cols=274 Identities=27% Similarity=0.382 Sum_probs=219.6
Q ss_pred HhcCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcccHH-HHHHHHHHhhcCC-CCccceeeeeeecCC
Q 035862 70 ATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHK-QWLAEVQFLGVVS-HPNLVKLLGYCSTED 147 (393)
Q Consensus 70 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~-~~~~E~~~l~~l~-h~niv~~~~~~~~~~ 147 (393)
..++|.++++||.|+||.||+|+...+. ..||||.+++......+ .-++|++.|++++ ||||+++.+++.+.+
T Consensus 8 ~m~RY~~i~klGDGTfGsV~la~~~~~~-----~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~ 82 (538)
T KOG0661|consen 8 FMDRYTVIRKLGDGTFGSVYLAKSKETG-----ELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDND 82 (538)
T ss_pred HHHHHHHHHHhcCCcceeEEEeeecCCC-----ceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccC
Confidence 3567999999999999999999965443 35999999876433222 2368999999999 999999999998877
Q ss_pred cccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeec
Q 035862 148 ERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDF 227 (393)
Q Consensus 148 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Df 227 (393)
. .+++|||||+ .+|.+++..+ ...+++..++.|+.||+.||+|+|.+ |++|||+||+|||+..+..+||+||
T Consensus 83 ~---~L~fVfE~Md-~NLYqLmK~R-~r~fse~~irnim~QilqGL~hiHk~---GfFHRDlKPENiLi~~~~~iKiaDF 154 (538)
T KOG0661|consen 83 R---ILYFVFEFMD-CNLYQLMKDR-NRLFSESDIRNIMYQILQGLAHIHKH---GFFHRDLKPENILISGNDVIKIADF 154 (538)
T ss_pred c---eEeeeHHhhh-hhHHHHHhhc-CCcCCHHHHHHHHHHHHHHHHHHHhc---CcccccCChhheEecccceeEeccc
Confidence 5 6799999994 5999999877 78899999999999999999999999 9999999999999999999999999
Q ss_pred cCCccCCCCCCccccccccccCCccCcccc-ccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcC
Q 035862 228 GLAREGPTGDHTHVSTAVVGTYGYAAPEYI-ETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPAD 306 (393)
Q Consensus 228 g~a~~~~~~~~~~~~~~~~gt~~y~aPE~~-~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~ 306 (393)
|+|+...... ..+.++.|.||+|||++ ....|+.+.|||++|||++|+.+-++.|++.++..+...+..+..-|..
T Consensus 155 GLARev~Skp---PYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~ 231 (538)
T KOG0661|consen 155 GLAREVRSKP---PYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDK 231 (538)
T ss_pred ccccccccCC---CcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCcc
Confidence 9999765443 45788999999999977 5678999999999999999999999999988766554332222222222
Q ss_pred Cccc-------------ccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHh
Q 035862 307 GKKF-------------SMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQ 360 (393)
Q Consensus 307 ~~~~-------------~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~~~ 360 (393)
.... .....-.+..-.+ .++.++.++|.+|+.+||.+|||++++++|......
T Consensus 232 ~~~~eg~~La~~mnf~~P~~~~~~l~~L~p-~~s~~~~~li~~ll~WDP~kRpTA~~al~~pffq~~ 297 (538)
T KOG0661|consen 232 DSWPEGYNLASAMNFRFPQVKPSPLKDLLP-NASSEAASLIERLLAWDPDKRPTASQALQHPFFQVG 297 (538)
T ss_pred ccchhHHHHHHHhccCCCcCCCCChHHhCc-ccCHHHHHHHHHHhcCCCccCccHHHHhcCcccccc
Confidence 1110 0111111111122 378899999999999999999999999999876554
No 11
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4.4e-49 Score=362.86 Aligned_cols=256 Identities=32% Similarity=0.499 Sum_probs=218.1
Q ss_pred CcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcccHHHHHHHHHHhhcCCCCccceeeeeeecCCcccceE
Q 035862 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQR 153 (393)
Q Consensus 74 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 153 (393)
+..++.||+|.||.||.|.+....+ ||+|.+.... .....|.+|+++|+.++|+|||+++++|..++. +
T Consensus 208 l~l~~~LG~G~FG~V~~g~~~~~~~------vavk~ik~~~-m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~p----i 276 (468)
T KOG0197|consen 208 LKLIRELGSGQFGEVWLGKWNGSTK------VAVKTIKEGS-MSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEP----I 276 (468)
T ss_pred HHHHHHhcCCccceEEEEEEcCCCc------ccceEEeccc-cChhHHHHHHHHHHhCcccCeEEEEEEEecCCc----e
Confidence 4567789999999999999986643 8999987753 345678899999999999999999999998773 4
Q ss_pred EEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCCccC
Q 035862 154 LLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREG 233 (393)
Q Consensus 154 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~ 233 (393)
+|||||+..|+|.++|.......+...+.+.++.|||+||+||+++ ++|||||.+.||||++++.+||+|||+|+..
T Consensus 277 yIVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~---~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~ 353 (468)
T KOG0197|consen 277 YIVTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESK---NYIHRDLAARNILVDEDLVVKISDFGLARLI 353 (468)
T ss_pred EEEEEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhC---CccchhhhhhheeeccCceEEEccccccccc
Confidence 9999999999999999876778899999999999999999999999 9999999999999999999999999999943
Q ss_pred CCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHh-CCCccCCCCchhhhHHHHHHhhcCcCCccccc
Q 035862 234 PTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILT-GRRVLERNRPTMEQKLLEWVKQFPADGKKFSM 312 (393)
Q Consensus 234 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (393)
. .+.........-+..|.|||.+....++.|||||||||+||||+| |+.||....... .-.
T Consensus 354 ~-d~~Y~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~e-----------------v~~ 415 (468)
T KOG0197|consen 354 G-DDEYTASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEE-----------------VLE 415 (468)
T ss_pred C-CCceeecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHH-----------------HHH
Confidence 3 333333344455668999999999999999999999999999999 777776543211 122
Q ss_pred ccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhh
Q 035862 313 MIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQE 361 (393)
Q Consensus 313 ~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~~~~ 361 (393)
.++++.+.+.|..||+++.+++..||..+|++|||++.+...+..+...
T Consensus 416 ~le~GyRlp~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~~~ 464 (468)
T KOG0197|consen 416 LLERGYRLPRPEGCPDEVYELMKSCWHEDPEDRPTFETLREVLEDFFTS 464 (468)
T ss_pred HHhccCcCCCCCCCCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhhhc
Confidence 3456677778888999999999999999999999999999999887653
No 12
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=1.6e-48 Score=328.14 Aligned_cols=271 Identities=25% Similarity=0.346 Sum_probs=214.4
Q ss_pred cCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCC--cccHHHHHHHHHHhhcCCCCccceeeeeeecCCcc
Q 035862 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG--LQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDER 149 (393)
Q Consensus 72 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 149 (393)
++|...++||+|+||.||+|++..++ +.||||++.... ........+|++.|+.++|+||+.++++|...+
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~-----~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~-- 74 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETG-----KRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKS-- 74 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCC-----cEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCC--
Confidence 46888899999999999999976544 459999987542 223456789999999999999999999998877
Q ss_pred cceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccC
Q 035862 150 GIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGL 229 (393)
Q Consensus 150 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~ 229 (393)
.+.+|+||++. +|+..+++.. ..++...+..++.++++|++|||++ .|+||||||+|+|++++|.+||+|||+
T Consensus 75 --~l~lVfEfm~t-dLe~vIkd~~-i~l~pa~iK~y~~m~LkGl~y~H~~---~IlHRDlKPnNLLis~~g~lKiADFGL 147 (318)
T KOG0659|consen 75 --NLSLVFEFMPT-DLEVVIKDKN-IILSPADIKSYMLMTLKGLAYCHSK---WILHRDLKPNNLLISSDGQLKIADFGL 147 (318)
T ss_pred --ceEEEEEeccc-cHHHHhcccc-cccCHHHHHHHHHHHHHHHHHHHhh---hhhcccCCccceEEcCCCcEEeecccc
Confidence 45899999965 9999886544 4588899999999999999999999 999999999999999999999999999
Q ss_pred CccCCCCCCccccccccccCCccCcccccc-CCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcCC-
Q 035862 230 AREGPTGDHTHVSTAVVGTYGYAAPEYIET-GHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADG- 307 (393)
Q Consensus 230 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~- 307 (393)
|+........ ....+-|.+|+|||++.| ..|+..+||||.|||+.||+.|.+.|.+.++-.+-..+-.....|...
T Consensus 148 Ar~f~~p~~~--~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~ 225 (318)
T KOG0659|consen 148 ARFFGSPNRI--QTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQ 225 (318)
T ss_pred hhccCCCCcc--cccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCccc
Confidence 9987665443 334488999999998866 689999999999999999999999998776654443333332222221
Q ss_pred -ccccccc--------CcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q 035862 308 -KKFSMMI--------DPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLA 358 (393)
Q Consensus 308 -~~~~~~~--------~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~ 358 (393)
.....+- ........-..++.++.+|+.+||.+||.+|+++.|+++|-+.-
T Consensus 226 WP~~~~lpdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~yf~ 285 (318)
T KOG0659|consen 226 WPEMTSLPDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKHPYFK 285 (318)
T ss_pred CccccccccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcchhhh
Confidence 1111111 11111112224567789999999999999999999999998765
No 13
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.7e-48 Score=354.52 Aligned_cols=273 Identities=27% Similarity=0.382 Sum_probs=218.2
Q ss_pred hcCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCC--cccHHHHHHHHHHhhcCCCCccceeeeeeecCCc
Q 035862 71 TNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG--LQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDE 148 (393)
Q Consensus 71 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 148 (393)
.+.|+.+.+||+|+||.||+|++..+ +.+||+|++.... ........+|+.||++++||||+++.+.......
T Consensus 116 ~~~feki~kIGeGTyg~VYkAr~~~t-----gkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~ 190 (560)
T KOG0600|consen 116 ADSFEKIEKIGEGTYGQVYKARDLET-----GKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLS 190 (560)
T ss_pred hHHHHHHHHhcCcchhheeEeeeccc-----CcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCC
Confidence 45688999999999999999996544 4579999997654 4455667899999999999999999999988744
Q ss_pred ccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeecc
Q 035862 149 RGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFG 228 (393)
Q Consensus 149 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg 228 (393)
. .+|||+|||+. +|..++.. ..-.+++.++..++.||+.||+|||.+ ||+|||||..|||||.+|.+||+|||
T Consensus 191 ~--siYlVFeYMdh-DL~GLl~~-p~vkft~~qIKc~mkQLl~Gl~~cH~~---gvlHRDIK~SNiLidn~G~LKiaDFG 263 (560)
T KOG0600|consen 191 G--SIYLVFEYMDH-DLSGLLSS-PGVKFTEPQIKCYMKQLLEGLEYCHSR---GVLHRDIKGSNILIDNNGVLKIADFG 263 (560)
T ss_pred c--eEEEEEecccc-hhhhhhcC-CCcccChHHHHHHHHHHHHHHHHHhhc---CeeeccccccceEEcCCCCEEecccc
Confidence 4 56999999977 88887743 344689999999999999999999999 99999999999999999999999999
Q ss_pred CCccCCCCCCccccccccccCCccCccccccC-CCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcCC
Q 035862 229 LAREGPTGDHTHVSTAVVGTYGYAAPEYIETG-HLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADG 307 (393)
Q Consensus 229 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 307 (393)
+|++....... ..+..+-|.||+|||++.|. .|+.++|+||.||||.||++|+++|.+..+..+...+..+-..|.+.
T Consensus 264 LAr~y~~~~~~-~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~ 342 (560)
T KOG0600|consen 264 LARFYTPSGSA-PYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTED 342 (560)
T ss_pred ceeeccCCCCc-ccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChh
Confidence 99976544433 35678899999999999874 79999999999999999999999999887766555444333333222
Q ss_pred c-c---cc--cccCc------ccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 035862 308 K-K---FS--MMIDP------RLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKL 357 (393)
Q Consensus 308 ~-~---~~--~~~~~------~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~ 357 (393)
. . +. ..+.+ .+++ .-...+....+|+..||..||.+|.|+.+++++-+.
T Consensus 343 ~W~~~kLP~~~~~kp~~~y~r~l~E-~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~seyF 403 (560)
T KOG0600|consen 343 YWPVSKLPHATIFKPQQPYKRRLRE-TFKDFPASALDLLEKLLSLDPDKRGTASSALQSEYF 403 (560)
T ss_pred ccccccCCcccccCCCCcccchHHH-HhccCCHHHHHHHHHHhccCccccccHHHHhcCccc
Confidence 1 1 00 00100 0111 112456788999999999999999999999998665
No 14
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3e-48 Score=347.68 Aligned_cols=264 Identities=30% Similarity=0.441 Sum_probs=210.3
Q ss_pred CCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcccHHHHHHHHHHhhcCCCCccceeeeeeecCCcccce
Q 035862 73 GFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQ 152 (393)
Q Consensus 73 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 152 (393)
++...+.||+|+||+||++.+..+ +...|+|.+........+.+.+|+.+|++++|||||+++|....... ..
T Consensus 18 ~~~~~~~lG~Gs~G~V~l~~~~~~-----g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~--~~ 90 (313)
T KOG0198|consen 18 NWSKGKLLGRGSFGSVYLATNKKT-----GELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSREN--DE 90 (313)
T ss_pred hhhhhccccCccceEEEEEEecCC-----CcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccC--ee
Confidence 477788999999999999997643 34599999876533335668899999999999999999997544443 35
Q ss_pred EEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCC-CCceEEeeccCCc
Q 035862 153 RLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDG-NFKPKLSDFGLAR 231 (393)
Q Consensus 153 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~-~~~~kl~Dfg~a~ 231 (393)
++++|||+.+|+|.+++..... .+++..++.+.+|+++||.|||++ |+||+||||+|||++. ++.+||+|||++.
T Consensus 91 ~~i~mEy~~~GsL~~~~~~~g~-~l~E~~v~~ytr~iL~GL~ylHs~---g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~ 166 (313)
T KOG0198|consen 91 YNIFMEYAPGGSLSDLIKRYGG-KLPEPLVRRYTRQILEGLAYLHSK---GIVHCDIKPANILLDPSNGDVKLADFGLAK 166 (313)
T ss_pred eEeeeeccCCCcHHHHHHHcCC-CCCHHHHHHHHHHHHHHHHHHHhC---CEeccCcccceEEEeCCCCeEEeccCcccc
Confidence 6899999999999999976555 799999999999999999999999 9999999999999999 7999999999998
Q ss_pred cCCC-CCCccccccccccCCccCccccccC-CCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcCCcc
Q 035862 232 EGPT-GDHTHVSTAVVGTYGYAAPEYIETG-HLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKK 309 (393)
Q Consensus 232 ~~~~-~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 309 (393)
.... ...........||+.|||||++..+ ....++|||||||++.||+||++||.......+..+ ....
T Consensus 167 ~~~~~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~~~~-~ig~-------- 237 (313)
T KOG0198|consen 167 KLESKGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEEAEALL-LIGR-------- 237 (313)
T ss_pred ccccccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcchHHHHH-HHhc--------
Confidence 6553 1111223457899999999999853 334599999999999999999999986411111111 1110
Q ss_pred cccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhh
Q 035862 310 FSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQES 362 (393)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~~~~~ 362 (393)
....+..+..++.++.+|+.+|+..||++|||+.++++|++......
T Consensus 238 ------~~~~P~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~~~~~ 284 (313)
T KOG0198|consen 238 ------EDSLPEIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFLKQNSI 284 (313)
T ss_pred ------cCCCCCCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhChhhhcccc
Confidence 01112445567899999999999999999999999999998876544
No 15
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=3.3e-48 Score=356.18 Aligned_cols=249 Identities=32% Similarity=0.469 Sum_probs=213.0
Q ss_pred cCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCc--ccHHHHHHHHHHhhcCCCCccceeeeeeecCCcc
Q 035862 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL--QGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDER 149 (393)
Q Consensus 72 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 149 (393)
++|.+.+.||+|+||.||+|+ .+++..+||+|.+.+... ...+.+.+|++|++.++||||+.++++|....
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgr-----rK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~-- 74 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGR-----RKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSA-- 74 (808)
T ss_pred cchhHHHHhcCCccceeeecc-----cccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccc--
Confidence 468888999999999999998 455667899999987643 34566889999999999999999999998887
Q ss_pred cceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccC
Q 035862 150 GIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGL 229 (393)
Q Consensus 150 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~ 229 (393)
++++|.||+.| +|..+| ...+.++++.+..++.+++.||.|||++ +|.|||+||.|||++.+|.+|+||||+
T Consensus 75 --~~~vVte~a~g-~L~~il--~~d~~lpEe~v~~~a~~LVsaL~yLhs~---rilhrd~kPqniLl~~~~~~KlcdFg~ 146 (808)
T KOG0597|consen 75 --HLWVVTEYAVG-DLFTIL--EQDGKLPEEQVRAIAYDLVSALYYLHSN---RILHRDMKPQNILLEKGGTLKLCDFGL 146 (808)
T ss_pred --eEEEEehhhhh-hHHHHH--HhccCCCHHHHHHHHHHHHHHHHHHHhc---CcccccCCcceeeecCCCceeechhhh
Confidence 66999999977 999999 5566799999999999999999999999 999999999999999999999999999
Q ss_pred CccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcCCcc
Q 035862 230 AREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKK 309 (393)
Q Consensus 230 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 309 (393)
|+.... .....+...|||.|||||++.++.|+..+|+||||||+||+++|++||...+ +.+..+.+..+.
T Consensus 147 Ar~m~~--~t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~s------i~~Lv~~I~~d~-- 216 (808)
T KOG0597|consen 147 ARAMST--NTSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARS------ITQLVKSILKDP-- 216 (808)
T ss_pred hhhccc--CceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHH------HHHHHHHHhcCC--
Confidence 997543 3445677899999999999999999999999999999999999999997432 222222221111
Q ss_pred cccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 035862 310 FSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESL 355 (393)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l 355 (393)
..++..++..+.+|++.+|.+||.+|.++.+++.|.
T Consensus 217 ----------v~~p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~Hp 252 (808)
T KOG0597|consen 217 ----------VKPPSTASSSFVNFLQGLLIKDPAQRLTWTDLLGHP 252 (808)
T ss_pred ----------CCCcccccHHHHHHHHHHhhcChhhcccHHHHhcCh
Confidence 112346789999999999999999999999999996
No 16
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.5e-47 Score=354.18 Aligned_cols=256 Identities=25% Similarity=0.389 Sum_probs=212.3
Q ss_pred HhcCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCC----Cc-ccHHHHHHHHHHhhcCC-CCccceeeeee
Q 035862 70 ATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNH----GL-QGHKQWLAEVQFLGVVS-HPNLVKLLGYC 143 (393)
Q Consensus 70 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~----~~-~~~~~~~~E~~~l~~l~-h~niv~~~~~~ 143 (393)
..++|.+.+.||+|+||+|+.|.+..++ ..||+|++.+. .. .....+.+|+.+++.+. ||||+++++++
T Consensus 15 ~~g~y~~~~~lG~GsfgkV~~a~~~~t~-----~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~ 89 (370)
T KOG0583|consen 15 SIGKYELGRTLGSGSFGKVKLAKHRLTG-----EKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVF 89 (370)
T ss_pred ccCceeeeeeecCCCCeeEEEeeeccCC-----CeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEE
Confidence 3568999999999999999999976555 45999987664 11 23445668999999999 99999999999
Q ss_pred ecCCcccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCC-Cce
Q 035862 144 STEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGN-FKP 222 (393)
Q Consensus 144 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~-~~~ 222 (393)
.... ..++||||+.||+|.+++.+ .+.+.+..+..+++||+.|++|||+. ||+||||||+|||++.+ +++
T Consensus 90 ~t~~----~~~ivmEy~~gGdL~~~i~~--~g~l~E~~ar~~F~Qlisav~y~H~~---gi~HRDLK~ENilld~~~~~~ 160 (370)
T KOG0583|consen 90 ATPT----KIYIVMEYCSGGDLFDYIVN--KGRLKEDEARKYFRQLISAVAYCHSR---GIVHRDLKPENILLDGNEGNL 160 (370)
T ss_pred ecCC----eEEEEEEecCCccHHHHHHH--cCCCChHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEecCCCCCE
Confidence 9888 45999999999999999965 56789999999999999999999999 99999999999999999 999
Q ss_pred EEeeccCCccCCCCCCccccccccccCCccCccccccCC-CC-chhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHH
Q 035862 223 KLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIETGH-LK-SQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWV 300 (393)
Q Consensus 223 kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~-~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~ 300 (393)
||+|||++.... .........+||+.|+|||++.+.. |+ .++||||+||+||.|++|+.||.+......... .
T Consensus 161 Kl~DFG~s~~~~--~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~k---i 235 (370)
T KOG0583|consen 161 KLSDFGLSAISP--GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRK---I 235 (370)
T ss_pred EEeccccccccC--CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHH---H
Confidence 999999998763 1222456789999999999999877 86 689999999999999999999987432211111 1
Q ss_pred hhcCcCCcccccccCcccccccCHHH-HHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHH
Q 035862 301 KQFPADGKKFSMMIDPRLRNQYSINA-ARRVAKLADNCLKKNPEERPTMNQVVESLKLAV 359 (393)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~~ 359 (393)
. .. .-.++..+ +.++..|+.+||..||.+|+++.+++.|.|...
T Consensus 236 ~---~~------------~~~~p~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~~h~w~~~ 280 (370)
T KOG0583|consen 236 R---KG------------EFKIPSYLLSPEARSLIEKMLVPDPSTRITLLEILEHPWFQK 280 (370)
T ss_pred h---cC------------CccCCCCcCCHHHHHHHHHHcCCCcccCCCHHHHhhChhhcc
Confidence 0 00 01122233 788999999999999999999999999999886
No 17
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=1e-47 Score=352.32 Aligned_cols=258 Identities=25% Similarity=0.371 Sum_probs=215.0
Q ss_pred HhcCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCccc---HHHHHHHHHHhhcCCCCccceeeeeeecC
Q 035862 70 ATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQG---HKQWLAEVQFLGVVSHPNLVKLLGYCSTE 146 (393)
Q Consensus 70 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 146 (393)
..++|+.+..||+|+||.||+|+-+. ++.++|+|++++..... ...++.|-.+|....+|+||+++..|.+.
T Consensus 139 ~~~DFe~Lk~IgkGAfGeVrLarKk~-----Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~ 213 (550)
T KOG0605|consen 139 SLDDFELLKVIGKGAFGEVRLARKKD-----TGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDK 213 (550)
T ss_pred CcccchhheeeccccceeEEEEEEcc-----CCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCC
Confidence 35789999999999999999999554 45579999999875443 34567899999999999999999999888
Q ss_pred CcccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEee
Q 035862 147 DERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSD 226 (393)
Q Consensus 147 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~D 226 (393)
+ ++||||||++||++..+| .....+++..++.++.+++.|++.||+. |+|||||||+|+|||..|++||+|
T Consensus 214 ~----~LYLiMEylPGGD~mTLL--~~~~~L~e~~arfYiaE~vlAI~~iH~~---gyIHRDIKPdNlLiD~~GHiKLSD 284 (550)
T KOG0605|consen 214 E----YLYLIMEYLPGGDMMTLL--MRKDTLTEDWARFYIAETVLAIESIHQL---GYIHRDIKPDNLLIDAKGHIKLSD 284 (550)
T ss_pred C----eeEEEEEecCCccHHHHH--HhcCcCchHHHHHHHHHHHHHHHHHHHc---CcccccCChhheeecCCCCEeecc
Confidence 7 779999999999999999 5567899999999999999999999999 999999999999999999999999
Q ss_pred ccCCccCCC----------------------CCCc-----------------------cccccccccCCccCccccccCC
Q 035862 227 FGLAREGPT----------------------GDHT-----------------------HVSTAVVGTYGYAAPEYIETGH 261 (393)
Q Consensus 227 fg~a~~~~~----------------------~~~~-----------------------~~~~~~~gt~~y~aPE~~~~~~ 261 (393)
||++..... .+.. ....+.+|||.|+|||++.+..
T Consensus 285 FGLs~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kg 364 (550)
T KOG0605|consen 285 FGLSTGLDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKG 364 (550)
T ss_pred ccccchhhhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCC
Confidence 999853211 0000 0112569999999999999999
Q ss_pred CCchhhHHHHHHHHHHHHhCCCccCCCCchhh-hHHHHHHhhcCcCCcccccccCcccccccCHHHHHHHHHHHHHhccc
Q 035862 262 LKSQSDIWSFGVVLYEILTGRRVLERNRPTME-QKLLEWVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKK 340 (393)
Q Consensus 262 ~~~~~DiwslGvil~elltg~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~ 340 (393)
|+..+|+||||||+||||.|.+||....+... ..+..|...+.+... ..++.++.+||.+||+
T Consensus 365 Y~~~cDwWSLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~fP~~---------------~~~s~eA~DLI~rll~- 428 (550)
T KOG0605|consen 365 YGKECDWWSLGCIMYEMLVGYPPFCSETPQETYRKIVNWRETLKFPEE---------------VDLSDEAKDLITRLLC- 428 (550)
T ss_pred CCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhccCCCc---------------CcccHHHHHHHHHHhc-
Confidence 99999999999999999999999988776543 455566544433221 1245889999999999
Q ss_pred CCCCCC---CHHHHHHHHHH
Q 035862 341 NPEERP---TMNQVVESLKL 357 (393)
Q Consensus 341 dp~~Rp---s~~~~l~~l~~ 357 (393)
||++|. +++||-+|++.
T Consensus 429 d~~~RLG~~G~~EIK~HPfF 448 (550)
T KOG0605|consen 429 DPENRLGSKGAEEIKKHPFF 448 (550)
T ss_pred CHHHhcCcccHHHHhcCCcc
Confidence 999997 48999998764
No 18
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.3e-48 Score=355.39 Aligned_cols=258 Identities=25% Similarity=0.398 Sum_probs=218.8
Q ss_pred hcCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcccHHHHHHHHHHhhcCCCCccceeeeeeecCCccc
Q 035862 71 TNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERG 150 (393)
Q Consensus 71 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 150 (393)
...|....+||+|+.|.||.|....+. ..||+|.+........+-+++|+.+|+..+|+|||.+++.|...+
T Consensus 272 ~~~y~~~~kigqgaSG~vy~A~~~~~~-----~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~d--- 343 (550)
T KOG0578|consen 272 RSKYTDFKKIGQGATGGVYVARKISTK-----QEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGD--- 343 (550)
T ss_pred hhhhcchhhhccccccceeeeeeccCC-----ceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccc---
Confidence 457888899999999999999865444 459999998877666777899999999999999999999988876
Q ss_pred ceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCC
Q 035862 151 IQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLA 230 (393)
Q Consensus 151 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a 230 (393)
.++.||||++||+|.+.+. ...+++.++..+++.++.||+|||.+ ||+|||||.+|||++.+|.+||+|||++
T Consensus 344 -eLWVVMEym~ggsLTDvVt---~~~~~E~qIA~Icre~l~aL~fLH~~---gIiHrDIKSDnILL~~~g~vKltDFGFc 416 (550)
T KOG0578|consen 344 -ELWVVMEYMEGGSLTDVVT---KTRMTEGQIAAICREILQGLKFLHAR---GIIHRDIKSDNILLTMDGSVKLTDFGFC 416 (550)
T ss_pred -eeEEEEeecCCCchhhhhh---cccccHHHHHHHHHHHHHHHHHHHhc---ceeeeccccceeEeccCCcEEEeeeeee
Confidence 5699999999999999883 34489999999999999999999999 9999999999999999999999999999
Q ss_pred ccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcCCccc
Q 035862 231 REGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKF 310 (393)
Q Consensus 231 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (393)
........ .....+|||.|||||++....|+.++||||||++++||+-|.+||-...+.....++. .++
T Consensus 417 aqi~~~~~--KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLIa------~ng--- 485 (550)
T KOG0578|consen 417 AQISEEQS--KRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIA------TNG--- 485 (550)
T ss_pred eccccccC--ccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHHHHHHHh------hcC---
Confidence 87655433 4567899999999999999999999999999999999999999998655433222221 111
Q ss_pred ccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHh
Q 035862 311 SMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQ 360 (393)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~~~ 360 (393)
......+..++..+.+|+.+||+.|+++|+++.++|+|.....+
T Consensus 486 ------~P~lk~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~HpFl~~a 529 (550)
T KOG0578|consen 486 ------TPKLKNPEKLSPELKDFLDRCLVVDVEQRASAKELLEHPFLKMA 529 (550)
T ss_pred ------CCCcCCccccCHHHHHHHHHHhhcchhcCCCHHHHhcChhhhhc
Confidence 11223344678999999999999999999999999999877443
No 19
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=9.2e-48 Score=352.47 Aligned_cols=255 Identities=24% Similarity=0.362 Sum_probs=211.6
Q ss_pred HhcCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcc---cHHHHHHHHHHhhcC-CCCccceeeeeeec
Q 035862 70 ATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQ---GHKQWLAEVQFLGVV-SHPNLVKLLGYCST 145 (393)
Q Consensus 70 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l-~h~niv~~~~~~~~ 145 (393)
.-++|.+++.||+|+|++|++|+.+.++ +.||||++.+.... ..+.+..|-.+|.+| .||.|++|+-.|.+
T Consensus 71 ~~~DF~Fg~~lGeGSYStV~~A~~~~t~-----keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD 145 (604)
T KOG0592|consen 71 TPNDFKFGKILGEGSYSTVVLAREKATG-----KEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQD 145 (604)
T ss_pred ChhhcchhheeccccceeEEEeeecCCC-----ceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeec
Confidence 3568999999999999999999976544 46999999875332 233456788899999 69999999988887
Q ss_pred CCcccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEe
Q 035862 146 EDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLS 225 (393)
Q Consensus 146 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~ 225 (393)
+. .+|+|+||+++|+|.++| .+.+.+++..++.++.+|+.||+|||++ |||||||||+|||++.||+++|+
T Consensus 146 ~~----sLYFvLe~A~nGdll~~i--~K~Gsfde~caR~YAAeIldAleylH~~---GIIHRDlKPENILLd~dmhikIT 216 (604)
T KOG0592|consen 146 EE----SLYFVLEYAPNGDLLDLI--KKYGSFDETCARFYAAEILDALEYLHSN---GIIHRDLKPENILLDKDGHIKIT 216 (604)
T ss_pred cc----ceEEEEEecCCCcHHHHH--HHhCcchHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeEcCCCcEEEe
Confidence 77 569999999999999999 4557899999999999999999999999 99999999999999999999999
Q ss_pred eccCCccCCCCCCc---------c--ccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhh
Q 035862 226 DFGLAREGPTGDHT---------H--VSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQ 294 (393)
Q Consensus 226 Dfg~a~~~~~~~~~---------~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~ 294 (393)
|||.|..+...... . ....++||..|.+||++.....+..+|||+||||+|+|+.|.+||...++-...
T Consensus 217 DFGsAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~NeyliF 296 (604)
T KOG0592|consen 217 DFGSAKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYLIF 296 (604)
T ss_pred eccccccCChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHHHHH
Confidence 99999876543222 1 125689999999999999999999999999999999999999999876554332
Q ss_pred HHHHHHhhcCcCCcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 035862 295 KLLEWVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLK 356 (393)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~ 356 (393)
..+..+ .-.++.+.++.+.+|++++|..||.+|+++.+|.+|+.
T Consensus 297 qkI~~l------------------~y~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~HpF 340 (604)
T KOG0592|consen 297 QKIQAL------------------DYEFPEGFPEDARDLIKKLLVRDPSDRLTSQQIKAHPF 340 (604)
T ss_pred HHHHHh------------------cccCCCCCCHHHHHHHHHHHccCccccccHHHHhhCcc
Confidence 221111 11123345588999999999999999999999999853
No 20
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=5.7e-47 Score=328.24 Aligned_cols=274 Identities=24% Similarity=0.314 Sum_probs=218.7
Q ss_pred cCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCC--cccHHHHHHHHHHhhcCCCCccceeeeeeecCCcc
Q 035862 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG--LQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDER 149 (393)
Q Consensus 72 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 149 (393)
+.|+.++.|++|+||.||+|++..+ +.+||+|+++-.. ....-..++|+.+|.+++|||||.+-.+....+-.
T Consensus 76 ~efe~lnrI~EGtyGiVYRakdk~t-----~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d 150 (419)
T KOG0663|consen 76 EEFEKLNRIEEGTYGVVYRAKDKKT-----DEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMD 150 (419)
T ss_pred HHHHHHhhcccCcceeEEEeccCCc-----ceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccc
Confidence 4589999999999999999996544 4579999987543 22334567999999999999999999998876655
Q ss_pred cceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccC
Q 035862 150 GIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGL 229 (393)
Q Consensus 150 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~ 229 (393)
..|+|||||+. +|..++.... .++...++..++.|+++|++|||.+ .|+||||||+|+|++..|.+||+|||+
T Consensus 151 --~iy~VMe~~Eh-DLksl~d~m~-q~F~~~evK~L~~QlL~glk~lH~~---wilHRDLK~SNLLm~~~G~lKiaDFGL 223 (419)
T KOG0663|consen 151 --KIYIVMEYVEH-DLKSLMETMK-QPFLPGEVKTLMLQLLRGLKHLHDN---WILHRDLKTSNLLLSHKGILKIADFGL 223 (419)
T ss_pred --eeeeeHHHHHh-hHHHHHHhcc-CCCchHHHHHHHHHHHHHHHHHhhc---eeEecccchhheeeccCCcEEecccch
Confidence 46999999976 9999986655 4688999999999999999999999 999999999999999999999999999
Q ss_pred CccCCCCCCccccccccccCCccCcccccc-CCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcCCc
Q 035862 230 AREGPTGDHTHVSTAVVGTYGYAAPEYIET-GHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGK 308 (393)
Q Consensus 230 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 308 (393)
|+..... ....+..+-|.+|+|||++.+ ..|+..+|+||+|||+.||+++++.|.+.++-.+.+.+......|.+..
T Consensus 224 AR~ygsp--~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~i 301 (419)
T KOG0663|consen 224 AREYGSP--LKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAI 301 (419)
T ss_pred hhhhcCC--cccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCcccc
Confidence 9987654 234567789999999999877 5799999999999999999999999998877655544443333333210
Q ss_pred -----ccc--------cccCcccccccCHH-HHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHH
Q 035862 309 -----KFS--------MMIDPRLRNQYSIN-AARRVAKLADNCLKKNPEERPTMNQVVESLKLAV 359 (393)
Q Consensus 309 -----~~~--------~~~~~~~~~~~~~~-~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~~ 359 (393)
.+. ...-..++..+... .++...+|+..+|.+||.+|.|+.+.|+|-|..-
T Consensus 302 wpg~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h~~F~e 366 (419)
T KOG0663|consen 302 WPGYSELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKHEYFRE 366 (419)
T ss_pred CCCccccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhccccccc
Confidence 000 00001111112111 5688899999999999999999999999987764
No 21
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-46 Score=335.46 Aligned_cols=266 Identities=25% Similarity=0.359 Sum_probs=214.2
Q ss_pred cCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcc-cHHHHHHHHHHhhcCCCCccceeeeeeecCCccc
Q 035862 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQ-GHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERG 150 (393)
Q Consensus 72 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 150 (393)
+.|++...||.|..++||+|+....+. +||||++.-+... ..+.+.+|+..++.++||||++++..|..+.
T Consensus 26 ~~YeL~e~IG~G~sa~V~~A~c~p~~e-----~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~--- 97 (516)
T KOG0582|consen 26 KDYELQEVIGVGASAVVYLARCIPTNE-----VVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDS--- 97 (516)
T ss_pred cceeEEEEEeccceeEeeeeeecccCC-----EEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecc---
Confidence 569999999999999999999876554 6999999865433 3577899999999999999999999999887
Q ss_pred ceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCC
Q 035862 151 IQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLA 230 (393)
Q Consensus 151 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a 230 (393)
.+++||.||.+|++.+.+...-...+++..+..|++++++||.|||++ |.||||||+.||||+++|.|||+|||.+
T Consensus 98 -~LWvVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~---G~IHRdvKAgnILi~~dG~VkLadFgvs 173 (516)
T KOG0582|consen 98 -ELWVVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQN---GHIHRDVKAGNILIDSDGTVKLADFGVS 173 (516)
T ss_pred -eeEEeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhc---CceecccccccEEEcCCCcEEEcCceee
Confidence 569999999999999999877777899999999999999999999999 9999999999999999999999999988
Q ss_pred ccCCCCCCc-ccc-ccccccCCccCccccc--cCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcC
Q 035862 231 REGPTGDHT-HVS-TAVVGTYGYAAPEYIE--TGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPAD 306 (393)
Q Consensus 231 ~~~~~~~~~-~~~-~~~~gt~~y~aPE~~~--~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~ 306 (393)
..+...+.. ... ...+||+.|||||++. ...|+.|+||||||++..||.+|..||....+.. -+...+.+.|..
T Consensus 174 a~l~~~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmk--vLl~tLqn~pp~ 251 (516)
T KOG0582|consen 174 ASLFDSGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMK--VLLLTLQNDPPT 251 (516)
T ss_pred eeecccCceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHH--HHHHHhcCCCCC
Confidence 765443322 122 5679999999999953 3579999999999999999999999998664421 111112111110
Q ss_pred CcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 035862 307 GKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKL 357 (393)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~ 357 (393)
.. . ..+........+..+..++..||.+||.+|||++++++|-+.
T Consensus 252 ~~--t----~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh~FF 296 (516)
T KOG0582|consen 252 LL--T----SGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKHAFF 296 (516)
T ss_pred cc--c----ccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhccHHH
Confidence 00 0 011111122355689999999999999999999999998664
No 22
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=1.8e-46 Score=351.28 Aligned_cols=269 Identities=28% Similarity=0.428 Sum_probs=210.3
Q ss_pred hcCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCc-ccHHHHHHHHHHhhcC-CCCccceeeeeeecCCc
Q 035862 71 TNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL-QGHKQWLAEVQFLGVV-SHPNLVKLLGYCSTEDE 148 (393)
Q Consensus 71 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~ 148 (393)
.++|++.+.||+|+||.||+|.+...........||+|++..... .....+.+|+.++..+ +||||+++++++...+.
T Consensus 6 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~ 85 (338)
T cd05102 6 RDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPNG 85 (338)
T ss_pred hhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCC
Confidence 357999999999999999999875444445566799999875432 2345688999999999 79999999998875443
Q ss_pred ccceEEEEEeecCCCChHHHHhhcC-------------------------------------------------------
Q 035862 149 RGIQRLLVYEYMPNRSLEDRLFSRA------------------------------------------------------- 173 (393)
Q Consensus 149 ~~~~~~lv~e~~~~~~L~~~l~~~~------------------------------------------------------- 173 (393)
..++||||+++|+|.+++....
T Consensus 86 ---~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (338)
T cd05102 86 ---PLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQE 162 (338)
T ss_pred ---ceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchh
Confidence 4589999999999999986421
Q ss_pred -----CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCCccCCCCCCcccccccccc
Q 035862 174 -----QPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGT 248 (393)
Q Consensus 174 -----~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt 248 (393)
...+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++...............++
T Consensus 163 ~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~ 239 (338)
T cd05102 163 TDDLWKSPLTMEDLICYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLP 239 (338)
T ss_pred ccccccCCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCC
Confidence 12477788899999999999999998 9999999999999999999999999999764332222222334566
Q ss_pred CCccCccccccCCCCchhhHHHHHHHHHHHHh-CCCccCCCCchhhhHHHHHHhhcCcCCcccccccCcccccccCHHHH
Q 035862 249 YGYAAPEYIETGHLKSQSDIWSFGVVLYEILT-GRRVLERNRPTMEQKLLEWVKQFPADGKKFSMMIDPRLRNQYSINAA 327 (393)
Q Consensus 249 ~~y~aPE~~~~~~~~~~~DiwslGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (393)
..|+|||++.+..++.++|||||||++|||++ |..||........ +...... +. ....+..++
T Consensus 240 ~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~--~~~~~~~----~~----------~~~~~~~~~ 303 (338)
T cd05102 240 LKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEE--FCQRLKD----GT----------RMRAPENAT 303 (338)
T ss_pred ccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHH--HHHHHhc----CC----------CCCCCCCCC
Confidence 78999999999999999999999999999997 9999976443211 1111110 00 001122345
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhh
Q 035862 328 RRVAKLADNCLKKNPEERPTMNQVVESLKLAVQE 361 (393)
Q Consensus 328 ~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~~~~ 361 (393)
.++.+++.+||+.||.+|||+.++++.|+.++++
T Consensus 304 ~~l~~li~~cl~~dp~~RPs~~el~~~l~~~~~~ 337 (338)
T cd05102 304 PEIYRIMLACWQGDPKERPTFSALVEILGDLLQE 337 (338)
T ss_pred HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 7899999999999999999999999999988764
No 23
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.5e-47 Score=343.28 Aligned_cols=278 Identities=26% Similarity=0.375 Sum_probs=215.6
Q ss_pred ccHHHHHHHhcCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcc--------------cHHHHHHHHHH
Q 035862 62 FDMQELREATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQ--------------GHKQWLAEVQF 127 (393)
Q Consensus 62 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~--------------~~~~~~~E~~~ 127 (393)
++..+-....|+|+++..||+|.||.|-+|++. ..+..||+|++.+.... ..+...+|+.+
T Consensus 87 ~~~~~~~k~lNqy~l~~eiG~G~yGkVkLar~~-----~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIai 161 (576)
T KOG0585|consen 87 YDDDQDRKQLNQYELIKEIGSGQYGKVKLARDE-----VDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAI 161 (576)
T ss_pred ecCcccceehhheehhhhhcCCccceEEEEeec-----CCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHH
Confidence 333344556789999999999999999999954 44567999999764321 12467899999
Q ss_pred hhcCCCCccceeeeeeecCCcccceEEEEEeecCCCChHHHHhhcCCCC-CCHHHHHHHHHHHHHHHHHhhcCCCCCeEe
Q 035862 128 LGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPT-LPWKTRLEIILGAAEGLAYLHEGLEIQVIY 206 (393)
Q Consensus 128 l~~l~h~niv~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~-~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH 206 (393)
|+++.|||||+|+++..+.... .+|||+|||..|.+... ..... +.+.+++.++++++.||+|||.+ ||+|
T Consensus 162 lKkl~H~nVV~LiEvLDDP~s~--~~YlVley~s~G~v~w~---p~d~~els~~~Ar~ylrDvv~GLEYLH~Q---giiH 233 (576)
T KOG0585|consen 162 LKKLHHPNVVKLIEVLDDPESD--KLYLVLEYCSKGEVKWC---PPDKPELSEQQARKYLRDVVLGLEYLHYQ---GIIH 233 (576)
T ss_pred HHhcCCcCeeEEEEeecCcccC--ceEEEEEeccCCccccC---CCCcccccHHHHHHHHHHHHHHHHHHHhc---Ceec
Confidence 9999999999999998776665 67999999998887643 33344 89999999999999999999999 9999
Q ss_pred ccCCCCCeEeCCCCceEEeeccCCccCCCCCC---ccccccccccCCccCccccccCC----CCchhhHHHHHHHHHHHH
Q 035862 207 RDFKTSNVLLDGNFKPKLSDFGLAREGPTGDH---THVSTAVVGTYGYAAPEYIETGH----LKSQSDIWSFGVVLYEIL 279 (393)
Q Consensus 207 ~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~---~~~~~~~~gt~~y~aPE~~~~~~----~~~~~DiwslGvil~ell 279 (393)
|||||.|+||+++|++||+|||.+.....+.. .......+|||.|+|||++.++. .+.+.||||+||+||.|+
T Consensus 234 RDIKPsNLLl~~~g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCll 313 (576)
T KOG0585|consen 234 RDIKPSNLLLSSDGTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLL 313 (576)
T ss_pred cccchhheEEcCCCcEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhh
Confidence 99999999999999999999999986533211 11223479999999999987632 356789999999999999
Q ss_pred hCCCccCCCCchhhhHHHHHHhhcCcCCcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHH
Q 035862 280 TGRRVLERNRPTMEQKLLEWVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAV 359 (393)
Q Consensus 280 tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~~ 359 (393)
.|+.||-++... .+.. .+++..+.-.-..+..+++.+||.+||++||++|.++.+|..|+|-..
T Consensus 314 fG~~PF~~~~~~---~l~~-------------KIvn~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~ 377 (576)
T KOG0585|consen 314 FGQLPFFDDFEL---ELFD-------------KIVNDPLEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVTR 377 (576)
T ss_pred hccCCcccchHH---HHHH-------------HHhcCcccCCCcccccHHHHHHHHHHhhcChhheeehhhheecceecc
Confidence 999999765321 1111 112222211112245688999999999999999999999999999876
Q ss_pred hhhcCCCCC
Q 035862 360 QESEQGSSS 368 (393)
Q Consensus 360 ~~~~~~~~~ 368 (393)
.......+.
T Consensus 378 ~g~~~~~s~ 386 (576)
T KOG0585|consen 378 DGDSPQSSE 386 (576)
T ss_pred CCCCCccCC
Confidence 544443333
No 24
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-47 Score=335.24 Aligned_cols=276 Identities=26% Similarity=0.372 Sum_probs=216.2
Q ss_pred hcCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecC--CCcccHHHHHHHHHHhhcCCCCccceeeeeeec-CC
Q 035862 71 TNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNN--HGLQGHKQWLAEVQFLGVVSHPNLVKLLGYCST-ED 147 (393)
Q Consensus 71 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-~~ 147 (393)
...|..++.||.|+||.|+.|.+..++. .||+|++.. ......++..+|+++|+.++|+||+.+++++.. ..
T Consensus 21 ~~~y~~~~~iG~GAyGvVcsA~~~~t~~-----~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~ 95 (359)
T KOG0660|consen 21 PRYYVLIEPIGRGAYGVVCSAKDKRTGE-----KVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSR 95 (359)
T ss_pred cceecccccccCcceeeEEEEEEcCCCC-----EeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccc
Confidence 3456668899999999999999876554 599999983 344556778899999999999999999999876 22
Q ss_pred cccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeec
Q 035862 148 ERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDF 227 (393)
Q Consensus 148 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Df 227 (393)
....-.|+|+|+| +.+|...+ +.+..++...+..+++||+.||.|+|+. +++||||||.|+|++.+..+||+||
T Consensus 96 ~~f~DvYiV~elM-etDL~~ii--k~~~~L~d~H~q~f~YQiLrgLKyiHSA---nViHRDLKPsNll~n~~c~lKI~DF 169 (359)
T KOG0660|consen 96 DKFNDVYLVFELM-ETDLHQII--KSQQDLTDDHAQYFLYQILRGLKYIHSA---NVIHRDLKPSNLLLNADCDLKICDF 169 (359)
T ss_pred cccceeEEehhHH-hhHHHHHH--HcCccccHHHHHHHHHHHHHhcchhhcc---cccccccchhheeeccCCCEEeccc
Confidence 2233569999999 56999988 4555699999999999999999999999 9999999999999999999999999
Q ss_pred cCCccCCCCCCccccccccccCCccCccccc-cCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcC
Q 035862 228 GLAREGPTGDHTHVSTAVVGTYGYAAPEYIE-TGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPAD 306 (393)
Q Consensus 228 g~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~ 306 (393)
|+|+...........+.++.|.+|.|||++. ...|+...||||+|||+.||++|++.|.+.+...+-.++......|.+
T Consensus 170 GLAR~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~ 249 (359)
T KOG0660|consen 170 GLARYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSE 249 (359)
T ss_pred cceeeccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCH
Confidence 9999875543333457889999999999775 478999999999999999999999999887655443333222222211
Q ss_pred Cccccccc---------------CcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHH
Q 035862 307 GKKFSMMI---------------DPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAV 359 (393)
Q Consensus 307 ~~~~~~~~---------------~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~~ 359 (393)
..+..+. ...+...++ ++++.+.+|+.+||..||.+|+|++|++.|+....
T Consensus 250 -e~l~~i~s~~ar~yi~slp~~p~~~f~~~fp-~a~p~AidLlekmL~fdP~kRita~eAL~hPYl~~ 315 (359)
T KOG0660|consen 250 -EDLQKIRSEKARPYIKSLPQIPKQPFSSIFP-NANPLAIDLLEKMLVFDPKKRITAEEALAHPYLAP 315 (359)
T ss_pred -HHHHHhccHHHHHHHHhCCCCCCCCHHHHcC-CCCHHHHHHHHHHhccCccccCCHHHHhcChhhhh
Confidence 0010000 001111111 56788999999999999999999999999986543
No 25
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=6.8e-47 Score=322.92 Aligned_cols=250 Identities=26% Similarity=0.381 Sum_probs=209.9
Q ss_pred hcCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcccH---HHHHHHHHHhhcCCCCccceeeeeeecCC
Q 035862 71 TNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGH---KQWLAEVQFLGVVSHPNLVKLLGYCSTED 147 (393)
Q Consensus 71 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~---~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 147 (393)
.++|++++.||.|+||.|.+++.+.+ +..+|+|++.+...... +...+|..+|+.+.||.++++++.+.+.+
T Consensus 43 l~dfe~~~tlGtGSFGrV~LVr~k~~-----g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~ 117 (355)
T KOG0616|consen 43 LQDFERLKTLGTGSFGRVHLVREKHS-----GNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNS 117 (355)
T ss_pred hhhhhheeeeccCccceEEEEEEccC-----CceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCC
Confidence 45699999999999999999997644 44699999987644333 34578999999999999999998888776
Q ss_pred cccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeec
Q 035862 148 ERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDF 227 (393)
Q Consensus 148 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Df 227 (393)
++++||||++||.|..++ ++.+.+++..++.++.||+.||+|||+. +|++|||||+|||+|.+|.+||+||
T Consensus 118 ----~lymvmeyv~GGElFS~L--rk~~rF~e~~arFYAAeivlAleylH~~---~iiYRDLKPENiLlD~~G~iKitDF 188 (355)
T KOG0616|consen 118 ----NLYMVMEYVPGGELFSYL--RKSGRFSEPHARFYAAEIVLALEYLHSL---DIIYRDLKPENLLLDQNGHIKITDF 188 (355)
T ss_pred ----eEEEEEeccCCccHHHHH--HhcCCCCchhHHHHHHHHHHHHHHHHhc---CeeeccCChHHeeeccCCcEEEEec
Confidence 679999999999999999 5556799999999999999999999999 9999999999999999999999999
Q ss_pred cCCccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcCC
Q 035862 228 GLAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADG 307 (393)
Q Consensus 228 g~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 307 (393)
|+|...... ..+.||||.|+|||.++...|..++|.|||||++|||+.|.+||....+... ....+..
T Consensus 189 GFAK~v~~r-----T~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~i--Y~KI~~~----- 256 (355)
T KOG0616|consen 189 GFAKRVSGR-----TWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQI--YEKILEG----- 256 (355)
T ss_pred cceEEecCc-----EEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHHH--HHHHHhC-----
Confidence 999875432 3567999999999999999999999999999999999999999987766221 1111110
Q ss_pred cccccccCcccccccCHHHHHHHHHHHHHhcccCCCCC-----CCHHHHHHHHHH
Q 035862 308 KKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEER-----PTMNQVVESLKL 357 (393)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R-----ps~~~~l~~l~~ 357 (393)
.-.+|...+.++.+|++++|+.|-.+| ....+|..|.|.
T Consensus 257 -----------~v~fP~~fs~~~kdLl~~LL~vD~t~R~gnlknG~~dIk~H~wF 300 (355)
T KOG0616|consen 257 -----------KVKFPSYFSSDAKDLLKKLLQVDLTKRFGNLKNGVEDIKNHPWF 300 (355)
T ss_pred -----------cccCCcccCHHHHHHHHHHHhhhhHhhhcCcCCCccccccCccc
Confidence 112334567889999999999999999 456688888664
No 26
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=5.3e-47 Score=314.54 Aligned_cols=254 Identities=28% Similarity=0.427 Sum_probs=217.2
Q ss_pred hcCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCc---ccHHHHHHHHHHhhcCCCCccceeeeeeecCC
Q 035862 71 TNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL---QGHKQWLAEVQFLGVVSHPNLVKLLGYCSTED 147 (393)
Q Consensus 71 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 147 (393)
.++|++.+.||+|.||.||+|+.+ .+..+||+|++.++.. ....++.+|++|-+.++||||+++|++|.++.
T Consensus 21 l~dfeigr~LgkgkFG~vYlarek-----ks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~ 95 (281)
T KOG0580|consen 21 LDDFEIGRPLGKGKFGNVYLAREK-----KSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSK 95 (281)
T ss_pred hhhccccccccCCccccEeEeeec-----cCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccc
Confidence 356999999999999999999954 3456899999977532 33467889999999999999999999999887
Q ss_pred cccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeec
Q 035862 148 ERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDF 227 (393)
Q Consensus 148 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Df 227 (393)
..|+++||..+|.|...|.......+++...+.++.|++.||.|+|.. +++||||||+|+|++.+|.+||+||
T Consensus 96 ----riyLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k---~VIhRdiKpenlLlg~~~~lkiAdf 168 (281)
T KOG0580|consen 96 ----RIYLILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLK---RVIHRDIKPENLLLGSAGELKIADF 168 (281)
T ss_pred ----eeEEEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccC---CcccCCCCHHHhccCCCCCeeccCC
Confidence 459999999999999999877788899999999999999999999998 9999999999999999999999999
Q ss_pred cCCccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcCC
Q 035862 228 GLAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADG 307 (393)
Q Consensus 228 g~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 307 (393)
|.+...+.. .....+||..|.|||...+..++..+|+|++|++.||++.|.+||+..........+..+
T Consensus 169 GwsV~~p~~----kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI~k~------- 237 (281)
T KOG0580|consen 169 GWSVHAPSN----KRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRIRKV------- 237 (281)
T ss_pred CceeecCCC----CceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHHHHc-------
Confidence 999875422 345689999999999999999999999999999999999999999876533222211111
Q ss_pred cccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q 035862 308 KKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLA 358 (393)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~ 358 (393)
.-.++..++.++.++|.+||.++|.+|.+..++++|+|-.
T Consensus 238 -----------~~~~p~~is~~a~dlI~~ll~~~p~~r~~l~~v~~hpwI~ 277 (281)
T KOG0580|consen 238 -----------DLKFPSTISGGAADLISRLLVKNPIERLALTEVMDHPWIV 277 (281)
T ss_pred -----------cccCCcccChhHHHHHHHHhccCccccccHHHHhhhHHHH
Confidence 1112345678899999999999999999999999999865
No 27
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-47 Score=341.77 Aligned_cols=249 Identities=27% Similarity=0.413 Sum_probs=210.3
Q ss_pred CCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCC-cccHHHHHHHHHHhhcCCCCccceeeeeeecCCcccc
Q 035862 73 GFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG-LQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGI 151 (393)
Q Consensus 73 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 151 (393)
.|....+||+|.||.||+|.+..+.+ .||+|++.-.. ......+.+|+.+|.+++++||.++|+.+....
T Consensus 14 ~~~~~~~IgrGsfG~Vyk~~d~~t~k-----~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~---- 84 (467)
T KOG0201|consen 14 LYTKLELIGRGSFGEVYKAIDNKTKK-----VVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGT---- 84 (467)
T ss_pred ccccchhccccccceeeeeeeccccc-----eEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecc----
Confidence 47777899999999999999765554 69999997653 234567788999999999999999999998777
Q ss_pred eEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCCc
Q 035862 152 QRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAR 231 (393)
Q Consensus 152 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~ 231 (393)
.++++||||.||++.+.+ .....+.+..+..++++++.|+.|||.+ +.+|||||+.|||+..+|.+||+|||.+.
T Consensus 85 ~LwiiMey~~gGsv~~lL--~~~~~~~E~~i~~ilre~l~~l~ylH~~---~kiHrDIKaanil~s~~g~vkl~DfgVa~ 159 (467)
T KOG0201|consen 85 KLWIIMEYCGGGSVLDLL--KSGNILDEFEIAVILREVLKGLDYLHSE---KKIHRDIKAANILLSESGDVKLADFGVAG 159 (467)
T ss_pred cHHHHHHHhcCcchhhhh--ccCCCCccceeeeehHHHHHHhhhhhhc---ceecccccccceeEeccCcEEEEecceee
Confidence 559999999999999998 4445558888889999999999999999 99999999999999999999999999998
Q ss_pred cCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcCCcccc
Q 035862 232 EGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKFS 311 (393)
Q Consensus 232 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (393)
........ ...++||+.|||||++.+..|+.|+||||||++.+||++|.+|+....+. ..-
T Consensus 160 ql~~~~~r--r~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPm-----------------rvl 220 (467)
T KOG0201|consen 160 QLTNTVKR--RKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPM-----------------RVL 220 (467)
T ss_pred eeechhhc--cccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcc-----------------eEE
Confidence 76554332 36789999999999999889999999999999999999999999765431 111
Q ss_pred cccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 035862 312 MMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVES 354 (393)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~ 354 (393)
..+.+...+.....+++.+++|+..||++||+.||++.++++|
T Consensus 221 flIpk~~PP~L~~~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh 263 (467)
T KOG0201|consen 221 FLIPKSAPPRLDGDFSPPFKEFVEACLDKNPEFRPSAKELLKH 263 (467)
T ss_pred EeccCCCCCccccccCHHHHHHHHHHhhcCcccCcCHHHHhhh
Confidence 1233333333444678899999999999999999999999998
No 28
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=4.5e-46 Score=359.23 Aligned_cols=272 Identities=31% Similarity=0.490 Sum_probs=231.3
Q ss_pred cCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcc-cHHHHHHHHHHhhcCCCCccceeeeeeecCCccc
Q 035862 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQ-GHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERG 150 (393)
Q Consensus 72 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 150 (393)
.+-+..+.||+|+||.||+|....-........||||.++..... .+.+|.+|++++..++|||||+|+|+|...+..
T Consensus 486 ~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~- 564 (774)
T KOG1026|consen 486 SDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDPL- 564 (774)
T ss_pred hheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCee-
Confidence 345667789999999999999776666678899999999987655 778899999999999999999999999999854
Q ss_pred ceEEEEEeecCCCChHHHHhhcC------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCC
Q 035862 151 IQRLLVYEYMPNRSLEDRLFSRA------------QPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDG 218 (393)
Q Consensus 151 ~~~~lv~e~~~~~~L~~~l~~~~------------~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~ 218 (393)
|+|+|||..|+|.+||.... ...++..+.+.|+.||+.||.||-++ .+|||||..+|+||.+
T Consensus 565 ---~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~---~FVHRDLATRNCLVge 638 (774)
T KOG1026|consen 565 ---CMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSH---HFVHRDLATRNCLVGE 638 (774)
T ss_pred ---EEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---cccccchhhhhceecc
Confidence 99999999999999996432 12378889999999999999999998 9999999999999999
Q ss_pred CCceEEeeccCCccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHh-CCCccCCCCchhhhHHH
Q 035862 219 NFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILT-GRRVLERNRPTMEQKLL 297 (393)
Q Consensus 219 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ellt-g~~pf~~~~~~~~~~~~ 297 (393)
+..|||+|||+++.....+.++......-..+|||||.+..+.|+.++||||+||+|||+++ |.-||.+.... .++
T Consensus 639 ~l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~---EVI 715 (774)
T KOG1026|consen 639 NLVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQ---EVI 715 (774)
T ss_pred ceEEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchH---HHH
Confidence 99999999999998777777665555566789999999999999999999999999999999 88888765433 233
Q ss_pred HHHhhcCcCCcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhhcCCCC
Q 035862 298 EWVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQESEQGSS 367 (393)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~~~~~~~~~~ 367 (393)
+..+. .. ....+.+++.+++.|+..||+..|.+||+++||-..|....+..+.-++
T Consensus 716 e~i~~-------------g~-lL~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~~s~~~~~ 771 (774)
T KOG1026|consen 716 ECIRA-------------GQ-LLSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQASPKYSS 771 (774)
T ss_pred HHHHc-------------CC-cccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHhcCccccc
Confidence 32221 12 2456678899999999999999999999999999999998876655443
No 29
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=6.6e-45 Score=320.65 Aligned_cols=275 Identities=24% Similarity=0.325 Sum_probs=212.9
Q ss_pred cCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCc--ccHHHHHHHHHHhhcCCCCc-cceeeeeeecCCc
Q 035862 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL--QGHKQWLAEVQFLGVVSHPN-LVKLLGYCSTEDE 148 (393)
Q Consensus 72 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~n-iv~~~~~~~~~~~ 148 (393)
..|..+++||+|+||+||+|+...++ ..||+|++.-... .......+|+.+|+.++|+| |+.+++++.....
T Consensus 11 ~~~~~~eklGeGtyg~Vykar~~~~g-----~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~ 85 (323)
T KOG0594|consen 11 FDYEKVEKLGEGTYGVVYKARSKRTG-----KFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNN 85 (323)
T ss_pred HHHHHHHHhCCCCceEEEEEEEecCC-----CEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeeccc
Confidence 34777788999999999999976554 4699999976543 24456789999999999999 9999999977662
Q ss_pred --ccceEEEEEeecCCCChHHHHhhcCC--CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEE
Q 035862 149 --RGIQRLLVYEYMPNRSLEDRLFSRAQ--PTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKL 224 (393)
Q Consensus 149 --~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl 224 (393)
....+++|+||++ .+|..++..... ..++...++.++.||+.||+|||++ +|+||||||.||||+++|.+||
T Consensus 86 ~~~~~~l~lvfe~~d-~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~---~IlHRDLKPQNlLi~~~G~lKl 161 (323)
T KOG0594|consen 86 HRGIGKLYLVFEFLD-RDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSH---GILHRDLKPQNLLISSSGVLKL 161 (323)
T ss_pred ccccceEEEEEEeec-ccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCcceEEECCCCcEee
Confidence 2235689999995 499999965543 3678889999999999999999999 9999999999999999999999
Q ss_pred eeccCCccCCCCCCccccccccccCCccCccccccC-CCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhc
Q 035862 225 SDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIETG-HLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQF 303 (393)
Q Consensus 225 ~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~ 303 (393)
+|||+|+....... ..+..++|.+|+|||++.+. .|+..+||||+|||++||+++++.|.+..+..+...+......
T Consensus 162 aDFGlAra~~ip~~--~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGt 239 (323)
T KOG0594|consen 162 ADFGLARAFSIPMR--TYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGT 239 (323)
T ss_pred eccchHHHhcCCcc--cccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCC
Confidence 99999996543332 34677899999999999876 7999999999999999999999999987775444333333333
Q ss_pred CcCCccccccc-----Ccccccc-----cCH---HHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q 035862 304 PADGKKFSMMI-----DPRLRNQ-----YSI---NAARRVAKLADNCLKKNPEERPTMNQVVESLKLA 358 (393)
Q Consensus 304 ~~~~~~~~~~~-----~~~~~~~-----~~~---~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~ 358 (393)
|... .+.... ....... ... ....+..+++.+||+++|.+|.|++.++.|....
T Consensus 240 P~e~-~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~ 306 (323)
T KOG0594|consen 240 PNEK-DWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTHPYFS 306 (323)
T ss_pred CCcc-CCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcChhhc
Confidence 3221 000000 0001000 111 1224789999999999999999999999996654
No 30
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=9.6e-45 Score=331.46 Aligned_cols=256 Identities=27% Similarity=0.433 Sum_probs=206.2
Q ss_pred CCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCc---ccHHHHHHHHHHhhcCCCCccceeeeeeecCCcc
Q 035862 73 GFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL---QGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDER 149 (393)
Q Consensus 73 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 149 (393)
.|+..+.||+|+||.||+|.+..++ ..||+|.+..... .....+.+|+.+++.++|+||+++++++...+
T Consensus 1 ~f~~~~~lg~G~~g~V~~~~~~~~~-----~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~-- 73 (285)
T cd05631 1 TFRHYRVLGKGGFGEVCACQVRATG-----KMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKD-- 73 (285)
T ss_pred CceEEEEEecCCCEEEEEEEEecCC-----ceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCC--
Confidence 3778899999999999999976444 4699998865422 22345678999999999999999999988766
Q ss_pred cceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccC
Q 035862 150 GIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGL 229 (393)
Q Consensus 150 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~ 229 (393)
..++||||+.+++|.+++.......+++..+..++.|++.||+|||+. +|+||||||+|||+++++.++|+|||+
T Consensus 74 --~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nill~~~~~~kl~Dfg~ 148 (285)
T cd05631 74 --ALCLVLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRE---RIVYRDLKPENILLDDRGHIRISDLGL 148 (285)
T ss_pred --eEEEEEEecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeCCC
Confidence 569999999999999888655555789999999999999999999998 999999999999999999999999999
Q ss_pred CccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhh-HHHHHHhhcCcCCc
Q 035862 230 AREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQ-KLLEWVKQFPADGK 308 (393)
Q Consensus 230 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~-~~~~~~~~~~~~~~ 308 (393)
+....... ......|+..|+|||++.+..++.++|||||||++|+|++|+.||......... ........
T Consensus 149 ~~~~~~~~---~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~------ 219 (285)
T cd05631 149 AVQIPEGE---TVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKE------ 219 (285)
T ss_pred cEEcCCCC---eecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhhc------
Confidence 97643322 123457899999999999999999999999999999999999999865432211 11111100
Q ss_pred ccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCC-----HHHHHHHHHHH
Q 035862 309 KFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPT-----MNQVVESLKLA 358 (393)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps-----~~~~l~~l~~~ 358 (393)
....++...+.++.+|+.+||+.||.+||+ ++++++|.|..
T Consensus 220 ---------~~~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h~~~~ 265 (285)
T cd05631 220 ---------DQEEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQHPIFK 265 (285)
T ss_pred ---------ccccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcCHhhc
Confidence 011122345678999999999999999997 89999998753
No 31
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2.8e-46 Score=331.28 Aligned_cols=254 Identities=22% Similarity=0.379 Sum_probs=211.7
Q ss_pred hcCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCccc---HHHHHHHHHHhhcCCCCccceeeeeeecCC
Q 035862 71 TNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQG---HKQWLAEVQFLGVVSHPNLVKLLGYCSTED 147 (393)
Q Consensus 71 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 147 (393)
..+|++.+.||.|+||.|-+|+.. ..+..||||.+++..... .-.+.+|++|++.++||||+.+|++|...+
T Consensus 52 kHRyE~~etLGkGTYGKVk~A~e~-----~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkd 126 (668)
T KOG0611|consen 52 KHRYEITETLGKGTYGKVKLAYEH-----KSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKD 126 (668)
T ss_pred hhHHHHHHHhcCCcccceeehhhc-----cCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCc
Confidence 457999999999999999999843 345679999998764433 344679999999999999999999999888
Q ss_pred cccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeec
Q 035862 148 ERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDF 227 (393)
Q Consensus 148 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Df 227 (393)
.+++||||..+|.|.+|+ ...+.+++..++.+++||++|+.|+|.+ +++|||||.+|||+|+++++||+||
T Consensus 127 ----KIvivMEYaS~GeLYDYi--Ser~~LsErEaRhfFRQIvSAVhYCHkn---rVvHRDLKLENILLD~N~NiKIADF 197 (668)
T KOG0611|consen 127 ----KIVIVMEYASGGELYDYI--SERGSLSEREARHFFRQIVSAVHYCHKN---RVVHRDLKLENILLDQNNNIKIADF 197 (668)
T ss_pred ----eEEEEEEecCCccHHHHH--HHhccccHHHHHHHHHHHHHHHHHHhhc---cceecccchhheeecCCCCeeeecc
Confidence 459999999999999999 4556799999999999999999999999 9999999999999999999999999
Q ss_pred cCCccCCCCCCccccccccccCCccCccccccCCCC-chhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcC
Q 035862 228 GLAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLK-SQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPAD 306 (393)
Q Consensus 228 g~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~ 306 (393)
|++..+.... ....+||++-|.+||.+.+..|. +.+|-|||||+||-|..|..||++.+.. ..++++..
T Consensus 198 GLSNly~~~k---fLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk------~lvrQIs~- 267 (668)
T KOG0611|consen 198 GLSNLYADKK---FLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHK------RLVRQISR- 267 (668)
T ss_pred chhhhhcccc---HHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHH------HHHHHhhc-
Confidence 9998765433 34678999999999999998884 6899999999999999999999876432 12222111
Q ss_pred CcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHh
Q 035862 307 GKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQ 360 (393)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~~~ 360 (393)
..++. +.-+.++.-||+.||..+|++|.|+.+|..|.|.-+.
T Consensus 268 ---------GaYrE---P~~PSdA~gLIRwmLmVNP~RRATieDiAsHWWvNwg 309 (668)
T KOG0611|consen 268 ---------GAYRE---PETPSDASGLIRWMLMVNPERRATIEDIASHWWVNWG 309 (668)
T ss_pred ---------ccccC---CCCCchHHHHHHHHHhcCcccchhHHHHhhhheeecc
Confidence 01110 1123567789999999999999999999999997554
No 32
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=4.7e-46 Score=327.52 Aligned_cols=268 Identities=27% Similarity=0.368 Sum_probs=209.6
Q ss_pred CCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcccHHHHHHHHHHhhcCCCCccceeeeeeecCCcc-cc
Q 035862 73 GFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDER-GI 151 (393)
Q Consensus 73 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~-~~ 151 (393)
.|...+++|.|+||.||+|....+. ..||||+.-.+.. .-.+|+++|+.+.|||||++.-+|...... ..
T Consensus 25 ~~~~~~liG~GsFg~Vyq~~~~e~~-----~~vAIKKv~~d~r----~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~ 95 (364)
T KOG0658|consen 25 SYEAVRLIGSGSFGVVYQAKLRETE-----EEVAIKKVLQDKR----YKNRELQIMRKLDHPNIVRLLYFFSSSTESDEV 95 (364)
T ss_pred EEEeeEEEeecccceEEEEEEcCCC-----ceeEEEEecCCCC----cCcHHHHHHHhcCCcCeeeEEEEEEecCCCchh
Confidence 4777889999999999999987654 3599998765432 223699999999999999999888766555 45
Q ss_pred eEEEEEeecCCCChHHHHhh--cCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCC-CceEEeecc
Q 035862 152 QRLLVYEYMPNRSLEDRLFS--RAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGN-FKPKLSDFG 228 (393)
Q Consensus 152 ~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~-~~~kl~Dfg 228 (393)
++.+||||++. +|.++++. ..+..++...++-+..||++||.|||+. ||+||||||.|+|+|.+ |.+||||||
T Consensus 96 ~lnlVleymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~---~IcHRDIKPqNlLvD~~tg~LKicDFG 171 (364)
T KOG0658|consen 96 YLNLVLEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSH---GICHRDIKPQNLLVDPDTGVLKICDFG 171 (364)
T ss_pred HHHHHHHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhc---CcccCCCChheEEEcCCCCeEEeccCC
Confidence 77899999955 99998853 2356688888999999999999999998 99999999999999876 999999999
Q ss_pred CCccCCCCCCccccccccccCCccCcccccc-CCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcCC
Q 035862 229 LAREGPTGDHTHVSTAVVGTYGYAAPEYIET-GHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADG 307 (393)
Q Consensus 229 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 307 (393)
.|+....++.. .++.+|..|+|||++.+ ..|+.+.||||.||++.||+-|++.|.+.+...+...+-.+...|...
T Consensus 172 SAK~L~~~epn---iSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e 248 (364)
T KOG0658|consen 172 SAKVLVKGEPN---ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTRE 248 (364)
T ss_pred cceeeccCCCc---eeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHH
Confidence 99987665533 56789999999998876 579999999999999999999999999865544433222222222211
Q ss_pred -----------cccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 035862 308 -----------KKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLK 356 (393)
Q Consensus 308 -----------~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~ 356 (393)
..+..+....+........++++.+|+.++|.++|.+|.++.+++.|..
T Consensus 249 ~I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~f 308 (364)
T KOG0658|consen 249 DIKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAHPF 308 (364)
T ss_pred HHhhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcchh
Confidence 0111111111111233356789999999999999999999999999853
No 33
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=8.6e-46 Score=346.41 Aligned_cols=260 Identities=25% Similarity=0.369 Sum_probs=215.4
Q ss_pred cCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCc---ccHHHHHHHHHHhhcCCCCccceeeeeeecCCc
Q 035862 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL---QGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDE 148 (393)
Q Consensus 72 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 148 (393)
+-|..++.||.|+-|.|-+|++..+++ .+|||++.+... .....+.+|+-||+.+.|||++.+|+++....
T Consensus 12 GpwkLgkTLG~Gstg~vrlakh~~TGq-----laaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~- 85 (786)
T KOG0588|consen 12 GPWKLGKTLGKGSTGCVRLAKHAETGQ-----LAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQ- 85 (786)
T ss_pred cceeccccccCCCCceehhhhcccccc-----eeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCc-
Confidence 348888999999999999999765554 599999976521 22344678999999999999999999998777
Q ss_pred ccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeecc
Q 035862 149 RGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFG 228 (393)
Q Consensus 149 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg 228 (393)
++|+|.||++||-|.+++ ...+++++..+..++.||+.|+.|||.. +|+|||+||+|+|++..++|||+|||
T Consensus 86 ---~lylvlEyv~gGELFdyl--v~kG~l~e~eaa~ff~QIi~gv~yCH~~---~icHRDLKpENlLLd~~~nIKIADFG 157 (786)
T KOG0588|consen 86 ---HLYLVLEYVPGGELFDYL--VRKGPLPEREAAHFFRQILDGVSYCHAF---NICHRDLKPENLLLDVKNNIKIADFG 157 (786)
T ss_pred ---eEEEEEEecCCchhHHHH--HhhCCCCCHHHHHHHHHHHHHHHHHhhh---cceeccCCchhhhhhcccCEeeeccc
Confidence 679999999999999999 5567899999999999999999999998 99999999999999999999999999
Q ss_pred CCccCCCCCCccccccccccCCccCccccccCCCC-chhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcCC
Q 035862 229 LAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLK-SQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADG 307 (393)
Q Consensus 229 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 307 (393)
+|..-..+. .-.+.||+|.|.|||++.|..|+ .++||||.|||||.||||+.||++.+-. .+...++.-.+
T Consensus 158 MAsLe~~gk---lLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir---~LLlKV~~G~f-- 229 (786)
T KOG0588|consen 158 MASLEVPGK---LLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIR---VLLLKVQRGVF-- 229 (786)
T ss_pred eeecccCCc---cccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHH---HHHHHHHcCcc--
Confidence 997643332 34567999999999999999885 5899999999999999999999854321 11111111111
Q ss_pred cccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhhcCCC
Q 035862 308 KKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQESEQGS 366 (393)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~~~~~~~~~ 366 (393)
+.+..++.++++||.+||..||..|.|+++|++|+|...-.....+
T Consensus 230 -------------~MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP~l~g~~~~~~~ 275 (786)
T KOG0588|consen 230 -------------EMPSNISSEAQDLLRRMLDVDPSTRITTEEILKHPFLSGYTSLPSS 275 (786)
T ss_pred -------------cCCCcCCHHHHHHHHHHhccCccccccHHHHhhCchhhcCCCCChh
Confidence 1234678999999999999999999999999999998876554444
No 34
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8e-45 Score=342.11 Aligned_cols=251 Identities=25% Similarity=0.422 Sum_probs=210.7
Q ss_pred HhcCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCc---ccHHHHHHHHHHhhcCC-CCccceeeeeeec
Q 035862 70 ATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL---QGHKQWLAEVQFLGVVS-HPNLVKLLGYCST 145 (393)
Q Consensus 70 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~ 145 (393)
..++|.++++||+|+||+|+++..+.+++ .+|||++++... ......+.|.+|+...+ ||.++.++..|.+
T Consensus 366 ~l~~F~~l~vLGkGsFGkV~lae~k~~~e-----~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT 440 (694)
T KOG0694|consen 366 TLDDFRLLAVLGRGSFGKVLLAELKGTNE-----YYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQT 440 (694)
T ss_pred cccceEEEEEeccCcCceEEEEEEcCCCc-----EEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeeccccccc
Confidence 45789999999999999999999765554 699999998643 34556788999988886 9999999999999
Q ss_pred CCcccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEe
Q 035862 146 EDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLS 225 (393)
Q Consensus 146 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~ 225 (393)
.+ ++|+||||+.||++..+ .....+++..+.-++..++.||.|||++ ||||||||.+|||+|.+|.+||+
T Consensus 441 ~~----~l~fvmey~~Ggdm~~~---~~~~~F~e~rarfyaAev~l~L~fLH~~---~IIYRDlKLdNiLLD~eGh~kiA 510 (694)
T KOG0694|consen 441 KE----HLFFVMEYVAGGDLMHH---IHTDVFSEPRARFYAAEVVLGLQFLHEN---GIIYRDLKLDNLLLDTEGHVKIA 510 (694)
T ss_pred CC----eEEEEEEecCCCcEEEE---EecccccHHHHHHHHHHHHHHHHHHHhc---CceeeecchhheEEcccCcEEec
Confidence 88 77999999999995443 3445699999999999999999999999 99999999999999999999999
Q ss_pred eccCCccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCc
Q 035862 226 DFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPA 305 (393)
Q Consensus 226 Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~ 305 (393)
|||+++.....+ ...++.+|||.|+|||++.+..|+..+|.|||||+|||||.|..||.+.++....+-+-
T Consensus 511 DFGlcKe~m~~g--~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~------- 581 (694)
T KOG0694|consen 511 DFGLCKEGMGQG--DRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIV------- 581 (694)
T ss_pred ccccccccCCCC--CccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHh-------
Confidence 999998754332 25678999999999999999999999999999999999999999999765543322111
Q ss_pred CCcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCH-----HHHHHHH
Q 035862 306 DGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTM-----NQVVESL 355 (393)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~-----~~~l~~l 355 (393)
.. ...||..++.+..++++++|.++|++|..+ .+|..|.
T Consensus 582 ---------~d--~~~yP~~ls~ea~~il~~ll~k~p~kRLG~~e~d~~~i~~hp 625 (694)
T KOG0694|consen 582 ---------ND--EVRYPRFLSKEAIAIMRRLLRKNPEKRLGSGERDAEDIKKHP 625 (694)
T ss_pred ---------cC--CCCCCCcccHHHHHHHHHHhccCcccccCCCCCCchhhhhCC
Confidence 00 123556788999999999999999999865 6666663
No 35
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=8.4e-45 Score=332.80 Aligned_cols=250 Identities=24% Similarity=0.330 Sum_probs=203.5
Q ss_pred cCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCc---ccHHHHHHHHHHhhcCCCCccceeeeeeecCCc
Q 035862 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL---QGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDE 148 (393)
Q Consensus 72 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 148 (393)
++|++.+.||+|+||.||+|.+..+ +..||+|.+..... .....+.+|+.+++.++||||+++++++.+.+
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~-----~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~- 74 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRIS-----EHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQR- 74 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCC-----CCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCC-
Confidence 4689999999999999999996543 34699999865321 23345778999999999999999998887665
Q ss_pred ccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeecc
Q 035862 149 RGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFG 228 (393)
Q Consensus 149 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg 228 (393)
..++||||+.+++|.+++.. ...+++..++.++.|++.||+|||++ |++||||||+|||++.+|.+||+|||
T Consensus 75 ---~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~NIli~~~~~~kl~Dfg 146 (291)
T cd05612 75 ---FLYMLMEYVPGGELFSYLRN--SGRFSNSTGLFYASEIVCALEYLHSK---EIVYRDLKPENILLDKEGHIKLTDFG 146 (291)
T ss_pred ---eEEEEEeCCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEEecC
Confidence 56999999999999999853 45689999999999999999999998 99999999999999999999999999
Q ss_pred CCccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcCCc
Q 035862 229 LAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGK 308 (393)
Q Consensus 229 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 308 (393)
++...... .....|++.|+|||++.+..++.++|||||||++|+|++|..||.......... ..... .
T Consensus 147 ~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~--~i~~~----~- 214 (291)
T cd05612 147 FAKKLRDR-----TWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYE--KILAG----K- 214 (291)
T ss_pred cchhccCC-----cccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH--HHHhC----C-
Confidence 98764322 123578999999999999999999999999999999999999997654322111 11100 0
Q ss_pred ccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCC-----HHHHHHHHHHH
Q 035862 309 KFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPT-----MNQVVESLKLA 358 (393)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps-----~~~~l~~l~~~ 358 (393)
...+...+..+.+|+.+||+.||.+||+ +.++++|.|..
T Consensus 215 -----------~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~ 258 (291)
T cd05612 215 -----------LEFPRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNHRWFK 258 (291)
T ss_pred -----------cCCCccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcCcccc
Confidence 0112233577899999999999999995 99999998864
No 36
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=1.5e-44 Score=342.05 Aligned_cols=265 Identities=28% Similarity=0.389 Sum_probs=208.8
Q ss_pred cCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCC-cccHHHHHHHHHHhhcC-CCCccceeeeeeecCCcc
Q 035862 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG-LQGHKQWLAEVQFLGVV-SHPNLVKLLGYCSTEDER 149 (393)
Q Consensus 72 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~ 149 (393)
++|++.+.||+|+||.||+|.+...+.......||+|.+.... ......+.+|+.+++.+ +|+||+++++.+...+
T Consensus 38 ~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~-- 115 (374)
T cd05106 38 DNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGG-- 115 (374)
T ss_pred HHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCC--
Confidence 4699999999999999999997665555566789999997543 23345678899999999 7999999999998776
Q ss_pred cceEEEEEeecCCCChHHHHhhcC--------------------------------------------------------
Q 035862 150 GIQRLLVYEYMPNRSLEDRLFSRA-------------------------------------------------------- 173 (393)
Q Consensus 150 ~~~~~lv~e~~~~~~L~~~l~~~~-------------------------------------------------------- 173 (393)
..++||||+.+|+|.+++....
T Consensus 116 --~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (374)
T cd05106 116 --PVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQ 193 (374)
T ss_pred --CeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccccccc
Confidence 4599999999999999885321
Q ss_pred ------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCCccCCCCCCccc
Q 035862 174 ------------QPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHV 241 (393)
Q Consensus 174 ------------~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 241 (393)
...+++..++.++.|++.||.|||++ ||+||||||+|||+++++.+||+|||++...........
T Consensus 194 ~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~---giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~ 270 (374)
T cd05106 194 SSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASK---NCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVV 270 (374)
T ss_pred cccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CEEeccCchheEEEeCCCeEEEeeceeeeeccCCcceee
Confidence 12467888999999999999999998 999999999999999999999999999976543322222
Q ss_pred cccccccCCccCccccccCCCCchhhHHHHHHHHHHHHh-CCCccCCCCchhhhHHHHHHhhcCcCCcccccccCccccc
Q 035862 242 STAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILT-GRRVLERNRPTMEQKLLEWVKQFPADGKKFSMMIDPRLRN 320 (393)
Q Consensus 242 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (393)
.....++..|+|||++.+..++.++|||||||++|+|++ |..||....... ......... ...
T Consensus 271 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~--~~~~~~~~~--------------~~~ 334 (374)
T cd05106 271 KGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNS--KFYKMVKRG--------------YQM 334 (374)
T ss_pred ccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccH--HHHHHHHcc--------------cCc
Confidence 223345668999999988899999999999999999997 999997643321 111111110 000
Q ss_pred ccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHH
Q 035862 321 QYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAV 359 (393)
Q Consensus 321 ~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~~ 359 (393)
..+...+.++.+++.+||+.||.+||++.++++.|..++
T Consensus 335 ~~~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~~ 373 (374)
T cd05106 335 SRPDFAPPEIYSIMKMCWNLEPTERPTFSQISQLIQRQL 373 (374)
T ss_pred cCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHh
Confidence 111123578999999999999999999999999998875
No 37
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=2.3e-44 Score=329.24 Aligned_cols=270 Identities=25% Similarity=0.360 Sum_probs=204.1
Q ss_pred cCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCC--cccHHHHHHHHHHhhcCCCCccceeeeeeecCCcc
Q 035862 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG--LQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDER 149 (393)
Q Consensus 72 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 149 (393)
++|++.+.||+|+||.||+|++..+ +..||+|++.... ......+.+|+.+++.++||||+++++++...+
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~-----~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-- 73 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKET-----KEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRG-- 73 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCC-----CcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCC--
Confidence 4799999999999999999997543 3469999887542 223456778999999999999999999987766
Q ss_pred cceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccC
Q 035862 150 GIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGL 229 (393)
Q Consensus 150 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~ 229 (393)
..++||||+.++.+..+. .....+++..++.++.|++.||.|||+. +++||||||+||+++.++.+||+|||+
T Consensus 74 --~~~lv~e~~~~~~l~~~~--~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nill~~~~~~kl~Dfg~ 146 (287)
T cd07848 74 --KLYLVFEYVEKNMLELLE--EMPNGVPPEKVRSYIYQLIKAIHWCHKN---DIVHRDIKPENLLISHNDVLKLCDFGF 146 (287)
T ss_pred --EEEEEEecCCCCHHHHHH--hcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEeeccC
Confidence 569999999887776544 2335689999999999999999999998 999999999999999999999999999
Q ss_pred CccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHH-HhhcCcC--
Q 035862 230 AREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEW-VKQFPAD-- 306 (393)
Q Consensus 230 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~-~~~~~~~-- 306 (393)
+......... ......|++.|+|||++.+..++.++|||||||++|+|++|++||.............. ....+..
T Consensus 147 ~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 225 (287)
T cd07848 147 ARNLSEGSNA-NYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQM 225 (287)
T ss_pred cccccccccc-cccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHH
Confidence 9865432211 22345789999999999988999999999999999999999999986544322111111 0000000
Q ss_pred -----CcccccccCc------ccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 035862 307 -----GKKFSMMIDP------RLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLK 356 (393)
Q Consensus 307 -----~~~~~~~~~~------~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~ 356 (393)
...+.....+ .........++.++.+|+.+||++||++|||++++++|.|
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~hp~ 286 (287)
T cd07848 226 KLFYSNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNHPA 286 (287)
T ss_pred HhhhccchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcCCC
Confidence 0000000000 0011112235678999999999999999999999999865
No 38
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=7e-44 Score=332.60 Aligned_cols=269 Identities=26% Similarity=0.377 Sum_probs=207.4
Q ss_pred hcCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCC-cccHHHHHHHHHHhhcCCCCccceeeeeeecCCcc
Q 035862 71 TNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG-LQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDER 149 (393)
Q Consensus 71 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 149 (393)
.++|++.+.||+|+||.||++.+..+ +..+|+|.+.... ......+.+|+++++.++||||+++++++...+
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~-----~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-- 76 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHKPS-----GLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDG-- 76 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEECCC-----CcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECC--
Confidence 36799999999999999999996543 3468999887542 233456889999999999999999999998766
Q ss_pred cceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccC
Q 035862 150 GIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGL 229 (393)
Q Consensus 150 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~ 229 (393)
..++||||+++++|.+++.. ...+++..+..++.|++.||.|||+. .+|+||||||+|||++.++.+||+|||+
T Consensus 77 --~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lH~~--~~ivH~dlkp~Nil~~~~~~~kl~Dfg~ 150 (331)
T cd06649 77 --EISICMEHMDGGSLDQVLKE--AKRIPEEILGKVSIAVLRGLAYLREK--HQIMHRDVKPSNILVNSRGEIKLCDFGV 150 (331)
T ss_pred --EEEEEeecCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHhhc--CCEEcCCCChhhEEEcCCCcEEEccCcc
Confidence 56999999999999999843 34689999999999999999999974 2699999999999999999999999999
Q ss_pred CccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcCCcc
Q 035862 230 AREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKK 309 (393)
Q Consensus 230 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 309 (393)
+...... ......|++.|+|||++.+..++.++|||||||++|+|++|+.||........... ......++..
T Consensus 151 ~~~~~~~----~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~---~~~~~~~~~~ 223 (331)
T cd06649 151 SGQLIDS----MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAI---FGRPVVDGEE 223 (331)
T ss_pred ccccccc----ccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH---hccccccccc
Confidence 8754322 12345789999999999999999999999999999999999999975443211111 1100000000
Q ss_pred --cc-------------------------------cccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 035862 310 --FS-------------------------------MMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLK 356 (393)
Q Consensus 310 --~~-------------------------------~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~ 356 (393)
.. .+............++.++.+|+.+||+.||++|||+.++++|.|
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~~ 303 (331)
T cd06649 224 GEPHSISPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHTF 303 (331)
T ss_pred CCccccCcccccccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcChH
Confidence 00 000000000011135678999999999999999999999999998
Q ss_pred HHH
Q 035862 357 LAV 359 (393)
Q Consensus 357 ~~~ 359 (393)
...
T Consensus 304 ~~~ 306 (331)
T cd06649 304 IKR 306 (331)
T ss_pred Hhh
Confidence 754
No 39
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=6.9e-45 Score=334.05 Aligned_cols=258 Identities=26% Similarity=0.400 Sum_probs=217.0
Q ss_pred hcCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCC--cccHHHHHHHHHHhhcCCCCccceeeeeeecCCc
Q 035862 71 TNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG--LQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDE 148 (393)
Q Consensus 71 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 148 (393)
.++|..++.+|+|+||.+++++.+..+ ..+++|.+.-.. ...+....+|+.+++++.|||||.+.+.|..++.
T Consensus 3 m~~Ye~~~~iG~GafG~a~lvrhk~~~-----~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~ 77 (426)
T KOG0589|consen 3 MDNYEVLRQVGRGAFGSALLVRHKSDD-----KLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQ 77 (426)
T ss_pred cchhhhhhhcCccccchhhhhhhccCC-----ceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCc
Confidence 357999999999999999998865433 468999886543 2334567899999999999999999999988774
Q ss_pred ccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeecc
Q 035862 149 RGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFG 228 (393)
Q Consensus 149 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg 228 (393)
++++||+||+||+|.+.|...+...++++.++.|+.|++.|+.|||++ .|+|||||+.|||++.++.|||+|||
T Consensus 78 ---~l~Ivm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~---~iLHRDlK~~Nifltk~~~VkLgDfG 151 (426)
T KOG0589|consen 78 ---LLCIVMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHEN---RVLHRDLKCANIFLTKDKKVKLGDFG 151 (426)
T ss_pred ---eEEEEEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhh---hhhcccchhhhhhccccCceeecchh
Confidence 479999999999999999877778899999999999999999999998 99999999999999999999999999
Q ss_pred CCccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcCCc
Q 035862 229 LAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGK 308 (393)
Q Consensus 229 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 308 (393)
+|+...... ....+.+||+.|+.||++.+.+|..|+|||||||++|||++-+++|...+...-. ....
T Consensus 152 laK~l~~~~--~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li--~ki~-------- 219 (426)
T KOG0589|consen 152 LAKILNPED--SLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSELI--LKIN-------- 219 (426)
T ss_pred hhhhcCCch--hhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchHHHH--HHHh--------
Confidence 999865543 2456789999999999999999999999999999999999999999866432211 1111
Q ss_pred ccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q 035862 309 KFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLA 358 (393)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~ 358 (393)
+......+...+.++..++..||..+|..||++.+++.++-..
T Consensus 220 -------~~~~~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~P~l~ 262 (426)
T KOG0589|consen 220 -------RGLYSPLPSMYSSELRSLVKSMLRKNPEHRPSALELLRRPHLL 262 (426)
T ss_pred -------hccCCCCCccccHHHHHHHHHHhhcCCccCCCHHHHhhChhhh
Confidence 1112334456789999999999999999999999999986444
No 40
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=4.6e-44 Score=327.48 Aligned_cols=269 Identities=24% Similarity=0.368 Sum_probs=202.2
Q ss_pred cCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCc-ccHHHHHHHHHHhhcCCCCccceeeeeeecCCccc
Q 035862 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL-QGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERG 150 (393)
Q Consensus 72 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 150 (393)
++|++.+.||.|+||.||+|....++ ..||+|.+..... .....+.+|+.+++.++||||+++++++...+
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--- 76 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTE-----NLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTER--- 76 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCC-----CEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCC---
Confidence 56999999999999999999865443 4699998865432 23346778999999999999999999987765
Q ss_pred ceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCC
Q 035862 151 IQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLA 230 (393)
Q Consensus 151 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a 230 (393)
..++||||+.+ +|.+++... ...+++..+..++.||+.||+|||++ ||+||||||+|||++.++.+||+|||++
T Consensus 77 -~~~lv~e~~~~-~l~~~l~~~-~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~DfG~~ 150 (288)
T cd07871 77 -CLTLVFEYLDS-DLKQYLDNC-GNLMSMHNVKIFMFQLLRGLSYCHKR---KILHRDLKPQNLLINEKGELKLADFGLA 150 (288)
T ss_pred -eEEEEEeCCCc-CHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEECcCcce
Confidence 56999999965 999888543 34578899999999999999999998 9999999999999999999999999998
Q ss_pred ccCCCCCCccccccccccCCccCcccccc-CCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcCC--
Q 035862 231 REGPTGDHTHVSTAVVGTYGYAAPEYIET-GHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADG-- 307 (393)
Q Consensus 231 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~-- 307 (393)
........ ......+++.|+|||++.+ ..++.++||||+||++|+|++|++||..................+...
T Consensus 151 ~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 228 (288)
T cd07871 151 RAKSVPTK--TYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETW 228 (288)
T ss_pred eeccCCCc--cccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHh
Confidence 75432221 2234578999999998865 568999999999999999999999997655433222111111111100
Q ss_pred ------cccccccCcccccc----cCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 035862 308 ------KKFSMMIDPRLRNQ----YSINAARRVAKLADNCLKKNPEERPTMNQVVESLK 356 (393)
Q Consensus 308 ------~~~~~~~~~~~~~~----~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~ 356 (393)
..+.....+..... .....+.++.+|+.+||++||.+|||++++++|.|
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~hp~ 287 (288)
T cd07871 229 PGITSNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRHSY 287 (288)
T ss_pred hccccchhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcCCC
Confidence 00000111110000 01124577899999999999999999999999865
No 41
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=2.4e-44 Score=340.93 Aligned_cols=264 Identities=27% Similarity=0.417 Sum_probs=206.0
Q ss_pred cCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCC-cccHHHHHHHHHHhhcC-CCCccceeeeeeecCCcc
Q 035862 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG-LQGHKQWLAEVQFLGVV-SHPNLVKLLGYCSTEDER 149 (393)
Q Consensus 72 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~ 149 (393)
++|++.+.||+|+||.||+|.+...........||+|++.... ......+.+|+.++..+ +||||+++++++...+
T Consensus 35 ~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~-- 112 (375)
T cd05104 35 NRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGG-- 112 (375)
T ss_pred HHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCC--
Confidence 4688999999999999999986544444566789999987543 23345678899999999 7999999999998776
Q ss_pred cceEEEEEeecCCCChHHHHhhcC--------------------------------------------------------
Q 035862 150 GIQRLLVYEYMPNRSLEDRLFSRA-------------------------------------------------------- 173 (393)
Q Consensus 150 ~~~~~lv~e~~~~~~L~~~l~~~~-------------------------------------------------------- 173 (393)
..++||||+++|+|.+++....
T Consensus 113 --~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (375)
T cd05104 113 --PTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVR 190 (375)
T ss_pred --cceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccc
Confidence 4499999999999999885422
Q ss_pred -----------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCCccCCCC
Q 035862 174 -----------------QPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTG 236 (393)
Q Consensus 174 -----------------~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~ 236 (393)
...+++..++.++.||+.||.|||+. +++||||||+|||++.++.+||+|||++......
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~ 267 (375)
T cd05104 191 SGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIRND 267 (375)
T ss_pred cceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCchhhEEEECCCcEEEecCccceeccCc
Confidence 12467888999999999999999998 9999999999999999999999999999765433
Q ss_pred CCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHh-CCCccCCCCchhhhHHHHHHhhcCcCCcccccccC
Q 035862 237 DHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILT-GRRVLERNRPTMEQKLLEWVKQFPADGKKFSMMID 315 (393)
Q Consensus 237 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (393)
..........++..|+|||++.+..++.++|||||||++|||++ |..||....... ........ +
T Consensus 268 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~--~~~~~~~~----~-------- 333 (375)
T cd05104 268 SNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDS--KFYKMIKE----G-------- 333 (375)
T ss_pred ccccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchH--HHHHHHHh----C--------
Confidence 22222223345667999999999999999999999999999998 888886543221 11111111 0
Q ss_pred cccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q 035862 316 PRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLA 358 (393)
Q Consensus 316 ~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~ 358 (393)
.....+...+.++.+|+.+||+.||++||++.++++.|+..
T Consensus 334 --~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~~ 374 (375)
T cd05104 334 --YRMLSPECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQQ 374 (375)
T ss_pred --ccCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHhh
Confidence 00011112356899999999999999999999999999864
No 42
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=2e-44 Score=339.07 Aligned_cols=269 Identities=23% Similarity=0.307 Sum_probs=213.1
Q ss_pred cCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcccHHHHHHHHHHhhcCC-C-----Cccceeeeeeec
Q 035862 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVS-H-----PNLVKLLGYCST 145 (393)
Q Consensus 72 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h-----~niv~~~~~~~~ 145 (393)
.+|.+++.||+|+||.|-+|++..+++ .||||+++... ....+...|+.+|..++ | -|+|+++++|..
T Consensus 186 ~rY~V~e~LGkGtFGQVvk~~d~~T~e-----~VAIKIiKN~k-~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~f 259 (586)
T KOG0667|consen 186 YRYEVLEVLGKGSFGQVVKAYDHKTGE-----IVAIKIIKNKK-RFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYF 259 (586)
T ss_pred EEEEEEEEecccccceeEEEEecCCCc-----EEEEEeeccCh-HHHHHHHHHHHHHHHHhccCCCCCeeEEEeeecccc
Confidence 378999999999999999999876654 59999998764 34556678999999998 4 389999999998
Q ss_pred CCcccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCC--ceE
Q 035862 146 EDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNF--KPK 223 (393)
Q Consensus 146 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~--~~k 223 (393)
.+ ++|||+|.+ ..+|.++|..+...+++...++.++.||+.||.+||.. +|||+||||+||||.+-+ .||
T Consensus 260 r~----HlciVfELL-~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l---~IIHcDLKPENILL~~~~r~~vK 331 (586)
T KOG0667|consen 260 RN----HLCIVFELL-STNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHEL---GIIHCDLKPENILLKDPKRSRIK 331 (586)
T ss_pred cc----ceeeeehhh-hhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCChhheeeccCCcCcee
Confidence 88 679999999 56999999988888999999999999999999999998 999999999999997554 699
Q ss_pred EeeccCCccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhc
Q 035862 224 LSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQF 303 (393)
Q Consensus 224 l~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~ 303 (393)
|+|||.|+...... ..++.+..|+|||++.|..|+.+.||||||||++||++|.+.|.+.++..+...+......
T Consensus 332 VIDFGSSc~~~q~v-----ytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~ 406 (586)
T KOG0667|consen 332 VIDFGSSCFESQRV-----YTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLGL 406 (586)
T ss_pred EEecccccccCCcc-----eeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhCC
Confidence 99999998754432 2678899999999999999999999999999999999999999887665443222211111
Q ss_pred CcCC-----ccccccc--------------------------------Cc--------ccccccCHHHHHHHHHHHHHhc
Q 035862 304 PADG-----KKFSMMI--------------------------------DP--------RLRNQYSINAARRVAKLADNCL 338 (393)
Q Consensus 304 ~~~~-----~~~~~~~--------------------------------~~--------~~~~~~~~~~~~~l~~li~~~l 338 (393)
|... ......+ +. .+...........+.+|+.+||
T Consensus 407 Pp~~mL~~~~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L 486 (586)
T KOG0667|consen 407 PPPKMLDTAKKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCL 486 (586)
T ss_pred CCHHHHHhccccceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHh
Confidence 1110 0000000 00 0000111123456799999999
Q ss_pred ccCCCCCCCHHHHHHHHHHHH
Q 035862 339 KKNPEERPTMNQVVESLKLAV 359 (393)
Q Consensus 339 ~~dp~~Rps~~~~l~~l~~~~ 359 (393)
.+||.+|+|..++++|.|.-.
T Consensus 487 ~~dP~~R~tp~qal~Hpfl~~ 507 (586)
T KOG0667|consen 487 EWDPAERITPAQALNHPFLTG 507 (586)
T ss_pred ccCchhcCCHHHHhcCccccc
Confidence 999999999999999998753
No 43
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=1.2e-44 Score=337.34 Aligned_cols=249 Identities=24% Similarity=0.347 Sum_probs=203.5
Q ss_pred cCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCC---cccHHHHHHHHHHhhcCCCCccceeeeeeecCCc
Q 035862 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG---LQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDE 148 (393)
Q Consensus 72 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 148 (393)
++|++.+.||+|+||.||+|.+..++ ..||+|.+.... ......+.+|+.+++.++||||+++++++...+
T Consensus 18 ~~y~~~~~lg~G~~g~V~~~~~~~~~-----~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~- 91 (329)
T PTZ00263 18 SDFEMGETLGTGSFGRVRIAKHKGTG-----EYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDEN- 91 (329)
T ss_pred hheEEEEEEEecCCeEEEEEEECCCC-----CEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCC-
Confidence 56999999999999999999975443 469999986532 123456788999999999999999999998776
Q ss_pred ccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeecc
Q 035862 149 RGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFG 228 (393)
Q Consensus 149 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg 228 (393)
..++||||+.+++|.+++.. ...+++..+..++.||+.||.|||++ +|+||||||+|||++.++.+||+|||
T Consensus 92 ---~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kl~Dfg 163 (329)
T PTZ00263 92 ---RVYFLLEFVVGGELFTHLRK--AGRFPNDVAKFYHAELVLAFEYLHSK---DIIYRDLKPENLLLDNKGHVKVTDFG 163 (329)
T ss_pred ---EEEEEEcCCCCChHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEECCCCCEEEeecc
Confidence 56999999999999999853 45688999999999999999999998 99999999999999999999999999
Q ss_pred CCccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcCCc
Q 035862 229 LAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGK 308 (393)
Q Consensus 229 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 308 (393)
++....... ....|++.|+|||++.+..++.++|||||||++|+|++|..||......... ..... ..
T Consensus 164 ~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~---~~i~~---~~- 231 (329)
T PTZ00263 164 FAKKVPDRT-----FTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIY---EKILA---GR- 231 (329)
T ss_pred CceEcCCCc-----ceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHHHH---HHHhc---CC-
Confidence 997653321 2357899999999999999999999999999999999999999765432111 11100 00
Q ss_pred ccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCC-----HHHHHHHHHH
Q 035862 309 KFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPT-----MNQVVESLKL 357 (393)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps-----~~~~l~~l~~ 357 (393)
...+..++..+.+|+.+||+.||.+||+ +.+++.|.|.
T Consensus 232 -----------~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~hp~f 274 (329)
T PTZ00263 232 -----------LKFPNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNHPYF 274 (329)
T ss_pred -----------cCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCcc
Confidence 0111124567899999999999999986 7999999764
No 44
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=6.1e-44 Score=333.41 Aligned_cols=268 Identities=28% Similarity=0.405 Sum_probs=211.0
Q ss_pred cCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCc-ccHHHHHHHHHHhhcC-CCCccceeeeeeecCCcc
Q 035862 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL-QGHKQWLAEVQFLGVV-SHPNLVKLLGYCSTEDER 149 (393)
Q Consensus 72 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~ 149 (393)
++|++.+.||+|+||.||+|.............||+|++..... .....+.+|+.++..+ +|+||+++++++...+.
T Consensus 7 ~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~- 85 (337)
T cd05054 7 DRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGG- 85 (337)
T ss_pred HHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCC-
Confidence 47999999999999999999876555555667899999875422 2345677899999999 79999999998875543
Q ss_pred cceEEEEEeecCCCChHHHHhhcCC-------------------------------------------------------
Q 035862 150 GIQRLLVYEYMPNRSLEDRLFSRAQ------------------------------------------------------- 174 (393)
Q Consensus 150 ~~~~~lv~e~~~~~~L~~~l~~~~~------------------------------------------------------- 174 (393)
..+++|||+.+++|.+++.....
T Consensus 86 --~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (337)
T cd05054 86 --PLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGD 163 (337)
T ss_pred --CEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhh
Confidence 46899999999999999854221
Q ss_pred ----CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCCccCCCCCCccccccccccCC
Q 035862 175 ----PTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYG 250 (393)
Q Consensus 175 ----~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~ 250 (393)
..+++..+..++.|++.||.|||++ +|+||||||+|||+++++.++|+|||++................++..
T Consensus 164 ~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~ 240 (337)
T cd05054 164 ELYKEPLTLEDLISYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLK 240 (337)
T ss_pred HHhhcCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCcc
Confidence 2578899999999999999999998 999999999999999999999999999986543332222334456778
Q ss_pred ccCccccccCCCCchhhHHHHHHHHHHHHh-CCCccCCCCchhhhHHHHHHhhcCcCCcccccccCcccccccCHHHHHH
Q 035862 251 YAAPEYIETGHLKSQSDIWSFGVVLYEILT-GRRVLERNRPTMEQKLLEWVKQFPADGKKFSMMIDPRLRNQYSINAARR 329 (393)
Q Consensus 251 y~aPE~~~~~~~~~~~DiwslGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (393)
|+|||++.+..++.++|||||||++|||++ |..||....... .+...... ......+...+.+
T Consensus 241 y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~--~~~~~~~~--------------~~~~~~~~~~~~~ 304 (337)
T cd05054 241 WMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDE--EFCRRLKE--------------GTRMRAPEYATPE 304 (337)
T ss_pred ccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccH--HHHHHHhc--------------cCCCCCCccCCHH
Confidence 999999999999999999999999999998 999997543221 11111110 0001111234577
Q ss_pred HHHHHHHhcccCCCCCCCHHHHHHHHHHHHhh
Q 035862 330 VAKLADNCLKKNPEERPTMNQVVESLKLAVQE 361 (393)
Q Consensus 330 l~~li~~~l~~dp~~Rps~~~~l~~l~~~~~~ 361 (393)
+.+++.+||+.+|++||++.+++++|..+++.
T Consensus 305 ~~~l~~~cl~~~p~~RPs~~ell~~l~~~~~~ 336 (337)
T cd05054 305 IYSIMLDCWHNNPEDRPTFSELVEILGDLLQE 336 (337)
T ss_pred HHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 99999999999999999999999999998864
No 45
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=2.7e-43 Score=324.96 Aligned_cols=268 Identities=29% Similarity=0.465 Sum_probs=203.6
Q ss_pred cCCcccceecccCCceEEEEEEcCCC-----------CCCCceEEEEEEecCCCc-ccHHHHHHHHHHhhcCCCCcccee
Q 035862 72 NGFNRMLKIGEGGFGSVYKGTIRPLD-----------GRGEPLVVAVKKLNNHGL-QGHKQWLAEVQFLGVVSHPNLVKL 139 (393)
Q Consensus 72 ~~y~~~~~lg~G~~g~Vy~~~~~~~~-----------~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~ 139 (393)
++|.+.++||+|+||.||+|.+.... ..+....||+|.+..... .....+.+|+.++..++||||+++
T Consensus 5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~ 84 (304)
T cd05096 5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRL 84 (304)
T ss_pred hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEE
Confidence 57999999999999999999865332 233556799999876432 234568899999999999999999
Q ss_pred eeeeecCCcccceEEEEEeecCCCChHHHHhhcC-----------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCC
Q 035862 140 LGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRA-----------------QPTLPWKTRLEIILGAAEGLAYLHEGLEI 202 (393)
Q Consensus 140 ~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-----------------~~~~~~~~~~~i~~ql~~~l~~LH~~~~~ 202 (393)
++++...+ ..++||||+.+++|.+++.... ...+++..++.++.||+.||.|||+.
T Consensus 85 ~~~~~~~~----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~--- 157 (304)
T cd05096 85 LGVCVDED----PLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSL--- 157 (304)
T ss_pred EEEEecCC----ceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHC---
Confidence 99998766 4599999999999999885422 12467788999999999999999998
Q ss_pred CeEeccCCCCCeEeCCCCceEEeeccCCccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHh--
Q 035862 203 QVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILT-- 280 (393)
Q Consensus 203 ~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ellt-- 280 (393)
+|+||||||+|||++.++.+||+|||++................++..|+|||++.+..++.++||||||+++|+|++
T Consensus 158 ~ivH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~ 237 (304)
T cd05096 158 NFVHRDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLC 237 (304)
T ss_pred CccccCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHcc
Confidence 999999999999999999999999999976544333223334456788999999988899999999999999999997
Q ss_pred CCCccCCCCchhhhHHHHHHhhcCcCCcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 035862 281 GRRVLERNRPTMEQKLLEWVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLK 356 (393)
Q Consensus 281 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~ 356 (393)
+..||....... .............. ......+..++..+.+|+.+||+.||++|||+.++.+.|.
T Consensus 238 ~~~p~~~~~~~~---~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~ 303 (304)
T cd05096 238 KEQPYGELTDEQ---VIENAGEFFRDQGR-------QVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLT 303 (304)
T ss_pred CCCCCCcCCHHH---HHHHHHHHhhhccc-------cccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHh
Confidence 456665433221 11111110000000 0000011234578999999999999999999999988774
No 46
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=3.6e-44 Score=334.97 Aligned_cols=257 Identities=24% Similarity=0.351 Sum_probs=206.3
Q ss_pred cCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCC---cccHHHHHHHHHHhhcCCCCccceeeeeeecCCc
Q 035862 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG---LQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDE 148 (393)
Q Consensus 72 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 148 (393)
++|++.+.||+|+||.||+|.+..++ ..||+|++.... ......+.+|+.++..++||||+++++++...+
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~- 74 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTG-----EIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDE- 74 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCC-----CEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCC-
Confidence 46999999999999999999976443 369999987542 123456778999999999999999999988766
Q ss_pred ccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeecc
Q 035862 149 RGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFG 228 (393)
Q Consensus 149 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg 228 (393)
..++||||+++++|.+++. ....+++..++.++.|++.||.|||+. +|+||||||+|||++.++.+||+|||
T Consensus 75 ---~~~lv~e~~~g~~L~~~l~--~~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kL~Dfg 146 (333)
T cd05600 75 ---YLYLAMEYVPGGDFRTLLN--NLGVLSEDHARFYMAEMFEAVDALHEL---GYIHRDLKPENFLIDASGHIKLTDFG 146 (333)
T ss_pred ---EEEEEEeCCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEEEeCc
Confidence 5699999999999999984 345688999999999999999999998 99999999999999999999999999
Q ss_pred CCccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHH-HHHHhhcCcCC
Q 035862 229 LAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKL-LEWVKQFPADG 307 (393)
Q Consensus 229 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~-~~~~~~~~~~~ 307 (393)
++..... ......|++.|+|||++.+..++.++|||||||++|||++|..||........... ..+....
T Consensus 147 ~a~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~---- 217 (333)
T cd05600 147 LSKGIVT-----YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETL---- 217 (333)
T ss_pred CCccccc-----ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhccccc----
Confidence 9976433 22446799999999999999999999999999999999999999976544322111 1111000
Q ss_pred cccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q 035862 308 KKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLA 358 (393)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~ 358 (393)
...........++.++.+|+.+||..+|.+||++.++++|.|..
T Consensus 218 -------~~~~~~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h~~~~ 261 (333)
T cd05600 218 -------QRPVYDDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNHPFFK 261 (333)
T ss_pred -------cCCCCCccccccCHHHHHHHHHHhhChhhhcCCHHHHHhCcccC
Confidence 00000000123568899999999999999999999999997643
No 47
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=2.2e-43 Score=322.11 Aligned_cols=262 Identities=29% Similarity=0.506 Sum_probs=210.7
Q ss_pred cCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCc-ccHHHHHHHHHHhhcCCCCccceeeeeeecCCccc
Q 035862 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL-QGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERG 150 (393)
Q Consensus 72 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 150 (393)
++|++.+.||+|+||.||+|.+...........|++|.+..... .....+.+|+.++..++||||+++++++....
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~--- 81 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQ--- 81 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCC---
Confidence 46889999999999999999876554444557799999875432 23456789999999999999999999987665
Q ss_pred ceEEEEEeecCCCChHHHHhhcCC--------------CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEe
Q 035862 151 IQRLLVYEYMPNRSLEDRLFSRAQ--------------PTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLL 216 (393)
Q Consensus 151 ~~~~lv~e~~~~~~L~~~l~~~~~--------------~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll 216 (393)
..+++|||+++++|.+++..... ..+++..++.++.|++.||.|||+. +++|+||||+||++
T Consensus 82 -~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nil~ 157 (283)
T cd05048 82 -PTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSH---HFVHRDLAARNCLV 157 (283)
T ss_pred -ceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccccceEEE
Confidence 45999999999999999864321 4578889999999999999999998 99999999999999
Q ss_pred CCCCceEEeeccCCccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHh-CCCccCCCCchhhhH
Q 035862 217 DGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILT-GRRVLERNRPTMEQK 295 (393)
Q Consensus 217 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ellt-g~~pf~~~~~~~~~~ 295 (393)
++++.++|+|||++................+++.|+|||.+.+..++.++|||||||++|||++ |..||.......
T Consensus 158 ~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~--- 234 (283)
T cd05048 158 GEGLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQE--- 234 (283)
T ss_pred cCCCcEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHH---
Confidence 9999999999999976543333223344567889999999988899999999999999999998 999997654321
Q ss_pred HHHHHhhcCcCCcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 035862 296 LLEWVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKL 357 (393)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~ 357 (393)
....... ......+..++.++.+|+.+||+.||.+||++.+++++|..
T Consensus 235 ~~~~i~~--------------~~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05048 235 VIEMIRS--------------RQLLPCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRS 282 (283)
T ss_pred HHHHHHc--------------CCcCCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhc
Confidence 2221111 01111233567889999999999999999999999999864
No 48
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-44 Score=300.69 Aligned_cols=268 Identities=25% Similarity=0.344 Sum_probs=212.9
Q ss_pred hcCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcccHHHHHHHHHHhhcCCCCccceeeeeeecCCc-c
Q 035862 71 TNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDE-R 149 (393)
Q Consensus 71 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-~ 149 (393)
.++|++.+.||+|||+.||++....++ ..||+|++.-......+..++|++..+.++|||+++++++...+.. .
T Consensus 20 ~~Ryri~~~LgeGGfsfv~LV~~~s~~-----~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~ 94 (302)
T KOG2345|consen 20 NKRYRIQRLLGEGGFSFVDLVKGLSTG-----HLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDG 94 (302)
T ss_pred CceEEEeeeecCCCceeeeeecccCcc-----cchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccC
Confidence 468999999999999999999854444 4699999987776778889999999999999999999988755443 3
Q ss_pred cceEEEEEeecCCCChHHHHhhc--CCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeec
Q 035862 150 GIQRLLVYEYMPNRSLEDRLFSR--AQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDF 227 (393)
Q Consensus 150 ~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Df 227 (393)
....|++++|...|+|.+.+... ++..+++.+++.|+.++++||.+||.. ...+.||||||.|||+++++.++|.||
T Consensus 95 ~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~-~~~yAH~DiKP~NILls~~~~~vl~D~ 173 (302)
T KOG2345|consen 95 KHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEK-EPPYAHRDIKPANILLSDSGLPVLMDL 173 (302)
T ss_pred ceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhcc-CCcccccCCCcceeEecCCCceEEEec
Confidence 34679999999999999998643 345689999999999999999999997 224999999999999999999999999
Q ss_pred cCCccCCCCCCcc-------ccccccccCCccCccccc---cCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHH
Q 035862 228 GLAREGPTGDHTH-------VSTAVVGTYGYAAPEYIE---TGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLL 297 (393)
Q Consensus 228 g~a~~~~~~~~~~-------~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~ 297 (393)
|.+......-... .-....+|..|+|||++. +...+.++|||||||++|.|+.|..||+..-.
T Consensus 174 GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~------- 246 (302)
T KOG2345|consen 174 GSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQ------- 246 (302)
T ss_pred cCccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhh-------
Confidence 9997654322111 112456789999999985 45678999999999999999999999973211
Q ss_pred HHHhhcCcCCcccccc-cCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHH
Q 035862 298 EWVKQFPADGKKFSMM-IDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAV 359 (393)
Q Consensus 298 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~~ 359 (393)
.|..+... .+..+.-+....+++.+.++++.||+.||.+||++.+++.++..+.
T Consensus 247 --------~GgSlaLAv~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~Li 301 (302)
T KOG2345|consen 247 --------QGGSLALAVQNAQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDLI 301 (302)
T ss_pred --------cCCeEEEeeeccccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhhc
Confidence 12222211 1222222222237899999999999999999999999999998764
No 49
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=2.5e-44 Score=334.45 Aligned_cols=246 Identities=26% Similarity=0.349 Sum_probs=198.3
Q ss_pred ceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCC---cccHHHHHHHHHHhhcCCCCccceeeeeeecCCcccceEE
Q 035862 78 LKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG---LQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQRL 154 (393)
Q Consensus 78 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 154 (393)
+.||+|+||.||+|.+..+ +..||+|++.... ......+.+|+.+++.++||||+++++++...+ ..+
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~-----~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~----~~~ 71 (323)
T cd05571 1 KLLGKGTFGKVILVREKAT-----GKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHD----RLC 71 (323)
T ss_pred CeeeeCCCeEEEEEEECCC-----CCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCC----EEE
Confidence 3699999999999986543 3469999987532 223345678999999999999999999988776 569
Q ss_pred EEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCCccCC
Q 035862 155 LVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGP 234 (393)
Q Consensus 155 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~ 234 (393)
+||||+.+++|.+++. ....+++..+..++.||+.||+|||+. ||+||||||+|||++.++.+||+|||++....
T Consensus 72 lv~e~~~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~~L~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~ 146 (323)
T cd05571 72 FVMEYANGGELFFHLS--RERVFSEDRARFYGAEIVSALGYLHSC---DVVYRDLKLENLMLDKDGHIKITDFGLCKEGI 146 (323)
T ss_pred EEEeCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEeeCCCCcccc
Confidence 9999999999999884 345689999999999999999999998 99999999999999999999999999987532
Q ss_pred CCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcCCccccccc
Q 035862 235 TGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKFSMMI 314 (393)
Q Consensus 235 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (393)
.... .....+||+.|+|||++.+..++.++|||||||++|||++|..||.......... .... ..
T Consensus 147 ~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~---~~~~---~~------- 211 (323)
T cd05571 147 SDGA--TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFE---LILM---EE------- 211 (323)
T ss_pred cCCC--cccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHHHHH---HHHc---CC-------
Confidence 2211 2234679999999999999999999999999999999999999997654321111 1100 00
Q ss_pred CcccccccCHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHHHHH
Q 035862 315 DPRLRNQYSINAARRVAKLADNCLKKNPEERP-----TMNQVVESLKL 357 (393)
Q Consensus 315 ~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rp-----s~~~~l~~l~~ 357 (393)
...+..++.++.+|+.+||+.||++|| ++.++++|.|.
T Consensus 212 -----~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h~~f 254 (323)
T cd05571 212 -----IRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEHRFF 254 (323)
T ss_pred -----CCCCCCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHcCCCc
Confidence 011223567899999999999999999 89999998664
No 50
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=6.5e-44 Score=345.71 Aligned_cols=266 Identities=25% Similarity=0.321 Sum_probs=214.7
Q ss_pred hcCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcccHHHHHHHHHHhhcCC-CCccceeee-eeecC-C
Q 035862 71 TNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVS-HPNLVKLLG-YCSTE-D 147 (393)
Q Consensus 71 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~-~~~~~-~ 147 (393)
..++++.+.|.+|||+.||+|.+...+ ..||+|++--......+.+.+|+++|+.|+ |+|||.+++ ..... .
T Consensus 36 ~~~v~V~~vLAEGGFa~VYla~~~~~~-----~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~ 110 (738)
T KOG1989|consen 36 SHRVTVEKVLAEGGFAQVYLAQDVKGG-----KKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSS 110 (738)
T ss_pred CEEEEEEEEEccCCcEEEEEEEecCCC-----ceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccC
Confidence 346888899999999999999976543 459999987766677788899999999998 999999999 33222 1
Q ss_pred cc-cceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEee
Q 035862 148 ER-GIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSD 226 (393)
Q Consensus 148 ~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~D 226 (393)
.. ....+|+||||.||.|-+++..+....|++.++++|++|+++|+++||.. ..+|||||||-+||||+.+|+.||||
T Consensus 111 ~~~~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~-~pPiIHRDLKiENvLls~~g~~KLCD 189 (738)
T KOG1989|consen 111 NNGVWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYL-KPPIIHRDLKIENVLLSADGNYKLCD 189 (738)
T ss_pred CCceeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcC-CCccchhhhhhhheEEcCCCCEEeCc
Confidence 22 24567889999999999999877777899999999999999999999996 44699999999999999999999999
Q ss_pred ccCCccCCCCCCcc-------ccccccccCCccCcccc---ccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHH
Q 035862 227 FGLAREGPTGDHTH-------VSTAVVGTYGYAAPEYI---ETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKL 296 (393)
Q Consensus 227 fg~a~~~~~~~~~~-------~~~~~~gt~~y~aPE~~---~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~ 296 (393)
||.+.-........ ..-...-|+.|+|||++ .+...+.|+|||+|||+||-||....||+.....
T Consensus 190 FGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~l----- 264 (738)
T KOG1989|consen 190 FGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKL----- 264 (738)
T ss_pred ccccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcce-----
Confidence 99986432221110 01123568999999977 5678999999999999999999999999854221
Q ss_pred HHHHhhcCcCCcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhh
Q 035862 297 LEWVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQES 362 (393)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~~~~~ 362 (393)
.+++..+.-+....++..+.+||..||+.||++||++-+++.++..+....
T Consensus 265 ---------------aIlng~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~~~ 315 (738)
T KOG1989|consen 265 ---------------AILNGNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELANKP 315 (738)
T ss_pred ---------------eEEeccccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhcCC
Confidence 123333332233468899999999999999999999999999999887544
No 51
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=7.7e-44 Score=317.14 Aligned_cols=258 Identities=26% Similarity=0.364 Sum_probs=212.4
Q ss_pred hcCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCccc---HHHHHHHHHHhhcCCCCccceeeeeeecCC
Q 035862 71 TNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQG---HKQWLAEVQFLGVVSHPNLVKLLGYCSTED 147 (393)
Q Consensus 71 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 147 (393)
.+.|+.++.||+|.-|+||++..+.+. ..+|+|++.+..... ..++..|-+||+.+.||.+..+|+.|..+.
T Consensus 76 l~~f~llk~LG~GdiG~VyL~~l~~t~-----~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~ 150 (459)
T KOG0610|consen 76 LRHFRLLKRLGCGDIGTVYLVELRGTN-----CLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDK 150 (459)
T ss_pred HHHHHHHHHcCCCCceeEEEEEecCCC-----ceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccc
Confidence 356888899999999999999976544 579999998875443 345667999999999999999999999887
Q ss_pred cccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeec
Q 035862 148 ERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDF 227 (393)
Q Consensus 148 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Df 227 (393)
+.|++||||.||+|..+++.+....+++..++.++..++.||+|||-. |||+|||||+||||-++|+|-|+||
T Consensus 151 ----~~cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHml---GivYRDLKPENILvredGHIMLsDF 223 (459)
T KOG0610|consen 151 ----YSCLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHML---GIVYRDLKPENILVREDGHIMLSDF 223 (459)
T ss_pred ----eeEEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhh---ceeeccCCcceeEEecCCcEEeeec
Confidence 669999999999999999888889999999999999999999999998 9999999999999999999999999
Q ss_pred cCCccCCC---------------------------------CCC---------------------ccccccccccCCccC
Q 035862 228 GLAREGPT---------------------------------GDH---------------------THVSTAVVGTYGYAA 253 (393)
Q Consensus 228 g~a~~~~~---------------------------------~~~---------------------~~~~~~~~gt~~y~a 253 (393)
.++..... ... .......+||-.|+|
T Consensus 224 DLS~~~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlA 303 (459)
T KOG0610|consen 224 DLSLRCPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLA 303 (459)
T ss_pred cccccCCCCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCcccccccccccccc
Confidence 98753211 000 002235799999999
Q ss_pred ccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcCCcccccccCcccccccCHHHHHHHHHH
Q 035862 254 PEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKL 333 (393)
Q Consensus 254 PE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 333 (393)
||++.|...+.++|+|+|||++|||+.|..||.+..... .+...+.+ .+.-.-...++..+.+|
T Consensus 304 PEvI~G~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~--Tl~NIv~~--------------~l~Fp~~~~vs~~akDL 367 (459)
T KOG0610|consen 304 PEVIRGEGHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKE--TLRNIVGQ--------------PLKFPEEPEVSSAAKDL 367 (459)
T ss_pred ceeeecCCCCchhhHHHHHHHHHHHHhCCCCcCCCCchh--hHHHHhcC--------------CCcCCCCCcchhHHHHH
Confidence 999999999999999999999999999999997654322 22222211 11111112567889999
Q ss_pred HHHhcccCCCCCCC----HHHHHHHHH
Q 035862 334 ADNCLKKNPEERPT----MNQVVESLK 356 (393)
Q Consensus 334 i~~~l~~dp~~Rps----~~~~l~~l~ 356 (393)
|+++|.+||.+|.. +.||-+|..
T Consensus 368 Ir~LLvKdP~kRlg~~rGA~eIK~HpF 394 (459)
T KOG0610|consen 368 IRKLLVKDPSKRLGSKRGAAEIKRHPF 394 (459)
T ss_pred HHHHhccChhhhhccccchHHhhcCcc
Confidence 99999999999998 999998853
No 52
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=3.2e-44 Score=335.42 Aligned_cols=251 Identities=25% Similarity=0.334 Sum_probs=204.0
Q ss_pred hcCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCC---cccHHHHHHHHHHhhcCCCCccceeeeeeecCC
Q 035862 71 TNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG---LQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTED 147 (393)
Q Consensus 71 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 147 (393)
.++|.+.+.||+|+||.||+|.+.... ...||+|.+.... ......+.+|+.+++.++||||+++++++...+
T Consensus 29 ~~~y~~~~~ig~G~~g~Vy~a~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~ 104 (340)
T PTZ00426 29 YEDFNFIRTLGTGSFGRVILATYKNED----FPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDES 104 (340)
T ss_pred hhhcEEEEEEeecCCeEEEEEEEECCC----CeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCC
Confidence 356999999999999999999865322 2469999886432 223456778999999999999999999998776
Q ss_pred cccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeec
Q 035862 148 ERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDF 227 (393)
Q Consensus 148 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Df 227 (393)
..++||||+.+|+|.+++.. ...+++..+..++.|++.||.|||+. ||+||||||+|||++.++.+||+||
T Consensus 105 ----~~~lv~Ey~~~g~L~~~i~~--~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~ikL~DF 175 (340)
T PTZ00426 105 ----YLYLVLEFVIGGEFFTFLRR--NKRFPNDVGCFYAAQIVLIFEYLQSL---NIVYRDLKPENLLLDKDGFIKMTDF 175 (340)
T ss_pred ----EEEEEEeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEecC
Confidence 56999999999999999853 45689999999999999999999998 9999999999999999999999999
Q ss_pred cCCccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcCC
Q 035862 228 GLAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADG 307 (393)
Q Consensus 228 g~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 307 (393)
|++...... .....||+.|+|||++.+..++.++|||||||++|||++|..||....+...... .....
T Consensus 176 G~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~--i~~~~---- 244 (340)
T PTZ00426 176 GFAKVVDTR-----TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQK--ILEGI---- 244 (340)
T ss_pred CCCeecCCC-----cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHHHHHH--HhcCC----
Confidence 999764321 2345799999999999998899999999999999999999999986544321111 11000
Q ss_pred cccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHHHHH
Q 035862 308 KKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERP-----TMNQVVESLKL 357 (393)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rp-----s~~~~l~~l~~ 357 (393)
...+...+..+.+++++||+.||.+|+ +++++++|.|.
T Consensus 245 ------------~~~p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~hp~f 287 (340)
T PTZ00426 245 ------------IYFPKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEHPWF 287 (340)
T ss_pred ------------CCCCCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcCCCc
Confidence 011223456789999999999999995 89999999764
No 53
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=1.3e-43 Score=323.34 Aligned_cols=251 Identities=20% Similarity=0.293 Sum_probs=199.2
Q ss_pred ceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCccc---HHHHHHHHHHhhcCCCCccceeeeeeecCCcccceEE
Q 035862 78 LKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQG---HKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQRL 154 (393)
Q Consensus 78 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 154 (393)
..||+|++|.||+|.+. +..||+|.+....... .+.+.+|+.+|+.++||||+++++++..........+
T Consensus 26 ~~i~~g~~~~v~~~~~~-------~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~ 98 (283)
T PHA02988 26 VLIKENDQNSIYKGIFN-------NKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLS 98 (283)
T ss_pred eEEeeCCceEEEEEEEC-------CEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceE
Confidence 57999999999999863 2359999987653322 4567799999999999999999999876222223568
Q ss_pred EEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCCccCC
Q 035862 155 LVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGP 234 (393)
Q Consensus 155 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~ 234 (393)
+||||+.+|+|.+++.. ...+++.....++.|++.||.|||+. .+++||||||+|||+++++.+||+|||++....
T Consensus 99 lv~Ey~~~g~L~~~l~~--~~~~~~~~~~~i~~~i~~~l~~lH~~--~~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~ 174 (283)
T PHA02988 99 LILEYCTRGYLREVLDK--EKDLSFKTKLDMAIDCCKGLYNLYKY--TNKPYKNLTSVSFLVTENYKLKIICHGLEKILS 174 (283)
T ss_pred EEEEeCCCCcHHHHHhh--CCCCChhHHHHHHHHHHHHHHHHHhc--CCCCCCcCChhhEEECCCCcEEEcccchHhhhc
Confidence 99999999999999954 45688999999999999999999973 278899999999999999999999999987543
Q ss_pred CCCCccccccccccCCccCcccccc--CCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcCCccccc
Q 035862 235 TGDHTHVSTAVVGTYGYAAPEYIET--GHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKFSM 312 (393)
Q Consensus 235 ~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (393)
... ....|+..|+|||++.+ ..++.++|||||||++|||++|..||......... ......
T Consensus 175 ~~~-----~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~--~~i~~~---------- 237 (283)
T PHA02988 175 SPP-----FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIY--DLIINK---------- 237 (283)
T ss_pred ccc-----ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHH--HHHHhc----------
Confidence 321 23468899999999976 68999999999999999999999999865432111 111100
Q ss_pred ccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHh
Q 035862 313 MIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQ 360 (393)
Q Consensus 313 ~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~~~ 360 (393)
..+...+..++..+.+|+.+||+.||++|||+.++++.|.+...
T Consensus 238 ----~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~~~ 281 (283)
T PHA02988 238 ----NNSLKLPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLYKF 281 (283)
T ss_pred ----CCCCCCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHHh
Confidence 00111122356789999999999999999999999999988653
No 54
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=4.6e-45 Score=335.57 Aligned_cols=246 Identities=27% Similarity=0.448 Sum_probs=206.5
Q ss_pred cCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcccHHHHHHHHHHhhcCCCCccceeeeeeecCCcccc
Q 035862 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGI 151 (393)
Q Consensus 72 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 151 (393)
+....++-||.|+.|.||+|+.... .||||+++.-. ..+++-|++++||||+.|.|+|....
T Consensus 124 e~IsELeWlGSGaQGAVF~Grl~ne-------tVAVKKV~elk-------ETdIKHLRkLkH~NII~FkGVCtqsP---- 185 (904)
T KOG4721|consen 124 EEISELEWLGSGAQGAVFLGRLHNE-------TVAVKKVRELK-------ETDIKHLRKLKHPNIITFKGVCTQSP---- 185 (904)
T ss_pred HHhhhhhhhccCcccceeeeeccCc-------eehhHHHhhhh-------hhhHHHHHhccCcceeeEeeeecCCc----
Confidence 3344456799999999999987533 39999885432 14788999999999999999998776
Q ss_pred eEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCCc
Q 035862 152 QRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAR 231 (393)
Q Consensus 152 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~ 231 (393)
..|||||||..|.|.+.| +....+.......|..+|+.|+.|||.+ .|||||||.-||||+.+..|||+|||-++
T Consensus 186 cyCIiMEfCa~GqL~~VL--ka~~~itp~llv~Wsk~IA~GM~YLH~h---KIIHRDLKSPNiLIs~~d~VKIsDFGTS~ 260 (904)
T KOG4721|consen 186 CYCIIMEFCAQGQLYEVL--KAGRPITPSLLVDWSKGIAGGMNYLHLH---KIIHRDLKSPNILISYDDVVKISDFGTSK 260 (904)
T ss_pred eeEEeeeccccccHHHHH--hccCccCHHHHHHHHHHhhhhhHHHHHh---hHhhhccCCCceEeeccceEEeccccchH
Confidence 559999999999999999 5566788889999999999999999999 99999999999999999999999999998
Q ss_pred cCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcCCcccc
Q 035862 232 EGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKFS 311 (393)
Q Consensus 232 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (393)
...... ..-.++||..|||||++.+.+.+.|+|||||||+|||||||..||.+-.... .+.
T Consensus 261 e~~~~S---TkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssA----------------IIw 321 (904)
T KOG4721|consen 261 ELSDKS---TKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSA----------------IIW 321 (904)
T ss_pred hhhhhh---hhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchhe----------------eEE
Confidence 755442 3346799999999999999999999999999999999999999997543221 111
Q ss_pred cccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHH
Q 035862 312 MMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAV 359 (393)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~~ 359 (393)
.+-...+....+..+++.+.-|++.||+-.|.+||++.+++.||+..-
T Consensus 322 GVGsNsL~LpvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~HldIa~ 369 (904)
T KOG4721|consen 322 GVGSNSLHLPVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHLDIAS 369 (904)
T ss_pred eccCCcccccCcccCchHHHHHHHHHHhcCCCCCccHHHHHHHHhhcC
Confidence 222334555667788899999999999999999999999999987543
No 55
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=2.3e-43 Score=323.12 Aligned_cols=273 Identities=25% Similarity=0.392 Sum_probs=201.6
Q ss_pred cCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCc--ccHHHHHHHHHHhhcC---CCCccceeeeeeecC
Q 035862 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL--QGHKQWLAEVQFLGVV---SHPNLVKLLGYCSTE 146 (393)
Q Consensus 72 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l---~h~niv~~~~~~~~~ 146 (393)
++|++.+.||+|+||.||+|.+... .+..||+|.+..... .....+.+|+.+++.+ +||||+++++++...
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~ 76 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKN----GGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVS 76 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCC----CCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecc
Confidence 3699999999999999999986422 235689998864322 2233455677766655 699999999988643
Q ss_pred Cc-ccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEe
Q 035862 147 DE-RGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLS 225 (393)
Q Consensus 147 ~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~ 225 (393)
.. ....+++||||+. ++|.+++.......+++..++.++.|++.||.|||+. +|+||||||+|||++.++.+||+
T Consensus 77 ~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~---~iiH~dlkp~Nil~~~~~~~kl~ 152 (290)
T cd07862 77 RTDRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLA 152 (290)
T ss_pred cCCCCCcEEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEcCCCCEEEc
Confidence 21 2235799999995 5999998766566789999999999999999999998 99999999999999999999999
Q ss_pred eccCCccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhh-HHHHHHhhcC
Q 035862 226 DFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQ-KLLEWVKQFP 304 (393)
Q Consensus 226 Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~-~~~~~~~~~~ 304 (393)
|||++...... .......|++.|+|||++.+..++.++|||||||++|||++|.+||......... .+.... ..+
T Consensus 153 Dfg~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~-~~~ 228 (290)
T cd07862 153 DFGLARIYSFQ---MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVI-GLP 228 (290)
T ss_pred cccceEeccCC---cccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHh-CCC
Confidence 99999764332 1234457899999999998889999999999999999999999999876543221 111111 111
Q ss_pred cCCcc-----c-ccccCccc---ccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 035862 305 ADGKK-----F-SMMIDPRL---RNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLK 356 (393)
Q Consensus 305 ~~~~~-----~-~~~~~~~~---~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~ 356 (393)
..... . ........ .......++..+.+|+.+||+.||++|||+.++++|.|
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~hp~ 289 (290)
T cd07862 229 GEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPY 289 (290)
T ss_pred ChhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhcCCC
Confidence 11000 0 00000000 00111235677899999999999999999999998764
No 56
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=2.3e-43 Score=330.24 Aligned_cols=275 Identities=24% Similarity=0.369 Sum_probs=202.4
Q ss_pred CCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCC--CcccHHHHHHHHHHhhcCCCCccceeeeeeecCCcc-
Q 035862 73 GFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNH--GLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDER- 149 (393)
Q Consensus 73 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~- 149 (393)
+|++.+.||+|+||.||+|.+..++ ..||+|.+... .......+.+|+.+++.++||||+++++++...+..
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 75 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTG-----EKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRRE 75 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCC-----CEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCC
Confidence 5889999999999999999965433 46999988643 222345678899999999999999999988654321
Q ss_pred cceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccC
Q 035862 150 GIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGL 229 (393)
Q Consensus 150 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~ 229 (393)
....|+||||+ +++|.+++. ....+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 76 ~~~~~lv~e~~-~~~L~~~l~--~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kL~Dfg~ 149 (338)
T cd07859 76 FKDIYVVFELM-ESDLHQVIK--ANDDLTPEHHQFFLYQLLRALKYIHTA---NVFHRDLKPKNILANADCKLKICDFGL 149 (338)
T ss_pred CceEEEEEecC-CCCHHHHHH--hcccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEccCcc
Confidence 22569999999 469999884 344689999999999999999999999 999999999999999999999999999
Q ss_pred CccCCCCCC-ccccccccccCCccCcccccc--CCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcC
Q 035862 230 AREGPTGDH-THVSTAVVGTYGYAAPEYIET--GHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPAD 306 (393)
Q Consensus 230 a~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~ 306 (393)
+........ ........|++.|+|||++.+ ..++.++|||||||++|+|++|++||..................+..
T Consensus 150 ~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~ 229 (338)
T cd07859 150 ARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSP 229 (338)
T ss_pred ccccccccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCH
Confidence 975432221 112234679999999999865 67899999999999999999999999765432211111100000000
Q ss_pred C----------cccccccCccccccc---CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q 035862 307 G----------KKFSMMIDPRLRNQY---SINAARRVAKLADNCLKKNPEERPTMNQVVESLKLA 358 (393)
Q Consensus 307 ~----------~~~~~~~~~~~~~~~---~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~ 358 (393)
. ......+.+...... -...+..+.+++.+||+.||++|||+.++++|.|..
T Consensus 230 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~hp~f~ 294 (338)
T cd07859 230 ETISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYFK 294 (338)
T ss_pred HHHHHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcCchhh
Confidence 0 000000000000000 012356788999999999999999999999998864
No 57
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=4.1e-43 Score=323.58 Aligned_cols=272 Identities=23% Similarity=0.369 Sum_probs=202.0
Q ss_pred hcCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCc-ccHHHHHHHHHHhhcCCCCccceeeeeeecCCcc
Q 035862 71 TNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL-QGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDER 149 (393)
Q Consensus 71 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 149 (393)
.++|++.+.||+|+||.||+|.+..+ +..||+|++..... .....+.+|+.+++.++||||+++++++...+
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~-----~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-- 76 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVN-----GKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKE-- 76 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCC-----CCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCC--
Confidence 36799999999999999999997543 34699999875432 22345678999999999999999999998766
Q ss_pred cceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccC
Q 035862 150 GIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGL 229 (393)
Q Consensus 150 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~ 229 (393)
..++||||+. ++|.+++... ...+++..+..++.|++.||.|||++ +|+||||||+|||+++++.+||+|||+
T Consensus 77 --~~~lv~e~~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~ 149 (303)
T cd07869 77 --TLTLVFEYVH-TDLCQYMDKH-PGGLHPENVKLFLFQLLRGLSYIHQR---YILHRDLKPQNLLISDTGELKLADFGL 149 (303)
T ss_pred --eEEEEEECCC-cCHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECCCCc
Confidence 5699999995 6888877543 34588899999999999999999998 999999999999999999999999999
Q ss_pred CccCCCCCCccccccccccCCccCcccccc-CCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHH-HHHHhhcCcCC
Q 035862 230 AREGPTGDHTHVSTAVVGTYGYAAPEYIET-GHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKL-LEWVKQFPADG 307 (393)
Q Consensus 230 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~-~~~~~~~~~~~ 307 (393)
+........ ......+++.|+|||++.+ ..++.++|||||||++|+|++|..||.......+... .......+...
T Consensus 150 ~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 227 (303)
T cd07869 150 ARAKSVPSH--TYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNED 227 (303)
T ss_pred ceeccCCCc--cCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChh
Confidence 875432211 2234578999999998865 4688999999999999999999999986543222111 11110111000
Q ss_pred -------------cccccccCcccccccC-HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q 035862 308 -------------KKFSMMIDPRLRNQYS-INAARRVAKLADNCLKKNPEERPTMNQVVESLKLA 358 (393)
Q Consensus 308 -------------~~~~~~~~~~~~~~~~-~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~ 358 (393)
..+.......+..... ...+.++.+|+.+||+.||++|||+.++++|.|..
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h~~f~ 292 (303)
T cd07869 228 TWPGVHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSHEYFS 292 (303)
T ss_pred hccchhhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcCcccc
Confidence 0000000000000000 01236788999999999999999999999998763
No 58
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=3e-43 Score=334.31 Aligned_cols=266 Identities=20% Similarity=0.268 Sum_probs=200.0
Q ss_pred hcCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcccHHHHHHHHHHhhcCCCCccceeeeeeecCCccc
Q 035862 71 TNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERG 150 (393)
Q Consensus 71 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 150 (393)
.++|++.+.||+|+||.||+|.+..++. .||+|.... ..+.+|+.+++.++||||+++++++....
T Consensus 91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~-----~vaiK~~~~------~~~~~E~~il~~l~HpnIv~~~~~~~~~~--- 156 (391)
T PHA03212 91 KAGFSILETFTPGAEGFAFACIDNKTCE-----HVVIKAGQR------GGTATEAHILRAINHPSIIQLKGTFTYNK--- 156 (391)
T ss_pred cCCcEEEEEEcCCCCeEEEEEEECCCCC-----EEEEechhh------hhhHHHHHHHHhCCCCCCCCEeEEEEECC---
Confidence 3679999999999999999999765443 599997532 34678999999999999999999998765
Q ss_pred ceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCC
Q 035862 151 IQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLA 230 (393)
Q Consensus 151 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a 230 (393)
..++|||++ +++|..++.. ...+++..++.++.||+.||.|||++ +|+||||||+|||++.++.+||+|||++
T Consensus 157 -~~~lv~e~~-~~~L~~~l~~--~~~l~~~~~~~i~~qi~~aL~ylH~~---~IvHrDiKP~NIll~~~~~vkL~DFG~a 229 (391)
T PHA03212 157 -FTCLILPRY-KTDLYCYLAA--KRNIAICDILAIERSVLRAIQYLHEN---RIIHRDIKAENIFINHPGDVCLGDFGAA 229 (391)
T ss_pred -eeEEEEecC-CCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHhEEEcCCCCEEEEeCCcc
Confidence 559999999 4689888843 34688999999999999999999998 9999999999999999999999999999
Q ss_pred ccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCch-----hhh---HHHHHHhh
Q 035862 231 REGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPT-----MEQ---KLLEWVKQ 302 (393)
Q Consensus 231 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~-----~~~---~~~~~~~~ 302 (393)
........ .......||+.|+|||++.+..++.++|||||||++|||++|..||...... ... .+......
T Consensus 230 ~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~ 308 (391)
T PHA03212 230 CFPVDINA-NKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGT 308 (391)
T ss_pred cccccccc-cccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcC
Confidence 75322211 1223457999999999999999999999999999999999999887543211 011 11111110
Q ss_pred cC----cCCc-ccccc---------cCccccc--ccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q 035862 303 FP----ADGK-KFSMM---------IDPRLRN--QYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLA 358 (393)
Q Consensus 303 ~~----~~~~-~~~~~---------~~~~~~~--~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~ 358 (393)
.+ .... ..... ..+..+. ......+.++.+|+.+||+.||.+|||+.++++|.|..
T Consensus 309 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~hp~f~ 380 (391)
T PHA03212 309 HPNEFPIDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDFAAFQ 380 (391)
T ss_pred ChhhcCcchhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcChhhc
Confidence 00 0000 00000 0000000 01113567899999999999999999999999999874
No 59
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=7.2e-43 Score=319.59 Aligned_cols=267 Identities=27% Similarity=0.433 Sum_probs=213.0
Q ss_pred cCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcccHHHHHHHHHHhhcCCCCccceeeeeeecCCcccc
Q 035862 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGI 151 (393)
Q Consensus 72 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 151 (393)
++|.+.+.||+|+||.||++.............+++|.+..........+.+|+.+++.++||||+++++++...+
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~---- 80 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGD---- 80 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCC----
Confidence 4688999999999999999986544344566779999987665555667889999999999999999999998765
Q ss_pred eEEEEEeecCCCChHHHHhhcC-----------CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCC
Q 035862 152 QRLLVYEYMPNRSLEDRLFSRA-----------QPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNF 220 (393)
Q Consensus 152 ~~~lv~e~~~~~~L~~~l~~~~-----------~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~ 220 (393)
..++||||+.+++|.+++.... ...+++..++.++.|++.||+|||+. |++||||||+||++++++
T Consensus 81 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~---~i~H~dlkp~Nili~~~~ 157 (288)
T cd05093 81 PLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENL 157 (288)
T ss_pred ccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEEccCC
Confidence 4599999999999999985432 23489999999999999999999998 999999999999999999
Q ss_pred ceEEeeccCCccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHh-CCCccCCCCchhhhHHHHH
Q 035862 221 KPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILT-GRRVLERNRPTMEQKLLEW 299 (393)
Q Consensus 221 ~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ellt-g~~pf~~~~~~~~~~~~~~ 299 (393)
.++|+|||++................++..|+|||.+.+..++.++|||||||++|+|++ |..||....... ....
T Consensus 158 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~---~~~~ 234 (288)
T cd05093 158 LVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNE---VIEC 234 (288)
T ss_pred cEEeccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH---HHHH
Confidence 999999999976533322222233456778999999998999999999999999999998 899986554321 1111
Q ss_pred HhhcCcCCcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhh
Q 035862 300 VKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQES 362 (393)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~~~~~ 362 (393)
...... ...+...+.++.+|+.+||+.||.+|||+.++++.|+.+....
T Consensus 235 i~~~~~--------------~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~~~ 283 (288)
T cd05093 235 ITQGRV--------------LQRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAKAS 283 (288)
T ss_pred HHcCCc--------------CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHhc
Confidence 111000 0001123567999999999999999999999999999887653
No 60
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=1.2e-42 Score=322.31 Aligned_cols=264 Identities=25% Similarity=0.399 Sum_probs=208.1
Q ss_pred cCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCC-cccHHHHHHHHHHhhcCCCCccceeeeeeecCCccc
Q 035862 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG-LQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERG 150 (393)
Q Consensus 72 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 150 (393)
.+|+..+.||+|+||.||+|.+...+ ......||+|.+.... ......+.+|+.+++.++||||+++++++....
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~-~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~~--- 82 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEG-EKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST--- 82 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCC-CccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCCC---
Confidence 46999999999999999999875433 2334568999987543 234566888999999999999999999987643
Q ss_pred ceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCC
Q 035862 151 IQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLA 230 (393)
Q Consensus 151 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a 230 (393)
.++++||+.+|+|.+++.... ..+++..++.++.|++.||+|||+. +|+||||||+|||+++++.+||+|||++
T Consensus 83 --~~~v~e~~~~g~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~---~iiH~dlkp~Nill~~~~~~kl~DfG~a 156 (316)
T cd05108 83 --VQLITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEER---RLVHRDLAARNVLVKTPQHVKITDFGLA 156 (316)
T ss_pred --ceeeeecCCCCCHHHHHHhcc-ccCCHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheEecCCCcEEEcccccc
Confidence 378999999999999986433 4578889999999999999999998 9999999999999999999999999999
Q ss_pred ccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHh-CCCccCCCCchhhhHHHHHHhhcCcCCcc
Q 035862 231 REGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILT-GRRVLERNRPTMEQKLLEWVKQFPADGKK 309 (393)
Q Consensus 231 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 309 (393)
................++..|+|||++.+..++.++|||||||++|||++ |..||........ ...... +.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~~---~~~~~~----~~- 228 (316)
T cd05108 157 KLLGADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI---SSILEK----GE- 228 (316)
T ss_pred ccccCCCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHH---HHHHhC----CC-
Confidence 87544332222223345678999999999999999999999999999998 9999976433221 111111 00
Q ss_pred cccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhh
Q 035862 310 FSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQES 362 (393)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~~~~~ 362 (393)
....+..++.++.+++.+||..+|.+||++.+++..+..+..+.
T Consensus 229 ---------~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~~~ 272 (316)
T cd05108 229 ---------RLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDP 272 (316)
T ss_pred ---------CCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHcCC
Confidence 00111123467899999999999999999999999999887654
No 61
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=2.9e-43 Score=334.73 Aligned_cols=267 Identities=25% Similarity=0.375 Sum_probs=210.1
Q ss_pred hcCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCc-ccHHHHHHHHHHhhcCC-CCccceeeeeeecCCc
Q 035862 71 TNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL-QGHKQWLAEVQFLGVVS-HPNLVKLLGYCSTEDE 148 (393)
Q Consensus 71 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~ 148 (393)
.++|++.+.||+|+||.||+|.+...........||+|++..... .....+.+|+.+++.+. ||||+++++++...+
T Consensus 36 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~- 114 (400)
T cd05105 36 RDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSG- 114 (400)
T ss_pred ccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCC-
Confidence 467999999999999999999976555445566799999975432 23456889999999996 999999999997766
Q ss_pred ccceEEEEEeecCCCChHHHHhhcC-------------------------------------------------------
Q 035862 149 RGIQRLLVYEYMPNRSLEDRLFSRA------------------------------------------------------- 173 (393)
Q Consensus 149 ~~~~~~lv~e~~~~~~L~~~l~~~~------------------------------------------------------- 173 (393)
..++||||+++|+|.+++....
T Consensus 115 ---~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (400)
T cd05105 115 ---PIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPM 191 (400)
T ss_pred ---ceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchh
Confidence 4599999999999999885421
Q ss_pred ---------------------------------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCe
Q 035862 174 ---------------------------------------QPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNV 214 (393)
Q Consensus 174 ---------------------------------------~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NI 214 (393)
...+++..++.++.|++.||.|||+. +++||||||+||
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dikp~Ni 268 (400)
T cd05105 192 LEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASK---NCVHRDLAARNV 268 (400)
T ss_pred hhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHhE
Confidence 12477888899999999999999998 999999999999
Q ss_pred EeCCCCceEEeeccCCccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHh-CCCccCCCCchhh
Q 035862 215 LLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILT-GRRVLERNRPTME 293 (393)
Q Consensus 215 ll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ellt-g~~pf~~~~~~~~ 293 (393)
|+++++.+||+|||++................++..|+|||.+.+..++.++|||||||++|+|++ |..||.......
T Consensus 269 ll~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~- 347 (400)
T cd05105 269 LLAQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDS- 347 (400)
T ss_pred EEeCCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhH-
Confidence 999999999999999976533322222233456788999999998899999999999999999997 889987542211
Q ss_pred hHHHHHHhhcCcCCcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHh
Q 035862 294 QKLLEWVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQ 360 (393)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~~~ 360 (393)
.+...... ......+..++.++.+++.+||+.||++||++.++.+.|..+..
T Consensus 348 -~~~~~~~~--------------~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~~ 399 (400)
T cd05105 348 -TFYNKIKS--------------GYRMAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLLP 399 (400)
T ss_pred -HHHHHHhc--------------CCCCCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHcC
Confidence 11111110 00111122456789999999999999999999999999987753
No 62
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=3.4e-43 Score=339.04 Aligned_cols=271 Identities=23% Similarity=0.343 Sum_probs=201.6
Q ss_pred hcCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcccHHHHHHHHHHhhcCCCCccceeeeeeecCC---
Q 035862 71 TNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTED--- 147 (393)
Q Consensus 71 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--- 147 (393)
..+|.+.+.||+|+||.||+|.+..++ ..||+|++.... ....+|+.+++.++||||+++++++....
T Consensus 65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~-----~~vAiK~i~~~~----~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~ 135 (440)
T PTZ00036 65 NKSYKLGNIIGNGSFGVVYEAICIDTS-----EKVAIKKVLQDP----QYKNRELLIMKNLNHINIIFLKDYYYTECFKK 135 (440)
T ss_pred CCeEEEeEEEEeCCCEEEEEEEECCCC-----CEEEEEEEecCc----chHHHHHHHHHhcCCCCCcceeeeEeeccccc
Confidence 457999999999999999999975443 359999886532 22347999999999999999998775432
Q ss_pred -cccceEEEEEeecCCCChHHHHhh--cCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCC-ceE
Q 035862 148 -ERGIQRLLVYEYMPNRSLEDRLFS--RAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNF-KPK 223 (393)
Q Consensus 148 -~~~~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~-~~k 223 (393)
....++++||||+.+ +|.+++.. .....+++..++.++.||+.||.|||+. +|+||||||+|||++.++ .+|
T Consensus 136 ~~~~~~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~---~IiHrDLKp~NILl~~~~~~vk 211 (440)
T PTZ00036 136 NEKNIFLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSK---FICHRDLKPQNLLIDPNTHTLK 211 (440)
T ss_pred CCCceEEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCcCHHHEEEcCCCCcee
Confidence 222356899999965 78777642 3446789999999999999999999998 999999999999998665 799
Q ss_pred EeeccCCccCCCCCCccccccccccCCccCcccccc-CCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhH-HHHHHh
Q 035862 224 LSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIET-GHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQK-LLEWVK 301 (393)
Q Consensus 224 l~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~-~~~~~~ 301 (393)
|+|||++....... ......||+.|+|||++.+ ..++.++|||||||++|||++|.+||.......... ......
T Consensus 212 L~DFGla~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~ 288 (440)
T PTZ00036 212 LCDFGSAKNLLAGQ---RSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLG 288 (440)
T ss_pred eeccccchhccCCC---CcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhC
Confidence 99999998654322 1234578999999998866 468999999999999999999999997654432211 111110
Q ss_pred hcCcC-----------CcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q 035862 302 QFPAD-----------GKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLA 358 (393)
Q Consensus 302 ~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~ 358 (393)
.+.. ...+.......+...++...+.++.+||.+||++||.+|||+.+++.|.|..
T Consensus 289 -~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp~f~ 355 (440)
T PTZ00036 289 -TPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPFFD 355 (440)
T ss_pred -CCCHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCChhHH
Confidence 0000 0000111111122222334567899999999999999999999999998864
No 63
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=5.1e-43 Score=329.70 Aligned_cols=256 Identities=27% Similarity=0.371 Sum_probs=198.3
Q ss_pred hcCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCc-ccHHHHHHHHHHhhcCCCCccceeeeeeecCCcc
Q 035862 71 TNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL-QGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDER 149 (393)
Q Consensus 71 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 149 (393)
.++|+.++.||+|+||.||+|.+..++ ..||+|.+..... .....+.+|+++++.++|+||+++++++...+
T Consensus 73 ~~~~~~~~~lg~G~~g~V~~~~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-- 145 (353)
T PLN00034 73 LSELERVNRIGSGAGGTVYKVIHRPTG-----RLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNG-- 145 (353)
T ss_pred HHHHhhhhhccCCCCeEEEEEEECCCC-----CEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCC--
Confidence 345778889999999999999865433 4699999865432 33456789999999999999999999987766
Q ss_pred cceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccC
Q 035862 150 GIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGL 229 (393)
Q Consensus 150 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~ 229 (393)
..++||||+++++|.+.. ...+..+..++.||+.||.|||++ +|+||||||+|||+++++.+||+|||+
T Consensus 146 --~~~lv~e~~~~~~L~~~~------~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DfG~ 214 (353)
T PLN00034 146 --EIQVLLEFMDGGSLEGTH------IADEQFLADVARQILSGIAYLHRR---HIVHRDIKPSNLLINSAKNVKIADFGV 214 (353)
T ss_pred --eEEEEEecCCCCcccccc------cCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEccccc
Confidence 569999999999986532 346778889999999999999998 999999999999999999999999999
Q ss_pred CccCCCCCCccccccccccCCccCcccccc-----CCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcC
Q 035862 230 AREGPTGDHTHVSTAVVGTYGYAAPEYIET-----GHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFP 304 (393)
Q Consensus 230 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~ 304 (393)
+........ ......|+..|+|||++.. ...+.++|||||||++|||++|+.||.................
T Consensus 215 ~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~-- 290 (353)
T PLN00034 215 SRILAQTMD--PCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAICM-- 290 (353)
T ss_pred ceecccccc--cccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHhc--
Confidence 976432211 1234579999999998743 2345689999999999999999999974332211111111100
Q ss_pred cCCcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHh
Q 035862 305 ADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQ 360 (393)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~~~ 360 (393)
......+..++.++.+||.+||+.||++||++.++++|.|....
T Consensus 291 ------------~~~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~hp~~~~~ 334 (353)
T PLN00034 291 ------------SQPPEAPATASREFRHFISCCLQREPAKRWSAMQLLQHPFILRA 334 (353)
T ss_pred ------------cCCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcCcccccC
Confidence 00011122456789999999999999999999999999987754
No 64
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=1.1e-42 Score=318.75 Aligned_cols=265 Identities=27% Similarity=0.450 Sum_probs=213.8
Q ss_pred cCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcccHHHHHHHHHHhhcCCCCccceeeeeeecCCcccc
Q 035862 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGI 151 (393)
Q Consensus 72 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 151 (393)
.+|.+.+.||+|+||.||+|.+...........+++|.+..........+.+|+.+++.++||||+++++++...+
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~---- 80 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGD---- 80 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCC----
Confidence 4588889999999999999987655445566779999987665555567889999999999999999999998766
Q ss_pred eEEEEEeecCCCChHHHHhhcC--------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeC
Q 035862 152 QRLLVYEYMPNRSLEDRLFSRA--------------QPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLD 217 (393)
Q Consensus 152 ~~~lv~e~~~~~~L~~~l~~~~--------------~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~ 217 (393)
..++||||+++++|.+++.... ...+++..++.++.||+.||+|||++ +++||||||+||+++
T Consensus 81 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~Nil~~ 157 (291)
T cd05094 81 PLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQ---HFVHRDLATRNCLVG 157 (291)
T ss_pred ceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEEc
Confidence 4599999999999999996432 23478999999999999999999998 999999999999999
Q ss_pred CCCceEEeeccCCccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHh-CCCccCCCCchhhhHH
Q 035862 218 GNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILT-GRRVLERNRPTMEQKL 296 (393)
Q Consensus 218 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ellt-g~~pf~~~~~~~~~~~ 296 (393)
.++.++|+|||++................++..|+|||.+.+..++.++|||||||++|+|++ |..||....... .
T Consensus 158 ~~~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~---~ 234 (291)
T cd05094 158 ANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTE---V 234 (291)
T ss_pred cCCcEEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH---H
Confidence 999999999999976544332223344567789999999999999999999999999999999 999986654322 1
Q ss_pred HHHHhhcCcCCcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHh
Q 035862 297 LEWVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQ 360 (393)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~~~ 360 (393)
........ ....+..++..+.+++.+||+.+|++||++.++++.|..+..
T Consensus 235 ~~~~~~~~--------------~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~ 284 (291)
T cd05094 235 IECITQGR--------------VLERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGK 284 (291)
T ss_pred HHHHhCCC--------------CCCCCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHh
Confidence 11111100 000111245779999999999999999999999999999865
No 65
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=6.7e-43 Score=318.33 Aligned_cols=261 Identities=30% Similarity=0.473 Sum_probs=208.5
Q ss_pred cCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcc-cHHHHHHHHHHhhcCCCCccceeeeeeecCCccc
Q 035862 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQ-GHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERG 150 (393)
Q Consensus 72 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 150 (393)
++|.+.+.||+|+||.||+|.+...........|++|.+...... ....+.+|+++++.++||||+++++++....
T Consensus 5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--- 81 (280)
T cd05049 5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGD--- 81 (280)
T ss_pred HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCC---
Confidence 458888999999999999998765544455678999998765433 3467889999999999999999999998775
Q ss_pred ceEEEEEeecCCCChHHHHhhcC------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCC
Q 035862 151 IQRLLVYEYMPNRSLEDRLFSRA------------QPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDG 218 (393)
Q Consensus 151 ~~~~lv~e~~~~~~L~~~l~~~~------------~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~ 218 (393)
..++||||+++++|.+++.... ...+++..+..++.|++.|+.|||++ +++||||||+||+++.
T Consensus 82 -~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~h~dlkp~nili~~ 157 (280)
T cd05049 82 -PPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQ---HFVHRDLATRNCLVGY 157 (280)
T ss_pred -CeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeeccccccceEEEcC
Confidence 5699999999999999996432 24578889999999999999999998 9999999999999999
Q ss_pred CCceEEeeccCCccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHh-CCCccCCCCchhhhHHH
Q 035862 219 NFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILT-GRRVLERNRPTMEQKLL 297 (393)
Q Consensus 219 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ellt-g~~pf~~~~~~~~~~~~ 297 (393)
++.+||+|||++................++..|+|||++.+..++.++|||||||++|+|++ |..||.........
T Consensus 158 ~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~~~--- 234 (280)
T cd05049 158 DLVVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEVI--- 234 (280)
T ss_pred CCeEEECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHH---
Confidence 99999999999875433222222234456788999999999999999999999999999998 99998765432211
Q ss_pred HHHhhcCcCCcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 035862 298 EWVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLK 356 (393)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~ 356 (393)
..... + .....+..++..+.+++.+||+.||++||++.++++.|.
T Consensus 235 ~~~~~----~----------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~ 279 (280)
T cd05049 235 ECITQ----G----------RLLQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQ 279 (280)
T ss_pred HHHHc----C----------CcCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence 11111 0 000111234578999999999999999999999999875
No 66
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-43 Score=328.72 Aligned_cols=263 Identities=28% Similarity=0.448 Sum_probs=212.1
Q ss_pred HHHHHHhcCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCC--cccHHHHHHHHHHhhcCCCCccceeeee
Q 035862 65 QELREATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG--LQGHKQWLAEVQFLGVVSHPNLVKLLGY 142 (393)
Q Consensus 65 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~ 142 (393)
++.+...+...+...||+|.||+||+|.+-. -||||+++-.. ....+.|.+|+..+++-+|.||+-|.|+
T Consensus 385 ~~WeIp~~ev~l~~rIGsGsFGtV~Rg~whG--------dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~ 456 (678)
T KOG0193|consen 385 EEWEIPPEEVLLGERIGSGSFGTVYRGRWHG--------DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGA 456 (678)
T ss_pred cccccCHHHhhccceeccccccceeeccccc--------ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehh
Confidence 4444555667888999999999999999752 19999987543 3455778999999999999999999999
Q ss_pred eecCCcccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCce
Q 035862 143 CSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKP 222 (393)
Q Consensus 143 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~ 222 (393)
|..+.. .+|+.||+|-+|..+++..+ ..+...+.+.|++|++.|+.|||.+ +|||||||..|||+.++++|
T Consensus 457 ~~~p~~-----AIiTqwCeGsSLY~hlHv~e-tkfdm~~~idIAqQiaqGM~YLHAK---~IIHrDLKSnNIFl~~~~kV 527 (678)
T KOG0193|consen 457 CMNPPL-----AIITQWCEGSSLYTHLHVQE-TKFDMNTTIDIAQQIAQGMDYLHAK---NIIHRDLKSNNIFLHEDLKV 527 (678)
T ss_pred hcCCce-----eeeehhccCchhhhhccchh-hhhhHHHHHHHHHHHHHhhhhhhhh---hhhhhhccccceEEccCCcE
Confidence 987762 89999999999999997655 4588899999999999999999999 99999999999999999999
Q ss_pred EEeeccCCccCCCCCCccccccccccCCccCcccccc---CCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHH
Q 035862 223 KLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIET---GHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEW 299 (393)
Q Consensus 223 kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~ 299 (393)
||+|||++................|...|||||++.. .+|+..+||||||+++|||+||..||..+.. ++.+.
T Consensus 528 kIgDFGLatvk~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~--dqIif-- 603 (678)
T KOG0193|consen 528 KIGDFGLATVKTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNR--DQIIF-- 603 (678)
T ss_pred EEecccceeeeeeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCCh--hheEE--
Confidence 9999999976444333333344567789999999953 4789999999999999999999999984322 11111
Q ss_pred HhhcCcCCcccccccCccc----ccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhh
Q 035862 300 VKQFPADGKKFSMMIDPRL----RNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQE 361 (393)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~~~~ 361 (393)
++.+++ ......+++.++.+|+..||.+++++||.+.+|+..|..++..
T Consensus 604 -------------mVGrG~l~pd~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~~ 656 (678)
T KOG0193|consen 604 -------------MVGRGYLMPDLSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLPS 656 (678)
T ss_pred -------------EecccccCccchhhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhhc
Confidence 111111 1112235678999999999999999999999999988888763
No 67
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.9e-44 Score=303.53 Aligned_cols=260 Identities=25% Similarity=0.378 Sum_probs=209.1
Q ss_pred HHHhcCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCc----c----cHHHHHHHHHHhhcCC-CCccce
Q 035862 68 REATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL----Q----GHKQWLAEVQFLGVVS-HPNLVK 138 (393)
Q Consensus 68 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~----~----~~~~~~~E~~~l~~l~-h~niv~ 138 (393)
+...+.|.-.+.||.|..++|-++..+.++.+ +|+|++..... . ..+.-.+|+.||+++. ||||++
T Consensus 13 ~~fy~~y~pkeilgrgvss~vrRci~k~t~~e-----~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~ 87 (411)
T KOG0599|consen 13 KGFYAKYEPKEILGRGVSSVVRRCIHKETGKE-----FAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIID 87 (411)
T ss_pred hhHHhhcChHHHhcccchhhhhhhhhcccccc-----eeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEE
Confidence 44566788888999999999988886655544 88888753211 1 1233467999999986 999999
Q ss_pred eeeeeecCCcccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCC
Q 035862 139 LLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDG 218 (393)
Q Consensus 139 ~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~ 218 (393)
+.+++..+. .+++|+|.|..|.|.|+| .+.-++++...+.|++|+.+|++|||.. +||||||||+|||+++
T Consensus 88 l~D~yes~s----F~FlVFdl~prGELFDyL--ts~VtlSEK~tR~iMrqlfegVeylHa~---~IVHRDLKpENILldd 158 (411)
T KOG0599|consen 88 LQDVYESDA----FVFLVFDLMPRGELFDYL--TSKVTLSEKETRRIMRQLFEGVEYLHAR---NIVHRDLKPENILLDD 158 (411)
T ss_pred eeeeccCcc----hhhhhhhhcccchHHHHh--hhheeecHHHHHHHHHHHHHHHHHHHHh---hhhhcccChhheeecc
Confidence 999998776 569999999999999999 5556799999999999999999999999 9999999999999999
Q ss_pred CCceEEeeccCCccCCCCCCccccccccccCCccCcccccc------CCCCchhhHHHHHHHHHHHHhCCCccCCCCchh
Q 035862 219 NFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIET------GHLKSQSDIWSFGVVLYEILTGRRVLERNRPTM 292 (393)
Q Consensus 219 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslGvil~elltg~~pf~~~~~~~ 292 (393)
+-++||+|||++.....++. ....||||+|+|||.+.. ..|+..+|+|++|||+|.|+.|++||.....-.
T Consensus 159 n~~i~isDFGFa~~l~~Gek---LrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQml 235 (411)
T KOG0599|consen 159 NMNIKISDFGFACQLEPGEK---LRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQML 235 (411)
T ss_pred ccceEEeccceeeccCCchh---HHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHH
Confidence 99999999999998876653 357899999999998853 468889999999999999999999998653322
Q ss_pred hhHHHHHHhhcCcCCcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q 035862 293 EQKLLEWVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLA 358 (393)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~ 358 (393)
....+... .+.+ ..+-=.+.+.+..+||.+||+.||.+|.|++|++.|.+.+
T Consensus 236 MLR~ImeG-kyqF-------------~speWadis~~~KdLIsrlLqVdp~~Ritake~LaHpff~ 287 (411)
T KOG0599|consen 236 MLRMIMEG-KYQF-------------RSPEWADISATVKDLISRLLQVDPTKRITAKEALAHPFFI 287 (411)
T ss_pred HHHHHHhc-cccc-------------CCcchhhccccHHHHHHHHHeeCchhcccHHHHhcChHHH
Confidence 21111100 1111 1111125678899999999999999999999999998764
No 68
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-43 Score=327.41 Aligned_cols=254 Identities=26% Similarity=0.337 Sum_probs=213.0
Q ss_pred hcCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcc---cHHHHHHHHHHhhcCC-CCccceeeeeeecC
Q 035862 71 TNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQ---GHKQWLAEVQFLGVVS-HPNLVKLLGYCSTE 146 (393)
Q Consensus 71 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~ 146 (393)
...|++.+.||.|.||.||++..+.++ ..+|+|.+.+.... ....+.+|+.+|+++. ||||+.++++|.+.
T Consensus 34 ~~~Y~l~~~lG~G~Fg~v~~~~~~~tg-----~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~ 108 (382)
T KOG0032|consen 34 KEKYELGRELGRGQFGVVYLCREKSTG-----KEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDP 108 (382)
T ss_pred cccEEehhhhCCCCceEEEEEEecCCC-----ceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcC
Confidence 456889999999999999999976554 45999999876543 3357889999999999 99999999999988
Q ss_pred CcccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCC----Cce
Q 035862 147 DERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGN----FKP 222 (393)
Q Consensus 147 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~----~~~ 222 (393)
+ ..++|||++.||.|.+.+... .+++..+..++.|++.++.|||+. |++||||||+|+|+... +.+
T Consensus 109 ~----~~~lvmEL~~GGeLfd~i~~~---~~sE~da~~~~~~il~av~~lH~~---gvvHrDlKpEN~L~~~~~~~~~~i 178 (382)
T KOG0032|consen 109 D----SVYLVMELCEGGELFDRIVKK---HYSERDAAGIIRQILEAVKYLHSL---GVVHRDLKPENLLLASKDEGSGRI 178 (382)
T ss_pred C----eEEEEEEecCCchHHHHHHHc---cCCHHHHHHHHHHHHHHHHHHHhC---CceeccCCHHHeeeccccCCCCcE
Confidence 8 559999999999999999665 389999999999999999999998 99999999999999543 579
Q ss_pred EEeeccCCccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhh
Q 035862 223 KLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQ 302 (393)
Q Consensus 223 kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~ 302 (393)
|++|||++..... .......+||+.|+|||++....|+..+||||+||++|.|++|.+||...........+ ...
T Consensus 179 k~~DFGla~~~~~---~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i--~~~ 253 (382)
T KOG0032|consen 179 KLIDFGLAKFIKP---GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAI--LRG 253 (382)
T ss_pred EEeeCCCceEccC---CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHH--HcC
Confidence 9999999998655 22456789999999999999999999999999999999999999999877654333211 111
Q ss_pred cCcCCcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 035862 303 FPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLK 356 (393)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~ 356 (393)
-. ......-..++..+.+|+..||..||..|+|+.++++|+|
T Consensus 254 ~~------------~f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~HpW 295 (382)
T KOG0032|consen 254 DF------------DFTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQHPW 295 (382)
T ss_pred CC------------CCCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhcCcc
Confidence 00 1111222246789999999999999999999999999998
No 69
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-43 Score=352.01 Aligned_cols=268 Identities=29% Similarity=0.468 Sum_probs=222.9
Q ss_pred CCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCC-CcccHHHHHHHHHHhhcCCCCccceeeeeeecCCcccc
Q 035862 73 GFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNH-GLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGI 151 (393)
Q Consensus 73 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 151 (393)
.-...+.||+|+||.||.|.+.+.........||+|.+.+. +.+....|++|..+|+.++|||||+++|++......
T Consensus 693 ~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~-- 770 (1025)
T KOG1095|consen 693 NVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPP-- 770 (1025)
T ss_pred heEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCc--
Confidence 35567789999999999999887665555788999999875 445667899999999999999999999999986644
Q ss_pred eEEEEEeecCCCChHHHHhhcC-----CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEee
Q 035862 152 QRLLVYEYMPNRSLEDRLFSRA-----QPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSD 226 (393)
Q Consensus 152 ~~~lv~e~~~~~~L~~~l~~~~-----~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~D 226 (393)
++++|||+||+|..||+... ...++....+.++.||++|+.||+++ ++|||||..+|+|++....+||+|
T Consensus 771 --~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~---~fvHRDLAaRNCLL~~~r~VKIaD 845 (1025)
T KOG1095|consen 771 --LILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESK---HFVHRDLAARNCLLDERRVVKIAD 845 (1025)
T ss_pred --EEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhC---CCcCcchhhhheeecccCcEEEcc
Confidence 89999999999999996541 34578889999999999999999999 999999999999999999999999
Q ss_pred ccCCccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHh-CCCccCCCCchhhhHHHHHHhhcCc
Q 035862 227 FGLAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILT-GRRVLERNRPTMEQKLLEWVKQFPA 305 (393)
Q Consensus 227 fg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~ 305 (393)
||+|+.....+.+.......-...|||||.+..+.++.|+|||||||++||++| |..||...+....-. .+.
T Consensus 846 FGlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~--~~~----- 918 (1025)
T KOG1095|consen 846 FGLARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLL--DVL----- 918 (1025)
T ss_pred cchhHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHHHH--HHH-----
Confidence 999996655555544444344568999999999999999999999999999999 888887654432111 111
Q ss_pred CCcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhhcC
Q 035862 306 DGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQESEQ 364 (393)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~~~~~~~ 364 (393)
..+ +...+..|++.++++|..||+.+|++||++..|++.+..+.+....
T Consensus 919 ---------~gg-RL~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~~~~ 967 (1025)
T KOG1095|consen 919 ---------EGG-RLDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNAALG 967 (1025)
T ss_pred ---------hCC-ccCCCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhhhhcc
Confidence 111 4445667889999999999999999999999999999888876543
No 70
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=7.3e-43 Score=340.42 Aligned_cols=255 Identities=22% Similarity=0.284 Sum_probs=203.8
Q ss_pred CCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcccHHHHHHHHHHhhcCCCCccceeeeeeecCCcccce
Q 035862 73 GFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQ 152 (393)
Q Consensus 73 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 152 (393)
.|.+.+.||+|+||.||+|....+ ....|++|.+..........+.+|+.+++.++||||+++++++...+ .
T Consensus 68 ~y~~~~~lg~G~~g~vy~a~~~~~----~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~----~ 139 (478)
T PTZ00267 68 MYVLTTLVGRNPTTAAFVATRGSD----PKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDD----K 139 (478)
T ss_pred eEEEEEEEEeCCCcEEEEEEEcCC----CCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECC----E
Confidence 489999999999999999985433 13457888776554444456778999999999999999999998776 5
Q ss_pred EEEEEeecCCCChHHHHhhc--CCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCC
Q 035862 153 RLLVYEYMPNRSLEDRLFSR--AQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLA 230 (393)
Q Consensus 153 ~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a 230 (393)
.++||||+++|+|.+++... ....+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||++
T Consensus 140 ~~lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~~~~~~kL~DFgla 216 (478)
T PTZ00267 140 LLLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSR---KMMHRDLKSANIFLMPTGIIKLGDFGFS 216 (478)
T ss_pred EEEEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCcCHHhEEECCCCcEEEEeCcCc
Confidence 69999999999999988542 344688999999999999999999998 9999999999999999999999999999
Q ss_pred ccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcCCccc
Q 035862 231 REGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKF 310 (393)
Q Consensus 231 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (393)
...............+||+.|+|||++.+..++.++|||||||++|+|++|+.||....... .+.......
T Consensus 217 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~--~~~~~~~~~------- 287 (478)
T PTZ00267 217 KQYSDSVSLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQRE--IMQQVLYGK------- 287 (478)
T ss_pred eecCCccccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHhCC-------
Confidence 86543322223345679999999999999999999999999999999999999997543321 111111000
Q ss_pred ccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 035862 311 SMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESL 355 (393)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l 355 (393)
....+..++.++.+||.+||..||++||++.+++.+.
T Consensus 288 --------~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~~~ 324 (478)
T PTZ00267 288 --------YDPFPCPVSSGMKALLDPLLSKNPALRPTTQQLLHTE 324 (478)
T ss_pred --------CCCCCccCCHHHHHHHHHHhccChhhCcCHHHHHhCH
Confidence 0011223457899999999999999999999998763
No 71
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=1.6e-43 Score=327.60 Aligned_cols=245 Identities=25% Similarity=0.319 Sum_probs=196.7
Q ss_pred ecccCCceEEEEEEcCCCCCCCceEEEEEEecCCC---cccHHHHHHHHHHhhcCCCCccceeeeeeecCCcccceEEEE
Q 035862 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG---LQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLV 156 (393)
Q Consensus 80 lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv 156 (393)
||+|+||.||+|.+..+ +..||+|.+.... ......+.+|+.++..++||||+++++++...+ ..++|
T Consensus 1 lg~G~~g~Vy~~~~~~~-----~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~----~~~lv 71 (312)
T cd05585 1 IGKGSFGKVMQVRKRDT-----QRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPE----KLYLV 71 (312)
T ss_pred CCcCCCeEEEEEEECCC-----CCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCC----eEEEE
Confidence 79999999999997543 3469999986532 233456778999999999999999999988766 56999
Q ss_pred EeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCCccCCCC
Q 035862 157 YEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTG 236 (393)
Q Consensus 157 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~ 236 (393)
|||+.+++|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||++......
T Consensus 72 ~e~~~~g~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~ 146 (312)
T cd05585 72 LAFINGGELFHHLQR--EGRFDLSRARFYTAELLCALENLHKF---NVIYRDLKPENILLDYQGHIALCDFGLCKLNMKD 146 (312)
T ss_pred EcCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHeEECCCCcEEEEECcccccCccC
Confidence 999999999999853 45689999999999999999999998 9999999999999999999999999998753222
Q ss_pred CCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcCCcccccccCc
Q 035862 237 DHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKFSMMIDP 316 (393)
Q Consensus 237 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (393)
. .......||+.|+|||++.+..++.++|||||||++|+|++|..||....... ........ .
T Consensus 147 ~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~--~~~~~~~~----~--------- 209 (312)
T cd05585 147 D--DKTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNE--MYRKILQE----P--------- 209 (312)
T ss_pred C--CccccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHHH--HHHHHHcC----C---------
Confidence 2 12334679999999999999999999999999999999999999997653321 11111110 0
Q ss_pred ccccccCHHHHHHHHHHHHHhcccCCCCCC---CHHHHHHHHHHH
Q 035862 317 RLRNQYSINAARRVAKLADNCLKKNPEERP---TMNQVVESLKLA 358 (393)
Q Consensus 317 ~~~~~~~~~~~~~l~~li~~~l~~dp~~Rp---s~~~~l~~l~~~ 358 (393)
...+..++.++.+|+.+||+.||.+|| ++.+++.|.|..
T Consensus 210 ---~~~~~~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~hp~~~ 251 (312)
T cd05585 210 ---LRFPDGFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKNHPFFS 251 (312)
T ss_pred ---CCCCCcCCHHHHHHHHHHcCCCHHHcCCCCCHHHHHcCCCcC
Confidence 011223567889999999999999997 578999987643
No 72
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=6.9e-43 Score=325.98 Aligned_cols=269 Identities=25% Similarity=0.394 Sum_probs=205.8
Q ss_pred hcCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCC-cccHHHHHHHHHHhhcCCCCccceeeeeeecCCcc
Q 035862 71 TNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG-LQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDER 149 (393)
Q Consensus 71 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 149 (393)
.++|++.++||+|+||.||+|.+..+ +..+++|.+.... ......+.+|+++++.++||||+++++++...+
T Consensus 4 ~~~y~~~~~lg~g~~g~V~~~~~~~~-----~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-- 76 (333)
T cd06650 4 DDDFEKISELGAGNGGVVFKVSHKPS-----GLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDG-- 76 (333)
T ss_pred hhhhheeccccCCCCEEEEEEEECCC-----CcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECC--
Confidence 36799999999999999999986533 3468889876542 233456889999999999999999999998766
Q ss_pred cceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccC
Q 035862 150 GIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGL 229 (393)
Q Consensus 150 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~ 229 (393)
..++||||+.+++|.+++.. ...+++..+..++.|++.||.|||+. .+++||||||+|||+++++.+||+|||+
T Consensus 77 --~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~l~~~l~~lH~~--~~ivH~dlkp~Nili~~~~~~kL~Dfg~ 150 (333)
T cd06650 77 --EISICMEHMDGGSLDQVLKK--AGRIPEQILGKVSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGV 150 (333)
T ss_pred --EEEEEEecCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhc--CCEEecCCChhhEEEcCCCCEEEeeCCc
Confidence 56999999999999999853 34588999999999999999999973 2799999999999999999999999999
Q ss_pred CccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcCCcc
Q 035862 230 AREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKK 309 (393)
Q Consensus 230 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 309 (393)
+...... ......|+..|+|||++.+..++.++|||||||++|+|++|+.||............. .+..+..
T Consensus 151 ~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~----~~~~~~~ 222 (333)
T cd06650 151 SGQLIDS----MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFG----CPVEGDP 222 (333)
T ss_pred chhhhhh----ccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhc----CcccCCc
Confidence 8754322 1234578999999999998899999999999999999999999997544322111110 0000000
Q ss_pred ccc--------------------------------ccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 035862 310 FSM--------------------------------MIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKL 357 (393)
Q Consensus 310 ~~~--------------------------------~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~ 357 (393)
... ..............+.++.+|+.+||++||++|||+.+++.|.+.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h~~~ 302 (333)
T cd06650 223 AESETSPRPRPPGRPLSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMVHAFI 302 (333)
T ss_pred cccccCcccCCccchhhhhcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhhCHHH
Confidence 000 000000000001245778999999999999999999999999887
Q ss_pred HHh
Q 035862 358 AVQ 360 (393)
Q Consensus 358 ~~~ 360 (393)
...
T Consensus 303 ~~~ 305 (333)
T cd06650 303 KRS 305 (333)
T ss_pred hcC
Confidence 544
No 73
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=1.9e-43 Score=329.05 Aligned_cols=246 Identities=26% Similarity=0.358 Sum_probs=197.5
Q ss_pred ceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCC---cccHHHHHHHHHHhhcCCCCccceeeeeeecCCcccceEE
Q 035862 78 LKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG---LQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQRL 154 (393)
Q Consensus 78 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 154 (393)
+.||+|+||.||++.+..+ +..||+|++.... ......+.+|+.+++.++||||+++++++...+ ..+
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~-----~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~----~~~ 71 (328)
T cd05593 1 KLLGKGTFGKVILVREKAS-----GKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKD----RLC 71 (328)
T ss_pred CeeeeCCCEEEEEEEECCC-----CCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCC----EEE
Confidence 3699999999999986543 3469999987542 223456778999999999999999999988776 569
Q ss_pred EEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCCccCC
Q 035862 155 LVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGP 234 (393)
Q Consensus 155 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~ 234 (393)
+||||+++++|.+++. ....+++..++.++.||+.||+|||++ +|+||||||+|||++.++.+||+|||++....
T Consensus 72 lv~Ey~~~g~L~~~l~--~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~ 146 (328)
T cd05593 72 FVMEYVNGGELFFHLS--RERVFSEDRTRFYGAEIVSALDYLHSG---KIVYRDLKLENLMLDKDGHIKITDFGLCKEGI 146 (328)
T ss_pred EEEeCCCCCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeEECCCCcEEEecCcCCccCC
Confidence 9999999999998884 345689999999999999999999998 99999999999999999999999999987532
Q ss_pred CCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcCCccccccc
Q 035862 235 TGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKFSMMI 314 (393)
Q Consensus 235 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (393)
... .......||+.|+|||++.+..++.++|||||||++|+|++|+.||......... .... ...
T Consensus 147 ~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~---~~~~---~~~------- 211 (328)
T cd05593 147 TDA--ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLF---ELIL---MED------- 211 (328)
T ss_pred Ccc--cccccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHHHH---HHhc---cCC-------
Confidence 211 1223457999999999999999999999999999999999999999765432111 1110 000
Q ss_pred CcccccccCHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHHHHH
Q 035862 315 DPRLRNQYSINAARRVAKLADNCLKKNPEERP-----TMNQVVESLKL 357 (393)
Q Consensus 315 ~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rp-----s~~~~l~~l~~ 357 (393)
...+..++.++.+|+.+||+.||++|+ ++.++++|.|.
T Consensus 212 -----~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~ 254 (328)
T cd05593 212 -----IKFPRTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRHSFF 254 (328)
T ss_pred -----ccCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcCCCc
Confidence 011223467889999999999999997 89999998654
No 74
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=2.1e-43 Score=328.17 Aligned_cols=246 Identities=26% Similarity=0.348 Sum_probs=197.2
Q ss_pred ceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCC---cccHHHHHHHHHHhhcCCCCccceeeeeeecCCcccceEE
Q 035862 78 LKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG---LQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQRL 154 (393)
Q Consensus 78 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 154 (393)
+.||+|+||.||++.+..+ +..||+|.+.... ......+.+|+.+++.++||||+++++++...+ ..|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~-----~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~----~~~ 71 (323)
T cd05595 1 KLLGKGTFGKVILVREKAT-----GRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHD----RLC 71 (323)
T ss_pred CeeeeCCCEEEEEEEECCC-----CCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCC----EEE
Confidence 3699999999999986543 3469999987542 123345678999999999999999999988776 569
Q ss_pred EEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCCccCC
Q 035862 155 LVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGP 234 (393)
Q Consensus 155 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~ 234 (393)
+||||+++++|..++. ....+++..++.++.||+.||.|||++ ||+||||||+|||++.++.+||+|||++....
T Consensus 72 lv~E~~~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~ 146 (323)
T cd05595 72 FVMEYANGGELFFHLS--RERVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGI 146 (323)
T ss_pred EEEeCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEEcCCCCEEecccHHhcccc
Confidence 9999999999998884 344689999999999999999999998 99999999999999999999999999987532
Q ss_pred CCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcCCccccccc
Q 035862 235 TGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKFSMMI 314 (393)
Q Consensus 235 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (393)
.... ......|++.|+|||++.+..++.++|||||||++|+|++|+.||........... .... .
T Consensus 147 ~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~--~~~~----~------- 211 (323)
T cd05595 147 SDGA--TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFEL--ILME----E------- 211 (323)
T ss_pred CCCC--ccccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHH--HhcC----C-------
Confidence 2211 22345799999999999999999999999999999999999999976543221111 1000 0
Q ss_pred CcccccccCHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHHHHH
Q 035862 315 DPRLRNQYSINAARRVAKLADNCLKKNPEERP-----TMNQVVESLKL 357 (393)
Q Consensus 315 ~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rp-----s~~~~l~~l~~ 357 (393)
...+..++.++.+|+.+||+.||++|| ++.++++|.|.
T Consensus 212 -----~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h~~~ 254 (323)
T cd05595 212 -----IRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFF 254 (323)
T ss_pred -----CCCCCCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcCCCc
Confidence 011223467889999999999999998 89999998654
No 75
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=1.6e-42 Score=313.58 Aligned_cols=259 Identities=26% Similarity=0.410 Sum_probs=204.8
Q ss_pred cCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCc-ccHHHHHHHHHHhhcCCCCccceeeeeeecCCccc
Q 035862 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL-QGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERG 150 (393)
Q Consensus 72 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 150 (393)
++|++.+.||+|+||.||+|.+... ......||+|.+..... .....+.+|+.+++.++||||+++++++...+
T Consensus 5 ~~~~~~~~ig~G~fg~V~~~~~~~~--~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~--- 79 (266)
T cd05064 5 KSIKIERILGTGRFGELCRGCLKLP--SKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGN--- 79 (266)
T ss_pred HHeEEeeeecccCCCeEEEEEEecC--CCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCC---
Confidence 4689999999999999999986532 23556899999876532 23456789999999999999999999988765
Q ss_pred ceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCC
Q 035862 151 IQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLA 230 (393)
Q Consensus 151 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a 230 (393)
..++||||+++++|.+++... ...+++..++.++.|++.||+|||+. +++||||||+|||++.++.++++|||.+
T Consensus 80 -~~~lv~e~~~~~~L~~~l~~~-~~~l~~~~~~~~~~~i~~al~~lH~~---~iiH~dikp~nili~~~~~~~l~dfg~~ 154 (266)
T cd05064 80 -TMMIVTEYMSNGALDSFLRKH-EGQLVAGQLMGMLPGLASGMKYLSEM---GYVHKGLAAHKVLVNSDLVCKISGFRRL 154 (266)
T ss_pred -CcEEEEEeCCCCcHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CEeeccccHhhEEEcCCCcEEECCCccc
Confidence 459999999999999998643 34689999999999999999999998 9999999999999999999999999987
Q ss_pred ccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHh-CCCccCCCCchhhhHHHHHHhhcCcCCcc
Q 035862 231 REGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILT-GRRVLERNRPTMEQKLLEWVKQFPADGKK 309 (393)
Q Consensus 231 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 309 (393)
........ .......++..|+|||.+.+..++.++|||||||++||+++ |..||........ ...... +
T Consensus 155 ~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~---~~~~~~----~-- 224 (266)
T cd05064 155 QEDKSEAI-YTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDV---IKAVED----G-- 224 (266)
T ss_pred ccccccch-hcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHH---HHHHHC----C--
Confidence 65322111 11112345678999999999999999999999999999875 9999976543321 111111 0
Q ss_pred cccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q 035862 310 FSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLA 358 (393)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~ 358 (393)
.....+..++..+.+++.+||+.+|.+||++.++++.|..+
T Consensus 225 --------~~~~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 225 --------FRLPAPRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred --------CCCCCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence 00111234567899999999999999999999999988654
No 76
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-43 Score=330.47 Aligned_cols=271 Identities=30% Similarity=0.481 Sum_probs=217.2
Q ss_pred HHHHhcCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCC---CcccHHHHHHHHHHhhcCCCCccceeeeee
Q 035862 67 LREATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNH---GLQGHKQWLAEVQFLGVVSHPNLVKLLGYC 143 (393)
Q Consensus 67 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~ 143 (393)
++-..++-...++||+|+||.||+|.+...+.... ..||+|..... .......+++|++++++++|||||++||+.
T Consensus 152 Wel~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~-~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa 230 (474)
T KOG0194|consen 152 WELSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKV-VPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVA 230 (474)
T ss_pred cEEeccCccccceeecccccEEEEEEEEecCCcee-eeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEE
Confidence 33344566677899999999999999875443212 22899998753 245567789999999999999999999999
Q ss_pred ecCCcccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceE
Q 035862 144 STEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPK 223 (393)
Q Consensus 144 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~k 223 (393)
..+.+. ++|||+|.||+|.++|..... .++..+...++.+.+.||+|||++ +++||||-.+|+|++.++.+|
T Consensus 231 ~~~~Pl----~ivmEl~~gGsL~~~L~k~~~-~v~~~ek~~~~~~AA~Gl~YLh~k---~~IHRDIAARNcL~~~~~~vK 302 (474)
T KOG0194|consen 231 VLEEPL----MLVMELCNGGSLDDYLKKNKK-SLPTLEKLRFCYDAARGLEYLHSK---NCIHRDIAARNCLYSKKGVVK 302 (474)
T ss_pred cCCCcc----EEEEEecCCCcHHHHHHhCCC-CCCHHHHHHHHHHHHhHHHHHHHC---CCcchhHhHHHheecCCCeEE
Confidence 888754 999999999999999965443 589999999999999999999999 999999999999999999999
Q ss_pred EeeccCCccCCCCCCccccc-cccccCCccCccccccCCCCchhhHHHHHHHHHHHHh-CCCccCCCCchhhhHHHHHHh
Q 035862 224 LSDFGLAREGPTGDHTHVST-AVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILT-GRRVLERNRPTMEQKLLEWVK 301 (393)
Q Consensus 224 l~Dfg~a~~~~~~~~~~~~~-~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ellt-g~~pf~~~~~~~~~~~~~~~~ 301 (393)
|+|||+++... ...... ...-...|+|||.+....|+.++|||||||++||+++ |..||.+....... .+.
T Consensus 303 ISDFGLs~~~~---~~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~---~kI- 375 (474)
T KOG0194|consen 303 ISDFGLSRAGS---QYVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVK---AKI- 375 (474)
T ss_pred eCccccccCCc---ceeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHHHHH---HHH-
Confidence 99999998643 111111 2245678999999999999999999999999999999 78898765443211 111
Q ss_pred hcCcCCcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhhcCC
Q 035862 302 QFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQESEQG 365 (393)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~~~~~~~~ 365 (393)
.....+...+...+.++..++.+||..+|++||++.++.+.+..+....+..
T Consensus 376 ------------~~~~~r~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~~~~ 427 (474)
T KOG0194|consen 376 ------------VKNGYRMPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKKKEAF 427 (474)
T ss_pred ------------HhcCccCCCCCCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHhccccc
Confidence 0112223333356788999999999999999999999999999998876653
No 77
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=6.1e-43 Score=315.04 Aligned_cols=255 Identities=35% Similarity=0.587 Sum_probs=199.5
Q ss_pred ccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCc-ccHHHHHHHHHHhhcCCCCccceeeeeeecCCcccceEE
Q 035862 76 RMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL-QGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQRL 154 (393)
Q Consensus 76 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 154 (393)
+.+.||.|+||.||+|.+.. ........|+||.+..... .....+.+|++.++.++||||++++|++...+. .+
T Consensus 3 ~~~~ig~G~fg~v~~~~~~~-~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~----~~ 77 (259)
T PF07714_consen 3 LIKQIGEGSFGKVYRAEWKQ-KDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEP----LF 77 (259)
T ss_dssp EEEEEEEESSEEEEEEEEES-TTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSS----EE
T ss_pred EeeEEccCCCcEEEEEEEEc-ccCCCCEEEEEEEeccccccccceeeeeccccccccccccccccccccccccc----cc
Confidence 45689999999999999874 3445678899999965432 336788999999999999999999999995553 59
Q ss_pred EEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCCccCC
Q 035862 155 LVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGP 234 (393)
Q Consensus 155 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~ 234 (393)
+||||+.+|+|.+++.......+++..++.++.|++.||.|||++ +++|+||+++||++++++.+||+|||++....
T Consensus 78 lv~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~---~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~ 154 (259)
T PF07714_consen 78 LVMEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSN---NIIHGNLSPSNILLDSNGQVKLSDFGLSRPIS 154 (259)
T ss_dssp EEEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHT---TEEEST-SGGGEEEETTTEEEEESTTTGEETT
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccc---cccccccccccccccccccccccccccccccc
Confidence 999999999999999877567799999999999999999999998 99999999999999999999999999998763
Q ss_pred CCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHh-CCCccCCCCchhhhHHHHHHhhcCcCCcccccc
Q 035862 235 TGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILT-GRRVLERNRPTMEQKLLEWVKQFPADGKKFSMM 313 (393)
Q Consensus 235 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (393)
............+...|+|||.+.+..++.++||||||+++|||++ |..||....... +......
T Consensus 155 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~---~~~~~~~----------- 220 (259)
T PF07714_consen 155 EKSKYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEE---IIEKLKQ----------- 220 (259)
T ss_dssp TSSSEEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHH---HHHHHHT-----------
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc---ccccccc-----------
Confidence 3333333344567789999999999999999999999999999999 678886653321 1111111
Q ss_pred cCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 035862 314 IDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESL 355 (393)
Q Consensus 314 ~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l 355 (393)
..+...+..++..+.+++..||..||++||++.++++.|
T Consensus 221 ---~~~~~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 221 ---GQRLPIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp ---TEETTSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred ---cccceeccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 011112223467899999999999999999999999875
No 78
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=4.3e-43 Score=333.41 Aligned_cols=256 Identities=23% Similarity=0.305 Sum_probs=200.0
Q ss_pred CCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCc---ccHHHHHHHHHHhhcCCCCccceeeeeeecCCcc
Q 035862 73 GFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL---QGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDER 149 (393)
Q Consensus 73 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 149 (393)
.|+.++.||+|+||+||+|.+..+ +..||+|++..... .....+.+|+.+++.++||||+++++++...+
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~-----~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~-- 74 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDT-----HALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKD-- 74 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCC-----CCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCC--
Confidence 588999999999999999986544 34699999875422 23345788999999999999999999998766
Q ss_pred cceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccC
Q 035862 150 GIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGL 229 (393)
Q Consensus 150 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~ 229 (393)
.+++||||+++|+|.+++.. ...+++..++.++.||+.||.|||+. ||+||||||+|||++.++.+||+|||+
T Consensus 75 --~~~lv~E~~~gg~L~~~l~~--~~~~~e~~~~~~~~qi~~aL~~LH~~---givHrDlKp~Nili~~~~~~kL~DFGl 147 (381)
T cd05626 75 --NLYFVMDYIPGGDMMSLLIR--MEVFPEVLARFYIAELTLAIESVHKM---GFIHRDIKPDNILIDLDGHIKLTDFGL 147 (381)
T ss_pred --EEEEEEecCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCcHHHEEECCCCCEEEeeCcC
Confidence 56999999999999999853 34689999999999999999999998 999999999999999999999999999
Q ss_pred CccCCCCCC---------------------------------------------ccccccccccCCccCccccccCCCCc
Q 035862 230 AREGPTGDH---------------------------------------------THVSTAVVGTYGYAAPEYIETGHLKS 264 (393)
Q Consensus 230 a~~~~~~~~---------------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~ 264 (393)
+........ .......+||+.|+|||++.+..++.
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~ 227 (381)
T cd05626 148 CTGFRWTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQ 227 (381)
T ss_pred CcccccccccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCC
Confidence 753211000 00112357999999999999889999
Q ss_pred hhhHHHHHHHHHHHHhCCCccCCCCchhhhHH-HHHHhhcCcCCcccccccCcccccccCHHHHHHHHHHHHHhc--ccC
Q 035862 265 QSDIWSFGVVLYEILTGRRVLERNRPTMEQKL-LEWVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCL--KKN 341 (393)
Q Consensus 265 ~~DiwslGvil~elltg~~pf~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l--~~d 341 (393)
++|||||||++|||++|..||........... ..+.... .......++.++.+|+.+|+ ..+
T Consensus 228 ~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~---------------~~~~~~~~s~~~~dli~~ll~~~~~ 292 (381)
T cd05626 228 LCDWWSVGVILFEMLVGQPPFLAPTPTETQLKVINWENTL---------------HIPPQVKLSPEAVDLITKLCCSAEE 292 (381)
T ss_pred ccceeehhhHHHHHHhCCCCCcCCCHHHHHHHHHcccccc---------------CCCCCCCCCHHHHHHHHHHccCccc
Confidence 99999999999999999999987654322211 1110000 00011124678889999855 455
Q ss_pred CCCCCCHHHHHHHHHH
Q 035862 342 PEERPTMNQVVESLKL 357 (393)
Q Consensus 342 p~~Rps~~~~l~~l~~ 357 (393)
+..||++.+++.|.+.
T Consensus 293 ~~~R~~~~~~l~hp~f 308 (381)
T cd05626 293 RLGRNGADDIKAHPFF 308 (381)
T ss_pred ccCCCCHHHHhcCccc
Confidence 6669999999999875
No 79
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=7.2e-43 Score=340.79 Aligned_cols=264 Identities=22% Similarity=0.273 Sum_probs=208.4
Q ss_pred HHHhcCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCC--cccHHHHHHHHHHhhcCCCCccceeeeeeec
Q 035862 68 REATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG--LQGHKQWLAEVQFLGVVSHPNLVKLLGYCST 145 (393)
Q Consensus 68 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 145 (393)
+...++|.+.+.||+|+||+||+|.+..++ ..||+|.+.... ......+.+|+.++..++|+||+++++.+..
T Consensus 28 ~~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g-----~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~ 102 (496)
T PTZ00283 28 KEQAKKYWISRVLGSGATGTVLCAKRVSDG-----EPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAK 102 (496)
T ss_pred cccCCCEEEEEEEecCCCEEEEEEEEcCCC-----CEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceec
Confidence 344578999999999999999999865443 469999987543 2334567789999999999999999887755
Q ss_pred CCcc----cceEEEEEeecCCCChHHHHhhc--CCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCC
Q 035862 146 EDER----GIQRLLVYEYMPNRSLEDRLFSR--AQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGN 219 (393)
Q Consensus 146 ~~~~----~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~ 219 (393)
.+.. ...+++||||+.+|+|.+++... ....+++..++.++.|++.||.|||+. +|+||||||+|||++.+
T Consensus 103 ~~~~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~---~IiHrDLKP~NILl~~~ 179 (496)
T PTZ00283 103 KDPRNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSK---HMIHRDIKSANILLCSN 179 (496)
T ss_pred ccccCcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEeCC
Confidence 4321 12468999999999999998643 235689999999999999999999998 99999999999999999
Q ss_pred CceEEeeccCCccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHH
Q 035862 220 FKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEW 299 (393)
Q Consensus 220 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~ 299 (393)
+.+||+|||+++...............||+.|+|||++.+..++.++|||||||++|||++|+.||........ +...
T Consensus 180 ~~vkL~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~--~~~~ 257 (496)
T PTZ00283 180 GLVKLGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENMEEV--MHKT 257 (496)
T ss_pred CCEEEEecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHH--HHHH
Confidence 99999999999765433222233456799999999999999999999999999999999999999976533211 1111
Q ss_pred HhhcCcCCcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 035862 300 VKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLK 356 (393)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~ 356 (393)
... .....+..++.++.+++.+||+.||.+||++.+++++.+
T Consensus 258 ~~~---------------~~~~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~p~ 299 (496)
T PTZ00283 258 LAG---------------RYDPLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNMPI 299 (496)
T ss_pred hcC---------------CCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhCHH
Confidence 100 001122245678999999999999999999999998854
No 80
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=6e-43 Score=330.38 Aligned_cols=256 Identities=25% Similarity=0.330 Sum_probs=198.5
Q ss_pred cCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCC---cccHHHHHHHHHHhhcCCCCccceeeeeeecCCc
Q 035862 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG---LQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDE 148 (393)
Q Consensus 72 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 148 (393)
++|++.+.||+|+||+||+|....+ +..||+|++.... ......+.+|+.++..++||||+++++.+.+.+
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~-----~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~- 74 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDT-----GHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKL- 74 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCC-----CCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCC-
Confidence 4689999999999999999986543 3469999987532 122345678999999999999999999998766
Q ss_pred ccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeecc
Q 035862 149 RGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFG 228 (393)
Q Consensus 149 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg 228 (393)
.+++||||+++|+|.+++.. ...+++..++.++.|++.||.|||++ ||+||||||+|||++.++.+||+|||
T Consensus 75 ---~~~lv~E~~~gg~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~~lH~~---givHrDlKp~NILi~~~~~vkL~DFG 146 (363)
T cd05628 75 ---NLYLIMEFLPGGDMMTLLMK--KDTLTEEETQFYIAETVLAIDSIHQL---GFIHRDIKPDNLLLDSKGHVKLSDFG 146 (363)
T ss_pred ---eEEEEEcCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCCEEEeecc
Confidence 56999999999999999853 45689999999999999999999998 99999999999999999999999999
Q ss_pred CCccCCCCCCc---------------------------------cccccccccCCccCccccccCCCCchhhHHHHHHHH
Q 035862 229 LAREGPTGDHT---------------------------------HVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVL 275 (393)
Q Consensus 229 ~a~~~~~~~~~---------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil 275 (393)
++......... ......+||+.|+|||++.+..++.++|||||||++
T Consensus 147 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil 226 (363)
T cd05628 147 LCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIM 226 (363)
T ss_pred CcccccccccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHH
Confidence 98754321100 011235799999999999999999999999999999
Q ss_pred HHHHhCCCccCCCCchhhhHH-HHHHhhcCcCCcccccccCcccccccCHHHHHHHHHHHHHhcccCCC---CCCCHHHH
Q 035862 276 YEILTGRRVLERNRPTMEQKL-LEWVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPE---ERPTMNQV 351 (393)
Q Consensus 276 ~elltg~~pf~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~---~Rps~~~~ 351 (393)
|||++|..||........... ..+..... +.+ ...++.++.+++.+|+. +|. .||++.++
T Consensus 227 ~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~---------~p~------~~~~s~~~~~li~~l~~-~~~~r~~r~~~~ei 290 (363)
T cd05628 227 YEMLIGYPPFCSETPQETYKKVMNWKETLI---------FPP------EVPISEKAKDLILRFCC-EWEHRIGAPGVEEI 290 (363)
T ss_pred HHHHhCCCCCCCCCHHHHHHHHHcCcCccc---------CCC------cCCCCHHHHHHHHHHcC-ChhhcCCCCCHHHH
Confidence 999999999976543321111 11000000 000 01245778889988665 444 56899999
Q ss_pred HHHHHH
Q 035862 352 VESLKL 357 (393)
Q Consensus 352 l~~l~~ 357 (393)
++|.|.
T Consensus 291 ~~hp~f 296 (363)
T cd05628 291 KTNPFF 296 (363)
T ss_pred hCCCCC
Confidence 999653
No 81
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=3.7e-42 Score=315.16 Aligned_cols=265 Identities=31% Similarity=0.439 Sum_probs=208.6
Q ss_pred CCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCc-ccHHHHHHHHHHhhcCCCCccceeeeeeecCCcccc
Q 035862 73 GFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL-QGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGI 151 (393)
Q Consensus 73 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 151 (393)
+|++.+.||+|+||.||+|.............+++|.+..... .....+.+|+.+++.++||||+++++.+...+.
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~--- 77 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGP--- 77 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCC---
Confidence 4788899999999999999876544444556789998875432 234567889999999999999999999887663
Q ss_pred eEEEEEeecCCCChHHHHhhcC----------------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccC
Q 035862 152 QRLLVYEYMPNRSLEDRLFSRA----------------------QPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDF 209 (393)
Q Consensus 152 ~~~lv~e~~~~~~L~~~l~~~~----------------------~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Di 209 (393)
.+++|||+.+++|.+++.... ...+++..++.++.|++.||.|||+. +++||||
T Consensus 78 -~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~ivH~di 153 (290)
T cd05045 78 -LLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEM---KLVHRDL 153 (290)
T ss_pred -cEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHC---Ceehhhh
Confidence 499999999999999885321 13478889999999999999999998 9999999
Q ss_pred CCCCeEeCCCCceEEeeccCCccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHh-CCCccCCC
Q 035862 210 KTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILT-GRRVLERN 288 (393)
Q Consensus 210 kp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ellt-g~~pf~~~ 288 (393)
||+|||+++++.+||+|||++................++..|+|||.+.+..++.++||||||+++|+|++ |..||...
T Consensus 154 kp~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~ 233 (290)
T cd05045 154 AARNVLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGI 233 (290)
T ss_pred hhheEEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCC
Confidence 99999999999999999999976433222212223345678999999988899999999999999999998 99999755
Q ss_pred CchhhhHHHHHHhhcCcCCcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhh
Q 035862 289 RPTMEQKLLEWVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQE 361 (393)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~~~~ 361 (393)
.+.. +....... .....+..++.++.+++.+||+.+|++||++.++++.|+.++..
T Consensus 234 ~~~~---~~~~~~~~--------------~~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~~~ 289 (290)
T cd05045 234 APER---LFNLLKTG--------------YRMERPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMMVK 289 (290)
T ss_pred CHHH---HHHHHhCC--------------CCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHHhc
Confidence 4322 11111110 01111223457899999999999999999999999999998753
No 82
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=2.5e-43 Score=333.32 Aligned_cols=256 Identities=25% Similarity=0.364 Sum_probs=202.2
Q ss_pred cCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCC---cccHHHHHHHHHHhhcCCCCccceeeeeeecCCc
Q 035862 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG---LQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDE 148 (393)
Q Consensus 72 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 148 (393)
++|++.+.||.|+||+||+|.+..++ ..||+|++.... ......+.+|+.++..++||||+++++++...+
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~- 74 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTG-----HIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDEN- 74 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCC-----CEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCC-
Confidence 47999999999999999999975443 469999987532 123345678999999999999999999998776
Q ss_pred ccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeecc
Q 035862 149 RGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFG 228 (393)
Q Consensus 149 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg 228 (393)
+.++||||+.+|+|.+++.. ...+++..++.++.|++.||+|||+. +|+||||||+|||++.+|.+||+|||
T Consensus 75 ---~~~lv~E~~~~g~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg 146 (364)
T cd05599 75 ---YLYLIMEYLPGGDMMTLLMK--KDTFTEEETRFYIAETILAIDSIHKL---GYIHRDIKPDNLLLDAKGHIKLSDFG 146 (364)
T ss_pred ---eEEEEECCCCCcHHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEeecc
Confidence 56999999999999999854 34689999999999999999999998 99999999999999999999999999
Q ss_pred CCccCCCCCCcc------------------------------------ccccccccCCccCccccccCCCCchhhHHHHH
Q 035862 229 LAREGPTGDHTH------------------------------------VSTAVVGTYGYAAPEYIETGHLKSQSDIWSFG 272 (393)
Q Consensus 229 ~a~~~~~~~~~~------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG 272 (393)
++.......... .....+||+.|+|||++.+..++.++||||||
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG 226 (364)
T cd05599 147 LCTGLKKSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLG 226 (364)
T ss_pred cceeccccccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecch
Confidence 986532211000 01124699999999999999999999999999
Q ss_pred HHHHHHHhCCCccCCCCchhhhH-HHHHHhhcCcCCcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCC---H
Q 035862 273 VVLYEILTGRRVLERNRPTMEQK-LLEWVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPT---M 348 (393)
Q Consensus 273 vil~elltg~~pf~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps---~ 348 (393)
|++|||++|..||.......... ...+...... .....+++++.+||.+||. +|.+|++ +
T Consensus 227 ~il~el~~G~~Pf~~~~~~~~~~~i~~~~~~~~~---------------~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~ 290 (364)
T cd05599 227 VIMYEMLVGYPPFCSDNPQETYRKIINWKETLQF---------------PDEVPLSPEAKDLIKRLCC-EAERRLGNNGV 290 (364)
T ss_pred hHHHHhhcCCCCCCCCCHHHHHHHHHcCCCccCC---------------CCCCCCCHHHHHHHHHHcc-CHhhcCCCCCH
Confidence 99999999999998665432111 1111000000 0011245788999999996 9999998 9
Q ss_pred HHHHHHHHH
Q 035862 349 NQVVESLKL 357 (393)
Q Consensus 349 ~~~l~~l~~ 357 (393)
.+++.|.|.
T Consensus 291 ~~ll~h~~~ 299 (364)
T cd05599 291 NEIKSHPFF 299 (364)
T ss_pred HHHhcCCCc
Confidence 999999764
No 83
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=3.9e-42 Score=312.95 Aligned_cols=263 Identities=26% Similarity=0.417 Sum_probs=204.4
Q ss_pred HhcCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCc-ccHHHHHHHHHHhhcCCCCccceeeeeeecCCc
Q 035862 70 ATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL-QGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDE 148 (393)
Q Consensus 70 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 148 (393)
..++|++.+.||+|+||.||+|.+...........||+|++..... .....+.+|+.+++.++||||+++++++....
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~- 82 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQ- 82 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC-
Confidence 3567999999999999999999876443344567799999865322 23455788999999999999999999987665
Q ss_pred ccceEEEEEeecCCCChHHHHhhcC--------CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCC
Q 035862 149 RGIQRLLVYEYMPNRSLEDRLFSRA--------QPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNF 220 (393)
Q Consensus 149 ~~~~~~lv~e~~~~~~L~~~l~~~~--------~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~ 220 (393)
..++||||+.+++|.+++.... ...+++..+..++.|++.||.|||+. +++|+||||+||++++++
T Consensus 83 ---~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~vH~dlkp~Nil~~~~~ 156 (277)
T cd05062 83 ---PTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDF 156 (277)
T ss_pred ---CeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCcchheEEEcCCC
Confidence 4599999999999999985422 12356788899999999999999998 999999999999999999
Q ss_pred ceEEeeccCCccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHh-CCCccCCCCchhhhHHHHH
Q 035862 221 KPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILT-GRRVLERNRPTMEQKLLEW 299 (393)
Q Consensus 221 ~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ellt-g~~pf~~~~~~~~~~~~~~ 299 (393)
.++|+|||++................++..|+|||.+.+..++.++|||||||++|||++ |..||....... ....
T Consensus 157 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~---~~~~ 233 (277)
T cd05062 157 TVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQ---VLRF 233 (277)
T ss_pred CEEECCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH---HHHH
Confidence 999999999875443332222223455778999999998899999999999999999999 788886543321 1111
Q ss_pred HhhcCcCCcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 035862 300 VKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLK 356 (393)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~ 356 (393)
...... ...+..++..+.+++.+||+.||++|||+.++++.+.
T Consensus 234 ~~~~~~--------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~ 276 (277)
T cd05062 234 VMEGGL--------------LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 276 (277)
T ss_pred HHcCCc--------------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhh
Confidence 111000 0011124567899999999999999999999998875
No 84
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=1.1e-42 Score=317.96 Aligned_cols=257 Identities=27% Similarity=0.427 Sum_probs=206.3
Q ss_pred CCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCc---ccHHHHHHHHHHhhcCCCCccceeeeeeecCCcc
Q 035862 73 GFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL---QGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDER 149 (393)
Q Consensus 73 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 149 (393)
.|++.+.||+|+||.||++.+..+ +..||+|.+..... .....+.+|+.+++.++||||+++++.+...+
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-- 73 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRAT-----GKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKD-- 73 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCC-----CceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCC--
Confidence 488899999999999999986533 34699999865322 12344678999999999999999999987766
Q ss_pred cceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccC
Q 035862 150 GIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGL 229 (393)
Q Consensus 150 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~ 229 (393)
.+++||||+.+++|.+++.......+++..+..++.|++.||.|||+. +++||||||+||++++++.++|+|||+
T Consensus 74 --~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~l~Dfg~ 148 (285)
T cd05605 74 --ALCLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRE---RIVYRDLKPENILLDDYGHIRISDLGL 148 (285)
T ss_pred --eEEEEEeccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHEEECCCCCEEEeeCCC
Confidence 569999999999999988665556789999999999999999999998 999999999999999999999999999
Q ss_pred CccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhh-HHHHHHhhcCcCCc
Q 035862 230 AREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQ-KLLEWVKQFPADGK 308 (393)
Q Consensus 230 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~-~~~~~~~~~~~~~~ 308 (393)
+....... ......|+..|+|||++.+..++.++||||+||++|+|++|..||......... .+......
T Consensus 149 ~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~------ 219 (285)
T cd05605 149 AVEIPEGE---TIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKE------ 219 (285)
T ss_pred ceecCCCC---ccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHHhhh------
Confidence 87643222 123457899999999999889999999999999999999999999764332111 11111110
Q ss_pred ccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHHHHHHH
Q 035862 309 KFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERP-----TMNQVVESLKLAV 359 (393)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rp-----s~~~~l~~l~~~~ 359 (393)
....++..++..+.+|+.+||..||.+|| ++.++++|.|...
T Consensus 220 ---------~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~ 266 (285)
T cd05605 220 ---------DQEEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAHPFFRT 266 (285)
T ss_pred ---------cccccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcCcCccC
Confidence 01112234567889999999999999999 8999999977653
No 85
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=1.8e-42 Score=318.95 Aligned_cols=265 Identities=26% Similarity=0.397 Sum_probs=209.8
Q ss_pred hcCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCC-cccHHHHHHHHHHhhcC-CCCccceeeeeeecCCc
Q 035862 71 TNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG-LQGHKQWLAEVQFLGVV-SHPNLVKLLGYCSTEDE 148 (393)
Q Consensus 71 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~ 148 (393)
.++|.+.+.||+|+||.||+|.+...........+|+|.+.... ......+.+|+.+++.+ +||||+++++++...+
T Consensus 34 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~- 112 (302)
T cd05055 34 RNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGG- 112 (302)
T ss_pred HHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCC-
Confidence 35699999999999999999986544444566789999887543 23345678899999999 7999999999987766
Q ss_pred ccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeecc
Q 035862 149 RGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFG 228 (393)
Q Consensus 149 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg 228 (393)
..++||||+.+++|.+++.......+++..+..++.|++.||.|||++ +++|+||||+|||++.++.++|+|||
T Consensus 113 ---~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~l~dfg 186 (302)
T cd05055 113 ---PILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNVLLTHGKIVKICDFG 186 (302)
T ss_pred ---ceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeehhhhccceEEEcCCCeEEECCCc
Confidence 459999999999999999655545589999999999999999999998 99999999999999999999999999
Q ss_pred CCccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHh-CCCccCCCCchhhhHHHHHHhhcCcCC
Q 035862 229 LAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILT-GRRVLERNRPTMEQKLLEWVKQFPADG 307 (393)
Q Consensus 229 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~ 307 (393)
++................++..|+|||.+.+..++.++||||+||++|+|++ |..||........ +.......
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~--~~~~~~~~---- 260 (302)
T cd05055 187 LARDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSK--FYKLIKEG---- 260 (302)
T ss_pred ccccccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHH--HHHHHHcC----
Confidence 9976543322212223356778999999998999999999999999999998 9999875543221 11111110
Q ss_pred cccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q 035862 308 KKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLA 358 (393)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~ 358 (393)
.....+...+.++.+++.+||+.+|++||++.++++.|.++
T Consensus 261 ----------~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 261 ----------YRMAQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred ----------CcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence 00011112357899999999999999999999999999864
No 86
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=4.2e-42 Score=313.24 Aligned_cols=261 Identities=28% Similarity=0.462 Sum_probs=207.1
Q ss_pred cCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcccHHHHHHHHHHhhcCCCCccceeeeeeecCCcccc
Q 035862 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGI 151 (393)
Q Consensus 72 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 151 (393)
.+|....+||+|+||.||++.............+++|.+..........+.+|+++++.++|+||+++++++...+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~---- 80 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGR---- 80 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCC----
Confidence 4688889999999999999976544444566789999987665555667889999999999999999999988766
Q ss_pred eEEEEEeecCCCChHHHHhhcCC-------------CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCC
Q 035862 152 QRLLVYEYMPNRSLEDRLFSRAQ-------------PTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDG 218 (393)
Q Consensus 152 ~~~lv~e~~~~~~L~~~l~~~~~-------------~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~ 218 (393)
..+++|||+.+++|.+++..... ..+++..++.++.|++.|++|||+. +++||||||+|||+++
T Consensus 81 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~nil~~~ 157 (280)
T cd05092 81 PLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASL---HFVHRDLATRNCLVGQ 157 (280)
T ss_pred ceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHC---CeecccccHhhEEEcC
Confidence 45999999999999999864321 3578899999999999999999998 9999999999999999
Q ss_pred CCceEEeeccCCccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHh-CCCccCCCCchhhhHHH
Q 035862 219 NFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILT-GRRVLERNRPTMEQKLL 297 (393)
Q Consensus 219 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ellt-g~~pf~~~~~~~~~~~~ 297 (393)
++.+||+|||++................+++.|+|||.+.+..++.++|||||||++|+|++ |.+||.........
T Consensus 158 ~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~--- 234 (280)
T cd05092 158 GLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAI--- 234 (280)
T ss_pred CCCEEECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHHH---
Confidence 99999999999875433222222233445678999999999999999999999999999998 89998654332111
Q ss_pred HHHhhcCcCCcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 035862 298 EWVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLK 356 (393)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~ 356 (393)
..... +. ....+..++..+.+++.+||+.||.+||++.++++.|.
T Consensus 235 ~~~~~----~~----------~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~ 279 (280)
T cd05092 235 ECITQ----GR----------ELERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQ 279 (280)
T ss_pred HHHHc----Cc----------cCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHh
Confidence 11100 00 00111234577899999999999999999999998875
No 87
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=6.7e-43 Score=326.28 Aligned_cols=258 Identities=24% Similarity=0.344 Sum_probs=201.4
Q ss_pred CCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCC----cccHHHHHHHHHHhhcCC-CCccceeeeeeecCC
Q 035862 73 GFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG----LQGHKQWLAEVQFLGVVS-HPNLVKLLGYCSTED 147 (393)
Q Consensus 73 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~ 147 (393)
+|++.+.||+|+||.||+++... ....+..||+|++.+.. ......+..|+.++..++ ||||+++++++...+
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~--~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~ 78 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVT--GHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEA 78 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcc--cCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCC
Confidence 48899999999999999998642 22355679999986532 122345678999999995 999999999887766
Q ss_pred cccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeec
Q 035862 148 ERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDF 227 (393)
Q Consensus 148 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Df 227 (393)
..++||||+.+++|.+++.. ...+++..++.++.||+.||.|||+. +|+||||||+|||++.++.+||+||
T Consensus 79 ----~~~lv~e~~~~g~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nili~~~~~~kl~Df 149 (332)
T cd05614 79 ----KLHLILDYVSGGEMFTHLYQ--RDNFSEDEVRFYSGEIILALEHLHKL---GIVYRDIKLENILLDSEGHVVLTDF 149 (332)
T ss_pred ----EEEEEEeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHeEECCCCCEEEeeC
Confidence 56999999999999999854 34689999999999999999999998 9999999999999999999999999
Q ss_pred cCCccCCCCCCccccccccccCCccCccccccC-CCCchhhHHHHHHHHHHHHhCCCccCCCCchhh-hHHHHHHhhcCc
Q 035862 228 GLAREGPTGDHTHVSTAVVGTYGYAAPEYIETG-HLKSQSDIWSFGVVLYEILTGRRVLERNRPTME-QKLLEWVKQFPA 305 (393)
Q Consensus 228 g~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslGvil~elltg~~pf~~~~~~~~-~~~~~~~~~~~~ 305 (393)
|++......... ......||+.|+|||++.+. .++.++|||||||++|||++|..||........ ..+.......
T Consensus 150 G~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~-- 226 (332)
T cd05614 150 GLSKEFLSEEKE-RTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILKC-- 226 (332)
T ss_pred cCCccccccCCC-ccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHhcC--
Confidence 999764332221 22345799999999999765 478899999999999999999999964332211 1111111100
Q ss_pred CCcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHHHHH
Q 035862 306 DGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERP-----TMNQVVESLKL 357 (393)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rp-----s~~~~l~~l~~ 357 (393)
++ ..+..++..+.+++.+||+.||++|| +++++++|.|.
T Consensus 227 ---------~~----~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~ 270 (332)
T cd05614 227 ---------DP----PFPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEHPFF 270 (332)
T ss_pred ---------CC----CCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcCCCc
Confidence 01 11223457789999999999999999 88999999763
No 88
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=9.5e-43 Score=324.06 Aligned_cols=248 Identities=26% Similarity=0.404 Sum_probs=196.1
Q ss_pred CcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCC---cccHHHHHHHHHHh---hcCCCCccceeeeeeecCC
Q 035862 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG---LQGHKQWLAEVQFL---GVVSHPNLVKLLGYCSTED 147 (393)
Q Consensus 74 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l---~~l~h~niv~~~~~~~~~~ 147 (393)
|++.+.||+|+||.||+|.+..++ ..||+|.+.+.. ......+.+|+.++ +.++||||+++++++...+
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~-----~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~ 75 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTG-----ELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTED 75 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCC-----CEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCC
Confidence 678899999999999999875443 469999987532 12234455665554 5678999999999998766
Q ss_pred cccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeec
Q 035862 148 ERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDF 227 (393)
Q Consensus 148 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Df 227 (393)
..|+||||+++++|..++. ...+++..++.++.||+.||.|||+. |++||||||+||+++.++.+||+||
T Consensus 76 ----~~~lv~E~~~~~~L~~~~~---~~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrdlkp~Nill~~~~~~kL~Df 145 (324)
T cd05589 76 ----HVCFVMEYAAGGDLMMHIH---TDVFSEPRAVFYAACVVLGLQYLHEN---KIVYRDLKLDNLLLDTEGFVKIADF 145 (324)
T ss_pred ----EEEEEEcCCCCCcHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCcEEeCcc
Confidence 5699999999999998873 24589999999999999999999998 9999999999999999999999999
Q ss_pred cCCccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcCC
Q 035862 228 GLAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADG 307 (393)
Q Consensus 228 g~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 307 (393)
|++....... .......|++.|+|||.+.+..++.++|||||||++|+|++|..||.......... ......
T Consensus 146 g~~~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~~--~i~~~~---- 217 (324)
T cd05589 146 GLCKEGMGFG--DRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFD--SIVNDE---- 217 (324)
T ss_pred cCCccCCCCC--CcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHHH--HHHhCC----
Confidence 9987532221 12345679999999999999999999999999999999999999997654322111 111100
Q ss_pred cccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHHHH
Q 035862 308 KKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERP-----TMNQVVESLK 356 (393)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rp-----s~~~~l~~l~ 356 (393)
...+..++..+.+++.+||+.||.+|| ++.++++|.+
T Consensus 218 ------------~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~~~ 259 (324)
T cd05589 218 ------------VRYPRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQPF 259 (324)
T ss_pred ------------CCCCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhCCC
Confidence 011223467789999999999999999 6899999865
No 89
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=6.6e-45 Score=302.91 Aligned_cols=256 Identities=23% Similarity=0.349 Sum_probs=204.4
Q ss_pred hcCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCC--CcccHHHHHHHHHHhhcCCCCccceeeeeeecCCc
Q 035862 71 TNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNH--GLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDE 148 (393)
Q Consensus 71 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 148 (393)
.+.|++...||+|.|+.||++....++.+ +++|.+... .....+.+.+|++|-+.++||||+++.+...++.
T Consensus 10 ~d~y~l~e~igkG~FSvVrRc~~~~tg~~-----fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~- 83 (355)
T KOG0033|consen 10 SDNYDVKEELGKGAFSVVRRCVHKTTGLE-----FAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEES- 83 (355)
T ss_pred chhhhHHHHHccCchHHHHHHHhccchHH-----HHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccc-
Confidence 45688888999999999999987655554 666665432 1124566788999999999999999999887766
Q ss_pred ccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCC---CceEEe
Q 035862 149 RGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGN---FKPKLS 225 (393)
Q Consensus 149 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~---~~~kl~ 225 (393)
+.|+|+|++.|++|..-|..+ ..+++..+...++||++||.|+|.+ +|||||+||+|+++... .-+||+
T Consensus 84 ---~~ylvFe~m~G~dl~~eIV~R--~~ySEa~aSH~~rQiLeal~yCH~n---~IvHRDvkP~nllLASK~~~A~vKL~ 155 (355)
T KOG0033|consen 84 ---FHYLVFDLVTGGELFEDIVAR--EFYSEADASHCIQQILEALAYCHSN---GIVHRDLKPENLLLASKAKGAAVKLA 155 (355)
T ss_pred ---eeEEEEecccchHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeeeeccCCCceeec
Confidence 669999999999998777444 4568888999999999999999999 99999999999999543 349999
Q ss_pred eccCCccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhh-cC
Q 035862 226 DFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQ-FP 304 (393)
Q Consensus 226 Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~-~~ 304 (393)
|||+|.....+ ......+|||.|||||++...+|+-.+|||+.||+||-|+.|++||.+.+... .+...... +.
T Consensus 156 ~FGvAi~l~~g---~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~r--lye~I~~g~yd 230 (355)
T KOG0033|consen 156 DFGLAIEVNDG---EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHR--LYEQIKAGAYD 230 (355)
T ss_pred ccceEEEeCCc---cccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHH--HHHHHhccccC
Confidence 99999877622 24456799999999999999999999999999999999999999998743321 11111111 11
Q ss_pred cCCcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q 035862 305 ADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLA 358 (393)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~ 358 (393)
.++ ..=..+++++.+|+++||..||.+|.|+.|.++|.|..
T Consensus 231 ~~~-------------~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~HpWi~ 271 (355)
T KOG0033|consen 231 YPS-------------PEWDTVTPEAKSLIRRMLTVNPKKRITADEALKHPWIC 271 (355)
T ss_pred CCC-------------cccCcCCHHHHHHHHHHhccChhhhccHHHHhCCchhc
Confidence 111 11124678899999999999999999999999999854
No 90
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=9.1e-43 Score=324.18 Aligned_cols=250 Identities=26% Similarity=0.394 Sum_probs=198.2
Q ss_pred CCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCC---cccHHHHHHHHHHhhcCCCC-ccceeeeeeecCCc
Q 035862 73 GFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG---LQGHKQWLAEVQFLGVVSHP-NLVKLLGYCSTEDE 148 (393)
Q Consensus 73 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~-niv~~~~~~~~~~~ 148 (393)
+|++++.||+|+||.||+|.+..+ +..||+|++.+.. ......+..|..++..++|+ +|+.+++++...+
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~-----~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~- 74 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGT-----DELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMD- 74 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCC-----CCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCC-
Confidence 488999999999999999986543 3469999987532 23345677899999999765 5788888887766
Q ss_pred ccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeecc
Q 035862 149 RGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFG 228 (393)
Q Consensus 149 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg 228 (393)
.+|+||||+++++|.+++.. ...+++..++.++.||+.||.|||+. ||+||||||+|||++.++.+||+|||
T Consensus 75 ---~~~lv~E~~~~g~L~~~~~~--~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg 146 (324)
T cd05587 75 ---RLYFVMEYVNGGDLMYHIQQ--VGKFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDAEGHIKIADFG 146 (324)
T ss_pred ---EEEEEEcCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEEcCCCCEEEeecC
Confidence 56999999999999998843 34688999999999999999999998 99999999999999999999999999
Q ss_pred CCccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcCCc
Q 035862 229 LAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGK 308 (393)
Q Consensus 229 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 308 (393)
++........ ......||+.|+|||++.+..++.++|||||||++|+|++|+.||........ .......
T Consensus 147 ~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~---~~~i~~~----- 216 (324)
T cd05587 147 MCKENIFGGK--TTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDEL---FQSIMEH----- 216 (324)
T ss_pred cceecCCCCC--ceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHH---HHHHHcC-----
Confidence 9865322211 22345799999999999999999999999999999999999999976543211 1111110
Q ss_pred ccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCH-----HHHHHHHH
Q 035862 309 KFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTM-----NQVVESLK 356 (393)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~-----~~~l~~l~ 356 (393)
....+..++.++.+++.+||..||.+|++. .++++|.+
T Consensus 217 ----------~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~hp~ 259 (324)
T cd05587 217 ----------NVSYPKSLSKEAVSICKGLLTKHPAKRLGCGPTGERDIREHAF 259 (324)
T ss_pred ----------CCCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCC
Confidence 001122345788999999999999999976 78888754
No 91
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5e-43 Score=318.89 Aligned_cols=256 Identities=23% Similarity=0.382 Sum_probs=215.7
Q ss_pred cCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCccc--HHHHHHHHHHhhcCCCCccceeeeeeecCCcc
Q 035862 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQG--HKQWLAEVQFLGVVSHPNLVKLLGYCSTEDER 149 (393)
Q Consensus 72 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 149 (393)
+-|...+.||+|.|+.|-+|++.-++.+ ||||++.+..... ...+++|++-|+.++|||||++|++..+..
T Consensus 18 GLYDLekTlG~GHFAVVKLArHVFTGek-----VAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQT-- 90 (864)
T KOG4717|consen 18 GLYDLEKTLGRGHFAVVKLARHVFTGEK-----VAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQT-- 90 (864)
T ss_pred eeehhhhhhcCCceehhhhhhhhcccce-----eEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccc--
Confidence 3477778899999999999987766654 9999998875443 356889999999999999999999887666
Q ss_pred cceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeC-CCCceEEeecc
Q 035862 150 GIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLD-GNFKPKLSDFG 228 (393)
Q Consensus 150 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~-~~~~~kl~Dfg 228 (393)
.+|||+|.-++|+|.+||.... .++.+..+.+++.||+.|+.|+|+. .+|||||||+|+.+- .-|-|||+|||
T Consensus 91 --KlyLiLELGD~GDl~DyImKHe-~Gl~E~La~kYF~QI~~AI~YCHqL---HVVHRDLKPENVVFFEKlGlVKLTDFG 164 (864)
T KOG4717|consen 91 --KLYLILELGDGGDLFDYIMKHE-EGLNEDLAKKYFAQIVHAISYCHQL---HVVHRDLKPENVVFFEKLGLVKLTDFG 164 (864)
T ss_pred --eEEEEEEecCCchHHHHHHhhh-ccccHHHHHHHHHHHHHHHHHHhhh---hhhcccCCcceeEEeeecCceEeeecc
Confidence 6799999999999999997655 4589999999999999999999998 999999999999875 45899999999
Q ss_pred CCccCCCCCCccccccccccCCccCccccccCCCC-chhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcCC
Q 035862 229 LAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLK-SQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADG 307 (393)
Q Consensus 229 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 307 (393)
++..+..+.. .+..+|+..|-|||++.+..|+ +++||||||||||.|.+|++||+...+.....++
T Consensus 165 FSNkf~PG~k---L~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLTmI---------- 231 (864)
T KOG4717|consen 165 FSNKFQPGKK---LTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLTMI---------- 231 (864)
T ss_pred ccccCCCcch---hhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhhhhhh----------
Confidence 9987665543 3567999999999999999997 5799999999999999999999876654332221
Q ss_pred cccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhh
Q 035862 308 KKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQE 361 (393)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~~~~ 361 (393)
+| ..-..+..++.++.+||..||..||++|.+.++|..+.|..-.+
T Consensus 232 ------mD--CKYtvPshvS~eCrdLI~sMLvRdPkkRAslEeI~s~~Wlq~~D 277 (864)
T KOG4717|consen 232 ------MD--CKYTVPSHVSKECRDLIQSMLVRDPKKRASLEEIVSTSWLQAGD 277 (864)
T ss_pred ------hc--ccccCchhhhHHHHHHHHHHHhcCchhhccHHHHhccccccCCC
Confidence 11 12234567899999999999999999999999999998876443
No 92
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=3e-42 Score=316.19 Aligned_cols=265 Identities=31% Similarity=0.450 Sum_probs=209.5
Q ss_pred hcCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCC-cccHHHHHHHHHHhhcC-CCCccceeeeeeecCCc
Q 035862 71 TNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG-LQGHKQWLAEVQFLGVV-SHPNLVKLLGYCSTEDE 148 (393)
Q Consensus 71 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~ 148 (393)
.++|++.+.||+|+||.||++.............+++|.+.... ......+.+|+.++..+ +|+||+++++++...+
T Consensus 11 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~- 89 (293)
T cd05053 11 RDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEG- 89 (293)
T ss_pred HhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCC-
Confidence 35689999999999999999988755544566789999987542 22335578899999999 7999999999987765
Q ss_pred ccceEEEEEeecCCCChHHHHhhc--------------CCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCe
Q 035862 149 RGIQRLLVYEYMPNRSLEDRLFSR--------------AQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNV 214 (393)
Q Consensus 149 ~~~~~~lv~e~~~~~~L~~~l~~~--------------~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NI 214 (393)
..+++|||+.+++|.+++... ....+++..++.++.|++.||.|||+. +|+||||||+||
T Consensus 90 ---~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~Ni 163 (293)
T cd05053 90 ---PLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASK---KCIHRDLAARNV 163 (293)
T ss_pred ---CeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHC---CccccccceeeE
Confidence 459999999999999998542 234688999999999999999999998 999999999999
Q ss_pred EeCCCCceEEeeccCCccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHh-CCCccCCCCchhh
Q 035862 215 LLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILT-GRRVLERNRPTME 293 (393)
Q Consensus 215 ll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ellt-g~~pf~~~~~~~~ 293 (393)
++++++.+||+|||++................++..|+|||++.+..++.++|||||||++|||++ |..||........
T Consensus 164 l~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~ 243 (293)
T cd05053 164 LVTEDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEEL 243 (293)
T ss_pred EEcCCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHHHH
Confidence 999999999999999986544332222223345678999999988899999999999999999997 9999875433221
Q ss_pred hHHHHHHhhcCcCCcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHH
Q 035862 294 QKLLEWVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAV 359 (393)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~~ 359 (393)
.. ..... .....+..++..+.+|+.+||..||++|||+.++++.|..+.
T Consensus 244 ~~---~~~~~--------------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~ 292 (293)
T cd05053 244 FK---LLKEG--------------YRMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML 292 (293)
T ss_pred HH---HHHcC--------------CcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence 11 11110 000112234577899999999999999999999999998765
No 93
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=5.1e-43 Score=332.59 Aligned_cols=256 Identities=22% Similarity=0.299 Sum_probs=199.5
Q ss_pred cCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCC---cccHHHHHHHHHHhhcCCCCccceeeeeeecCCc
Q 035862 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG---LQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDE 148 (393)
Q Consensus 72 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 148 (393)
++|.+++.||.|+||.||+|....+ +..||+|++.... ......+.+|+++++.++||||+++++++...+
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~-----~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~- 74 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDT-----GKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQ- 74 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCC-----CCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-
Confidence 4689999999999999999986543 3469999986532 123455778999999999999999999998766
Q ss_pred ccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeecc
Q 035862 149 RGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFG 228 (393)
Q Consensus 149 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg 228 (393)
+.|+||||+++++|.+++.. ...+++..++.++.|++.||+|||+. ||+||||||+|||++.++.+||+|||
T Consensus 75 ---~~~lv~E~~~gg~L~~~l~~--~~~~~~~~~~~~~~ql~~aL~~LH~~---givHrDlkp~NIll~~~~~~kl~DfG 146 (377)
T cd05629 75 ---YLYLIMEFLPGGDLMTMLIK--YDTFSEDVTRFYMAECVLAIEAVHKL---GFIHRDIKPDNILIDRGGHIKLSDFG 146 (377)
T ss_pred ---eeEEEEeCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEEeecc
Confidence 56999999999999999853 45688999999999999999999998 99999999999999999999999999
Q ss_pred CCccCCCCCCc---------------------------------------------cccccccccCCccCccccccCCCC
Q 035862 229 LAREGPTGDHT---------------------------------------------HVSTAVVGTYGYAAPEYIETGHLK 263 (393)
Q Consensus 229 ~a~~~~~~~~~---------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~ 263 (393)
++......... ......+||+.|+|||++.+..++
T Consensus 147 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~ 226 (377)
T cd05629 147 LSTGFHKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYG 226 (377)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCC
Confidence 98632110000 000124699999999999999999
Q ss_pred chhhHHHHHHHHHHHHhCCCccCCCCchhhhH-HHHHHhhcCcCCcccccccCcccccccCHHHHHHHHHHHHHhcccCC
Q 035862 264 SQSDIWSFGVVLYEILTGRRVLERNRPTMEQK-LLEWVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNP 342 (393)
Q Consensus 264 ~~~DiwslGvil~elltg~~pf~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp 342 (393)
.++|||||||++|||++|..||.......... ...+...... .....++.++.+|+.+||. +|
T Consensus 227 ~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~---------------p~~~~~s~~~~dli~~lL~-~~ 290 (377)
T cd05629 227 QECDWWSLGAIMFECLIGWPPFCSENSHETYRKIINWRETLYF---------------PDDIHLSVEAEDLIRRLIT-NA 290 (377)
T ss_pred CceeeEecchhhhhhhcCCCCCCCCCHHHHHHHHHccCCccCC---------------CCCCCCCHHHHHHHHHHhc-CH
Confidence 99999999999999999999997654422111 1111000000 0011245788999999997 77
Q ss_pred CCC---CCHHHHHHHHHH
Q 035862 343 EER---PTMNQVVESLKL 357 (393)
Q Consensus 343 ~~R---ps~~~~l~~l~~ 357 (393)
.+| +++.+++.|.|.
T Consensus 291 ~~r~~r~~~~~~l~hp~~ 308 (377)
T cd05629 291 ENRLGRGGAHEIKSHPFF 308 (377)
T ss_pred hhcCCCCCHHHHhcCCCc
Confidence 765 599999999864
No 94
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=8.9e-43 Score=324.03 Aligned_cols=249 Identities=26% Similarity=0.357 Sum_probs=198.0
Q ss_pred ceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCC----cccHHHHHHHHHHhhcCCCCccceeeeeeecCCcccceE
Q 035862 78 LKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG----LQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQR 153 (393)
Q Consensus 78 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 153 (393)
+.||+|+||.||+++.... ...+..||+|.+.... ......+.+|+.+++.++||||+++++++...+ ..
T Consensus 2 ~~lg~G~~g~V~~~~~~~~--~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~----~~ 75 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTG--ADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGG----KL 75 (323)
T ss_pred ceeeecCCeEEEEEEEccc--CCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCC----eE
Confidence 5799999999999986422 2355679999987532 122345678999999999999999999998766 56
Q ss_pred EEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCCccC
Q 035862 154 LLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREG 233 (393)
Q Consensus 154 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~ 233 (393)
++||||+.+++|.+++.. ...+++..+..++.|++.||.|||++ +|+||||||+|||++.++.+||+|||++...
T Consensus 76 ~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 150 (323)
T cd05584 76 YLILEYLSGGELFMHLER--EGIFMEDTACFYLSEISLALEHLHQQ---GIIYRDLKPENILLDAQGHVKLTDFGLCKES 150 (323)
T ss_pred EEEEeCCCCchHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEeeCcCCeec
Confidence 999999999999998843 45678889999999999999999998 9999999999999999999999999998753
Q ss_pred CCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcCCcccccc
Q 035862 234 PTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKFSMM 313 (393)
Q Consensus 234 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (393)
..... ......|++.|+|||++.+..++.++|||||||++|||++|..||........ ....... .
T Consensus 151 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~--~~~~~~~----~------ 216 (323)
T cd05584 151 IHEGT--VTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKT--IDKILKG----K------ 216 (323)
T ss_pred ccCCC--cccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHHH--HHHHHcC----C------
Confidence 22211 22345799999999999988899999999999999999999999976543211 1111100 0
Q ss_pred cCcccccccCHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHHHHH
Q 035862 314 IDPRLRNQYSINAARRVAKLADNCLKKNPEERP-----TMNQVVESLKL 357 (393)
Q Consensus 314 ~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rp-----s~~~~l~~l~~ 357 (393)
...+..++..+.+|+.+||+.||++|| ++.++++|.|.
T Consensus 217 ------~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h~~~ 259 (323)
T cd05584 217 ------LNLPPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSHPFF 259 (323)
T ss_pred ------CCCCCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcCCCc
Confidence 011223457789999999999999999 89999998763
No 95
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=5.7e-42 Score=309.43 Aligned_cols=256 Identities=27% Similarity=0.439 Sum_probs=205.1
Q ss_pred cCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcccHHHHHHHHHHhhcCCCCccceeeeeeecCCcccc
Q 035862 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGI 151 (393)
Q Consensus 72 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 151 (393)
.+|.+.+.||+|+||.||+|.+...+ ..|++|.+.... .....+.+|+.+++.++||||+++++++...+
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~-----~~~~~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~---- 75 (263)
T cd05052 6 TDITMKHKLGGGQYGEVYEGVWKKYS-----LTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP---- 75 (263)
T ss_pred HHeEEeeecCCcccceEEEEEEecCC-----ceEEEEEecCCc-hHHHHHHHHHHHHHhCCCCChhheEEEEcCCC----
Confidence 35888899999999999999976433 359999887543 34567889999999999999999999988766
Q ss_pred eEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCCc
Q 035862 152 QRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAR 231 (393)
Q Consensus 152 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~ 231 (393)
..+++|||+.+++|.+++.......+++..++.++.|++.||+|||+. +++||||||+||++++++.+||+|||++.
T Consensus 76 ~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~df~~~~ 152 (263)
T cd05052 76 PFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSR 152 (263)
T ss_pred CcEEEEEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCcEEeCCCcccc
Confidence 458999999999999999765556789999999999999999999998 99999999999999999999999999997
Q ss_pred cCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHh-CCCccCCCCchhhhHHHHHHhhcCcCCccc
Q 035862 232 EGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILT-GRRVLERNRPTMEQKLLEWVKQFPADGKKF 310 (393)
Q Consensus 232 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (393)
........ ......++..|+|||.+.+..++.++|||||||++|||++ |..||........ .......
T Consensus 153 ~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~---~~~~~~~------- 221 (263)
T cd05052 153 LMTGDTYT-AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV---YELLEKG------- 221 (263)
T ss_pred ccccceee-ccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHH---HHHHHCC-------
Confidence 65432211 1112234567999999998999999999999999999998 9999876433211 1111110
Q ss_pred ccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q 035862 311 SMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLA 358 (393)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~ 358 (393)
.....+..++.++.+++.+||+.+|++||++.++++.|+.+
T Consensus 222 -------~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 222 -------YRMERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred -------CCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence 01111223457899999999999999999999999998765
No 96
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=2.7e-42 Score=314.93 Aligned_cols=262 Identities=26% Similarity=0.420 Sum_probs=207.1
Q ss_pred cCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcc-cHHHHHHHHHHhhcCCCCccceeeeeeecCCccc
Q 035862 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQ-GHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERG 150 (393)
Q Consensus 72 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 150 (393)
.+|++.+.||+|+||.||+|.+..+........||+|.+...... ....+.+|+.++..++||||+++++++...+
T Consensus 5 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~--- 81 (283)
T cd05091 5 STVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQ--- 81 (283)
T ss_pred HHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCC---
Confidence 357788899999999999998765544455678999999755322 2355778999999999999999999998776
Q ss_pred ceEEEEEeecCCCChHHHHhhcC--------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEe
Q 035862 151 IQRLLVYEYMPNRSLEDRLFSRA--------------QPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLL 216 (393)
Q Consensus 151 ~~~~lv~e~~~~~~L~~~l~~~~--------------~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll 216 (393)
..++++||+.+++|.+++.... ...+++..++.++.|++.||.|||+. |++||||||+||++
T Consensus 82 -~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~---gi~H~dlkp~Nil~ 157 (283)
T cd05091 82 -PLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSH---HVVHKDLATRNVLV 157 (283)
T ss_pred -ceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHc---CccccccchhheEe
Confidence 4589999999999999984321 23478888999999999999999998 99999999999999
Q ss_pred CCCCceEEeeccCCccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHh-CCCccCCCCchhhhH
Q 035862 217 DGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILT-GRRVLERNRPTMEQK 295 (393)
Q Consensus 217 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ellt-g~~pf~~~~~~~~~~ 295 (393)
++++.+||+|||+++...............+++.|+|||.+.+..++.++|||||||++|||++ |..||...... .
T Consensus 158 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~---~ 234 (283)
T cd05091 158 FDKLNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQ---D 234 (283)
T ss_pred cCCCceEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHH---H
Confidence 9999999999999886543332222334456788999999988889999999999999999998 88888654332 1
Q ss_pred HHHHHhhcCcCCcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 035862 296 LLEWVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKL 357 (393)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~ 357 (393)
.......... ...+..++..+.+|+.+||+.+|.+||++.+++..|..
T Consensus 235 ~~~~i~~~~~--------------~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 235 VIEMIRNRQV--------------LPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred HHHHHHcCCc--------------CCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence 2222211110 11222456789999999999999999999999998864
No 97
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=2.4e-42 Score=323.81 Aligned_cols=268 Identities=27% Similarity=0.398 Sum_probs=207.9
Q ss_pred cCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCc-ccHHHHHHHHHHhhcC-CCCccceeeeeeecCCcc
Q 035862 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL-QGHKQWLAEVQFLGVV-SHPNLVKLLGYCSTEDER 149 (393)
Q Consensus 72 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~ 149 (393)
++|++.+.||+|+||.||+|.+...+.......||+|.+..... .....+.+|+.++..+ +||||+++++++...+.
T Consensus 7 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~- 85 (343)
T cd05103 7 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG- 85 (343)
T ss_pred hHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCC-
Confidence 57999999999999999999876555555677899999975432 2345678899999999 68999999998865543
Q ss_pred cceEEEEEeecCCCChHHHHhhcC--------------------------------------------------------
Q 035862 150 GIQRLLVYEYMPNRSLEDRLFSRA-------------------------------------------------------- 173 (393)
Q Consensus 150 ~~~~~lv~e~~~~~~L~~~l~~~~-------------------------------------------------------- 173 (393)
..++||||+.+|+|.+++....
T Consensus 86 --~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (343)
T cd05103 86 --PLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEE 163 (343)
T ss_pred --ceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchh
Confidence 4589999999999999985421
Q ss_pred ---------CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCCccCCCCCCcccccc
Q 035862 174 ---------QPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTA 244 (393)
Q Consensus 174 ---------~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~ 244 (393)
...+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++..............
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 240 (343)
T cd05103 164 EEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGD 240 (343)
T ss_pred hhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCC
Confidence 12367788889999999999999998 999999999999999999999999999876433222212223
Q ss_pred ccccCCccCccccccCCCCchhhHHHHHHHHHHHHh-CCCccCCCCchhhhHHHHHHhhcCcCCcccccccCcccccccC
Q 035862 245 VVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILT-GRRVLERNRPTMEQKLLEWVKQFPADGKKFSMMIDPRLRNQYS 323 (393)
Q Consensus 245 ~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (393)
..++..|+|||.+.+..++.++||||||+++|+|++ |..||........ ....... +. ....+
T Consensus 241 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~--~~~~~~~----~~----------~~~~~ 304 (343)
T cd05103 241 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE--FCRRLKE----GT----------RMRAP 304 (343)
T ss_pred CCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHH--HHHHHhc----cC----------CCCCC
Confidence 345678999999988899999999999999999997 8899865432211 1111110 00 00011
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhh
Q 035862 324 INAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQE 361 (393)
Q Consensus 324 ~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~~~~ 361 (393)
...+.++.+++..||+.||++||++.+++++|..+++.
T Consensus 305 ~~~~~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~~~~ 342 (343)
T cd05103 305 DYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 342 (343)
T ss_pred CCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 12346789999999999999999999999999998864
No 98
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=3.1e-43 Score=327.48 Aligned_cols=246 Identities=26% Similarity=0.340 Sum_probs=196.3
Q ss_pred ceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCC---cccHHHHHHHHHHhhcCCCCccceeeeeeecCCcccceEE
Q 035862 78 LKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG---LQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQRL 154 (393)
Q Consensus 78 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 154 (393)
+.||+|+||.||++.+..+ +..||+|.+.... ......+.+|++++..++||||+++++++...+ ..+
T Consensus 1 ~~lG~G~~g~V~~~~~~~~-----~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~----~~~ 71 (325)
T cd05594 1 KLLGKGTFGKVILVKEKAT-----GRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHD----RLC 71 (325)
T ss_pred CeeeeCCCEEEEEEEECCC-----CCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCC----EEE
Confidence 3699999999999986543 3469999987532 123345678999999999999999999988776 569
Q ss_pred EEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhc-CCCCCeEeccCCCCCeEeCCCCceEEeeccCCccC
Q 035862 155 LVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHE-GLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREG 233 (393)
Q Consensus 155 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~-~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~ 233 (393)
+||||+++++|..++. ....+++..++.++.||+.||.|||+ . ||+||||||+|||++.++.+||+|||++...
T Consensus 72 lv~E~~~~~~L~~~l~--~~~~l~~~~~~~~~~qi~~aL~~lH~~~---~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~ 146 (325)
T cd05594 72 FVMEYANGGELFFHLS--RERVFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEG 146 (325)
T ss_pred EEEeCCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhcC---CEEecCCCCCeEEECCCCCEEEecCCCCeec
Confidence 9999999999998884 34568999999999999999999997 6 9999999999999999999999999998753
Q ss_pred CCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcCCcccccc
Q 035862 234 PTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKFSMM 313 (393)
Q Consensus 234 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (393)
..... ......||+.|+|||++.+..++.++|||||||++|+|++|..||............ ... .
T Consensus 147 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i---~~~---~------ 212 (325)
T cd05594 147 IKDGA--TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELI---LME---E------ 212 (325)
T ss_pred CCCCc--ccccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHHHHHH---hcC---C------
Confidence 22211 123457999999999999999999999999999999999999999765432111111 000 0
Q ss_pred cCcccccccCHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHHHHH
Q 035862 314 IDPRLRNQYSINAARRVAKLADNCLKKNPEERP-----TMNQVVESLKL 357 (393)
Q Consensus 314 ~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rp-----s~~~~l~~l~~ 357 (393)
...+...+.++.+|+.+||+.||++|+ ++.++++|.|.
T Consensus 213 ------~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~ 255 (325)
T cd05594 213 ------IRFPRTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQHKFF 255 (325)
T ss_pred ------CCCCCCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcCCCc
Confidence 001123457889999999999999996 99999999764
No 99
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=3.3e-43 Score=330.78 Aligned_cols=256 Identities=27% Similarity=0.365 Sum_probs=205.3
Q ss_pred cCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCC---cccHHHHHHHHHHhhcCCCCccceeeeeeecCCc
Q 035862 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG---LQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDE 148 (393)
Q Consensus 72 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 148 (393)
++|.+.+.||+|+||+||+|.+..+ +..||+|++.... ......+.+|+.++..++||||+++++++...+
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~-----~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~- 74 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDT-----GQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEE- 74 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCC-----CCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCC-
Confidence 4799999999999999999997543 3469999987532 133456788999999999999999999988766
Q ss_pred ccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeecc
Q 035862 149 RGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFG 228 (393)
Q Consensus 149 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg 228 (393)
+.++||||+.+++|.+++... ..+++..++.++.|++.||+|||+. ||+||||||+|||++.++.+||+|||
T Consensus 75 ---~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---giiH~Dlkp~NIll~~~~~~kL~Dfg 146 (350)
T cd05573 75 ---HLYLVMEYMPGGDLMNLLIRK--DVFPEETARFYIAELVLALDSVHKL---GFIHRDIKPDNILIDADGHIKLADFG 146 (350)
T ss_pred ---eEEEEEcCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEeecCC
Confidence 569999999999999998544 5689999999999999999999998 99999999999999999999999999
Q ss_pred CCccCCCCC---------------------------CccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhC
Q 035862 229 LAREGPTGD---------------------------HTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTG 281 (393)
Q Consensus 229 ~a~~~~~~~---------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg 281 (393)
++....... .........||+.|+|||++.+..++.++|||||||++|+|++|
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g 226 (350)
T cd05573 147 LCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYG 226 (350)
T ss_pred CCccCcccCcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccC
Confidence 997654332 00122345799999999999999999999999999999999999
Q ss_pred CCccCCCCchhhhHH-HHHHhhcCcCCcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCC-HHHHHHHHHH
Q 035862 282 RRVLERNRPTMEQKL-LEWVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPT-MNQVVESLKL 357 (393)
Q Consensus 282 ~~pf~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps-~~~~l~~l~~ 357 (393)
+.||........... ..+.... .......++.++.+||.+||. ||.+||+ +.++++|.|.
T Consensus 227 ~~Pf~~~~~~~~~~~i~~~~~~~---------------~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~hp~~ 288 (350)
T cd05573 227 FPPFYSDTLQETYNKIINWKESL---------------RFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSHPFF 288 (350)
T ss_pred CCCCCCCCHHHHHHHHhccCCcc---------------cCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcCCCc
Confidence 999987653221111 1100000 000011146789999999997 9999999 9999999764
No 100
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=3.2e-43 Score=334.00 Aligned_cols=256 Identities=24% Similarity=0.309 Sum_probs=200.9
Q ss_pred cCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCc---ccHHHHHHHHHHhhcCCCCccceeeeeeecCCc
Q 035862 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL---QGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDE 148 (393)
Q Consensus 72 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 148 (393)
++|++++.||+|+||.||+|.+..+ +..||+|.+..... .....+.+|+.+++.++||||+++++.+...+
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~-----~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~- 74 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDT-----NALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKD- 74 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCC-----CCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-
Confidence 3699999999999999999997544 44699999865321 22345778999999999999999999998766
Q ss_pred ccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeecc
Q 035862 149 RGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFG 228 (393)
Q Consensus 149 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg 228 (393)
.+++||||+++++|.+++.. ...+++..++.++.||+.||+|||++ +|+||||||+|||++.++.+||+|||
T Consensus 75 ---~~~lv~E~~~~g~L~~~i~~--~~~~~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nill~~~~~ikL~DFG 146 (376)
T cd05598 75 ---NLYFVMDYIPGGDMMSLLIR--LGIFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFG 146 (376)
T ss_pred ---EEEEEEeCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHEEECCCCCEEEEeCC
Confidence 56999999999999999843 45688999999999999999999998 99999999999999999999999999
Q ss_pred CCccCCCCCC-----------------------------------------ccccccccccCCccCccccccCCCCchhh
Q 035862 229 LAREGPTGDH-----------------------------------------THVSTAVVGTYGYAAPEYIETGHLKSQSD 267 (393)
Q Consensus 229 ~a~~~~~~~~-----------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~D 267 (393)
++........ .......+||+.|+|||++.+..++.++|
T Consensus 147 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~D 226 (376)
T cd05598 147 LCTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCD 226 (376)
T ss_pred CCccccccccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCccee
Confidence 9743210000 00012357999999999999999999999
Q ss_pred HHHHHHHHHHHHhCCCccCCCCchhhhHHH-HHHhhcCcCCcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCC
Q 035862 268 IWSFGVVLYEILTGRRVLERNRPTMEQKLL-EWVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERP 346 (393)
Q Consensus 268 iwslGvil~elltg~~pf~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rp 346 (393)
||||||++|+|++|+.||....+....... .+... ........++.++.++|.+|+ .+|.+|+
T Consensus 227 iwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~---------------~~~~~~~~~s~~~~~li~~l~-~~p~~R~ 290 (376)
T cd05598 227 WWSVGVILYEMLVGQPPFLADTPAETQLKVINWETT---------------LHIPSQAKLSREASDLILRLC-CGAEDRL 290 (376)
T ss_pred eeeccceeeehhhCCCCCCCCCHHHHHHHHhccCcc---------------ccCCCCCCCCHHHHHHHHHHh-cCHhhcC
Confidence 999999999999999999876543222111 11000 000111134577888999976 5999999
Q ss_pred ---CHHHHHHHHHH
Q 035862 347 ---TMNQVVESLKL 357 (393)
Q Consensus 347 ---s~~~~l~~l~~ 357 (393)
++.++++|.|.
T Consensus 291 ~~~t~~ell~h~~~ 304 (376)
T cd05598 291 GKNGADEIKAHPFF 304 (376)
T ss_pred CCCCHHHHhCCCCc
Confidence 99999999764
No 101
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=5.8e-43 Score=332.84 Aligned_cols=255 Identities=24% Similarity=0.330 Sum_probs=199.7
Q ss_pred CCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCc---ccHHHHHHHHHHhhcCCCCccceeeeeeecCCcc
Q 035862 73 GFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL---QGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDER 149 (393)
Q Consensus 73 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 149 (393)
.|++++.||+|+||+||+|.+..+ +..||+|++..... .....+.+|+.+++.++||||+++++.+...+
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~-----~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~-- 74 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDT-----KALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKD-- 74 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCC-----CCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCC--
Confidence 588999999999999999986543 34699999875421 23345778999999999999999999998766
Q ss_pred cceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccC
Q 035862 150 GIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGL 229 (393)
Q Consensus 150 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~ 229 (393)
.+++||||+++|+|.+++.. ...+++..+..++.||+.||+|||+. +|+||||||+|||++.+|.+||+|||+
T Consensus 75 --~~~lv~E~~~gg~L~~~l~~--~~~~~e~~~~~~~~qi~~al~~lH~~---~ivHrDlKp~NILl~~~g~~kL~DFGl 147 (382)
T cd05625 75 --NLYFVMDYIPGGDMMSLLIR--MGIFPEDLARFYIAELTCAVESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGL 147 (382)
T ss_pred --EEEEEEeCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEEeECCC
Confidence 56999999999999999854 34688999999999999999999998 999999999999999999999999999
Q ss_pred CccCCCCCC---------------------------------------------ccccccccccCCccCccccccCCCCc
Q 035862 230 AREGPTGDH---------------------------------------------THVSTAVVGTYGYAAPEYIETGHLKS 264 (393)
Q Consensus 230 a~~~~~~~~---------------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~ 264 (393)
+........ .......+||+.|+|||++.+..++.
T Consensus 148 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~ 227 (382)
T cd05625 148 CTGFRWTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQ 227 (382)
T ss_pred CccccccccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCC
Confidence 753210000 00112357999999999999999999
Q ss_pred hhhHHHHHHHHHHHHhCCCccCCCCchhhhHH-HHHHhhcCcCCcccccccCcccccccCHHHHHHHHHHHHHhcccCCC
Q 035862 265 QSDIWSFGVVLYEILTGRRVLERNRPTMEQKL-LEWVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPE 343 (393)
Q Consensus 265 ~~DiwslGvil~elltg~~pf~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~ 343 (393)
++|||||||++|||++|+.||....+...... ..+... .........++++.+++.+|+ .+|.
T Consensus 228 ~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~---------------~~~p~~~~~s~~~~~li~~l~-~~p~ 291 (382)
T cd05625 228 LCDWWSVGVILYEMLVGQPPFLAQTPLETQMKVINWQTS---------------LHIPPQAKLSPEASDLIIKLC-RGPE 291 (382)
T ss_pred eeeEEechHHHHHHHhCCCCCCCCCHHHHHHHHHccCCC---------------cCCCCcccCCHHHHHHHHHHc-cCHh
Confidence 99999999999999999999986554322211 111000 000111234677888998876 5999
Q ss_pred CCCC---HHHHHHHHHH
Q 035862 344 ERPT---MNQVVESLKL 357 (393)
Q Consensus 344 ~Rps---~~~~l~~l~~ 357 (393)
+|++ +.++++|.+.
T Consensus 292 ~R~~~~~~~ei~~hp~f 308 (382)
T cd05625 292 DRLGKNGADEIKAHPFF 308 (382)
T ss_pred HcCCCCCHHHHhcCCCc
Confidence 9997 9999998764
No 102
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=8.7e-43 Score=323.63 Aligned_cols=246 Identities=25% Similarity=0.367 Sum_probs=195.9
Q ss_pred ceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCC---cccHHHHHHHHHHhhcC-CCCccceeeeeeecCCcccceE
Q 035862 78 LKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG---LQGHKQWLAEVQFLGVV-SHPNLVKLLGYCSTEDERGIQR 153 (393)
Q Consensus 78 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~ 153 (393)
+.||+|+||.||+|.+..+ +..||+|.+.+.. ......+..|..++..+ +||||+++++++...+ .+
T Consensus 1 ~~lg~G~~g~V~~~~~~~~-----~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~----~~ 71 (320)
T cd05590 1 RVLGKGSFGKVMLARLKES-----GRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPD----RL 71 (320)
T ss_pred CeeeeCCCeEEEEEEEcCC-----CCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCC----EE
Confidence 3699999999999986543 3469999987532 22344566788888776 6999999999998776 56
Q ss_pred EEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCCccC
Q 035862 154 LLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREG 233 (393)
Q Consensus 154 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~ 233 (393)
++||||+.+++|.+++.. ...+++..++.++.|++.||.|||+. +++||||||+|||++.++.+||+|||++...
T Consensus 72 ~iv~Ey~~~g~L~~~i~~--~~~l~~~~~~~~~~ql~~~L~~lH~~---~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~ 146 (320)
T cd05590 72 FFVMEFVNGGDLMFHIQK--SRRFDEARARFYAAEITSALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEG 146 (320)
T ss_pred EEEEcCCCCchHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeeCCCCeec
Confidence 999999999999998843 35689999999999999999999998 9999999999999999999999999998753
Q ss_pred CCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcCCcccccc
Q 035862 234 PTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKFSMM 313 (393)
Q Consensus 234 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (393)
..... ......||+.|+|||++.+..++.++|||||||++|+|++|+.||........ ....... .
T Consensus 147 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~---~~~i~~~---~------ 212 (320)
T cd05590 147 IFNGK--TTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDL---FEAILND---E------ 212 (320)
T ss_pred CcCCC--cccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHH---HHHHhcC---C------
Confidence 22211 22345799999999999999999999999999999999999999976543211 1111110 0
Q ss_pred cCcccccccCHHHHHHHHHHHHHhcccCCCCCCCH------HHHHHHHHH
Q 035862 314 IDPRLRNQYSINAARRVAKLADNCLKKNPEERPTM------NQVVESLKL 357 (393)
Q Consensus 314 ~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~------~~~l~~l~~ 357 (393)
...+..++.++.+|+.+||+.||.+||++ +++++|.|.
T Consensus 213 ------~~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~h~~f 256 (320)
T cd05590 213 ------VVYPTWLSQDAVDILKAFMTKNPTMRLGSLTLGGEEAILRHPFF 256 (320)
T ss_pred ------CCCCCCCCHHHHHHHHHHcccCHHHCCCCCCCCCHHHHHcCCCc
Confidence 01112345788999999999999999998 889988764
No 103
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=3.3e-42 Score=314.39 Aligned_cols=277 Identities=30% Similarity=0.434 Sum_probs=207.6
Q ss_pred cCC-cccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCc-ccHHHHHHHHHHhhcCCCCccceeeeeeecCCcc
Q 035862 72 NGF-NRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL-QGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDER 149 (393)
Q Consensus 72 ~~y-~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 149 (393)
++| ++.+.||+|+||+||++.+... ....+..||+|.+..... .....+.+|+.+++.++||||+++++++...+..
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~-~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 81 (283)
T cd05080 3 KRYLKKIRVLGEGHFGKVSLYCYDPA-NDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGK 81 (283)
T ss_pred hhhceeceecccCCCcEEEEeeEccc-cCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCc
Confidence 345 8899999999999999875422 234556799999875432 2345678899999999999999999988765433
Q ss_pred cceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccC
Q 035862 150 GIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGL 229 (393)
Q Consensus 150 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~ 229 (393)
..++||||+++++|.+++.. ..+++..++.++.|++.||.|||++ +++||||||+||++++++.++|+|||+
T Consensus 82 --~~~lv~e~~~~~~l~~~~~~---~~l~~~~~~~i~~~l~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~ 153 (283)
T cd05080 82 --GLQLIMEYVPLGSLRDYLPK---HKLNLAQLLLFAQQICEGMAYLHSQ---HYIHRDLAARNVLLDNDRLVKIGDFGL 153 (283)
T ss_pred --eEEEEecCCCCCCHHHHHHH---cCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccChheEEEcCCCcEEEeeccc
Confidence 56899999999999999843 3489999999999999999999998 999999999999999999999999999
Q ss_pred CccCCCCCCcc-ccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcCCc
Q 035862 230 AREGPTGDHTH-VSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGK 308 (393)
Q Consensus 230 a~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 308 (393)
+.......... ......++..|+|||.+.+..++.++||||||+++|+|++|..||............. ... .....
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~-~~~-~~~~~ 231 (283)
T cd05080 154 AKAVPEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGP-KQG-QMTVV 231 (283)
T ss_pred ccccCCcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcc-ccc-ccchh
Confidence 98654332211 1122345667999999988889999999999999999999999986543322111100 000 00000
Q ss_pred ccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHH
Q 035862 309 KFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAV 359 (393)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~~ 359 (393)
......+.......+..++..+.+++.+||+.+|++|||++++++.|+.+.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~ 282 (283)
T cd05080 232 RLIELLERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH 282 (283)
T ss_pred hhhhhhhcCCCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence 011111111122223345688999999999999999999999999998764
No 104
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=1.3e-42 Score=321.91 Aligned_cols=245 Identities=24% Similarity=0.398 Sum_probs=192.2
Q ss_pred ceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCC---cccHHHHHHHHHHhhc-CCCCccceeeeeeecCCcccceE
Q 035862 78 LKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG---LQGHKQWLAEVQFLGV-VSHPNLVKLLGYCSTEDERGIQR 153 (393)
Q Consensus 78 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~-l~h~niv~~~~~~~~~~~~~~~~ 153 (393)
+.||+|+||.||+|.+..++ ..||+|.+.... .........|..++.. .+||||+++++++...+ ..
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~----~~ 71 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTN-----EFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKE----HL 71 (316)
T ss_pred CeeeeCCCeEEEEEEECCCC-----CEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCC----EE
Confidence 36999999999999975443 469999987532 1223445566777665 47999999999987766 56
Q ss_pred EEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCCccC
Q 035862 154 LLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREG 233 (393)
Q Consensus 154 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~ 233 (393)
++||||+++++|.+++.. ...+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||++...
T Consensus 72 ~lv~e~~~gg~L~~~~~~--~~~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~ 146 (316)
T cd05592 72 FFVMEYLNGGDLMFHIQS--SGRFDEARARFYAAEIICGLQFLHKK---GIIYRDLKLDNVLLDKDGHIKIADFGMCKEN 146 (316)
T ss_pred EEEEcCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHeEECCCCCEEEccCcCCeEC
Confidence 999999999999998843 34689999999999999999999998 9999999999999999999999999999754
Q ss_pred CCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcCCcccccc
Q 035862 234 PTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKFSMM 313 (393)
Q Consensus 234 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (393)
.... .......||+.|+|||++.+..++.++|||||||++|+|++|..||........ .......
T Consensus 147 ~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~--~~~i~~~----------- 211 (316)
T cd05592 147 MNGE--GKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDEL--FDSILND----------- 211 (316)
T ss_pred CCCC--CccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHH--HHHHHcC-----------
Confidence 3222 123456799999999999999999999999999999999999999976543211 1111100
Q ss_pred cCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHH-HHHHHHH
Q 035862 314 IDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMN-QVVESLK 356 (393)
Q Consensus 314 ~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~-~~l~~l~ 356 (393)
....+..++.++.+|+.+||+.||.+||++. ++++|.+
T Consensus 212 -----~~~~~~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~~h~~ 250 (316)
T cd05592 212 -----RPHFPRWISKEAKDCLSKLFERDPTKRLGVDGDIRQHPF 250 (316)
T ss_pred -----CCCCCCCCCHHHHHHHHHHccCCHHHcCCChHHHHcCcc
Confidence 0111223457789999999999999999865 7777654
No 105
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=9.6e-42 Score=308.46 Aligned_cols=260 Identities=28% Similarity=0.457 Sum_probs=206.0
Q ss_pred cCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCc-ccHHHHHHHHHHhhcCCCCccceeeeeeecCCccc
Q 035862 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL-QGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERG 150 (393)
Q Consensus 72 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 150 (393)
++|.+.+.||+|+||.||+|.+...+ .....|++|.+..... .....+.+|+.+++.++||||+++++++...+
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~--~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--- 78 (266)
T cd05033 4 SYVTIEKVIGGGEFGEVCRGRLKLPG--KKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSR--- 78 (266)
T ss_pred HHceeeeEecCCccceEEEEEEccCC--CCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCC---
Confidence 46899999999999999999875431 2345799998875432 23456788999999999999999999987765
Q ss_pred ceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCC
Q 035862 151 IQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLA 230 (393)
Q Consensus 151 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a 230 (393)
..+++|||+.+++|.+++.... ..+++..++.++.|++.||.|||+. +++|+||||+||++++++.++|+|||++
T Consensus 79 -~~~iv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~di~p~nili~~~~~~~l~dfg~~ 153 (266)
T cd05033 79 -PVMIITEYMENGSLDKFLREND-GKFTVGQLVGMLRGIASGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSDFGLS 153 (266)
T ss_pred -ceEEEEEcCCCCCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCCEEECccchh
Confidence 4599999999999999986433 3689999999999999999999998 9999999999999999999999999999
Q ss_pred ccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHh-CCCccCCCCchhhhHHHHHHhhcCcCCcc
Q 035862 231 REGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILT-GRRVLERNRPTMEQKLLEWVKQFPADGKK 309 (393)
Q Consensus 231 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 309 (393)
................++..|+|||.+.+..++.++||||||+++|+|++ |..||....... ........
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~---~~~~~~~~------ 224 (266)
T cd05033 154 RRLEDSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQD---VIKAVEDG------ 224 (266)
T ss_pred hcccccccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHHH---HHHHHHcC------
Confidence 87642222212223345678999999998899999999999999999998 999986543221 11111110
Q ss_pred cccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q 035862 310 FSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLA 358 (393)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~ 358 (393)
.....+..++..+.+++.+||+.+|++||++.+++++|..+
T Consensus 225 --------~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 225 --------YRLPPPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred --------CCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 00011123457789999999999999999999999999875
No 106
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=4.2e-42 Score=314.45 Aligned_cols=272 Identities=26% Similarity=0.363 Sum_probs=200.2
Q ss_pred CCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCc--ccHHHHHHHHHHhhcC---CCCccceeeeeeecCC
Q 035862 73 GFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL--QGHKQWLAEVQFLGVV---SHPNLVKLLGYCSTED 147 (393)
Q Consensus 73 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l---~h~niv~~~~~~~~~~ 147 (393)
+|++.+.||+|+||+||+|.+..++ ..||+|.+..... .....+.+|+.+++.+ +||||+++++++....
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~-----~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~ 75 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSG-----HFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSR 75 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCC-----cEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeecccc
Confidence 4889999999999999999976443 4699998865321 1223455677766654 7999999999886532
Q ss_pred c-ccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEee
Q 035862 148 E-RGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSD 226 (393)
Q Consensus 148 ~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~D 226 (393)
. .....++||||+.+ +|.+++.......+++..++.++.|++.||.|||+. |++||||||+|||++.++.+||+|
T Consensus 76 ~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~kl~d 151 (288)
T cd07863 76 TDRETKVTLVFEHVDQ-DLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGQVKLAD 151 (288)
T ss_pred CCCCceEEEEEccccc-CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECc
Confidence 2 22357899999964 899988665556689999999999999999999998 999999999999999999999999
Q ss_pred ccCCccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhh-HHHHHHhhcCc
Q 035862 227 FGLAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQ-KLLEWVKQFPA 305 (393)
Q Consensus 227 fg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~-~~~~~~~~~~~ 305 (393)
||++....... ......|+..|+|||++.+..++.++|||||||++|+|++|.+||......... ...........
T Consensus 152 fg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~ 228 (288)
T cd07863 152 FGLARIYSCQM---ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPE 228 (288)
T ss_pred cCccccccCcc---cCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCCh
Confidence 99997653322 123456889999999999889999999999999999999999999765443221 11111110000
Q ss_pred CCccc-----ccccCccc---ccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 035862 306 DGKKF-----SMMIDPRL---RNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLK 356 (393)
Q Consensus 306 ~~~~~-----~~~~~~~~---~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~ 356 (393)
..... .....+.. .......++..+.+++.+||+.||++|||+.+++.|.|
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~hp~ 287 (288)
T cd07863 229 DDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQHPF 287 (288)
T ss_pred hhCcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcCCC
Confidence 00000 00000000 01111235677899999999999999999999998865
No 107
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-42 Score=321.92 Aligned_cols=267 Identities=28% Similarity=0.430 Sum_probs=225.7
Q ss_pred CCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCC-CcccHHHHHHHHHHhhcCCCCccceeeeeeecCCcccc
Q 035862 73 GFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNH-GLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGI 151 (393)
Q Consensus 73 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 151 (393)
.....++||.|.||.||+|.+..-. ++....||||..+.. .....+.|+.|+.+++.+.||||++++|+|.+..
T Consensus 390 ~Itl~r~iG~GqFGdVy~gvYt~~~-kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e~P---- 464 (974)
T KOG4257|consen 390 LITLKRLIGEGQFGDVYKGVYTDPE-KGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVEQP---- 464 (974)
T ss_pred hccHHHhhcCCcccceeeeEecccc-cCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeeccc----
Confidence 4556678999999999999986543 677888999999874 4455778999999999999999999999998765
Q ss_pred eEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCCc
Q 035862 152 QRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAR 231 (393)
Q Consensus 152 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~ 231 (393)
.++|||.+.-|.|.+||..++ ..++......++.||+.||+|||+. .+|||||...|||+.....+||+|||+++
T Consensus 465 -~WivmEL~~~GELr~yLq~nk-~sL~l~tL~ly~~Qi~talaYLeSk---rfVHRDIAaRNiLVsSp~CVKLaDFGLSR 539 (974)
T KOG4257|consen 465 -MWIVMELAPLGELREYLQQNK-DSLPLRTLTLYCYQICTALAYLESK---RFVHRDIAARNILVSSPQCVKLADFGLSR 539 (974)
T ss_pred -eeEEEecccchhHHHHHHhcc-ccchHHHHHHHHHHHHHHHHHHHhh---chhhhhhhhhheeecCcceeeecccchhh
Confidence 499999999999999997554 4589999999999999999999998 99999999999999999999999999999
Q ss_pred cCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHh-CCCccCCCCchhhhHHHHHHhhcCcCCccc
Q 035862 232 EGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILT-GRRVLERNRPTMEQKLLEWVKQFPADGKKF 310 (393)
Q Consensus 232 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (393)
.......+.. +...-+..|||||.+....++.++|||-|||++||++. |..||..-.. ++.
T Consensus 540 ~~ed~~yYka-S~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkN-----------------sDV 601 (974)
T KOG4257|consen 540 YLEDDAYYKA-SRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKN-----------------SDV 601 (974)
T ss_pred hccccchhhc-cccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccc-----------------cce
Confidence 8876655432 34445668999999999999999999999999999876 8899975322 222
Q ss_pred ccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhhcCCCC
Q 035862 311 SMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQESEQGSS 367 (393)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~~~~~~~~~~ 367 (393)
-..+..+-+.+.+.+|++.++.|+.+||.++|.+||.+.++...|..++++....++
T Consensus 602 I~~iEnGeRlP~P~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv~qeek~~~~ 658 (974)
T KOG4257|consen 602 IGHIENGERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVLQEEKINSS 658 (974)
T ss_pred EEEecCCCCCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHHHHHhhhhhH
Confidence 333445556677888999999999999999999999999999999998885544433
No 108
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=4.1e-42 Score=334.90 Aligned_cols=274 Identities=22% Similarity=0.336 Sum_probs=198.4
Q ss_pred HHHHHhcCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcccHHHHHHHHHHhhcCC------CCcccee
Q 035862 66 ELREATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVS------HPNLVKL 139 (393)
Q Consensus 66 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~------h~niv~~ 139 (393)
++....++|++.++||+|+||+||+|.+... +..||+|++.... ........|+.+++.+. |.+++.+
T Consensus 123 ~~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~-----~~~vAvK~i~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i 196 (467)
T PTZ00284 123 DIDVSTQRFKILSLLGEGTFGKVVEAWDRKR-----KEYCAVKIVRNVP-KYTRDAKIEIQFMEKVRQADPADRFPLMKI 196 (467)
T ss_pred ccccCCCcEEEEEEEEeccCEEEEEEEEcCC-----CeEEEEEEEecch-hhHHHHHHHHHHHHHHhhcCcccCcceeee
Confidence 3344567899999999999999999987543 3469999986532 22233455666666654 4568888
Q ss_pred eeeeecCCcccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhc-CCCCCeEeccCCCCCeEeCC
Q 035862 140 LGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHE-GLEIQVIYRDFKTSNVLLDG 218 (393)
Q Consensus 140 ~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~-~~~~~ivH~Dikp~NIll~~ 218 (393)
++++..... +.|+|||++ +++|.+++.. ...+++..++.++.||+.||.|||+ . ||+||||||+|||++.
T Consensus 197 ~~~~~~~~~---~~~iv~~~~-g~~l~~~l~~--~~~l~~~~~~~i~~qi~~aL~yLH~~~---gIiHrDlKP~NILl~~ 267 (467)
T PTZ00284 197 QRYFQNETG---HMCIVMPKY-GPCLLDWIMK--HGPFSHRHLAQIIFQTGVALDYFHTEL---HLMHTDLKPENILMET 267 (467)
T ss_pred EEEEEcCCc---eEEEEEecc-CCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHEEEec
Confidence 888875443 568999998 7789988843 3568999999999999999999997 5 9999999999999987
Q ss_pred CC----------------ceEEeeccCCccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCC
Q 035862 219 NF----------------KPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGR 282 (393)
Q Consensus 219 ~~----------------~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~ 282 (393)
++ .+||+|||.+..... .....+||+.|+|||++.+..|+.++|||||||++|||++|+
T Consensus 268 ~~~~~~~~~~~~~~~~~~~vkl~DfG~~~~~~~-----~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~ 342 (467)
T PTZ00284 268 SDTVVDPVTNRALPPDPCRVRICDLGGCCDERH-----SRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGK 342 (467)
T ss_pred CCcccccccccccCCCCceEEECCCCccccCcc-----ccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCC
Confidence 65 499999998754221 223568999999999999999999999999999999999999
Q ss_pred CccCCCCchhhhHHHH-HHhhcCcCC----------------cccccccCcc-c----c--cccCHHHHHHHHHHHHHhc
Q 035862 283 RVLERNRPTMEQKLLE-WVKQFPADG----------------KKFSMMIDPR-L----R--NQYSINAARRVAKLADNCL 338 (393)
Q Consensus 283 ~pf~~~~~~~~~~~~~-~~~~~~~~~----------------~~~~~~~~~~-~----~--~~~~~~~~~~l~~li~~~l 338 (393)
.||...........+. ....++..- .......++. + . ..........+.+||.+||
T Consensus 343 ~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL 422 (467)
T PTZ00284 343 LLYDTHDNLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLL 422 (467)
T ss_pred CCCCCCChHHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhC
Confidence 9998665432222111 111111000 0000000000 0 0 0000012456789999999
Q ss_pred ccCCCCCCCHHHHHHHHHHHH
Q 035862 339 KKNPEERPTMNQVVESLKLAV 359 (393)
Q Consensus 339 ~~dp~~Rps~~~~l~~l~~~~ 359 (393)
++||++|||+.|+++|.|...
T Consensus 423 ~~dP~~R~ta~e~L~Hp~~~~ 443 (467)
T PTZ00284 423 HYDRQKRLNARQMTTHPYVLK 443 (467)
T ss_pred CcChhhCCCHHHHhcCccccc
Confidence 999999999999999998764
No 109
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=1.2e-42 Score=322.99 Aligned_cols=246 Identities=26% Similarity=0.388 Sum_probs=196.0
Q ss_pred ceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCC---cccHHHHHHHHHHhhcC-CCCccceeeeeeecCCcccceE
Q 035862 78 LKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG---LQGHKQWLAEVQFLGVV-SHPNLVKLLGYCSTEDERGIQR 153 (393)
Q Consensus 78 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~ 153 (393)
+.||+|+||.||+|.+..++ ..||+|.+.... ......+..|.+++..+ +||||+++++++...+ ..
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~-----~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~----~~ 71 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTD-----EVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKD----RL 71 (321)
T ss_pred CccccCCCeEEEEEEECCCC-----CEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCC----eE
Confidence 36999999999999865433 469999987532 22334566788888865 6999999999998776 56
Q ss_pred EEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCCccC
Q 035862 154 LLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREG 233 (393)
Q Consensus 154 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~ 233 (393)
++||||+++++|..++. ....+++..+..++.||+.||.|||++ ||+||||||+|||++.++.+||+|||++...
T Consensus 72 ~lv~E~~~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~ 146 (321)
T cd05591 72 FFVMEYVNGGDLMFQIQ--RSRKFDEPRSRFYAAEVTLALMFLHRH---GVIYRDLKLDNILLDAEGHCKLADFGMCKEG 146 (321)
T ss_pred EEEEeCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeecccceec
Confidence 99999999999999884 345688999999999999999999998 9999999999999999999999999998753
Q ss_pred CCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcCCcccccc
Q 035862 234 PTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKFSMM 313 (393)
Q Consensus 234 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (393)
..... ......|++.|+|||++.+..++.++|||||||++|+|++|+.||........ ....... .
T Consensus 147 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~---~~~i~~~---~------ 212 (321)
T cd05591 147 ILNGV--TTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDL---FESILHD---D------ 212 (321)
T ss_pred ccCCc--cccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHHH---HHHHHcC---C------
Confidence 22221 22345789999999999999999999999999999999999999986543221 1111110 0
Q ss_pred cCcccccccCHHHHHHHHHHHHHhcccCCCCCC-------CHHHHHHHHHH
Q 035862 314 IDPRLRNQYSINAARRVAKLADNCLKKNPEERP-------TMNQVVESLKL 357 (393)
Q Consensus 314 ~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rp-------s~~~~l~~l~~ 357 (393)
...+..++.++.+++.+||+.||++|| ++.++++|.+.
T Consensus 213 ------~~~p~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~hp~~ 257 (321)
T cd05591 213 ------VLYPVWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQHPFF 257 (321)
T ss_pred ------CCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcCCcc
Confidence 001112457889999999999999999 89999999754
No 110
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=3.6e-42 Score=326.20 Aligned_cols=275 Identities=26% Similarity=0.319 Sum_probs=203.8
Q ss_pred CCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCC--cccHHHHHHHHHHhhcCCCCccceeeeeeecCCcc-
Q 035862 73 GFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG--LQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDER- 149 (393)
Q Consensus 73 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~- 149 (393)
+|++.+.||+|+||.||+|.+..+ +..||+|.+.... ....+.+.+|+.+++.++||||+++++++...+..
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~-----~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 75 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRD-----GKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDP 75 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCC-----CCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccc
Confidence 478889999999999999986533 3469999886532 22345678999999999999999999998766521
Q ss_pred cceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccC
Q 035862 150 GIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGL 229 (393)
Q Consensus 150 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~ 229 (393)
....++||||+. ++|.+++. ....+++..++.++.||+.||.|||+. +++||||||+|||++.++.+||+|||+
T Consensus 76 ~~~~~lv~e~~~-~~l~~~~~--~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~ 149 (372)
T cd07853 76 FEEIYVVTELMQ-SDLHKIIV--SPQPLSSDHVKVFLYQILRGLKYLHSA---GILHRDIKPGNLLVNSNCVLKICDFGL 149 (372)
T ss_pred cceEEEEeeccc-cCHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHHEEECCCCCEEeccccc
Confidence 125699999995 58888773 345689999999999999999999998 999999999999999999999999999
Q ss_pred CccCCCCCCccccccccccCCccCccccccC-CCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcCCc
Q 035862 230 AREGPTGDHTHVSTAVVGTYGYAAPEYIETG-HLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGK 308 (393)
Q Consensus 230 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 308 (393)
+........ .......+++.|+|||++.+. .++.++|||||||++|||++|+.||....+......+......+....
T Consensus 150 a~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~ 228 (372)
T cd07853 150 ARVEEPDES-KHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEA 228 (372)
T ss_pred eeecccCcc-ccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHH
Confidence 976433221 122345688999999998774 579999999999999999999999987654432221111100000000
Q ss_pred ------cccc-cc----Cc-cc--ccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHH
Q 035862 309 ------KFSM-MI----DP-RL--RNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAV 359 (393)
Q Consensus 309 ------~~~~-~~----~~-~~--~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~~ 359 (393)
.... +. .+ .. ........++++.+|+.+||+.||++|||+.++++|.|...
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~ 293 (372)
T cd07853 229 MRSACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAHPYLDE 293 (372)
T ss_pred HHHhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcCHhhCC
Confidence 0000 00 00 00 00011123678899999999999999999999999988643
No 111
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=1.1e-41 Score=310.94 Aligned_cols=261 Identities=28% Similarity=0.475 Sum_probs=204.9
Q ss_pred cCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCc-ccHHHHHHHHHHhhcCCCCccceeeeeeecCCccc
Q 035862 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL-QGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERG 150 (393)
Q Consensus 72 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 150 (393)
++|++.+.||+|+||.||+|.+...+ ......+++|.+..... .....+.+|+.+++.++||||+++++++...+
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~-~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--- 80 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPG-MDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQ--- 80 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCC-CCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCC---
Confidence 46888999999999999999864332 23456799999875432 23356788999999999999999999987766
Q ss_pred ceEEEEEeecCCCChHHHHhhcC---------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeE
Q 035862 151 IQRLLVYEYMPNRSLEDRLFSRA---------------QPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVL 215 (393)
Q Consensus 151 ~~~~lv~e~~~~~~L~~~l~~~~---------------~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIl 215 (393)
..++||||+.+++|.+++.... ...+++..+..++.|++.||.|||++ +++||||||+|||
T Consensus 81 -~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~nil 156 (283)
T cd05090 81 -PVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSH---FFVHKDLAARNIL 156 (283)
T ss_pred -ceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhc---CeehhccccceEE
Confidence 4599999999999999985322 23478888999999999999999998 9999999999999
Q ss_pred eCCCCceEEeeccCCccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHh-CCCccCCCCchhhh
Q 035862 216 LDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILT-GRRVLERNRPTMEQ 294 (393)
Q Consensus 216 l~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ellt-g~~pf~~~~~~~~~ 294 (393)
+++++.+||+|||++................++..|+|||.+.+..++.++|||||||++|||++ |..||.......
T Consensus 157 i~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~-- 234 (283)
T cd05090 157 IGEQLHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQE-- 234 (283)
T ss_pred EcCCCcEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHH--
Confidence 99999999999999976543332223334456778999999988889999999999999999998 988987654321
Q ss_pred HHHHHHhhcCcCCcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 035862 295 KLLEWVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKL 357 (393)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~ 357 (393)
.......... ...+..++..+.+++.+||+.||.+||++.+++++|..
T Consensus 235 -~~~~~~~~~~--------------~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 235 -VIEMVRKRQL--------------LPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred -HHHHHHcCCc--------------CCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence 1111111000 01112345778999999999999999999999998853
No 112
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=1.3e-41 Score=309.58 Aligned_cols=262 Identities=28% Similarity=0.434 Sum_probs=203.9
Q ss_pred hcCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCc-ccHHHHHHHHHHhhcCCCCccceeeeeeecCCcc
Q 035862 71 TNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL-QGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDER 149 (393)
Q Consensus 71 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 149 (393)
.++|.+.+.||+|++|.||+|.+...........|++|....... .....+.+|+.+++.++|+||+++++++...+.
T Consensus 5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~- 83 (277)
T cd05036 5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLP- 83 (277)
T ss_pred HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCC-
Confidence 457999999999999999999986533333566799998865432 234567889999999999999999998877663
Q ss_pred cceEEEEEeecCCCChHHHHhhcCC-----CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCC---c
Q 035862 150 GIQRLLVYEYMPNRSLEDRLFSRAQ-----PTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNF---K 221 (393)
Q Consensus 150 ~~~~~lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~---~ 221 (393)
.++||||+.+++|.+++..... ..+++..++.++.||+.||+|||+. +++||||||+||+++.++ .
T Consensus 84 ---~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~nil~~~~~~~~~ 157 (277)
T cd05036 84 ---RFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEEN---HFIHRDIAARNCLLTCKGPGRV 157 (277)
T ss_pred ---cEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchheEEEeccCCCcc
Confidence 4899999999999999854321 3588999999999999999999998 999999999999998765 5
Q ss_pred eEEeeccCCccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHh-CCCccCCCCchhhhHHHHHH
Q 035862 222 PKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILT-GRRVLERNRPTMEQKLLEWV 300 (393)
Q Consensus 222 ~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ellt-g~~pf~~~~~~~~~~~~~~~ 300 (393)
+||+|||++.................+..|+|||++.+..++.++|||||||++|+|++ |..||......... ...
T Consensus 158 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~~---~~~ 234 (277)
T cd05036 158 AKIADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVM---EFV 234 (277)
T ss_pred eEeccCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHH---HHH
Confidence 99999999986532222111122234568999999998999999999999999999997 99999765432211 111
Q ss_pred hhcCcCCcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 035862 301 KQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLK 356 (393)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~ 356 (393)
... .....+..++..+.+++.+||+.+|++||++.+++++|.
T Consensus 235 ~~~--------------~~~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~ 276 (277)
T cd05036 235 TGG--------------GRLDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ 276 (277)
T ss_pred HcC--------------CcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence 110 001112234578899999999999999999999999985
No 113
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.2e-41 Score=314.37 Aligned_cols=268 Identities=28% Similarity=0.421 Sum_probs=208.5
Q ss_pred cCCcccceecccCCceEEEEEEcCCCCC--CCceEEEEEEecCCC-cccHHHHHHHHHHhhcC-CCCccceeeeeeecCC
Q 035862 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGR--GEPLVVAVKKLNNHG-LQGHKQWLAEVQFLGVV-SHPNLVKLLGYCSTED 147 (393)
Q Consensus 72 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~--~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~ 147 (393)
++|.+.+.||+|+||.||+|.+...+.. .....+|+|.+.... ......+.+|+.+++.+ +||||+++++++...+
T Consensus 18 ~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~ 97 (307)
T cd05098 18 DRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDG 97 (307)
T ss_pred HHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCC
Confidence 5699999999999999999987543321 234569999987542 23345677899999999 6999999999998776
Q ss_pred cccceEEEEEeecCCCChHHHHhhcC--------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCC
Q 035862 148 ERGIQRLLVYEYMPNRSLEDRLFSRA--------------QPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSN 213 (393)
Q Consensus 148 ~~~~~~~lv~e~~~~~~L~~~l~~~~--------------~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~N 213 (393)
..++||||+.+++|.+++.... ...+++..++.++.|++.||+|||+. |++||||||+|
T Consensus 98 ----~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp~N 170 (307)
T cd05098 98 ----PLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASK---KCIHRDLAARN 170 (307)
T ss_pred ----ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHHh
Confidence 4599999999999999996532 13478899999999999999999998 99999999999
Q ss_pred eEeCCCCceEEeeccCCccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHh-CCCccCCCCchh
Q 035862 214 VLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILT-GRRVLERNRPTM 292 (393)
Q Consensus 214 Ill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ellt-g~~pf~~~~~~~ 292 (393)
|+++.++.+||+|||++................++..|+|||.+.+..++.++|||||||++|+|++ |..||.......
T Consensus 171 ill~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~~~ 250 (307)
T cd05098 171 VLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE 250 (307)
T ss_pred eEEcCCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCHHH
Confidence 9999999999999999876533222111222234568999999988899999999999999999998 888886543221
Q ss_pred hhHHHHHHhhcCcCCcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhhc
Q 035862 293 EQKLLEWVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQESE 363 (393)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~~~~~~ 363 (393)
+....... .....+..++.++.+|+.+||..+|.+||++.++++.|+.+.....
T Consensus 251 ---~~~~~~~~--------------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~~~~ 304 (307)
T cd05098 251 ---LFKLLKEG--------------HRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILALTS 304 (307)
T ss_pred ---HHHHHHcC--------------CCCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHHHhh
Confidence 11111110 0111122345789999999999999999999999999999887543
No 114
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=1.8e-42 Score=327.55 Aligned_cols=258 Identities=22% Similarity=0.281 Sum_probs=202.5
Q ss_pred HhcCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCC---cccHHHHHHHHHHhhcCCCCccceeeeeeecC
Q 035862 70 ATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG---LQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTE 146 (393)
Q Consensus 70 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 146 (393)
..++|++.+.||+|+||.||+|.+..++ ..||+|.+.... ......+.+|+.+++.++||||+++++++...
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~-----~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~ 115 (370)
T cd05596 41 KAEDFDVIKVIGRGAFGEVQLVRHKSSK-----QVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDD 115 (370)
T ss_pred CHHHcEEEEEEeeCCCEEEEEEEECCCC-----CEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecC
Confidence 3567999999999999999999875443 469999986431 12234467899999999999999999988876
Q ss_pred CcccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEee
Q 035862 147 DERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSD 226 (393)
Q Consensus 147 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~D 226 (393)
+ ..++||||+++|+|.+++.. ..+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|
T Consensus 116 ~----~~~lv~Ey~~gg~L~~~l~~---~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~kL~D 185 (370)
T cd05596 116 K----YLYMVMEYMPGGDLVNLMSN---YDIPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLAD 185 (370)
T ss_pred C----EEEEEEcCCCCCcHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEcCCCCEEEEe
Confidence 6 56999999999999998843 3478889999999999999999998 999999999999999999999999
Q ss_pred ccCCccCCCCCCccccccccccCCccCccccccC----CCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhh
Q 035862 227 FGLAREGPTGDHTHVSTAVVGTYGYAAPEYIETG----HLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQ 302 (393)
Q Consensus 227 fg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~ 302 (393)
||++........ .......||+.|+|||++.+. .++.++|||||||++|||++|..||........ .......
T Consensus 186 fG~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~--~~~i~~~ 262 (370)
T cd05596 186 FGTCMKMDANGM-VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGT--YSKIMDH 262 (370)
T ss_pred ccceeeccCCCc-ccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHH--HHHHHcC
Confidence 999876433221 122346799999999998653 478999999999999999999999986543211 1111110
Q ss_pred cCcCCcccccccCcccccccCHHHHHHHHHHHHHhcccCCCC--CCCHHHHHHHHHH
Q 035862 303 FPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEE--RPTMNQVVESLKL 357 (393)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~--Rps~~~~l~~l~~ 357 (393)
... +.......++.++.+|+.+||+.+|.+ |+++.++++|.|.
T Consensus 263 ----~~~--------~~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h~~~ 307 (370)
T cd05596 263 ----KNS--------LTFPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSHPFF 307 (370)
T ss_pred ----CCc--------CCCCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcCccc
Confidence 000 000001124678999999999999987 9999999999764
No 115
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=5e-42 Score=312.67 Aligned_cols=250 Identities=28% Similarity=0.416 Sum_probs=198.0
Q ss_pred ecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcc---cHHHHHHHHHHhhcCCCCccceeeeeeecCCcccceEEEE
Q 035862 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQ---GHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLV 156 (393)
Q Consensus 80 lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv 156 (393)
||+|+||+||++.+..++ ..||+|.+...... ....+..|+.+++.++||||+++.+++.... ..++|
T Consensus 1 lg~G~~g~Vy~~~~~~~~-----~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~----~~~lv 71 (280)
T cd05608 1 LGKGGFGEVSACQMRATG-----KLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKT----DLCLV 71 (280)
T ss_pred CCCCCceeEEEEEEccCC-----cEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCC----eEEEE
Confidence 699999999999875443 46999998654222 2245678999999999999999999887765 56999
Q ss_pred EeecCCCChHHHHhh--cCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCCccCC
Q 035862 157 YEYMPNRSLEDRLFS--RAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGP 234 (393)
Q Consensus 157 ~e~~~~~~L~~~l~~--~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~ 234 (393)
|||+++++|..++.. .....+++..++.++.|++.||.|||+. +|+||||||+||+++.++.++|+|||++....
T Consensus 72 ~e~~~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~ 148 (280)
T cd05608 72 MTIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQR---RIIYRDLKPENVLLDNDGNVRISDLGLAVELK 148 (280)
T ss_pred EeCCCCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCccceecC
Confidence 999999999988753 2345689999999999999999999998 99999999999999999999999999987643
Q ss_pred CCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhh-HHHHHHhhcCcCCcccccc
Q 035862 235 TGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQ-KLLEWVKQFPADGKKFSMM 313 (393)
Q Consensus 235 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 313 (393)
.... ......|++.|+|||++.+..++.++|||||||++|+|++|+.||......... .... .....
T Consensus 149 ~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~---~~~~~------- 216 (280)
T cd05608 149 DGQS--KTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQ---RILND------- 216 (280)
T ss_pred CCCc--cccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHH---hhccc-------
Confidence 3221 123457899999999999999999999999999999999999999764332111 1111 00000
Q ss_pred cCcccccccCHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHHHHHH
Q 035862 314 IDPRLRNQYSINAARRVAKLADNCLKKNPEERP-----TMNQVVESLKLA 358 (393)
Q Consensus 314 ~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rp-----s~~~~l~~l~~~ 358 (393)
....+..++..+.+++.+||+.||++|| +++++++|.|.-
T Consensus 217 -----~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h~~~~ 261 (280)
T cd05608 217 -----SVTYPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTHPLFR 261 (280)
T ss_pred -----CCCCcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcChhhh
Confidence 0012223567899999999999999999 889999998763
No 116
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=1.7e-41 Score=320.15 Aligned_cols=274 Identities=25% Similarity=0.347 Sum_probs=203.1
Q ss_pred HhcCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCC--CcccHHHHHHHHHHhhcCCCCccceeeeeeecCC
Q 035862 70 ATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNH--GLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTED 147 (393)
Q Consensus 70 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 147 (393)
..++|++.+.||+|+||.||+|.+..+ +..||+|.+... .......+.+|+.+++.++||||+++++++....
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 93 (359)
T cd07876 19 VLKRYQQLKPIGSGAQGIVCAAFDTVL-----GINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQK 93 (359)
T ss_pred hhhceEEEEEeecCCCEEEEEEEEcCC-----CceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCC
Confidence 457899999999999999999986543 346999998653 2233456778999999999999999999986554
Q ss_pred cc--cceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEe
Q 035862 148 ER--GIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLS 225 (393)
Q Consensus 148 ~~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~ 225 (393)
.. ....|+||||+.+ +|.+.+. ..+++..+..++.|++.||.|||++ ||+||||||+|||++.+|.+||+
T Consensus 94 ~~~~~~~~~lv~e~~~~-~l~~~~~----~~~~~~~~~~~~~qi~~~L~~LH~~---~ivHrDlkp~NIl~~~~~~~kl~ 165 (359)
T cd07876 94 SLEEFQDVYLVMELMDA-NLCQVIH----MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKIL 165 (359)
T ss_pred CccccceeEEEEeCCCc-CHHHHHh----ccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEe
Confidence 21 1246999999965 6766652 2478889999999999999999999 99999999999999999999999
Q ss_pred eccCCccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhH-HH-------
Q 035862 226 DFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQK-LL------- 297 (393)
Q Consensus 226 Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~-~~------- 297 (393)
|||++....... ......||+.|+|||++.+..++.++|||||||++|+|++|+.||...+...... ..
T Consensus 166 Dfg~a~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~ 242 (359)
T cd07876 166 DFGLARTACTNF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPS 242 (359)
T ss_pred cCCCccccccCc---cCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCc
Confidence 999997543221 2234578999999999999999999999999999999999999997654321100 00
Q ss_pred ------------HHHhhcCc-CCcccccccCccc---ccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHH
Q 035862 298 ------------EWVKQFPA-DGKKFSMMIDPRL---RNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAV 359 (393)
Q Consensus 298 ------------~~~~~~~~-~~~~~~~~~~~~~---~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~~ 359 (393)
.+....+. .+..+........ ........+.++.+|+.+||+.||++|||+.++++|.|...
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~ 320 (359)
T cd07876 243 AEFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHPYITV 320 (359)
T ss_pred HHHHHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcCchhhh
Confidence 00000000 0000000000000 00011123567899999999999999999999999998753
No 117
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=8e-42 Score=308.07 Aligned_cols=254 Identities=29% Similarity=0.433 Sum_probs=203.3
Q ss_pred cCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcccHHHHHHHHHHhhcCCCCccceeeeeeecCCcccc
Q 035862 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGI 151 (393)
Q Consensus 72 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 151 (393)
++|++.++||+|+||.||+|.+... ..|++|.+.... .....+.+|+.+++.++|+||+++++.+...+
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~------~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~---- 74 (261)
T cd05072 6 ESIKLVKKLGAGQFGEVWMGYYNNS------TKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVTKEE---- 74 (261)
T ss_pred HHeEEeeecCCcCCceEEEEEecCC------ceEEEEEccCCc-hhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC----
Confidence 5699999999999999999985422 248999876543 23567889999999999999999999887665
Q ss_pred eEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCCc
Q 035862 152 QRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAR 231 (393)
Q Consensus 152 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~ 231 (393)
..+++|||+.+++|.+++.......+++..++.++.|++.||+|||+. +++||||||+||+++.++.++|+|||++.
T Consensus 75 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~ 151 (261)
T cd05072 75 PIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERK---NYIHRDLRAANVLVSESLMCKIADFGLAR 151 (261)
T ss_pred CcEEEEecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEecCCCcEEECCCccce
Confidence 459999999999999999766666788999999999999999999998 99999999999999999999999999998
Q ss_pred cCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHh-CCCccCCCCchhhhHHHHHHhhcCcCCccc
Q 035862 232 EGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILT-GRRVLERNRPTMEQKLLEWVKQFPADGKKF 310 (393)
Q Consensus 232 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (393)
........ ......++..|+|||++.+..++.++|||||||++|+|++ |..||........ ........
T Consensus 152 ~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~---~~~~~~~~------ 221 (261)
T cd05072 152 VIEDNEYT-AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDV---MSALQRGY------ 221 (261)
T ss_pred ecCCCcee-ccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHH---HHHHHcCC------
Confidence 65432211 1223345678999999988889999999999999999998 9999975433221 11111100
Q ss_pred ccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 035862 311 SMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKL 357 (393)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~ 357 (393)
.......++.++.+++.+||..+|++||++.++++.|+.
T Consensus 222 --------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 260 (261)
T cd05072 222 --------RMPRMENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDD 260 (261)
T ss_pred --------CCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 000111245778999999999999999999999998875
No 118
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=6.5e-42 Score=316.44 Aligned_cols=272 Identities=22% Similarity=0.363 Sum_probs=203.5
Q ss_pred cCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCc-ccHHHHHHHHHHhhcCCCCccceeeeeeecCCccc
Q 035862 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL-QGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERG 150 (393)
Q Consensus 72 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 150 (393)
++|.+.+.||+|+||.||+|++..++ ..||+|.+..... .....+.+|+.+++.++||||+++++++..++
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--- 77 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTE-----NLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDK--- 77 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCC-----CeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCC---
Confidence 56999999999999999999865433 4699998875432 22345678999999999999999999998766
Q ss_pred ceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCC
Q 035862 151 IQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLA 230 (393)
Q Consensus 151 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a 230 (393)
..++||||+.+ +|.+++... ...+++..++.++.|++.||.|||++ ||+||||||+|||++.++.+||+|||++
T Consensus 78 -~~~lv~e~~~~-~l~~~~~~~-~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~ 151 (309)
T cd07872 78 -SLTLVFEYLDK-DLKQYMDDC-GNIMSMHNVKIFLYQILRGLAYCHRR---KVLHRDLKPQNLLINERGELKLADFGLA 151 (309)
T ss_pred -eEEEEEeCCCC-CHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECccccc
Confidence 56999999965 888887543 34578899999999999999999998 9999999999999999999999999998
Q ss_pred ccCCCCCCccccccccccCCccCcccccc-CCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcCC--
Q 035862 231 REGPTGDHTHVSTAVVGTYGYAAPEYIET-GHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADG-- 307 (393)
Q Consensus 231 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~-- 307 (393)
........ ......+++.|+|||.+.+ ..++.++|||||||++|+|++|+.||..................+...
T Consensus 152 ~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 229 (309)
T cd07872 152 RAKSVPTK--TYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETW 229 (309)
T ss_pred eecCCCcc--ccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHH
Confidence 75432221 1233467899999998865 568999999999999999999999997665433222111111111000
Q ss_pred ------cccccccCccccc----ccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHH
Q 035862 308 ------KKFSMMIDPRLRN----QYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAV 359 (393)
Q Consensus 308 ------~~~~~~~~~~~~~----~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~~ 359 (393)
..+.....+.... .....++.++.+|+.+||+.||.+|||+.++++|.|...
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~ 291 (309)
T cd07872 230 PGISSNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKHAYFRS 291 (309)
T ss_pred hhhcchhhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcChhhhh
Confidence 0000000000000 011135678899999999999999999999999988753
No 119
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=1.9e-42 Score=320.83 Aligned_cols=246 Identities=24% Similarity=0.386 Sum_probs=193.6
Q ss_pred ceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCC---cccHHHHHHHHHHhhc-CCCCccceeeeeeecCCcccceE
Q 035862 78 LKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG---LQGHKQWLAEVQFLGV-VSHPNLVKLLGYCSTEDERGIQR 153 (393)
Q Consensus 78 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~-l~h~niv~~~~~~~~~~~~~~~~ 153 (393)
+.||+|+||.||+|.+..++ ..||+|.+.... .........|..++.. .+||||+++++++...+ +.
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~-----~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~----~~ 71 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKG-----EYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKE----HL 71 (316)
T ss_pred CeeeeCCCeEEEEEEECCCC-----CEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCC----EE
Confidence 36999999999999975443 469999987532 1233455677777765 47999999999998766 56
Q ss_pred EEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCCccC
Q 035862 154 LLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREG 233 (393)
Q Consensus 154 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~ 233 (393)
++||||+.+++|..++.. ...+++..+..++.|++.||+|||++ ||+||||||+|||++.++.+||+|||++...
T Consensus 72 ~lv~E~~~~g~L~~~i~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~ 146 (316)
T cd05620 72 FFVMEFLNGGDLMFHIQD--KGRFDLYRATFYAAEIVCGLQFLHSK---GIIYRDLKLDNVMLDRDGHIKIADFGMCKEN 146 (316)
T ss_pred EEEECCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEeCccCCCeec
Confidence 999999999999998843 35688999999999999999999998 9999999999999999999999999998753
Q ss_pred CCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcCCcccccc
Q 035862 234 PTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKFSMM 313 (393)
Q Consensus 234 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (393)
..... ......||+.|+|||++.+..++.++|||||||++|+|++|..||....... ........ .
T Consensus 147 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~---~~~~~~~~---~------ 212 (316)
T cd05620 147 VFGDN--RASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDE---LFESIRVD---T------ 212 (316)
T ss_pred ccCCC--ceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHH---HHHHHHhC---C------
Confidence 22211 2345679999999999999999999999999999999999999997654321 11111100 0
Q ss_pred cCcccccccCHHHHHHHHHHHHHhcccCCCCCCCH-HHHHHHHHH
Q 035862 314 IDPRLRNQYSINAARRVAKLADNCLKKNPEERPTM-NQVVESLKL 357 (393)
Q Consensus 314 ~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~-~~~l~~l~~ 357 (393)
...+..++.++.+++.+||+.||++||++ .++++|.+.
T Consensus 213 ------~~~~~~~~~~~~~li~~~l~~dP~~R~~~~~~~~~h~~f 251 (316)
T cd05620 213 ------PHYPRWITKESKDILEKLFERDPTRRLGVVGNIRGHPFF 251 (316)
T ss_pred ------CCCCCCCCHHHHHHHHHHccCCHHHcCCChHHHHcCCCc
Confidence 01111245778999999999999999997 577777554
No 120
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=2.2e-42 Score=320.69 Aligned_cols=246 Identities=27% Similarity=0.406 Sum_probs=196.1
Q ss_pred ceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCC---cccHHHHHHHHHHhhcC-CCCccceeeeeeecCCcccceE
Q 035862 78 LKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG---LQGHKQWLAEVQFLGVV-SHPNLVKLLGYCSTEDERGIQR 153 (393)
Q Consensus 78 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~ 153 (393)
+.||+|+||+||+|.+..++ ..||+|.+.+.. ......+..|..++..+ +||||+++++++...+ ..
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~-----~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~----~~ 71 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTD-----ELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKD----RL 71 (318)
T ss_pred CeeeeCCCeEEEEEEECCCC-----CEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCC----EE
Confidence 36999999999999875443 459999987532 22344567788888877 6999999999988766 56
Q ss_pred EEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCCccC
Q 035862 154 LLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREG 233 (393)
Q Consensus 154 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~ 233 (393)
++||||+++++|..++.. ...+++..+..++.|++.||.|||+. +++||||||+||++++++.+||+|||++...
T Consensus 72 ~lv~e~~~~~~L~~~~~~--~~~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~ 146 (318)
T cd05570 72 FFVMEYVNGGDLMFHIQR--SGRFDEPRARFYAAEIVLGLQFLHER---GIIYRDLKLDNVLLDSEGHIKIADFGMCKEG 146 (318)
T ss_pred EEEEcCCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEccCCCHHHeEECCCCcEEecccCCCeec
Confidence 999999999999988843 34689999999999999999999998 9999999999999999999999999998653
Q ss_pred CCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcCCcccccc
Q 035862 234 PTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKFSMM 313 (393)
Q Consensus 234 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (393)
..... .....+|++.|+|||++.+..++.++|||||||++|+|++|..||........ ....... .
T Consensus 147 ~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~---~~~i~~~---~------ 212 (318)
T cd05570 147 ILGGV--TTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDEL---FQSILED---E------ 212 (318)
T ss_pred CcCCC--cccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHH---HHHHHcC---C------
Confidence 22211 12345789999999999999999999999999999999999999976543211 1111100 0
Q ss_pred cCcccccccCHHHHHHHHHHHHHhcccCCCCCCCH-----HHHHHHHHH
Q 035862 314 IDPRLRNQYSINAARRVAKLADNCLKKNPEERPTM-----NQVVESLKL 357 (393)
Q Consensus 314 ~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~-----~~~l~~l~~ 357 (393)
...+..++..+.+|+.+||..||.+||++ .+++++.|.
T Consensus 213 ------~~~~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~~~~ 255 (318)
T cd05570 213 ------VRYPRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGHPFF 255 (318)
T ss_pred ------CCCCCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcCCCc
Confidence 01122345788999999999999999999 999998654
No 121
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=6.4e-42 Score=308.64 Aligned_cols=255 Identities=29% Similarity=0.468 Sum_probs=207.6
Q ss_pred hcCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcccHHHHHHHHHHhhcCCCCccceeeeeeecCCccc
Q 035862 71 TNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERG 150 (393)
Q Consensus 71 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 150 (393)
..+|++.+.||.|+||.||+|.+.. ...+++|.+..........+..|+.+++.++||||+++++++...+
T Consensus 5 ~~~y~~~~~ig~g~~~~vy~~~~~~------~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--- 75 (261)
T cd05148 5 REEFTLERKLGSGYFGEVWEGLWKN------RVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGE--- 75 (261)
T ss_pred HHHHHHhhhhccCCCccEEEeEecC------CCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCC---
Confidence 3468899999999999999999754 2359999988766555677889999999999999999999988776
Q ss_pred ceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCC
Q 035862 151 IQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLA 230 (393)
Q Consensus 151 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a 230 (393)
..++||||+.+++|.+++.......+++..++.++.|++.||.|||++ |++|+||+|+||++++++.+||+|||.+
T Consensus 76 -~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~h~dl~~~nilv~~~~~~kl~d~g~~ 151 (261)
T cd05148 76 -PVYIITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQ---NSIHRDLAARNILVGEDLVCKVADFGLA 151 (261)
T ss_pred -CeEEEEeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccCcceEEEcCCceEEEccccch
Confidence 459999999999999999766666789999999999999999999998 9999999999999999999999999999
Q ss_pred ccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHh-CCCccCCCCchhhhHHHHHHhhcCcCCcc
Q 035862 231 REGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILT-GRRVLERNRPTMEQKLLEWVKQFPADGKK 309 (393)
Q Consensus 231 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 309 (393)
........ ......++..|+|||.+.+..++.++||||||+++|+|++ |..||.......... .....
T Consensus 152 ~~~~~~~~--~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~--~~~~~------- 220 (261)
T cd05148 152 RLIKEDVY--LSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYD--QITAG------- 220 (261)
T ss_pred hhcCCccc--cccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHHH--HHHhC-------
Confidence 76533221 1223345678999999988899999999999999999998 899997654321111 11111
Q ss_pred cccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 035862 310 FSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKL 357 (393)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~ 357 (393)
.....+..++..+.+++.+||+.||.+|||+.++++.|+.
T Consensus 221 --------~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~ 260 (261)
T cd05148 221 --------YRMPCPAKCPQEIYKIMLECWAAEPEDRPSFKALREELDN 260 (261)
T ss_pred --------CcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhc
Confidence 0111122345788999999999999999999999999875
No 122
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=6.5e-42 Score=325.37 Aligned_cols=266 Identities=25% Similarity=0.395 Sum_probs=207.3
Q ss_pred hcCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCc-ccHHHHHHHHHHhhcCC-CCccceeeeeeecCCc
Q 035862 71 TNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL-QGHKQWLAEVQFLGVVS-HPNLVKLLGYCSTEDE 148 (393)
Q Consensus 71 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~ 148 (393)
.++|.+.+.||+|+||.||+|++...........||+|++..... .....+.+|+.+|..+. ||||+++++++...+
T Consensus 36 ~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~- 114 (401)
T cd05107 36 RDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGG- 114 (401)
T ss_pred HHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCC-
Confidence 345888899999999999999986544444566799999975432 22346788999999998 999999999998766
Q ss_pred ccceEEEEEeecCCCChHHHHhhcC-------------------------------------------------------
Q 035862 149 RGIQRLLVYEYMPNRSLEDRLFSRA------------------------------------------------------- 173 (393)
Q Consensus 149 ~~~~~~lv~e~~~~~~L~~~l~~~~------------------------------------------------------- 173 (393)
..++||||+.+|+|.+++....
T Consensus 115 ---~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (401)
T cd05107 115 ---PIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVP 191 (401)
T ss_pred ---CcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccc
Confidence 4599999999999999985421
Q ss_pred -----------------------------------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCC
Q 035862 174 -----------------------------------------QPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTS 212 (393)
Q Consensus 174 -----------------------------------------~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~ 212 (393)
...+++..++.++.|++.||.|||+. +++||||||+
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrdlkp~ 268 (401)
T cd05107 192 MQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASK---NCVHRDLAAR 268 (401)
T ss_pred hhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcC---CcCcccCCcc
Confidence 12356777889999999999999998 9999999999
Q ss_pred CeEeCCCCceEEeeccCCccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHh-CCCccCCCCch
Q 035862 213 NVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILT-GRRVLERNRPT 291 (393)
Q Consensus 213 NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ellt-g~~pf~~~~~~ 291 (393)
|||+++++.+||+|||++................++..|+|||.+.+..++.++|||||||++|||++ |..||......
T Consensus 269 NiLl~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~ 348 (401)
T cd05107 269 NVLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMN 348 (401)
T ss_pred eEEEeCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCch
Confidence 99999999999999999975433222112223456788999999998889999999999999999998 88898654322
Q ss_pred hhhHHHHHHhhcCcCCcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHH
Q 035862 292 MEQKLLEWVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAV 359 (393)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~~ 359 (393)
.. ....... ..+...+..++.++.+|+.+||..+|.+||++.++++.|..++
T Consensus 349 ~~--~~~~~~~--------------~~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~~ 400 (401)
T cd05107 349 EQ--FYNAIKR--------------GYRMAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDLL 400 (401)
T ss_pred HH--HHHHHHc--------------CCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence 11 1111100 0011112234678999999999999999999999999998875
No 123
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=2.6e-42 Score=321.67 Aligned_cols=249 Identities=24% Similarity=0.372 Sum_probs=195.9
Q ss_pred ceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCC---cccHHHHHHHHHHhhcC-CCCccceeeeeeecCCcccceE
Q 035862 78 LKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG---LQGHKQWLAEVQFLGVV-SHPNLVKLLGYCSTEDERGIQR 153 (393)
Q Consensus 78 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~ 153 (393)
+.||+|+||.||+|.+..++ ..||+|.+.... ......+..|..++..+ +||||+++++++...+ .+
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~-----~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~----~~ 71 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTR-----RIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTES----RL 71 (329)
T ss_pred CeEeeCCCeEEEEEEECCCC-----CEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCC----EE
Confidence 36999999999999975443 469999987532 22334567899999888 6999999999998776 56
Q ss_pred EEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCCccC
Q 035862 154 LLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREG 233 (393)
Q Consensus 154 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~ 233 (393)
++||||+++++|.+++. ....+++..++.++.||+.||.|||++ |++||||||+|||++.++.+||+|||++...
T Consensus 72 ~lv~e~~~~g~L~~~~~--~~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~ 146 (329)
T cd05588 72 FFVIEFVSGGDLMFHMQ--RQRKLPEEHARFYSAEISLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTDYGMCKEG 146 (329)
T ss_pred EEEEeCCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEECcCcccccc
Confidence 99999999999998884 345689999999999999999999998 9999999999999999999999999998743
Q ss_pred CCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCch------hhhHHHHHHhhcCcCC
Q 035862 234 PTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPT------MEQKLLEWVKQFPADG 307 (393)
Q Consensus 234 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~------~~~~~~~~~~~~~~~~ 307 (393)
..... ......||+.|+|||++.+..++.++|||||||++|+|++|+.||...... ...........
T Consensus 147 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~----- 219 (329)
T cd05588 147 IRPGD--TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILE----- 219 (329)
T ss_pred ccCCC--ccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHc-----
Confidence 22111 223467999999999999999999999999999999999999999632111 01111111110
Q ss_pred cccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCC------HHHHHHHHHH
Q 035862 308 KKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPT------MNQVVESLKL 357 (393)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps------~~~~l~~l~~ 357 (393)
.. ...+..++.++.+++.+||+.||.+|++ +.++++|.|.
T Consensus 220 --------~~--~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~hp~~ 265 (329)
T cd05588 220 --------KQ--IRIPRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSHPFF 265 (329)
T ss_pred --------CC--CCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcCCCC
Confidence 00 0112234577899999999999999987 7899998765
No 124
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=2.5e-42 Score=321.12 Aligned_cols=250 Identities=26% Similarity=0.393 Sum_probs=197.6
Q ss_pred CCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCc---ccHHHHHHHHHHhhcCC-CCccceeeeeeecCCc
Q 035862 73 GFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL---QGHKQWLAEVQFLGVVS-HPNLVKLLGYCSTEDE 148 (393)
Q Consensus 73 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~ 148 (393)
+|.+.+.||+|+||.||+|.+..++ ..||+|.+.+... ........|..++..+. |++|+++++++...+
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~-----~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~- 74 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTD-----ELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMD- 74 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCC-----CEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCC-
Confidence 4888999999999999999865433 4699999875421 22334566788887774 899999999887766
Q ss_pred ccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeecc
Q 035862 149 RGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFG 228 (393)
Q Consensus 149 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg 228 (393)
.+++||||+++|+|.+++.. ...+++..+..++.||+.||.|||+. +|+||||||+|||+++++.+||+|||
T Consensus 75 ---~~~lv~E~~~~g~L~~~~~~--~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kL~DfG 146 (323)
T cd05616 75 ---RLYFVMEYVNGGDLMYQIQQ--VGRFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIADFG 146 (323)
T ss_pred ---EEEEEEcCCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC---CEEecCCCHHHeEECCCCcEEEccCC
Confidence 56999999999999998843 34688999999999999999999998 99999999999999999999999999
Q ss_pred CCccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcCCc
Q 035862 229 LAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGK 308 (393)
Q Consensus 229 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 308 (393)
++........ ......||+.|+|||++.+..++.++|||||||++|||++|..||........ .......
T Consensus 147 ~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~--~~~i~~~------ 216 (323)
T cd05616 147 MCKENMWDGV--TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDEL--FQSIMEH------ 216 (323)
T ss_pred CceecCCCCC--ccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHHH--HHHHHhC------
Confidence 9875322211 22346799999999999999999999999999999999999999976543211 1111110
Q ss_pred ccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCH-----HHHHHHHH
Q 035862 309 KFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTM-----NQVVESLK 356 (393)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~-----~~~l~~l~ 356 (393)
...++...+.++.+++.+||+.||.+|++. .++++|.+
T Consensus 217 ----------~~~~p~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~ 259 (323)
T cd05616 217 ----------NVAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAF 259 (323)
T ss_pred ----------CCCCCCcCCHHHHHHHHHHcccCHHhcCCCCCCCHHHHhcCCC
Confidence 001122356788999999999999999984 78887744
No 125
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=3.8e-42 Score=318.64 Aligned_cols=245 Identities=25% Similarity=0.405 Sum_probs=193.2
Q ss_pred ceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCC---cccHHHHHHHHHHhhc-CCCCccceeeeeeecCCcccceE
Q 035862 78 LKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG---LQGHKQWLAEVQFLGV-VSHPNLVKLLGYCSTEDERGIQR 153 (393)
Q Consensus 78 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~-l~h~niv~~~~~~~~~~~~~~~~ 153 (393)
+.||+|+||.||+|.+..++ ..||+|.+.... .........|..++.. ++||||+++++++.+.+ ..
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~----~~ 71 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTN-----QFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKE----NL 71 (316)
T ss_pred CeeeeCCCEEEEEEEECCCC-----CEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCC----EE
Confidence 36999999999999975443 469999987542 1233445667777776 48999999999998776 56
Q ss_pred EEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCCccC
Q 035862 154 LLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREG 233 (393)
Q Consensus 154 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~ 233 (393)
++||||+++++|.+++.. ...+++..+..++.|++.||.|||+. +++||||||+|||++.++.+||+|||++...
T Consensus 72 ~lv~ey~~~g~L~~~l~~--~~~~~~~~~~~~~~qi~~al~~LH~~---~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~ 146 (316)
T cd05619 72 FFVMEYLNGGDLMFHIQS--CHKFDLPRATFYAAEIICGLQFLHSK---GIVYRDLKLDNILLDTDGHIKIADFGMCKEN 146 (316)
T ss_pred EEEEeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEccCCcceEC
Confidence 999999999999998843 34688999999999999999999998 9999999999999999999999999998753
Q ss_pred CCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcCCcccccc
Q 035862 234 PTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKFSMM 313 (393)
Q Consensus 234 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (393)
..... ......||+.|+|||++.+..++.++|||||||++|+|++|..||........ ...... ..
T Consensus 147 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~---~~~i~~---~~------ 212 (316)
T cd05619 147 MLGDA--KTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEEL---FQSIRM---DN------ 212 (316)
T ss_pred CCCCC--ceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHH---HHHHHh---CC------
Confidence 22221 22345789999999999999999999999999999999999999976543211 111110 00
Q ss_pred cCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHH-HHHHHHH
Q 035862 314 IDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMN-QVVESLK 356 (393)
Q Consensus 314 ~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~-~~l~~l~ 356 (393)
...+..++.++.+|+.+||+.||++||++. ++++|.+
T Consensus 213 ------~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~h~~ 250 (316)
T cd05619 213 ------PCYPRWLTREAKDILVKLFVREPERRLGVKGDIRQHPF 250 (316)
T ss_pred ------CCCCccCCHHHHHHHHHHhccCHhhcCCChHHHHcCcc
Confidence 011123457789999999999999999996 7877755
No 126
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=2.4e-42 Score=326.36 Aligned_cols=262 Identities=22% Similarity=0.290 Sum_probs=203.0
Q ss_pred HHHHhcCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCC---cccHHHHHHHHHHhhcCCCCccceeeeee
Q 035862 67 LREATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG---LQGHKQWLAEVQFLGVVSHPNLVKLLGYC 143 (393)
Q Consensus 67 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~ 143 (393)
+....++|++.+.||+|+||.||+|.+..++ ..+|+|.+.+.. ......+.+|+.+++.++||||+++++++
T Consensus 38 ~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~-----~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~ 112 (370)
T cd05621 38 LQMKAEDYDVVKVIGRGAFGEVQLVRHKSSQ-----KVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAF 112 (370)
T ss_pred cCCCHHHCeEEEEEEecCCeEEEEEEECCCC-----CEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEE
Confidence 3344578999999999999999999975443 469999986421 12234567899999999999999999999
Q ss_pred ecCCcccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceE
Q 035862 144 STEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPK 223 (393)
Q Consensus 144 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~k 223 (393)
...+ ..++||||+++|+|.+++.. ..+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+|
T Consensus 113 ~~~~----~~~lv~Ey~~gg~L~~~l~~---~~~~~~~~~~~~~qil~aL~~LH~~---~IvHrDLKp~NILl~~~~~~k 182 (370)
T cd05621 113 QDDK----YLYMVMEYMPGGDLVNLMSN---YDVPEKWAKFYTAEVVLALDAIHSM---GLIHRDVKPDNMLLDKHGHLK 182 (370)
T ss_pred EcCC----EEEEEEcCCCCCcHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEE
Confidence 8766 56999999999999998843 2478999999999999999999998 999999999999999999999
Q ss_pred EeeccCCccCCCCCCccccccccccCCccCccccccC----CCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHH
Q 035862 224 LSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIETG----HLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEW 299 (393)
Q Consensus 224 l~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~ 299 (393)
|+|||++........ .......||+.|+|||++.+. .++.++|||||||++|+|++|..||........ ....
T Consensus 183 L~DFG~a~~~~~~~~-~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~--~~~i 259 (370)
T cd05621 183 LADFGTCMKMDETGM-VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGT--YSKI 259 (370)
T ss_pred EEecccceecccCCc-eecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHH--HHHH
Confidence 999999976533221 122456799999999998654 378899999999999999999999976543221 1111
Q ss_pred HhhcCcCCcccccccCcccccccCHHHHHHHHHHHHHhcccCCCC--CCCHHHHHHHHHHH
Q 035862 300 VKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEE--RPTMNQVVESLKLA 358 (393)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~--Rps~~~~l~~l~~~ 358 (393)
... .. .+.......++..+.+++..||..++.+ |+++.++++|.|..
T Consensus 260 ~~~----~~--------~~~~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~hp~~~ 308 (370)
T cd05621 260 MDH----KN--------SLNFPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQHPFFK 308 (370)
T ss_pred HhC----Cc--------ccCCCCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcCcccC
Confidence 110 00 0000111234678899999999855543 89999999998864
No 127
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=9.3e-43 Score=325.05 Aligned_cols=257 Identities=23% Similarity=0.272 Sum_probs=202.6
Q ss_pred cCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCc---ccHHHHHHHHHHhhcCCCCccceeeeeeecCCc
Q 035862 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL---QGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDE 148 (393)
Q Consensus 72 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 148 (393)
++|.+.+.||+|+||+||+|.+..++ ..||+|.+..... .....+.+|+.+++.++||||+++++++...+
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~-----~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~- 74 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATG-----DIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKD- 74 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCC-----CEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCC-
Confidence 46999999999999999999865433 4699999875422 23455778999999999999999999887765
Q ss_pred ccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeecc
Q 035862 149 RGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFG 228 (393)
Q Consensus 149 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg 228 (393)
..++||||+++++|.+++... ...+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||
T Consensus 75 ---~~~lv~e~~~~~~L~~~l~~~-~~~l~~~~~~~~~~qi~~aL~~lH~~---~i~H~Dlkp~NIll~~~~~~kL~Dfg 147 (330)
T cd05601 75 ---NLYLVMEYQPGGDLLSLLNRY-EDQFDEDMAQFYLAELVLAIHSVHQM---GYVHRDIKPENVLIDRTGHIKLADFG 147 (330)
T ss_pred ---eEEEEECCCCCCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEcccCchHheEECCCCCEEeccCC
Confidence 569999999999999998543 24689999999999999999999998 99999999999999999999999999
Q ss_pred CCccCCCCCCccccccccccCCccCccccc------cCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhh
Q 035862 229 LAREGPTGDHTHVSTAVVGTYGYAAPEYIE------TGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQ 302 (393)
Q Consensus 229 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~ 302 (393)
++......... ......||+.|+|||++. ...++.++|||||||++|+|++|..||........ +......
T Consensus 148 ~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~--~~~i~~~ 224 (330)
T cd05601 148 SAARLTANKMV-NSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKT--YNNIMNF 224 (330)
T ss_pred CCeECCCCCce-eeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHH--HHHHHcC
Confidence 99765433221 223457899999999986 45678999999999999999999999976543221 1111100
Q ss_pred cCcCCcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 035862 303 FPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKL 357 (393)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~ 357 (393)
.. .........++.++.+|+.+||+ +|.+||++.+++.|.|.
T Consensus 225 ----~~--------~~~~~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h~~~ 266 (330)
T cd05601 225 ----QR--------FLKFPEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCCHPFF 266 (330)
T ss_pred ----CC--------ccCCCCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCCCCc
Confidence 00 00000111245778999999998 99999999999999764
No 128
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=5.7e-42 Score=322.92 Aligned_cols=274 Identities=24% Similarity=0.312 Sum_probs=203.5
Q ss_pred HHhcCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCC--cccHHHHHHHHHHhhcCCCCccceeeeeeecC
Q 035862 69 EATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG--LQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTE 146 (393)
Q Consensus 69 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 146 (393)
...++|++.+.||+|+||.||+|.+... +..||+|.+.... ......+.+|+.+++.++||||+++++++...
T Consensus 14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~-----~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 88 (355)
T cd07874 14 TVLKRYQNLKPIGSGAQGIVCAAYDAVL-----DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQ 88 (355)
T ss_pred hhhhceeEEEEeeecCCEEEEEEEecCC-----CceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeecc
Confidence 3467899999999999999999986533 3459999987542 23345677899999999999999999988654
Q ss_pred Cc--ccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEE
Q 035862 147 DE--RGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKL 224 (393)
Q Consensus 147 ~~--~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl 224 (393)
.. .....++||||+++ +|.+.+. ..+++..++.++.|++.||.|||++ ||+||||||+|||++.++.+||
T Consensus 89 ~~~~~~~~~~lv~e~~~~-~l~~~~~----~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDikp~Nill~~~~~~kl 160 (355)
T cd07874 89 KSLEEFQDVYLVMELMDA-NLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKI 160 (355)
T ss_pred ccccccceeEEEhhhhcc-cHHHHHh----hcCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEECCCCCEEE
Confidence 42 11246999999965 7777663 2478889999999999999999998 9999999999999999999999
Q ss_pred eeccCCccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhH-HHH-----
Q 035862 225 SDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQK-LLE----- 298 (393)
Q Consensus 225 ~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~-~~~----- 298 (393)
+|||+++...... ......||+.|+|||++.+..++.++|||||||++|+|++|+.||.......... ...
T Consensus 161 ~Dfg~~~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~ 237 (355)
T cd07874 161 LDFGLARTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 237 (355)
T ss_pred eeCcccccCCCcc---ccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCC
Confidence 9999997643321 2234578999999999999999999999999999999999999997654321110 000
Q ss_pred ----------HHhhcCcCCcc-----cccccCccc---ccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q 035862 299 ----------WVKQFPADGKK-----FSMMIDPRL---RNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLA 358 (393)
Q Consensus 299 ----------~~~~~~~~~~~-----~~~~~~~~~---~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~ 358 (393)
....+...... +........ ........+.++.+||.+||+.||++|||+.++++|.|..
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~hp~~~ 315 (355)
T cd07874 238 CPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQHPYIN 315 (355)
T ss_pred CHHHHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcCcchh
Confidence 00000000000 000000000 0011112356789999999999999999999999998775
No 129
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=2.4e-41 Score=308.05 Aligned_cols=264 Identities=25% Similarity=0.387 Sum_probs=205.7
Q ss_pred cCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCc-ccHHHHHHHHHHhhcCCCCccceeeeeeecCCccc
Q 035862 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL-QGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERG 150 (393)
Q Consensus 72 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 150 (393)
++|++.+.||+|+||+||+|.+..++. .....||+|.+..... .....+.+|+.++..++||||+++++++....
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~-~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~--- 82 (279)
T cd05109 7 TELKKVKVLGSGAFGTVYKGIWIPDGE-NVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLTST--- 82 (279)
T ss_pred hheeeeeecCCCCCceEEEEEEecCCC-ccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcCCC---
Confidence 568999999999999999998764432 2334589999875432 33456788999999999999999999886543
Q ss_pred ceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCC
Q 035862 151 IQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLA 230 (393)
Q Consensus 151 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a 230 (393)
.+++|||+++|+|.+++... ...+++..++.++.|++.||.|||++ +++||||||+|||+++++.+||+|||++
T Consensus 83 --~~l~~~~~~~g~l~~~l~~~-~~~~~~~~~~~~~~qi~~~L~~lH~~---~iiH~dlkp~Nil~~~~~~~kL~dfG~~ 156 (279)
T cd05109 83 --VQLVTQLMPYGCLLDYVREN-KDRIGSQDLLNWCVQIAKGMSYLEEV---RLVHRDLAARNVLVKSPNHVKITDFGLA 156 (279)
T ss_pred --cEEEEEcCCCCCHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccccceEEEcCCCcEEECCCCce
Confidence 37899999999999998543 34589999999999999999999999 9999999999999999999999999999
Q ss_pred ccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHh-CCCccCCCCchhhhHHHHHHhhcCcCCcc
Q 035862 231 REGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILT-GRRVLERNRPTMEQKLLEWVKQFPADGKK 309 (393)
Q Consensus 231 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 309 (393)
................++..|+|||.+.+..++.++|||||||++|||++ |..||........ ....... .
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~---~~~~~~~----~- 228 (279)
T cd05109 157 RLLDIDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREI---PDLLEKG----E- 228 (279)
T ss_pred eecccccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHH---HHHHHCC----C-
Confidence 86543322211222345678999999998899999999999999999998 8899865433221 1111110 0
Q ss_pred cccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhh
Q 035862 310 FSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQES 362 (393)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~~~~~ 362 (393)
....+..++.++.+++.+||+.||++||++.++++.+..+.+..
T Consensus 229 ---------~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~~~ 272 (279)
T cd05109 229 ---------RLPQPPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMARDP 272 (279)
T ss_pred ---------cCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhcCC
Confidence 00111234577899999999999999999999999988776543
No 130
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=2.5e-41 Score=306.67 Aligned_cols=262 Identities=26% Similarity=0.427 Sum_probs=200.5
Q ss_pred CcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCC--cccHHHHHHHHHHhhcCCCCccceeeeeeecCCc--c
Q 035862 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG--LQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDE--R 149 (393)
Q Consensus 74 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~--~ 149 (393)
|.+.+.||+|+||.||+|.+.... ....+|+|.+.... ......+.+|+.+++.++||||+++++++..... .
T Consensus 1 ~~i~~~ig~G~~g~V~~~~~~~~~---~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 77 (272)
T cd05075 1 LALGKTLGEGEFGSVMEGQLNQDD---SILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEG 77 (272)
T ss_pred CccccccCcccCceEEEeEEccCC---CeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccC
Confidence 346678999999999999875332 33468999876542 2334567889999999999999999998754321 1
Q ss_pred cceEEEEEeecCCCChHHHHhhc----CCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEe
Q 035862 150 GIQRLLVYEYMPNRSLEDRLFSR----AQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLS 225 (393)
Q Consensus 150 ~~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~ 225 (393)
....+++|||+.+++|.+++... ....+++..+..++.|++.||.|||++ +|+||||||+|||+++++.+||+
T Consensus 78 ~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~ 154 (272)
T cd05075 78 YPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSK---SFIHRDLAARNCMLNENMNVCVA 154 (272)
T ss_pred CCCcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhheEEcCCCCEEEC
Confidence 12458999999999999987422 234578999999999999999999998 99999999999999999999999
Q ss_pred eccCCccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHh-CCCccCCCCchhhhHHHHHHhhcC
Q 035862 226 DFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILT-GRRVLERNRPTMEQKLLEWVKQFP 304 (393)
Q Consensus 226 Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~ 304 (393)
|||++................+++.|+|||.+.+..++.++||||||+++|+|++ |..||....... .......
T Consensus 155 Dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~---~~~~~~~-- 229 (272)
T cd05075 155 DFGLSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSE---IYDYLRQ-- 229 (272)
T ss_pred CCCcccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHH---HHHHHHc--
Confidence 9999986543332222223346678999999999999999999999999999999 788987543321 1111111
Q ss_pred cCCcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q 035862 305 ADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLA 358 (393)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~ 358 (393)
+.. ...+..++..+.+++.+||+.||++|||+.++++.|+.+
T Consensus 230 --~~~----------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 230 --GNR----------LKQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred --CCC----------CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 000 001113456789999999999999999999999999865
No 131
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=1.4e-41 Score=309.23 Aligned_cols=262 Identities=27% Similarity=0.438 Sum_probs=207.2
Q ss_pred hcCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCc-ccHHHHHHHHHHhhcCCCCccceeeeeeecCCcc
Q 035862 71 TNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL-QGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDER 149 (393)
Q Consensus 71 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 149 (393)
.++|.+.+.||+|+||.||+|.+...........|++|.+..... .....+.+|+.+++.++||||+++++++....
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~-- 82 (277)
T cd05032 5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQ-- 82 (277)
T ss_pred hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCC--
Confidence 357999999999999999999987555445567899999865432 33456788999999999999999999988765
Q ss_pred cceEEEEEeecCCCChHHHHhhcC--------CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCc
Q 035862 150 GIQRLLVYEYMPNRSLEDRLFSRA--------QPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFK 221 (393)
Q Consensus 150 ~~~~~lv~e~~~~~~L~~~l~~~~--------~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~ 221 (393)
..++||||+++++|.+++.... ...+++..++.++.|++.||.|||+. +++||||||+||+++.++.
T Consensus 83 --~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~di~p~nill~~~~~ 157 (277)
T cd05032 83 --PTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAK---KFVHRDLAARNCMVAEDLT 157 (277)
T ss_pred --CcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccChheEEEcCCCC
Confidence 4599999999999999986432 23467889999999999999999998 9999999999999999999
Q ss_pred eEEeeccCCccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHh-CCCccCCCCchhhhHHHHHH
Q 035862 222 PKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILT-GRRVLERNRPTMEQKLLEWV 300 (393)
Q Consensus 222 ~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ellt-g~~pf~~~~~~~~~~~~~~~ 300 (393)
+||+|||+++...............++..|+|||.+.+..++.++|||||||++|||++ |..||.......... ..
T Consensus 158 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~---~~ 234 (277)
T cd05032 158 VKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLK---FV 234 (277)
T ss_pred EEECCcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHHHHHH---HH
Confidence 99999999876543332222233456788999999988889999999999999999998 999987554322111 11
Q ss_pred hhcCcCCcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 035862 301 KQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLK 356 (393)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~ 356 (393)
.. +. ....+..++..+.+++.+||+.+|++|||+.+++..|+
T Consensus 235 ~~----~~----------~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~ 276 (277)
T cd05032 235 ID----GG----------HLDLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLK 276 (277)
T ss_pred hc----CC----------CCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence 10 00 00111123578999999999999999999999998874
No 132
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=2.6e-41 Score=311.67 Aligned_cols=268 Identities=28% Similarity=0.434 Sum_probs=209.2
Q ss_pred hcCCcccceecccCCceEEEEEEcCCC--CCCCceEEEEEEecCCC-cccHHHHHHHHHHhhcC-CCCccceeeeeeecC
Q 035862 71 TNGFNRMLKIGEGGFGSVYKGTIRPLD--GRGEPLVVAVKKLNNHG-LQGHKQWLAEVQFLGVV-SHPNLVKLLGYCSTE 146 (393)
Q Consensus 71 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~--~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~ 146 (393)
.++|.+.+.||+|+||.||+|.+...+ .......+++|.+.... ......+.+|+.+++.+ +||||+++++++...
T Consensus 14 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~ 93 (304)
T cd05101 14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 93 (304)
T ss_pred HHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEecC
Confidence 356889999999999999999864322 22345679999887542 23346688999999999 799999999998876
Q ss_pred CcccceEEEEEeecCCCChHHHHhhcC--------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCC
Q 035862 147 DERGIQRLLVYEYMPNRSLEDRLFSRA--------------QPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTS 212 (393)
Q Consensus 147 ~~~~~~~~lv~e~~~~~~L~~~l~~~~--------------~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~ 212 (393)
. ..++||||+.+++|.+++.... ...+++..+..++.|++.||.|||++ |++||||||+
T Consensus 94 ~----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---givH~dlkp~ 166 (304)
T cd05101 94 G----PLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQ---KCIHRDLAAR 166 (304)
T ss_pred C----ceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHC---Ceeecccccc
Confidence 5 4599999999999999996532 23477888999999999999999998 9999999999
Q ss_pred CeEeCCCCceEEeeccCCccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHh-CCCccCCCCch
Q 035862 213 NVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILT-GRRVLERNRPT 291 (393)
Q Consensus 213 NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ellt-g~~pf~~~~~~ 291 (393)
||++++++.+||+|||++................++..|+|||++.+..++.++||||||+++|+|++ |..||......
T Consensus 167 Nili~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~ 246 (304)
T cd05101 167 NVLVTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE 246 (304)
T ss_pred eEEEcCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHH
Confidence 99999999999999999986544332222233456678999999988889999999999999999998 77888654322
Q ss_pred hhhHHHHHHhhcCcCCcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhh
Q 035862 292 MEQKLLEWVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQES 362 (393)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~~~~~ 362 (393)
. ........ . ....+..++..+.+|+.+||..+|.+||++.++++.|..+....
T Consensus 247 ~---~~~~~~~~----~----------~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~~~ 300 (304)
T cd05101 247 E---LFKLLKEG----H----------RMDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILTLT 300 (304)
T ss_pred H---HHHHHHcC----C----------cCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHHhh
Confidence 1 11111110 0 00111235678999999999999999999999999999887644
No 133
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=3.1e-41 Score=307.35 Aligned_cols=264 Identities=25% Similarity=0.396 Sum_probs=204.3
Q ss_pred cCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCc-ccHHHHHHHHHHhhcCCCCccceeeeeeecCCccc
Q 035862 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL-QGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERG 150 (393)
Q Consensus 72 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 150 (393)
++|++.+.||+|+||.||+|.+..++. .....+++|.+..... .....+..|+.+++.++||||+++++++...
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~-~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~~---- 81 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGD-SIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPGA---- 81 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCC-ceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEECCC----
Confidence 468889999999999999998754332 2233578888764322 2335567788889999999999999987533
Q ss_pred ceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCC
Q 035862 151 IQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLA 230 (393)
Q Consensus 151 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a 230 (393)
..++++||+.+|+|.+++.... ..+++..+..++.|++.||.|||+. +++||||||+||++++++.+||+|||++
T Consensus 82 -~~~~i~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~kl~Dfg~~ 156 (279)
T cd05111 82 -SLQLVTQLSPLGSLLDHVRQHR-DSLDPQRLLNWCVQIAKGMYYLEEH---RMVHRNLAARNILLKSDSIVQIADFGVA 156 (279)
T ss_pred -ccEEEEEeCCCCcHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEEcCCccc
Confidence 3478999999999999986433 4589999999999999999999998 9999999999999999999999999999
Q ss_pred ccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHh-CCCccCCCCchhhhHHHHHHhhcCcCCcc
Q 035862 231 REGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILT-GRRVLERNRPTMEQKLLEWVKQFPADGKK 309 (393)
Q Consensus 231 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 309 (393)
+...............++..|+|||.+.+..++.++|||||||++|||++ |..||............. . +..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~---~----~~~ 229 (279)
T cd05111 157 DLLYPDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVPDLLE---K----GER 229 (279)
T ss_pred eeccCCCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH---C----CCc
Confidence 76543332222334556778999999988899999999999999999998 999997654332222211 1 000
Q ss_pred cccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhh
Q 035862 310 FSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQES 362 (393)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~~~~~ 362 (393)
. ..+..++.++.+++.+||..||++|||+.++++.|..+.++.
T Consensus 230 ~----------~~~~~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~~~ 272 (279)
T cd05111 230 L----------AQPQICTIDVYMVMVKCWMIDENVRPTFKELANEFTRMARDP 272 (279)
T ss_pred C----------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHhCC
Confidence 0 001113456788999999999999999999999998877543
No 134
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=1.1e-41 Score=311.33 Aligned_cols=256 Identities=28% Similarity=0.445 Sum_probs=204.8
Q ss_pred CCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcc---cHHHHHHHHHHhhcCCCCccceeeeeeecCCcc
Q 035862 73 GFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQ---GHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDER 149 (393)
Q Consensus 73 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 149 (393)
.|+..+.||+|+||.||++.+..++ ..||+|.+...... ....+.+|+.+++.++|+||+.+++.+...+
T Consensus 1 ~f~~~~~ig~G~~g~v~~~~~~~~~-----~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~-- 73 (285)
T cd05630 1 TFRQYRVLGKGGFGEVCACQVRATG-----KMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKD-- 73 (285)
T ss_pred CceeeEEeecCCCeEEEEEEEcCCC-----ceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCC--
Confidence 3778889999999999999976444 46999988654222 2244678999999999999999999987766
Q ss_pred cceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccC
Q 035862 150 GIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGL 229 (393)
Q Consensus 150 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~ 229 (393)
..++||||+.+++|.+++.......+++..+..++.|++.||.|||+. +++||||||+||++++++.++|+|||+
T Consensus 74 --~~~lv~e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nil~~~~~~~~l~Dfg~ 148 (285)
T cd05630 74 --ALCLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQE---RIVYRDLKPENILLDDHGHIRISDLGL 148 (285)
T ss_pred --EEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeccc
Confidence 569999999999999998665556689999999999999999999998 999999999999999999999999999
Q ss_pred CccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhH-HHHHHhhcCcCCc
Q 035862 230 AREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQK-LLEWVKQFPADGK 308 (393)
Q Consensus 230 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~-~~~~~~~~~~~~~ 308 (393)
+........ .....|+..|+|||++.+..++.++||||+||++|+|++|..||.......... .......
T Consensus 149 ~~~~~~~~~---~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~~~------ 219 (285)
T cd05630 149 AVHVPEGQT---IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKE------ 219 (285)
T ss_pred eeecCCCcc---ccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhhhh------
Confidence 875432221 123478999999999999999999999999999999999999997643321111 1110000
Q ss_pred ccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCC-----HHHHHHHHHHH
Q 035862 309 KFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPT-----MNQVVESLKLA 358 (393)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps-----~~~~l~~l~~~ 358 (393)
.....+..++.++.+|+.+||+.||++||| +.++++|.|..
T Consensus 220 ---------~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h~~~~ 265 (285)
T cd05630 220 ---------VQEEYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEHPLFK 265 (285)
T ss_pred ---------hhhhcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcChhhh
Confidence 001112234577899999999999999999 99999998864
No 135
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=3.7e-42 Score=320.56 Aligned_cols=253 Identities=25% Similarity=0.385 Sum_probs=194.5
Q ss_pred ceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCC---cccHHHHHHHHHHhhcC-CCCccceeeeeeecCCcccceE
Q 035862 78 LKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG---LQGHKQWLAEVQFLGVV-SHPNLVKLLGYCSTEDERGIQR 153 (393)
Q Consensus 78 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~ 153 (393)
+.||+|+||.||+|.+..++ ..||+|.+.+.. ......+.+|+.++..+ +||||+++++++...+ ..
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~-----~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~----~~ 71 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTE-----RIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTES----RL 71 (329)
T ss_pred CeeeeCCCeEEEEEEECCCC-----CEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCC----EE
Confidence 36999999999999975443 469999987542 22334567788888776 7999999999988776 56
Q ss_pred EEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCCccC
Q 035862 154 LLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREG 233 (393)
Q Consensus 154 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~ 233 (393)
++||||+++++|..++. ....+++..++.++.|++.||.|||++ +|+||||||+||+++.++.+||+|||++...
T Consensus 72 ~lv~E~~~~~~L~~~~~--~~~~l~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~ 146 (329)
T cd05618 72 FFVIEYVNGGDLMFHMQ--RQRKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEG 146 (329)
T ss_pred EEEEeCCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCCEEEeeCCccccc
Confidence 99999999999998874 345689999999999999999999998 9999999999999999999999999998753
Q ss_pred CCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCch--hhhHHHHHHhhcCcCCcccc
Q 035862 234 PTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPT--MEQKLLEWVKQFPADGKKFS 311 (393)
Q Consensus 234 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~--~~~~~~~~~~~~~~~~~~~~ 311 (393)
..... ......||+.|+|||++.+..++.++|||||||++|+|++|..||...... .......+....
T Consensus 147 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~-------- 216 (329)
T cd05618 147 LRPGD--TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQV-------- 216 (329)
T ss_pred cCCCC--ccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHH--------
Confidence 22211 223457899999999999999999999999999999999999999532111 000000000000
Q ss_pred cccCcccccccCHHHHHHHHHHHHHhcccCCCCCCC------HHHHHHHHHH
Q 035862 312 MMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPT------MNQVVESLKL 357 (393)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps------~~~~l~~l~~ 357 (393)
.... ....+...+..+.+++.+||+.||++||+ +.++++|.+.
T Consensus 217 -i~~~--~~~~p~~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~hp~f 265 (329)
T cd05618 217 -ILEK--QIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFF 265 (329)
T ss_pred -HhcC--CCCCCCCCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcCCCC
Confidence 0000 01122234677899999999999999998 5799998653
No 136
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=9.7e-42 Score=325.12 Aligned_cols=272 Identities=23% Similarity=0.275 Sum_probs=205.6
Q ss_pred hcCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcccHHHHHHHHHHhhcCCCCccceeeeeeecCCccc
Q 035862 71 TNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERG 150 (393)
Q Consensus 71 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 150 (393)
..+|.+++.||+|+||.||++.... ......|++|.+... ....+|+.+++.++||||+++++++....
T Consensus 91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~---~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~~~~~--- 159 (392)
T PHA03207 91 RMQYNILSSLTPGSEGEVFVCTKHG---DEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAYRWKS--- 159 (392)
T ss_pred cCceEEEEeecCCCCeEEEEEEEcC---CccceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeEeeCC---
Confidence 4579999999999999999997542 234567899987653 23457999999999999999999987765
Q ss_pred ceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCC
Q 035862 151 IQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLA 230 (393)
Q Consensus 151 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a 230 (393)
..++|||++. ++|.+++ .....+++..++.++.||+.||.|||+. ||+||||||+|||++.++.++|+|||++
T Consensus 160 -~~~lv~e~~~-~~l~~~l--~~~~~l~~~~~~~i~~ql~~aL~~LH~~---givHrDlkp~Nill~~~~~~~l~DfG~a 232 (392)
T PHA03207 160 -TVCMVMPKYK-CDLFTYV--DRSGPLPLEQAITIQRRLLEALAYLHGR---GIIHRDVKTENIFLDEPENAVLGDFGAA 232 (392)
T ss_pred -EEEEEehhcC-CCHHHHH--HhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEccCccc
Confidence 5699999995 6898888 3445689999999999999999999998 9999999999999999999999999999
Q ss_pred ccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchh-hhHHHHHHhhcCcCCcc
Q 035862 231 REGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTM-EQKLLEWVKQFPADGKK 309 (393)
Q Consensus 231 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~-~~~~~~~~~~~~~~~~~ 309 (393)
................||+.|+|||++.+..++.++|||||||++|||++|+.||....... ...+.............
T Consensus 233 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~ 312 (392)
T PHA03207 233 CKLDAHPDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLE 312 (392)
T ss_pred cccCcccccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccc
Confidence 76544333323345679999999999999999999999999999999999999996543321 11111111111000000
Q ss_pred cccc-----------cCccccccc-------CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHh
Q 035862 310 FSMM-----------IDPRLRNQY-------SINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQ 360 (393)
Q Consensus 310 ~~~~-----------~~~~~~~~~-------~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~~~ 360 (393)
+... .....+..+ ....+.++.+||.+||..||++|||+.+++.|.+....
T Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~p~f~~~ 381 (392)
T PHA03207 313 FPQNGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSLPLFTKE 381 (392)
T ss_pred cCCccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhCchhhcc
Confidence 0000 000000000 01235678899999999999999999999999987543
No 137
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1e-41 Score=327.90 Aligned_cols=267 Identities=22% Similarity=0.259 Sum_probs=198.5
Q ss_pred hcCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcccHHHHHHHHHHhhcCCCCccceeeeeeecCCccc
Q 035862 71 TNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERG 150 (393)
Q Consensus 71 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 150 (393)
..+|.+.+.||+|+||.||+|.+.... ..|++|.... ..+.+|+.+|+.++|+||+++++++...+
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~-----~~vavK~~~~------~~~~~E~~iL~~L~HpnIv~l~~~~~~~~--- 233 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPDYP-----QRVVVKAGWY------ASSVHEARLLRRLSHPAVLALLDVRVVGG--- 233 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECCCC-----CEEEEecccc------cCHHHHHHHHHHCCCCCCCcEEEEEEECC---
Confidence 457999999999999999999976443 4589986432 23568999999999999999999987766
Q ss_pred ceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCC
Q 035862 151 IQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLA 230 (393)
Q Consensus 151 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a 230 (393)
..++|||++. ++|.+++.... ..+++..++.++.|++.||.|||++ ||+||||||+|||++.++.+||+|||++
T Consensus 234 -~~~lv~e~~~-~~L~~~l~~~~-~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDLKP~NILl~~~~~vkL~DFGla 307 (461)
T PHA03211 234 -LTCLVLPKYR-SDLYTYLGARL-RPLGLAQVTAVARQLLSAIDYIHGE---GIIHRDIKTENVLVNGPEDICLGDFGAA 307 (461)
T ss_pred -EEEEEEEccC-CCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC---CEEECcCCHHHEEECCCCCEEEcccCCc
Confidence 5599999994 68988885432 3689999999999999999999998 9999999999999999999999999999
Q ss_pred ccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCch-----hhhHHHHHHhhcCc
Q 035862 231 REGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPT-----MEQKLLEWVKQFPA 305 (393)
Q Consensus 231 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~-----~~~~~~~~~~~~~~ 305 (393)
+...............||..|+|||++.+..++.++|||||||++|||++|..++...... ....+.........
T Consensus 308 ~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~ 387 (461)
T PHA03211 308 CFARGSWSTPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQV 387 (461)
T ss_pred eecccccccccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhcc
Confidence 7653322222223457999999999999999999999999999999999988665332111 11122222211111
Q ss_pred CCcccccccC------------ccccc-----ccC--HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 035862 306 DGKKFSMMID------------PRLRN-----QYS--INAARRVAKLADNCLKKNPEERPTMNQVVESLKL 357 (393)
Q Consensus 306 ~~~~~~~~~~------------~~~~~-----~~~--~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~ 357 (393)
....+..... ..... .+. ...+.++.+||.+||+.||.+|||+.|+++|.|.
T Consensus 388 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~hp~f 458 (461)
T PHA03211 388 HVDEFPQHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRLPLF 458 (461)
T ss_pred ccccCCCCcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhCccc
Confidence 0000000000 00000 000 1234578999999999999999999999999775
No 138
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=2.1e-41 Score=305.56 Aligned_cols=255 Identities=23% Similarity=0.324 Sum_probs=202.3
Q ss_pred cCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCc-----ccHHHHHHHHHHhhcCCCCccceeeeeeecC
Q 035862 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL-----QGHKQWLAEVQFLGVVSHPNLVKLLGYCSTE 146 (393)
Q Consensus 72 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 146 (393)
++|.+.+.||+|++|.||.|....++ ..+++|.+..... .....+.+|+.+++.++||||+++++++...
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~-----~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 76 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTG-----RELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDD 76 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCC-----cEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccC
Confidence 46889999999999999999865333 4599998764321 1234577899999999999999999999877
Q ss_pred CcccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEee
Q 035862 147 DERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSD 226 (393)
Q Consensus 147 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~D 226 (393)
+ ..++||||+.+++|.+++.. ...+++..+..++.|++.||.|||+. +++|+||+|+||++++++.++|+|
T Consensus 77 ~----~~~~v~e~~~~~~l~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nilv~~~~~~~l~d 147 (263)
T cd06625 77 E----TLSIFMEYMPGGSVKDQLKA--YGALTETVTRKYTRQILEGVEYLHSN---MIVHRDIKGANILRDSAGNVKLGD 147 (263)
T ss_pred C----eEEEEEEECCCCcHHHHHHH--hCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEee
Confidence 6 56999999999999998854 34588899999999999999999998 999999999999999999999999
Q ss_pred ccCCccCCCCCCcc-ccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCc
Q 035862 227 FGLAREGPTGDHTH-VSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPA 305 (393)
Q Consensus 227 fg~a~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~ 305 (393)
||++.......... ......++..|+|||.+.+..++.++||||||+++|+|++|+.||......... .... .
T Consensus 148 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~--~~~~-~--- 221 (263)
T cd06625 148 FGASKRLQTICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAI--FKIA-T--- 221 (263)
T ss_pred cccceeccccccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHHHH--HHHh-c---
Confidence 99987543321111 112346788999999999988999999999999999999999999754332111 1100 0
Q ss_pred CCcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 035862 306 DGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLK 356 (393)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~ 356 (393)
.......+..++..+.+++.+||..+|.+||++.+++++.|
T Consensus 222 ----------~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~ 262 (263)
T cd06625 222 ----------QPTNPQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRHFF 262 (263)
T ss_pred ----------cCCCCCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhCCC
Confidence 00111222345678899999999999999999999999865
No 139
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3e-43 Score=327.09 Aligned_cols=255 Identities=24% Similarity=0.392 Sum_probs=209.1
Q ss_pred CCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcccHHHHHHHHHHhhcCCCCccceeeeeeecCCcccce
Q 035862 73 GFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQ 152 (393)
Q Consensus 73 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 152 (393)
-|.++..||.|+||.||+|..+. .+...|-|++...+......++-|++||..+.||+||++++.|..++ .
T Consensus 33 ~WeIiGELGDGAFGKVyKA~nke-----t~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~en----k 103 (1187)
T KOG0579|consen 33 HWEIIGELGDGAFGKVYKAVNKE-----TKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFEN----K 103 (1187)
T ss_pred HHHHHhhhcCccchhhhhhhccc-----chhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccC----c
Confidence 46778899999999999998543 44457888888877778888999999999999999999999888777 5
Q ss_pred EEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCCcc
Q 035862 153 RLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLARE 232 (393)
Q Consensus 153 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~ 232 (393)
++++.|||.||-.+..+..- ...+.+.++.-+++|++.||.|||++ +|||||||.+|||++-+|.++|+|||.+..
T Consensus 104 LwiliEFC~GGAVDaimlEL-~r~LtE~QIqvvc~q~ldALn~LHs~---~iIHRDLKAGNiL~TldGdirLADFGVSAK 179 (1187)
T KOG0579|consen 104 LWILIEFCGGGAVDAIMLEL-GRVLTEDQIQVVCYQVLDALNWLHSQ---NIIHRDLKAGNILLTLDGDIRLADFGVSAK 179 (1187)
T ss_pred eEEEEeecCCchHhHHHHHh-ccccchHHHHHHHHHHHHHHHHHhhc---chhhhhccccceEEEecCcEeeeccccccc
Confidence 69999999999998877543 45689999999999999999999999 999999999999999999999999999865
Q ss_pred CCCCCCccccccccccCCccCccccc-----cCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcCC
Q 035862 233 GPTGDHTHVSTAVVGTYGYAAPEYIE-----TGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADG 307 (393)
Q Consensus 233 ~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 307 (393)
... .......+.|||+|||||+.. ..+|+.++||||||++|.||..+.+|-..-++-.. ++.....-
T Consensus 180 n~~--t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRV--llKiaKSe---- 251 (1187)
T KOG0579|consen 180 NKS--TRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRV--LLKIAKSE---- 251 (1187)
T ss_pred chh--HHhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHH--HHHHhhcC----
Confidence 332 233456789999999999874 56899999999999999999999998765443211 11111111
Q ss_pred cccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 035862 308 KKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKL 357 (393)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~ 357 (393)
......+...+..+.+|+.+||.+||..||++.++++|.|.
T Consensus 252 ---------PPTLlqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~Hpfv 292 (1187)
T KOG0579|consen 252 ---------PPTLLQPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKHPFV 292 (1187)
T ss_pred ---------CCcccCcchhhhHHHHHHHHHHhcCCccCCCHHHHhhCccc
Confidence 11111234567889999999999999999999999999764
No 140
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=4.3e-41 Score=303.58 Aligned_cols=255 Identities=29% Similarity=0.405 Sum_probs=202.7
Q ss_pred cCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcccHHHHHHHHHHhhcCCCCccceeeeeeecCCcccc
Q 035862 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGI 151 (393)
Q Consensus 72 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 151 (393)
++|++.++||+|+||.||+|.+... ..|++|.+.... .....+.+|+.+++.++||||+++++++...
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~~~------~~valK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~----- 73 (262)
T cd05071 6 ESLRLEVKLGQGCFGEVWMGTWNGT------TRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE----- 73 (262)
T ss_pred HHeeEeeecCCCCCCcEEEEEecCC------ceEEEEecccCc-cCHHHHHHHHHHHHhCCCCCcceEEEEECCC-----
Confidence 5699999999999999999986432 248999987543 2345688999999999999999999887432
Q ss_pred eEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCCc
Q 035862 152 QRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAR 231 (393)
Q Consensus 152 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~ 231 (393)
..++||||+.+++|.+++.......+++..+..++.|++.||+|||+. +++|+||||+||++++++.++|+|||.+.
T Consensus 74 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~Nill~~~~~~~L~dfg~~~ 150 (262)
T cd05071 74 PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLAR 150 (262)
T ss_pred CcEEEEEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcccEEEcCCCcEEeccCCcee
Confidence 348999999999999999765555688999999999999999999998 99999999999999999999999999997
Q ss_pred cCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHh-CCCccCCCCchhhhHHHHHHhhcCcCCccc
Q 035862 232 EGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILT-GRRVLERNRPTMEQKLLEWVKQFPADGKKF 310 (393)
Q Consensus 232 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (393)
........ ......++..|+|||+..+..++.++||||||+++|+|++ |..||............ ...
T Consensus 151 ~~~~~~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~~~~--~~~-------- 219 (262)
T cd05071 151 LIEDNEYT-ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV--ERG-------- 219 (262)
T ss_pred eccccccc-cccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHHHHH--hcC--------
Confidence 65433221 1123346678999999988899999999999999999999 88888755432111110 000
Q ss_pred ccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHH
Q 035862 311 SMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAV 359 (393)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~~ 359 (393)
.....+..++..+.+++.+||+.||++||++.++++.|+..+
T Consensus 220 -------~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~~ 261 (262)
T cd05071 220 -------YRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF 261 (262)
T ss_pred -------CCCCCccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHhc
Confidence 001112245678899999999999999999999999988653
No 141
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=2.2e-41 Score=312.76 Aligned_cols=268 Identities=26% Similarity=0.388 Sum_probs=205.3
Q ss_pred cCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCC-cccHHHHHHHHHHhhcCCCCccceeeeeeecCCccc
Q 035862 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG-LQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERG 150 (393)
Q Consensus 72 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 150 (393)
++|++.+.||+|+||.||++.+..+ +..+++|.+.... ......+.+|+++++.++||||+++++.+...+
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~-----~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--- 72 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPS-----GLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDG--- 72 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCC-----CeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCC---
Confidence 4699999999999999999986533 3468888886542 223456788999999999999999999998776
Q ss_pred ceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhc-CCCCCeEeccCCCCCeEeCCCCceEEeeccC
Q 035862 151 IQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHE-GLEIQVIYRDFKTSNVLLDGNFKPKLSDFGL 229 (393)
Q Consensus 151 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~-~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~ 229 (393)
..++||||+++++|.+++.. ...+++..+..++.|++.||.|||+ . +++|+||||+|||++.++.+||+|||+
T Consensus 73 -~~~lv~ey~~~~~L~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~---~i~H~dl~p~nil~~~~~~~~l~dfg~ 146 (308)
T cd06615 73 -EISICMEHMDGGSLDQVLKK--AGRIPENILGKISIAVLRGLTYLREKH---KIMHRDVKPSNILVNSRGEIKLCDFGV 146 (308)
T ss_pred -EEEEEeeccCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhhC---CEEECCCChHHEEEecCCcEEEccCCC
Confidence 56999999999999999854 3568999999999999999999997 5 899999999999999999999999999
Q ss_pred CccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcCCcc
Q 035862 230 AREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKK 309 (393)
Q Consensus 230 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 309 (393)
+...... ......|+..|+|||++.+..++.++|+|||||++|+|++|..||............ .........
T Consensus 147 ~~~~~~~----~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~---~~~~~~~~~ 219 (308)
T cd06615 147 SGQLIDS----MANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMF---GRPVSEGEA 219 (308)
T ss_pred ccccccc----ccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhh---cCccccccc
Confidence 8754322 123457889999999998888999999999999999999999999654322111111 100000000
Q ss_pred c-----------------------ccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHh
Q 035862 310 F-----------------------SMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQ 360 (393)
Q Consensus 310 ~-----------------------~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~~~ 360 (393)
. ...............++.++.+|+.+||..+|++||++.+++++.|....
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~ 293 (308)
T cd06615 220 KESHRPVSGHPPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHPFIKRA 293 (308)
T ss_pred cCCcccccCCCCCccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhhc
Confidence 0 00000000000011256779999999999999999999999999998653
No 142
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=3.9e-41 Score=308.09 Aligned_cols=266 Identities=28% Similarity=0.458 Sum_probs=205.7
Q ss_pred HhcCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCc-ccHHHHHHHHHHhhcCCCCccceeeeeeecCCc
Q 035862 70 ATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL-QGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDE 148 (393)
Q Consensus 70 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 148 (393)
..++|++.+.||+|+||.||+|..+..........||+|.+..... .....+.+|+.+++.++||||+++++++...+
T Consensus 4 ~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~- 82 (288)
T cd05061 4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQ- 82 (288)
T ss_pred cHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC-
Confidence 3567999999999999999999876433334456799998865432 22345778999999999999999999987766
Q ss_pred ccceEEEEEeecCCCChHHHHhhcC--------CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCC
Q 035862 149 RGIQRLLVYEYMPNRSLEDRLFSRA--------QPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNF 220 (393)
Q Consensus 149 ~~~~~~lv~e~~~~~~L~~~l~~~~--------~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~ 220 (393)
..++||||+.+|+|.+++.... ........+..++.|++.||.|||++ +++||||||+||++++++
T Consensus 83 ---~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dikp~nili~~~~ 156 (288)
T cd05061 83 ---PTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDF 156 (288)
T ss_pred ---CcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCCChheEEEcCCC
Confidence 4599999999999999996422 13346677889999999999999998 999999999999999999
Q ss_pred ceEEeeccCCccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHh-CCCccCCCCchhhhHHHHH
Q 035862 221 KPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILT-GRRVLERNRPTMEQKLLEW 299 (393)
Q Consensus 221 ~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ellt-g~~pf~~~~~~~~~~~~~~ 299 (393)
.++|+|||+++...............++..|+|||.+.+..++.++|||||||++|||++ |..||....... ....
T Consensus 157 ~~~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~---~~~~ 233 (288)
T cd05061 157 TVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQ---VLKF 233 (288)
T ss_pred cEEECcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHH---HHHH
Confidence 999999999875433322222223345678999999998899999999999999999998 788886543321 1111
Q ss_pred HhhcCcCCcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHH
Q 035862 300 VKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAV 359 (393)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~~ 359 (393)
... +... ..+..++..+.+++.+||+.||++|||+.++++.+....
T Consensus 234 ~~~----~~~~----------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~ 279 (288)
T cd05061 234 VMD----GGYL----------DQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL 279 (288)
T ss_pred HHc----CCCC----------CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhc
Confidence 110 0000 011123578999999999999999999999999988764
No 143
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=3.1e-41 Score=303.39 Aligned_cols=251 Identities=28% Similarity=0.470 Sum_probs=198.2
Q ss_pred cCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcccHHHHHHHHHHhhcCCCCccceeeeeeecCCcccc
Q 035862 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGI 151 (393)
Q Consensus 72 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 151 (393)
++|++.+.||+|+||.||+|.+... ..+++|.+.... .....+.+|+.+++.++||||+++++++...+
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~------~~~a~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~---- 72 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWRAQ------IKVAIKAINEGA-MSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQK---- 72 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEeccC------ceEEEEecccCC-ccHHHHHHHHHHHHHCCCCCceeEEEEEccCC----
Confidence 4588899999999999999986432 258999876543 33467888999999999999999999987766
Q ss_pred eEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCCc
Q 035862 152 QRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAR 231 (393)
Q Consensus 152 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~ 231 (393)
..++||||+++++|.+++.... ..+++..++.++.|++.||.|||++ +++||||||+||++++++.+||+|||.+.
T Consensus 73 ~~~iv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~d~g~~~ 148 (256)
T cd05114 73 PLYIVTEFMENGCLLNYLRQRQ-GKLSKDMLLSMCQDVCEGMEYLERN---SFIHRDLAARNCLVSSTGVVKVSDFGMTR 148 (256)
T ss_pred CEEEEEEcCCCCcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcceEEEcCCCeEEECCCCCcc
Confidence 4599999999999999885433 3588999999999999999999998 99999999999999999999999999987
Q ss_pred cCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHh-CCCccCCCCchhhhHHHHHHhhcCcCCccc
Q 035862 232 EGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILT-GRRVLERNRPTMEQKLLEWVKQFPADGKKF 310 (393)
Q Consensus 232 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (393)
........ ......++..|+|||.+.+..++.++||||||+++|+|++ |+.||........ ....... ..
T Consensus 149 ~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~---~~~i~~~----~~- 219 (256)
T cd05114 149 YVLDDEYT-SSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEV---VEMISRG----FR- 219 (256)
T ss_pred ccCCCcee-ccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHH---HHHHHCC----CC-
Confidence 64332211 1122345568999999988899999999999999999999 8999975543211 1111110 00
Q ss_pred ccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 035862 311 SMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESL 355 (393)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l 355 (393)
. ..+...+..+.+++.+||+.+|++||++.++++.|
T Consensus 220 --~-------~~~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l 255 (256)
T cd05114 220 --L-------YRPKLASMTVYEVMYSCWHEKPEGRPTFAELLRAI 255 (256)
T ss_pred --C-------CCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence 0 01112346789999999999999999999999875
No 144
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=2.2e-41 Score=319.98 Aligned_cols=273 Identities=24% Similarity=0.314 Sum_probs=203.0
Q ss_pred HhcCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCC--cccHHHHHHHHHHhhcCCCCccceeeeeeecCC
Q 035862 70 ATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG--LQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTED 147 (393)
Q Consensus 70 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 147 (393)
..++|++.+.||+|+||.||+|.+...+ ..||+|++.... ......+.+|+.+++.++||||+++++++...+
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~ 96 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILE-----RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQK 96 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCC-----cEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccc
Confidence 3568999999999999999999865443 359999987532 233456778999999999999999999876543
Q ss_pred c--ccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEe
Q 035862 148 E--RGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLS 225 (393)
Q Consensus 148 ~--~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~ 225 (393)
. .....|+||||+.+ +|.+++. ..+++..+..++.|++.||.|||++ ||+||||||+|||++.++.+||+
T Consensus 97 ~~~~~~~~~lv~e~~~~-~l~~~~~----~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~ 168 (364)
T cd07875 97 SLEEFQDVYIVMELMDA-NLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKIL 168 (364)
T ss_pred cccccCeEEEEEeCCCC-CHHHHHH----hcCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEECCCCcEEEE
Confidence 2 12256999999965 7877763 2478889999999999999999998 99999999999999999999999
Q ss_pred eccCCccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHH-HH------
Q 035862 226 DFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKL-LE------ 298 (393)
Q Consensus 226 Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~-~~------ 298 (393)
|||++....... ......|+..|+|||++.+..++.++|||||||++|+|++|+.||...+....... ..
T Consensus 169 DfG~a~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~ 245 (364)
T cd07875 169 DFGLARTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPC 245 (364)
T ss_pred eCCCccccCCCC---cccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCC
Confidence 999997643321 22345789999999999999999999999999999999999999976543221110 00
Q ss_pred -------------HHhhcCcC-CcccccccCccc---ccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q 035862 299 -------------WVKQFPAD-GKKFSMMIDPRL---RNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLA 358 (393)
Q Consensus 299 -------------~~~~~~~~-~~~~~~~~~~~~---~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~ 358 (393)
.....+.. +..+........ ........+.++.+||.+||+.||.+|||+.++++|.|..
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~hp~~~ 322 (364)
T cd07875 246 PEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN 322 (364)
T ss_pred HHHHHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcCcccc
Confidence 00000000 000000000000 0001112346789999999999999999999999998864
No 145
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=2.5e-41 Score=313.67 Aligned_cols=269 Identities=22% Similarity=0.349 Sum_probs=192.0
Q ss_pred cceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcccHHHHHHHHHHhhcCCCCccceeeeeeecCCcccceEEEE
Q 035862 77 MLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLV 156 (393)
Q Consensus 77 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv 156 (393)
..+||+|+||.||+|.... ......+|+|.+.... ....+.+|+.+++.++||||+++++++...... ..+++
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~---~~~~~~~aiK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~--~~~lv 78 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKD---GKDDRDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADR--KVWLL 78 (317)
T ss_pred ccccccCCCeEEEEEEEcc---CCCCceEEEEEECCCC--CcHHHHHHHHHHHhcCCCCCcceeeeEecCCCc--EEEEE
Confidence 3579999999999998642 1234579999987543 234567899999999999999999988765443 56899
Q ss_pred EeecCCCChHHHHhhc-------CCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEe----CCCCceEEe
Q 035862 157 YEYMPNRSLEDRLFSR-------AQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLL----DGNFKPKLS 225 (393)
Q Consensus 157 ~e~~~~~~L~~~l~~~-------~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll----~~~~~~kl~ 225 (393)
|||+. ++|.+++... ....+++..++.++.||+.||.|||++ ||+||||||+|||+ +.++.+||+
T Consensus 79 ~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivHrDlkp~Nil~~~~~~~~~~~kl~ 154 (317)
T cd07868 79 FDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIA 154 (317)
T ss_pred EeccC-CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEecCCCCcCcEEEe
Confidence 99995 5888877422 123588999999999999999999998 99999999999999 456789999
Q ss_pred eccCCccCCCCCCc-cccccccccCCccCcccccc-CCCCchhhHHHHHHHHHHHHhCCCccCCCCchhh-------hHH
Q 035862 226 DFGLAREGPTGDHT-HVSTAVVGTYGYAAPEYIET-GHLKSQSDIWSFGVVLYEILTGRRVLERNRPTME-------QKL 296 (393)
Q Consensus 226 Dfg~a~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~-------~~~ 296 (393)
|||++......... .......||+.|+|||++.+ ..++.++||||+||++|+|++|.+||........ ..+
T Consensus 155 DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~ 234 (317)
T cd07868 155 DMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQL 234 (317)
T ss_pred ecCceeccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCcccccccccccHHHH
Confidence 99999765332211 12234678999999999876 4689999999999999999999999965432210 001
Q ss_pred HHHHhh--------------cCcCCcccccccCccc--------ccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 035862 297 LEWVKQ--------------FPADGKKFSMMIDPRL--------RNQYSINAARRVAKLADNCLKKNPEERPTMNQVVES 354 (393)
Q Consensus 297 ~~~~~~--------------~~~~~~~~~~~~~~~~--------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~ 354 (393)
...... .+.............. ........+..+.+|+.+||++||.+|||++++++|
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~h 314 (317)
T cd07868 235 DRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQD 314 (317)
T ss_pred HHHHHhcCCCChHHhHHHhhccchhhhhhhhhccccCcccccchHHhcCCCCChHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 110000 0000000000000000 000000123568899999999999999999999998
Q ss_pred HH
Q 035862 355 LK 356 (393)
Q Consensus 355 l~ 356 (393)
.|
T Consensus 315 p~ 316 (317)
T cd07868 315 PY 316 (317)
T ss_pred CC
Confidence 65
No 146
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=2.2e-41 Score=308.03 Aligned_cols=249 Identities=27% Similarity=0.385 Sum_probs=193.9
Q ss_pred ecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCc---ccHHHHHHHHHHhhcCCCCccceeeeeeecCCcccceEEEE
Q 035862 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL---QGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLV 156 (393)
Q Consensus 80 lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv 156 (393)
||+|+||.||++....+ +..||+|.+..... .....+..|+++++.++||||+++++++.... +.++|
T Consensus 1 lg~G~~g~Vy~~~~~~~-----~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~----~~~lv 71 (277)
T cd05607 1 LGKGGFGEVCAVQVKNT-----GKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKT----HLCLV 71 (277)
T ss_pred CCCCCceEEEEEEEccC-----CcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCC----eEEEE
Confidence 79999999999986543 44699999864321 12334567999999999999999999987665 56999
Q ss_pred EeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCCccCCCC
Q 035862 157 YEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTG 236 (393)
Q Consensus 157 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~ 236 (393)
|||+++++|.+++.......+++..+..++.|++.||+|||+. +++||||||+||++++++.++|+|||++......
T Consensus 72 ~e~~~g~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~ 148 (277)
T cd05607 72 MSLMNGGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSM---DIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDG 148 (277)
T ss_pred EecCCCCCHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHC---CEEEccCChHhEEEcCCCCEEEeeceeeeecCCC
Confidence 9999999999988665556688999999999999999999998 9999999999999999999999999998765332
Q ss_pred CCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhh-hHHHHHHhhcCcCCcccccccC
Q 035862 237 DHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTME-QKLLEWVKQFPADGKKFSMMID 315 (393)
Q Consensus 237 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 315 (393)
. ......|+..|+|||++.+..++.++|||||||++|+|++|..||........ ........ .
T Consensus 149 ~---~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~---~---------- 212 (277)
T cd05607 149 K---TITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTL---E---------- 212 (277)
T ss_pred c---eeeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhh---c----------
Confidence 2 12345689999999999988899999999999999999999999975433211 11111000 0
Q ss_pred cccccccCHHHHHHHHHHHHHhcccCCCCCCCHH----HHHHHHHH
Q 035862 316 PRLRNQYSINAARRVAKLADNCLKKNPEERPTMN----QVVESLKL 357 (393)
Q Consensus 316 ~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~----~~l~~l~~ 357 (393)
.... .....++.++.+|+.+||++||++||++. +++.|.|.
T Consensus 213 ~~~~-~~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~~~h~~f 257 (277)
T cd05607 213 DEVK-FEHQNFTEESKDICRLFLAKKPEDRLGSREKNDDPRKHEFF 257 (277)
T ss_pred cccc-cccccCCHHHHHHHHHHhccCHhhCCCCccchhhhhcChhh
Confidence 0000 00113467899999999999999999994 45566544
No 147
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=5.2e-41 Score=303.77 Aligned_cols=259 Identities=24% Similarity=0.375 Sum_probs=205.4
Q ss_pred cCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCC---cccHHHHHHHHHHhhcCCCCccceeeeeeecCCc
Q 035862 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG---LQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDE 148 (393)
Q Consensus 72 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 148 (393)
++|++.+.||+|+||.||+|+...++ ..|++|.+.... ......+.+|+.+++.++||||+++++++...+
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~-----~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~- 75 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDR-----KPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDN- 75 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCC-----CEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECC-
Confidence 57999999999999999999975443 359999875422 223345788999999999999999999988765
Q ss_pred ccceEEEEEeecCCCChHHHHhh--cCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEee
Q 035862 149 RGIQRLLVYEYMPNRSLEDRLFS--RAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSD 226 (393)
Q Consensus 149 ~~~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~D 226 (393)
..+++|||+.+++|.+++.. .....+++..++.++.|++.||.|||++ +++|+||||+||+++.++.++|+|
T Consensus 76 ---~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~nil~~~~~~~~l~d 149 (267)
T cd08228 76 ---ELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSR---RVMHRDIKPANVFITATGVVKLGD 149 (267)
T ss_pred ---eEEEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCCHHHEEEcCCCCEEECc
Confidence 55999999999999988853 2334578899999999999999999998 999999999999999999999999
Q ss_pred ccCCccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcC
Q 035862 227 FGLAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPAD 306 (393)
Q Consensus 227 fg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~ 306 (393)
||++........ ......|++.|+|||.+.+..++.++|+||||+++|+|++|+.||......... .........
T Consensus 150 ~g~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~-~~~~~~~~~-- 224 (267)
T cd08228 150 LGLGRFFSSKTT--AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFS-LCQKIEQCD-- 224 (267)
T ss_pred cccceeccchhH--HHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHHH-HHHHHhcCC--
Confidence 999876533221 123456888999999998888999999999999999999999999654332211 111111100
Q ss_pred CcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q 035862 307 GKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLA 358 (393)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~ 358 (393)
.........+..+.+++.+||..+|++||++.++++.+..+
T Consensus 225 -----------~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~ 265 (267)
T cd08228 225 -----------YPPLPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQM 265 (267)
T ss_pred -----------CCCCChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHh
Confidence 01111224567899999999999999999999999999875
No 148
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=2.5e-41 Score=311.61 Aligned_cols=263 Identities=30% Similarity=0.462 Sum_probs=204.1
Q ss_pred hcCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCC-cccHHHHHHHHHHhhcC-CCCccceeeeeeecCCc
Q 035862 71 TNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG-LQGHKQWLAEVQFLGVV-SHPNLVKLLGYCSTEDE 148 (393)
Q Consensus 71 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~ 148 (393)
.++|++.+.||+|+||.||+|.+..+ +....+++|.+.... ......+.+|+.++..+ +||||+++++++...+
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~a~~~~~---~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~- 81 (303)
T cd05088 6 WNDIKFQDVIGEGNFGQVLKARIKKD---GLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRG- 81 (303)
T ss_pred hhhceeeeeecCCCCceEEEEEEccC---CceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCC-
Confidence 35789999999999999999987532 233457888766432 23345677899999999 7999999999987766
Q ss_pred ccceEEEEEeecCCCChHHHHhhcC--------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCe
Q 035862 149 RGIQRLLVYEYMPNRSLEDRLFSRA--------------QPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNV 214 (393)
Q Consensus 149 ~~~~~~lv~e~~~~~~L~~~l~~~~--------------~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NI 214 (393)
..++||||+++++|.+++.... ...+++..++.++.|++.||+|||+. |++||||||+||
T Consensus 82 ---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dlkp~Ni 155 (303)
T cd05088 82 ---YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNI 155 (303)
T ss_pred ---CceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheE
Confidence 4599999999999999986432 23578999999999999999999998 999999999999
Q ss_pred EeCCCCceEEeeccCCccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHh-CCCccCCCCchhh
Q 035862 215 LLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILT-GRRVLERNRPTME 293 (393)
Q Consensus 215 ll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ellt-g~~pf~~~~~~~~ 293 (393)
|++.++.+||+|||++....... ......++..|+|||.+.+..++.++|||||||++|+|+| |..||.......
T Consensus 156 li~~~~~~kl~dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~- 231 (303)
T cd05088 156 LVGENYVAKIADFGLSRGQEVYV---KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE- 231 (303)
T ss_pred EecCCCcEEeCccccCcccchhh---hcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChHH-
Confidence 99999999999999986321111 1112234567999999988889999999999999999998 999996543321
Q ss_pred hHHHHHHhhcCcCCcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhhc
Q 035862 294 QKLLEWVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQESE 363 (393)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~~~~~~ 363 (393)
...... .. .....+...+..+.+|+.+||+.+|++||++.+++..+..+++...
T Consensus 232 --~~~~~~---~~-----------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~~~~ 285 (303)
T cd05088 232 --LYEKLP---QG-----------YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERK 285 (303)
T ss_pred --HHHHHh---cC-----------CcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhh
Confidence 111111 00 0001112245678999999999999999999999999998877654
No 149
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=1.6e-41 Score=307.96 Aligned_cols=261 Identities=27% Similarity=0.359 Sum_probs=204.8
Q ss_pred HHhcCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcccHHHHHHHHHHhhcC-CCCccceeeeeeecCC
Q 035862 69 EATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVV-SHPNLVKLLGYCSTED 147 (393)
Q Consensus 69 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~ 147 (393)
.+.+.|++.+.||+|+||.||+|.+... +..|++|.+.... .....+.+|+.+++.+ +||||+++++++...+
T Consensus 3 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~-----~~~~aik~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~ 76 (272)
T cd06637 3 DPAGIFELVELVGNGTYGQVYKGRHVKT-----GQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKN 76 (272)
T ss_pred ChhhhhhHHHheeecCCeEEEEEEEcCC-----CcEEEEEEEEcCC-ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecC
Confidence 3456789999999999999999986543 3469999986543 3445678899999998 6999999999987654
Q ss_pred cc--cceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEe
Q 035862 148 ER--GIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLS 225 (393)
Q Consensus 148 ~~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~ 225 (393)
.. ....+++|||+.+++|.+++.......+++..+..++.|++.||+|||+. +++|+||||+||++++++.++|+
T Consensus 77 ~~~~~~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~---~ivh~dl~~~nili~~~~~~~l~ 153 (272)
T cd06637 77 PPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLV 153 (272)
T ss_pred CCCCCcEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHEEECCCCCEEEc
Confidence 32 13578999999999999998765556789999999999999999999998 99999999999999999999999
Q ss_pred eccCCccCCCCCCccccccccccCCccCccccc-----cCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHH
Q 035862 226 DFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIE-----TGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWV 300 (393)
Q Consensus 226 Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~ 300 (393)
|||++........ ......|+..|+|||++. +..++.++||||+||++|+|++|..||....+.......
T Consensus 154 Dfg~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~~--- 228 (272)
T cd06637 154 DFGVSAQLDRTVG--RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLI--- 228 (272)
T ss_pred cCCCceecccccc--cCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHH---
Confidence 9999875432211 223457899999999886 346888999999999999999999999754332211110
Q ss_pred hhcCcCCcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 035862 301 KQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLK 356 (393)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~ 356 (393)
...+ ........++.++.+|+.+||..+|.+|||+.++++|.|
T Consensus 229 ~~~~-------------~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~ 271 (272)
T cd06637 229 PRNP-------------APRLKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMKHPF 271 (272)
T ss_pred hcCC-------------CCCCCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhhCCC
Confidence 0000 000111134577899999999999999999999998865
No 150
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=3.7e-41 Score=303.77 Aligned_cols=255 Identities=29% Similarity=0.418 Sum_probs=203.0
Q ss_pred hcCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcccHHHHHHHHHHhhcCCCCccceeeeeeecCCccc
Q 035862 71 TNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERG 150 (393)
Q Consensus 71 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 150 (393)
.++|++.+.||+|++|.||+|.+.. ...|++|.+.... .....+.+|+.+++.++||||+++++++...+
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~------~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--- 74 (261)
T cd05068 5 RTSIQLLRKLGAGQFGEVWEGLWNN------TTPVAVKTLKPGT-MDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEE--- 74 (261)
T ss_pred hhheeeEEEecccCCccEEEEEecC------CeEEEEEeeCCCc-ccHHHHHHHHHHHHHCCCCCccceeEEEecCC---
Confidence 3569999999999999999998542 2358999987644 33566889999999999999999999987766
Q ss_pred ceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCC
Q 035862 151 IQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLA 230 (393)
Q Consensus 151 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a 230 (393)
..+++|||+.+++|.+++.......+++..+..++.|++.||.+||+. +++||||||+||++++++.++|+|||++
T Consensus 75 -~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~ 150 (261)
T cd05068 75 -PIYIVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQ---NYIHRDLAARNVLVGENNICKVADFGLA 150 (261)
T ss_pred -CeeeeeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCcceEEEcCCCCEEECCcceE
Confidence 459999999999999999665555789999999999999999999998 9999999999999999999999999999
Q ss_pred ccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHh-CCCccCCCCchhhhHHHHHHhhcCcCCcc
Q 035862 231 REGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILT-GRRVLERNRPTMEQKLLEWVKQFPADGKK 309 (393)
Q Consensus 231 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 309 (393)
......... .......+..|+|||.+.+..++.++||||||+++|+|++ |+.||......... .......
T Consensus 151 ~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~--~~~~~~~------ 221 (261)
T cd05068 151 RVIKEDIYE-AREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVL--QQVDQGY------ 221 (261)
T ss_pred EEccCCccc-ccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHH--HHHHcCC------
Confidence 765422111 1111223457999999998899999999999999999999 99999754332111 1111110
Q ss_pred cccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 035862 310 FSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKL 357 (393)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~ 357 (393)
....+..++..+.+++.+||+.+|.+||++.++++.|+.
T Consensus 222 ---------~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~ 260 (261)
T cd05068 222 ---------RMPCPPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLED 260 (261)
T ss_pred ---------CCCCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhc
Confidence 001122345789999999999999999999999998864
No 151
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=4.2e-42 Score=319.56 Aligned_cols=245 Identities=28% Similarity=0.392 Sum_probs=191.4
Q ss_pred ceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCc---ccHHHHHHHHH-HhhcCCCCccceeeeeeecCCcccceE
Q 035862 78 LKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL---QGHKQWLAEVQ-FLGVVSHPNLVKLLGYCSTEDERGIQR 153 (393)
Q Consensus 78 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~-~l~~l~h~niv~~~~~~~~~~~~~~~~ 153 (393)
+.||+|+||+||+|.+..++ ..||+|.+..... .....+..|.. +++.++||||+++++.+...+ ..
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~----~~ 71 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADG-----KFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTAD----KL 71 (323)
T ss_pred CeeeeCCCeEEEEEEECCCC-----CEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCC----EE
Confidence 36999999999999975443 4699999875321 12233445544 567899999999999987766 56
Q ss_pred EEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCCccC
Q 035862 154 LLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREG 233 (393)
Q Consensus 154 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~ 233 (393)
++||||+++++|.+++.. ...+++..+..++.||+.||.|||++ ||+||||||+|||++.++.+||+|||++...
T Consensus 72 ~lv~e~~~~g~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---givH~dikp~NIll~~~~~~kl~Dfg~~~~~ 146 (323)
T cd05575 72 YFVLDYVNGGELFFHLQR--ERSFPEPRARFYAAEIASALGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKEG 146 (323)
T ss_pred EEEEcCCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeccCCCccc
Confidence 999999999999998843 45689999999999999999999998 9999999999999999999999999998753
Q ss_pred CCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcCCcccccc
Q 035862 234 PTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKFSMM 313 (393)
Q Consensus 234 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (393)
.... .......||+.|+|||++.+..++.++|||||||++|+|++|..||........ ....... +.
T Consensus 147 ~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~--~~~i~~~-~~-------- 213 (323)
T cd05575 147 IEHS--KTTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEM--YDNILNK-PL-------- 213 (323)
T ss_pred ccCC--CccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHHH--HHHHHcC-CC--------
Confidence 2221 123345799999999999999999999999999999999999999976543211 1111100 00
Q ss_pred cCcccccccCHHHHHHHHHHHHHhcccCCCCCCCH----HHHHHHHH
Q 035862 314 IDPRLRNQYSINAARRVAKLADNCLKKNPEERPTM----NQVVESLK 356 (393)
Q Consensus 314 ~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~----~~~l~~l~ 356 (393)
......+..+.+++.+||+.||.+||++ .++++|.|
T Consensus 214 -------~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~il~~~~ 253 (323)
T cd05575 214 -------RLKPNISVSARHLLEGLLQKDRTKRLGAKDDFLEIKNHVF 253 (323)
T ss_pred -------CCCCCCCHHHHHHHHHHhhcCHHhCCCCCCCHHHHHcCCC
Confidence 0111235788999999999999999987 58887765
No 152
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=2.2e-41 Score=309.05 Aligned_cols=276 Identities=25% Similarity=0.402 Sum_probs=204.9
Q ss_pred cCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcccHHHHHHHHHHhhcCCCCccceeeeeeecCCcccc
Q 035862 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGI 151 (393)
Q Consensus 72 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 151 (393)
..|++.+.||+|+||.||+|.....+ ...+..|++|.+..........+.+|+.+++.++||||+++++++...+..
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~-~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~-- 80 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQ-DNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRR-- 80 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCc-CCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCC--
Confidence 46889999999999999999864322 234557999998776555566788999999999999999999987655433
Q ss_pred eEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCCc
Q 035862 152 QRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAR 231 (393)
Q Consensus 152 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~ 231 (393)
..++||||+++++|.+++... ...+++..++.++.|++.||.|||++ |++||||||+||++++++.+||+|||++.
T Consensus 81 ~~~lv~e~~~~~~L~~~l~~~-~~~l~~~~~~~~~~~l~~aL~~LH~~---~i~H~dlkp~nili~~~~~~~l~dfg~~~ 156 (284)
T cd05081 81 NLRLVMEYLPYGSLRDYLQKH-RERLDHRKLLLYASQICKGMEYLGSK---RYVHRDLATRNILVESENRVKIGDFGLTK 156 (284)
T ss_pred ceEEEEEecCCCCHHHHHHhc-CcCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHhhEEECCCCeEEECCCcccc
Confidence 458999999999999998543 24588999999999999999999998 99999999999999999999999999998
Q ss_pred cCCCCCCcc-ccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcCC---
Q 035862 232 EGPTGDHTH-VSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADG--- 307 (393)
Q Consensus 232 ~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~--- 307 (393)
......... ......++..|+|||++.+..++.++|||||||++|||++|..++........ ..........
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 232 (284)
T cd05081 157 VLPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFM----RMMGNDKQGQMIV 232 (284)
T ss_pred cccCCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhh----hhcccccccccch
Confidence 654332211 11122334569999999988999999999999999999998876643221110 0000000000
Q ss_pred cccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q 035862 308 KKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLA 358 (393)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~ 358 (393)
..+...+........+..++.++.+|+.+||..+|++|||+.++++.|+.+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~ 283 (284)
T cd05081 233 YHLIELLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI 283 (284)
T ss_pred HHHHHHHhcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence 000000011111111223567899999999999999999999999998764
No 153
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=9.5e-42 Score=308.61 Aligned_cols=257 Identities=24% Similarity=0.338 Sum_probs=200.9
Q ss_pred hcCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcccHHHHHHHHHHhhcCCCCccceeeeeeecCCccc
Q 035862 71 TNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERG 150 (393)
Q Consensus 71 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 150 (393)
.++|++.+.||+|+||.||+|.+..+ +..|++|++..........+.+|+.+++.++||||+++++.+...+
T Consensus 8 ~~~y~~~~~lg~g~~g~vy~~~~~~~-----~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~--- 79 (267)
T cd06646 8 QHDYELIQRVGSGTYGDVYKARNLHT-----GELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSRE--- 79 (267)
T ss_pred hhhcchhheeecCCCeEEEEEEECCC-----CeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCC---
Confidence 35799999999999999999986433 3469999987654444556778999999999999999999998766
Q ss_pred ceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCC
Q 035862 151 IQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLA 230 (393)
Q Consensus 151 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a 230 (393)
..++||||+.+++|.+++.. ...+++..+..++.|++.||.|||+. +|+||||+|+||+++.++.++|+|||++
T Consensus 80 -~~~iv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nill~~~~~~~l~dfg~~ 153 (267)
T cd06646 80 -KLWICMEYCGGGSLQDIYHV--TGPLSELQIAYVCRETLQGLAYLHSK---GKMHRDIKGANILLTDNGDVKLADFGVA 153 (267)
T ss_pred -EEEEEEeCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEECcCccc
Confidence 56999999999999998843 34688999999999999999999998 9999999999999999999999999999
Q ss_pred ccCCCCCCccccccccccCCccCccccc---cCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcCC
Q 035862 231 REGPTGDHTHVSTAVVGTYGYAAPEYIE---TGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADG 307 (393)
Q Consensus 231 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 307 (393)
........ ......|+..|+|||.+. ...++.++|+||+||++|+|++|..||....+...... . ..
T Consensus 154 ~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~------~--~~ 223 (267)
T cd06646 154 AKITATIA--KRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFL------M--SK 223 (267)
T ss_pred eeeccccc--ccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhhee------e--ec
Confidence 76432211 123356888999999874 34578899999999999999999999864432211100 0 00
Q ss_pred cccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 035862 308 KKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLK 356 (393)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~ 356 (393)
.. ...+... ....++..+.+|+.+||+.+|++||++++++++++
T Consensus 224 ~~---~~~~~~~--~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l~ 267 (267)
T cd06646 224 SN---FQPPKLK--DKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHLF 267 (267)
T ss_pred CC---CCCCCCc--cccccCHHHHHHHHHHhhCChhhCcCHHHHhcCCC
Confidence 00 0000000 11134578999999999999999999999998763
No 154
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=4.6e-41 Score=301.50 Aligned_cols=248 Identities=29% Similarity=0.491 Sum_probs=193.3
Q ss_pred eecccCCceEEEEEEcCCCCCCCceEEEEEEecCCC-cccHHHHHHHHHHhhcCCCCccceeeeeeecCCcccceEEEEE
Q 035862 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG-LQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVY 157 (393)
Q Consensus 79 ~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv~ 157 (393)
.||+|+||.||+|.+..+ +..+++|.+.... ......+.+|+++++.++||||+++++++.... ..++||
T Consensus 2 ~lg~g~~g~vy~~~~~~~-----~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----~~~lv~ 72 (252)
T cd05084 2 RIGRGNFGEVFSGRLRAD-----NTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQ----PIYIVM 72 (252)
T ss_pred ccCcccCccEEEEEEecC-----CceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCC----CeEEEE
Confidence 699999999999987543 3469999876542 233456889999999999999999999988766 459999
Q ss_pred eecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCCccCCCCC
Q 035862 158 EYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGD 237 (393)
Q Consensus 158 e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~ 237 (393)
||+.+++|.+++... ...+++..++.++.|++.||.|||++ +++||||||+||+++.++.+||+|||++.......
T Consensus 73 e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~ 148 (252)
T cd05084 73 ELVQGGDFLTFLRTE-GPRLKVKELIQMVENAAAGMEYLESK---HCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGV 148 (252)
T ss_pred eeccCCcHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEEcCCCcEEECccccCccccccc
Confidence 999999999998543 34588999999999999999999998 99999999999999999999999999987543221
Q ss_pred CccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHh-CCCccCCCCchhhhHHHHHHhhcCcCCcccccccCc
Q 035862 238 HTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILT-GRRVLERNRPTMEQKLLEWVKQFPADGKKFSMMIDP 316 (393)
Q Consensus 238 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (393)
.........++..|+|||.+.+..++.++||||||+++|+|++ |..||............. .
T Consensus 149 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~~~---~-------------- 211 (252)
T cd05084 149 YASTGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIE---Q-------------- 211 (252)
T ss_pred ccccCCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHHHH---c--------------
Confidence 1111111223456999999998899999999999999999998 888886543322111111 0
Q ss_pred ccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 035862 317 RLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLK 356 (393)
Q Consensus 317 ~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~ 356 (393)
......+..++..+.+|+.+||+.+|++|||+.++++.|.
T Consensus 212 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 251 (252)
T cd05084 212 GVRLPCPELCPDAVYRLMERCWEYDPGQRPSFSTVHQELQ 251 (252)
T ss_pred CCCCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence 0011112234578999999999999999999999998764
No 155
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=3.5e-41 Score=307.91 Aligned_cols=257 Identities=26% Similarity=0.424 Sum_probs=204.1
Q ss_pred CCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCc---ccHHHHHHHHHHhhcCCCCccceeeeeeecCCcc
Q 035862 73 GFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL---QGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDER 149 (393)
Q Consensus 73 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 149 (393)
.|+..+.||.|+||+||+|.+..+ +..+|+|.+..... .....+.+|+.+++.++|+||+.+++.+...+
T Consensus 1 ~~~~~~~lg~G~~g~vy~~~~~~~-----~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~-- 73 (285)
T cd05632 1 TFRQYRVLGKGGFGEVCACQVRAT-----GKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKD-- 73 (285)
T ss_pred CceEEEEEecCCCeEEEEEEECCC-----CcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCC--
Confidence 377788999999999999987543 34699999865422 22344678999999999999999999888766
Q ss_pred cceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccC
Q 035862 150 GIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGL 229 (393)
Q Consensus 150 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~ 229 (393)
..++||||+.+++|.+++.......+++..+..++.|++.||.|||+. +|+||||||+||++++++.++|+|||+
T Consensus 74 --~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~---~iiH~dikp~Nili~~~~~~kl~Dfg~ 148 (285)
T cd05632 74 --ALCLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRE---NTVYRDLKPENILLDDYGHIRISDLGL 148 (285)
T ss_pred --EEEEEEEeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEECCCCCEEEecCCc
Confidence 569999999999999988765556799999999999999999999998 999999999999999999999999999
Q ss_pred CccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcCCcc
Q 035862 230 AREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKK 309 (393)
Q Consensus 230 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 309 (393)
+....... ......|+..|+|||++.+..++.++|+|||||++|+|++|..||............. ......
T Consensus 149 ~~~~~~~~---~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~--~~~~~~--- 220 (285)
T cd05632 149 AVKIPEGE---SIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVD--RRVLET--- 220 (285)
T ss_pred ceecCCCC---cccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH--Hhhhcc---
Confidence 86543221 1234578999999999998899999999999999999999999997654332211111 110000
Q ss_pred cccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCC-----HHHHHHHHHHH
Q 035862 310 FSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPT-----MNQVVESLKLA 358 (393)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps-----~~~~l~~l~~~ 358 (393)
...++..++..+.+|+..||+.||++||+ +.+++.|.+..
T Consensus 221 ---------~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~ 265 (285)
T cd05632 221 ---------EEVYSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRHPFFR 265 (285)
T ss_pred ---------ccccCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcChhhh
Confidence 00112234577899999999999999999 88999986653
No 156
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=3.4e-41 Score=302.89 Aligned_cols=253 Identities=26% Similarity=0.411 Sum_probs=204.8
Q ss_pred CCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCC--CcccHHHHHHHHHHhhcCCCCccceeeeeeecCCccc
Q 035862 73 GFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNH--GLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERG 150 (393)
Q Consensus 73 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 150 (393)
+|.+.+.||+|++|.||+|.+..++ ..|++|.+... .......+.+|+++++.++||||+++++.+...+
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~-----~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--- 72 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADK-----RVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKG--- 72 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCC-----cEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCC---
Confidence 4788899999999999999875443 45999987643 2334566788999999999999999999988765
Q ss_pred ceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCC
Q 035862 151 IQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLA 230 (393)
Q Consensus 151 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a 230 (393)
..++||||+++++|.+++.......+++..++.++.|++.||.|||+. |++|+||||+||+++.++.++|+|||++
T Consensus 73 -~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~---~i~h~dl~~~nili~~~~~~~l~df~~~ 148 (256)
T cd08529 73 -KLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSK---KILHRDIKSLNLFLDAYDNVKIGDLGVA 148 (256)
T ss_pred -EEEEEEEeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEeCCCCEEEcccccc
Confidence 569999999999999999765556789999999999999999999998 9999999999999999999999999998
Q ss_pred ccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcCCccc
Q 035862 231 REGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKF 310 (393)
Q Consensus 231 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (393)
........ ......|++.|+|||++.+..++.++|+||||+++|+|++|..||....... .......
T Consensus 149 ~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~---~~~~~~~-------- 215 (256)
T cd08529 149 KLLSDNTN--FANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGA---LILKIIR-------- 215 (256)
T ss_pred eeccCccc--hhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHc--------
Confidence 76543322 2234568899999999999899999999999999999999999997654221 1111100
Q ss_pred ccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 035862 311 SMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLK 356 (393)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~ 356 (393)
......+..++..+.+++.+||+.+|++||++.+++++.+
T Consensus 216 ------~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~ 255 (256)
T cd08529 216 ------GVFPPVSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRNPS 255 (256)
T ss_pred ------CCCCCCccccCHHHHHHHHHHccCCcccCcCHHHHhhCCC
Confidence 0011112235678999999999999999999999998743
No 157
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=6.4e-41 Score=301.54 Aligned_cols=249 Identities=26% Similarity=0.408 Sum_probs=195.6
Q ss_pred eecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCc--ccHHHHHHHHHHhhcCCCCccceeeeeeecCCcccceEEEE
Q 035862 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL--QGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLV 156 (393)
Q Consensus 79 ~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv 156 (393)
.||+|+||.||+|.+.. ......+++|++..... .....+.+|+.+++.+.||||+++++++..+ ..++|
T Consensus 2 ~lg~G~~g~v~~~~~~~---~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~lv 73 (257)
T cd05116 2 ELGSGNFGTVKKGMYKM---KKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICEAE-----SWMLV 73 (257)
T ss_pred cCCCcCCcceEEeEEec---CCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCC-----CcEEE
Confidence 58999999999997642 23456799999865432 2345678899999999999999999987543 34899
Q ss_pred EeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCCccCCCC
Q 035862 157 YEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTG 236 (393)
Q Consensus 157 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~ 236 (393)
|||+.+++|.+++.. ...+++..+..++.|++.||.|||++ +++||||||.||+++.++.+||+|||++......
T Consensus 74 ~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~ 148 (257)
T cd05116 74 MELAELGPLNKFLQK--NKHVTEKNITELVHQVSMGMKYLEET---NFVHRDLAARNVLLVTQHYAKISDFGLSKALGAD 148 (257)
T ss_pred EecCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchhhEEEcCCCeEEECCCccccccCCC
Confidence 999999999999843 34688999999999999999999998 9999999999999999999999999999765433
Q ss_pred CCcc-ccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHh-CCCccCCCCchhhhHHHHHHhhcCcCCccccccc
Q 035862 237 DHTH-VSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILT-GRRVLERNRPTMEQKLLEWVKQFPADGKKFSMMI 314 (393)
Q Consensus 237 ~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (393)
.... ......++..|+|||.+....++.++|||||||++|||++ |..||........ ......
T Consensus 149 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~---~~~i~~------------ 213 (257)
T cd05116 149 ENYYKAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEV---TQMIES------------ 213 (257)
T ss_pred CCeeeecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHH---HHHHHC------------
Confidence 2211 1122334578999999988889999999999999999998 9999976543221 111111
Q ss_pred CcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 035862 315 DPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKL 357 (393)
Q Consensus 315 ~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~ 357 (393)
......+..++.++.++|.+||+.||++||++.+|.+.|..
T Consensus 214 --~~~~~~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~ 254 (257)
T cd05116 214 --GERMECPQRCPPEMYDLMKLCWTYGVDERPGFAVVELRLRN 254 (257)
T ss_pred --CCCCCCCCCCCHHHHHHHHHHhccCchhCcCHHHHHHHHhc
Confidence 00111222356789999999999999999999999998864
No 158
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=4.1e-41 Score=316.95 Aligned_cols=264 Identities=24% Similarity=0.336 Sum_probs=195.7
Q ss_pred hcCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcccHHHHHHHHHHhhcCCCCccceeeeeeecCCccc
Q 035862 71 TNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERG 150 (393)
Q Consensus 71 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 150 (393)
..+|.+.+.||+|+||.||+|..... +..||+|..... ....|+.+++.++||||+++++++...+
T Consensus 65 ~~~y~~~~~lg~G~~g~Vy~~~~~~~-----~~~valK~~~~~------~~~~E~~~l~~l~h~~iv~~~~~~~~~~--- 130 (357)
T PHA03209 65 SLGYTVIKTLTPGSEGRVFVATKPGQ-----PDPVVLKIGQKG------TTLIEAMLLQNVNHPSVIRMKDTLVSGA--- 130 (357)
T ss_pred hcCcEEEEEecCCCCeEEEEEEECCC-----CceEEEEeCCcc------ccHHHHHHHHhCCCCCCcChhheEEeCC---
Confidence 45799999999999999999996543 345899975432 2346899999999999999999998776
Q ss_pred ceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCC
Q 035862 151 IQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLA 230 (393)
Q Consensus 151 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a 230 (393)
..++|||++. ++|.+++... ...+++..++.++.||+.||.|||+. +|+||||||+|||++.++.+||+|||++
T Consensus 131 -~~~lv~e~~~-~~l~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a 204 (357)
T PHA03209 131 -ITCMVLPHYS-SDLYTYLTKR-SRPLPIDQALIIEKQILEGLRYLHAQ---RIIHRDVKTENIFINDVDQVCIGDLGAA 204 (357)
T ss_pred -eeEEEEEccC-CcHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEecCccc
Confidence 4599999994 5888888543 34689999999999999999999998 9999999999999999999999999998
Q ss_pred ccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchh--------hhHHHHHHhh
Q 035862 231 REGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTM--------EQKLLEWVKQ 302 (393)
Q Consensus 231 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~--------~~~~~~~~~~ 302 (393)
....... ......||..|+|||++.+..++.++|||||||++|||+++..++....+.. ...+......
T Consensus 205 ~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~ 281 (357)
T PHA03209 205 QFPVVAP---AFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIIST 281 (357)
T ss_pred cccccCc---ccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHH
Confidence 7532221 1234578999999999999999999999999999999998655543222211 1111111111
Q ss_pred cCcCCcccc---------cccC--ccccc-------ccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 035862 303 FPADGKKFS---------MMID--PRLRN-------QYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKL 357 (393)
Q Consensus 303 ~~~~~~~~~---------~~~~--~~~~~-------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~ 357 (393)
.......+. .+++ ...+. ......+.++.+||.+||+.||.+|||+.++++|.|.
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~hp~f 354 (357)
T PHA03209 282 LKVHPEEFPRDPGSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILNYPMF 354 (357)
T ss_pred hccChhhcCCCCccHHHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHhcCchh
Confidence 111110000 0000 00000 0011345677889999999999999999999999875
No 159
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=1.2e-41 Score=316.28 Aligned_cols=250 Identities=24% Similarity=0.371 Sum_probs=196.8
Q ss_pred CCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCC---cccHHHHHHHHHHhhcCC-CCccceeeeeeecCCc
Q 035862 73 GFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG---LQGHKQWLAEVQFLGVVS-HPNLVKLLGYCSTEDE 148 (393)
Q Consensus 73 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~ 148 (393)
+|+..+.||+|+||.||+|.+..+ +..||+|++.... ......+..|..++..+. |++|+++++++...+
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~-----~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~- 74 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGT-----DELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVD- 74 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCC-----CCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCC-
Confidence 477889999999999999986543 3469999987532 223345677888888876 577888988887766
Q ss_pred ccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeecc
Q 035862 149 RGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFG 228 (393)
Q Consensus 149 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg 228 (393)
..++||||+++++|.+++. ....+++..++.++.|++.||.|||+. |++||||||+|||++.++.+||+|||
T Consensus 75 ---~~~lv~Ey~~~g~L~~~i~--~~~~l~~~~~~~i~~qi~~al~~lH~~---~ivHrDikp~Nill~~~~~ikL~Dfg 146 (323)
T cd05615 75 ---RLYFVMEYVNGGDLMYHIQ--QVGKFKEPQAVFYAAEISVGLFFLHRR---GIIYRDLKLDNVMLDSEGHIKIADFG 146 (323)
T ss_pred ---EEEEEEcCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeccc
Confidence 5699999999999999884 335689999999999999999999998 99999999999999999999999999
Q ss_pred CCccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcCCc
Q 035862 229 LAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGK 308 (393)
Q Consensus 229 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 308 (393)
++........ ......||+.|+|||++.+..++.++|||||||++|+|++|..||........ ...... ..
T Consensus 147 ~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~--~~~i~~-~~---- 217 (323)
T cd05615 147 MCKEHMVDGV--TTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDEL--FQSIME-HN---- 217 (323)
T ss_pred cccccCCCCc--cccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHH--HHHHHh-CC----
Confidence 9875322211 22345689999999999999999999999999999999999999976543211 111111 00
Q ss_pred ccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCC-----HHHHHHHHH
Q 035862 309 KFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPT-----MNQVVESLK 356 (393)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps-----~~~~l~~l~ 356 (393)
..++..++.++.+++.+||+.+|.+|++ ..++.+|.+
T Consensus 218 -----------~~~p~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~ 259 (323)
T cd05615 218 -----------VSYPKSLSKEAVSICKGLMTKHPSKRLGCGPEGERDIREHAF 259 (323)
T ss_pred -----------CCCCccCCHHHHHHHHHHcccCHhhCCCCCCCCHHHHhcCcc
Confidence 0112234577899999999999999997 467777744
No 160
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=7.9e-41 Score=309.87 Aligned_cols=267 Identities=27% Similarity=0.423 Sum_probs=206.9
Q ss_pred cCCcccceecccCCceEEEEEEcCCC--CCCCceEEEEEEecCCC-cccHHHHHHHHHHhhcC-CCCccceeeeeeecCC
Q 035862 72 NGFNRMLKIGEGGFGSVYKGTIRPLD--GRGEPLVVAVKKLNNHG-LQGHKQWLAEVQFLGVV-SHPNLVKLLGYCSTED 147 (393)
Q Consensus 72 ~~y~~~~~lg~G~~g~Vy~~~~~~~~--~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~ 147 (393)
++|.+.+.||+|+||.||+|...... .......+++|.+.... ......+..|+.+++.+ +||||+++++++...+
T Consensus 12 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 91 (314)
T cd05099 12 DRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQEG 91 (314)
T ss_pred HHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccCC
Confidence 46889999999999999999864322 12345678999887542 23345678899999999 5999999999987665
Q ss_pred cccceEEEEEeecCCCChHHHHhhcC--------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCC
Q 035862 148 ERGIQRLLVYEYMPNRSLEDRLFSRA--------------QPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSN 213 (393)
Q Consensus 148 ~~~~~~~lv~e~~~~~~L~~~l~~~~--------------~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~N 213 (393)
..+++|||+.+++|.+++.... ...+++..+..++.|++.||.|||++ |++||||||+|
T Consensus 92 ----~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp~N 164 (314)
T cd05099 92 ----PLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESR---RCIHRDLAARN 164 (314)
T ss_pred ----ceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHC---Ceeecccccee
Confidence 4599999999999999996432 23578889999999999999999998 99999999999
Q ss_pred eEeCCCCceEEeeccCCccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHh-CCCccCCCCchh
Q 035862 214 VLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILT-GRRVLERNRPTM 292 (393)
Q Consensus 214 Ill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ellt-g~~pf~~~~~~~ 292 (393)
||+++++.+||+|||+++...............++..|+|||.+.+..++.++|||||||++|+|++ |..||.......
T Consensus 165 ill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~ 244 (314)
T cd05099 165 VLVTEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEE 244 (314)
T ss_pred EEEcCCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCHHH
Confidence 9999999999999999976543222211222234567999999988899999999999999999999 888886544322
Q ss_pred hhHHHHHHhhcCcCCcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhh
Q 035862 293 EQKLLEWVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQES 362 (393)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~~~~~ 362 (393)
.. ...... . ....+..++.++.+++.+||..+|++||++.++++.|+.+....
T Consensus 245 ~~---~~~~~~----~----------~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~~ 297 (314)
T cd05099 245 LF---KLLREG----H----------RMDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVLAAV 297 (314)
T ss_pred HH---HHHHcC----C----------CCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHHh
Confidence 11 111110 0 00112234567889999999999999999999999999887644
No 161
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=6.4e-41 Score=302.05 Aligned_cols=253 Identities=31% Similarity=0.451 Sum_probs=200.9
Q ss_pred cCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcccHHHHHHHHHHhhcCCCCccceeeeeeecCCcccc
Q 035862 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGI 151 (393)
Q Consensus 72 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 151 (393)
++|++.+.||+|+||.||+|.+... ..+++|.+..... ....+.+|+.+++.++|+|++++++++...
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~------~~~~~k~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~----- 73 (260)
T cd05070 6 ESLQLIKKLGNGQFGEVWMGTWNGN------TKVAVKTLKPGTM-SPESFLEEAQIMKKLRHDKLVQLYAVVSEE----- 73 (260)
T ss_pred HHhhhhheeccccCceEEEEEecCC------ceeEEEEecCCCC-CHHHHHHHHHHHHhcCCCceEEEEeEECCC-----
Confidence 4689999999999999999976422 2489998876432 345688999999999999999999987432
Q ss_pred eEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCCc
Q 035862 152 QRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAR 231 (393)
Q Consensus 152 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~ 231 (393)
..+++|||+.+++|.+++.......+++..++.++.|++.||.|||++ +++||||||+||++++++.++|+|||++.
T Consensus 74 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~Nili~~~~~~~l~dfg~~~ 150 (260)
T cd05070 74 PIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERM---NYIHRDLRSANILVGDGLVCKIADFGLAR 150 (260)
T ss_pred CcEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEEeCCceEEeCCceeee
Confidence 348999999999999999765556689999999999999999999998 99999999999999999999999999997
Q ss_pred cCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHh-CCCccCCCCchhhhHHHHHHhhcCcCCccc
Q 035862 232 EGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILT-GRRVLERNRPTMEQKLLEWVKQFPADGKKF 310 (393)
Q Consensus 232 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (393)
........ ......++..|+|||.+.+..++.++||||||+++|+|++ |..||....... .......
T Consensus 151 ~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~---~~~~~~~-------- 218 (260)
T cd05070 151 LIEDNEYT-ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNRE---VLEQVER-------- 218 (260)
T ss_pred eccCcccc-cccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHH---HHHHHHc--------
Confidence 64332211 1122345668999999988889999999999999999999 889997543321 1111111
Q ss_pred ccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 035862 311 SMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKL 357 (393)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~ 357 (393)
......+...+..+.+|+.+||..+|++|||+.++.+.|+.
T Consensus 219 ------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 219 ------GYRMPCPQDCPISLHELMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred ------CCCCCCCCcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 00111222345789999999999999999999999988864
No 162
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=8.3e-41 Score=307.29 Aligned_cols=261 Identities=28% Similarity=0.417 Sum_probs=202.2
Q ss_pred cCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCC-CcccHHHHHHHHHHhhcC-CCCccceeeeeeecCCcc
Q 035862 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNH-GLQGHKQWLAEVQFLGVV-SHPNLVKLLGYCSTEDER 149 (393)
Q Consensus 72 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~ 149 (393)
++|++.+.||+|+||.||+|.+...+ ....+++|.+... .......+.+|+.++.++ +||||+++++++...+
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~---~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~-- 76 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDG---LKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRG-- 76 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCC---CcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCC--
Confidence 57899999999999999999875432 2234677777642 223345678899999999 6999999999987765
Q ss_pred cceEEEEEeecCCCChHHHHhhcC--------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeE
Q 035862 150 GIQRLLVYEYMPNRSLEDRLFSRA--------------QPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVL 215 (393)
Q Consensus 150 ~~~~~lv~e~~~~~~L~~~l~~~~--------------~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIl 215 (393)
..+++|||+++++|.+++.... ...+++..++.++.|++.||+|||+. |++||||||+|||
T Consensus 77 --~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nil 151 (297)
T cd05089 77 --YLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEK---QFIHRDLAARNVL 151 (297)
T ss_pred --cceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCcCCcceEE
Confidence 4599999999999999985422 13578899999999999999999998 9999999999999
Q ss_pred eCCCCceEEeeccCCccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHh-CCCccCCCCchhhh
Q 035862 216 LDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILT-GRRVLERNRPTMEQ 294 (393)
Q Consensus 216 l~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ellt-g~~pf~~~~~~~~~ 294 (393)
+++++.+||+|||++....... .......+..|+|||++.+..++.++|||||||++|||++ |..||........
T Consensus 152 l~~~~~~kl~dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~- 227 (297)
T cd05089 152 VGENLASKIADFGLSRGEEVYV---KKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAEL- 227 (297)
T ss_pred ECCCCeEEECCcCCCcccccee---ccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHH-
Confidence 9999999999999986422110 1111233457999999988899999999999999999997 9999975433211
Q ss_pred HHHHHHhhcCcCCcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhh
Q 035862 295 KLLEWVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQES 362 (393)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~~~~~ 362 (393)
....... .....+..++..+.+|+.+||+.+|.+||++.++++.|..+.+..
T Consensus 228 -~~~~~~~---------------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~~ 279 (297)
T cd05089 228 -YEKLPQG---------------YRMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLEAR 279 (297)
T ss_pred -HHHHhcC---------------CCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhh
Confidence 1111100 011112235578899999999999999999999999999888655
No 163
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=9.9e-42 Score=322.42 Aligned_cols=262 Identities=23% Similarity=0.291 Sum_probs=202.0
Q ss_pred HHHHHhcCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCC---cccHHHHHHHHHHhhcCCCCccceeeee
Q 035862 66 ELREATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG---LQGHKQWLAEVQFLGVVSHPNLVKLLGY 142 (393)
Q Consensus 66 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~ 142 (393)
++....++|++.+.||+|+||.||+|.+..++ ..+|+|.+.... ......+.+|+.+++.++||||+++++.
T Consensus 37 ~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~-----~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~ 111 (371)
T cd05622 37 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTR-----KVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYA 111 (371)
T ss_pred hcCcchhhcEEEEEEeecCCeEEEEEEECCCC-----cEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence 34445688999999999999999999875443 469999986422 1223446789999999999999999999
Q ss_pred eecCCcccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCce
Q 035862 143 CSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKP 222 (393)
Q Consensus 143 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~ 222 (393)
+...+ +.++||||+++++|.+++.. ..+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+
T Consensus 112 ~~~~~----~~~lv~Ey~~gg~L~~~~~~---~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NIll~~~~~i 181 (371)
T cd05622 112 FQDDR----YLYMVMEYMPGGDLVNLMSN---YDVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHL 181 (371)
T ss_pred EEcCC----EEEEEEcCCCCCcHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHEEECCCCCE
Confidence 87765 66999999999999998843 3478889999999999999999998 99999999999999999999
Q ss_pred EEeeccCCccCCCCCCccccccccccCCccCccccccC----CCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHH
Q 035862 223 KLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIETG----HLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLE 298 (393)
Q Consensus 223 kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~ 298 (393)
||+|||++........ .......||+.|+|||++.+. .++.++|||||||++|||++|..||........ ...
T Consensus 182 kL~DfG~a~~~~~~~~-~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~--~~~ 258 (371)
T cd05622 182 KLADFGTCMKMNKEGM-VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGT--YSK 258 (371)
T ss_pred EEEeCCceeEcCcCCc-ccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHH--HHH
Confidence 9999999976533221 123456799999999998654 378999999999999999999999986543211 111
Q ss_pred HHhhcCcCCcccccccCcccccccCHHHHHHHHHHHHHhcccCCCC--CCCHHHHHHHHHH
Q 035862 299 WVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEE--RPTMNQVVESLKL 357 (393)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~--Rps~~~~l~~l~~ 357 (393)
..... .. +.......++..+.++|.+||..++.+ |+++.++++|+|.
T Consensus 259 i~~~~----~~--------~~~~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~~~ 307 (371)
T cd05622 259 IMNHK----NS--------LTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFF 307 (371)
T ss_pred HHcCC----Cc--------ccCCCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCccc
Confidence 11100 00 000011135678899999999844433 7899999999864
No 164
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=4.4e-42 Score=324.20 Aligned_cols=256 Identities=24% Similarity=0.348 Sum_probs=200.4
Q ss_pred cCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCC---cccHHHHHHHHHHhhcCCCCccceeeeeeecCCc
Q 035862 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG---LQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDE 148 (393)
Q Consensus 72 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 148 (393)
++|+..+.||+|+||.||+|....++ ..||+|++.... ......+.+|+.++..++||||+++++.+...+
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~-----~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~- 74 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTG-----HIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKR- 74 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCC-----CEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCC-
Confidence 46899999999999999999875443 469999986432 223456778999999999999999999988766
Q ss_pred ccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeecc
Q 035862 149 RGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFG 228 (393)
Q Consensus 149 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg 228 (393)
..++||||+++++|.+++.. ...+++..++.++.|++.||.|||+. ||+||||||+|||++.+|.+||+|||
T Consensus 75 ---~~~lv~E~~~gg~L~~~l~~--~~~l~~~~~~~~~~qi~~~L~~lH~~---givHrDLkp~NIli~~~~~vkL~DfG 146 (360)
T cd05627 75 ---NLYLIMEFLPGGDMMTLLMK--KDTLSEEATQFYIAETVLAIDAIHQL---GFIHRDIKPDNLLLDAKGHVKLSDFG 146 (360)
T ss_pred ---EEEEEEeCCCCccHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEeecc
Confidence 56999999999999999843 45689999999999999999999998 99999999999999999999999999
Q ss_pred CCccCCCCCCc---------------------------------cccccccccCCccCccccccCCCCchhhHHHHHHHH
Q 035862 229 LAREGPTGDHT---------------------------------HVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVL 275 (393)
Q Consensus 229 ~a~~~~~~~~~---------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil 275 (393)
++......... ......+||+.|+|||++.+..++.++|||||||++
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil 226 (360)
T cd05627 147 LCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIM 226 (360)
T ss_pred CCcccccccccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceecccccee
Confidence 98754221100 011235799999999999999999999999999999
Q ss_pred HHHHhCCCccCCCCchhhhHHH-HHHhhcCcCCcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCC---CHHHH
Q 035862 276 YEILTGRRVLERNRPTMEQKLL-EWVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERP---TMNQV 351 (393)
Q Consensus 276 ~elltg~~pf~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rp---s~~~~ 351 (393)
|||++|+.||....+......+ .+..... +.+ ....+.++.+||.+|+ .||.+|+ ++.++
T Consensus 227 yel~tG~~Pf~~~~~~~~~~~i~~~~~~~~---------~p~------~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei 290 (360)
T cd05627 227 YEMLIGYPPFCSETPQETYRKVMNWKETLV---------FPP------EVPISEKAKDLILRFC-TDSENRIGSNGVEEI 290 (360)
T ss_pred eecccCCCCCCCCCHHHHHHHHHcCCCcee---------cCC------CCCCCHHHHHHHHHhc-cChhhcCCCCCHHHH
Confidence 9999999999765543221111 1000000 000 0124577889999976 5999998 58999
Q ss_pred HHHHHH
Q 035862 352 VESLKL 357 (393)
Q Consensus 352 l~~l~~ 357 (393)
++|.|.
T Consensus 291 ~~hp~f 296 (360)
T cd05627 291 KSHPFF 296 (360)
T ss_pred hcCCCC
Confidence 999763
No 165
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=2.3e-41 Score=317.41 Aligned_cols=273 Identities=24% Similarity=0.331 Sum_probs=202.7
Q ss_pred HHHhcCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCc--ccHHHHHHHHHHhhcCCCCccceeeeeeec
Q 035862 68 REATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL--QGHKQWLAEVQFLGVVSHPNLVKLLGYCST 145 (393)
Q Consensus 68 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 145 (393)
.+..++|++++.||.|+||.||+|.+..++ ..||+|.+..... .....+.+|+.+++.++||||+++++++..
T Consensus 11 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~-----~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 85 (343)
T cd07878 11 WEVPERYQNLTPVGSGAYGSVCSAYDTRLR-----QKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTP 85 (343)
T ss_pred hhhhhhhhhheecccCCCeEEEEEEECCCC-----CEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcc
Confidence 345678999999999999999999865433 4699999875422 233456789999999999999999998764
Q ss_pred CCc--ccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceE
Q 035862 146 EDE--RGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPK 223 (393)
Q Consensus 146 ~~~--~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~k 223 (393)
... .....+++++++ +++|.+++. ...+++..++.++.|++.||.|||++ +|+||||||+|||++.++.+|
T Consensus 86 ~~~~~~~~~~~~~~~~~-~~~l~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrdikp~Nil~~~~~~~k 158 (343)
T cd07878 86 ATSIENFNEVYLVTNLM-GADLNNIVK---CQKLSDEHVQFLIYQLLRGLKYIHSA---GIIHRDLKPSNVAVNEDCELR 158 (343)
T ss_pred cccccccCcEEEEeecC-CCCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecccCChhhEEECCCCCEE
Confidence 332 122458999998 779988773 34589999999999999999999998 999999999999999999999
Q ss_pred EeeccCCccCCCCCCccccccccccCCccCcccccc-CCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhh
Q 035862 224 LSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIET-GHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQ 302 (393)
Q Consensus 224 l~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~ 302 (393)
|+|||++...... .....|++.|+|||++.+ ..++.++|||||||++|+|++|..||......... ......
T Consensus 159 l~Dfg~~~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~--~~~~~~ 231 (343)
T cd07878 159 ILDFGLARQADDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQL--KRIMEV 231 (343)
T ss_pred EcCCccceecCCC-----cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHH--HHHHHH
Confidence 9999999764332 234578999999999876 57899999999999999999999999765432111 111100
Q ss_pred cCcCCccc---------ccccC--ccccc----ccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHH
Q 035862 303 FPADGKKF---------SMMID--PRLRN----QYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAV 359 (393)
Q Consensus 303 ~~~~~~~~---------~~~~~--~~~~~----~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~~ 359 (393)
........ ..... +.... ......++.+.+|+.+||+.||.+|||+.+++.|.|...
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~hp~~~~ 303 (343)
T cd07878 232 VGTPSPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAHPYFSQ 303 (343)
T ss_pred hCCCCHHHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhc
Confidence 00000000 00000 00000 000012456789999999999999999999999998764
No 166
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=4.4e-41 Score=308.94 Aligned_cols=258 Identities=24% Similarity=0.363 Sum_probs=207.5
Q ss_pred hcCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcccHHHHHHHHHHhhcCCCCccceeeeeeecCCccc
Q 035862 71 TNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERG 150 (393)
Q Consensus 71 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 150 (393)
..+|++.+.||+|+||.||+|.+...+ ..|++|.+..........+.+|+.+++.+.||||+++++.+....
T Consensus 19 ~~~y~~~~~lg~g~~~~v~~~~~~~~~-----~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~--- 90 (296)
T cd06654 19 KKKYTRFEKIGQGASGTVYTAMDVATG-----QEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGD--- 90 (296)
T ss_pred ccceeeEEEecCCCCeEEEEEEECCCC-----cEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCC---
Confidence 457999999999999999999865333 469999887655555567889999999999999999999988665
Q ss_pred ceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCC
Q 035862 151 IQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLA 230 (393)
Q Consensus 151 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a 230 (393)
..++||||+.+++|.+++.. ..+++..+..++.|++.||.|||+. |++||||||+||+++.++.++|+|||++
T Consensus 91 -~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~i~~ql~~aL~~LH~~---gi~H~dLkp~Nill~~~~~~kl~dfg~~ 163 (296)
T cd06654 91 -ELWVVMEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFC 163 (296)
T ss_pred -EEEEeecccCCCCHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEEECccccc
Confidence 56999999999999998843 3478899999999999999999998 9999999999999999999999999998
Q ss_pred ccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcCCccc
Q 035862 231 REGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKF 310 (393)
Q Consensus 231 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (393)
........ ......+++.|+|||.+.+..++.++|||||||++|+|++|+.||....+.... ...... +
T Consensus 164 ~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~--~~~~~~----~--- 232 (296)
T cd06654 164 AQITPEQS--KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRAL--YLIATN----G--- 232 (296)
T ss_pred hhcccccc--ccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhH--HHHhcC----C---
Confidence 75432221 123357889999999998888999999999999999999999999765432111 111100 0
Q ss_pred ccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHh
Q 035862 311 SMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQ 360 (393)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~~~ 360 (393)
......+..++..+.+++.+||..||++||++.+++++.+....
T Consensus 233 ------~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~~~~~~~ 276 (296)
T cd06654 233 ------TPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKIA 276 (296)
T ss_pred ------CCCCCCccccCHHHHHHHHHHCcCCcccCcCHHHHhhChhhhcc
Confidence 00011122455778999999999999999999999999886643
No 167
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=3.9e-41 Score=310.12 Aligned_cols=271 Identities=24% Similarity=0.375 Sum_probs=203.2
Q ss_pred hcCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCC-cccHHHHHHHHHHhhcCCCCccceeeeeeecCCcc
Q 035862 71 TNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG-LQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDER 149 (393)
Q Consensus 71 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 149 (393)
.++|.+.+.||.|+||.||+|.+..++ ..||+|.+.... ......+.+|+.+++.++||||+++++++...+
T Consensus 5 ~~~y~~~~~lg~g~~g~vy~~~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~-- 77 (301)
T cd07873 5 LETYIKLDKLGEGTYATVYKGRSKLTD-----NLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEK-- 77 (301)
T ss_pred ccceEEeeEeccCcCEEEEEEEEcCCC-----cEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCC--
Confidence 357999999999999999999865433 469999886442 223345678999999999999999999998766
Q ss_pred cceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccC
Q 035862 150 GIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGL 229 (393)
Q Consensus 150 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~ 229 (393)
..++||||+. ++|.+++... ...+++..++.++.|++.||.|||+. +++|+||||+||++++++.++|+|||+
T Consensus 78 --~~~lv~e~~~-~~l~~~l~~~-~~~~~~~~~~~~~~qi~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~ 150 (301)
T cd07873 78 --SLTLVFEYLD-KDLKQYLDDC-GNSINMHNVKLFLFQLLRGLNYCHRR---KVLHRDLKPQNLLINERGELKLADFGL 150 (301)
T ss_pred --eEEEEEeccc-cCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHHHEEECCCCcEEECcCcc
Confidence 5699999996 5998888543 34588999999999999999999998 999999999999999999999999999
Q ss_pred CccCCCCCCccccccccccCCccCcccccc-CCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcCCc
Q 035862 230 AREGPTGDHTHVSTAVVGTYGYAAPEYIET-GHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGK 308 (393)
Q Consensus 230 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 308 (393)
+........ ......+++.|+|||.+.+ ..++.++|||||||++|+|++|++||..................+...
T Consensus 151 ~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~- 227 (301)
T cd07873 151 ARAKSIPTK--TYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEE- 227 (301)
T ss_pred hhccCCCCC--cccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChh-
Confidence 875432221 1233467889999998865 457889999999999999999999997654432211111111111110
Q ss_pred cccccc---------Cccccc----ccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q 035862 309 KFSMMI---------DPRLRN----QYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLA 358 (393)
Q Consensus 309 ~~~~~~---------~~~~~~----~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~ 358 (393)
....++ .+.... .....++..+.+||.+||+.||.+|||+.++++|.|..
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h~~f~ 290 (301)
T cd07873 228 TWPGILSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHPYFH 290 (301)
T ss_pred hchhhhccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcCcccc
Confidence 000000 000000 11123467889999999999999999999999998764
No 168
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=7.9e-41 Score=300.79 Aligned_cols=251 Identities=29% Similarity=0.447 Sum_probs=198.5
Q ss_pred cCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcccHHHHHHHHHHhhcCCCCccceeeeeeecCCcccc
Q 035862 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGI 151 (393)
Q Consensus 72 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 151 (393)
.+|.+.+.||+|+||.||+|.+... ..+|+|.+.... .....+.+|+.+++.++||||+++++++...+
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~------~~~aik~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~---- 72 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWRGQ------YDVAIKMIKEGS-MSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQR---- 72 (256)
T ss_pred HHeEEeeEecCcccceEEEEEecCC------CcEEEEEcCCCc-ccHHHHHHHHHHHhcCCCCCeeeEEEEEccCC----
Confidence 3588899999999999999976432 249999887543 33467889999999999999999999987666
Q ss_pred eEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCCc
Q 035862 152 QRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAR 231 (393)
Q Consensus 152 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~ 231 (393)
..++||||+.+++|.+++.... ..+++..++.++.|++.||.|||+. +++|+||||+||++++++.+||+|||.+.
T Consensus 73 ~~~lv~e~~~~~~l~~~i~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~d~g~~~ 148 (256)
T cd05113 73 PIYIVTEYMSNGCLLNYLREHG-KRFQPSQLLEMCKDVCEGMAYLESK---QFIHRDLAARNCLVDDQGCVKVSDFGLSR 148 (256)
T ss_pred CcEEEEEcCCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCCEEECCCccce
Confidence 3499999999999999986533 3689999999999999999999998 99999999999999999999999999987
Q ss_pred cCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHh-CCCccCCCCchhhhHHHHHHhhcCcCCccc
Q 035862 232 EGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILT-GRRVLERNRPTMEQKLLEWVKQFPADGKKF 310 (393)
Q Consensus 232 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (393)
........ ......++..|+|||.+.+..++.++|||||||++|+|++ |..||........ ....... ..
T Consensus 149 ~~~~~~~~-~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~---~~~~~~~----~~- 219 (256)
T cd05113 149 YVLDDEYT-SSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSET---VEKVSQG----LR- 219 (256)
T ss_pred ecCCCcee-ecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHH---HHHHhcC----CC-
Confidence 54332211 1122345668999999988889999999999999999998 9999875443211 1111110 00
Q ss_pred ccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 035862 311 SMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESL 355 (393)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l 355 (393)
...+...+..+.+++.+||+.+|.+||++.++++.+
T Consensus 220 ---------~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~ 255 (256)
T cd05113 220 ---------LYRPHLASEKVYAIMYSCWHEKAEERPTFQQLLSSI 255 (256)
T ss_pred ---------CCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHhh
Confidence 001112357889999999999999999999999876
No 169
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=9.9e-42 Score=307.01 Aligned_cols=256 Identities=32% Similarity=0.523 Sum_probs=202.2
Q ss_pred CcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcccHH--HHHHHHHHhhcCCCCccceeeeeeecCCcccc
Q 035862 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHK--QWLAEVQFLGVVSHPNLVKLLGYCSTEDERGI 151 (393)
Q Consensus 74 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~--~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 151 (393)
|++.+.||+|+||+||++..... +..+|+|.+......... ...+|+.+++.++||||+++++++....
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~-----~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~---- 71 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKN-----GQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDN---- 71 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTT-----TEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESS----
T ss_pred CEEeEEEEeCCCEEEEEEEECCC-----CeEEEEEEeccccccccccchhhhhhhccccccccccccccccccccc----
Confidence 67889999999999999996543 346999999877543332 2346999999999999999999998866
Q ss_pred eEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCCc
Q 035862 152 QRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAR 231 (393)
Q Consensus 152 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~ 231 (393)
..++||||+.+++|.+++. ....+++..++.++.|++.||.+||+. +++|+||||+||+++.++.++|+|||.+.
T Consensus 72 ~~~~v~~~~~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~~L~~Lh~~---~i~H~dikp~NIl~~~~~~~~l~Dfg~~~ 146 (260)
T PF00069_consen 72 YLYIVMEYCPGGSLQDYLQ--KNKPLSEEEILKIAYQILEALAYLHSK---GIVHRDIKPENILLDENGEVKLIDFGSSV 146 (260)
T ss_dssp EEEEEEEEETTEBHHHHHH--HHSSBBHHHHHHHHHHHHHHHHHHHHT---TEEESSBSGGGEEESTTSEEEESSGTTTE
T ss_pred ccccccccccccccccccc--ccccccccccccccccccccccccccc---ccccccccccccccccccccccccccccc
Confidence 5689999999999999995 345689999999999999999999999 99999999999999999999999999987
Q ss_pred cCCCCCCccccccccccCCccCccccc-cCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcCCccc
Q 035862 232 EGPTGDHTHVSTAVVGTYGYAAPEYIE-TGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKF 310 (393)
Q Consensus 232 ~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (393)
.. ...........++..|+|||++. +..++.++||||||+++|+|++|..||.......................
T Consensus 147 ~~--~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~-- 222 (260)
T PF00069_consen 147 KL--SENNENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPLPSS-- 222 (260)
T ss_dssp ES--TSTTSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHHH--
T ss_pred cc--cccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhccccccccc--
Confidence 53 11122344567899999999998 88999999999999999999999999986622222222111111000000
Q ss_pred ccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 035862 311 SMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLK 356 (393)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~ 356 (393)
..........+.+++.+||+.||++||++.++++|.|
T Consensus 223 ---------~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~~~~ 259 (260)
T PF00069_consen 223 ---------SQQSREKSEELRDLIKKMLSKDPEQRPSAEELLKHPW 259 (260)
T ss_dssp ---------TTSHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHTSGG
T ss_pred ---------ccccchhHHHHHHHHHHHccCChhHCcCHHHHhcCCC
Confidence 0000011378999999999999999999999999875
No 170
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=6.2e-42 Score=318.74 Aligned_cols=245 Identities=27% Similarity=0.375 Sum_probs=189.9
Q ss_pred ceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCc---ccHHHHHHHH-HHhhcCCCCccceeeeeeecCCcccceE
Q 035862 78 LKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL---QGHKQWLAEV-QFLGVVSHPNLVKLLGYCSTEDERGIQR 153 (393)
Q Consensus 78 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~-~~l~~l~h~niv~~~~~~~~~~~~~~~~ 153 (393)
+.||+|+||+||+|.+..++ ..||+|++..... .....+..|. .+++.++||||+++++++...+ ..
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~-----~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~----~~ 71 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEE-----KFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTAD----KL 71 (325)
T ss_pred CeeeeCCCeEEEEEEECCCC-----CEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCC----eE
Confidence 36999999999999875433 4699999875321 1222334443 4567899999999999988776 56
Q ss_pred EEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCCccC
Q 035862 154 LLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREG 233 (393)
Q Consensus 154 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~ 233 (393)
++||||+.+++|.+++.. ...+++..+..++.||+.||.|||++ ||+||||||+|||++.++.+||+|||++...
T Consensus 72 ~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~qi~~~L~~lH~~---giiHrDlkp~Nili~~~~~~kl~DfG~a~~~ 146 (325)
T cd05602 72 YFVLDYINGGELFYHLQR--ERCFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKEN 146 (325)
T ss_pred EEEEeCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEEccCCCCccc
Confidence 999999999999998843 45678889999999999999999998 9999999999999999999999999998753
Q ss_pred CCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcCCcccccc
Q 035862 234 PTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKFSMM 313 (393)
Q Consensus 234 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (393)
..... .....+||+.|+|||++.+..++.++|||||||++|+|++|..||........ .......+.
T Consensus 147 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~---~~~i~~~~~-------- 213 (325)
T cd05602 147 IEHNG--TTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEM---YDNILNKPL-------- 213 (325)
T ss_pred ccCCC--CcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHHH---HHHHHhCCc--------
Confidence 22211 23356799999999999999999999999999999999999999976543221 111111000
Q ss_pred cCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHH----HHHHHHH
Q 035862 314 IDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMN----QVVESLK 356 (393)
Q Consensus 314 ~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~----~~l~~l~ 356 (393)
.....++..+.+++.+||+.||.+||++. ++++|++
T Consensus 214 -------~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~i~~~~~ 253 (325)
T cd05602 214 -------QLKPNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKNHIF 253 (325)
T ss_pred -------CCCCCCCHHHHHHHHHHcccCHHHCCCCCCCHHHHhcCcc
Confidence 01123457889999999999999999876 6666553
No 171
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=1.1e-40 Score=306.09 Aligned_cols=268 Identities=28% Similarity=0.461 Sum_probs=202.2
Q ss_pred cCCcccceecccCCceEEEEEEcCCCC---------CCCceEEEEEEecCCCc-ccHHHHHHHHHHhhcCCCCccceeee
Q 035862 72 NGFNRMLKIGEGGFGSVYKGTIRPLDG---------RGEPLVVAVKKLNNHGL-QGHKQWLAEVQFLGVVSHPNLVKLLG 141 (393)
Q Consensus 72 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~---------~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~ 141 (393)
++|++.+.||+|+||.||++....... .+....||+|.+..... .....+.+|+++++.++|||++++++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~ 84 (295)
T cd05097 5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLG 84 (295)
T ss_pred HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEE
Confidence 579999999999999999998643221 23445689999876432 23456889999999999999999999
Q ss_pred eeecCCcccceEEEEEeecCCCChHHHHhhcC----------CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCC
Q 035862 142 YCSTEDERGIQRLLVYEYMPNRSLEDRLFSRA----------QPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKT 211 (393)
Q Consensus 142 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~----------~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp 211 (393)
++...+ ..++||||+.+++|.+++.... ...+++..++.++.|++.||.|||+. +++||||||
T Consensus 85 ~~~~~~----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp 157 (295)
T cd05097 85 VCVSDD----PLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASL---NFVHRDLAT 157 (295)
T ss_pred EEcCCC----ccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhc---CeeccccCh
Confidence 997766 4599999999999999985432 12467888999999999999999998 999999999
Q ss_pred CCeEeCCCCceEEeeccCCccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHh--CCCccCCCC
Q 035862 212 SNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILT--GRRVLERNR 289 (393)
Q Consensus 212 ~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ellt--g~~pf~~~~ 289 (393)
+||++++++.+||+|||++................++..|+|||.+.+..++.++|||||||++|+|++ +..||....
T Consensus 158 ~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~ 237 (295)
T cd05097 158 RNCLVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLS 237 (295)
T ss_pred hhEEEcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccC
Confidence 999999999999999999976543322222233455778999999988899999999999999999998 556776433
Q ss_pred chhhhHHHHHHhhcCcCCcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 035862 290 PTMEQKLLEWVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLK 356 (393)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~ 356 (393)
... .............. ......+...+..+.+|+.+||+.||++||++.++++.|.
T Consensus 238 ~~~--~~~~~~~~~~~~~~--------~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~ 294 (295)
T cd05097 238 DEQ--VIENTGEFFRNQGR--------QIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLR 294 (295)
T ss_pred hHH--HHHHHHHhhhhccc--------cccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence 221 11111110000000 0000011124578999999999999999999999998875
No 172
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=6.6e-41 Score=301.02 Aligned_cols=251 Identities=26% Similarity=0.367 Sum_probs=202.2
Q ss_pred CCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCC-CcccHHHHHHHHHHhhcCCCCccceeeeeeecCCcccc
Q 035862 73 GFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNH-GLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGI 151 (393)
Q Consensus 73 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 151 (393)
+|++.+.||.|+||.||++.+..++ ..+++|.+... .......+.+|+.+++.++||||+++++.+...+
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~-----~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~---- 71 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSD-----QKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADG---- 71 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCC-----ceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECC----
Confidence 4888999999999999999865443 45899987543 2234456778999999999999999999998776
Q ss_pred eEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCCc
Q 035862 152 QRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAR 231 (393)
Q Consensus 152 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~ 231 (393)
.++++|||+++++|.+++.......+++..++.++.|++.||.|||++ +++|+||||+||++++++.++|+|||.+.
T Consensus 72 ~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~ 148 (255)
T cd08219 72 HLYIVMEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEK---RVLHRDIKSKNIFLTQNGKVKLGDFGSAR 148 (255)
T ss_pred EEEEEEeeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEECCCCcEEEcccCcce
Confidence 569999999999999988665556689999999999999999999998 99999999999999999999999999987
Q ss_pred cCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcCCcccc
Q 035862 232 EGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKFS 311 (393)
Q Consensus 232 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (393)
....... ......|++.|+|||++.+..++.++|+||||+++|+|++|..||........ .......
T Consensus 149 ~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~--~~~~~~~--------- 215 (255)
T cd08219 149 LLTSPGA--YACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNL--ILKVCQG--------- 215 (255)
T ss_pred eeccccc--ccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHHH--HHHHhcC---------
Confidence 6533221 22345788999999999988899999999999999999999999975433211 1111100
Q ss_pred cccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 035862 312 MMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVES 354 (393)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~ 354 (393)
.....+..++..+.+|+.+||+.||++||++.+++..
T Consensus 216 ------~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 216 ------SYKPLPSHYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred ------CCCCCCcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 0011122345778999999999999999999999864
No 173
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=7.5e-42 Score=318.30 Aligned_cols=248 Identities=24% Similarity=0.358 Sum_probs=194.5
Q ss_pred ceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCc---ccHHHHHHHHHHhhcC-CCCccceeeeeeecCCcccceE
Q 035862 78 LKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL---QGHKQWLAEVQFLGVV-SHPNLVKLLGYCSTEDERGIQR 153 (393)
Q Consensus 78 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~ 153 (393)
+.||+|+||.||+|.+... +..||+|++..... .....+.+|+.++..+ +||||+++++++...+ .+
T Consensus 1 ~~lG~G~~g~V~~~~~~~~-----~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~----~~ 71 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKN-----DQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTS----RL 71 (327)
T ss_pred CeeeeCCCeEEEEEEECCC-----CCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCC----EE
Confidence 3699999999999987543 34699999976421 2334567899998888 5999999999987766 56
Q ss_pred EEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCCccC
Q 035862 154 LLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREG 233 (393)
Q Consensus 154 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~ 233 (393)
++||||+++++|..++. ....+++..++.++.||+.||+|||++ +++||||||+|||++.++.+||+|||++...
T Consensus 72 ~lv~e~~~~~~L~~~~~--~~~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~ 146 (327)
T cd05617 72 FLVIEYVNGGDLMFHMQ--RQRKLPEEHARFYAAEICIALNFLHER---GIIYRDLKLDNVLLDADGHIKLTDYGMCKEG 146 (327)
T ss_pred EEEEeCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEeCCCCEEEeccccceec
Confidence 99999999999998884 335689999999999999999999998 9999999999999999999999999998753
Q ss_pred CCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhh----hHHHHHHhhcCcCCcc
Q 035862 234 PTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTME----QKLLEWVKQFPADGKK 309 (393)
Q Consensus 234 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~----~~~~~~~~~~~~~~~~ 309 (393)
..... .....+||+.|+|||++.+..++.++|||||||++|+|++|..||........ ..........
T Consensus 147 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~------ 218 (327)
T cd05617 147 LGPGD--TTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEK------ 218 (327)
T ss_pred cCCCC--ceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhC------
Confidence 22111 22346799999999999999999999999999999999999999964322111 1111111110
Q ss_pred cccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCC------HHHHHHHHH
Q 035862 310 FSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPT------MNQVVESLK 356 (393)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps------~~~~l~~l~ 356 (393)
....+...+..+.+++.+||+.||.+|++ +.++++|.+
T Consensus 219 ---------~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h~~ 262 (327)
T cd05617 219 ---------PIRIPRFLSVKASHVLKGFLNKDPKERLGCQPQTGFSDIKSHTF 262 (327)
T ss_pred ---------CCCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHHcCCC
Confidence 00112234577899999999999999998 568888864
No 174
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=7.1e-41 Score=301.10 Aligned_cols=250 Identities=30% Similarity=0.457 Sum_probs=197.4
Q ss_pred CCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcccHHHHHHHHHHhhcCCCCccceeeeeeecCCcccce
Q 035862 73 GFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQ 152 (393)
Q Consensus 73 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 152 (393)
+|++.+.||+|+||.||+|.+... ..+++|.+.... .....+.+|+.+++.++||||+++++++...+ .
T Consensus 5 ~~~~~~~lg~G~~~~v~~~~~~~~------~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~----~ 73 (256)
T cd05059 5 ELTFLKELGSGQFGVVHLGKWRGK------IDVAIKMIREGA-MSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQR----P 73 (256)
T ss_pred HcchhhhhccCCCceEEEeEecCC------ccEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEEEEEEEEcCCC----c
Confidence 588889999999999999986422 248999886543 23456788999999999999999999987665 4
Q ss_pred EEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCCcc
Q 035862 153 RLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLARE 232 (393)
Q Consensus 153 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~ 232 (393)
.++||||+++++|.+++.... ..+++..++.++.|++.||+|||+. +++||||||+||++++++.+||+|||+++.
T Consensus 74 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~ 149 (256)
T cd05059 74 IFIVTEYMANGCLLNYLRERK-GKLGTEWLLDMCSDVCEAMEYLESN---GFIHRDLAARNCLVGEDNVVKVSDFGLARY 149 (256)
T ss_pred eEEEEecCCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHhhEEECCCCcEEECCccccee
Confidence 599999999999999986543 3689999999999999999999998 999999999999999999999999999876
Q ss_pred CCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHh-CCCccCCCCchhhhHHHHHHhhcCcCCcccc
Q 035862 233 GPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILT-GRRVLERNRPTMEQKLLEWVKQFPADGKKFS 311 (393)
Q Consensus 233 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (393)
....... ......++..|+|||.+.+..++.++||||||+++|+|++ |..||......... ......
T Consensus 150 ~~~~~~~-~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~---~~~~~~-------- 217 (256)
T cd05059 150 VLDDQYT-SSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVV---ESVSAG-------- 217 (256)
T ss_pred ccccccc-ccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHH---HHHHcC--------
Confidence 4322111 1111223457999999998999999999999999999999 89998765432211 111100
Q ss_pred cccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 035862 312 MMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESL 355 (393)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l 355 (393)
.....+..++.++.+++.+||..+|++|||+.++++.|
T Consensus 218 ------~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 218 ------YRLYRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred ------CcCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence 00111123467899999999999999999999999876
No 175
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=1.6e-40 Score=299.50 Aligned_cols=253 Identities=30% Similarity=0.422 Sum_probs=200.6
Q ss_pred cCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcccHHHHHHHHHHhhcCCCCccceeeeeeecCCcccc
Q 035862 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGI 151 (393)
Q Consensus 72 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 151 (393)
++|.+...||+|++|.||+|.+.... .+++|.+.... .....+.+|+.+++.++|||++++++++.. +
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~------~~~lK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~---- 73 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGTT------KVAIKTLKPGT-MMPEAFLQEAQIMKKLRHDKLVPLYAVVSE-E---- 73 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCCc------eEEEEEcccCC-ccHHHHHHHHHHHHhCCCCCeeeEEEEEcC-C----
Confidence 46889999999999999999864322 38899876543 334567889999999999999999988743 2
Q ss_pred eEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCCc
Q 035862 152 QRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAR 231 (393)
Q Consensus 152 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~ 231 (393)
..+++|||+.+++|.+++.......+++..+..++.|++.||.|||+. |++|+||||+||++++++.++|+|||++.
T Consensus 74 ~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dl~~~Nill~~~~~~~l~dfg~~~ 150 (260)
T cd05069 74 PIYIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERM---NYIHRDLRAANILVGDNLVCKIADFGLAR 150 (260)
T ss_pred CcEEEEEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCeEEECCCccce
Confidence 348999999999999999765555688999999999999999999998 99999999999999999999999999997
Q ss_pred cCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHh-CCCccCCCCchhhhHHHHHHhhcCcCCccc
Q 035862 232 EGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILT-GRRVLERNRPTMEQKLLEWVKQFPADGKKF 310 (393)
Q Consensus 232 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (393)
........ ......++..|+|||...+..++.++||||||+++|+|++ |..||....+... .......
T Consensus 151 ~~~~~~~~-~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~---~~~~~~~------- 219 (260)
T cd05069 151 LIEDNEYT-ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREV---LEQVERG------- 219 (260)
T ss_pred EccCCccc-ccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHH---HHHHHcC-------
Confidence 65332211 1223345678999999988889999999999999999999 8999976433211 1111110
Q ss_pred ccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 035862 311 SMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKL 357 (393)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~ 357 (393)
.....+...+..+.+++.+||.+||++||++.++++.|+.
T Consensus 220 -------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 220 -------YRMPCPQGCPESLHELMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred -------CCCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 0011122356789999999999999999999999998864
No 176
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=9.8e-41 Score=300.13 Aligned_cols=249 Identities=30% Similarity=0.460 Sum_probs=199.3
Q ss_pred cCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcccHHHHHHHHHHhhcCCCCccceeeeeeecCCcccc
Q 035862 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGI 151 (393)
Q Consensus 72 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 151 (393)
++|.+.+.||+|+||.||++.... ..+++|...... ..+.+.+|+.+++.++|+|++++++++...+.
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~~-------~~~~~k~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~--- 73 (256)
T cd05082 6 KELKLLQTIGKGEFGDVMLGDYRG-------NKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKG--- 73 (256)
T ss_pred HhCeeeeeecccCCCeEEEEEEcC-------CcEEEEEeCCCc--hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCC---
Confidence 468999999999999999997542 248999886543 34568899999999999999999997654432
Q ss_pred eEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCCc
Q 035862 152 QRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAR 231 (393)
Q Consensus 152 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~ 231 (393)
..+++|||+.+++|.+++.......+++..++.++.|++.||+|||++ |++||||||+||++++++.+||+|||++.
T Consensus 74 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~~ 150 (256)
T cd05082 74 GLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEAN---NFVHRDLAARNVLVSEDNVAKVSDFGLTK 150 (256)
T ss_pred ceEEEEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeccccchheEEEcCCCcEEecCCccce
Confidence 459999999999999999766555688999999999999999999998 99999999999999999999999999987
Q ss_pred cCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHh-CCCccCCCCchhhhHHHHHHhhcCcCCccc
Q 035862 232 EGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILT-GRRVLERNRPTMEQKLLEWVKQFPADGKKF 310 (393)
Q Consensus 232 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (393)
...... ....++..|+|||++.+..++.++|||||||++|+|++ |+.||....... .......
T Consensus 151 ~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~---~~~~~~~-------- 214 (256)
T cd05082 151 EASSTQ-----DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD---VVPRVEK-------- 214 (256)
T ss_pred eccccC-----CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHH---HHHHHhc--------
Confidence 543221 22344568999999998899999999999999999998 999986543211 1111110
Q ss_pred ccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 035862 311 SMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKL 357 (393)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~ 357 (393)
......+..++..+.+++.+||+.+|++|||+.++++.|..
T Consensus 215 ------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 255 (256)
T cd05082 215 ------GYKMDAPDGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEH 255 (256)
T ss_pred ------CCCCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhc
Confidence 00111122346789999999999999999999999998865
No 177
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=9e-41 Score=306.86 Aligned_cols=268 Identities=29% Similarity=0.471 Sum_probs=206.4
Q ss_pred cCCcccceecccCCceEEEEEEcCCCC-----------CCCceEEEEEEecCCCc-ccHHHHHHHHHHhhcCCCCcccee
Q 035862 72 NGFNRMLKIGEGGFGSVYKGTIRPLDG-----------RGEPLVVAVKKLNNHGL-QGHKQWLAEVQFLGVVSHPNLVKL 139 (393)
Q Consensus 72 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~-----------~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~ 139 (393)
.+|++.+.||+|+||.||+|.+..... ......|++|.+..... .....+.+|+.+++.++||||+++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~ 84 (296)
T cd05051 5 QPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIARL 84 (296)
T ss_pred hhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeEE
Confidence 579999999999999999998764332 22446789999876532 335567889999999999999999
Q ss_pred eeeeecCCcccceEEEEEeecCCCChHHHHhhcC---------CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCC
Q 035862 140 LGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRA---------QPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFK 210 (393)
Q Consensus 140 ~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~---------~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dik 210 (393)
++++...+ ..+++|||+.+++|.+++.... ...+++..++.++.|++.||.|||+. +++|+|||
T Consensus 85 ~~~~~~~~----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~---~i~H~dlk 157 (296)
T cd05051 85 LGVCTVDP----PLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESL---NFVHRDLA 157 (296)
T ss_pred EEEEecCC----CcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHc---Cccccccc
Confidence 99998765 4599999999999999985433 12689999999999999999999998 99999999
Q ss_pred CCCeEeCCCCceEEeeccCCccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHh--CCCccCCC
Q 035862 211 TSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILT--GRRVLERN 288 (393)
Q Consensus 211 p~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ellt--g~~pf~~~ 288 (393)
|+||+++.++.++|+|||++................++..|+|||.+.+..++.++|||||||++|||++ +..||...
T Consensus 158 p~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~ 237 (296)
T cd05051 158 TRNCLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHL 237 (296)
T ss_pred hhceeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCc
Confidence 9999999999999999999876544333333344566788999999988889999999999999999998 66777543
Q ss_pred CchhhhHHHHHHhhcCcCCcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 035862 289 RPTMEQKLLEWVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLK 356 (393)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~ 356 (393)
... .............. .......+..++.++.+++.+||+.||.+|||+.++++.|.
T Consensus 238 ~~~---~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~ 295 (296)
T cd05051 238 TDQ---QVIENAGHFFRDDG-------RQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQ 295 (296)
T ss_pred ChH---HHHHHHHhcccccc-------ccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhc
Confidence 321 11111111100000 00001112234578999999999999999999999998875
No 178
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=2.1e-41 Score=306.44 Aligned_cols=255 Identities=24% Similarity=0.348 Sum_probs=200.1
Q ss_pred cCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcccHHHHHHHHHHhhcCCCCccceeeeeeecCCcccc
Q 035862 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGI 151 (393)
Q Consensus 72 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 151 (393)
++|.+.+.||+|+||.||+|.+..+ +..|++|.+..........+.+|+.+++.++||||+++++.+...+
T Consensus 9 ~~~~~~~~lg~g~~~~v~~~~~~~~-----~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~---- 79 (267)
T cd06645 9 EDFELIQRIGSGTYGDVYKARNVNT-----GELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRD---- 79 (267)
T ss_pred HHHHHHHHhCCCCCeEEEEEEEcCC-----CcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCC----
Confidence 4688889999999999999986533 3469999987654444556778999999999999999999988766
Q ss_pred eEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCCc
Q 035862 152 QRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAR 231 (393)
Q Consensus 152 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~ 231 (393)
..++||||+++++|.+++.. ...+++..++.++.|++.||.|||+. |++|+||||+||+++.++.++|+|||++.
T Consensus 80 ~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~~~~~l~dfg~~~ 154 (267)
T cd06645 80 KLWICMEFCGGGSLQDIYHV--TGPLSESQIAYVSRETLQGLYYLHSK---GKMHRDIKGANILLTDNGHVKLADFGVSA 154 (267)
T ss_pred EEEEEEeccCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECcceeee
Confidence 56999999999999998843 44689999999999999999999998 99999999999999999999999999986
Q ss_pred cCCCCCCccccccccccCCccCccccc---cCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcCCc
Q 035862 232 EGPTGDHTHVSTAVVGTYGYAAPEYIE---TGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGK 308 (393)
Q Consensus 232 ~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 308 (393)
...... .......|+..|+|||++. ...++.++|+|||||++|+|++|..||....+......... .. ..
T Consensus 155 ~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~~~-~~--~~-- 227 (267)
T cd06645 155 QITATI--AKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTK-SN--FQ-- 227 (267)
T ss_pred EccCcc--cccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhhhc-cC--CC--
Confidence 543221 1223457899999999874 45688999999999999999999999865443221111000 00 00
Q ss_pred ccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 035862 309 KFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESL 355 (393)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l 355 (393)
.+.... ...++..+.+++.+||..+|++||++.++++|.
T Consensus 228 ------~~~~~~--~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~~~ 266 (267)
T cd06645 228 ------PPKLKD--KMKWSNSFHHFVKMALTKNPKKRPTAEKLLQHP 266 (267)
T ss_pred ------CCcccc--cCCCCHHHHHHHHHHccCCchhCcCHHHHhcCC
Confidence 000000 012456789999999999999999999999874
No 179
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-43 Score=301.70 Aligned_cols=251 Identities=28% Similarity=0.402 Sum_probs=207.5
Q ss_pred CcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcccHHHHHHHHHHhhcCCCCccceeeeeeecCCcccceE
Q 035862 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQR 153 (393)
Q Consensus 74 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 153 (393)
|.++.+||+|+||.||+|.++. .+.++|+|.+.-. ....++..|+.|++++..|++|++||.+.... -+
T Consensus 35 FDi~~KLGEGSYGSV~KAIH~E-----sG~v~AIK~VPV~--sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~s----DL 103 (502)
T KOG0574|consen 35 FDIVGKLGEGSYGSVHKAIHRE-----SGHVLAIKKVPVD--TDLQEIIKEISIMQQCKSKYVVKYYGSYFKHS----DL 103 (502)
T ss_pred HHHHHHhcCCcchHHHHHHHhc-----cCcEEEEEecCcc--chHHHHHHHHHHHHHcCCchhhhhhhhhccCC----ce
Confidence 6667789999999999998653 4568999998654 44677889999999999999999999876655 35
Q ss_pred EEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCCccC
Q 035862 154 LLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREG 233 (393)
Q Consensus 154 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~ 233 (393)
++|||||..|++.+.++.+ ++++.+..+..+++..++||+|||.. .-+|||||..|||++.+|.+||+|||.+..+
T Consensus 104 WIVMEYCGAGSiSDI~R~R-~K~L~E~EIs~iL~~TLKGL~YLH~~---~KIHRDIKAGNILLNT~G~AKLADFGVAGQL 179 (502)
T KOG0574|consen 104 WIVMEYCGAGSISDIMRAR-RKPLSEQEISAVLRDTLKGLQYLHDL---KKIHRDIKAGNILLNTDGIAKLADFGVAGQL 179 (502)
T ss_pred EeehhhcCCCcHHHHHHHh-cCCccHHHHHHHHHHHHhHHHHHHHH---HHHHhhcccccEEEcccchhhhhhccccchh
Confidence 9999999999999988654 46799999999999999999999998 8899999999999999999999999999875
Q ss_pred CCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcCCcccccc
Q 035862 234 PTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKFSMM 313 (393)
Q Consensus 234 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (393)
.... ...+...|||.|||||++..-.|+.++||||||++..||..|++||.+-.+-... .-+|.
T Consensus 180 TDTM--AKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAI------FMIPT-------- 243 (502)
T KOG0574|consen 180 TDTM--AKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAI------FMIPT-------- 243 (502)
T ss_pred hhhH--HhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCccccccccee------EeccC--------
Confidence 4332 2346679999999999999999999999999999999999999999764331110 00111
Q ss_pred cCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 035862 314 IDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLK 356 (393)
Q Consensus 314 ~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~ 356 (393)
.+...-..+...+.++.+|+++||-+.|++|.|+.++++|..
T Consensus 244 -~PPPTF~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H~F 285 (502)
T KOG0574|consen 244 -KPPPTFKKPEEWSSEFNDFIRSCLIKKPEERKTALRLCEHTF 285 (502)
T ss_pred -CCCCCCCChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhhhh
Confidence 111112234567899999999999999999999999999843
No 180
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=1e-40 Score=300.68 Aligned_cols=254 Identities=29% Similarity=0.442 Sum_probs=202.8
Q ss_pred hcCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcccHHHHHHHHHHhhcCCCCccceeeeeeecCCccc
Q 035862 71 TNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERG 150 (393)
Q Consensus 71 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 150 (393)
.++|++.++||+|+||.||+|.... +..|++|.+.... .....+.+|+.+++.++||||+++++++.. +
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~~~------~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~--- 73 (260)
T cd05067 5 RETLKLVKKLGAGQFGEVWMGYYNG------HTKVAIKSLKQGS-MSPEAFLAEANLMKQLQHPRLVRLYAVVTQ-E--- 73 (260)
T ss_pred hHHceeeeeeccCccceEEeeecCC------CceEEEEEecCCC-CcHHHHHHHHHHHHhcCCcCeeeEEEEEcc-C---
Confidence 4579999999999999999998542 2359999987654 334678899999999999999999988643 2
Q ss_pred ceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCC
Q 035862 151 IQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLA 230 (393)
Q Consensus 151 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a 230 (393)
..+++|||+.+++|.+++.......+++..+..++.|++.||+|||+. +++||||||+||++++++.++|+|||++
T Consensus 74 -~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~ 149 (260)
T cd05067 74 -PIYIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERK---NYIHRDLRAANILVSETLCCKIADFGLA 149 (260)
T ss_pred -CcEEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHHhEEEcCCCCEEEccCcce
Confidence 359999999999999998766666789999999999999999999998 9999999999999999999999999999
Q ss_pred ccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHh-CCCccCCCCchhhhHHHHHHhhcCcCCcc
Q 035862 231 REGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILT-GRRVLERNRPTMEQKLLEWVKQFPADGKK 309 (393)
Q Consensus 231 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 309 (393)
......... ......++..|+|||++.+..++.++||||||+++|+|++ |+.||......... ......
T Consensus 150 ~~~~~~~~~-~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~---~~~~~~------ 219 (260)
T cd05067 150 RLIEDNEYT-AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVI---QNLERG------ 219 (260)
T ss_pred eecCCCCcc-cccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHHHH---HHHHcC------
Confidence 765422211 1223345678999999988889999999999999999999 99999755432111 111110
Q ss_pred cccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 035862 310 FSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKL 357 (393)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~ 357 (393)
.....+...+.++.+++.+||+.+|++||++++++..|+.
T Consensus 220 --------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 220 --------YRMPRPDNCPEELYELMRLCWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred --------CCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence 0001112345789999999999999999999999998864
No 181
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=1.5e-40 Score=299.14 Aligned_cols=251 Identities=25% Similarity=0.441 Sum_probs=196.1
Q ss_pred eecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCc-ccHHHHHHHHHHhhcCCCCccceeeeeeecCCcccceEEEEE
Q 035862 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL-QGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVY 157 (393)
Q Consensus 79 ~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv~ 157 (393)
.||+|+||.||+|.+... ..+..||+|.+..... .....+.+|+.+++.++||||+++++++... ..++||
T Consensus 2 ~ig~G~~g~v~~~~~~~~---~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~-----~~~lv~ 73 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMR---KKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCEAE-----ALMLVM 73 (257)
T ss_pred ccCCCCcccEEEEEEecC---CCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcCC-----CeEEEE
Confidence 389999999999986522 2344689998876532 2345688999999999999999999987533 358999
Q ss_pred eecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCCccCCCCC
Q 035862 158 EYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGD 237 (393)
Q Consensus 158 e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~ 237 (393)
||+.+++|.+++... ...+++..++.++.|++.||.|||++ |++||||||+||+++.++.+||+|||++.......
T Consensus 74 e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~ 149 (257)
T cd05115 74 EMASGGPLNKFLSGK-KDEITVSNVVELMHQVSMGMKYLEGK---NFVHRDLAARNVLLVNQHYAKISDFGLSKALGADD 149 (257)
T ss_pred EeCCCCCHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhc---CeeecccchheEEEcCCCcEEeccCCccccccCCc
Confidence 999999999988543 34689999999999999999999998 99999999999999999999999999997543332
Q ss_pred Ccc-ccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHh-CCCccCCCCchhhhHHHHHHhhcCcCCcccccccC
Q 035862 238 HTH-VSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILT-GRRVLERNRPTMEQKLLEWVKQFPADGKKFSMMID 315 (393)
Q Consensus 238 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (393)
... ......++..|+|||.+.+..++.++|||||||++|++++ |..||......... .....
T Consensus 150 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~---~~~~~------------- 213 (257)
T cd05115 150 SYYKARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVM---SFIEQ------------- 213 (257)
T ss_pred cceeccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHH---HHHHC-------------
Confidence 211 1122234578999999988889999999999999999996 99999765432211 11111
Q ss_pred cccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q 035862 316 PRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLA 358 (393)
Q Consensus 316 ~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~ 358 (393)
......+..++.++.+++.+||..+|++||++.++++.|...
T Consensus 214 -~~~~~~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 214 -GKRLDCPAECPPEMYALMKDCWIYKWEDRPNFAKVEERMRTY 255 (257)
T ss_pred -CCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence 011112223568899999999999999999999999998764
No 182
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=9.5e-41 Score=300.26 Aligned_cols=254 Identities=24% Similarity=0.359 Sum_probs=203.4
Q ss_pred CCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCC--cccHHHHHHHHHHhhcCCCCccceeeeeeecCCccc
Q 035862 73 GFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG--LQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERG 150 (393)
Q Consensus 73 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 150 (393)
+|++.+.||.|++|.||++.+...+ ..+++|.+.... ......+.+|+.+++.++|+|++++++.+...+.
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~-----~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~-- 73 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDG-----KQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDG-- 73 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCC-----cEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCC--
Confidence 5889999999999999999865433 359999886432 2334567889999999999999999987754332
Q ss_pred ceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCC
Q 035862 151 IQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLA 230 (393)
Q Consensus 151 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a 230 (393)
.++++|||+.+++|.+++.......+++.+++.++.|++.|+.+||+. +++||||||+||+++.++.++|+|||++
T Consensus 74 -~~~lv~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~---~i~H~di~p~nil~~~~~~~~l~df~~~ 149 (257)
T cd08223 74 -LLYIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEK---HILHRDLKTQNVFLTRTNIIKVGDLGIA 149 (257)
T ss_pred -EEEEEecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCchhEEEecCCcEEEecccce
Confidence 568999999999999999765556689999999999999999999998 9999999999999999999999999998
Q ss_pred ccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcCCccc
Q 035862 231 REGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKF 310 (393)
Q Consensus 231 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (393)
........ ......+++.|+|||++.+..++.++||||||+++|+|++|..||........ ........
T Consensus 150 ~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~--~~~~~~~~------- 218 (257)
T cd08223 150 RVLENQCD--MASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSL--VYRIIEGK------- 218 (257)
T ss_pred EEecccCC--ccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHH--HHHHHhcC-------
Confidence 76533221 22345688999999999999999999999999999999999999975432211 11111100
Q ss_pred ccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 035862 311 SMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLK 356 (393)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~ 356 (393)
....+...+..+.+++.+||+.+|++||++.+++++.|
T Consensus 219 --------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~ 256 (257)
T cd08223 219 --------LPPMPKDYSPELGELIATMLSKRPEKRPSVKSILRQPY 256 (257)
T ss_pred --------CCCCccccCHHHHHHHHHHhccCcccCCCHHHHhcCCC
Confidence 01122345678999999999999999999999998754
No 183
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=6.5e-41 Score=337.95 Aligned_cols=262 Identities=23% Similarity=0.355 Sum_probs=202.6
Q ss_pred HhcCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCC--cccHHHHHHHHHHhhcCCCCccceeeeeeecCC
Q 035862 70 ATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG--LQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTED 147 (393)
Q Consensus 70 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 147 (393)
..++|.+++.||.|+||+||+|.+... ...+++|.+.... ......+..|+.+++.++||||++++++|....
T Consensus 11 ~l~~YeIl~kLG~GgFGtVYLAkdk~t-----g~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~ 85 (1021)
T PTZ00266 11 RLNEYEVIKKIGNGRFGEVFLVKHKRT-----QEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKA 85 (1021)
T ss_pred ccCCEEEEEEEecCCCeEEEEEEECCC-----CeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecC
Confidence 457899999999999999999997543 3468999886542 223456788999999999999999999887654
Q ss_pred cccceEEEEEeecCCCChHHHHhhc--CCCCCCHHHHHHHHHHHHHHHHHhhcCC----CCCeEeccCCCCCeEeCC---
Q 035862 148 ERGIQRLLVYEYMPNRSLEDRLFSR--AQPTLPWKTRLEIILGAAEGLAYLHEGL----EIQVIYRDFKTSNVLLDG--- 218 (393)
Q Consensus 148 ~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~i~~ql~~~l~~LH~~~----~~~ivH~Dikp~NIll~~--- 218 (393)
.. .+|+||||+.+++|.++|... ....+++..++.|+.||+.||.|||+.. ..+||||||||+||||+.
T Consensus 86 ~~--~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~ 163 (1021)
T PTZ00266 86 NQ--KLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIR 163 (1021)
T ss_pred CC--EEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCcc
Confidence 33 569999999999999998542 2356899999999999999999999841 025999999999999964
Q ss_pred --------------CCceEEeeccCCccCCCCCCccccccccccCCccCcccccc--CCCCchhhHHHHHHHHHHHHhCC
Q 035862 219 --------------NFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIET--GHLKSQSDIWSFGVVLYEILTGR 282 (393)
Q Consensus 219 --------------~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwslGvil~elltg~ 282 (393)
.+.+||+|||++....... ......||+.|+|||++.+ ..++.++||||||||+|+|++|.
T Consensus 164 ~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s---~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk 240 (1021)
T PTZ00266 164 HIGKITAQANNLNGRPIAKIGDFGLSKNIGIES---MAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGK 240 (1021)
T ss_pred ccccccccccccCCCCceEEccCCccccccccc---cccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCC
Confidence 2358999999997643322 2234579999999999854 45889999999999999999999
Q ss_pred CccCCCCchhhhHHHHHHhhcCcCCcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q 035862 283 RVLERNRPTMEQKLLEWVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLA 358 (393)
Q Consensus 283 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~ 358 (393)
.||....... . +...+...+. + .....+.++.+||..||..+|.+||++.+++.+.+..
T Consensus 241 ~PF~~~~~~~-q-li~~lk~~p~------------l---pi~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h~~ik 299 (1021)
T PTZ00266 241 TPFHKANNFS-Q-LISELKRGPD------------L---PIKGKSKELNILIKNLLNLSAKERPSALQCLGYQIIK 299 (1021)
T ss_pred CCCCcCCcHH-H-HHHHHhcCCC------------C---CcCCCCHHHHHHHHHHhcCChhHCcCHHHHhccHHHh
Confidence 9997543321 1 1111111110 0 0012357799999999999999999999999886654
No 184
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=1.5e-40 Score=301.67 Aligned_cols=263 Identities=26% Similarity=0.441 Sum_probs=203.6
Q ss_pred CcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCc--ccHHHHHHHHHHhhcCCCCccceeeeeeecCCc--c
Q 035862 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL--QGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDE--R 149 (393)
Q Consensus 74 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~--~ 149 (393)
|.+.+.||+|+||.||+|...... .....||+|.+..... .....+.+|+..++.++||||+++++++..... .
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~--~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 78 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDD--GSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQK 78 (273)
T ss_pred CccccccCcCCCceEEEEEEecCC--CCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCcccc
Confidence 567789999999999999875322 2345699998875422 234567899999999999999999998866543 1
Q ss_pred cceEEEEEeecCCCChHHHHhhc----CCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEe
Q 035862 150 GIQRLLVYEYMPNRSLEDRLFSR----AQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLS 225 (393)
Q Consensus 150 ~~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~ 225 (393)
....+++|||+.+++|..++... ....+++..++.++.|++.||.|||+. +++||||||+||++++++.+||+
T Consensus 79 ~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~ 155 (273)
T cd05035 79 IPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNR---NFIHRDLAARNCMLREDMTVCVA 155 (273)
T ss_pred CcccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchheEEECCCCeEEEC
Confidence 12458999999999999988542 234689999999999999999999998 99999999999999999999999
Q ss_pred eccCCccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHh-CCCccCCCCchhhhHHHHHHhhcC
Q 035862 226 DFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILT-GRRVLERNRPTMEQKLLEWVKQFP 304 (393)
Q Consensus 226 Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~ 304 (393)
|||+++...............++..|+|||.+.+..++.++|||||||++|||++ |..||....... ........
T Consensus 156 dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~---~~~~~~~~- 231 (273)
T cd05035 156 DFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHE---IYDYLRHG- 231 (273)
T ss_pred CccceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHH---HHHHHHcC-
Confidence 9999986543332222222345678999999988899999999999999999999 888886543321 11111110
Q ss_pred cCCcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q 035862 305 ADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLA 358 (393)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~ 358 (393)
. ....+..++..+.+++.+||+.||++||++.+++++|..+
T Consensus 232 ---~----------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 232 ---N----------RLKQPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred ---C----------CCCCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 0 0011223467899999999999999999999999999865
No 185
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=1e-40 Score=305.36 Aligned_cols=262 Identities=29% Similarity=0.456 Sum_probs=203.7
Q ss_pred hcCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCc-ccHHHHHHHHHHhhcCCCCccceeeeeeecCCcc
Q 035862 71 TNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL-QGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDER 149 (393)
Q Consensus 71 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 149 (393)
.++|++.+.||+|+||.||+|.+...........|++|.+..... .....+.+|+.+++.++||||+++++++...+
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~-- 81 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGK-- 81 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCC--
Confidence 467999999999999999999865322233456799999875432 23456888999999999999999999988766
Q ss_pred cceEEEEEeecCCCChHHHHhhcC--------------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccC
Q 035862 150 GIQRLLVYEYMPNRSLEDRLFSRA--------------------QPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDF 209 (393)
Q Consensus 150 ~~~~~lv~e~~~~~~L~~~l~~~~--------------------~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Di 209 (393)
..++||||+.+++|.+++.... ...+++..++.++.|++.||.|||++ +++||||
T Consensus 82 --~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~---~i~H~dl 156 (288)
T cd05050 82 --PMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSER---KFVHRDL 156 (288)
T ss_pred --ccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---Ceecccc
Confidence 4599999999999999996422 13477888999999999999999998 9999999
Q ss_pred CCCCeEeCCCCceEEeeccCCccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHh-CCCccCCC
Q 035862 210 KTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILT-GRRVLERN 288 (393)
Q Consensus 210 kp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ellt-g~~pf~~~ 288 (393)
||+||++++++.++|+|||++................++..|+|||.+.+..++.++|||||||++|+|++ |..||...
T Consensus 157 ~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~ 236 (288)
T cd05050 157 ATRNCLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGM 236 (288)
T ss_pred cHhheEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Confidence 99999999999999999999875433322222223345667999999998899999999999999999998 88888654
Q ss_pred CchhhhHHHHHHhhcCcCCcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 035862 289 RPTMEQKLLEWVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLK 356 (393)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~ 356 (393)
.... ....... +.. ...+..++.++.+|+.+||+.||.+|||+.++++.|+
T Consensus 237 ~~~~---~~~~~~~----~~~----------~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~ 287 (288)
T cd05050 237 AHEE---VIYYVRD----GNV----------LSCPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQ 287 (288)
T ss_pred CHHH---HHHHHhc----CCC----------CCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhh
Confidence 3321 1111111 000 0011234578999999999999999999999999875
No 186
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=3.5e-41 Score=314.37 Aligned_cols=259 Identities=22% Similarity=0.284 Sum_probs=198.7
Q ss_pred cCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCC---cccHHHHHHHHHHhhcCCCCccceeeeeeecCCc
Q 035862 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG---LQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDE 148 (393)
Q Consensus 72 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 148 (393)
++|++.+.||+|+||.||++....++ ..||+|++.+.. ......+.+|+.++..++|+||+++++++...+
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~-----~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~- 74 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTG-----QVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDEN- 74 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCC-----CEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCC-
Confidence 47999999999999999999875443 469999986421 123345778999999999999999999998776
Q ss_pred ccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeecc
Q 035862 149 RGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFG 228 (393)
Q Consensus 149 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg 228 (393)
+.++||||+.+++|.+++... ...+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||
T Consensus 75 ---~~~lv~e~~~g~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg 147 (331)
T cd05597 75 ---NLYLVMDYYVGGDLLTLLSKF-EDRLPEDMARFYLAEMVLAIDSVHQL---GYVHRDIKPDNVLLDKNGHIRLADFG 147 (331)
T ss_pred ---eEEEEEecCCCCcHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEECCCCHHHEEECCCCCEEEEECC
Confidence 569999999999999998542 34689999999999999999999998 99999999999999999999999999
Q ss_pred CCccCCCCCCccccccccccCCccCcccccc-----CCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhc
Q 035862 229 LAREGPTGDHTHVSTAVVGTYGYAAPEYIET-----GHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQF 303 (393)
Q Consensus 229 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~ 303 (393)
++......... ......||+.|+|||++.. ..++.++|||||||++|+|++|+.||.......... .....
T Consensus 148 ~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~--~i~~~- 223 (331)
T cd05597 148 SCLRLLADGTV-QSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYG--KIMNH- 223 (331)
T ss_pred ceeecCCCCCc-cccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHH--HHHcC-
Confidence 98754332211 1223469999999999863 457889999999999999999999997654321111 11100
Q ss_pred CcCCcccccccCcccccccCHHHHHHHHHHHHHhcccCCCC--CCCHHHHHHHHHH
Q 035862 304 PADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEE--RPTMNQVVESLKL 357 (393)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~--Rps~~~~l~~l~~ 357 (393)
..... +.. ....++.++.+|+.+||+.+++. |+++.++++|.|.
T Consensus 224 ---~~~~~--~~~-----~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~hp~~ 269 (331)
T cd05597 224 ---KEHFQ--FPP-----DVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDHPFF 269 (331)
T ss_pred ---CCccc--CCC-----ccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCCCC
Confidence 00000 000 01125678899999988764443 7899999999764
No 187
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=1.2e-41 Score=316.32 Aligned_cols=245 Identities=26% Similarity=0.353 Sum_probs=189.9
Q ss_pred ceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCc---ccHHHHHHHH-HHhhcCCCCccceeeeeeecCCcccceE
Q 035862 78 LKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL---QGHKQWLAEV-QFLGVVSHPNLVKLLGYCSTEDERGIQR 153 (393)
Q Consensus 78 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~-~~l~~l~h~niv~~~~~~~~~~~~~~~~ 153 (393)
+.||+|+||.||+|++..+ +..||+|.+.+... .....+.+|. .+++.++||||+++++++...+ ..
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~-----~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~----~~ 71 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSD-----GSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAE----KL 71 (321)
T ss_pred CeeeeCCCEEEEEEEECCC-----CCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCC----EE
Confidence 3699999999999997543 34699999865321 1223344454 4678899999999999987766 56
Q ss_pred EEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCCccC
Q 035862 154 LLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREG 233 (393)
Q Consensus 154 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~ 233 (393)
++||||+++++|..++.. ...+++..+..++.||+.||.|||+. +|+||||||+||+++.+|.+||+|||++...
T Consensus 72 ~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~ 146 (321)
T cd05603 72 YFVLDYVNGGELFFHLQR--ERCFLEPRARFYAAEVASAIGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKEG 146 (321)
T ss_pred EEEEcCCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEccCCCCccC
Confidence 999999999999988843 45688899999999999999999998 9999999999999999999999999998753
Q ss_pred CCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcCCcccccc
Q 035862 234 PTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKFSMM 313 (393)
Q Consensus 234 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (393)
..... ......|++.|+|||++.+..++.++|||||||++|||++|..||....... ........+
T Consensus 147 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~---~~~~i~~~~--------- 212 (321)
T cd05603 147 VEPEE--TTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQ---MYDNILHKP--------- 212 (321)
T ss_pred CCCCC--ccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHHH---HHHHHhcCC---------
Confidence 22221 2344578999999999998899999999999999999999999997654221 111111100
Q ss_pred cCcccccccCHHHHHHHHHHHHHhcccCCCCCCCH----HHHHHHHH
Q 035862 314 IDPRLRNQYSINAARRVAKLADNCLKKNPEERPTM----NQVVESLK 356 (393)
Q Consensus 314 ~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~----~~~l~~l~ 356 (393)
...+...+..+.+++.+||+.||.+||++ .++++|.+
T Consensus 213 ------~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~~~ 253 (321)
T cd05603 213 ------LQLPGGKTVAACDLLVGLLHKDQRRRLGAKADFLEIKNHVF 253 (321)
T ss_pred ------CCCCCCCCHHHHHHHHHHccCCHhhcCCCCCCHHHHhCCCC
Confidence 01112235678999999999999999875 47766654
No 188
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=9.9e-41 Score=306.54 Aligned_cols=258 Identities=24% Similarity=0.364 Sum_probs=208.6
Q ss_pred cCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcccHHHHHHHHHHhhcCCCCccceeeeeeecCCcccc
Q 035862 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGI 151 (393)
Q Consensus 72 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 151 (393)
.+|++.+.||.|++|.||+|.+... +..|++|.+..........+.+|+.+++.++||||+++++++...+
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~-----~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~---- 89 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVAT-----GQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGD---- 89 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCC-----CcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCc----
Confidence 4699999999999999999986433 3469999887655555667889999999999999999999998766
Q ss_pred eEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCCc
Q 035862 152 QRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAR 231 (393)
Q Consensus 152 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~ 231 (393)
..++|+||+.+++|.+++.. ..+++..+..++.|++.||+|||+. |++||||||+||+++.++.+||+|||++.
T Consensus 90 ~~~lv~e~~~~~~L~~~~~~---~~l~~~~~~~i~~~l~~al~~LH~~---~i~H~dL~p~Nili~~~~~~kl~dfg~~~ 163 (296)
T cd06655 90 ELFVVMEYLAGGSLTDVVTE---TCMDEAQIAAVCRECLQALEFLHAN---QVIHRDIKSDNVLLGMDGSVKLTDFGFCA 163 (296)
T ss_pred eEEEEEEecCCCcHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccCccch
Confidence 56999999999999998843 3589999999999999999999998 99999999999999999999999999987
Q ss_pred cCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcCCcccc
Q 035862 232 EGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKFS 311 (393)
Q Consensus 232 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (393)
....... ......++..|+|||.+.+..++.++|||||||++|+|++|..||....+....... .... .
T Consensus 164 ~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~--~~~~-~------ 232 (296)
T cd06655 164 QITPEQS--KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLI--ATNG-T------ 232 (296)
T ss_pred hcccccc--cCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH--HhcC-C------
Confidence 6433221 123456888999999999888999999999999999999999999766543222111 1000 0
Q ss_pred cccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhh
Q 035862 312 MMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQE 361 (393)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~~~~ 361 (393)
.....+..++..+.+||.+||..||.+||++.+++++.|.....
T Consensus 233 ------~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~~~~~~~~~ 276 (296)
T cd06655 233 ------PELQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQHPFLKLAK 276 (296)
T ss_pred ------cccCCcccCCHHHHHHHHHHhhcChhhCCCHHHHhhChHhhhcc
Confidence 00011223457789999999999999999999999999886543
No 189
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=5.1e-41 Score=305.91 Aligned_cols=257 Identities=24% Similarity=0.358 Sum_probs=200.1
Q ss_pred cCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCC-cccHHHHHHHHHHhhcCCCCccceeeeeeecCCccc
Q 035862 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG-LQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERG 150 (393)
Q Consensus 72 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 150 (393)
++|++.+.||+|+||.||+|.+..+ +..||+|.+.... ......+.+|+.+++.++||||+++++.+...+
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~-----~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--- 72 (279)
T cd06619 1 QDIQYQEILGHGNGGTVYKAYHLLT-----RRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVEN--- 72 (279)
T ss_pred CcchheeeeccCCCeEEEEEEEcCC-----CcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECC---
Confidence 3688889999999999999986533 3469999886542 233456788999999999999999999998776
Q ss_pred ceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCC
Q 035862 151 IQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLA 230 (393)
Q Consensus 151 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a 230 (393)
..++||||+++++|..+. .+++..+..++.|++.||.|||+. |++|+||||+||+++.++.++|+|||++
T Consensus 73 -~~~lv~e~~~~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nill~~~~~~~l~dfg~~ 142 (279)
T cd06619 73 -RISICTEFMDGGSLDVYR------KIPEHVLGRIAVAVVKGLTYLWSL---KILHRDVKPSNMLVNTRGQVKLCDFGVS 142 (279)
T ss_pred -EEEEEEecCCCCChHHhh------cCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCCHHHEEECCCCCEEEeeCCcc
Confidence 458999999999997542 468888999999999999999998 9999999999999999999999999998
Q ss_pred ccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhH-HHHHHhhcCcCCcc
Q 035862 231 REGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQK-LLEWVKQFPADGKK 309 (393)
Q Consensus 231 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~-~~~~~~~~~~~~~~ 309 (393)
...... ......|+..|+|||++.+..++.++|+||||+++|+|++|..||.......... ........
T Consensus 143 ~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~------ 212 (279)
T cd06619 143 TQLVNS----IAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCI------ 212 (279)
T ss_pred eecccc----cccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHH------
Confidence 754322 1234578999999999999899999999999999999999999996532211100 00000000
Q ss_pred cccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHh
Q 035862 310 FSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQ 360 (393)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~~~ 360 (393)
.+...........+.++.+++.+||+.+|++||++++++++.|....
T Consensus 213 ----~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~~~~~~~ 259 (279)
T cd06619 213 ----VDEDPPVLPVGQFSEKFVHFITQCMRKQPKERPAPENLMDHPFIVQY 259 (279)
T ss_pred ----hccCCCCCCCCcCCHHHHHHHHHHhhCChhhCCCHHHHhcCcccccc
Confidence 00000000011245678999999999999999999999999887543
No 190
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=2.1e-40 Score=301.94 Aligned_cols=266 Identities=26% Similarity=0.385 Sum_probs=208.7
Q ss_pred hcCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCC-cccHHHHHHHHHHhhcCCCCccceeeeeeecCCcc
Q 035862 71 TNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG-LQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDER 149 (393)
Q Consensus 71 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 149 (393)
.++|.+.+.||+|+||.||+|.+.... ......|++|.+.... ......+.+|+.+++.++||||+++++++...+.
T Consensus 5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~-~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~- 82 (280)
T cd05043 5 RDRVTLSDLLQEGTFGRIFYGILIDEK-PGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGE- 82 (280)
T ss_pred hhheEEeeeecccCCceEEEEEEecCC-CCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCC-
Confidence 467999999999999999999976422 2335678999886542 2334567889999999999999999998876432
Q ss_pred cceEEEEEeecCCCChHHHHhhcCC------CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceE
Q 035862 150 GIQRLLVYEYMPNRSLEDRLFSRAQ------PTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPK 223 (393)
Q Consensus 150 ~~~~~lv~e~~~~~~L~~~l~~~~~------~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~k 223 (393)
..+++++|+.+++|.+++..... ..+++..++.++.|++.||.|||+. +++|+||||+||++++++.+|
T Consensus 83 --~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~i~H~di~p~nil~~~~~~~k 157 (280)
T cd05043 83 --PPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKR---GVIHKDIAARNCVIDEELQVK 157 (280)
T ss_pred --CCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCHhhEEEcCCCcEE
Confidence 45899999999999999865322 4588999999999999999999998 999999999999999999999
Q ss_pred EeeccCCccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHh-CCCccCCCCchhhhHHHHHHhh
Q 035862 224 LSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILT-GRRVLERNRPTMEQKLLEWVKQ 302 (393)
Q Consensus 224 l~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~ 302 (393)
|+|||+++...............++..|+|||++.+..++.++|||||||++|++++ |..||....+.. .......
T Consensus 158 l~d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~---~~~~~~~ 234 (280)
T cd05043 158 ITDNALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFE---MAAYLKD 234 (280)
T ss_pred ECCCCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHH---HHHHHHc
Confidence 999999976543332222223455678999999988889999999999999999999 999997654322 1111111
Q ss_pred cCcCCcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHh
Q 035862 303 FPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQ 360 (393)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~~~ 360 (393)
+. .......++.++.+++.+||..||++|||+.++++.|..+.+
T Consensus 235 ----~~----------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~ 278 (280)
T cd05043 235 ----GY----------RLAQPINCPDELFAVMACCWALDPEERPSFSQLVQCLTDFHA 278 (280)
T ss_pred ----CC----------CCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 00 001112345788999999999999999999999999988765
No 191
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=6.9e-42 Score=317.49 Aligned_cols=248 Identities=27% Similarity=0.360 Sum_probs=196.9
Q ss_pred ceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCc--ccHHHHHHHHHHhhcCCCCccceeeeeeecCCcccceEEE
Q 035862 78 LKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL--QGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLL 155 (393)
Q Consensus 78 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~l 155 (393)
+.||+|+||.||+++... ....+..||+|++..... .....+.+|+++++.++||||+++++++...+ ..|+
T Consensus 2 ~~lg~G~~g~Vy~~~~~~--~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~----~~~l 75 (318)
T cd05582 2 KVLGQGSFGKVFLVRKIT--GPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEG----KLYL 75 (318)
T ss_pred ceeeeCCCEEEEEEEEec--cCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCC----EEEE
Confidence 579999999999987532 123456799999875422 22345678999999999999999999998766 5699
Q ss_pred EEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCCccCCC
Q 035862 156 VYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPT 235 (393)
Q Consensus 156 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~ 235 (393)
||||+.+++|.+++.. ...+++..++.++.||+.||.|||+. +|+||||||+|||++.++.+||+|||++.....
T Consensus 76 v~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~ 150 (318)
T cd05582 76 ILDFLRGGDLFTRLSK--EVMFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKESID 150 (318)
T ss_pred EEcCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHeEECCCCcEEEeeccCCcccCC
Confidence 9999999999998843 45689999999999999999999998 999999999999999999999999999876433
Q ss_pred CCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcCCcccccccC
Q 035862 236 GDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKFSMMID 315 (393)
Q Consensus 236 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (393)
... ......|++.|+|||.+.+..++.++|||||||++|+|++|+.||......... ...... .
T Consensus 151 ~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~--~~i~~~----~-------- 214 (318)
T cd05582 151 HEK--KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETM--TMILKA----K-------- 214 (318)
T ss_pred CCC--ceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHHHH--HHHHcC----C--------
Confidence 211 223457899999999999888999999999999999999999999765432111 111100 0
Q ss_pred cccccccCHHHHHHHHHHHHHhcccCCCCCCC-----HHHHHHHHH
Q 035862 316 PRLRNQYSINAARRVAKLADNCLKKNPEERPT-----MNQVVESLK 356 (393)
Q Consensus 316 ~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps-----~~~~l~~l~ 356 (393)
...+..++.++.+|+.+||+.||++||+ +.+++.|.|
T Consensus 215 ----~~~p~~~~~~~~~li~~~l~~~P~~R~~a~~~~~~~~~~~~~ 256 (318)
T cd05582 215 ----LGMPQFLSPEAQSLLRALFKRNPANRLGAGPDGVEEIKRHPF 256 (318)
T ss_pred ----CCCCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhCCCC
Confidence 0112234578899999999999999999 677887754
No 192
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=1.2e-40 Score=305.44 Aligned_cols=256 Identities=26% Similarity=0.401 Sum_probs=203.0
Q ss_pred cCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcccHHHHHHHHHHhhcCCCCccceeeeeeecCCcccc
Q 035862 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGI 151 (393)
Q Consensus 72 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 151 (393)
+.|++++.||.|+||.||+|.+..++ ..+++|.+..........+.+|+.+++.++||||+++++.+..+.
T Consensus 12 ~~y~i~~~lg~g~~g~vy~~~~~~~~-----~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~---- 82 (292)
T cd06644 12 EVWEIIGELGDGAFGKVYKAKNKETG-----ALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDG---- 82 (292)
T ss_pred hhhhhhheecCCCCeEEEEEEECCCC-----ceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCC----
Confidence 56999999999999999999865433 469999987765555677888999999999999999999987765
Q ss_pred eEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCCc
Q 035862 152 QRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAR 231 (393)
Q Consensus 152 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~ 231 (393)
..++||||+++++|..++.... ..+++..++.++.|++.||.|||+. +++||||||+||+++.++.++|+|||++.
T Consensus 83 ~~~lv~e~~~~~~l~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~ 158 (292)
T cd06644 83 KLWIMIEFCPGGAVDAIMLELD-RGLTEPQIQVICRQMLEALQYLHSM---KIIHRDLKAGNVLLTLDGDIKLADFGVSA 158 (292)
T ss_pred eEEEEEecCCCCcHHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHhcC---CeeecCCCcceEEEcCCCCEEEccCccce
Confidence 5699999999999988775433 4589999999999999999999998 99999999999999999999999999886
Q ss_pred cCCCCCCccccccccccCCccCccccc-----cCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcC
Q 035862 232 EGPTGDHTHVSTAVVGTYGYAAPEYIE-----TGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPAD 306 (393)
Q Consensus 232 ~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~ 306 (393)
..... ........++..|+|||++. ...++.++|||||||++|+|++|..||....... .........+
T Consensus 159 ~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~--~~~~~~~~~~-- 232 (292)
T cd06644 159 KNVKT--LQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMR--VLLKIAKSEP-- 232 (292)
T ss_pred ecccc--ccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHH--HHHHHhcCCC--
Confidence 53222 11223456888999999884 3457889999999999999999999997654321 1111111000
Q ss_pred CcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 035862 307 GKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKL 357 (393)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~ 357 (393)
+ ....+..++.++.+++.+||..+|++||++.+++++.+.
T Consensus 233 ---------~--~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~ 272 (292)
T cd06644 233 ---------P--TLSQPSKWSMEFRDFLKTALDKHPETRPSAAQLLEHPFV 272 (292)
T ss_pred ---------c--cCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHhcCccc
Confidence 0 001112345678999999999999999999999998763
No 193
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.7e-40 Score=310.35 Aligned_cols=267 Identities=28% Similarity=0.432 Sum_probs=207.1
Q ss_pred cCCcccceecccCCceEEEEEEcCCCC--CCCceEEEEEEecCCC-cccHHHHHHHHHHhhcC-CCCccceeeeeeecCC
Q 035862 72 NGFNRMLKIGEGGFGSVYKGTIRPLDG--RGEPLVVAVKKLNNHG-LQGHKQWLAEVQFLGVV-SHPNLVKLLGYCSTED 147 (393)
Q Consensus 72 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~--~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~ 147 (393)
.+|++.+.||+|+||.||+|.+...+. ......|++|.+.... ......+.+|+.+++++ +||||+++++++...+
T Consensus 12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 91 (334)
T cd05100 12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG 91 (334)
T ss_pred hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCC
Confidence 468999999999999999998653322 2234568999887542 23346788999999999 7999999999998765
Q ss_pred cccceEEEEEeecCCCChHHHHhhcC--------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCC
Q 035862 148 ERGIQRLLVYEYMPNRSLEDRLFSRA--------------QPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSN 213 (393)
Q Consensus 148 ~~~~~~~lv~e~~~~~~L~~~l~~~~--------------~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~N 213 (393)
..+++|||+.+++|.+++.... ...+++..+..++.|++.||.|||++ |++||||||+|
T Consensus 92 ----~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---givH~dlkp~N 164 (334)
T cd05100 92 ----PLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQ---KCIHRDLAARN 164 (334)
T ss_pred ----ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---Ceeccccccce
Confidence 4599999999999999986432 23477888899999999999999998 99999999999
Q ss_pred eEeCCCCceEEeeccCCccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHh-CCCccCCCCchh
Q 035862 214 VLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILT-GRRVLERNRPTM 292 (393)
Q Consensus 214 Ill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ellt-g~~pf~~~~~~~ 292 (393)
||++.++.+||+|||+++...............++..|+|||++.+..++.++||||||+++|||++ |..||.......
T Consensus 165 ill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~ 244 (334)
T cd05100 165 VLVTEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEE 244 (334)
T ss_pred EEEcCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCHHH
Confidence 9999999999999999976543322222222344567999999999999999999999999999998 888886543222
Q ss_pred hhHHHHHHhhcCcCCcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhh
Q 035862 293 EQKLLEWVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQES 362 (393)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~~~~~ 362 (393)
. ....... .....+..++.++.+++.+||+.+|++||++.++++.|..+....
T Consensus 245 ~---~~~~~~~--------------~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~~~ 297 (334)
T cd05100 245 L---FKLLKEG--------------HRMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLTVT 297 (334)
T ss_pred H---HHHHHcC--------------CCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHhhhc
Confidence 1 1111110 000111234567899999999999999999999999999888544
No 194
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=1.2e-40 Score=334.77 Aligned_cols=264 Identities=24% Similarity=0.325 Sum_probs=203.2
Q ss_pred cCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCc---ccHHHHHHHHHHhhcCCCCccceeeeeeecCCc
Q 035862 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL---QGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDE 148 (393)
Q Consensus 72 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 148 (393)
++|++.++||+|+||.||+|.+..++ ..||+|++..... ....++.+|+++++.++||||+++++++...+
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg-----~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~- 75 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCS-----RRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGD- 75 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCC-----cEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCC-
Confidence 57999999999999999999975443 4599999875422 23456889999999999999999999988766
Q ss_pred ccceEEEEEeecCCCChHHHHhhcC---------CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCC
Q 035862 149 RGIQRLLVYEYMPNRSLEDRLFSRA---------QPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGN 219 (393)
Q Consensus 149 ~~~~~~lv~e~~~~~~L~~~l~~~~---------~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~ 219 (393)
..++||||++|++|.+++.... ...+++..++.++.||+.||+|||++ ||+||||||+|||++.+
T Consensus 76 ---~lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~---GIIHRDLKPeNILLd~d 149 (932)
T PRK13184 76 ---PVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSK---GVLHRDLKPDNILLGLF 149 (932)
T ss_pred ---EEEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHC---CccccCCchheEEEcCC
Confidence 5699999999999999885321 12355677889999999999999998 99999999999999999
Q ss_pred CceEEeeccCCccCCCCCC----------------ccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCC
Q 035862 220 FKPKLSDFGLAREGPTGDH----------------THVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRR 283 (393)
Q Consensus 220 ~~~kl~Dfg~a~~~~~~~~----------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~ 283 (393)
|.++|+|||++........ .......+||+.|+|||++.+..++.++|||||||++|||+||..
T Consensus 150 g~vKLiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~ 229 (932)
T PRK13184 150 GEVVILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSF 229 (932)
T ss_pred CCEEEEecCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCC
Confidence 9999999999976521110 001123579999999999999999999999999999999999999
Q ss_pred ccCCCCchhhhHHHHHHhhcCcCCcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCC-CHHHHHHHHHHHHhhh
Q 035862 284 VLERNRPTMEQKLLEWVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERP-TMNQVVESLKLAVQES 362 (393)
Q Consensus 284 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rp-s~~~~l~~l~~~~~~~ 362 (393)
||......... ... .. ..+ ........++..+.+++.+||..||++|| +++++++.|...++..
T Consensus 230 PF~~~~~~ki~-~~~---~i----------~~P-~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~lq~~ 294 (932)
T PRK13184 230 PYRRKKGRKIS-YRD---VI----------LSP-IEVAPYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHLQGS 294 (932)
T ss_pred CCCCcchhhhh-hhh---hc----------cCh-hhccccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhcC
Confidence 99753221100 000 00 000 00000113557789999999999999996 5777778888777643
No 195
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=9e-42 Score=317.64 Aligned_cols=245 Identities=28% Similarity=0.360 Sum_probs=190.5
Q ss_pred ceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCC---cccHHHHHHHHH-HhhcCCCCccceeeeeeecCCcccceE
Q 035862 78 LKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG---LQGHKQWLAEVQ-FLGVVSHPNLVKLLGYCSTEDERGIQR 153 (393)
Q Consensus 78 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~-~l~~l~h~niv~~~~~~~~~~~~~~~~ 153 (393)
+.||+|+||+||+|.+..+ +..+|+|++.... ......+..|.. +++.++||||+++++++...+ ..
T Consensus 1 ~~lG~G~~g~V~~~~~~~~-----~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~----~~ 71 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLD-----GKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTE----KL 71 (325)
T ss_pred CceeeCCCeEEEEEEECCC-----CCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCC----EE
Confidence 3699999999999986543 3469999986532 122234445544 567799999999999988776 56
Q ss_pred EEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCCccC
Q 035862 154 LLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREG 233 (393)
Q Consensus 154 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~ 233 (393)
++||||+.+++|..++. ....+++..+..++.||+.||.|||+. ||+||||||+|||+++++.+||+|||++...
T Consensus 72 ~lv~e~~~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~al~~lH~~---givH~Dlkp~NIll~~~~~~kL~DfG~~~~~ 146 (325)
T cd05604 72 YFVLDFVNGGELFFHLQ--RERSFPEPRARFYAAEIASALGYLHSI---NIVYRDLKPENILLDSQGHVVLTDFGLCKEG 146 (325)
T ss_pred EEEEcCCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEeecCCcccC
Confidence 99999999999998884 345689999999999999999999998 9999999999999999999999999998753
Q ss_pred CCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcCCcccccc
Q 035862 234 PTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKFSMM 313 (393)
Q Consensus 234 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (393)
..... ......|++.|+|||++.+..++.++|||||||++|+|++|..||........ ....... .
T Consensus 147 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~--~~~~~~~-~--------- 212 (325)
T cd05604 147 IAQSD--TTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEM--YDNILHK-P--------- 212 (325)
T ss_pred CCCCC--CcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHHH--HHHHHcC-C---------
Confidence 22211 22346799999999999999999999999999999999999999976543221 1111100 0
Q ss_pred cCcccccccCHHHHHHHHHHHHHhcccCCCCCCCH----HHHHHHHH
Q 035862 314 IDPRLRNQYSINAARRVAKLADNCLKKNPEERPTM----NQVVESLK 356 (393)
Q Consensus 314 ~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~----~~~l~~l~ 356 (393)
. ......+..+.+++.+||+.+|.+||++ .++++|.|
T Consensus 213 ----~--~~~~~~~~~~~~ll~~ll~~~p~~R~~~~~~~~~i~~h~~ 253 (325)
T cd05604 213 ----L--VLRPGASLTAWSILEELLEKDRQRRLGAKEDFLEIQEHPF 253 (325)
T ss_pred ----c--cCCCCCCHHHHHHHHHHhccCHHhcCCCCCCHHHHhcCCC
Confidence 0 0111245678899999999999999977 47777644
No 196
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=1.8e-40 Score=298.34 Aligned_cols=249 Identities=33% Similarity=0.535 Sum_probs=202.9
Q ss_pred cCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcccHHHHHHHHHHhhcCCCCccceeeeeeecCCcccc
Q 035862 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGI 151 (393)
Q Consensus 72 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 151 (393)
++|++.+.||.|+||.||+|... +..|++|.+..... ..+++.+|+.+++.++|+||+++++++...+
T Consensus 6 ~~~~~~~~ig~g~~g~v~~~~~~-------~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~---- 73 (256)
T cd05039 6 KELKLGATIGKGEFGDVMLGDYR-------GQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQGN---- 73 (256)
T ss_pred hhccceeeeecCCCceEEEEEec-------CcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEcCCC----
Confidence 56899999999999999999853 23599999976643 4567889999999999999999999988755
Q ss_pred eEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCCc
Q 035862 152 QRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAR 231 (393)
Q Consensus 152 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~ 231 (393)
..++||||+.+++|.+++.......+++..++.++.|++.||.|||+. +++|+||||+||++++++.++|+|||.+.
T Consensus 74 ~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~Nili~~~~~~~l~d~g~~~ 150 (256)
T cd05039 74 PLYIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEK---NFVHRDLAARNVLVSEDLVAKVSDFGLAK 150 (256)
T ss_pred CeEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CccchhcccceEEEeCCCCEEEccccccc
Confidence 459999999999999999765555789999999999999999999998 99999999999999999999999999998
Q ss_pred cCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHh-CCCccCCCCchhhhHHHHHHhhcCcCCccc
Q 035862 232 EGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILT-GRRVLERNRPTMEQKLLEWVKQFPADGKKF 310 (393)
Q Consensus 232 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (393)
...... .....+..|+|||.+.+..++.++||||||+++|+|++ |..||....... +.......
T Consensus 151 ~~~~~~-----~~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~---~~~~~~~~------- 215 (256)
T cd05039 151 EASQGQ-----DSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD---VVPHVEKG------- 215 (256)
T ss_pred cccccc-----ccCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHH---HHHHHhcC-------
Confidence 653221 12334567999999988889999999999999999997 999987553321 11111110
Q ss_pred ccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 035862 311 SMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKL 357 (393)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~ 357 (393)
.....+...+..+.+++.+||..+|++||++.++++.|..
T Consensus 216 -------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 255 (256)
T cd05039 216 -------YRMEAPEGCPPEVYKVMKDCWELDPAKRPTFKQLREQLAL 255 (256)
T ss_pred -------CCCCCccCCCHHHHHHHHHHhccChhhCcCHHHHHHHHhc
Confidence 0011112345789999999999999999999999999864
No 197
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=1.2e-40 Score=301.45 Aligned_cols=259 Identities=25% Similarity=0.379 Sum_probs=204.9
Q ss_pred cCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCC---cccHHHHHHHHHHhhcCCCCccceeeeeeecCCc
Q 035862 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG---LQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDE 148 (393)
Q Consensus 72 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 148 (393)
++|++.+.||+|+||.||+|.+..++ ..+++|.+.... ......+.+|+.+++.++||||+++++++...+
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~-----~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~- 75 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDG-----VPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDN- 75 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCC-----ceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCC-
Confidence 46888999999999999999865433 458999876432 223356788999999999999999999998766
Q ss_pred ccceEEEEEeecCCCChHHHHhh--cCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEee
Q 035862 149 RGIQRLLVYEYMPNRSLEDRLFS--RAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSD 226 (393)
Q Consensus 149 ~~~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~D 226 (393)
..+++|||+.+++|.+++.. .....+++..++.++.|++.||.|||+. |++|+||||+||+++.++.++|+|
T Consensus 76 ---~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~d 149 (267)
T cd08229 76 ---ELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGD 149 (267)
T ss_pred ---eEEEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEECc
Confidence 56999999999999998853 2345689999999999999999999998 999999999999999999999999
Q ss_pred ccCCccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcC
Q 035862 227 FGLAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPAD 306 (393)
Q Consensus 227 fg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~ 306 (393)
||++........ ......++..|+|||.+.+..++.++|+||||+++|+|++|..||.......... .......
T Consensus 150 fg~~~~~~~~~~--~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~-~~~~~~~--- 223 (267)
T cd08229 150 LGLGRFFSSKTT--AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSL-CKKIEQC--- 223 (267)
T ss_pred chhhhccccCCc--ccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHHHH-hhhhhcC---
Confidence 999876433221 1234568899999999988889999999999999999999999996543321111 1111100
Q ss_pred CcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q 035862 307 GKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLA 358 (393)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~ 358 (393)
..........+..+.+++.+||..||++|||+.++++.+..+
T Consensus 224 ----------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~ 265 (267)
T cd08229 224 ----------DYPPLPSDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRM 265 (267)
T ss_pred ----------CCCCCCcccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhh
Confidence 000111123567899999999999999999999999988765
No 198
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=1.1e-40 Score=310.56 Aligned_cols=269 Identities=19% Similarity=0.287 Sum_probs=198.2
Q ss_pred ccceeccc--CCceEEEEEEcCCCCCCCceEEEEEEecCCCc--ccHHHHHHHHHHhhcCCCCccceeeeeeecCCcccc
Q 035862 76 RMLKIGEG--GFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL--QGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGI 151 (393)
Q Consensus 76 ~~~~lg~G--~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 151 (393)
++.+||+| +|++||++..+.++ ..||+|.+..... .....+.+|+.+++.++||||+++++++..++
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~---- 72 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTG-----EYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADN---- 72 (327)
T ss_pred hhhhccccccceEEEEEEeecccC-----cEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECC----
Confidence 45689999 67899999865444 4699999875432 23345678999999999999999999998776
Q ss_pred eEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCCc
Q 035862 152 QRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAR 231 (393)
Q Consensus 152 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~ 231 (393)
..++||||+++++|.+++.......+++..++.++.|++.||.|||++ +|+||||||+|||++.++.++++||+...
T Consensus 73 ~~~lv~e~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~iiH~dlkp~Nil~~~~~~~~l~~~~~~~ 149 (327)
T cd08227 73 ELWVVTSFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNL 149 (327)
T ss_pred EEEEEEeccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCChhhEEEecCCcEEEcccchhh
Confidence 569999999999999998655555689999999999999999999998 99999999999999999999999998654
Q ss_pred cCCCCCCc-----cccccccccCCccCcccccc--CCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHh-hc
Q 035862 232 EGPTGDHT-----HVSTAVVGTYGYAAPEYIET--GHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVK-QF 303 (393)
Q Consensus 232 ~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~-~~ 303 (393)
........ .......++..|+|||++.+ ..++.++|||||||++|+|++|..||........ ...... ..
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~--~~~~~~~~~ 227 (327)
T cd08227 150 SMINHGQRLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQM--LLEKLNGTV 227 (327)
T ss_pred ccccccccccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHH--HHHHhcCCc
Confidence 32211110 01122356778999999876 4689999999999999999999999975432211 111000 00
Q ss_pred CcC-------Cccc---------cc-c------------cCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 035862 304 PAD-------GKKF---------SM-M------------IDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVES 354 (393)
Q Consensus 304 ~~~-------~~~~---------~~-~------------~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~ 354 (393)
+.. .... .. . ............++..+.+|+.+||+.||++|||+.++++|
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~ 307 (327)
T cd08227 228 PCLLDTTTIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNH 307 (327)
T ss_pred cccccccchhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcC
Confidence 000 0000 00 0 00000111222456789999999999999999999999999
Q ss_pred HHHH
Q 035862 355 LKLA 358 (393)
Q Consensus 355 l~~~ 358 (393)
.|..
T Consensus 308 p~f~ 311 (327)
T cd08227 308 SFFK 311 (327)
T ss_pred hhhh
Confidence 8864
No 199
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=1.3e-40 Score=302.42 Aligned_cols=244 Identities=24% Similarity=0.407 Sum_probs=190.2
Q ss_pred eecccCCceEEEEEEcCCC-------------------CCCCceEEEEEEecCCCcccHHHHHHHHHHhhcCCCCcccee
Q 035862 79 KIGEGGFGSVYKGTIRPLD-------------------GRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKL 139 (393)
Q Consensus 79 ~lg~G~~g~Vy~~~~~~~~-------------------~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~ 139 (393)
.||+|+||.||+|.....+ .......|++|.+..........+.+|+.+++.++||||+++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~ 81 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV 81 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 6999999999999854221 223446789999876554445667889999999999999999
Q ss_pred eeeeecCCcccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCC
Q 035862 140 LGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGN 219 (393)
Q Consensus 140 ~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~ 219 (393)
++++...+ ..++||||+++++|..++... ...+++..+..++.|++.||+|||+. +|+||||||+|||++..
T Consensus 82 ~~~~~~~~----~~~lv~ey~~~g~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~Nill~~~ 153 (274)
T cd05076 82 HGVCVRGS----ENIMVEEFVEHGPLDVCLRKE-KGRVPVAWKITVAQQLASALSYLEDK---NLVHGNVCAKNILLARL 153 (274)
T ss_pred EEEEEeCC----ceEEEEecCCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHcC---CccCCCCCcccEEEecc
Confidence 99998776 459999999999999988543 34688999999999999999999998 99999999999999765
Q ss_pred C-------ceEEeeccCCccCCCCCCccccccccccCCccCcccccc-CCCCchhhHHHHHHHHHHHH-hCCCccCCCCc
Q 035862 220 F-------KPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIET-GHLKSQSDIWSFGVVLYEIL-TGRRVLERNRP 290 (393)
Q Consensus 220 ~-------~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslGvil~ell-tg~~pf~~~~~ 290 (393)
+ .+|++|||++...... ....++..|+|||.+.+ ..++.++|||||||++|||+ +|..||....+
T Consensus 154 ~~~~~~~~~~kl~d~g~~~~~~~~------~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~ 227 (274)
T cd05076 154 GLAEGTSPFIKLSDPGVSFTALSR------EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTP 227 (274)
T ss_pred CcccCccceeeecCCccccccccc------cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccCh
Confidence 4 3899999987643221 22357788999998865 56899999999999999985 69999976544
Q ss_pred hhhhHHHHHHhhcCcCCcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 035862 291 TMEQKLLEWVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESL 355 (393)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l 355 (393)
............ .+...+..+.+++.+||+.+|++||++.+++++|
T Consensus 228 ~~~~~~~~~~~~-------------------~~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~L 273 (274)
T cd05076 228 SEKERFYEKKHR-------------------LPEPSCKELATLISQCLTYEPTQRPSFRTILRDL 273 (274)
T ss_pred HHHHHHHHhccC-------------------CCCCCChHHHHHHHHHcccChhhCcCHHHHHHhh
Confidence 322211110000 0011235689999999999999999999999886
No 200
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=2.9e-40 Score=299.07 Aligned_cols=260 Identities=25% Similarity=0.444 Sum_probs=203.9
Q ss_pred cCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCC-cccHHHHHHHHHHhhcCCCCccceeeeeeecCCccc
Q 035862 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG-LQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERG 150 (393)
Q Consensus 72 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 150 (393)
++|+..+.||+|+||.||+|.+.... .....+++|.+.... ......+.+|+++++.++|||++++.+++...+
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~--~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--- 79 (268)
T cd05063 5 SHITKQKVIGAGEFGEVFRGILKMPG--RKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFK--- 79 (268)
T ss_pred HHceEeeEecCCCCccEEEEEEecCC--CCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCC---
Confidence 46888899999999999999875432 234578999887542 233456788999999999999999999998766
Q ss_pred ceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCC
Q 035862 151 IQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLA 230 (393)
Q Consensus 151 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a 230 (393)
..++||||+++++|.+++... ...+++..+..++.|++.||+|||+. +++|+||||+||++++++.+||+|||++
T Consensus 80 -~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~ 154 (268)
T cd05063 80 -PAMIITEYMENGALDKYLRDH-DGEFSSYQLVGMLRGIAAGMKYLSDM---NYVHRDLAARNILVNSNLECKVSDFGLS 154 (268)
T ss_pred -CcEEEEEcCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEEcCCCcEEECCCccc
Confidence 459999999999999998543 35689999999999999999999998 9999999999999999999999999998
Q ss_pred ccCCCCCCccc-cccccccCCccCccccccCCCCchhhHHHHHHHHHHHHh-CCCccCCCCchhhhHHHHHHhhcCcCCc
Q 035862 231 REGPTGDHTHV-STAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILT-GRRVLERNRPTMEQKLLEWVKQFPADGK 308 (393)
Q Consensus 231 ~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 308 (393)
........... ......+..|+|||++.+..++.++|||||||++|||++ |..||....... ........
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~---~~~~i~~~----- 226 (268)
T cd05063 155 RVLEDDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHE---VMKAINDG----- 226 (268)
T ss_pred eecccccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHH---HHHHHhcC-----
Confidence 76543222111 111223457999999988889999999999999999997 999997554321 11111110
Q ss_pred ccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q 035862 309 KFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLA 358 (393)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~ 358 (393)
.....+..++..+.+++.+||..+|++||++.++++.|..+
T Consensus 227 ---------~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 227 ---------FRLPAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred ---------CCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 01111123457789999999999999999999999999875
No 201
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=3.4e-40 Score=298.23 Aligned_cols=259 Identities=25% Similarity=0.369 Sum_probs=205.7
Q ss_pred cCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCC---CcccHHHHHHHHHHhhcCCCCccceeeeeeecCCc
Q 035862 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNH---GLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDE 148 (393)
Q Consensus 72 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 148 (393)
++|++.+.||+|+||.||+|....++ ..|++|.+... .......+.+|+++++.++|+|++++++.+...+
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~-----~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~- 75 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDG-----RVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENN- 75 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCC-----CEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCC-
Confidence 57999999999999999999975333 45899987642 2223456889999999999999999999998765
Q ss_pred ccceEEEEEeecCCCChHHHHhhc--CCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEee
Q 035862 149 RGIQRLLVYEYMPNRSLEDRLFSR--AQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSD 226 (393)
Q Consensus 149 ~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~D 226 (393)
..++||||+++++|.+++... ....+++..++.++.|++.||.|||+. |++||||+|+||+++.++.++|+|
T Consensus 76 ---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~nil~~~~~~~~l~d 149 (267)
T cd08224 76 ---ELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSK---RIMHRDIKPANVFITATGVVKLGD 149 (267)
T ss_pred ---eEEEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecCCcChhhEEECCCCcEEEec
Confidence 559999999999999988542 235588999999999999999999998 999999999999999999999999
Q ss_pred ccCCccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcC
Q 035862 227 FGLAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPAD 306 (393)
Q Consensus 227 fg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~ 306 (393)
||++........ ......++..|+|||.+.+..++.++|+|||||++|+|++|..||.......... ......
T Consensus 150 ~~~~~~~~~~~~--~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~-~~~~~~---- 222 (267)
T cd08224 150 LGLGRFFSSKTT--AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSL-CKKIEK---- 222 (267)
T ss_pred cceeeeccCCCc--ccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCccHHHH-Hhhhhc----
Confidence 999876433221 1233468889999999998899999999999999999999999996543221111 111000
Q ss_pred CcccccccCcccccccC-HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHH
Q 035862 307 GKKFSMMIDPRLRNQYS-INAARRVAKLADNCLKKNPEERPTMNQVVESLKLAV 359 (393)
Q Consensus 307 ~~~~~~~~~~~~~~~~~-~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~~ 359 (393)
......+ ...+..+.+++.+||..+|++||++.++++.+..+.
T Consensus 223 ----------~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~ 266 (267)
T cd08224 223 ----------CDYPPLPADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEMH 266 (267)
T ss_pred ----------CCCCCCChhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence 0001111 145678999999999999999999999999998763
No 202
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=8.9e-41 Score=305.15 Aligned_cols=268 Identities=25% Similarity=0.337 Sum_probs=199.3
Q ss_pred CCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCC--cccHHHHHHHHHHhhcCCCCccceeeeeeecCCccc
Q 035862 73 GFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG--LQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERG 150 (393)
Q Consensus 73 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 150 (393)
+|++.+.||+|++|.||+|.+..+ +..|++|.+.... ......+.+|+.+++.++||||+++++++..++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~-----~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--- 72 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKT-----GQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQES--- 72 (285)
T ss_pred CceEeeEecccCceEEEEEEECCC-----CcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCC---
Confidence 488899999999999999986533 3469999886432 223456788999999999999999999998765
Q ss_pred ceEEEEEeecCCCChHHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccC
Q 035862 151 IQRLLVYEYMPNRSLEDRLFSRA-QPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGL 229 (393)
Q Consensus 151 ~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~ 229 (393)
..++||||+. ++|.+++.... ...+++..++.++.|++.||.|||+. +++|+||||+||+++.++.++|+|||+
T Consensus 73 -~~~~v~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~ 147 (285)
T cd07861 73 -RLYLIFEFLS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSR---RVLHRDLKPQNLLIDNKGVIKLADFGL 147 (285)
T ss_pred -eEEEEEecCC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEEcCCCcEEECcccc
Confidence 5699999996 58988885433 35689999999999999999999998 999999999999999999999999999
Q ss_pred CccCCCCCCccccccccccCCccCcccccc-CCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHH-HHHHhhcCcC-
Q 035862 230 AREGPTGDHTHVSTAVVGTYGYAAPEYIET-GHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKL-LEWVKQFPAD- 306 (393)
Q Consensus 230 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~-~~~~~~~~~~- 306 (393)
+....... .......+++.|+|||.+.+ ..++.++|||||||++|+|+||+.||........... ..........
T Consensus 148 ~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (285)
T cd07861 148 ARAFGIPV--RVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDV 225 (285)
T ss_pred eeecCCCc--ccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhh
Confidence 87543221 12233467889999998865 4578999999999999999999999976543221111 0000000000
Q ss_pred ----------CcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 035862 307 ----------GKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLK 356 (393)
Q Consensus 307 ----------~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~ 356 (393)
............ ......++.++.++|.+||+.||.+|||+.++++|.|
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~~~ 284 (285)
T cd07861 226 WPGVTSLPDYKNTFPKWKKGSL-RSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNHPY 284 (285)
T ss_pred hhcchhhHHHHhhccccCcchh-HHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcCCC
Confidence 000000000000 0011135678899999999999999999999998754
No 203
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=2.6e-40 Score=303.82 Aligned_cols=268 Identities=27% Similarity=0.444 Sum_probs=201.8
Q ss_pred cCCcccceecccCCceEEEEEEcCC-----------CCCCCceEEEEEEecCCC-cccHHHHHHHHHHhhcCCCCcccee
Q 035862 72 NGFNRMLKIGEGGFGSVYKGTIRPL-----------DGRGEPLVVAVKKLNNHG-LQGHKQWLAEVQFLGVVSHPNLVKL 139 (393)
Q Consensus 72 ~~y~~~~~lg~G~~g~Vy~~~~~~~-----------~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~ 139 (393)
++|++.+.||+|+||.||++.+... ........+|+|.+.... ......+.+|+.+++.++|+||+++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~ 84 (296)
T cd05095 5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRL 84 (296)
T ss_pred hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceE
Confidence 5699999999999999999864321 122345679999987543 2334578899999999999999999
Q ss_pred eeeeecCCcccceEEEEEeecCCCChHHHHhhcCC---------CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCC
Q 035862 140 LGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQ---------PTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFK 210 (393)
Q Consensus 140 ~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~---------~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dik 210 (393)
++++...+ ..++||||+.+++|.+++..... ..+++..++.++.|++.||+|||+. +++|+|||
T Consensus 85 ~~~~~~~~----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dlk 157 (296)
T cd05095 85 LAVCITSD----PLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSL---NFVHRDLA 157 (296)
T ss_pred EEEEecCC----ccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHC---CeecccCC
Confidence 99998776 35999999999999999864321 2467788999999999999999998 99999999
Q ss_pred CCCeEeCCCCceEEeeccCCccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHh--CCCccCCC
Q 035862 211 TSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILT--GRRVLERN 288 (393)
Q Consensus 211 p~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ellt--g~~pf~~~ 288 (393)
|+|||++.++.++|+|||++................++..|+|||...+..++.++|||||||++|||++ |..||...
T Consensus 158 p~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~ 237 (296)
T cd05095 158 TRNCLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQL 237 (296)
T ss_pred hheEEEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCcccc
Confidence 9999999999999999999876433322222223345678999999888889999999999999999998 66787644
Q ss_pred CchhhhHHHHHHhhcCcCCcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 035862 289 RPTMEQKLLEWVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLK 356 (393)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~ 356 (393)
..... .......+..... ......+..++..+.+|+.+||+.||++||++.++++.|.
T Consensus 238 ~~~~~--~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~ 295 (296)
T cd05095 238 SDEQV--IENTGEFFRDQGR--------QVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLL 295 (296)
T ss_pred ChHHH--HHHHHHHHhhccc--------cccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 32211 1110000000000 0000111234578899999999999999999999999875
No 204
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00 E-value=8.9e-42 Score=291.91 Aligned_cols=260 Identities=23% Similarity=0.315 Sum_probs=208.6
Q ss_pred hcCCccc-ceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcccHHHHHHHHHHhhcCC-CCccceeeeeeecCCc
Q 035862 71 TNGFNRM-LKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVS-HPNLVKLLGYCSTEDE 148 (393)
Q Consensus 71 ~~~y~~~-~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~ 148 (393)
+++|.+. ++||-|-.|.|-.+..+.++++ +|+|++... ....+|+++.-..+ |||||.++++|...-.
T Consensus 60 tedY~is~qvLG~GinGkV~~C~~k~T~ek-----fALKvL~Ds-----~KARrEVeLHw~~s~h~~iV~IidVyeNs~~ 129 (400)
T KOG0604|consen 60 TEDYSISWQVLGAGINGKVVQCVHKRTQEK-----FALKVLLDS-----PKARREVELHWMASGHPHIVSIIDVYENSYQ 129 (400)
T ss_pred hhhheehhhhhccccCCceEEEEeccchhh-----hHHHHHhcC-----HHHHhHhhhhhhhcCCCceEEeehhhhhhcc
Confidence 4566653 5699999999999998777765 999998654 34567888766665 9999999999987766
Q ss_pred ccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCC---CceEEe
Q 035862 149 RGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGN---FKPKLS 225 (393)
Q Consensus 149 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~---~~~kl~ 225 (393)
....+.+|||.++||.|...+.++....+++.++..|+.||+.|+.|||+. +|.||||||+|+|.+.+ ..+||+
T Consensus 130 ~rkcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~---nIAHRDlKpENLLyt~t~~na~lKLt 206 (400)
T KOG0604|consen 130 GRKCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSM---NIAHRDLKPENLLYTTTSPNAPLKLT 206 (400)
T ss_pred CceeeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhc---chhhccCChhheeeecCCCCcceEec
Confidence 666788999999999999999888888899999999999999999999998 99999999999999654 469999
Q ss_pred eccCCccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchh-hhHHHHHHh--h
Q 035862 226 DFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTM-EQKLLEWVK--Q 302 (393)
Q Consensus 226 Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~-~~~~~~~~~--~ 302 (393)
|||+|+..... ....+.+.||.|.|||++....|+...|+||+||++|-|++|.+||..+.... ...+..... +
T Consensus 207 DfGFAK~t~~~---~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~gq 283 (400)
T KOG0604|consen 207 DFGFAKETQEP---GDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTGQ 283 (400)
T ss_pred ccccccccCCC---ccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhccC
Confidence 99999864322 23345788999999999999999999999999999999999999997653211 001111000 0
Q ss_pred cCcCCcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHH
Q 035862 303 FPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAV 359 (393)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~~ 359 (393)
+.+ ..+-=..+|++..++|+.+|..+|.+|.|+.++++|.|..-
T Consensus 284 y~F-------------P~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~hpwi~~ 327 (400)
T KOG0604|consen 284 YEF-------------PEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDHPWINQ 327 (400)
T ss_pred ccC-------------CChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcCchhcc
Confidence 000 00001257899999999999999999999999999998653
No 205
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=6e-41 Score=306.24 Aligned_cols=275 Identities=25% Similarity=0.390 Sum_probs=203.7
Q ss_pred CCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCC-cccHHHHHHHHHHhhcCCCCccceeeeeeecCCcccc
Q 035862 73 GFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG-LQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGI 151 (393)
Q Consensus 73 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 151 (393)
-|++++.||+|+||.||++.+... ....+..|++|.+.... ......+.+|+.+++.++||||+++++++...+..
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~-~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~-- 81 (284)
T cd05079 5 FLKRIRDLGEGHFGKVELCRYDPE-GDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGN-- 81 (284)
T ss_pred hhhhceecCCCCceeEEEEEEccC-CCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCC--
Confidence 478899999999999999986422 23455679999987543 23345688999999999999999999988775433
Q ss_pred eEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCCc
Q 035862 152 QRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAR 231 (393)
Q Consensus 152 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~ 231 (393)
..++||||+++++|.+++.... ..+++..++.++.|++.||+|||++ |++||||||+||+++.++.++|+|||++.
T Consensus 82 ~~~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~i~~~i~~aL~~lH~~---gi~H~dlkp~Nil~~~~~~~~l~dfg~~~ 157 (284)
T cd05079 82 GIKLIMEFLPSGSLKEYLPRNK-NKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTK 157 (284)
T ss_pred ceEEEEEccCCCCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccchheEEEcCCCCEEECCCcccc
Confidence 4589999999999999985432 3589999999999999999999998 99999999999999999999999999998
Q ss_pred cCCCCCCc-cccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcCC--c
Q 035862 232 EGPTGDHT-HVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADG--K 308 (393)
Q Consensus 232 ~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~--~ 308 (393)
........ .......++..|+|||.+.+..++.++|||||||++|+|++++.|+.......... ........ .
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~----~~~~~~~~~~~ 233 (284)
T cd05079 158 AIETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKM----IGPTHGQMTVT 233 (284)
T ss_pred ccccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhh----cccccccccHH
Confidence 65433221 11223456778999999988889999999999999999999877653221100000 00000000 0
Q ss_pred ccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q 035862 309 KFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLA 358 (393)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~ 358 (393)
.....+........+..++..+.+|+.+||+.+|++||++.++++.++.+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 234 RLVRVLEEGKRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred HHHHHHHcCccCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 00000000001111223567899999999999999999999999999875
No 206
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=5.1e-40 Score=299.34 Aligned_cols=263 Identities=25% Similarity=0.416 Sum_probs=207.1
Q ss_pred cCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCc-ccHHHHHHHHHHhhcCCCCccceeeeeeecCCccc
Q 035862 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL-QGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERG 150 (393)
Q Consensus 72 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 150 (393)
.+|++.+.||+|+||.||+|.+..++ ......+++|.+..... .....+.+|+.+++.++||||+++++++.. .
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~-~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~--- 81 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEG-EKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-S--- 81 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCC-CCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-C---
Confidence 46889999999999999999876443 33455789998876543 234567889999999999999999999876 2
Q ss_pred ceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCC
Q 035862 151 IQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLA 230 (393)
Q Consensus 151 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a 230 (393)
..++||||+.+++|.+++.... ..+++..++.++.|++.||+|||+. +++||||||+||++++++.+||+|||++
T Consensus 82 -~~~~v~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~di~p~nil~~~~~~~kL~dfg~~ 156 (279)
T cd05057 82 -QVQLITQLMPLGCLLDYVRNHK-DNIGSQYLLNWCVQIAKGMSYLEEK---RLVHRDLAARNVLVKTPQHVKITDFGLA 156 (279)
T ss_pred -ceEEEEecCCCCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhC---CEEecccCcceEEEcCCCeEEECCCccc
Confidence 4589999999999999986543 3489999999999999999999998 9999999999999999999999999999
Q ss_pred ccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHh-CCCccCCCCchhhhHHHHHHhhcCcCCcc
Q 035862 231 REGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILT-GRRVLERNRPTMEQKLLEWVKQFPADGKK 309 (393)
Q Consensus 231 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 309 (393)
................++..|+|||.+....++.++|+||||+++||+++ |..||........ ...... +..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~---~~~~~~----~~~ 229 (279)
T cd05057 157 KLLDVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEI---PDLLEK----GER 229 (279)
T ss_pred ccccCcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHHH---HHHHhC----CCC
Confidence 86543322212222234568999999988899999999999999999998 9999976543221 111111 000
Q ss_pred cccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhh
Q 035862 310 FSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQE 361 (393)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~~~~ 361 (393)
...+..++..+.+++.+||..+|.+||++.++++.+..+.++
T Consensus 230 ----------~~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~~ 271 (279)
T cd05057 230 ----------LPQPPICTIDVYMVLVKCWMIDAESRPTFKELINEFSKMARD 271 (279)
T ss_pred ----------CCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhC
Confidence 001112346788999999999999999999999999988654
No 207
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=3.3e-40 Score=304.18 Aligned_cols=264 Identities=25% Similarity=0.415 Sum_probs=205.2
Q ss_pred cCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCc-ccHHHHHHHHHHhhcCCCCccceeeeeeecCCccc
Q 035862 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL-QGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERG 150 (393)
Q Consensus 72 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 150 (393)
++|+..+.||+|+||.||+|.+..++. .....+++|.+..... .....+.+|+.+++.++||||+++++++....
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~-~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~--- 82 (303)
T cd05110 7 TELKRVKVLGSGAFGTVYKGIWVPEGE-TVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSPT--- 82 (303)
T ss_pred hhceeccccccCCCccEEEEEEecCCC-cceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCCC---
Confidence 468889999999999999998764432 2234678898875432 22345788999999999999999999886543
Q ss_pred ceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCC
Q 035862 151 IQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLA 230 (393)
Q Consensus 151 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a 230 (393)
.++++||+.+|+|.+++... ...+++..++.++.|++.||.|||++ +++|+||||+||++++++.+||+|||++
T Consensus 83 --~~~v~e~~~~g~l~~~~~~~-~~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dikp~Nill~~~~~~kL~Dfg~~ 156 (303)
T cd05110 83 --IQLVTQLMPHGCLLDYVHEH-KDNIGSQLLLNWCVQIAKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLA 156 (303)
T ss_pred --ceeeehhcCCCCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHhhc---CeeccccccceeeecCCCceEEcccccc
Confidence 37899999999999998543 33578899999999999999999998 9999999999999999999999999999
Q ss_pred ccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHh-CCCccCCCCchhhhHHHHHHhhcCcCCcc
Q 035862 231 REGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILT-GRRVLERNRPTMEQKLLEWVKQFPADGKK 309 (393)
Q Consensus 231 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 309 (393)
................++..|+|||.+.+..++.++|||||||++|||++ |..||.......... ..... ..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~~~---~~~~~----~~ 229 (303)
T cd05110 157 RLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPD---LLEKG----ER 229 (303)
T ss_pred ccccCcccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHH---HHHCC----CC
Confidence 86543322222223455678999999998999999999999999999997 889987543322211 11110 00
Q ss_pred cccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhh
Q 035862 310 FSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQES 362 (393)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~~~~~ 362 (393)
. ..+..++..+.+++.+||..+|++||++.++++.+..+..+.
T Consensus 230 ~----------~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~~~ 272 (303)
T cd05110 230 L----------PQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMARDP 272 (303)
T ss_pred C----------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhch
Confidence 0 001123467899999999999999999999999999876554
No 208
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=2.5e-40 Score=297.84 Aligned_cols=253 Identities=35% Similarity=0.578 Sum_probs=203.5
Q ss_pred ceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCccc-HHHHHHHHHHhhcCCCCccceeeeeeecCCcccceEEEE
Q 035862 78 LKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQG-HKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLV 156 (393)
Q Consensus 78 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv 156 (393)
+.||+|+||.||+|.+.... .....+++|.+....... ...+.+|+.+++.++|+||+++++++.... ..++|
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~--~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~----~~~lv 74 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKD--GKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEE----PLYLV 74 (262)
T ss_pred CccccCCceEEEEEEEecCC--CCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCC----ceEEE
Confidence 36999999999999876431 234569999988664333 567889999999999999999999988754 56999
Q ss_pred EeecCCCChHHHHhhcC-------CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccC
Q 035862 157 YEYMPNRSLEDRLFSRA-------QPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGL 229 (393)
Q Consensus 157 ~e~~~~~~L~~~l~~~~-------~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~ 229 (393)
|||+.+++|.+++.... ...+++..++.++.|++.||+|||++ +++|+||+|+||++++++.++|+|||.
T Consensus 75 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~nili~~~~~~~l~dfg~ 151 (262)
T cd00192 75 LEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASK---KFVHRDLAARNCLVGEDLVVKISDFGL 151 (262)
T ss_pred EEeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcC---CcccCccCcceEEECCCCcEEEccccc
Confidence 99999999999986542 36689999999999999999999998 999999999999999999999999999
Q ss_pred CccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHh-CCCccCCCCchhhhHHHHHHhhcCcCCc
Q 035862 230 AREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILT-GRRVLERNRPTMEQKLLEWVKQFPADGK 308 (393)
Q Consensus 230 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 308 (393)
+................++..|+|||.+....++.++||||||+++|+|++ |..||....... .......
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~---~~~~~~~------ 222 (262)
T cd00192 152 SRDVYDDDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEE---VLEYLRK------ 222 (262)
T ss_pred ccccccccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHH---HHHHHHc------
Confidence 987654432223344567889999999988899999999999999999999 699997653321 1111111
Q ss_pred ccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 035862 309 KFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLK 356 (393)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~ 356 (393)
......+..++.++.+++.+||+.+|.+|||+.+++++|+
T Consensus 223 --------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 223 --------GYRLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred --------CCCCCCCccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 0011122344688999999999999999999999999873
No 209
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=2.7e-40 Score=299.62 Aligned_cols=261 Identities=27% Similarity=0.394 Sum_probs=205.3
Q ss_pred cCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCC-cccHHHHHHHHHHhhcCCCCccceeeeeeecCCccc
Q 035862 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG-LQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERG 150 (393)
Q Consensus 72 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 150 (393)
++|.+.+.||+|+||.||+|.+.... +....|++|...... ....+.+.+|+.+++.++||||+++++++...
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~--~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~---- 79 (270)
T cd05056 6 EDITLGRCIGEGQFGDVYQGVYMSPE--NEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITEN---- 79 (270)
T ss_pred hhceeeeeeCCccceeEEEEEEecCC--CCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcCC----
Confidence 46888999999999999999875331 334568999887654 33456788999999999999999999988653
Q ss_pred ceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCC
Q 035862 151 IQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLA 230 (393)
Q Consensus 151 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a 230 (393)
..++||||+.+++|.+++.... ..+++..++.++.|++.||.|||+. +++|+||||+||+++.++.++|+|||++
T Consensus 80 -~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~g~~ 154 (270)
T cd05056 80 -PVWIVMELAPLGELRSYLQVNK-YSLDLASLILYSYQLSTALAYLESK---RFVHRDIAARNVLVSSPDCVKLGDFGLS 154 (270)
T ss_pred -CcEEEEEcCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccChheEEEecCCCeEEccCcee
Confidence 2489999999999999985433 3589999999999999999999998 9999999999999999999999999998
Q ss_pred ccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHh-CCCccCCCCchhhhHHHHHHhhcCcCCcc
Q 035862 231 REGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILT-GRRVLERNRPTMEQKLLEWVKQFPADGKK 309 (393)
Q Consensus 231 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 309 (393)
......... ......++..|+|||.+....++.++||||||+++|+|++ |..||......... ..... +.
T Consensus 155 ~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~---~~~~~----~~- 225 (270)
T cd05056 155 RYLEDESYY-KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVI---GRIEN----GE- 225 (270)
T ss_pred eecccccce-ecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHH---HHHHc----CC-
Confidence 765433211 1222334568999999988889999999999999999996 99999765432211 11111 00
Q ss_pred cccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhh
Q 035862 310 FSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQE 361 (393)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~~~~ 361 (393)
....+..++..+.+++.+||..+|.+|||+.++++.|..+..+
T Consensus 226 ---------~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~~ 268 (270)
T cd05056 226 ---------RLPMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDILQE 268 (270)
T ss_pred ---------cCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 0011223457899999999999999999999999999987654
No 210
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=2.5e-40 Score=298.26 Aligned_cols=255 Identities=32% Similarity=0.449 Sum_probs=203.4
Q ss_pred hcCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcccHHHHHHHHHHhhcCCCCccceeeeeeecCCccc
Q 035862 71 TNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERG 150 (393)
Q Consensus 71 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 150 (393)
.++|.+.+.||.|+||.||+|.+... ..+++|.+.... .....+.+|+.+++.++|+||+++++++....
T Consensus 5 ~~~~~i~~~ig~g~~~~v~~~~~~~~------~~~~vK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--- 74 (261)
T cd05034 5 RESLKLERKLGAGQFGEVWMGTWNGT------TKVAVKTLKPGT-MSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEE--- 74 (261)
T ss_pred hhheeeeeeeccCcceEEEEEEEcCC------ceEEEEEecCCc-cCHHHHHHHHHHHhhCCCCCEeeeeeeeecCC---
Confidence 46799999999999999999986422 348999887644 34567889999999999999999999987655
Q ss_pred ceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCC
Q 035862 151 IQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLA 230 (393)
Q Consensus 151 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a 230 (393)
..++||||+++++|.+++.......+++..+..++.|++.|+.|||++ +++|+||||+||++++++.++|+|||++
T Consensus 75 -~~~~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~---~i~h~di~p~nili~~~~~~~l~d~g~~ 150 (261)
T cd05034 75 -PIYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESR---NYIHRDLAARNILVGENLVCKIADFGLA 150 (261)
T ss_pred -ceEEEEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcchheEEEcCCCCEEECccccc
Confidence 459999999999999999766556789999999999999999999999 9999999999999999999999999998
Q ss_pred ccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHh-CCCccCCCCchhhhHHHHHHhhcCcCCcc
Q 035862 231 REGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILT-GRRVLERNRPTMEQKLLEWVKQFPADGKK 309 (393)
Q Consensus 231 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 309 (393)
........ .......++..|+|||.+.+..++.++||||||+++|+|++ |+.||....... .........
T Consensus 151 ~~~~~~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~--~~~~~~~~~------ 221 (261)
T cd05034 151 RLIEDDEY-TAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNRE--VLEQVERGY------ 221 (261)
T ss_pred eeccchhh-hhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHH--HHHHHHcCC------
Confidence 76543211 11122234568999999998889999999999999999998 999997543321 111111110
Q ss_pred cccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 035862 310 FSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKL 357 (393)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~ 357 (393)
....+...+.++.+++.+||+.+|.+||+++++.+.|+.
T Consensus 222 ---------~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 222 ---------RMPRPPNCPEELYDLMLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred ---------CCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence 001111235779999999999999999999999988764
No 211
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1.1e-40 Score=306.44 Aligned_cols=258 Identities=24% Similarity=0.355 Sum_probs=206.8
Q ss_pred HhcCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcccHHHHHHHHHHhhcCCCCccceeeeeeecCCcc
Q 035862 70 ATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDER 149 (393)
Q Consensus 70 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 149 (393)
...+|.+.+.||.|+||.||+|.....+ ..|++|.+..........+.+|+.+++.++||||+++++++...+
T Consensus 17 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~-----~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~-- 89 (297)
T cd06656 17 PKKKYTRFEKIGQGASGTVYTAIDIATG-----QEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGD-- 89 (297)
T ss_pred hhhhceeeeeeccCCCeEEEEEEECCCC-----CEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCC--
Confidence 3468999999999999999999865333 369999987655455566788999999999999999999998766
Q ss_pred cceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccC
Q 035862 150 GIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGL 229 (393)
Q Consensus 150 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~ 229 (393)
..++||||+++++|.+++.. ..+++..+..++.|++.||.|||+. +++||||||+|||++.++.++|+|||+
T Consensus 90 --~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~l~~~L~~LH~~---~i~H~dL~p~Nili~~~~~~~l~Dfg~ 161 (297)
T cd06656 90 --ELWVVMEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALDFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGF 161 (297)
T ss_pred --EEEEeecccCCCCHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEECcCcc
Confidence 56999999999999998843 3478899999999999999999998 999999999999999999999999999
Q ss_pred CccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcCCcc
Q 035862 230 AREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKK 309 (393)
Q Consensus 230 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 309 (393)
+........ ......+++.|+|||.+.+..++.++|+|||||++|+|++|..||....+...... ..
T Consensus 162 ~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~--~~--------- 228 (297)
T cd06656 162 CAQITPEQS--KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYL--IA--------- 228 (297)
T ss_pred ceEccCCcc--CcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheee--ec---------
Confidence 875433221 12345688899999999988899999999999999999999999975433211000 00
Q ss_pred cccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHH
Q 035862 310 FSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAV 359 (393)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~~ 359 (393)
.........+...+..+.+|+.+||..+|++||++.+++++.|...
T Consensus 229 ----~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~ 274 (297)
T cd06656 229 ----TNGTPELQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQHPFLKL 274 (297)
T ss_pred ----cCCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCchhcc
Confidence 0000011112235577899999999999999999999999987654
No 212
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=3.2e-40 Score=297.61 Aligned_cols=256 Identities=25% Similarity=0.374 Sum_probs=204.6
Q ss_pred cCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcccHHHHHHHHHHhhcCCCCccceeeeeeecCCcccc
Q 035862 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGI 151 (393)
Q Consensus 72 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 151 (393)
++|++.+.||.|+||.||+|.+..++ ..+++|.+..........+.+|+.+++.++||||+++++.+...+
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~-----~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~---- 73 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATG-----ELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRD---- 73 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCC-----CEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCC----
Confidence 57999999999999999999875433 359999987655455677889999999999999999999987766
Q ss_pred eEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCCc
Q 035862 152 QRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAR 231 (393)
Q Consensus 152 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~ 231 (393)
.++++|||+.+++|.+++... ...+++..++.++.|++.||.|||+. +++|+||+|+||++++++.++|+|||++.
T Consensus 74 ~~~l~~e~~~~~~l~~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~ 149 (262)
T cd06613 74 KLWIVMEYCGGGSLQDIYQVT-RGPLSELQIAYVCRETLKGLAYLHET---GKIHRDIKGANILLTEDGDVKLADFGVSA 149 (262)
T ss_pred EEEEEEeCCCCCcHHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHHhC---CceecCCChhhEEECCCCCEEECccccch
Confidence 569999999999999988543 24689999999999999999999998 99999999999999999999999999987
Q ss_pred cCCCCCCccccccccccCCccCccccccC---CCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcCCc
Q 035862 232 EGPTGDHTHVSTAVVGTYGYAAPEYIETG---HLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGK 308 (393)
Q Consensus 232 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 308 (393)
....... ......++..|+|||.+.+. .++.++|+||||+++|+|++|..||....+........ ...+..
T Consensus 150 ~~~~~~~--~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~-~~~~~~--- 223 (262)
T cd06613 150 QLTATIA--KRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLIS-KSNFPP--- 223 (262)
T ss_pred hhhhhhh--ccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH-hccCCC---
Confidence 6433211 12345688899999999776 88999999999999999999999997654332211111 000000
Q ss_pred ccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 035862 309 KFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESL 355 (393)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l 355 (393)
.........+.++.+|+.+||..+|.+|||+.+++.+-
T Consensus 224 ---------~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~ 261 (262)
T cd06613 224 ---------PKLKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQHP 261 (262)
T ss_pred ---------ccccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhcCC
Confidence 00111234567899999999999999999999998763
No 213
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=1.8e-40 Score=307.91 Aligned_cols=268 Identities=23% Similarity=0.363 Sum_probs=191.7
Q ss_pred ceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcccHHHHHHHHHHhhcCCCCccceeeeeeecCCcccceEEEEE
Q 035862 78 LKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVY 157 (393)
Q Consensus 78 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv~ 157 (393)
.+||+|+||.||+|..... .....||+|.+.... ....+.+|+.+++.++||||+++++++...... ..++||
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~---~~~~~~a~k~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~--~~~lv~ 79 (317)
T cd07867 7 CKVGRGTYGHVYKAKRKDG---KDEKEYALKQIEGTG--ISMSACREIALLRELKHPNVIALQKVFLSHSDR--KVWLLF 79 (317)
T ss_pred eEeccCCCeeEEEEEecCC---CccceEEEEEecCCC--CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCC--eEEEEE
Confidence 5799999999999986432 244579999887543 234567899999999999999999998765443 569999
Q ss_pred eecCCCChHHHHhhc-------CCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEe----CCCCceEEee
Q 035862 158 EYMPNRSLEDRLFSR-------AQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLL----DGNFKPKLSD 226 (393)
Q Consensus 158 e~~~~~~L~~~l~~~-------~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll----~~~~~~kl~D 226 (393)
||+. ++|.+++... ....+++..++.++.|++.||.|||+. +++||||||+|||+ +.++.+||+|
T Consensus 80 e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~kl~D 155 (317)
T cd07867 80 DYAE-HDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIAD 155 (317)
T ss_pred eeeC-CcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEccCCCCCCcEEEee
Confidence 9995 4887776421 123578899999999999999999998 99999999999999 5667899999
Q ss_pred ccCCccCCCCCCc-cccccccccCCccCcccccc-CCCCchhhHHHHHHHHHHHHhCCCccCCCCchhh-------hHHH
Q 035862 227 FGLAREGPTGDHT-HVSTAVVGTYGYAAPEYIET-GHLKSQSDIWSFGVVLYEILTGRRVLERNRPTME-------QKLL 297 (393)
Q Consensus 227 fg~a~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~-------~~~~ 297 (393)
||+++........ .......||+.|+|||++.+ ..++.++|||||||++|||+||.+||........ ....
T Consensus 156 fG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~ 235 (317)
T cd07867 156 MGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLD 235 (317)
T ss_pred ccceeccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccccccccccccccHHHHH
Confidence 9999865432211 12234578999999999876 4589999999999999999999999965432211 1111
Q ss_pred HHHhhcCcCC-ccccc---------c---c-C-----ccc---ccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 035862 298 EWVKQFPADG-KKFSM---------M---I-D-----PRL---RNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESL 355 (393)
Q Consensus 298 ~~~~~~~~~~-~~~~~---------~---~-~-----~~~---~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l 355 (393)
.......... ..... . . . ..+ ........+..+.+|+.+||+.||.+|||+.|+++|.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~hp 315 (317)
T cd07867 236 RIFSVMGFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQDP 315 (317)
T ss_pred HHHHhcCCCChhhhhhhhhcccchhhhhhhcccccCCchhhhhhhcccCCCChHHHHHHHHHhccCcccccCHHHHhcCC
Confidence 1111000000 00000 0 0 0 000 0000011245688999999999999999999999986
Q ss_pred H
Q 035862 356 K 356 (393)
Q Consensus 356 ~ 356 (393)
|
T Consensus 316 ~ 316 (317)
T cd07867 316 Y 316 (317)
T ss_pred C
Confidence 5
No 214
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=3.4e-40 Score=298.54 Aligned_cols=260 Identities=26% Similarity=0.428 Sum_probs=203.9
Q ss_pred cCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCc-ccHHHHHHHHHHhhcCCCCccceeeeeeecCCccc
Q 035862 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL-QGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERG 150 (393)
Q Consensus 72 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 150 (393)
.+|++.+.||+|+||.||+|.+...+ .....+++|.+..... .....+.+|+.+++.++||||+++++++...+
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~--~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--- 78 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPG--KREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSK--- 78 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCC--CCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCC---
Confidence 46889999999999999999865332 2345689998865432 23456788999999999999999999987665
Q ss_pred ceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCC
Q 035862 151 IQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLA 230 (393)
Q Consensus 151 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a 230 (393)
..++||||+++++|.+++.... ..+++..++.++.|++.||.|||+. +++||||||+||+++.++.++|+|||++
T Consensus 79 -~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~---~i~h~dlkp~nili~~~~~~~l~dfg~~ 153 (267)
T cd05066 79 -PVMIVTEYMENGSLDAFLRKHD-GQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILVNSNLVCKVSDFGLS 153 (267)
T ss_pred -ccEEEEEcCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC---CEeehhhchhcEEECCCCeEEeCCCCcc
Confidence 4599999999999999986443 4578999999999999999999998 9999999999999999999999999999
Q ss_pred ccCCCCCCcc-ccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHh-CCCccCCCCchhhhHHHHHHhhcCcCCc
Q 035862 231 REGPTGDHTH-VSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILT-GRRVLERNRPTMEQKLLEWVKQFPADGK 308 (393)
Q Consensus 231 ~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 308 (393)
.......... ......++..|+|||.+.+..++.++|+||||+++|++++ |..||......... ...... .
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~~---~~~~~~----~ 226 (267)
T cd05066 154 RVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVI---KAIEEG----Y 226 (267)
T ss_pred cccccccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHHHH---HHHhCC----C
Confidence 8654322211 1122233567999999998899999999999999999886 99999765432211 111110 0
Q ss_pred ccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q 035862 309 KFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLA 358 (393)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~ 358 (393)
....+..++..+.+++.+||+.+|.+||++.++++.|..+
T Consensus 227 ----------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 227 ----------RLPAPMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKL 266 (267)
T ss_pred ----------cCCCCCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence 0011123457889999999999999999999999998764
No 215
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=2.7e-40 Score=299.49 Aligned_cols=260 Identities=26% Similarity=0.446 Sum_probs=203.2
Q ss_pred cCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCC-cccHHHHHHHHHHhhcCCCCccceeeeeeecCCccc
Q 035862 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG-LQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERG 150 (393)
Q Consensus 72 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 150 (393)
++|++.+.||+|+||.||+|.+...+. ....|++|.+.... ......+..|+.+++.++||||+++++++....
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~--~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~--- 78 (269)
T cd05065 4 SCVKIEEVIGAGEFGEVCRGRLKLPGK--REIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSR--- 78 (269)
T ss_pred HHeEEEeEecCCCCCeEEEEEEecCCC--CceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCC---
Confidence 358889999999999999998764332 34579999987542 234567889999999999999999999987665
Q ss_pred ceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCC
Q 035862 151 IQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLA 230 (393)
Q Consensus 151 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a 230 (393)
..++||||+.+++|.+++... ...+++..++.++.|++.||.|||++ |++|+||||+||+++.++.+||+|||++
T Consensus 79 -~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~~l~~al~~lH~~---g~~H~dl~p~nili~~~~~~kl~dfg~~ 153 (269)
T cd05065 79 -PVMIITEFMENGALDSFLRQN-DGQFTVIQLVGMLRGIAAGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSDFGLS 153 (269)
T ss_pred -ceEEEEecCCCCcHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccChheEEEcCCCcEEECCCccc
Confidence 459999999999999988543 34588999999999999999999998 9999999999999999999999999998
Q ss_pred ccCCCCCCcccccc-c--cccCCccCccccccCCCCchhhHHHHHHHHHHHHh-CCCccCCCCchhhhHHHHHHhhcCcC
Q 035862 231 REGPTGDHTHVSTA-V--VGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILT-GRRVLERNRPTMEQKLLEWVKQFPAD 306 (393)
Q Consensus 231 ~~~~~~~~~~~~~~-~--~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~ 306 (393)
.............. . ..+..|+|||.+.+..++.++|||||||++||+++ |..||....... ........
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~---~~~~i~~~--- 227 (269)
T cd05065 154 RFLEDDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQD---VINAIEQD--- 227 (269)
T ss_pred cccccCccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHH---HHHHHHcC---
Confidence 76433222111111 1 12357999999998999999999999999999886 999997654321 11211110
Q ss_pred CcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q 035862 307 GKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLA 358 (393)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~ 358 (393)
.....+..++..+.+++.+||..+|.+||++.+++..|+.+
T Consensus 228 -----------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 228 -----------YRLPPPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred -----------CcCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 00011123457789999999999999999999999988765
No 216
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5e-42 Score=316.82 Aligned_cols=247 Identities=33% Similarity=0.456 Sum_probs=201.1
Q ss_pred CcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCccc---HHHHHHHHHHhhcCCCCccceeeeeeecCCccc
Q 035862 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQG---HKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERG 150 (393)
Q Consensus 74 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 150 (393)
|.-++.||.|+||.||-|++..+. .+||||++...+.+. ...++.|+.+|++++|||++.+.|+|..+.
T Consensus 28 f~dLrEIGHGSFGAVYfArd~~n~-----evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~--- 99 (948)
T KOG0577|consen 28 FSDLREIGHGSFGAVYFARDVRNS-----EVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREH--- 99 (948)
T ss_pred HHHHHHhcCCccceeEEeeccCcc-----ceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccc---
Confidence 666678999999999999976544 479999998765544 355788999999999999999999998766
Q ss_pred ceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCC
Q 035862 151 IQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLA 230 (393)
Q Consensus 151 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a 230 (393)
..+|||||| -|+-.|++.- ..+++.+..+..|..+.+.||+|||+. +.||||||.+|||+++.|.|||+|||.|
T Consensus 100 -TaWLVMEYC-lGSAsDlleV-hkKplqEvEIAAi~~gaL~gLaYLHS~---~~IHRDiKAGNILLse~g~VKLaDFGSA 173 (948)
T KOG0577|consen 100 -TAWLVMEYC-LGSASDLLEV-HKKPLQEVEIAAITHGALQGLAYLHSH---NRIHRDIKAGNILLSEPGLVKLADFGSA 173 (948)
T ss_pred -hHHHHHHHH-hccHHHHHHH-HhccchHHHHHHHHHHHHHHHHHHHHh---hHHhhhccccceEecCCCeeeeccccch
Confidence 449999999 4588887643 345689999999999999999999998 9999999999999999999999999998
Q ss_pred ccCCCCCCccccccccccCCccCccccc---cCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcCC
Q 035862 231 REGPTGDHTHVSTAVVGTYGYAAPEYIE---TGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADG 307 (393)
Q Consensus 231 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 307 (393)
..... .++++|||.|||||++. .+.|+.++||||||++..||...++|+..-+. ...+.....+ .
T Consensus 174 si~~P------AnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNA--MSALYHIAQN----e 241 (948)
T KOG0577|consen 174 SIMAP------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA--MSALYHIAQN----E 241 (948)
T ss_pred hhcCc------hhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchH--HHHHHHHHhc----C
Confidence 76543 35689999999999885 57899999999999999999999999864321 1111111111 0
Q ss_pred cccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 035862 308 KKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLK 356 (393)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~ 356 (393)
.+.+ ...+.+..+.+|+..||++-|.+|||.+++++|..
T Consensus 242 -------sPtL---qs~eWS~~F~~Fvd~CLqKipqeRptse~ll~H~f 280 (948)
T KOG0577|consen 242 -------SPTL---QSNEWSDYFRNFVDSCLQKIPQERPTSEELLKHRF 280 (948)
T ss_pred -------CCCC---CCchhHHHHHHHHHHHHhhCcccCCcHHHHhhcch
Confidence 0111 13467899999999999999999999999999743
No 217
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=1e-40 Score=304.34 Aligned_cols=266 Identities=26% Similarity=0.334 Sum_probs=205.6
Q ss_pred HHHHHHHhcCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcccHHHHHHHHHHhhcC-CCCccceeeee
Q 035862 64 MQELREATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVV-SHPNLVKLLGY 142 (393)
Q Consensus 64 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~ 142 (393)
..++....+.|++.+.||.|+||.||+|.+...+ ..+++|...... .....+..|+.+++.+ +|+||++++++
T Consensus 8 ~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~-----~~~a~K~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~ 81 (282)
T cd06636 8 LSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTG-----QLAAIKVMDVTE-DEEEEIKLEINMLKKYSHHRNIATYYGA 81 (282)
T ss_pred hhhhcChhhhhhhheeeccCCCeEEEEEEEcCCC-----cEEEEEEEecCh-HHHHHHHHHHHHHHHhcCCCcEEEEeee
Confidence 3344455678999999999999999999975433 469999886543 2345677899999988 69999999998
Q ss_pred eecCCc--ccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCC
Q 035862 143 CSTEDE--RGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNF 220 (393)
Q Consensus 143 ~~~~~~--~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~ 220 (393)
+..... .....+++|||+.+++|.+++.......+++..++.++.|++.||.|||+. +++|+||+|+||++++++
T Consensus 82 ~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dl~~~nili~~~~ 158 (282)
T cd06636 82 FIKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAH---KVIHRDIKGQNVLLTENA 158 (282)
T ss_pred hhcccccCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCC
Confidence 864321 223679999999999999999765556688999999999999999999998 999999999999999999
Q ss_pred ceEEeeccCCccCCCCCCccccccccccCCccCccccc-----cCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhH
Q 035862 221 KPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIE-----TGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQK 295 (393)
Q Consensus 221 ~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~ 295 (393)
.++|+|||++........ ......|+..|+|||.+. ...++.++|||||||++|+|++|..||....+.....
T Consensus 159 ~~~l~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~ 236 (282)
T cd06636 159 EVKLVDFGVSAQLDRTVG--RRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALF 236 (282)
T ss_pred CEEEeeCcchhhhhcccc--CCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhh
Confidence 999999999875432211 123456889999999875 3568889999999999999999999997544322111
Q ss_pred HHHHHhhcCcCCcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 035862 296 LLEWVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLK 356 (393)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~ 356 (393)
. .... .........++.++.+||.+||+.||.+||++.+++++.|
T Consensus 237 ~--~~~~--------------~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~~~ 281 (282)
T cd06636 237 L--IPRN--------------PPPKLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLKHPF 281 (282)
T ss_pred h--HhhC--------------CCCCCcccccCHHHHHHHHHHhCCChhhCcCHHHHhcCCC
Confidence 1 0000 0000111135678999999999999999999999998764
No 218
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=2.6e-40 Score=298.45 Aligned_cols=245 Identities=23% Similarity=0.393 Sum_probs=189.8
Q ss_pred eecccCCceEEEEEEcCCCC-------CCCceEEEEEEecCCCcccHHHHHHHHHHhhcCCCCccceeeeeeecCCcccc
Q 035862 79 KIGEGGFGSVYKGTIRPLDG-------RGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGI 151 (393)
Q Consensus 79 ~lg~G~~g~Vy~~~~~~~~~-------~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 151 (393)
.||+|+||.||+|....... ......+++|.+..........+.+|+.+++.++||||+++++++.....
T Consensus 2 ~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~--- 78 (262)
T cd05077 2 HLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVE--- 78 (262)
T ss_pred ccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCC---
Confidence 58999999999998643221 12345688998876554555567889999999999999999999887663
Q ss_pred eEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCc-------eEE
Q 035862 152 QRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFK-------PKL 224 (393)
Q Consensus 152 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~-------~kl 224 (393)
.++||||+.+++|..++... ...+++..++.++.|++.||+|||+. +|+||||||+|||++.++. +++
T Consensus 79 -~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~~~~~~~~~l 153 (262)
T cd05077 79 -NIMVEEFVEFGPLDLFMHRK-SDVLTTPWKFKVAKQLASALSYLEDK---DLVHGNVCTKNILLAREGIDGECGPFIKL 153 (262)
T ss_pred -CEEEEecccCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHhhhC---CeECCCCCcccEEEecCCccCCCCceeEe
Confidence 48999999999999887543 34589999999999999999999998 9999999999999987664 899
Q ss_pred eeccCCccCCCCCCccccccccccCCccCccccc-cCCCCchhhHHHHHHHHHHHH-hCCCccCCCCchhhhHHHHHHhh
Q 035862 225 SDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIE-TGHLKSQSDIWSFGVVLYEIL-TGRRVLERNRPTMEQKLLEWVKQ 302 (393)
Q Consensus 225 ~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwslGvil~ell-tg~~pf~~~~~~~~~~~~~~~~~ 302 (393)
+|||++...... ....++..|+|||++. +..++.++|||||||++|+|+ +|..||..........+.. ..
T Consensus 154 ~d~g~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~--~~ 225 (262)
T cd05077 154 SDPGIPITVLSR------QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEKERFYE--GQ 225 (262)
T ss_pred CCCCCCccccCc------ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHHHHHHh--cC
Confidence 999998654221 2346788899999886 467899999999999999998 5888876543221111100 00
Q ss_pred cCcCCcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 035862 303 FPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLK 356 (393)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~ 356 (393)
. . .....+.++.+|+.+||+.||.+||++.+++++++
T Consensus 226 ~---------------~--~~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~~ 262 (262)
T cd05077 226 C---------------M--LVTPSCKELADLMTHCMNYDPNQRPFFRAIMRDIN 262 (262)
T ss_pred c---------------c--CCCCChHHHHHHHHHHcCCChhhCcCHHHHHHhcC
Confidence 0 0 00112467899999999999999999999998763
No 219
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=8.2e-41 Score=308.51 Aligned_cols=265 Identities=31% Similarity=0.475 Sum_probs=217.7
Q ss_pred hcCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCccc-HHHHHHHHHHhhcCCCCccceeeeeeecCCcc
Q 035862 71 TNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQG-HKQWLAEVQFLGVVSHPNLVKLLGYCSTEDER 149 (393)
Q Consensus 71 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 149 (393)
.....+.++||+|-||.|.++.... ...||+|.++...... +..|.+|+++|.+++||||+.++|+|..++..
T Consensus 537 Rs~L~~~ekiGeGqFGEVhLCeveg------~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePi 610 (807)
T KOG1094|consen 537 RSRLRFKEKIGEGQFGEVHLCEVEG------PLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPL 610 (807)
T ss_pred hhheehhhhhcCcccceeEEEEecC------ceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCch
Confidence 4567888999999999999997532 5679999999875544 47899999999999999999999999999865
Q ss_pred cceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccC
Q 035862 150 GIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGL 229 (393)
Q Consensus 150 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~ 229 (393)
++|+||++.|+|..+|.....+.+.-.....|+.||++||+||.+- ++|||||.+.|+|++.++++||+|||+
T Consensus 611 ----cmI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~---nfVHrd~a~rNcLv~~e~~iKiadfgm 683 (807)
T KOG1094|consen 611 ----CMITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESL---NFVHRDLATRNCLVDGEFTIKIADFGM 683 (807)
T ss_pred ----HHHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhh---chhhccccccceeecCcccEEecCccc
Confidence 9999999999999999776656556666778999999999999998 999999999999999999999999999
Q ss_pred CccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHh--CCCccCCCCchhhhHHHHHHhhcCcCC
Q 035862 230 AREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILT--GRRVLERNRPTMEQKLLEWVKQFPADG 307 (393)
Q Consensus 230 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ellt--g~~pf~~~~~~~~~~~~~~~~~~~~~~ 307 (393)
++.+..++........+-...|||+|.+..++++.++|+|+||+++||+++ ...||..... ++.......-++..+
T Consensus 684 sR~lysg~yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~--e~vven~~~~~~~~~ 761 (807)
T KOG1094|consen 684 SRNLYSGDYYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTD--EQVVENAGEFFRDQG 761 (807)
T ss_pred ccccccCCceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhH--HHHHHhhhhhcCCCC
Confidence 998888888877777888899999999999999999999999999999776 5677764332 221111111111111
Q ss_pred cccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q 035862 308 KKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLA 358 (393)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~ 358 (393)
. ......+..++..+++++..||+.+-++||+++++-.+|...
T Consensus 762 ~--------~~~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~ 804 (807)
T KOG1094|consen 762 R--------QVVLSRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQED 804 (807)
T ss_pred c--------ceeccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence 1 111223345778999999999999999999999999988764
No 220
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=2.7e-40 Score=297.14 Aligned_cols=253 Identities=24% Similarity=0.377 Sum_probs=204.3
Q ss_pred CCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCC--cccHHHHHHHHHHhhcCCCCccceeeeeeecCCccc
Q 035862 73 GFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG--LQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERG 150 (393)
Q Consensus 73 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 150 (393)
+|+..+.||.|+||.||.+....+ +..+++|.+.... ......+.+|+.+++.++|+||+++++++...+
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~-----~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~--- 72 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTED-----DSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDN--- 72 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCC-----CcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCC---
Confidence 488999999999999999986533 3458999876432 234456789999999999999999999998765
Q ss_pred ceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCC
Q 035862 151 IQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLA 230 (393)
Q Consensus 151 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a 230 (393)
.++++|||+++++|.+++.......+++..+..++.|++.||.|||+. +++|+||+|+||++++++.+||+|||++
T Consensus 73 -~~~~~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~ni~~~~~~~~kl~d~~~~ 148 (256)
T cd08221 73 -TLLIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKA---GILHRDIKTLNIFLTKAGLIKLGDFGIS 148 (256)
T ss_pred -eEEEEEEecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChHhEEEeCCCCEEECcCcce
Confidence 569999999999999999765556789999999999999999999998 9999999999999999999999999998
Q ss_pred ccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcCCccc
Q 035862 231 REGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKF 310 (393)
Q Consensus 231 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (393)
........ ......+++.|+|||.+.+..++.++|+||||+++|+|++|..||.......... .....
T Consensus 149 ~~~~~~~~--~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~--~~~~~-------- 216 (256)
T cd08221 149 KILGSEYS--MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLNLVV--KIVQG-------- 216 (256)
T ss_pred EEcccccc--cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHHHHH--HHHcC--------
Confidence 76533221 2234578999999999988889999999999999999999999997644321111 11100
Q ss_pred ccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 035862 311 SMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLK 356 (393)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~ 356 (393)
.. ...+..++.++.+++.+||+.+|.+||++.+++++++
T Consensus 217 ------~~-~~~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~~ 255 (256)
T cd08221 217 ------NY-TPVVSVYSSELISLVHSLLQQDPEKRPTADEVLDQPL 255 (256)
T ss_pred ------CC-CCCccccCHHHHHHHHHHcccCcccCCCHHHHhhCcC
Confidence 00 0111235678999999999999999999999998764
No 221
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=2.9e-40 Score=300.23 Aligned_cols=261 Identities=23% Similarity=0.431 Sum_probs=206.7
Q ss_pred cCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcc-cHHHHHHHHHHhhcCCCCccceeeeeeecCCccc
Q 035862 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQ-GHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERG 150 (393)
Q Consensus 72 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 150 (393)
.+|++...||.|+||.||+|+............+++|.+...... ....+.+|+.+++.++|+||+++++++...+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--- 81 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAE--- 81 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCC---
Confidence 468899999999999999999876655666778999998765433 3567889999999999999999999987765
Q ss_pred ceEEEEEeecCCCChHHHHhhcCC-------CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceE
Q 035862 151 IQRLLVYEYMPNRSLEDRLFSRAQ-------PTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPK 223 (393)
Q Consensus 151 ~~~~lv~e~~~~~~L~~~l~~~~~-------~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~k 223 (393)
..++||||+++++|.+++..... ..+++..+..++.|++.||.|||++ +++||||||+||+++.++.++
T Consensus 82 -~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~ 157 (275)
T cd05046 82 -PHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNA---RFVHRDLAARNCLVSSQREVK 157 (275)
T ss_pred -cceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhc---CcccCcCccceEEEeCCCcEE
Confidence 45999999999999999864431 2589999999999999999999998 999999999999999999999
Q ss_pred EeeccCCccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHh-CCCccCCCCchhhhHHHHHHhh
Q 035862 224 LSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILT-GRRVLERNRPTMEQKLLEWVKQ 302 (393)
Q Consensus 224 l~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~ 302 (393)
++|||++......... ......++..|+|||.+.+..++.++||||||+++|+|++ |..||...... ........
T Consensus 158 l~~~~~~~~~~~~~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~---~~~~~~~~ 233 (275)
T cd05046 158 VSLLSLSKDVYNSEYY-KLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDE---EVLNRLQA 233 (275)
T ss_pred EcccccccccCccccc-ccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchH---HHHHHHHc
Confidence 9999998654322111 2223456778999999988889999999999999999999 78888643321 11111111
Q ss_pred cCcCCcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 035862 303 FPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLK 356 (393)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~ 356 (393)
.. .....+..++..+.+++.+||+.+|.+||++.+++..|+
T Consensus 234 ~~-------------~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~ 274 (275)
T cd05046 234 GK-------------LELPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG 274 (275)
T ss_pred CC-------------cCCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence 00 000111234578999999999999999999999999875
No 222
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=1.9e-40 Score=302.67 Aligned_cols=256 Identities=24% Similarity=0.395 Sum_probs=202.8
Q ss_pred CcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcccHHHHHHHHHHhhcCCCCccceeeeeeecCCcccceE
Q 035862 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQR 153 (393)
Q Consensus 74 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 153 (393)
|++.+.||.|+||.||+|.+.. .+..+++|.+..........+.+|+.+++.++||||+++++++...+ ..
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~-----~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~----~~ 77 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKE-----TGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYEN----NL 77 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECC-----CCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCC----EE
Confidence 6778899999999999998653 33468999887655455667888999999999999999999988765 56
Q ss_pred EEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCCccC
Q 035862 154 LLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREG 233 (393)
Q Consensus 154 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~ 233 (393)
++||||+.+++|..++... ...+++..+..++.|++.||.|||+. |++||||||+||+++.++.+||+|||++...
T Consensus 78 ~~v~e~~~~~~l~~~~~~~-~~~l~~~~~~~~~~qi~~~L~~LH~~---~i~H~dlkp~nili~~~~~~kl~dfg~~~~~ 153 (282)
T cd06643 78 WILIEFCAGGAVDAVMLEL-ERPLTEPQIRVVCKQTLEALNYLHEN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKN 153 (282)
T ss_pred EEEEEecCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEccCCCEEEccccccccc
Confidence 9999999999999887542 34689999999999999999999998 9999999999999999999999999998754
Q ss_pred CCCCCccccccccccCCccCccccc-----cCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcCCc
Q 035862 234 PTGDHTHVSTAVVGTYGYAAPEYIE-----TGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGK 308 (393)
Q Consensus 234 ~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 308 (393)
.... .......++..|+|||++. +..++.++|||||||++|+|++|.+||....+.. .........+.
T Consensus 154 ~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~--~~~~~~~~~~~--- 226 (282)
T cd06643 154 TRTI--QRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMR--VLLKIAKSEPP--- 226 (282)
T ss_pred cccc--cccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHH--HHHHHhhcCCC---
Confidence 3221 1223457889999999884 4567889999999999999999999997654321 11111111000
Q ss_pred ccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHH
Q 035862 309 KFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAV 359 (393)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~~ 359 (393)
....+..++.++.+|+.+||+.||.+||++.+++++.+...
T Consensus 227 ----------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~ 267 (282)
T cd06643 227 ----------TLAQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQHPFVTV 267 (282)
T ss_pred ----------CCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCCCEec
Confidence 00111234578999999999999999999999999987544
No 223
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=2.1e-40 Score=299.73 Aligned_cols=253 Identities=23% Similarity=0.379 Sum_probs=199.6
Q ss_pred CCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCccc---------HHHHHHHHHHhhcCCCCccceeeeee
Q 035862 73 GFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQG---------HKQWLAEVQFLGVVSHPNLVKLLGYC 143 (393)
Q Consensus 73 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~---------~~~~~~E~~~l~~l~h~niv~~~~~~ 143 (393)
+|.+...||.|++|.||+|.+... +..+++|.+....... ...+.+|+.+++.++||||+++++++
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~-----~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~ 75 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASS-----GELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSS 75 (267)
T ss_pred CccccceeecCCCeEEEEEEecCC-----CcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEE
Confidence 477888999999999999986533 3459999886543221 24567899999999999999999998
Q ss_pred ecCCcccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceE
Q 035862 144 STEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPK 223 (393)
Q Consensus 144 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~k 223 (393)
...+ ..++||||+.+++|.+++.. ...+++..+..++.|++.||.|||+. +++||||+|+||++++++.++
T Consensus 76 ~~~~----~~~lv~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~~l~~~l~~lH~~---~ivH~di~p~nil~~~~~~~~ 146 (267)
T cd06628 76 LDAD----HLNIFLEYVPGGSVAALLNN--YGAFEETLVRNFVRQILKGLNYLHNR---GIIHRDIKGANILVDNKGGIK 146 (267)
T ss_pred EeCC----ccEEEEEecCCCCHHHHHHh--ccCccHHHHHHHHHHHHHHHHHHHhc---CcccccCCHHHEEEcCCCCEE
Confidence 8766 45999999999999999943 35688899999999999999999998 999999999999999999999
Q ss_pred EeeccCCccCCCCCCc----cccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHH
Q 035862 224 LSDFGLAREGPTGDHT----HVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEW 299 (393)
Q Consensus 224 l~Dfg~a~~~~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~ 299 (393)
|+|||++......... .......|+..|+|||.+.+..++.++|+|||||++|+|++|..||....... .....
T Consensus 147 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~--~~~~~ 224 (267)
T cd06628 147 ISDFGISKKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQ--AIFKI 224 (267)
T ss_pred ecccCCCcccccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHH--HHHHH
Confidence 9999998765421111 11123457889999999998889999999999999999999999997543211 11111
Q ss_pred HhhcCcCCcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 035862 300 VKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLK 356 (393)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~ 356 (393)
.. ......+...+..+.+++.+||+.||.+||++.+++++.+
T Consensus 225 ~~---------------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~ 266 (267)
T cd06628 225 GE---------------NASPEIPSNISSEAIDFLEKTFEIDHNKRPTAAELLKHPF 266 (267)
T ss_pred hc---------------cCCCcCCcccCHHHHHHHHHHccCCchhCcCHHHHhhCCC
Confidence 00 0011122245678999999999999999999999998743
No 224
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=5.4e-40 Score=295.41 Aligned_cols=253 Identities=29% Similarity=0.473 Sum_probs=201.2
Q ss_pred ceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCc-ccHHHHHHHHHHhhcCCCCccceeeeeeecCCcccceEEEE
Q 035862 78 LKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL-QGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLV 156 (393)
Q Consensus 78 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv 156 (393)
+.||+|++|.||+|.+... .+....|++|.+..... ...+.+.+|+.+++.++||||+++++++.. . ..++|
T Consensus 1 ~~ig~g~~~~v~~~~~~~~--~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~----~~~~v 73 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTS--GGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-H----PLMMV 73 (257)
T ss_pred CcCCccCcccEEeeeEecC--CCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-C----eEEEE
Confidence 3689999999999987532 33445699999987665 456678899999999999999999999876 3 56999
Q ss_pred EeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCCccCCCC
Q 035862 157 YEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTG 236 (393)
Q Consensus 157 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~ 236 (393)
|||+++++|.+++.......+++..++.++.|++.||.|||++ +++|+||+|+||+++.++.+||+|||++......
T Consensus 74 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~ 150 (257)
T cd05040 74 TELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESK---RFIHRDLAARNILLASDDKVKIGDFGLMRALPQN 150 (257)
T ss_pred EEecCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhC---CccccccCcccEEEecCCEEEecccccccccccc
Confidence 9999999999999665435689999999999999999999998 9999999999999999999999999999865442
Q ss_pred CCc-cccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHh-CCCccCCCCchhhhHHHHHHhhcCcCCccccccc
Q 035862 237 DHT-HVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILT-GRRVLERNRPTMEQKLLEWVKQFPADGKKFSMMI 314 (393)
Q Consensus 237 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (393)
... .......++..|+|||.+.+..++.++|||||||++|+|++ |..||.......... . ... ....
T Consensus 151 ~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~--~-~~~---~~~~----- 219 (257)
T cd05040 151 EDHYVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILK--K-IDK---EGER----- 219 (257)
T ss_pred ccceecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHH--H-HHh---cCCc-----
Confidence 221 11223456788999999998899999999999999999998 999996543322111 1 110 0000
Q ss_pred CcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 035862 315 DPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLK 356 (393)
Q Consensus 315 ~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~ 356 (393)
...+...+..+.+++.+||+.+|++||++.++++.|.
T Consensus 220 -----~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 220 -----LERPEACPQDIYNVMLQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred -----CCCCccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence 0011134578999999999999999999999998874
No 225
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=1.2e-40 Score=299.79 Aligned_cols=253 Identities=30% Similarity=0.512 Sum_probs=198.0
Q ss_pred ceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCc-ccHHHHHHHHHHhhcCCCCccceeeeeeecCCcccceEEEE
Q 035862 78 LKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL-QGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLV 156 (393)
Q Consensus 78 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv 156 (393)
++||+|+||.||+|.+...+ +....+++|.+..... .....+.+|+.+++.+.||||+++++++... ..++|
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~--~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~-----~~~~v 73 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKS--GKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCKGE-----PLMLV 73 (257)
T ss_pred CccCccCceeEEEeEeeccC--CCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEcCC-----ceEEE
Confidence 36999999999999865433 2345799999876543 2445688899999999999999999987533 34899
Q ss_pred EeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCCccCCCC
Q 035862 157 YEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTG 236 (393)
Q Consensus 157 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~ 236 (393)
|||+.+++|.+++... ..+++..++.++.|++.||.|||.. +++|+||||+|||++.++.+||+|||++......
T Consensus 74 ~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~ 148 (257)
T cd05060 74 MELAPLGPLLKYLKKR--REIPVSDLKELAHQVAMGMAYLESK---HFVHRDLAARNVLLVNRHQAKISDFGMSRALGAG 148 (257)
T ss_pred EEeCCCCcHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHhhc---CeeccCcccceEEEcCCCcEEeccccccceeecC
Confidence 9999999999999544 3689999999999999999999998 9999999999999999999999999999865433
Q ss_pred CCcc-ccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHh-CCCccCCCCchhhhHHHHHHhhcCcCCccccccc
Q 035862 237 DHTH-VSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILT-GRRVLERNRPTMEQKLLEWVKQFPADGKKFSMMI 314 (393)
Q Consensus 237 ~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (393)
.... ......++..|+|||.+.+..++.++||||||+++|+|++ |..||...... .+........
T Consensus 149 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~---~~~~~~~~~~---------- 215 (257)
T cd05060 149 SDYYRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGA---EVIAMLESGE---------- 215 (257)
T ss_pred CcccccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHH---HHHHHHHcCC----------
Confidence 2211 1111223467999999998899999999999999999998 99999754332 1222111110
Q ss_pred CcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHH
Q 035862 315 DPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAV 359 (393)
Q Consensus 315 ~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~~ 359 (393)
....+..++..+.+++.+||..+|++||++.++++.|....
T Consensus 216 ----~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~~ 256 (257)
T cd05060 216 ----RLPRPEECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRDP 256 (257)
T ss_pred ----cCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhcc
Confidence 01112234578899999999999999999999999998653
No 226
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=1.2e-40 Score=303.56 Aligned_cols=258 Identities=24% Similarity=0.391 Sum_probs=205.3
Q ss_pred hcCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcccHHHHHHHHHHhhcCCCCccceeeeeeecCCccc
Q 035862 71 TNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERG 150 (393)
Q Consensus 71 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 150 (393)
.++|++.+.||.|+||.||+|.+..+ +..+++|.+..........+.+|+++++.++||||+++++.+....
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~-----~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--- 75 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKET-----GLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYEN--- 75 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCC-----CcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCC---
Confidence 35699999999999999999987533 3469999987665555667889999999999999999999998765
Q ss_pred ceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCC
Q 035862 151 IQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLA 230 (393)
Q Consensus 151 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a 230 (393)
..++||||+.+++|.+++... ...+++..++.++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||++
T Consensus 76 -~~~lv~e~~~~~~L~~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~nili~~~~~~~l~d~g~~ 150 (280)
T cd06611 76 -KLWILIEFCDGGALDSIMLEL-ERGLTEPQIRYVCRQMLEALNFLHSH---KVIHRDLKAGNILLTLDGDVKLADFGVS 150 (280)
T ss_pred -eEEEEeeccCCCcHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEECCCCCEEEccCccc
Confidence 569999999999999988543 34589999999999999999999999 9999999999999999999999999988
Q ss_pred ccCCCCCCccccccccccCCccCccccc-----cCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCc
Q 035862 231 REGPTGDHTHVSTAVVGTYGYAAPEYIE-----TGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPA 305 (393)
Q Consensus 231 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~ 305 (393)
........ ......+++.|+|||.+. ...++.++|+||||+++|+|++|..||....... ......... .
T Consensus 151 ~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~--~~~~~~~~~-~ 225 (280)
T cd06611 151 AKNKSTLQ--KRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMR--VLLKILKSE-P 225 (280)
T ss_pred hhhccccc--ccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHH--HHHHHhcCC-C
Confidence 65432211 223456889999999874 3457789999999999999999999997653321 111111100 0
Q ss_pred CCcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q 035862 306 DGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLA 358 (393)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~ 358 (393)
+ ....+..++.++.+++.+||+.+|.+||++.+++++.|..
T Consensus 226 ----------~--~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~ 266 (280)
T cd06611 226 ----------P--TLDQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKHPFVS 266 (280)
T ss_pred ----------C--CcCCcccCCHHHHHHHHHHhccChhhCcCHHHHhcChhhc
Confidence 0 0011223457889999999999999999999999998764
No 227
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=1.5e-40 Score=308.41 Aligned_cols=259 Identities=25% Similarity=0.349 Sum_probs=206.3
Q ss_pred cCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcc---cHHHHHHHHHHhhcCCCCccceeeeeeecCCc
Q 035862 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQ---GHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDE 148 (393)
Q Consensus 72 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 148 (393)
++|+..+.||+|++|.||+|....+ +..+++|.+...... ....+.+|+++++.++||||+++++.+....
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~-----~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~- 74 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGT-----GKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTET- 74 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCC-----CcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCC-
Confidence 3688999999999999999987543 346999998765332 3456788999999999999999999987665
Q ss_pred ccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeecc
Q 035862 149 RGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFG 228 (393)
Q Consensus 149 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg 228 (393)
..++||||+.+++|.+++.......+++..++.++.|++.||+|||+. +++|+||||+||+++.++.++|+|||
T Consensus 75 ---~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg 148 (316)
T cd05574 75 ---YLCLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLL---GIVYRDLKPENILLHESGHIMLSDFD 148 (316)
T ss_pred ---EEEEEEEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChHHeEEcCCCCEEEeecc
Confidence 569999999999999998765556789999999999999999999998 99999999999999999999999999
Q ss_pred CCccCCCCCCc---------------------------cccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhC
Q 035862 229 LAREGPTGDHT---------------------------HVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTG 281 (393)
Q Consensus 229 ~a~~~~~~~~~---------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg 281 (393)
++......... .......|+..|+|||++.+..++.++||||||+++|+|++|
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g 228 (316)
T cd05574 149 LSKQSDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYG 228 (316)
T ss_pred hhhcccccccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhC
Confidence 98754322110 011234688899999999988899999999999999999999
Q ss_pred CCccCCCCchhhhHHHHHHhhcCcCCcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCC----HHHHHHHHHH
Q 035862 282 RRVLERNRPTMEQKLLEWVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPT----MNQVVESLKL 357 (393)
Q Consensus 282 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps----~~~~l~~l~~ 357 (393)
..||........ +...... ..........+..+.+++.+||..||++||+ +.+++.|.|.
T Consensus 229 ~~pf~~~~~~~~--~~~~~~~--------------~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~~~~ 292 (316)
T cd05574 229 TTPFKGSNRDET--FSNILKK--------------EVTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQHPFF 292 (316)
T ss_pred CCCCCCCchHHH--HHHHhcC--------------CccCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcCchh
Confidence 999975543211 1111100 0000011125688999999999999999999 9999998766
Q ss_pred H
Q 035862 358 A 358 (393)
Q Consensus 358 ~ 358 (393)
.
T Consensus 293 ~ 293 (316)
T cd05574 293 R 293 (316)
T ss_pred h
Confidence 4
No 228
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=6.7e-40 Score=295.62 Aligned_cols=257 Identities=29% Similarity=0.460 Sum_probs=194.8
Q ss_pred ceecccCCceEEEEEEcCCCCCCCceEEEEEEecCC-CcccHHHHHHHHHHhhcCCCCccceeeeeeecCCcccceEEEE
Q 035862 78 LKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNH-GLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLV 156 (393)
Q Consensus 78 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv 156 (393)
+.||+|+||.||+|.+... ......+|+|.+... .......+.+|+.+++.++||||+++++++...+. ..+++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~--~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~---~~~lv 75 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDS--DGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEG---SPLVV 75 (262)
T ss_pred CcccccCCceEEEEEEecC--CCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCC---CcEEE
Confidence 3689999999999986532 234567999988543 22345677889999999999999999997764432 34899
Q ss_pred EeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCCccCCCC
Q 035862 157 YEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTG 236 (393)
Q Consensus 157 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~ 236 (393)
|||+.+++|.+++.... ...++..+..++.|++.||.|||+. +++||||||+|||+++++.+||+|||++......
T Consensus 76 ~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~ 151 (262)
T cd05058 76 LPYMKHGDLRNFIRSET-HNPTVKDLIGFGLQVAKGMEYLASK---KFVHRDLAARNCMLDESFTVKVADFGLARDIYDK 151 (262)
T ss_pred EecCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCccccccccCC
Confidence 99999999999985433 3456777888999999999999998 9999999999999999999999999998754322
Q ss_pred CCcc--ccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhC-CCccCCCCchhhhHHHHHHhhcCcCCcccccc
Q 035862 237 DHTH--VSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTG-RRVLERNRPTMEQKLLEWVKQFPADGKKFSMM 313 (393)
Q Consensus 237 ~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (393)
.... ......++..|+|||.+.+..++.++|||||||++|||++| .+||....... ....... +..
T Consensus 152 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~---~~~~~~~----~~~---- 220 (262)
T cd05058 152 EYYSVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFD---ITVYLLQ----GRR---- 220 (262)
T ss_pred cceeecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHH---HHHHHhc----CCC----
Confidence 1111 11233456789999999888999999999999999999995 55665432211 1111110 000
Q ss_pred cCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHh
Q 035862 314 IDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQ 360 (393)
Q Consensus 314 ~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~~~ 360 (393)
...+...+..+.+++.+||..+|++||++.++++.++.+..
T Consensus 221 ------~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~~ 261 (262)
T cd05058 221 ------LLQPEYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQIFS 261 (262)
T ss_pred ------CCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHhc
Confidence 00111235678999999999999999999999999998764
No 229
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=9.6e-40 Score=295.89 Aligned_cols=255 Identities=27% Similarity=0.389 Sum_probs=190.1
Q ss_pred eecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCc-ccHHHHHHHHHHhhcCCCCccceeeeeeecCCcccceEEEEE
Q 035862 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL-QGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVY 157 (393)
Q Consensus 79 ~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv~ 157 (393)
.||+|+||.||+|.+.. ......+++|.+..... .....+.+|+.+++.++||||+++++++.... ..++||
T Consensus 2 ~lg~G~~g~Vy~~~~~~---~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~----~~~lv~ 74 (269)
T cd05087 2 EIGNGWFGKVILGEVNS---GYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVT----PYLLVM 74 (269)
T ss_pred cccccCCceEEEEEEcC---CCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCC----CcEEEE
Confidence 59999999999998642 22345689998875432 23346788999999999999999999987765 348999
Q ss_pred eecCCCChHHHHhhcC---CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCCccCC
Q 035862 158 EYMPNRSLEDRLFSRA---QPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGP 234 (393)
Q Consensus 158 e~~~~~~L~~~l~~~~---~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~ 234 (393)
||+++++|.+++.... ....++..+..++.|++.||.|||+. +++|+||||+||+++.++.+||+|||++....
T Consensus 75 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~ 151 (269)
T cd05087 75 EFCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKN---NFIHSDLALRNCLLTADLTVKIGDYGLSHNKY 151 (269)
T ss_pred ECCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEECCcccccccc
Confidence 9999999999996432 22456777888999999999999998 99999999999999999999999999987543
Q ss_pred CCCCccccccccccCCccCccccccC-------CCCchhhHHHHHHHHHHHHh-CCCccCCCCchhhhHHHHHHhhcCcC
Q 035862 235 TGDHTHVSTAVVGTYGYAAPEYIETG-------HLKSQSDIWSFGVVLYEILT-GRRVLERNRPTMEQKLLEWVKQFPAD 306 (393)
Q Consensus 235 ~~~~~~~~~~~~gt~~y~aPE~~~~~-------~~~~~~DiwslGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~ 306 (393)
............++..|+|||++.+. .++.++||||||+++|||++ |..||........... .....
T Consensus 152 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~--~~~~~--- 226 (269)
T cd05087 152 KEDYYVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTY--TVREQ--- 226 (269)
T ss_pred CcceeecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHH--Hhhcc---
Confidence 32222222334677889999988542 35789999999999999996 9999976543221111 01000
Q ss_pred CcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 035862 307 GKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLK 356 (393)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~ 356 (393)
.. ....+.. ....+..+.+++..|| .+|++|||+.+|...|.
T Consensus 227 ~~---~~~~~~~----~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 227 QL---KLPKPRL----KLPLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred cC---CCCCCcc----CCCCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 00 0011111 1123466888999999 68999999999998763
No 230
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=2.3e-40 Score=300.77 Aligned_cols=254 Identities=28% Similarity=0.364 Sum_probs=204.8
Q ss_pred cCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCC-cccHHHHHHHHHHhhcCCCCccceeeeeeecCCccc
Q 035862 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG-LQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERG 150 (393)
Q Consensus 72 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 150 (393)
++|++.+.||.|++|.||+|.+..+ +..+++|.+.... ......+.+|+.+++.++|+||+++++++....
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~-----~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--- 72 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRT-----NQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGS--- 72 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCC-----CeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECC---
Confidence 4688899999999999999987543 3469999987543 233456778999999999999999999988765
Q ss_pred ceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCC
Q 035862 151 IQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLA 230 (393)
Q Consensus 151 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a 230 (393)
.+++|+||+.+++|.+++... .+++..++.++.|++.||.|||+. +++|+||+|+||++++++.++|+|||++
T Consensus 73 -~~~~v~e~~~~~~L~~~~~~~---~~~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~ 145 (274)
T cd06609 73 -KLWIIMEYCGGGSCLDLLKPG---KLDETYIAFILREVLLGLEYLHEE---GKIHRDIKAANILLSEEGDVKLADFGVS 145 (274)
T ss_pred -eEEEEEEeeCCCcHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEcccccc
Confidence 669999999999999998532 689999999999999999999998 9999999999999999999999999999
Q ss_pred ccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcCCccc
Q 035862 231 REGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKF 310 (393)
Q Consensus 231 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (393)
....... .......++..|+|||.+.+..++.++||||||+++|+|++|..||....+..... .....
T Consensus 146 ~~~~~~~--~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~--~~~~~-------- 213 (274)
T cd06609 146 GQLTSTM--SKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLF--LIPKN-------- 213 (274)
T ss_pred eeecccc--cccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHHHH--Hhhhc--------
Confidence 7654332 12234568889999999998889999999999999999999999997544221110 00000
Q ss_pred ccccCcccccccCHH-HHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHH
Q 035862 311 SMMIDPRLRNQYSIN-AARRVAKLADNCLKKNPEERPTMNQVVESLKLAV 359 (393)
Q Consensus 311 ~~~~~~~~~~~~~~~-~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~~ 359 (393)
........ ++.++.+++.+||..+|++||++++++++.+...
T Consensus 214 -------~~~~~~~~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~~~~~~~ 256 (274)
T cd06609 214 -------NPPSLEGNKFSKPFKDFVSLCLNKDPKERPSAKELLKHKFIKK 256 (274)
T ss_pred -------CCCCCcccccCHHHHHHHHHHhhCChhhCcCHHHHhhChhhcC
Confidence 00011111 4577899999999999999999999999987754
No 231
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=3.1e-40 Score=301.65 Aligned_cols=269 Identities=26% Similarity=0.385 Sum_probs=201.1
Q ss_pred cCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCC--cccHHHHHHHHHHhhcCCCCccceeeeeeecCCcc
Q 035862 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG--LQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDER 149 (393)
Q Consensus 72 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 149 (393)
++|++...||+|+||.||+|.+... +..|++|.+.... ....+.+.+|+.+++.++|||++++++++....
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~-----~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~-- 73 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRET-----GQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKR-- 73 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCC-----CcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCC--
Confidence 4689999999999999999987533 3469999876432 223355778999999999999999999998765
Q ss_pred cceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccC
Q 035862 150 GIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGL 229 (393)
Q Consensus 150 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~ 229 (393)
..++||||+++++|..++. ....+++..++.++.|++.||.|||+. +++||||||+||+++.++.++|+|||+
T Consensus 74 --~~~~v~e~~~~~~l~~~~~--~~~~~~~~~~~~~~~ql~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~ 146 (286)
T cd07847 74 --KLHLVFEYCDHTVLNELEK--NPRGVPEHLIKKIIWQTLQAVNFCHKH---NCIHRDVKPENILITKQGQIKLCDFGF 146 (286)
T ss_pred --EEEEEEeccCccHHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCChhhEEEcCCCcEEECcccc
Confidence 5699999999988887763 334689999999999999999999998 999999999999999999999999999
Q ss_pred CccCCCCCCccccccccccCCccCcccccc-CCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHH-Hhhc-C--
Q 035862 230 AREGPTGDHTHVSTAVVGTYGYAAPEYIET-GHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEW-VKQF-P-- 304 (393)
Q Consensus 230 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~-~~~~-~-- 304 (393)
+........ ......++..|+|||.+.+ ..++.++||||||+++|+|++|..||.............. .... +
T Consensus 147 ~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 224 (286)
T cd07847 147 ARILTGPGD--DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRH 224 (286)
T ss_pred ceecCCCcc--cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHH
Confidence 986544321 1223457889999999876 5678999999999999999999999986554322111110 0000 0
Q ss_pred ----cCCcccccccCccccc-----ccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 035862 305 ----ADGKKFSMMIDPRLRN-----QYSINAARRVAKLADNCLKKNPEERPTMNQVVESLK 356 (393)
Q Consensus 305 ----~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~ 356 (393)
...........+.... ......+..+.+|+.+||+.+|++||++.+++.|.+
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~~~ 285 (286)
T cd07847 225 QQIFSTNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEHPY 285 (286)
T ss_pred hhhcccccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcCCC
Confidence 0000000000000000 001134678899999999999999999999998754
No 232
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=2.1e-40 Score=297.74 Aligned_cols=253 Identities=28% Similarity=0.405 Sum_probs=204.3
Q ss_pred cCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcccHHHHHHHHHHhhcCCCCccceeeeeeecCCcccc
Q 035862 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGI 151 (393)
Q Consensus 72 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 151 (393)
++|+..+.||.|+||.||+|..... +..+++|.+..... ...+.+|+++++.++||||+++++++....
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~-----~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~---- 71 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKET-----GQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYFKNT---- 71 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCC-----CcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeeecCC----
Confidence 5799999999999999999997543 34689998875432 567889999999999999999999998775
Q ss_pred eEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCCc
Q 035862 152 QRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAR 231 (393)
Q Consensus 152 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~ 231 (393)
..++++||+.+++|.+++... ...+++..++.++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||++.
T Consensus 72 ~~~l~~e~~~~~~L~~~l~~~-~~~l~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~ni~~~~~~~~~l~dfg~~~ 147 (256)
T cd06612 72 DLWIVMEYCGAGSVSDIMKIT-NKTLTEEEIAAILYQTLKGLEYLHSN---KKIHRDIKAGNILLNEEGQAKLADFGVSG 147 (256)
T ss_pred cEEEEEecCCCCcHHHHHHhC-ccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEECCCCcEEEcccccch
Confidence 569999999999999998543 35689999999999999999999998 99999999999999999999999999987
Q ss_pred cCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcCCcccc
Q 035862 232 EGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKFS 311 (393)
Q Consensus 232 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (393)
....... ......++..|+|||.+.+..++.++||||||+++|+|++|+.||....+....... . ..
T Consensus 148 ~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~--~-~~-------- 214 (256)
T cd06612 148 QLTDTMA--KRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMI--P-NK-------- 214 (256)
T ss_pred hcccCcc--ccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhh--c-cC--------
Confidence 6543321 223345788999999999889999999999999999999999999754332211100 0 00
Q ss_pred cccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 035862 312 MMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLK 356 (393)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~ 356 (393)
.......+..++.++.+++.+||+.||++|||+.+++.+.|
T Consensus 215 ----~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~~~~ 255 (256)
T cd06612 215 ----PPPTLSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQHPF 255 (256)
T ss_pred ----CCCCCCchhhcCHHHHHHHHHHHhcChhhCcCHHHHhcCCC
Confidence 00001112245678999999999999999999999998754
No 233
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=1.4e-40 Score=310.54 Aligned_cols=259 Identities=21% Similarity=0.275 Sum_probs=198.3
Q ss_pred cCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCC---cccHHHHHHHHHHhhcCCCCccceeeeeeecCCc
Q 035862 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG---LQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDE 148 (393)
Q Consensus 72 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 148 (393)
++|++.+.||+|+||.||++.+...+ ..+|+|.+.+.. ......+.+|+.++..++|+||+++++++...+
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~-----~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~- 74 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNAD-----KVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDEN- 74 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCC-----CEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCC-
Confidence 46899999999999999999875443 469999986421 122334678899999999999999999988766
Q ss_pred ccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeecc
Q 035862 149 RGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFG 228 (393)
Q Consensus 149 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg 228 (393)
..++||||+.+|+|.+++... ...+++..++.++.|++.||.|||+. +|+||||||+|||++.++.+||+|||
T Consensus 75 ---~~~lv~ey~~~g~L~~~l~~~-~~~l~~~~~~~~~~qi~~al~~lH~~---~iiHrDlkp~Nili~~~~~~kL~DfG 147 (332)
T cd05623 75 ---NLYLVMDYYVGGDLLTLLSKF-EDRLPEDMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADFG 147 (332)
T ss_pred ---EEEEEEeccCCCcHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEEeecc
Confidence 569999999999999999543 34589999999999999999999998 99999999999999999999999999
Q ss_pred CCccCCCCCCccccccccccCCccCccccc-----cCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhc
Q 035862 229 LAREGPTGDHTHVSTAVVGTYGYAAPEYIE-----TGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQF 303 (393)
Q Consensus 229 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~ 303 (393)
++........ .......||+.|+|||++. ...++.++|||||||++|||++|+.||......... ......
T Consensus 148 ~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~--~~i~~~- 223 (332)
T cd05623 148 SCLKLMEDGT-VQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETY--GKIMNH- 223 (332)
T ss_pred hheecccCCc-ceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHH--HHHhCC-
Confidence 9875432221 1223457999999999986 346889999999999999999999999765432211 111100
Q ss_pred CcCCcccccccCcccccccCHHHHHHHHHHHHHhcccCCCC--CCCHHHHHHHHHH
Q 035862 304 PADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEE--RPTMNQVVESLKL 357 (393)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~--Rps~~~~l~~l~~ 357 (393)
.... .. ......++.++.+|+.+||..++.. |+++.++++|.|.
T Consensus 224 ---~~~~------~~-p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h~~f 269 (332)
T cd05623 224 ---KERF------QF-PAQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQHPFF 269 (332)
T ss_pred ---Cccc------cC-CCccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCCCCc
Confidence 0000 00 0011235678999999999665444 6899999999654
No 234
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.5e-40 Score=325.28 Aligned_cols=280 Identities=20% Similarity=0.275 Sum_probs=194.8
Q ss_pred HHhcCCcccceecccCCceEEEEEEcCCCCCCC----------ceE----EEEEEecCCCcccHHHHHHHHHHhhcCCCC
Q 035862 69 EATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGE----------PLV----VAVKKLNNHGLQGHKQWLAEVQFLGVVSHP 134 (393)
Q Consensus 69 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~----------~~~----vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ 134 (393)
...++|++++.||+|+||+||++.++....... +.. ++.|.+.. .......+.+|+.+|+.++||
T Consensus 145 ~~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~-~~~~~~~~~~Ei~il~~l~Hp 223 (501)
T PHA03210 145 EFLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKA-GSRAAIQLENEILALGRLNHE 223 (501)
T ss_pred hhhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhc-chHHHHHHHHHHHHHHhCCCC
Confidence 346789999999999999999987643221100 000 01111111 112334577899999999999
Q ss_pred ccceeeeeeecCCcccceEEEEEeecCCCChHHHHhhcC---CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCC
Q 035862 135 NLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRA---QPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKT 211 (393)
Q Consensus 135 niv~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp 211 (393)
||+++++++...+ ..++|++++ +++|.+++.... ........++.++.||+.||.|||++ +|+||||||
T Consensus 224 nIv~l~~~~~~~~----~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~---gIiHrDLKP 295 (501)
T PHA03210 224 NILKIEEILRSEA----NTYMITQKY-DFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDK---KLIHRDIKL 295 (501)
T ss_pred CcCcEeEEEEECC----eeEEEEecc-ccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhC---CeecCCCCH
Confidence 9999999998776 458999999 457887774322 12234566788999999999999998 999999999
Q ss_pred CCeEeCCCCceEEeeccCCccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCc-cCCCCc
Q 035862 212 SNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRV-LERNRP 290 (393)
Q Consensus 212 ~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~p-f~~~~~ 290 (393)
+|||++.++.+||+|||++......... ......||..|+|||++.+..++.++|||||||++|||++|..+ +.....
T Consensus 296 ~NILl~~~~~vkL~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~ 374 (501)
T PHA03210 296 ENIFLNCDGKIVLGDFGTAMPFEKEREA-FDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGG 374 (501)
T ss_pred HHEEECCCCCEEEEeCCCceecCccccc-ccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCC
Confidence 9999999999999999999765432211 22346799999999999999999999999999999999998754 443332
Q ss_pred hhhhHHHHHHhhcCcCCccc-------ccccCc--------ccccc-cCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 035862 291 TMEQKLLEWVKQFPADGKKF-------SMMIDP--------RLRNQ-YSINAARRVAKLADNCLKKNPEERPTMNQVVES 354 (393)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~-------~~~~~~--------~~~~~-~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~ 354 (393)
.....+.............+ ...++. .+... .....+.++.+++.+||+.||.+|||+.|++.|
T Consensus 375 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~h 454 (501)
T PHA03210 375 KPGKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLAL 454 (501)
T ss_pred CHHHHHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhC
Confidence 22222222222111111100 000000 00000 001234567889999999999999999999999
Q ss_pred HHHH
Q 035862 355 LKLA 358 (393)
Q Consensus 355 l~~~ 358 (393)
.|..
T Consensus 455 p~f~ 458 (501)
T PHA03210 455 PLFS 458 (501)
T ss_pred hhhh
Confidence 8864
No 235
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=3.9e-40 Score=298.31 Aligned_cols=258 Identities=23% Similarity=0.346 Sum_probs=201.1
Q ss_pred HHhcCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcccHHHHHHHHHHhhcCCCCccceeeeeeecCCc
Q 035862 69 EATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDE 148 (393)
Q Consensus 69 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 148 (393)
..++.+.....||+|+||.||+|.+..+ +..|++|.+..........+.+|+.+++.++|+||+++++++...+
T Consensus 5 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~-----~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~- 78 (268)
T cd06624 5 YEYDENGERVVLGKGTYGIVYAARDLST-----QVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENG- 78 (268)
T ss_pred cccccCCceEEEecCCceEEEEeEecCC-----CcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCC-
Confidence 3455666667899999999999986533 3469999887765555667889999999999999999999988766
Q ss_pred ccceEEEEEeecCCCChHHHHhhcCCCCC--CHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCC-CCceEEe
Q 035862 149 RGIQRLLVYEYMPNRSLEDRLFSRAQPTL--PWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDG-NFKPKLS 225 (393)
Q Consensus 149 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~--~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~-~~~~kl~ 225 (393)
..++|+||+.+++|.+++.... ..+ ++..+..++.|++.||+|||+. +|+||||||+||+++. ++.++|+
T Consensus 79 ---~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~h~dl~p~nil~~~~~~~~~l~ 151 (268)
T cd06624 79 ---FFKIFMEQVPGGSLSALLRSKW-GPLKDNEQTIIFYTKQILEGLKYLHDN---QIVHRDIKGDNVLVNTYSGVVKIS 151 (268)
T ss_pred ---EEEEEEecCCCCCHHHHHHHhc-ccCCCcHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCeEEEe
Confidence 5699999999999999986432 234 7788889999999999999998 9999999999999976 6799999
Q ss_pred eccCCccCCCCCCccccccccccCCccCccccccC--CCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhc
Q 035862 226 DFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIETG--HLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQF 303 (393)
Q Consensus 226 Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~ 303 (393)
|||++........ ......++..|+|||.+.+. .++.++||||||+++|+|++|..||............. ..
T Consensus 152 dfg~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~~---~~ 226 (268)
T cd06624 152 DFGTSKRLAGINP--CTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKV---GM 226 (268)
T ss_pred cchhheecccCCC--ccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhhh---hh
Confidence 9999875432211 12234678999999998654 37889999999999999999999996543221111000 00
Q ss_pred CcCCcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 035862 304 PADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLK 356 (393)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~ 356 (393)
.......+..+++++.+|+.+||+.+|.+|||+.+++.|.|
T Consensus 227 ------------~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~ 267 (268)
T cd06624 227 ------------FKIHPEIPESLSAEAKNFILRCFEPDPDKRASAHDLLQDPF 267 (268)
T ss_pred ------------hccCCCCCcccCHHHHHHHHHHcCCCchhCCCHHHHHhCCC
Confidence 00111223345678999999999999999999999999865
No 236
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=2.6e-40 Score=299.17 Aligned_cols=257 Identities=23% Similarity=0.321 Sum_probs=198.9
Q ss_pred cCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCc-----ccHHHHHHHHHHhhcCCCCccceeeeeeecC
Q 035862 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL-----QGHKQWLAEVQFLGVVSHPNLVKLLGYCSTE 146 (393)
Q Consensus 72 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 146 (393)
.+|+..+.||+|+||.||+|....++ ..|++|.+..... .....+.+|+.+++.++||||+++++++...
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~-----~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 76 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTG-----RELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDR 76 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCC-----cEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcC
Confidence 36889999999999999999865433 4699998764321 2234577899999999999999999988754
Q ss_pred CcccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEee
Q 035862 147 DERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSD 226 (393)
Q Consensus 147 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~D 226 (393)
... ..+++|||+.+++|.+++.. ...+++..++.++.|++.||+|||+. +++||||+|+||+++.++.++|+|
T Consensus 77 ~~~--~~~l~~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~qi~~~l~~LH~~---~i~H~~l~p~nil~~~~~~~~l~d 149 (266)
T cd06651 77 AEK--TLTIFMEYMPGGSVKDQLKA--YGALTESVTRKYTRQILEGMSYLHSN---MIVHRDIKGANILRDSAGNVKLGD 149 (266)
T ss_pred CCC--EEEEEEeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEcc
Confidence 333 56899999999999999854 34578899999999999999999998 999999999999999999999999
Q ss_pred ccCCccCCCCCCc-cccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCc
Q 035862 227 FGLAREGPTGDHT-HVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPA 305 (393)
Q Consensus 227 fg~a~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~ 305 (393)
||++......... .......++..|+|||.+.+..++.++|||||||++|+|++|+.||......... .... ..
T Consensus 150 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~~--~~~~-~~-- 224 (266)
T cd06651 150 FGASKRLQTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAI--FKIA-TQ-- 224 (266)
T ss_pred CCCccccccccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHHHH--HHHh-cC--
Confidence 9998754321111 1112345788999999999888999999999999999999999999754322111 1100 00
Q ss_pred CCcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 035862 306 DGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKL 357 (393)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~ 357 (393)
......+..++..+.+++ +||..+|++||+++++++|.+.
T Consensus 225 -----------~~~~~~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~hp~~ 264 (266)
T cd06651 225 -----------PTNPQLPSHISEHARDFL-GCIFVEARHRPSAEELLRHPFA 264 (266)
T ss_pred -----------CCCCCCchhcCHHHHHHH-HHhcCChhhCcCHHHHhcCccc
Confidence 001122334557788888 6778999999999999998763
No 237
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=8.1e-41 Score=311.87 Aligned_cols=259 Identities=22% Similarity=0.273 Sum_probs=198.6
Q ss_pred cCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCC---cccHHHHHHHHHHhhcCCCCccceeeeeeecCCc
Q 035862 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG---LQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDE 148 (393)
Q Consensus 72 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 148 (393)
++|.+.+.||+|+||.||++++..+ +..||+|.+.+.. ......+.+|..++..++|+||+++++++...+
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~-----~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~- 74 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHT-----ERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDEN- 74 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCC-----CCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCC-
Confidence 4799999999999999999986543 3469999986531 122344678899999999999999999998776
Q ss_pred ccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeecc
Q 035862 149 RGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFG 228 (393)
Q Consensus 149 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg 228 (393)
..|+||||+.||+|.+++... ...+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||
T Consensus 75 ---~~~lv~Ey~~gg~L~~~l~~~-~~~l~~~~~~~~~~qi~~~L~~lH~~---~iiHrDlkp~Nill~~~~~~kl~DfG 147 (331)
T cd05624 75 ---YLYLVMDYYVGGDLLTLLSKF-EDRLPEDMARFYIAEMVLAIHSIHQL---HYVHRDIKPDNVLLDMNGHIRLADFG 147 (331)
T ss_pred ---EEEEEEeCCCCCcHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCchHHEEEcCCCCEEEEecc
Confidence 569999999999999999543 34688999999999999999999998 99999999999999999999999999
Q ss_pred CCccCCCCCCccccccccccCCccCcccccc-----CCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhc
Q 035862 229 LAREGPTGDHTHVSTAVVGTYGYAAPEYIET-----GHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQF 303 (393)
Q Consensus 229 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~ 303 (393)
++......... ......|++.|+|||++.+ ..++.++|||||||++|+|++|+.||.......... ....
T Consensus 148 ~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~--~i~~-- 222 (331)
T cd05624 148 SCLKMNQDGTV-QSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYG--KIMN-- 222 (331)
T ss_pred ceeeccCCCce-eeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHHHH--HHHc--
Confidence 98764332211 1233579999999999875 467889999999999999999999997654322111 1110
Q ss_pred CcCCcccccccCcccccccCHHHHHHHHHHHHHhcccCCCC--CCCHHHHHHHHHH
Q 035862 304 PADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEE--RPTMNQVVESLKL 357 (393)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~--Rps~~~~l~~l~~ 357 (393)
...... +. .....++.++.+++.+||+.++++ |++++++++|.|.
T Consensus 223 --~~~~~~--~p-----~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h~~f 269 (331)
T cd05624 223 --HEERFQ--FP-----SHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKHAFF 269 (331)
T ss_pred --CCCccc--CC-----CccccCCHHHHHHHHHHccCchhhcCCCCHHHHhcCCCc
Confidence 000000 00 001134678999999999876554 4689999998653
No 238
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=5e-40 Score=300.44 Aligned_cols=260 Identities=27% Similarity=0.408 Sum_probs=203.2
Q ss_pred cCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCC-CcccHHHHHHHHHHhhcCCCCccceeeeeeecCCccc
Q 035862 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNH-GLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERG 150 (393)
Q Consensus 72 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 150 (393)
++|++++.||+|+||.||+|.+... +..|++|.+... .......+.+|+.+++.++||||+++++.+...+
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~-----~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~--- 72 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPT-----GVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEG--- 72 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCC-----CcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCC---
Confidence 3688999999999999999986533 346999988653 2233456889999999999999999999888765
Q ss_pred ceEEEEEeecCCCChHHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccC
Q 035862 151 IQRLLVYEYMPNRSLEDRLFSRA-QPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGL 229 (393)
Q Consensus 151 ~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~ 229 (393)
..++||||+++++|..++.... ...+++..+..++.|++.||.|||+. .+++|+||||+||+++.++.++|+|||+
T Consensus 73 -~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~--~~i~H~dl~p~nil~~~~~~~~l~dfg~ 149 (286)
T cd06622 73 -AVYMCMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEE--HNIIHRDVKPTNVLVNGNGQVKLCDFGV 149 (286)
T ss_pred -eEEEEEeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhc--CCEeeCCCCHHHEEECCCCCEEEeecCC
Confidence 5699999999999998885431 23689999999999999999999962 2899999999999999999999999999
Q ss_pred CccCCCCCCccccccccccCCccCccccccC------CCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhc
Q 035862 230 AREGPTGDHTHVSTAVVGTYGYAAPEYIETG------HLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQF 303 (393)
Q Consensus 230 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~------~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~ 303 (393)
+...... ......++..|+|||.+.+. .++.++|||||||++|+|++|..||.................
T Consensus 150 ~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~- 224 (286)
T cd06622 150 SGNLVAS----LAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAIVD- 224 (286)
T ss_pred cccccCC----ccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHHHHHHhh-
Confidence 8754322 12334678899999998554 357899999999999999999999975433221111111100
Q ss_pred CcCCcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHh
Q 035862 304 PADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQ 360 (393)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~~~ 360 (393)
......+..++.++.+|+.+||+.+|++||++.+++.+.|....
T Consensus 225 -------------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~~~~~~~ 268 (286)
T cd06622 225 -------------GDPPTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEHPWLVKY 268 (286)
T ss_pred -------------cCCCCCCcccCHHHHHHHHHHcccCcccCCCHHHHhcChhhhhc
Confidence 00111223467889999999999999999999999999887654
No 239
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=8.5e-41 Score=282.59 Aligned_cols=255 Identities=27% Similarity=0.435 Sum_probs=200.3
Q ss_pred cCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCC-cccHHHHHHHHHHhhcCC-CCccceeeeeeecCCcc
Q 035862 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG-LQGHKQWLAEVQFLGVVS-HPNLVKLLGYCSTEDER 149 (393)
Q Consensus 72 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~ 149 (393)
++.+.+..||.|+.|.|++++++.+ +.++|||.+.+.. ....++++..+.++...+ .|+||+.+|+|..+...
T Consensus 92 ndl~~l~dlGsGtcG~V~k~~~rs~-----~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV 166 (391)
T KOG0983|consen 92 NDLENLGDLGSGTCGQVWKMRFRST-----GHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDV 166 (391)
T ss_pred HHhhhHHhhcCCCccceEEEEEccc-----ceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchH
Confidence 4456677899999999999998654 3579999998764 344567778888877665 89999999999887754
Q ss_pred cceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccC
Q 035862 150 GIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGL 229 (393)
Q Consensus 150 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~ 229 (393)
++-||.| +.-++.++ .+...++|+..+-.+...+++||.||..+ ++|+|||+||.|||+|+.|++||||||+
T Consensus 167 ----~IcMelM-s~C~ekLl-krik~piPE~ilGk~tva~v~AL~YLKeK--H~viHRDvKPSNILlDe~GniKlCDFGI 238 (391)
T KOG0983|consen 167 ----FICMELM-STCAEKLL-KRIKGPIPERILGKMTVAIVKALYYLKEK--HGVIHRDVKPSNILLDERGNIKLCDFGI 238 (391)
T ss_pred ----HHHHHHH-HHHHHHHH-HHhcCCchHHhhhhhHHHHHHHHHHHHHh--cceeecccCccceEEccCCCEEeecccc
Confidence 6678888 33444444 34456699999999999999999999876 5999999999999999999999999999
Q ss_pred CccCCCCCCccccccccccCCccCccccc---cCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcC
Q 035862 230 AREGPTGDHTHVSTAVVGTYGYAAPEYIE---TGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPAD 306 (393)
Q Consensus 230 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~ 306 (393)
+..+.... ..+...|-+.|||||.+. ...|+.++||||||++++||.||..||.......+-...-. ...|
T Consensus 239 sGrlvdSk---AhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvl-n~eP-- 312 (391)
T KOG0983|consen 239 SGRLVDSK---AHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVL-NEEP-- 312 (391)
T ss_pred cceeeccc---ccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHH-hcCC--
Confidence 98765433 345567899999999985 35799999999999999999999999988765433221111 1110
Q ss_pred CcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 035862 307 GKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLK 356 (393)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~ 356 (393)
+.++ ....+++++.+|+..||++|+.+||...++++|..
T Consensus 313 ---------P~L~--~~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h~F 351 (391)
T KOG0983|consen 313 ---------PLLP--GHMGFSPDFQSFVKDCLTKDHRKRPKYNKLLEHPF 351 (391)
T ss_pred ---------CCCC--cccCcCHHHHHHHHHHhhcCcccCcchHHHhcCcc
Confidence 1111 12237889999999999999999999999999853
No 240
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=2.1e-40 Score=302.88 Aligned_cols=266 Identities=26% Similarity=0.355 Sum_probs=202.8
Q ss_pred HHHHHHhcCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcccHHHHHHHHHHhhcC-CCCccceeeeee
Q 035862 65 QELREATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVV-SHPNLVKLLGYC 143 (393)
Q Consensus 65 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~ 143 (393)
..+....++|++.+.||+|+||.||+|.+...+ ..+++|...... .....+.+|+.+++.+ +||||+++++++
T Consensus 11 ~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~-----~~~~ik~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~ 84 (286)
T cd06638 11 DSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNG-----SKAAVKILDPIH-DIDEEIEAEYNILKALSDHPNVVKFYGMY 84 (286)
T ss_pred ecCCCcccceeeeeeeccCCCcEEEEEEECCCC-----ceeEEEeecccc-chHHHHHHHHHHHHHHhcCCCeeeeeeee
Confidence 334456788999999999999999999865433 458999876532 2235577899999998 699999999987
Q ss_pred ecCC-cccceEEEEEeecCCCChHHHHhh--cCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCC
Q 035862 144 STED-ERGIQRLLVYEYMPNRSLEDRLFS--RAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNF 220 (393)
Q Consensus 144 ~~~~-~~~~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~ 220 (393)
.... ..+...++||||+++++|.+++.. .....+++..++.++.|++.||.|||+. +++||||||+||++++++
T Consensus 85 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~~ 161 (286)
T cd06638 85 YKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVN---KTIHRDVKGNNILLTTEG 161 (286)
T ss_pred eecccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhC---CccccCCCHHhEEECCCC
Confidence 5432 222367999999999999998753 2335688999999999999999999998 999999999999999999
Q ss_pred ceEEeeccCCccCCCCCCccccccccccCCccCcccccc-----CCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhH
Q 035862 221 KPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIET-----GHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQK 295 (393)
Q Consensus 221 ~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~ 295 (393)
.++|+|||++........ ......|++.|+|||++.. ..++.++|||||||++|+|++|..||....+...
T Consensus 162 ~~kl~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~-- 237 (286)
T cd06638 162 GVKLVDFGVSAQLTSTRL--RRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRA-- 237 (286)
T ss_pred CEEEccCCceeecccCCC--ccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHH--
Confidence 999999999876433221 2234568999999998753 4578899999999999999999999975433211
Q ss_pred HHHHHhhcCcCCcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 035862 296 LLEWVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLK 356 (393)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~ 356 (393)
........ ... ...+..++.++.+++.+||+.||++|||+.+++++++
T Consensus 238 ~~~~~~~~-----------~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~~ 285 (286)
T cd06638 238 LFKIPRNP-----------PPT--LHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHVF 285 (286)
T ss_pred HhhccccC-----------CCc--ccCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhccc
Confidence 11100000 000 0011123467999999999999999999999999875
No 241
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=5.9e-40 Score=299.78 Aligned_cols=267 Identities=24% Similarity=0.341 Sum_probs=202.0
Q ss_pred CCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCC--cccHHHHHHHHHHhhcCCCCccceeeeeeecCCccc
Q 035862 73 GFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG--LQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERG 150 (393)
Q Consensus 73 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 150 (393)
+|++.+.||.|++|.||+|.+... +..|++|.+.... ......+.+|+.+++.++||||+++++++....
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~-----~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~--- 72 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRET-----GETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGS--- 72 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCC-----CceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCC---
Confidence 588999999999999999997543 3459999887543 233466889999999999999999999988755
Q ss_pred ceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCC
Q 035862 151 IQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLA 230 (393)
Q Consensus 151 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a 230 (393)
..++||||+ +++|.+++.... ..+++..++.++.|++.||+|||+. +++|+||||+||++++++.++|+|||++
T Consensus 73 -~~~~v~e~~-~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~~~~~~~~~l~dfg~~ 146 (286)
T cd07832 73 -GFVLVMEYM-PSDLSEVLRDEE-RPLPEAQVKSYMRMLLKGVAYMHAN---GIMHRDLKPANLLISADGVLKIADFGLA 146 (286)
T ss_pred -eeEEEeccc-CCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCHHHEEEcCCCcEEEeeeeec
Confidence 569999999 999999886443 5689999999999999999999998 9999999999999999999999999998
Q ss_pred ccCCCCCCccccccccccCCccCccccccC-CCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcCCc-
Q 035862 231 REGPTGDHTHVSTAVVGTYGYAAPEYIETG-HLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGK- 308 (393)
Q Consensus 231 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~- 308 (393)
........ .......++..|+|||.+.+. .++.++||||+|+++|+|++|.++|....+..... ...........
T Consensus 147 ~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~--~~~~~~~~~~~~ 223 (286)
T cd07832 147 RLFSEEEP-RLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLA--IVFRTLGTPNEE 223 (286)
T ss_pred ccccCCCC-CccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHH--HHHHHcCCCChH
Confidence 86544321 122345788999999988654 46899999999999999999988886554322111 11111000000
Q ss_pred ------cc---ccc-c--Cccc-ccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 035862 309 ------KF---SMM-I--DPRL-RNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLK 356 (393)
Q Consensus 309 ------~~---~~~-~--~~~~-~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~ 356 (393)
.. ... . .... ......+.+..+.+++.+||+.+|++||++++++.|.|
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h~~ 284 (286)
T cd07832 224 TWPGLTSLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRHPY 284 (286)
T ss_pred HHhhccCcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhCcC
Confidence 00 000 0 0000 00011134588999999999999999999999999875
No 242
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=3.6e-40 Score=301.12 Aligned_cols=263 Identities=27% Similarity=0.371 Sum_probs=205.2
Q ss_pred hcCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCC-cccHHHHHHHHHHhhcCCCCccceeeeeeecCCcc
Q 035862 71 TNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG-LQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDER 149 (393)
Q Consensus 71 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 149 (393)
.++|++.+.||+|+||+||++.+... +..|++|++.... ......+.+|+++++.++||||+++++.+...+
T Consensus 4 ~~~~~~~~~ig~g~~g~v~~~~~~~~-----~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-- 76 (284)
T cd06620 4 NEDLETISDLGAGNGGSVSKVKHIPT-----GTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNEN-- 76 (284)
T ss_pred HHHHHHHHHcCCCCCeEEEEEEEcCC-----CcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCC--
Confidence 35688999999999999999986533 3468999876543 234567889999999999999999999998775
Q ss_pred cceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccC
Q 035862 150 GIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGL 229 (393)
Q Consensus 150 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~ 229 (393)
.+++||||+++++|.+++.. ...+++..+..++.+++.||.|||+. .+++||||+|+||++++++.++|+|||+
T Consensus 77 --~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~~i~~~l~~LH~~--~~i~H~dl~p~nil~~~~~~~~l~d~gl 150 (284)
T cd06620 77 --NICMCMEFMDCGSLDRIYKK--GGPIPVEILGKIAVAVVEGLTYLYNV--HRIMHRDIKPSNILVNSRGQIKLCDFGV 150 (284)
T ss_pred --EEEEEEecCCCCCHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHHHh--cCeeccCCCHHHEEECCCCcEEEccCCc
Confidence 56999999999999998843 35689999999999999999999963 2899999999999999999999999999
Q ss_pred CccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchh-----hhHHHHHHhhcC
Q 035862 230 AREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTM-----EQKLLEWVKQFP 304 (393)
Q Consensus 230 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~-----~~~~~~~~~~~~ 304 (393)
+....... .....|+..|+|||++.+..++.++|||||||++|+|++|..||....... ............
T Consensus 151 ~~~~~~~~----~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (284)
T cd06620 151 SGELINSI----ADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIV 226 (284)
T ss_pred ccchhhhc----cCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHh
Confidence 86532211 123578999999999988899999999999999999999999997654321 011111111110
Q ss_pred cCCcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHh
Q 035862 305 ADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQ 360 (393)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~~~ 360 (393)
. ..........++.++.+|+.+||+.||.+|||+.+++++++.+..
T Consensus 227 ~----------~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~~~~ 272 (284)
T cd06620 227 Q----------EPPPRLPSSDFPEDLRDFVDACLLKDPTERPTPQQLCAMPPFIQA 272 (284)
T ss_pred h----------ccCCCCCchhcCHHHHHHHHHHhcCCcccCcCHHHHhcCcccccc
Confidence 0 000000111256789999999999999999999999999876543
No 243
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=1.6e-39 Score=294.40 Aligned_cols=254 Identities=28% Similarity=0.400 Sum_probs=188.0
Q ss_pred eecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCc-ccHHHHHHHHHHhhcCCCCccceeeeeeecCCcccceEEEEE
Q 035862 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL-QGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVY 157 (393)
Q Consensus 79 ~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv~ 157 (393)
.||+|+||.||+|..... .....+++|.+..... .....+.+|+.+++.++||||+++++.+...+ ..++||
T Consensus 2 ~lg~G~fg~v~~~~~~~~---~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~----~~~lv~ 74 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRG---MSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESI----PYLLVL 74 (269)
T ss_pred cCCccCCceEEEEEEecC---CCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCC----ceEEEE
Confidence 599999999999975422 2345688887764432 23456788999999999999999999988766 459999
Q ss_pred eecCCCChHHHHhhcCC---CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCCccCC
Q 035862 158 EYMPNRSLEDRLFSRAQ---PTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGP 234 (393)
Q Consensus 158 e~~~~~~L~~~l~~~~~---~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~ 234 (393)
||+.+++|.+++..... ...++..++.++.|++.||+|||+. +|+||||||+|||+++++.+||+|||++....
T Consensus 75 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~ 151 (269)
T cd05042 75 EFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQA---DFIHSDLALRNCQLTADLSVKIGDYGLALEQY 151 (269)
T ss_pred EeCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhc---CEecccccHhheEecCCCcEEEeccccccccc
Confidence 99999999999965432 2346778889999999999999998 99999999999999999999999999986533
Q ss_pred CCCCccccccccccCCccCcccccc-------CCCCchhhHHHHHHHHHHHHh-CCCccCCCCchhhhHHHHHHhhcCcC
Q 035862 235 TGDHTHVSTAVVGTYGYAAPEYIET-------GHLKSQSDIWSFGVVLYEILT-GRRVLERNRPTMEQKLLEWVKQFPAD 306 (393)
Q Consensus 235 ~~~~~~~~~~~~gt~~y~aPE~~~~-------~~~~~~~DiwslGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~ 306 (393)
............++..|+|||++.. ..++.++|||||||++|||++ |..||....+... ..........
T Consensus 152 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~--~~~~~~~~~~- 228 (269)
T cd05042 152 PEDYYITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQV--LKQVVREQDI- 228 (269)
T ss_pred cchheeccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHH--HHHHhhccCc-
Confidence 2221111223345678999998743 456889999999999999999 7788865433211 1111111000
Q ss_pred CcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 035862 307 GKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESL 355 (393)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l 355 (393)
. ...+ .....++..+.+++..|| .||++|||++++++.+
T Consensus 229 --~---~~~~----~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l 267 (269)
T cd05042 229 --K---LPKP----QLDLKYSDRWYEVMQFCW-LDPETRPTAEEVHELL 267 (269)
T ss_pred --c---CCCC----cccccCCHHHHHHHHHHh-cCcccccCHHHHHHHh
Confidence 0 0011 112234577788999998 5999999999999876
No 244
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.4e-41 Score=312.17 Aligned_cols=261 Identities=26% Similarity=0.415 Sum_probs=220.8
Q ss_pred hcCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcccHHHHHHHHHHhhcCCCCccceeeeeeecCCccc
Q 035862 71 TNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERG 150 (393)
Q Consensus 71 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 150 (393)
..+.....+||-|.||.||.|.|+..+- .||||.++.+. -...+|+.|+.+|+.++|||+|+++|+|..+...
T Consensus 266 RtdItMkhKLGGGQYGeVYeGvWKkysl-----TvAVKtLKEDt-MeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPF- 338 (1157)
T KOG4278|consen 266 RTDITMKHKLGGGQYGEVYEGVWKKYSL-----TVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPF- 338 (1157)
T ss_pred chheeeeeccCCCcccceeeeeeeccce-----eeehhhhhhcc-hhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCe-
Confidence 3456667889999999999999876554 49999998764 4567899999999999999999999999988854
Q ss_pred ceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCC
Q 035862 151 IQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLA 230 (393)
Q Consensus 151 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a 230 (393)
|||+|||..|+|.+||+.-....++....+.++.||.+|++||..+ ++|||||...|+|+.++..||++|||++
T Consensus 339 ---YIiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkk---nFIHRDLAARNCLVgEnhiVKvADFGLs 412 (1157)
T KOG4278|consen 339 ---YIITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHIVKVADFGLS 412 (1157)
T ss_pred ---EEEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHh---hhhhhhhhhhhccccccceEEeeccchh
Confidence 9999999999999999877777788888899999999999999998 9999999999999999999999999999
Q ss_pred ccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHh-CCCccCCCCchhhhHHHHHHhhcCcCCcc
Q 035862 231 REGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILT-GRRVLERNRPTMEQKLLEWVKQFPADGKK 309 (393)
Q Consensus 231 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 309 (393)
+..... .+.......-...|.|||-+....++.|+|||+|||+|||+.| |..||.+-+-...
T Consensus 413 RlMtgD-TYTAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSqV---------------- 475 (1157)
T KOG4278|consen 413 RLMTGD-TYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV---------------- 475 (1157)
T ss_pred hhhcCC-ceecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHHHH----------------
Confidence 976433 2323333344568999999999999999999999999999998 7788875433221
Q ss_pred cccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhh
Q 035862 310 FSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQES 362 (393)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~~~~~ 362 (393)
-.++.+.++...+..|++.+++|++.||+++|.+||++.++-+.++.++..+
T Consensus 476 -Y~LLEkgyRM~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtmf~~s 527 (1157)
T KOG4278|consen 476 -YGLLEKGYRMDGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFETMFSSS 527 (1157)
T ss_pred -HHHHhccccccCCCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHHhccc
Confidence 1234455666677789999999999999999999999999999999887644
No 245
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=1.3e-39 Score=295.30 Aligned_cols=251 Identities=31% Similarity=0.495 Sum_probs=194.1
Q ss_pred eecccCCceEEEEEEcCCCCCCCceEEEEEEecCCC-cccHHHHHHHHHHhhcC-CCCccceeeeeeecCCcccceEEEE
Q 035862 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG-LQGHKQWLAEVQFLGVV-SHPNLVKLLGYCSTEDERGIQRLLV 156 (393)
Q Consensus 79 ~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~lv 156 (393)
.||+|+||.||+|.+..+ +....+++|.+.... ......+.+|+.++..+ +||||+++++++...+ ..+++
T Consensus 2 ~lg~g~~g~v~~~~~~~~---~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~----~~~lv 74 (270)
T cd05047 2 VIGEGNFGQVLKARIKKD---GLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRG----YLYLA 74 (270)
T ss_pred cCCCCCCceEEEEEEcCC---CCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCC----CceEE
Confidence 589999999999987532 233457888876432 23345678899999999 7999999999998766 45999
Q ss_pred EeecCCCChHHHHhhcC--------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCce
Q 035862 157 YEYMPNRSLEDRLFSRA--------------QPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKP 222 (393)
Q Consensus 157 ~e~~~~~~L~~~l~~~~--------------~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~ 222 (393)
|||+.+++|.+++.... ...+++..++.++.|++.||+|||+. +++||||||+||++++++.+
T Consensus 75 ~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nili~~~~~~ 151 (270)
T cd05047 75 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVA 151 (270)
T ss_pred EEeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccccceEEEcCCCeE
Confidence 99999999999985432 13478899999999999999999998 99999999999999999999
Q ss_pred EEeeccCCccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHh-CCCccCCCCchhhhHHHHHHh
Q 035862 223 KLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILT-GRRVLERNRPTMEQKLLEWVK 301 (393)
Q Consensus 223 kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ellt-g~~pf~~~~~~~~~~~~~~~~ 301 (393)
||+|||++...... ........+..|+|||++.+..++.++|||||||++|||++ |..||....... .....
T Consensus 152 kl~dfgl~~~~~~~---~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~---~~~~~- 224 (270)
T cd05047 152 KIADFGLSRGQEVY---VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE---LYEKL- 224 (270)
T ss_pred EECCCCCccccchh---hhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHHH---HHHHH-
Confidence 99999998632211 11112233567999999988899999999999999999997 999996543211 11111
Q ss_pred hcCcCCcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHH
Q 035862 302 QFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAV 359 (393)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~~ 359 (393)
+.. .....+..++.++.+++.+||..+|.+|||+.+++..|..++
T Consensus 225 --~~~-----------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~ 269 (270)
T cd05047 225 --PQG-----------YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 269 (270)
T ss_pred --hCC-----------CCCCCCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence 110 000111234567899999999999999999999999998775
No 246
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=3.1e-41 Score=314.72 Aligned_cols=245 Identities=24% Similarity=0.326 Sum_probs=189.2
Q ss_pred ecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCc---ccHHHHHHHHHHhhcC---CCCccceeeeeeecCCcccceE
Q 035862 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL---QGHKQWLAEVQFLGVV---SHPNLVKLLGYCSTEDERGIQR 153 (393)
Q Consensus 80 lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l---~h~niv~~~~~~~~~~~~~~~~ 153 (393)
||+|+||+||+|++..++ ..||+|++..... ........|..++... .||||+++++++...+ ..
T Consensus 1 lG~G~~g~Vy~~~~~~~~-----~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~----~~ 71 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTR-----RIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDS----DL 71 (330)
T ss_pred CCCCCceEEEEEEECCCC-----CEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCC----eE
Confidence 799999999999865433 4699999864321 1223345566666654 6999999999988776 56
Q ss_pred EEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCCccC
Q 035862 154 LLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREG 233 (393)
Q Consensus 154 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~ 233 (393)
++||||+.+++|.+++. ....+++..++.++.||+.||+|||++ +|+||||||+|||++.++.+||+|||++...
T Consensus 72 ~lv~e~~~~g~L~~~l~--~~~~~~~~~~~~~~~qil~al~~LH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~ 146 (330)
T cd05586 72 YLVTDYMSGGELFWHLQ--KEGRFSEDRAKFYIAELVLALEHLHKY---DIVYRDLKPENILLDATGHIALCDFGLSKAN 146 (330)
T ss_pred EEEEcCCCCChHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEecCCcCcCC
Confidence 99999999999999884 345689999999999999999999998 9999999999999999999999999998753
Q ss_pred CCCCCccccccccccCCccCccccccC-CCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcCCccccc
Q 035862 234 PTGDHTHVSTAVVGTYGYAAPEYIETG-HLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKFSM 312 (393)
Q Consensus 234 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (393)
..... ......||+.|+|||++.+. .++.++|||||||++|+|++|..||........ ..... .....
T Consensus 147 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~--~~~i~----~~~~~--- 215 (330)
T cd05586 147 LTDNK--TTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQM--YRNIA----FGKVR--- 215 (330)
T ss_pred CCCCC--CccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHH--HHHHH----cCCCC---
Confidence 22221 22346799999999998754 589999999999999999999999976533211 11110 00000
Q ss_pred ccCcccccccCHHHHHHHHHHHHHhcccCCCCCC----CHHHHHHHHHH
Q 035862 313 MIDPRLRNQYSINAARRVAKLADNCLKKNPEERP----TMNQVVESLKL 357 (393)
Q Consensus 313 ~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rp----s~~~~l~~l~~ 357 (393)
+. ...++.++.+|+.+||+.||.+|| ++.++++|.|.
T Consensus 216 -----~~---~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~h~~~ 256 (330)
T cd05586 216 -----FP---KNVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKEHPFF 256 (330)
T ss_pred -----CC---CccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhcCccc
Confidence 00 012457789999999999999998 68999998764
No 247
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=3.2e-40 Score=299.58 Aligned_cols=261 Identities=29% Similarity=0.397 Sum_probs=204.5
Q ss_pred HhcCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcccHHHHHHHHHHhhcC-CCCccceeeeeeecCCc
Q 035862 70 ATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVV-SHPNLVKLLGYCSTEDE 148 (393)
Q Consensus 70 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~ 148 (393)
..++|++.+.||+|++|.||+|.+... +..+++|.+..... ....+.+|+.+++.+ .|+||+++++++.....
T Consensus 4 ~~~~y~~~~~l~~g~~~~v~~~~~~~~-----~~~~~~k~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~ 77 (275)
T cd06608 4 PTGIFELVEVIGEGTYGKVYKARHKKT-----GQLVAIKIMDIIED-EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNP 77 (275)
T ss_pred chhheeheeeecCCCCeEEEEEEECCC-----CcEEEEEEEecCch-hHHHHHHHHHHHHHhcCCCChheEEEEEEecCC
Confidence 457899999999999999999987533 34699998876542 346688999999998 69999999999976552
Q ss_pred --ccceEEEEEeecCCCChHHHHhhcC--CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEE
Q 035862 149 --RGIQRLLVYEYMPNRSLEDRLFSRA--QPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKL 224 (393)
Q Consensus 149 --~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl 224 (393)
.+...++||||+++++|.+++.... ...+++..++.++.|++.||.|||+. +++|+||+|+||++++++.++|
T Consensus 78 ~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~~l~p~ni~~~~~~~~~l 154 (275)
T cd06608 78 PGNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHEN---KVIHRDIKGQNILLTKNAEVKL 154 (275)
T ss_pred CCcceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEEccCCeEEE
Confidence 2346799999999999999885433 46789999999999999999999998 9999999999999999999999
Q ss_pred eeccCCccCCCCCCccccccccccCCccCcccccc-----CCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHH
Q 035862 225 SDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIET-----GHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEW 299 (393)
Q Consensus 225 ~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~ 299 (393)
+|||++....... .......|+..|+|||.+.. ..++.++|||||||++|+|++|..||........ ....
T Consensus 155 ~d~~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~--~~~~ 230 (275)
T cd06608 155 VDFGVSAQLDSTL--GRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRA--LFKI 230 (275)
T ss_pred CCCccceecccch--hhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHH--HHHh
Confidence 9999987543322 12234568899999998753 3567899999999999999999999975432211 1111
Q ss_pred HhhcCcCCcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 035862 300 VKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLK 356 (393)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~ 356 (393)
....+ + ....+...+.++.+|+.+||..||++|||+.+++++.|
T Consensus 231 ~~~~~-----------~--~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~~~ 274 (275)
T cd06608 231 PRNPP-----------P--TLKSPENWSKKFNDFISECLIKNYEQRPFMEELLEHPF 274 (275)
T ss_pred hccCC-----------C--CCCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhcCCC
Confidence 11100 0 01112235678999999999999999999999998765
No 248
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=5e-40 Score=295.46 Aligned_cols=253 Identities=25% Similarity=0.383 Sum_probs=203.5
Q ss_pred CCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCC--CcccHHHHHHHHHHhhcCCCCccceeeeeeecCCccc
Q 035862 73 GFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNH--GLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERG 150 (393)
Q Consensus 73 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 150 (393)
+|++.+.||+|+||.+|++..... +..|++|.+... .......+.+|+.+++.++||||+++++++...+
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~-----~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--- 72 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKED-----GKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENG--- 72 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCC-----CCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCC---
Confidence 588999999999999999986533 346999988643 2233456888999999999999999999987765
Q ss_pred ceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCC
Q 035862 151 IQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLA 230 (393)
Q Consensus 151 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a 230 (393)
..++||||+.+++|.+++.......+++..++.++.|++.||.|||++ +++|+||+|+||+++.++.++|+|||++
T Consensus 73 -~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~l~~~nil~~~~~~~~l~d~~~~ 148 (256)
T cd08218 73 -NLYIVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTIKLGDFGIA 148 (256)
T ss_pred -eEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEEeeccce
Confidence 569999999999999988655555688999999999999999999998 9999999999999999999999999998
Q ss_pred ccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcCCccc
Q 035862 231 REGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKF 310 (393)
Q Consensus 231 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (393)
........ ......|++.|+|||++.+..++.++|+|||||++|+|++|..||........ ........
T Consensus 149 ~~~~~~~~--~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~--~~~~~~~~------- 217 (256)
T cd08218 149 RVLNSTVE--LARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNL--VLKIIRGS------- 217 (256)
T ss_pred eecCcchh--hhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHHHH--HHHHhcCC-------
Confidence 76433221 12334688899999999988999999999999999999999999975433211 11111110
Q ss_pred ccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 035862 311 SMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLK 356 (393)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~ 356 (393)
....+...+.++.+++.+||+.+|.+||++.++++|.|
T Consensus 218 --------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~~~ 255 (256)
T cd08218 218 --------YPPVSSHYSYDLRNLVSQLFKRNPRDRPSVNSILEKNF 255 (256)
T ss_pred --------CCCCcccCCHHHHHHHHHHhhCChhhCcCHHHHhhCcC
Confidence 01112234678999999999999999999999999854
No 249
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=5.7e-41 Score=312.81 Aligned_cols=256 Identities=26% Similarity=0.358 Sum_probs=214.5
Q ss_pred hcCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcc--cHHHHHHHHHHhhcCCCCccceeeeeeecCCc
Q 035862 71 TNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQ--GHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDE 148 (393)
Q Consensus 71 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 148 (393)
.+.|.+...||+|.|+.|.+|++..++.+ ||+|.+.+.... ....+.+|+++++.++|||||+++.+...+.
T Consensus 55 vg~y~i~~tig~g~f~~V~La~~~~t~~~-----VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~- 128 (596)
T KOG0586|consen 55 VGLYVIIKTIGKGNFAKVKLARHILTGTE-----VAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEA- 128 (596)
T ss_pred ccceeeeeeeccceeEEEEeeEecCCCce-----EEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecc-
Confidence 56799999999999999999998766554 999999886433 3345789999999999999999999998887
Q ss_pred ccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeecc
Q 035862 149 RGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFG 228 (393)
Q Consensus 149 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg 228 (393)
.+|+||||+.+|.+++++ .....+.+..+..++.|+++|++|||++ .|||||||++|||++.+.++||+|||
T Consensus 129 ---~lylV~eya~~ge~~~yl--~~~gr~~e~~ar~~F~q~vsaveYcH~k---~ivHrdLk~eNilL~~~mnikIaDfg 200 (596)
T KOG0586|consen 129 ---TLYLVMEYASGGELFDYL--VKHGRMKEKEARAKFRQIVSAVEYCHSK---NIVHRDLKAENILLDENMNIKIADFG 200 (596)
T ss_pred ---eeEEEEEeccCchhHHHH--HhcccchhhhhhhhhHHHHHHHHHHhhc---ceeccccchhhcccccccceeeeccc
Confidence 569999999999999999 4555677789999999999999999999 99999999999999999999999999
Q ss_pred CCccCCCCCCccccccccccCCccCccccccCCC-CchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcCC
Q 035862 229 LAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHL-KSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADG 307 (393)
Q Consensus 229 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 307 (393)
++..+.... .....+|++.|.|||++.+..| .+.+|+||+|+++|.|+.|..||++..-
T Consensus 201 fS~~~~~~~---~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~l----------------- 260 (596)
T KOG0586|consen 201 FSTFFDYGL---MLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNL----------------- 260 (596)
T ss_pred cceeecccc---cccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCccc-----------------
Confidence 998876433 4467899999999999999877 4689999999999999999999985432
Q ss_pred cccccccCccccc--ccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhhc
Q 035862 308 KKFSMMIDPRLRN--QYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQESE 363 (393)
Q Consensus 308 ~~~~~~~~~~~~~--~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~~~~~~ 363 (393)
..+-++-++. ..+.-++.++.++|+++|..+|.+|++++++.++-|.-....+
T Consensus 261 ---k~Lr~rvl~gk~rIp~~ms~dce~lLrk~lvl~Pskr~~~dqim~~~W~n~~~~~ 315 (596)
T KOG0586|consen 261 ---KELRPRVLRGKYRIPFYMSCDCEDLLRKFLVLNPSKRGPCDQIMKDRWRNDLLEA 315 (596)
T ss_pred ---ccccchheeeeecccceeechhHHHHHHhhccCccccCCHHHhhhhcccchhhhh
Confidence 1111111111 1222467889999999999999999999999999886554444
No 250
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=3.1e-40 Score=301.30 Aligned_cols=266 Identities=29% Similarity=0.442 Sum_probs=206.9
Q ss_pred cCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcc-cHHHHHHHHHHhhcCCCCccceeeeeeecCCccc
Q 035862 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQ-GHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERG 150 (393)
Q Consensus 72 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 150 (393)
..|++.+.||+|+||.||+|.+...+ ...+..+|+|.+...... ....+.+|+.+++.++||||+++++++...+..
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~-~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~- 81 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLG-DNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGR- 81 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCC-CCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCC-
Confidence 35788899999999999999875432 335668999999866443 456788999999999999999999988764433
Q ss_pred ceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCC
Q 035862 151 IQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLA 230 (393)
Q Consensus 151 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a 230 (393)
..+++|||+++++|.+++.... ..+++..++.++.|++.||+|||+. +++|+||||+||+++.++.++|+|||++
T Consensus 82 -~~~lv~e~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~ 156 (284)
T cd05038 82 -SLRLIMEYLPSGSLRDYLQRHR-DQINLKRLLLFSSQICKGMDYLGSQ---RYIHRDLAARNILVESEDLVKISDFGLA 156 (284)
T ss_pred -ceEEEEecCCCCCHHHHHHhCc-cccCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEcccccc
Confidence 5699999999999999986433 3589999999999999999999998 9999999999999999999999999999
Q ss_pred ccCCCCCCcc-ccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhh------------hHHH
Q 035862 231 REGPTGDHTH-VSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTME------------QKLL 297 (393)
Q Consensus 231 ~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~------------~~~~ 297 (393)
.......... ......++..|+|||.+.+..++.++||||||+++|+|++|..|+........ ....
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (284)
T cd05038 157 KVLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLL 236 (284)
T ss_pred cccccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHH
Confidence 8764322211 11123445679999999888999999999999999999999998864322110 0111
Q ss_pred HHHhhcCcCCcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q 035862 298 EWVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLA 358 (393)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~ 358 (393)
.... .......+..++.++.+++.+||+.+|++||++.++++.|..+
T Consensus 237 ~~~~--------------~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i 283 (284)
T cd05038 237 ELLK--------------EGERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL 283 (284)
T ss_pred HHHH--------------cCCcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence 1111 1111111223457899999999999999999999999999765
No 251
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=4.9e-40 Score=301.25 Aligned_cols=270 Identities=28% Similarity=0.384 Sum_probs=207.5
Q ss_pred ccHHHHHHHhcCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcccHHHHHHHHHHhhcC-CCCccceee
Q 035862 62 FDMQELREATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVV-SHPNLVKLL 140 (393)
Q Consensus 62 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~ 140 (393)
+.+.++..+.++|.+...||+|+||.||+|....+ +..+++|.+.... .....+.+|+.++..+ +|||+++++
T Consensus 12 ~~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~-----~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~~h~ni~~~~ 85 (291)
T cd06639 12 LGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKD-----GSLAAVKILDPIS-DVDEEIEAEYNILQSLPNHPNVVKFY 85 (291)
T ss_pred hhcccCCCCCCCeEEEEEeecCCCeEEEEEEECCC-----CCEEEEEEecccc-cHHHHHHHHHHHHHHhcCCCCeEEEE
Confidence 44556667788999999999999999999986533 3469999886543 2345567899999988 799999999
Q ss_pred eeeecCCc-ccceEEEEEeecCCCChHHHHhh--cCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeC
Q 035862 141 GYCSTEDE-RGIQRLLVYEYMPNRSLEDRLFS--RAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLD 217 (393)
Q Consensus 141 ~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~ 217 (393)
+++...+. .....++||||+++++|.+++.. .....+++..++.++.|++.||.|||+. +++||||||+||+++
T Consensus 86 ~~~~~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~nili~ 162 (291)
T cd06639 86 GMFYKADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNN---RIIHRDVKGNNILLT 162 (291)
T ss_pred EEEEeccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEc
Confidence 99876542 22356999999999999998853 2345689999999999999999999998 999999999999999
Q ss_pred CCCceEEeeccCCccCCCCCCccccccccccCCccCccccccC-----CCCchhhHHHHHHHHHHHHhCCCccCCCCchh
Q 035862 218 GNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIETG-----HLKSQSDIWSFGVVLYEILTGRRVLERNRPTM 292 (393)
Q Consensus 218 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~DiwslGvil~elltg~~pf~~~~~~~ 292 (393)
.++.+||+|||++........ ......|+..|+|||.+... .++.++|||||||++|+|++|+.||....+..
T Consensus 163 ~~~~~kl~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~ 240 (291)
T cd06639 163 TEGGVKLVDFGVSAQLTSTRL--RRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVK 240 (291)
T ss_pred CCCCEEEeecccchhcccccc--cccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHH
Confidence 999999999999876433221 12334688899999988543 36889999999999999999999997543321
Q ss_pred hhHHHHHHhhcCcCCcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 035862 293 EQKLLEWVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKL 357 (393)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~ 357 (393)
.........+. .. ..+...+..+.+++.+||+.+|++||++.++++|.|.
T Consensus 241 --~~~~~~~~~~~-----------~~--~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~ 290 (291)
T cd06639 241 --TLFKIPRNPPP-----------TL--LHPEKWCRSFNHFISQCLIKDFEARPSVTHLLEHPFI 290 (291)
T ss_pred --HHHHHhcCCCC-----------CC--CcccccCHHHHHHHHHHhhcChhhCcCHHHHhcCccc
Confidence 11111111000 00 0112344679999999999999999999999998653
No 252
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=4.3e-40 Score=297.47 Aligned_cols=256 Identities=23% Similarity=0.300 Sum_probs=199.4
Q ss_pred cCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCC-----cccHHHHHHHHHHhhcCCCCccceeeeeeecC
Q 035862 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG-----LQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTE 146 (393)
Q Consensus 72 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 146 (393)
.+|.+.+.||+|+||.||.|.+..+ +..|++|.+.... ......+.+|+.+++.++||||+++++++.+.
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~-----~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 76 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADT-----GRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDP 76 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCC-----CcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccC
Confidence 3688999999999999999986543 3469999875321 12235677899999999999999999987665
Q ss_pred CcccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEee
Q 035862 147 DERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSD 226 (393)
Q Consensus 147 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~D 226 (393)
... .++++|||+++++|.+++... ..+++..+..++.|++.||.|||+. +++|+||||+||+++.++.++|+|
T Consensus 77 ~~~--~~~~v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~D 149 (265)
T cd06652 77 MER--TLSIFMEHMPGGSIKDQLKSY--GALTENVTRKYTRQILEGVSYLHSN---MIVHRDIKGANILRDSVGNVKLGD 149 (265)
T ss_pred CCc--eEEEEEEecCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEecCCCCEEECc
Confidence 433 568999999999999998543 4578888999999999999999998 999999999999999999999999
Q ss_pred ccCCccCCCCCCc-cccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCc
Q 035862 227 FGLAREGPTGDHT-HVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPA 305 (393)
Q Consensus 227 fg~a~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~ 305 (393)
||++......... .......++..|+|||++.+..++.++|||||||++|+|++|+.||........ ..... ..+
T Consensus 150 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~--~~~~~-~~~- 225 (265)
T cd06652 150 FGASKRLQTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAA--IFKIA-TQP- 225 (265)
T ss_pred CccccccccccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchHHH--HHHHh-cCC-
Confidence 9998754321111 012234688899999999888899999999999999999999999975432211 11111 000
Q ss_pred CCcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 035862 306 DGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLK 356 (393)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~ 356 (393)
.....+...+..+.+++.+|| .+|++||++++++++.+
T Consensus 226 ------------~~~~~~~~~~~~~~~~i~~~l-~~p~~Rp~~~~il~~~~ 263 (265)
T cd06652 226 ------------TNPVLPPHVSDHCRDFLKRIF-VEAKLRPSADELLRHTF 263 (265)
T ss_pred ------------CCCCCchhhCHHHHHHHHHHh-cChhhCCCHHHHhcCcc
Confidence 011223355678899999999 49999999999998764
No 253
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=5.6e-40 Score=296.69 Aligned_cols=254 Identities=26% Similarity=0.385 Sum_probs=199.4
Q ss_pred CCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCc------ccHHHHHHHHHHhhcCCCCccceeeeeeecC
Q 035862 73 GFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL------QGHKQWLAEVQFLGVVSHPNLVKLLGYCSTE 146 (393)
Q Consensus 73 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 146 (393)
+|.+.+.||.|+||.||+|... .+..+|+|.+..... .....+.+|+.+++.++|+||+++++++...
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~------~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 74 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTN------QGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDD 74 (265)
T ss_pred CccccceEeccCCeEEEEEEEc------CCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecC
Confidence 4788899999999999999753 233589998764321 1224577899999999999999999999876
Q ss_pred CcccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEee
Q 035862 147 DERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSD 226 (393)
Q Consensus 147 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~D 226 (393)
+ ..+++|||+.+++|.+++.. ...+++..+..++.|++.||+|||+. +++|+||+|+||++++++.++|+|
T Consensus 75 ~----~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~d 145 (265)
T cd06631 75 N----TISIFMEFVPGGSISSILNR--FGPLPEPVFCKYTKQILDGVAYLHNN---CVVHRDIKGNNVMLMPNGIIKLID 145 (265)
T ss_pred C----eEEEEEecCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHhEEECCCCeEEecc
Confidence 5 56999999999999999843 34578999999999999999999998 999999999999999999999999
Q ss_pred ccCCccCCCCCC----ccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhh
Q 035862 227 FGLAREGPTGDH----THVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQ 302 (393)
Q Consensus 227 fg~a~~~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~ 302 (393)
||++........ ........++..|+|||++.+..++.++|+|||||++|+|++|..||............. ..
T Consensus 146 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~--~~ 223 (265)
T cd06631 146 FGCARRLAWVGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIG--AH 223 (265)
T ss_pred chhhHhhhhccccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHHHHHhh--hc
Confidence 999875422111 111234568899999999998889999999999999999999999997544322211111 00
Q ss_pred cCcCCcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 035862 303 FPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLK 356 (393)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~ 356 (393)
. ......+..++.++.+++.+||..+|.+||++.+++.+.|
T Consensus 224 ~-------------~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~ 264 (265)
T cd06631 224 R-------------GLMPRLPDSFSAAAIDFVTSCLTRDQHERPSALQLLRHDF 264 (265)
T ss_pred c-------------CCCCCCCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcCCC
Confidence 0 0001112234678899999999999999999999998754
No 254
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=8.1e-40 Score=293.83 Aligned_cols=246 Identities=29% Similarity=0.471 Sum_probs=197.4
Q ss_pred cCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcccHHHHHHHHHHhhcCCCCccceeeeeeecCCcccc
Q 035862 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGI 151 (393)
Q Consensus 72 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 151 (393)
++|++.+.||+|+||.||++... +..+++|...... ....+.+|+.+++.++|||++++++++....
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~-------~~~~~iK~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~---- 72 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEYT-------GQKVAVKNIKCDV--TAQAFLEETAVMTKLHHKNLVRLLGVILHNG---- 72 (254)
T ss_pred HHceeeeeeccCCCCceEecccC-------CCceEEEeecCcc--hHHHHHHHHHHHHhCCCCCcCeEEEEEcCCC----
Confidence 46899999999999999998632 2348999886542 3456788999999999999999999886543
Q ss_pred eEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCCc
Q 035862 152 QRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAR 231 (393)
Q Consensus 152 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~ 231 (393)
.++||||+.+++|.+++.......+++..++.++.|++.||.|||+. |++||||||+||+++.++.+||+|||++.
T Consensus 73 -~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~~~H~dl~p~nili~~~~~~kl~Dfg~~~ 148 (254)
T cd05083 73 -LYIVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESK---KLVHRDLAARNILVSEDGVAKVSDFGLAR 148 (254)
T ss_pred -cEEEEECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCcEEECCCccce
Confidence 48999999999999999766555689999999999999999999998 99999999999999999999999999987
Q ss_pred cCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHh-CCCccCCCCchhhhHHHHHHhhcCcCCccc
Q 035862 232 EGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILT-GRRVLERNRPTMEQKLLEWVKQFPADGKKF 310 (393)
Q Consensus 232 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (393)
...... .....+..|+|||.+.+..++.++|+|||||++|+|++ |..||.......... ....
T Consensus 149 ~~~~~~-----~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~---~~~~-------- 212 (254)
T cd05083 149 VGSMGV-----DNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKE---CVEK-------- 212 (254)
T ss_pred eccccC-----CCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHHHH---HHhC--------
Confidence 543211 12234567999999988899999999999999999998 999997654322111 1110
Q ss_pred ccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 035862 311 SMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLK 356 (393)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~ 356 (393)
......+..++..+.+++.+||+.+|++||++.++++.+.
T Consensus 213 ------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 252 (254)
T cd05083 213 ------GYRMEPPEGCPADVYVLMTSCWETEPKKRPSFHKLREKLE 252 (254)
T ss_pred ------CCCCCCCCcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHc
Confidence 0011111234578899999999999999999999999875
No 255
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-41 Score=304.11 Aligned_cols=255 Identities=29% Similarity=0.438 Sum_probs=212.7
Q ss_pred hcCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcc---cHHHHHHHHHHhhcCCCCccceeeeeeecCC
Q 035862 71 TNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQ---GHKQWLAEVQFLGVVSHPNLVKLLGYCSTED 147 (393)
Q Consensus 71 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 147 (393)
.+.|..-++||+|+||.||-+..+.++ +.+|.|++.+.... .....++|-.||..++.+.||.+-..|.+.+
T Consensus 184 ~n~F~~~RvlGkGGFGEV~acqvraTG-----KMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd 258 (591)
T KOG0986|consen 184 KNTFRVYRVLGKGGFGEVCACQVRATG-----KMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKD 258 (591)
T ss_pred ccceeeeEEEecccccceeEEEEecch-----hhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCC
Confidence 467899999999999999999876544 46999988765322 2345678999999999999999998898888
Q ss_pred cccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeec
Q 035862 148 ERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDF 227 (393)
Q Consensus 148 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Df 227 (393)
.+|+||..|+||+|.-.|++..++.+++..++.++.+|+.||++||+. +||+||+||+|||+|+.|+++|+|+
T Consensus 259 ----~LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~---~iVYRDLKPeNILLDd~GhvRISDL 331 (591)
T KOG0986|consen 259 ----ALCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRR---RIVYRDLKPENILLDDHGHVRISDL 331 (591)
T ss_pred ----ceEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhc---ceeeccCChhheeeccCCCeEeecc
Confidence 569999999999999999888888999999999999999999999999 9999999999999999999999999
Q ss_pred cCCccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhh-HHHHHHhhcCcC
Q 035862 228 GLAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQ-KLLEWVKQFPAD 306 (393)
Q Consensus 228 g~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~-~~~~~~~~~~~~ 306 (393)
|+|.....+. .....+||.+|||||++.+..|+...|.|||||++|||+.|+.||....+.... .+-....
T Consensus 332 GLAvei~~g~---~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr~~----- 403 (591)
T KOG0986|consen 332 GLAVEIPEGK---PIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRRTL----- 403 (591)
T ss_pred ceEEecCCCC---ccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHHHh-----
Confidence 9998766544 334569999999999999999999999999999999999999999765433221 1111111
Q ss_pred CcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCC-----HHHHHHHH
Q 035862 307 GKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPT-----MNQVVESL 355 (393)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps-----~~~~l~~l 355 (393)
.-..+++...++++.+|.+.+|.+||.+|.. +.++-+|+
T Consensus 404 ----------~~~~ey~~kFS~eakslc~~LL~Kdp~~RLGcrg~ga~evk~Hp 447 (591)
T KOG0986|consen 404 ----------EDPEEYSDKFSEEAKSLCEGLLTKDPEKRLGCRGEGAQEVKEHP 447 (591)
T ss_pred ----------cchhhcccccCHHHHHHHHHHHccCHHHhccCCCcCcchhhhCc
Confidence 1123456678899999999999999999975 44666664
No 256
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=2.2e-40 Score=298.28 Aligned_cols=244 Identities=25% Similarity=0.394 Sum_probs=189.8
Q ss_pred eecccCCceEEEEEEcCCCC--CCCceEEEEEEecCCCcccHHHHHHHHHHhhcCCCCccceeeeeeecCCcccceEEEE
Q 035862 79 KIGEGGFGSVYKGTIRPLDG--RGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLV 156 (393)
Q Consensus 79 ~lg~G~~g~Vy~~~~~~~~~--~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv 156 (393)
.||.|+||.||+|....... ......+++|.+..........+.+|+.+++.++||||+++++++...+. .++|
T Consensus 2 ~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~----~~lv 77 (258)
T cd05078 2 SLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDE----SIMV 77 (258)
T ss_pred CCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCC----cEEE
Confidence 69999999999998754322 12345688888766544445677889999999999999999999987663 4899
Q ss_pred EeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCc--------eEEeecc
Q 035862 157 YEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFK--------PKLSDFG 228 (393)
Q Consensus 157 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~--------~kl~Dfg 228 (393)
|||+.+++|.+++.... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++. ++++|||
T Consensus 78 ~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g 153 (258)
T cd05078 78 QEYVKFGSLDTYLKKNK-NLINISWKLEVAKQLAWALHFLEDK---GLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPG 153 (258)
T ss_pred EecCCCCcHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEEEecccccccCCCceEEecccc
Confidence 99999999999986443 3588999999999999999999998 9999999999999987765 6999999
Q ss_pred CCccCCCCCCccccccccccCCccCcccccc-CCCCchhhHHHHHHHHHHHHhCC-CccCCCCchhhhHHHHHHhhcCcC
Q 035862 229 LAREGPTGDHTHVSTAVVGTYGYAAPEYIET-GHLKSQSDIWSFGVVLYEILTGR-RVLERNRPTMEQKLLEWVKQFPAD 306 (393)
Q Consensus 229 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslGvil~elltg~-~pf~~~~~~~~~~~~~~~~~~~~~ 306 (393)
++...... ....++..|+|||++.+ ..++.++|||||||++|+|++|. .||....+........ .
T Consensus 154 ~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~~~~~~---~---- 220 (258)
T cd05078 154 ISITVLPK------EILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKKLQFYE---D---- 220 (258)
T ss_pred cccccCCc------hhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHHHHHHH---c----
Confidence 88654321 23467889999999976 45799999999999999999995 5554433322111111 0
Q ss_pred CcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 035862 307 GKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESL 355 (393)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l 355 (393)
. ...+...+.++.+++.+||+.||++|||++++++.|
T Consensus 221 ~------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l 257 (258)
T cd05078 221 R------------HQLPAPKWTELANLINQCMDYEPDFRPSFRAIIRDL 257 (258)
T ss_pred c------------ccCCCCCcHHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence 0 011112346789999999999999999999999876
No 257
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=1.3e-39 Score=296.24 Aligned_cols=255 Identities=26% Similarity=0.378 Sum_probs=206.0
Q ss_pred cCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCC-cccHHHHHHHHHHhhcCCCCccceeeeeeecCCccc
Q 035862 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG-LQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERG 150 (393)
Q Consensus 72 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 150 (393)
..|+..+.||.|+||.||+|.+... +..|++|.+.... ......+.+|+.+++.++||||+++++++....
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~~~-----~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--- 75 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDNRT-----QQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGT--- 75 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEccC-----CEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECC---
Confidence 3578888999999999999986533 3469999887543 233456788999999999999999999998766
Q ss_pred ceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCC
Q 035862 151 IQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLA 230 (393)
Q Consensus 151 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a 230 (393)
..++||||+.+++|.+++.. ..+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||++
T Consensus 76 -~~~lv~e~~~~~~L~~~i~~---~~l~~~~~~~~~~~l~~~l~~lh~~---~ivH~dl~p~Nil~~~~~~~~l~dfg~~ 148 (277)
T cd06640 76 -KLWIIMEYLGGGSALDLLRA---GPFDEFQIATMLKEILKGLDYLHSE---KKIHRDIKAANVLLSEQGDVKLADFGVA 148 (277)
T ss_pred -EEEEEEecCCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CccCcCCChhhEEEcCCCCEEEcccccc
Confidence 56999999999999998843 3578889999999999999999998 9999999999999999999999999999
Q ss_pred ccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcCCccc
Q 035862 231 REGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKF 310 (393)
Q Consensus 231 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (393)
........ ......++..|+|||.+.+..++.++|+|||||++|+|++|..||....+.......
T Consensus 149 ~~~~~~~~--~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~------------- 213 (277)
T cd06640 149 GQLTDTQI--KRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLI------------- 213 (277)
T ss_pred eeccCCcc--ccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhhhh-------------
Confidence 76533221 123346788999999998888999999999999999999999999754432111100
Q ss_pred ccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHh
Q 035862 311 SMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQ 360 (393)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~~~ 360 (393)
...........++..+.+++.+||+.+|++||++.+++.+.+....
T Consensus 214 ----~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~ 259 (277)
T cd06640 214 ----PKNNPPTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKHKFIVKN 259 (277)
T ss_pred ----hcCCCCCCchhhhHHHHHHHHHHcccCcccCcCHHHHHhChHhhhc
Confidence 0011122334567889999999999999999999999999887544
No 258
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=2.8e-40 Score=302.95 Aligned_cols=255 Identities=26% Similarity=0.387 Sum_probs=202.0
Q ss_pred CcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcccHHHHHHHHHHhhcCCCCccceeeeeeecCCcccceE
Q 035862 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQR 153 (393)
Q Consensus 74 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 153 (393)
|.....||+|+||.||++....+ +..|++|.+..........+.+|+.+++.++||||+++++.+...+ ..
T Consensus 24 ~~~~~~lg~g~~g~v~~~~~~~~-----~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~----~~ 94 (292)
T cd06658 24 LDSFIKIGEGSTGIVCIATEKHT-----GKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGD----EL 94 (292)
T ss_pred HhhhhcccCCCCeEEEEEEECCC-----CCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCC----eE
Confidence 44456799999999999986433 3469999987655455567889999999999999999999988766 56
Q ss_pred EEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCCccC
Q 035862 154 LLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREG 233 (393)
Q Consensus 154 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~ 233 (393)
++||||+++++|.+++.. ..+++..++.++.||+.||.|||++ +++||||||+||++++++.++|+|||++...
T Consensus 95 ~lv~e~~~~~~L~~~~~~---~~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~ 168 (292)
T cd06658 95 WVVMEFLEGGALTDIVTH---TRMNEEQIATVCLSVLRALSYLHNQ---GVIHRDIKSDSILLTSDGRIKLSDFGFCAQV 168 (292)
T ss_pred EEEEeCCCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEccCcchhhc
Confidence 999999999999998732 3578999999999999999999998 9999999999999999999999999998754
Q ss_pred CCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcCCcccccc
Q 035862 234 PTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKFSMM 313 (393)
Q Consensus 234 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (393)
..... ......|+..|+|||.+.+..++.++||||||+++|||++|..||......... .......+
T Consensus 169 ~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~--~~~~~~~~--------- 235 (292)
T cd06658 169 SKEVP--KRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAM--RRIRDNLP--------- 235 (292)
T ss_pred ccccc--cCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH--HHHHhcCC---------
Confidence 32211 123456889999999998888999999999999999999999999765432211 11111110
Q ss_pred cCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHh
Q 035862 314 IDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQ 360 (393)
Q Consensus 314 ~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~~~ 360 (393)
.... .....+..+.+++.+||..||.+|||+.+++++.+....
T Consensus 236 --~~~~--~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~~~~ 278 (292)
T cd06658 236 --PRVK--DSHKVSSVLRGFLDLMLVREPSQRATAQELLQHPFLKLA 278 (292)
T ss_pred --Cccc--cccccCHHHHHHHHHHccCChhHCcCHHHHhhChhhhcc
Confidence 0000 011245678899999999999999999999999877653
No 259
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=1.7e-39 Score=292.08 Aligned_cols=256 Identities=36% Similarity=0.571 Sum_probs=202.1
Q ss_pred CcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcc-cHHHHHHHHHHhhcCCCCccceeeeeeecCCcccce
Q 035862 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQ-GHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQ 152 (393)
Q Consensus 74 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 152 (393)
+++.+.||.|+||.||++.+...+. .....|++|.+...... ....+..|+.++..++|+||+++++++...+ .
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~-~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~----~ 75 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSG-EKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEE----P 75 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCC-CCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCC----e
Confidence 3567889999999999999764331 23467999999765433 4567889999999999999999999998775 4
Q ss_pred EEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCCcc
Q 035862 153 RLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLARE 232 (393)
Q Consensus 153 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~ 232 (393)
.+++|||+.+++|.+++.......+++..+..++.|++.||++||+. +++|+||+|+||++++++.++|+|||++..
T Consensus 76 ~~~i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~---~~~h~dl~~~nil~~~~~~~~l~dfg~~~~ 152 (258)
T smart00219 76 LMIVMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESK---NFIHRDLAARNCLVGENLVVKISDFGLSRD 152 (258)
T ss_pred eEEEEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcC---CeeecccccceEEEccCCeEEEcccCCcee
Confidence 59999999999999998654433389999999999999999999998 999999999999999999999999999976
Q ss_pred CCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHh-CCCccCCCCchhhhHHHHHHhhcCcCCcccc
Q 035862 233 GPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILT-GRRVLERNRPTMEQKLLEWVKQFPADGKKFS 311 (393)
Q Consensus 233 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (393)
......... ....++..|+|||.+.+..++.++||||||+++|+|++ |..||...... ..........
T Consensus 153 ~~~~~~~~~-~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~---~~~~~~~~~~------- 221 (258)
T smart00219 153 LYDDDYYKK-KGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNE---EVLEYLKKGY------- 221 (258)
T ss_pred ccccccccc-ccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHH---HHHHHHhcCC-------
Confidence 544322211 12336789999999988889999999999999999998 78888653221 1111111100
Q ss_pred cccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 035862 312 MMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESL 355 (393)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l 355 (393)
....+...+.++.+++.+||+.||++|||+.++++.|
T Consensus 222 -------~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 222 -------RLPKPENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred -------CCCCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 0011112567899999999999999999999998764
No 260
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=1.3e-39 Score=293.55 Aligned_cols=254 Identities=28% Similarity=0.428 Sum_probs=201.4
Q ss_pred hcCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcccHHHHHHHHHHhhcCCCCccceeeeeeecCCccc
Q 035862 71 TNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERG 150 (393)
Q Consensus 71 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 150 (393)
.++|.+.+.||+|+||.||+|.+... ..+++|.+.... .....+.+|+.+++.++|+||+++++++.. .
T Consensus 5 ~~~~~~~~~lg~g~~~~vy~~~~~~~------~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~--- 73 (260)
T cd05073 5 RESLKLEKKLGAGQFGEVWMATYNKH------TKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVTK-E--- 73 (260)
T ss_pred ccceeEEeEecCccceEEEEEEecCC------ccEEEEecCCCh-hHHHHHHHHHHHHHhcCCCCcceEEEEEcC-C---
Confidence 45799999999999999999975422 248899877543 234668889999999999999999998876 3
Q ss_pred ceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCC
Q 035862 151 IQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLA 230 (393)
Q Consensus 151 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a 230 (393)
..+++|||+.+++|.+++.......+++..+..++.|++.||.|||+. +++|+||||+||+++.++.+||+|||.+
T Consensus 74 -~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~~~~ 149 (260)
T cd05073 74 -PIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLA 149 (260)
T ss_pred -CeEEEEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCCcce
Confidence 458999999999999999765556688889999999999999999998 9999999999999999999999999998
Q ss_pred ccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHh-CCCccCCCCchhhhHHHHHHhhcCcCCcc
Q 035862 231 REGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILT-GRRVLERNRPTMEQKLLEWVKQFPADGKK 309 (393)
Q Consensus 231 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 309 (393)
......... ......++..|+|||++....++.++|+|||||++|++++ |..||........ ....... .
T Consensus 150 ~~~~~~~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~---~~~~~~~----~- 220 (260)
T cd05073 150 RVIEDNEYT-AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEV---IRALERG----Y- 220 (260)
T ss_pred eeccCCCcc-cccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHH---HHHHhCC----C-
Confidence 764332211 1222345677999999988889999999999999999999 8999975433211 1111110 0
Q ss_pred cccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 035862 310 FSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKL 357 (393)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~ 357 (393)
........+.++.+++.+||+.+|++||++.++++.|+.
T Consensus 221 ---------~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~ 259 (260)
T cd05073 221 ---------RMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD 259 (260)
T ss_pred ---------CCCCcccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 001112345779999999999999999999999998864
No 261
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=4.9e-40 Score=301.14 Aligned_cols=248 Identities=25% Similarity=0.376 Sum_probs=202.5
Q ss_pred cCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCc---ccHHHHHHHHHHhhcCCCCccceeeeeeecCCc
Q 035862 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL---QGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDE 148 (393)
Q Consensus 72 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 148 (393)
++|++.+.||+|+||.||++.+... +..+++|.+..... .....+.+|+++++.++||||+++++++...+
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~-----~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~- 74 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGS-----GKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDS- 74 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCC-----CCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCC-
Confidence 4689999999999999999997543 34699998865321 23456788999999999999999999987766
Q ss_pred ccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeecc
Q 035862 149 RGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFG 228 (393)
Q Consensus 149 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg 228 (393)
.+++||||+++++|.+++... ..+++..+..++.|++.||.|||+. |++|+||+|+||++++++.+||+|||
T Consensus 75 ---~~~~v~e~~~~~~L~~~~~~~--~~l~~~~~~~~~~qil~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~dfg 146 (290)
T cd05580 75 ---NLYLVMEYVPGGELFSHLRKS--GRFPEPVARFYAAQVVLALEYLHSL---DIVYRDLKPENLLLDSDGYIKITDFG 146 (290)
T ss_pred ---eEEEEEecCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEeeCC
Confidence 569999999999999998543 5689999999999999999999998 99999999999999999999999999
Q ss_pred CCccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcCCc
Q 035862 229 LAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGK 308 (393)
Q Consensus 229 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 308 (393)
++...... .....+++.|+|||.+.+..++.++||||||+++|+|++|..||........ .......
T Consensus 147 ~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~--~~~~~~~------ 213 (290)
T cd05580 147 FAKRVKGR-----TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQI--YEKILEG------ 213 (290)
T ss_pred CccccCCC-----CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHhcC------
Confidence 98765432 2345688999999999888899999999999999999999999976542211 1111100
Q ss_pred ccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHHHH
Q 035862 309 KFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERP-----TMNQVVESLK 356 (393)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rp-----s~~~~l~~l~ 356 (393)
....+...+..+.+++.+||..||.+|+ +++++++|.+
T Consensus 214 ----------~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~~~ 256 (290)
T cd05580 214 ----------KVRFPSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNHPW 256 (290)
T ss_pred ----------CccCCccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHcCcc
Confidence 0011122357889999999999999999 8999999876
No 262
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=7.6e-40 Score=296.45 Aligned_cols=254 Identities=34% Similarity=0.543 Sum_probs=197.9
Q ss_pred eecccCCceEEEEEEcCCCC-CCCceEEEEEEecCCC-cccHHHHHHHHHHhhcCCCCccceeeeeeecCCcccceEEEE
Q 035862 79 KIGEGGFGSVYKGTIRPLDG-RGEPLVVAVKKLNNHG-LQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLV 156 (393)
Q Consensus 79 ~lg~G~~g~Vy~~~~~~~~~-~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv 156 (393)
.||+|+||.||+|.+..... ......+++|.+.... ......+.+|+.+++.++||||+++++++...+ ..++|
T Consensus 2 ~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----~~~~v 77 (269)
T cd05044 2 FLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNE----PQYII 77 (269)
T ss_pred ccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCC----CeEEE
Confidence 59999999999998754331 2234578999876542 234567889999999999999999999987665 45999
Q ss_pred EeecCCCChHHHHhhcC-----CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCC-----ceEEee
Q 035862 157 YEYMPNRSLEDRLFSRA-----QPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNF-----KPKLSD 226 (393)
Q Consensus 157 ~e~~~~~~L~~~l~~~~-----~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~-----~~kl~D 226 (393)
|||+.+++|.+++.... ...+++..++.++.|++.||.|||+. +++|+||||+||+++.++ .++|+|
T Consensus 78 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~~~~~~l~d 154 (269)
T cd05044 78 MELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQM---HFIHRDLAARNCLVSEKGYDADRVVKIGD 154 (269)
T ss_pred EeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhC---CcccCCCChheEEEecCCCCCCcceEECC
Confidence 99999999999996432 23478899999999999999999998 999999999999999887 899999
Q ss_pred ccCCccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHh-CCCccCCCCchhhhHHHHHHhhcCc
Q 035862 227 FGLAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILT-GRRVLERNRPTMEQKLLEWVKQFPA 305 (393)
Q Consensus 227 fg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~ 305 (393)
||++................++..|+|||.+.+..++.++|||||||++|+|++ |..||......... .....
T Consensus 155 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~~---~~~~~--- 228 (269)
T cd05044 155 FGLARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEVL---QHVTA--- 228 (269)
T ss_pred cccccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHHHHH---HHHhc---
Confidence 999876533322222223355678999999999999999999999999999998 99999754332111 11100
Q ss_pred CCcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 035862 306 DGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLK 356 (393)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~ 356 (393)
+ .....+...+..+.+++.+||..+|.+||++.++++.|.
T Consensus 229 -~----------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 268 (269)
T cd05044 229 -G----------GRLQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQ 268 (269)
T ss_pred -C----------CccCCcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 0 011112245678999999999999999999999999875
No 263
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=4.1e-40 Score=300.69 Aligned_cols=267 Identities=25% Similarity=0.328 Sum_probs=197.4
Q ss_pred CCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCc--ccHHHHHHHHHHhhcCCCCccceeeeeeecCCccc
Q 035862 73 GFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL--QGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERG 150 (393)
Q Consensus 73 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 150 (393)
+|++.+.||+|+||.||+|.+..++ ..+++|.+..... .....+.+|+.+++.++||||+++++++....
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g-----~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~--- 72 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETH-----EIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDK--- 72 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCC-----cEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCC---
Confidence 4888899999999999999975443 3589998864321 22345678999999999999999999987665
Q ss_pred ceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCC
Q 035862 151 IQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLA 230 (393)
Q Consensus 151 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a 230 (393)
..++|+||+. ++|.+++... ...+++..++.++.||+.||.|||+. +++||||||+||+++.++.+||+|||++
T Consensus 73 -~~~lv~e~~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dl~~~nil~~~~~~~~l~dfg~~ 146 (284)
T cd07839 73 -KLTLVFEYCD-QDLKKYFDSC-NGDIDPEIVKSFMFQLLKGLAFCHSH---NVLHRDLKPQNLLINKNGELKLADFGLA 146 (284)
T ss_pred -ceEEEEecCC-CCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEcCCCcEEECccchh
Confidence 5699999996 5888877543 34589999999999999999999998 9999999999999999999999999998
Q ss_pred ccCCCCCCccccccccccCCccCccccccC-CCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCc-CC-
Q 035862 231 REGPTGDHTHVSTAVVGTYGYAAPEYIETG-HLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPA-DG- 307 (393)
Q Consensus 231 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~-~~- 307 (393)
........ ......++..|+|||++.+. .++.++|||||||++|+|++|..||.......+. +......... +.
T Consensus 147 ~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~-~~~~~~~~~~~~~~ 223 (284)
T cd07839 147 RAFGIPVR--CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQ-LKRIFRLLGTPTEE 223 (284)
T ss_pred hccCCCCC--CcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHH-HHHHHHHhCCCChH
Confidence 75433221 12345678899999988764 4789999999999999999999886543332211 1111100000 00
Q ss_pred -----------cccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 035862 308 -----------KKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLK 356 (393)
Q Consensus 308 -----------~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~ 356 (393)
.............+....++.++.+|+.+||+.||.+|||+.++++|.|
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h~~ 283 (284)
T cd07839 224 SWPGVSKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQHPY 283 (284)
T ss_pred HhHHhhhcccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcCCC
Confidence 0000000000001112235688999999999999999999999998865
No 264
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=3.6e-40 Score=300.02 Aligned_cols=253 Identities=26% Similarity=0.372 Sum_probs=201.8
Q ss_pred CCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCC-cccHHHHHHHHHHhhcCCCCccceeeeeeecCCcccc
Q 035862 73 GFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG-LQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGI 151 (393)
Q Consensus 73 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 151 (393)
.|+..+.||.|+||.||+|.+.. .+..|++|.+.... ......+.+|+.+++.++||||+++++++...+
T Consensus 5 ~y~~~~~l~~g~~~~vy~~~~~~-----~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~---- 75 (277)
T cd06642 5 LFTKLERIGKGSFGEVYKGIDNR-----TKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGT---- 75 (277)
T ss_pred HHHHHHHhcCCCCeeEEEEEEcC-----CCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCC----
Confidence 46777889999999999998643 33469999887543 233456788999999999999999999988765
Q ss_pred eEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCCc
Q 035862 152 QRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAR 231 (393)
Q Consensus 152 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~ 231 (393)
..++||||+.+++|.+++.. ..+++..++.++.|++.|+.|||++ +++|+||+|+||++++++.++|+|||++.
T Consensus 76 ~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~---~ivH~dl~p~ni~i~~~~~~~l~dfg~~~ 149 (277)
T cd06642 76 KLWIIMEYLGGGSALDLLKP---GPLEETYIATILREILKGLDYLHSE---RKIHRDIKAANVLLSEQGDVKLADFGVAG 149 (277)
T ss_pred ceEEEEEccCCCcHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHhcC---CeeccCCChheEEEeCCCCEEEccccccc
Confidence 45999999999999998842 4588999999999999999999998 99999999999999999999999999987
Q ss_pred cCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcCCcccc
Q 035862 232 EGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKFS 311 (393)
Q Consensus 232 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (393)
....... ......++..|+|||.+.+..++.++|+|||||++|+|++|..||....+.... ...
T Consensus 150 ~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~---~~~----------- 213 (277)
T cd06642 150 QLTDTQI--KRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVL---FLI----------- 213 (277)
T ss_pred cccCcch--hhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHH---hhh-----------
Confidence 6443221 123346788999999999889999999999999999999999998644322111 000
Q ss_pred cccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHH
Q 035862 312 MMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAV 359 (393)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~~ 359 (393)
...........++.++.+++.+||+.+|++||++.+++.|.+...
T Consensus 214 ---~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~ 258 (277)
T cd06642 214 ---PKNSPPTLEGQYSKPFKEFVEACLNKDPRFRPTAKELLKHKFITR 258 (277)
T ss_pred ---hcCCCCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHHhHHHHH
Confidence 000111122235677899999999999999999999999987543
No 265
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=1.4e-39 Score=293.63 Aligned_cols=254 Identities=23% Similarity=0.354 Sum_probs=203.6
Q ss_pred CCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCC--cccHHHHHHHHHHhhcCCCCccceeeeeeecCCccc
Q 035862 73 GFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG--LQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERG 150 (393)
Q Consensus 73 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 150 (393)
+|++.+.||.|+||.||+|.+..++ ..+++|.+.... ......+..|+.+++.++||||+++++++......
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~-----~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~- 74 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDG-----KILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQ- 74 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCC-----CEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCC-
Confidence 4888999999999999999865433 468999886542 23345677899999999999999999987654433
Q ss_pred ceEEEEEeecCCCChHHHHhhc--CCCCCCHHHHHHHHHHHHHHHHHhh-----cCCCCCeEeccCCCCCeEeCCCCceE
Q 035862 151 IQRLLVYEYMPNRSLEDRLFSR--AQPTLPWKTRLEIILGAAEGLAYLH-----EGLEIQVIYRDFKTSNVLLDGNFKPK 223 (393)
Q Consensus 151 ~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~i~~ql~~~l~~LH-----~~~~~~ivH~Dikp~NIll~~~~~~k 223 (393)
..+++|||+.+++|.+++... ....+++..++.++.|++.||.||| +. +++|+||+|+||++++++.+|
T Consensus 75 -~~~~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~---~i~h~dl~p~nili~~~~~~k 150 (265)
T cd08217 75 -TLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGN---TVLHRDLKPANIFLDANNNVK 150 (265)
T ss_pred -EEEEEehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccC---cceecCCCHHHEEEecCCCEE
Confidence 568999999999999998543 2456899999999999999999999 76 999999999999999999999
Q ss_pred EeeccCCccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhc
Q 035862 224 LSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQF 303 (393)
Q Consensus 224 l~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~ 303 (393)
|+|||++........ ......+++.|+|||.+.+..++.++|+||||+++|+|++|..||...... .........
T Consensus 151 l~d~g~~~~~~~~~~--~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~---~~~~~~~~~ 225 (265)
T cd08217 151 LGDFGLAKILGHDSS--FAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQL---QLASKIKEG 225 (265)
T ss_pred EecccccccccCCcc--cccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCHH---HHHHHHhcC
Confidence 999999987544322 123457899999999999888999999999999999999999999865421 122211111
Q ss_pred CcCCcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 035862 304 PADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESL 355 (393)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l 355 (393)
.....+...+..+.+++.+||+.+|++||++.+++++.
T Consensus 226 --------------~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~~ 263 (265)
T cd08217 226 --------------KFRRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQLP 263 (265)
T ss_pred --------------CCCCCccccCHHHHHHHHHHccCCcccCCCHHHHhhCC
Confidence 01112234567899999999999999999999999874
No 266
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=2.2e-39 Score=296.37 Aligned_cols=264 Identities=27% Similarity=0.377 Sum_probs=205.7
Q ss_pred cCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCc-ccHHHHHHHHHHhhcCCCCccceeeeeeecCCccc
Q 035862 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL-QGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERG 150 (393)
Q Consensus 72 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 150 (393)
++|+..+.||.|++|.||+|.+.. .+..+++|.+..... .....+.+|+++++.++||||+++++++...+..
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~-----~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~- 74 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKN-----TGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSS- 74 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECC-----CCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCC-
Confidence 468899999999999999999753 345699998875432 3456688999999999999999999998765543
Q ss_pred ceEEEEEeecCCCChHHHHhh--cCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeecc
Q 035862 151 IQRLLVYEYMPNRSLEDRLFS--RAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFG 228 (393)
Q Consensus 151 ~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg 228 (393)
.+++||||+++++|.+++.. .....+++..+..++.|++.||.|||+. +++|+||+|+||++++++.++|+|||
T Consensus 75 -~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~---~i~H~dl~~~nil~~~~~~~~l~dfg 150 (287)
T cd06621 75 -SIGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSR---KIIHRDIKPSNILLTRKGQVKLCDFG 150 (287)
T ss_pred -eEEEEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecCCeEEEeecc
Confidence 56999999999999988743 2345688999999999999999999998 99999999999999999999999999
Q ss_pred CCccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCch--hhhHHHHHHhhcCcC
Q 035862 229 LAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPT--MEQKLLEWVKQFPAD 306 (393)
Q Consensus 229 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~--~~~~~~~~~~~~~~~ 306 (393)
++....... .....++..|+|||.+.+..++.++|||||||++|+|++|..||...... .......+.......
T Consensus 151 ~~~~~~~~~----~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 226 (287)
T cd06621 151 VSGELVNSL----AGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNP 226 (287)
T ss_pred ccccccccc----cccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCCch
Confidence 986543221 12345788999999999999999999999999999999999999765321 111222222211100
Q ss_pred CcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 035862 307 GKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKL 357 (393)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~ 357 (393)
. +... .......++.+.+|+.+||..+|.+|||+.+++++.|.
T Consensus 227 --~----~~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~~~~ 269 (287)
T cd06621 227 --E----LKDE--PGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEHPWI 269 (287)
T ss_pred --h----hccC--CCCCCchHHHHHHHHHHHcCCCcccCCCHHHHHhCccc
Confidence 0 0000 00001246789999999999999999999999999886
No 267
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=2.1e-39 Score=290.52 Aligned_cols=248 Identities=31% Similarity=0.494 Sum_probs=195.2
Q ss_pred ceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcc-cHHHHHHHHHHhhcCCCCccceeeeeeecCCcccceEEEE
Q 035862 78 LKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQ-GHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLV 156 (393)
Q Consensus 78 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv 156 (393)
++||.|+||.||+|.+.. + ..|++|.+...... ....+.+|+.+++.++||||+++++++.... ..++|
T Consensus 1 ~~lg~g~~g~v~~~~~~~-~-----~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~----~~~~v 70 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKG-N-----TEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQ----PIYIV 70 (251)
T ss_pred CccccCCCceEEEEEEeC-C-----CcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCC----CeEEE
Confidence 369999999999998654 2 35999988765433 4456889999999999999999999988776 45999
Q ss_pred EeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCCccCCCC
Q 035862 157 YEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTG 236 (393)
Q Consensus 157 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~ 236 (393)
|||+.+++|.+++.... ..+++..+..++.+++.||.|||++ +++||||+|+||+++.++.++|+|||++......
T Consensus 71 ~e~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~~~~~l~~lH~~---~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~ 146 (251)
T cd05041 71 MELVPGGSLLTFLRKKK-NRLTVKKLLQMSLDAAAGMEYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSREEEGG 146 (251)
T ss_pred EEcCCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhC---CEehhhcCcceEEEcCCCcEEEeeccccccccCC
Confidence 99999999999986443 3578899999999999999999999 9999999999999999999999999998754322
Q ss_pred CCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHh-CCCccCCCCchhhhHHHHHHhhcCcCCcccccccC
Q 035862 237 DHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILT-GRRVLERNRPTMEQKLLEWVKQFPADGKKFSMMID 315 (393)
Q Consensus 237 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (393)
..........++..|+|||.+.+..++.++|+|||||++|+|++ |..||............. ..
T Consensus 147 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~~---~~------------ 211 (251)
T cd05041 147 IYTVSDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIE---SG------------ 211 (251)
T ss_pred cceeccccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHHHh---cC------------
Confidence 11111112234567999999988899999999999999999999 888886554322211111 10
Q ss_pred cccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 035862 316 PRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLK 356 (393)
Q Consensus 316 ~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~ 356 (393)
.....+..++..+.+++.+||+.+|.+||++.++++.|.
T Consensus 212 --~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~ 250 (251)
T cd05041 212 --YRMPAPQLCPEEIYRLMLQCWAYDPENRPSFSEIYNELQ 250 (251)
T ss_pred --CCCCCCccCCHHHHHHHHHHhccChhhCcCHHHHHHHhh
Confidence 000112234578999999999999999999999999875
No 268
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=2.1e-39 Score=291.74 Aligned_cols=243 Identities=26% Similarity=0.450 Sum_probs=190.0
Q ss_pred ceecccCCceEEEEEEcCCCC-----CCCceEEEEEEecCCCcccHHHHHHHHHHhhcCCCCccceeeeeeecCCcccce
Q 035862 78 LKIGEGGFGSVYKGTIRPLDG-----RGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQ 152 (393)
Q Consensus 78 ~~lg~G~~g~Vy~~~~~~~~~-----~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 152 (393)
+.||+|+||.||+|.+..... ......+++|.+...... ...+.+|+.+++.++||||+++++++.. + .
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~----~ 74 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVR-D----E 74 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEec-C----C
Confidence 369999999999999865441 223346788877654433 5678899999999999999999999877 3 3
Q ss_pred EEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCC-------ceEEe
Q 035862 153 RLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNF-------KPKLS 225 (393)
Q Consensus 153 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~-------~~kl~ 225 (393)
.++||||+.+++|.+++..... .+++..+..++.||+.||.|||++ +++||||||+|||++.++ .+||+
T Consensus 75 ~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dlkp~Nill~~~~~~~~~~~~~kl~ 150 (259)
T cd05037 75 NIMVEEYVKFGPLDVFLHREKN-NVSLHWKLDVAKQLASALHYLEDK---KLVHGNVCGKNILVARYGLNEGYVPFIKLS 150 (259)
T ss_pred cEEEEEcCCCCcHHHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHhhC---CeecccCccceEEEecCccccCCceeEEeC
Confidence 4899999999999999864432 688999999999999999999998 999999999999999888 79999
Q ss_pred eccCCccCCCCCCccccccccccCCccCccccccC--CCCchhhHHHHHHHHHHHHh-CCCccCCCCchhhhHHHHHHhh
Q 035862 226 DFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIETG--HLKSQSDIWSFGVVLYEILT-GRRVLERNRPTMEQKLLEWVKQ 302 (393)
Q Consensus 226 Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DiwslGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~ 302 (393)
|||++..... .....++..|+|||++.+. .++.++||||||+++|+|++ |..||............. .
T Consensus 151 Dfg~a~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~~~~~---~ 221 (259)
T cd05037 151 DPGIPITVLS------REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKERFYQ---D 221 (259)
T ss_pred CCCccccccc------ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHHHHHh---c
Confidence 9999876433 1234567789999999776 78999999999999999999 577776543221111111 0
Q ss_pred cCcCCcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 035862 303 FPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESL 355 (393)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l 355 (393)
... ... .....+.+++.+||..+|.+||++.++++.|
T Consensus 222 ----~~~--------~~~----~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l 258 (259)
T cd05037 222 ----QHR--------LPM----PDCAELANLINQCWTYDPTKRPSFRAILRDL 258 (259)
T ss_pred ----CCC--------CCC----CCchHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence 000 000 0116789999999999999999999999876
No 269
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-40 Score=314.73 Aligned_cols=279 Identities=28% Similarity=0.406 Sum_probs=211.0
Q ss_pred CcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCC-cccHHHHHHHHHHhhcCCCCccceeeeeeecCCc--cc
Q 035862 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG-LQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDE--RG 150 (393)
Q Consensus 74 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~--~~ 150 (393)
+...+.||+|+||.||+|+++.++. .||||.++... ....+...+|+++|++++|||||+++++-.+... ..
T Consensus 15 W~~~e~LG~Ga~g~V~rgrnketG~-----~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~ 89 (732)
T KOG4250|consen 15 WEMDERLGKGAFGNVYRGRNKETGR-----LVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVT 89 (732)
T ss_pred eeehhhhcCCccceeeeeccccccc-----chhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCccc
Confidence 4455679999999999999765554 59999998753 3445678899999999999999999987655441 12
Q ss_pred ceEEEEEeecCCCChHHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeC--CCCc--eEEe
Q 035862 151 IQRLLVYEYMPNRSLEDRLFSRA-QPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLD--GNFK--PKLS 225 (393)
Q Consensus 151 ~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~--~~~~--~kl~ 225 (393)
....+|||||.||+|...+.+.+ ..++++...+.++.+++.||.|||.+ ||+||||||+||++- .+|+ .||+
T Consensus 90 ~~~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn---~IvHRDlKP~NIvl~~Gedgq~IyKLt 166 (732)
T KOG4250|consen 90 RLPVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLREN---GIVHRDLKPGNIVLQIGEDGQSIYKLT 166 (732)
T ss_pred ccceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHc---CceeccCCCCcEEEeecCCCceEEeee
Confidence 35689999999999999996543 46799999999999999999999999 999999999999993 3344 7999
Q ss_pred eccCCccCCCCCCccccccccccCCccCccccc-cCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhh-hHHHHHHhhc
Q 035862 226 DFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIE-TGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTME-QKLLEWVKQF 303 (393)
Q Consensus 226 Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~-~~~~~~~~~~ 303 (393)
|||.|+...... ...+.+||..|++||++. .+.|+..+|.|||||++|++.||..||.++..... ..+.......
T Consensus 167 DfG~Arel~d~s---~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~~~~~~tk 243 (732)
T KOG4250|consen 167 DFGAARELDDNS---LFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGPKNNKEIMWHIITK 243 (732)
T ss_pred cccccccCCCCC---eeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCccccchhhhhhhcc
Confidence 999999876554 567899999999999998 48899999999999999999999999977644321 1111111111
Q ss_pred CcCCc----------ccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCC--CHHHHHHHHHHHHhhhc
Q 035862 304 PADGK----------KFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERP--TMNQVVESLKLAVQESE 363 (393)
Q Consensus 304 ~~~~~----------~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rp--s~~~~l~~l~~~~~~~~ 363 (393)
+.++. .+..-..=+............+..++..+|..+|++|. ...+....+..++....
T Consensus 244 kp~~v~i~~~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~~~~~~~~Fa~~~dIL~~~v 315 (732)
T KOG4250|consen 244 KPSGVAIGAQEEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRGHEGFDRFFAEVDDILNLKV 315 (732)
T ss_pred CCCceeEeeecccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhCCCCcchHHHHHHHHHhhhe
Confidence 11110 00000000012222234456677899999999999999 88888888888876543
No 270
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=1.4e-39 Score=292.35 Aligned_cols=251 Identities=25% Similarity=0.395 Sum_probs=201.7
Q ss_pred CCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCC--cccHHHHHHHHHHhhcCCCCccceeeeeeecCCccc
Q 035862 73 GFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG--LQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERG 150 (393)
Q Consensus 73 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 150 (393)
+|+..+.||+|+||.||++..... +..+++|.+.... ......+.+|+.+++.++|||++++++.+...+
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~-----~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~--- 72 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKAD-----QKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDK--- 72 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCC-----CcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCC---
Confidence 588899999999999999986543 3469999887543 233566788999999999999999999887665
Q ss_pred ceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCC-CceEEeeccC
Q 035862 151 IQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGN-FKPKLSDFGL 229 (393)
Q Consensus 151 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~-~~~kl~Dfg~ 229 (393)
..++||||+.+++|.+++.......+++..+..++.|++.||.|||++ +++|+||+|+||+++++ +.+||+|||+
T Consensus 73 -~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~~l~d~~~ 148 (256)
T cd08220 73 -ALMIVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTK---LILHRDLKTQNILLDKHKMVVKIGDFGI 148 (256)
T ss_pred -EEEEEEecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEccCCC
Confidence 569999999999999999765556689999999999999999999998 99999999999999865 4589999999
Q ss_pred CccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcCCcc
Q 035862 230 AREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKK 309 (393)
Q Consensus 230 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 309 (393)
+....... ......++..|+|||.+.+..++.++||||||+++|+|++|..||........ ........
T Consensus 149 ~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~--~~~~~~~~------ 217 (256)
T cd08220 149 SKILSSKS---KAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPAL--VLKIMSGT------ 217 (256)
T ss_pred ceecCCCc---cccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHHH--HHHHHhcC------
Confidence 97654322 12235688899999999988899999999999999999999999976543211 11111100
Q ss_pred cccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 035862 310 FSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESL 355 (393)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l 355 (393)
....+..++.++.+++.+||..+|.+|||+.+++.+.
T Consensus 218 ---------~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~~p 254 (256)
T cd08220 218 ---------FAPISDRYSPDLRQLILSMLNLDPSKRPQLSQIMAQP 254 (256)
T ss_pred ---------CCCCCCCcCHHHHHHHHHHccCChhhCCCHHHHhhCC
Confidence 0011123467899999999999999999999999874
No 271
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=1e-39 Score=296.21 Aligned_cols=258 Identities=26% Similarity=0.394 Sum_probs=198.0
Q ss_pred CCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcc----------cHHHHHHHHHHhhcCCCCccceeeee
Q 035862 73 GFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQ----------GHKQWLAEVQFLGVVSHPNLVKLLGY 142 (393)
Q Consensus 73 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~----------~~~~~~~E~~~l~~l~h~niv~~~~~ 142 (393)
+|...+.||.|+||.||+|....+ +..+++|.+...... ..+.+.+|+.+++.++|||+++++++
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~-----~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~ 76 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTT-----GEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGF 76 (272)
T ss_pred ceeecceecccCceEEEEEeecCC-----CceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEE
Confidence 477888999999999999986433 346999987532110 12356789999999999999999999
Q ss_pred eecCCcccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCce
Q 035862 143 CSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKP 222 (393)
Q Consensus 143 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~ 222 (393)
+...+ ..++||||+.+++|.+++... ..+++..+..++.|++.||.|||++ +++||||+|+||+++.++.+
T Consensus 77 ~~~~~----~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~~~nil~~~~~~~ 147 (272)
T cd06629 77 ETTEE----YLSIFLEYVPGGSIGSCLRTY--GRFEEQLVRFFTEQVLEGLAYLHSK---GILHRDLKADNLLVDADGIC 147 (272)
T ss_pred eccCC----ceEEEEecCCCCcHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHhhC---CeeecCCChhhEEEcCCCeE
Confidence 87765 459999999999999998543 5688999999999999999999998 99999999999999999999
Q ss_pred EEeeccCCccCCCCCCccccccccccCCccCccccccCC--CCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHH
Q 035862 223 KLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIETGH--LKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWV 300 (393)
Q Consensus 223 kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~ 300 (393)
+|+|||++................|+..|+|||.+.... ++.++|+||||+++|++++|..||........ .....
T Consensus 148 ~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~--~~~~~ 225 (272)
T cd06629 148 KISDFGISKKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAA--MFKLG 225 (272)
T ss_pred EEeeccccccccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHH--HHHhh
Confidence 999999997643322221223456888999999987654 78999999999999999999999964332211 11100
Q ss_pred hhcCcCCcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 035862 301 KQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLK 356 (393)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~ 356 (393)
. .. ............++..+.+++.+||..+|.+||++.+++.|.|
T Consensus 226 ~----~~------~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~ 271 (272)
T cd06629 226 N----KR------SAPPIPPDVSMNLSPVALDFLNACFTINPDNRPTARELLQHPF 271 (272)
T ss_pred c----cc------cCCcCCccccccCCHHHHHHHHHHhcCChhhCCCHHHHhhCCC
Confidence 0 00 0001111112235688999999999999999999999998854
No 272
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=6.8e-40 Score=299.72 Aligned_cols=270 Identities=26% Similarity=0.387 Sum_probs=203.0
Q ss_pred cCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCC--cccHHHHHHHHHHhhcCCCCccceeeeeeecCCcc
Q 035862 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG--LQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDER 149 (393)
Q Consensus 72 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 149 (393)
++|++.+.||+|+||.||+|.+..++ ..|++|.+.... ......+.+|+++++.++|+||+++++++...+
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~-----~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-- 73 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATG-----EIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKG-- 73 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCC-----cEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECC--
Confidence 36899999999999999999875433 469999886532 233467889999999999999999999998765
Q ss_pred cceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccC
Q 035862 150 GIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGL 229 (393)
Q Consensus 150 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~ 229 (393)
..++||||+.++.+..+. .....+++..++.++.|++.||.|||++ +++|+||+|+||++++++.+||+|||+
T Consensus 74 --~~~iv~e~~~~~~l~~~~--~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~ni~~~~~~~~kl~d~g~ 146 (288)
T cd07833 74 --RLYLVFEYVERTLLELLE--ASPGGLPPDAVRSYIWQLLQAIAYCHSH---NIIHRDIKPENILVSESGVLKLCDFGF 146 (288)
T ss_pred --EEEEEEecCCCCHHHHHH--hcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEEeeec
Confidence 569999999886666555 2334589999999999999999999998 999999999999999999999999999
Q ss_pred CccCCCCCCccccccccccCCccCccccccC-CCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHH-HHHhhcCcC-
Q 035862 230 AREGPTGDHTHVSTAVVGTYGYAAPEYIETG-HLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLL-EWVKQFPAD- 306 (393)
Q Consensus 230 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~-~~~~~~~~~- 306 (393)
+........ .......++..|+|||++.+. .++.++||||||+++|+|++|..||............ ......+..
T Consensus 147 ~~~~~~~~~-~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (288)
T cd07833 147 ARALRARPA-SPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSH 225 (288)
T ss_pred ccccCCCcc-ccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHH
Confidence 876544332 122345678899999999887 8899999999999999999999999765432211111 101000000
Q ss_pred ------Ccccc-----cccC-cccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 035862 307 ------GKKFS-----MMID-PRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLK 356 (393)
Q Consensus 307 ------~~~~~-----~~~~-~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~ 356 (393)
..... .... ......++..++.++.+|+.+||..+|++||++++++++.|
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~ 287 (288)
T cd07833 226 QELFSSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQHPY 287 (288)
T ss_pred hhhcccCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcCCC
Confidence 00000 0000 00111122234788999999999999999999999998754
No 273
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=1.1e-39 Score=294.80 Aligned_cols=260 Identities=27% Similarity=0.391 Sum_probs=205.1
Q ss_pred cCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCC-cccHHHHHHHHHHhhcCCCCccceeeeeeecCCccc
Q 035862 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG-LQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERG 150 (393)
Q Consensus 72 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 150 (393)
++|++.+.||.|+||+||+|.... .+..+++|++.... ......+.+|+.+++.++|+||+++++.+...+
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~-----~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--- 72 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLP-----NNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGD--- 72 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcC-----CCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCC---
Confidence 479999999999999999998653 33468999986543 234567889999999999999999999887765
Q ss_pred ceEEEEEeecCCCChHHHHhhcCC-CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccC
Q 035862 151 IQRLLVYEYMPNRSLEDRLFSRAQ-PTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGL 229 (393)
Q Consensus 151 ~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~ 229 (393)
..++|||++.+++|.+++..... ..+++..+..++.|++.||.|||+. |++||||+|+||++++++.++|+|||+
T Consensus 73 -~~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~---~i~h~~l~p~ni~~~~~~~~~l~df~~ 148 (267)
T cd06610 73 -ELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSN---GQIHRDIKAGNILLGEDGSVKIADFGV 148 (267)
T ss_pred -EEEEEEeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEcccch
Confidence 56999999999999999865433 5689999999999999999999998 999999999999999999999999999
Q ss_pred CccCCCCCCcc--ccccccccCCccCccccccC-CCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcC
Q 035862 230 AREGPTGDHTH--VSTAVVGTYGYAAPEYIETG-HLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPAD 306 (393)
Q Consensus 230 a~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~ 306 (393)
+.......... ......|+..|+|||.+... .++.++|+|||||++|+|++|+.||....... .........
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~--~~~~~~~~~--- 223 (267)
T cd06610 149 SASLADGGDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMK--VLMLTLQND--- 223 (267)
T ss_pred HHHhccCccccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhh--hHHHHhcCC---
Confidence 87654433221 22345688999999998776 78999999999999999999999997543321 111111110
Q ss_pred CcccccccCcccccc-cCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 035862 307 GKKFSMMIDPRLRNQ-YSINAARRVAKLADNCLKKNPEERPTMNQVVESLK 356 (393)
Q Consensus 307 ~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~ 356 (393)
.. .+... ....++..+.+++.+||..||++||++.++++|.+
T Consensus 224 ~~--------~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~p~ 266 (267)
T cd06610 224 PP--------SLETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLKHKF 266 (267)
T ss_pred CC--------CcCCccccccccHHHHHHHHHHcCCChhhCcCHHHHhhCCC
Confidence 00 00000 01245678899999999999999999999999864
No 274
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=3.6e-41 Score=320.05 Aligned_cols=265 Identities=26% Similarity=0.454 Sum_probs=221.0
Q ss_pred cCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCc-ccHHHHHHHHHHhhcCCCCccceeeeeeecCCccc
Q 035862 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL-QGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERG 150 (393)
Q Consensus 72 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 150 (393)
....+.++||.|.||.|++|+++..+ .....||||.++.... ..+..|+.|+.||-++.||||++|.|+......
T Consensus 629 s~i~Ie~VIGaGEFGEVc~GrLk~pg--kre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~P-- 704 (996)
T KOG0196|consen 629 SCVKIEKVIGAGEFGEVCSGRLKLPG--KREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKP-- 704 (996)
T ss_pred hheEEEEEEecccccceecccccCCC--CcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCce--
Confidence 34667889999999999999987544 3567899999987543 345669999999999999999999999987764
Q ss_pred ceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCC
Q 035862 151 IQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLA 230 (393)
Q Consensus 151 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a 230 (393)
..+|.|||++|+|+.||+.+.. .+...+...+++.|+.|+.||.+. ++|||||...||||+.+..+|++|||++
T Consensus 705 --vMIiTEyMENGsLDsFLR~~DG-qftviQLVgMLrGIAsGMkYLsdm---~YVHRDLAARNILVNsnLvCKVsDFGLS 778 (996)
T KOG0196|consen 705 --VMIITEYMENGSLDSFLRQNDG-QFTVIQLVGMLRGIASGMKYLSDM---NYVHRDLAARNILVNSNLVCKVSDFGLS 778 (996)
T ss_pred --eEEEhhhhhCCcHHHHHhhcCC-ceEeehHHHHHHHHHHHhHHHhhc---CchhhhhhhhheeeccceEEEeccccce
Confidence 3789999999999999987664 488899999999999999999998 9999999999999999999999999999
Q ss_pred ccCCCCCCc-cccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHh-CCCccCCCCchhhhHHHHHHhhcCcCCc
Q 035862 231 REGPTGDHT-HVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILT-GRRVLERNRPTMEQKLLEWVKQFPADGK 308 (393)
Q Consensus 231 ~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 308 (393)
+...+.... .......-...|.|||.+...+++.++||||+|++|||.++ |..||.+-+. ++++..
T Consensus 779 Rvledd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSN---QdVIka--------- 846 (996)
T KOG0196|consen 779 RVLEDDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN---QDVIKA--------- 846 (996)
T ss_pred eecccCCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccch---HHHHHH---------
Confidence 976544321 12222334568999999999999999999999999999776 9999976543 222222
Q ss_pred ccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhhc
Q 035862 309 KFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQESE 363 (393)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~~~~~~ 363 (393)
+...++.+.+.+|+..|.+|+..||++|-.+||.+.+|+..|.+++.+..
T Consensus 847 -----Ie~gyRLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIrnP~ 896 (996)
T KOG0196|consen 847 -----IEQGYRLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIRNPN 896 (996)
T ss_pred -----HHhccCCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCch
Confidence 23455666677899999999999999999999999999999999987654
No 275
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=2.4e-39 Score=304.76 Aligned_cols=273 Identities=25% Similarity=0.339 Sum_probs=203.9
Q ss_pred HhcCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCC--CcccHHHHHHHHHHhhcCCCCccceeeeeeecCC
Q 035862 70 ATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNH--GLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTED 147 (393)
Q Consensus 70 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 147 (393)
..++|+..+.||+|+||.||+|.+..++ ..||+|.+... .......+.+|+.+++.++||||+++++++....
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 88 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYDTVTG-----QNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQK 88 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEECCCC-----CEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCC
Confidence 4578999999999999999999875443 45999998643 2233456778999999999999999999886543
Q ss_pred c--ccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEe
Q 035862 148 E--RGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLS 225 (393)
Q Consensus 148 ~--~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~ 225 (393)
. .....++||||+. ++|.+.+.. .+++..+..++.|++.||+|||+. |++||||||+||+++.++.+||+
T Consensus 89 ~~~~~~~~~lv~e~~~-~~l~~~~~~----~l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nil~~~~~~~kL~ 160 (353)
T cd07850 89 SLEEFQDVYLVMELMD-ANLCQVIQM----DLDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKIL 160 (353)
T ss_pred CccccCcEEEEEeccC-CCHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEc
Confidence 2 1124699999995 588887732 278889999999999999999998 99999999999999999999999
Q ss_pred eccCCccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhH-HHH------
Q 035862 226 DFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQK-LLE------ 298 (393)
Q Consensus 226 Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~-~~~------ 298 (393)
|||++....... ......++..|+|||.+.+..++.++|||||||++|+|++|+.||...+...... ...
T Consensus 161 Dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~ 237 (353)
T cd07850 161 DFGLARTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPS 237 (353)
T ss_pred cCccceeCCCCC---CCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCC
Confidence 999997653322 1233467889999999999999999999999999999999999997654321110 000
Q ss_pred -------------HHhhcC-cCCcccccccCccc----ccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q 035862 299 -------------WVKQFP-ADGKKFSMMIDPRL----RNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLA 358 (393)
Q Consensus 299 -------------~~~~~~-~~~~~~~~~~~~~~----~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~ 358 (393)
+....+ .....+........ ........+..+.+|+.+||+.||++|||+.++++|.|..
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~~~~~ 315 (353)
T cd07850 238 DEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQHPYIN 315 (353)
T ss_pred HHHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcChhHh
Confidence 000000 00001111111110 0111223467789999999999999999999999998875
No 276
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=2.8e-39 Score=289.49 Aligned_cols=246 Identities=30% Similarity=0.485 Sum_probs=192.8
Q ss_pred eecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcc-cHHHHHHHHHHhhcCCCCccceeeeeeecCCcccceEEEEE
Q 035862 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQ-GHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVY 157 (393)
Q Consensus 79 ~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv~ 157 (393)
+||+|+||.||+|.... ...+++|.+...... ....+.+|+.+++.++||||+++++++...+ ..++||
T Consensus 2 ~ig~g~~g~vy~~~~~~------~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----~~~lv~ 71 (250)
T cd05085 2 LLGKGNFGEVFKGTLKD------KTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQ----PIYIVM 71 (250)
T ss_pred ccCCCCCceEEEEEecC------CcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCC----ccEEEE
Confidence 69999999999998532 235899988765332 2345788999999999999999999998776 459999
Q ss_pred eecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCCccCCCCC
Q 035862 158 EYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGD 237 (393)
Q Consensus 158 e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~ 237 (393)
||+.+++|.+++.... ..+++..++.++.|++.||.|||++ +++||||||+||++++++.+||+|||++.......
T Consensus 72 e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~ 147 (250)
T cd05085 72 ELVPGGDFLSFLRKKK-DELKTKQLVKFALDAAAGMAYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGI 147 (250)
T ss_pred ECCCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccChheEEEcCCCeEEECCCccceeccccc
Confidence 9999999999885433 4578999999999999999999998 99999999999999999999999999987533221
Q ss_pred CccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHh-CCCccCCCCchhhhHHHHHHhhcCcCCcccccccCc
Q 035862 238 HTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILT-GRRVLERNRPTMEQKLLEWVKQFPADGKKFSMMIDP 316 (393)
Q Consensus 238 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (393)
.. ......++..|+|||++.+..++.++||||||+++|++++ |..||.......... .....
T Consensus 148 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~---~~~~~------------- 210 (250)
T cd05085 148 YS-SSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQARE---QVEKG------------- 210 (250)
T ss_pred cc-cCCCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH---HHHcC-------------
Confidence 11 1112234567999999998899999999999999999998 999997553322111 11110
Q ss_pred ccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 035862 317 RLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLK 356 (393)
Q Consensus 317 ~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~ 356 (393)
.....+..++..+.+++.+||..+|++||++.++++.|.
T Consensus 211 -~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 211 -YRMSCPQKCPDDVYKVMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred -CCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence 001111234578999999999999999999999998864
No 277
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=1.7e-39 Score=298.69 Aligned_cols=269 Identities=27% Similarity=0.358 Sum_probs=201.4
Q ss_pred CCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcc-----cHHHHHHHHHHhhcCCCCccceeeeeeecCC
Q 035862 73 GFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQ-----GHKQWLAEVQFLGVVSHPNLVKLLGYCSTED 147 (393)
Q Consensus 73 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~-----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 147 (393)
+|++.+.||+|++|.||+|.+... +..|++|.+...... ....+..|+.+++.++|+||+++++++...+
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~-----~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~ 75 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKET-----GRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKS 75 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCC-----CcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCC
Confidence 478889999999999999996543 346999998765322 2344678999999999999999999998755
Q ss_pred cccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeec
Q 035862 148 ERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDF 227 (393)
Q Consensus 148 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Df 227 (393)
.+++||||+ +++|.+++.... ..+++..++.++.||+.||.|||++ +++|+||+|+||+++.++.++|+||
T Consensus 76 ----~~~lv~e~~-~~~L~~~i~~~~-~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nill~~~~~~~l~df 146 (298)
T cd07841 76 ----NINLVFEFM-ETDLEKVIKDKS-IVLTPADIKSYMLMTLRGLEYLHSN---WILHRDLKPNNLLIASDGVLKLADF 146 (298)
T ss_pred ----EEEEEEccc-CCCHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCChhhEEEcCCCCEEEccc
Confidence 569999999 889999985433 3689999999999999999999998 9999999999999999999999999
Q ss_pred cCCccCCCCCCccccccccccCCccCcccccc-CCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHH-HHHhhcCc
Q 035862 228 GLAREGPTGDHTHVSTAVVGTYGYAAPEYIET-GHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLL-EWVKQFPA 305 (393)
Q Consensus 228 g~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~-~~~~~~~~ 305 (393)
|++........ ......++..|+|||.+.+ ..++.++|||||||++|+|++|.++|....+....... .... .+.
T Consensus 147 g~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~-~~~ 223 (298)
T cd07841 147 GLARSFGSPNR--KMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALG-TPT 223 (298)
T ss_pred eeeeeccCCCc--cccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcC-CCc
Confidence 99976543321 1223356788999998854 46789999999999999999998888765432211111 1100 000
Q ss_pred CCc-----ccccccCcccc-----cccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q 035862 306 DGK-----KFSMMIDPRLR-----NQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLA 358 (393)
Q Consensus 306 ~~~-----~~~~~~~~~~~-----~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~ 358 (393)
... ........... .......+..+.+|+.+||++||++|||+.+++++.|..
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~~~~~ 286 (298)
T cd07841 224 EENWPGVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEHPYFS 286 (298)
T ss_pred hhhhhhcccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhCcccc
Confidence 000 00000000000 001123467899999999999999999999999987765
No 278
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4.4e-41 Score=308.86 Aligned_cols=257 Identities=21% Similarity=0.328 Sum_probs=200.1
Q ss_pred cCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCC--CcccHHHHHHHHHHhhcCC-CCccceeeeeeecCCc
Q 035862 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNH--GLQGHKQWLAEVQFLGVVS-HPNLVKLLGYCSTEDE 148 (393)
Q Consensus 72 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~ 148 (393)
..|+++++||+||.+.||++...+ ...||+|++... ......-+.+|+.+|.+++ |.+|++++++-..++
T Consensus 361 ~~Yeilk~iG~GGSSkV~kV~~s~------~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~- 433 (677)
T KOG0596|consen 361 REYEILKQIGSGGSSKVFKVLNSD------KQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDG- 433 (677)
T ss_pred chhhHHHhhcCCCcceeeeeecCC------CcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCc-
Confidence 459999999999999999997432 235777765432 3344567899999999997 999999999988866
Q ss_pred ccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeecc
Q 035862 149 RGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFG 228 (393)
Q Consensus 149 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg 228 (393)
++|+||||- ..+|..+|...... ++...++.+..|++.|+.++|++ ||||.||||.|+|+- .|.+||+|||
T Consensus 434 ---~lYmvmE~G-d~DL~kiL~k~~~~-~~~~~lk~ywkqML~aV~~IH~~---gIVHSDLKPANFLlV-kG~LKLIDFG 504 (677)
T KOG0596|consen 434 ---YLYMVMECG-DIDLNKILKKKKSI-DPDWFLKFYWKQMLLAVKTIHQH---GIVHSDLKPANFLLV-KGRLKLIDFG 504 (677)
T ss_pred ---eEEEEeecc-cccHHHHHHhccCC-CchHHHHHHHHHHHHHHHHHHHh---ceeecCCCcccEEEE-eeeEEeeeec
Confidence 789999997 45999999655443 33347888999999999999999 999999999999997 5789999999
Q ss_pred CCccCCCCCCccccccccccCCccCccccccCC-----------CCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHH
Q 035862 229 LAREGPTGDHTHVSTAVVGTYGYAAPEYIETGH-----------LKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLL 297 (393)
Q Consensus 229 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-----------~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~ 297 (393)
+|...............+||+.||+||.+.... .+.++||||||||||+|+.|++||...... .
T Consensus 505 IA~aI~~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n~-----~ 579 (677)
T KOG0596|consen 505 IANAIQPDTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIINQ-----I 579 (677)
T ss_pred hhcccCccccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHHH-----H
Confidence 998876665555667789999999999985432 457899999999999999999999743221 1
Q ss_pred HHHhhcCcCCcccccccCcccccccCHHH-HHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHH
Q 035862 298 EWVKQFPADGKKFSMMIDPRLRNQYSINA-ARRVAKLADNCLKKNPEERPTMNQVVESLKLAV 359 (393)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~~ 359 (393)
.. +..+.++...-+++..- ..++.++++.||..||++||++.++|+|.....
T Consensus 580 aK----------l~aI~~P~~~Iefp~~~~~~~li~~mK~CL~rdPkkR~si~eLLqhpFl~~ 632 (677)
T KOG0596|consen 580 AK----------LHAITDPNHEIEFPDIPENDELIDVMKCCLARDPKKRWSIPELLQHPFLQI 632 (677)
T ss_pred HH----------HHhhcCCCccccccCCCCchHHHHHHHHHHhcCcccCCCcHHHhcCccccc
Confidence 11 12223332222222111 133899999999999999999999999976544
No 279
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=8.4e-40 Score=298.59 Aligned_cols=266 Identities=26% Similarity=0.377 Sum_probs=200.0
Q ss_pred CCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCC--cccHHHHHHHHHHhhcCCCCccceeeeeeecCCccc
Q 035862 73 GFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG--LQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERG 150 (393)
Q Consensus 73 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 150 (393)
+|+..+.||.|++|.||+|.+..+ +..|++|.+.... ......+.+|+++++.++||||+++++++...+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~-----~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--- 72 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLT-----GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTEN--- 72 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCC-----CCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCC---
Confidence 488899999999999999986533 3469999886432 223356788999999999999999999987665
Q ss_pred ceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCC
Q 035862 151 IQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLA 230 (393)
Q Consensus 151 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a 230 (393)
..++||||+. ++|.+++.......+++..++.++.|++.||+|||+. +++|+||+|+||++++++.+||+|||++
T Consensus 73 -~~~~v~e~~~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~---~i~H~~l~p~nill~~~~~~~l~dfg~~ 147 (284)
T cd07860 73 -KLYLVFEFLH-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA 147 (284)
T ss_pred -cEEEEeeccc-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEeeccch
Confidence 4599999995 6899988666566789999999999999999999998 9999999999999999999999999998
Q ss_pred ccCCCCCCccccccccccCCccCccccccC-CCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcCC--
Q 035862 231 REGPTGDHTHVSTAVVGTYGYAAPEYIETG-HLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADG-- 307 (393)
Q Consensus 231 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~-- 307 (393)
........ ......++..|+|||++.+. .++.++||||||+++|+|+||+.||........ ............
T Consensus 148 ~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~--~~~~~~~~~~~~~~ 223 (284)
T cd07860 148 RAFGVPVR--TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ--LFRIFRTLGTPDEV 223 (284)
T ss_pred hhcccCcc--ccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHH--HHHHHHHhCCCChh
Confidence 75432211 12334568899999988664 468899999999999999999999976543221 111111100000
Q ss_pred ------------cccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 035862 308 ------------KKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLK 356 (393)
Q Consensus 308 ------------~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~ 356 (393)
..+......... .....++.++.++|.+||+.||.+||+++++++|.|
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~ 283 (284)
T cd07860 224 VWPGVTSLPDYKPSFPKWARQDFS-KVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAHPF 283 (284)
T ss_pred hhhhhhHHHHHHhhcccccccCHH-HHcccCCHHHHHHHHHhcCCCcccCCCHHHHhcCCC
Confidence 000000000000 011134577889999999999999999999998864
No 280
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.5e-41 Score=314.01 Aligned_cols=252 Identities=25% Similarity=0.366 Sum_probs=205.4
Q ss_pred eecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcccHHHHHHHHHHhhcCCCCccceeeeeeecCCcccceEEEEEe
Q 035862 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYE 158 (393)
Q Consensus 79 ~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv~e 158 (393)
+||+|+||+||.|++..+.- .+|||-+.........-+.+|+.+.++++|.|||+++|.+...+ +.-+.||
T Consensus 582 VLGKGTYG~VYA~RD~~tqv-----rIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senG----f~kIFME 652 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQV-----RIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENG----FFKIFME 652 (1226)
T ss_pred EeecCceeEEEeecccccee-----EEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCC----eEEEEee
Confidence 59999999999999765554 49999988766666667889999999999999999999987766 5678999
Q ss_pred ecCCCChHHHHhhcCCCCC--CHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeC-CCCceEEeeccCCccCCC
Q 035862 159 YMPNRSLEDRLFSRAQPTL--PWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLD-GNFKPKLSDFGLAREGPT 235 (393)
Q Consensus 159 ~~~~~~L~~~l~~~~~~~~--~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~-~~~~~kl~Dfg~a~~~~~ 235 (393)
.++||+|.+++...= +++ .+.++-.+.+||++||.|||.+ .|||||||-+|+||+ -.|.+||+|||-++.+..
T Consensus 653 qVPGGSLSsLLrskW-GPlKDNEstm~fYtkQILeGLkYLHen---~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAg 728 (1226)
T KOG4279|consen 653 QVPGGSLSSLLRSKW-GPLKDNESTMNFYTKQILEGLKYLHEN---KIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAG 728 (1226)
T ss_pred cCCCCcHHHHHHhcc-CCCccchhHHHHHHHHHHHHhhhhhhc---ceeeccccCCcEEEeeccceEEecccccchhhcc
Confidence 999999999996543 334 6788889999999999999999 999999999999995 569999999999887543
Q ss_pred CCCccccccccccCCccCccccccC--CCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcCCcccccc
Q 035862 236 GDHTHVSTAVVGTYGYAAPEYIETG--HLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKFSMM 313 (393)
Q Consensus 236 ~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (393)
. +.....+-||..|||||++..+ .|..++|||||||++.||.||++||..-.......+.. .-
T Consensus 729 i--nP~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMFkV--Gm----------- 793 (1226)
T KOG4279|consen 729 I--NPCTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMFKV--GM----------- 793 (1226)
T ss_pred C--CccccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhhhhh--cc-----------
Confidence 2 2234567899999999999654 68899999999999999999999996543221111100 00
Q ss_pred cCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHh
Q 035862 314 IDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQ 360 (393)
Q Consensus 314 ~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~~~ 360 (393)
=...++.+..++.++..||.+|+.+||..||++.+++........
T Consensus 794 --yKvHP~iPeelsaeak~FilrcFepd~~~R~sA~~LL~DpFlq~~ 838 (1226)
T KOG4279|consen 794 --YKVHPPIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQDPFLQHN 838 (1226)
T ss_pred --eecCCCCcHHHHHHHHHHHHHHcCCCcccCccHHHhccCcccccC
Confidence 012455677899999999999999999999999999998765443
No 281
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=4e-40 Score=300.95 Aligned_cols=269 Identities=24% Similarity=0.373 Sum_probs=200.2
Q ss_pred cCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcc--cHHHHHHHHHHhhcCCCCccceeeeeeecCCcc
Q 035862 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQ--GHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDER 149 (393)
Q Consensus 72 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 149 (393)
++|++.+.||+|+||.||+|.+... +..|++|.+...... ..+.+.+|+++++.++||||+++++++...+
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~-----~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-- 73 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKET-----GQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKK-- 73 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCC-----CCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCC--
Confidence 4688999999999999999986533 346999987654322 3456778999999999999999999997665
Q ss_pred cceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccC
Q 035862 150 GIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGL 229 (393)
Q Consensus 150 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~ 229 (393)
..++||||+++++|.++.. ....+++..++.++.|++.||.|||+. +++|+||+|+||++++++.++|+|||+
T Consensus 74 --~~~lv~e~~~~~~l~~~~~--~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~h~~l~p~ni~~~~~~~~~l~dfg~ 146 (286)
T cd07846 74 --RLYLVFEFVDHTVLDDLEK--YPNGLDESRVRKYLFQILRGIEFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGF 146 (286)
T ss_pred --eEEEEEecCCccHHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCcEEEEeeee
Confidence 5699999999988888763 334589999999999999999999998 999999999999999999999999999
Q ss_pred CccCCCCCCccccccccccCCccCcccccc-CCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhh-HHHHHHhhcCcC-
Q 035862 230 AREGPTGDHTHVSTAVVGTYGYAAPEYIET-GHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQ-KLLEWVKQFPAD- 306 (393)
Q Consensus 230 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~-~~~~~~~~~~~~- 306 (393)
+........ ......++..|+|||++.+ ..++.++||||||+++|+|++|.+||......... ............
T Consensus 147 ~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (286)
T cd07846 147 ARTLAAPGE--VYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRH 224 (286)
T ss_pred eeeccCCcc--ccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhh
Confidence 876433221 2234567889999998865 45788999999999999999999999755432211 111111110000
Q ss_pred -----------CcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 035862 307 -----------GKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLK 356 (393)
Q Consensus 307 -----------~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~ 356 (393)
+..................++..+.+|+.+||+.+|++||++.+++++.|
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~ 285 (286)
T cd07846 225 QEIFQKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHHEF 285 (286)
T ss_pred HHHhccchHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcCCC
Confidence 00000000000000011235678999999999999999999999998754
No 282
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=1.7e-39 Score=297.68 Aligned_cols=269 Identities=25% Similarity=0.369 Sum_probs=197.9
Q ss_pred hcCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCc-ccHHHHHHHHHHhhcCCCCccceeeeeeecCCcc
Q 035862 71 TNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL-QGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDER 149 (393)
Q Consensus 71 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 149 (393)
.++|++.+.||+|++|.||+|..... +..|++|.+..... .....+.+|+.+++.++||||+++++++...+
T Consensus 4 ~~~y~~~~~lg~g~~~~vy~~~~~~~-----~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-- 76 (291)
T cd07844 4 LETYKKLDKLGEGSYATVYKGRSKLT-----GQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKK-- 76 (291)
T ss_pred ccceeEEEEEeecCCeEEEEEEEcCC-----CcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCC--
Confidence 36799999999999999999986533 34699999865422 22345678999999999999999999988766
Q ss_pred cceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccC
Q 035862 150 GIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGL 229 (393)
Q Consensus 150 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~ 229 (393)
..++||||+.+ +|.+++.... ..+++..++.++.|++.||.|||+. +++||||||+||+++.++.+||+|||+
T Consensus 77 --~~~lv~e~~~~-~L~~~~~~~~-~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~ 149 (291)
T cd07844 77 --TLTLVFEYLDT-DLKQYMDDCG-GGLSMHNVRLFLFQLLRGLAYCHQR---RVLHRDLKPQNLLISERGELKLADFGL 149 (291)
T ss_pred --eEEEEEecCCC-CHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCHHHEEEcCCCCEEECcccc
Confidence 56999999975 9999885443 3688999999999999999999998 999999999999999999999999999
Q ss_pred CccCCCCCCccccccccccCCccCcccccc-CCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHH-HHHHhhcCcCC
Q 035862 230 AREGPTGDHTHVSTAVVGTYGYAAPEYIET-GHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKL-LEWVKQFPADG 307 (393)
Q Consensus 230 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~-~~~~~~~~~~~ 307 (393)
+........ ......++..|+|||++.+ ..++.++||||+|+++|+|++|..||.......+... .......+...
T Consensus 150 ~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (291)
T cd07844 150 ARAKSVPSK--TYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEE 227 (291)
T ss_pred ccccCCCCc--cccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChh
Confidence 875432211 1123356788999998865 5588999999999999999999999975542222111 10000000000
Q ss_pred c-------------ccccccCcccccccCHHHH--HHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 035862 308 K-------------KFSMMIDPRLRNQYSINAA--RRVAKLADNCLKKNPEERPTMNQVVESLK 356 (393)
Q Consensus 308 ~-------------~~~~~~~~~~~~~~~~~~~--~~l~~li~~~l~~dp~~Rps~~~~l~~l~ 356 (393)
. .........+... ....+ .++.+++.+||+.+|++|||+.+++.+.|
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~~~ 290 (291)
T cd07844 228 TWPGVSSNPEFKPYSFPFYPPRPLINH-APRLDRIPHGEELALKFLQYEPKKRISAAEAMKHPY 290 (291)
T ss_pred hhhhhhhccccccccccccCChhHHHh-CcCCCCchhHHHHHHHHhccCcccccCHHHHhcCCC
Confidence 0 0000000000000 00122 67889999999999999999999998754
No 283
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=7.4e-40 Score=300.87 Aligned_cols=254 Identities=24% Similarity=0.353 Sum_probs=201.7
Q ss_pred CcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcccHHHHHHHHHHhhcCCCCccceeeeeeecCCcccceE
Q 035862 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQR 153 (393)
Q Consensus 74 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 153 (393)
|.....||.|+||.||+|.+...+ ..|++|.+..........+.+|+.++..++|||++++++++...+ ..
T Consensus 23 ~~~~~~ig~g~~g~v~~~~~~~~~-----~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~----~~ 93 (297)
T cd06659 23 LENYIKIGEGSTGIVCIAREKHSG-----RQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGE----EL 93 (297)
T ss_pred HHhhhhcCCCCceeEEEEEEcCCC-----CEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCC----eE
Confidence 445567999999999999865333 369999987654455567889999999999999999999988766 56
Q ss_pred EEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCCccC
Q 035862 154 LLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREG 233 (393)
Q Consensus 154 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~ 233 (393)
++||||+++++|.+++.. ..+++..++.++.|++.||.|||++ +++||||+|+||+++.++.+||+|||++...
T Consensus 94 ~iv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~ 167 (297)
T cd06659 94 WVLMEFLQGGALTDIVSQ---TRLNEEQIATVCESVLQALCYLHSQ---GVIHRDIKSDSILLTLDGRVKLSDFGFCAQI 167 (297)
T ss_pred EEEEecCCCCCHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHeEEccCCcEEEeechhHhhc
Confidence 999999999999987733 4578999999999999999999998 9999999999999999999999999998654
Q ss_pred CCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcCCcccccc
Q 035862 234 PTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKFSMM 313 (393)
Q Consensus 234 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (393)
..... ......|+..|+|||++.+..++.++|||||||++|+|++|..||....+..... .....+...
T Consensus 168 ~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~---~~~~~~~~~------ 236 (297)
T cd06659 168 SKDVP--KRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMK---RLRDSPPPK------ 236 (297)
T ss_pred ccccc--cccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH---HHhccCCCC------
Confidence 32211 1234578899999999998889999999999999999999999997554322111 111110000
Q ss_pred cCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHH
Q 035862 314 IDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAV 359 (393)
Q Consensus 314 ~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~~ 359 (393)
.......+..+.+++.+||+.+|++||++.+++++.+...
T Consensus 237 ------~~~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~~~~~~ 276 (297)
T cd06659 237 ------LKNAHKISPVLRDFLERMLTREPQERATAQELLDHPFLLQ 276 (297)
T ss_pred ------ccccCCCCHHHHHHHHHHhcCCcccCcCHHHHhhChhhcc
Confidence 0001124567899999999999999999999999987664
No 284
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=6.7e-40 Score=296.07 Aligned_cols=258 Identities=28% Similarity=0.406 Sum_probs=204.1
Q ss_pred cCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCc-ccHHHHHHHHHHhhcCCCCccceeeeeeecCCccc
Q 035862 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL-QGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERG 150 (393)
Q Consensus 72 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 150 (393)
++|+..+.||.|++|.||+|.+...+ ..+++|.+..... .....+.+|+.+++.++||||+++++.+....
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~~~~-----~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~--- 72 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHRPTG-----KIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNG--- 72 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEcCCC-----cEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCC---
Confidence 36888889999999999999875433 4599998876532 34466789999999999999999999988775
Q ss_pred ceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhc-CCCCCeEeccCCCCCeEeCCCCceEEeeccC
Q 035862 151 IQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHE-GLEIQVIYRDFKTSNVLLDGNFKPKLSDFGL 229 (393)
Q Consensus 151 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~-~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~ 229 (393)
..++++||+.+++|.+++.... ..+++..+..++.|++.||+|||+ . +++|+||||+||++++++.++|+|||.
T Consensus 73 -~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~---~i~H~dl~~~ni~~~~~~~~~l~d~g~ 147 (265)
T cd06605 73 -DISICMEYMDGGSLDKILKEVQ-GRIPERILGKIAVAVLKGLTYLHEKH---KIIHRDVKPSNILVNSRGQIKLCDFGV 147 (265)
T ss_pred -EEEEEEEecCCCcHHHHHHHcc-CCCCHHHHHHHHHHHHHHHHHHcCCC---CeecCCCCHHHEEECCCCCEEEeeccc
Confidence 5699999999999999986543 568899999999999999999999 7 999999999999999999999999999
Q ss_pred CccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcCCcc
Q 035862 230 AREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKK 309 (393)
Q Consensus 230 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 309 (393)
+....... .....++..|+|||.+.+..++.++||||||+++|+|++|..||.......... .........
T Consensus 148 ~~~~~~~~----~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~-~~~~~~~~~---- 218 (265)
T cd06605 148 SGQLVNSL----AKTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGI-FELLQYIVN---- 218 (265)
T ss_pred chhhHHHH----hhcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccH-HHHHHHHhc----
Confidence 86542211 112578889999999999999999999999999999999999997543211110 011110000
Q ss_pred cccccCcccccccCH-HHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q 035862 310 FSMMIDPRLRNQYSI-NAARRVAKLADNCLKKNPEERPTMNQVVESLKLA 358 (393)
Q Consensus 310 ~~~~~~~~~~~~~~~-~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~ 358 (393)
.. ....+. .++.++.++|.+||..||++|||+.+++.+.|..
T Consensus 219 ------~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~~ 261 (265)
T cd06605 219 ------EP-PPRLPSGKFSPDFQDFVNLCLIKDPRERPSYKELLEHPFIK 261 (265)
T ss_pred ------CC-CCCCChhhcCHHHHHHHHHHcCCCchhCcCHHHHhhCchhh
Confidence 00 001111 1567899999999999999999999999998764
No 285
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=1.9e-39 Score=299.40 Aligned_cols=257 Identities=25% Similarity=0.336 Sum_probs=199.4
Q ss_pred cCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCc---ccHHHHHHHHHHhhcCCCCccceeeeeeecCCc
Q 035862 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL---QGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDE 148 (393)
Q Consensus 72 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 148 (393)
++|++.+.||+|+||.||++.+.... ..|++|.+..... .....+.+|+.+++.++||||+++++.+...+
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~-----~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~- 74 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETR-----QRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKR- 74 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCC-----cEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCC-
Confidence 46899999999999999999875443 4599998875432 22345778999999999999999999987765
Q ss_pred ccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeecc
Q 035862 149 RGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFG 228 (393)
Q Consensus 149 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg 228 (393)
+.++||||++|++|.+++.. ...+++..+..++.|++.||.|||+. +++||||||+||+++.++.++|+|||
T Consensus 75 ---~~~lv~e~~~g~~L~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~NIll~~~~~~~l~dfg 146 (305)
T cd05609 75 ---HLCMVMEYVEGGDCATLLKN--IGALPVDMARMYFAETVLALEYLHNY---GIVHRDLKPDNLLITSMGHIKLTDFG 146 (305)
T ss_pred ---EEEEEEecCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHEEECCCCCEEEeeCC
Confidence 56999999999999999944 35689999999999999999999998 99999999999999999999999999
Q ss_pred CCccCCCCCCc-------------cccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhH
Q 035862 229 LAREGPTGDHT-------------HVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQK 295 (393)
Q Consensus 229 ~a~~~~~~~~~-------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~ 295 (393)
+++........ .......++..|+|||.+.+..++.++|+|||||++|+|++|..||....... .
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~--~ 224 (305)
T cd05609 147 LSKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEE--L 224 (305)
T ss_pred CccccCcCccccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--H
Confidence 98642111100 01112457889999999988889999999999999999999999997543321 1
Q ss_pred HHHHHhhcCcCCcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCC---HHHHHHHHHH
Q 035862 296 LLEWVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPT---MNQVVESLKL 357 (393)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps---~~~~l~~l~~ 357 (393)
.......... .+. ....++.++.+++.+||+.||++||+ +.+++++.+.
T Consensus 225 ~~~~~~~~~~---------~~~----~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~~~~ 276 (305)
T cd05609 225 FGQVISDDIE---------WPE----GDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQHRFF 276 (305)
T ss_pred HHHHHhcccC---------CCC----ccccCCHHHHHHHHHHhccChhhccCccCHHHHHhCccc
Confidence 1111110000 000 01134577899999999999999998 6777777654
No 286
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=1.4e-39 Score=298.44 Aligned_cols=259 Identities=24% Similarity=0.365 Sum_probs=206.3
Q ss_pred hcCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcccHHHHHHHHHHhhcCCCCccceeeeeeecCCccc
Q 035862 71 TNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERG 150 (393)
Q Consensus 71 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 150 (393)
.++|.+.+.||+|+||.||+|....+ +..|++|.+..........+.+|+.+++.++||||+++++.+...+
T Consensus 18 ~~~~~~~~~lg~g~~g~v~~~~~~~~-----~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~--- 89 (293)
T cd06647 18 KKKYTRFEKIGQGASGTVYTAIDVAT-----GQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGD--- 89 (293)
T ss_pred hhhceeeeEecCCCCeEEEEEEEcCC-----CCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCC---
Confidence 36799999999999999999986433 3359999986554444567888999999999999999999988766
Q ss_pred ceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCC
Q 035862 151 IQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLA 230 (393)
Q Consensus 151 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a 230 (393)
..++|+||+++++|.+++.. ..+++..+..++.|++.||.|||+. |++|+||+|+||+++.++.++|+|||++
T Consensus 90 -~~~lv~e~~~~~~L~~~~~~---~~l~~~~~~~i~~~l~~al~~LH~~---gi~H~dL~p~Nili~~~~~~kL~dfg~~ 162 (293)
T cd06647 90 -ELWVVMEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFC 162 (293)
T ss_pred -cEEEEEecCCCCcHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhC---CEeeccCCHHHEEEcCCCCEEEccCcce
Confidence 45999999999999998843 3478889999999999999999998 9999999999999999999999999988
Q ss_pred ccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcCCccc
Q 035862 231 REGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKF 310 (393)
Q Consensus 231 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (393)
........ ......+++.|+|||.+.+..++.++|+||||+++|++++|..||........... .. ..
T Consensus 163 ~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~--~~----~~---- 230 (293)
T cd06647 163 AQITPEQS--KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYL--IA----TN---- 230 (293)
T ss_pred eccccccc--ccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheee--hh----cC----
Confidence 75433222 12334688899999999888899999999999999999999999976543211100 00 00
Q ss_pred ccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhh
Q 035862 311 SMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQE 361 (393)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~~~~ 361 (393)
.......+..++..+.+++.+||..+|++||++.+++.|.+.....
T Consensus 231 -----~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h~~~~~~~ 276 (293)
T cd06647 231 -----GTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHPFLKIAK 276 (293)
T ss_pred -----CCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCHHHhcCc
Confidence 0000111223457789999999999999999999999998775443
No 287
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=2.7e-39 Score=290.84 Aligned_cols=251 Identities=27% Similarity=0.374 Sum_probs=199.5
Q ss_pred CCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCC-----cccHHHHHHHHHHhhcCCCCccceeeeeeecCC
Q 035862 73 GFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG-----LQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTED 147 (393)
Q Consensus 73 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 147 (393)
+|+..+.||+|++|.||+|....++ ..|++|.+.... ......+.+|+.+++.++|+||+++++++....
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~-----~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~ 75 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDG-----DFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREED 75 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCC-----cEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCC
Confidence 4778889999999999999865333 359999876532 123456788999999999999999999987665
Q ss_pred cccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeec
Q 035862 148 ERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDF 227 (393)
Q Consensus 148 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Df 227 (393)
..+++|||+++++|.+++.. ...+++..++.++.|++.||.|||+. +++|+||+|+||+++.++.+||+||
T Consensus 76 ----~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~~~ni~~~~~~~~kl~d~ 146 (258)
T cd06632 76 ----NLYIFLELVPGGSLAKLLKK--YGSFPEPVIRLYTRQILLGLEYLHDR---NTVHRDIKGANILVDTNGVVKLADF 146 (258)
T ss_pred ----eEEEEEEecCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccC
Confidence 56999999999999999853 34588999999999999999999998 9999999999999999999999999
Q ss_pred cCCccCCCCCCccccccccccCCccCccccccCC-CCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcC
Q 035862 228 GLAREGPTGDHTHVSTAVVGTYGYAAPEYIETGH-LKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPAD 306 (393)
Q Consensus 228 g~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~ 306 (393)
|++....... ......++..|+|||.+.... ++.++|+||||+++|+|++|..||....+.. ..........
T Consensus 147 ~~~~~~~~~~---~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~--~~~~~~~~~~-- 219 (258)
T cd06632 147 GMAKQVVEFS---FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVA--AVFKIGRSKE-- 219 (258)
T ss_pred ccceeccccc---cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHH--HHHHHHhccc--
Confidence 9987643322 123456889999999987766 8999999999999999999999997654211 1111111000
Q ss_pred CcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 035862 307 GKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLK 356 (393)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~ 356 (393)
....+..++..+.+++.+||+.+|.+||++.+++.+.+
T Consensus 220 ------------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~ 257 (258)
T cd06632 220 ------------LPPIPDHLSDEAKDFILKCLQRDPSLRPTAAELLEHPF 257 (258)
T ss_pred ------------CCCcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhcCCC
Confidence 01112234678899999999999999999999998753
No 288
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=1.8e-39 Score=293.82 Aligned_cols=257 Identities=21% Similarity=0.367 Sum_probs=201.2
Q ss_pred CCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCc------ccHHHHHHHHHHhhcCCCCccceeeeeeecC
Q 035862 73 GFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL------QGHKQWLAEVQFLGVVSHPNLVKLLGYCSTE 146 (393)
Q Consensus 73 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 146 (393)
+|+..+.||+|++|.||+|.+..++ ..+++|.+..... .....+.+|+.+++.++|+||+++++++...
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~-----~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~ 75 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTG-----TLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCED 75 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCC-----cEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccC
Confidence 4788899999999999999865443 3599998865331 1245678899999999999999999999876
Q ss_pred CcccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCC-ceEEe
Q 035862 147 DERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNF-KPKLS 225 (393)
Q Consensus 147 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~-~~kl~ 225 (393)
+ ..++||||+.+++|.+++.. ...+++..++.++.|++.||.|||++ |++|+||+|+||+++.++ .++|+
T Consensus 76 ~----~~~~v~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~ql~~al~~LH~~---~i~H~~i~~~nil~~~~~~~~~l~ 146 (268)
T cd06630 76 S----HFNLFVEWMAGGSVSHLLSK--YGAFKEAVIINYTEQLLRGLSYLHEN---QIIHRDVKGANLLIDSTGQRLRIA 146 (268)
T ss_pred C----eEEEEEeccCCCcHHHHHHH--hCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEc
Confidence 6 55999999999999999853 34688999999999999999999998 999999999999998776 59999
Q ss_pred eccCCccCCCCCCc--cccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhc
Q 035862 226 DFGLAREGPTGDHT--HVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQF 303 (393)
Q Consensus 226 Dfg~a~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~ 303 (393)
|||.+......... .......++..|+|||.+.+..++.++|+||+|+++|+|++|..||.................
T Consensus 147 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~- 225 (268)
T cd06630 147 DFGAAARLAAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIAS- 225 (268)
T ss_pred ccccccccccccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhc-
Confidence 99998765432111 112234678899999999888899999999999999999999999964432211111110000
Q ss_pred CcCCcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 035862 304 PADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLK 356 (393)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~ 356 (393)
.......+...+.++.+++.+||..+|.+||++.++++|.+
T Consensus 226 ------------~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~~~~ 266 (268)
T cd06630 226 ------------ATTAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLKHPV 266 (268)
T ss_pred ------------cCCCCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhcCcc
Confidence 00112233356688999999999999999999999998865
No 289
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-40 Score=312.66 Aligned_cols=258 Identities=28% Similarity=0.442 Sum_probs=214.9
Q ss_pred CcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcc-cHHHHHHHHHHhhcCCCCccceeeeeeecCCcccce
Q 035862 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQ-GHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQ 152 (393)
Q Consensus 74 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 152 (393)
....++||+|.||.|++|.|.. ..++...||||++...... ....|++|+.+|..++|+|++++||+..+..
T Consensus 112 i~l~e~LG~GsFgvV~rg~Wt~--psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~qp----- 184 (1039)
T KOG0199|consen 112 IKLYELLGEGSFGVVKRGTWTQ--PSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLDQP----- 184 (1039)
T ss_pred HHHHHHhcCcceeeEeeccccC--CCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeeccch-----
Confidence 3445689999999999999865 4567788999999877554 6678999999999999999999999998743
Q ss_pred EEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCCcc
Q 035862 153 RLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLARE 232 (393)
Q Consensus 153 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~ 232 (393)
+.+|||.+..|+|.+.|+......+.......++.||+.||.||.++ ++|||||...|+|+.....|||+|||+.+.
T Consensus 185 ~mMV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLesk---rlvHRDLAARNlllasprtVKI~DFGLmRa 261 (1039)
T KOG0199|consen 185 AMMVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESK---RLVHRDLAARNLLLASPRTVKICDFGLMRA 261 (1039)
T ss_pred hhHHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhh---hhhhhhhhhhhheecccceeeeecccceec
Confidence 37899999999999999886677788899999999999999999999 999999999999999999999999999998
Q ss_pred CCCCCCcc-ccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHh-CCCccCCCCchhhhHHHHHHhhcCcCCccc
Q 035862 233 GPTGDHTH-VSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILT-GRRVLERNRPTMEQKLLEWVKQFPADGKKF 310 (393)
Q Consensus 233 ~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (393)
+...+... +.....-...|+|||.+....++.++|||++||++||||| |..||.+.......
T Consensus 262 Lg~ned~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~qIL---------------- 325 (1039)
T KOG0199|consen 262 LGENEDMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQIL---------------- 325 (1039)
T ss_pred cCCCCcceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHHHHH----------------
Confidence 77655443 2233445568999999999999999999999999999999 77888765432211
Q ss_pred ccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q 035862 311 SMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLA 358 (393)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~ 358 (393)
+.+|.+-+...+..|++++++++..||..+|.+||++..|.+.+-..
T Consensus 326 -~~iD~~erLpRPk~csedIY~imk~cWah~paDRptFsair~~~~l~ 372 (1039)
T KOG0199|consen 326 -KNIDAGERLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIREDLVLA 372 (1039)
T ss_pred -HhccccccCCCCCCChHHHHHHHHHhccCCccccccHHHHHHhHHHH
Confidence 12233333445557899999999999999999999999998655433
No 290
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.2e-41 Score=290.26 Aligned_cols=251 Identities=25% Similarity=0.364 Sum_probs=206.5
Q ss_pred hcCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcccHH---HHHHHHHHhhcCCCCccceeeeeeecCC
Q 035862 71 TNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHK---QWLAEVQFLGVVSHPNLVKLLGYCSTED 147 (393)
Q Consensus 71 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~---~~~~E~~~l~~l~h~niv~~~~~~~~~~ 147 (393)
.++|..+++||+|+||.|-+++ ++..++.+|+|++++....... .-+.|-++|+..+||.+..+...|...+
T Consensus 167 m~dFdfLKvLGkGTFGKVIL~r-----EKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~d 241 (516)
T KOG0690|consen 167 MEDFDFLKVLGKGTFGKVILCR-----EKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQD 241 (516)
T ss_pred cchhhHHHHhcCCccceEEEEe-----ecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCc
Confidence 4679999999999999999998 4556668999999887544333 3467889999999999999988888887
Q ss_pred cccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeec
Q 035862 148 ERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDF 227 (393)
Q Consensus 148 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Df 227 (393)
.+|+||||++||.|.-.| .....+++...+.+...|+.||.|||++ +||+||||.+|+|++.+|++||+||
T Consensus 242 ----rlCFVMeyanGGeLf~HL--srer~FsE~RtRFYGaEIvsAL~YLHs~---~ivYRDlKLENLlLDkDGHIKitDF 312 (516)
T KOG0690|consen 242 ----RLCFVMEYANGGELFFHL--SRERVFSEDRTRFYGAEIVSALGYLHSR---NIVYRDLKLENLLLDKDGHIKITDF 312 (516)
T ss_pred ----eEEEEEEEccCceEeeeh--hhhhcccchhhhhhhHHHHHHhhhhhhC---CeeeeechhhhheeccCCceEeeec
Confidence 679999999999998777 4456789999999999999999999999 9999999999999999999999999
Q ss_pred cCCccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcCC
Q 035862 228 GLAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADG 307 (393)
Q Consensus 228 g~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 307 (393)
|+++..... .......+|||.|+|||++....|...+|.|.+||++|||++|+.||...+...-..++-..
T Consensus 313 GLCKE~I~~--g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl~e------- 383 (516)
T KOG0690|consen 313 GLCKEEIKY--GDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELILME------- 383 (516)
T ss_pred ccchhcccc--cceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhHHHHHHHhh-------
Confidence 999753322 22456789999999999999999999999999999999999999999865443222221100
Q ss_pred cccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHHH
Q 035862 308 KKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERP-----TMNQVVESL 355 (393)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rp-----s~~~~l~~l 355 (393)
...++..+++++..|+..+|.+||.+|. .+.+|..|-
T Consensus 384 -----------d~kFPr~ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~h~ 425 (516)
T KOG0690|consen 384 -----------DLKFPRTLSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMRHR 425 (516)
T ss_pred -----------hccCCccCCHHHHHHHHHHhhcChHhhcCCCchhHHHHHhhh
Confidence 0123335678899999999999999995 367777763
No 291
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=1.1e-38 Score=288.82 Aligned_cols=255 Identities=22% Similarity=0.358 Sum_probs=187.6
Q ss_pred eecccCCceEEEEEEcCCCCCCCceEEEEEEecCCC-cccHHHHHHHHHHhhcCCCCccceeeeeeecCCcccceEEEEE
Q 035862 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG-LQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVY 157 (393)
Q Consensus 79 ~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv~ 157 (393)
.||+|+||.||+|...... ....+++|.+.... ......+.+|+.+++.++||||+++++.+.... ..++||
T Consensus 2 ~lg~G~~g~v~~~~~~~~~---~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~----~~~lv~ 74 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDT---GVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAI----PYLLVF 74 (268)
T ss_pred cCCCCcCceEEEEEEEcCC---CcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCC----ccEEEE
Confidence 5999999999999754222 23346677765432 234567889999999999999999999998765 459999
Q ss_pred eecCCCChHHHHhhcC--CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCCccCCC
Q 035862 158 EYMPNRSLEDRLFSRA--QPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPT 235 (393)
Q Consensus 158 e~~~~~~L~~~l~~~~--~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~ 235 (393)
||+++++|.+++.... ....++..++.++.|++.||.|||+. +++||||||+|||++.++.++|+|||++.....
T Consensus 75 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~ 151 (268)
T cd05086 75 EYCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKH---NFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYK 151 (268)
T ss_pred ecCCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC---CeeccCCccceEEEcCCccEEecccccccccCc
Confidence 9999999999996532 23467777889999999999999998 999999999999999999999999999864322
Q ss_pred CCCccccccccccCCccCcccccc-------CCCCchhhHHHHHHHHHHHHh-CCCccCCCCchhhhHHHHHHhhcCcCC
Q 035862 236 GDHTHVSTAVVGTYGYAAPEYIET-------GHLKSQSDIWSFGVVLYEILT-GRRVLERNRPTMEQKLLEWVKQFPADG 307 (393)
Q Consensus 236 ~~~~~~~~~~~gt~~y~aPE~~~~-------~~~~~~~DiwslGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~ 307 (393)
...........++..|+|||++.. ..++.++|||||||++|||++ |..||....+.. ..........
T Consensus 152 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~--~~~~~~~~~~--- 226 (268)
T cd05086 152 EDYIETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDRE--VLNHVIKDQQ--- 226 (268)
T ss_pred chhhhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHH--HHHHHHhhcc---
Confidence 221112234567889999998743 245789999999999999997 566776543321 1111111100
Q ss_pred cccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 035862 308 KKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLK 356 (393)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~ 356 (393)
....++... ...++.+.+++..|| .+|++||+++++++.|.
T Consensus 227 ---~~~~~~~~~----~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 227 ---VKLFKPQLE----LPYSERWYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred ---cccCCCccC----CCCcHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 011112211 124567888999999 78999999999998763
No 292
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=3e-39 Score=296.06 Aligned_cols=270 Identities=24% Similarity=0.355 Sum_probs=198.2
Q ss_pred hcCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCc-ccHHHHHHHHHHhhcCCCCccceeeeeeecCCcc
Q 035862 71 TNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL-QGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDER 149 (393)
Q Consensus 71 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 149 (393)
+++|.+.+.||+|+||.||+|.....+ ..|++|.+..... .....+.+|+.+++.++|+||+++++++...+
T Consensus 4 ~~~y~~~~~ig~g~~~~v~~~~~~~~~-----~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~-- 76 (291)
T cd07870 4 ATSYLNLEKLGEGSYATVYKGISRING-----QLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKE-- 76 (291)
T ss_pred cceeEEEEEEEecCCEEEEEEEEcCCC-----cEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCC--
Confidence 467999999999999999999865443 3599999865432 22345678999999999999999999988665
Q ss_pred cceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccC
Q 035862 150 GIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGL 229 (393)
Q Consensus 150 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~ 229 (393)
..++||||+. ++|.+++.... ..+++..+..++.|++.||.|||+. +++|+||||+||+++.++.++|+|||+
T Consensus 77 --~~~lv~e~~~-~~l~~~~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~ 149 (291)
T cd07870 77 --TLTFVFEYMH-TDLAQYMIQHP-GGLHPYNVRLFMFQLLRGLAYIHGQ---HILHRDLKPQNLLISYLGELKLADFGL 149 (291)
T ss_pred --eEEEEEeccc-CCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEEcCCCcEEEecccc
Confidence 5699999995 68877764333 4578888899999999999999998 999999999999999999999999999
Q ss_pred CccCCCCCCccccccccccCCccCccccccC-CCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHh-hcCcCC
Q 035862 230 AREGPTGDHTHVSTAVVGTYGYAAPEYIETG-HLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVK-QFPADG 307 (393)
Q Consensus 230 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~-~~~~~~ 307 (393)
+........ ......++..|+|||.+.+. .++.++|||||||++|+|++|..||....+..+.....+.. ..+.+.
T Consensus 150 ~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~ 227 (291)
T cd07870 150 ARAKSIPSQ--TYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTED 227 (291)
T ss_pred ccccCCCCC--CCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChh
Confidence 875432221 12334678899999998764 57889999999999999999999997655432221111100 001000
Q ss_pred ---------ccccccc----Cccccccc-CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 035862 308 ---------KKFSMMI----DPRLRNQY-SINAARRVAKLADNCLKKNPEERPTMNQVVESLK 356 (393)
Q Consensus 308 ---------~~~~~~~----~~~~~~~~-~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~ 356 (393)
....... ...+.... ....+..+.+++.+||..||.+|||+.+++.|.|
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h~~ 290 (291)
T cd07870 228 TWPGVSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLHPY 290 (291)
T ss_pred hhhhhhhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhcCCC
Confidence 0000000 00000000 0012467889999999999999999999998754
No 293
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=1.2e-39 Score=304.61 Aligned_cols=279 Identities=24% Similarity=0.323 Sum_probs=207.8
Q ss_pred hcCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCC--cccHHHHHHHHHHhhcCCCCccceeeeeeecCCc
Q 035862 71 TNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG--LQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDE 148 (393)
Q Consensus 71 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 148 (393)
.++|++.+.||.|+||.||+|....++ ..|++|.+.... ......+.+|+.+++.++||||+++++++.....
T Consensus 4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~-----~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 78 (334)
T cd07855 4 GSRYKPIENIGSGAYGVVCSAIDTRSG-----KKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGA 78 (334)
T ss_pred hhceeeeeeeecCCCeEEEEEEEcCCC-----CEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCC
Confidence 367999999999999999999865443 469999987542 2334567789999999999999999998876554
Q ss_pred ccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeecc
Q 035862 149 RGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFG 228 (393)
Q Consensus 149 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg 228 (393)
....+++||||+. ++|.+++. ....+++..++.++.|++.||.|||++ +++||||||+||++++++.+||+|||
T Consensus 79 ~~~~~~lv~e~~~-~~l~~~~~--~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~dfg 152 (334)
T cd07855 79 DFKDVYVVMDLME-SDLHHIIH--SDQPLTEEHIRYFLYQLLRGLKYIHSA---NVIHRDLKPSNLLVNEDCELRIGDFG 152 (334)
T ss_pred CCceEEEEEehhh-hhHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEecccc
Confidence 4457799999995 58998884 344589999999999999999999998 99999999999999999999999999
Q ss_pred CCccCCCCCCc--cccccccccCCccCcccccc-CCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCc
Q 035862 229 LAREGPTGDHT--HVSTAVVGTYGYAAPEYIET-GHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPA 305 (393)
Q Consensus 229 ~a~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~ 305 (393)
++......... .......|+..|+|||.+.+ ..++.++|||||||++|+|++|+.||..................+.
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~ 232 (334)
T cd07855 153 MARGLSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPS 232 (334)
T ss_pred cceeecccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCCh
Confidence 98754332211 12234578899999998865 5688999999999999999999999976544322211111111110
Q ss_pred CC-------cccccccCc-cccc-----ccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHh
Q 035862 306 DG-------KKFSMMIDP-RLRN-----QYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQ 360 (393)
Q Consensus 306 ~~-------~~~~~~~~~-~~~~-----~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~~~ 360 (393)
.. ......... .... ......+.++.+++.+||+.+|.+||++.+++.+.|....
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~~~~~ 300 (334)
T cd07855 233 EEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQHPFLAQY 300 (334)
T ss_pred hHhhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhChhhhhc
Confidence 00 000000000 0000 0112346889999999999999999999999999988643
No 294
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=5e-39 Score=288.91 Aligned_cols=251 Identities=30% Similarity=0.507 Sum_probs=197.0
Q ss_pred cCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcccHHHHHHHHHHhhcCCCCccceeeeeeecCCcccc
Q 035862 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGI 151 (393)
Q Consensus 72 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 151 (393)
.+|++.+.||.|+||.||+|.+.. +..+++|.+.... .....+.+|+++++.++|||++++++++....
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~~------~~~~~~k~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~---- 72 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWLE------KRKVAIKTIREGA-MSEEDFIEEAQVMMKLSHPKLVQLYGVCTERS---- 72 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEeC------CCeEEEEECCCCC-CCHHHHHHHHHHHHhCCCCCeeeEEEEEccCC----
Confidence 368888999999999999998642 2248999886543 23456888999999999999999999987665
Q ss_pred eEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCCc
Q 035862 152 QRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAR 231 (393)
Q Consensus 152 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~ 231 (393)
..++||||+.+++|.+++.... ..+++..++.++.|++.|+.|||+. +++|+||||+||+++.++.++|+|||++.
T Consensus 73 ~~~~v~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~ 148 (256)
T cd05112 73 PICLVFEFMEHGCLSDYLRAQR-GKFSQETLLGMCLDVCEGMAYLESS---NVIHRDLAARNCLVGENQVVKVSDFGMTR 148 (256)
T ss_pred ceEEEEEcCCCCcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHHHC---CccccccccceEEEcCCCeEEECCCccee
Confidence 4599999999999999885433 3578999999999999999999998 99999999999999999999999999987
Q ss_pred cCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHh-CCCccCCCCchhhhHHHHHHhhcCcCCccc
Q 035862 232 EGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILT-GRRVLERNRPTMEQKLLEWVKQFPADGKKF 310 (393)
Q Consensus 232 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (393)
....... .......++..|+|||.+.+..++.++||||||+++|+|++ |..||....... ...... ....
T Consensus 149 ~~~~~~~-~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~---~~~~~~---~~~~-- 219 (256)
T cd05112 149 FVLDDQY-TSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSE---VVETIN---AGFR-- 219 (256)
T ss_pred ecccCcc-cccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHH---HHHHHh---CCCC--
Confidence 5432211 11122335678999999998899999999999999999998 999987543221 111110 0000
Q ss_pred ccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 035862 311 SMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESL 355 (393)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l 355 (393)
... +...+..+.+|+.+||+.+|++||++.++++.|
T Consensus 220 --~~~-------~~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l 255 (256)
T cd05112 220 --LYK-------PRLASQSVYELMQHCWKERPEDRPSFSLLLHQL 255 (256)
T ss_pred --CCC-------CCCCCHHHHHHHHHHcccChhhCCCHHHHHHhh
Confidence 000 111347799999999999999999999999876
No 295
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=7.1e-41 Score=287.74 Aligned_cols=282 Identities=23% Similarity=0.335 Sum_probs=208.1
Q ss_pred hcCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCC--cccHHHHHHHHHHhhcCCCCccceeeeeeecCCc
Q 035862 71 TNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG--LQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDE 148 (393)
Q Consensus 71 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 148 (393)
...|+.+..||+|+||.||+|.-..+..+ ..+.+|+|+++... ........+|+.+++.++|||++.+..++...+.
T Consensus 23 l~~ye~ig~Ig~GTYG~VykA~~~~~n~k-r~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~ 101 (438)
T KOG0666|consen 23 LFEYEGIGKIGRGTYGKVYKAVRKNTNDK-RTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDK 101 (438)
T ss_pred HHHhhccceecccccceeeEeeeccCCcc-cchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCc
Confidence 45699999999999999999965433322 24579999987652 2333567899999999999999999999987533
Q ss_pred ccceEEEEEeecCCCChHHHHhh---cCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCC----Cc
Q 035862 149 RGIQRLLVYEYMPNRSLEDRLFS---RAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGN----FK 221 (393)
Q Consensus 149 ~~~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~----~~ 221 (393)
..++++||.+. +|...|+. .....++...+..|+.||+.|+.|||++ =|+||||||.||||..+ |.
T Consensus 102 ---~v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~N---WvlHRDLKPaNIlvmgdgperG~ 174 (438)
T KOG0666|consen 102 ---KVWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSN---WVLHRDLKPANILVMGDGPERGR 174 (438)
T ss_pred ---eEEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhh---heeeccCCcceEEEeccCCccCe
Confidence 56999999977 88887742 2335689999999999999999999999 89999999999999887 89
Q ss_pred eEEeeccCCccCCCCCCcc-ccccccccCCccCcccccc-CCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhh-----
Q 035862 222 PKLSDFGLAREGPTGDHTH-VSTAVVGTYGYAAPEYIET-GHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQ----- 294 (393)
Q Consensus 222 ~kl~Dfg~a~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~----- 294 (393)
|||+|||+++.....-... .....+-|.+|+|||++.| ..|+.+.|||++|||+.||+|..+.|.........
T Consensus 175 VKIaDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq 254 (438)
T KOG0666|consen 175 VKIADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQ 254 (438)
T ss_pred eEeecccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCch
Confidence 9999999999765443222 2345678999999999987 57999999999999999999999999654332221
Q ss_pred --H--HHHHHhhcCcCCcc-----cccc---c---CcccccccCH--------HHHHHHHHHHHHhcccCCCCCCCHHHH
Q 035862 295 --K--LLEWVKQFPADGKK-----FSMM---I---DPRLRNQYSI--------NAARRVAKLADNCLKKNPEERPTMNQV 351 (393)
Q Consensus 295 --~--~~~~~~~~~~~~~~-----~~~~---~---~~~~~~~~~~--------~~~~~l~~li~~~l~~dp~~Rps~~~~ 351 (393)
. .+..+...|.+..- ..+. + ........+. .-++...+|+.+||++||.+|.|++++
T Consensus 255 ~dQl~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qA 334 (438)
T KOG0666|consen 255 HDQLDRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQA 334 (438)
T ss_pred HHHHHHHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHH
Confidence 1 11111122222100 0000 0 0000000000 013448899999999999999999999
Q ss_pred HHHHHHHHh
Q 035862 352 VESLKLAVQ 360 (393)
Q Consensus 352 l~~l~~~~~ 360 (393)
++|...-..
T Consensus 335 leh~yF~~d 343 (438)
T KOG0666|consen 335 LEHPYFTED 343 (438)
T ss_pred hcccccccC
Confidence 999876544
No 296
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=6.5e-40 Score=295.08 Aligned_cols=252 Identities=25% Similarity=0.346 Sum_probs=203.5
Q ss_pred CCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCc---ccHHHHHHHHHHhhcCCCCccceeeeeeecCCcc
Q 035862 73 GFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL---QGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDER 149 (393)
Q Consensus 73 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 149 (393)
+|++.+.||.|+||.||+|.+..++ ..|++|.+..... ...+.+.+|++++++++||||+++++.+...+
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~-----~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-- 73 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTK-----KMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEE-- 73 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCC-----cEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCC--
Confidence 4889999999999999999865333 4599999875432 23567888999999999999999999887665
Q ss_pred cceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccC
Q 035862 150 GIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGL 229 (393)
Q Consensus 150 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~ 229 (393)
..++|+||+.+++|.+++... ..+++..+..++.|++.||.|||++ +++|+||+|+||++++++.++|+|||+
T Consensus 74 --~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~l~d~~~ 146 (258)
T cd05578 74 --NMYLVVDLLLGGDLRYHLSQK--VKFSEEQVKFWICEIVLALEYLHSK---GIIHRDIKPDNILLDEQGHVHITDFNI 146 (258)
T ss_pred --eEEEEEeCCCCCCHHHHHHhc--CCcCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEEcCCCCEEEeeccc
Confidence 569999999999999998543 5789999999999999999999998 999999999999999999999999999
Q ss_pred CccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcCCcc
Q 035862 230 AREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKK 309 (393)
Q Consensus 230 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 309 (393)
+....... ......|+..|+|||.+.+..++.++|+||||+++|+|++|..||..........+......
T Consensus 147 ~~~~~~~~---~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~------- 216 (258)
T cd05578 147 ATKVTPDT---LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQET------- 216 (258)
T ss_pred ccccCCCc---cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHHHhcc-------
Confidence 87654332 12345688899999999888899999999999999999999999986654322222211110
Q ss_pred cccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCH--HHHHHHHH
Q 035862 310 FSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTM--NQVVESLK 356 (393)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~--~~~l~~l~ 356 (393)
.....+...+..+.+++.+||+.||.+||++ +++++|.+
T Consensus 217 --------~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~~~~~ 257 (258)
T cd05578 217 --------ADVLYPATWSTEAIDAINKLLERDPQKRLGDNLKDLKNHPY 257 (258)
T ss_pred --------ccccCcccCcHHHHHHHHHHccCChhHcCCccHHHHhcCCC
Confidence 1111222355889999999999999999999 88876643
No 297
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=3.7e-39 Score=298.01 Aligned_cols=274 Identities=27% Similarity=0.338 Sum_probs=202.7
Q ss_pred hcCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCc--ccHHHHHHHHHHhhcCCCCccceeeeeeecCCc
Q 035862 71 TNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL--QGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDE 148 (393)
Q Consensus 71 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 148 (393)
.++|++.+.||+|+||.||+|.+..++ ..||+|.+..... .....+.+|+.+++.++|+||+++++++.....
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~ 80 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTSG-----EIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHL 80 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCCC-----cEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCC
Confidence 467999999999999999999975433 4699998864322 222345679999999999999999999876543
Q ss_pred ccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeecc
Q 035862 149 RGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFG 228 (393)
Q Consensus 149 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg 228 (393)
. ..++||||+.+ +|.+++... ...+++..++.++.|++.||.|||+. +++||||||+||++++++.+||+|||
T Consensus 81 ~--~~~lv~e~~~~-~l~~~l~~~-~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~kL~dfg 153 (309)
T cd07845 81 D--SIFLVMEYCEQ-DLASLLDNM-PTPFSESQVKCLMLQLLRGLQYLHEN---FIIHRDLKVSNLLLTDKGCLKIADFG 153 (309)
T ss_pred C--eEEEEEecCCC-CHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECccc
Confidence 3 46999999964 898887543 25689999999999999999999999 99999999999999999999999999
Q ss_pred CCccCCCCCCccccccccccCCccCcccccc-CCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcCC
Q 035862 229 LAREGPTGDHTHVSTAVVGTYGYAAPEYIET-GHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADG 307 (393)
Q Consensus 229 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 307 (393)
++........ ......++..|+|||.+.+ ..++.++|||||||++|+|++|..||....+.............+...
T Consensus 154 ~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~ 231 (309)
T cd07845 154 LARTYGLPAK--PMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNES 231 (309)
T ss_pred eeeecCCccC--CCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChh
Confidence 9976543221 1223355788999998865 567899999999999999999999998655433222111111111000
Q ss_pred c--cc------ccc-cCccccc---ccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q 035862 308 K--KF------SMM-IDPRLRN---QYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLA 358 (393)
Q Consensus 308 ~--~~------~~~-~~~~~~~---~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~ 358 (393)
. .+ ... ....... ......+..+.+||.+||+.||++|||+.+++.|.|..
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h~~f~ 294 (309)
T cd07845 232 IWPGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALESSYFK 294 (309)
T ss_pred hchhhhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcChhhc
Confidence 0 00 000 0000000 00012467889999999999999999999999998875
No 298
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=2.4e-39 Score=296.96 Aligned_cols=271 Identities=24% Similarity=0.355 Sum_probs=200.5
Q ss_pred cCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCc--ccHHHHHHHHHHhhcCCCCccceeeeeeecCCcc
Q 035862 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL--QGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDER 149 (393)
Q Consensus 72 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 149 (393)
++|++.+.||.|+||.||+|.+..+ +..+++|.+..... .....+.+|+.++..++||||+++++++...+..
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~-----~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~ 79 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKT-----GEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLD 79 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCC-----CcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCC
Confidence 5689999999999999999986533 34689998865432 2233567899999999999999999998766322
Q ss_pred cceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccC
Q 035862 150 GIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGL 229 (393)
Q Consensus 150 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~ 229 (393)
..++||||+.+ +|.+++.... ..+++..++.++.|++.||.|||+. +++|+||||+||+++.++.++|+|||+
T Consensus 80 --~~~lv~e~~~~-~L~~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~~~l~d~g~ 152 (293)
T cd07843 80 --KIYMVMEYVEH-DLKSLMETMK-QPFLQSEVKCLMLQLLSGVAHLHDN---WILHRDLKTSNLLLNNRGILKICDFGL 152 (293)
T ss_pred --cEEEEehhcCc-CHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCcEEEeecCc
Confidence 66999999964 9998885433 3689999999999999999999998 999999999999999999999999999
Q ss_pred CccCCCCCCccccccccccCCccCccccccC-CCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhH-HHHHHh------
Q 035862 230 AREGPTGDHTHVSTAVVGTYGYAAPEYIETG-HLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQK-LLEWVK------ 301 (393)
Q Consensus 230 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~-~~~~~~------ 301 (393)
+........ ......+++.|+|||.+.+. .++.++|+||||+++|+|++|.+||.......... ......
T Consensus 153 ~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~ 230 (293)
T cd07843 153 AREYGSPLK--PYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKI 230 (293)
T ss_pred eeeccCCcc--ccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHH
Confidence 886543321 22334678899999988654 46889999999999999999999997654322111 111000
Q ss_pred -----hcCcCC-cccccccCcccccccCHH-HHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 035862 302 -----QFPADG-KKFSMMIDPRLRNQYSIN-AARRVAKLADNCLKKNPEERPTMNQVVESLK 356 (393)
Q Consensus 302 -----~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~ 356 (393)
.++... ..........+...++.. ++..+.++|.+||+.+|++|||+.+++.+.|
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~~~ 292 (293)
T cd07843 231 WPGFSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKHPY 292 (293)
T ss_pred HHHhhccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhcCCC
Confidence 000000 000000011111112222 4678899999999999999999999998754
No 299
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=5.2e-39 Score=289.95 Aligned_cols=257 Identities=27% Similarity=0.395 Sum_probs=207.4
Q ss_pred cCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCc-ccHHHHHHHHHHhhcCCCCccceeeeeeecCCccc
Q 035862 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL-QGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERG 150 (393)
Q Consensus 72 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 150 (393)
++|++.+.||.|++|.||+|.+..+ +..|++|.+..... .....+.+|+..+..++|+|++++++++...+
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~-----~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--- 72 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPT-----GKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEG--- 72 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCC-----CcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCC---
Confidence 3688999999999999999987643 34699999876543 34567889999999999999999999988775
Q ss_pred ceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhc-CCCCCeEeccCCCCCeEeCCCCceEEeeccC
Q 035862 151 IQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHE-GLEIQVIYRDFKTSNVLLDGNFKPKLSDFGL 229 (393)
Q Consensus 151 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~-~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~ 229 (393)
.+++||||+++++|.+++... ..+++..++.++.|++.|+.|||+ . +++|+||+|+||+++.++.++|+|||+
T Consensus 73 -~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~~l~~~l~~lh~~~---~~~H~~l~~~ni~~~~~~~~~l~df~~ 146 (264)
T cd06623 73 -EISIVLEYMDGGSLADLLKKV--GKIPEPVLAYIARQILKGLDYLHTKR---HIIHRDIKPSNLLINSKGEVKIADFGI 146 (264)
T ss_pred -eEEEEEEecCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHhccC---CCccCCCCHHHEEECCCCCEEEccCcc
Confidence 569999999999999999543 568999999999999999999999 8 999999999999999999999999999
Q ss_pred CccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcCCcc
Q 035862 230 AREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKK 309 (393)
Q Consensus 230 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 309 (393)
+......... .....++..|+|||.+.+..++.++|+||||+++|+|++|..||..................
T Consensus 147 ~~~~~~~~~~--~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~------ 218 (264)
T cd06623 147 SKVLENTLDQ--CNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAICDG------ 218 (264)
T ss_pred ceecccCCCc--ccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHhcC------
Confidence 8765432221 12456788999999999889999999999999999999999999766421111111111110
Q ss_pred cccccCcccccccCHH-HHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q 035862 310 FSMMIDPRLRNQYSIN-AARRVAKLADNCLKKNPEERPTMNQVVESLKLA 358 (393)
Q Consensus 310 ~~~~~~~~~~~~~~~~-~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~ 358 (393)
.....+.. ++..+.+++.+||..+|++||++.+++++.+..
T Consensus 219 --------~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~~~~~ 260 (264)
T cd06623 219 --------PPPSLPAEEFSPEFRDFISACLQKDPKKRPSAAELLQHPFIK 260 (264)
T ss_pred --------CCCCCCcccCCHHHHHHHHHHccCChhhCCCHHHHHhCHHHH
Confidence 00111122 567899999999999999999999999997753
No 300
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=4.3e-39 Score=294.14 Aligned_cols=255 Identities=27% Similarity=0.396 Sum_probs=201.7
Q ss_pred CCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcccHHHHHHHHHHhhcCCCCccceeeeeeecCCcccce
Q 035862 73 GFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQ 152 (393)
Q Consensus 73 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 152 (393)
.|...+.||+|++|.||++..... +..+++|.+..........+.+|+.+++.++||||+++++++...+ +
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~-----~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~----~ 90 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKST-----GRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGD----E 90 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCC-----CCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCC----e
Confidence 355567999999999999986533 3469999886554444566789999999999999999999988766 5
Q ss_pred EEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCCcc
Q 035862 153 RLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLARE 232 (393)
Q Consensus 153 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~ 232 (393)
.++++||+.+++|.+++.. ..+++..+..++.|++.||+|||++ +++||||+|+||+++.++.++|+|||.+..
T Consensus 91 ~~~v~e~~~~~~L~~~~~~---~~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~ 164 (285)
T cd06648 91 LWVVMEFLEGGALTDIVTH---TRMNEEQIATVCLAVLKALSFLHAQ---GVIHRDIKSDSILLTSDGRVKLSDFGFCAQ 164 (285)
T ss_pred EEEEEeccCCCCHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChhhEEEcCCCcEEEcccccchh
Confidence 5999999999999998854 4588999999999999999999998 999999999999999999999999998865
Q ss_pred CCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcCCccccc
Q 035862 233 GPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKFSM 312 (393)
Q Consensus 233 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (393)
...... ......|+..|+|||.+.+..++.++|||||||++|+|++|..||....+...... ......
T Consensus 165 ~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~---~~~~~~------- 232 (285)
T cd06648 165 VSKEVP--RRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKR---IRDNLP------- 232 (285)
T ss_pred hccCCc--ccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHHH---HHhcCC-------
Confidence 432211 12335688999999999888899999999999999999999999976543221111 111000
Q ss_pred ccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHH
Q 035862 313 MIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAV 359 (393)
Q Consensus 313 ~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~~ 359 (393)
+... ....++..+.+|+.+||+.+|++||++.+++++.+...
T Consensus 233 ---~~~~--~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~ 274 (285)
T cd06648 233 ---PKLK--NLHKVSPRLRSFLDRMLVRDPAQRATAAELLNHPFLAK 274 (285)
T ss_pred ---CCCc--ccccCCHHHHHHHHHHcccChhhCcCHHHHccCccccc
Confidence 0000 01124578999999999999999999999999876543
No 301
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=1.1e-38 Score=289.44 Aligned_cols=263 Identities=25% Similarity=0.432 Sum_probs=201.5
Q ss_pred CcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCC--cccHHHHHHHHHHhhcCCCCccceeeeeeecCCccc-
Q 035862 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG--LQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERG- 150 (393)
Q Consensus 74 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~- 150 (393)
|.+.+.||+|+||.||+|.+... .+.+..+|+|.+.... ......+.+|+.+++.++||||+++++++......+
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~--~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 78 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSE--DGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGR 78 (273)
T ss_pred CcchhcccCCCCCCEEeeEeecc--CCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCc
Confidence 56778899999999999986532 2345679999886542 233456788999999999999999999886644322
Q ss_pred -ceEEEEEeecCCCChHHHHhhc----CCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEe
Q 035862 151 -IQRLLVYEYMPNRSLEDRLFSR----AQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLS 225 (393)
Q Consensus 151 -~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~ 225 (393)
...+++++|+.+++|.+++... ....+++..++.++.|++.||+|||+. +|+||||||+||++++++.+||+
T Consensus 79 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~nili~~~~~~kl~ 155 (273)
T cd05074 79 LPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSK---NFIHRDLAARNCMLNENMTVCVA 155 (273)
T ss_pred ccceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccchhhEEEcCCCCEEEC
Confidence 2347889999999999887432 123578889999999999999999998 99999999999999999999999
Q ss_pred eccCCccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHh-CCCccCCCCchhhhHHHHHHhhcC
Q 035862 226 DFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILT-GRRVLERNRPTMEQKLLEWVKQFP 304 (393)
Q Consensus 226 Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~ 304 (393)
|||++................+++.|++||.+.+..++.++|||||||++|+|++ |.+||....... ........
T Consensus 156 dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~---~~~~~~~~- 231 (273)
T cd05074 156 DFGLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSE---IYNYLIKG- 231 (273)
T ss_pred cccccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHH---HHHHHHcC-
Confidence 9999886543322222233345678999999988889999999999999999999 888886543321 11111110
Q ss_pred cCCcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q 035862 305 ADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLA 358 (393)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~ 358 (393)
... ..+...+..+.+++.+||+.+|++|||+.+++..|+.+
T Consensus 232 ---~~~----------~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 232 ---NRL----------KQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred ---CcC----------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 000 01112457899999999999999999999999999865
No 302
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=3.5e-39 Score=293.53 Aligned_cols=250 Identities=29% Similarity=0.439 Sum_probs=197.7
Q ss_pred ecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCc---ccHHHHHHHHHHhhcCCCCccceeeeeeecCCcccceEEEE
Q 035862 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL---QGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLV 156 (393)
Q Consensus 80 lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv 156 (393)
||+|+||+||+|.+..+ +..|++|.+..... .....+.+|+++++.++||||+++++.+...+ ..|+|
T Consensus 1 lg~g~~g~vy~~~~~~~-----~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~----~~~lv 71 (277)
T cd05577 1 LGKGGFGEVCACQVKAT-----GKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKD----DLCLV 71 (277)
T ss_pred CCCCCceeEEEEEEcCC-----CcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCC----eEEEE
Confidence 68999999999986543 34699998865321 22345678999999999999999999987765 56999
Q ss_pred EeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCCccCCCC
Q 035862 157 YEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTG 236 (393)
Q Consensus 157 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~ 236 (393)
|||+++++|.+++.......+++..++.++.|++.||.|||+. +++||||+|+||++++++.++|+|||.+......
T Consensus 72 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~ 148 (277)
T cd05577 72 MTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQR---RIVYRDLKPENVLLDDHGNVRISDLGLAVELKGG 148 (277)
T ss_pred EecCCCCcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEccCcchhhhccC
Confidence 9999999999999765555789999999999999999999998 9999999999999999999999999998754321
Q ss_pred CCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcCCcccccccCc
Q 035862 237 DHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKFSMMIDP 316 (393)
Q Consensus 237 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (393)
. ......++..|+|||.+.+..++.++||||||+++|+|++|+.||.............. ....
T Consensus 149 ~---~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~--~~~~----------- 212 (277)
T cd05577 149 K---KIKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKR--RTLE----------- 212 (277)
T ss_pred C---ccccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHh--cccc-----------
Confidence 1 12344678899999999888899999999999999999999999976543211111110 0000
Q ss_pred ccccccCHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHHHHHH
Q 035862 317 RLRNQYSINAARRVAKLADNCLKKNPEERP-----TMNQVVESLKLA 358 (393)
Q Consensus 317 ~~~~~~~~~~~~~l~~li~~~l~~dp~~Rp-----s~~~~l~~l~~~ 358 (393)
.....+...+..+.+++.+||+.||.+|| ++.+++.|.|..
T Consensus 213 -~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~h~~~~ 258 (277)
T cd05577 213 -MAVEYPDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVREHPLFK 258 (277)
T ss_pred -ccccCCccCCHHHHHHHHHHccCChhHccCCCcccHHHHHhChhhh
Confidence 01112223467899999999999999999 888899988763
No 303
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=7.6e-39 Score=288.96 Aligned_cols=256 Identities=30% Similarity=0.439 Sum_probs=201.2
Q ss_pred CCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcc--cHHHHHHHHHHhhcCCCCccceeeeeeecCCccc
Q 035862 73 GFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQ--GHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERG 150 (393)
Q Consensus 73 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 150 (393)
+|.+.+.||+|+||.||+|..... +..|++|.+...... ....+.+|+.+++.++|+||+++++++...+
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~-----~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~--- 72 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDT-----GELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHRE--- 72 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCC-----CcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCC---
Confidence 588899999999999999986433 346999998765432 4567889999999999999999999987665
Q ss_pred ceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCC
Q 035862 151 IQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLA 230 (393)
Q Consensus 151 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a 230 (393)
..++|+||+.+++|.+++.. ...+++..+..++.|++.||.|||+. +++|+||+|+||++++++.+||+|||++
T Consensus 73 -~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~kl~d~g~~ 146 (264)
T cd06626 73 -KVYIFMEYCSGGTLEELLEH--GRILDEHVIRVYTLQLLEGLAYLHSH---GIVHRDIKPANIFLDHNGVIKLGDFGCA 146 (264)
T ss_pred -EEEEEEecCCCCcHHHHHhh--cCCCChHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEcccccc
Confidence 56999999999999999853 34578899999999999999999998 9999999999999999999999999998
Q ss_pred ccCCCCCCccc--cccccccCCccCccccccCC---CCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCc
Q 035862 231 REGPTGDHTHV--STAVVGTYGYAAPEYIETGH---LKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPA 305 (393)
Q Consensus 231 ~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~---~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~ 305 (393)
........... .....++..|+|||.+.+.. ++.++||||||+++|++++|..||............ ... .
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~~--~~~--~ 222 (264)
T cd06626 147 VKLKNNTTTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFH--VGA--G 222 (264)
T ss_pred cccCCCCCcccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHHHH--Hhc--C
Confidence 76543322110 12356788999999998766 889999999999999999999999754322221111 000 0
Q ss_pred CCcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 035862 306 DGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLK 356 (393)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~ 356 (393)
. .+.+. ....++..+.+++.+||+.+|.+||++.+++.+.|
T Consensus 223 ~--------~~~~~--~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~~~ 263 (264)
T cd06626 223 H--------KPPIP--DSLQLSPEGKDFLDRCLESDPKKRPTASELLQHPF 263 (264)
T ss_pred C--------CCCCC--cccccCHHHHHHHHHHccCCcccCCCHHHHhcCCC
Confidence 0 00000 01123677889999999999999999999998754
No 304
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=4.2e-39 Score=298.51 Aligned_cols=275 Identities=22% Similarity=0.300 Sum_probs=200.5
Q ss_pred CCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCC---cccHHHHHHHHHHhhcCCCCccceeeeeeecCCcc
Q 035862 73 GFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG---LQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDER 149 (393)
Q Consensus 73 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 149 (393)
+|++.+.||+|+||.||+|.+... +.+..||+|.+.... ......+.+|+.+++.++||||+++++++......
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~---~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 77 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNG---KDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADK 77 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCC---CCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCc
Confidence 488899999999999999997541 245579999988632 33345677899999999999999999999876333
Q ss_pred cceEEEEEeecCCCChHHHHhhc---CCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCC----CCce
Q 035862 150 GIQRLLVYEYMPNRSLEDRLFSR---AQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDG----NFKP 222 (393)
Q Consensus 150 ~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~----~~~~ 222 (393)
..++||||+.+ +|.+++... ....+++..++.++.|++.||.|||+. +++||||||+||+++. ++.+
T Consensus 78 --~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~h~dlkp~Nil~~~~~~~~~~~ 151 (316)
T cd07842 78 --SVYLLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSN---WVLHRDLKPANILVMGEGPERGVV 151 (316)
T ss_pred --eEEEEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEEcCCCCccceE
Confidence 67999999965 777766422 223689999999999999999999998 9999999999999999 8999
Q ss_pred EEeeccCCccCCCCCC-ccccccccccCCccCcccccc-CCCCchhhHHHHHHHHHHHHhCCCccCCCCchh-------h
Q 035862 223 KLSDFGLAREGPTGDH-THVSTAVVGTYGYAAPEYIET-GHLKSQSDIWSFGVVLYEILTGRRVLERNRPTM-------E 293 (393)
Q Consensus 223 kl~Dfg~a~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslGvil~elltg~~pf~~~~~~~-------~ 293 (393)
||+|||++........ ........++..|+|||++.+ ..++.++|||||||++|+|++|.+||....... .
T Consensus 152 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 231 (316)
T cd07842 152 KIGDLGLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQR 231 (316)
T ss_pred EECCCccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHH
Confidence 9999999886543322 112234567889999998866 457899999999999999999999997554322 0
Q ss_pred hHHHHHHhhcCcCCc----------cccc----ccC-----cccccccCH--HHHHHHHHHHHHhcccCCCCCCCHHHHH
Q 035862 294 QKLLEWVKQFPADGK----------KFSM----MID-----PRLRNQYSI--NAARRVAKLADNCLKKNPEERPTMNQVV 352 (393)
Q Consensus 294 ~~~~~~~~~~~~~~~----------~~~~----~~~-----~~~~~~~~~--~~~~~l~~li~~~l~~dp~~Rps~~~~l 352 (393)
..+......+..... .... ... ..+...... ..+.++.+++.+||+.||++|||+.+++
T Consensus 232 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil 311 (316)
T cd07842 232 DQLERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEAL 311 (316)
T ss_pred HHHHHHHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHh
Confidence 111111111000000 0000 000 000000111 2446789999999999999999999999
Q ss_pred HHHH
Q 035862 353 ESLK 356 (393)
Q Consensus 353 ~~l~ 356 (393)
+|.|
T Consensus 312 ~~~~ 315 (316)
T cd07842 312 EHPY 315 (316)
T ss_pred cCCC
Confidence 8854
No 305
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=1.1e-38 Score=290.12 Aligned_cols=254 Identities=27% Similarity=0.389 Sum_probs=202.3
Q ss_pred CCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCC-cccHHHHHHHHHHhhcCCCCccceeeeeeecCCcccc
Q 035862 73 GFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG-LQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGI 151 (393)
Q Consensus 73 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 151 (393)
-|+..+.||.|+||.||+|.+... +..+|+|...... ......+.+|+.+++.++||||+++++++...+
T Consensus 5 ~~~~~~~ig~G~~~~vy~~~~~~~-----~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~---- 75 (277)
T cd06641 5 LFTKLEKIGKGSFGEVFKGIDNRT-----QKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDT---- 75 (277)
T ss_pred hhhhheeEeecCCeEEEEEEECCC-----CcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCC----
Confidence 377888999999999999986433 3469999876443 233456778999999999999999999998766
Q ss_pred eEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCCc
Q 035862 152 QRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAR 231 (393)
Q Consensus 152 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~ 231 (393)
..++||||+.+++|.+++.. ..+++..+..++.|++.|+.+||+. +++|+||+|+||+++.++.++|+|||++.
T Consensus 76 ~~~lv~e~~~~~~l~~~i~~---~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~ 149 (277)
T cd06641 76 KLWIIMEYLGGGSALDLLEP---GPLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAG 149 (277)
T ss_pred eEEEEEEeCCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHccC---CeecCCCCHHhEEECCCCCEEEeecccce
Confidence 56999999999999998842 3578999999999999999999998 99999999999999999999999999987
Q ss_pred cCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcCCcccc
Q 035862 232 EGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKFS 311 (393)
Q Consensus 232 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (393)
....... ......++..|+|||.+.+..++.++|+|||||++|+|++|..||.......... .... .
T Consensus 150 ~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~---~~~~---~----- 216 (277)
T cd06641 150 QLTDTQI--KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMKVLF---LIPK---N----- 216 (277)
T ss_pred ecccchh--hhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHHHHH---HHhc---C-----
Confidence 5433211 1233467889999999988889999999999999999999999997543221111 1100 0
Q ss_pred cccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHh
Q 035862 312 MMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQ 360 (393)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~~~ 360 (393)
........++.++.+++.+||+.+|.+||++.+++.|.+....
T Consensus 217 ------~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~~~~ 259 (277)
T cd06641 217 ------NPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFIVRF 259 (277)
T ss_pred ------CCCCCCcccCHHHHHHHHHHccCChhhCcCHHHHHhCHHHhhh
Confidence 0011122345778999999999999999999999999776543
No 306
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=7.7e-39 Score=292.04 Aligned_cols=259 Identities=28% Similarity=0.405 Sum_probs=197.4
Q ss_pred cCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCc-ccHHHHHHHHHH-hhcCCCCccceeeeeeecCCcc
Q 035862 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL-QGHKQWLAEVQF-LGVVSHPNLVKLLGYCSTEDER 149 (393)
Q Consensus 72 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~-l~~l~h~niv~~~~~~~~~~~~ 149 (393)
++|++.+.||+|+||.||+|.+..+ +..||+|.+..... .....+..|+.+ ++..+||||+++++++...+
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~-----~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~-- 73 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPT-----GTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREG-- 73 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCC-----CcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCC--
Confidence 4689999999999999999986543 45699999876432 223445556665 56678999999999998766
Q ss_pred cceEEEEEeecCCCChHHHHhhc--CCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeec
Q 035862 150 GIQRLLVYEYMPNRSLEDRLFSR--AQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDF 227 (393)
Q Consensus 150 ~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Df 227 (393)
..+++|||++ ++|.+++... ....+++..++.++.|++.||.|||++ .+++||||||+||+++.++.+||+||
T Consensus 74 --~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~--~~i~h~dlkp~nil~~~~~~~kl~df 148 (283)
T cd06617 74 --DVWICMEVMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSK--LSVIHRDVKPSNVLINRNGQVKLCDF 148 (283)
T ss_pred --cEEEEhhhhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhc--CCeecCCCCHHHEEECCCCCEEEeec
Confidence 4599999996 5888877542 335689999999999999999999974 38999999999999999999999999
Q ss_pred cCCccCCCCCCccccccccccCCccCcccccc----CCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhc
Q 035862 228 GLAREGPTGDHTHVSTAVVGTYGYAAPEYIET----GHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQF 303 (393)
Q Consensus 228 g~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~ 303 (393)
|++....... ......++..|+|||.+.+ ..++.++|+|||||++|+|++|..||.......+. ........
T Consensus 149 g~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~-~~~~~~~~ 224 (283)
T cd06617 149 GISGYLVDSV---AKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQ-LKQVVEEP 224 (283)
T ss_pred cccccccccc---ccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHH-HHHHHhcC
Confidence 9987643221 1233467889999998865 45688999999999999999999999653322111 11111100
Q ss_pred CcCCcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHh
Q 035862 304 PADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQ 360 (393)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~~~ 360 (393)
. ... ....++.++.+|+.+||..+|.+||++.+++++.|....
T Consensus 225 ~-----------~~~---~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~~ 267 (283)
T cd06617 225 S-----------PQL---PAEKFSPEFQDFVNKCLKKNYKERPNYPELLQHPFFELH 267 (283)
T ss_pred C-----------CCC---CccccCHHHHHHHHHHccCChhhCcCHHHHhcCchhhhc
Confidence 0 000 011246789999999999999999999999999887764
No 307
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=1.2e-38 Score=292.36 Aligned_cols=263 Identities=18% Similarity=0.177 Sum_probs=189.3
Q ss_pred cCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcccHH-----------HHHHHHHHhhcCCCCccceee
Q 035862 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHK-----------QWLAEVQFLGVVSHPNLVKLL 140 (393)
Q Consensus 72 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~-----------~~~~E~~~l~~l~h~niv~~~ 140 (393)
++|.+.++||+|+||.||+|.+..+.. ....+++|........... ....+...+..+.|+|+++++
T Consensus 12 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~--~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~ 89 (294)
T PHA02882 12 KEWKIDKLIGCGGFGCVYETQCASDHC--INNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYY 89 (294)
T ss_pred CceEEeeEEecCCCceEEEEEEcCCcc--cccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEE
Confidence 579999999999999999998754421 1234666654332211111 112334455667899999999
Q ss_pred eeeecCCcccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCC
Q 035862 141 GYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNF 220 (393)
Q Consensus 141 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~ 220 (393)
+.+........+.+++++++ ..++.+.+.. ....++..++.++.|++.||.|||+. +++||||||+|||++.++
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~---~iiHrDiKp~Nill~~~~ 163 (294)
T PHA02882 90 GCGSFKRCRMYYRFILLEKL-VENTKEIFKR--IKCKNKKLIKNIMKDMLTTLEYIHEH---GISHGDIKPENIMVDGNN 163 (294)
T ss_pred EeeeEecCCceEEEEEEehh-ccCHHHHHHh--hccCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCC
Confidence 97766554444557888887 4477766632 23357888999999999999999998 999999999999999999
Q ss_pred ceEEeeccCCccCCCCCCc-----cccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhH
Q 035862 221 KPKLSDFGLAREGPTGDHT-----HVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQK 295 (393)
Q Consensus 221 ~~kl~Dfg~a~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~ 295 (393)
.++|+|||+++........ .......||+.|+|||++.+..++.++|||||||++|||++|..||..........
T Consensus 164 ~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~ 243 (294)
T PHA02882 164 RGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLI 243 (294)
T ss_pred cEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHH
Confidence 9999999999765322111 11223469999999999999999999999999999999999999997653322111
Q ss_pred ---HHHHHhhcCcCCcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 035862 296 ---LLEWVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESL 355 (393)
Q Consensus 296 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l 355 (393)
........... .. ....++..+.+++..||..+|++||++.++.+.+
T Consensus 244 ~~~~~~~~~~~~~~----------~~---~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~ 293 (294)
T PHA02882 244 HAAKCDFIKRLHEG----------KI---KIKNANKFIYDFIECVTKLSYEEKPDYDALIKIF 293 (294)
T ss_pred HHhHHHHHHHhhhh----------hh---ccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhh
Confidence 11111111110 00 0112457899999999999999999999999865
No 308
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=5.6e-39 Score=293.02 Aligned_cols=266 Identities=26% Similarity=0.360 Sum_probs=198.8
Q ss_pred CcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCc--ccHHHHHHHHHHhhcCCCCccceeeeeeecCCcccc
Q 035862 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL--QGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGI 151 (393)
Q Consensus 74 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 151 (393)
|++.+.||.|++|.||+|.+..+ +..|++|.+..... .....+.+|+.+++.++|||++++++++...+
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~-----~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~---- 71 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLT-----GEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSEN---- 71 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCC-----CCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCC----
Confidence 67788999999999999986543 34699998865431 22356778999999999999999999988765
Q ss_pred eEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCCc
Q 035862 152 QRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAR 231 (393)
Q Consensus 152 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~ 231 (393)
..+++|||++ ++|.+++.......+++..++.++.|++.||.|||+. +++||||+|+||+++.++.++|+|||++.
T Consensus 72 ~~~iv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~---~~~H~dl~p~nil~~~~~~~~l~df~~~~ 147 (283)
T cd07835 72 KLYLVFEFLD-LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSH---RVLHRDLKPQNLLIDREGALKLADFGLAR 147 (283)
T ss_pred eEEEEEeccC-cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCcEEEeeccccc
Confidence 5699999995 6999988655545689999999999999999999998 99999999999999999999999999987
Q ss_pred cCCCCCCccccccccccCCccCccccccC-CCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhH-HHHHHhhcCcCC--
Q 035862 232 EGPTGDHTHVSTAVVGTYGYAAPEYIETG-HLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQK-LLEWVKQFPADG-- 307 (393)
Q Consensus 232 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~-~~~~~~~~~~~~-- 307 (393)
....... ......++..|+|||++.+. .++.++||||||+++|+|++|..||.......+.. ..... ..+...
T Consensus 148 ~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~-~~~~~~~~ 224 (283)
T cd07835 148 AFGVPVR--TYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTL-GTPDEDVW 224 (283)
T ss_pred ccCCCcc--ccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHh-CCCChHHh
Confidence 5432211 12234568899999988654 57899999999999999999999997654432211 11110 000000
Q ss_pred ----------cccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 035862 308 ----------KKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLK 356 (393)
Q Consensus 308 ----------~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~ 356 (393)
..+....... ........+..+.+++.+||+.||.+||++++++++.|
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~ 282 (283)
T cd07835 225 PGVTSLPDYKPTFPKWARQD-LSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQHPY 282 (283)
T ss_pred hhhhhchhhhhhcccccccc-hhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcCCC
Confidence 0000000000 01111234578899999999999999999999998754
No 309
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=1e-38 Score=293.01 Aligned_cols=272 Identities=25% Similarity=0.330 Sum_probs=199.9
Q ss_pred cCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCc--ccHHHHHHHHHHhhcCCCCccceeeeeeecCCcc
Q 035862 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL--QGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDER 149 (393)
Q Consensus 72 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 149 (393)
++|++.+.||.|++|.||+|.+..+ +..|++|.+..... .....+.+|+.+++.++||||+++++++....
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~-----~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-- 74 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVT-----NETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEK-- 74 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCC-----CcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCC--
Confidence 5799999999999999999986533 34699998865422 23356778999999999999999999998765
Q ss_pred cceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCC-CCceEEeecc
Q 035862 150 GIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDG-NFKPKLSDFG 228 (393)
Q Consensus 150 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~-~~~~kl~Dfg 228 (393)
..++||||++ ++|.+++.......+++..++.++.||+.||+|||++ +++|+||+|+||+++. ++.+||+|||
T Consensus 75 --~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dl~p~nill~~~~~~~kl~dfg 148 (294)
T PLN00009 75 --RLYLVFEYLD-LDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSH---RVLHRDLKPQNLLIDRRTNALKLADFG 148 (294)
T ss_pred --eEEEEEeccc-ccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCcceEEEECCCCEEEEcccc
Confidence 5699999995 5888887555545568888999999999999999998 9999999999999985 5679999999
Q ss_pred CCccCCCCCCccccccccccCCccCcccccc-CCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcCC
Q 035862 229 LAREGPTGDHTHVSTAVVGTYGYAAPEYIET-GHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADG 307 (393)
Q Consensus 229 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 307 (393)
++....... .......+++.|+|||++.+ ..++.++|||||||++|+|+||..||.......+..........+...
T Consensus 149 ~~~~~~~~~--~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~ 226 (294)
T PLN00009 149 LARAFGIPV--RTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEE 226 (294)
T ss_pred cccccCCCc--cccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChh
Confidence 997543221 11233467889999998866 457899999999999999999999997654332211110000111000
Q ss_pred c-----cccccc--Cccccc----ccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q 035862 308 K-----KFSMMI--DPRLRN----QYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLA 358 (393)
Q Consensus 308 ~-----~~~~~~--~~~~~~----~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~ 358 (393)
. ...... .+.... ......+..+.+++.+||+.+|++||++.+++++.|..
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~~~~~ 288 (294)
T PLN00009 227 TWPGVTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEHEYFK 288 (294)
T ss_pred hccccccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcCchHh
Confidence 0 000000 000000 01123457789999999999999999999999987654
No 310
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=2.1e-38 Score=287.04 Aligned_cols=254 Identities=23% Similarity=0.397 Sum_probs=198.0
Q ss_pred CCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCC----------cccHHHHHHHHHHhhc-CCCCccceeee
Q 035862 73 GFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG----------LQGHKQWLAEVQFLGV-VSHPNLVKLLG 141 (393)
Q Consensus 73 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~----------~~~~~~~~~E~~~l~~-l~h~niv~~~~ 141 (393)
+|++.+.||+|+||.||+|.+... ....+++|.+.... ......+.+|+.++.. ++||||+++++
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~----~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~ 76 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNN----GQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYK 76 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCC----CCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEe
Confidence 478889999999999999997541 23468999875321 1223446678887765 78999999999
Q ss_pred eeecCCcccceEEEEEeecCCCChHHHHhh--cCCCCCCHHHHHHHHHHHHHHHHHhhc-CCCCCeEeccCCCCCeEeCC
Q 035862 142 YCSTEDERGIQRLLVYEYMPNRSLEDRLFS--RAQPTLPWKTRLEIILGAAEGLAYLHE-GLEIQVIYRDFKTSNVLLDG 218 (393)
Q Consensus 142 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~i~~ql~~~l~~LH~-~~~~~ivH~Dikp~NIll~~ 218 (393)
++...+ ..+++|||+++++|.+++.. .....+++..++.++.|++.||.|||+ . +++|+||+|+||+++.
T Consensus 77 ~~~~~~----~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~---~i~H~dl~~~nil~~~ 149 (269)
T cd08528 77 TFLEND----RLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEK---RIVHRDLTPNNIMLGE 149 (269)
T ss_pred eEccCC----eEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCC---ceeecCCCHHHEEECC
Confidence 998766 56999999999999998743 234568999999999999999999996 5 8999999999999999
Q ss_pred CCceEEeeccCCccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHH
Q 035862 219 NFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLE 298 (393)
Q Consensus 219 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~ 298 (393)
++.++|+|||++....... ......|+..|+|||.+.+..++.++|+||||+++|+|++|+.||...........
T Consensus 150 ~~~~~l~dfg~~~~~~~~~---~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~~~-- 224 (269)
T cd08528 150 DDKVTITDFGLAKQKQPES---KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLATK-- 224 (269)
T ss_pred CCcEEEecccceeeccccc---ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHHHHHHH--
Confidence 9999999999997644332 22345788899999999988899999999999999999999999965433211111
Q ss_pred HHhhcCcCCcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 035862 299 WVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLK 356 (393)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~ 356 (393)
.... ..........+..+.+++.+||+.||++||++.++..++.
T Consensus 225 -~~~~-------------~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~ 268 (269)
T cd08528 225 -IVEA-------------VYEPLPEGMYSEDVTDVITSCLTPDAEARPDIIQVSAMIS 268 (269)
T ss_pred -Hhhc-------------cCCcCCcccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence 1000 0000011124577899999999999999999999998764
No 311
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=2.9e-39 Score=302.17 Aligned_cols=275 Identities=27% Similarity=0.356 Sum_probs=200.7
Q ss_pred hcCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCC-cccHHHHHHHHHHhhcCCCCccceeeeeeecCCc-
Q 035862 71 TNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG-LQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDE- 148 (393)
Q Consensus 71 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~- 148 (393)
.++|++.+.||+|+||.||+|.+..++ ..||+|.+.... ......+.+|+.+++.++||||+++++++.....
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 78 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTG-----VKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFE 78 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCC-----CeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeeccccc
Confidence 468999999999999999999875433 469999986432 2234557789999999999999999998765442
Q ss_pred ccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeecc
Q 035862 149 RGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFG 228 (393)
Q Consensus 149 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg 228 (393)
.....++|+||+. ++|.+++. ...+++..++.++.|++.||.|||+. +++||||||+||+++.++.+||+|||
T Consensus 79 ~~~~~~lv~e~~~-~~l~~~~~---~~~l~~~~~~~i~~ql~~aL~~LH~~---~ivH~dlkp~Nill~~~~~~kl~dfg 151 (336)
T cd07849 79 SFNDVYIVQELME-TDLYKLIK---TQHLSNDHIQYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTNCDLKICDFG 151 (336)
T ss_pred ccceEEEEehhcc-cCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEECccc
Confidence 2235699999995 48887773 24589999999999999999999998 99999999999999999999999999
Q ss_pred CCccCCCCCCcc-ccccccccCCccCcccccc-CCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcC
Q 035862 229 LAREGPTGDHTH-VSTAVVGTYGYAAPEYIET-GHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPAD 306 (393)
Q Consensus 229 ~a~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~ 306 (393)
++.......... ......|+..|+|||.+.+ ..++.++|||||||++|+|++|+.||..................+..
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~ 231 (336)
T cd07849 152 LARIADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQ 231 (336)
T ss_pred ceeeccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCH
Confidence 987643322111 1233578899999998754 56899999999999999999999999765432211111000000000
Q ss_pred CcccccccC-----------cccccc---cCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q 035862 307 GKKFSMMID-----------PRLRNQ---YSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLA 358 (393)
Q Consensus 307 ~~~~~~~~~-----------~~~~~~---~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~ 358 (393)
.....+.+ ...... .....+.++.+++.+||+.||++|||+.++++|.+..
T Consensus 232 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~ 296 (336)
T cd07849 232 -EDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLE 296 (336)
T ss_pred -HHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCcccc
Confidence 00000000 000000 0112357799999999999999999999999997654
No 312
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=1e-38 Score=291.86 Aligned_cols=260 Identities=28% Similarity=0.398 Sum_probs=208.3
Q ss_pred HHhcCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcccHHHHHHHHHHhhcCCCCccceeeeeeecCCc
Q 035862 69 EATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDE 148 (393)
Q Consensus 69 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 148 (393)
...+.|+....||+|++|.||+|.+... +..+++|++..... ....+.+|+++++.++|+|++++++.+...+
T Consensus 16 ~~~~~~~~~~~l~~g~~~~v~~~~~~~~-----~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~- 88 (286)
T cd06614 16 DPRELYKNLEKIGEGASGEVYKATDRAT-----GKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYLVGD- 88 (286)
T ss_pred CccccchHhHhccCCCCeEEEEEEEccC-----CcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEEECC-
Confidence 3466799999999999999999987533 34599999876543 4566788999999999999999999998776
Q ss_pred ccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeecc
Q 035862 149 RGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFG 228 (393)
Q Consensus 149 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg 228 (393)
..++|+||+++++|.+++.... ..+++..++.++.|++.||.|||+. |++|+||+|+||+++.++.++|+|||
T Consensus 89 ---~~~lv~e~~~~~~L~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~lH~~---gi~H~dl~p~ni~i~~~~~~~l~d~~ 161 (286)
T cd06614 89 ---ELWVVMEYMDGGSLTDIITQNF-VRMNEPQIAYVCREVLQGLEYLHSQ---NVIHRDIKSDNILLSKDGSVKLADFG 161 (286)
T ss_pred ---EEEEEEeccCCCcHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCChhhEEEcCCCCEEECccc
Confidence 5699999999999999996543 3689999999999999999999998 99999999999999999999999999
Q ss_pred CCccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcCCc
Q 035862 229 LAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGK 308 (393)
Q Consensus 229 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 308 (393)
++........ ......++..|+|||.+.+..++.++|+|||||++|+|++|..||....+....... ......
T Consensus 162 ~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~~--~~~~~~--- 234 (286)
T cd06614 162 FAAQLTKEKS--KRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLI--TTKGIP--- 234 (286)
T ss_pred hhhhhccchh--hhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHHHH--HhcCCC---
Confidence 8865433221 122345788999999998888999999999999999999999999765443221111 110000
Q ss_pred ccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHH
Q 035862 309 KFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAV 359 (393)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~~ 359 (393)
.......++..+.+++.+||+.+|.+||++.+++.+.+...
T Consensus 235 ----------~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~ 275 (286)
T cd06614 235 ----------PLKNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQHPFLKK 275 (286)
T ss_pred ----------CCcchhhCCHHHHHHHHHHhccChhhCcCHHHHhhChHhhc
Confidence 00011124578999999999999999999999999887654
No 313
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=6.6e-39 Score=289.19 Aligned_cols=248 Identities=27% Similarity=0.385 Sum_probs=198.8
Q ss_pred ecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCc---ccHHHHHHHHHHhhcCCCCccceeeeeeecCCcccceEEEE
Q 035862 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL---QGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLV 156 (393)
Q Consensus 80 lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv 156 (393)
||.|++|.||+|.+... +..+++|.+..... .....+.+|+.+++.++||||+++++.+.... ..+++
T Consensus 1 lg~g~~~~v~~~~~~~~-----~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----~~~lv 71 (262)
T cd05572 1 LGVGGFGRVELVKVKSK-----NRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKK----YIYML 71 (262)
T ss_pred CCCCCceEEEEEEECCC-----CcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCC----ccEEE
Confidence 69999999999997543 34699999875432 23456888999999999999999999987665 45999
Q ss_pred EeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCCccCCCC
Q 035862 157 YEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTG 236 (393)
Q Consensus 157 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~ 236 (393)
|||+++++|.+++.. ...+++..+..++.|++.||.|||++ +++|+||+|+||+++.++.++|+|||++......
T Consensus 72 ~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~~i~~~l~~lH~~---~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~ 146 (262)
T cd05572 72 MEYCLGGELWTILRD--RGLFDEYTARFYIACVVLAFEYLHNR---GIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSG 146 (262)
T ss_pred EecCCCCcHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEEcCCCCEEEeeCCcccccCcc
Confidence 999999999999954 34588999999999999999999998 9999999999999999999999999999865443
Q ss_pred CCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcCCcccccccCc
Q 035862 237 DHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKFSMMIDP 316 (393)
Q Consensus 237 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (393)
. ......++..|+|||.+.+..++.++|+||+|+++|+|++|..||................ .
T Consensus 147 ~---~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~--------------~ 209 (262)
T cd05572 147 Q---KTWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILK--------------G 209 (262)
T ss_pred c---ccccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHHhc--------------c
Confidence 2 1233568899999999988889999999999999999999999997654311111111110 0
Q ss_pred ccccccCHHHHHHHHHHHHHhcccCCCCCCC-----HHHHHHHHHHH
Q 035862 317 RLRNQYSINAARRVAKLADNCLKKNPEERPT-----MNQVVESLKLA 358 (393)
Q Consensus 317 ~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps-----~~~~l~~l~~~ 358 (393)
......+...+.++.+++.+||+.+|++||+ ++++++|.|.-
T Consensus 210 ~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~~~~~~ 256 (262)
T cd05572 210 NGKLEFPNYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKKHKWFN 256 (262)
T ss_pred CCCCCCCcccCHHHHHHHHHHccCChhhCcCCcccCHHHHhcChhhh
Confidence 0111122233678999999999999999999 99999998853
No 314
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=2.8e-39 Score=302.41 Aligned_cols=274 Identities=25% Similarity=0.344 Sum_probs=203.5
Q ss_pred hcCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCC--CcccHHHHHHHHHHhhcCCCCccceeeeeeecCCc
Q 035862 71 TNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNH--GLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDE 148 (393)
Q Consensus 71 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 148 (393)
.++|.+.+.||+|+||+||+|.+..+ +..|++|.+... .......+.+|+.+++.++|+||+++++++.....
T Consensus 4 ~~~y~~~~~lg~G~~~~vy~~~~~~~-----~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~ 78 (337)
T cd07858 4 DTKYVPIKPIGRGAYGIVCSAKNSET-----NEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHR 78 (337)
T ss_pred ccceeEEEEeccCCCeEEEEEEecCC-----CCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccc
Confidence 45799999999999999999986543 346999988653 22234566789999999999999999998765432
Q ss_pred -ccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeec
Q 035862 149 -RGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDF 227 (393)
Q Consensus 149 -~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Df 227 (393)
.....++||||+. ++|.+++. ....+++..+..++.|++.||.|||++ +++||||||+||+++.++.+||+||
T Consensus 79 ~~~~~~~lv~e~~~-~~L~~~~~--~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dlkp~Nil~~~~~~~kL~Df 152 (337)
T cd07858 79 EAFNDVYIVYELMD-TDLHQIIR--SSQTLSDDHCQYFLYQLLRGLKYIHSA---NVLHRDLKPSNLLLNANCDLKICDF 152 (337)
T ss_pred cccCcEEEEEeCCC-CCHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECcC
Confidence 1124699999995 68988884 345689999999999999999999998 9999999999999999999999999
Q ss_pred cCCccCCCCCCccccccccccCCccCcccccc-CCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcC
Q 035862 228 GLAREGPTGDHTHVSTAVVGTYGYAAPEYIET-GHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPAD 306 (393)
Q Consensus 228 g~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~ 306 (393)
|++....... .......++..|+|||.+.. ..++.++|||||||++|+|++|+.||..................+.+
T Consensus 153 g~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 230 (337)
T cd07858 153 GLARTTSEKG--DFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSE 230 (337)
T ss_pred ccccccCCCc--ccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCh
Confidence 9998654332 12234567889999998764 46899999999999999999999999765332211111111000000
Q ss_pred C-c------cccccc-------CcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q 035862 307 G-K------KFSMMI-------DPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLA 358 (393)
Q Consensus 307 ~-~------~~~~~~-------~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~ 358 (393)
. . ...... ..... .....++.++.+++.+||+.+|++|||+.++++|.|..
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~ 295 (337)
T cd07858 231 EDLGFIRNEKARRYIRSLPYTPRQSFA-RLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLA 295 (337)
T ss_pred HHhhhcCchhhhHHHHhcCcccccCHH-HHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchh
Confidence 0 0 000000 00000 01124567899999999999999999999999997764
No 315
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=9.5e-39 Score=290.57 Aligned_cols=253 Identities=27% Similarity=0.403 Sum_probs=199.4
Q ss_pred CCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCC-cccHHHHHHHHHHhhcCC---CCccceeeeeeecCCc
Q 035862 73 GFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG-LQGHKQWLAEVQFLGVVS---HPNLVKLLGYCSTEDE 148 (393)
Q Consensus 73 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~---h~niv~~~~~~~~~~~ 148 (393)
.|+..+.||.|+||.||+|.+..++ ..+++|.+.... ......+.+|+.+++.++ |||++++++++....
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~-----~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~- 75 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTG-----RVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGP- 75 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCC-----cEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCC-
Confidence 4778889999999999999975433 469999886542 233456778999999986 999999999987655
Q ss_pred ccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeecc
Q 035862 149 RGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFG 228 (393)
Q Consensus 149 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg 228 (393)
..++||||+.+++|.+++.. ..+++..++.++.|++.||.|||+. +++|+||+|+||++++++.++|+|||
T Consensus 76 ---~~~lv~e~~~~~~L~~~~~~---~~l~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~p~ni~i~~~~~~~l~dfg 146 (277)
T cd06917 76 ---RLWIIMEYAEGGSVRTLMKA---GPIAEKYISVIIREVLVALKYIHKV---GVIHRDIKAANILVTNTGNVKLCDFG 146 (277)
T ss_pred ---EEEEEEecCCCCcHHHHHHc---cCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHHEEEcCCCCEEEccCC
Confidence 56999999999999998843 3688999999999999999999998 99999999999999999999999999
Q ss_pred CCccCCCCCCccccccccccCCccCcccccc-CCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcCC
Q 035862 229 LAREGPTGDHTHVSTAVVGTYGYAAPEYIET-GHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADG 307 (393)
Q Consensus 229 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 307 (393)
++........ ......|+..|+|||.+.+ ..++.++|+|||||++|+|++|..||......... ......
T Consensus 147 ~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~---~~~~~~---- 217 (277)
T cd06917 147 VAALLNQNSS--KRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAM---MLIPKS---- 217 (277)
T ss_pred ceeecCCCcc--ccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhh---hccccC----
Confidence 9876544321 2234568899999998865 45789999999999999999999999754322111 000000
Q ss_pred cccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q 035862 308 KKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLA 358 (393)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~ 358 (393)
..+.+.. ...+.++.+++.+||+.||++||++.+++++.|..
T Consensus 218 ------~~~~~~~---~~~~~~~~~~i~~~l~~~p~~R~~~~~il~~~~~~ 259 (277)
T cd06917 218 ------KPPRLED---NGYSKLLREFVAACLDEEPKERLSAEELLKSKWIK 259 (277)
T ss_pred ------CCCCCCc---ccCCHHHHHHHHHHcCCCcccCcCHHHHhhChHhh
Confidence 0001100 01457899999999999999999999999987763
No 316
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=9.5e-39 Score=293.25 Aligned_cols=272 Identities=24% Similarity=0.325 Sum_probs=199.6
Q ss_pred cCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCc--ccHHHHHHHHHHhhcCC-CCccceeeeeeecCCc
Q 035862 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL--QGHKQWLAEVQFLGVVS-HPNLVKLLGYCSTEDE 148 (393)
Q Consensus 72 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~ 148 (393)
++|++.+.||+|+||.||+|.+..+ +..|++|.+..... .....+.+|+.+++.+. ||||+++++++...+.
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~-----~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~ 75 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNT-----GKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEK 75 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCC-----CcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCC
Confidence 4689999999999999999997543 34699998765422 23356778999999996 6999999998876654
Q ss_pred -ccceEEEEEeecCCCChHHHHhhcC---CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCC-CCceE
Q 035862 149 -RGIQRLLVYEYMPNRSLEDRLFSRA---QPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDG-NFKPK 223 (393)
Q Consensus 149 -~~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~-~~~~k 223 (393)
.....++||||+++ +|.+++.... ...+++..++.++.||+.||.|||+. +++||||+|+||+++. ++.+|
T Consensus 76 ~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~~~nil~~~~~~~~k 151 (295)
T cd07837 76 NGKPSLYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKH---GVMHRDLKPQNLLVDKQKGLLK 151 (295)
T ss_pred CCCceEEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEecCCCeEE
Confidence 22246999999975 8988885432 34689999999999999999999998 9999999999999998 89999
Q ss_pred EeeccCCccCCCCCCccccccccccCCccCcccccc-CCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhH-HHHHHh
Q 035862 224 LSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIET-GHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQK-LLEWVK 301 (393)
Q Consensus 224 l~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~-~~~~~~ 301 (393)
|+|||++........ ......+++.|+|||.+.+ ..++.++||||||+++|+|++|..||....+..+.. +.....
T Consensus 152 l~dfg~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~ 229 (295)
T cd07837 152 IADLGLGRAFSIPVK--SYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLG 229 (295)
T ss_pred EeecccceecCCCcc--ccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhC
Confidence 999999875432211 1223456889999998865 467899999999999999999999997654332211 111110
Q ss_pred hcCcCCcccccccC-------cc----cccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 035862 302 QFPADGKKFSMMID-------PR----LRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLK 356 (393)
Q Consensus 302 ~~~~~~~~~~~~~~-------~~----~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~ 356 (393)
.+.. ..+..... +. .........+..+.+||.+||..||.+||++.+++.|.|
T Consensus 230 -~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~~~ 293 (295)
T cd07837 230 -TPTE-QVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTHPY 293 (295)
T ss_pred -CCCh-hhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhcCCC
Confidence 0000 00000000 00 000011235678999999999999999999999998865
No 317
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=4.9e-39 Score=289.00 Aligned_cols=253 Identities=26% Similarity=0.430 Sum_probs=201.3
Q ss_pred CCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCC--cccHHHHHHHHHHhhcCCCCccceeeeeeecCCccc
Q 035862 73 GFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG--LQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERG 150 (393)
Q Consensus 73 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 150 (393)
+|.+.+.||.|+||.||+|.....+ ..+++|.+.... ......+.+|+.+++.++|+||+++++.+...+
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~-----~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~--- 72 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDS-----EHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENG--- 72 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCC-----ceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCC---
Confidence 4788899999999999999975433 358999886532 123456778999999999999999999887665
Q ss_pred ceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCc-eEEeeccC
Q 035862 151 IQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFK-PKLSDFGL 229 (393)
Q Consensus 151 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~-~kl~Dfg~ 229 (393)
..++|+||+.+++|.+++.......+++..+..++.|++.||.|||+. +++|+||||+||++++++. +||+|||.
T Consensus 73 -~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~~~l~d~~~ 148 (257)
T cd08225 73 -RLFIVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDR---KILHRDIKSQNIFLSKNGMVAKLGDFGI 148 (257)
T ss_pred -eEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEcCCCCeEEeccccc
Confidence 569999999999999999665555689999999999999999999998 9999999999999998864 69999999
Q ss_pred CccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcCCcc
Q 035862 230 AREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKK 309 (393)
Q Consensus 230 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 309 (393)
+........ ......|++.|+|||.+.+..++.++|+||||+++|+|++|..||....... .........
T Consensus 149 ~~~~~~~~~--~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~--~~~~~~~~~------ 218 (257)
T cd08225 149 ARQLNDSME--LAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQ--LVLKICQGY------ 218 (257)
T ss_pred chhccCCcc--cccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHH--HHHHHhccc------
Confidence 876543221 2233468889999999988889999999999999999999999997543221 111111100
Q ss_pred cccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 035862 310 FSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLK 356 (393)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~ 356 (393)
. .......+.++.+++.+||..+|++|||+.+++++.|
T Consensus 219 ----~-----~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~~~ 256 (257)
T cd08225 219 ----F-----APISPNFSRDLRSLISQLFKVSPRDRPSITSILKRPF 256 (257)
T ss_pred ----C-----CCCCCCCCHHHHHHHHHHhccChhhCcCHHHHhhCCC
Confidence 0 0011134567999999999999999999999998865
No 318
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=1.3e-38 Score=284.85 Aligned_cols=253 Identities=30% Similarity=0.434 Sum_probs=203.8
Q ss_pred CCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcccHHHHHHHHHHhhcCCCCccceeeeeeecCCcccce
Q 035862 73 GFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQ 152 (393)
Q Consensus 73 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 152 (393)
+|...+.||+|++|.||++.+... +..+++|.+..........+.+|+.+++.++|+|++++++++.... .
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~-----~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~----~ 71 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRT-----GKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKD----E 71 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCC-----CcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC----e
Confidence 477889999999999999997533 3469999987765445677889999999999999999999988775 4
Q ss_pred EEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCCcc
Q 035862 153 RLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLARE 232 (393)
Q Consensus 153 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~ 232 (393)
.++++||+.+++|.+++.... ..+++..+..++.|++.||.+||.. +++||||+|+||++++++.++|+|||.+..
T Consensus 72 ~~l~~e~~~~~~L~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~ 147 (253)
T cd05122 72 LWIVMEFCSGGSLKDLLKSTN-QTLTESQIAYVCKELLKGLEYLHSN---GIIHRDIKAANILLTSDGEVKLIDFGLSAQ 147 (253)
T ss_pred EEEEEecCCCCcHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHhhcC---CEecCCCCHHHEEEccCCeEEEeecccccc
Confidence 599999999999999885433 5689999999999999999999998 999999999999999999999999999876
Q ss_pred CCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcCCccccc
Q 035862 233 GPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKFSM 312 (393)
Q Consensus 233 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (393)
...... .....++..|+|||.+.+..++.++|+||||+++|+|++|..||............. .... ..
T Consensus 148 ~~~~~~---~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~---~~~~-----~~ 216 (253)
T cd05122 148 LSDTKA---RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIA---TNGP-----PG 216 (253)
T ss_pred cccccc---ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHH---hcCC-----CC
Confidence 544321 234568889999999988889999999999999999999999997653322111111 0000 00
Q ss_pred ccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 035862 313 MIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLK 356 (393)
Q Consensus 313 ~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~ 356 (393)
.. ....++..+.+++.+||+.||++|||+.++++|.|
T Consensus 217 ~~-------~~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~~~~ 253 (253)
T cd05122 217 LR-------NPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLKHPF 253 (253)
T ss_pred cC-------cccccCHHHHHHHHHHccCChhhCCCHHHHhcCCC
Confidence 00 01113577999999999999999999999998753
No 319
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=1.3e-38 Score=298.02 Aligned_cols=275 Identities=29% Similarity=0.414 Sum_probs=201.9
Q ss_pred HhcCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCC--CcccHHHHHHHHHHhhcC-CCCccceeeeeeecC
Q 035862 70 ATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNH--GLQGHKQWLAEVQFLGVV-SHPNLVKLLGYCSTE 146 (393)
Q Consensus 70 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~ 146 (393)
..++|++.+.||+|+||.||+|.+..+ +..+++|++... .......+.+|+.+++.+ +||||+++++++...
T Consensus 5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~-----~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~ 79 (337)
T cd07852 5 ILRKYEILQKLGKGAYGIVWKAIDRRT-----KEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAE 79 (337)
T ss_pred hhhHHHHhHhhcCCCCeeEEEEEEcCC-----CeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccC
Confidence 356799999999999999999986533 346999987542 223344567899999999 999999999988765
Q ss_pred CcccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEee
Q 035862 147 DERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSD 226 (393)
Q Consensus 147 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~D 226 (393)
+.. ..++||||+. ++|.+++... .+++..++.++.|++.||.|||+. ||+||||||+||+++.++.+||+|
T Consensus 80 ~~~--~~~lv~e~~~-~~L~~~~~~~---~~~~~~~~~i~~qi~~~L~~LH~~---~i~H~dl~p~nill~~~~~~kl~d 150 (337)
T cd07852 80 NDK--DIYLVFEYME-TDLHAVIRAN---ILEDVHKRYIMYQLLKALKYIHSG---NVIHRDLKPSNILLNSDCRVKLAD 150 (337)
T ss_pred CCc--eEEEEecccc-cCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEee
Confidence 433 5699999996 5999888432 678889999999999999999998 999999999999999999999999
Q ss_pred ccCCccCCCCCCc---cccccccccCCccCcccccc-CCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhh
Q 035862 227 FGLAREGPTGDHT---HVSTAVVGTYGYAAPEYIET-GHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQ 302 (393)
Q Consensus 227 fg~a~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~ 302 (393)
||++......... .......|+..|+|||.+.+ ..++.++||||||+++|+|++|+.||....+............
T Consensus 151 ~g~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~ 230 (337)
T cd07852 151 FGLARSLSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIG 230 (337)
T ss_pred ccchhccccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhC
Confidence 9999765433221 12234568899999998755 5678899999999999999999999976544322111100000
Q ss_pred cCcC-----------CcccccccCccc--ccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q 035862 303 FPAD-----------GKKFSMMIDPRL--RNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLA 358 (393)
Q Consensus 303 ~~~~-----------~~~~~~~~~~~~--~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~ 358 (393)
.+.. ...+........ .......++.++.+++.+||+.||.+|||+.+++++.+..
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~~~~~ 299 (337)
T cd07852 231 PPSAEDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEHPYVA 299 (337)
T ss_pred CCCHHHHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhChhhh
Confidence 0000 000000000000 0011112467899999999999999999999999996554
No 320
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=1.3e-38 Score=290.68 Aligned_cols=268 Identities=26% Similarity=0.383 Sum_probs=200.1
Q ss_pred CCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCc-ccHHHHHHHHHHhhcCCCCccceeeeeeecCCcccc
Q 035862 73 GFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL-QGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGI 151 (393)
Q Consensus 73 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 151 (393)
+|++.+.||.|++|.||+|.+..+ +..|++|.+..... .....+.+|+.+++.++||||+++++++...+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~-----~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~---- 71 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTT-----GEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTEN---- 71 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCC-----CeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCC----
Confidence 488899999999999999996533 34699999875432 23456678999999999999999999998776
Q ss_pred eEEEEEeecCCCChHHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCC
Q 035862 152 QRLLVYEYMPNRSLEDRLFSRA-QPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLA 230 (393)
Q Consensus 152 ~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a 230 (393)
..++||||+.+ +|.+++.... ...+++..+..++.|++.||.|||+. +++||||||+||++++++.++|+|||++
T Consensus 72 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~h~dl~p~ni~~~~~~~~~l~d~g~~ 147 (284)
T cd07836 72 KLMLVFEYMDK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHEN---RVLHRDLKPQNLLINKRGELKLADFGLA 147 (284)
T ss_pred cEEEEEecCCc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCcEEEeecchh
Confidence 45999999975 8888875433 34689999999999999999999998 9999999999999999999999999998
Q ss_pred ccCCCCCCccccccccccCCccCcccccc-CCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhH-HHHHHh-------
Q 035862 231 REGPTGDHTHVSTAVVGTYGYAAPEYIET-GHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQK-LLEWVK------- 301 (393)
Q Consensus 231 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~-~~~~~~------- 301 (393)
........ ......++..|++||++.+ ..++.++|||||||++|+|++|..||.......... ......
T Consensus 148 ~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (284)
T cd07836 148 RAFGIPVN--TFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTW 225 (284)
T ss_pred hhhcCCcc--ccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhH
Confidence 75433211 1233467889999998865 457889999999999999999999997654322111 111100
Q ss_pred ----hcCcCCcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 035862 302 ----QFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLK 356 (393)
Q Consensus 302 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~ 356 (393)
..+.....+....... ........+..+.+++.+||+.||.+||++.+++++.|
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~ 283 (284)
T cd07836 226 PGISQLPEYKPTFPRYPPQD-LQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQHPW 283 (284)
T ss_pred HHHhcCchhcccccCCChHH-HHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcCCC
Confidence 0000000000000000 01111234678899999999999999999999998754
No 321
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=1.4e-38 Score=290.04 Aligned_cols=266 Identities=27% Similarity=0.340 Sum_probs=194.7
Q ss_pred CcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCC-cccHHHHHHHHHHhhcCC-CCccceeeeeeecCCcccc
Q 035862 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG-LQGHKQWLAEVQFLGVVS-HPNLVKLLGYCSTEDERGI 151 (393)
Q Consensus 74 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~ 151 (393)
|++.+.||+|+||.||+|....+ +..|++|.+.... ........+|+.++..+. |+|++++++++.+....
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~-----~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~-- 73 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKT-----GKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTG-- 73 (282)
T ss_pred CceEeeccccccceEEEEEEcCC-----CcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCC--
Confidence 67788999999999999986533 3469999887542 222234457888888886 99999999999876322
Q ss_pred eEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCCc
Q 035862 152 QRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAR 231 (393)
Q Consensus 152 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~ 231 (393)
.+++||||+. ++|.+++.... ..+++..++.++.|++.||.|||+. +++||||+|+||+++. +.+||+|||++.
T Consensus 74 ~~~lv~e~~~-~~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~p~ni~l~~-~~~kl~dfg~~~ 147 (282)
T cd07831 74 RLALVFELMD-MNLYELIKGRK-RPLPEKRVKSYMYQLLKSLDHMHRN---GIFHRDIKPENILIKD-DILKLADFGSCR 147 (282)
T ss_pred cEEEEEecCC-ccHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEcC-CCeEEEeccccc
Confidence 5699999996 58888875433 4689999999999999999999998 9999999999999999 999999999997
Q ss_pred cCCCCCCccccccccccCCccCccccc-cCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHH-HHH--------h
Q 035862 232 EGPTGDHTHVSTAVVGTYGYAAPEYIE-TGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLL-EWV--------K 301 (393)
Q Consensus 232 ~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~-~~~--------~ 301 (393)
....... .....++..|+|||.+. +..++.++|||||||++|||++|..||............ ... .
T Consensus 148 ~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (282)
T cd07831 148 GIYSKPP---YTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLK 224 (282)
T ss_pred ccccCCC---cCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHH
Confidence 6533221 12346788999999764 456788999999999999999999999765432211111 100 0
Q ss_pred hcCcCCc---ccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 035862 302 QFPADGK---KFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLK 356 (393)
Q Consensus 302 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~ 356 (393)
....... .+.......+ ......++..+.+++.+||+++|++||++.+++++.|
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~~~ 281 (282)
T cd07831 225 KFRKSRHMNYNFPSKKGTGL-RKLLPNASAEGLDLLKKLLAYDPDERITAKQALRHPY 281 (282)
T ss_pred hhcccccccccCcccccccH-HHHcccccHHHHHHHHHHhccCcccccCHHHHhhCCC
Confidence 0000000 0000000000 0011245788999999999999999999999998864
No 322
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=1.7e-38 Score=296.06 Aligned_cols=269 Identities=23% Similarity=0.307 Sum_probs=197.2
Q ss_pred eeccc--CCceEEEEEEcCCCCCCCceEEEEEEecCCC--cccHHHHHHHHHHhhcCCCCccceeeeeeecCCcccceEE
Q 035862 79 KIGEG--GFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG--LQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQRL 154 (393)
Q Consensus 79 ~lg~G--~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 154 (393)
.||.| +||+||++.+...+ ..||+|.+.... ....+.+.+|+.+++.++||||+++++++...+ ..+
T Consensus 5 ~ig~g~~~~~~v~~a~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~----~~~ 75 (328)
T cd08226 5 EIGRGFCNLTSVYLARHTPTG-----TLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGS----WLW 75 (328)
T ss_pred HhCCcccCceeEEEEEEcCCC-----cEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCC----ceE
Confidence 46666 89999999865443 469999987542 223456788999999999999999999998776 459
Q ss_pred EEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCCccCC
Q 035862 155 LVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGP 234 (393)
Q Consensus 155 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~ 234 (393)
+||||+.+++|.+++.......+++..+..++.|++.||+|||+. +++||||||+||+++.++.++++||+.+....
T Consensus 76 ~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~ 152 (328)
T cd08226 76 VISPFMAYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQN---GYIHRNIKASHILISGDGLVSLSGLSHLYSLV 152 (328)
T ss_pred EEEecccCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEeCCCcEEEechHHHhhhh
Confidence 999999999999998765555689999999999999999999998 99999999999999999999999998654321
Q ss_pred CCCCcc-----ccccccccCCccCccccccC--CCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcCC
Q 035862 235 TGDHTH-----VSTAVVGTYGYAAPEYIETG--HLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADG 307 (393)
Q Consensus 235 ~~~~~~-----~~~~~~gt~~y~aPE~~~~~--~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 307 (393)
...... ......++..|+|||++.+. .++.++|||||||++|+|++|..||........ ........+...
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~--~~~~~~~~~~~~ 230 (328)
T cd08226 153 RNGQKAKVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQM--LLQKLKGPPYSP 230 (328)
T ss_pred ccCccccccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHH--HHHHhcCCCCCC
Confidence 111100 01112345679999998763 478999999999999999999999976543211 111111000000
Q ss_pred c--------------------------c-----cccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 035862 308 K--------------------------K-----FSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLK 356 (393)
Q Consensus 308 ~--------------------------~-----~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~ 356 (393)
. . ........+.......++..+.+|+.+||+.||++|||+.++++|.|
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~ 310 (328)
T cd08226 231 LDITTFPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAF 310 (328)
T ss_pred ccccccchhhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHH
Confidence 0 0 00011111222223456788999999999999999999999999988
Q ss_pred HHHhh
Q 035862 357 LAVQE 361 (393)
Q Consensus 357 ~~~~~ 361 (393)
.....
T Consensus 311 ~~~~~ 315 (328)
T cd08226 311 FKQVK 315 (328)
T ss_pred HHHHH
Confidence 65443
No 323
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4.9e-40 Score=290.13 Aligned_cols=270 Identities=23% Similarity=0.311 Sum_probs=208.9
Q ss_pred hcCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcccHHHHHHHHHHhhcCC--CCc----cceeeeeee
Q 035862 71 TNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVS--HPN----LVKLLGYCS 144 (393)
Q Consensus 71 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~--h~n----iv~~~~~~~ 144 (393)
.++|.+..++|+|+||.|-.++++.. +..||+|+++.-. ...+..+-|+.+|.+++ .|+ ++++.+||.
T Consensus 88 ~~Ry~i~~~lGeGtFGkV~ec~D~~~-----~~~vAlKIik~V~-kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFd 161 (415)
T KOG0671|consen 88 TNRYEIVDLLGEGTFGKVVECWDRET-----KEHVALKIIKNVD-KYREAALIEIEVLQKINESDPNGKFRCVQMRDWFD 161 (415)
T ss_pred ccceehhhhhcCCcccceEEEeecCC-----CceehHHHHHHHH-HHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhh
Confidence 78999999999999999999997654 4569999987643 33455667999999985 232 677778887
Q ss_pred cCCcccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCC------
Q 035862 145 TEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDG------ 218 (393)
Q Consensus 145 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~------ 218 (393)
..+ +.|+|+|.+ |-++.+++..+...+++...++.+++||+++++|||+. +++|.||||+|||+.+
T Consensus 162 yrg----hiCivfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~---kl~HTDLKPENILfvss~~~~~ 233 (415)
T KOG0671|consen 162 YRG----HICIVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDL---KLTHTDLKPENILFVSSEYFKT 233 (415)
T ss_pred ccC----ceEEEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhc---ceeecCCChheEEEeccceEEE
Confidence 666 569999999 77999999888888899999999999999999999999 9999999999999932
Q ss_pred --------------CCceEEeeccCCccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCc
Q 035862 219 --------------NFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRV 284 (393)
Q Consensus 219 --------------~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~p 284 (393)
+..|+|+|||.|....... +..+.|..|.|||++.+..|+..+||||+||||+|+.||...
T Consensus 234 ~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~h-----s~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~L 308 (415)
T KOG0671|consen 234 YNPKKKVCFIRPLKSTAIKVIDFGSATFDHEHH-----STIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETL 308 (415)
T ss_pred eccCCccceeccCCCcceEEEecCCcceeccCc-----ceeeeccccCCchheeccCcCCccCceeeeeEEEEeecccee
Confidence 3358999999998744322 567889999999999999999999999999999999999999
Q ss_pred cCCCCchhhhHHHHHHhh-cCcCC------------cccc-----------cccCc--cc--ccccCHHHHHHHHHHHHH
Q 035862 285 LERNRPTMEQKLLEWVKQ-FPADG------------KKFS-----------MMIDP--RL--RNQYSINAARRVAKLADN 336 (393)
Q Consensus 285 f~~~~~~~~~~~~~~~~~-~~~~~------------~~~~-----------~~~~~--~~--~~~~~~~~~~~l~~li~~ 336 (393)
|..++...+-.+.+...+ +|... ..++ ...+. .+ ..........+|.+|+++
T Consensus 309 FqtHen~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~ 388 (415)
T KOG0671|consen 309 FQTHENLEHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRR 388 (415)
T ss_pred cccCCcHHHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHH
Confidence 988875554433332221 11110 0000 00000 00 001112344679999999
Q ss_pred hcccCCCCCCCHHHHHHHHHHHH
Q 035862 337 CLKKNPEERPTMNQVVESLKLAV 359 (393)
Q Consensus 337 ~l~~dp~~Rps~~~~l~~l~~~~ 359 (393)
||..||.+|+|+.|++.|.+...
T Consensus 389 mL~fDP~~RiTl~EAL~HpFF~~ 411 (415)
T KOG0671|consen 389 MLEFDPARRITLREALSHPFFAR 411 (415)
T ss_pred HHccCccccccHHHHhcCHHhhc
Confidence 99999999999999999987643
No 324
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=1.5e-38 Score=285.67 Aligned_cols=257 Identities=27% Similarity=0.396 Sum_probs=205.7
Q ss_pred CCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCc--ccHHHHHHHHHHhhcCCCCccceeeeeeecCCccc
Q 035862 73 GFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL--QGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERG 150 (393)
Q Consensus 73 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 150 (393)
+|...+.||+|++|.||+|....+ +..+++|.+..... .....+.+|+.+++.++||||+++++.+......
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~-----~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~- 74 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDT-----GELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKN- 74 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCC-----CcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCC-
Confidence 477889999999999999987543 34699998876542 3456788999999999999999999998876211
Q ss_pred ceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCC
Q 035862 151 IQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLA 230 (393)
Q Consensus 151 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a 230 (393)
..++++||+.+++|.+++.... .+++..++.++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||.+
T Consensus 75 -~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lh~~---~~~h~dl~p~ni~i~~~~~~~l~d~~~~ 148 (260)
T cd06606 75 -TLNIFLEYVSGGSLSSLLKKFG--KLPEPVIRKYTRQILEGLAYLHSN---GIVHRDIKGANILVDSDGVVKLADFGCA 148 (260)
T ss_pred -eEEEEEEecCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEcccccE
Confidence 5699999999999999985443 789999999999999999999998 9999999999999999999999999998
Q ss_pred ccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcCCccc
Q 035862 231 REGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKF 310 (393)
Q Consensus 231 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (393)
................++..|+|||.+.+..++.++||||||+++|+|++|..||......... .....
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~-~~~~~---------- 217 (260)
T cd06606 149 KRLGDIETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMAA-LYKIG---------- 217 (260)
T ss_pred EecccccccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHH-HHhcc----------
Confidence 8755443211123457888999999998888999999999999999999999999766521111 11100
Q ss_pred ccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 035862 311 SMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLK 356 (393)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~ 356 (393)
........+...+..+.+|+.+||..+|++||++.++++|.|
T Consensus 218 ----~~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~~~~ 259 (260)
T cd06606 218 ----SSGEPPEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQHPF 259 (260)
T ss_pred ----ccCCCcCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhhCCC
Confidence 001111223344688999999999999999999999999865
No 325
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=1.5e-38 Score=293.96 Aligned_cols=276 Identities=23% Similarity=0.358 Sum_probs=199.9
Q ss_pred hcCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCC--cccHHHHHHHHHHhhcCCCCccceeeeeeecCCc
Q 035862 71 TNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG--LQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDE 148 (393)
Q Consensus 71 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 148 (393)
.++|++.+.||+|+||.||+|.... .+..||+|.+.... ......+.+|+.+++.++||||+++++++.....
T Consensus 11 ~~~y~~~~~lg~g~~~~v~~~~~~~-----~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 85 (310)
T cd07865 11 VSKYEKLAKIGQGTFGEVFKARHKK-----TKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKAT 85 (310)
T ss_pred hhheEEEEEeecCCCEEEEEEEECC-----CCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccc
Confidence 4579999999999999999998654 34569999886432 1223345689999999999999999998876542
Q ss_pred c----cceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEE
Q 035862 149 R----GIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKL 224 (393)
Q Consensus 149 ~----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl 224 (393)
. ....++||||+. ++|.+++... ...+++..++.++.|++.||.|||++ +++|+||||+||+++.++.+||
T Consensus 86 ~~~~~~~~~~lv~e~~~-~~l~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl 160 (310)
T cd07865 86 PYNRYKGSFYLVFEFCE-HDLAGLLSNK-NVKFTLSEIKKVMKMLLNGLYYIHRN---KILHRDMKAANILITKDGILKL 160 (310)
T ss_pred cccCCCceEEEEEcCCC-cCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEECCCCcEEE
Confidence 1 235699999995 5888877433 24689999999999999999999998 9999999999999999999999
Q ss_pred eeccCCccCCCCCCc--cccccccccCCccCccccccC-CCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHh
Q 035862 225 SDFGLAREGPTGDHT--HVSTAVVGTYGYAAPEYIETG-HLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVK 301 (393)
Q Consensus 225 ~Dfg~a~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~ 301 (393)
+|||++......... .......++..|+|||.+.+. .++.++||||||+++|+|++|..||................
T Consensus 161 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~ 240 (310)
T cd07865 161 ADFGLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLC 240 (310)
T ss_pred CcCCCcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHh
Confidence 999999765332211 112234678899999988664 47889999999999999999999997665433322222211
Q ss_pred h-cCcCC----ccccc---c-cCccccccc-----CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 035862 302 Q-FPADG----KKFSM---M-IDPRLRNQY-----SINAARRVAKLADNCLKKNPEERPTMNQVVESLK 356 (393)
Q Consensus 302 ~-~~~~~----~~~~~---~-~~~~~~~~~-----~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~ 356 (393)
. .+... ..... . ......... ....+..+.+||.+||..||.+|||+.++++|.|
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h~~ 309 (310)
T cd07865 241 GSITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNHDF 309 (310)
T ss_pred CCCChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcCCC
Confidence 1 11000 00000 0 000000000 0012356789999999999999999999998865
No 326
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=1e-38 Score=290.70 Aligned_cols=247 Identities=25% Similarity=0.347 Sum_probs=189.0
Q ss_pred eecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcc---cHHHHHHHHHHhh---cCCCCccceeeeeeecCCcccce
Q 035862 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQ---GHKQWLAEVQFLG---VVSHPNLVKLLGYCSTEDERGIQ 152 (393)
Q Consensus 79 ~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~---~l~h~niv~~~~~~~~~~~~~~~ 152 (393)
.||+|+||.||++.+..+ +..+|+|.+...... ....+.+|..+++ ..+||||+.+++.+...+ .
T Consensus 1 ~lg~G~~g~Vy~~~~~~~-----~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~----~ 71 (279)
T cd05633 1 IIGRGGFGEVYGCRKADT-----GKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPD----K 71 (279)
T ss_pred CcccCCCeEEEEEEECCC-----CcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCC----e
Confidence 489999999999986533 346999988654221 1222344444333 347999999999988766 4
Q ss_pred EEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCCcc
Q 035862 153 RLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLARE 232 (393)
Q Consensus 153 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~ 232 (393)
.++||||+.+++|.+++.. ...+++..+..++.|++.||.|||+. +++||||||+|||+++++.++|+|||++..
T Consensus 72 ~~lv~e~~~~~~L~~~i~~--~~~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dikp~Nil~~~~~~~~l~dfg~~~~ 146 (279)
T cd05633 72 LCFILDLMNGGDLHYHLSQ--HGVFSEKEMRFYATEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACD 146 (279)
T ss_pred EEEEEecCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC---CcCCCCCCHHHEEECCCCCEEEccCCccee
Confidence 5999999999999998843 35689999999999999999999998 999999999999999999999999999865
Q ss_pred CCCCCCccccccccccCCccCccccc-cCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcCCcccc
Q 035862 233 GPTGDHTHVSTAVVGTYGYAAPEYIE-TGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKFS 311 (393)
Q Consensus 233 ~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (393)
..... .....|+..|+|||.+. +..++.++||||+||++|+|++|..||.................
T Consensus 147 ~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~--------- 213 (279)
T cd05633 147 FSKKK----PHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLT--------- 213 (279)
T ss_pred ccccC----ccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHHHHHhhc---------
Confidence 43221 12346899999999886 45689999999999999999999999975433221111111100
Q ss_pred cccCcccccccCHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHHHHHH
Q 035862 312 MMIDPRLRNQYSINAARRVAKLADNCLKKNPEERP-----TMNQVVESLKLA 358 (393)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rp-----s~~~~l~~l~~~ 358 (393)
.....+..++.++.+++.+||+.||.+|| +++++++|.+..
T Consensus 214 ------~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h~~~~ 259 (279)
T cd05633 214 ------VNVELPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEHVFFK 259 (279)
T ss_pred ------CCcCCccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhCcccc
Confidence 01112234567899999999999999999 699999997663
No 327
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=2.1e-38 Score=292.68 Aligned_cols=252 Identities=30% Similarity=0.413 Sum_probs=198.4
Q ss_pred cCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCc---ccHHHHHHHHHHhhcCCCCccceeeeeeecCCc
Q 035862 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL---QGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDE 148 (393)
Q Consensus 72 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 148 (393)
..|+..+.||+|+||.||+|..... +..|++|.+..... .....+.+|+.+++.++||||+++++++...+
T Consensus 15 ~~y~~~~~lg~g~~g~vy~~~~~~~-----~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~- 88 (307)
T cd06607 15 KLFTDLREIGHGSFGAVYFARDVRT-----NEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREH- 88 (307)
T ss_pred hhhhhheeecCCCCeEEEEEEEcCC-----CcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCC-
Confidence 4588999999999999999986533 34699998864322 23346788999999999999999999998766
Q ss_pred ccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeecc
Q 035862 149 RGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFG 228 (393)
Q Consensus 149 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg 228 (393)
..++||||+. ++|.+++... ...+++..+..++.|++.||.|||+. +++|+||+|+||++++++.++|+|||
T Consensus 89 ---~~~lv~e~~~-g~l~~~~~~~-~~~l~~~~~~~~~~ql~~~L~~LH~~---~i~H~dl~p~nIl~~~~~~~kL~dfg 160 (307)
T cd06607 89 ---TAWLVMEYCL-GSASDILEVH-KKPLQEVEIAAICHGALQGLAYLHSH---ERIHRDIKAGNILLTEPGTVKLADFG 160 (307)
T ss_pred ---eEEEEHHhhC-CCHHHHHHHc-ccCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEECCCCCEEEeecC
Confidence 4599999996 5777776433 34589999999999999999999998 99999999999999999999999999
Q ss_pred CCccCCCCCCccccccccccCCccCccccc---cCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCc
Q 035862 229 LAREGPTGDHTHVSTAVVGTYGYAAPEYIE---TGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPA 305 (393)
Q Consensus 229 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~ 305 (393)
++...... ....++..|+|||++. ...++.++||||||+++|+|++|..||............ ...
T Consensus 161 ~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~~--~~~--- 229 (307)
T cd06607 161 SASLVSPA------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHI--AQN--- 229 (307)
T ss_pred cceecCCC------CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHHHH--hcC---
Confidence 98754322 2346788999999874 456889999999999999999999999754332211100 000
Q ss_pred CCcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHH
Q 035862 306 DGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAV 359 (393)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~~ 359 (393)
. ........++..+.+++.+||+.+|++||++.+++.+.|...
T Consensus 230 -~----------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~ 272 (307)
T cd06607 230 -D----------SPTLSSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKHRFVLR 272 (307)
T ss_pred -C----------CCCCCchhhCHHHHHHHHHHhcCChhhCcCHHHHhcChhhcc
Confidence 0 000111235678999999999999999999999999987654
No 328
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=1.5e-38 Score=291.37 Aligned_cols=254 Identities=26% Similarity=0.392 Sum_probs=201.2
Q ss_pred ccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcccHHHHHHHHHHhhcCCCCccceeeeeeecCCcccceEEE
Q 035862 76 RMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLL 155 (393)
Q Consensus 76 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~l 155 (393)
...+||+|+||.||++....+ +..|++|.+..........+.+|+.+++.++|+||+++++.+...+ ..++
T Consensus 24 ~~~~lg~g~~g~v~~~~~~~~-----~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~----~~~l 94 (292)
T cd06657 24 NFIKIGEGSTGIVCIATVKSS-----GKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGD----ELWV 94 (292)
T ss_pred hHHHcCCCCCeEEEEEEEcCC-----CeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCC----EEEE
Confidence 345799999999999986533 3469999886554445566888999999999999999999998776 5699
Q ss_pred EEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCCccCCC
Q 035862 156 VYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPT 235 (393)
Q Consensus 156 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~ 235 (393)
||||+++++|.+++.. ..+++..++.++.|++.||+|||+. |++||||+|+||+++.++.++|+|||++.....
T Consensus 95 v~e~~~~~~L~~~~~~---~~~~~~~~~~~~~ql~~~l~~lH~~---givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~ 168 (292)
T cd06657 95 VMEFLEGGALTDIVTH---TRMNEEQIAAVCLAVLKALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK 168 (292)
T ss_pred EEecCCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEcccccceeccc
Confidence 9999999999997732 3578999999999999999999998 999999999999999999999999998865433
Q ss_pred CCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcCCcccccccC
Q 035862 236 GDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKFSMMID 315 (393)
Q Consensus 236 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (393)
... ......|+..|+|||.+.+..++.++|+||+|+++|+|++|..||............. ...+.
T Consensus 169 ~~~--~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~~~--~~~~~---------- 234 (292)
T cd06657 169 EVP--RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIR--DNLPP---------- 234 (292)
T ss_pred ccc--cccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH--hhCCc----------
Confidence 221 1233568899999999988888999999999999999999999997543322111111 11110
Q ss_pred cccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhh
Q 035862 316 PRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQE 361 (393)
Q Consensus 316 ~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~~~~ 361 (393)
... ....++..+.+++.+||+.+|.+||++.+++.|.+.....
T Consensus 235 -~~~--~~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~~~~~~~~~ 277 (292)
T cd06657 235 -KLK--NLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAG 277 (292)
T ss_pred -ccC--CcccCCHHHHHHHHHHHhCCcccCcCHHHHhcChHHhccC
Confidence 000 0112456788999999999999999999999998877654
No 329
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=1e-38 Score=288.30 Aligned_cols=255 Identities=22% Similarity=0.295 Sum_probs=199.4
Q ss_pred cCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCC-----CcccHHHHHHHHHHhhcCCCCccceeeeeeecC
Q 035862 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNH-----GLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTE 146 (393)
Q Consensus 72 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 146 (393)
.+|++.+.||+|+||.||+|.+..+ +..|++|.+... .......+.+|+.+++.++|+||+++++++...
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~-----~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~ 76 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADT-----GRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDP 76 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCC-----CCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcC
Confidence 3688999999999999999986533 346999987532 122345678899999999999999999988665
Q ss_pred CcccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEee
Q 035862 147 DERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSD 226 (393)
Q Consensus 147 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~D 226 (393)
... ..+++|||+.+++|.+++.. ...+++..++.++.|++.||.|||+. +++|+||||+||+++.++.++|+|
T Consensus 77 ~~~--~~~~v~e~~~~~~L~~~~~~--~~~l~~~~~~~~~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~d 149 (264)
T cd06653 77 EEK--KLSIFVEYMPGGSIKDQLKA--YGALTENVTRRYTRQILQGVSYLHSN---MIVHRDIKGANILRDSAGNVKLGD 149 (264)
T ss_pred CCC--EEEEEEEeCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECc
Confidence 433 56899999999999998853 34578899999999999999999998 999999999999999999999999
Q ss_pred ccCCccCCCCCCc-cccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCc
Q 035862 227 FGLAREGPTGDHT-HVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPA 305 (393)
Q Consensus 227 fg~a~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~ 305 (393)
||++......... .......++..|+|||++.+..++.++|+|||||++|+|++|..||....... ....... .
T Consensus 150 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--~~~~~~~-~-- 224 (264)
T cd06653 150 FGASKRIQTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMA--AIFKIAT-Q-- 224 (264)
T ss_pred cccccccccccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHHH--HHHHHHc-C--
Confidence 9999764321111 11123568899999999988889999999999999999999999997543221 1111110 0
Q ss_pred CCcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 035862 306 DGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESL 355 (393)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l 355 (393)
......+..+++.+.+++.+||. +|..||++.+++.|+
T Consensus 225 -----------~~~~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~~~ 262 (264)
T cd06653 225 -----------PTKPMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLRHP 262 (264)
T ss_pred -----------CCCCCCCcccCHHHHHHHHHHhc-CcccCccHHHHhcCC
Confidence 01112233566889999999998 579999999998875
No 330
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00 E-value=1.4e-38 Score=296.96 Aligned_cols=279 Identities=26% Similarity=0.339 Sum_probs=207.5
Q ss_pred CCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCC--cccHHHHHHHHHHhhcCCCCccceeeeeeecCC-cc
Q 035862 73 GFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG--LQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTED-ER 149 (393)
Q Consensus 73 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-~~ 149 (393)
+|++.+.||.|++|.||+|..... +..|++|.+.... ....+.+.+|+.+++.++||||+++++++...+ ..
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~-----~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 75 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRT-----GRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPED 75 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCC-----CcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCccc
Confidence 588899999999999999996533 3469999887643 334567889999999999999999999987765 12
Q ss_pred cceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccC
Q 035862 150 GIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGL 229 (393)
Q Consensus 150 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~ 229 (393)
...+|++|||+. ++|.+++.. ...+++..++.++.|++.||.|||+. |++||||||+|||++.++.++|+|||+
T Consensus 76 ~~~~~lv~e~~~-~~l~~~l~~--~~~l~~~~~~~i~~~l~~~l~~LH~~---gi~H~dlkp~nili~~~~~~~L~dfg~ 149 (330)
T cd07834 76 FNDVYIVTELME-TDLHKVIKS--PQPLTDDHIQYFLYQILRGLKYLHSA---NVIHRDLKPSNILVNSNCDLKICDFGL 149 (330)
T ss_pred ccceEEEecchh-hhHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccCc
Confidence 225699999996 589888843 34789999999999999999999998 999999999999999999999999999
Q ss_pred CccCCCCCCc-cccccccccCCccCccccccC-CCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHH-HHHHhhcCcC
Q 035862 230 AREGPTGDHT-HVSTAVVGTYGYAAPEYIETG-HLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKL-LEWVKQFPAD 306 (393)
Q Consensus 230 a~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~-~~~~~~~~~~ 306 (393)
+......... .......++..|+|||.+.+. .++.++|+||||+++|+|++|.+||........... .......+..
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~ 229 (330)
T cd07834 150 ARGVDPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEE 229 (330)
T ss_pred eEeecccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChh
Confidence 9865443210 112345678899999999887 889999999999999999999999976654322111 1111000000
Q ss_pred C------cccccccC---c---ccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhh
Q 035862 307 G------KKFSMMID---P---RLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQES 362 (393)
Q Consensus 307 ~------~~~~~~~~---~---~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~~~~~ 362 (393)
. ......+. . .-........+..+.+|+.+||+.+|.+||++.+++.|.|......
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~~ 297 (330)
T cd07834 230 DLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLHD 297 (330)
T ss_pred HhhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhcc
Confidence 0 00000000 0 0000011125678999999999999999999999999987754333
No 331
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=5.9e-38 Score=290.98 Aligned_cols=256 Identities=30% Similarity=0.427 Sum_probs=200.4
Q ss_pred CCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCc---ccHHHHHHHHHHhhcCCCCccceeeeeeecCCcc
Q 035862 73 GFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL---QGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDER 149 (393)
Q Consensus 73 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 149 (393)
.|...+.||+|+||.||+|++... +..+++|.+..... .....+.+|+.+++.++|||++++++++...+
T Consensus 26 ~f~~~~~lg~G~~~~v~~~~~~~~-----~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~-- 98 (317)
T cd06635 26 LFTDLREIGHGSFGAVYFARDVRT-----NEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREH-- 98 (317)
T ss_pred hhhhhheeccCCCeEEEEEEEcCC-----CcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCC--
Confidence 377788999999999999986543 34699998865422 23346788999999999999999999998766
Q ss_pred cceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccC
Q 035862 150 GIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGL 229 (393)
Q Consensus 150 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~ 229 (393)
..++||||+.+ +|.+.+... ...+++..+..++.|++.||.|||+. +++||||+|+||+++.++.++|+|||+
T Consensus 99 --~~~lv~e~~~g-~l~~~~~~~-~~~l~~~~~~~i~~~i~~~l~~lH~~---~i~H~dL~p~Nil~~~~~~~kl~dfg~ 171 (317)
T cd06635 99 --TAWLVMEYCLG-SASDLLEVH-KKPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADFGS 171 (317)
T ss_pred --eEEEEEeCCCC-CHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcccEEECCCCCEEEecCCC
Confidence 45999999965 787776433 34589999999999999999999998 999999999999999999999999998
Q ss_pred CccCCCCCCccccccccccCCccCccccc---cCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcC
Q 035862 230 AREGPTGDHTHVSTAVVGTYGYAAPEYIE---TGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPAD 306 (393)
Q Consensus 230 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~ 306 (393)
+...... ....|+..|+|||.+. ...++.++|||||||++|+|++|..||......... .......
T Consensus 172 ~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~--~~~~~~~--- 240 (317)
T cd06635 172 ASIASPA------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSAL--YHIAQNE--- 240 (317)
T ss_pred ccccCCc------ccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHH--HHHHhcc---
Confidence 8654321 2346888999999874 456889999999999999999999998754322111 1111100
Q ss_pred CcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhhcC
Q 035862 307 GKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQESEQ 364 (393)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~~~~~~~ 364 (393)
.........+..+.+++.+||+.+|.+||++.+++++++......+.
T Consensus 241 -----------~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~~~~ 287 (317)
T cd06635 241 -----------SPTLQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVLRERPET 287 (317)
T ss_pred -----------CCCCCCccccHHHHHHHHHHccCCcccCcCHHHHHhChhhhccCccc
Confidence 00011123457789999999999999999999999999987655444
No 332
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=2.4e-38 Score=284.29 Aligned_cols=253 Identities=27% Similarity=0.430 Sum_probs=204.9
Q ss_pred CCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCc--ccHHHHHHHHHHhhcCCCCccceeeeeeecCCccc
Q 035862 73 GFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL--QGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERG 150 (393)
Q Consensus 73 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 150 (393)
+|.+.+.||.|+||.||++.+..+ +..+++|.+..... .....+.+|+++++.++|||++++++.+...+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~-----~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~--- 72 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSD-----GKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKG--- 72 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCC-----CcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCC---
Confidence 488889999999999999997543 34699999876533 44566888999999999999999999987764
Q ss_pred ceEEEEEeecCCCChHHHHhhcC--CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeecc
Q 035862 151 IQRLLVYEYMPNRSLEDRLFSRA--QPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFG 228 (393)
Q Consensus 151 ~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg 228 (393)
..++|+||+++++|.+++.... ...+++..+..++.|++.||.+||+. |++|+||+|+||++++++.++|+|||
T Consensus 73 -~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~---~~~H~dl~~~nil~~~~~~~~l~d~~ 148 (258)
T cd08215 73 -KLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSR---KILHRDIKPQNIFLTSNGLVKLGDFG 148 (258)
T ss_pred -EEEEEEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHHeEEcCCCcEEECCcc
Confidence 5699999999999999986543 46789999999999999999999998 99999999999999999999999999
Q ss_pred CCccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcCCc
Q 035862 229 LAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGK 308 (393)
Q Consensus 229 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 308 (393)
.+....... .......|++.|+|||.+.+..++.++|+||+|+++|+|++|..||....... .........
T Consensus 149 ~~~~~~~~~--~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~--~~~~~~~~~----- 219 (258)
T cd08215 149 ISKVLSSTV--DLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLE--LALKILKGQ----- 219 (258)
T ss_pred ceeecccCc--ceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHHH--HHHHHhcCC-----
Confidence 997654432 12334578899999999988889999999999999999999999997554221 111111100
Q ss_pred ccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 035862 309 KFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLK 356 (393)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~ 356 (393)
....+...+..+.+++.+||..+|++||++.+++++.+
T Consensus 220 ----------~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~ 257 (258)
T cd08215 220 ----------YPPIPSQYSSELRNLVSSLLQKDPEERPSIAQILQSPF 257 (258)
T ss_pred ----------CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHhcCCC
Confidence 01112234578999999999999999999999998754
No 333
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=100.00 E-value=3.1e-38 Score=294.79 Aligned_cols=277 Identities=24% Similarity=0.301 Sum_probs=199.7
Q ss_pred CCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCC--cccHHHHHHHHHHhhcCC-CCccceeeeeeecCCcc
Q 035862 73 GFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG--LQGHKQWLAEVQFLGVVS-HPNLVKLLGYCSTEDER 149 (393)
Q Consensus 73 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~ 149 (393)
+|.+.+.||+|+||.||++.+... ..+..||+|.+.... ......+.+|+.+++.+. ||||+++++.+......
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~---~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~ 77 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAET---SEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGN 77 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCC---CcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeecccc
Confidence 478889999999999999997543 124569999886532 122456778999999984 99999999876543222
Q ss_pred cceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccC
Q 035862 150 GIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGL 229 (393)
Q Consensus 150 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~ 229 (393)
....+++++|+. ++|.+++. ....+++..++.++.||+.||.|||+. |++||||||+|||+++++.+||+|||+
T Consensus 78 ~~~~~~~~e~~~-~~L~~~l~--~~~~~~~~~~~~~~~qi~~aL~~LH~~---givH~dlkp~Nili~~~~~~kl~Dfg~ 151 (332)
T cd07857 78 FNELYLYEELME-ADLHQIIR--SGQPLTDAHFQSFIYQILCGLKYIHSA---NVLHRDLKPGNLLVNADCELKICDFGL 151 (332)
T ss_pred CCcEEEEEeccc-CCHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHeEEcCCCCEEeCcCCC
Confidence 235688899985 69999884 345689999999999999999999998 999999999999999999999999999
Q ss_pred CccCCCCCCc--cccccccccCCccCcccccc-CCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhh-HHHHHHhhcCc
Q 035862 230 AREGPTGDHT--HVSTAVVGTYGYAAPEYIET-GHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQ-KLLEWVKQFPA 305 (393)
Q Consensus 230 a~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~-~~~~~~~~~~~ 305 (393)
+......... .......|+..|+|||.+.+ ..++.++||||+||++|+|++|.+||......... ....... .+.
T Consensus 152 a~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~-~~~ 230 (332)
T cd07857 152 ARGFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLG-TPD 230 (332)
T ss_pred ceecccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhC-CCC
Confidence 9764432211 11233578999999998765 56899999999999999999999999765422110 0111000 000
Q ss_pred CC-------cc-------cccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHh
Q 035862 306 DG-------KK-------FSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQ 360 (393)
Q Consensus 306 ~~-------~~-------~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~~~ 360 (393)
.. .. ........+. ......+..+.+|+.+||+.||.+|||+.+++.+.|...-
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~~~~~~~ 298 (332)
T cd07857 231 EETLSRIGSPKAQNYIRSLPNIPKKPFE-SIFPNANPLALDLLEKLLAFDPTKRISVEEALEHPYLAIW 298 (332)
T ss_pred HHHHHhhhhhhHHHHHHhccccCCcchH-hhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhhhh
Confidence 00 00 0000000000 0001235678999999999999999999999999886443
No 334
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-40 Score=331.05 Aligned_cols=258 Identities=28% Similarity=0.342 Sum_probs=206.0
Q ss_pred HHHhcCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCC--cccHHHHHHHHHHhhcCCCCccceeeeeeec
Q 035862 68 REATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG--LQGHKQWLAEVQFLGVVSHPNLVKLLGYCST 145 (393)
Q Consensus 68 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 145 (393)
...+-+++...+||.|.||.||.|.+..++ ...|+|-+.-.. ......+.+|+.++..++|||+|+++|+-..
T Consensus 1231 snV~~rWqrg~~Ig~G~fG~VYtavN~~tG-----ellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvH 1305 (1509)
T KOG4645|consen 1231 SNVTFRWQRGNFIGGGTFGKVYTAVNLDTG-----ELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVH 1305 (1509)
T ss_pred ccceeeeccccccCCcceeeeEEeecCCcc-----chhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeec
Confidence 334457888889999999999999966544 358888765432 2233556789999999999999999999887
Q ss_pred CCcccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEe
Q 035862 146 EDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLS 225 (393)
Q Consensus 146 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~ 225 (393)
.+. .+|.||||++|+|.+.+ ....-.++.....+..|++.|++|||++ |||||||||+||+++.+|.+|++
T Consensus 1306 Rek----v~IFMEyC~~GsLa~ll--~~gri~dE~vt~vyt~qll~gla~LH~~---gIVHRDIK~aNI~Ld~~g~iK~~ 1376 (1509)
T KOG4645|consen 1306 REK----VYIFMEYCEGGSLASLL--EHGRIEDEMVTRVYTKQLLEGLAYLHEH---GIVHRDIKPANILLDFNGLIKYG 1376 (1509)
T ss_pred HHH----HHHHHHHhccCcHHHHH--HhcchhhhhHHHHHHHHHHHHHHHHHhc---CceecCCCccceeeecCCcEEee
Confidence 774 48899999999999988 3444467777788999999999999999 99999999999999999999999
Q ss_pred eccCCccCCCCCCc--cccccccccCCccCccccccC---CCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHH
Q 035862 226 DFGLAREGPTGDHT--HVSTAVVGTYGYAAPEYIETG---HLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWV 300 (393)
Q Consensus 226 Dfg~a~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~ 300 (393)
|||.|........+ ......+||+.|||||++.+. ....+.|||||||++.||+||+.||...+......+...+
T Consensus 1377 DFGsa~ki~~~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIMy~V~~ 1456 (1509)
T KOG4645|consen 1377 DFGSAVKIKNNAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIMYHVAA 1456 (1509)
T ss_pred cccceeEecCchhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhHHHhHHhc
Confidence 99999875443211 123467999999999999764 4567899999999999999999999876655443332222
Q ss_pred hhcCcCCcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 035862 301 KQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESL 355 (393)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l 355 (393)
. -.++.|..++.+..+||..||..||+.|+++.|+++|-
T Consensus 1457 g----------------h~Pq~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~~ 1495 (1509)
T KOG4645|consen 1457 G----------------HKPQIPERLSSEGRDFLEHCLEQDPKMRWTASQLLEHA 1495 (1509)
T ss_pred c----------------CCCCCchhhhHhHHHHHHHHHhcCchhhhHHHHHHHhh
Confidence 1 12334555889999999999999999999999888774
No 335
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=8.8e-39 Score=292.48 Aligned_cols=259 Identities=29% Similarity=0.440 Sum_probs=196.3
Q ss_pred CCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCc-ccHHHHHHHHHHhhcCC-CCccceeeeeeecCCccc
Q 035862 73 GFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL-QGHKQWLAEVQFLGVVS-HPNLVKLLGYCSTEDERG 150 (393)
Q Consensus 73 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~ 150 (393)
+|...+.||+|+||.||++.+..+ +..+|+|.+..... .....+.+|+.++..+. ||||+++++++..++
T Consensus 5 ~~~~~~~lg~G~~g~vy~~~~~~~-----~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~--- 76 (288)
T cd06616 5 DLKDLGEIGRGAFGTVNKMLHKPS-----GTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREG--- 76 (288)
T ss_pred HhHHHHHhCCCCceEEEEEEECCC-----CCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCC---
Confidence 466677899999999999987543 34699999875432 33456788999999986 999999999887765
Q ss_pred ceEEEEEeecCCCChHHHH---hhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeec
Q 035862 151 IQRLLVYEYMPNRSLEDRL---FSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDF 227 (393)
Q Consensus 151 ~~~~lv~e~~~~~~L~~~l---~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Df 227 (393)
..+++|||+. ++|.++. .......+++..+..++.|++.||+|||+. .+++||||||+||+++.++.++|+||
T Consensus 77 -~~~~~~e~~~-~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~--~~i~H~dlkp~Nil~~~~~~~kl~df 152 (288)
T cd06616 77 -DCWICMELMD-ISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEE--LKIIHRDVKPSNILLDRNGNIKLCDF 152 (288)
T ss_pred -cEEEEEeccc-CCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhc--CCeeccCCCHHHEEEccCCcEEEeec
Confidence 4489999985 4665543 223346789999999999999999999963 28999999999999999999999999
Q ss_pred cCCccCCCCCCccccccccccCCccCccccccC---CCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcC
Q 035862 228 GLAREGPTGDHTHVSTAVVGTYGYAAPEYIETG---HLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFP 304 (393)
Q Consensus 228 g~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~ 304 (393)
|++....... ......|+..|+|||++.+. .++.++|||||||++|+|++|+.||.......+. .......
T Consensus 153 g~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~-~~~~~~~-- 226 (288)
T cd06616 153 GISGQLVDSI---AKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNSVFDQ-LTQVVKG-- 226 (288)
T ss_pred chhHHhccCC---ccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcchHHHH-HhhhcCC--
Confidence 9987543322 11234678899999998766 6899999999999999999999999754321111 1111100
Q ss_pred cCCcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q 035862 305 ADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLA 358 (393)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~ 358 (393)
.. +.+.......++.++.+|+.+||+.+|++|||+.+++.+.+..
T Consensus 227 -~~--------~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~~~~~ 271 (288)
T cd06616 227 -DP--------PILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLEHPFIK 271 (288)
T ss_pred -CC--------CcCCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcChhhh
Confidence 00 0111111123567899999999999999999999999998764
No 336
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=2.1e-38 Score=289.08 Aligned_cols=267 Identities=28% Similarity=0.355 Sum_probs=201.0
Q ss_pred CcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcc--cHHHHHHHHHHhhcCCCCccceeeeeeecCCcccc
Q 035862 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQ--GHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGI 151 (393)
Q Consensus 74 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 151 (393)
|++.+.||.|++|.||+|.... .+..+++|.+...... ....+.+|+.+++.++|+||+++++++...+
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~-----~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~---- 71 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKL-----TGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKG---- 71 (283)
T ss_pred CccceeeecCCCceEEEEEcCC-----CCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCC----
Confidence 6677899999999999998643 3446999988754322 3456778999999999999999999987765
Q ss_pred eEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCCc
Q 035862 152 QRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAR 231 (393)
Q Consensus 152 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~ 231 (393)
..++||||+.+ +|.+++.... ..+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||.+.
T Consensus 72 ~~~~v~e~~~~-~l~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~df~~~~ 146 (283)
T cd05118 72 DLYLVFEFMDT-DLYKLIKDRQ-RGLPESLIKSYLYQLLQGLAFCHSH---GILHRDLKPENLLINTEGVLKLADFGLAR 146 (283)
T ss_pred CEEEEEeccCC-CHHHHHHhhc-ccCCHHHHHHHHHHHHHHHHHHHHC---CeeecCcCHHHEEECCCCcEEEeeeeeeE
Confidence 56999999965 8888875433 5689999999999999999999998 99999999999999999999999999987
Q ss_pred cCCCCCCccccccccccCCccCccccccC-CCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHH-HHHh-hcCcCCc
Q 035862 232 EGPTGDHTHVSTAVVGTYGYAAPEYIETG-HLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLL-EWVK-QFPADGK 308 (393)
Q Consensus 232 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~-~~~~-~~~~~~~ 308 (393)
...... .......++..|+|||.+.+. .++.++|+||||+++|+|++|+.||...+........ .... ..+....
T Consensus 147 ~~~~~~--~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (283)
T cd05118 147 SFGSPV--RPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWP 224 (283)
T ss_pred ecCCCc--ccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcc
Confidence 654432 112334678899999998776 7899999999999999999999999765543221111 1000 0000000
Q ss_pred cccc-------ccCc---ccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 035862 309 KFSM-------MIDP---RLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLK 356 (393)
Q Consensus 309 ~~~~-------~~~~---~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~ 356 (393)
.+.. .... .........++.++.+||.+||++||.+||++.+++.+.|
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~~~ 282 (283)
T cd05118 225 KFTSLARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAHPY 282 (283)
T ss_pred cchhhhhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhCCC
Confidence 0000 0000 0001112346788999999999999999999999998865
No 337
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3e-39 Score=278.69 Aligned_cols=263 Identities=21% Similarity=0.314 Sum_probs=207.3
Q ss_pred ceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcccHHHHHHHHHHhhcCC-CCccceeeeeeecCCcccceEEEE
Q 035862 78 LKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVS-HPNLVKLLGYCSTEDERGIQRLLV 156 (393)
Q Consensus 78 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~~lv 156 (393)
..||+|+++.|-.+....++. .||||++.+.....+.+.++|++++.+++ |+||+++++||.++. ..|||
T Consensus 84 e~LGeGAyasVqtcv~i~t~~-----EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~----~FYLV 154 (463)
T KOG0607|consen 84 ELLGEGAYASVQTCVSIQTGK-----EYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDT----RFYLV 154 (463)
T ss_pred HHhcCccceeeeeeeeeccch-----hhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccc----eEEEE
Confidence 469999999999988765554 49999999987778889999999999998 999999999999887 45999
Q ss_pred EeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCc---eEEeeccCCccC
Q 035862 157 YEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFK---PKLSDFGLAREG 233 (393)
Q Consensus 157 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~---~kl~Dfg~a~~~ 233 (393)
||-+.||+|...|. +...+++.++..+..+|+.||.|||.+ ||.|||+||+|||-.+... +|||||.+....
T Consensus 155 fEKm~GGplLshI~--~~~~F~E~EAs~vvkdia~aLdFlH~k---gIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~ 229 (463)
T KOG0607|consen 155 FEKMRGGPLLSHIQ--KRKHFNEREASRVVKDIASALDFLHTK---GIAHRDLKPENILCESPNKVSPVKICDFDLGSGI 229 (463)
T ss_pred EecccCchHHHHHH--HhhhccHHHHHHHHHHHHHHHHHHhhc---CcccccCCccceeecCCCCcCceeeecccccccc
Confidence 99999999999994 445689999999999999999999999 9999999999999976554 899999887542
Q ss_pred CCCCCc-----cccccccccCCccCccccc-----cCCCCchhhHHHHHHHHHHHHhCCCccCCCCchh-----------
Q 035862 234 PTGDHT-----HVSTAVVGTYGYAAPEYIE-----TGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTM----------- 292 (393)
Q Consensus 234 ~~~~~~-----~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~----------- 292 (393)
...... ....+.+|+..|||||+.. ...|+.+.|.||||||+|-||+|++||.++....
T Consensus 230 k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~ 309 (463)
T KOG0607|consen 230 KLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRV 309 (463)
T ss_pred ccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHH
Confidence 221111 1223568999999999773 3468999999999999999999999997654421
Q ss_pred -hhHHHHHHhhcCcCCcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhhcCC
Q 035862 293 -EQKLLEWVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQESEQG 365 (393)
Q Consensus 293 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~~~~~~~~ 365 (393)
++++.+....-.. ++ ...-=..++.+..++++.+|..|+.+|.++.++++|+|.-....+.-
T Consensus 310 CQ~~LFesIQEGkY------eF-----PdkdWahIS~eakdlisnLlvrda~~rlsa~~vlnhPw~~~~~~eka 372 (463)
T KOG0607|consen 310 CQNKLFESIQEGKY------EF-----PDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLNHPWVQRCAPEKA 372 (463)
T ss_pred HHHHHHHHHhccCC------cC-----ChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccCCccccccchhcc
Confidence 1222222211000 00 00001257899999999999999999999999999998766555433
No 338
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=6.8e-39 Score=255.37 Aligned_cols=269 Identities=25% Similarity=0.349 Sum_probs=207.4
Q ss_pred CCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCC--CcccHHHHHHHHHHhhcCCCCccceeeeeeecCCccc
Q 035862 73 GFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNH--GLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERG 150 (393)
Q Consensus 73 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 150 (393)
+|...++||+|+||+||+|+.+.+ ...||+|.++-. ........++|+.+|+.++|.|||+++++...+.
T Consensus 3 ~ydkmekigegtygtvfkarn~~t-----~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdk--- 74 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRET-----HEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDK--- 74 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCc-----cceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCc---
Confidence 466677899999999999986544 457999988654 3334567889999999999999999999887766
Q ss_pred ceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCC
Q 035862 151 IQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLA 230 (393)
Q Consensus 151 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a 230 (393)
.+.+|+||| ..+|..+.. .-++.++.+.++.++.|+++||.|+|++ ++.|||+||.|+||+.+|++||+|||++
T Consensus 75 -kltlvfe~c-dqdlkkyfd-slng~~d~~~~rsfmlqllrgl~fchsh---nvlhrdlkpqnllin~ngelkladfgla 148 (292)
T KOG0662|consen 75 -KLTLVFEFC-DQDLKKYFD-SLNGDLDPEIVRSFMLQLLRGLGFCHSH---NVLHRDLKPQNLLINRNGELKLADFGLA 148 (292)
T ss_pred -eeEEeHHHh-hHHHHHHHH-hcCCcCCHHHHHHHHHHHHhhhhhhhhh---hhhhccCCcceEEeccCCcEEecccchh
Confidence 568999999 559988874 4456789999999999999999999998 9999999999999999999999999999
Q ss_pred ccCCCCCCccccccccccCCccCccccccC-CCCchhhHHHHHHHHHHHHh-CCCccCCCCchhhhHHHHHHhhcCcCCc
Q 035862 231 REGPTGDHTHVSTAVVGTYGYAAPEYIETG-HLKSQSDIWSFGVVLYEILT-GRRVLERNRPTMEQKLLEWVKQFPADGK 308 (393)
Q Consensus 231 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 308 (393)
+.+...-. -.+..+-|.+|.+|.++.+. -|+...|+||.|||+.|+.. |++.|++++-..+...+.+....|....
T Consensus 149 rafgipvr--cysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~ 226 (292)
T KOG0662|consen 149 RAFGIPVR--CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQ 226 (292)
T ss_pred hhcCCceE--eeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCcccc
Confidence 97654332 23456789999999999775 58999999999999999987 6666766655444444444444333221
Q ss_pred c--cccccCcccccccC---------HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 035862 309 K--FSMMIDPRLRNQYS---------INAARRVAKLADNCLKKNPEERPTMNQVVESLKL 357 (393)
Q Consensus 309 ~--~~~~~~~~~~~~~~---------~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~ 357 (393)
- ...+-|-.....++ +.....-.++++++|.-+|.+|.++++.++|...
T Consensus 227 wps~t~lpdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalqhpyf 286 (292)
T KOG0662|consen 227 WPSMTKLPDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQHPYF 286 (292)
T ss_pred CCccccCCCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcCccc
Confidence 1 11111111111122 2344566899999999999999999999998754
No 339
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.7e-41 Score=282.56 Aligned_cols=278 Identities=24% Similarity=0.352 Sum_probs=206.8
Q ss_pred cCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecC--CCcccHHHHHHHHHHhhcCCCCccceeeeeeecCCcc
Q 035862 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNN--HGLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDER 149 (393)
Q Consensus 72 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 149 (393)
+.|....+||+|.||.||+|+...++. .||+|++-- .........++|+++|..++|+|++.+++.|......
T Consensus 17 ~~yek~~kigqGtfgeVFkAr~~n~~k-----kvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp 91 (376)
T KOG0669|consen 17 SKYEKLAKIGQGTFGEVFKARSKNTGK-----KVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATP 91 (376)
T ss_pred hHHHHHHhcCCchHHHHHHHhhcCccc-----hhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCC
Confidence 468888899999999999998654443 377776532 2233345678999999999999999999988654433
Q ss_pred c----ceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEe
Q 035862 150 G----IQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLS 225 (393)
Q Consensus 150 ~----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~ 225 (393)
. ..+|+||++|+. +|..++.+.. ..++..++..++.+++.||.|+|++ .|+|||+||+|+||+.+|.+||+
T Consensus 92 ~~r~r~t~ylVf~~ceh-DLaGlLsn~~-vr~sls~Ikk~Mk~Lm~GL~~iHr~---kilHRDmKaaNvLIt~dgilklA 166 (376)
T KOG0669|consen 92 TNRDRATFYLVFDFCEH-DLAGLLSNRK-VRFSLSEIKKVMKGLMNGLYYIHRN---KILHRDMKAANVLITKDGILKLA 166 (376)
T ss_pred cccccceeeeeHHHhhh-hHHHHhcCcc-ccccHHHHHHHHHHHHHHHHHHHHh---hHHhhcccHhhEEEcCCceEEee
Confidence 2 347999999976 9988885443 4589999999999999999999999 99999999999999999999999
Q ss_pred eccCCccCCCCCCc--cccccccccCCccCcccccc-CCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHH-h
Q 035862 226 DFGLAREGPTGDHT--HVSTAVVGTYGYAAPEYIET-GHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWV-K 301 (393)
Q Consensus 226 Dfg~a~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~-~ 301 (393)
|||+++.+...... ...+..+-|.+|++||.+.+ ..|+.+.|||..|||+.||+|+.+.+.++.+.....++..+ .
T Consensus 167 DFGlar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcG 246 (376)
T KOG0669|consen 167 DFGLARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCG 246 (376)
T ss_pred ccccccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhc
Confidence 99999765443322 23445677999999998876 57999999999999999999999999887665443333222 1
Q ss_pred hcCcCCc------cccccc-----Cccccccc-----CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHH
Q 035862 302 QFPADGK------KFSMMI-----DPRLRNQY-----SINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAV 359 (393)
Q Consensus 302 ~~~~~~~------~~~~~~-----~~~~~~~~-----~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~~ 359 (393)
.+..+-. .+...+ .+...... +-.-.++..+|+.++|..||.+|+.+.++++|.+...
T Consensus 247 s~tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh~~F~k 320 (376)
T KOG0669|consen 247 SITKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNHDFFWK 320 (376)
T ss_pred cCCcccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhchhhhhc
Confidence 1111100 000000 00000000 0011357889999999999999999999999987654
No 340
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=100.00 E-value=8.5e-39 Score=299.69 Aligned_cols=274 Identities=22% Similarity=0.295 Sum_probs=201.7
Q ss_pred hcCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcccHHHHHHHHHHhhcCCCCccceeeeeeecCCccc
Q 035862 71 TNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERG 150 (393)
Q Consensus 71 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 150 (393)
..+|.+.+.||.|+||.||+|....+ +..|++|.+........+.+.+|+.+++.++||||+++++++.......
T Consensus 4 ~~~y~~~~~Lg~g~~g~vy~~~~~~~-----~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~ 78 (342)
T cd07854 4 GSRYMDLRPLGCGSNGLVFSAVDSDC-----DKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDL 78 (342)
T ss_pred CcceEEEEEecCCCCEEEEEEEECCC-----CcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhccccccc
Confidence 36799999999999999999986543 3469999987665555677889999999999999999998776543221
Q ss_pred ----------ceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeC-CC
Q 035862 151 ----------IQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLD-GN 219 (393)
Q Consensus 151 ----------~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~-~~ 219 (393)
...++||||+. ++|.+++. ...+++..++.++.||+.||.|||+. |++||||||+||+++ ++
T Consensus 79 ~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~---~~~l~~~~~~~~~~qi~~aL~~LH~~---givH~dikp~Nili~~~~ 151 (342)
T cd07854 79 TEDVGSLTELNSVYIVQEYME-TDLANVLE---QGPLSEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANVFINTED 151 (342)
T ss_pred ccccccccccceEEEEeeccc-ccHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCC
Confidence 14689999996 58988773 23588999999999999999999998 999999999999997 45
Q ss_pred CceEEeeccCCccCCCCCCc-cccccccccCCccCcccccc-CCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHH
Q 035862 220 FKPKLSDFGLAREGPTGDHT-HVSTAVVGTYGYAAPEYIET-GHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLL 297 (393)
Q Consensus 220 ~~~kl~Dfg~a~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~ 297 (393)
+.++|+|||++......... .......++..|+|||.+.+ ..++.++|||||||++|+|++|+.||....+......
T Consensus 152 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~- 230 (342)
T cd07854 152 LVLKIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQL- 230 (342)
T ss_pred ceEEECCcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH-
Confidence 67899999998754322111 11123467889999997654 5688899999999999999999999976554322211
Q ss_pred HHHhhcCcCCcc--------cccccC-ccc-----ccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q 035862 298 EWVKQFPADGKK--------FSMMID-PRL-----RNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLA 358 (393)
Q Consensus 298 ~~~~~~~~~~~~--------~~~~~~-~~~-----~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~ 358 (393)
.....+..... ...... ... ........+.++.+|+.+||+.||.+|||+.+++.|.|..
T Consensus 231 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h~~~~ 304 (342)
T cd07854 231 -ILESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMHPYMS 304 (342)
T ss_pred -HHHhcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCCCccc
Confidence 11111111000 000000 000 0001113457889999999999999999999999998774
No 341
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=2.7e-38 Score=288.79 Aligned_cols=270 Identities=26% Similarity=0.382 Sum_probs=200.2
Q ss_pred CcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCC--cccHHHHHHHHHHhhcCCCCccceeeeeeecCCcccc
Q 035862 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG--LQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGI 151 (393)
Q Consensus 74 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 151 (393)
|++.+.||.|++|.||+|.+... +..+++|.+.... ......+.+|+.+++.++|||++++++++......
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~-----~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~-- 73 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKT-----GELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKG-- 73 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCC-----CeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCC--
Confidence 67788999999999999986543 3469999998653 23345677899999999999999999999876211
Q ss_pred eEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCCc
Q 035862 152 QRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAR 231 (393)
Q Consensus 152 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~ 231 (393)
..++||||+.+ +|.+++.... ..+++..++.++.|++.||+|||+. +++|+||+|+||++++++.++|+|||++.
T Consensus 74 ~~~lv~e~~~~-~l~~~~~~~~-~~~~~~~~~~i~~~i~~al~~LH~~---~~~h~dl~p~nil~~~~~~~~l~d~g~~~ 148 (287)
T cd07840 74 SIYMVFEYMDH-DLTGLLDSPE-VKFTESQIKCYMKQLLEGLQYLHSN---GILHRDIKGSNILINNDGVLKLADFGLAR 148 (287)
T ss_pred cEEEEeccccc-cHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEEcCCCCEEEcccccee
Confidence 56999999965 8988875432 4689999999999999999999998 99999999999999999999999999997
Q ss_pred cCCCCCCccccccccccCCccCcccccc-CCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHH-HHHHhhcCcCC-c
Q 035862 232 EGPTGDHTHVSTAVVGTYGYAAPEYIET-GHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKL-LEWVKQFPADG-K 308 (393)
Q Consensus 232 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~-~~~~~~~~~~~-~ 308 (393)
....... .......++..|+|||.+.+ ..++.++||||||+++|+|++|..||........... ........... .
T Consensus 149 ~~~~~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (287)
T cd07840 149 PYTKRNS-ADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWP 227 (287)
T ss_pred eccCCCc-ccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhcc
Confidence 6544321 11233456788999997765 4678999999999999999999999976554322111 11111100000 0
Q ss_pred ccccc-----------cCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 035862 309 KFSMM-----------IDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLK 356 (393)
Q Consensus 309 ~~~~~-----------~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~ 356 (393)
....+ ....+.......++..+.+++.+||+.+|.+||++.+++++.|
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~~~ 286 (287)
T cd07840 228 GVSKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQHEY 286 (287)
T ss_pred ccccchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhCcC
Confidence 00000 0000111111113678999999999999999999999998764
No 342
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=7.1e-38 Score=283.33 Aligned_cols=252 Identities=25% Similarity=0.337 Sum_probs=193.3
Q ss_pred HHHHhcCCccccee--cccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcccHHHHHHHHHHhhcC-CCCccceeeeee
Q 035862 67 LREATNGFNRMLKI--GEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVV-SHPNLVKLLGYC 143 (393)
Q Consensus 67 ~~~~~~~y~~~~~l--g~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~ 143 (393)
.....++|.+.+.+ |.|+||.||++....+ +..+++|.......... |+.....+ +||||+++++.+
T Consensus 9 ~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~-----~~~~~~k~~~~~~~~~~-----e~~~~~~~~~h~~iv~~~~~~ 78 (267)
T PHA03390 9 LVQFLKNCEIVKKLKLIDGKFGKVSVLKHKPT-----QKLFVQKIIKAKNFNAI-----EPMVHQLMKDNPNFIKLYYSV 78 (267)
T ss_pred HHHHHHhhccccceeecCCCceEEEEEEEcCC-----CcEEEEEEEehhhcchh-----hHHHHHHhhcCCCEEEEEEEE
Confidence 34445677777777 9999999999986543 34689998865432211 22222222 699999999999
Q ss_pred ecCCcccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCC-ce
Q 035862 144 STEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNF-KP 222 (393)
Q Consensus 144 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~-~~ 222 (393)
...+ ..++||||+++++|.+++... ..+++..++.++.|++.||.|||+. +++||||||+||+++.++ .+
T Consensus 79 ~~~~----~~~iv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~ 149 (267)
T PHA03390 79 TTLK----GHVLIMDYIKDGDLFDLLKKE--GKLSEAEVKKIIRQLVEALNDLHKH---NIIHNDIKLENVLYDRAKDRI 149 (267)
T ss_pred ecCC----eeEEEEEcCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEeCCCCeE
Confidence 8876 569999999999999998543 3789999999999999999999998 999999999999999998 99
Q ss_pred EEeeccCCccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhh
Q 035862 223 KLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQ 302 (393)
Q Consensus 223 kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~ 302 (393)
+|+|||++...... ....++..|+|||++.+..++.++||||+|+++|+|++|..||....... .....+...
T Consensus 150 ~l~dfg~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~-~~~~~~~~~ 222 (267)
T PHA03390 150 YLCDYGLCKIIGTP------SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEE-LDLESLLKR 222 (267)
T ss_pred EEecCccceecCCC------ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcch-hhHHHHHHh
Confidence 99999998754322 22467889999999998899999999999999999999999997443221 111111111
Q ss_pred cCcCCcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCC-HHHHHHHHHH
Q 035862 303 FPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPT-MNQVVESLKL 357 (393)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps-~~~~l~~l~~ 357 (393)
... ........+..+.+||.+||+.+|.+||+ ++++++|.|.
T Consensus 223 ~~~-------------~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~h~~~ 265 (267)
T PHA03390 223 QQK-------------KLPFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIKHPFL 265 (267)
T ss_pred hcc-------------cCCcccccCHHHHHHHHHHhccChhhCCchHHHHhcCCcc
Confidence 100 00111245688999999999999999996 6999988764
No 343
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=4.9e-38 Score=282.28 Aligned_cols=250 Identities=25% Similarity=0.381 Sum_probs=202.0
Q ss_pred CCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCC--cccHHHHHHHHHHhhcCCCCccceeeeeeecCCccc
Q 035862 73 GFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG--LQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERG 150 (393)
Q Consensus 73 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 150 (393)
+|++.+.||.|+||.||++....+ +..+++|.+.... ......+.+|+++++.++|+||+++++++....
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~-----~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--- 72 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSD-----NQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGN--- 72 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCC-----CCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCC---
Confidence 488899999999999999986533 3458999887542 233456678999999999999999999887765
Q ss_pred ceEEEEEeecCCCChHHHHhhc--CCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeecc
Q 035862 151 IQRLLVYEYMPNRSLEDRLFSR--AQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFG 228 (393)
Q Consensus 151 ~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg 228 (393)
..++||||+++++|.+++... ....+++..++.++.|++.||.|||+. |++|+||+|+||++++++.+||+|||
T Consensus 73 -~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~---~i~h~~l~~~ni~~~~~~~~kl~d~g 148 (256)
T cd08530 73 -KLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQ---KILHRDLKSANILLVANDLVKIGDLG 148 (256)
T ss_pred -EEEEEehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEEecCCcEEEeecc
Confidence 569999999999999988542 235688999999999999999999998 99999999999999999999999999
Q ss_pred CCccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcCCc
Q 035862 229 LAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGK 308 (393)
Q Consensus 229 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 308 (393)
++...... ......++..|+|||.+.+..++.++|+||||+++|+|++|+.||......... .....
T Consensus 149 ~~~~~~~~----~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~---~~~~~------ 215 (256)
T cd08530 149 ISKVLKKN----MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLR---YKVQR------ 215 (256)
T ss_pred chhhhccC----CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH---HHHhc------
Confidence 99765443 122356788999999999999999999999999999999999999765432111 11100
Q ss_pred ccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 035862 309 KFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESL 355 (393)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l 355 (393)
......+...+.++.+++.+||+.+|++||++.++++++
T Consensus 216 --------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~p 254 (256)
T cd08530 216 --------GKYPPIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILASP 254 (256)
T ss_pred --------CCCCCCchhhCHHHHHHHHHHcCCCcccCCCHHHHhcCC
Confidence 011112234668899999999999999999999999874
No 344
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-39 Score=319.92 Aligned_cols=285 Identities=24% Similarity=0.280 Sum_probs=218.6
Q ss_pred HHHHHhcCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCc---ccHHHHHHHHHHhhcCCCCccceeeee
Q 035862 66 ELREATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL---QGHKQWLAEVQFLGVVSHPNLVKLLGY 142 (393)
Q Consensus 66 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~ 142 (393)
+++-..++|.++++||+|+||.|.+++.+.++ .+||+|++.+... ....-|..|-.+|..-+.+.|++++-.
T Consensus 69 ~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~-----~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyA 143 (1317)
T KOG0612|consen 69 ELRLKAEDFEILKVIGRGAFGEVALVRHKSTE-----KVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYA 143 (1317)
T ss_pred HHhCCHHhhHHHHHhcccccceeEEEEeeccc-----cchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHH
Confidence 34444679999999999999999999975444 5799999987432 233457788899999999999999988
Q ss_pred eecCCcccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCce
Q 035862 143 CSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKP 222 (393)
Q Consensus 143 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~ 222 (393)
|.++. ++|+||||+.||+|-.++.+. ..+|+..++.++..|+.||..||+. |+|||||||+|||++..|++
T Consensus 144 FQD~~----~LYlVMdY~pGGDlltLlSk~--~~~pE~~ArFY~aEiVlAldslH~m---gyVHRDiKPDNvLld~~GHi 214 (1317)
T KOG0612|consen 144 FQDER----YLYLVMDYMPGGDLLTLLSKF--DRLPEDWARFYTAEIVLALDSLHSM---GYVHRDIKPDNVLLDKSGHI 214 (1317)
T ss_pred hcCcc----ceEEEEecccCchHHHHHhhc--CCChHHHHHHHHHHHHHHHHHHHhc---cceeccCCcceeEecccCcE
Confidence 88777 789999999999999998443 3799999999999999999999998 99999999999999999999
Q ss_pred EEeeccCCccCCCCCCccccccccccCCccCccccc----c-CCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhh-HH
Q 035862 223 KLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIE----T-GHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQ-KL 296 (393)
Q Consensus 223 kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~----~-~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~-~~ 296 (393)
||+|||.+-..... ........+|||.|.+||++. + +.|+..+|.||+||++|||+.|..||...+-.... .+
T Consensus 215 kLADFGsClkm~~d-G~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~KI 293 (1317)
T KOG0612|consen 215 KLADFGSCLKMDAD-GTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGKI 293 (1317)
T ss_pred eeccchhHHhcCCC-CcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHHH
Confidence 99999988766433 334567789999999999995 3 57899999999999999999999999754321111 11
Q ss_pred HHHHhhcCcCCcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCC---HHHHHHHHHHHH--hhhcCCCCCCCC
Q 035862 297 LEWVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPT---MNQVVESLKLAV--QESEQGSSSTTT 371 (393)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps---~~~~l~~l~~~~--~~~~~~~~~~~~ 371 (393)
......+.+ + ....+|.++.+||.+.+ -+|+.|.. ++++-.|++..- .++--++.+|..
T Consensus 294 m~hk~~l~F-------------P--~~~~VSeeakdLI~~ll-~~~e~RLgrngiedik~HpFF~g~~W~~iR~~~pP~v 357 (1317)
T KOG0612|consen 294 MNHKESLSF-------------P--DETDVSEEAKDLIEALL-CDREVRLGRNGIEDIKNHPFFEGIDWDNIRESVPPVV 357 (1317)
T ss_pred hchhhhcCC-------------C--cccccCHHHHHHHHHHh-cChhhhcccccHHHHHhCccccCCChhhhhhcCCCCC
Confidence 111000100 0 11247899999999988 67889998 999999976532 122223444544
Q ss_pred CCCCCCCCCc
Q 035862 372 AAKTPVTSSS 381 (393)
Q Consensus 372 ~~~~~~~~~~ 381 (393)
+..++..-+|
T Consensus 358 Pevssd~DTs 367 (1317)
T KOG0612|consen 358 PEVSSDDDTS 367 (1317)
T ss_pred CcCCCCCccc
Confidence 4444443333
No 345
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=8.6e-38 Score=280.26 Aligned_cols=250 Identities=32% Similarity=0.459 Sum_probs=202.0
Q ss_pred CCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCc--ccHHHHHHHHHHhhcCCCCccceeeeeeecCCccc
Q 035862 73 GFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL--QGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERG 150 (393)
Q Consensus 73 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 150 (393)
+|++.+.||+|++|.||+|.+...+ ..|++|.+..... .....+.+|+++++.++|||++++++++....
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~-----~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--- 72 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETG-----DFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSD--- 72 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCC-----cEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCC---
Confidence 4788899999999999999865333 3599999877643 34567889999999999999999999987765
Q ss_pred ceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCC
Q 035862 151 IQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLA 230 (393)
Q Consensus 151 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a 230 (393)
..+++|||+.+++|.+++... ..+++..++.++.|++.||.+||+. |++||||+|+||+++.++.++|+|||++
T Consensus 73 -~~~~v~e~~~~~~L~~~~~~~--~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~~~~ 146 (254)
T cd06627 73 -SLYIILEYAENGSLRQIIKKF--GPFPESLVAVYVYQVLQGLAYLHEQ---GVIHRDIKAANILTTKDGVVKLADFGVA 146 (254)
T ss_pred -EEEEEEecCCCCcHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEECCCCCEEEeccccc
Confidence 569999999999999998543 5689999999999999999999998 9999999999999999999999999999
Q ss_pred ccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcCCccc
Q 035862 231 REGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKF 310 (393)
Q Consensus 231 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (393)
......... .....++..|+|||.+.+..++.++||||+|+++|+|++|..||........ ..... . .
T Consensus 147 ~~~~~~~~~--~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~--~~~~~-~--~----- 214 (254)
T cd06627 147 TKLNDVSKD--DASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMAA--LFRIV-Q--D----- 214 (254)
T ss_pred eecCCCccc--ccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHH--HHHHh-c--c-----
Confidence 865443221 2345678899999999888889999999999999999999999975442211 11110 0 0
Q ss_pred ccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 035862 311 SMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESL 355 (393)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l 355 (393)
.....+..++..+.+++.+||..+|++||++.+++.+-
T Consensus 215 -------~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~ 252 (254)
T cd06627 215 -------DHPPLPEGISPELKDFLMQCFQKDPNLRPTAKQLLKHP 252 (254)
T ss_pred -------CCCCCCCCCCHHHHHHHHHHHhCChhhCcCHHHHhcCC
Confidence 00111223467889999999999999999999998763
No 346
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=1.3e-37 Score=288.41 Aligned_cols=265 Identities=23% Similarity=0.286 Sum_probs=194.8
Q ss_pred ceecccCCceEEEEEEcCCCCCCCceEEEEEEecCC--CcccHHHHHHHHHHhhcCCCCccceeeeeeecCCcccceEEE
Q 035862 78 LKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNH--GLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLL 155 (393)
Q Consensus 78 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~l 155 (393)
+.+|.| |.||.+.... .+..||+|++... .......+.+|+.+++.++||||+++++++...+ ..++
T Consensus 8 ~~~~~~--~~v~~~~~~~-----~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~----~~~~ 76 (314)
T cd08216 8 KCFEDL--MIVHLAKHKP-----TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDS----ELYV 76 (314)
T ss_pred HhhcCC--ceEEEEEecC-----CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCC----eEEE
Confidence 334444 4455555332 3446999998754 2334567889999999999999999999988766 4599
Q ss_pred EEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCCccCCC
Q 035862 156 VYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPT 235 (393)
Q Consensus 156 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~ 235 (393)
+|||+.+++|.+++.......+++..+..++.|++.||.|||++ +|+||||||+||+++.++.+||+|||.+.....
T Consensus 77 ~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~---~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~ 153 (314)
T cd08216 77 VSPLMAYGSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSK---GFIHRSVKASHILLSGDGKVVLSGLRYSVSMIK 153 (314)
T ss_pred EEeccCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCcceEEEecCCceEEecCccceeecc
Confidence 99999999999999765556789999999999999999999998 999999999999999999999999998865432
Q ss_pred CCCc-----cccccccccCCccCcccccc--CCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHh-hc----
Q 035862 236 GDHT-----HVSTAVVGTYGYAAPEYIET--GHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVK-QF---- 303 (393)
Q Consensus 236 ~~~~-----~~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~-~~---- 303 (393)
.... .......++..|+|||++.+ ..++.++||||+||++|+|++|..||........ ..+... ..
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~--~~~~~~~~~~~~~ 231 (314)
T cd08216 154 HGKRQRVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQM--LLEKVRGTVPCLL 231 (314)
T ss_pred ccccccccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHhccCcccc
Confidence 2211 11233457778999999865 4588999999999999999999999976543221 111111 00
Q ss_pred -----CcCCccccc--------ccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q 035862 304 -----PADGKKFSM--------MIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLA 358 (393)
Q Consensus 304 -----~~~~~~~~~--------~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~ 358 (393)
+........ ..............+.++.+|+.+||+.||++|||+.++++|.+..
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p~~~ 299 (314)
T cd08216 232 DKSTYPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNHSFFK 299 (314)
T ss_pred ccCchhhhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcCchHh
Confidence 000000000 0001112223335678899999999999999999999999998865
No 347
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=100.00 E-value=5.8e-38 Score=293.38 Aligned_cols=269 Identities=24% Similarity=0.319 Sum_probs=198.5
Q ss_pred cCCcc-cceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCccc--------------HHHHHHHHHHhhcCCCCcc
Q 035862 72 NGFNR-MLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQG--------------HKQWLAEVQFLGVVSHPNL 136 (393)
Q Consensus 72 ~~y~~-~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~--------------~~~~~~E~~~l~~l~h~ni 136 (393)
++|.. .+.||.|+||.||+|.+... +..||+|.+....... ...+.+|+++++.++||||
T Consensus 8 ~ry~~~~~~ig~G~~g~vy~~~~~~~-----~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i 82 (335)
T PTZ00024 8 ERYIQKGAHLGEGTYGKVEKAYDTLT-----GKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENI 82 (335)
T ss_pred cchhhhhhcccCCCceeEEEEEECCC-----CCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcce
Confidence 45654 46799999999999986533 3469999886542221 1246789999999999999
Q ss_pred ceeeeeeecCCcccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEe
Q 035862 137 VKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLL 216 (393)
Q Consensus 137 v~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll 216 (393)
+++++++...+ ..++||||+. ++|.+++. ....+++..+..++.|++.||.|||+. |++|+||+|+||++
T Consensus 83 v~~~~~~~~~~----~~~lv~e~~~-~~l~~~l~--~~~~~~~~~~~~~~~ql~~aL~~LH~~---~i~H~dl~~~nill 152 (335)
T PTZ00024 83 MGLVDVYVEGD----FINLVMDIMA-SDLKKVVD--RKIRLTESQVKCILLQILNGLNVLHKW---YFMHRDLSPANIFI 152 (335)
T ss_pred eeeeEEEecCC----cEEEEEeccc-cCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHeEE
Confidence 99999998766 5699999996 59999884 344689999999999999999999998 99999999999999
Q ss_pred CCCCceEEeeccCCccCCCCCC------------ccccccccccCCccCccccccC-CCCchhhHHHHHHHHHHHHhCCC
Q 035862 217 DGNFKPKLSDFGLAREGPTGDH------------THVSTAVVGTYGYAAPEYIETG-HLKSQSDIWSFGVVLYEILTGRR 283 (393)
Q Consensus 217 ~~~~~~kl~Dfg~a~~~~~~~~------------~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslGvil~elltg~~ 283 (393)
+.++.++|+|||++........ ........++..|+|||.+.+. .++.++|||||||++|+|++|..
T Consensus 153 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~ 232 (335)
T PTZ00024 153 NSKGICKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKP 232 (335)
T ss_pred CCCCCEEECCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCC
Confidence 9999999999999876441110 1111234567889999998764 46899999999999999999999
Q ss_pred ccCCCCchhhhH-HHHHHhhcCcCCccccc------------ccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHH
Q 035862 284 VLERNRPTMEQK-LLEWVKQFPADGKKFSM------------MIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQ 350 (393)
Q Consensus 284 pf~~~~~~~~~~-~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ 350 (393)
||....+..... +...... +... .+.. ....... ......+.++.+++.+||+.+|++||++.+
T Consensus 233 p~~~~~~~~~~~~i~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~P~~R~s~~~ 309 (335)
T PTZ00024 233 LFPGENEIDQLGRIFELLGT-PNED-NWPQAKKLPLYTEFTPRKPKDLK-TIFPNASDDAIDLLQSLLKLNPLERISAKE 309 (335)
T ss_pred CCCCCCHHHHHHHHHHHhCC-Cchh-hCcchhhcccccccCcCCcccHH-HhCcCCChHHHHHHHHHcCCCchhccCHHH
Confidence 997665432211 1111111 1100 0000 0000000 011124577899999999999999999999
Q ss_pred HHHHHHHH
Q 035862 351 VVESLKLA 358 (393)
Q Consensus 351 ~l~~l~~~ 358 (393)
++.|.|..
T Consensus 310 ~l~~~~~~ 317 (335)
T PTZ00024 310 ALKHEYFK 317 (335)
T ss_pred HhcCcccC
Confidence 99998875
No 348
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=100.00 E-value=3.7e-38 Score=291.40 Aligned_cols=275 Identities=26% Similarity=0.331 Sum_probs=199.4
Q ss_pred hcCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCc--ccHHHHHHHHHHhhcCCCCccceeeeeeecCCc
Q 035862 71 TNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL--QGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDE 148 (393)
Q Consensus 71 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 148 (393)
.++|++.+.||.|+||.||+|.+..++ ..+++|.+..... .....+.+|+++++.++||||+++++++.....
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~-----~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 81 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTG-----RVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPD 81 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCC-----cEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheecccc
Confidence 468999999999999999999965443 3589998764322 123456789999999999999999998765442
Q ss_pred c----cceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEE
Q 035862 149 R----GIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKL 224 (393)
Q Consensus 149 ~----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl 224 (393)
. ...+++||||+.+ +|...+.. ....+++..+..++.|++.||.|||+. |++|+||||+||++++++.++|
T Consensus 82 ~~~~~~~~~~lv~~~~~~-~l~~~~~~-~~~~~~~~~~~~i~~~l~~al~~lH~~---~i~H~dl~p~nil~~~~~~~~l 156 (311)
T cd07866 82 KSKRKRGSVYMVTPYMDH-DLSGLLEN-PSVKLTESQIKCYMLQLLEGINYLHEN---HILHRDIKAANILIDNQGILKI 156 (311)
T ss_pred cccccCceEEEEEecCCc-CHHHHHhc-cccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEE
Confidence 2 2356899999955 77776643 234689999999999999999999998 9999999999999999999999
Q ss_pred eeccCCccCCCCCCc---------cccccccccCCccCcccccc-CCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhh
Q 035862 225 SDFGLAREGPTGDHT---------HVSTAVVGTYGYAAPEYIET-GHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQ 294 (393)
Q Consensus 225 ~Dfg~a~~~~~~~~~---------~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~ 294 (393)
+|||++......... .......+++.|+|||.+.+ ..++.++|||||||++|+|++|.+||.........
T Consensus 157 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~ 236 (311)
T cd07866 157 ADFGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQL 236 (311)
T ss_pred CcCccchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 999999754332211 11223467888999998765 45889999999999999999999999765543222
Q ss_pred HH-HHHHhhcCcCCcc----ccc--------ccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 035862 295 KL-LEWVKQFPADGKK----FSM--------MIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLK 356 (393)
Q Consensus 295 ~~-~~~~~~~~~~~~~----~~~--------~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~ 356 (393)
.. ............. ... ...+.+... -......+.+|+.+||+.||.+|||+.+++.|.|
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~~~ 310 (311)
T cd07866 237 HLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEER-FGKLGPEGLDLLSKLLSLDPYKRLTASDALEHPY 310 (311)
T ss_pred HHHHHHhCCCChhhchhhhhcccccccccCCCCCccHHHH-cccCChhHHHHHHHHcccCcccCcCHHHHhcCCC
Confidence 11 1111111000000 000 000000000 0123367889999999999999999999998764
No 349
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=8e-38 Score=288.08 Aligned_cols=275 Identities=27% Similarity=0.345 Sum_probs=200.8
Q ss_pred HhcCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCC--cccHHHHHHHHHHhhcCCCCccceeeeeeecCC
Q 035862 70 ATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG--LQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTED 147 (393)
Q Consensus 70 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 147 (393)
..++|++.+.||+|+||.||+|.+..+ +..|++|.+.... ......+.+|+++++.++||||+++++++....
T Consensus 5 ~~~~~~~~~~lg~g~~g~v~~~~~~~~-----~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~ 79 (302)
T cd07864 5 CVDKFDIIGQIGEGTYGQVYKARDKDT-----GELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQ 79 (302)
T ss_pred hhhhhheeeeecccCCEEEEEEEECCC-----CcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcc
Confidence 457899999999999999999997543 3468999886542 222345678999999999999999999887654
Q ss_pred c------ccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCc
Q 035862 148 E------RGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFK 221 (393)
Q Consensus 148 ~------~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~ 221 (393)
. .....++|+||+++ +|...+... ...+++..++.++.|++.||+|||+. +|+|+||||+||++++++.
T Consensus 80 ~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~ 154 (302)
T cd07864 80 DALDFKKDKGAFYLVFEYMDH-DLMGLLESG-LVHFSEDHIKSFMKQLLEGLNYCHKK---NFLHRDIKCSNILLNNKGQ 154 (302)
T ss_pred hhhhccccCCcEEEEEcccCc-cHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCc
Confidence 1 11256999999976 777776443 34689999999999999999999998 9999999999999999999
Q ss_pred eEEeeccCCccCCCCCCccccccccccCCccCcccccc-CCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHH
Q 035862 222 PKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIET-GHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWV 300 (393)
Q Consensus 222 ~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~ 300 (393)
+||+|||++......... ......++..|+|||.+.+ ..++.++|||||||++|+|++|++||...............
T Consensus 155 ~kl~dfg~~~~~~~~~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~ 233 (302)
T cd07864 155 IKLADFGLARLYNSEESR-PYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRL 233 (302)
T ss_pred EEeCcccccccccCCccc-ccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHH
Confidence 999999998765433221 1122356778999998864 45788999999999999999999999765443222221111
Q ss_pred hhcCcCC--ccccc---c--------cCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 035862 301 KQFPADG--KKFSM---M--------IDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLK 356 (393)
Q Consensus 301 ~~~~~~~--~~~~~---~--------~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~ 356 (393)
...+... ..+.. . ........ ...++..+.+++.+||+.||.+||++.+++.+.|
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~ 301 (302)
T cd07864 234 CGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREE-FSFIPTPALDLLDHMLTLDPSKRCTAEEALNSPW 301 (302)
T ss_pred hCCCChhhcccccccccccccccccccccchhhh-cCCCCHHHHHHHHHHccCChhhCCCHHHHhcCCC
Confidence 1111100 00000 0 00000000 1124678999999999999999999999998754
No 350
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=1.5e-37 Score=284.02 Aligned_cols=269 Identities=25% Similarity=0.366 Sum_probs=198.9
Q ss_pred CcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCc--ccHHHHHHHHHHhhcC---CCCccceeeeeeecCCc
Q 035862 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL--QGHKQWLAEVQFLGVV---SHPNLVKLLGYCSTEDE 148 (393)
Q Consensus 74 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l---~h~niv~~~~~~~~~~~ 148 (393)
|++.+.||+|+||.||+|.+..+ +..|++|.+..... .....+.+|+.+++.+ +|||++++++++...+.
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~-----~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~ 75 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNT-----GRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRT 75 (287)
T ss_pred CeEEEEecccCceEEEEEEECCC-----CCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccC
Confidence 67788999999999999997542 34699999874322 1223455677766655 69999999999987653
Q ss_pred -ccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeec
Q 035862 149 -RGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDF 227 (393)
Q Consensus 149 -~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Df 227 (393)
.....+++|||+.+ +|.+++.......+++..++.++.|++.||.|||+. +++|+||+|+||+++.++.+||+||
T Consensus 76 ~~~~~~~l~~e~~~~-~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~---~i~h~~l~~~nili~~~~~~~l~df 151 (287)
T cd07838 76 DRELKLTLVFEHVDQ-DLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSH---RIVHRDLKPQNILVTSDGQVKIADF 151 (287)
T ss_pred CCCceeEEEehhccc-CHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhEEEccCCCEEEecc
Confidence 22246999999964 899988655555689999999999999999999998 9999999999999999999999999
Q ss_pred cCCccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcCC
Q 035862 228 GLAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADG 307 (393)
Q Consensus 228 g~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 307 (393)
|++........ .....++..|+|||.+.+..++.++|+|||||++|+|++|.+||........ ............
T Consensus 152 g~~~~~~~~~~---~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 226 (287)
T cd07838 152 GLARIYSFEMA---LTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQ--LDKIFDVIGLPS 226 (287)
T ss_pred CcceeccCCcc---cccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHH--HHHHHHHcCCCC
Confidence 99876533321 1234578899999999988999999999999999999999999976543221 111111110000
Q ss_pred cc-c-------ccccCccc---ccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 035862 308 KK-F-------SMMIDPRL---RNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLK 356 (393)
Q Consensus 308 ~~-~-------~~~~~~~~---~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~ 356 (393)
.. + ........ ........+..+.+++.+||+.||.+||++.+++.|.|
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~~~ 286 (287)
T cd07838 227 EEEWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQHPY 286 (287)
T ss_pred hHhcCCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcCcC
Confidence 00 0 00000000 01112245678899999999999999999999998754
No 351
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=100.00 E-value=2.1e-38 Score=288.50 Aligned_cols=253 Identities=25% Similarity=0.383 Sum_probs=202.2
Q ss_pred cCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCc---ccHHHHHHHHHHhhcCC-CCccceeeeeeecCC
Q 035862 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL---QGHKQWLAEVQFLGVVS-HPNLVKLLGYCSTED 147 (393)
Q Consensus 72 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~ 147 (393)
++|.+.+.||.|+||.||+|.... .+..|++|++..... .....+.+|+.+++.++ ||||+++++++...+
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~-----~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~ 75 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKE-----TNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEE 75 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcC-----CCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCc
Confidence 468999999999999999998754 334699998875321 22356778999999999 999999999887665
Q ss_pred cccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeec
Q 035862 148 ERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDF 227 (393)
Q Consensus 148 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Df 227 (393)
..++||||+.+++|.+++.. ...+++..++.++.|++.||.+||+. +++|+||+|+||+++.++.++|+||
T Consensus 76 ----~~~lv~e~~~~~~L~~~l~~--~~~l~~~~~~~i~~ql~~~l~~Lh~~---~~~H~dl~~~ni~i~~~~~~~l~df 146 (280)
T cd05581 76 ----NLYFVLEYAPNGELLQYIRK--YGSLDEKCTRFYAAEILLALEYLHSK---GIIHRDLKPENILLDKDMHIKITDF 146 (280)
T ss_pred ----eEEEEEcCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEecCC
Confidence 55999999999999999954 34689999999999999999999998 9999999999999999999999999
Q ss_pred cCCccCCCCCCc------------------cccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCC
Q 035862 228 GLAREGPTGDHT------------------HVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNR 289 (393)
Q Consensus 228 g~a~~~~~~~~~------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~ 289 (393)
|++......... .......++..|+|||.+.+..++.++|+||||++++++++|..||....
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~ 226 (280)
T cd05581 147 GTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSN 226 (280)
T ss_pred ccccccCCccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCcc
Confidence 998765432211 12234467889999999988889999999999999999999999998654
Q ss_pred chhhhHHHHHHhhcCcCCcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCH----HHHHHHHH
Q 035862 290 PTMEQKLLEWVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTM----NQVVESLK 356 (393)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~----~~~l~~l~ 356 (393)
.... +.. ... .....+...+..+.+|+.+||+.+|.+||++ +++++|.+
T Consensus 227 ~~~~--~~~-~~~---------------~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~~~ 279 (280)
T cd05581 227 EYLT--FQK-ILK---------------LEYSFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAHPF 279 (280)
T ss_pred HHHH--HHH-HHh---------------cCCCCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcCCC
Confidence 2211 111 100 0111122346778999999999999999999 99988754
No 352
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=3.1e-39 Score=301.60 Aligned_cols=252 Identities=21% Similarity=0.353 Sum_probs=195.9
Q ss_pred ceecccCCceEEEEEEcCCCCCCCceEEEEEEecC----CCcccHHHHHHHHHHhhcCCCCccceeeeeeecCCcccceE
Q 035862 78 LKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNN----HGLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQR 153 (393)
Q Consensus 78 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~----~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 153 (393)
.+||+|+|-+||+|.+..++ ..||--.++. .......++..|+.+|+.|+||||+++|..+.+.... ..
T Consensus 46 evLGrGafKtVYka~De~~g-----iEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~--~i 118 (632)
T KOG0584|consen 46 EVLGRGAFKTVYKAFDEEEG-----IEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNK--TI 118 (632)
T ss_pred hhcccccceeeeeccccccc-----hhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCc--ee
Confidence 46999999999999964333 3354332221 1223457789999999999999999999998877764 56
Q ss_pred EEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCC-CceEEeeccCCcc
Q 035862 154 LLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGN-FKPKLSDFGLARE 232 (393)
Q Consensus 154 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~-~~~kl~Dfg~a~~ 232 (393)
.+|+|.+..|+|..|+ .+.+.+....+..|++||++||.|||++ ..+|+|||||-+||||+.+ |.|||+|+|+|..
T Consensus 119 n~iTEL~TSGtLr~Y~--kk~~~vn~kaik~W~RQILkGL~yLHs~-~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl 195 (632)
T KOG0584|consen 119 NFITELFTSGTLREYR--KKHRRVNIKAIKSWCRQILKGLVYLHSQ-DPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATL 195 (632)
T ss_pred eeeeecccCCcHHHHH--HHhccCCHHHHHHHHHHHHHHhhhhhcC-CCCccccccccceEEEcCCcCceeecchhHHHH
Confidence 8999999999999998 4455678889999999999999999997 4599999999999999765 8999999999986
Q ss_pred CCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcCCccccc
Q 035862 233 GPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKFSM 312 (393)
Q Consensus 233 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (393)
..... ....+|||.|||||+.. ..|+..+||||||++++||.|+..||..-... .+.+......... ..+..
T Consensus 196 ~r~s~----aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~-AQIYKKV~SGiKP--~sl~k 267 (632)
T KOG0584|consen 196 LRKSH----AKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNP-AQIYKKVTSGIKP--AALSK 267 (632)
T ss_pred hhccc----cceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCH-HHHHHHHHcCCCH--HHhhc
Confidence 54332 33479999999999886 88999999999999999999999999643222 2222222111111 11111
Q ss_pred ccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHh
Q 035862 313 MIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQ 360 (393)
Q Consensus 313 ~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~~~ 360 (393)
+- .+++++||.+||.. ..+|||+.|+|++......
T Consensus 268 V~------------dPevr~fIekCl~~-~~~R~sa~eLL~d~Ff~~d 302 (632)
T KOG0584|consen 268 VK------------DPEVREFIEKCLAT-KSERLSAKELLKDPFFDED 302 (632)
T ss_pred cC------------CHHHHHHHHHHhcC-chhccCHHHHhhChhhccc
Confidence 11 36789999999999 9999999999999876654
No 353
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00 E-value=8.6e-38 Score=284.51 Aligned_cols=247 Identities=24% Similarity=0.333 Sum_probs=189.3
Q ss_pred eecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCccc---HHHHHHHH---HHhhcCCCCccceeeeeeecCCcccce
Q 035862 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQG---HKQWLAEV---QFLGVVSHPNLVKLLGYCSTEDERGIQ 152 (393)
Q Consensus 79 ~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~E~---~~l~~l~h~niv~~~~~~~~~~~~~~~ 152 (393)
.||+|+||.||+|.+..+ +..||+|.+....... ...+..|. ..++...||||+.+++.+...+ .
T Consensus 1 ~ig~g~~g~Vy~~~~~~~-----~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~----~ 71 (278)
T cd05606 1 IIGRGGFGEVYGCRKADT-----GKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPD----K 71 (278)
T ss_pred CcccCCCeEEEEEEEecC-----CCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCC----E
Confidence 489999999999986533 3469999887543221 11233343 3444567999999999888776 5
Q ss_pred EEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCCcc
Q 035862 153 RLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLARE 232 (393)
Q Consensus 153 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~ 232 (393)
.++||||+.|++|.+++. ....+++..++.++.|++.||.|||+. +++||||||+||+++.++.++|+|||++..
T Consensus 72 ~~~v~e~~~g~~L~~~l~--~~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~nili~~~~~~kl~dfg~~~~ 146 (278)
T cd05606 72 LSFILDLMNGGDLHYHLS--QHGVFSEAEMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACD 146 (278)
T ss_pred EEEEEecCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCCCCHHHEEECCCCCEEEccCcCccc
Confidence 699999999999999884 345689999999999999999999998 999999999999999999999999999875
Q ss_pred CCCCCCccccccccccCCccCccccccC-CCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcCCcccc
Q 035862 233 GPTGDHTHVSTAVVGTYGYAAPEYIETG-HLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKFS 311 (393)
Q Consensus 233 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (393)
..... .....|+..|+|||++.+. .++.++||||+||++|+|++|..||.................
T Consensus 147 ~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~--------- 213 (278)
T cd05606 147 FSKKK----PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLT--------- 213 (278)
T ss_pred cCccC----CcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHHhhc---------
Confidence 43221 2234789999999998754 689999999999999999999999976532211111110000
Q ss_pred cccCcccccccCHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHHHHHH
Q 035862 312 MMIDPRLRNQYSINAARRVAKLADNCLKKNPEERP-----TMNQVVESLKLA 358 (393)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rp-----s~~~~l~~l~~~ 358 (393)
.....+...+.++.+++.+||..+|.+|| ++.+++++.|..
T Consensus 214 ------~~~~~~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~~~~~ 259 (278)
T cd05606 214 ------MAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEHPFFR 259 (278)
T ss_pred ------cCCCCCCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhCcccc
Confidence 01112223467899999999999999999 999999987663
No 354
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00 E-value=9.1e-38 Score=281.45 Aligned_cols=246 Identities=26% Similarity=0.325 Sum_probs=188.9
Q ss_pred ceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCccc---HHHHHHHHHH-hhcCCCCccceeeeeeecCCcccceE
Q 035862 78 LKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQG---HKQWLAEVQF-LGVVSHPNLVKLLGYCSTEDERGIQR 153 (393)
Q Consensus 78 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~E~~~-l~~l~h~niv~~~~~~~~~~~~~~~~ 153 (393)
+.||.|+||.||+|.+...+ ..||+|.+....... ...+..|..+ ....+|+|++++++++...+ ..
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~-----~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~----~~ 72 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTG-----DYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKD----YL 72 (260)
T ss_pred ccCCcCCCeeEEEEEecCCC-----CeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCC----eE
Confidence 46999999999999865433 469999987543221 1223444444 44568999999999998766 56
Q ss_pred EEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCCccC
Q 035862 154 LLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREG 233 (393)
Q Consensus 154 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~ 233 (393)
++||||+++++|.+++.. ...+++..+..++.|++.||.|||+. +++|+||+|+||++++++.++|+|||++...
T Consensus 73 ~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~ 147 (260)
T cd05611 73 YLVMEYLNGGDCASLIKT--LGGLPEDWAKQYIAEVVLGVEDLHQR---GIIHRDIKPENLLIDQTGHLKLTDFGLSRNG 147 (260)
T ss_pred EEEEeccCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEeecccceec
Confidence 999999999999999843 34689999999999999999999998 9999999999999999999999999998754
Q ss_pred CCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcCCcccccc
Q 035862 234 PTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKFSMM 313 (393)
Q Consensus 234 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (393)
.. .....++..|+|||.+.+..++.++||||||+++|+|++|..||........ ........ .
T Consensus 148 ~~------~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~--~~~~~~~~-~-------- 210 (260)
T cd05611 148 LE------NKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAV--FDNILSRR-I-------- 210 (260)
T ss_pred cc------cccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHH--HHHHHhcc-c--------
Confidence 32 2234678899999999888899999999999999999999999976543221 11111100 0
Q ss_pred cCcccccccCHHHHHHHHHHHHHhcccCCCCCCC---HHHHHHHHHH
Q 035862 314 IDPRLRNQYSINAARRVAKLADNCLKKNPEERPT---MNQVVESLKL 357 (393)
Q Consensus 314 ~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps---~~~~l~~l~~ 357 (393)
.........++..+.+++.+||+.+|++||+ +.+++.|.|.
T Consensus 211 ---~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~~~~~ 254 (260)
T cd05611 211 ---NWPEEVKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIKSHPFF 254 (260)
T ss_pred ---CCCCcccccCCHHHHHHHHHHccCCHHHccCCCcHHHHHcChHh
Confidence 0011111135678999999999999999995 4788888765
No 355
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.5e-38 Score=283.71 Aligned_cols=273 Identities=25% Similarity=0.330 Sum_probs=211.4
Q ss_pred cCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcccHHHHHHHHHHhhcCC-----C---Cccceeeeee
Q 035862 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVS-----H---PNLVKLLGYC 143 (393)
Q Consensus 72 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----h---~niv~~~~~~ 143 (393)
++|.+.++||.|.|++||+|++...+ +.||+|+.+... ...+..+.|+++|++++ | .+||+|++.|
T Consensus 78 gRY~v~rKLGWGHFSTVWLawDtq~~-----r~VAlKVvKSAq-hYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~F 151 (590)
T KOG1290|consen 78 GRYHVQRKLGWGHFSTVWLAWDTQNK-----RYVALKVVKSAQ-HYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHF 151 (590)
T ss_pred ceEEEEEeccccccceeEEEeeccCC-----eEEEEEEEehhh-HHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccc
Confidence 58999999999999999999976544 469999987542 33456788999999975 2 3699999999
Q ss_pred ecCCcccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCC----
Q 035862 144 STEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGN---- 219 (393)
Q Consensus 144 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~---- 219 (393)
...+..+.+.|+|+|++ |.+|..+|.......++...+++|++|++.||.|||.. +||||.||||+|||+..+
T Consensus 152 khsGpNG~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~e--cgIIHTDlKPENvLl~~~e~~~ 228 (590)
T KOG1290|consen 152 KHSGPNGQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRE--CGIIHTDLKPENVLLCSTEIDP 228 (590)
T ss_pred eecCCCCcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHh--cCccccCCCcceeeeeccccch
Confidence 99999999999999999 88999999888888999999999999999999999987 699999999999999310
Q ss_pred --------------------------------------------------------------------------------
Q 035862 220 -------------------------------------------------------------------------------- 219 (393)
Q Consensus 220 -------------------------------------------------------------------------------- 219 (393)
T Consensus 229 ~~~~~~a~e~~~~~p~~s~s~~~t~~d~~~~~~~~~~s~~~~k~~~kk~~r~~~~~~~~l~~~~~~~~~~~~~s~n~~~~ 308 (590)
T KOG1290|consen 229 AKDAREAGEATTSLPKMSPSAVSTRPDALQRMAAEPMSKSKFKKMKKKLKRQAKKLEASLAGLEGIEEEPNQESYNNEPR 308 (590)
T ss_pred hhhhhhhccccccCCCCCcccccccccccchhhccccchhhHHHHHHHHhhhhhhhhhhhcccccccccccccccccccC
Confidence
Q ss_pred --------------------------------------------------------------------------------
Q 035862 220 -------------------------------------------------------------------------------- 219 (393)
Q Consensus 220 -------------------------------------------------------------------------------- 219 (393)
T Consensus 309 ~n~~~~~v~~~~~~~~~~~~~~~~n~~~k~~e~~~~~~~sl~~~~~~~~~t~~~~~~~s~~s~~~~~~n~~v~p~~~~~~ 388 (590)
T KOG1290|consen 309 INGNESTVERSTLEEDSNENGNRENLPIKSPENFRGNNTSLPESQLRDSATPSDGSLSSPSSPGTIASNPLVNPDIPLPE 388 (590)
T ss_pred CCccccchhhcccccccccccCCccccccCccccccccccccchhcccccccccccccCcCCccccccccccCCCCCCCc
Confidence
Q ss_pred --CceEEeeccCCccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCch----hh
Q 035862 220 --FKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPT----ME 293 (393)
Q Consensus 220 --~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~----~~ 293 (393)
-.+||+|||-|+... ...+....|..|+|||++.+..|+..+||||++|++|||+||...|++.+.. .+
T Consensus 389 ~di~vKIaDlGNACW~~-----khFT~DIQTRQYRapEVllGsgY~~~ADiWS~AC~~FELaTGDyLFePhsG~~Y~rDE 463 (590)
T KOG1290|consen 389 CDIRVKIADLGNACWVH-----KHFTEDIQTRQYRAPEVLLGSGYSTSADIWSTACMAFELATGDYLFEPHSGENYSRDE 463 (590)
T ss_pred cceeEEEeeccchhhhh-----hhhchhhhhhhccCcceeecCCCCCchhHHHHHHHHHHhhcCceeecCCCCCCCCccH
Confidence 012333333333211 1234557789999999999999999999999999999999999999765332 12
Q ss_pred ---hHHHHHHhhcCc----CCcccccccCccc-------------------ccccCHHHHHHHHHHHHHhcccCCCCCCC
Q 035862 294 ---QKLLEWVKQFPA----DGKKFSMMIDPRL-------------------RNQYSINAARRVAKLADNCLKKNPEERPT 347 (393)
Q Consensus 294 ---~~~~~~~~~~~~----~~~~~~~~~~~~~-------------------~~~~~~~~~~~l~~li~~~l~~dp~~Rps 347 (393)
+.+++++..+|. .|.--..++++.- .-.++.+...++.+|+.-||+.+|++|||
T Consensus 464 DHiA~i~ELLG~iPr~ia~~Gk~SRdFFnr~G~LrhI~~LK~WpL~~VL~eKY~~s~e~A~~fsdFL~PmLef~PeKR~t 543 (590)
T KOG1290|consen 464 DHIALIMELLGKIPRKIALGGKYSRDFFNRRGELRHIRRLKPWPLYEVLIEKYEWSEEDAQQFSDFLSPMLEFDPEKRPT 543 (590)
T ss_pred HHHHHHHHHHhhccHHHHhcCcchHhhhccccceecccccCCCcHHHHHHHHhCCCHHHHHHHHHHHHHHHhcCcccccc
Confidence 233444433332 2222222332210 11234466788999999999999999999
Q ss_pred HHHHHHHHHHH
Q 035862 348 MNQVVESLKLA 358 (393)
Q Consensus 348 ~~~~l~~l~~~ 358 (393)
+.++++|+|..
T Consensus 544 A~~cl~hPwLn 554 (590)
T KOG1290|consen 544 AAQCLKHPWLN 554 (590)
T ss_pred HHHHhcCcccc
Confidence 99999999986
No 356
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=100.00 E-value=8.8e-38 Score=285.05 Aligned_cols=267 Identities=28% Similarity=0.376 Sum_probs=197.7
Q ss_pred CcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCc-ccHHHHHHHHHHhhcCC-CCccceeeeeeecCCcccc
Q 035862 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL-QGHKQWLAEVQFLGVVS-HPNLVKLLGYCSTEDERGI 151 (393)
Q Consensus 74 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~ 151 (393)
|++.+.||.|++|+||+|.....+ ..|++|.+..... .......+|+..++.++ |||++++++++...+
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~-----~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~---- 71 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETG-----ELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFREND---- 71 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCC-----cEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCC----
Confidence 677889999999999999975433 4599998865432 12233457899999999 999999999988755
Q ss_pred eEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCCc
Q 035862 152 QRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAR 231 (393)
Q Consensus 152 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~ 231 (393)
..++||||+ +++|.+++.......+++..+..++.|++.+|.|||++ +++|+||+|+||++++++.++|+|||++.
T Consensus 72 ~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~dl~~~ni~i~~~~~~~l~d~~~~~ 147 (283)
T cd07830 72 ELYFVFEYM-EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKH---GFFHRDLKPENLLVSGPEVVKIADFGLAR 147 (283)
T ss_pred cEEEEEecC-CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCCEEEeecccce
Confidence 569999999 78999988655545789999999999999999999998 99999999999999999999999999987
Q ss_pred cCCCCCCccccccccccCCccCccccc-cCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhH-HHHHHhhcCcCC--
Q 035862 232 EGPTGDHTHVSTAVVGTYGYAAPEYIE-TGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQK-LLEWVKQFPADG-- 307 (393)
Q Consensus 232 ~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~-~~~~~~~~~~~~-- 307 (393)
...... ......++..|+|||.+. +..++.++|+||||+++|+|++|++||.......... ............
T Consensus 148 ~~~~~~---~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (283)
T cd07830 148 EIRSRP---PYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWP 224 (283)
T ss_pred eccCCC---CcCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhh
Confidence 643322 123456788999999874 4567899999999999999999999997654432211 111111000000
Q ss_pred --c----ccccccCcccc---cccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 035862 308 --K----KFSMMIDPRLR---NQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLK 356 (393)
Q Consensus 308 --~----~~~~~~~~~~~---~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~ 356 (393)
. .....+..... .......+.++.+++.+||+.+|++||++.+++.+.|
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~~~ 282 (283)
T cd07830 225 EGYKLASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQHPY 282 (283)
T ss_pred hHhhhhccccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhCCC
Confidence 0 00000000000 0000112477999999999999999999999998754
No 357
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=3e-39 Score=294.98 Aligned_cols=249 Identities=27% Similarity=0.385 Sum_probs=206.8
Q ss_pred cceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCC--cccHHHHHHHHHHhhcCCCCccceeeeeeecCCcccceEE
Q 035862 77 MLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG--LQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQRL 154 (393)
Q Consensus 77 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 154 (393)
.+.||.|.||+||-|.++.++.. ||||++.+.. .....++.+|+.||..+.||.||.+.-.|.+.+ ..+
T Consensus 569 devLGSGQFG~VYgg~hRktGrd-----VAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~e----rvF 639 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRD-----VAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPE----RVF 639 (888)
T ss_pred HhhccCCcceeeecceecccCce-----eeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCc----eEE
Confidence 46799999999999998766654 9999997642 233467889999999999999999999998888 459
Q ss_pred EEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCC---CceEEeeccCCc
Q 035862 155 LVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGN---FKPKLSDFGLAR 231 (393)
Q Consensus 155 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~---~~~kl~Dfg~a~ 231 (393)
.|||-+ .|++.++|-+.+.+.+++.....++.||+.||.|||.+ +|+|.||||+|||+.+. -++||||||+|+
T Consensus 640 VVMEKl-~GDMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~k---nIvHCDLKPENVLLas~~~FPQvKlCDFGfAR 715 (888)
T KOG4236|consen 640 VVMEKL-HGDMLEMILSSEKGRLPERITKFLVTQILVALRYLHFK---NIVHCDLKPENVLLASASPFPQVKLCDFGFAR 715 (888)
T ss_pred EEehhh-cchHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhc---ceeeccCCchheeeccCCCCCceeecccccee
Confidence 999999 55888888788888999999999999999999999998 99999999999999655 469999999999
Q ss_pred cCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcCCcccc
Q 035862 232 EGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKFS 311 (393)
Q Consensus 232 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (393)
...... .....+|||.|+|||++..+.|...-|+||+|||+|.-++|..||....+-.++ +.....-+|.+..
T Consensus 716 iIgEks---FRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEdIndQ-IQNAaFMyPp~PW--- 788 (888)
T KOG4236|consen 716 IIGEKS---FRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDINDQ-IQNAAFMYPPNPW--- 788 (888)
T ss_pred ecchhh---hhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccchhHH-hhccccccCCCch---
Confidence 876544 346789999999999999999999999999999999999999999754332222 1111111222211
Q ss_pred cccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 035862 312 MMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKL 357 (393)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~ 357 (393)
.+++..+.+||..+|+..-++|-|+...+.|.|.
T Consensus 789 ------------~eis~~AidlIn~LLqVkm~kRysvdk~lsh~Wl 822 (888)
T KOG4236|consen 789 ------------SEISPEAIDLINNLLQVKMRKRYSVDKSLSHPWL 822 (888)
T ss_pred ------------hhcCHHHHHHHHHHHHHHHHHhcchHhhccchhh
Confidence 1567889999999999999999999999999875
No 358
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=7.2e-38 Score=282.44 Aligned_cols=248 Identities=26% Similarity=0.372 Sum_probs=195.0
Q ss_pred ecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCc---ccHHHHHHHHHHhhcCCCCccceeeeeeecCCcccceEEEE
Q 035862 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL---QGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLV 156 (393)
Q Consensus 80 lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv 156 (393)
||.|+||.||++.+..++ ..+++|.+..... .....+.+|+.+++.++||||+++++.+.... ..+++
T Consensus 1 lg~g~~~~vy~~~~~~~~-----~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~----~~~lv 71 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTG-----DIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKK----NLYLV 71 (265)
T ss_pred CCCCCceEEEEEEECCCC-----CEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCc----EEEEE
Confidence 689999999999975433 4699999876533 33456788999999999999999999887655 56999
Q ss_pred EeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCCccCCCC
Q 035862 157 YEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTG 236 (393)
Q Consensus 157 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~ 236 (393)
|||+.+++|.+++... ..+++..++.++.|++.||.|||+. +++|+||+|+||++++++.++|+|||++......
T Consensus 72 ~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~ 146 (265)
T cd05579 72 MEYLPGGDLASLLENV--GSLDEDVARIYIAEIVLALEYLHSN---GIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVR 146 (265)
T ss_pred EecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHc---CeecCCCCHHHeEEcCCCCEEEEecccchhcccC
Confidence 9999999999998543 3689999999999999999999998 9999999999999999999999999998754332
Q ss_pred CC------ccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcCCccc
Q 035862 237 DH------THVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKF 310 (393)
Q Consensus 237 ~~------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (393)
.. ........++..|+|||.+....++.++||||||+++|+|++|..||......... .. ......
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~--~~-~~~~~~----- 218 (265)
T cd05579 147 RQINLNDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIF--QN-ILNGKI----- 218 (265)
T ss_pred cccccccccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHH--HH-HhcCCc-----
Confidence 21 11223456788999999998888999999999999999999999999765432211 11 110000
Q ss_pred ccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCH---HHHHHHHHH
Q 035862 311 SMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTM---NQVVESLKL 357 (393)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~---~~~l~~l~~ 357 (393)
........+..+.+|+.+||+.+|.+|||+ .+++++.|.
T Consensus 219 --------~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~~~~~ 260 (265)
T cd05579 219 --------EWPEDVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKNHPFF 260 (265)
T ss_pred --------CCCccccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhcCccc
Confidence 000000136788999999999999999999 887877654
No 359
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=100.00 E-value=1.1e-37 Score=292.32 Aligned_cols=277 Identities=26% Similarity=0.344 Sum_probs=203.6
Q ss_pred HHHHHHHhcCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCC--cccHHHHHHHHHHhhcCCCCccceeee
Q 035862 64 MQELREATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG--LQGHKQWLAEVQFLGVVSHPNLVKLLG 141 (393)
Q Consensus 64 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~ 141 (393)
..++....++|.+.+.||+|+||.||+|.+..+ +..||+|++.... ......+.+|+.+++.++||||+++++
T Consensus 9 ~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~-----~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~ 83 (345)
T cd07877 9 NKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKT-----GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 83 (345)
T ss_pred HHHHhhccCceEEEEEeeecCCeEEEEEEEcCC-----CeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceee
Confidence 345666779999999999999999999986433 3469999987532 122355778999999999999999999
Q ss_pred eeecCCc--ccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCC
Q 035862 142 YCSTEDE--RGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGN 219 (393)
Q Consensus 142 ~~~~~~~--~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~ 219 (393)
++..... .....+++++++ +++|.+++.. ..+++..++.++.|++.||.|||+. +++||||||+||+++++
T Consensus 84 ~~~~~~~~~~~~~~~lv~~~~-~~~L~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~ 156 (345)
T cd07877 84 VFTPARSLEEFNDVYLVTHLM-GADLNNIVKC---QKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNED 156 (345)
T ss_pred eeeecccccccccEEEEehhc-ccCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEcCC
Confidence 8864332 112357888887 7899887732 3589999999999999999999998 99999999999999999
Q ss_pred CceEEeeccCCccCCCCCCccccccccccCCccCcccccc-CCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHH
Q 035862 220 FKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIET-GHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLE 298 (393)
Q Consensus 220 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~ 298 (393)
+.+||+|||++...... .....++..|+|||.+.+ ..++.++|||||||++|+|++|+.||.............
T Consensus 157 ~~~kl~dfg~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~ 231 (345)
T cd07877 157 CELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 231 (345)
T ss_pred CCEEEeccccccccccc-----ccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 99999999998754221 233567889999998866 568899999999999999999999997654322111110
Q ss_pred HHhhcCcCCccccccc-----------Ccccc---cccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q 035862 299 WVKQFPADGKKFSMMI-----------DPRLR---NQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLA 358 (393)
Q Consensus 299 ~~~~~~~~~~~~~~~~-----------~~~~~---~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~ 358 (393)
.....+.. .....+. ..... .......+.++.+||.+||+.||.+||++.+++.|.+..
T Consensus 232 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~f~ 304 (345)
T cd07877 232 RLVGTPGA-ELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 304 (345)
T ss_pred HHhCCCCH-HHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcChhhh
Confidence 00000000 0000000 00000 000012356789999999999999999999999998755
No 360
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.3e-39 Score=289.36 Aligned_cols=270 Identities=26% Similarity=0.358 Sum_probs=208.5
Q ss_pred hcCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCC-------cccHHHHHHHHHHhhcCCCCccceeeeee
Q 035862 71 TNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG-------LQGHKQWLAEVQFLGVVSHPNLVKLLGYC 143 (393)
Q Consensus 71 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-------~~~~~~~~~E~~~l~~l~h~niv~~~~~~ 143 (393)
.++|-.+.+||+|||+.||+|.+.... +.||+|+-.-.. ....+...+|..|.+.+.||-||++|++|
T Consensus 462 n~RYLlLhLLGrGGFSEVyKAFDl~Eq-----RYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyf 536 (775)
T KOG1151|consen 462 NDRYLLLHLLGRGGFSEVYKAFDLTEQ-----RYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYF 536 (775)
T ss_pred HHHHHHHHHhccccHHHHHHhcccchh-----heeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeee
Confidence 457888999999999999999865433 458888754221 11234578999999999999999999999
Q ss_pred ecCCcccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeC---CCC
Q 035862 144 STEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLD---GNF 220 (393)
Q Consensus 144 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~---~~~ 220 (393)
..+... .|-|+|||+|.+|+-|| .....+++..++.|+.||+.||.||... ..+|+|-||||.|||+. ..|
T Consensus 537 slDtds---FCTVLEYceGNDLDFYL--KQhklmSEKEARSIiMQiVnAL~YLNEi-kpPIIHYDLKPgNILLv~GtacG 610 (775)
T KOG1151|consen 537 SLDTDS---FCTVLEYCEGNDLDFYL--KQHKLMSEKEARSIIMQIVNALKYLNEI-KPPIIHYDLKPGNILLVNGTACG 610 (775)
T ss_pred eecccc---ceeeeeecCCCchhHHH--HhhhhhhHHHHHHHHHHHHHHHHHHhcc-CCCeeeeccCCccEEEecCcccc
Confidence 876653 48899999999999999 4556789999999999999999999985 55899999999999994 458
Q ss_pred ceEEeeccCCccCCCCCCc-----cccccccccCCccCcccccc----CCCCchhhHHHHHHHHHHHHhCCCccCCCCch
Q 035862 221 KPKLSDFGLAREGPTGDHT-----HVSTAVVGTYGYAAPEYIET----GHLKSQSDIWSFGVVLYEILTGRRVLERNRPT 291 (393)
Q Consensus 221 ~~kl~Dfg~a~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~----~~~~~~~DiwslGvil~elltg~~pf~~~~~~ 291 (393)
.+||+|||++......... .......||.||++||++.- ...+.++||||+|||+|..+.|+.||..+...
T Consensus 611 eIKITDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQ 690 (775)
T KOG1151|consen 611 EIKITDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQ 690 (775)
T ss_pred eeEeeecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhH
Confidence 8999999999986554333 23456789999999998853 35688999999999999999999999876432
Q ss_pred hhhHHHHHHhhcCcCCcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhhc
Q 035862 292 MEQKLLEWVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQESE 363 (393)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~~~~~~ 363 (393)
+++.....-+... .+.-+.-+.++.++.+||++||.+--++|..+.++..+...+.....
T Consensus 691 --QdILqeNTIlkAt----------EVqFP~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~dpyllPh~rr 750 (775)
T KOG1151|consen 691 --QDILQENTILKAT----------EVQFPPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLACDPYLLPHIRR 750 (775)
T ss_pred --HHHHhhhchhcce----------eccCCCCCccCHHHHHHHHHHHHhhhhhhhhHHHHccCccccchhhh
Confidence 2222211111000 00001112456889999999999999999999999998777654433
No 361
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=100.00 E-value=1.8e-37 Score=288.87 Aligned_cols=270 Identities=26% Similarity=0.340 Sum_probs=200.9
Q ss_pred HHhcCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCC--cccHHHHHHHHHHhhcCCCCccceeeeeeecC
Q 035862 69 EATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG--LQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTE 146 (393)
Q Consensus 69 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 146 (393)
...++|++.+.||.|+||.||+|.+..++ ..|++|.+.... ......+.+|+.+++.++||||+++++++...
T Consensus 7 ~~~~~y~~~~~ig~g~~g~v~~~~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~ 81 (328)
T cd07856 7 EITNRYVDLQPVGMGAFGLVCSARDQLTG-----QNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISP 81 (328)
T ss_pred ccccceEEEEeecccCCeEEEEEEECCCC-----CEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecC
Confidence 45788999999999999999999865433 469999876432 22345677899999999999999999988654
Q ss_pred CcccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEee
Q 035862 147 DERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSD 226 (393)
Q Consensus 147 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~D 226 (393)
.. ..+++|||+ +++|.+++. ...+++..+..++.|++.||.|||+. +++||||+|.||++++++.++|+|
T Consensus 82 ~~---~~~lv~e~~-~~~L~~~~~---~~~~~~~~~~~~~~ql~~aL~~LH~~---~iiH~dl~p~Nili~~~~~~~l~d 151 (328)
T cd07856 82 LE---DIYFVTELL-GTDLHRLLT---SRPLEKQFIQYFLYQILRGLKYVHSA---GVVHRDLKPSNILINENCDLKICD 151 (328)
T ss_pred CC---cEEEEeehh-ccCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEeECCCCCEEeCc
Confidence 33 458999999 668988773 23578888899999999999999998 999999999999999999999999
Q ss_pred ccCCccCCCCCCccccccccccCCccCcccccc-CCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHH-HHHhhcC
Q 035862 227 FGLAREGPTGDHTHVSTAVVGTYGYAAPEYIET-GHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLL-EWVKQFP 304 (393)
Q Consensus 227 fg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~-~~~~~~~ 304 (393)
||++...... .....++..|+|||.+.+ ..++.++|||||||++|+|++|..||............ ......+
T Consensus 152 fg~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~ 226 (328)
T cd07856 152 FGLARIQDPQ-----MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPP 226 (328)
T ss_pred cccccccCCC-----cCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCC
Confidence 9998753221 123467889999998765 57899999999999999999999999765442221111 1110000
Q ss_pred c-------CCcccccccCcccccccC-----HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q 035862 305 A-------DGKKFSMMIDPRLRNQYS-----INAARRVAKLADNCLKKNPEERPTMNQVVESLKLA 358 (393)
Q Consensus 305 ~-------~~~~~~~~~~~~~~~~~~-----~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~ 358 (393)
. ..........-......+ ..++..+.++|.+||+.+|++||++.+++.+.|..
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~~~~~ 292 (328)
T cd07856 227 DDVINTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAHPYLA 292 (328)
T ss_pred HHHHHhccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCCccc
Confidence 0 000000000000000111 12457899999999999999999999999997764
No 362
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=100.00 E-value=1.2e-37 Score=292.04 Aligned_cols=274 Identities=25% Similarity=0.329 Sum_probs=202.9
Q ss_pred HHHHhcCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCC--cccHHHHHHHHHHhhcCCCCccceeeeeee
Q 035862 67 LREATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG--LQGHKQWLAEVQFLGVVSHPNLVKLLGYCS 144 (393)
Q Consensus 67 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~ 144 (393)
+....++|++.+.||+|+||.||+|....+ +..||+|.+.... ......+.+|+.+++.++||||+++++++.
T Consensus 10 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~ 84 (343)
T cd07880 10 IWEVPDRYRDLKQVGSGAYGTVCSALDRRT-----GAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFT 84 (343)
T ss_pred hhccccceEEEEEeeecCCeEEEEEEECCC-----CcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeec
Confidence 344567899999999999999999986533 3469999886432 122345778999999999999999999887
Q ss_pred cCCccc--ceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCce
Q 035862 145 TEDERG--IQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKP 222 (393)
Q Consensus 145 ~~~~~~--~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~ 222 (393)
...... ...++||||+ +++|.+++. ...+++..++.++.|++.||.|||+. ||+||||||+||+++.++.+
T Consensus 85 ~~~~~~~~~~~~lv~e~~-~~~l~~~~~---~~~l~~~~~~~i~~qi~~al~~LH~~---gi~H~dlkp~Nill~~~~~~ 157 (343)
T cd07880 85 PDLSLDRFHDFYLVMPFM-GTDLGKLMK---HEKLSEDRIQFLVYQMLKGLKYIHAA---GIIHRDLKPGNLAVNEDCEL 157 (343)
T ss_pred CCccccccceEEEEEecC-CCCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCE
Confidence 654321 2458999999 779988874 24589999999999999999999998 99999999999999999999
Q ss_pred EEeeccCCccCCCCCCccccccccccCCccCcccccc-CCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHh
Q 035862 223 KLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIET-GHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVK 301 (393)
Q Consensus 223 kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~ 301 (393)
+|+|||++...... .....+++.|+|||.+.+ ..++.++|+||||+++|+|++|..||........ ......
T Consensus 158 kl~dfg~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~--~~~~~~ 230 (343)
T cd07880 158 KILDFGLARQTDSE-----MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQ--LMEIMK 230 (343)
T ss_pred EEeecccccccccC-----ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHH
Confidence 99999998754322 123467889999998876 4588999999999999999999999976543211 111111
Q ss_pred hcCcCCcccccccC------------cc---cccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHH
Q 035862 302 QFPADGKKFSMMID------------PR---LRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAV 359 (393)
Q Consensus 302 ~~~~~~~~~~~~~~------------~~---~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~~ 359 (393)
........+...+. .. ........++..+.+++.+||+.||.+|||+.+++.|.+...
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~~~~~~ 303 (343)
T cd07880 231 VTGTPSKEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAHPYFEE 303 (343)
T ss_pred hcCCCCHHHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcCccHhh
Confidence 00000000000000 00 000011134567899999999999999999999999877653
No 363
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=100.00 E-value=2.3e-37 Score=285.90 Aligned_cols=253 Identities=29% Similarity=0.386 Sum_probs=197.5
Q ss_pred cCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCC---CcccHHHHHHHHHHhhcCCCCccceeeeeeecCCc
Q 035862 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNH---GLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDE 148 (393)
Q Consensus 72 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 148 (393)
+.|...+.||+|+||.||+|.+... +..+++|.+... .......+.+|+.+++.++|+|++++++++....
T Consensus 15 ~~~~~~~~lg~g~~g~v~~~~~~~~-----~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~- 88 (308)
T cd06634 15 KLFSDLREIGHGSFGAVYFARDVRN-----SEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREH- 88 (308)
T ss_pred HHHHHHHheeeCCCEEEEEEEEcCC-----CcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCC-
Confidence 3477788999999999999997533 346899987643 2223346778999999999999999999988765
Q ss_pred ccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeecc
Q 035862 149 RGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFG 228 (393)
Q Consensus 149 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg 228 (393)
..++||||+. ++|.+++.... ..+++..+..++.|++.||.|||+. +++||||+|+||+++.++.++|+|||
T Consensus 89 ---~~~lv~e~~~-~~l~~~~~~~~-~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~kl~dfg 160 (308)
T cd06634 89 ---TAWLVMEYCL-GSASDLLEVHK-KPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFG 160 (308)
T ss_pred ---eeEEEEEccC-CCHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHhEEECCCCcEEECCcc
Confidence 4599999996 58887765433 4578999999999999999999998 99999999999999999999999999
Q ss_pred CCccCCCCCCccccccccccCCccCccccc---cCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCc
Q 035862 229 LAREGPTGDHTHVSTAVVGTYGYAAPEYIE---TGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPA 305 (393)
Q Consensus 229 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~ 305 (393)
++...... ....++..|+|||.+. ...++.++|||||||++|+|++|..||......... .......
T Consensus 161 ~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~--~~~~~~~-- 230 (308)
T cd06634 161 SASIMAPA------NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSAL--YHIAQNE-- 230 (308)
T ss_pred cceeecCc------ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHH--HHHhhcC--
Confidence 98754322 2346788999999874 356788999999999999999999998654322111 1111100
Q ss_pred CCcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHh
Q 035862 306 DGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQ 360 (393)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~~~ 360 (393)
.........+..+.+||.+||..+|++||++.+++++.+....
T Consensus 231 ------------~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~~~~~ 273 (308)
T cd06634 231 ------------SPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRE 273 (308)
T ss_pred ------------CCCcCcccccHHHHHHHHHHhhCCcccCCCHHHHhhCcccccc
Confidence 0001112356778999999999999999999999999887763
No 364
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00 E-value=1.9e-37 Score=290.58 Aligned_cols=267 Identities=26% Similarity=0.373 Sum_probs=197.1
Q ss_pred hcCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCC--cccHHHHHHHHHHhhcCCCCccceeeeeeecCCc
Q 035862 71 TNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG--LQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDE 148 (393)
Q Consensus 71 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 148 (393)
.++|.+...||+|+||.||+|.+..+ +..||+|.+.... ......+.+|+.+++.++||||+++++++.....
T Consensus 14 ~~~y~~~~~ig~g~~g~v~~~~~~~~-----~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 88 (342)
T cd07879 14 PERYTSLKQVGSGAYGSVCSAIDKRT-----GEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVS 88 (342)
T ss_pred ccceEEEEEeeecCCeEEEEEEeCCC-----CcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheeccccc
Confidence 47899999999999999999986533 3469999886532 2223457789999999999999999998865432
Q ss_pred c--cceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEee
Q 035862 149 R--GIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSD 226 (393)
Q Consensus 149 ~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~D 226 (393)
. ....++|+||+. .+|..++ ...+++..+..++.|++.||.|||+. +++||||||+||+++.++.+||+|
T Consensus 89 ~~~~~~~~lv~e~~~-~~l~~~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dlkp~NIll~~~~~~kL~d 160 (342)
T cd07879 89 GDEFQDFYLVMPYMQ-TDLQKIM----GHPLSEDKVQYLVYQMLCGLKYIHSA---GIIHRDLKPGNLAVNEDCELKILD 160 (342)
T ss_pred CCCCceEEEEecccc-cCHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEee
Confidence 1 124589999995 4777655 23588999999999999999999998 999999999999999999999999
Q ss_pred ccCCccCCCCCCccccccccccCCccCcccccc-CCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCc
Q 035862 227 FGLAREGPTGDHTHVSTAVVGTYGYAAPEYIET-GHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPA 305 (393)
Q Consensus 227 fg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~ 305 (393)
||++...... .....++..|+|||.+.+ ..++.++|||||||++|||++|+.||........ +.........
T Consensus 161 fg~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~--~~~~~~~~~~ 233 (342)
T cd07879 161 FGLARHADAE-----MTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQ--LTQILKVTGV 233 (342)
T ss_pred CCCCcCCCCC-----CCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHHhcCC
Confidence 9998754321 123467889999998866 4688999999999999999999999986543221 1111111111
Q ss_pred CCcccccccC-----------cc-ccccc---CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 035862 306 DGKKFSMMID-----------PR-LRNQY---SINAARRVAKLADNCLKKNPEERPTMNQVVESLKL 357 (393)
Q Consensus 306 ~~~~~~~~~~-----------~~-~~~~~---~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~ 357 (393)
.+..+..... +. .+... ....+..+.+|+.+||+.||.+||++.+++.|.+.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f 300 (342)
T cd07879 234 PGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYF 300 (342)
T ss_pred CCHHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcch
Confidence 1000000000 00 00000 01245678899999999999999999999998554
No 365
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00 E-value=2.8e-37 Score=283.68 Aligned_cols=258 Identities=27% Similarity=0.420 Sum_probs=195.6
Q ss_pred hcCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCc-ccHHHHHHHHHHhhcCC-CCccceeeeeeecCCc
Q 035862 71 TNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL-QGHKQWLAEVQFLGVVS-HPNLVKLLGYCSTEDE 148 (393)
Q Consensus 71 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~ 148 (393)
.++|++.+.||.|+||.||+|.+..+ +..||+|.+..... .....+..|+.++.... ||||+++++++....
T Consensus 14 ~~~~~~~~~lg~g~~~~v~~~~~~~~-----~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~- 87 (296)
T cd06618 14 LNDLENLGEIGSGTCGQVYKMRFKKT-----GHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDS- 87 (296)
T ss_pred cchheeeeEeeccCCeEEEEEEECCC-----CeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCC-
Confidence 35789999999999999999997533 34699999875432 23345566777666665 999999999998766
Q ss_pred ccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhc-CCCCCeEeccCCCCCeEeCCCCceEEeec
Q 035862 149 RGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHE-GLEIQVIYRDFKTSNVLLDGNFKPKLSDF 227 (393)
Q Consensus 149 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~-~~~~~ivH~Dikp~NIll~~~~~~kl~Df 227 (393)
..+++|||+. ++|.+++... ...+++..+..++.|++.||+|||+ . +++||||+|+||++++++.+||+||
T Consensus 88 ---~~~~v~e~~~-~~l~~l~~~~-~~~l~~~~~~~i~~~i~~~l~~lH~~~---~i~H~dl~p~nill~~~~~~kL~df 159 (296)
T cd06618 88 ---DVFICMELMS-TCLDKLLKRI-QGPIPEDILGKMTVAIVKALHYLKEKH---GVIHRDVKPSNILLDASGNVKLCDF 159 (296)
T ss_pred ---eEEEEeeccC-cCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhhC---CEecCCCcHHHEEEcCCCCEEECcc
Confidence 5699999984 5777766443 3468999999999999999999996 5 8999999999999999999999999
Q ss_pred cCCccCCCCCCccccccccccCCccCccccccCC----CCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhc
Q 035862 228 GLAREGPTGDHTHVSTAVVGTYGYAAPEYIETGH----LKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQF 303 (393)
Q Consensus 228 g~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~ 303 (393)
|++........ .....++..|+|||.+.+.. ++.++||||||+++|+|++|+.||.......+ .+......
T Consensus 160 g~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~-~~~~~~~~- 234 (296)
T cd06618 160 GISGRLVDSKA---KTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFE-VLTKILQE- 234 (296)
T ss_pred ccchhccCCCc---ccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHH-HHHHHhcC-
Confidence 99876433221 12335778999999987553 78899999999999999999999975332211 11111111
Q ss_pred CcCCcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHH
Q 035862 304 PADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAV 359 (393)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~~ 359 (393)
.... . .....++.++.+|+.+||..||.+||++.+++.+.|...
T Consensus 235 --~~~~--------~--~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~ 278 (296)
T cd06618 235 --EPPS--------L--PPNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQHPFIRR 278 (296)
T ss_pred --CCCC--------C--CCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcChhhhc
Confidence 0000 0 000124577899999999999999999999999987553
No 366
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=100.00 E-value=2e-37 Score=279.19 Aligned_cols=252 Identities=25% Similarity=0.368 Sum_probs=194.3
Q ss_pred CCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecC---C--CcccHHHHHHHHHHhhcCCCCccceeeeeeecCC
Q 035862 73 GFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNN---H--GLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTED 147 (393)
Q Consensus 73 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~---~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 147 (393)
+|.+.+.||+|+||.||++.+..... .+++|.+.. . .......+..|+.+++.++||||+++++++....
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 75 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVA-----EERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERD 75 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCC-----cceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCC
Confidence 48888999999999999998754322 144444332 1 1122345667899999999999999999987665
Q ss_pred cccceEEEEEeecCCCChHHHHhh--cCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEe
Q 035862 148 ERGIQRLLVYEYMPNRSLEDRLFS--RAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLS 225 (393)
Q Consensus 148 ~~~~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~ 225 (393)
..++||||+.+++|.+++.. .....+++..++.++.|++.||.|||+. |++|+||+|+||++++ +.++|+
T Consensus 76 ----~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~~l~~~nili~~-~~~~l~ 147 (260)
T cd08222 76 ----AFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQR---RILHRDLKAKNIFLKN-NLLKIG 147 (260)
T ss_pred ----ceEEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHc---CccccCCChhheEeec-CCEeec
Confidence 45999999999999998854 2345689999999999999999999998 9999999999999975 669999
Q ss_pred eccCCccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCc
Q 035862 226 DFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPA 305 (393)
Q Consensus 226 Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~ 305 (393)
|||++........ ......|+..|+|||.+.+..++.++|+||||+++|+|++|..||........ .......
T Consensus 148 d~g~~~~~~~~~~--~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~~--~~~~~~~--- 220 (260)
T cd08222 148 DFGVSRLLMGSCD--LATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSV--VLRIVEG--- 220 (260)
T ss_pred ccCceeecCCCcc--cccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHH--HHHHHcC---
Confidence 9999876433221 22345678899999999888899999999999999999999999965432111 1111100
Q ss_pred CCcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 035862 306 DGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLK 356 (393)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~ 356 (393)
.....+..++.++.+++.+||+.+|++||++.++++|.|
T Consensus 221 ------------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~ 259 (260)
T cd08222 221 ------------PTPSLPETYSRQLNSIMQSMLNKDPSLRPSAAEILRNPF 259 (260)
T ss_pred ------------CCCCCcchhcHHHHHHHHHHhcCChhhCcCHHHHhhCCC
Confidence 011122345678999999999999999999999999864
No 367
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=100.00 E-value=3e-37 Score=281.31 Aligned_cols=266 Identities=28% Similarity=0.395 Sum_probs=199.2
Q ss_pred CcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCC--cccHHHHHHHHHHhhcCCCCccceeeeeeecCCcccc
Q 035862 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG--LQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGI 151 (393)
Q Consensus 74 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 151 (393)
|+....||+|++|.||+|....+ +..+++|.+.... ......+..|+.+++.++|+|++++++++...+
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~-----~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~---- 71 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKT-----GEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTER---- 71 (282)
T ss_pred CeeehcccccCcceEEEeeecCC-----CcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCC----
Confidence 56678899999999999986543 3469999987653 233456778999999999999999999988765
Q ss_pred eEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCCc
Q 035862 152 QRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAR 231 (393)
Q Consensus 152 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~ 231 (393)
..++||||+. ++|.+++.... ..+++..++.++.|++.||.|||+. +++||||+|+||++++++.++|+|||++.
T Consensus 72 ~~~~v~e~~~-~~l~~~i~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~~l~~~ni~~~~~~~~~l~d~g~~~ 146 (282)
T cd07829 72 KLYLVFEYCD-MDLKKYLDKRP-GPLSPNLIKSIMYQLLRGLAYCHSH---RILHRDLKPQNILINRDGVLKLADFGLAR 146 (282)
T ss_pred ceEEEecCcC-cCHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChheEEEcCCCCEEEecCCccc
Confidence 5699999997 59999986443 4689999999999999999999998 99999999999999999999999999987
Q ss_pred cCCCCCCccccccccccCCccCccccccC-CCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhH-HHHHHhh-------
Q 035862 232 EGPTGDHTHVSTAVVGTYGYAAPEYIETG-HLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQK-LLEWVKQ------- 302 (393)
Q Consensus 232 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~-~~~~~~~------- 302 (393)
....... ......++..|+|||.+.+. .++.++|||||||++|||++|..||.......... .......
T Consensus 147 ~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (282)
T cd07829 147 AFGIPLR--TYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWP 224 (282)
T ss_pred ccCCCcc--ccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHH
Confidence 6543221 12234567789999998766 78999999999999999999999997654322111 1111000
Q ss_pred ----cCcCCcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 035862 303 ----FPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLK 356 (393)
Q Consensus 303 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~ 356 (393)
.+.....+.......... .....+..+.+++.+||..||++||++.+++.+.|
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~p~ 281 (282)
T cd07829 225 GVTKLPDYKPTFPKFPPKDLEK-VLPRLDPEGIDLLSKMLQYNPAKRISAKEALKHPY 281 (282)
T ss_pred hhcccccccccccccCccchHH-hcccccHHHHHHHHHhhccCcccCCCHHHHhhCcC
Confidence 000000000000000000 11123678999999999999999999999999865
No 368
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=7e-38 Score=283.18 Aligned_cols=280 Identities=26% Similarity=0.390 Sum_probs=206.1
Q ss_pred cCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcccHHHHHHHHHHhhc--CCCCccceeeeeeecCCcc
Q 035862 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGV--VSHPNLVKLLGYCSTEDER 149 (393)
Q Consensus 72 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~~~~~~~~~~~~ 149 (393)
...+.+.+||+|.||.||+|.+.. ..||||++.. .....+.+|-.|.+. ++|+||++|++.-...+..
T Consensus 210 ~pl~l~eli~~Grfg~V~KaqL~~-------~~VAVKifp~---~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~ 279 (534)
T KOG3653|consen 210 DPLQLLELIGRGRFGCVWKAQLDN-------RLVAVKIFPE---QEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTAD 279 (534)
T ss_pred CchhhHHHhhcCccceeehhhccC-------ceeEEEecCH---HHHHHHHhHHHHHhccCccchhHHHhhchhccCCcc
Confidence 345566789999999999998753 3599999965 344567778777776 5799999999887666644
Q ss_pred cceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCC------CCCeEeccCCCCCeEeCCCCceE
Q 035862 150 GIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGL------EIQVIYRDFKTSNVLLDGNFKPK 223 (393)
Q Consensus 150 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~------~~~ivH~Dikp~NIll~~~~~~k 223 (393)
....+||++|.+.|+|.+||.. ..++|.....++..+++||+|||... ..+|+|||||..||||..|++..
T Consensus 280 ~~eywLVt~fh~kGsL~dyL~~---ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTcc 356 (534)
T KOG3653|consen 280 RMEYWLVTEFHPKGSLCDYLKA---NTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCC 356 (534)
T ss_pred ccceeEEeeeccCCcHHHHHHh---ccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEE
Confidence 5577999999999999999943 46899999999999999999999763 35799999999999999999999
Q ss_pred EeeccCCccCCCCCCccccccccccCCccCccccccCC-CC-----chhhHHHHHHHHHHHHhCCCccCC-CCchhhhHH
Q 035862 224 LSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIETGH-LK-----SQSDIWSFGVVLYEILTGRRVLER-NRPTMEQKL 296 (393)
Q Consensus 224 l~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~-----~~~DiwslGvil~elltg~~pf~~-~~~~~~~~~ 296 (393)
|+|||+|..+..+......-..+||.+|||||++.+.. +. .+.||||+|.+||||++...-+.. ..+..+.-+
T Consensus 357 IaDFGLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpf 436 (534)
T KOG3653|consen 357 IADFGLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPF 436 (534)
T ss_pred eeccceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCch
Confidence 99999998876554443444579999999999997642 22 368999999999999998766642 112111111
Q ss_pred HHHHhhcCcCCcccccccCcccccccCH-----HHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhhcC
Q 035862 297 LEWVKQFPADGKKFSMMIDPRLRNQYSI-----NAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQESEQ 364 (393)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~~~~~~~ 364 (393)
...+..-|.-+.--...+.+..++..+. ....-+.+.+..||+.||+.|.|+.=+.+.++.+..-.+.
T Consensus 437 e~evG~hPt~e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~~~~~ 509 (534)
T KOG3653|consen 437 EAEVGNHPTLEEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAELMMLWED 509 (534)
T ss_pred hHHhcCCCCHHHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhccCCc
Confidence 1111111111110011112222222222 2345688999999999999999999999999888765543
No 369
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=9e-37 Score=322.72 Aligned_cols=266 Identities=29% Similarity=0.493 Sum_probs=203.0
Q ss_pred HHHhcCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcccHHHHHHHHHHhhcCCCCccceeeeeeecCC
Q 035862 68 REATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTED 147 (393)
Q Consensus 68 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 147 (393)
+.....|.....||+|+||.||+|.+... +..||+|.+...... ...|++++++++||||+++++++...+
T Consensus 686 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~-----~~~vavK~~~~~~~~----~~~~~~~l~~l~HpnIv~~~~~~~~~~ 756 (968)
T PLN00113 686 NDILSSLKEENVISRGKKGASYKGKSIKN-----GMQFVVKEINDVNSI----PSSEIADMGKLQHPNIVKLIGLCRSEK 756 (968)
T ss_pred HHHHhhCCcccEEccCCCeeEEEEEECCC-----CcEEEEEEccCCccc----cHHHHHHHhhCCCCCcceEEEEEEcCC
Confidence 34456688889999999999999986433 346999988654321 234688999999999999999998776
Q ss_pred cccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeec
Q 035862 148 ERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDF 227 (393)
Q Consensus 148 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Df 227 (393)
. .++||||+++|+|.+++. .+++..+..++.|++.||+|||..+..+|+||||||+||+++.++..++. |
T Consensus 757 ~----~~lv~Ey~~~g~L~~~l~-----~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~ 826 (968)
T PLN00113 757 G----AYLIHEYIEGKNLSEVLR-----NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-L 826 (968)
T ss_pred C----CEEEEeCCCCCcHHHHHh-----cCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-e
Confidence 3 499999999999999983 37899999999999999999995444499999999999999999888875 6
Q ss_pred cCCccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcCC
Q 035862 228 GLAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADG 307 (393)
Q Consensus 228 g~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 307 (393)
|....... .....+++.|+|||++.+..++.++|||||||++|||+||+.||...... ......|..... ..
T Consensus 827 ~~~~~~~~------~~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~-~~~~~~~~~~~~-~~ 898 (968)
T PLN00113 827 SLPGLLCT------DTKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGV-HGSIVEWARYCY-SD 898 (968)
T ss_pred cccccccc------CCCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCC-CCcHHHHHHHhc-Cc
Confidence 65543211 12336789999999999999999999999999999999999999543221 122333333221 11
Q ss_pred cccccccCccccc--ccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHh
Q 035862 308 KKFSMMIDPRLRN--QYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQ 360 (393)
Q Consensus 308 ~~~~~~~~~~~~~--~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~~~ 360 (393)
.....++++.+.. ........++.+++.+||+.||++||++.++++.|+.+.+
T Consensus 899 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~ 953 (968)
T PLN00113 899 CHLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESASR 953 (968)
T ss_pred cchhheeCccccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhhc
Confidence 2223334443322 2233455678899999999999999999999999998865
No 370
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=100.00 E-value=1.1e-36 Score=282.02 Aligned_cols=249 Identities=31% Similarity=0.440 Sum_probs=194.4
Q ss_pred CcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCc---ccHHHHHHHHHHhhcCCCCccceeeeeeecCCccc
Q 035862 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL---QGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERG 150 (393)
Q Consensus 74 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 150 (393)
|.....||+|+||.||+|++..+ +..|++|.+..... .....+.+|+.+++.++|||++++++++...+
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~-----~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--- 94 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHT-----NEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEH--- 94 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCC-----CcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCC---
Confidence 67778899999999999986433 34699998865422 22345778999999999999999999998776
Q ss_pred ceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCC
Q 035862 151 IQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLA 230 (393)
Q Consensus 151 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a 230 (393)
..++||||+. ++|.+++... ...+++..++.++.|++.||.|||+. |++|+||+|+||++++++.+||+|||++
T Consensus 95 -~~~lv~e~~~-~~l~~~l~~~-~~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dl~p~nili~~~~~~kL~dfg~~ 168 (313)
T cd06633 95 -TAWLVMEYCL-GSASDLLEVH-KKPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADFGSA 168 (313)
T ss_pred -EEEEEEecCC-CCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChhhEEECCCCCEEEeecCCC
Confidence 5599999995 5787777543 34588999999999999999999998 9999999999999999999999999988
Q ss_pred ccCCCCCCccccccccccCCccCccccc---cCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcCC
Q 035862 231 REGPTGDHTHVSTAVVGTYGYAAPEYIE---TGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADG 307 (393)
Q Consensus 231 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 307 (393)
..... .....|+..|+|||++. ...++.++|||||||++|+|++|..||............ ... ..
T Consensus 169 ~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~~~--~~~-~~-- 237 (313)
T cd06633 169 SKSSP------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHI--AQN-DS-- 237 (313)
T ss_pred cccCC------CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHH--Hhc-CC--
Confidence 64322 12356888999999984 456888999999999999999999998765432211111 000 00
Q ss_pred cccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q 035862 308 KKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLA 358 (393)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~ 358 (393)
........+..+.+|+.+||+.+|.+||++.+++.+.+..
T Consensus 238 -----------~~~~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~~~~~ 277 (313)
T cd06633 238 -----------PTLQSNEWTDSFRGFVDYCLQKIPQERPASAELLRHDFVR 277 (313)
T ss_pred -----------CCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCcccC
Confidence 0001112346789999999999999999999999986643
No 371
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.5e-38 Score=293.49 Aligned_cols=245 Identities=25% Similarity=0.350 Sum_probs=198.8
Q ss_pred HhcCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcccHHHHHHHHHHhhcC-CCCccceeeeeeecCCc
Q 035862 70 ATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVV-SHPNLVKLLGYCSTEDE 148 (393)
Q Consensus 70 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~ 148 (393)
++..|.....+|.|+|+.|-.+.+..++. ..++|++.+...+ ..+|+.++... +||||+++.+++....
T Consensus 320 ~~~~y~~~~~~~~gs~s~~~~~~~~~t~~-----~~~vkii~~~~~~----~~~e~~~~~~~~~h~niv~~~~v~~~~~- 389 (612)
T KOG0603|consen 320 FTESYEFREELGEGSFSAVKYCESSPTDQ-----EPAVKIISKRADD----NQDEIPISLLVRDHPNIVKSHDVYEDGK- 389 (612)
T ss_pred cchhhccccccCCCCccceeeeecccccc-----chhheeccccccc----cccccchhhhhcCCCcceeecceecCCc-
Confidence 46789999999999999999988665554 4899998776222 23466565554 5999999999987766
Q ss_pred ccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEe-CCCCceEEeec
Q 035862 149 RGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLL-DGNFKPKLSDF 227 (393)
Q Consensus 149 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll-~~~~~~kl~Df 227 (393)
+.++|||.+.|+-|.+.+.... .+. ..+..|+.+|+.|+.|||.+ |+|||||||+|||+ ++.|+++|+||
T Consensus 390 ---~~~~v~e~l~g~ell~ri~~~~--~~~-~e~~~w~~~lv~Av~~LH~~---gvvhRDLkp~NIL~~~~~g~lrltyF 460 (612)
T KOG0603|consen 390 ---EIYLVMELLDGGELLRRIRSKP--EFC-SEASQWAAELVSAVDYLHEQ---GVVHRDLKPGNILLDGSAGHLRLTYF 460 (612)
T ss_pred ---eeeeeehhccccHHHHHHHhcc--hhH-HHHHHHHHHHHHHHHHHHhc---CeeecCCChhheeecCCCCcEEEEEe
Confidence 5699999999999988884333 233 67788999999999999998 99999999999999 68999999999
Q ss_pred cCCccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcCC
Q 035862 228 GLAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADG 307 (393)
Q Consensus 228 g~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 307 (393)
|.++..... ....+-|..|.|||++....|+.++||||||++||+||+|+.||..+....+ +...+
T Consensus 461 G~a~~~~~~-----~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~e--i~~~i------- 526 (612)
T KOG0603|consen 461 GFWSELERS-----CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGIE--IHTRI------- 526 (612)
T ss_pred chhhhCchh-----hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCchHH--HHHhh-------
Confidence 999875443 2344678899999999999999999999999999999999999987654411 11111
Q ss_pred cccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 035862 308 KKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKL 357 (393)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~ 357 (393)
........+|.++++|+.+||+.||.+||++.++..|.|.
T Consensus 527 ----------~~~~~s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h~w~ 566 (612)
T KOG0603|consen 527 ----------QMPKFSECVSDEAKDLLQQLLQVDPALRLGADEIGAHPWF 566 (612)
T ss_pred ----------cCCccccccCHHHHHHHHHhccCChhhCcChhhhccCcch
Confidence 1112224678999999999999999999999999999999
No 372
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=4.5e-37 Score=281.53 Aligned_cols=260 Identities=23% Similarity=0.328 Sum_probs=198.9
Q ss_pred CCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCc----ccHHHHHHHHHHhhcC-CCCccceeeeeeecCC
Q 035862 73 GFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL----QGHKQWLAEVQFLGVV-SHPNLVKLLGYCSTED 147 (393)
Q Consensus 73 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~----~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~ 147 (393)
.|++.+.||.|+||.||.|..... ...+..||+|.+..... .....+.+|+.++..+ +|+||+++++++....
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~--~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~ 78 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSG--HDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDT 78 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccC--CCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCC
Confidence 478889999999999999986422 12445799999865321 2235567899999999 5999999999887665
Q ss_pred cccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeec
Q 035862 148 ERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDF 227 (393)
Q Consensus 148 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Df 227 (393)
..++||||+.+++|.+++.. ...+++..+..++.|++.||.|||+. +++||||+|+|||++.++.+||+||
T Consensus 79 ----~~~lv~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~df 149 (290)
T cd05613 79 ----KLHLILDYINGGELFTHLSQ--RERFKEQEVQIYSGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDF 149 (290)
T ss_pred ----eEEEEEecCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEECCCCCEEEeeC
Confidence 56899999999999999854 34688999999999999999999998 9999999999999999999999999
Q ss_pred cCCccCCCCCCccccccccccCCccCccccccC--CCCchhhHHHHHHHHHHHHhCCCccCCCCchh-hhHHHHHHhhcC
Q 035862 228 GLAREGPTGDHTHVSTAVVGTYGYAAPEYIETG--HLKSQSDIWSFGVVLYEILTGRRVLERNRPTM-EQKLLEWVKQFP 304 (393)
Q Consensus 228 g~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DiwslGvil~elltg~~pf~~~~~~~-~~~~~~~~~~~~ 304 (393)
|++......... ......|+..|+|||.+.+. .++.++||||||+++|+|++|..||....... ...........
T Consensus 150 g~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~- 227 (290)
T cd05613 150 GLSKEFHEDEVE-RAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRILKS- 227 (290)
T ss_pred ccceeccccccc-ccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHHhhcc-
Confidence 998764332211 12245688999999998653 46789999999999999999999996432211 11111111000
Q ss_pred cCCcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHHHHHHH
Q 035862 305 ADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERP-----TMNQVVESLKLAV 359 (393)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rp-----s~~~~l~~l~~~~ 359 (393)
...++..++..+.+++.+||+.||++|| ++.+++.+.+...
T Consensus 228 --------------~~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~ 273 (290)
T cd05613 228 --------------EPPYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKHPFFQK 273 (290)
T ss_pred --------------CCCCCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcCccccc
Confidence 0011223457789999999999999997 8999999866543
No 373
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=100.00 E-value=6.1e-37 Score=280.33 Aligned_cols=257 Identities=24% Similarity=0.347 Sum_probs=195.0
Q ss_pred CCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCc----ccHHHHHHHHHHhhcC-CCCccceeeeeeecCC
Q 035862 73 GFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL----QGHKQWLAEVQFLGVV-SHPNLVKLLGYCSTED 147 (393)
Q Consensus 73 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~----~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~ 147 (393)
+|++.+.||+|++|.||++...... ..+..|++|.+..... .....+.+|+.++..+ +||||+++++.+....
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~--~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~ 78 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGH--DAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDT 78 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccc--cCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCC
Confidence 4788899999999999999864322 2345699998864321 2234567899999999 5999999999887665
Q ss_pred cccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeec
Q 035862 148 ERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDF 227 (393)
Q Consensus 148 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Df 227 (393)
..++||||+.+++|.+++.. ...+++..++.++.|++.||.|||+. +++||||+|+||+++.++.++|+||
T Consensus 79 ----~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~ql~~~l~~lH~~---~~~H~dl~p~nil~~~~~~~~l~df 149 (288)
T cd05583 79 ----KLHLILDYVNGGELFTHLYQ--REHFTESEVRVYIAEIVLALDHLHQL---GIIYRDIKLENILLDSEGHVVLTDF 149 (288)
T ss_pred ----EEEEEEecCCCCcHHHHHhh--cCCcCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEEEC
Confidence 56899999999999998843 34688999999999999999999998 9999999999999999999999999
Q ss_pred cCCccCCCCCCccccccccccCCccCccccccCC--CCchhhHHHHHHHHHHHHhCCCccCCCCchh-hhHHHHHHhhcC
Q 035862 228 GLAREGPTGDHTHVSTAVVGTYGYAAPEYIETGH--LKSQSDIWSFGVVLYEILTGRRVLERNRPTM-EQKLLEWVKQFP 304 (393)
Q Consensus 228 g~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DiwslGvil~elltg~~pf~~~~~~~-~~~~~~~~~~~~ 304 (393)
|++......... ......|+..|+|||.+.+.. .+.++||||||+++|+|++|..||....... ...........
T Consensus 150 g~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~- 227 (288)
T cd05583 150 GLSKEFLAEEEE-RAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILKS- 227 (288)
T ss_pred cccccccccccc-ccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHHHcc-
Confidence 998765433211 122346889999999987654 7889999999999999999999996432211 11111111000
Q ss_pred cCCcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHH---HHHHHHH
Q 035862 305 ADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMN---QVVESLK 356 (393)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~---~~l~~l~ 356 (393)
....+..++..+.+++.+||+.||++|||+. +++++++
T Consensus 228 --------------~~~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~~ 268 (288)
T cd05583 228 --------------KPPFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNHPF 268 (288)
T ss_pred --------------CCCCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcCcc
Confidence 0011223457789999999999999999965 4455554
No 374
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=100.00 E-value=1.5e-37 Score=291.44 Aligned_cols=272 Identities=24% Similarity=0.329 Sum_probs=202.5
Q ss_pred HHhcCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCC--cccHHHHHHHHHHhhcCCCCccceeeeeeecC
Q 035862 69 EATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG--LQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTE 146 (393)
Q Consensus 69 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 146 (393)
+..++|++...||+|++|.||+|.+..+ +..|++|.+.... ......+.+|+.+++.++|||++++++++...
T Consensus 12 ~~~~~y~~~~~ig~g~~g~vy~~~~~~~-----~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 86 (343)
T cd07851 12 EVPDRYQNLSPVGSGAYGQVCSAFDTKT-----GRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPA 86 (343)
T ss_pred cccCceEEEEEeccCCceEEEEEEECCC-----CcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcc
Confidence 3467899999999999999999997543 3469999886532 22335567899999999999999999877654
Q ss_pred Cc--ccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEE
Q 035862 147 DE--RGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKL 224 (393)
Q Consensus 147 ~~--~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl 224 (393)
+. .....++|+||+ +++|.+++.. ..+++..++.++.|++.||.|||+. |++||||||+||++++++.++|
T Consensus 87 ~~~~~~~~~~lv~e~~-~~~L~~~~~~---~~l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nill~~~~~~kL 159 (343)
T cd07851 87 SSLEDFQDVYLVTHLM-GADLNNIVKC---QKLSDDHIQFLVYQILRGLKYIHSA---GIIHRDLKPSNIAVNEDCELKI 159 (343)
T ss_pred ccccccccEEEEEecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEE
Confidence 42 122469999999 6799998843 4589999999999999999999998 9999999999999999999999
Q ss_pred eeccCCccCCCCCCccccccccccCCccCcccccc-CCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhc
Q 035862 225 SDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIET-GHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQF 303 (393)
Q Consensus 225 ~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~ 303 (393)
+|||++...... .....++..|+|||.+.+ ..++.++|||||||++|+|++|+.||......... .......
T Consensus 160 ~dfg~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~--~~i~~~~ 232 (343)
T cd07851 160 LDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQL--KRIMNLV 232 (343)
T ss_pred cccccccccccc-----ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHH--HHHHHhc
Confidence 999999764322 233467889999998865 46789999999999999999999999765432211 1111110
Q ss_pred CcCCccc---------ccc---cCccccccc---CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHH
Q 035862 304 PADGKKF---------SMM---IDPRLRNQY---SINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAV 359 (393)
Q Consensus 304 ~~~~~~~---------~~~---~~~~~~~~~---~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~~ 359 (393)
......+ ... +....+..+ ....+..+.+|+.+||+.||++|||+.+++.|.|...
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h~~~~~ 303 (343)
T cd07851 233 GTPDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAHPYLAE 303 (343)
T ss_pred CCCCHHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcCCCccc
Confidence 0000000 000 000000000 0123678999999999999999999999999987654
No 375
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=2.4e-37 Score=306.81 Aligned_cols=258 Identities=29% Similarity=0.424 Sum_probs=190.1
Q ss_pred HHhcCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCC-cccHHHHHHHHHHhhcCCCCccceeeeeeecCC
Q 035862 69 EATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG-LQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTED 147 (393)
Q Consensus 69 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 147 (393)
...++|+.+..||+||||.||+++++-++ ..||||++.-.. ........+|+..|++++|||||+++..+.+..
T Consensus 476 RY~~DFEEL~lLGkGGFG~VvkVRNKlDG-----r~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~ 550 (1351)
T KOG1035|consen 476 RYLNDFEELELLGKGGFGSVVKVRNKLDG-----REYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVEST 550 (1351)
T ss_pred hHhhhhHHHHHhcCCCCceEEEEeecccc-----hhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccC
Confidence 45678999999999999999999965544 459999987653 233456789999999999999999986432100
Q ss_pred -----------------------------------------------------c--------------------------
Q 035862 148 -----------------------------------------------------E-------------------------- 148 (393)
Q Consensus 148 -----------------------------------------------------~-------------------------- 148 (393)
.
T Consensus 551 ~~~~~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~ 630 (1351)
T KOG1035|consen 551 AELTVLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNL 630 (1351)
T ss_pred CccccccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccccccccccc
Confidence 0
Q ss_pred ------------------------------------ccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHH
Q 035862 149 ------------------------------------RGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEG 192 (393)
Q Consensus 149 ------------------------------------~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~ 192 (393)
....+||=||||+..+|.+++..+... -.....|.++++|++|
T Consensus 631 S~tS~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~-~~~d~~wrLFreIlEG 709 (1351)
T KOG1035|consen 631 SNTSDSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFN-SQRDEAWRLFREILEG 709 (1351)
T ss_pred ccccccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccc-hhhHHHHHHHHHHHHH
Confidence 003567889999887777776433322 1467889999999999
Q ss_pred HHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCCccCC----------------CCCCccccccccccCCccCccc
Q 035862 193 LAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGP----------------TGDHTHVSTAVVGTYGYAAPEY 256 (393)
Q Consensus 193 l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~----------------~~~~~~~~~~~~gt~~y~aPE~ 256 (393)
|.|+|+. |||||||||.||++++++.|||+|||+|.... .+......+..+||.-|+|||+
T Consensus 710 LaYIH~~---giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEl 786 (1351)
T KOG1035|consen 710 LAYIHDQ---GIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPEL 786 (1351)
T ss_pred HHHHHhC---ceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHH
Confidence 9999999 99999999999999999999999999998621 0111113457899999999999
Q ss_pred cccC---CCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHH-HHHHhh--cCcCCcccccccCcccccccCHHHHHHH
Q 035862 257 IETG---HLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKL-LEWVKQ--FPADGKKFSMMIDPRLRNQYSINAARRV 330 (393)
Q Consensus 257 ~~~~---~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l 330 (393)
+.+. .|+.|+|+|||||+++||+. ||. +.++... ..-++. +|.+ ..+.+ +..+.-
T Consensus 787 l~~~~~~~Yn~KiDmYSLGIVlFEM~y---PF~---TsMERa~iL~~LR~g~iP~~----~~f~~---------~~~~~e 847 (1351)
T KOG1035|consen 787 LSDTSSNKYNSKIDMYSLGIVLFEMLY---PFG---TSMERASILTNLRKGSIPEP----ADFFD---------PEHPEE 847 (1351)
T ss_pred hcccccccccchhhhHHHHHHHHHHhc---cCC---chHHHHHHHHhcccCCCCCC----ccccc---------ccchHH
Confidence 9765 49999999999999999986 354 3333211 111111 1111 00111 122345
Q ss_pred HHHHHHhcccCCCCCCCHHHHHHH
Q 035862 331 AKLADNCLKKNPEERPTMNQVVES 354 (393)
Q Consensus 331 ~~li~~~l~~dp~~Rps~~~~l~~ 354 (393)
..+|+.||+.||.+|||+.++|+.
T Consensus 848 ~slI~~Ll~hdP~kRPtA~eLL~s 871 (1351)
T KOG1035|consen 848 ASLIRWLLSHDPSKRPTATELLNS 871 (1351)
T ss_pred HHHHHHHhcCCCccCCCHHHHhhc
Confidence 679999999999999999999975
No 376
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=100.00 E-value=6.2e-39 Score=270.26 Aligned_cols=256 Identities=27% Similarity=0.428 Sum_probs=197.7
Q ss_pred cccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCc-ccHHHHHHHHHHhhc-CCCCccceeeeeeecCCcccce
Q 035862 75 NRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL-QGHKQWLAEVQFLGV-VSHPNLVKLLGYCSTEDERGIQ 152 (393)
Q Consensus 75 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~-l~h~niv~~~~~~~~~~~~~~~ 152 (393)
+-+..||.|+||+|++..++ ..++.+|||.++.... ...++++.|.+.... -+.||||++||.+..++.
T Consensus 67 qdlg~iG~G~fG~V~KM~hk-----~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGd---- 137 (361)
T KOG1006|consen 67 QDLGEIGNGAFGTVNKMLHK-----PSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGD---- 137 (361)
T ss_pred HHHHHhcCCcchhhhhhhcC-----ccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCc----
Confidence 33457999999999998865 3456799999987654 456678888876554 469999999998877764
Q ss_pred EEEEEeecCCCChHHH---HhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccC
Q 035862 153 RLLVYEYMPNRSLEDR---LFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGL 229 (393)
Q Consensus 153 ~~lv~e~~~~~~L~~~---l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~ 229 (393)
+++-||.| ..+|+.+ .+......+++..+-.|....+.||.||-.. ..|+|||+||+|||++..|.+||||||+
T Consensus 138 cWiCMELM-d~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~--lkiIHRDvKPSNILldr~G~vKLCDFGI 214 (361)
T KOG1006|consen 138 CWICMELM-DISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEE--LKIIHRDVKPSNILLDRHGDVKLCDFGI 214 (361)
T ss_pred eeeeHHHH-hhhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHH--hhhhhccCChhheEEecCCCEeeecccc
Confidence 48899999 4476553 3455667899999999999999999999876 6899999999999999999999999999
Q ss_pred CccCCCCCCccccccccccCCccCcccccc--CCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcCC
Q 035862 230 AREGPTGDHTHVSTAVVGTYGYAAPEYIET--GHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADG 307 (393)
Q Consensus 230 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 307 (393)
+..+...- ..+...|-..|||||.+.. ..|+.++|+||||++|||+.||..|+.......++.-.-.....|.
T Consensus 215 cGqLv~Si---AkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~Vv~gdpp~-- 289 (361)
T KOG1006|consen 215 CGQLVDSI---AKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQVVIGDPPI-- 289 (361)
T ss_pred hHhHHHHH---HhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHHHHHHHHHHcCCCCe--
Confidence 97654322 3455678889999999853 4699999999999999999999999987655444322211111110
Q ss_pred cccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 035862 308 KKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLK 356 (393)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~ 356 (393)
+. ...-..+.+..+..||.-||.+|-..||...++.++..
T Consensus 290 -----l~----~~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~~f 329 (361)
T KOG1006|consen 290 -----LL----FDKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKKFPF 329 (361)
T ss_pred -----ec----CcccccccCHHHHHHHHHHhhcccccCcchhhhhcCch
Confidence 00 11111246788999999999999999999999999854
No 377
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=100.00 E-value=1.7e-36 Score=305.65 Aligned_cols=147 Identities=28% Similarity=0.368 Sum_probs=127.2
Q ss_pred hcCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCc---ccHHHHHHHHHHhhcCCCCccceeeeeeecCC
Q 035862 71 TNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL---QGHKQWLAEVQFLGVVSHPNLVKLLGYCSTED 147 (393)
Q Consensus 71 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 147 (393)
.++|.++++||+|+||.||+|.+... +..||+|++..... .....+..|+.++..++||||+++++++...+
T Consensus 3 ~~~y~i~~~LG~G~fg~Vy~a~~~~~-----~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~ 77 (669)
T cd05610 3 IEEFVIVKPISRGAFGKVYLGRKKNN-----SKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSAN 77 (669)
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCC-----CcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECC
Confidence 46799999999999999999997643 34699999875432 22356778999999999999999998887666
Q ss_pred cccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeec
Q 035862 148 ERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDF 227 (393)
Q Consensus 148 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Df 227 (393)
+.|+||||+.+++|.+++.. ...+++..++.++.||+.||.|||.. +|+||||||+|||++.++.+||+||
T Consensus 78 ----~~~lVmEy~~g~~L~~li~~--~~~l~~~~~~~i~~qil~aL~yLH~~---gIiHrDLKP~NILl~~~g~vkL~DF 148 (669)
T cd05610 78 ----NVYLVMEYLIGGDVKSLLHI--YGYFDEEMAVKYISEVALALDYLHRH---GIIHRDLKPDNMLISNEGHIKLTDF 148 (669)
T ss_pred ----EEEEEEeCCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCccHHHEEEcCCCCEEEEeC
Confidence 56999999999999999843 34578899999999999999999998 9999999999999999999999999
Q ss_pred cCCc
Q 035862 228 GLAR 231 (393)
Q Consensus 228 g~a~ 231 (393)
|+++
T Consensus 149 Gls~ 152 (669)
T cd05610 149 GLSK 152 (669)
T ss_pred CCCc
Confidence 9885
No 378
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4.7e-37 Score=295.95 Aligned_cols=261 Identities=27% Similarity=0.389 Sum_probs=213.0
Q ss_pred HHhcCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcccHHHHHHHHHHhhcCC-CCccceeeeeeecCC
Q 035862 69 EATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVS-HPNLVKLLGYCSTED 147 (393)
Q Consensus 69 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~ 147 (393)
...+.|++...||.|.+|.||+++.+.++ ...|+|++.... ....+...|..+|+... |||++.++|++...+
T Consensus 16 dp~d~~ei~evig~Gtygkv~k~k~~~~~-----~~aa~kI~~~~~-d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~ 89 (953)
T KOG0587|consen 16 DPADIFEIIEVIGNGTYGKVYKGRHVKTG-----QLAAIKIMDPTE-DEEEEIELEYNMLKKYSHHPNVATFYGAFIKKD 89 (953)
T ss_pred CCCCccEEEEEEeeccceeEEEEeeeecC-----ceeeeEeecCCc-cccHHHHHHHHHHHhccCCCCcceEEEEEEEec
Confidence 34567999999999999999999966444 347788776654 23455667888998875 999999999886543
Q ss_pred c-ccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEee
Q 035862 148 E-RGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSD 226 (393)
Q Consensus 148 ~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~D 226 (393)
. .+-+++||||||.||+..|++.+.....+.|..+..|++.++.|+.+||.+ .++|||||-.|||++.+|.|||+|
T Consensus 90 ~~~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~n---kviHRDikG~NiLLT~e~~VKLvD 166 (953)
T KOG0587|consen 90 PGNGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNN---KVIHRDIKGQNVLLTENAEVKLVD 166 (953)
T ss_pred CCCCCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhc---ceeeecccCceEEEeccCcEEEee
Confidence 3 345889999999999999999877788899999999999999999999999 999999999999999999999999
Q ss_pred ccCCccCCCCCCccccccccccCCccCcccccc-----CCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHh
Q 035862 227 FGLAREGPTGDHTHVSTAVVGTYGYAAPEYIET-----GHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVK 301 (393)
Q Consensus 227 fg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~ 301 (393)
||++..+...-. .....+|||.|||||++.. ..|+..+|+||||++..||.-|.+|+-+--+. ..+.
T Consensus 167 FGvSaQldsT~g--rRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPm------raLF 238 (953)
T KOG0587|consen 167 FGVSAQLDSTVG--RRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPM------RALF 238 (953)
T ss_pred eeeeeeeecccc--cccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchh------hhhc
Confidence 999987654432 3467899999999999964 35788999999999999999999999754332 1111
Q ss_pred hcCcCCcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 035862 302 QFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESL 355 (393)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l 355 (393)
.+| .++......+...+.++.+||..||.+|..+||++.++++|.
T Consensus 239 ~Ip---------RNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~hp 283 (953)
T KOG0587|consen 239 LIP---------RNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLKHP 283 (953)
T ss_pred cCC---------CCCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhccCC
Confidence 121 223333444567889999999999999999999999999874
No 379
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-36 Score=273.05 Aligned_cols=266 Identities=29% Similarity=0.393 Sum_probs=207.2
Q ss_pred HHHhcCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcccHHHHHHHHHHhhc--CCCCccceeeeeeec
Q 035862 68 REATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGV--VSHPNLVKLLGYCST 145 (393)
Q Consensus 68 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~~~~~~~~ 145 (393)
+-...+..+.+.||+|.||.||+|.++... ||||++.... ...+.+|.+|.+. ++|+||+.|++.-..
T Consensus 207 RTiarqI~L~e~IGkGRyGEVwrG~wrGe~-------VAVKiF~srd---E~SWfrEtEIYqTvmLRHENILgFIaaD~~ 276 (513)
T KOG2052|consen 207 RTIARQIVLQEIIGKGRFGEVWRGRWRGED-------VAVKIFSSRD---ERSWFRETEIYQTVMLRHENILGFIAADNK 276 (513)
T ss_pred HhhhheeEEEEEecCccccceeeccccCCc-------eEEEEecccc---hhhhhhHHHHHHHHHhccchhhhhhhcccc
Confidence 344567888999999999999999998655 9999997643 3567788888876 689999999998887
Q ss_pred CCcccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcC-----CCCCeEeccCCCCCeEeCCCC
Q 035862 146 EDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEG-----LEIQVIYRDFKTSNVLLDGNF 220 (393)
Q Consensus 146 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~-----~~~~ivH~Dikp~NIll~~~~ 220 (393)
+...-.+++||.+|.+.|+|.|||.. .+++....+.++..++.||++||.. ....|.|||||..||||..+|
T Consensus 277 ~~gs~TQLwLvTdYHe~GSL~DyL~r---~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~ 353 (513)
T KOG2052|consen 277 DNGSWTQLWLVTDYHEHGSLYDYLNR---NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNG 353 (513)
T ss_pred CCCceEEEEEeeecccCCcHHHHHhh---ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCC
Confidence 77777899999999999999999943 5688999999999999999999964 345799999999999999999
Q ss_pred ceEEeeccCCccCCCCCCc--cccccccccCCccCccccccCC----C--CchhhHHHHHHHHHHHHhCC----------
Q 035862 221 KPKLSDFGLAREGPTGDHT--HVSTAVVGTYGYAAPEYIETGH----L--KSQSDIWSFGVVLYEILTGR---------- 282 (393)
Q Consensus 221 ~~kl~Dfg~a~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~----~--~~~~DiwslGvil~elltg~---------- 282 (393)
..-|+|+|+|......... ...+..+||.+|||||++...- + -..+||||||.++||++-..
T Consensus 354 ~C~IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~ 433 (513)
T KOG2052|consen 354 TCCIADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQ 433 (513)
T ss_pred cEEEeeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhc
Confidence 9999999999876544221 2446679999999999995421 1 23589999999999998743
Q ss_pred CccCCC---CchhhhHHHHHHhhcCcCCcccccccCcccccccC-----HHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 035862 283 RVLERN---RPTMEQKLLEWVKQFPADGKKFSMMIDPRLRNQYS-----INAARRVAKLADNCLKKNPEERPTMNQVVES 354 (393)
Q Consensus 283 ~pf~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~ 354 (393)
.||.+- +++.++.. ..+..+.+++..+ ..+-..+.++++.||..+|.-|.|+-.+-+.
T Consensus 434 ~Pyyd~Vp~DPs~eeMr--------------kVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKt 499 (513)
T KOG2052|consen 434 LPYYDVVPSDPSFEEMR--------------KVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKKT 499 (513)
T ss_pred CCcccCCCCCCCHHHHh--------------cceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHH
Confidence 455332 22222110 1111122222222 2455778899999999999999999999999
Q ss_pred HHHHHh
Q 035862 355 LKLAVQ 360 (393)
Q Consensus 355 l~~~~~ 360 (393)
+.++.+
T Consensus 500 l~~l~~ 505 (513)
T KOG2052|consen 500 LAKLSN 505 (513)
T ss_pred HHHHhc
Confidence 988875
No 380
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=100.00 E-value=1.2e-36 Score=272.40 Aligned_cols=243 Identities=29% Similarity=0.399 Sum_probs=193.5
Q ss_pred ecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcc---cHHHHHHHHHHhhcCCCCccceeeeeeecCCcccceEEEE
Q 035862 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQ---GHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLV 156 (393)
Q Consensus 80 lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv 156 (393)
||.|+||.||++..... +..+++|.+...... ....+..|+.+++.++||||+++++.+...+ ..++|
T Consensus 1 lg~G~~~~v~~~~~~~~-----~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----~~~~v 71 (250)
T cd05123 1 LGKGSFGKVLLVRKKDT-----GKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEE----KLYLV 71 (250)
T ss_pred CCCCCceEEEEEEECCC-----CcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCC----eeEEE
Confidence 69999999999986532 346999988764322 3446788999999999999999999887665 56999
Q ss_pred EeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCCccCCCC
Q 035862 157 YEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTG 236 (393)
Q Consensus 157 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~ 236 (393)
|||+.+++|.+++... ..+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||++......
T Consensus 72 ~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lh~~---~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~ 146 (250)
T cd05123 72 LEYAPGGELFSHLSKE--GRFSEERARFYAAEIVLALEYLHSL---GIIYRDLKPENILLDADGHIKLTDFGLAKELSSE 146 (250)
T ss_pred EecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcceEEEcCCCcEEEeecCcceecccC
Confidence 9999999999998433 4689999999999999999999998 9999999999999999999999999998765432
Q ss_pred CCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcCCcccccccCc
Q 035862 237 DHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKFSMMIDP 316 (393)
Q Consensus 237 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (393)
. .......++..|+|||.+.+..++.++|+||||+++|+|++|..||...... . ....... ..
T Consensus 147 ~--~~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~--~-~~~~~~~---~~--------- 209 (250)
T cd05123 147 G--SRTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRK--E-IYEKILK---DP--------- 209 (250)
T ss_pred C--CcccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH--H-HHHHHhc---CC---------
Confidence 1 1223456788999999998888899999999999999999999999765431 1 1111110 00
Q ss_pred ccccccCHHHHHHHHHHHHHhcccCCCCCCCH---HHHHHHHH
Q 035862 317 RLRNQYSINAARRVAKLADNCLKKNPEERPTM---NQVVESLK 356 (393)
Q Consensus 317 ~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~---~~~l~~l~ 356 (393)
...+...+..+.+++.+||..||++||++ .++++|.|
T Consensus 210 ---~~~~~~~~~~l~~~i~~~l~~~p~~R~~~~~~~~l~~~~~ 249 (250)
T cd05123 210 ---LRFPEFLSPEARDLISGLLQKDPTKRLGSGGAEEIKAHPF 249 (250)
T ss_pred ---CCCCCCCCHHHHHHHHHHhcCCHhhCCCcccHHHHHhCCC
Confidence 01112235788999999999999999999 77777653
No 381
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=5.4e-37 Score=292.92 Aligned_cols=263 Identities=27% Similarity=0.410 Sum_probs=220.5
Q ss_pred CcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCC-CcccHHHHHHHHHHhhcCCCCccceeeeeeecCCcccce
Q 035862 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNH-GLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQ 152 (393)
Q Consensus 74 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 152 (393)
....++||+|+||+||+|.+... .+.-+.+||+|++... ......++++|+.+|..+.|||++++++++....
T Consensus 698 lkk~kvLGsgAfGtV~kGiw~Pe-ge~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~----- 771 (1177)
T KOG1025|consen 698 LKKDKVLGSGAFGTVYKGIWIPE-GENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST----- 771 (1177)
T ss_pred hhhhceeccccceeEEeeeEecC-CceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-----
Confidence 44567899999999999998766 4567788999998754 3445677899999999999999999999998775
Q ss_pred EEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCCcc
Q 035862 153 RLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLARE 232 (393)
Q Consensus 153 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~ 232 (393)
+-||++|+++|.|.++++... ..+-.+..+.|..||++||.|||.+ ++|||||-.+||||..-..+||.|||+++.
T Consensus 772 ~qlvtq~mP~G~LlDyvr~hr-~~igsq~lLnw~~QIAkgM~YLe~q---rlVHrdLaaRNVLVksP~hvkitdfgla~l 847 (1177)
T KOG1025|consen 772 LQLVTQLMPLGCLLDYVREHR-DNIGSQDLLNWCYQIAKGMKYLEEQ---RLVHRDLAARNVLVKSPNHVKITDFGLAKL 847 (1177)
T ss_pred HHHHHHhcccchHHHHHHHhh-ccccHHHHHHHHHHHHHHHHHHHhc---chhhhhhhhhheeecCCCeEEEEecchhhc
Confidence 368999999999999997644 4578888999999999999999998 999999999999999999999999999998
Q ss_pred CCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHh-CCCccCCCCchhhhHHHHHHhhcCcCCcccc
Q 035862 233 GPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILT-GRRVLERNRPTMEQKLLEWVKQFPADGKKFS 311 (393)
Q Consensus 233 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (393)
....+...........+.|||-|.+....|+.++|||||||++||++| |..|+..-......++.
T Consensus 848 l~~d~~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~dll-------------- 913 (1177)
T KOG1025|consen 848 LAPDEKEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPDLL-------------- 913 (1177)
T ss_pred cCcccccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhhHHH--------------
Confidence 766655544445566778999999999999999999999999999998 88888765443333322
Q ss_pred cccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhhc
Q 035862 312 MMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQESE 363 (393)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~~~~~~ 363 (393)
..+-+...+..++.+++.++.+||..|+..||+++++...+.....+..
T Consensus 914 ---e~geRLsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~ardpq 962 (1177)
T KOG1025|consen 914 ---EKGERLSQPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMARDPQ 962 (1177)
T ss_pred ---hccccCCCCCCccHHHHHHHHHHhccCcccCccHHHHHHHHHHHhcCcc
Confidence 2333344566788999999999999999999999999999988766553
No 382
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-37 Score=274.42 Aligned_cols=242 Identities=26% Similarity=0.416 Sum_probs=198.0
Q ss_pred cCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcc---cHHHHHHHHHHhhcCC-CCccceeeeeeecCC
Q 035862 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQ---GHKQWLAEVQFLGVVS-HPNLVKLLGYCSTED 147 (393)
Q Consensus 72 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~ 147 (393)
.+|..+.+||.|+||.|-+|.- ++....+|||++++.... ..+--+.|-++|.... -|.+++++.+|.+-+
T Consensus 349 tDFnFl~VlGKGSFGKVlLaer-----kgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmD 423 (683)
T KOG0696|consen 349 TDFNFLMVLGKGSFGKVLLAER-----KGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMD 423 (683)
T ss_pred cccceEEEeccCccceeeeecc-----cCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhh
Confidence 4699999999999999999974 445557999999876332 2222356777887765 678899999998888
Q ss_pred cccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeec
Q 035862 148 ERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDF 227 (393)
Q Consensus 148 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Df 227 (393)
.+|+||||+.||+|--.| ..-+.+.+..+..++..|+-||-+||++ ||++||||.+|||++.+|.+||+||
T Consensus 424 ----RLyFVMEyvnGGDLMyhi--QQ~GkFKEp~AvFYAaEiaigLFFLh~k---gIiYRDLKLDNvmLd~eGHiKi~DF 494 (683)
T KOG0696|consen 424 ----RLYFVMEYVNGGDLMYHI--QQVGKFKEPVAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIADF 494 (683)
T ss_pred ----heeeEEEEecCchhhhHH--HHhcccCCchhhhhhHHHHHHhhhhhcC---CeeeeeccccceEeccCCceEeeec
Confidence 569999999999998777 3445688889999999999999999999 9999999999999999999999999
Q ss_pred cCCccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcCC
Q 035862 228 GLAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADG 307 (393)
Q Consensus 228 g~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 307 (393)
|++........ .....+|||.|+|||.+..++|+..+|.||+||+||||+.|++||++.++..... ..+..
T Consensus 495 GmcKEni~~~~--TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~--aI~eh----- 565 (683)
T KOG0696|consen 495 GMCKENIFDGV--TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQ--AIMEH----- 565 (683)
T ss_pred ccccccccCCc--ceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHH--HHHHc-----
Confidence 99986544433 3467899999999999999999999999999999999999999998765443221 11111
Q ss_pred cccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCC
Q 035862 308 KKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPT 347 (393)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps 347 (393)
.-.++..++.++..+.+..|.+.|.+|..
T Consensus 566 -----------nvsyPKslSkEAv~ickg~ltK~P~kRLG 594 (683)
T KOG0696|consen 566 -----------NVSYPKSLSKEAVAICKGLLTKHPGKRLG 594 (683)
T ss_pred -----------cCcCcccccHHHHHHHHHHhhcCCccccC
Confidence 12345567889999999999999999964
No 383
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-36 Score=300.68 Aligned_cols=266 Identities=30% Similarity=0.471 Sum_probs=212.9
Q ss_pred cCCcccceecccCCceEEEEEEcCCCCCC--CceEEEEEEecCCCc-ccHHHHHHHHHHhhcCC-CCccceeeeeeecCC
Q 035862 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRG--EPLVVAVKKLNNHGL-QGHKQWLAEVQFLGVVS-HPNLVKLLGYCSTED 147 (393)
Q Consensus 72 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~--~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~ 147 (393)
++..+.+.||+|+||.|++|......... ....||+|.+..... ...+.+..|+++++.+. |+||+.++|+|...+
T Consensus 296 ~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~~~ 375 (609)
T KOG0200|consen 296 ENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQDG 375 (609)
T ss_pred hhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeeccCC
Confidence 34456669999999999999866444332 367899999876533 34567889999999986 999999999998854
Q ss_pred cccceEEEEEeecCCCChHHHHhhcC------------C--CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCC
Q 035862 148 ERGIQRLLVYEYMPNRSLEDRLFSRA------------Q--PTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSN 213 (393)
Q Consensus 148 ~~~~~~~lv~e~~~~~~L~~~l~~~~------------~--~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~N 213 (393)
.+++|+||+..|+|.++++... . ..++....+.++.||+.|++||++. ++|||||..+|
T Consensus 376 ----~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~---~~vHRDLAaRN 448 (609)
T KOG0200|consen 376 ----PLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASV---PCVHRDLAARN 448 (609)
T ss_pred ----ceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhC---Cccchhhhhhh
Confidence 4599999999999999996544 0 1388889999999999999999998 99999999999
Q ss_pred eEeCCCCceEEeeccCCccCCCCCCcccccccc--ccCCccCccccccCCCCchhhHHHHHHHHHHHHh-CCCccCCCCc
Q 035862 214 VLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVV--GTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILT-GRRVLERNRP 290 (393)
Q Consensus 214 Ill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~--gt~~y~aPE~~~~~~~~~~~DiwslGvil~ellt-g~~pf~~~~~ 290 (393)
||++.+..+||+|||+++.....+..... ... -...|||||.+....|+.++||||+||+|||++| |..||.+-..
T Consensus 449 VLi~~~~~~kIaDFGlar~~~~~~~y~~~-~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~ 527 (609)
T KOG0200|consen 449 VLITKNKVIKIADFGLARDHYNKDYYRTK-SSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPP 527 (609)
T ss_pred EEecCCCEEEEccccceeccCCCCceEec-CCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCc
Confidence 99999999999999999965554443211 112 2346999999999999999999999999999999 7788865221
Q ss_pred hhhhHHHHHHhhcCcCCcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhh
Q 035862 291 TMEQKLLEWVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQE 361 (393)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~~~~ 361 (393)
. ..+.+ .+.++.+...|..++.+++++++.||+.+|++||++.++.+.+...+++
T Consensus 528 ~--~~l~~--------------~l~~G~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~l~~ 582 (609)
T KOG0200|consen 528 T--EELLE--------------FLKEGNRMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKHLQD 582 (609)
T ss_pred H--HHHHH--------------HHhcCCCCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHHHHH
Confidence 1 11121 2233445556667889999999999999999999999999999997654
No 384
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=100.00 E-value=1.2e-36 Score=270.42 Aligned_cols=228 Identities=21% Similarity=0.233 Sum_probs=179.1
Q ss_pred cCCceEEEEEEcCCCCCCCceEEEEEEecCCCcccHHHHHHHHHHhhcCCCCccceeeeeeecCCcccceEEEEEeecCC
Q 035862 83 GGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPN 162 (393)
Q Consensus 83 G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv~e~~~~ 162 (393)
|.+|.||++.+..++. .|++|.+.... ...+|...+....||||+++++++...+ ..++||||+.+
T Consensus 4 g~~~~v~~~~~~~~~~-----~~~~K~i~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~~----~~~lv~e~~~~ 69 (237)
T cd05576 4 GVIDKVLLVMDTRTQQ-----TFILKGLRKSS-----EYSRERLTIIPHCVPNMVCLHKYIVSED----SVFLVLQHAEG 69 (237)
T ss_pred cccceEEEEEEccCCc-----EEEEEeecchh-----hhhhHHHHHHhcCCCceeehhhheecCC----eEEEEEecCCC
Confidence 8899999999765443 59999987643 2233445555567999999999988765 56999999999
Q ss_pred CChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCCccCCCCCCcccc
Q 035862 163 RSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVS 242 (393)
Q Consensus 163 ~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~ 242 (393)
++|.+++... ..+++..+..++.|++.||.|||+. +++||||||+||+++.++.++++|||.+...... .
T Consensus 70 ~~L~~~l~~~--~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~-----~ 139 (237)
T cd05576 70 GKLWSHISKF--LNIPEECVKRWAAEMVVALDALHRE---GIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDS-----C 139 (237)
T ss_pred CCHHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCCCCEEEecccchhccccc-----c
Confidence 9999998543 4589999999999999999999998 9999999999999999999999999987654322 1
Q ss_pred ccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcCCcccccccCccccccc
Q 035862 243 TAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKFSMMIDPRLRNQY 322 (393)
Q Consensus 243 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (393)
....++..|+|||.+.+..++.++|+||+|+++|+|++|..|+........ .......
T Consensus 140 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~~----------------------~~~~~~~ 197 (237)
T cd05576 140 DGEAVENMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSGIN----------------------THTTLNI 197 (237)
T ss_pred ccCCcCccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchhcc----------------------cccccCC
Confidence 233556789999999888899999999999999999999988753321100 0000012
Q ss_pred CHHHHHHHHHHHHHhcccCCCCCCCH-----HHHHHHHH
Q 035862 323 SINAARRVAKLADNCLKKNPEERPTM-----NQVVESLK 356 (393)
Q Consensus 323 ~~~~~~~l~~li~~~l~~dp~~Rps~-----~~~l~~l~ 356 (393)
+..++..+.+++.+||+.||++||++ .++++|.|
T Consensus 198 ~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h~~ 236 (237)
T cd05576 198 PEWVSEEARSLLQQLLQFNPTERLGAGVAGVEDIKSHPF 236 (237)
T ss_pred cccCCHHHHHHHHHHccCCHHHhcCCCccchHHHHcCCC
Confidence 22356789999999999999999986 77776643
No 385
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-36 Score=269.09 Aligned_cols=271 Identities=26% Similarity=0.350 Sum_probs=226.0
Q ss_pred HHHHHHhcCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcc-cHHHHHHHHHHhhcCCCCccceeeeee
Q 035862 65 QELREATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQ-GHKQWLAEVQFLGVVSHPNLVKLLGYC 143 (393)
Q Consensus 65 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~ 143 (393)
.++.....+++...++-+|+||.||.|.++..+...+.+.|.+|.++....+ ....++.|...+..+.|||+.++.+++
T Consensus 277 ~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ 356 (563)
T KOG1024|consen 277 QELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVS 356 (563)
T ss_pred HhhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEE
Confidence 3444445678888899999999999999988777777778888888765333 345678899999999999999999999
Q ss_pred ecCCcccceEEEEEeecCCCChHHHHhh------cCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeC
Q 035862 144 STEDERGIQRLLVYEYMPNRSLEDRLFS------RAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLD 217 (393)
Q Consensus 144 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~------~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~ 217 (393)
.++.. .++.++.++.-|+|..++.. .....+...+...++.|++.|++|||+. ++||.||..+|.+|+
T Consensus 357 ie~~~---~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~---~ViHkDiAaRNCvId 430 (563)
T KOG1024|consen 357 IEDYA---TPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNH---GVIHKDIAARNCVID 430 (563)
T ss_pred eeccC---cceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhc---Ccccchhhhhcceeh
Confidence 87654 56889999999999999962 1234567778889999999999999998 999999999999999
Q ss_pred CCCceEEeeccCCccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHh-CCCccCCCCchhhhHH
Q 035862 218 GNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILT-GRRVLERNRPTMEQKL 296 (393)
Q Consensus 218 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ellt-g~~pf~~~~~~~~~~~ 296 (393)
+...+||+|=.+++.+-..+..........+..||+||.+.+..|+.++|+|||||++|||+| |+.|+..-++.+....
T Consensus 431 d~LqVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~~y 510 (563)
T KOG1024|consen 431 DQLQVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEMEHY 510 (563)
T ss_pred hheeEEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHHHHH
Confidence 999999999999998777766666666677889999999999999999999999999999999 8888876665443322
Q ss_pred HHHHhhcCcCCcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q 035862 297 LEWVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLA 358 (393)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~ 358 (393)
+.++.+...|.+|+++++.++..||..+|++||+++++..-|..-
T Consensus 511 -----------------lkdGyRlaQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF 555 (563)
T KOG1024|consen 511 -----------------LKDGYRLAQPFNCPDELFTVMACCWALLPEERPSFSQLVICLSEF 555 (563)
T ss_pred -----------------HhccceecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHH
Confidence 223445555668999999999999999999999999998887543
No 386
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=100.00 E-value=9.9e-37 Score=251.79 Aligned_cols=268 Identities=21% Similarity=0.350 Sum_probs=207.1
Q ss_pred hcCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcccHHHHHHHHHHhhcCC-CCccceeeeeeecCCcc
Q 035862 71 TNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVS-HPNLVKLLGYCSTEDER 149 (393)
Q Consensus 71 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~ 149 (393)
.++|++.+++|+|.++.||.|....+.+ .++||.+++- ..+.+.+|++||..+. ||||++++++..++...
T Consensus 37 ~ddYeivrk~GRGKYSEVFeg~~~~~~e-----K~ViKiLKPV---kkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~Sk 108 (338)
T KOG0668|consen 37 QDDYEIVRKVGRGKYSEVFEGINITNNE-----KCVIKILKPV---KKKKIKREIKILQNLRGGPNIIKLLDIVKDPESK 108 (338)
T ss_pred cchHHHHHHHcCccHhhHhcccccCCCc-----eEEEeeechH---HHHHHHHHHHHHHhccCCCCeeehhhhhcCcccc
Confidence 4689999999999999999998654444 3899998763 3467889999999998 99999999998877665
Q ss_pred cceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCC-CceEEeecc
Q 035862 150 GIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGN-FKPKLSDFG 228 (393)
Q Consensus 150 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~-~~~kl~Dfg 228 (393)
.+.+|+||+++.+...+. ++++...++.++.+++.||.|||+. ||+|||+||.|++|+.. -.++|+|+|
T Consensus 109 --tpaLiFE~v~n~Dfk~ly-----~tl~d~dIryY~~elLkALdyCHS~---GImHRDVKPhNvmIdh~~rkLrlIDWG 178 (338)
T KOG0668|consen 109 --TPSLIFEYVNNTDFKQLY-----PTLTDYDIRYYIYELLKALDYCHSM---GIMHRDVKPHNVMIDHELRKLRLIDWG 178 (338)
T ss_pred --CchhHhhhhccccHHHHh-----hhhchhhHHHHHHHHHHHHhHHHhc---CcccccCCcceeeechhhceeeeeecc
Confidence 568999999887776654 5678888999999999999999999 99999999999999865 569999999
Q ss_pred CCccCCCCCCccccccccccCCccCcccccc-CCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHH-----------
Q 035862 229 LAREGPTGDHTHVSTAVVGTYGYAAPEYIET-GHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKL----------- 296 (393)
Q Consensus 229 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~----------- 296 (393)
+|.+...+... +..+.+..|..||++.. ..|+..-|+|||||++..|+..+.||-......++..
T Consensus 179 LAEFYHp~~eY---nVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el 255 (338)
T KOG0668|consen 179 LAEFYHPGKEY---NVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDEL 255 (338)
T ss_pred hHhhcCCCcee---eeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHH
Confidence 99887665543 34577889999998865 6789999999999999999999999976655544422
Q ss_pred HHHHhhcCcC-CcccccccCccc--------ccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHH
Q 035862 297 LEWVKQFPAD-GKKFSMMIDPRL--------RNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAV 359 (393)
Q Consensus 297 ~~~~~~~~~~-~~~~~~~~~~~~--------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~~ 359 (393)
...+..+... ...+..++.... ......-.++++.+|+.++|.+|-.+|+|++|++.|.....
T Consensus 256 ~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~HpyF~~ 327 (338)
T KOG0668|consen 256 YAYLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAHPYFAP 327 (338)
T ss_pred HHHHHHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcCchHHH
Confidence 1122111111 011111111111 11111234688999999999999999999999999987654
No 387
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.9e-37 Score=278.08 Aligned_cols=255 Identities=25% Similarity=0.372 Sum_probs=211.4
Q ss_pred hcCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCccc---HHHHHHHHHHhhcCCCCccceeeeeeecCC
Q 035862 71 TNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQG---HKQWLAEVQFLGVVSHPNLVKLLGYCSTED 147 (393)
Q Consensus 71 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 147 (393)
..+++++..||.|+||.|-++...... ..+|+|++++..... ......|-.||..++.|.||++|..|.++.
T Consensus 419 l~dl~~iaTLGvGgFGRVELV~~~~~~-----~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~k 493 (732)
T KOG0614|consen 419 LSDLKRIATLGVGGFGRVELVKVNSQK-----ATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSK 493 (732)
T ss_pred hhhhhhhhhcccCccceEEEEEecccc-----hHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccch
Confidence 456778889999999999998865332 248899888764432 345678999999999999999999998777
Q ss_pred cccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeec
Q 035862 148 ERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDF 227 (393)
Q Consensus 148 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Df 227 (393)
+.|++||-|-||.|-..| +..+.+...+++.++..+++|++|||++ |||+|||||+|++++.+|-+||.||
T Consensus 494 ----yvYmLmEaClGGElWTiL--rdRg~Fdd~tarF~~acv~EAfeYLH~k---~iIYRDLKPENllLd~~Gy~KLVDF 564 (732)
T KOG0614|consen 494 ----YVYMLMEACLGGELWTIL--RDRGSFDDYTARFYVACVLEAFEYLHRK---GIIYRDLKPENLLLDNRGYLKLVDF 564 (732)
T ss_pred ----hhhhhHHhhcCchhhhhh--hhcCCcccchhhhhHHHHHHHHHHHHhc---CceeccCChhheeeccCCceEEeeh
Confidence 669999999999999988 5556789999999999999999999999 9999999999999999999999999
Q ss_pred cCCccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcCC
Q 035862 228 GLAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADG 307 (393)
Q Consensus 228 g~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 307 (393)
|+|+....+..+ .+++|||.|.|||++.+...+.++|.||||+++|||++|.+||...++-....++ ++.+.
T Consensus 565 GFAKki~~g~KT---wTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~I--LkGid--- 636 (732)
T KOG0614|consen 565 GFAKKIGSGRKT---WTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLI--LKGID--- 636 (732)
T ss_pred hhHHHhccCCce---eeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHH--Hhhhh---
Confidence 999987666544 5679999999999999999999999999999999999999999987664332221 11110
Q ss_pred cccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCC-----HHHHHHHHHHH
Q 035862 308 KKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPT-----MNQVVESLKLA 358 (393)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps-----~~~~l~~l~~~ 358 (393)
...+|..+.....+||+++-..+|.+|.. +.+|-+|-|..
T Consensus 637 -----------~i~~Pr~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH~Wf~ 681 (732)
T KOG0614|consen 637 -----------KIEFPRRITKTATDLIKKLCRDNPTERLGYQKGGINDIKKHRWFE 681 (732)
T ss_pred -----------hhhcccccchhHHHHHHHHHhcCcHhhhccccCChHHHHhhhhhh
Confidence 11233345677889999998999999986 88999998864
No 388
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4.3e-36 Score=279.58 Aligned_cols=254 Identities=26% Similarity=0.347 Sum_probs=199.0
Q ss_pred CCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcccH---HHHHHHHHHhhcCCCCccceeeeeeecCCcc
Q 035862 73 GFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGH---KQWLAEVQFLGVVSHPNLVKLLGYCSTEDER 149 (393)
Q Consensus 73 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~---~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 149 (393)
-|..++.||-|+||.|.++.-.++ ..+||+|.+.+.....+ .....|-.||.....+.||+||-.|.+.+
T Consensus 630 mFvkik~iGvGAFGeV~Lv~KvDT-----~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkd-- 702 (1034)
T KOG0608|consen 630 MFVKIKTIGVGAFGEVCLVRKVDT-----RALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKD-- 702 (1034)
T ss_pred ceEEEeeecccccceeEEEeecch-----hhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCC--
Confidence 477788899999999999985443 45799999987643333 33567999999999999999999998888
Q ss_pred cceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccC
Q 035862 150 GIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGL 229 (393)
Q Consensus 150 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~ 229 (393)
.+|+||+|+.||++-.+|.. .+-+++..++.++..+..|+++.|.. |+|||||||+|||||.+|.|||+|||+
T Consensus 703 --nLYFVMdYIPGGDmMSLLIr--mgIFeE~LARFYIAEltcAiesVHkm---GFIHRDiKPDNILIDrdGHIKLTDFGL 775 (1034)
T KOG0608|consen 703 --NLYFVMDYIPGGDMMSLLIR--MGIFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGL 775 (1034)
T ss_pred --ceEEEEeccCCccHHHHHHH--hccCHHHHHHHHHHHHHHHHHHHHhc---cceecccCccceEEccCCceeeeeccc
Confidence 56999999999999998854 45688999999999999999999998 999999999999999999999999999
Q ss_pred CccCC---------CCCCc-------------------------------cccccccccCCccCccccccCCCCchhhHH
Q 035862 230 AREGP---------TGDHT-------------------------------HVSTAVVGTYGYAAPEYIETGHLKSQSDIW 269 (393)
Q Consensus 230 a~~~~---------~~~~~-------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~Diw 269 (393)
+.-+. .++.. ...-..+||+.|+|||++....|+..+|.|
T Consensus 776 CTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdww 855 (1034)
T KOG0608|consen 776 CTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWW 855 (1034)
T ss_pred cccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhh
Confidence 86221 11000 011256999999999999999999999999
Q ss_pred HHHHHHHHHHhCCCccCCCCchhhh-HHHHHHhhcCcCCcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCC-
Q 035862 270 SFGVVLYEILTGRRVLERNRPTMEQ-KLLEWVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPT- 347 (393)
Q Consensus 270 slGvil~elltg~~pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps- 347 (393)
|.|||||||+.|++||....+...+ .++.|-..+. -.+..+++.++.++|.++ +-+++.|..
T Consensus 856 s~gvil~em~~g~~pf~~~tp~~tq~kv~nw~~~l~---------------~~~~~~ls~e~~~li~kL-c~sad~RLGk 919 (1034)
T KOG0608|consen 856 SVGVILYEMLVGQPPFLADTPGETQYKVINWRNFLH---------------IPYQGNLSKEALDLIQKL-CCSADSRLGK 919 (1034)
T ss_pred HhhHHHHHHhhCCCCccCCCCCcceeeeeehhhccc---------------cccccccCHHHHHHHHHH-hcChhhhhcc
Confidence 9999999999999999887765433 3333332221 122235677888888774 467778863
Q ss_pred --HHHHHHHHH
Q 035862 348 --MNQVVESLK 356 (393)
Q Consensus 348 --~~~~l~~l~ 356 (393)
+++|-.|.+
T Consensus 920 ng~d~vKaHpf 930 (1034)
T KOG0608|consen 920 NGADQVKAHPF 930 (1034)
T ss_pred cchhhhhcCcc
Confidence 455666544
No 389
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=100.00 E-value=9.4e-36 Score=293.35 Aligned_cols=277 Identities=19% Similarity=0.220 Sum_probs=174.2
Q ss_pred HhcCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcccHHHHHHHHHHhhcCCCCccceeeeeeecC--C
Q 035862 70 ATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTE--D 147 (393)
Q Consensus 70 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--~ 147 (393)
..++|++.+.||+|+||.||+|++..+.. ..+..||+|++...... .....+ .+....+.++..+...+... .
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~-~~~~~vAvK~~~~~~~~--e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~ 204 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQS-KKEGKYVLKKATEYGAV--EIWMNE--RVRRACPNSCADFVYGFLEPVSS 204 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCcc-ccCcEEEEEEecccchh--HHHHHH--HHHhhchhhHHHHHHhhhccccc
Confidence 45789999999999999999999865421 23456999987653221 111111 12222233333322221110 0
Q ss_pred cccceEEEEEeecCCCChHHHHhhcCCC------------------CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccC
Q 035862 148 ERGIQRLLVYEYMPNRSLEDRLFSRAQP------------------TLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDF 209 (393)
Q Consensus 148 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~------------------~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Di 209 (393)
......++||||+.+++|.+++...... ......+..++.||+.||.|||+. +|+||||
T Consensus 205 ~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~---gIiHRDL 281 (566)
T PLN03225 205 KKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHST---GIVHRDV 281 (566)
T ss_pred ccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHC---CEEeCcC
Confidence 1122569999999999999988543211 112344667999999999999998 9999999
Q ss_pred CCCCeEeCC-CCceEEeeccCCccCCCCCCccccccccccCCccCccccccC----------------------CCCchh
Q 035862 210 KTSNVLLDG-NFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIETG----------------------HLKSQS 266 (393)
Q Consensus 210 kp~NIll~~-~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----------------------~~~~~~ 266 (393)
||+|||+++ ++.+||+|||++........ .......+++.|+|||.+... .++.++
T Consensus 282 KP~NILl~~~~~~~KL~DFGlA~~l~~~~~-~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~ 360 (566)
T PLN03225 282 KPQNIIFSEGSGSFKIIDLGAAADLRVGIN-YIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRF 360 (566)
T ss_pred CHHHEEEeCCCCcEEEEeCCCccccccccc-cCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCc
Confidence 999999985 58999999999976533222 123456889999999966322 234567
Q ss_pred hHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcCCcccccccCcccccc----c--CHHHHHHHHHHHHHhccc
Q 035862 267 DIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKFSMMIDPRLRNQ----Y--SINAARRVAKLADNCLKK 340 (393)
Q Consensus 267 DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~--~~~~~~~l~~li~~~l~~ 340 (393)
|||||||++|||+++..++...... +.........+-..+.....+..... + .........+|+.+||++
T Consensus 361 DVwSlGviL~el~~~~~~~~~~~~~----~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~ 436 (566)
T PLN03225 361 DIYSAGLIFLQMAFPNLRSDSNLIQ----FNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRF 436 (566)
T ss_pred ccHHHHHHHHHHHhCcCCCchHHHH----HHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccC
Confidence 9999999999999976654322111 11111100000000000001100000 0 001123456899999999
Q ss_pred CCCCCCCHHHHHHHHHHHH
Q 035862 341 NPEERPTMNQVVESLKLAV 359 (393)
Q Consensus 341 dp~~Rps~~~~l~~l~~~~ 359 (393)
||++|||+.++++|.|...
T Consensus 437 dP~kR~ta~e~L~Hpff~~ 455 (566)
T PLN03225 437 KGRQRISAKAALAHPYFDR 455 (566)
T ss_pred CcccCCCHHHHhCCcCcCC
Confidence 9999999999999988754
No 390
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=100.00 E-value=2e-34 Score=277.32 Aligned_cols=273 Identities=19% Similarity=0.224 Sum_probs=185.3
Q ss_pred hcCCcccceecccCCceEEEEEEcCCC-----------CCCCceEEEEEEecCCCcccHHH--------------HHHHH
Q 035862 71 TNGFNRMLKIGEGGFGSVYKGTIRPLD-----------GRGEPLVVAVKKLNNHGLQGHKQ--------------WLAEV 125 (393)
Q Consensus 71 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~-----------~~~~~~~vavK~~~~~~~~~~~~--------------~~~E~ 125 (393)
.++|.+.++||+|+||.||+|.+...+ ....+..||||.+.......... ...|+
T Consensus 144 ~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE~ 223 (507)
T PLN03224 144 SDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVEA 223 (507)
T ss_pred ccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHHH
Confidence 568999999999999999999753322 12344579999986543222222 23466
Q ss_pred HHhhcCCCCc-----cceeeeeeecCCc----ccceEEEEEeecCCCChHHHHhhcC----------------------C
Q 035862 126 QFLGVVSHPN-----LVKLLGYCSTEDE----RGIQRLLVYEYMPNRSLEDRLFSRA----------------------Q 174 (393)
Q Consensus 126 ~~l~~l~h~n-----iv~~~~~~~~~~~----~~~~~~lv~e~~~~~~L~~~l~~~~----------------------~ 174 (393)
.++..++|.+ +++++++|..... .....++||||+.+++|.+++.... .
T Consensus 224 ~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~ 303 (507)
T PLN03224 224 YMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQ 303 (507)
T ss_pred HHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhccc
Confidence 6666676554 4677777654211 1124599999999999999885421 1
Q ss_pred CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCCccCCCCCCccccccccccCCccCc
Q 035862 175 PTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAP 254 (393)
Q Consensus 175 ~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aP 254 (393)
..+++..++.++.|++.+|.|||+. +|+||||||+|||++.++.+||+|||++......... ......+++.|+||
T Consensus 304 ~~~~~~~~~~i~~ql~~aL~~lH~~---~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~-~~~~g~~tp~Y~aP 379 (507)
T PLN03224 304 DKRDINVIKGVMRQVLTGLRKLHRI---GIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINF-NPLYGMLDPRYSPP 379 (507)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCchHhEEECCCCcEEEEeCcCccccccCCcc-CccccCCCcceeCh
Confidence 1245677889999999999999998 9999999999999999999999999999754332211 11223457899999
Q ss_pred cccccCC--------------------C--CchhhHHHHHHHHHHHHhCCC-ccCCCCchhh------hHHHHHHhhcCc
Q 035862 255 EYIETGH--------------------L--KSQSDIWSFGVVLYEILTGRR-VLERNRPTME------QKLLEWVKQFPA 305 (393)
Q Consensus 255 E~~~~~~--------------------~--~~~~DiwslGvil~elltg~~-pf~~~~~~~~------~~~~~~~~~~~~ 305 (393)
|.+.... | ..+.||||+||++|+|++|.. ||........ .....|.. ...
T Consensus 380 E~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~-~~~ 458 (507)
T PLN03224 380 EELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRM-YKG 458 (507)
T ss_pred hhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHh-hcc
Confidence 9875332 1 124799999999999999875 6643211100 01111110 000
Q ss_pred CCcccccccCcccccccCHHHHHHHHHHHHHhcccCC---CCCCCHHHHHHHHHHH
Q 035862 306 DGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNP---EERPTMNQVVESLKLA 358 (393)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp---~~Rps~~~~l~~l~~~ 358 (393)
....-......++...+|+.+||..+| .+|+|++++++|.|..
T Consensus 459 ----------~~~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~Hp~f~ 504 (507)
T PLN03224 459 ----------QKYDFSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSHRFFL 504 (507)
T ss_pred ----------cCCCcccccccChHHHHHHHHHhccCCCCcccCCCHHHHhCCCCcC
Confidence 000001112346889999999999866 6899999999998864
No 391
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.6e-35 Score=254.50 Aligned_cols=253 Identities=25% Similarity=0.411 Sum_probs=198.8
Q ss_pred hcCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCC---CcccHHHHHHHHHHhhcC-CCCccceeeeeeecC
Q 035862 71 TNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNH---GLQGHKQWLAEVQFLGVV-SHPNLVKLLGYCSTE 146 (393)
Q Consensus 71 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~ 146 (393)
.++|..+++||+|+|+.|-++++..++ +.+|+|++++. ......-...|-.+..+. +||.+|.+..+|.++
T Consensus 249 l~df~ll~vigrgsyakvl~~~~~~t~-----qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqte 323 (593)
T KOG0695|consen 249 LQDFDLLRVIGRGSYAKVLLVRLKKTD-----QIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTE 323 (593)
T ss_pred cccceeeeeecCcchhhhhheehcccc-----eeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhccc
Confidence 578999999999999999999876555 47999998764 223333445566666665 599999999999888
Q ss_pred CcccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEee
Q 035862 147 DERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSD 226 (393)
Q Consensus 147 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~D 226 (393)
. .+++|.||++||+|--.+ ..+..+|++.++.+...|+.||.|||+. ||++||||.+|+|++..|.+||+|
T Consensus 324 s----rlffvieyv~ggdlmfhm--qrqrklpeeharfys~ei~lal~flh~r---giiyrdlkldnvlldaeghikltd 394 (593)
T KOG0695|consen 324 S----RLFFVIEYVNGGDLMFHM--QRQRKLPEEHARFYSAEICLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTD 394 (593)
T ss_pred c----eEEEEEEEecCcceeeeh--hhhhcCcHHHhhhhhHHHHHHHHHHhhc---CeeeeeccccceEEccCCceeecc
Confidence 7 669999999999997655 4566799999999999999999999998 999999999999999999999999
Q ss_pred ccCCccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCC-----chhhhHHHHHHh
Q 035862 227 FGLAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNR-----PTMEQKLLEWVK 301 (393)
Q Consensus 227 fg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~-----~~~~~~~~~~~~ 301 (393)
+|+++....... ..+..+|||.|.|||.+.+..|...+|.|+|||+++||+.|+.||+--. ...+.-+...
T Consensus 395 ygmcke~l~~gd--~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqv-- 470 (593)
T KOG0695|consen 395 YGMCKEGLGPGD--TTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQV-- 470 (593)
T ss_pred cchhhcCCCCCc--ccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHH--
Confidence 999986443332 3567899999999999999999999999999999999999999995321 1111111111
Q ss_pred hcCcCCcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCC------HHHHHHH
Q 035862 302 QFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPT------MNQVVES 354 (393)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps------~~~~l~~ 354 (393)
++.+.++ .+..++-.+..+++..|++||.+|.. +.++-.|
T Consensus 471 -----------ilekqir--iprslsvkas~vlkgflnkdp~erlgc~~~~g~~dik~h 516 (593)
T KOG0695|consen 471 -----------ILEKQIR--IPRSLSVKASHVLKGFLNKDPKERLGCRPQTGFSDIKSH 516 (593)
T ss_pred -----------Hhhhccc--ccceeehhhHHHHHHhhcCCcHHhcCCCcccchhhhhcc
Confidence 1122221 22234556778999999999999964 4555554
No 392
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-36 Score=255.94 Aligned_cols=273 Identities=25% Similarity=0.345 Sum_probs=202.8
Q ss_pred CcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCC--CcccHHHHHHHHHHhhcCCCCccceeeeeeecCCcc-c
Q 035862 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNH--GLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDER-G 150 (393)
Q Consensus 74 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~-~ 150 (393)
.+-.+.||-|+||.||.+.+.. +++.|++|++..- ....-+.+.+|+++|..++|.|++..+++..-.... .
T Consensus 55 i~PDRPIGYGAFGVVWsVTDPR-----dgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfF 129 (449)
T KOG0664|consen 55 IQPDRPIGYGAFGVVWSVTDPR-----SGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFF 129 (449)
T ss_pred CCCCCcccccceeEEEeccCCC-----CccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHH
Confidence 3445679999999999998654 3445999988643 333456788999999999999999998876543321 1
Q ss_pred ceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCC
Q 035862 151 IQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLA 230 (393)
Q Consensus 151 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a 230 (393)
..+|.++|.+.. +|...| .....++...+.-+++||++||.|||+. +|.||||||+|+|++.|..+||||||++
T Consensus 130 qEiYV~TELmQS-DLHKII--VSPQ~Ls~DHvKVFlYQILRGLKYLHsA---~ILHRDIKPGNLLVNSNCvLKICDFGLA 203 (449)
T KOG0664|consen 130 QELYVLTELMQS-DLHKII--VSPQALTPDHVKVFVYQILRGLKYLHTA---NILHRDIKPGNLLVNSNCILKICDFGLA 203 (449)
T ss_pred HHHHHHHHHHHh-hhhhee--ccCCCCCcchhhhhHHHHHhhhHHHhhc---chhhccCCCccEEeccCceEEecccccc
Confidence 234778888844 888877 4556688889999999999999999999 9999999999999999999999999999
Q ss_pred ccCCCCCCccccccccccCCccCcccccc-CCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcC---
Q 035862 231 REGPTGDHTHVSTAVVGTYGYAAPEYIET-GHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPAD--- 306 (393)
Q Consensus 231 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~--- 306 (393)
+.....+. ...+..+-|..|+|||++.| ..|+.++||||+|||+.||+..+..|....+-.+..++..+...|..
T Consensus 204 Rvee~d~~-~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaM 282 (449)
T KOG0664|consen 204 RTWDQRDR-LNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAM 282 (449)
T ss_pred cccchhhh-hhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHH
Confidence 97644433 34556678999999999977 57999999999999999999999999887775554443322222211
Q ss_pred -----CcccccccC----cccc----cccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q 035862 307 -----GKKFSMMID----PRLR----NQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLA 358 (393)
Q Consensus 307 -----~~~~~~~~~----~~~~----~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~ 358 (393)
|-+...+.. +.+. ...+.....+...++..++..||+.|.+..+.+.++..-
T Consensus 283 r~ACEGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~~~ 347 (449)
T KOG0664|consen 283 KYACEGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRYLE 347 (449)
T ss_pred HHHhhhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhccccccc
Confidence 111111100 0000 001112335677889999999999999999999987653
No 393
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=100.00 E-value=1.4e-33 Score=250.55 Aligned_cols=242 Identities=31% Similarity=0.435 Sum_probs=191.4
Q ss_pred CCceEEEEEEcCCCCCCCceEEEEEEecCCCccc-HHHHHHHHHHhhcCCCCccceeeeeeecCCcccceEEEEEeecCC
Q 035862 84 GFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQG-HKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPN 162 (393)
Q Consensus 84 ~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv~e~~~~ 162 (393)
+||.||+|.... .+..+++|.+....... ...+.+|++.++.++|+|++++++++.... ..++++||+.+
T Consensus 1 ~~g~v~~~~~~~-----~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~----~~~l~~e~~~~ 71 (244)
T smart00220 1 SFGKVYLARDKK-----TGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDED----KLYLVMEYCDG 71 (244)
T ss_pred CceEEEEEEECC-----CCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCC----EEEEEEeCCCC
Confidence 589999999754 23469999987665444 677889999999999999999999988765 55999999999
Q ss_pred CChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCCccCCCCCCcccc
Q 035862 163 RSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVS 242 (393)
Q Consensus 163 ~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~ 242 (393)
++|.+++.... .+++..++.++.+++.++.+||+. +++|+||+|.||++++++.++|+|||.+....... ..
T Consensus 72 ~~L~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~---~~ 143 (244)
T smart00220 72 GDLFDLLKKRG--RLSEDEARFYARQILSALEYLHSN---GIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG---LL 143 (244)
T ss_pred CCHHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHHHc---CeecCCcCHHHeEECCCCcEEEccccceeeecccc---cc
Confidence 99999985433 388999999999999999999998 99999999999999999999999999998754432 22
Q ss_pred ccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcCCcccccccCccccccc
Q 035862 243 TAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKFSMMIDPRLRNQY 322 (393)
Q Consensus 243 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (393)
....++..|++||.+.+..++.++||||||+++|+|++|..||...... .............. ...
T Consensus 144 ~~~~~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~--~~~~~~~~~~~~~~------------~~~ 209 (244)
T smart00220 144 TTFVGTPEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQL--LELFKKIGKPKPPF------------PPP 209 (244)
T ss_pred ccccCCcCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcH--HHHHHHHhccCCCC------------ccc
Confidence 3456788999999998888999999999999999999999999753211 11111111110000 000
Q ss_pred CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 035862 323 SINAARRVAKLADNCLKKNPEERPTMNQVVESLK 356 (393)
Q Consensus 323 ~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~ 356 (393)
...++.++.+++.+||..+|++||++.+++++.+
T Consensus 210 ~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~~~~~~ 243 (244)
T smart00220 210 EWKISPEAKDLIRKLLVKDPEKRLTAEEALQHPF 243 (244)
T ss_pred cccCCHHHHHHHHHHccCCchhccCHHHHhhCCC
Confidence 0004578999999999999999999999998643
No 394
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-34 Score=236.26 Aligned_cols=210 Identities=25% Similarity=0.353 Sum_probs=169.0
Q ss_pred HhcCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCC-CcccHHHHHHHHHHhhcC-CCCccceeeeeeecCC
Q 035862 70 ATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNH-GLQGHKQWLAEVQFLGVV-SHPNLVKLLGYCSTED 147 (393)
Q Consensus 70 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~ 147 (393)
..+....+..||+|++|.|-+.++. .++.+.|+|.+... ..+..++.++|+.+.... ..|.+|.+||.+..+.
T Consensus 44 ~ad~L~~i~elGrGayG~vekmrh~-----~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~reg 118 (282)
T KOG0984|consen 44 PADDLVGIEELGRGAYGVVEKMRHI-----QSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREG 118 (282)
T ss_pred chhhhhhhhhhcCCccchhhheeec-----cCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccc
Confidence 3445666678999999999877754 35568999998764 334566778888876664 5999999999877666
Q ss_pred cccceEEEEEeecCCCChHHHHhh--cCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEe
Q 035862 148 ERGIQRLLVYEYMPNRSLEDRLFS--RAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLS 225 (393)
Q Consensus 148 ~~~~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~ 225 (393)
. .++.||.|+ .+|..+-.. .....+++..+-+|+..+++||.|||++ ..++|||+||+||||+.+|++|+|
T Consensus 119 d----vwIcME~M~-tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~k--L~vIHRDvKPsNiLIn~~GqVKiC 191 (282)
T KOG0984|consen 119 D----VWICMELMD-TSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSK--LSVIHRDVKPSNILINYDGQVKIC 191 (282)
T ss_pred c----EEEeHHHhh-hhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHH--hhhhhccCCcceEEEccCCcEEEc
Confidence 4 388999994 488776532 3567799999999999999999999997 689999999999999999999999
Q ss_pred eccCCccCCCCCCccccccccccCCccCcccccc----CCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhh
Q 035862 226 DFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIET----GHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQ 294 (393)
Q Consensus 226 Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~ 294 (393)
|||.+..+.+.- ..+...|-..|||||.+.. ..|+.++||||||+++.||.+++.||+......++
T Consensus 192 DFGIsG~L~dSi---Akt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~tpF~q 261 (282)
T KOG0984|consen 192 DFGISGYLVDSI---AKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGTPFQQ 261 (282)
T ss_pred ccccceeehhhh---HHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCCHHHH
Confidence 999998764432 2233567889999998843 47999999999999999999999999876554443
No 395
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=100.00 E-value=1.4e-34 Score=264.07 Aligned_cols=278 Identities=23% Similarity=0.300 Sum_probs=208.0
Q ss_pred ccHHHHHHHhcCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcccHHHHHHHHHHhhcCCC------Cc
Q 035862 62 FDMQELREATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSH------PN 135 (393)
Q Consensus 62 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h------~n 135 (393)
|...--+..-++|.+....|+|-|++|..|.+...+. .||||++.... ...+.=+.|++||+.|+. -|
T Consensus 422 Yrv~igE~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~-----~vAiKIIRnNE-~M~KtGl~EleiLkKL~~AD~Edk~H 495 (752)
T KOG0670|consen 422 YRVRIGELLDSRYEVQGYTGKGVFSTVVRARDQARGQ-----EVAIKIIRNNE-VMHKTGLKELEILKKLNDADPEDKFH 495 (752)
T ss_pred EEEehhhhhcceeEEEeccccceeeeeeeccccCCCC-----eeEEEEeecch-HHhhhhhHHHHHHHHhhccCchhhhH
Confidence 3333334455789999999999999999998654333 69999998754 334455689999999862 47
Q ss_pred cceeeeeeecCCcccceEEEEEeecCCCChHHHHhhc-CCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCe
Q 035862 136 LVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSR-AQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNV 214 (393)
Q Consensus 136 iv~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NI 214 (393)
++.++..|...+ ++|||+|-+ ..+|.+.|... .+-++....+..++.|+..||..|-.. ||+|.||||+||
T Consensus 496 clrl~r~F~hkn----HLClVFE~L-slNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c---~vlHaDIKPDNi 567 (752)
T KOG0670|consen 496 CLRLFRHFKHKN----HLCLVFEPL-SLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKC---GVLHADIKPDNI 567 (752)
T ss_pred HHHHHHHhhhcc----eeEEEehhh-hchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhc---CeeecccCccce
Confidence 899988887776 789999999 66999998543 345688899999999999999999987 999999999999
Q ss_pred EeCCCC-ceEEeeccCCccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhh
Q 035862 215 LLDGNF-KPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTME 293 (393)
Q Consensus 215 ll~~~~-~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~ 293 (393)
||++.. .+||||||.|......+. +.+.-+..|.|||++.|..|+...|+||+||+||||.||+..|++......
T Consensus 568 LVNE~k~iLKLCDfGSA~~~~enei----tPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~M 643 (752)
T KOG0670|consen 568 LVNESKNILKLCDFGSASFASENEI----TPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQM 643 (752)
T ss_pred EeccCcceeeeccCccccccccccc----cHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHH
Confidence 998774 589999999987655443 345567799999999999999999999999999999999999987655433
Q ss_pred hHH-HHHHhhcCcC---------------------------Ccc-cccc--cCc------cccc--ccC---HHHHHHHH
Q 035862 294 QKL-LEWVKQFPAD---------------------------GKK-FSMM--IDP------RLRN--QYS---INAARRVA 331 (393)
Q Consensus 294 ~~~-~~~~~~~~~~---------------------------~~~-~~~~--~~~------~~~~--~~~---~~~~~~l~ 331 (393)
..+ .+....+|-. +.. ...+ +.+ .+.. .++ ...-.++.
T Consensus 644 Lrl~me~KGk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~r 723 (752)
T KOG0670|consen 644 LRLFMELKGKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLR 723 (752)
T ss_pred HHHHHHhcCCCcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHH
Confidence 222 2211111110 000 0000 000 0000 011 23456789
Q ss_pred HHHHHhcccCCCCCCCHHHHHHHHHH
Q 035862 332 KLADNCLKKNPEERPTMNQVVESLKL 357 (393)
Q Consensus 332 ~li~~~l~~dp~~Rps~~~~l~~l~~ 357 (393)
+|+.+||..||++|.|+.++|.|+..
T Consensus 724 dLLdkml~LdP~KRit~nqAL~HpFi 749 (752)
T KOG0670|consen 724 DLLDKMLILDPEKRITVNQALKHPFI 749 (752)
T ss_pred HHHHHHhccChhhcCCHHHHhcCCcc
Confidence 99999999999999999999998754
No 396
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-33 Score=243.13 Aligned_cols=269 Identities=25% Similarity=0.318 Sum_probs=197.8
Q ss_pred cCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCC--CcccHHHHHHHHHHhhcCCCCccceeeeeeecCCcc
Q 035862 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNH--GLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDER 149 (393)
Q Consensus 72 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 149 (393)
.+|..++.+|.|.- .|..|.+.- ....|++|++... .....++..+|...+..++|+||++++.+|.-....
T Consensus 17 ~Ry~nL~p~~~g~~-~v~~a~D~v-----~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l 90 (369)
T KOG0665|consen 17 KRYVNLKPIGSGAQ-IVVAAFDQV-----LGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTL 90 (369)
T ss_pred eeeeeecccCCCCc-eEEecchhh-----ccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccH
Confidence 46888888999987 666665433 3345999987654 223456678999999999999999999998643321
Q ss_pred --cceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeec
Q 035862 150 --GIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDF 227 (393)
Q Consensus 150 --~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Df 227 (393)
....|+|||++ ..+|...+. -.++-..+..++.|++.|+.|||+. ||+||||||+||++..++.+||.||
T Consensus 91 ~~~~e~y~v~e~m-~~nl~~vi~----~elDH~tis~i~yq~~~~ik~lhs~---~IihRdLkPsnivv~~~~~lKi~df 162 (369)
T KOG0665|consen 91 EEFQEVYLVMELM-DANLCQVIL----MELDHETISYILYQMLCGIKHLHSA---GIIHRDLKPSNIVVNSDCTLKILDF 162 (369)
T ss_pred HHHHhHHHHHHhh-hhHHHHHHH----HhcchHHHHHHHHHHHHHHHHHHhc---ceeecccCcccceecchhheeeccc
Confidence 12348999999 559988874 3466778899999999999999999 9999999999999999999999999
Q ss_pred cCCccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhh--------------
Q 035862 228 GLAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTME-------------- 293 (393)
Q Consensus 228 g~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~-------------- 293 (393)
|+|+..... ...+..+.+..|.|||++.+..|...+||||+||++.||++|...|.+...-.+
T Consensus 163 g~ar~e~~~---~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~ 239 (369)
T KOG0665|consen 163 GLARTEDTD---FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPS 239 (369)
T ss_pred hhhcccCcc---cccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHH
Confidence 999864332 355678999999999999998899999999999999999999999975422111
Q ss_pred --hHHHHHHhhcCcC-----CcccccccCcc-cccc--cCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 035862 294 --QKLLEWVKQFPAD-----GKKFSMMIDPR-LRNQ--YSINAARRVAKLADNCLKKNPEERPTMNQVVESLKL 357 (393)
Q Consensus 294 --~~~~~~~~~~~~~-----~~~~~~~~~~~-~~~~--~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~ 357 (393)
..+....+.+..+ +..+.+.+... .+.. .+.--+..+.+++.+||..||++|.|++++|.|+..
T Consensus 240 F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~HPY~ 313 (369)
T KOG0665|consen 240 FMKQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRHPYI 313 (369)
T ss_pred HHHHhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcCCee
Confidence 1111111111110 01112211111 1111 111224567899999999999999999999999754
No 397
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=100.00 E-value=6.3e-34 Score=273.17 Aligned_cols=245 Identities=25% Similarity=0.352 Sum_probs=182.4
Q ss_pred ccceecccCCce-EEEEEEcCCCCCCCceEEEEEEecCCCcccHHHHHHHHHHhhcCC-CCccceeeeeeecCCcccceE
Q 035862 76 RMLKIGEGGFGS-VYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVS-HPNLVKLLGYCSTEDERGIQR 153 (393)
Q Consensus 76 ~~~~lg~G~~g~-Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~ 153 (393)
-.+.+|.|+-|+ ||+|.+.. +.||||.+-... ...+.+|+..|+.-. |||||++++.-.+.. ++
T Consensus 513 ~~eilG~Gs~Gt~Vf~G~ye~-------R~VAVKrll~e~---~~~A~rEi~lL~eSD~H~NviRyyc~E~d~q----F~ 578 (903)
T KOG1027|consen 513 PKEILGYGSNGTVVFRGVYEG-------REVAVKRLLEEF---FDFAQREIQLLQESDEHPNVIRYYCSEQDRQ----FL 578 (903)
T ss_pred cHHHcccCCCCcEEEEEeeCC-------ceehHHHHhhHh---HHHHHHHHHHHHhccCCCceEEEEeeccCCc----eE
Confidence 334688998875 79998642 359999886533 345678999999886 999999975544333 77
Q ss_pred EEEEeecCCCChHHHHhhc--CCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCC---C--CceEEee
Q 035862 154 LLVYEYMPNRSLEDRLFSR--AQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDG---N--FKPKLSD 226 (393)
Q Consensus 154 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~---~--~~~kl~D 226 (393)
|+..|.| ..+|.+++... ..........+....|+++||++||+. +||||||||.||||+. + ..++|+|
T Consensus 579 YIalELC-~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl---~iVHRDLkPQNILI~~~~~~~~~ra~iSD 654 (903)
T KOG1027|consen 579 YIALELC-ACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSL---KIVHRDLKPQNILISVPSADGTLRAKISD 654 (903)
T ss_pred EEEehHh-hhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhc---ccccccCCCceEEEEccCCCcceeEEecc
Confidence 9999999 55999999653 111111134578899999999999998 9999999999999965 3 4689999
Q ss_pred ccCCccCCCCCCc-cccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhC-CCccCCCCchhhhHHHHHHhhcC
Q 035862 227 FGLAREGPTGDHT-HVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTG-RRVLERNRPTMEQKLLEWVKQFP 304 (393)
Q Consensus 227 fg~a~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg-~~pf~~~~~~~~~~~~~~~~~~~ 304 (393)
||+++....+... .......||.+|+|||++....-+.++|||||||++|+.++| .+||.+........+
T Consensus 655 fglsKkl~~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~NIl-------- 726 (903)
T KOG1027|consen 655 FGLSKKLAGGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQANIL-------- 726 (903)
T ss_pred cccccccCCCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhhhhhh--------
Confidence 9999987654332 234567899999999999988888899999999999998886 899986532211110
Q ss_pred cCCcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 035862 305 ADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESL 355 (393)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l 355 (393)
.....+.. .....++ ++.+||.+|++++|..||++.+++.|+
T Consensus 727 ~~~~~L~~-------L~~~~d~--eA~dLI~~ml~~dP~~RPsa~~VL~HP 768 (903)
T KOG1027|consen 727 TGNYTLVH-------LEPLPDC--EAKDLISRMLNPDPQLRPSATDVLNHP 768 (903)
T ss_pred cCccceee-------eccCchH--HHHHHHHHhcCCCcccCCCHHHHhCCC
Confidence 00000000 0001111 789999999999999999999999984
No 398
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.97 E-value=1.1e-32 Score=258.53 Aligned_cols=255 Identities=24% Similarity=0.324 Sum_probs=203.5
Q ss_pred hcCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcccHHHHHHHHHHhhcCCCCccceeeeeeecCCccc
Q 035862 71 TNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERG 150 (393)
Q Consensus 71 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 150 (393)
.++|..+..+|.|++|.||++++..++ ...|+|+++-.......-..+|+-+++..+||||+.+++.+...+.
T Consensus 14 ~ddyellqrvgsgTygdvyKaRd~~s~-----elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dk-- 86 (829)
T KOG0576|consen 14 QDDYELLQRVGSGTYGDVYKARDKRSG-----ELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDK-- 86 (829)
T ss_pred ccchhheeeecCCcccchhhhcccccC-----chhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcC--
Confidence 467999999999999999999975444 4689998887666666777889999999999999999999988874
Q ss_pred ceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCC
Q 035862 151 IQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLA 230 (393)
Q Consensus 151 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a 230 (393)
+++.||||.||+|++.- ...+.+++.++....+..+.||+|||+. |=+|||||-.|||+++.|.+|++|||.+
T Consensus 87 --lwicMEycgggslQdiy--~~TgplselqiayvcRetl~gl~ylhs~---gk~hRdiKGanilltd~gDvklaDfgvs 159 (829)
T KOG0576|consen 87 --LWICMEYCGGGSLQDIY--HVTGPLSELQIAYVCRETLQGLKYLHSQ---GKIHRDIKGANILLTDEGDVKLADFGVS 159 (829)
T ss_pred --cEEEEEecCCCccccee--eecccchhHHHHHHHhhhhccchhhhcC---CcccccccccceeecccCceeecccCch
Confidence 49999999999999865 4456789999999999999999999998 9999999999999999999999999998
Q ss_pred ccCCCCCCccccccccccCCccCcccc---ccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcCC
Q 035862 231 REGPTGDHTHVSTAVVGTYGYAAPEYI---ETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADG 307 (393)
Q Consensus 231 ~~~~~~~~~~~~~~~~gt~~y~aPE~~---~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 307 (393)
......-. ....+.||+.|||||+. ..+.|.+.+|||++|++..|+-..++|..+.-+-... ..+..--++.
T Consensus 160 aqitati~--KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l---~LmTkS~~qp 234 (829)
T KOG0576|consen 160 AQITATIA--KRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRAL---FLMTKSGFQP 234 (829)
T ss_pred hhhhhhhh--hhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHH---HHhhccCCCC
Confidence 75433221 33567999999999976 4578999999999999999999888876543221111 1111100000
Q ss_pred cccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 035862 308 KKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVES 354 (393)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~ 354 (393)
....-....++.+.+|++.+|.++|++||+++.++.|
T Consensus 235 ----------p~lkDk~kws~~fh~fvK~altknpKkRptaeklL~h 271 (829)
T KOG0576|consen 235 ----------PTLKDKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQH 271 (829)
T ss_pred ----------CcccCCccchHHHHHHHHHHhcCCCccCCChhhheec
Confidence 0111122356789999999999999999999999886
No 399
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.97 E-value=3.2e-32 Score=251.57 Aligned_cols=198 Identities=27% Similarity=0.403 Sum_probs=168.0
Q ss_pred hcCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcc--------cHHHHHHHHHHhhcCC---CCcccee
Q 035862 71 TNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQ--------GHKQWLAEVQFLGVVS---HPNLVKL 139 (393)
Q Consensus 71 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~--------~~~~~~~E~~~l~~l~---h~niv~~ 139 (393)
..+|..++.+|.|+||.|++|.++.. ...|++|.+.+...- .....-.|++||..++ |+||+++
T Consensus 560 ~s~yttlq~lG~GAyGkV~lai~K~n-----~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKl 634 (772)
T KOG1152|consen 560 FSDYTTLQPLGEGAYGKVNLAIHKEN-----NYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKL 634 (772)
T ss_pred cccceeeeeccccccceEEEeeeccc-----ceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhh
Confidence 45699999999999999999997533 457999998775321 1112346999999998 9999999
Q ss_pred eeeeecCCcccceEEEEEeec-CCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCC
Q 035862 140 LGYCSTEDERGIQRLLVYEYM-PNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDG 218 (393)
Q Consensus 140 ~~~~~~~~~~~~~~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~ 218 (393)
+++|.+++ +.||+||-- +|-+|.++| .-.+.+.+..+..|+.|++.|+++||++ ||||||||-+|+.++.
T Consensus 635 LdfFEddd----~yyl~te~hg~gIDLFd~I--E~kp~m~E~eAk~IFkQV~agi~hlh~~---~ivhrdikdenvivd~ 705 (772)
T KOG1152|consen 635 LDFFEDDD----YYYLETEVHGEGIDLFDFI--EFKPRMDEPEAKLIFKQVVAGIKHLHDQ---GIVHRDIKDENVIVDS 705 (772)
T ss_pred hheeecCC----eeEEEecCCCCCcchhhhh--hccCccchHHHHHHHHHHHhcccccccc---CceecccccccEEEec
Confidence 99999888 458999865 566899998 4556799999999999999999999999 9999999999999999
Q ss_pred CCceEEeeccCCccCCCCCCccccccccccCCccCccccccCCCC-chhhHHHHHHHHHHHHhCCCccC
Q 035862 219 NFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLK-SQSDIWSFGVVLYEILTGRRVLE 286 (393)
Q Consensus 219 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DiwslGvil~elltg~~pf~ 286 (393)
+|-+||+|||.+.....+. ...++||..|.|||++.|..|- ..-|||+||++||.++....||.
T Consensus 706 ~g~~klidfgsaa~~ksgp----fd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 706 NGFVKLIDFGSAAYTKSGP----FDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred CCeEEEeeccchhhhcCCC----cceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence 9999999999997654443 4568999999999999998774 55899999999999999988875
No 400
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.97 E-value=3.4e-30 Score=223.47 Aligned_cols=212 Identities=39% Similarity=0.618 Sum_probs=179.3
Q ss_pred ecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcc-cHHHHHHHHHHhhcCCCCccceeeeeeecCCcccceEEEEEe
Q 035862 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQ-GHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYE 158 (393)
Q Consensus 80 lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv~e 158 (393)
||+|++|.||++.... .+..+++|........ ....+.+|+..++.+.|++++++++++.... ..+++||
T Consensus 1 l~~g~~~~v~~~~~~~-----~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~----~~~~~~e 71 (215)
T cd00180 1 LGEGGFGTVYLARDKK-----TGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDEN----HLYLVME 71 (215)
T ss_pred CCcCCceEEEEEEecC-----CCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCC----eEEEEEe
Confidence 6899999999998653 2345999998765432 3467889999999999999999999998764 5599999
Q ss_pred ecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCC-CCceEEeeccCCccCCCCC
Q 035862 159 YMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDG-NFKPKLSDFGLAREGPTGD 237 (393)
Q Consensus 159 ~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~-~~~~kl~Dfg~a~~~~~~~ 237 (393)
|+.+++|.+++.... ..++...++.++.+++.++.+||+. +++|+||+|.||+++. ++.++|+|||.+.......
T Consensus 72 ~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~~---~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~ 147 (215)
T cd00180 72 YCEGGSLKDLLKENE-GKLSEDEILRILLQILEGLEYLHSN---GIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDK 147 (215)
T ss_pred cCCCCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCc
Confidence 999899999985432 4588999999999999999999998 9999999999999999 8999999999997654332
Q ss_pred CccccccccccCCccCccccccC-CCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcCCcccccccCc
Q 035862 238 HTHVSTAVVGTYGYAAPEYIETG-HLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKFSMMIDP 316 (393)
Q Consensus 238 ~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (393)
. ......+...|++||.+... .++.++|+|++|+++++|
T Consensus 148 ~--~~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l-------------------------------------- 187 (215)
T cd00180 148 S--LLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL-------------------------------------- 187 (215)
T ss_pred c--hhhcccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH--------------------------------------
Confidence 1 12335678899999999877 888999999999999999
Q ss_pred ccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 035862 317 RLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESL 355 (393)
Q Consensus 317 ~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l 355 (393)
..+.+++..|++.+|.+||++.++++++
T Consensus 188 -----------~~~~~~l~~~l~~~p~~R~~~~~l~~~~ 215 (215)
T cd00180 188 -----------PELKDLIRKMLQKDPEKRPSAKEILEHL 215 (215)
T ss_pred -----------HHHHHHHHHHhhCCcccCcCHHHHhhCC
Confidence 3467899999999999999999998764
No 401
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.3e-31 Score=226.84 Aligned_cols=257 Identities=20% Similarity=0.362 Sum_probs=187.8
Q ss_pred HhcCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcccHHHHHHHHHHhhcCC-CCccceeeee-eecCC
Q 035862 70 ATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVS-HPNLVKLLGY-CSTED 147 (393)
Q Consensus 70 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~-~~~~~ 147 (393)
..+.|.+.+.||+|.||.+-++.++... ..+++|-+...- .....|.+|...--.+. |.||+.-|++ |...+
T Consensus 22 l~d~y~I~k~lgeG~FgkIlL~eHr~s~-----t~ivlKavp~p~-tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d 95 (378)
T KOG1345|consen 22 LEDVYTINKQLGEGRFGKILLAEHRQSK-----TRIVLKAVPRPQ-TTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSD 95 (378)
T ss_pred hhhhhhHHHHhcccceeeEEeeeccCCc-----eEEEeeccCcch-hhHHHHHHHhccceeeccchhhhHHHHHHhhcCc
Confidence 3567999999999999999999976544 458999887653 45677889988776676 8999988765 44444
Q ss_pred cccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeC--CCCceEEe
Q 035862 148 ERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLD--GNFKPKLS 225 (393)
Q Consensus 148 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~--~~~~~kl~ 225 (393)
..++++||++.|+|.+-+ ...++-+.....++.|+++|+.|+|++ ++||||||.+||||- +...+|||
T Consensus 96 ----~YvF~qE~aP~gdL~snv---~~~GigE~~~K~v~~ql~SAi~fMHsk---nlVHRdlK~eNiLif~~df~rvKlc 165 (378)
T KOG1345|consen 96 ----AYVFVQEFAPRGDLRSNV---EAAGIGEANTKKVFAQLLSAIEFMHSK---NLVHRDLKAENILIFDADFYRVKLC 165 (378)
T ss_pred ----eEEEeeccCccchhhhhc---CcccccHHHHHHHHHHHHHHHHHhhcc---chhhcccccceEEEecCCccEEEee
Confidence 448899999999998766 345688889999999999999999999 999999999999993 34579999
Q ss_pred eccCCccCCCCCCccccccccccCCccCccccccC-----CCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHH
Q 035862 226 DFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIETG-----HLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWV 300 (393)
Q Consensus 226 Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~ 300 (393)
|||+++..+..- .....+..|.+||+.... ...+.+|||.||+++|.++||+.||.... ..++-..+|.
T Consensus 166 DFG~t~k~g~tV-----~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~-~~d~~Y~~~~ 239 (378)
T KOG1345|consen 166 DFGLTRKVGTTV-----KYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKAS-IMDKPYWEWE 239 (378)
T ss_pred ecccccccCcee-----hhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhh-ccCchHHHHH
Confidence 999997643321 223446679999977432 34678999999999999999999998432 2233333333
Q ss_pred hhcCcCCcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCC---CCHHHHHHHHHH
Q 035862 301 KQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEER---PTMNQVVESLKL 357 (393)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R---ps~~~~l~~l~~ 357 (393)
.-...-..... +.. ...++.+..+.++-|..++++| .+++...+.+|.
T Consensus 240 ~w~~rk~~~~P----~~F-----~~fs~~a~r~Fkk~lt~~~~drcki~~~kk~rk~~w~ 290 (378)
T KOG1345|consen 240 QWLKRKNPALP----KKF-----NPFSEKALRLFKKSLTPRFKDRCKIWTAKKMRKCLWK 290 (378)
T ss_pred HHhcccCccCc----hhh-----cccCHHHHHHHHHhcCCcccccchhHHHHHHHHHHHH
Confidence 21111000000 000 1245778889999999999999 555555555554
No 402
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.97 E-value=1.2e-31 Score=240.16 Aligned_cols=274 Identities=26% Similarity=0.349 Sum_probs=201.3
Q ss_pred HHHHhcCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcccHHHHHHHHHHhhcCC-CCccceeeeeeec
Q 035862 67 LREATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVS-HPNLVKLLGYCST 145 (393)
Q Consensus 67 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~ 145 (393)
+....+.|..+.+||+|+|++||++.+... ......||+|.+...+. ..+..+|+++|..+. +.||+++.+++..
T Consensus 31 ~p~~~~~~~~v~kigeGsFssv~~a~~~~~--~~~~~~valk~i~~ts~--p~ri~~El~~L~~~gG~~ni~~~~~~~rn 106 (418)
T KOG1167|consen 31 IPFISNAYKVVNKIGEGSFSSVYKATDIEQ--DTKRRYVALKAIYRTSS--PSRILNELEMLYRLGGSDNIIKLNGCFRN 106 (418)
T ss_pred hhhhhhhhhhhccccccchhhhhhhhHhhh--ccccceEeeeecccccC--chHHHHHHHHHHHhccchhhhcchhhhcc
Confidence 445567799999999999999999987652 33556799999987643 456889999999987 9999999999988
Q ss_pred CCcccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCC-CceEE
Q 035862 146 EDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGN-FKPKL 224 (393)
Q Consensus 146 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~-~~~kl 224 (393)
.+ +.++|+||++.....++. ..++...+..+++.++.||.++|.+ |||||||||.|+|.+.. +.-.|
T Consensus 107 nd----~v~ivlp~~~H~~f~~l~-----~~l~~~~i~~Yl~~ll~Al~~~h~~---GIvHRDiKpsNFL~n~~t~rg~L 174 (418)
T KOG1167|consen 107 ND----QVAIVLPYFEHDRFRDLY-----RSLSLAEIRWYLRNLLKALAHLHKN---GIVHRDIKPSNFLYNRRTQRGVL 174 (418)
T ss_pred CC----eeEEEecccCccCHHHHH-----hcCCHHHHHHHHHHHHHHhhhhhcc---CccccCCCccccccccccCCceE
Confidence 88 459999999999988887 3466888999999999999999999 99999999999999754 67899
Q ss_pred eeccCCccC-----------------CC-CCC------------------------ccccccccccCCccCcccccc-CC
Q 035862 225 SDFGLAREG-----------------PT-GDH------------------------THVSTAVVGTYGYAAPEYIET-GH 261 (393)
Q Consensus 225 ~Dfg~a~~~-----------------~~-~~~------------------------~~~~~~~~gt~~y~aPE~~~~-~~ 261 (393)
+|||+|... .. ... ........||++|.|||++.. ..
T Consensus 175 vDFgLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~ 254 (418)
T KOG1167|consen 175 VDFGLAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPR 254 (418)
T ss_pred EechhHHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccC
Confidence 999998610 00 000 001124589999999998854 66
Q ss_pred CCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHH----------HHHhhcCc-----CCc----------ccccc---
Q 035862 262 LKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLL----------EWVKQFPA-----DGK----------KFSMM--- 313 (393)
Q Consensus 262 ~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~----------~~~~~~~~-----~~~----------~~~~~--- 313 (393)
.+.++||||.|||+..+++++.||-........... ......+. +.. .+..+
T Consensus 255 QttaiDiws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~ 334 (418)
T KOG1167|consen 255 QTTAIDIWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIE 334 (418)
T ss_pred cCCccceeeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChh
Confidence 789999999999999999999999654433221100 00000000 000 00000
Q ss_pred -cCc--c--c-ccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 035862 314 -IDP--R--L-RNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLK 356 (393)
Q Consensus 314 -~~~--~--~-~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~ 356 (393)
+.+ . . ........+..+.+|+++||+.||.+|.|++++|+|..
T Consensus 335 ~~~~~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkHpF 383 (418)
T KOG1167|consen 335 SIYKSRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKHPF 383 (418)
T ss_pred hcccccccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcCcC
Confidence 000 0 0 11111234457899999999999999999999999864
No 403
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.97 E-value=6.3e-29 Score=218.33 Aligned_cols=200 Identities=34% Similarity=0.464 Sum_probs=168.4
Q ss_pred CcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcc-cHHHHHHHHHHhhcCCCCccceeeeeeecCCcccce
Q 035862 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQ-GHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQ 152 (393)
Q Consensus 74 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 152 (393)
|.+.+.||.|++|.||++.....+ ..+++|........ ....+.+|++.++.++|+|++++++++...+ .
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~-----~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~----~ 71 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTG-----ELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPE----P 71 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCC-----cEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCC----c
Confidence 566788999999999999875433 35999999876544 5677888999999999999999999987765 4
Q ss_pred EEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCCcc
Q 035862 153 RLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLARE 232 (393)
Q Consensus 153 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~ 232 (393)
.++++|++.+++|.+++...... +++..++.++.+++.++.+||+. +++|+||+|.||+++.++.++|+|||.+..
T Consensus 72 ~~~v~e~~~~~~L~~~~~~~~~~-~~~~~~~~~~~~l~~~l~~lh~~---~i~h~di~~~ni~v~~~~~~~l~d~g~~~~ 147 (225)
T smart00221 72 LYLVMEYCEGGDLFDYLRKKGGK-LSEEEARFYLRQILEALEYLHSL---GIVHRDLKPENILLGMDGLVKLADFGLARF 147 (225)
T ss_pred eEEEEeccCCCCHHHHHHhcccC-CCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeeCceeeE
Confidence 59999999999999998543321 78899999999999999999998 999999999999999999999999999887
Q ss_pred CCCCCCccccccccccCCccCcccc-ccCCCCchhhHHHHHHHHHHHHhCCCccCC
Q 035862 233 GPTGDHTHVSTAVVGTYGYAAPEYI-ETGHLKSQSDIWSFGVVLYEILTGRRVLER 287 (393)
Q Consensus 233 ~~~~~~~~~~~~~~gt~~y~aPE~~-~~~~~~~~~DiwslGvil~elltg~~pf~~ 287 (393)
....... ......++..|++||.+ ....++.++|+|+||+++++|++|+.||..
T Consensus 148 ~~~~~~~-~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 148 IHRDLAA-LLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred ecCcccc-cccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 5443200 12345678899999998 667788899999999999999999999965
No 404
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.96 E-value=9.8e-30 Score=262.58 Aligned_cols=205 Identities=17% Similarity=0.203 Sum_probs=142.9
Q ss_pred cCCC-CccceeeeeeecCC---cccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 035862 130 VVSH-PNLVKLLGYCSTED---ERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVI 205 (393)
Q Consensus 130 ~l~h-~niv~~~~~~~~~~---~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~iv 205 (393)
.++| +||+.++++|.... .....+++++||+ +++|.++|... ...+++..++.++.||+.||.|||++ ||+
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~---gIv 102 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNP-DRSVDAFECFHVFRQIVEIVNAAHSQ---GIV 102 (793)
T ss_pred hhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcc-cccccHHHHHHHHHHHHHHHHHHHhC---Cee
Confidence 3455 57888888763222 1112346778887 66999999543 34589999999999999999999998 999
Q ss_pred eccCCCCCeEeCCCC-------------------ceEEeeccCCccCCCCCC--------------ccccccccccCCcc
Q 035862 206 YRDFKTSNVLLDGNF-------------------KPKLSDFGLAREGPTGDH--------------THVSTAVVGTYGYA 252 (393)
Q Consensus 206 H~Dikp~NIll~~~~-------------------~~kl~Dfg~a~~~~~~~~--------------~~~~~~~~gt~~y~ 252 (393)
||||||+||||+..| .+|++|||+++....... .......+||+.|+
T Consensus 103 HrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~ 182 (793)
T PLN00181 103 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYT 182 (793)
T ss_pred eccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceE
Confidence 999999999996544 455666666543211000 00011246889999
Q ss_pred CccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcCCcccccccCcccccccCHHHHHHHHH
Q 035862 253 APEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKFSMMIDPRLRNQYSINAARRVAK 332 (393)
Q Consensus 253 aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 332 (393)
|||++.+..|+.++|||||||+||||++|.+|+....... ....... ..+.. ........+
T Consensus 183 APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~~~----~~~~~~~----------~~~~~-----~~~~~~~~~ 243 (793)
T PLN00181 183 SPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSRTM----SSLRHRV----------LPPQI-----LLNWPKEAS 243 (793)
T ss_pred ChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHHHH----HHHHHhh----------cChhh-----hhcCHHHHH
Confidence 9999999999999999999999999999988765321111 1110000 00000 011234568
Q ss_pred HHHHhcccCCCCCCCHHHHHHHHHHH
Q 035862 333 LADNCLKKNPEERPTMNQVVESLKLA 358 (393)
Q Consensus 333 li~~~l~~dp~~Rps~~~~l~~l~~~ 358 (393)
++..||+++|.+||++.++++|.+..
T Consensus 244 ~~~~~L~~~P~~Rps~~eil~h~~~~ 269 (793)
T PLN00181 244 FCLWLLHPEPSCRPSMSELLQSEFIN 269 (793)
T ss_pred HHHHhCCCChhhCcChHHHhhchhhh
Confidence 89999999999999999999998754
No 405
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.96 E-value=4.1e-28 Score=205.35 Aligned_cols=170 Identities=25% Similarity=0.268 Sum_probs=129.9
Q ss_pred CChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCCccCCCCCCcccc
Q 035862 163 RSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVS 242 (393)
Q Consensus 163 ~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~ 242 (393)
|+|.+++... ...+++..++.++.|++.||.|||++ + ||+|||++.++.+|+ ||++......
T Consensus 1 GsL~~~l~~~-~~~l~~~~~~~i~~qi~~~L~~lH~~---~------kp~Nil~~~~~~~~~--fG~~~~~~~~------ 62 (176)
T smart00750 1 VSLADILEVR-GRPLNEEEIWAVCLQCLRALRELHRQ---A------KSGNILLTWDGLLKL--DGSVAFKTPE------ 62 (176)
T ss_pred CcHHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhc---C------CcccEeEcCccceee--ccceEeeccc------
Confidence 6899988643 34699999999999999999999997 6 999999999999999 9998764332
Q ss_pred ccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcCCcccccccCccccccc
Q 035862 243 TAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKFSMMIDPRLRNQY 322 (393)
Q Consensus 243 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (393)
...|++.|+|||++.+..++.++|||||||++|||++|+.||....... ..+........... +. ....
T Consensus 63 -~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~-~~~~~~~~~~~~~~--------~~-~~~~ 131 (176)
T smart00750 63 -QSRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELS-AILEILLNGMPADD--------PR-DRSN 131 (176)
T ss_pred -cCCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhc-HHHHHHHHHhccCC--------cc-cccc
Confidence 2268899999999999999999999999999999999999996543211 11111111111100 00 0011
Q ss_pred CHHHHH--HHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhh
Q 035862 323 SINAAR--RVAKLADNCLKKNPEERPTMNQVVESLKLAVQE 361 (393)
Q Consensus 323 ~~~~~~--~l~~li~~~l~~dp~~Rps~~~~l~~l~~~~~~ 361 (393)
....+. ++.+++.+||..+|.+||++.+++++++.....
T Consensus 132 ~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~~~ 172 (176)
T smart00750 132 LESVSAARSFADFMRVCASRLPQRREAANHYLAHCRALFAE 172 (176)
T ss_pred HHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHHHHH
Confidence 123333 699999999999999999999999999988654
No 406
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.95 E-value=4.9e-26 Score=210.89 Aligned_cols=264 Identities=25% Similarity=0.227 Sum_probs=200.4
Q ss_pred CCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcccHHHHHHHHHHhhcCCC----Cccceeeeeee-cCC
Q 035862 73 GFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSH----PNLVKLLGYCS-TED 147 (393)
Q Consensus 73 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h----~niv~~~~~~~-~~~ 147 (393)
+|.+.++||+|+||.||.+.+.... ...+|+|............+..|..++..+.. +++..+++... ...
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~----~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~ 94 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEK----NKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTED 94 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCC----CeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCc
Confidence 7999999999999999999865432 44688888776533332356678888888863 58888888774 333
Q ss_pred cccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCC-----Cce
Q 035862 148 ERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGN-----FKP 222 (393)
Q Consensus 148 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~-----~~~ 222 (393)
+.++||+.+ |.+|.++........++..++..++.|++.+|.+||+. |++||||||+|+++... -.+
T Consensus 95 ----~~~iVM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~---G~iHRDiKp~N~~~g~~~~~~~~~~ 166 (322)
T KOG1164|consen 95 ----FNFIVMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSK---GFIHRDIKPENFVVGQSSRSEVRTL 166 (322)
T ss_pred ----eeEEEEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhc---CcccCCcCHHHeeecCCCCcccceE
Confidence 559999999 88999987656667899999999999999999999998 99999999999999765 359
Q ss_pred EEeeccCCc--cCCCCCCc---cc---cccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhh-
Q 035862 223 KLSDFGLAR--EGPTGDHT---HV---STAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTME- 293 (393)
Q Consensus 223 kl~Dfg~a~--~~~~~~~~---~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~- 293 (393)
.|.|||+++ ........ .. .....||..|+++.+..+...+.+.|+||++.++.+++.|..||........
T Consensus 167 ~llDfGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~ 246 (322)
T KOG1164|consen 167 YLLDFGLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLK 246 (322)
T ss_pred EEEecCCCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccchH
Confidence 999999998 32222211 11 1245699999999999999999999999999999999999999966543322
Q ss_pred hHHHHHHhhcCcCCcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhh
Q 035862 294 QKLLEWVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQES 362 (393)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~~~~~ 362 (393)
..+........... .....+..+..+...+-..+..++|....+...+.......
T Consensus 247 ~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~~~~ 301 (322)
T KOG1164|consen 247 SKFEKDPRKLLTDR--------------FGDLKPEEFAKILEYIDSLDYEDKPDYEKLAELLKDVFDSE 301 (322)
T ss_pred HHHHHHhhhhcccc--------------ccCCChHHHHHHHHHhhccCCcCCCCHHHHHHHHHHHHHhc
Confidence 12211111111100 11123466777777777799999999999999998888766
No 407
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.93 E-value=3.4e-25 Score=193.03 Aligned_cols=264 Identities=19% Similarity=0.207 Sum_probs=201.2
Q ss_pred CCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcccHHHHHHHHHHhhcCC-CCccceeeeeeecCCcccc
Q 035862 73 GFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVS-HPNLVKLLGYCSTEDERGI 151 (393)
Q Consensus 73 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~ 151 (393)
.|.+.++||+|+||.++.|...-.. ..||||.-...+. ..++..|.+..+.+. .++|...+-+..+.-
T Consensus 29 hyrVGkKIGeGsFG~lf~G~Nl~nn-----e~VAIKfEPrkS~--APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~---- 97 (449)
T KOG1165|consen 29 HYRVGKKIGEGSFGVLFLGKNLYNN-----EPVAIKFEPRKSE--APQLRDEYRTYKLLGGTEGIPQVYYFGQEGK---- 97 (449)
T ss_pred cceeccccccCcceeeecccccccC-----ceEEEEeccccCC--cchHHHHHHHHHHHcCCCCCCceeeeccccc----
Confidence 5999999999999999999865443 4699998765432 356777888888886 788888876654433
Q ss_pred eEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCC-----ceEEee
Q 035862 152 QRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNF-----KPKLSD 226 (393)
Q Consensus 152 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~-----~~kl~D 226 (393)
+-.||+|.+ |.+|+|++ .-+...++..++..++.|++.-++|+|.+ .+|.|||||+|+||...+ .|.++|
T Consensus 98 ~NiLVidLL-GPSLEDLF-D~CgR~FSvKTV~miA~Qmi~rie~vH~k---~LIYRDIKPdNFLIGrp~~k~~n~IhiiD 172 (449)
T KOG1165|consen 98 YNILVIDLL-GPSLEDLF-DLCGRRFSVKTVAMIAKQMITRIEYVHEK---DLIYRDIKPDNFLIGRPGTKDANVIHIID 172 (449)
T ss_pred hhhhhhhhh-CcCHHHHH-HHhcCcccHHhHHHHHHHHHHHHHHHHhc---ceeecccCccceeecCCCCCCCceEEEEe
Confidence 458999999 88999954 56778899999999999999999999999 999999999999996544 489999
Q ss_pred ccCCccCCCCCCcc-----ccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHh
Q 035862 227 FGLAREGPTGDHTH-----VSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVK 301 (393)
Q Consensus 227 fg~a~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~ 301 (393)
||+|+...+..... ...+..||..||+.....+.+.+.+.|+-|||-++++.|-|..||.+-.........+...
T Consensus 173 FGmAK~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK~kYeKIG 252 (449)
T KOG1165|consen 173 FGMAKEYRDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADTNKEKYEKIG 252 (449)
T ss_pred ccchhhhcCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCcchHHHHHHhc
Confidence 99998766554332 2346789999999999999999999999999999999999999997654322221111110
Q ss_pred hcCcCCcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHhhh
Q 035862 302 QFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAVQES 362 (393)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~~~~~ 362 (393)
. ... ..-....-.+++.++...+.-.=+.+-.+-|..+-+...+..++...
T Consensus 253 e---~Kr-------~T~i~~Lc~g~P~efa~Yl~yvR~L~F~E~PDYdylr~Lf~dvldr~ 303 (449)
T KOG1165|consen 253 E---TKR-------STPIEVLCEGFPEEFATYLRYVRRLDFFETPDYDYLRKLFDDVLDRL 303 (449)
T ss_pred c---ccc-------cCCHHHHHhcCHHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHhc
Confidence 0 000 00001111245678888888888888899999988888887777543
No 408
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.93 E-value=8.5e-27 Score=229.34 Aligned_cols=264 Identities=22% Similarity=0.226 Sum_probs=192.0
Q ss_pred cccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCC-c-ccHHHHHHHHHHhhcCCCCccceeeeeeecCCcccce
Q 035862 75 NRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG-L-QGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQ 152 (393)
Q Consensus 75 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 152 (393)
.....+|.|++|.|+.+.............+.++ ..... . .....+..|+.+-..++|||++..+..+......
T Consensus 321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~-~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~--- 396 (601)
T KOG0590|consen 321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVR-VKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGI--- 396 (601)
T ss_pred CccceeeecccCceEEEEecCCCccchhhhhhcc-cCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccc---
Confidence 4566799999998888776544444333334433 21111 0 1111245677788889999998887777665543
Q ss_pred EEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCCcc
Q 035862 153 RLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLARE 232 (393)
Q Consensus 153 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~ 232 (393)
.-+||||++ +|..++.. ...+....+..++.||+.|+.|+|.. ||.|||+|++|++++.+|.+||+|||.+..
T Consensus 397 -~~~mE~~~~-Dlf~~~~~--~~~~~~~e~~c~fKqL~~Gv~y~h~~---GiahrdlK~enll~~~~g~lki~Dfg~~~v 469 (601)
T KOG0590|consen 397 -LQSMEYCPY-DLFSLVMS--NGKLTPLEADCFFKQLLRGVKYLHSM---GLAHRDLKLENLLVTENGILKIIDFGAASV 469 (601)
T ss_pred -hhhhhcccH-HHHHHHhc--ccccchhhhhHHHHHHHHHHHHHHhc---CceeccCccccEEEecCCceEEeecCccee
Confidence 334999999 99998843 34577888899999999999999998 999999999999999999999999999976
Q ss_pred CCCCCCc--cccccccccCCccCccccccCCCCc-hhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcCCcc
Q 035862 233 GPTGDHT--HVSTAVVGTYGYAAPEYIETGHLKS-QSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKK 309 (393)
Q Consensus 233 ~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~-~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 309 (393)
+...... ......+|+..|+|||++.+..|++ ..||||.|++++.|.+|+.||........+.. . ......
T Consensus 470 f~~~~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~-~--~~~~~~--- 543 (601)
T KOG0590|consen 470 FRYPWEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFK-T--NNYSDQ--- 543 (601)
T ss_pred eccCcchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchh-h--hccccc---
Confidence 5544443 4556789999999999999999986 58999999999999999999976543322110 0 000000
Q ss_pred cccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q 035862 310 FSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLA 358 (393)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~ 358 (393)
.-...-.......++.....+|.+||+.||.+|.|+++|++.-|..
T Consensus 544 ---~~~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d~W~~ 589 (601)
T KOG0590|consen 544 ---RNIFEGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILNDEWIR 589 (601)
T ss_pred ---cccccChHHHHHhchhhHHHHHHHHccCChhheecHHHHhhChHhh
Confidence 0000011112235677889999999999999999999999987754
No 409
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.93 E-value=2.6e-25 Score=185.65 Aligned_cols=261 Identities=22% Similarity=0.261 Sum_probs=192.3
Q ss_pred hcCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcccHHHHHHHHHHhhcCCC-CccceeeeeeecCCcc
Q 035862 71 TNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSH-PNLVKLLGYCSTEDER 149 (393)
Q Consensus 71 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~~~~~~~~~~~~ 149 (393)
.+.|.++++||+|+||.+|.|.....+. .||+|+-.... ...++..|.++.+.+++ ..|..+..+..+..
T Consensus 14 ~gky~lvrkiGsGSFGdIy~~~~i~~ge-----~VAiK~Es~~a--~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~-- 84 (341)
T KOG1163|consen 14 GGKYKLVRKIGSGSFGDIYLGISITSGE-----EVAIKLESSKA--KHPQLLYESKVYRILQGGVGIPHIRHYGTEKD-- 84 (341)
T ss_pred ccceEEEEeecCCchhheeeeeeccCCc-----eEEEEeecccC--CCcchhHHHHHHHHhccCCCCchhhhhccccc--
Confidence 4679999999999999999999765554 49999987653 33557779999998884 45555555565555
Q ss_pred cceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCC---CceEEee
Q 035862 150 GIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGN---FKPKLSD 226 (393)
Q Consensus 150 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~---~~~kl~D 226 (393)
+-.+||+.+ |.+|++++ +-....++..+++.++.|++.-++|+|.. +.+||||||+|+|..-+ ..+.|+|
T Consensus 85 --ynvlVMdLL-GPsLEdLf-nfC~R~ftmkTvLMLaDQml~RiEyvH~r---~fiHRDIKPdNFLMGlgrh~~kl~LID 157 (341)
T KOG1163|consen 85 --YNVLVMDLL-GPSLEDLF-NFCSRRFTMKTVLMLADQMLSRIEYVHLR---NFIHRDIKPDNFLMGLGRHCNKLYLID 157 (341)
T ss_pred --cceeeeecc-CccHHHHH-HHHhhhhhHHhHHHHHHHHHHHHHHHHhh---ccccccCCccceeeccccccceEEEEe
Confidence 348999999 88999965 44566789999999999999999999998 99999999999999644 4699999
Q ss_pred ccCCccCCCCCCcc-----ccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHh
Q 035862 227 FGLAREGPTGDHTH-----VSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVK 301 (393)
Q Consensus 227 fg~a~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~ 301 (393)
||+|+..-+..... ......||..|.+-....+...+.+.|+-|+|.+|..+.-|..||.+-.....+...+...
T Consensus 158 FGLaKky~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QKyEkI~ 237 (341)
T KOG1163|consen 158 FGLAKKYRDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQKYEKIS 237 (341)
T ss_pred ccchhhhccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhhHHHHHHHHH
Confidence 99998654432221 2345689999999988888889999999999999999999999998766554433222221
Q ss_pred hcCcCCcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 035862 302 QFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKL 357 (393)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~ 357 (393)
..... ..+ ...-...|.++.-.+.-|=..--++-|...-+-+.+.-
T Consensus 238 EkK~s-----~~i-----e~LC~G~P~EF~myl~Y~R~L~F~E~Pdy~ylrqlFri 283 (341)
T KOG1163|consen 238 EKKMS-----TPI-----EVLCKGFPAEFAMYLNYCRGLGFEEKPDYMYLRQLFRI 283 (341)
T ss_pred HhhcC-----CCH-----HHHhCCCcHHHHHHHHHHhhcCCCCCCcHHHHHHHHHH
Confidence 11110 000 00111235667777777777777777776655554443
No 410
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.93 E-value=3.9e-25 Score=204.52 Aligned_cols=168 Identities=18% Similarity=0.121 Sum_probs=127.2
Q ss_pred HHhcCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCC-----CcccHHHHHHHHHHhhcCCCCccce-eeee
Q 035862 69 EATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNH-----GLQGHKQWLAEVQFLGVVSHPNLVK-LLGY 142 (393)
Q Consensus 69 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~h~niv~-~~~~ 142 (393)
...++|.+.+.||+|+||+||+|.+... .+..+|+|++... .......+.+|+++|+.++|+|++. ++++
T Consensus 15 ~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~----~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~ 90 (365)
T PRK09188 15 ALSARFVETAVLKRDVFSTVERGYFAGD----PGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT 90 (365)
T ss_pred cccCCceEccEEeecCcEEEEEEEEcCC----CCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc
Confidence 3456899999999999999999986532 2335799986533 1123456889999999999999985 4432
Q ss_pred eecCCcccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccC-CCCCeEeCCCCc
Q 035862 143 CSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDF-KTSNVLLDGNFK 221 (393)
Q Consensus 143 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Di-kp~NIll~~~~~ 221 (393)
+ ..++||||++|++|.. + ... . ...++.|++.||.|||+. ||+|||| ||+|||++.++.
T Consensus 91 ----~----~~~LVmE~~~G~~L~~-~--~~~---~---~~~~~~~i~~aL~~lH~~---gIiHrDL~KP~NILv~~~~~ 150 (365)
T PRK09188 91 ----G----KDGLVRGWTEGVPLHL-A--RPH---G---DPAWFRSAHRALRDLHRA---GITHNDLAKPQNWLMGPDGE 150 (365)
T ss_pred ----C----CcEEEEEccCCCCHHH-h--Ccc---c---hHHHHHHHHHHHHHHHHC---CCeeCCCCCcceEEEcCCCC
Confidence 2 2499999999999963 2 111 1 146789999999999998 9999999 999999999999
Q ss_pred eEEeeccCCccCCCCCCccc------cccccccCCccCccccccC
Q 035862 222 PKLSDFGLAREGPTGDHTHV------STAVVGTYGYAAPEYIETG 260 (393)
Q Consensus 222 ~kl~Dfg~a~~~~~~~~~~~------~~~~~gt~~y~aPE~~~~~ 260 (393)
+||+|||+++.......... .....++..|+|||.+...
T Consensus 151 ikLiDFGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~ 195 (365)
T PRK09188 151 AAVIDFQLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTPR 195 (365)
T ss_pred EEEEECccceecccCcchhhhhhhhhhhhhhccCccCCcccCChh
Confidence 99999999986544321111 1356788889999988643
No 411
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.92 E-value=1.9e-23 Score=193.81 Aligned_cols=260 Identities=33% Similarity=0.506 Sum_probs=196.6
Q ss_pred CcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcc---cHHHHHHHHHHhhcCCCC-ccceeeeeeecCCcc
Q 035862 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQ---GHKQWLAEVQFLGVVSHP-NLVKLLGYCSTEDER 149 (393)
Q Consensus 74 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~-niv~~~~~~~~~~~~ 149 (393)
|.....||.|+||.||++.+. ..+++|.+...... ....+.+|+.++..+.|+ +++++++++....
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~--------~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~-- 71 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR--------KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEG-- 71 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec--------cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCC--
Confidence 677889999999999999865 35888888765433 356788999999999988 7999999995554
Q ss_pred cceEEEEEeecCCCChHHHHhhcCC-CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCC-ceEEeec
Q 035862 150 GIQRLLVYEYMPNRSLEDRLFSRAQ-PTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNF-KPKLSDF 227 (393)
Q Consensus 150 ~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~-~~kl~Df 227 (393)
..+++++++.++++.+++..... ..++......++.|++.++.|+|+. +++|||+||+||+++..+ .++++||
T Consensus 72 --~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~---~~~hrd~kp~nil~~~~~~~~~l~df 146 (384)
T COG0515 72 --SLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSK---GIIHRDIKPENILLDRDGRVVKLIDF 146 (384)
T ss_pred --EEEEEEecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeecCCCCeEEEecc
Confidence 35899999999999976643321 2688999999999999999999998 999999999999999998 7999999
Q ss_pred cCCccCCCCCCcc----ccccccccCCccCcccccc---CCCCchhhHHHHHHHHHHHHhCCCccCCCCch-hhhHHHHH
Q 035862 228 GLAREGPTGDHTH----VSTAVVGTYGYAAPEYIET---GHLKSQSDIWSFGVVLYEILTGRRVLERNRPT-MEQKLLEW 299 (393)
Q Consensus 228 g~a~~~~~~~~~~----~~~~~~gt~~y~aPE~~~~---~~~~~~~DiwslGvil~elltg~~pf~~~~~~-~~~~~~~~ 299 (393)
|.+.......... ......|+..|+|||.+.+ ..++...|+||+|++++++++|..||...... ........
T Consensus 147 g~~~~~~~~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 226 (384)
T COG0515 147 GLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKI 226 (384)
T ss_pred CcceecCCCCccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHH
Confidence 9997544433221 2356789999999999987 57889999999999999999999997665431 01111111
Q ss_pred HhhcCcCCcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 035862 300 VKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVES 354 (393)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~ 354 (393)
....... ......... ........+.+++..|+..+|..|.+..+...+
T Consensus 227 ~~~~~~~--~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 227 ILELPTP--SLASPLSPS----NPELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred HHhcCCc--ccccccCcc----ccchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 1111111 000000000 002234678899999999999999999988887
No 412
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.92 E-value=3.2e-25 Score=188.28 Aligned_cols=250 Identities=22% Similarity=0.399 Sum_probs=193.9
Q ss_pred CCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCC--CcccHHHHHHHHHHhhcCCCCccceeeeeeecCCccc
Q 035862 73 GFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNH--GLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERG 150 (393)
Q Consensus 73 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 150 (393)
+.....+|.+...|..|+|++...+ ++.|++.-. .....+.|..|.-.|+.+.||||+.+++.|..+.
T Consensus 191 ~lnl~tkl~e~hsgelwrgrwqgnd-------ivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnspp--- 260 (448)
T KOG0195|consen 191 SLNLITKLAESHSGELWRGRWQGND-------IVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPP--- 260 (448)
T ss_pred hhhhhhhhccCCCcccccccccCcc-------hhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCC---
Confidence 3455667999999999999987555 555655432 2233356788999999999999999999998876
Q ss_pred ceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEe--ecc
Q 035862 151 IQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLS--DFG 228 (393)
Q Consensus 151 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~--Dfg 228 (393)
.+.+|..|++.|+|...++.......+-.++..++.++++|++|||+. +.-|.---|....++|+++.+.+|+ |-.
T Consensus 261 -nlv~isq~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhsl-ep~ipr~~lns~hvmidedltarismad~k 338 (448)
T KOG0195|consen 261 -NLVIISQYMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSL-EPMIPRFYLNSKHVMIDEDLTARISMADTK 338 (448)
T ss_pred -CceEeeeeccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhc-chhhhhhhcccceEEecchhhhheecccce
Confidence 569999999999999999877777778889999999999999999986 3234444688999999999987765 322
Q ss_pred CCccCCCCCCccccccccccCCccCccccccCCCC---chhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCc
Q 035862 229 LAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLK---SQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPA 305 (393)
Q Consensus 229 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~---~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~ 305 (393)
++.. .......|.|++||.++..+.+ ..+|+|||++++|||-|...||.+-++-.....
T Consensus 339 fsfq---------e~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmk--------- 400 (448)
T KOG0195|consen 339 FSFQ---------EVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMK--------- 400 (448)
T ss_pred eeee---------ccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhh---------
Confidence 2211 1223457899999999776544 478999999999999999999987655322211
Q ss_pred CCcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHH
Q 035862 306 DGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAV 359 (393)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~~ 359 (393)
+--.+++...++..+..+..|+.-|++.||.+||.+..++-.|++..
T Consensus 401 -------ialeglrv~ippgis~hm~klm~icmnedpgkrpkfdmivpilekm~ 447 (448)
T KOG0195|consen 401 -------IALEGLRVHIPPGISRHMNKLMNICMNEDPGKRPKFDMIVPILEKMI 447 (448)
T ss_pred -------hhhccccccCCCCccHHHHHHHHHHhcCCCCcCCCcceehhhHHHhc
Confidence 11234556667778899999999999999999999999998888753
No 413
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.90 E-value=5.5e-24 Score=183.34 Aligned_cols=176 Identities=12% Similarity=0.085 Sum_probs=132.3
Q ss_pred HhcCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcccHHH---------HHHHHHHhhcCCCCccceee
Q 035862 70 ATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQ---------WLAEVQFLGVVSHPNLVKLL 140 (393)
Q Consensus 70 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~---------~~~E~~~l~~l~h~niv~~~ 140 (393)
..++|+.++.||.|+||.||++... .. .+++|.+.......... +.+|+..+.++.|++|..+.
T Consensus 29 l~~~y~~~~~l~~~~f~~v~l~~~~--~~-----~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~ 101 (232)
T PRK10359 29 LSYNIKTIKVFRNIDDTKVSLIDTD--YG-----KYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLN 101 (232)
T ss_pred hhCceEEEEEecCCCceEEEEEecC--CC-----cEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcce
Confidence 4578999999999999999996532 11 39999997654332222 56899999999999999998
Q ss_pred eeeecCCcc----cceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEe
Q 035862 141 GYCSTEDER----GIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLL 216 (393)
Q Consensus 141 ~~~~~~~~~----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll 216 (393)
+++...... ....+++|||++|.+|.++. .+++ ....+++.++..+|+. |++|||++|+||++
T Consensus 102 d~~~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~------~~~~----~~~~~i~~~l~~lH~~---gi~H~Dikp~Nili 168 (232)
T PRK10359 102 DFYLLAERKTLRYAHTYIMLIEYIEGVELNDMP------EISE----DVKAKIKASIESLHQH---GMVSGDPHKGNFIV 168 (232)
T ss_pred EeeeecccccccccCCeEEEEEEECCccHHHhh------hccH----HHHHHHHHHHHHHHHc---CCccCCCChHHEEE
Confidence 886644311 12458999999999998864 1222 3456899999999999 99999999999999
Q ss_pred CCCCceEEeeccCCccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHh
Q 035862 217 DGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILT 280 (393)
Q Consensus 217 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ellt 280 (393)
+.+| ++|+|||........... ..++....|+.++|+||||+++..+..
T Consensus 169 ~~~g-i~liDfg~~~~~~e~~a~--------------d~~vler~y~~~~di~~lg~~~~~~~~ 217 (232)
T PRK10359 169 SKNG-LRIIDLSGKRCTAQRKAK--------------DRIDLERHYGIKNEIKDLGYYLLIYKK 217 (232)
T ss_pred eCCC-EEEEECCCcccccchhhH--------------HHHHHHhHhcccccccceeEeehHHHH
Confidence 9999 999999988654221110 003344557789999999999876543
No 414
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.88 E-value=1.6e-23 Score=207.19 Aligned_cols=247 Identities=21% Similarity=0.268 Sum_probs=173.8
Q ss_pred CCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCc-c---cHHHHHHHHHHhhcCCCCccceeeeeeecCCc
Q 035862 73 GFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL-Q---GHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDE 148 (393)
Q Consensus 73 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 148 (393)
.|...+.||.+.|-.|.+|+++.. .|++|++-+..+ . ...+.+.|++ ...+++||.+++.-+......
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG-------~vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~t~kA 95 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREG-------LVVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLVTDKA 95 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCc-------eEEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHHhhHH
Confidence 466777899999999999985421 288888765432 2 2334445555 556789999998877555543
Q ss_pred ccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeecc
Q 035862 149 RGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFG 228 (393)
Q Consensus 149 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg 228 (393)
.|||-+|+.+ +|.|.+ ...+-+..-+.+.|+.||+.||..+|.. ||+|||||.+||||+.-.-+.|+||.
T Consensus 96 ----AylvRqyvkh-nLyDRl--STRPFL~~iEKkWiaFQLL~al~qcH~~---gVcHGDIKsENILiTSWNW~~LtDFA 165 (1431)
T KOG1240|consen 96 ----AYLVRQYVKH-NLYDRL--STRPFLVLIEKKWIAFQLLKALSQCHKL---GVCHGDIKSENILITSWNWLYLTDFA 165 (1431)
T ss_pred ----HHHHHHHHhh-hhhhhh--ccchHHHHHHHHHHHHHHHHHHHHHHHc---CccccccccceEEEeeechhhhhccc
Confidence 3788889855 999988 4445567778889999999999999998 99999999999999999999999997
Q ss_pred CCccCCCCCCc-----cccccccccCCccCccccccC----------C-CCchhhHHHHHHHHHHHHh-CCCccCCCCch
Q 035862 229 LAREGPTGDHT-----HVSTAVVGTYGYAAPEYIETG----------H-LKSQSDIWSFGVVLYEILT-GRRVLERNRPT 291 (393)
Q Consensus 229 ~a~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~----------~-~~~~~DiwslGvil~ellt-g~~pf~~~~~~ 291 (393)
.-+..-..+.. -...+...-..|+|||.+... . .+++.||||+||+++||++ |++||.-.
T Consensus 166 sFKPtYLPeDNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LS--- 242 (1431)
T KOG1240|consen 166 SFKPTYLPEDNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLS--- 242 (1431)
T ss_pred ccCCccCCCCCcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHH---
Confidence 65432222111 122333444579999988431 1 5678999999999999988 68888521
Q ss_pred hhhHHHHHHhhcCcCCcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 035862 292 MEQKLLEWVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVES 354 (393)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~ 354 (393)
+.+ .+-..-..++ +..-..+ .+..+++++..|++.||.+|.++++.|+.
T Consensus 243 --QL~-aYr~~~~~~~----e~~Le~I-------ed~~~Rnlil~Mi~rdPs~RlSAedyL~~ 291 (1431)
T KOG1240|consen 243 --QLL-AYRSGNADDP----EQLLEKI-------EDVSLRNLILSMIQRDPSKRLSAEDYLQK 291 (1431)
T ss_pred --HHH-hHhccCccCH----HHHHHhC-------cCccHHHHHHHHHccCchhccCHHHHHHh
Confidence 111 1110000000 0000000 12357889999999999999999999986
No 415
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.88 E-value=1.4e-22 Score=172.61 Aligned_cols=139 Identities=17% Similarity=0.110 Sum_probs=105.0
Q ss_pred cceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcc--c------------------------HHHHHHHHHHhhc
Q 035862 77 MLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQ--G------------------------HKQWLAEVQFLGV 130 (393)
Q Consensus 77 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~--~------------------------~~~~~~E~~~l~~ 130 (393)
...||+|+||.||+|.+. ++..||+|+++..... . ......|++++..
T Consensus 2 ~~~ig~G~~~~Vy~a~~~------~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~ 75 (190)
T cd05147 2 NGCISTGKEANVYHATTA------NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKR 75 (190)
T ss_pred CCccccccceEEEEEECC------CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHH
Confidence 457999999999999853 3346999998754211 0 0122359999999
Q ss_pred CCCCccceeeeeeecCCcccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHh-hcCCCCCeEeccC
Q 035862 131 VSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYL-HEGLEIQVIYRDF 209 (393)
Q Consensus 131 l~h~niv~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~L-H~~~~~~ivH~Di 209 (393)
+.++++.....+.... .++||||++|+++...+. ....++...+..++.|++.+|.++ |+. ||+||||
T Consensus 76 l~~~~v~~p~~~~~~~------~~iVmE~i~g~~l~~~~~--~~~~~~~~~~~~i~~qi~~~L~~l~H~~---giiHrDl 144 (190)
T cd05147 76 LVTAGIPCPEPILLKS------HVLVMEFIGDDGWAAPRL--KDAPLSESKARELYLQVIQIMRILYQDC---RLVHADL 144 (190)
T ss_pred HHHCCCCCCcEEEecC------CEEEEEEeCCCCCcchhh--hcCCCCHHHHHHHHHHHHHHHHHHHHhC---CcccCCC
Confidence 9887764433222211 189999998877765432 234688899999999999999999 687 9999999
Q ss_pred CCCCeEeCCCCceEEeeccCCccC
Q 035862 210 KTSNVLLDGNFKPKLSDFGLAREG 233 (393)
Q Consensus 210 kp~NIll~~~~~~kl~Dfg~a~~~ 233 (393)
||+|||++ ++.++|+|||+|...
T Consensus 145 kP~NIli~-~~~v~LiDFG~a~~~ 167 (190)
T cd05147 145 SEYNLLYH-DGKLYIIDVSQSVEH 167 (190)
T ss_pred CHHHEEEE-CCcEEEEEccccccC
Confidence 99999998 578999999999753
No 416
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.87 E-value=1.7e-21 Score=166.54 Aligned_cols=140 Identities=18% Similarity=0.105 Sum_probs=107.2
Q ss_pred cceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCccc--------------------------HHHHHHHHHHhhc
Q 035862 77 MLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQG--------------------------HKQWLAEVQFLGV 130 (393)
Q Consensus 77 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~--------------------------~~~~~~E~~~l~~ 130 (393)
...||+|++|.||+|.+. ++..||+|++....... ...+..|...+..
T Consensus 2 ~~~ig~G~~~~Vy~a~~~------~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~ 75 (190)
T cd05145 2 NGCISTGKEANVYHARTG------DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKR 75 (190)
T ss_pred CceeecCCCcEEEEEEcC------CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHH
Confidence 467999999999999854 34469999987652110 1123478899999
Q ss_pred CCCCccceeeeeeecCCcccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhc-CCCCCeEeccC
Q 035862 131 VSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHE-GLEIQVIYRDF 209 (393)
Q Consensus 131 l~h~niv~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~-~~~~~ivH~Di 209 (393)
+.|+++.....+.... .++||||++|+++..... ....++...+..++.|++.++.++|+ . ||+||||
T Consensus 76 l~~~~i~~p~~~~~~~------~~lVmE~~~g~~~~~~~l--~~~~~~~~~~~~i~~~l~~~l~~lH~~~---givHrDl 144 (190)
T cd05145 76 LYEAGVPVPEPILLKK------NVLVMEFIGDDGSPAPRL--KDVPLEEEEAEELYEQVVEQMRRLYQEA---GLVHGDL 144 (190)
T ss_pred HHhCCCCCceEEEecC------CEEEEEEecCCCchhhhh--hhccCCHHHHHHHHHHHHHHHHHHHHhC---CEecCCC
Confidence 9998875444433322 289999998876544321 22457788899999999999999999 8 9999999
Q ss_pred CCCCeEeCCCCceEEeeccCCccCC
Q 035862 210 KTSNVLLDGNFKPKLSDFGLAREGP 234 (393)
Q Consensus 210 kp~NIll~~~~~~kl~Dfg~a~~~~ 234 (393)
||+|||++ ++.++|+|||++....
T Consensus 145 kP~NIll~-~~~~~liDFG~a~~~~ 168 (190)
T cd05145 145 SEYNILYH-DGKPYIIDVSQAVELD 168 (190)
T ss_pred ChhhEEEE-CCCEEEEEcccceecC
Confidence 99999999 8999999999997643
No 417
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.87 E-value=1.9e-21 Score=195.54 Aligned_cols=253 Identities=21% Similarity=0.211 Sum_probs=185.7
Q ss_pred HHHHhcCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcccHHHHHHHHHHhhcCC---CCccceeeeee
Q 035862 67 LREATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVS---HPNLVKLLGYC 143 (393)
Q Consensus 67 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~~~~~~ 143 (393)
++.....|.+-+.||+|+||+||+|...+ +..||+|+-.+..... |.--.+++.+|+ -+.|+.+...+
T Consensus 693 ~~~~~~~~~I~~e~G~g~y~~vy~a~~~~------~~~~alK~e~P~~~WE---fYI~~q~~~RLk~~~~~~~~~~~~a~ 763 (974)
T KOG1166|consen 693 FEVGGEKFCISKEIGEGSYGSVYVATHSN------GKLVALKVEKPPNPWE---FYICLQVMERLKPQMLPSIMHISSAH 763 (974)
T ss_pred eeecceeEEEEeeeccccceEEEEeecCC------CcEEEEEeecCCCcee---eeehHHHHHhhchhhhcchHHHHHHH
Confidence 33445679999999999999999998543 5679999988765431 111222333333 34556665555
Q ss_pred ecCCcccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeC------
Q 035862 144 STEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLD------ 217 (393)
Q Consensus 144 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~------ 217 (393)
...+.. ++|+||.+.|+|.+++ +..+.+++..+..++.|++..++.||.. +||||||||+|.||.
T Consensus 764 ~~~~~S----~lv~ey~~~Gtlld~~--N~~~~m~e~lv~~~~~qml~ive~lH~~---~IIHgDiKPDNfll~~~~~~~ 834 (974)
T KOG1166|consen 764 VFQNAS----VLVSEYSPYGTLLDLI--NTNKVMDEYLVMFFSCQMLRIVEHLHAM---GIIHGDIKPDNFLLRREICAD 834 (974)
T ss_pred ccCCcc----eeeeeccccccHHHhh--ccCCCCCchhhhHHHHHHHHHHHHHHhc---ceecccCCcceeEeecccCCC
Confidence 555543 8999999999999999 4677899999999999999999999998 999999999999993
Q ss_pred -CCCceEEeeccCCccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHH
Q 035862 218 -GNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKL 296 (393)
Q Consensus 218 -~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~ 296 (393)
+..-++|+|||.+..+..-.........++|..+-.+|+..|..|++.+|.|.|+.+++.||.|++.-
T Consensus 835 ~~~~~l~lIDfG~siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y~q----------- 903 (974)
T KOG1166|consen 835 SDSKGLYLIDFGRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKYME----------- 903 (974)
T ss_pred CcccceEEEecccceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHHHH-----------
Confidence 23359999999997654444344566788999999999999999999999999999999999996421
Q ss_pred HHHHhhcCcCCcccccccCcccccccCHHHHHHH-HHHHHHhcccCCCCCCCHHHHHHHHHHHHhh
Q 035862 297 LEWVKQFPADGKKFSMMIDPRLRNQYSINAARRV-AKLADNCLKKNPEERPTMNQVVESLKLAVQE 361 (393)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~li~~~l~~dp~~Rps~~~~l~~l~~~~~~ 361 (393)
..++.. ..++..++. ....++ .+|+..+|+.|-..=|...++...++.++..
T Consensus 904 -------~~~g~~--~~~~~~~~R----y~~~~~W~~~F~~lLN~~~~~~p~l~~lr~~~~~~~~~ 956 (974)
T KOG1166|consen 904 -------VKNGSS--WMVKTNFPR----YWKRDMWNKFFDLLLNPDCDTLPNLQELRTELEEVLAE 956 (974)
T ss_pred -------hcCCcc--eeccccchh----hhhHHHHHHHHHHHhCcCcccchhHHHHHHHHHHHHHH
Confidence 111111 111221221 122333 4677778886666668888888888777654
No 418
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.87 E-value=2.1e-21 Score=172.40 Aligned_cols=236 Identities=23% Similarity=0.273 Sum_probs=145.0
Q ss_pred CcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCc---ccHHHHHHHHHHhhcCCC----------Cccceee
Q 035862 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL---QGHKQWLAEVQFLGVVSH----------PNLVKLL 140 (393)
Q Consensus 74 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h----------~niv~~~ 140 (393)
+.....||.|+++.||.+++..++ ..+++|+...... ...+.+.+|.-....+.+ -.++-.+
T Consensus 14 l~~~~~i~~g~~~~v~~v~d~~t~-----~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~ 88 (288)
T PF14531_consen 14 LVRGRIIGKGGFSIVFEVTDVETG-----EEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPL 88 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTT-----EEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---S
T ss_pred EEEccccccCCceEEEEEEEccCC-----ceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeee
Confidence 456678999999999999976544 4599988753322 234555555544444322 1222222
Q ss_pred eeeecC---------Cccc----ceEEEEEeecCCCChHHHHh---hcCCC--CCCHHHHHHHHHHHHHHHHHhhcCCCC
Q 035862 141 GYCSTE---------DERG----IQRLLVYEYMPNRSLEDRLF---SRAQP--TLPWKTRLEIILGAAEGLAYLHEGLEI 202 (393)
Q Consensus 141 ~~~~~~---------~~~~----~~~~lv~e~~~~~~L~~~l~---~~~~~--~~~~~~~~~i~~ql~~~l~~LH~~~~~ 202 (393)
+..... .... ...+++|+-+ .++|.+++. ..... .+.......+..|++..+++||+.
T Consensus 89 d~~~i~~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~--- 164 (288)
T PF14531_consen 89 DLLRIPGKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSY--- 164 (288)
T ss_dssp EEEEETTS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---
T ss_pred EEEEEcCCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhc---
Confidence 222211 1000 0236778877 558887752 22222 233444566778999999999999
Q ss_pred CeEeccCCCCCeEeCCCCceEEeeccCCccCCCCCCccccccccccCCccCcccccc--------CCCCchhhHHHHHHH
Q 035862 203 QVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIET--------GHLKSQSDIWSFGVV 274 (393)
Q Consensus 203 ~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~DiwslGvi 274 (393)
|+||+||+|+|++++.+|.++|+||+......... .....+..|.+||.... ..++.+.|.|+||++
T Consensus 165 GlVHgdi~~~nfll~~~G~v~Lg~F~~~~r~g~~~-----~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ 239 (288)
T PF14531_consen 165 GLVHGDIKPENFLLDQDGGVFLGDFSSLVRAGTRY-----RCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGIT 239 (288)
T ss_dssp TEEEST-SGGGEEE-TTS-EEE--GGGEEETTEEE-----EGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHH
T ss_pred ceEecccceeeEEEcCCCCEEEcChHHHeecCcee-----eccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHH
Confidence 99999999999999999999999998876533211 11344578999997743 257889999999999
Q ss_pred HHHHHhCCCccCCCCchhhhHHHHHHhhcCcCCcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCC
Q 035862 275 LYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEER 345 (393)
Q Consensus 275 l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R 345 (393)
+|.|++|..||....+.... ...-..+. ++++.+..||..+|+++|.+|
T Consensus 240 ly~lWC~~lPf~~~~~~~~~---------------------~~~f~~C~-~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 240 LYSLWCGRLPFGLSSPEADP---------------------EWDFSRCR-DMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp HHHHHHSS-STCCCGGGSTS---------------------GGGGTTSS----HHHHHHHHHHT-SSGGGS
T ss_pred HHHHHHccCCCCCCCccccc---------------------cccchhcC-CcCHHHHHHHHHHccCCcccC
Confidence 99999999999754322110 00112334 688999999999999999987
No 419
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.87 E-value=3.8e-23 Score=194.82 Aligned_cols=229 Identities=29% Similarity=0.393 Sum_probs=181.9
Q ss_pred eecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCccc--HHHHHHHHHHhhcCC-CCccceeeeeeecCCcccceEEE
Q 035862 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQG--HKQWLAEVQFLGVVS-HPNLVKLLGYCSTEDERGIQRLL 155 (393)
Q Consensus 79 ~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~~l 155 (393)
.+|+|+||.|++++- ......+..+++|++.+..... ......|..++..++ ||.++++...+..+. .+++
T Consensus 1 vlg~g~~gkvfLvrk--~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~----kl~l 74 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRK--AGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDG----KLYL 74 (612)
T ss_pred CCCcCCCcchHHHHH--hccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeecccc----chhH
Confidence 379999999998642 3345567789999887653221 123456888888887 999999999888877 4599
Q ss_pred EEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCCccCCC
Q 035862 156 VYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPT 235 (393)
Q Consensus 156 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~ 235 (393)
++++..||.|...+ .....+.+.....+...++-+++++|+. +++|||+|++||+++.+|.+++.|||+++....
T Consensus 75 ~ld~~rgg~lft~l--~~~~~f~~~~~~~~~aelaLald~lh~l---~iiyrd~k~enilld~~Ghi~~tdfglske~v~ 149 (612)
T KOG0603|consen 75 ILDFLRGGDLFTRL--SKEVMFDELDVAFYLAELALALDHLHKL---GIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVK 149 (612)
T ss_pred hhhhcccchhhhcc--ccCCchHHHHHHHHHHHHHHHHhhcchh---HHHHhcccccceeecccCccccCCchhhhHhHh
Confidence 99999999998877 4445677778888889999999999998 999999999999999999999999999986543
Q ss_pred CCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcCCcccccccC
Q 035862 236 GDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKFSMMID 315 (393)
Q Consensus 236 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (393)
.. ..+||..|||||++. .....+|.||+|++++||+||..||.. .. +..++
T Consensus 150 ~~------~~cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~------~~----~~~Il----------- 200 (612)
T KOG0603|consen 150 EK------IACGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG------DT----MKRIL----------- 200 (612)
T ss_pred hh------hcccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch------HH----HHHHh-----------
Confidence 32 128999999999998 567889999999999999999999975 11 11111
Q ss_pred cccccccCHHHHHHHHHHHHHhcccCCCCCCCH
Q 035862 316 PRLRNQYSINAARRVAKLADNCLKKNPEERPTM 348 (393)
Q Consensus 316 ~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~ 348 (393)
......+...+..+.+++..++..+|.+|...
T Consensus 201 -~~~~~~p~~l~~~a~~~~~~l~~r~p~nrLg~ 232 (612)
T KOG0603|consen 201 -KAELEMPRELSAEARSLFRQLFKRNPENRLGA 232 (612)
T ss_pred -hhccCCchhhhHHHHHHHHHHHhhCHHHHhcc
Confidence 11223455678889999999999999999765
No 420
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.87 E-value=7e-22 Score=176.30 Aligned_cols=205 Identities=21% Similarity=0.304 Sum_probs=144.7
Q ss_pred CCCccceeeeeeecCC-----------------------cccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHH
Q 035862 132 SHPNLVKLLGYCSTED-----------------------ERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILG 188 (393)
Q Consensus 132 ~h~niv~~~~~~~~~~-----------------------~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~q 188 (393)
.|||||.+.++|.++- .....+|+||.-+. .+|.+++..+ ..+.....-++.|
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~-~tLr~yl~~~---~~s~r~~~~~laQ 349 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYR-QTLREYLWTR---HRSYRTGRVILAQ 349 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcch-hhHHHHHhcC---CCchHHHHHHHHH
Confidence 5999999998875432 12346689998884 4999998443 3566778889999
Q ss_pred HHHHHHHhhcCCCCCeEeccCCCCCeEe--CCCC--ceEEeeccCCccCCCCCCc----cccccccccCCccCccccccC
Q 035862 189 AAEGLAYLHEGLEIQVIYRDFKTSNVLL--DGNF--KPKLSDFGLAREGPTGDHT----HVSTAVVGTYGYAAPEYIETG 260 (393)
Q Consensus 189 l~~~l~~LH~~~~~~ivH~Dikp~NIll--~~~~--~~kl~Dfg~a~~~~~~~~~----~~~~~~~gt~~y~aPE~~~~~ 260 (393)
+++|+.|||++ ||.|||+|.+|||+ ++|+ .+.|+|||++-......-. ......-|...-||||+....
T Consensus 350 lLEav~hL~~h---gvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~ 426 (598)
T KOG4158|consen 350 LLEAVTHLHKH---GVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAV 426 (598)
T ss_pred HHHHHHHHHHc---cchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhcC
Confidence 99999999999 99999999999999 4444 4789999987532221110 111234567788999988543
Q ss_pred C------CCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcCCcccccccCcccccccCHHHHHHHHHHH
Q 035862 261 H------LKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLA 334 (393)
Q Consensus 261 ~------~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 334 (393)
+ --.++|.|+.|.+.||+++...||....+..-.. ... ........+..++..+.+++
T Consensus 427 PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~------------r~Y----qe~qLPalp~~vpp~~rqlV 490 (598)
T KOG4158|consen 427 PGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDT------------RTY----QESQLPALPSRVPPVARQLV 490 (598)
T ss_pred CCCceeeccchhhhhhhhhhHHHHhccCCcccccchheech------------hhh----hhhhCCCCcccCChHHHHHH
Confidence 2 1248999999999999999999997632211000 000 00111223345678899999
Q ss_pred HHhcccCCCCCCCHHHHHHHHHHHH
Q 035862 335 DNCLKKNPEERPTMNQVVESLKLAV 359 (393)
Q Consensus 335 ~~~l~~dp~~Rps~~~~l~~l~~~~ 359 (393)
..+|+.||++|++..-..+-+...+
T Consensus 491 ~~lL~r~pskRvsp~iAANvl~LsL 515 (598)
T KOG4158|consen 491 FDLLKRDPSKRVSPNIAANVLNLSL 515 (598)
T ss_pred HHHhcCCccccCCccHHHhHHHHHH
Confidence 9999999999999877777665544
No 421
>PRK10345 hypothetical protein; Provisional
Probab=99.86 E-value=5.8e-21 Score=164.17 Aligned_cols=141 Identities=15% Similarity=0.211 Sum_probs=106.6
Q ss_pred CcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcccHHHHHHHHHHhhcC-----CCCccceeeeeeecCCc
Q 035862 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVV-----SHPNLVKLLGYCSTEDE 148 (393)
Q Consensus 74 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-----~h~niv~~~~~~~~~~~ 148 (393)
+.-...||+|+||.||. +..+. . .+||++........+.+.+|+.+++.+ .||||+++++++.++..
T Consensus 4 L~~~~~LG~G~~~~Vy~--hp~~~-----~-k~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g 75 (210)
T PRK10345 4 LSEQSPLGTGRHRKCYA--HPEDA-----Q-RCIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCG 75 (210)
T ss_pred cCCcceecCCCceEEEE--CCCCc-----C-eEEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCC
Confidence 34456899999999995 33222 1 368887765444567789999999999 57999999999988754
Q ss_pred ccceEEEEEee--cCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHH-HHhhcCCCCCeEeccCCCCCeEeCC----CCc
Q 035862 149 RGIQRLLVYEY--MPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGL-AYLHEGLEIQVIYRDFKTSNVLLDG----NFK 221 (393)
Q Consensus 149 ~~~~~~lv~e~--~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l-~~LH~~~~~~ivH~Dikp~NIll~~----~~~ 221 (393)
.+....+|+|| +.+++|.+++.+ ..+++. ..++.|++.++ +|||++ +|+||||||+|||++. ++.
T Consensus 76 ~g~v~~~I~e~~G~~~~tL~~~l~~---~~~~e~--~~~~~~~L~~l~~yLh~~---~IvhrDlKp~NILl~~~~~~~~~ 147 (210)
T PRK10345 76 TGYVYDVIADFDGKPSITLTEFAEQ---CRYEED--VAQLRQLLKKLKRYLLDN---RIVTMELKPQNILCQRISESEVI 147 (210)
T ss_pred CeEEEEEEecCCCCcchhHHHHHHc---ccccHh--HHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEeccCCCCCc
Confidence 43334478999 457999999943 235555 35677888777 999999 9999999999999974 347
Q ss_pred eEEeeccCC
Q 035862 222 PKLSDFGLA 230 (393)
Q Consensus 222 ~kl~Dfg~a 230 (393)
++|+||+.+
T Consensus 148 ~~LiDg~G~ 156 (210)
T PRK10345 148 PVVCDNIGE 156 (210)
T ss_pred EEEEECCCC
Confidence 999995443
No 422
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.85 E-value=1.5e-20 Score=158.64 Aligned_cols=186 Identities=18% Similarity=0.124 Sum_probs=135.1
Q ss_pred ccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcc----cHHHHHHHHHHhhcCC-CCccceeeeeeecCCccc
Q 035862 76 RMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQ----GHKQWLAEVQFLGVVS-HPNLVKLLGYCSTEDERG 150 (393)
Q Consensus 76 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~----~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~ 150 (393)
+...|++|+||+||.+.. .+..++.+.+...... ....+.+|+++|+++. |+++.+++++ +
T Consensus 6 ~~~~l~~~~f~~v~~~~~-------~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~--- 71 (218)
T PRK12274 6 VNEPLKSDTFGRILLVRG-------GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----D--- 71 (218)
T ss_pred cceeecCCCcceEEEeec-------CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----c---
Confidence 456899999999997652 2234666666544321 1124678999999996 5889999886 1
Q ss_pred ceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccC-CCCCeEeCCCCceEEeeccC
Q 035862 151 IQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDF-KTSNVLLDGNFKPKLSDFGL 229 (393)
Q Consensus 151 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Di-kp~NIll~~~~~~kl~Dfg~ 229 (393)
..+++|||+.|.+|...+. . ....++.|++.+|.++|++ ||+|||| ||+|||++.+|.++|+|||+
T Consensus 72 -~~~lvmeyI~G~~L~~~~~--------~-~~~~~~~qi~~~L~~lH~~---GIvHrDL~kp~NILv~~~g~i~LIDFG~ 138 (218)
T PRK12274 72 -GRHLDRSYLAGAAMYQRPP--------R-GDLAYFRAARRLLQQLHRC---GVAHNDLAKEANWLVQEDGSPAVIDFQL 138 (218)
T ss_pred -CEEEEEeeecCccHHhhhh--------h-hhHHHHHHHHHHHHHHHHC---cCccCCCCCcceEEEcCCCCEEEEECCC
Confidence 2389999999999875431 1 1135788999999999999 9999999 79999999999999999999
Q ss_pred CccCCCCCCc----c-------ccccccccCCccCccccccC-CCC-chhhHHHHHHHHHHHHhCCCccCCC
Q 035862 230 AREGPTGDHT----H-------VSTAVVGTYGYAAPEYIETG-HLK-SQSDIWSFGVVLYEILTGRRVLERN 288 (393)
Q Consensus 230 a~~~~~~~~~----~-------~~~~~~gt~~y~aPE~~~~~-~~~-~~~DiwslGvil~elltg~~pf~~~ 288 (393)
+......... . .......++.|++|+...-. ..+ ...+.++.|+-+|.++|+..++...
T Consensus 139 A~~~~~~~~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~ 210 (218)
T PRK12274 139 AVRGNPRARWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWED 210 (218)
T ss_pred ceecCCcchHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCcccc
Confidence 9865433210 0 00112367778888754322 233 5679999999999999999887544
No 423
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.84 E-value=1.5e-20 Score=177.30 Aligned_cols=219 Identities=26% Similarity=0.422 Sum_probs=163.6
Q ss_pred hhcCCCCccceeeeeeecCCcccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCe-Ee
Q 035862 128 LGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQV-IY 206 (393)
Q Consensus 128 l~~l~h~niv~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~i-vH 206 (393)
|+.+.|.|+.+++|.+.... ..+.|.+||..|+|.|.+... ...+++.....++++++.||.|||.. .| +|
T Consensus 1 l~~l~h~n~~~f~g~~~~~~----~~~~i~~~c~rGsl~D~i~~~-~~~~d~~F~~s~~rdi~~Gl~ylh~s---~i~~h 72 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGP----EMIVIWEYCSRGSLLDILSNE-DIKLDYFFILSFIRDISKGLAYLHNS---PIGYH 72 (484)
T ss_pred CcccchhhhhhheeeEecCC----ceEEEEeeecCccHHhHHhcc-ccCccHHHHHHHHHHHHHHHHHHhcC---cceee
Confidence 46789999999999999885 458999999999999999653 45588889999999999999999987 44 99
Q ss_pred ccCCCCCeEeCCCCceEEeeccCCccCCCCCCccccccccccCCccCccccccC-------CCCchhhHHHHHHHHHHHH
Q 035862 207 RDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIETG-------HLKSQSDIWSFGVVLYEIL 279 (393)
Q Consensus 207 ~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-------~~~~~~DiwslGvil~ell 279 (393)
+.+++.|.+++..-.+||+|||+.................-..-|.|||.+.+. ..+.+.||||+|++++|++
T Consensus 73 g~l~s~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~ 152 (484)
T KOG1023|consen 73 GALKSSNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEIL 152 (484)
T ss_pred eeeccccceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHH
Confidence 999999999999999999999998776431111111222334579999999763 1467799999999999999
Q ss_pred hCCCccCCCCchhh-hHHHHHHhhcCcCCcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q 035862 280 TGRRVLERNRPTME-QKLLEWVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLA 358 (393)
Q Consensus 280 tg~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~ 358 (393)
+...||........ ..++..+.. .+. ..+.+.+.... ...+++..++..||..+|.+||+++++-..+..+
T Consensus 153 ~r~~~~~~~~~~~~~~eii~~~~~---~~~---~~~rP~i~~~~--e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~ 224 (484)
T KOG1023|consen 153 FRSGPFDLRNLVEDPDEIILRVKK---GGS---NPFRPSIELLN--ELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTI 224 (484)
T ss_pred hccCccccccccCChHHHHHHHHh---cCC---CCcCcchhhhh--hcchHHHHHHHHhcccChhhCccHHHHHhhhhhh
Confidence 99999976433322 222222222 011 11112111111 3445789999999999999999999999988877
Q ss_pred Hhhh
Q 035862 359 VQES 362 (393)
Q Consensus 359 ~~~~ 362 (393)
....
T Consensus 225 ~~~~ 228 (484)
T KOG1023|consen 225 NKGG 228 (484)
T ss_pred cccc
Confidence 6543
No 424
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.83 E-value=2e-21 Score=179.92 Aligned_cols=178 Identities=26% Similarity=0.360 Sum_probs=132.4
Q ss_pred eEEEEEeecCCCChHHHHhh-cCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCC
Q 035862 152 QRLLVYEYMPNRSLEDRLFS-RAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLA 230 (393)
Q Consensus 152 ~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a 230 (393)
++|+.|++|...+|.+||.. ......++...+.++.|++.|+.| + +.+|+|+||.||+...+..+||.|||+.
T Consensus 330 ~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k---~~ihrdlkp~nif~~~d~q~kIgDFgl~ 403 (516)
T KOG1033|consen 330 YLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---K---GLIHRDLKPSNIFFSDDDQLKIGDFGLV 403 (516)
T ss_pred chhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---c---cchhhhccccccccccchhhhhhhhhhe
Confidence 57899999999999999963 334556788899999999999999 5 9999999999999999999999999998
Q ss_pred ccCCCCC----CccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhC-CCccCCCCchhhhHHHHHHhhcCc
Q 035862 231 REGPTGD----HTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTG-RRVLERNRPTMEQKLLEWVKQFPA 305 (393)
Q Consensus 231 ~~~~~~~----~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg-~~pf~~~~~~~~~~~~~~~~~~~~ 305 (393)
....... .....+..+||.+||+||.+.+..|+.++||||||++|+||+.- ...|+. ....
T Consensus 404 ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~er------~~t~-------- 469 (516)
T KOG1033|consen 404 TSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFER------IATL-------- 469 (516)
T ss_pred eecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHHH------HHhh--------
Confidence 7655444 12244567999999999999999999999999999999999982 111110 0000
Q ss_pred CCcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 035862 306 DGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESL 355 (393)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l 355 (393)
..+.+..+....-.+. ++-..|+.++|.+.|.+||++.+..-+.
T Consensus 470 -----~d~r~g~ip~~~~~d~-p~e~~ll~~lls~~p~~RP~~~~~~~~~ 513 (516)
T KOG1033|consen 470 -----TDIRDGIIPPEFLQDY-PEEYTLLQQLLSPSPEERPSAIEVALHE 513 (516)
T ss_pred -----hhhhcCCCChHHhhcC-cHHHHHHHHhcCCCcccCchHHHHhhhh
Confidence 0011111110111111 3345799999999999999666655444
No 425
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.83 E-value=1.3e-20 Score=186.34 Aligned_cols=211 Identities=27% Similarity=0.377 Sum_probs=146.1
Q ss_pred hcCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcccHHHHHHHHHHhhcCCCCccceeeeeeecCCccc
Q 035862 71 TNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERG 150 (393)
Q Consensus 71 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 150 (393)
.++|..++.|..|++|.||.++++.+.. .+|+ ++++.... .+- ++.....|.+
T Consensus 82 e~df~~IklisngAygavylvrh~~trq-----rfa~-kiNkq~li-----lRn--ilt~a~npfv-------------- 134 (1205)
T KOG0606|consen 82 ESDFNTIKLISNGAYGAVYLVRHKETRQ-----RFAM-KINKQNLI-----LRN--ILTFAGNPFV-------------- 134 (1205)
T ss_pred ccccceeEeeccCCCCceeeeecccccc-----chhh-cccccchh-----hhc--cccccCCcce--------------
Confidence 4689999999999999999998765544 3787 44443221 110 2222233322
Q ss_pred ceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCC
Q 035862 151 IQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLA 230 (393)
Q Consensus 151 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a 230 (393)
| |+-...+ ...+.++... +.+++|||+- ||+|||+||+|.+|+.-|.+|++|||++
T Consensus 135 -----v------gDc~tll--k~~g~lPvdm--------vla~Eylh~y---givhrdlkpdnllIT~mGhiKlTDfgLs 190 (1205)
T KOG0606|consen 135 -----V------GDCATLL--KNIGPLPVDM--------VLAVEYLHSY---GIVHRDLKPDNLLITSMGHIKLTDFGLS 190 (1205)
T ss_pred -----e------chhhhhc--ccCCCCcchh--------hHHhHhhccC---CeecCCCCCCcceeeecccccccchhhh
Confidence 2 3444444 2234455443 7789999998 9999999999999999999999999998
Q ss_pred ccCCCCCCcc-------------ccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHH
Q 035862 231 REGPTGDHTH-------------VSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLL 297 (393)
Q Consensus 231 ~~~~~~~~~~-------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~ 297 (393)
.......... .....+||+.|+|||++.-+.|...+|+|++|+|+||.+-|+.||.+..++. .+.
T Consensus 191 k~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpee--lfg 268 (1205)
T KOG0606|consen 191 KKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEE--LFG 268 (1205)
T ss_pred hhhhhhccchhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHH--HHh
Confidence 7532111100 1124599999999999999999999999999999999999999998765542 222
Q ss_pred HHHhhcCcCCcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCC
Q 035862 298 EWVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPT 347 (393)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps 347 (393)
..+........ -....+.++++++.++|+.+|..|.-
T Consensus 269 ~visd~i~wpE-------------~dea~p~Ea~dli~~LL~qnp~~Rlg 305 (1205)
T KOG0606|consen 269 QVISDDIEWPE-------------EDEALPPEAQDLIEQLLRQNPLCRLG 305 (1205)
T ss_pred hhhhhhccccc-------------cCcCCCHHHHHHHHHHHHhChHhhcc
Confidence 22211111000 01124578999999999999999954
No 426
>smart00090 RIO RIO-like kinase.
Probab=99.80 E-value=2.8e-19 Score=157.51 Aligned_cols=141 Identities=17% Similarity=0.103 Sum_probs=106.9
Q ss_pred CCcccceecccCCceEEEEE-EcCCCCCCCceEEEEEEecCCCcc------------------------cHHHHHHHHHH
Q 035862 73 GFNRMLKIGEGGFGSVYKGT-IRPLDGRGEPLVVAVKKLNNHGLQ------------------------GHKQWLAEVQF 127 (393)
Q Consensus 73 ~y~~~~~lg~G~~g~Vy~~~-~~~~~~~~~~~~vavK~~~~~~~~------------------------~~~~~~~E~~~ 127 (393)
.|.+.+.||+|+||.||+|. +.. .+..||+|.+...... ....+..|+.+
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~-----~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~ 103 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDG-----SGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRN 103 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCC-----CCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHH
Confidence 48899999999999999998 322 2346999988753210 01234579999
Q ss_pred hhcCCCCc--cceeeeeeecCCcccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCC-e
Q 035862 128 LGVVSHPN--LVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQ-V 204 (393)
Q Consensus 128 l~~l~h~n--iv~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~-i 204 (393)
+..+.+.+ +.+++++ .. .++||||+.|.+|..+.. ....+....+..++.|++.++.+||+. | +
T Consensus 104 L~~L~~~~i~~p~~~~~---~~-----~~lV~E~~~g~~L~~~~~--~~~~~~~~~~~~i~~qi~~~l~~LH~~---g~i 170 (237)
T smart00090 104 LQRLYEAGVPVPKPIAW---RR-----NVLVMEFIGGDGLPAPRL--KDVEPEEEEEFELYDDILEEMRKLYKE---GEL 170 (237)
T ss_pred HHHHHhcCCCCCeeeEe---cC-----ceEEEEEecCCccccccc--ccCCcchHHHHHHHHHHHHHHHHHHhc---CCE
Confidence 99997532 3344432 11 289999999988876542 223456666789999999999999998 9 9
Q ss_pred EeccCCCCCeEeCCCCceEEeeccCCcc
Q 035862 205 IYRDFKTSNVLLDGNFKPKLSDFGLARE 232 (393)
Q Consensus 205 vH~Dikp~NIll~~~~~~kl~Dfg~a~~ 232 (393)
+||||||+||+++ ++.++|+|||.+..
T Consensus 171 iH~Dikp~NIli~-~~~i~LiDFg~a~~ 197 (237)
T smart00090 171 VHGDLSEYNILVH-DGKVVIIDVSQSVE 197 (237)
T ss_pred EeCCCChhhEEEE-CCCEEEEEChhhhc
Confidence 9999999999999 88999999998864
No 427
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.79 E-value=1.8e-18 Score=150.77 Aligned_cols=134 Identities=22% Similarity=0.265 Sum_probs=106.2
Q ss_pred ceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcc--------cHHHHHHHHHHhhcCCCCccceeeeeeecCCcc
Q 035862 78 LKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQ--------GHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDER 149 (393)
Q Consensus 78 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~--------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 149 (393)
+.||+|++|.||+|.+... .+++|........ ....+.+|+.++..+.|+++.....++...+.
T Consensus 2 ~~l~~G~~~~vy~~~~~~~-------~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~- 73 (211)
T PRK14879 2 KLIKRGAEAEIYLGDFLGI-------KAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPEN- 73 (211)
T ss_pred cccccCceEEEEEEeeCCC-------ceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCC-
Confidence 5799999999999986321 2778875543211 12346789999999999988776666554443
Q ss_pred cceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccC
Q 035862 150 GIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGL 229 (393)
Q Consensus 150 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~ 229 (393)
.+++|||++|++|.+++.... . .+..++.+++.+|.++|+. +++|+|++|+|||++ ++.++|+|||.
T Consensus 74 ---~~lv~e~~~G~~L~~~~~~~~-----~-~~~~i~~~i~~~l~~lH~~---~i~H~Dl~p~Nil~~-~~~~~liDf~~ 140 (211)
T PRK14879 74 ---FIIVMEYIEGEPLKDLINSNG-----M-EELELSREIGRLVGKLHSA---GIIHGDLTTSNMILS-GGKIYLIDFGL 140 (211)
T ss_pred ---CEEEEEEeCCcCHHHHHHhcc-----H-HHHHHHHHHHHHHHHHHhC---CcccCCCCcccEEEE-CCCEEEEECCc
Confidence 389999999999999884321 2 7788999999999999998 999999999999999 78999999998
Q ss_pred Ccc
Q 035862 230 ARE 232 (393)
Q Consensus 230 a~~ 232 (393)
+..
T Consensus 141 a~~ 143 (211)
T PRK14879 141 AEF 143 (211)
T ss_pred ccC
Confidence 864
No 428
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.78 E-value=2.3e-18 Score=148.64 Aligned_cols=130 Identities=22% Similarity=0.317 Sum_probs=99.6
Q ss_pred eecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcc--------cHHHHHHHHHHhhcCCCCccceeeeeeecCCccc
Q 035862 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQ--------GHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERG 150 (393)
Q Consensus 79 ~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~--------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 150 (393)
.||+|+||.||+|.+.. ..+++|........ ...++.+|++++..+.|+++.....++...+.
T Consensus 1 ~ig~G~~~~vy~~~~~~-------~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~-- 71 (199)
T TIGR03724 1 LIAKGAEAIIYLGDFLG-------LKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDN-- 71 (199)
T ss_pred CCCCCceEEEEEeecCC-------ccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCC--
Confidence 48999999999998432 23788875432211 12456689999999988765544444443332
Q ss_pred ceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCC
Q 035862 151 IQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLA 230 (393)
Q Consensus 151 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a 230 (393)
.++||||++|++|.+++.... ..++.+++.+|.+||+. |++|+|++|+||+++ ++.++++|||++
T Consensus 72 --~~lv~e~~~g~~l~~~~~~~~---------~~~~~~i~~~l~~lH~~---gi~H~Dl~~~Nil~~-~~~~~liDfg~a 136 (199)
T TIGR03724 72 --KTIVMEYIEGKPLKDVIEEGN---------DELLREIGRLVGKLHKA---GIVHGDLTTSNIIVR-DDKLYLIDFGLG 136 (199)
T ss_pred --CEEEEEEECCccHHHHHhhcH---------HHHHHHHHHHHHHHHHC---CeecCCCCcceEEEE-CCcEEEEECCCC
Confidence 389999999999998873211 07899999999999998 999999999999999 899999999998
Q ss_pred cc
Q 035862 231 RE 232 (393)
Q Consensus 231 ~~ 232 (393)
..
T Consensus 137 ~~ 138 (199)
T TIGR03724 137 KY 138 (199)
T ss_pred cC
Confidence 75
No 429
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.76 E-value=5e-18 Score=167.83 Aligned_cols=136 Identities=24% Similarity=0.275 Sum_probs=106.5
Q ss_pred cCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEec-CC-Cc------ccHHHHHHHHHHhhcCCCCccceeeeee
Q 035862 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLN-NH-GL------QGHKQWLAEVQFLGVVSHPNLVKLLGYC 143 (393)
Q Consensus 72 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~-~~-~~------~~~~~~~~E~~~l~~l~h~niv~~~~~~ 143 (393)
..|...+.||+|+||+||+|.+.... +++|+.. +. .. .....+.+|+++++.++|++++....++
T Consensus 333 ~~~~~~~~iG~G~~g~Vy~~~~~~~~-------~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~ 405 (535)
T PRK09605 333 RRKIPDHLIGKGAEADIKKGEYLGRD-------AVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYD 405 (535)
T ss_pred cccCccceeccCCcEEEEEEeecCcc-------ceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEE
Confidence 44567889999999999999864322 2233221 11 10 1124577899999999999998877666
Q ss_pred ecCCcccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceE
Q 035862 144 STEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPK 223 (393)
Q Consensus 144 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~k 223 (393)
..... .++||||++|++|.+++. ....++.+++.+|.+||+. +++||||||+|||+ +++.++
T Consensus 406 ~~~~~----~~lv~E~~~g~~L~~~l~----------~~~~~~~~i~~~L~~lH~~---giiHrDlkp~NILl-~~~~~~ 467 (535)
T PRK09605 406 VDPEE----KTIVMEYIGGKDLKDVLE----------GNPELVRKVGEIVAKLHKA---GIVHGDLTTSNFIV-RDDRLY 467 (535)
T ss_pred EeCCC----CEEEEEecCCCcHHHHHH----------HHHHHHHHHHHHHHHHHhC---CCccCCCChHHEEE-ECCcEE
Confidence 65443 389999999999999883 3567899999999999998 99999999999999 678999
Q ss_pred EeeccCCcc
Q 035862 224 LSDFGLARE 232 (393)
Q Consensus 224 l~Dfg~a~~ 232 (393)
|+|||+++.
T Consensus 468 liDFGla~~ 476 (535)
T PRK09605 468 LIDFGLGKY 476 (535)
T ss_pred EEeCccccc
Confidence 999999875
No 430
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.73 E-value=2.9e-17 Score=141.54 Aligned_cols=137 Identities=18% Similarity=0.103 Sum_probs=104.3
Q ss_pred CCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcc----------------------cHHHHHHHHHHhhc
Q 035862 73 GFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQ----------------------GHKQWLAEVQFLGV 130 (393)
Q Consensus 73 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~----------------------~~~~~~~E~~~l~~ 130 (393)
.|.+.+.||+|+||.||++... ++..|++|++...... ....+..|+.++..
T Consensus 16 ~~~~~~~i~~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~ 89 (198)
T cd05144 16 VESLGNQIGVGKESDVYLALDP------DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKA 89 (198)
T ss_pred hhhcCCccccCcceEEEEEEcC------CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHH
Confidence 4888899999999999999753 2346999986543210 01125678888888
Q ss_pred CCCCc--cceeeeeeecCCcccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecc
Q 035862 131 VSHPN--LVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRD 208 (393)
Q Consensus 131 l~h~n--iv~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~D 208 (393)
+.|++ +...++. . ..++||||++|++|.+... ......++.+++.++.++|+. |++|||
T Consensus 90 l~~~~i~v~~~~~~----~----~~~lv~e~~~g~~L~~~~~--------~~~~~~~~~~i~~~l~~lh~~---gi~H~D 150 (198)
T cd05144 90 LYEEGFPVPKPIDW----N----RHAVVMEYIDGVELYRVRV--------LEDPEEVLDEILEEIVKAYKH---GIIHGD 150 (198)
T ss_pred HHHcCCCCCceeec----C----CceEEEEEeCCcchhhccc--------cccHHHHHHHHHHHHHHHHHC---CCCcCC
Confidence 87774 4444432 1 2389999999999876541 024567889999999999998 999999
Q ss_pred CCCCCeEeCCCCceEEeeccCCccCC
Q 035862 209 FKTSNVLLDGNFKPKLSDFGLAREGP 234 (393)
Q Consensus 209 ikp~NIll~~~~~~kl~Dfg~a~~~~ 234 (393)
|||+||++++++.++|+|||.+....
T Consensus 151 l~p~Nill~~~~~~~liDfg~~~~~~ 176 (198)
T cd05144 151 LSEFNILVDDDEKIYIIDWPQMVSTD 176 (198)
T ss_pred CCcccEEEcCCCcEEEEECCccccCC
Confidence 99999999999999999999986543
No 431
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.73 E-value=3.4e-19 Score=175.78 Aligned_cols=263 Identities=24% Similarity=0.291 Sum_probs=195.4
Q ss_pred CCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCC--cccHHHHHHHHHHhhcCC-CCccceeeeeeecCCcc
Q 035862 73 GFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG--LQGHKQWLAEVQFLGVVS-HPNLVKLLGYCSTEDER 149 (393)
Q Consensus 73 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~ 149 (393)
.|...+.||+|+|+.|-..... ......++.|.+.... .........|..+-..++ |+|++.+++.....+.
T Consensus 21 ~~~~~~~ig~gs~~~~~~~~~~----~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~- 95 (601)
T KOG0590|consen 21 QYKLSRSIGKGSFSSSALASNS----RDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRS- 95 (601)
T ss_pred cccccccccccccchhhhhhhc----CCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCcc-
Confidence 4777778999999999776542 2233456766665442 222334445777777787 9999999998877764
Q ss_pred cceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhh-cCCCCCeEeccCCCCCeEeCCCC-ceEEeec
Q 035862 150 GIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLH-EGLEIQVIYRDFKTSNVLLDGNF-KPKLSDF 227 (393)
Q Consensus 150 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH-~~~~~~ivH~Dikp~NIll~~~~-~~kl~Df 227 (393)
.+++++|..|+++.+.+........+...+..++.|+..++.|+| .. ++.|+||||+|.+++..+ .++++||
T Consensus 96 ---~~~~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~---~~~h~~ikP~n~~l~~s~~~l~~~df 169 (601)
T KOG0590|consen 96 ---YLLSLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPEN---GVTHRDIKPSNSLLDESGSALKIADF 169 (601)
T ss_pred ---cccccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCccc---ccccCCCCCccchhccCCCcccCCCc
Confidence 488999999999998773222224566777889999999999999 77 999999999999999999 9999999
Q ss_pred cCCccCCC-CCCccccccccc-cCCccCccccccC-CCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcC
Q 035862 228 GLAREGPT-GDHTHVSTAVVG-TYGYAAPEYIETG-HLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFP 304 (393)
Q Consensus 228 g~a~~~~~-~~~~~~~~~~~g-t~~y~aPE~~~~~-~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~ 304 (393)
|+|..... .+........+| ++.|+|||...+. ......|+||.|+++.-+++|..|+........ ....|....
T Consensus 170 ~~At~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~-~~~~~~~~~- 247 (601)
T KOG0590|consen 170 GLATAYRNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDG-RYSSWKSNK- 247 (601)
T ss_pred hhhccccccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccc-cceeecccc-
Confidence 99987666 444445566788 9999999999884 556789999999999999999999875443221 111111100
Q ss_pred cCCcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHH
Q 035862 305 ADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLAV 359 (393)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~~ 359 (393)
.......-...+....+++.+++..+|..|.+.+++-...|...
T Consensus 248 -----------~~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~d~~~~~ 291 (601)
T KOG0590|consen 248 -----------GRFTQLPWNSISDQAHDLLHKILKENPSNRLSIEELKLDNWLSS 291 (601)
T ss_pred -----------cccccCccccCChhhhhcccccccCCchhccccccccccccccc
Confidence 00001111234567888999999999999999999999988776
No 432
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.71 E-value=1.8e-16 Score=139.98 Aligned_cols=138 Identities=18% Similarity=0.161 Sum_probs=102.3
Q ss_pred ceec-ccCCceEEEEEEcCCCCCCCceEEEEEEecCCC-------------cccHHHHHHHHHHhhcCCCCcc--ceeee
Q 035862 78 LKIG-EGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG-------------LQGHKQWLAEVQFLGVVSHPNL--VKLLG 141 (393)
Q Consensus 78 ~~lg-~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-------------~~~~~~~~~E~~~l~~l~h~ni--v~~~~ 141 (393)
..|| .|+.|+||.+.... ..+++|...... ......+.+|+.++..+.|++| +..++
T Consensus 37 ~~lg~~~g~gtv~~v~~~~-------~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~ 109 (239)
T PRK01723 37 RVVGSAKGRGTTWFVQTPG-------VNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIA 109 (239)
T ss_pred ceeecCCCCccEEEEEeCC-------ceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEe
Confidence 4687 88889999887531 237888764321 1223457789999999998775 66776
Q ss_pred eeecCCcccceEEEEEeecCC-CChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCC
Q 035862 142 YCSTEDERGIQRLLVYEYMPN-RSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNF 220 (393)
Q Consensus 142 ~~~~~~~~~~~~~lv~e~~~~-~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~ 220 (393)
+...........++|||+++| .+|.+++.. ..++.. .+.+++.+|.+||++ ||+||||||+|||++.++
T Consensus 110 ~~~~~~~~~~~~~lV~e~l~G~~~L~~~l~~---~~l~~~----~~~~i~~~l~~lH~~---GI~HrDlkp~NILv~~~~ 179 (239)
T PRK01723 110 ARVVRHGLFYRADILIERIEGARDLVALLQE---APLSEE----QWQAIGQLIARFHDA---GVYHADLNAHNILLDPDG 179 (239)
T ss_pred eeeeecCcceeeeEEEEecCCCCCHHHHHhc---CCCCHH----HHHHHHHHHHHHHHC---CCCCCCCCchhEEEcCCC
Confidence 654433222234699999997 689888743 234443 367899999999999 999999999999999999
Q ss_pred ceEEeeccCCcc
Q 035862 221 KPKLSDFGLARE 232 (393)
Q Consensus 221 ~~kl~Dfg~a~~ 232 (393)
.++|+|||.+..
T Consensus 180 ~v~LIDfg~~~~ 191 (239)
T PRK01723 180 KFWLIDFDRGEL 191 (239)
T ss_pred CEEEEECCCccc
Confidence 999999998865
No 433
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.68 E-value=3e-16 Score=134.01 Aligned_cols=135 Identities=21% Similarity=0.134 Sum_probs=92.5
Q ss_pred cceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCccc--HHH----------------------HHHHHHHhhcCC
Q 035862 77 MLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQG--HKQ----------------------WLAEVQFLGVVS 132 (393)
Q Consensus 77 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~----------------------~~~E~~~l~~l~ 132 (393)
.+.||+|+||+||+|.+. .+..||+|++....... ... ...|...+..+.
T Consensus 2 ~~~lg~G~~g~Vy~a~~~------~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~ 75 (187)
T cd05119 2 GGPIGTGKEADVYLALDG------DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLY 75 (187)
T ss_pred CcccccccceeEEEEECC------CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHH
Confidence 467999999999999854 23469999876532111 011 124555555554
Q ss_pred CCc--cceeeeeeecCCcccceEEEEEeecCCCChHHH-HhhcCCCCCCHHHHHHHHHHHHHHHHHhhc-CCCCCeEecc
Q 035862 133 HPN--LVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDR-LFSRAQPTLPWKTRLEIILGAAEGLAYLHE-GLEIQVIYRD 208 (393)
Q Consensus 133 h~n--iv~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~-l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~-~~~~~ivH~D 208 (393)
+.. +.+.++.. ..++||||+.++++... +.... .. ..+..++.+++.++.++|. . +++|+|
T Consensus 76 ~~~~~~~~~~~~~--------~~~lv~e~~~g~~~~~~~l~~~~---~~-~~~~~~~~~~~~~l~~lh~~~---~ivH~D 140 (187)
T cd05119 76 EAGVPVPKPIDLN--------RHVLVMEFIGGDGIPAPRLKDVR---LL-EDPEELYDQILELMRKLYREA---GLVHGD 140 (187)
T ss_pred HcCCCCCceEecC--------CCEEEEEEeCCCCccChhhhhhh---hc-ccHHHHHHHHHHHHHHHhhcc---CcCcCC
Confidence 332 33443321 23899999998543211 11100 11 5678899999999999999 7 999999
Q ss_pred CCCCCeEeCCCCceEEeeccCCccC
Q 035862 209 FKTSNVLLDGNFKPKLSDFGLAREG 233 (393)
Q Consensus 209 ikp~NIll~~~~~~kl~Dfg~a~~~ 233 (393)
|||+||+++ ++.++|+|||.+...
T Consensus 141 l~p~Nili~-~~~~~liDfg~a~~~ 164 (187)
T cd05119 141 LSEYNILVD-DGKVYIIDVPQAVEI 164 (187)
T ss_pred CChhhEEEE-CCcEEEEECcccccc
Confidence 999999999 899999999999654
No 434
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.68 E-value=7.2e-16 Score=126.49 Aligned_cols=135 Identities=19% Similarity=0.158 Sum_probs=108.8
Q ss_pred ccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcccHHHHHHHHHHhhcCCC--CccceeeeeeecCCcccceE
Q 035862 76 RMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSH--PNLVKLLGYCSTEDERGIQR 153 (393)
Q Consensus 76 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~~~~~~~~~~~~~~~~ 153 (393)
+.+.||.|.++.||++.... ..+++|....... ...+..|+.++..+.| .++.+++.++...+ ..
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~-------~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~----~~ 68 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKD-------EDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASGESDG----WS 68 (155)
T ss_pred cceecccccccceEEEEecC-------CeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCC----cc
Confidence 35679999999999998643 2489998866432 4567889999999976 58888888776553 44
Q ss_pred EEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCCcc
Q 035862 154 LLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLARE 232 (393)
Q Consensus 154 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~ 232 (393)
+++|||+.++.+..+ +......++.+++.++.++|.....+++|+|++|+||++++.+.++++|||.+..
T Consensus 69 ~~v~e~~~g~~~~~~---------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~ 138 (155)
T cd05120 69 YLLMEWIEGETLDEV---------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY 138 (155)
T ss_pred EEEEEecCCeecccC---------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence 999999988777643 4556678899999999999985334799999999999999999999999998864
No 435
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.58 E-value=9.8e-15 Score=138.22 Aligned_cols=253 Identities=23% Similarity=0.274 Sum_probs=182.4
Q ss_pred cCCcccceecc--cCCceEEEEEEcCCCCCCCceEEEEEEecCC--CcccHHHHHHHHHHhhcCC-CCccceeeeeeecC
Q 035862 72 NGFNRMLKIGE--GGFGSVYKGTIRPLDGRGEPLVVAVKKLNNH--GLQGHKQWLAEVQFLGVVS-HPNLVKLLGYCSTE 146 (393)
Q Consensus 72 ~~y~~~~~lg~--G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~ 146 (393)
..+.+...+|. |.+|.||.+... .......+|+|.-... .......-++|+.....++ |+|.++.+..+...
T Consensus 114 ~~~~~~~~~g~~~g~~~s~~~~~~~---~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~ 190 (524)
T KOG0601|consen 114 QRFPISSRTGSLPGSKGSVFKSRCT---NSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGS 190 (524)
T ss_pred hhcccccccccCCCCCceeecccCC---cccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccC
Confidence 45788889999 999999998752 1334456888874332 2233334456777777776 99999987777766
Q ss_pred CcccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHH----HHHHhhcCCCCCeEeccCCCCCeEeCCC-Cc
Q 035862 147 DERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAE----GLAYLHEGLEIQVIYRDFKTSNVLLDGN-FK 221 (393)
Q Consensus 147 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~----~l~~LH~~~~~~ivH~Dikp~NIll~~~-~~ 221 (393)
+ .+++-+|.+ +.+|..+..... ..++...++..+.+... |+.++|.. +++|-|+||.||+...+ ..
T Consensus 191 ~----~lfiqtE~~-~~sl~~~~~~~~-~~~p~~~l~~~~~~~~~~~~~al~~~hs~---~~~~~~~kp~~i~~~~~~~s 261 (524)
T KOG0601|consen 191 G----ILFIQTELC-GESLQSYCHTPC-NFLPDNLLWNSLRDWLSRDVTALSHLHSN---NIVHDDLKPANIFTTSDWTS 261 (524)
T ss_pred C----cceeeeccc-cchhHHhhhccc-ccCCchhhhhHHhhhhhcccccccccCCC---cccccccchhheecccccce
Confidence 6 458888998 568888774333 34788889999999999 99999999 99999999999999999 88
Q ss_pred eEEeeccCCccCCCCCCcc---ccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHH
Q 035862 222 PKLSDFGLAREGPTGDHTH---VSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLE 298 (393)
Q Consensus 222 ~kl~Dfg~a~~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~ 298 (393)
.+++|||+........... ......|...|++||+.+ .-++...|||++|.++.+..++..+......
T Consensus 262 ~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~-~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~-------- 332 (524)
T KOG0601|consen 262 CKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLN-GLATFASDIFSLGEVILEAILGSHLPSVGKN-------- 332 (524)
T ss_pred eecCCcceeEEccCCccccceeeeecCCCCceEeChhhhc-cccchHhhhcchhhhhHhhHhhcccccCCCC--------
Confidence 9999999988765544221 112236788999999775 5678899999999999999998776543200
Q ss_pred HHhhcCcCCcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 035862 299 WVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVES 354 (393)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~ 354 (393)
..+...-...++.++-...+.++...+..|++.+|..|++.+.+..+
T Consensus 333 ---------~~W~~~r~~~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l 379 (524)
T KOG0601|consen 333 ---------SSWSQLRQGYIPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTAL 379 (524)
T ss_pred ---------CCccccccccCchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhcc
Confidence 00000001112222222334566669999999999999998888775
No 436
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.55 E-value=4.4e-15 Score=130.20 Aligned_cols=208 Identities=20% Similarity=0.261 Sum_probs=141.5
Q ss_pred HhhcCCCCccceeeeeeecCCc-ccceEEEEEeecCCCChHHHHhh--cCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCC
Q 035862 127 FLGVVSHPNLVKLLGYCSTEDE-RGIQRLLVYEYMPNRSLEDRLFS--RAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQ 203 (393)
Q Consensus 127 ~l~~l~h~niv~~~~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ 203 (393)
-|-++-|.|||+++.++.+... ......++.||++.|+|..+|+. .....+......+|+.||+.||.|||+ +...
T Consensus 120 nllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs-~~Pp 198 (458)
T KOG1266|consen 120 NLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHS-CDPP 198 (458)
T ss_pred HHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhc-cCCc
Confidence 3445669999999998866543 23355889999999999999964 345567788888999999999999999 5679
Q ss_pred eEeccCCCCCeEeCCCCceEEeeccCCccCCCCCCcc--ccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhC
Q 035862 204 VIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTH--VSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTG 281 (393)
Q Consensus 204 ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg 281 (393)
|+|+++..+.|++..+|-+|+.--.-........... ......+.++|.+||.=.....+..+|||++|+...+|.-+
T Consensus 199 iihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemail 278 (458)
T KOG1266|consen 199 IIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAIL 278 (458)
T ss_pred cccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHHHh
Confidence 9999999999999999988875211111110000000 11123467889999976666777899999999999999887
Q ss_pred CCccCCCCchhh-hHHHHHHhhcCcCCcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 035862 282 RRVLERNRPTME-QKLLEWVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLK 356 (393)
Q Consensus 282 ~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~ 356 (393)
..--.......+ +..+. .....+.. ..-+.++.+|++..|..||++.+++-|+-
T Consensus 279 Eiq~tnseS~~~~ee~ia----------~~i~~len-----------~lqr~~i~kcl~~eP~~rp~ar~llfHpl 333 (458)
T KOG1266|consen 279 EIQSTNSESKVEVEENIA----------NVIIGLEN-----------GLQRGSITKCLEGEPNGRPDARLLLFHPL 333 (458)
T ss_pred eeccCCCcceeehhhhhh----------hheeeccC-----------ccccCcCcccccCCCCCCcchhhhhcCce
Confidence 643211111100 00000 00000000 11245899999999999999999998753
No 437
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.50 E-value=2.1e-13 Score=130.80 Aligned_cols=146 Identities=16% Similarity=0.097 Sum_probs=95.7
Q ss_pred cCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcccHH--------------------------------
Q 035862 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHK-------------------------------- 119 (393)
Q Consensus 72 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~-------------------------------- 119 (393)
..|. .+.||.|++|.||+|+... +..||||+..+.......
T Consensus 118 ~~fd-~~plasaSigQVh~A~l~~------G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~ 190 (437)
T TIGR01982 118 AEFE-EKPLAAASIAQVHRARLVD------GKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEF 190 (437)
T ss_pred hhCC-CcceeeeehhheEEEEecC------CCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHH
Confidence 3444 3579999999999999752 235999998654211000
Q ss_pred --------HHHHHHHHhhcC----CCCccceeeeeeecCCcccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHH
Q 035862 120 --------QWLAEVQFLGVV----SHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIIL 187 (393)
Q Consensus 120 --------~~~~E~~~l~~l----~h~niv~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ 187 (393)
.+.+|+..+..+ +|.+-+.+-.++..... ..++||||++|++|.++...... .. ....++.
T Consensus 191 ~~~l~~Eldf~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~---~~vLvmE~i~G~~L~~~~~~~~~-~~---~~~~ia~ 263 (437)
T TIGR01982 191 EKTLRRELDLRREAANASELGENFKNDPGVYVPEVYWDRTS---ERVLTMEWIDGIPLSDIAALDEA-GL---DRKALAE 263 (437)
T ss_pred HHHHHHHHCHHHHHHHHHHHHHhcCCCCCEEeCCEehhhcC---CceEEEEeECCcccccHHHHHhc-CC---CHHHHHH
Confidence 123344444443 23333343333322111 23899999999999887643211 12 2344566
Q ss_pred HHHH-HHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCCccCC
Q 035862 188 GAAE-GLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGP 234 (393)
Q Consensus 188 ql~~-~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~ 234 (393)
+++. .+..+|.. |++|+|++|+||+++++|.++++|||++....
T Consensus 264 ~~~~~~l~ql~~~---g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~ 308 (437)
T TIGR01982 264 NLARSFLNQVLRD---GFFHADLHPGNIFVLKDGKIIALDFGIVGRLS 308 (437)
T ss_pred HHHHHHHHHHHhC---CceeCCCCcccEEECCCCcEEEEeCCCeeECC
Confidence 6655 46788887 99999999999999999999999999987653
No 438
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.44 E-value=6.3e-13 Score=111.49 Aligned_cols=130 Identities=18% Similarity=0.117 Sum_probs=92.2
Q ss_pred ceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcccHHHHHHHHHHhhcCCCCccc-eeeeeeecCCcccceEEEE
Q 035862 78 LKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLV-KLLGYCSTEDERGIQRLLV 156 (393)
Q Consensus 78 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv-~~~~~~~~~~~~~~~~~lv 156 (393)
+.|+.|.++.||++... +..|++|....... ....+..|+.+++.+.+.+++ +++.+.... .++|
T Consensus 4 ~~l~~G~~~~vy~~~~~-------~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~~~~~------~~lv 69 (170)
T cd05151 4 SPLKGGMTNKNYRVEVA-------NKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYFDPET------GVLI 69 (170)
T ss_pred eecCCcccCceEEEEEC-------CeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEEeCCC------CeEE
Confidence 56899999999998753 23489998765432 123356788888888655544 454443211 2799
Q ss_pred EeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCC--CCCeEeccCCCCCeEeCCCCceEEeeccCCcc
Q 035862 157 YEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGL--EIQVIYRDFKTSNVLLDGNFKPKLSDFGLARE 232 (393)
Q Consensus 157 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~--~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~ 232 (393)
|||++|.++.+.- . ....++.+++.+|..||+.. +.+++|+|++|.||+++ ++.++++|||.+..
T Consensus 70 ~e~i~G~~l~~~~-------~---~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~ 136 (170)
T cd05151 70 TEFIEGSELLTED-------F---SDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGM 136 (170)
T ss_pred EEecCCCcccccc-------c---cCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccC
Confidence 9999998876420 1 11345678999999999871 12359999999999999 67899999998753
No 439
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.44 E-value=7.3e-13 Score=128.60 Aligned_cols=149 Identities=15% Similarity=0.084 Sum_probs=94.2
Q ss_pred HHHhcCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCccc------------------------------
Q 035862 68 REATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQG------------------------------ 117 (393)
Q Consensus 68 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~------------------------------ 117 (393)
.+.+..|.. ..||+|++|.||+|+...+ +..||||+..+.-...
T Consensus 116 ~~~F~~fd~-~PlasaSiaQVh~A~l~~~-----G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~ 189 (537)
T PRK04750 116 EEWFDDFDI-KPLASASIAQVHFARLKDN-----GREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREV 189 (537)
T ss_pred HHHHHhcCh-hhhcCCCccEEEEEEECCC-----CCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHH
Confidence 444567877 7899999999999998643 3459999997642110
Q ss_pred ----HHH------HHHHHHHhhcC----CCCccceeeeeeecCCcccceEEEEEeecCCCChHHHHhhcCCC----CCCH
Q 035862 118 ----HKQ------WLAEVQFLGVV----SHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQP----TLPW 179 (393)
Q Consensus 118 ----~~~------~~~E~~~l~~l----~h~niv~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~----~~~~ 179 (393)
.+. +.+|+..+.++ .+.+.+.+-.++.+-. ...++||||+.|++|.++-.-...+ .+..
T Consensus 190 v~e~~~~l~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~s---t~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~ 266 (537)
T PRK04750 190 VAEFEKTLHDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYC---SETVMVMERMYGIPVSDVAALRAAGTDMKLLAE 266 (537)
T ss_pred HHHHHHHHHHhhCHHHHHHHHHHHHHHccCCCCeecceeecccC---CCceEEEeeecCccHHhHHHHHhcCCCHHHHHH
Confidence 011 23344333333 2333344333332211 1338999999999998743211111 2333
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCC----ceEEeeccCCccCCC
Q 035862 180 KTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNF----KPKLSDFGLAREGPT 235 (393)
Q Consensus 180 ~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~----~~kl~Dfg~a~~~~~ 235 (393)
..+..++.|++ .. |++|+|+||+||+++.+| .++++|||++.....
T Consensus 267 ~~v~~~~~Qif-------~~---GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~ 316 (537)
T PRK04750 267 RGVEVFFTQVF-------RD---GFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNK 316 (537)
T ss_pred HHHHHHHHHHH-------hC---CeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCH
Confidence 33444444443 34 999999999999999988 999999999986644
No 440
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.40 E-value=3.2e-12 Score=122.61 Aligned_cols=163 Identities=18% Similarity=0.216 Sum_probs=121.2
Q ss_pred ceEEEEEEecCCCcccHHHHHHHHHHhhcCCCCccceeeeeeecCCcccceEEEEEeecCCCChHHHHhhcCCCCCCHHH
Q 035862 102 PLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKT 181 (393)
Q Consensus 102 ~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~ 181 (393)
+..|.+...............+-++.|+.++||||+++++.+..++ .+|+|+|-+ ..|..++... ....
T Consensus 37 ~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~----~~ylvTErV--~Pl~~~lk~l-----~~~~ 105 (690)
T KOG1243|consen 37 GGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEG----TLYLVTERV--RPLETVLKEL-----GKEE 105 (690)
T ss_pred CCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccC----ceEEEeecc--ccHHHHHHHh-----HHHH
Confidence 3346666666544333455677889999999999999999888777 569999998 5888888432 3566
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCCccCCCCCCccccccccccCCccCccccccCC
Q 035862 182 RLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIETGH 261 (393)
Q Consensus 182 ~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~ 261 (393)
+..-+.||+.||.|||.. ++++|++|.-+.|+|+..|..||++|.++........ ......--..|..|+.+....
T Consensus 106 v~~Gl~qIl~AL~FL~~d--~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~--~~~~~~~~~s~~~P~~~~~s~ 181 (690)
T KOG1243|consen 106 VCLGLFQILAALSFLNDD--CNLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNA--PAKSLYLIESFDDPEEIDPSE 181 (690)
T ss_pred HHHHHHHHHHHHHHHhcc--CCeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCc--ccccchhhhcccChhhcCccc
Confidence 777899999999999854 4999999999999999999999999998865433221 011112223456666443222
Q ss_pred CCchhhHHHHHHHHHHHHhC
Q 035862 262 LKSQSDIWSFGVVLYEILTG 281 (393)
Q Consensus 262 ~~~~~DiwslGvil~elltg 281 (393)
-..|.|-|||+++|++.|
T Consensus 182 --~s~D~~~Lg~li~el~ng 199 (690)
T KOG1243|consen 182 --WSIDSWGLGCLIEELFNG 199 (690)
T ss_pred --cchhhhhHHHHHHHHhCc
Confidence 357999999999999999
No 441
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.34 E-value=1.3e-12 Score=123.88 Aligned_cols=250 Identities=21% Similarity=0.197 Sum_probs=173.3
Q ss_pred HhcCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcccHHH--HHHHHHHhhcCC-CCccceeeeeeecC
Q 035862 70 ATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQ--WLAEVQFLGVVS-HPNLVKLLGYCSTE 146 (393)
Q Consensus 70 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~--~~~E~~~l~~l~-h~niv~~~~~~~~~ 146 (393)
...+|..+..||.|.|+.|+....+ ...+..|++|-+.+.-.....+ -+.|+.+...+. |.+++.++..+...
T Consensus 263 ~~~df~~v~~i~~~~~~~~~~~~~r----~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~ 338 (524)
T KOG0601|consen 263 KLTDFGLVSKISDGNFSSVFKVSKR----PEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQL 338 (524)
T ss_pred ecCCcceeEEccCCccccceeeeec----CCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCcccc
Confidence 3568999999999999999987743 1234468888776543222222 245666666665 77777766555444
Q ss_pred CcccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCC-CceEEe
Q 035862 147 DERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGN-FKPKLS 225 (393)
Q Consensus 147 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~-~~~kl~ 225 (393)
.. .++=-|||+++++...+ .....+.+...+.+..|++.++.++|+. .++|+|+||.||++..+ +..++.
T Consensus 339 r~----~~ip~e~~~~~s~~l~~--~~~~~~d~~~~~~~~~q~~~~l~~i~s~---~~~~~d~~psni~i~~~~~~~~~~ 409 (524)
T KOG0601|consen 339 RQ----GYIPLEFCEGGSSSLRS--VTSQMLDEDPRLRLTAQILTALNVIHSK---LFVHLDVKPSNILISNDGFFSKLG 409 (524)
T ss_pred cc----ccCchhhhcCcchhhhh--HHHHhcCcchhhhhHHHHHhccccccch---hhhcccccccceeeccchhhhhcc
Confidence 42 36788999999988665 3334567788899999999999999998 99999999999999886 778999
Q ss_pred eccCCccCCCCCCccccccccccCCcc--CccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhc
Q 035862 226 DFGLAREGPTGDHTHVSTAVVGTYGYA--APEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQF 303 (393)
Q Consensus 226 Dfg~a~~~~~~~~~~~~~~~~gt~~y~--aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~ 303 (393)
|||....+.... ....+..++. ++.......+..+.|++|||..+.+.+++...-+....
T Consensus 410 ~~~~~t~~~~~~-----~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~~------------- 471 (524)
T KOG0601|consen 410 DFGCWTRLAFSS-----GVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGVQ------------- 471 (524)
T ss_pred ccccccccceec-----ccccccccccccchhhccccccccccccccccccccccccCcccCccccc-------------
Confidence 999886432211 1122233344 55555667788899999999999999998754332211
Q ss_pred CcCCcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q 035862 304 PADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESLKLA 358 (393)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l~~~ 358 (393)
...+..... ...+ ....++..+.+.+...++..||.+.++..+....
T Consensus 472 ------~~~i~~~~~-p~~~-~~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~~~~ 518 (524)
T KOG0601|consen 472 ------SLTIRSGDT-PNLP-GLKLQLQVLLKVMINPDRKRRPSAVELSLHSEFY 518 (524)
T ss_pred ------ceeeecccc-cCCC-chHHhhhhhhhhhcCCccccchhhhhhcccchhh
Confidence 111111111 1111 2237788899999999999999999887776544
No 442
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.34 E-value=2e-11 Score=103.25 Aligned_cols=141 Identities=15% Similarity=0.083 Sum_probs=95.5
Q ss_pred ceecccCCceEEEEEEcCCC-CCCCceEEEEEEecCCCc----------------------ccHHHH----HHHHHHhhc
Q 035862 78 LKIGEGGFGSVYKGTIRPLD-GRGEPLVVAVKKLNNHGL----------------------QGHKQW----LAEVQFLGV 130 (393)
Q Consensus 78 ~~lg~G~~g~Vy~~~~~~~~-~~~~~~~vavK~~~~~~~----------------------~~~~~~----~~E~~~l~~ 130 (393)
..||.|--+.||.|...... ....+..+|+|+.+.... .....+ .+|++.|++
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 46899999999999743210 011345689997643210 001122 379999988
Q ss_pred CCC--CccceeeeeeecCCcccceEEEEEeecCCCChHH-HHhhcCCCCCCHHHHHHHHHHHHHHHHHh-hcCCCCCeEe
Q 035862 131 VSH--PNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLED-RLFSRAQPTLPWKTRLEIILGAAEGLAYL-HEGLEIQVIY 206 (393)
Q Consensus 131 l~h--~niv~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~-~l~~~~~~~~~~~~~~~i~~ql~~~l~~L-H~~~~~~ivH 206 (393)
+.. -++..++++ ... ++||||+.+..+.. .+. ...++......+..+++.+|..| |.. |+||
T Consensus 83 l~~~Gv~vP~pi~~--~~~------~lvME~Ig~~~~~~~~Lk---d~~~~~~~~~~i~~~i~~~l~~l~H~~---glVH 148 (197)
T cd05146 83 MQKAGIPCPEVVVL--KKH------VLVMSFIGDDQVPAPKLK---DAKLNDEEMKNAYYQVLSMMKQLYKEC---NLVH 148 (197)
T ss_pred HHHcCCCCCeEEEe--cCC------EEEEEEcCCCCccchhhh---ccccCHHHHHHHHHHHHHHHHHHHHhC---Ceec
Confidence 763 455566554 222 89999997643321 121 12345556677889999999998 887 9999
Q ss_pred ccCCCCCeEeCCCCceEEeeccCCccC
Q 035862 207 RDFKTSNVLLDGNFKPKLSDFGLAREG 233 (393)
Q Consensus 207 ~Dikp~NIll~~~~~~kl~Dfg~a~~~ 233 (393)
+||++.|||+. ++.+.|+|||.+...
T Consensus 149 GDLs~~NIL~~-~~~v~iIDF~qav~~ 174 (197)
T cd05146 149 ADLSEYNMLWH-DGKVWFIDVSQSVEP 174 (197)
T ss_pred CCCCHHHEEEE-CCcEEEEECCCceeC
Confidence 99999999997 578999999988653
No 443
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.31 E-value=4.5e-11 Score=97.30 Aligned_cols=144 Identities=19% Similarity=0.209 Sum_probs=101.6
Q ss_pred ccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCc--------ccHHHHHHHHHHhhcCCCCccceeeeeeecCC
Q 035862 76 RMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL--------QGHKQWLAEVQFLGVVSHPNLVKLLGYCSTED 147 (393)
Q Consensus 76 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 147 (393)
.+..+-+|+-+.|+++.+.. ..+.||.-..... -...+..+|++.|.++.--.|.-..-++.+..
T Consensus 11 ~l~likQGAEArv~~~~~~G-------e~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~ 83 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSFSG-------EAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTY 83 (229)
T ss_pred cceeeeccceeeEeeeccCC-------ceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecC
Confidence 56689999999999987642 2355554322211 12345678999999876433332222343333
Q ss_pred cccceEEEEEeecCC-CChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCc---eE
Q 035862 148 ERGIQRLLVYEYMPN-RSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFK---PK 223 (393)
Q Consensus 148 ~~~~~~~lv~e~~~~-~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~---~k 223 (393)
.. .++|||++| .++.+++...............++.+|-+.+.-||.+ +|+|+||..+||++..+|. +.
T Consensus 84 ~~----~i~ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~n---diiHGDLTTSNill~~~~~~~~~~ 156 (229)
T KOG3087|consen 84 GG----QIYMEFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDN---DIIHGDLTTSNILLRSDGNQITPI 156 (229)
T ss_pred CC----eEEEEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhC---CeecccccccceEEecCCCcCceE
Confidence 33 889999976 4788888765555444444578999999999999999 9999999999999976653 58
Q ss_pred EeeccCCccC
Q 035862 224 LSDFGLAREG 233 (393)
Q Consensus 224 l~Dfg~a~~~ 233 (393)
++|||++...
T Consensus 157 lIdfgls~~s 166 (229)
T KOG3087|consen 157 LIDFGLSSVS 166 (229)
T ss_pred EEeecchhcc
Confidence 9999998653
No 444
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=99.31 E-value=1.9e-10 Score=107.44 Aligned_cols=220 Identities=17% Similarity=0.234 Sum_probs=153.0
Q ss_pred CceEEEEEEcCCCCCCCceEEEEEEecCCCcccHHHHHHHHHHhhcCCCCccceeeeeeecCCcccceEEEEEeecCC-C
Q 035862 85 FGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPN-R 163 (393)
Q Consensus 85 ~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv~e~~~~-~ 163 (393)
-.+.|+++...++ ..|++|.+.............-+++++++.|+|+|++.+++........-+++|++|.++ +
T Consensus 289 ~~Ttyk~~s~~DG-----~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~ 363 (655)
T KOG3741|consen 289 SITTYKATSNVDG-----NAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSP 363 (655)
T ss_pred cceeEeeeeccCC-----ceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCc
Confidence 3678888854433 459999984433332222334578889999999999999998655555678999999876 6
Q ss_pred ChHHHHhhc-------------CCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCC
Q 035862 164 SLEDRLFSR-------------AQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLA 230 (393)
Q Consensus 164 ~L~~~l~~~-------------~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a 230 (393)
+|.++.+.. .+...++..+|.++.||..||.++|+. |+..+-|.|.+||++.+..++|+..|..
T Consensus 364 TL~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHss---GLAck~L~~~kIlv~G~~RIriS~C~i~ 440 (655)
T KOG3741|consen 364 TLYDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSS---GLACKTLDLKKILVTGKMRIRISGCGIM 440 (655)
T ss_pred hHHHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhc---CceeecccHhHeEeeCcceEEEecccce
Confidence 787766422 134578899999999999999999999 9999999999999999888999877766
Q ss_pred ccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCccCCCCchhhhHHHHHHhhcCcCCccc
Q 035862 231 REGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKF 310 (393)
Q Consensus 231 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (393)
....... . +-+ +--.+-|.=.||.+++.|.||..--...+...+..
T Consensus 441 Dvl~~d~--------------~--~~l---e~~Qq~D~~~lG~ll~aLAt~~~ns~~~d~~~~s~--------------- 486 (655)
T KOG3741|consen 441 DVLQEDP--------------T--EPL---ESQQQNDLRDLGLLLLALATGTENSNRTDSTQSSH--------------- 486 (655)
T ss_pred eeecCCC--------------C--cch---hHHhhhhHHHHHHHHHHHhhcccccccccchHHHH---------------
Confidence 5432221 0 111 11246799999999999999964211111100000
Q ss_pred ccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 035862 311 SMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESL 355 (393)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l 355 (393)
.......++.++++++.-....++++ -++.+++.++
T Consensus 487 --------~~~I~~~yS~D~rn~v~yl~s~~~~~-ksI~~llp~~ 522 (655)
T KOG3741|consen 487 --------LTRITTTYSTDLRNVVEYLESLNFRE-KSIQDLLPMI 522 (655)
T ss_pred --------HHHhhhhhhHHHHHHHHHHHhcCccc-ccHHHHHHHH
Confidence 01112246677888888888888876 6777777654
No 445
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.30 E-value=4.7e-11 Score=97.66 Aligned_cols=130 Identities=23% Similarity=0.303 Sum_probs=90.8
Q ss_pred eecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCc---c-----cHHHHHHHHHHhhcCCCCccceeeeeeecCCccc
Q 035862 79 KIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL---Q-----GHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERG 150 (393)
Q Consensus 79 ~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---~-----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 150 (393)
.+++|+-+.+|.+.+.+. .+.+|.--++.. . ...+..+|++++..+.--.|.-..-+..+.+..
T Consensus 3 ~i~~GAEa~i~~~~~~g~-------~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~- 74 (204)
T COG3642 3 LIKQGAEAIIYLTDFLGL-------PAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNG- 74 (204)
T ss_pred hhhCCcceeEEeeeccCc-------ceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCC-
Confidence 578999999999854321 145554322211 1 123456899999987643333222233344432
Q ss_pred ceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCC
Q 035862 151 IQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLA 230 (393)
Q Consensus 151 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a 230 (393)
.++|||++|..|.+.+... ...++..+-.-+.-||.+ ||+|+||.++||++..++ +.++|||++
T Consensus 75 ---~I~me~I~G~~lkd~l~~~---------~~~~~r~vG~~vg~lH~~---givHGDLTtsNiIl~~~~-i~~IDfGLg 138 (204)
T COG3642 75 ---LIVMEYIEGELLKDALEEA---------RPDLLREVGRLVGKLHKA---GIVHGDLTTSNIILSGGR-IYFIDFGLG 138 (204)
T ss_pred ---EEEEEEeCChhHHHHHHhc---------chHHHHHHHHHHHHHHhc---CeecCCCccceEEEeCCc-EEEEECCcc
Confidence 7999999999999888433 245677777888899999 999999999999998766 999999999
Q ss_pred cc
Q 035862 231 RE 232 (393)
Q Consensus 231 ~~ 232 (393)
..
T Consensus 139 ~~ 140 (204)
T COG3642 139 EF 140 (204)
T ss_pred cc
Confidence 75
No 446
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.26 E-value=1.9e-12 Score=129.33 Aligned_cols=248 Identities=22% Similarity=0.256 Sum_probs=164.7
Q ss_pred cCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCc---ccHHHHHHHHHHhhcCCCCccceeeeeeecCCc
Q 035862 72 NGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL---QGHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDE 148 (393)
Q Consensus 72 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 148 (393)
+++.+.+-+-+|.++.++.+.-...+ ...+.|+...... ...+....+-.++-...+|-++....-+.-..
T Consensus 804 d~~~i~~p~qS~sp~ss~p~~pa~sg-----h~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rs- 877 (1205)
T KOG0606|consen 804 DGFEITKPSQSGSPSSSFPASPAGSG-----HTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRS- 877 (1205)
T ss_pred ccceecccccCCCCcccccCCccccc-----cccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCC-
Confidence 45667777889999999887633222 2234443322111 11112222222222234565554433322222
Q ss_pred ccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeecc
Q 035862 149 RGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFG 228 (393)
Q Consensus 149 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg 228 (393)
.++++++|+.+++|...+++. +..+....+..+..+..++++||.. .+.|+|++|.|+++..+|..+++|||
T Consensus 878 ---P~~L~~~~~~~~~~~Skl~~~--~~~saepaRs~i~~~vqs~e~L~s~---~r~h~~~~p~~~l~~~~gh~~l~~~~ 949 (1205)
T KOG0606|consen 878 ---PLPLVGHYLNGGDLPSKLHNS--GCLSAEPARSPILERVQSLESLHSS---LRKHRDLKPDSLLIAYDGHRPLTDFG 949 (1205)
T ss_pred ---CcchhhHHhccCCchhhhhcC--CCcccccccchhHHHHhhhhccccc---hhhcccccccchhhcccCCcccCccc
Confidence 458999999999999988543 3456666677778889999999997 79999999999999999999999998
Q ss_pred CCccCCCC-----------------------------CCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHH
Q 035862 229 LAREGPTG-----------------------------DHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEIL 279 (393)
Q Consensus 229 ~a~~~~~~-----------------------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell 279 (393)
........ +.........||+.|.+||...+......+|+|++|++++|.+
T Consensus 950 t~~~vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l 1029 (1205)
T KOG0606|consen 950 TLSKVGLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVL 1029 (1205)
T ss_pred cccccccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhh
Confidence 43221100 0001123467999999999999999999999999999999999
Q ss_pred hCCCccCCCCchhhhHHHHHHhhcCcCCcccccccCcccc-cccCHHHHHHHHHHHHHhcccCCCCCCCHH
Q 035862 280 TGRRVLERNRPTMEQKLLEWVKQFPADGKKFSMMIDPRLR-NQYSINAARRVAKLADNCLKKNPEERPTMN 349 (393)
Q Consensus 280 tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ 349 (393)
+|.+||....+. +.+.. +...... ...+...+..+.+++...+..+|.+|..+.
T Consensus 1030 ~g~pp~na~tpq--~~f~n--------------i~~~~~~~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1030 TGIPPFNAETPQ--QIFEN--------------ILNRDIPWPEGPEEGSYEAQDLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred cCCCCCCCcchh--hhhhc--------------cccCCCCCCCCccccChhhhhhhhhhhccCchhccCcc
Confidence 999999765442 11111 1111110 112234567889999999999999998876
No 447
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=99.26 E-value=7.6e-10 Score=101.02 Aligned_cols=272 Identities=17% Similarity=0.184 Sum_probs=161.5
Q ss_pred ccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcccHHHHHHHHHHhhcCCCCccceeeeee---ecCCcccce
Q 035862 76 RMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLVKLLGYC---STEDERGIQ 152 (393)
Q Consensus 76 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~---~~~~~~~~~ 152 (393)
..+.||+|+-+.+|-.--. .+ .+-|+..........+...| +.+.-.||-+-.-+.|- ......+..
T Consensus 15 ~gr~LgqGgea~ly~l~e~--~d------~VAKIYh~Pppa~~aqk~a~--la~~p~~p~~~~rvaWPqa~L~G~~~~~~ 84 (637)
T COG4248 15 PGRPLGQGGEADLYTLGEV--RD------QVAKIYHAPPPAAQAQKVAE--LAATPDAPLLNYRVAWPQATLHGGRRGKV 84 (637)
T ss_pred CCccccCCccceeeecchh--hc------hhheeecCCCchHHHHHHHH--hccCCCCcchhhhhcccHHHhhCCCccce
Confidence 3456999999999964211 11 23355544433322222222 22223465433211111 111111222
Q ss_pred EEEEEeecCCC-ChHHHH----hhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeec
Q 035862 153 RLLVYEYMPNR-SLEDRL----FSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDF 227 (393)
Q Consensus 153 ~~lv~e~~~~~-~L~~~l----~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Df 227 (393)
.-++|..+.|. .+.+++ +.+..+...|...+..++.|+.+.+.||.. |.+-+|+.++|+|+++++.+.|.|-
T Consensus 85 iGflmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~---Gh~vGDVn~~~~lVsd~~~V~LVds 161 (637)
T COG4248 85 IGFLMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEH---GHVVGDVNQNSFLVSDDSKVVLVDS 161 (637)
T ss_pred eEEecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhc---CCcccccCccceeeecCceEEEEcc
Confidence 45677777664 222222 123445678999999999999999999998 9999999999999999999999975
Q ss_pred cCCccCCCCCCccccccccccCCccCccccc-----cCCCCchhhHHHHHHHHHHHHhC-CCccCCCCc------hhhhH
Q 035862 228 GLAREGPTGDHTHVSTAVVGTYGYAAPEYIE-----TGHLKSQSDIWSFGVVLYEILTG-RRVLERNRP------TMEQK 295 (393)
Q Consensus 228 g~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DiwslGvil~elltg-~~pf~~~~~------~~~~~ 295 (393)
..-... .+.......+|.+.|.+||... +..-+...|.|.||+++++++.| ++||.+-.. ..+..
T Consensus 162 Dsfqi~---~ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~ 238 (637)
T COG4248 162 DSFQIN---ANGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETD 238 (637)
T ss_pred cceeec---cCCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhh
Confidence 432221 1122334568999999999764 34567789999999999998887 999964211 11111
Q ss_pred HHHHHhhcCcCCcccccccCcccccccC-HHHHHHHHHHHHHhccc--CCCCCCCHHHHHHHHHHHHhhhcCCCC
Q 035862 296 LLEWVKQFPADGKKFSMMIDPRLRNQYS-INAARRVAKLADNCLKK--NPEERPTMNQVVESLKLAVQESEQGSS 367 (393)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~li~~~l~~--dp~~Rps~~~~l~~l~~~~~~~~~~~~ 367 (393)
+..-...+..+. ..-..+ -....+ ...++++..|..+|+.. ++.-|||++..+..|..+.+....=..
T Consensus 239 Ia~g~f~ya~~~---~~g~~p-~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~al~~~L~~C~v 309 (637)
T COG4248 239 IAHGRFAYASDQ---RRGLKP-PPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKAWVAALDALRQQLKKCTV 309 (637)
T ss_pred hhcceeeechhc---cCCCCC-CCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHHHHhhhhhhh
Confidence 111000000000 000000 011111 24567788888888864 367899999999888877765544333
No 448
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.19 E-value=3.7e-10 Score=98.91 Aligned_cols=145 Identities=21% Similarity=0.228 Sum_probs=104.3
Q ss_pred ceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCc-ccHHHHHHHHHHhhcCCC--CccceeeeeeecCCcccceEE
Q 035862 78 LKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL-QGHKQWLAEVQFLGVVSH--PNLVKLLGYCSTEDERGIQRL 154 (393)
Q Consensus 78 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h--~niv~~~~~~~~~~~~~~~~~ 154 (393)
+.|+.|..+.||++.... +..+++|....... .....+..|+++++.+.+ .++.+++.+....... ...+
T Consensus 4 ~~l~~G~~n~~~~v~~~~------g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~-~~~~ 76 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGG------GRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVL-GTPF 76 (223)
T ss_pred eecCCCccceEEEEEecC------CcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCcc-CCce
Confidence 468999999999987532 23488998765432 134567789999999875 3456677665543211 1238
Q ss_pred EEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcC-----------------------------------
Q 035862 155 LVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEG----------------------------------- 199 (393)
Q Consensus 155 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~----------------------------------- 199 (393)
+||||++|.++.+.+.. ..++......++.+++.+|..||+.
T Consensus 77 ~v~e~i~G~~l~~~~~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (223)
T cd05154 77 YVMERVDGRVLRDRLLR---PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDE 153 (223)
T ss_pred EEEEEeCCEecCCCCCC---CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccc
Confidence 99999999888765421 3466667777888888888888852
Q ss_pred ------------------CCCCeEeccCCCCCeEeCC--CCceEEeeccCCcc
Q 035862 200 ------------------LEIQVIYRDFKTSNVLLDG--NFKPKLSDFGLARE 232 (393)
Q Consensus 200 ------------------~~~~ivH~Dikp~NIll~~--~~~~kl~Dfg~a~~ 232 (393)
....++|+|++|+||+++. ++.+.|+||+.+..
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 154 PPAMERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred cHHHHHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 0246899999999999998 66789999998764
No 449
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=99.04 E-value=4.3e-09 Score=94.12 Aligned_cols=110 Identities=15% Similarity=0.083 Sum_probs=79.7
Q ss_pred HHHHHHHHhhcCCCCc--cceeeeeeecCCcc-cceEEEEEeecCCC-ChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHH
Q 035862 120 QWLAEVQFLGVVSHPN--LVKLLGYCSTEDER-GIQRLLVYEYMPNR-SLEDRLFSRAQPTLPWKTRLEIILGAAEGLAY 195 (393)
Q Consensus 120 ~~~~E~~~l~~l~h~n--iv~~~~~~~~~~~~-~~~~~lv~e~~~~~-~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~ 195 (393)
.+.+|...+..+..-+ ...++++....... ...-++|||++++. +|.+++........+......++.+++..+.-
T Consensus 74 ~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~s~LVte~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~ 153 (268)
T PRK15123 74 GADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRTSFIITEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRD 153 (268)
T ss_pred HHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccceeEEEEeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHH
Confidence 3668888887764322 23344444322111 12348999999885 89998743323445666778899999999999
Q ss_pred hhcCCCCCeEeccCCCCCeEeCC-------CCceEEeeccCCcc
Q 035862 196 LHEGLEIQVIYRDFKTSNVLLDG-------NFKPKLSDFGLARE 232 (393)
Q Consensus 196 LH~~~~~~ivH~Dikp~NIll~~-------~~~~kl~Dfg~a~~ 232 (393)
||.+ ||+|+|+++.|||++. ++.+.|+||+.+..
T Consensus 154 LH~~---Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~~~ 194 (268)
T PRK15123 154 MHAA---GINHRDCYICHFLLHLPFPGREEDLKLSVIDLHRAQI 194 (268)
T ss_pred HHHC---cCccCCCChhhEEEeccccCCCCCceEEEEECCcccc
Confidence 9999 9999999999999975 46799999998753
No 450
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=99.01 E-value=5.2e-09 Score=88.30 Aligned_cols=97 Identities=23% Similarity=0.286 Sum_probs=64.1
Q ss_pred HHHHHHHhhcCCCC--ccceeeeeeecCCcccceEEEEEeecC--CCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHH-
Q 035862 121 WLAEVQFLGVVSHP--NLVKLLGYCSTEDERGIQRLLVYEYMP--NRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAY- 195 (393)
Q Consensus 121 ~~~E~~~l~~l~h~--niv~~~~~~~~~~~~~~~~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~- 195 (393)
..+|.+.|..+..- ++.+++++. .. ++||||++ |..+..+. ... +.......++.+++..+..
T Consensus 55 ~~~E~~~L~~l~~~Gv~vP~p~~~~--~~------~ivME~I~~~G~~~~~l~-~~~---~~~~~~~~~~~~il~~~~~~ 122 (188)
T PF01163_consen 55 AKKEFRNLKRLYEAGVPVPKPYDYN--RN------VIVMEYIGEDGVPLPRLK-DVD---LSPEEPKELLEEILEEIIKM 122 (188)
T ss_dssp HHHHHHHHHHCCCTT-SS--EEEEE--TT------EEEEE--EETTEEGGCHH-HCG---GGGSTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCccCCcEEEEe--CC------EEEEEecCCCccchhhHH-hcc---ccchhHHHHHHHHHHHHHHH
Confidence 56799999999855 456665442 22 89999998 65554433 111 1134456677788885555
Q ss_pred hhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCCccC
Q 035862 196 LHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREG 233 (393)
Q Consensus 196 LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~ 233 (393)
+|.. |++|+|+.+.|||++++ .+.|+|||.+...
T Consensus 123 ~~~~---givHGDLs~~NIlv~~~-~~~iIDf~qav~~ 156 (188)
T PF01163_consen 123 LHKA---GIVHGDLSEYNILVDDG-KVYIIDFGQAVDS 156 (188)
T ss_dssp HHCT---TEEESS-STTSEEEETT-CEEE--GTTEEET
T ss_pred HHhc---CceecCCChhhEEeecc-eEEEEecCcceec
Confidence 5787 99999999999999987 8999999988653
No 451
>PRK09902 hypothetical protein; Provisional
Probab=98.99 E-value=1.2e-08 Score=86.58 Aligned_cols=143 Identities=17% Similarity=0.105 Sum_probs=103.5
Q ss_pred ecccCCceEEEEEEcCCCCCCCceEEEEEEecCCC------cccHHHHHHHHHHhhcCCCC--ccceeeeeeecCCcccc
Q 035862 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG------LQGHKQWLAEVQFLGVVSHP--NLVKLLGYCSTEDERGI 151 (393)
Q Consensus 80 lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~------~~~~~~~~~E~~~l~~l~h~--niv~~~~~~~~~~~~~~ 151 (393)
-|+||.+.|+.....+. .+-+|.....- +.....+.+|+..|..+..- .+.++............
T Consensus 26 ~~rgG~SgV~r~~~~g~-------~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pvf~~~~k~~~~~ 98 (216)
T PRK09902 26 YRRNGMSGVQCVERNGK-------KLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIVFGEAVKIEGEW 98 (216)
T ss_pred cCCCCcceEEEEEeCCc-------EEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccceeeeeccCCce
Confidence 56789999998764321 47888765211 22456788999999887632 24444422222233334
Q ss_pred eEEEEEeecCC-CChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCc--eEEeecc
Q 035862 152 QRLLVYEYMPN-RSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFK--PKLSDFG 228 (393)
Q Consensus 152 ~~~lv~e~~~~-~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~--~kl~Dfg 228 (393)
.-+||+|-+.| .+|.+++.+......+......++.+++.++.-||+. |+.|+|+.+.||+++.+|. ++++||.
T Consensus 99 rA~LVTe~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~---Gv~Hgdly~khIll~~~g~~~v~lIDlE 175 (216)
T PRK09902 99 RALLVTEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSV---NRQHGCCYVRHIYVKTEGKAEAGFLDLE 175 (216)
T ss_pred EEEEEEEeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHhheeecCCCCeeEEEEEhh
Confidence 56899998753 6899988554444567777889999999999999999 9999999999999987777 9999998
Q ss_pred CCcc
Q 035862 229 LARE 232 (393)
Q Consensus 229 ~a~~ 232 (393)
-++.
T Consensus 176 k~r~ 179 (216)
T PRK09902 176 KSRR 179 (216)
T ss_pred ccch
Confidence 7764
No 452
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.98 E-value=1.2e-08 Score=88.10 Aligned_cols=109 Identities=24% Similarity=0.257 Sum_probs=82.9
Q ss_pred HHHHHHHHHhhcCCCC--ccceeeeeeecCCcccceEEEEEeecCC-CChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHH
Q 035862 119 KQWLAEVQFLGVVSHP--NLVKLLGYCSTEDERGIQRLLVYEYMPN-RSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAY 195 (393)
Q Consensus 119 ~~~~~E~~~l~~l~h~--niv~~~~~~~~~~~~~~~~~lv~e~~~~-~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~ 195 (393)
....+|...+..+..- .+...+++..........-++|+|++++ .+|.+++..... .+......++.+++..+.-
T Consensus 56 ~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~--~~~~~~~~ll~~l~~~i~~ 133 (206)
T PF06293_consen 56 SRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQ--LDPSQRRELLRALARLIAK 133 (206)
T ss_pred hHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcc--cchhhHHHHHHHHHHHHHH
Confidence 4567788877776522 2445555555433333455899999988 489998854322 5566778999999999999
Q ss_pred hhcCCCCCeEeccCCCCCeEeCCCC---ceEEeeccCCcc
Q 035862 196 LHEGLEIQVIYRDFKTSNVLLDGNF---KPKLSDFGLARE 232 (393)
Q Consensus 196 LH~~~~~~ivH~Dikp~NIll~~~~---~~kl~Dfg~a~~ 232 (393)
||.+ ||+|+|+++.|||++.++ .+.++||+-++.
T Consensus 134 lH~~---gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~ 170 (206)
T PF06293_consen 134 LHDA---GIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRF 170 (206)
T ss_pred HHHC---cCCCCCCCcccEEEeCCCCceeEEEEcchhcee
Confidence 9999 999999999999999887 899999997764
No 453
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.97 E-value=1.3e-10 Score=112.19 Aligned_cols=150 Identities=21% Similarity=0.346 Sum_probs=107.6
Q ss_pred HHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCCccCCCCCCcc-------ccccccccCCccCccccccCC
Q 035862 189 AAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTH-------VSTAVVGTYGYAAPEYIETGH 261 (393)
Q Consensus 189 l~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~ 261 (393)
.+.|+.|+|+. .++||++|.|++|.++.+|..||+.|+++.......... ...-..-...|.|||++.+..
T Consensus 108 v~dgl~flh~s--Ak~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~~~ 185 (700)
T KOG2137|consen 108 VADGLAFLHRS--AKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLGTT 185 (700)
T ss_pred ccchhhhhccC--cceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhcccc
Confidence 33899999986 699999999999999999999999999886544321111 111223456899999999988
Q ss_pred CCchhhHHHHHHHHHHHH-hCCCccCCCCchhhhHHHHHHhhcCcCCcccccccCcccccccCHHHHHHHHHHHHHhccc
Q 035862 262 LKSQSDIWSFGVVLYEIL-TGRRVLERNRPTMEQKLLEWVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKK 340 (393)
Q Consensus 262 ~~~~~DiwslGvil~ell-tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~ 340 (393)
.+.++|+||+||++|.+. .|+..+..+.......... ..+..-...++.+++.++.+-+.+++..
T Consensus 186 ~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~~~~--------------~~~~~~~~~~s~~~p~el~~~l~k~l~~ 251 (700)
T KOG2137|consen 186 NTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYSFSR--------------NLLNAGAFGYSNNLPSELRESLKKLLNG 251 (700)
T ss_pred ccccccceeeeeEEEEEecCCcchhhccCCcchhhhhh--------------cccccccccccccCcHHHHHHHHHHhcC
Confidence 899999999999999999 5555554443222211111 1111112223356778999999999999
Q ss_pred CCCCCCCHHHHHHH
Q 035862 341 NPEERPTMNQVVES 354 (393)
Q Consensus 341 dp~~Rps~~~~l~~ 354 (393)
++.-||++..+...
T Consensus 252 ~~~~rp~~~~l~~~ 265 (700)
T KOG2137|consen 252 DSAVRPTLDLLLSI 265 (700)
T ss_pred CcccCcchhhhhcc
Confidence 99999987777654
No 454
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.89 E-value=1.4e-08 Score=88.34 Aligned_cols=134 Identities=19% Similarity=0.086 Sum_probs=92.1
Q ss_pred CcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCc----------------------ccHHHHHHHHHHhhcC
Q 035862 74 FNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL----------------------QGHKQWLAEVQFLGVV 131 (393)
Q Consensus 74 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~----------------------~~~~~~~~E~~~l~~l 131 (393)
+.+...||-|--+.||.|... .+..+++|.-+-... ..+..+.+|.++|..+
T Consensus 93 e~iG~~IGvGKEsdVY~~~~~------~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L 166 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAIDP------KGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRL 166 (304)
T ss_pred HhhccccccCccceEEEEECC------CCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHh
Confidence 566788999999999999854 233588885432110 1123457899999998
Q ss_pred CCC--ccceeeeeeecCCcccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccC
Q 035862 132 SHP--NLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDF 209 (393)
Q Consensus 132 ~h~--niv~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Di 209 (393)
.-. .+.+.+++- .-++|||+++|..|...- +.....-.++..|+.-+..+-.. |+||+|+
T Consensus 167 ~~~G~~VP~P~~~n--------RHaVvMe~ieG~eL~~~r-------~~~en~~~il~~il~~~~~~~~~---GiVHGDl 228 (304)
T COG0478 167 YPEGVKVPKPIAWN--------RHAVVMEYIEGVELYRLR-------LDVENPDEILDKILEEVRKAYRR---GIVHGDL 228 (304)
T ss_pred hhcCCCCCCccccc--------cceeeeehcccceeeccc-------CcccCHHHHHHHHHHHHHHHHHc---CccccCC
Confidence 744 666666542 228899999997765422 12233334444555545444455 9999999
Q ss_pred CCCCeEeCCCCceEEeeccCCc
Q 035862 210 KTSNVLLDGNFKPKLSDFGLAR 231 (393)
Q Consensus 210 kp~NIll~~~~~~kl~Dfg~a~ 231 (393)
++-||+++++|.+.++||--+.
T Consensus 229 SefNIlV~~dg~~~vIDwPQ~v 250 (304)
T COG0478 229 SEFNILVTEDGDIVVIDWPQAV 250 (304)
T ss_pred chheEEEecCCCEEEEeCcccc
Confidence 9999999999999999997554
No 455
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.69 E-value=1e-07 Score=92.44 Aligned_cols=152 Identities=16% Similarity=0.122 Sum_probs=92.7
Q ss_pred HHHhcCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcccH-----------------------------
Q 035862 68 REATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGH----------------------------- 118 (393)
Q Consensus 68 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~----------------------------- 118 (393)
++.+..|+. .-|+.++-|.||+|++.. +..||||+.++.-....
T Consensus 122 ee~F~eF~~-~PiAsASIaQVH~A~L~s------G~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~v 194 (517)
T COG0661 122 EELFSEFEP-EPIASASIAQVHRAVLKS------GEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEV 194 (517)
T ss_pred HHHHHHcCC-CchhhhhHhhheeEEecC------CCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHH
Confidence 334444543 569999999999999864 34599999876422100
Q ss_pred -----H------HHHHHHHHhhcC----CCCccceeeeeeecCCcccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHH
Q 035862 119 -----K------QWLAEVQFLGVV----SHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRL 183 (393)
Q Consensus 119 -----~------~~~~E~~~l~~l----~h~niv~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~ 183 (393)
+ .+.+|+..+.++ +...-+.+-.++.+-.. ..+++|||++|..+.+...-.. .+++...+.
T Consensus 195 v~e~~~~l~~ElDy~~EA~n~~~~~~nf~~~~~v~VP~V~we~t~---~~VLtmE~i~Gi~i~d~~~l~~-~g~d~k~ia 270 (517)
T COG0661 195 VDEFEKRLREELDYRREAANAERFRENFKDDPDVYVPKVYWEYTT---RRVLTMEWIDGIKISDIAALKS-AGIDRKELA 270 (517)
T ss_pred HHHHHHHHHHHhCHHHHHHHHHHHHHHcCCCCCeEeceeehhccC---CcEEEEEeeCCEecccHHHHHh-cCCCHHHHH
Confidence 0 123344444443 22222333333332111 2289999999999988753233 334433333
Q ss_pred HHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCCccCCC
Q 035862 184 EIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPT 235 (393)
Q Consensus 184 ~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~ 235 (393)
....++.--.-+ + . |++|.|.+|+||+++.+|.+.+.|||+......
T Consensus 271 ~~~~~~f~~q~~-~-d---gffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~~ 317 (517)
T COG0661 271 ELLVRAFLRQLL-R-D---GFFHADPHPGNILVRSDGRIVLLDFGIVGRLDP 317 (517)
T ss_pred HHHHHHHHHHHH-h-c---CccccCCCccceEEecCCcEEEEcCcceecCCH
Confidence 322222211111 2 3 999999999999999999999999999886544
No 456
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=98.65 E-value=5.1e-07 Score=77.05 Aligned_cols=140 Identities=13% Similarity=0.057 Sum_probs=86.9
Q ss_pred hcCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcccHHHH---------HHHHHHhhcCCC---Cccce
Q 035862 71 TNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQW---------LAEVQFLGVVSH---PNLVK 138 (393)
Q Consensus 71 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~---------~~E~~~l~~l~h---~niv~ 138 (393)
.++|...+.+-......|.+-.... ..+.+|..........+.+ .+.+..+..+.. -....
T Consensus 30 ~~~~~~~kv~k~~~r~~ValIei~~-------~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~ 102 (229)
T PF06176_consen 30 DNNYKIIKVFKNTKRNYVALIEIDG-------KKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPAD 102 (229)
T ss_pred hCCceEEEeecCCCccEEEEEEECC-------cEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCcccccc
Confidence 4678888888888877777655322 2488898876543222221 223333333321 22222
Q ss_pred eeeeeecCCc-ccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeC
Q 035862 139 LLGYCSTEDE-RGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLD 217 (393)
Q Consensus 139 ~~~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~ 217 (393)
++.+..-... .....+++|||++|..|.+.. .+++ .+...+..++.-||.. |++|+|..|+|++++
T Consensus 103 ~yl~~ekk~~~~~~~~~ll~EYIeG~~l~d~~------~i~e----~~~~ki~~~ikqlH~~---G~~HGD~hpgNFlv~ 169 (229)
T PF06176_consen 103 PYLAAEKKIFRYTSSYVLLMEYIEGVELNDIE------DIDE----DLAEKIVEAIKQLHKH---GFYHGDPHPGNFLVS 169 (229)
T ss_pred ceeeeeeeeccceeEEEEEEEEecCeecccch------hcCH----HHHHHHHHHHHHHHHc---CCccCCCCcCcEEEE
Confidence 2222211111 111236899999998887653 1232 2445677889999998 999999999999998
Q ss_pred CCCceEEeeccCCc
Q 035862 218 GNFKPKLSDFGLAR 231 (393)
Q Consensus 218 ~~~~~kl~Dfg~a~ 231 (393)
+++ ++++||+..+
T Consensus 170 ~~~-i~iID~~~k~ 182 (229)
T PF06176_consen 170 NNG-IRIIDTQGKR 182 (229)
T ss_pred CCc-EEEEECcccc
Confidence 655 9999998665
No 457
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=98.50 E-value=2e-06 Score=74.24 Aligned_cols=149 Identities=19% Similarity=0.188 Sum_probs=93.7
Q ss_pred HHHHHHHhcCCcccceecc---cCCceEEEEEEcCCCCCCCceEEEEEEecCCCccc-------------------HHH-
Q 035862 64 MQELREATNGFNRMLKIGE---GGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQG-------------------HKQ- 120 (393)
Q Consensus 64 ~~~~~~~~~~y~~~~~lg~---G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~-------------------~~~- 120 (393)
...+....++..+....|. |--+.||+|.. +....+|+|+........ .++
T Consensus 37 ~~~l~~L~~rg~i~~~~g~istGKEA~Vy~a~~------~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~l 110 (268)
T COG1718 37 LETLRRLLSRGVITELVGCISTGKEANVYLAET------GDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKL 110 (268)
T ss_pred HHHHHHHhcCCceeeeEeeecCCcceEEEeecc------CCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHH
Confidence 3445566666666666654 55567999863 234469999876432211 111
Q ss_pred ----HHHHHHHhhcCC--CCccceeeeeeecCCcccceEEEEEeecCCCCh-HHHHhhcCCCCCCHHHHHHHHHHHHHHH
Q 035862 121 ----WLAEVQFLGVVS--HPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSL-EDRLFSRAQPTLPWKTRLEIILGAAEGL 193 (393)
Q Consensus 121 ----~~~E~~~l~~l~--h~niv~~~~~~~~~~~~~~~~~lv~e~~~~~~L-~~~l~~~~~~~~~~~~~~~i~~ql~~~l 193 (393)
...|..-|+++. +-.+.+.+++. .-.|||||+....+ .-.| +..++.......+..+++..+
T Consensus 111 v~~W~~kEf~NL~R~~eAGVrvP~Pi~~~--------~nVLvMEfIg~~g~pAP~L---kDv~~e~~e~~~~~~~~v~~~ 179 (268)
T COG1718 111 VFAWARKEFRNLKRAYEAGVRVPEPIAFR--------NNVLVMEFIGDDGLPAPRL---KDVPLELEEAEGLYEDVVEYM 179 (268)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCCCceeec--------CCeEEEEeccCCCCCCCCc---ccCCcCchhHHHHHHHHHHHH
Confidence 245777777764 33334444432 12899999954311 0011 111223335667778888888
Q ss_pred HHhhc-CCCCCeEeccCCCCCeEeCCCCceEEeeccCCccC
Q 035862 194 AYLHE-GLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREG 233 (393)
Q Consensus 194 ~~LH~-~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~ 233 (393)
.-|-. . ++||+||+.-|||+. ++.+.++|||-|...
T Consensus 180 ~~l~~~a---~LVHgDLSEyNiL~~-~~~p~iID~~QaV~~ 216 (268)
T COG1718 180 RRLYKEA---GLVHGDLSEYNILVH-DGEPYIIDVSQAVTI 216 (268)
T ss_pred HHHHHhc---CcccccchhhheEEE-CCeEEEEECcccccc
Confidence 87776 5 999999999999999 889999999988653
No 458
>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C). Proteins in this uncharacterised family are described as transmembrane proteins.
Probab=98.50 E-value=4e-06 Score=71.03 Aligned_cols=102 Identities=26% Similarity=0.270 Sum_probs=80.3
Q ss_pred HHHHHhhcCCC-CccceeeeeeecCCcccceEEEEEeecCCCChHHHHhh-cCCCCCCHHHHHHHHHHHHHHHHHhhcCC
Q 035862 123 AEVQFLGVVSH-PNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFS-RAQPTLPWKTRLEIILGAAEGLAYLHEGL 200 (393)
Q Consensus 123 ~E~~~l~~l~h-~niv~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~i~~ql~~~l~~LH~~~ 200 (393)
.|.-+++.+++ +++.+++|.|- .++|.||...+++...-.. ..-...+|..+..++.+++..+.+|+...
T Consensus 8 ~E~lll~~l~~~~~~pk~lG~CG--------~~~v~E~~~~~~~~~~~~~l~~~~~~~w~~R~~iA~~lL~~l~~l~~~~ 79 (188)
T PF12260_consen 8 NEPLLLQLLQGSEPFPKLLGSCG--------RFYVVEYVGAGSLYGIYRPLSQFLQSPWEQRAKIALQLLELLEELDHGP 79 (188)
T ss_pred cHHHHHHHcCCCCCCCCeeeECC--------CEEEEEeecCccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCC
Confidence 57788888875 69999999982 1789999976655321000 11124689999999999999999999865
Q ss_pred CCCeEeccCCCCCeEeCCCCceEEeeccCCcc
Q 035862 201 EIQVIYRDFKTSNVLLDGNFKPKLSDFGLARE 232 (393)
Q Consensus 201 ~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~ 232 (393)
...+.-.|++|+|+-++++|++|++|...+..
T Consensus 80 ~~~~~lcDv~~~nfgv~~~~~lk~iDld~v~~ 111 (188)
T PF12260_consen 80 LGFFYLCDVSPDNFGVNDDGRLKLIDLDDVFV 111 (188)
T ss_pred CCcEEEeecchHHeEEeCCCcEEEEechhcch
Confidence 55688899999999999999999999987654
No 459
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=98.45 E-value=1.8e-06 Score=70.55 Aligned_cols=130 Identities=19% Similarity=0.189 Sum_probs=89.3
Q ss_pred cccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcccHHHHHHHHHHhhcCCCCccc-eeeeeeecCCcccceE
Q 035862 75 NRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNLV-KLLGYCSTEDERGIQR 153 (393)
Q Consensus 75 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv-~~~~~~~~~~~~~~~~ 153 (393)
+..+.||+|++|.||+|.++.. .+++|+-..++ .+..+..|+++|..++--++- +++.+ ..+
T Consensus 25 ~v~~~L~KG~~s~Vyl~~~~~~-------~~a~Kvrr~ds--~r~~l~kEakiLeil~g~~~~p~vy~y--g~~------ 87 (201)
T COG2112 25 RVEKELAKGTTSVVYLGEWRGG-------EVALKVRRRDS--PRRNLEKEAKILEILAGEGVTPEVYFY--GED------ 87 (201)
T ss_pred hhhhhhhcccccEEEEeeccCc-------eEEEEEecCCc--chhhHHHHHHHHHHhhhcCCCceEEEe--chh------
Confidence 4456799999999999987643 38888877653 456788899999998865554 33332 222
Q ss_pred EEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCC-CCCeEeCCCCceEEeeccCCcc
Q 035862 154 LLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFK-TSNVLLDGNFKPKLSDFGLARE 232 (393)
Q Consensus 154 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dik-p~NIll~~~~~~kl~Dfg~a~~ 232 (393)
++.|||+.|.+|.++.... +.. ....++++-.-|-.. ||-|+.|. |...+|..++.+.|+||..|..
T Consensus 88 ~i~me~i~G~~L~~~~~~~-----~rk----~l~~vlE~a~~LD~~---GI~H~El~~~~k~vlv~~~~~~iIDFd~At~ 155 (201)
T COG2112 88 FIRMEYIDGRPLGKLEIGG-----DRK----HLLRVLEKAYKLDRL---GIEHGELSRPWKNVLVNDRDVYIIDFDSATF 155 (201)
T ss_pred hhhhhhhcCcchhhhhhcc-----cHH----HHHHHHHHHHHHHHh---ccchhhhcCCceeEEecCCcEEEEEccchhh
Confidence 5679999998998765211 222 233355554445555 99999887 5555555566999999998874
Q ss_pred C
Q 035862 233 G 233 (393)
Q Consensus 233 ~ 233 (393)
.
T Consensus 156 k 156 (201)
T COG2112 156 K 156 (201)
T ss_pred c
Confidence 3
No 460
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=98.44 E-value=6.1e-06 Score=72.29 Aligned_cols=139 Identities=19% Similarity=0.162 Sum_probs=78.7
Q ss_pred ceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcccHHHHHHHHHHhhcCCCCc--cceeeeeeecCCcccceEEE
Q 035862 78 LKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPN--LVKLLGYCSTEDERGIQRLL 155 (393)
Q Consensus 78 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~~~~~~~~~~~~~~~~~l 155 (393)
..||.|..+.||+.. +. .+++|...... ......+|.++++.+..-. +.+.+++....+. ..+
T Consensus 7 ~~i~~G~t~~~y~~~----~~-----~~VlR~~~~~~--~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~----~gl 71 (226)
T TIGR02172 7 TQTGEGGNGESYTHK----TG-----KWMLKLYNPGF--DKETIKREFDASRKVFSLGIPTPHPFDLVEDGGR----LGL 71 (226)
T ss_pred eeecCCCCcceeEec----CC-----CEEEEeCCCCC--CHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCe----eee
Confidence 469999999999831 11 26777765432 2345678999998876333 3555655544442 367
Q ss_pred EEeecCCCC-hHHHH---------------------hhcCCCCCCHHHHHH-HHHH----------HHH-HHHHhhcC-C
Q 035862 156 VYEYMPNRS-LEDRL---------------------FSRAQPTLPWKTRLE-IILG----------AAE-GLAYLHEG-L 200 (393)
Q Consensus 156 v~e~~~~~~-L~~~l---------------------~~~~~~~~~~~~~~~-i~~q----------l~~-~l~~LH~~-~ 200 (393)
|||+++|.+ +...+ +.......+...... +..+ +.. ...+|... .
T Consensus 72 v~e~i~G~~~~~~~~~~~~~~~~~l~~~la~~l~~lH~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~ 151 (226)
T TIGR02172 72 IYELIVGKRSFSRIISDNPSRLEEIAKIFAEMAKKLHSTKCDTSTFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKEVPD 151 (226)
T ss_pred eeeecCCccchhhhhcCCHHHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhCCC
Confidence 999998864 21111 110001111111000 0000 000 11122111 1
Q ss_pred CCCeEeccCCCCCeEeCCCCceEEeeccCCcc
Q 035862 201 EIQVIYRDFKTSNVLLDGNFKPKLSDFGLARE 232 (393)
Q Consensus 201 ~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~ 232 (393)
...++|+|+.|.||++++++ +.++||+.+..
T Consensus 152 ~~~~~HgD~~~~Nii~~~~~-~~iIDwe~a~~ 182 (226)
T TIGR02172 152 TSTCLHGDFQIGNLITSGKG-TYWIDLGDFGY 182 (226)
T ss_pred CCceEecCCCCCcEEEcCCC-cEEEechhcCc
Confidence 23578999999999999988 99999997753
No 461
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=98.43 E-value=1.7e-06 Score=83.71 Aligned_cols=139 Identities=18% Similarity=0.090 Sum_probs=85.2
Q ss_pred ceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCccc-------------------------------HHH------
Q 035862 78 LKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQG-------------------------------HKQ------ 120 (393)
Q Consensus 78 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~-------------------------------~~~------ 120 (393)
+.||..+.|.||+|+.+. +..||||+-++.-... .+.
T Consensus 167 ~piaaASlaQVhrA~L~~------G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELD 240 (538)
T KOG1235|consen 167 EPIAAASLAQVHRARLKN------GEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELD 240 (538)
T ss_pred chhhhcchhheEEEEecC------CCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcc
Confidence 469999999999999875 3459999987642110 001
Q ss_pred HHHHHHHhhc----CCCCc------cceeeeeeecCCcccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHH
Q 035862 121 WLAEVQFLGV----VSHPN------LVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAA 190 (393)
Q Consensus 121 ~~~E~~~l~~----l~h~n------iv~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~ 190 (393)
|.+|++-..+ +.|-+ |.+++-.+.. ..+|+|||++|..+.|.-.-.+ ..++...+..-+.+..
T Consensus 241 F~~EA~Nae~~~~~f~~~~~~~~V~VP~Vy~~~st------~RVLtME~~~G~~i~Dl~~i~~-~gi~~~~i~~~l~~~~ 313 (538)
T KOG1235|consen 241 FTKEAKNAERFRENFKDFSLLTYVLVPKVYWDLST------KRVLTMEYVDGIKINDLDAIDK-RGISPHDILNKLVEAY 313 (538)
T ss_pred hHHHHHhHHHHHHHHHhcccccceeCCeehhhcCc------ceEEEEEecCCccCCCHHHHHH-cCCCHHHHHHHHHHHH
Confidence 2233332222 33444 3333322222 3389999999988876543222 2355444433333322
Q ss_pred HHHHHhhcCCCCCeEeccCCCCCeEeCC----CCceEEeeccCCccCC
Q 035862 191 EGLAYLHEGLEIQVIYRDFKTSNVLLDG----NFKPKLSDFGLAREGP 234 (393)
Q Consensus 191 ~~l~~LH~~~~~~ivH~Dikp~NIll~~----~~~~kl~Dfg~a~~~~ 234 (393)
.-+-+. .|++|+|=.|+||++.. ++.+.+.|||+.....
T Consensus 314 ~~qIf~-----~GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is 356 (538)
T KOG1235|consen 314 LEQIFK-----TGFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVIS 356 (538)
T ss_pred HHHHHh-----cCCccCCCCCCcEEEecCCCCCccEEEEccccccccc
Confidence 222222 29999999999999984 6789999999987643
No 462
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=98.42 E-value=1.5e-06 Score=76.60 Aligned_cols=145 Identities=19% Similarity=0.205 Sum_probs=81.4
Q ss_pred cceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcccHHHHHHHHHHhhcCCCC--ccceeeeeeecCCcccceEE
Q 035862 77 MLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHP--NLVKLLGYCSTEDERGIQRL 154 (393)
Q Consensus 77 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~--niv~~~~~~~~~~~~~~~~~ 154 (393)
++.|+.|..+.||+..... + .+++|..... .....+.+|..+++.+... .+..++.+....... ...+
T Consensus 2 i~~l~~G~~n~~~~v~~~~-~------~~vlK~~~~~--~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~-~~~~ 71 (239)
T PF01636_consen 2 IRPLSGGFSNRVYRVTTDD-G------RYVLKFYRPP--DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFN-GFPY 71 (239)
T ss_dssp EEEEEESSSSEEEEEEETT-S------EEEEEEESSH--HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEET-SEEE
T ss_pred CccCCCCCeeeEEEEEECC-c------EEEEEEeCCC--CCHHHHHHHHHHHHHHHhcCCCCceEEeeccccccc-ccce
Confidence 3578999999999988543 1 4889987654 3445667888888887532 355666544333222 2468
Q ss_pred EEEeecCCCChHH----------------HH---hhc--CCCCCCHHH---------HHHH------------HHHHHH-
Q 035862 155 LVYEYMPNRSLED----------------RL---FSR--AQPTLPWKT---------RLEI------------ILGAAE- 191 (393)
Q Consensus 155 lv~e~~~~~~L~~----------------~l---~~~--~~~~~~~~~---------~~~i------------~~ql~~- 191 (393)
++|++++|.++.. .+ +.. ......... .... ...+..
T Consensus 72 ~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (239)
T PF01636_consen 72 LLMEYIPGRPLDDELSPEQRPELLRQLGRALAQLHQVPPPFSPFADWPEWRLEFLRQLESWTARLRASELFDDLEELEER 151 (239)
T ss_dssp EEEEEESSEEHHHTSTHHHHHHHHHHHHHHHHHHHHSHTTCCCHTHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
T ss_pred EEEEEeccccccccccccccccccccchhhhhhcccccccccccccccccccccccccccccccccchhhhhhhHHHHHH
Confidence 9999999988777 11 111 111111100 0000 011111
Q ss_pred HHHHhhc----CCCCCeEeccCCCCCeEeC-CCCceEEeeccCCc
Q 035862 192 GLAYLHE----GLEIQVIYRDFKTSNVLLD-GNFKPKLSDFGLAR 231 (393)
Q Consensus 192 ~l~~LH~----~~~~~ivH~Dikp~NIll~-~~~~~kl~Dfg~a~ 231 (393)
.+..++. .....++|+|+.|.|||++ +++.+-|+||+.+.
T Consensus 152 ~~~~~~~~~~~~~~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~ 196 (239)
T PF01636_consen 152 LLQELEALLPKPLPPVLIHGDLHPGNILVDPSDGRIGIIDFEDAG 196 (239)
T ss_dssp HHHHHHHHHHCCSCEEEE-SS-SGGGEEEESSTTEEEE--GTT-E
T ss_pred HHHHHHhhhccCCCcEEEEeccccccceeeeccceeEEEecccce
Confidence 2233332 1234799999999999999 66767899998764
No 463
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=98.39 E-value=1.8e-08 Score=96.64 Aligned_cols=190 Identities=18% Similarity=0.139 Sum_probs=130.3
Q ss_pred HHhcCCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcccHHHHHHHHHHhhcCCCCc-cceeeeeeecCC
Q 035862 69 EATNGFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPN-LVKLLGYCSTED 147 (393)
Q Consensus 69 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n-iv~~~~~~~~~~ 147 (393)
+-+.-|....-+++|+++.+++.+...+. ....+.+... ....-++++|.+++||| .+..++-+..++
T Consensus 239 Dk~kws~~fh~fvK~altknpKkRptaek------lL~h~fvs~~-----l~~rl~~eLLdK~n~P~~~v~~~~d~~~E~ 307 (829)
T KOG0576|consen 239 DKTKWSEFFHNFVKGALTKNPKKRPTAEK------LLQHPFVSQT-----LSRRLAIELLDKVNNPNPVVRYLEDYDGED 307 (829)
T ss_pred CCccchHHHHHHHHHHhcCCCccCCChhh------heeceeeccc-----hhhHHHHHHHHHccCCCCcccccccCCccc
Confidence 33445556667899999999998743221 1224444332 23445889999999999 555554444444
Q ss_pred cccceEEEEEeecCCC-ChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEee
Q 035862 148 ERGIQRLLVYEYMPNR-SLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSD 226 (393)
Q Consensus 148 ~~~~~~~lv~e~~~~~-~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~D 226 (393)
+..++++++.++ +-...+ ......+...+...+.+.-.++++++|+. .=+|+| ||+.++ +..+..|
T Consensus 308 ----~~~i~~~i~s~~rs~~~~~-~~se~~~~~~~~~~~~r~et~~l~~l~~~---~~~~~d----~~l~s~-~~~~~~~ 374 (829)
T KOG0576|consen 308 ----YLWIPMRICSTGRSSALEM-TVSEIALEQYQFAYPLRKETRPLAELHSS---YKVHRD----NILGSE-EEVKLLD 374 (829)
T ss_pred ----ccchhhhhhcCCccccccC-ChhhHhhhhhhhhhhhhhhcccccccccc---cccCcc----cccccc-ccccccc
Confidence 668899999876 222111 11112233334455666677889999986 568888 777665 7789999
Q ss_pred ccCCccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCCCcc
Q 035862 227 FGLAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGRRVL 285 (393)
Q Consensus 227 fg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~~pf 285 (393)
|+....+.... ......+++.++|||+.....+....|.|++|+-..++--|-+|-
T Consensus 375 ~~v~~~L~~~~---~~~t~~~~~~~~~pev~~~~~~~~~p~~~~~~~~~~~~ap~~pPr 430 (829)
T KOG0576|consen 375 FAVPPQLTRTM---KPRTAIGTPEPLAPEVIQENTIDGCPDSGSLAVSAIQMAPGLPPR 430 (829)
T ss_pred ccCCcccCccc---ccccCCCCCCCCCchhhcccccccCCCccCCCcchhhcCCCCCCC
Confidence 99987765543 345678999999999999999999999999998777777777665
No 464
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=98.37 E-value=1.1e-06 Score=90.04 Aligned_cols=202 Identities=22% Similarity=0.292 Sum_probs=141.3
Q ss_pred HHHHHhhcCCCCccceeeeeeecCCcccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCC
Q 035862 123 AEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEI 202 (393)
Q Consensus 123 ~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~ 202 (393)
-|...+..+.|+|++.++.+.......+..+.+..+++...++...+ ..-..++..+.+.+..++.+||.|+|+.
T Consensus 231 ~e~~~l~k~~~~n~~~~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~--q~v~~i~~~~~r~~~~~~~~GL~~~h~~--- 305 (1351)
T KOG1035|consen 231 IELESLSKIAHDNLGGYFVYGLERLFRGIVLDVLQEICSKVELRSLL--QSVGSIPLETLRILHQKLLEGLAYLHSL--- 305 (1351)
T ss_pred HHHHHHHhhccccccceeEEeehhhcchHHHHHHHhhcCccchHHHH--hhccccCHHHHHHHHHHHhhhHHHHHHh---
Confidence 35666777889999999988876665543344557888888888877 4445688899999999999999999997
Q ss_pred CeEeccCCCC---CeEeCCCCceEEe--eccCCccCCCCCCccccccccccCCccCccccccCCCCch--hhHHHHHHHH
Q 035862 203 QVIYRDFKTS---NVLLDGNFKPKLS--DFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQ--SDIWSFGVVL 275 (393)
Q Consensus 203 ~ivH~Dikp~---NIll~~~~~~kl~--Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~--~DiwslGvil 275 (393)
...|.-+... +-..+..+.+.++ ||+.+......... .....+..+.++|......++.+ .|+|.+|...
T Consensus 306 ~l~~v~L~~s~~~~~~~~~e~~~~~sl~~~~ss~~l~d~~~~---~~~~~~~~~~~~e~~~~~~~~~~r~~dL~~lgll~ 382 (1351)
T KOG1035|consen 306 SLEHVVLSASSSKESTVDGEGVVAISLSDFDSSKPLPDNEKS---FSDLLAEIRNADEDLKENTAKKSRLTDLWCLGLLL 382 (1351)
T ss_pred ccceeEEecccccccccCccceeecchhhhcccccCCCcccc---hhhcCccccccccccccccchhhhhhHHHHHHHHH
Confidence 5555555544 4445566667766 88888765544322 23345566788887776665544 7999999999
Q ss_pred HHHHhCCCccCCCCchhhhHHHHHHhhcCcCCcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 035862 276 YEILTGRRVLERNRPTMEQKLLEWVKQFPADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVESL 355 (393)
Q Consensus 276 ~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~l 355 (393)
..+..|..+-..... . ..+++ ......+.++..+|+.-++++|+++.+++.+.
T Consensus 383 ~~~~~~~~i~~~~~~-----~--------------~~~l~--------~~~~~~~~d~~~~~~~~~~~~Rl~~~~ll~~~ 435 (1351)
T KOG1035|consen 383 LQLSQGEDISEKSAV-----P--------------VSLLD--------VLSTSELLDALPKCLDEDSEERLSALELLTHP 435 (1351)
T ss_pred hhhhhcCcccccccc-----h--------------hhhhc--------cccchhhhhhhhhhcchhhhhccchhhhhhch
Confidence 999988654321100 0 00000 00112577889999999999999999999997
Q ss_pred HHHH
Q 035862 356 KLAV 359 (393)
Q Consensus 356 ~~~~ 359 (393)
..-.
T Consensus 436 f~~~ 439 (1351)
T KOG1035|consen 436 FLRF 439 (1351)
T ss_pred hccc
Confidence 6543
No 465
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=98.32 E-value=1.1e-05 Score=71.76 Aligned_cols=138 Identities=17% Similarity=0.135 Sum_probs=78.5
Q ss_pred ecccCC-ceEEEEEEcCCCCCCCceEEEEEEecCCCcccHHHHHHHHHHhhcCC-CCccceeeeeeecCCcccceEEEEE
Q 035862 80 IGEGGF-GSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVS-HPNLVKLLGYCSTEDERGIQRLLVY 157 (393)
Q Consensus 80 lg~G~~-g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~~lv~ 157 (393)
|..|.. ..||+..... ..+.+|...... ...+.+|+++++.+. +--+.+++++....+ ..++||
T Consensus 6 ~~~g~~~~~v~~~~~~~-------~~~~vk~~~~~~---~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~----~~~lv~ 71 (244)
T cd05150 6 VTEGQSGATVYRLDGKN-------PGLYLKIAPSGP---TYELEREAERLRWLAGKLPVPEVIDYGSDDG----RAWLLT 71 (244)
T ss_pred cCCCCCcCeEEEEcCCC-------CcEEEEecCCCc---ccchHHHHHHHHHHHhcCCCCeEEEEEecCC----ccEEEE
Confidence 445555 7889876321 137778775432 234567888888775 333556666665443 238999
Q ss_pred eecCCCChHHHH-------------------hhcCCC--CCCHH--HHHHHHH--------------------HHHHHHH
Q 035862 158 EYMPNRSLEDRL-------------------FSRAQP--TLPWK--TRLEIIL--------------------GAAEGLA 194 (393)
Q Consensus 158 e~~~~~~L~~~l-------------------~~~~~~--~~~~~--~~~~i~~--------------------ql~~~l~ 194 (393)
|+++|.+|.... +..... .+... ....... .+...+.
T Consensus 72 e~i~G~~l~~~~~~~~~~~~~~~l~~~l~~lH~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (244)
T cd05150 72 SAVPGVPAAALWEELEPERLVDALAEALRRLHALPVADCPFDRRLDRRLAEARARVENGLVDEDDFDDERRGWSAEELYA 151 (244)
T ss_pred EeeCCccHhHhhcccCHHHHHHHHHHHHHHHhcCCcccCCcchhHHHHHHHHHHHHhcCCcChhhCcHhhcCCCHHHHHH
Confidence 999998776432 111000 11100 0000000 0111112
Q ss_pred HhhcC----CCCCeEeccCCCCCeEeCCCCceEEeeccCCc
Q 035862 195 YLHEG----LEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAR 231 (393)
Q Consensus 195 ~LH~~----~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~ 231 (393)
.|-.. ....++|+|+.|.|||+++++.+.|+||+.+.
T Consensus 152 ~l~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~iIDwe~a~ 192 (244)
T cd05150 152 ELEATRPAEEDLVVTHGDACLPNIIVDPGKFSGFIDLGRLG 192 (244)
T ss_pred HHHhhCCCcCceEEECCCCCCccEEEeCCcEEEEEEccccc
Confidence 22111 12369999999999999998878899999775
No 466
>PLN02876 acyl-CoA dehydrogenase
Probab=98.18 E-value=4.7e-05 Score=79.54 Aligned_cols=153 Identities=19% Similarity=0.255 Sum_probs=89.0
Q ss_pred cceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCC-cccHHHHHHHHHHhhcCC-CCcc--ceeeeeeecCCcccce
Q 035862 77 MLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG-LQGHKQWLAEVQFLGVVS-HPNL--VKLLGYCSTEDERGIQ 152 (393)
Q Consensus 77 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~-h~ni--v~~~~~~~~~~~~~~~ 152 (393)
+..++.|.+..+|+...... +....+++|+..... ......+.+|+++++.+. |+++ .+++.++.+....+ .
T Consensus 43 v~~l~gG~sn~ty~l~~~~~---~~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G-~ 118 (822)
T PLN02876 43 VSQFGHGQSNPTFLLEVGNG---GSVKRYVLRKKPPGKLLQSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIG-T 118 (822)
T ss_pred EEEeCCCCcCceEEEEECCC---CcceeEEEEeCCCCccCccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCC-C
Confidence 56789999999998765321 111236666654322 123346778999999986 6664 67777765542211 3
Q ss_pred EEEEEeecCCCChHH--------------------HH---hhcCCC--CC-----C----HHHHHHHHH-----------
Q 035862 153 RLLVYEYMPNRSLED--------------------RL---FSRAQP--TL-----P----WKTRLEIIL----------- 187 (393)
Q Consensus 153 ~~lv~e~~~~~~L~~--------------------~l---~~~~~~--~~-----~----~~~~~~i~~----------- 187 (393)
.|+||||++|..+.+ .+ +..... .+ + ..++..+..
T Consensus 119 ~flVME~v~G~~~~~~~~~~~~~~~r~~l~~~l~~~La~LH~vd~~~~gl~~~g~~~~~~~~~l~~w~~~~~~~~~~~~~ 198 (822)
T PLN02876 119 AFYIMEYLEGRIFVDPKLPGVAPERRRAIYRATAKVLAALHSADVDAIGLGKYGRRDNYCKRQVERWAKQYLASTGEGKP 198 (822)
T ss_pred ceEEEEecCCcccCCccCCCCCHHHHHHHHHHHHHHHHHHhCCCchhcChhhcCCCCchHHHHHHHHHHHHHHhhcccCC
Confidence 589999998865321 01 110000 00 0 112211111
Q ss_pred ----HHHHHHHHhhcCCC--------CCeEeccCCCCCeEeCCC-Cc-eEEeeccCCccC
Q 035862 188 ----GAAEGLAYLHEGLE--------IQVIYRDFKTSNVLLDGN-FK-PKLSDFGLAREG 233 (393)
Q Consensus 188 ----ql~~~l~~LH~~~~--------~~ivH~Dikp~NIll~~~-~~-~kl~Dfg~a~~~ 233 (393)
.+...+.+|..+.+ ..+||+|++++||+++.+ +. +-|.||+++...
T Consensus 199 ~~~~~~~~l~~wL~~~~P~~~~~~~~~~LvHGD~~~~Nvl~~~~~~~v~aVLDWE~a~~G 258 (822)
T PLN02876 199 PRNPKMLELIDWLRENIPAEDSTGAGTGIVHGDFRIDNLVFHPTEDRVIGILDWELSTLG 258 (822)
T ss_pred CCChhHHHHHHHHHhcCCCccccCCCcceEecCcccccEEEcCCCCeEEEEEeeeccccC
Confidence 12234556644322 359999999999999853 33 579999988753
No 467
>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].
Probab=98.11 E-value=0.0001 Score=62.80 Aligned_cols=128 Identities=20% Similarity=0.227 Sum_probs=84.3
Q ss_pred cceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCC----------------cccHHHHHHHHHHhhcCC------CC
Q 035862 77 MLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHG----------------LQGHKQWLAEVQFLGVVS------HP 134 (393)
Q Consensus 77 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~----------------~~~~~~~~~E~~~l~~l~------h~ 134 (393)
...||+|+.=.||.- ..+. -..||+..... ....++..+|+.....+. +.
T Consensus 6 ~~~i~~G~~R~cy~H--P~dp------~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~ 77 (199)
T PF10707_consen 6 SDLIAQGGERDCYQH--PDDP------NLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWS 77 (199)
T ss_pred CcccccCCCceEEEC--CCCC------CeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCccc
Confidence 457999999999862 2222 26888887655 122345566666555544 88
Q ss_pred ccceeeeeeecCCcccceEEEEEeecC------CCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecc
Q 035862 135 NLVKLLGYCSTEDERGIQRLLVYEYMP------NRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRD 208 (393)
Q Consensus 135 niv~~~~~~~~~~~~~~~~~lv~e~~~------~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~D 208 (393)
+|.+++|+..++-.. -+|+|.+. ..+|.+++.. ..++. ..... +-.-..||-++ .|+.+|
T Consensus 78 ~i~r~~G~veT~~G~----Glv~e~I~d~dG~~s~TL~~~l~~---~~~~~-~~~~~---L~~f~~~l~~~---~Iv~~d 143 (199)
T PF10707_consen 78 HIPRFYGFVETNLGL----GLVVELIRDADGNISPTLEDYLKE---GGLTE-ELRQA---LDEFKRYLLDH---HIVIRD 143 (199)
T ss_pred ccccEeEEEecCCce----EEEEEEEECCCCCcCccHHHHHHc---CCccH-HHHHH---HHHHHHHHHHc---CCeecC
Confidence 999999999888755 55666642 2478888832 23444 33333 33445566666 899999
Q ss_pred CCCCCeEeCCC--C--ceEEee
Q 035862 209 FKTSNVLLDGN--F--KPKLSD 226 (393)
Q Consensus 209 ikp~NIll~~~--~--~~kl~D 226 (393)
++|.||++... + .+.|+|
T Consensus 144 l~~~NIv~~~~~~~~~~lvlID 165 (199)
T PF10707_consen 144 LNPHNIVVQRRDSGEFRLVLID 165 (199)
T ss_pred CCcccEEEEecCCCceEEEEEe
Confidence 99999999533 2 477776
No 468
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=98.08 E-value=4.1e-05 Score=67.67 Aligned_cols=31 Identities=19% Similarity=0.197 Sum_probs=26.1
Q ss_pred CCeEeccCCCCCeEeCCCCceEEeeccCCcc
Q 035862 202 IQVIYRDFKTSNVLLDGNFKPKLSDFGLARE 232 (393)
Q Consensus 202 ~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~ 232 (393)
..++|+|+.++||++++++..-|+||+.+..
T Consensus 164 ~~l~HGD~~~~Nvlv~~~~i~giIDw~~a~~ 194 (235)
T cd05155 164 PVWFHGDLAPGNLLVQDGRLSAVIDFGCLGV 194 (235)
T ss_pred ceEEeCCCCCCcEEEECCCEEEEEeCcccCc
Confidence 4699999999999998766567999997753
No 469
>TIGR02721 ycfN_thiK thiamine kinase. Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.
Probab=97.91 E-value=9.5e-05 Score=66.25 Aligned_cols=137 Identities=16% Similarity=0.092 Sum_probs=73.9
Q ss_pred ecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcccHHHHHHHHHHhhcCCCCcc-ceeeeeeecCCcccceEEEEEe
Q 035862 80 IGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNL-VKLLGYCSTEDERGIQRLLVYE 158 (393)
Q Consensus 80 lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~~~~~~~~~~~~~~~~~lv~e 158 (393)
+..|-...+|+.... +..+++|..........-...+|..+++.+....+ .+++... .+ ++|||
T Consensus 4 ~~~G~tn~~y~~~~~-------~~~~vlR~~~~~~~~~~~~r~~E~~~l~~l~~~g~~P~~i~~~--~~------~~v~e 68 (256)
T TIGR02721 4 LSGGLTNRSWRIEHP-------GISFVWRPQSPVCKALGVDRQREYQILQALSALGLAPKPILVN--EH------WLLVE 68 (256)
T ss_pred CCCcCcCCeEEEEeC-------CccEEEeeCCcccccccCcHHHHHHHHHHHHhcCCCCceEEEe--CC------EEEEE
Confidence 556777889987521 12377787554322211124568888888864333 3333332 22 78999
Q ss_pred ecCCCChHHH--------------H---hhcC--CCCCCHH-HHHHHHHHH---------HHHHHHhhcC-----CCCCe
Q 035862 159 YMPNRSLEDR--------------L---FSRA--QPTLPWK-TRLEIILGA---------AEGLAYLHEG-----LEIQV 204 (393)
Q Consensus 159 ~~~~~~L~~~--------------l---~~~~--~~~~~~~-~~~~i~~ql---------~~~l~~LH~~-----~~~~i 204 (393)
|++|..+... + +... ...+... .+..+..++ ...+..+-.. .+..+
T Consensus 69 ~i~G~~~~~~~~~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 148 (256)
T TIGR02721 69 WLEGEVITLDQFVALDLLLELAALLHQLHSQPRFGYPLSLKARIAHYWLQIDPARRTPEWLRLYKQFRSAPEPAPLPLAP 148 (256)
T ss_pred eccCcccccccccCchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhcccccCChHHHHHHHHHHhccCCCCCCCee
Confidence 9998765421 1 1111 1111111 111111111 1111112111 12368
Q ss_pred EeccCCCCCeEeCCCCceEEeeccCCcc
Q 035862 205 IYRDFKTSNVLLDGNFKPKLSDFGLARE 232 (393)
Q Consensus 205 vH~Dikp~NIll~~~~~~kl~Dfg~a~~ 232 (393)
+|+|+.|.||++++++ +.|+||+.+..
T Consensus 149 ~H~Dl~~~Nil~~~~~-~~lIDwE~a~~ 175 (256)
T TIGR02721 149 LHMDVHAYNLVVTPQG-LKLIDWEYASD 175 (256)
T ss_pred ecCCCCcCcEEEeCCC-CEEEeccccCc
Confidence 9999999999999887 78999998764
No 470
>PRK09550 mtnK methylthioribose kinase; Reviewed
Probab=97.89 E-value=0.00024 Score=67.18 Aligned_cols=77 Identities=17% Similarity=0.116 Sum_probs=49.8
Q ss_pred cceecccCCceEEEEEEcCCCCCCCceEEEEEEecCC------C-cccHHHHHHHHHHhhcCC---CCccceeeeeeecC
Q 035862 77 MLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNH------G-LQGHKQWLAEVQFLGVVS---HPNLVKLLGYCSTE 146 (393)
Q Consensus 77 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~------~-~~~~~~~~~E~~~l~~l~---h~niv~~~~~~~~~ 146 (393)
.+.||.|.+..||++..... ...+.||.-.+. . .....+...|.+.|..+. -.++.+++.+..+.
T Consensus 31 ~~elggGn~N~VyrV~~~~g-----~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~D~~~ 105 (401)
T PRK09550 31 AREIGDGNLNLVFRVSDTEG-----GKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHYDEEL 105 (401)
T ss_pred eeEcCCCceEEEEEEEeCCC-----CeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEECCCC
Confidence 35799999999999986421 124888875421 1 123456667888888763 34567777663322
Q ss_pred CcccceEEEEEeecCCCC
Q 035862 147 DERGIQRLLVYEYMPNRS 164 (393)
Q Consensus 147 ~~~~~~~~lv~e~~~~~~ 164 (393)
.++||||+++..
T Consensus 106 ------~~lVME~L~~~~ 117 (401)
T PRK09550 106 ------AVTVMEDLSDHK 117 (401)
T ss_pred ------CEEEEecCCCcc
Confidence 289999997643
No 471
>PRK10593 hypothetical protein; Provisional
Probab=97.86 E-value=0.00039 Score=63.67 Aligned_cols=81 Identities=14% Similarity=0.094 Sum_probs=52.5
Q ss_pred cccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcccHHHHHHHHHHhhcCCC---CccceeeeeeecCCcccc
Q 035862 75 NRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSH---PNLVKLLGYCSTEDERGI 151 (393)
Q Consensus 75 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h---~niv~~~~~~~~~~~~~~ 151 (393)
...+.||.|..+.||.....+. .+.+|..+.. .....+..|...|+.+.. -.+.++++++......+
T Consensus 17 ~~~~~i~~G~~~~vy~~~~~~~-------~~~~k~~~~~--~~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g- 86 (297)
T PRK10593 17 SRVECISEQPYAALWALYDSQG-------NPMPLMARSF--STPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPG- 86 (297)
T ss_pred heeeecCCccceeEEEEEcCCC-------CEEEEEeccc--ccchHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCC-
Confidence 3455799999999999753211 1566664321 123467789998888753 35777887765432111
Q ss_pred eEEEEEeecCCCCh
Q 035862 152 QRLLVYEYMPNRSL 165 (393)
Q Consensus 152 ~~~lv~e~~~~~~L 165 (393)
..++|||+++|.++
T Consensus 87 ~~~LVmE~i~G~~~ 100 (297)
T PRK10593 87 PDVLLLERLRGVSV 100 (297)
T ss_pred CeEEEEeccCCEec
Confidence 34999999998765
No 472
>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2
Probab=97.83 E-value=0.00027 Score=59.88 Aligned_cols=129 Identities=24% Similarity=0.313 Sum_probs=86.4
Q ss_pred cCCcccceecccCC-ceEEEEEEcCCCCCCCceEEEEEEecC---CCc------------------ccHHHHHHHHHHhh
Q 035862 72 NGFNRMLKIGEGGF-GSVYKGTIRPLDGRGEPLVVAVKKLNN---HGL------------------QGHKQWLAEVQFLG 129 (393)
Q Consensus 72 ~~y~~~~~lg~G~~-g~Vy~~~~~~~~~~~~~~~vavK~~~~---~~~------------------~~~~~~~~E~~~l~ 129 (393)
..++.++.||.|.- |.||++..... .+|+|.... ... ....-|..|.+...
T Consensus 37 ~~I~flefLg~g~~~~~V~kv~I~g~-------~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfg 109 (207)
T PF13095_consen 37 DDIEFLEFLGHGSHDGYVFKVEIDGR-------IYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFG 109 (207)
T ss_pred CcEeeeeecCCCCceeEEEEEEECCe-------EEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhH
Confidence 57888999999999 99999986532 599999321 111 01122455666555
Q ss_pred cC---CCCcc--ceeeeeeecCC--------------cccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHH
Q 035862 130 VV---SHPNL--VKLLGYCSTED--------------ERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAA 190 (393)
Q Consensus 130 ~l---~h~ni--v~~~~~~~~~~--------------~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~ 190 (393)
++ .+.++ ++.+||..-.. .......||.||+.... .+. ..-+.++.
T Consensus 110 RLke~~~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~-----------~~~----~~~~~~~~ 174 (207)
T PF13095_consen 110 RLKEAGREGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP-----------PLQ----IRDIPQML 174 (207)
T ss_pred HHHhccccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc-----------ccc----hhHHHHHH
Confidence 54 45566 89999884441 11123356778775533 122 23456677
Q ss_pred HHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCC
Q 035862 191 EGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLA 230 (393)
Q Consensus 191 ~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a 230 (393)
+-+..+|.. ||+-+|+++.|.. + -+|+|||.+
T Consensus 175 ~dl~~~~k~---gI~~~Dv~~~ny~---~--G~lvDfs~~ 206 (207)
T PF13095_consen 175 RDLKILHKL---GIVPRDVKPRNYR---G--GKLVDFSSS 206 (207)
T ss_pred HHHHHHHHC---CeeeccCcccccc---C--CEEEecccC
Confidence 788899998 9999999999987 2 388999865
No 473
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=97.82 E-value=0.00032 Score=61.88 Aligned_cols=31 Identities=19% Similarity=0.263 Sum_probs=27.3
Q ss_pred CCeEeccCCCCCeEeCC-CCceEEeeccCCcc
Q 035862 202 IQVIYRDFKTSNVLLDG-NFKPKLSDFGLARE 232 (393)
Q Consensus 202 ~~ivH~Dikp~NIll~~-~~~~kl~Dfg~a~~ 232 (393)
..++|+|+.+.|||+++ ++.+.|+||..|..
T Consensus 170 ~~l~H~Dl~~~Nil~~~~~~~~~lIDwe~a~~ 201 (235)
T cd05157 170 IVFCHNDLLSGNIIYNEEKNSVKFIDYEYAGY 201 (235)
T ss_pred EEEEcCCCCcCcEEEeCCCCCEEEEEcccCCc
Confidence 47999999999999998 57899999987753
No 474
>cd05153 HomoserineK_II Homoserine Kinase, type II. Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.
Probab=97.73 E-value=0.00056 Score=62.68 Aligned_cols=146 Identities=20% Similarity=0.161 Sum_probs=78.8
Q ss_pred cceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcccHHHHHHHHHHhhcCCCCc--cceeeeeeecCC--cccce
Q 035862 77 MLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPN--LVKLLGYCSTED--ERGIQ 152 (393)
Q Consensus 77 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~~~~~~~~~~--~~~~~ 152 (393)
+..|..|....+|+..... . .+++|..... .......|+.++..+.+.+ +.+++....... .....
T Consensus 19 i~~i~~G~~n~~y~v~~~~--~-----~~vLr~~~~~---~~~~~~~e~~~l~~L~~~g~~vp~~i~~~~g~~~~~~~~~ 88 (296)
T cd05153 19 FEGISAGIENTNYFVTTDS--G-----RYVLTLFEKV---SAEELPFFLALLDHLAERGLPVPRPIADRDGEYLSELAGK 88 (296)
T ss_pred eecccCccccceEEEEeCC--C-----cEEEEEcCCC---ChHhccHHHHHHHHHHHCCCCCCccccCCCCcEeeeeCCc
Confidence 4567777778899875321 1 3788887642 2344556777777764322 334432110000 00113
Q ss_pred EEEEEeecCCCChHH----HH----------hhcC-C--C------CCCHHHH----------HHHHHHHHHHHHHhhc-
Q 035862 153 RLLVYEYMPNRSLED----RL----------FSRA-Q--P------TLPWKTR----------LEIILGAAEGLAYLHE- 198 (393)
Q Consensus 153 ~~lv~e~~~~~~L~~----~l----------~~~~-~--~------~~~~~~~----------~~i~~ql~~~l~~LH~- 198 (393)
.++|++|++|..+.. .+ +... . . ...+... ......+..++.++..
T Consensus 89 ~~~l~~~i~G~~~~~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~ 168 (296)
T cd05153 89 PAALVEFLAGEHLTRPTAAHCRQIGEALARLHLAAQSFPGERNNLRGLAWIRELGKDLLPLLSAEDRALLADELARQDAF 168 (296)
T ss_pred eEEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHhccCCccCCCcCCcHHHHHHHHHhccccCHHHHHHHHHHHHHHHhh
Confidence 478999999876532 01 1000 0 0 0011000 0011112333444442
Q ss_pred ---CCCCCeEeccCCCCCeEeCCCCceEEeeccCCcc
Q 035862 199 ---GLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLARE 232 (393)
Q Consensus 199 ---~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~ 232 (393)
..+.+++|+|+.|.||++++++.+.|+||+.+..
T Consensus 169 ~~~~~~~~l~HgD~~~~Nil~~~~~~~~iIDfe~a~~ 205 (296)
T cd05153 169 DPSDLPRGVIHADLFRDNVLFDGDELSGVIDFYFACT 205 (296)
T ss_pred hhhcCCCcCCccCcCcccEEEeCCceEEEeehhhhcC
Confidence 1235799999999999999987788999987753
No 475
>PRK05231 homoserine kinase; Provisional
Probab=97.62 E-value=0.0027 Score=58.82 Aligned_cols=32 Identities=31% Similarity=0.356 Sum_probs=27.1
Q ss_pred CCCeEeccCCCCCeEeCCCCceEEeeccCCcc
Q 035862 201 EIQVIYRDFKTSNVLLDGNFKPKLSDFGLARE 232 (393)
Q Consensus 201 ~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~ 232 (393)
+.+++|+|+.|+||+++++...-|+||+.+..
T Consensus 186 p~~liHgD~~~~Nil~~~~~~~~iIDf~~~~~ 217 (319)
T PRK05231 186 PRGVIHADLFRDNVLFEGDRLSGFIDFYFACN 217 (319)
T ss_pred CcccCCCCCCCCcEEEECCceEEEEecccccC
Confidence 45899999999999998666568999998753
No 476
>TIGR00938 thrB_alt homoserine kinase, Neisseria type. Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.
Probab=97.50 E-value=0.0043 Score=57.14 Aligned_cols=31 Identities=35% Similarity=0.379 Sum_probs=27.6
Q ss_pred CCCeEeccCCCCCeEeCCCCceEEeeccCCc
Q 035862 201 EIQVIYRDFKTSNVLLDGNFKPKLSDFGLAR 231 (393)
Q Consensus 201 ~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~ 231 (393)
+.+++|+|+.+.||++++++.+.|+||+.+.
T Consensus 186 ~~~l~HgD~~~~Nvl~~~~~~~~vIDfd~~~ 216 (307)
T TIGR00938 186 PRGVIHADLFPDNVLFDGDSVKGVIDFYFAC 216 (307)
T ss_pred CCccCCCCCCcCcEEEECCceEEEeeccccc
Confidence 4589999999999999988877899999774
No 477
>KOG1826 consensus Ras GTPase activating protein RasGAP/neurofibromin [Defense mechanisms]
Probab=97.45 E-value=3.5e-05 Score=81.42 Aligned_cols=159 Identities=13% Similarity=0.012 Sum_probs=112.3
Q ss_pred HHHHHhhcCCCCccceeeeeeecCCcccceEEEEEeecCCCChHHHHhhcCC--CCCCHHHHHHHHHHHHHHHHHhhcCC
Q 035862 123 AEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQ--PTLPWKTRLEIILGAAEGLAYLHEGL 200 (393)
Q Consensus 123 ~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~i~~ql~~~l~~LH~~~ 200 (393)
.|..-++...|+++...+.-..... ....+.+++|+.+|.+.+.|.+... ..+....+.....+.+.+..-+|+..
T Consensus 1278 ~e~de~~~~~h~~~~~~p~rI~ps~--s~ee~~r~~~~~~g~~f~iIikg~ee~~~ld~~~v~~~~kvsvl~~~~~ls~t 1355 (2724)
T KOG1826|consen 1278 SERDELREAKHYLTEVDPLRIPPSE--STEEYIRSLYVEFGKLFSIIIKGLEESPDLDRSPVHLRHKVSVLNRNVILSLT 1355 (2724)
T ss_pred hhhhhhhhhhceeeecccccCCCCC--ChHHHHHHHHHHHhHHHHHHHhccccCCcchhchHHHHHHHHHhccchhhhcc
Confidence 3444555567888776544332222 2244789999999999998865332 23333334333344366666666542
Q ss_pred CC--CeEeccCCCCCeEeCCCCceEEeeccCCccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHH
Q 035862 201 EI--QVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEI 278 (393)
Q Consensus 201 ~~--~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el 278 (393)
.. -.+|+++|+.|.+|..+..+|+.++|+.+.... .........+++.|+.|+....-.++.++|+|..|+-+|++
T Consensus 1356 nlg~T~v~~~Lkf~lpmIVtny~v~~gk~gLdKIknp--~~sf~Gl~l~sp~~v~qli~N~ik~t~rsdilr~s~~ly~r 1433 (2724)
T KOG1826|consen 1356 NLGNTNVSKSLKFTLPMIVTNYNVKLGKGGLDKIKNP--VLSFFGLELCSPIYVLQLIKNEIKFTKRSDILRRSLSLYLR 1433 (2724)
T ss_pred cCCccchhhhhhhhccceecCCcccccccccccccCc--hHhhhhhhhCCHHHHHHHHHHHHhhhhHHHHHHHHHHHHHH
Confidence 22 368999999999999999999999999983211 12234556788899999999888999999999999999999
Q ss_pred HhCCCcc
Q 035862 279 LTGRRVL 285 (393)
Q Consensus 279 ltg~~pf 285 (393)
.-|..+|
T Consensus 1434 s~~n~~f 1440 (2724)
T KOG1826|consen 1434 SDGNAYF 1440 (2724)
T ss_pred hcccHHH
Confidence 9988776
No 478
>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]
Probab=97.34 E-value=0.0006 Score=64.99 Aligned_cols=167 Identities=24% Similarity=0.360 Sum_probs=93.2
Q ss_pred HHHHHHHHHHhhcCCCCccceeeeeeecCCcccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhh
Q 035862 118 HKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLH 197 (393)
Q Consensus 118 ~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH 197 (393)
..+++-...+++.+.|+|...++++-..... ...+|||++ +.+|++.+..+... ... ++
T Consensus 26 s~~ilgr~~~lktl~~~~l~~yl~~~r~~~~---r~IVV~e~~-~~Sled~~~~~~l~---~~s-------------~~- 84 (725)
T KOG1093|consen 26 SIQILGRFQYLKSLQHDNLCQYLDFSRGKHE---RVIVVMEHY-TMSLEDILKTGNLK---DES-------------LL- 84 (725)
T ss_pred HHHHhhhhHHHHhhcCccceeeEeeecCccc---eEEEEehhh-ccchHHHHHhcccc---hhh-------------hc-
Confidence 3456667889999999999999987765554 357899999 66999988543311 100 00
Q ss_pred cCCCCCeEeccCCCCCeEeCCCCceEEeeccCCccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHH
Q 035862 198 EGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYE 277 (393)
Q Consensus 198 ~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~e 277 (393)
.+ ++.|- |+ ++.+| -++.. | |-. ..+|+||||+|.++.+
T Consensus 85 ~~---~~~~~-----~~-------~~~td-~~~t~------------------~--~~~-----~~pKsdVwsl~~i~~e 123 (725)
T KOG1093|consen 85 AH---GVLHL-----NI-------IYITD-HFLTK------------------Y--PSP-----IGPKSDVWSLGFIILE 123 (725)
T ss_pred cc---cccee-----hh-------hhccc-ccccc------------------C--CCC-----CCcchhhhhHHHHHHH
Confidence 11 44332 22 23333 11100 0 100 1149999999999999
Q ss_pred HHhCCCccCCCCchhhhHHHHHHhhcC-cCCcccccccCcccccccCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 035862 278 ILTGRRVLERNRPTMEQKLLEWVKQFP-ADGKKFSMMIDPRLRNQYSINAARRVAKLADNCLKKNPEERPTMNQVVE 353 (393)
Q Consensus 278 lltg~~pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~ 353 (393)
+..|...+........ ......+. .+.......... .....++..+.++..+|+-..|..||...++.+
T Consensus 124 l~L~~~l~~~~~~s~~---l~~i~k~~~~d~~~~~~a~e~----~~~~~~d~~~~~~~~~c~~~~~~ir~l~~~~~k 193 (725)
T KOG1093|consen 124 LYLGISLEAELTESEY---LEILLKYYTDDQELLSTAMEH----LIQLLADKKRLPLLKKCLWLEPIIRPLPMELSK 193 (725)
T ss_pred HHHhhHHHHHHHHHHH---HHHHHHhccCchhHHHHHHHH----HHHHhhhHhHHHHhccCCccccccccchhHHhc
Confidence 9999766543222111 11111111 111111100000 122245667778888888888888886655554
No 479
>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]
Probab=97.33 E-value=0.00019 Score=64.61 Aligned_cols=134 Identities=15% Similarity=0.063 Sum_probs=86.9
Q ss_pred CCcccceecccCCceEEEEEEcCCCCCCCceEEEEEEec--CCCc--------------------ccHHHHHHHHHHhhc
Q 035862 73 GFNRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLN--NHGL--------------------QGHKQWLAEVQFLGV 130 (393)
Q Consensus 73 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~--~~~~--------------------~~~~~~~~E~~~l~~ 130 (393)
-+.+++.||-|--+.+|.+.+. .+...++|.-+ ..+. -.+-...+|...|+.
T Consensus 93 v~svGnqIGVGKESDIY~v~d~------~G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa~kEfafmka 166 (465)
T KOG2268|consen 93 VESVGNQIGVGKESDIYVVADE------EGNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLAATKEFAFMKA 166 (465)
T ss_pred hhhhccccccccccceEEEecC------CCCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHHHHHHHHHHHH
Confidence 4778899999999999998753 22235655321 1100 011234568888877
Q ss_pred CC-CCc-cceeeeeeecCCcccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecc
Q 035862 131 VS-HPN-LVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRD 208 (393)
Q Consensus 131 l~-h~n-iv~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~D 208 (393)
+. |.. +.+.+++. .-++|||++.|-+|...-. . .. .-.+...+..-+--|..+ |+||+|
T Consensus 167 L~e~gfpVPkpiD~~--------RH~Vvmelv~g~Pl~~v~~-v----~d---~~~ly~~lm~~Iv~la~~---GlIHgD 227 (465)
T KOG2268|consen 167 LYERGFPVPKPIDHN--------RHCVVMELVDGYPLRQVRH-V----ED---PPTLYDDLMGLIVRLANH---GLIHGD 227 (465)
T ss_pred HHHcCCCCCCccccc--------ceeeHHHhhcccceeeeee-c----CC---hHHHHHHHHHHHHHHHHc---Cceecc
Confidence 75 322 33444332 2388999999988865321 1 11 223444455555667777 999999
Q ss_pred CCCCCeEeCCCCceEEeeccCCc
Q 035862 209 FKTSNVLLDGNFKPKLSDFGLAR 231 (393)
Q Consensus 209 ikp~NIll~~~~~~kl~Dfg~a~ 231 (393)
..-=||++++++.++++||--..
T Consensus 228 FNEFNimv~dd~~i~vIDFPQmv 250 (465)
T KOG2268|consen 228 FNEFNIMVKDDDKIVVIDFPQMV 250 (465)
T ss_pred cchheeEEecCCCEEEeechHhh
Confidence 99999999999999999996443
No 480
>PLN02756 S-methyl-5-thioribose kinase
Probab=97.26 E-value=0.0064 Score=57.51 Aligned_cols=74 Identities=14% Similarity=0.129 Sum_probs=47.7
Q ss_pred ccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCc-------ccHHHHHHHHHHhhcCC---CCccceeeeeeec
Q 035862 76 RMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGL-------QGHKQWLAEVQFLGVVS---HPNLVKLLGYCST 145 (393)
Q Consensus 76 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-------~~~~~~~~E~~~l~~l~---h~niv~~~~~~~~ 145 (393)
..+.||.|....||+.... + ..++||.-..... ....+...|+..|+.+. ..++.+++.++.+
T Consensus 36 ~~~eiggGn~N~VyrV~~~--~-----~svVVKqa~p~~r~vga~wpl~~~R~~~Ea~aL~~~~~~~p~~VPkVy~~ded 108 (418)
T PLN02756 36 KIKEVGDGNLNFVYIVVSS--S-----GSFVIKQALPYIRCIGESWPMTKERAYFEATALREHGRLCPDHVPEVYHFDRT 108 (418)
T ss_pred eEEEcCCCceeeEEEEEcC--C-----ccEEEEeCCccccCCCccccCCccHHHHHHHHHHHhhhcCCCCCCeEEEECCC
Confidence 3567899999999997742 1 1388887652110 12334445677776654 2477788887764
Q ss_pred CCcccceEEEEEeecCC
Q 035862 146 EDERGIQRLLVYEYMPN 162 (393)
Q Consensus 146 ~~~~~~~~~lv~e~~~~ 162 (393)
.. +++|||+++
T Consensus 109 ~~------vlvME~L~~ 119 (418)
T PLN02756 109 MA------LIGMRYLEP 119 (418)
T ss_pred CC------EEEEeecCC
Confidence 43 889999976
No 481
>TIGR01767 MTRK 5-methylthioribose kinase. This enzyme is involved in the methionine salvage pathway in certain bacteria.
Probab=97.18 E-value=0.0052 Score=57.04 Aligned_cols=31 Identities=16% Similarity=0.230 Sum_probs=26.1
Q ss_pred CCeEeccCCCCCeEeCCCCceEEeeccCCccC
Q 035862 202 IQVIYRDFKTSNVLLDGNFKPKLSDFGLAREG 233 (393)
Q Consensus 202 ~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~ 233 (393)
..++|||+.++||++++++ ++++||.++...
T Consensus 192 ~~llHGDl~~gNi~~~~~~-~~~iD~e~~~~G 222 (370)
T TIGR01767 192 ETLLHGDLHSGSIFVSEHE-TKVIDPEFAFYG 222 (370)
T ss_pred ceeeeccCCcccEEEcCCC-CEEEcCcccccC
Confidence 3789999999999998765 779999877653
No 482
>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]
Probab=97.18 E-value=0.0015 Score=59.88 Aligned_cols=113 Identities=17% Similarity=0.229 Sum_probs=76.0
Q ss_pred ccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeecc
Q 035862 149 RGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFG 228 (393)
Q Consensus 149 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg 228 (393)
.+.+.|++|++- |++|.- + ....+.++..++.+.+..++-+..+ ...-|||+.-+||||+ +|+|.|+||.
T Consensus 297 e~~y~yl~~kdh-gt~is~-i-----k~~~~~e~lsff~s~~sil~~lekk--f~fehrnlt~~niLId-~GnvtLIDfk 366 (488)
T COG5072 297 ETLYLYLHFKDH-GTPISI-I-----KADRSEEELSFFWSCISILDILEKK--FPFEHRNLTLDNILID-EGNVTLIDFK 366 (488)
T ss_pred CceEEEEEEecC-Cceeee-e-----ecccHHHHHHHHHHHHHHHhhhhhc--CCcccccccccceeee-cCceEEEEee
Confidence 344778888887 666642 1 2245778899999999988888876 5788999999999999 9999999999
Q ss_pred CCccCCCCCCccccccccccCCccCccccccCCCCchhhHHHHHHHHHHHHhCC
Q 035862 229 LAREGPTGDHTHVSTAVVGTYGYAAPEYIETGHLKSQSDIWSFGVVLYEILTGR 282 (393)
Q Consensus 229 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltg~ 282 (393)
+++....... +-....-.|-.+.|.. +..-|||-+ |--|+.|+
T Consensus 367 lsRl~~~q~~-------isy~rldhp~lF~G~d-d~QFeIYrl---Mr~l~~g~ 409 (488)
T COG5072 367 LSRLSYSQGI-------ISYNRLDHPDLFNGVD-DYQFEIYRL---MRRLLKGR 409 (488)
T ss_pred eeecccCCce-------eeccccCchhhhcCcc-ceeeeHHHH---HHHHhcCc
Confidence 9984322211 1111223344454333 666677764 34444443
No 483
>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes. The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer
Probab=97.17 E-value=0.0068 Score=55.65 Aligned_cols=33 Identities=27% Similarity=0.239 Sum_probs=28.5
Q ss_pred CCCCeEeccCCCCCeEeCCC----CceEEeeccCCcc
Q 035862 200 LEIQVIYRDFKTSNVLLDGN----FKPKLSDFGLARE 232 (393)
Q Consensus 200 ~~~~ivH~Dikp~NIll~~~----~~~kl~Dfg~a~~ 232 (393)
.+..++|+|+.|.|||++++ +.+.++||..+..
T Consensus 177 ~~~~lcH~Dl~~~Nil~~~~~~~~~~i~lIDwEya~~ 213 (302)
T cd05156 177 SPVVFCHNDLQEGNILLLNPSSETKKLVLIDFEYASY 213 (302)
T ss_pred CCceEEecCCCcCeEEecCCCCCCCcEEEEeeCCCCC
Confidence 34589999999999999985 8899999998753
No 484
>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported
Probab=97.13 E-value=0.0071 Score=54.74 Aligned_cols=30 Identities=20% Similarity=0.383 Sum_probs=25.4
Q ss_pred CeEeccCCCCCeEeCCCCc-eEEeeccCCcc
Q 035862 203 QVIYRDFKTSNVLLDGNFK-PKLSDFGLARE 232 (393)
Q Consensus 203 ~ivH~Dikp~NIll~~~~~-~kl~Dfg~a~~ 232 (393)
.++|+|++|+|||+++++. .-|+||+.+..
T Consensus 186 ~lvHGD~~~~Nilv~~~~~~~gviDWe~a~i 216 (276)
T cd05152 186 VLVHGDLHPGHILIDEDARVTGLIDWTEAKV 216 (276)
T ss_pred eeEeCCCCCCcEEEeCCCCEEEEECcHhccc
Confidence 5899999999999997565 46999998754
No 485
>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]
Probab=97.12 E-value=0.0077 Score=55.11 Aligned_cols=107 Identities=18% Similarity=0.186 Sum_probs=67.4
Q ss_pred HHHHHHHHHhhcCCC--CccceeeeeeecCCcccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHH-HHHHHHHHH
Q 035862 119 KQWLAEVQFLGVVSH--PNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEII-LGAAEGLAY 195 (393)
Q Consensus 119 ~~~~~E~~~l~~l~h--~niv~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~-~ql~~~l~~ 195 (393)
....+|+.+++.+.- --+...++.|.++. . ..++.||+|++|..+.+.+. +......++ ..++..|..
T Consensus 66 ~~~~re~~~i~~l~~~~vP~p~~~~~~~~~~-~-g~pf~v~~~veGe~~~~~~~-------~~~~~~~~~~~~l~~~La~ 136 (321)
T COG3173 66 HDEKREYRVIAALLDVDVPVPRAFGLCGEGY-L-GTPFYVMEWVEGEVVWSALP-------PESLGRQFALDALADFLAE 136 (321)
T ss_pred hHHHhHHHHHHHhcCCCCCCcccccccccCC-C-CCceEEEEEecceeccCcCC-------cccchHHHHHHHHHHHHHH
Confidence 444567777776642 23345556666555 1 24599999998854433221 111111222 255566666
Q ss_pred hhcC-------------------------------------------------------CCCCeEeccCCCCCeEeCCCC
Q 035862 196 LHEG-------------------------------------------------------LEIQVIYRDFKTSNVLLDGNF 220 (393)
Q Consensus 196 LH~~-------------------------------------------------------~~~~ivH~Dikp~NIll~~~~ 220 (393)
||+- ....++|+|+.+.|+++++++
T Consensus 137 LH~ida~~~~~~g~~~~~~~rql~~~~~~~~~~~~~~~~~~p~~~~~~~Wl~~~~p~~~~~~~lvHGD~~~gNlii~~~~ 216 (321)
T COG3173 137 LHSIDAAGLPDPGKPNAYRGRQLARWDDEYRRAKKELGGRIPLADRLIKWLEANRPPWAGPPVLVHGDYRPGNLIIDPGR 216 (321)
T ss_pred HhCCCCcCCCCCCccCccccchhhHHHHHHHHHHHhccCCCchHHHHHHHHHhcCCCcCCCceeeeCCcccCCEEEeCCC
Confidence 6642 125799999999999999998
Q ss_pred ceEEeeccCCccCC
Q 035862 221 KPKLSDFGLAREGP 234 (393)
Q Consensus 221 ~~kl~Dfg~a~~~~ 234 (393)
-+=+.||+++....
T Consensus 217 ~~gVlDwe~~~lGD 230 (321)
T COG3173 217 PTGVLDWELATLGD 230 (321)
T ss_pred eeEEEeccccccCC
Confidence 89999999987543
No 486
>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]
Probab=97.12 E-value=0.0035 Score=57.61 Aligned_cols=140 Identities=16% Similarity=0.099 Sum_probs=88.8
Q ss_pred ccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcc----------------------cHHH----HHHHHHHhh
Q 035862 76 RMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQ----------------------GHKQ----WLAEVQFLG 129 (393)
Q Consensus 76 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~----------------------~~~~----~~~E~~~l~ 129 (393)
+-..|..|--+.||.|.-. ++..+|||+.+.+-.. .++. +..|++-|.
T Consensus 148 inGCiSTGKEANVYHat~~------dG~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNLk 221 (520)
T KOG2270|consen 148 INGCISTGKEANVYHATEE------DGSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNLK 221 (520)
T ss_pred cccccccCccceeEeeecC------CCceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHHH
Confidence 3345777888899998733 2334899977542110 0111 245777788
Q ss_pred cCCCCccceeeeeeecCCcccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccC
Q 035862 130 VVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYLHEGLEIQVIYRDF 209 (393)
Q Consensus 130 ~l~h~niv~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~~~~ivH~Di 209 (393)
+++...|.-.--+..-.. +|||+|+.+.....= .-....++...+..+-.|++.-+.-|-+. +++||.||
T Consensus 222 Rl~~aGIP~PePIlLk~h------VLVM~FlGrdgw~aP--kLKd~~ls~~ka~~~Y~~~v~~MR~lY~~--c~LVHADL 291 (520)
T KOG2270|consen 222 RLNNAGIPCPEPILLKNH------VLVMEFLGRDGWAAP--KLKDASLSTSKARELYQQCVRIMRRLYQK--CRLVHADL 291 (520)
T ss_pred HHHhcCCCCCCceeeecc------eEeeeeccCCCCcCc--ccccccCChHHHHHHHHHHHHHHHHHHHH--hceeccch
Confidence 776544332211121111 799999954222110 01233466667788888888888888766 59999999
Q ss_pred CCCCeEeCCCCceEEeeccCCcc
Q 035862 210 KTSNVLLDGNFKPKLSDFGLARE 232 (393)
Q Consensus 210 kp~NIll~~~~~~kl~Dfg~a~~ 232 (393)
+--|+|+- +|.+.++|-+-+..
T Consensus 292 SEfN~Lyh-dG~lyiIDVSQSVE 313 (520)
T KOG2270|consen 292 SEFNLLYH-DGKLYIIDVSQSVE 313 (520)
T ss_pred hhhhheEE-CCEEEEEEcccccc
Confidence 99999986 57899999987764
No 487
>PLN02236 choline kinase
Probab=97.03 E-value=0.011 Score=55.26 Aligned_cols=146 Identities=17% Similarity=0.182 Sum_probs=79.5
Q ss_pred cceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcccHHHHHHHHHHhhcCCCCcc-ceeeeeeecCCcccceEEE
Q 035862 77 MLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVSHPNL-VKLLGYCSTEDERGIQRLL 155 (393)
Q Consensus 77 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~~~~~~~~~~~~~~~~~l 155 (393)
+..|..|-.-.+|++...... ......|++|........... ..+|..+++.+..-++ .++++.+. + ..
T Consensus 41 i~~l~gGlTN~~y~v~~~~~~-~~~~~~~v~Ri~g~~t~~~id-R~~E~~~~~~l~~~gl~P~~~~~~~--~------g~ 110 (344)
T PLN02236 41 VIPLKGAMTNEVFQIKWPTKE-GNLGRKVLVRIYGEGVELFFD-RDDEIRTFECMSRHGQGPRLLGRFP--N------GR 110 (344)
T ss_pred EEEcCCcccceeEEEEeCCCC-CCCCCeEEEEEccCCCCeeec-hHHHHHHHHHHHHcCCCCceEEEEC--C------ce
Confidence 344555777789987643211 122346888887654332222 2568888888763333 34555442 2 24
Q ss_pred EEeecCCCChHHH-----------------HhhcC--CC--CCCHHHHHHHHHHH-----------------HHHHHHh-
Q 035862 156 VYEYMPNRSLEDR-----------------LFSRA--QP--TLPWKTRLEIILGA-----------------AEGLAYL- 196 (393)
Q Consensus 156 v~e~~~~~~L~~~-----------------l~~~~--~~--~~~~~~~~~i~~ql-----------------~~~l~~L- 196 (393)
|++|+++.+|... ++... .. ...+..+..+..++ ...+..|
T Consensus 111 v~efi~g~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~L~ 190 (344)
T PLN02236 111 VEEFIHARTLSAADLRDPEISALIAAKLREFHSLDMPGPKNVLLWDRLRNWLKEAKNLCSPEEAKEFRLDSLEDEINLLE 190 (344)
T ss_pred EEEeeCCCCCCHHHcCChHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhhcCcchhhhcCHHHHHHHHHHHH
Confidence 7899887776421 01111 00 11122222222111 1111122
Q ss_pred ---hc-CCCCCeEeccCCCCCeEeCC-CCceEEeeccCCcc
Q 035862 197 ---HE-GLEIQVIYRDFKTSNVLLDG-NFKPKLSDFGLARE 232 (393)
Q Consensus 197 ---H~-~~~~~ivH~Dikp~NIll~~-~~~~kl~Dfg~a~~ 232 (393)
.. ..+..++|+|+++.|||+++ ++.+.++||..+..
T Consensus 191 ~~~~~~~~~~~~cH~Dl~~~Nil~~~~~~~~~lID~Eya~~ 231 (344)
T PLN02236 191 KELSGDDQEIGFCHNDLQYGNIMIDEETRAITIIDYEYASY 231 (344)
T ss_pred HHhcccCCCceEEeCCCCcCcEEEeCCCCcEEEEeehhccc
Confidence 11 12347899999999999986 47899999988753
No 488
>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []. Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.
Probab=96.92 E-value=0.007 Score=54.89 Aligned_cols=75 Identities=15% Similarity=0.252 Sum_probs=42.1
Q ss_pred cccceecccCCceEEEEEEcCCCCCCCceEEEEEEecCCCcccHHHHHHHHHHhhcCC---CCccceeeeeeecCCcccc
Q 035862 75 NRMLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNHGLQGHKQWLAEVQFLGVVS---HPNLVKLLGYCSTEDERGI 151 (393)
Q Consensus 75 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~~~~~~~~~~~~~~ 151 (393)
+..+.++.|....+|+... .+..+.+|.-... ....+..|+.-|+.+. --.+.+++++....+..
T Consensus 20 ~~~~~v~GG~i~~a~~~~~-------~~~~~FvK~~~~~---~~~~f~~Ea~gL~~L~~~~~~~vP~vi~~G~~~~~~-- 87 (288)
T PF03881_consen 20 TSIEPVSGGDINEAYRLDT-------DGGSYFVKVNSES---GRDMFEGEAEGLKALAEANPIRVPKVIAWGEYDDDA-- 87 (288)
T ss_dssp -EEEEE--SSSSEEEEEET-------TS-EEEEEEEEGG---GCCHHHHHHHHHHHHCHTTTSBS--EEEEEE-SSCC--
T ss_pred eeeEecCCCChhheEEEEC-------CCccEEEEecChh---hHHHHHHHHHHHHHHHhcCCCCCCeEEEEEeecCCc--
Confidence 4455688888899998761 2235888887632 2345666777666663 44577888877666543
Q ss_pred eEEEEEeecCCC
Q 035862 152 QRLLVYEYMPNR 163 (393)
Q Consensus 152 ~~~lv~e~~~~~ 163 (393)
+|||||++.+
T Consensus 88 --fLlle~l~~~ 97 (288)
T PF03881_consen 88 --FLLLEFLEMG 97 (288)
T ss_dssp --EEEEE-----
T ss_pred --eEEEEeecCC
Confidence 8999999765
No 489
>PRK12396 5-methylribose kinase; Reviewed
Probab=96.70 E-value=0.01 Score=55.85 Aligned_cols=75 Identities=19% Similarity=0.215 Sum_probs=46.5
Q ss_pred cceecccCCceEEEEEEcCCCCCCCceEEEEEEecCC---C---cccHHHHHHHHHHhhcCC--CC-ccceeeeeeecCC
Q 035862 77 MLKIGEGGFGSVYKGTIRPLDGRGEPLVVAVKKLNNH---G---LQGHKQWLAEVQFLGVVS--HP-NLVKLLGYCSTED 147 (393)
Q Consensus 77 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~---~---~~~~~~~~~E~~~l~~l~--h~-niv~~~~~~~~~~ 147 (393)
...||.|.-..||++.+.. .+..|.||.-.+. . .-...+..-|.++|+... -| ++.+++.+-.+.
T Consensus 34 ~~eigdGnlN~VfrV~~~~-----~~~svIVKQAlp~vRv~~swpL~~~R~~~E~~aL~~~~~~~P~~VP~vy~~D~e~- 107 (409)
T PRK12396 34 CKEIGDGNLNYVFRVWDEQ-----KNISVIVKQAGDTARISDEFKLSTNRIRIESDVLQLEEELAPGLVPKVYLFDSVM- 107 (409)
T ss_pred eeEcCCCceEEEEEEeeCC-----CCceEEEEeccHhhccCCCCCCChHHHHHHHHHHHHHHhhCCCcCCeEEEECcHH-
Confidence 4579999999999998631 1123888865321 1 223455666888888764 34 455565543222
Q ss_pred cccceEEEEEeecCC
Q 035862 148 ERGIQRLLVYEYMPN 162 (393)
Q Consensus 148 ~~~~~~~lv~e~~~~ 162 (393)
..+|||+++.
T Consensus 108 -----~~~vMEdL~~ 117 (409)
T PRK12396 108 -----NCCVMEDLSD 117 (409)
T ss_pred -----hhHHHHhCcc
Confidence 2789999854
No 490
>PLN02421 phosphotransferase, alcohol group as acceptor/kinase
Probab=96.27 E-value=0.045 Score=50.93 Aligned_cols=30 Identities=20% Similarity=0.217 Sum_probs=26.1
Q ss_pred CeEeccCCCCCeEeCC-CCceEEeeccCCcc
Q 035862 203 QVIYRDFKTSNVLLDG-NFKPKLSDFGLARE 232 (393)
Q Consensus 203 ~ivH~Dikp~NIll~~-~~~~kl~Dfg~a~~ 232 (393)
-++|+|+.+.|||+++ ++.++++||..|..
T Consensus 183 v~CHnDl~~~NiL~~~~~~~l~lID~EYag~ 213 (330)
T PLN02421 183 VFAHNDLLSGNLMLNEDEGKLYFIDFEYGSY 213 (330)
T ss_pred EEEECCCCcccEEEeCCCCcEEEEcccccCC
Confidence 4799999999999975 57899999998864
No 491
>PTZ00384 choline kinase; Provisional
Probab=95.96 E-value=0.13 Score=48.73 Aligned_cols=30 Identities=20% Similarity=0.082 Sum_probs=24.8
Q ss_pred CCeEeccCCCCCeEeCCCCceEEeeccCCcc
Q 035862 202 IQVIYRDFKTSNVLLDGNFKPKLSDFGLARE 232 (393)
Q Consensus 202 ~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~ 232 (393)
...+|.|+-+.||+.++ +.+.++||..|..
T Consensus 227 ~VfCHNDL~~gNIL~~~-~~l~lID~EYA~~ 256 (383)
T PTZ00384 227 VLFCHNDLFFTNILDFN-QGIYFIDFDFAGF 256 (383)
T ss_pred eeeeeccCCcccEEecC-CCEEEEEeccccC
Confidence 47899999999999765 4599999987753
No 492
>PF07387 Seadorna_VP7: Seadornavirus VP7; InterPro: IPR009973 This family consists of several Seadornavirus specific VP7 proteins of around 305 residues in length. The function of this family is unknown.
Probab=95.80 E-value=0.064 Score=46.08 Aligned_cols=102 Identities=13% Similarity=0.107 Sum_probs=65.3
Q ss_pred EEEEEecCCCcc-cHHHHHHHHHHhhcCCCCccceeeeeeecCCcccceEEEEEeecCCCChHHHHhhcCCCCCCHHHHH
Q 035862 105 VAVKKLNNHGLQ-GHKQWLAEVQFLGVVSHPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLEDRLFSRAQPTLPWKTRL 183 (393)
Q Consensus 105 vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~ 183 (393)
..+|++...... ....+..+.+++.++. .|+++.. + .+...-+|.|+|..... .+ .
T Consensus 88 L~lKKi~slp~~~~~~~y~nky~v~Armh--GilrL~N---D---n~~~yGvIlE~Cy~~~i-----------~~----~ 144 (308)
T PF07387_consen 88 LFLKKIRSLPCCINDALYFNKYRVFARMH--GILRLKN---D---NNYKYGVILERCYKIKI-----------NF----S 144 (308)
T ss_pred hhhhhccCCCcccchhhhhhhhhHHHHhh--heeEeec---C---CCceeEEEEeeccCccc-----------ch----h
Confidence 556666544333 3445677888887765 4566652 1 22234678898843111 11 1
Q ss_pred HHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCC
Q 035862 184 EIILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLA 230 (393)
Q Consensus 184 ~i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a 230 (393)
.++..=+.+|...|+. ..+.+|||-.|+||+-+..|.+||.|-+..
T Consensus 145 N~i~agi~~L~~fH~~-~~~~lHGD~np~NiM~D~~G~lKlVDP~~L 190 (308)
T PF07387_consen 145 NFITAGIKDLMDFHSE-NQHCLHGDCNPDNIMCDKFGYLKLVDPVCL 190 (308)
T ss_pred HHHHHhHHHHHHhhcc-CCCeecCCCChhheeecCCCCEEecChhhh
Confidence 1222224567788864 358999999999999999999999998754
No 493
>KOG1236 consensus Predicted unusual protein kinase [General function prediction only]
Probab=95.55 E-value=0.064 Score=50.28 Aligned_cols=60 Identities=18% Similarity=0.125 Sum_probs=40.0
Q ss_pred EEEEeecCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHh-hcCCCCCeEeccCCCCCeEeCCC
Q 035862 154 LLVYEYMPNRSLEDRLFSRAQPTLPWKTRLEIILGAAEGLAYL-HEGLEIQVIYRDFKTSNVLLDGN 219 (393)
Q Consensus 154 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ql~~~l~~L-H~~~~~~ivH~Dikp~NIll~~~ 219 (393)
.++-+|..|.++..++... ..++.....++.--+.|+--+ --. +.+|.|+.|+||++--+
T Consensus 321 vl~E~~~~Gl~v~~~v~~~---~~pe~l~kkva~lg~~AllkMl~vD---NFvHaDlHPGNVlirf~ 381 (565)
T KOG1236|consen 321 VLVETYERGLSVLRFVKWK---SQPEALVKKVAKLGVNALLKMLIVD---NFVHADLHPGNVLIRFN 381 (565)
T ss_pred eeeeeccccccHHhhhhcc---cChHHHHHHHHHHHHHHHHHHHHhh---cceecccCCCcEEEEec
Confidence 6677888888998888433 345555555555445554432 222 89999999999999533
No 494
>PRK06148 hypothetical protein; Provisional
Probab=95.33 E-value=0.21 Score=53.65 Aligned_cols=33 Identities=39% Similarity=0.459 Sum_probs=27.5
Q ss_pred CCCCeEeccCCCCCeEeCCCC--ceE-EeeccCCcc
Q 035862 200 LEIQVIYRDFKTSNVLLDGNF--KPK-LSDFGLARE 232 (393)
Q Consensus 200 ~~~~ivH~Dikp~NIll~~~~--~~k-l~Dfg~a~~ 232 (393)
.+.++||+|+.+.|||++.++ .+. |+|||-+..
T Consensus 201 Lp~~vIHgDln~~NiLv~~~~~~~isGiIDFgDa~~ 236 (1013)
T PRK06148 201 LPAQVIHNDANDYNILVDADDGERISGLIDFGDAVH 236 (1013)
T ss_pred CCcceECCCCCcccEEEcCCCCcceEEEEECccccc
Confidence 355899999999999999875 555 999998764
No 495
>PRK10271 thiK thiamine kinase; Provisional
Probab=94.98 E-value=0.022 Score=47.85 Aligned_cols=30 Identities=17% Similarity=0.252 Sum_probs=26.4
Q ss_pred CCeEeccCCCCCeEeCCCCceEEeeccCCcc
Q 035862 202 IQVIYRDFKTSNVLLDGNFKPKLSDFGLARE 232 (393)
Q Consensus 202 ~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~ 232 (393)
.-.+|+|+.|+|++++++| ++|+||+.+..
T Consensus 77 ~~p~H~D~~~~N~~~~~~~-~~lIDwe~a~~ 106 (188)
T PRK10271 77 LAPLHMDVHAGNLVHSASG-LRLIDWEYAGD 106 (188)
T ss_pred eeeecCCCCCccEEEECCC-EEEEeCCcccC
Confidence 3579999999999998888 99999998864
No 496
>COG0510 ycfN Thiamine kinase and related kinases [Coenzyme transport and metabolism]
Probab=94.95 E-value=0.058 Score=48.53 Aligned_cols=47 Identities=17% Similarity=0.132 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHhhcCCCCCeEeccCCCCCeEeCCCCceEEeeccCCcc
Q 035862 185 IILGAAEGLAYLHEGLEIQVIYRDFKTSNVLLDGNFKPKLSDFGLARE 232 (393)
Q Consensus 185 i~~ql~~~l~~LH~~~~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~ 232 (393)
.+..+-.++.-.+.. ..-++|+|+.|+|++.++.+.++|+||..|..
T Consensus 137 ~~~~l~~~l~~~~~~-~~v~cH~Dl~~~N~l~t~~~~l~LIDWEyAg~ 183 (269)
T COG0510 137 KLKELRRALEEVPKD-DLVPCHNDLNPGNLLLTDKGGLFLIDWEYAGL 183 (269)
T ss_pred HHHHHHHHhhhcCCC-ceeeecCCCCccceEEcCCCcEEEEecccCCC
Confidence 333444444444431 02489999999999999999999999998864
No 497
>COG3001 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=94.75 E-value=0.7 Score=40.17 Aligned_cols=56 Identities=23% Similarity=0.321 Sum_probs=35.5
Q ss_pred EEEEEEecCCCcccHHHHHHHHHHhhcCC---CCccceeeeeeecCCcccceEEEEEeecCCCChH
Q 035862 104 VVAVKKLNNHGLQGHKQWLAEVQFLGVVS---HPNLVKLLGYCSTEDERGIQRLLVYEYMPNRSLE 166 (393)
Q Consensus 104 ~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~~~~~~~~~~~~~~~~~lv~e~~~~~~L~ 166 (393)
.+.+|+-... ....|..|+.-|..+. .-.+.+++.+-...+ +.|+||||++-+.+.
T Consensus 41 ~~FvK~n~~~---~~~~f~AEa~gL~~la~s~ti~VP~vi~~G~~~~----~sylVle~L~~~~~d 99 (286)
T COG3001 41 PFFVKCNQRE---QLSMFTAEADGLELLARSNTITVPKVIAVGASRD----HSYLVLEYLPTGPLD 99 (286)
T ss_pred ceEEEecchh---hHHHHHHHHHHHHHHHhcCCccccceEEecCCCC----eeEEEEeeccCCCCC
Confidence 4888875443 2345666766666554 344556665555444 559999999887665
No 498
>TIGR02906 spore_CotS spore coat protein, CotS family. Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.
Probab=94.42 E-value=0.087 Score=48.51 Aligned_cols=29 Identities=21% Similarity=0.277 Sum_probs=25.6
Q ss_pred CCeEeccCCCCCeEeCCCCceEEeeccCCc
Q 035862 202 IQVIYRDFKTSNVLLDGNFKPKLSDFGLAR 231 (393)
Q Consensus 202 ~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~ 231 (393)
.+++|+|+.+.||+++. +.+.|+||+.+.
T Consensus 187 ~~liHgD~~~~Nil~~~-~~i~lIDfd~~~ 215 (313)
T TIGR02906 187 RGFCHQDYAYHNILLKD-NEVYVIDFDYCT 215 (313)
T ss_pred CceEcCCCCcccEEEeC-CcEEEEECcccc
Confidence 48999999999999987 678999998664
No 499
>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]
Probab=93.99 E-value=0.13 Score=47.59 Aligned_cols=29 Identities=31% Similarity=0.418 Sum_probs=25.9
Q ss_pred eEeccCCCCCeEeCCCCc-eEEeeccCCcc
Q 035862 204 VIYRDFKTSNVLLDGNFK-PKLSDFGLARE 232 (393)
Q Consensus 204 ivH~Dikp~NIll~~~~~-~kl~Dfg~a~~ 232 (393)
+||+|+.|+||+++.+.. +-++||+-+..
T Consensus 199 iIH~D~~~~NVl~d~~~~~~g~iDFdDa~~ 228 (331)
T COG2334 199 IIHGDLHPDNVLFDDDTDVSGFIDFDDAGY 228 (331)
T ss_pred eeecCCCccceeEcCCCCeeeEEEcccccc
Confidence 999999999999999885 89999997753
No 500
>PTZ00296 choline kinase; Provisional
Probab=93.94 E-value=1.1 Score=43.45 Aligned_cols=30 Identities=20% Similarity=0.297 Sum_probs=25.2
Q ss_pred CCeEeccCCCCCeEeCCCCceEEeeccCCcc
Q 035862 202 IQVIYRDFKTSNVLLDGNFKPKLSDFGLARE 232 (393)
Q Consensus 202 ~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~ 232 (393)
..++|.|+-+.|||.++++ ++|+||..|..
T Consensus 284 ~VfCHNDl~~~NiL~~~~~-l~LIDfEYAg~ 313 (442)
T PTZ00296 284 IVFCHNDLQENNIINTNKC-LRLIDFEYSGY 313 (442)
T ss_pred eeEEeCCCCccceeecCCC-EEEEeeccccc
Confidence 4689999999999987555 99999987753
Done!