Query 035863
Match_columns 146
No_of_seqs 166 out of 1061
Neff 5.4
Searched_HMMs 29240
Date Mon Mar 25 11:48:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/035863.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/035863hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hbf_A Flavonoid 3-O-glucosylt 99.2 5.7E-12 2E-16 109.5 4.9 70 2-79 384-453 (454)
2 2c1x_A UDP-glucose flavonoid 3 99.1 2.2E-11 7.6E-16 104.7 4.5 71 2-80 382-452 (456)
3 2vch_A Hydroquinone glucosyltr 99.1 8.3E-11 2.8E-15 101.7 5.6 73 3-80 397-469 (480)
4 2pq6_A UDP-glucuronosyl/UDP-gl 99.0 9.5E-11 3.2E-15 100.8 4.2 71 2-81 410-480 (482)
5 2acv_A Triterpene UDP-glucosyl 98.9 9.1E-10 3.1E-14 94.6 4.5 70 3-79 390-462 (463)
6 2iya_A OLEI, oleandomycin glyc 81.8 1.8 6.2E-05 35.1 4.9 43 5-58 362-404 (424)
7 2p6p_A Glycosyl transferase; X 64.7 10 0.00035 30.0 5.2 43 5-58 320-362 (384)
8 3rsc_A CALG2; TDP, enediyne, s 58.4 20 0.00069 28.5 5.9 30 25-57 366-395 (415)
9 3ia7_A CALG4; glycosysltransfe 53.6 28 0.00095 27.2 5.9 43 25-74 351-393 (402)
10 1iir_A Glycosyltransferase GTF 51.8 19 0.00067 29.0 4.9 42 4-57 341-382 (415)
11 2o6l_A UDP-glucuronosyltransfe 51.4 8.2 0.00028 27.1 2.2 31 25-58 139-169 (170)
12 2yjn_A ERYCIII, glycosyltransf 42.7 35 0.0012 27.6 5.1 41 6-57 377-417 (441)
13 2iyf_A OLED, oleandomycin glyc 41.0 20 0.00069 28.7 3.3 30 25-57 352-381 (430)
14 3lmd_A Geranylgeranyl pyrophos 39.1 1E+02 0.0035 25.6 7.4 62 25-86 292-355 (360)
15 2ccm_A Calexcitin; EF hand, ca 38.2 43 0.0015 23.3 4.4 60 20-80 26-92 (191)
16 3mzv_A Decaprenyl diphosphate 37.0 99 0.0034 25.3 7.0 61 25-85 273-335 (341)
17 1rrv_A Glycosyltransferase GTF 35.5 13 0.00045 29.9 1.4 41 5-57 343-383 (416)
18 2sas_A Sarcoplasmic calcium-bi 32.3 51 0.0017 22.4 3.9 60 20-80 22-88 (185)
19 3rmg_A Octaprenyl-diphosphate 31.8 1.4E+02 0.0047 24.4 7.0 61 25-85 266-328 (334)
20 4amg_A Snogd; transferase, pol 27.6 28 0.00097 27.3 2.1 25 31-58 359-383 (400)
21 3pko_A Geranylgeranyl pyrophos 25.9 1.8E+02 0.0063 23.6 6.8 57 25-81 274-332 (334)
22 4dhd_A Polyprenyl synthetase; 24.6 2.7E+02 0.0092 22.8 7.6 57 25-82 279-335 (358)
23 3kxe_C Antitoxin protein PARD- 22.8 1E+02 0.0035 20.6 3.9 50 28-83 32-81 (88)
24 4fzr_A SSFS6; structural genom 20.9 1.8E+02 0.0061 22.7 5.6 29 25-56 353-381 (398)
25 3nxa_A Protein S100-A16; S100 20.4 12 0.00043 25.0 -1.2 57 21-81 28-84 (100)
26 3oyr_A Trans-isoprenyl diphosp 20.4 1.7E+02 0.0058 24.0 5.5 56 26-81 286-343 (345)
No 1
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=99.22 E-value=5.7e-12 Score=109.55 Aligned_cols=70 Identities=36% Similarity=0.491 Sum_probs=63.5
Q ss_pred eeeeeeeeEEeeeeccccccccccchhHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHh
Q 035863 2 VNEVLKIGVGVGIQKWCRIVGDFVKREKIEKAVNEIMVGDRAEEMRSRAKALGKMAKRAVENGGSSYSDLSALIEENC 79 (146)
Q Consensus 2 VvevwkIGV~V~~~~~~~~~G~~V~reEI~~aIr~vM~gEeG~emR~rA~eLke~Ar~Av~eGGSS~~nL~~fV~~l~ 79 (146)
+++.|++|+.+.. +. +++++|+++|+++|++++|+++|+|+++|++.+++|+.+||||++||++||+++.
T Consensus 384 v~~~~g~Gv~l~~-------~~-~~~~~l~~av~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~~v~~i~ 453 (454)
T 3hbf_A 384 TESVLEIGVGVDN-------GV-LTKESIKKALELTMSSEKGGIMRQKIVKLKESAFKAVEQNGTSAMDFTTLIQIVT 453 (454)
T ss_dssp HHTTSCSEEECGG-------GS-CCHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHT
T ss_pred HHHhhCeeEEecC-------CC-CCHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHHhhccCCCHHHHHHHHHHHHh
Confidence 4556999999862 35 8999999999999988889999999999999999999999999999999999885
No 2
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=99.14 E-value=2.2e-11 Score=104.67 Aligned_cols=71 Identities=27% Similarity=0.442 Sum_probs=63.9
Q ss_pred eeeeeeeeEEeeeeccccccccccchhHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHhh
Q 035863 2 VNEVLKIGVGVGIQKWCRIVGDFVKREKIEKAVNEIMVGDRAEEMRSRAKALGKMAKRAVENGGSSYSDLSALIEENCS 80 (146)
Q Consensus 2 VvevwkIGV~V~~~~~~~~~G~~V~reEI~~aIr~vM~gEeG~emR~rA~eLke~Ar~Av~eGGSS~~nL~~fV~~l~~ 80 (146)
+++.|++|+.+.. +. +++++|+++|+++|++++|+++|+|+++|++.+++|+.+||||++||++||+++++
T Consensus 382 l~~~~g~g~~l~~-------~~-~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~~v~~~~~ 452 (456)
T 2c1x_A 382 VEDVLEIGVRIEG-------GV-FTKSGLMSCFDQILSQEKGKKLRENLRALRETADRAVGPKGSSTENFITLVDLVSK 452 (456)
T ss_dssp HHHTSCCEEECGG-------GS-CCHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHTS
T ss_pred HHHHhCeEEEecC-------CC-cCHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHHhhhcCCcHHHHHHHHHHHHHh
Confidence 4567899999852 34 89999999999999887788999999999999999999999999999999999864
No 3
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=99.08 E-value=8.3e-11 Score=101.70 Aligned_cols=73 Identities=23% Similarity=0.332 Sum_probs=65.6
Q ss_pred eeeeeeeEEeeeeccccccccccchhHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHhh
Q 035863 3 NEVLKIGVGVGIQKWCRIVGDFVKREKIEKAVNEIMVGDRAEEMRSRAKALGKMAKRAVENGGSSYSDLSALIEENCS 80 (146)
Q Consensus 3 vevwkIGV~V~~~~~~~~~G~~V~reEI~~aIr~vM~gEeG~emR~rA~eLke~Ar~Av~eGGSS~~nL~~fV~~l~~ 80 (146)
+++|++|+.+..+ .++. +++++|+++|+++|++|+++++|+||++|++.+++|+.+||||+.+|++||+.+++
T Consensus 397 ~~~~G~g~~l~~~----~~~~-~~~~~l~~av~~vl~~~~~~~~r~~a~~l~~~~~~a~~~gGss~~~~~~~v~~~~~ 469 (480)
T 2vch_A 397 SEDIRAALRPRAG----DDGL-VRREEVARVVKGLMEGEEGKGVRNKMKELKEAACRVLKDDGTSTKALSLVALKWKA 469 (480)
T ss_dssp HHTTCCEECCCCC----TTSC-CCHHHHHHHHHHHHTSTHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHHH
T ss_pred HHHhCeEEEeecc----cCCc-cCHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHH
Confidence 5789999998632 2356 99999999999999988889999999999999999999999999999999999975
No 4
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=99.04 E-value=9.5e-11 Score=100.80 Aligned_cols=71 Identities=31% Similarity=0.590 Sum_probs=63.3
Q ss_pred eeeeeeeeEEeeeeccccccccccchhHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHhhc
Q 035863 2 VNEVLKIGVGVGIQKWCRIVGDFVKREKIEKAVNEIMVGDRAEEMRSRAKALGKMAKRAVENGGSSYSDLSALIEENCSR 81 (146)
Q Consensus 2 VvevwkIGV~V~~~~~~~~~G~~V~reEI~~aIr~vM~gEeG~emR~rA~eLke~Ar~Av~eGGSS~~nL~~fV~~l~~~ 81 (146)
++++|++|+.+. . . +++++|.++|+++|++++++++|+|+++|++.+++|+.+||||++|+++|+++++++
T Consensus 410 ~~~~~G~g~~l~-~-------~-~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGss~~~l~~~v~~~~~~ 480 (482)
T 2pq6_A 410 ICNEWEIGMEID-T-------N-VKREELAKLINEVIAGDKGKKMKQKAMELKKKAEENTRPGGCSYMNLNKVIKDVLLK 480 (482)
T ss_dssp HHHTSCCEEECC-S-------S-CCHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHTTCC
T ss_pred HHHHhCEEEEEC-C-------C-CCHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHhc
Confidence 345789999985 2 3 899999999999998777889999999999999999999999999999999998654
No 5
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=98.89 E-value=9.1e-10 Score=94.63 Aligned_cols=70 Identities=26% Similarity=0.422 Sum_probs=60.0
Q ss_pred eeeeeeeEEee-eeccccccc--cccchhHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHh
Q 035863 3 NEVLKIGVGVG-IQKWCRIVG--DFVKREKIEKAVNEIMVGDRAEEMRSRAKALGKMAKRAVENGGSSYSDLSALIEENC 79 (146)
Q Consensus 3 vevwkIGV~V~-~~~~~~~~G--~~V~reEI~~aIr~vM~gEeG~emR~rA~eLke~Ar~Av~eGGSS~~nL~~fV~~l~ 79 (146)
+++|++|+.+. .. .++ . +++++|.++|+++|+ +++++|+|+++|++.+++|+.+||||+.||++||++++
T Consensus 390 v~~~g~g~~l~~~~----~~~~~~-~~~~~l~~ai~~ll~--~~~~~r~~a~~l~~~~~~a~~~gGss~~~l~~~v~~~~ 462 (463)
T 2acv_A 390 VKEWGVGLGLRVDY----RKGSDV-VAAEEIEKGLKDLMD--KDSIVHKKVQEMKEMSRNAVVDGGSSLISVGKLIDDIT 462 (463)
T ss_dssp HHTSCCEEESCSSC----CTTCCC-CCHHHHHHHHHHHTC--TTCTHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHH
T ss_pred HHHcCeEEEEeccc----CCCCcc-ccHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhc
Confidence 57899999983 11 123 5 899999999999995 34579999999999999999999999999999999884
No 6
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=81.79 E-value=1.8 Score=35.05 Aligned_cols=43 Identities=21% Similarity=0.258 Sum_probs=32.6
Q ss_pred eeeeeEEeeeeccccccccccchhHHHHHHHHHhcCCchHHHHHHHHHHHHHHH
Q 035863 5 VLKIGVGVGIQKWCRIVGDFVKREKIEKAVNEIMVGDRAEEMRSRAKALGKMAK 58 (146)
Q Consensus 5 vwkIGV~V~~~~~~~~~G~~V~reEI~~aIr~vM~gEeG~emR~rA~eLke~Ar 58 (146)
.+++|+.+.. +. ++.+++.++|+++|++ .++|++++++++..+
T Consensus 362 ~~g~g~~~~~-------~~-~~~~~l~~~i~~ll~~---~~~~~~~~~~~~~~~ 404 (424)
T 2iya_A 362 ELGLGRHIPR-------DQ-VTAEKLREAVLAVASD---PGVAERLAAVRQEIR 404 (424)
T ss_dssp HTTSEEECCG-------GG-CCHHHHHHHHHHHHHC---HHHHHHHHHHHHHHH
T ss_pred HCCCEEEcCc-------CC-CCHHHHHHHHHHHHcC---HHHHHHHHHHHHHHH
Confidence 4677877752 23 7899999999999974 358888888887754
No 7
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=64.74 E-value=10 Score=29.97 Aligned_cols=43 Identities=16% Similarity=0.224 Sum_probs=30.5
Q ss_pred eeeeeEEeeeeccccccccccchhHHHHHHHHHhcCCchHHHHHHHHHHHHHHH
Q 035863 5 VLKIGVGVGIQKWCRIVGDFVKREKIEKAVNEIMVGDRAEEMRSRAKALGKMAK 58 (146)
Q Consensus 5 vwkIGV~V~~~~~~~~~G~~V~reEI~~aIr~vM~gEeG~emR~rA~eLke~Ar 58 (146)
.+++|+.+.. +. ++.+++.++|+++|.+ ..+|+++.++++..+
T Consensus 320 ~~g~g~~~~~-------~~-~~~~~l~~~i~~ll~~---~~~~~~~~~~~~~~~ 362 (384)
T 2p6p_A 320 DYGAAIALLP-------GE-DSTEAIADSCQELQAK---DTYARRAQDLSREIS 362 (384)
T ss_dssp HHTSEEECCT-------TC-CCHHHHHHHHHHHHHC---HHHHHHHHHHHHHHH
T ss_pred HCCCeEecCc-------CC-CCHHHHHHHHHHHHcC---HHHHHHHHHHHHHHH
Confidence 3456666542 22 6889999999999974 357888888777653
No 8
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=58.44 E-value=20 Score=28.46 Aligned_cols=30 Identities=13% Similarity=0.223 Sum_probs=24.1
Q ss_pred cchhHHHHHHHHHhcCCchHHHHHHHHHHHHHH
Q 035863 25 VKREKIEKAVNEIMVGDRAEEMRSRAKALGKMA 57 (146)
Q Consensus 25 V~reEI~~aIr~vM~gEeG~emR~rA~eLke~A 57 (146)
++.+++.++|++++.+ ..+|+++.++++..
T Consensus 366 ~~~~~l~~~i~~ll~~---~~~~~~~~~~~~~~ 395 (415)
T 3rsc_A 366 ADGDTLLAAVGAVAAD---PALLARVEAMRGHV 395 (415)
T ss_dssp CCHHHHHHHHHHHHTC---HHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHcC---HHHHHHHHHHHHHH
Confidence 6889999999999974 36788877777664
No 9
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=53.60 E-value=28 Score=27.20 Aligned_cols=43 Identities=14% Similarity=0.279 Sum_probs=28.8
Q ss_pred cchhHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHH
Q 035863 25 VKREKIEKAVNEIMVGDRAEEMRSRAKALGKMAKRAVENGGSSYSDLSAL 74 (146)
Q Consensus 25 V~reEI~~aIr~vM~gEeG~emR~rA~eLke~Ar~Av~eGGSS~~nL~~f 74 (146)
++.+++.++|++++++ .++|+++.++++.. .+++++.+..+.+
T Consensus 351 ~~~~~l~~~~~~ll~~---~~~~~~~~~~~~~~----~~~~~~~~~~~~i 393 (402)
T 3ia7_A 351 LEPASIREAVERLAAD---SAVRERVRRMQRDI----LSSGGPARAADEV 393 (402)
T ss_dssp CSHHHHHHHHHHHHHC---HHHHHHHHHHHHHH----HTSCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHcC---HHHHHHHHHHHHHH----hhCChHHHHHHHH
Confidence 6889999999999974 35777777766554 3444444444433
No 10
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=51.80 E-value=19 Score=28.95 Aligned_cols=42 Identities=19% Similarity=0.166 Sum_probs=30.4
Q ss_pred eeeeeeEEeeeeccccccccccchhHHHHHHHHHhcCCchHHHHHHHHHHHHHH
Q 035863 4 EVLKIGVGVGIQKWCRIVGDFVKREKIEKAVNEIMVGDRAEEMRSRAKALGKMA 57 (146)
Q Consensus 4 evwkIGV~V~~~~~~~~~G~~V~reEI~~aIr~vM~gEeG~emR~rA~eLke~A 57 (146)
+.+++|+.+.. .. ++.+++.++|+++ .+ ..+|++++++++..
T Consensus 341 ~~~g~g~~~~~-------~~-~~~~~l~~~i~~l-~~---~~~~~~~~~~~~~~ 382 (415)
T 1iir_A 341 AELGVGVAHDG-------PI-PTFDSLSAALATA-LT---PETHARATAVAGTI 382 (415)
T ss_dssp HHHTSEEECSS-------SS-CCHHHHHHHHHHH-TS---HHHHHHHHHHHHHS
T ss_pred HHCCCcccCCc-------CC-CCHHHHHHHHHHH-cC---HHHHHHHHHHHHHH
Confidence 34677776642 13 7889999999999 53 46888888777664
No 11
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=51.37 E-value=8.2 Score=27.10 Aligned_cols=31 Identities=6% Similarity=0.243 Sum_probs=22.6
Q ss_pred cchhHHHHHHHHHhcCCchHHHHHHHHHHHHHHH
Q 035863 25 VKREKIEKAVNEIMVGDRAEEMRSRAKALGKMAK 58 (146)
Q Consensus 25 V~reEI~~aIr~vM~gEeG~emR~rA~eLke~Ar 58 (146)
++.+++.++|++++.++ .+|++++++++..+
T Consensus 139 ~~~~~l~~~i~~ll~~~---~~~~~a~~~~~~~~ 169 (170)
T 2o6l_A 139 MSSTDLLNALKRVINDP---SYKENVMKLSRIQH 169 (170)
T ss_dssp CCHHHHHHHHHHHHHCH---HHHHHHHHHC----
T ss_pred CCHHHHHHHHHHHHcCH---HHHHHHHHHHHHhh
Confidence 47789999999999743 58999988887654
No 12
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=42.72 E-value=35 Score=27.64 Aligned_cols=41 Identities=10% Similarity=0.295 Sum_probs=29.2
Q ss_pred eeeeEEeeeeccccccccccchhHHHHHHHHHhcCCchHHHHHHHHHHHHHH
Q 035863 6 LKIGVGVGIQKWCRIVGDFVKREKIEKAVNEIMVGDRAEEMRSRAKALGKMA 57 (146)
Q Consensus 6 wkIGV~V~~~~~~~~~G~~V~reEI~~aIr~vM~gEeG~emR~rA~eLke~A 57 (146)
.++|+.+.. .. ++.+++.++|++++.+ ..+|+++.++++..
T Consensus 377 ~g~g~~~~~-------~~-~~~~~l~~~i~~ll~~---~~~~~~~~~~~~~~ 417 (441)
T 2yjn_A 377 FGAGIALPV-------PE-LTPDQLRESVKRVLDD---PAHRAGAARMRDDM 417 (441)
T ss_dssp HTSEEECCT-------TT-CCHHHHHHHHHHHHHC---HHHHHHHHHHHHHH
T ss_pred cCCEEEccc-------cc-CCHHHHHHHHHHHhcC---HHHHHHHHHHHHHH
Confidence 456666542 23 6889999999999974 36778877777654
No 13
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=40.99 E-value=20 Score=28.68 Aligned_cols=30 Identities=7% Similarity=0.137 Sum_probs=22.7
Q ss_pred cchhHHHHHHHHHhcCCchHHHHHHHHHHHHHH
Q 035863 25 VKREKIEKAVNEIMVGDRAEEMRSRAKALGKMA 57 (146)
Q Consensus 25 V~reEI~~aIr~vM~gEeG~emR~rA~eLke~A 57 (146)
++.+++.++|+++|++ .++|+++.+++...
T Consensus 352 ~~~~~l~~~i~~ll~~---~~~~~~~~~~~~~~ 381 (430)
T 2iyf_A 352 ATADLLRETALALVDD---PEVARRLRRIQAEM 381 (430)
T ss_dssp CCHHHHHHHHHHHHHC---HHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHcC---HHHHHHHHHHHHHH
Confidence 6889999999999974 35677766666554
No 14
>3lmd_A Geranylgeranyl pyrophosphate synthase; isoprenyl diphosphate synthase, structural genomics, PSI, protein structure initiative, nysgrc; 1.90A {Corynebacterium glutamicum} PDB: 3q2q_A*
Probab=39.06 E-value=1e+02 Score=25.63 Aligned_cols=62 Identities=8% Similarity=0.064 Sum_probs=42.5
Q ss_pred cchhHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHhc--CCCcHHHHHHHHHHHhhcccCCC
Q 035863 25 VKREKIEKAVNEIMVGDRAEEMRSRAKALGKMAKRAVEN--GGSSYSDLSALIEENCSRWCNSG 86 (146)
Q Consensus 25 V~reEI~~aIr~vM~gEeG~emR~rA~eLke~Ar~Av~e--GGSS~~nL~~fV~~l~~~~~~~~ 86 (146)
.+.++++++++.+....-=+..++.+.++.+.|.+++.. .+.....|..+++.+.......+
T Consensus 292 ~~~~~~~~~~~ll~~~gal~~a~~~a~~~~~~A~~~L~~lp~~~~~~~L~~La~~~~~R~~~~~ 355 (360)
T 3lmd_A 292 EDDETVNHVLELLSQSGGRQAALDEVYRYMDIANAELDRLPDSTVKEALRNLATFTVKRVGEGH 355 (360)
T ss_dssp CSHHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHTTSCCSHHHHHHHHHHHHHHHTTSTTC
T ss_pred CCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHhccccc
Confidence 345566666655554433367889999999999999874 33445578888888877765543
No 15
>2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo pealeii}
Probab=38.21 E-value=43 Score=23.26 Aligned_cols=60 Identities=12% Similarity=0.136 Sum_probs=32.2
Q ss_pred ccccccchhHHHHHHHHHhc--C-----CchHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHhh
Q 035863 20 IVGDFVKREKIEKAVNEIMV--G-----DRAEEMRSRAKALGKMAKRAVENGGSSYSDLSALIEENCS 80 (146)
Q Consensus 20 ~~G~~V~reEI~~aIr~vM~--g-----EeG~emR~rA~eLke~Ar~Av~eGGSS~~nL~~fV~~l~~ 80 (146)
.+|. ++.+|+...++.+.. | ++-+.+.+....+-+........+|+..-++++|+..+..
T Consensus 26 ~dG~-i~~~E~~~~l~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~~~ 92 (191)
T 2ccm_A 26 HDGV-IEWDDFELAIKKICNLHSWPTDGKKHNEARATLKLIWDGLRKYADENEDEQVTKEEWLKMWAE 92 (191)
T ss_dssp CSSE-ECHHHHHHHHHHHHHHHTCCTTSHHHHHHHHHHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHH
T ss_pred CCCe-eeHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCeECHHHHHHHHHH
Confidence 4677 999999999998841 1 1223333333333333323344445444556666554433
No 16
>3mzv_A Decaprenyl diphosphate synthase; transferase, structural genomics, PSI-2, protein structure initiative; 1.90A {Rhodobacter capsulatus}
Probab=37.01 E-value=99 Score=25.35 Aligned_cols=61 Identities=16% Similarity=0.114 Sum_probs=40.4
Q ss_pred cchhHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHhc--CCCcHHHHHHHHHHHhhcccCC
Q 035863 25 VKREKIEKAVNEIMVGDRAEEMRSRAKALGKMAKRAVEN--GGSSYSDLSALIEENCSRWCNS 85 (146)
Q Consensus 25 V~reEI~~aIr~vM~gEeG~emR~rA~eLke~Ar~Av~e--GGSS~~nL~~fV~~l~~~~~~~ 85 (146)
.+.++++++++.+...+-=+..++.+.++.+.|++++.. .+.....|..+++.+.......
T Consensus 273 ~~~~~~~~i~~~l~~~ga~~~a~~~a~~~~~~A~~~L~~lp~~~~~~~L~~la~~~~~r~~~~ 335 (341)
T 3mzv_A 273 QQDGDLEHAMALMTKHGTLEATRLAAIGWTDTARKALAKLPDHPLRQMLDDLADYVVERVREG 335 (341)
T ss_dssp CCTTHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHTGGGC--
T ss_pred CCHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhccccc
Confidence 345666555544444333356889999999999999874 3444567888888887765544
No 17
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=35.51 E-value=13 Score=29.92 Aligned_cols=41 Identities=29% Similarity=0.371 Sum_probs=29.1
Q ss_pred eeeeeEEeeeeccccccccccchhHHHHHHHHHhcCCchHHHHHHHHHHHHHH
Q 035863 5 VLKIGVGVGIQKWCRIVGDFVKREKIEKAVNEIMVGDRAEEMRSRAKALGKMA 57 (146)
Q Consensus 5 vwkIGV~V~~~~~~~~~G~~V~reEI~~aIr~vM~gEeG~emR~rA~eLke~A 57 (146)
.+++|+.+.. .. ++.+++.++|+++ .+ ..+|++++++++..
T Consensus 343 ~~g~g~~~~~-------~~-~~~~~l~~~i~~l-~~---~~~~~~~~~~~~~~ 383 (416)
T 1rrv_A 343 ALGIGVAHDG-------PT-PTFESLSAALTTV-LA---PETRARAEAVAGMV 383 (416)
T ss_dssp HHTSEEECSS-------SC-CCHHHHHHHHHHH-TS---HHHHHHHHHHTTTC
T ss_pred HCCCccCCCC-------CC-CCHHHHHHHHHHh-hC---HHHHHHHHHHHHHH
Confidence 4567776642 13 7889999999999 63 36788887776654
No 18
>2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5
Probab=32.25 E-value=51 Score=22.40 Aligned_cols=60 Identities=7% Similarity=-0.005 Sum_probs=31.7
Q ss_pred ccccccchhHHHHHHHHHh----cCCch---HHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHhh
Q 035863 20 IVGDFVKREKIEKAVNEIM----VGDRA---EEMRSRAKALGKMAKRAVENGGSSYSDLSALIEENCS 80 (146)
Q Consensus 20 ~~G~~V~reEI~~aIr~vM----~gEeG---~emR~rA~eLke~Ar~Av~eGGSS~~nL~~fV~~l~~ 80 (146)
.+|. ++.+|+..+++.+. ..... +.++.....+-...-......|+..-++++|+..+..
T Consensus 22 ~dG~-i~~~E~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~ 88 (185)
T 2sas_A 22 HDGS-IQDNDFEDMMTRYKEVNKGSLSDADYKSMQASLEDEWRDLKGRADINKDDVVSWEEYLAMWEK 88 (185)
T ss_dssp CSSE-ECHHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHH
T ss_pred CCCe-EcHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEcHHHHHHHHHH
Confidence 4677 99999999998876 22222 2222222222222233344445544556666655543
No 19
>3rmg_A Octaprenyl-diphosphate synthase; structural genomics, protein structure initiative, isoprene biosynthesis, transferase; 2.30A {Bacteroides thetaiotaomicron}
Probab=31.75 E-value=1.4e+02 Score=24.38 Aligned_cols=61 Identities=10% Similarity=0.003 Sum_probs=38.8
Q ss_pred cchhHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHhc--CCCcHHHHHHHHHHHhhcccCC
Q 035863 25 VKREKIEKAVNEIMVGDRAEEMRSRAKALGKMAKRAVEN--GGSSYSDLSALIEENCSRWCNS 85 (146)
Q Consensus 25 V~reEI~~aIr~vM~gEeG~emR~rA~eLke~Ar~Av~e--GGSS~~nL~~fV~~l~~~~~~~ 85 (146)
.+.++++++++.+.+...=+..++.+.++.+.|.+++.. .+.....|..+++.+....+..
T Consensus 266 ~~~~~~~~v~~~i~~~g~~~~a~~~~~~~~~~A~~~L~~lp~~~~~~~L~~l~~~~~~R~~~~ 328 (334)
T 3rmg_A 266 ATPDEIVRLIEFTKDNGGIEYACRTIEQYKKKAFDLLAALPDSNICLALRTYLDYVVAREKEG 328 (334)
T ss_dssp CCHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHCC---
T ss_pred CCHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHhccccc
Confidence 344566555544444333356888999999999999874 3333457888888887765543
No 20
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=27.59 E-value=28 Score=27.26 Aligned_cols=25 Identities=8% Similarity=0.138 Sum_probs=19.2
Q ss_pred HHHHHHHhcCCchHHHHHHHHHHHHHHH
Q 035863 31 EKAVNEIMVGDRAEEMRSRAKALGKMAK 58 (146)
Q Consensus 31 ~~aIr~vM~gEeG~emR~rA~eLke~Ar 58 (146)
+++|+++|++ .++|+|++++++..+
T Consensus 359 ~~al~~lL~d---~~~r~~a~~l~~~~~ 383 (400)
T 4amg_A 359 AEQCRRLLDD---AGLREAALRVRQEMS 383 (400)
T ss_dssp HHHHHHHHHC---HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcC---HHHHHHHHHHHHHHH
Confidence 4577788864 369999999988764
No 21
>3pko_A Geranylgeranyl pyrophosphate synthase; isoprenyl diphosphate synthase, structural genomics, PSI, PR structure initiative, nysgrc; HET: CIT; 1.98A {Lactobacillus brevis} PDB: 3n3d_A
Probab=25.89 E-value=1.8e+02 Score=23.57 Aligned_cols=57 Identities=18% Similarity=0.126 Sum_probs=38.2
Q ss_pred cchhHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHhc--CCCcHHHHHHHHHHHhhc
Q 035863 25 VKREKIEKAVNEIMVGDRAEEMRSRAKALGKMAKRAVEN--GGSSYSDLSALIEENCSR 81 (146)
Q Consensus 25 V~reEI~~aIr~vM~gEeG~emR~rA~eLke~Ar~Av~e--GGSS~~nL~~fV~~l~~~ 81 (146)
.+.++++++++.+...+-=+..++.+.++.+.|.+++.. .+.....|..+++.+...
T Consensus 274 ~~~~~~~~i~~li~~~ga~~~a~~~~~~~~~~A~~~L~~lp~~~~~~~L~~l~~~~~~R 332 (334)
T 3pko_A 274 MTLEDIKHVQALVAQYDGVGAAKQLAQDYTDRALTLIQQLPVGSAQQSLEQLTRLLLRR 332 (334)
T ss_dssp CCHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTTSCSSHHHHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHhc
Confidence 455666665555544433356888899999999998874 333455788888777553
No 22
>4dhd_A Polyprenyl synthetase; isoprenoid synthesis, isoprenoid diphosphate synthase, trans; 1.65A {Pyrobaculum calidifontis} PDB: 4gp1_A* 4gp2_A*
Probab=24.65 E-value=2.7e+02 Score=22.83 Aligned_cols=57 Identities=19% Similarity=0.113 Sum_probs=39.2
Q ss_pred cchhHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHhhcc
Q 035863 25 VKREKIEKAVNEIMVGDRAEEMRSRAKALGKMAKRAVENGGSSYSDLSALIEENCSRW 82 (146)
Q Consensus 25 V~reEI~~aIr~vM~gEeG~emR~rA~eLke~Ar~Av~eGGSS~~nL~~fV~~l~~~~ 82 (146)
.+.++++++++.+-...-=+..++.+.++.+.|.+++..=+.+. .|..+++.+....
T Consensus 279 ~~~~~~~~i~~li~~~gai~~a~~~a~~~~~~A~~~L~~lp~~~-~L~~la~~~~~R~ 335 (358)
T 4dhd_A 279 VEEADVREAVALLDSVGAREEALRLAARYREEAERHLAKIPNNG-TLKELLDFIVARE 335 (358)
T ss_dssp CCHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHTTSSSCH-HHHHHHHHHTTTT
T ss_pred CCHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHcCCCCH-HHHHHHHHHHhcc
Confidence 45567766555554433335688999999999999987533444 7888888886553
No 23
>3kxe_C Antitoxin protein PARD-1; complex, TA system, protein binding; 2.60A {Caulobacter crescentus NA1000}
Probab=22.79 E-value=1e+02 Score=20.64 Aligned_cols=50 Identities=22% Similarity=0.175 Sum_probs=30.9
Q ss_pred hHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHhhccc
Q 035863 28 EKIEKAVNEIMVGDRAEEMRSRAKALGKMAKRAVENGGSSYSDLSALIEENCSRWC 83 (146)
Q Consensus 28 eEI~~aIr~vM~gEeG~emR~rA~eLke~Ar~Av~eGGSS~~nL~~fV~~l~~~~~ 83 (146)
|-|..+|+.+... ..+...|+.....+...|-+...+.+.|+..++....
T Consensus 32 EviR~~lR~l~~r------e~~l~~Lr~~l~~G~~Sg~~~~~d~d~v~a~~~~~~~ 81 (88)
T 3kxe_C 32 EVIRAGLRLLEEN------EAKLAALRAALIEGEESGFIEDFDFDAFIEERSRASA 81 (88)
T ss_dssp HHHHHHHHHHHHH------HHHHHHHHHHHHHHHHTCEESSCCHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHH------hHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHh
Confidence 5566667666642 1245667877777765544333688999988876543
No 24
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=20.90 E-value=1.8e+02 Score=22.73 Aligned_cols=29 Identities=17% Similarity=0.099 Sum_probs=18.4
Q ss_pred cchhHHHHHHHHHhcCCchHHHHHHHHHHHHH
Q 035863 25 VKREKIEKAVNEIMVGDRAEEMRSRAKALGKM 56 (146)
Q Consensus 25 V~reEI~~aIr~vM~gEeG~emR~rA~eLke~ 56 (146)
.+.+++.++|++++.+. ..|+++.++...
T Consensus 353 ~~~~~l~~ai~~ll~~~---~~~~~~~~~~~~ 381 (398)
T 4fzr_A 353 AGVESVLAACARIRDDS---SYVGNARRLAAE 381 (398)
T ss_dssp ----CHHHHHHHHHHCT---HHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhCH---HHHHHHHHHHHH
Confidence 57789999999999754 466666655544
No 25
>3nxa_A Protein S100-A16; S100 family, calcium binding protein, APO, EF-hand calcium binding proteins, S100 proteins, protein dynamics, binding protein; 2.10A {Homo sapiens} SCOP: a.39.1.0 PDB: 2l0u_A 2l0v_A 2l50_A 2l51_A
Probab=20.44 E-value=12 Score=25.00 Aligned_cols=57 Identities=5% Similarity=0.059 Sum_probs=33.1
Q ss_pred cccccchhHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHhhc
Q 035863 21 VGDFVKREKIEKAVNEIMVGDRAEEMRSRAKALGKMAKRAVENGGSSYSDLSALIEENCSR 81 (146)
Q Consensus 21 ~G~~V~reEI~~aIr~vM~gEeG~emR~rA~eLke~Ar~Av~eGGSS~~nL~~fV~~l~~~ 81 (146)
+|. ++++|+...++..+...-+.. ..-.++.+..+. +...|....++++|+.-+...
T Consensus 28 ~G~-Is~~EL~~~l~~~~~~~l~~~--~~~~ev~~~i~~-~D~d~DG~Idf~EF~~~m~~~ 84 (100)
T 3nxa_A 28 KNK-ISKSSFREMLQKELNHMLSDT--GNRKAADKLIQN-LDANHDGRISFDEYWTLIGGI 84 (100)
T ss_dssp TTC-BCHHHHHHHHHHHSTTTTCSS--HHHHHHHHHHHH-SCCCSSCCBCHHHHHHHHHHH
T ss_pred CCe-EcHHHHHHHHHHHcccccccc--ccHHHHHHHHHH-hCCCCCCCCcHHHHHHHHHHH
Confidence 477 999999999987653211100 111244444433 344566667788888766554
No 26
>3oyr_A Trans-isoprenyl diphosphate synthase; isoprenyl synthase, PSI, protein structure initiative; HET: IPE; 2.00A {Caulobacter crescentus}
Probab=20.43 E-value=1.7e+02 Score=24.02 Aligned_cols=56 Identities=18% Similarity=0.127 Sum_probs=36.6
Q ss_pred chhHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHhc--CCCcHHHHHHHHHHHhhc
Q 035863 26 KREKIEKAVNEIMVGDRAEEMRSRAKALGKMAKRAVEN--GGSSYSDLSALIEENCSR 81 (146)
Q Consensus 26 ~reEI~~aIr~vM~gEeG~emR~rA~eLke~Ar~Av~e--GGSS~~nL~~fV~~l~~~ 81 (146)
+.++++++++.+.....=+..++.++++.+.|.+++.. .+.....|..+++.+...
T Consensus 286 ~~~~~~~v~~~i~~~gale~a~~~a~~~~~~A~~~L~~lp~~~~~~~L~~la~~~~~R 343 (345)
T 3oyr_A 286 TEADFRRARELIIGSGALDATLDLAADYADKAKAALAMFPANDWREALEELADFAVSR 343 (345)
T ss_dssp CCSSHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHTTTTSCSSHHHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHhc
Confidence 34556665555544433366889999999999998874 333445777888776543
Done!