Your job contains 1 sequence.
>035867
MWMLNELSSPYGDTDQKLSSYFLQALFGRMTDSGERCYRTLSSASDKTCSFESTRKMVLK
FQEVSPWTTFGHVACNGAIMEAFEGESKLHIVDISNTYCTQWPTLLEALATRTDDTPHLR
LTTVVTSKPVGGSGAGGLAAVQKVMKEIGNRMEKFARLMGVPFEFNVIHHVGDLCDLNLA
ELDVRSDEALAINCIGALHTIAAVDDRRDVLISNLRSLQPRIITVVEEEVDLDVGIDGLE
FVKGFQECLRWFRVYFESLDESFTKTSNERLMLERAAGRAIVDLVACQPSESTERRETAT
RWSGRLHGAGFSPFMFSDEVCDDVRALLRRYKEGWSMAQCPDAGIFLSWKDHTVVWASAW
RP
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 035867
(362 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2120106 - symbol:SHR "AT4G37650" species:3702 ... 1356 1.5e-138 1
TAIR|locus:2008076 - symbol:SCL5 "AT1G50600" species:3702... 467 2.4e-44 1
TAIR|locus:2083073 - symbol:AT3G49950 "AT3G49950" species... 458 2.2e-43 1
TAIR|locus:2164783 - symbol:PAT1 "AT5G48150" species:3702... 455 4.5e-43 1
TAIR|locus:2026982 - symbol:SCL1 "AT1G21450" species:3702... 417 4.8e-39 1
TAIR|locus:2099624 - symbol:RGL2 "RGA-like 2" species:370... 397 6.3e-37 1
TAIR|locus:2008086 - symbol:SCL3 "AT1G50420" species:3702... 269 1.4e-36 2
TAIR|locus:2006747 - symbol:GAI "GIBBERELLIC ACID INSENSI... 360 7.1e-33 1
TAIR|locus:2005516 - symbol:RGA1 "REPRESSOR OF GA1-3 1" s... 357 3.4e-32 1
TAIR|locus:2157477 - symbol:RGL3 "RGA-like protein 3" spe... 348 1.5e-31 1
TAIR|locus:2174974 - symbol:AT5G66770 "AT5G66770" species... 348 3.3e-31 1
TAIR|locus:2044973 - symbol:SCL21 "AT2G04890" species:370... 339 8.8e-31 1
TAIR|locus:2020487 - symbol:LAS "AT1G55580" species:3702 ... 305 1.3e-30 2
TAIR|locus:2025022 - symbol:SCL14 "SCARECROW-like 14" spe... 325 2.6e-28 1
TAIR|locus:2101694 - symbol:AT3G50650 "AT3G50650" species... 315 1.1e-27 1
UNIPROTKB|Q84MM9 - symbol:MOC1 "Protein MONOCULM 1" speci... 308 1.7e-27 1
TAIR|locus:2075155 - symbol:AT3G46600 species:3702 "Arabi... 299 8.1e-26 1
TAIR|locus:2040701 - symbol:AT2G37650 species:3702 "Arabi... 301 8.7e-26 1
TAIR|locus:2148293 - symbol:AT5G59450 species:3702 "Arabi... 298 1.2e-25 1
TAIR|locus:2025032 - symbol:AT1G07520 "AT1G07520" species... 286 3.4e-24 1
TAIR|locus:2184625 - symbol:SCL8 "AT5G52510" species:3702... 283 5.8e-24 1
TAIR|locus:2132482 - symbol:AT4G08250 "AT4G08250" species... 273 2.9e-23 1
TAIR|locus:2201557 - symbol:RGL1 "RGA-like 1" species:370... 273 3.6e-23 1
TAIR|locus:2080345 - symbol:SCR "SCARECROW" species:3702 ... 243 2.8e-18 1
TAIR|locus:2087994 - symbol:AT3G13840 "AT3G13840" species... 231 5.5e-17 1
TAIR|locus:2015243 - symbol:AT1G63100 "AT1G63100" species... 224 6.9e-16 1
TAIR|locus:2165685 - symbol:AT5G41920 "AT5G41920" species... 205 3.9e-14 1
TAIR|locus:2115340 - symbol:HAM4 "AT4G36710" species:3702... 185 1.3e-11 1
TAIR|locus:2101801 - symbol:HAM2 "AT3G60630" species:3702... 186 1.6e-11 1
TAIR|locus:2126901 - symbol:HAM3 "AT4G00150" species:3702... 131 4.0e-08 2
TAIR|locus:1009023400 - symbol:AT5G67411 "AT5G67411" spec... 141 4.1e-08 1
UNIPROTKB|Q6DLS1 - symbol:SCL1 "SCARECROW-like protein" s... 151 8.3e-08 1
UNIPROTKB|Q1AHE4 - symbol:SCL "SCARECROW-like protein" sp... 110 9.9e-06 1
TAIR|locus:2055622 - symbol:HAM1 "AT2G45160" species:3702... 132 1.8e-05 1
>TAIR|locus:2120106 [details] [associations]
symbol:SHR "AT4G37650" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS;TAS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0008356 "asymmetric cell division"
evidence=IMP] [GO:0009956 "radial pattern formation" evidence=IMP]
[GO:0032350 "regulation of hormone metabolic process" evidence=NAS]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0055072 "iron ion
homeostasis" evidence=IMP] [GO:0045930 "negative regulation of
mitotic cell cycle" evidence=IMP] [GO:0048366 "leaf development"
evidence=IMP] Pfam:PF03514 GO:GO:0005634 GO:GO:0005737
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 GO:GO:0007049 EMBL:AL035605 EMBL:AL161591
GO:GO:0048366 GO:GO:0008356 GO:GO:0055072 GO:GO:0009956
GO:GO:0032350 InterPro:IPR005202 PROSITE:PS50985 EMBL:AF233752
EMBL:BT033026 EMBL:AY074547 IPI:IPI00525426 PIR:T04722
RefSeq:NP_195480.1 UniGene:At.2816 UniGene:At.71893 IntAct:Q9SZF7
STRING:Q9SZF7 PaxDb:Q9SZF7 PRIDE:Q9SZF7 EnsemblPlants:AT4G37650.1
GeneID:829919 KEGG:ath:AT4G37650 GeneFarm:4260 TAIR:At4g37650
eggNOG:NOG301144 HOGENOM:HOG000078767 InParanoid:Q9SZF7 OMA:EIGNRME
PhylomeDB:Q9SZF7 ProtClustDB:CLSN2685807 Genevestigator:Q9SZF7
Uniprot:Q9SZF7
Length = 531
Score = 1356 (482.4 bits), Expect = 1.5e-138, P = 1.5e-138
Identities = 262/370 (70%), Positives = 304/370 (82%)
Query: 1 MWMLNELSSPYGDTDQKLSSYFLQALFGRMTDSGERCYRTL--SSASDKTCSFESTRKMV 58
+W LNELSSPYGDT+QKL+SYFLQALF RMT SGERCYRT+ ++A++KTCSFESTRK V
Sbjct: 166 LWTLNELSSPYGDTEQKLASYFLQALFNRMTGSGERCYRTMVTAAATEKTCSFESTRKTV 225
Query: 59 LKFQEVSPWTTFGHVACNGAIMEAFEGESKLHIVDISNTYCTQWPTLLEALATRTDDTPH 118
LKFQEVSPW TFGHVA NGAI+EA +GE+K+HIVDIS+T+CTQWPTLLEALATR+DDTPH
Sbjct: 226 LKFQEVSPWATFGHVAANGAILEAVDGEAKIHIVDISSTFCTQWPTLLEALATRSDDTPH 285
Query: 119 LRLTTVVTSKPVXXXXXXXXXXVQKVMKEIGNRMEKFARLMGVPFEFNVIHHVGDLCDLN 178
LRLTTVV + ++MKEIGNRMEKFARLMGVPF+FN+IHHVGDL + +
Sbjct: 286 LRLTTVVVANKFVNDQTAS----HRMMKEIGNRMEKFARLMGVPFKFNIIHHVGDLSEFD 341
Query: 179 LAELDVRSDEALAINCIGALHTIAAVDDRRDVLISNLRSLQPRIITVVEEEVDL----DV 234
L ELDV+ DE LAINC+GA+H IA+ RD +IS+ R L+PRI+TVVEEE DL +
Sbjct: 342 LNELDVKPDEVLAINCVGAMHGIASRGSPRDAVISSFRRLRPRIVTVVEEEADLVGEEEG 401
Query: 235 GIDGLEFVKGFQECLRWFRVYFESLDESFTKTSNERLMLERAAGRAIVDLVACQPSESTE 294
G D EF++GF ECLRWFRV FES +ESF +TSNERLMLERAAGRAIVDLVAC+PS+STE
Sbjct: 402 GFDD-EFLRGFGECLRWFRVCFESWEESFPRTSNERLMLERAAGRAIVDLVACEPSDSTE 460
Query: 295 RRETATRWSGRLHGAGFSPFMFSDEVCDDVRALLRRYKEG-WSMAQCPDA-GIFLSWKDH 352
RRETA +WS R+ +GF +SDEV DDVRALLRRYKEG WSM QCPDA GIFL W+D
Sbjct: 461 RRETARKWSRRMRNSGFGAVGYSDEVADDVRALLRRYKEGVWSMVQCPDAAGIFLCWRDQ 520
Query: 353 TVVWASAWRP 362
VVWASAWRP
Sbjct: 521 PVVWASAWRP 530
>TAIR|locus:2008076 [details] [associations]
symbol:SCL5 "AT1G50600" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0005829 "cytosol" evidence=IDA] Pfam:PF03514
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005634
GO:GO:0003700 GO:GO:0006351 EMBL:AC079279 EMBL:AC012561
HOGENOM:HOG000238577 InterPro:IPR005202 PROSITE:PS50985
eggNOG:NOG287245 EMBL:AY034929 EMBL:AY039611 EMBL:BT000883
EMBL:AF036302 IPI:IPI00519165 PIR:E96542 PIR:T51236
RefSeq:NP_175475.2 UniGene:At.14827 STRING:Q8H125 PaxDb:Q8H125
PRIDE:Q8H125 EnsemblPlants:AT1G50600.1 GeneID:841482
KEGG:ath:AT1G50600 GeneFarm:4229 TAIR:At1g50600 InParanoid:Q8H125
OMA:REERHEP PhylomeDB:Q8H125 ProtClustDB:CLSN2918355
ArrayExpress:Q8H125 Genevestigator:Q8H125 Uniprot:Q8H125
Length = 597
Score = 467 (169.5 bits), Expect = 2.4e-44, P = 2.4e-44
Identities = 116/370 (31%), Positives = 189/370 (51%)
Query: 2 WMLNELS---SPYGDTDQKLSSYFLQALFGRMTDSGERCYRTLSSASDKTCSFESTRKMV 58
W++++L S G+ Q+L +Y L+ L R+ SG Y+ L D T T +
Sbjct: 248 WLISQLQQMVSVSGEPVQRLGAYMLEGLVARLASSGSSIYKALR-CKDPTGPELLTYMHI 306
Query: 59 LKFQEVSPWTTFGHVACNGAIMEAFEGESKLHIVDISNTYCTQWPTLLEALATRTDDTPH 118
L E P+ FG+ + NGAI EA + ES +HI+D + QW +L+ AL R P+
Sbjct: 307 L--YEACPYFKFGYESANGAIAEAVKNESFVHIIDFQISQGGQWVSLIRALGARPGGPPN 364
Query: 119 LRLTTVVTSKPVXXXXXXXXXXVQKVMKEIGNRMEKFARLMGVPFEFNVIHHVGDLC--D 176
+R+T + P Q ++ +G R+ K A + GVPFEF H LC +
Sbjct: 365 VRITGI--DDPRSSFAR------QGGLELVGQRLGKLAEMCGVPFEF----HGAALCCTE 412
Query: 177 LNLAELDVRSDEALAINCIGALHTI----AAVDDRRDVLISNLRSLQPRIITVVEEEVDL 232
+ + +L VR+ EALA+N LH + V++ RD L+ ++ L P ++T+VE+E +
Sbjct: 413 VEIEKLGVRNGEALAVNFPLVLHHMPDESVTVENHRDRLLRLVKHLSPNVVTLVEQEANT 472
Query: 233 DVGIDGLEFVKGFQECLRWFRVYFESLDESFTKTSNERLMLER-AAGRAIVDLVACQPSE 291
+ F+ F E + + FES+D + ER+ +E+ R +V+L+AC+ E
Sbjct: 473 NTA----PFLPRFVETMNHYLAVFESIDVKLARDHKERINVEQHCLAREVVNLIACEGVE 528
Query: 292 STERRETATRWSGRLHGAGFSPFMFSDEVCDDVRALLRRYKEGWSMAQCPDAGIFLSWKD 351
ER E +W R H AGF P+ S V ++ LL Y E +++ + D ++L WK+
Sbjct: 529 REERHEPLGKWRSRFHMAGFKPYPLSSYVNATIKGLLESYSEKYTLEE-RDGALYLGWKN 587
Query: 352 HTVVWASAWR 361
++ + AWR
Sbjct: 588 QPLITSCAWR 597
>TAIR|locus:2083073 [details] [associations]
symbol:AT3G49950 "AT3G49950" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003700 GO:GO:0006351 EMBL:AL132978
InterPro:IPR005202 PROSITE:PS50985 eggNOG:NOG309215 EMBL:BT012553
EMBL:AK226623 IPI:IPI00534186 PIR:T45848 RefSeq:NP_190564.1
UniGene:At.50260 EnsemblPlants:AT3G49950.1 GeneID:824157
KEGG:ath:AT3G49950 GeneFarm:4259 TAIR:At3g49950
HOGENOM:HOG000241523 InParanoid:Q9SN22 OMA:MSMDFRV PhylomeDB:Q9SN22
ProtClustDB:CLSN2684384 Genevestigator:Q9SN22 Uniprot:Q9SN22
Length = 410
Score = 458 (166.3 bits), Expect = 2.2e-43, P = 2.2e-43
Identities = 121/375 (32%), Positives = 190/375 (50%)
Query: 1 MWMLNELSSPYGDTDQKLSSYFLQALFGRMTDSGERCYRTLS--SASDKTCSFESTRKMV 58
+W+LN ++ P GD+ Q+L+S FL+AL R T+S +D+ F +
Sbjct: 50 LWVLNNIAPPDGDSTQRLTSAFLRALLSRAVSKTPTLSSTISFLPQADELHRFSVVE--L 107
Query: 59 LKFQEVSPWTTFGHVACNGAIMEAFEGESKLHIVDISNTYCTQWPTLLEALATRTDDTPH 118
F +++PW FG +A N AI+ A EG S +HIVD+S T+C Q PTL++A+A+R + P
Sbjct: 108 AAFVDLTPWHRFGFIAANAAILTAVEGYSTVHIVDLSLTHCMQIPTLIDAMASRLNKPPP 167
Query: 119 LRLTTVVTSKPVXXXXXXXXXXVQKVMKEIGNRMEKFARLMGVPFEFNVIHHV-GDLCDL 177
L TVV+S + +E+G+++ FA + EF ++ D
Sbjct: 168 LLKLTVVSSSD------HFPPFINISYEELGSKLVNFATTRNITMEFTIVPSTYSDGFSS 221
Query: 178 NLAELDVRS---DEALAINCIGALHTI------AAVDDRRDVLISNLRSLQPRIITVVEE 228
L +L + +EAL +NC L I ++ R V + LRSL PRI+T++EE
Sbjct: 222 LLQQLRIYPSSFNEALVVNCHMMLRYIPEEPLTSSSSSLRTVFLKQLRSLNPRIVTLIEE 281
Query: 229 EVDLDVGIDGLEFVKGFQECLRWFRVYFESLDESFTKTSNERLMLERAAGRAIVDLVACQ 288
+VDL + L V + +F + F++ D T S +R E I ++VA +
Sbjct: 282 DVDLTS--ENL--VNRLKSAFNYFWIPFDTTD---TFMSEQRRWYEAEISWKIENVVAKE 334
Query: 289 PSESTERRETATRWSGRLHGAGFSPFMFSDEVCDDVRALLRRYKEGWSMA-QCPDAGIFL 347
+E ER ET RW R+ A F ++ DV+A+L + GW M + D + L
Sbjct: 335 GAERVERTETKRRWIERMREAEFGGVRVKEDAVADVKAMLEEHAVGWGMKKEDDDESLVL 394
Query: 348 SWKDHTVVWASAWRP 362
+WK H+VV+A+ W P
Sbjct: 395 TWKGHSVVFATVWVP 409
>TAIR|locus:2164783 [details] [associations]
symbol:PAT1 "AT5G48150" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0004871 "signal transducer activity" evidence=IMP] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0009640 "photomorphogenesis"
evidence=IMP] Pfam:PF03514 GO:GO:0005737 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003700 GO:GO:0006351 GO:GO:0009640
GO:GO:0004871 EMBL:AB023039 HOGENOM:HOG000238577 InterPro:IPR005202
PROSITE:PS50985 EMBL:AF153443 EMBL:BT025326 EMBL:AK117483
IPI:IPI00517897 RefSeq:NP_199626.1 RefSeq:NP_974903.1
UniGene:At.7076 PRIDE:Q9LDL7 EnsemblPlants:AT5G48150.1
EnsemblPlants:AT5G48150.2 GeneID:834867 KEGG:ath:AT5G48150
GeneFarm:4233 TAIR:At5g48150 eggNOG:NOG287245 InParanoid:Q9LDL7
OMA:NSAHARG PhylomeDB:Q9LDL7 ProtClustDB:CLSN2686580
Genevestigator:Q9LDL7 Uniprot:Q9LDL7
Length = 490
Score = 455 (165.2 bits), Expect = 4.5e-43, P = 4.5e-43
Identities = 106/366 (28%), Positives = 189/366 (51%)
Query: 1 MWMLNELSSPYGDTDQKLSSYFLQALFGRMTDSGERCYRTLSSASDKTCSFESTRKMVLK 60
M L ++ S G+ Q+L +Y L+ L ++ SG Y+ L+ + S E M +
Sbjct: 142 MEKLRQMVSVSGEPIQRLGAYLLEGLVAQLASSGSSIYKALNRCPEPA-STELLSYMHIL 200
Query: 61 FQEVSPWTTFGHVACNGAIMEAFEGESKLHIVDISNTYCTQWPTLLEALATRTDDTPHLR 120
+ EV P+ FG+++ NGAI EA + E+++HI+D +QW TL++A A R P +R
Sbjct: 201 Y-EVCPYFKFGYMSANGAIAEAMKEENRVHIIDFQIGQGSQWVTLIQAFAARPGGPPRIR 259
Query: 121 LTTVVTSKPVXXXXXXXXXXVQKVMKEIGNRMEKFARLMGVPFEFNVIHHVGDLCDLNLA 180
+T + + +GNR+ K A+ VPFEFN + + ++
Sbjct: 260 ITGIDDMTSAYARGGG--------LSIVGNRLAKLAKQFNVPFEFNSVSV--SVSEVKPK 309
Query: 181 ELDVRSDEALAINCIGALHTI----AAVDDRRDVLISNLRSLQPRIITVVEEEVDLDVGI 236
L VR EALA+N LH + + ++ RD L+ ++SL P+++T+VE+E + +
Sbjct: 310 NLGVRPGEALAVNFAFVLHHMPDESVSTENHRDRLLRMVKSLSPKVVTLVEQESNTNTAA 369
Query: 237 DGLEFVKGFQECLRWFRVYFESLDESFTKTSNERLMLER-AAGRAIVDLVACQPSESTER 295
F F E + ++ FES+D + + +R+ +E+ R +V+++AC+ ++ ER
Sbjct: 370 ----FFPRFMETMNYYAAMFESIDVTLPRDHKQRINVEQHCLARDVVNIIACEGADRVER 425
Query: 296 RETATRWSGRLHGAGFSPFMFSDEVCDDVRALLRRYKEGWSMAQCPDAGIFLSWKDHTVV 355
E +W R AGF+P+ S V +++LLR Y + + + + D ++L W +V
Sbjct: 426 HELLGKWRSRFGMAGFTPYPLSPLVNSTIKSLLRNYSDKYRLEE-RDGALYLGWMHRDLV 484
Query: 356 WASAWR 361
+ AW+
Sbjct: 485 ASCAWK 490
>TAIR|locus:2026982 [details] [associations]
symbol:SCL1 "AT1G21450" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] Pfam:PF03514 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
EMBL:AC015447 HOGENOM:HOG000238577 InterPro:IPR005202
PROSITE:PS50985 EMBL:AF210731 EMBL:AY045833 EMBL:AY096626
EMBL:AY084492 EMBL:AF036300 IPI:IPI00538394 PIR:E86347 PIR:T51234
RefSeq:NP_173566.1 UniGene:At.14825 ProteinModelPortal:Q9SDQ3
STRING:Q9SDQ3 PaxDb:Q9SDQ3 PRIDE:Q9SDQ3 EnsemblPlants:AT1G21450.1
GeneID:838743 KEGG:ath:AT1G21450 GeneFarm:4232 TAIR:At1g21450
eggNOG:NOG324880 InParanoid:Q9SDQ3 OMA:SINDEWA PhylomeDB:Q9SDQ3
ProtClustDB:CLSN2913658 Genevestigator:Q9SDQ3 Uniprot:Q9SDQ3
Length = 593
Score = 417 (151.9 bits), Expect = 4.8e-39, P = 4.8e-39
Identities = 116/370 (31%), Positives = 193/370 (52%)
Query: 3 MLNELS---SPYGDTDQKLSSYFLQALFGRMTDSGERCYRTLSSASDKTCSFESTRKMVL 59
M+NEL S GD Q++++Y ++ L RM SG+ YR L S E M +
Sbjct: 244 MVNELRQIVSIQGDPSQRIAAYMVEGLAARMAASGKFIYRALKCKEPP--SDERLAAMQV 301
Query: 60 KFQEVSPWTTFGHVACNGAIMEAFEGESKLHIVDISNTYCTQWPTLLEALATRTDDTPHL 119
F EV P FG +A NGAI+EA +GE ++HI+D Q+ TL+ ++A P L
Sbjct: 302 LF-EVCPCFKFGFLAANGAILEAIKGEEEVHIIDFDINQGNQYMTLIRSIAELPGKRPRL 360
Query: 120 RLTTVVTSKPVXXXXXXXXXXVQKVMKEIGNRMEKFARLMGVPFEFNVIHHVGDLCDLNL 179
RLT + + V ++ IG R+E+ A GV F+F + + ++
Sbjct: 361 RLTGIDDPESVQRSIGG--------LRIIGLRLEQLAEDNGVSFKFKAMPSKTSI--VSP 410
Query: 180 AELDVRSDEALAINCIGALH-----TIAAVDDRRDVLISNLRSLQPRIITVVEEEVDLDV 234
+ L + E L +N LH ++ V+ +RD L+ ++SL P+++TVVE++V+ +
Sbjct: 411 STLGCKPGETLIVNFAFQLHHMPDESVTTVN-QRDELLHMVKSLNPKLVTVVEQDVNTNT 469
Query: 235 GIDGLEFVKGFQECLRWFRVYFESLDESFTKTSNERLMLERAA-GRAIVDLVACQPSEST 293
F F E ++ FESLD + + S ER+ +ER R IV++VAC+ E
Sbjct: 470 S----PFFPRFIEAYEYYSAVFESLDMTLPRESQERMNVERQCLARDIVNIVACEGEERI 525
Query: 294 ERRETATRWSGRLHGAGFSPFMFSDEVCDDVRALLRR-YKEGWSMAQCPDAG-IFLSWKD 351
ER E A +W R+ AGF+P S +V ++++ L+++ Y + + + + G + W++
Sbjct: 526 ERYEAAGKWRARMMMAGFNPKPMSAKVTNNIQNLIKQQYCNKYKLKE--EMGELHFCWEE 583
Query: 352 HTVVWASAWR 361
+++ ASAWR
Sbjct: 584 KSLIVASAWR 593
>TAIR|locus:2099624 [details] [associations]
symbol:RGL2 "RGA-like 2" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;TAS] [GO:0009740 "gibberellic acid mediated signaling
pathway" evidence=RCA;TAS] [GO:0010187 "negative regulation of seed
germination" evidence=IMP] [GO:0009938 "negative regulation of
gibberellic acid mediated signaling pathway" evidence=TAS]
[GO:0009651 "response to salt stress" evidence=IGI] [GO:0009723
"response to ethylene stimulus" evidence=IGI;RCA] [GO:0009737
"response to abscisic acid stimulus" evidence=IEP;IGI;RCA]
[GO:0042538 "hyperosmotic salinity response" evidence=IGI;RCA]
[GO:0010029 "regulation of seed germination" evidence=IGI]
[GO:2000033 "regulation of seed dormancy process" evidence=IGI]
[GO:0009739 "response to gibberellin stimulus" evidence=IEP]
[GO:2000377 "regulation of reactive oxygen species metabolic
process" evidence=IGI] [GO:0009863 "salicylic acid mediated
signaling pathway" evidence=IGI;RCA] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=IGI;RCA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009062 "fatty acid catabolic process"
evidence=RCA] [GO:0009686 "gibberellin biosynthetic process"
evidence=RCA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010325 "raffinose family oligosaccharide biosynthetic process"
evidence=RCA] [GO:0048444 "floral organ morphogenesis"
evidence=RCA] [GO:0048608 "reproductive structure development"
evidence=RCA] Pfam:PF03514 GO:GO:0009737 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0030154 GO:GO:0006952
GO:GO:0009723 GO:GO:0003700 GO:GO:0006351 GO:GO:0010187
GO:GO:0009908 GO:GO:0042538 EMBL:AC009895 GO:GO:2000377
GO:GO:0040029 GO:GO:0009867 GO:GO:0009863 GO:GO:0009740
eggNOG:NOG243696 HOGENOM:HOG000238577 KO:K14494 GO:GO:0009938
GO:GO:2000033 InterPro:IPR021914 InterPro:IPR005202 Pfam:PF12041
PROSITE:PS50985 EMBL:AK118009 IPI:IPI00521981 RefSeq:NP_186995.1
UniGene:At.18489 UniGene:At.67027 ProteinModelPortal:Q8GXW1
SMR:Q8GXW1 IntAct:Q8GXW1 STRING:Q8GXW1 EnsemblPlants:AT3G03450.1
GeneID:821251 KEGG:ath:AT3G03450 GeneFarm:4240 TAIR:At3g03450
InParanoid:Q8GXW1 OMA:MLSELNN PhylomeDB:Q8GXW1
ProtClustDB:CLSN2684085 Genevestigator:Q8GXW1 GermOnline:AT3G03450
Uniprot:Q8GXW1
Length = 547
Score = 397 (144.8 bits), Expect = 6.3e-37, P = 6.3e-37
Identities = 97/331 (29%), Positives = 168/331 (50%)
Query: 36 RCYRTLSSASDKTCSFESTRKMVLK--FQEVSPWTTFGHVACNGAIMEAFEGESKLHIVD 93
R YR ++ +D + + + VL+ F E P+ F H N AI+EA ++H++D
Sbjct: 231 RIYRDYTAETDVCAAVNPSFEEVLEMHFYESCPYLKFAHFTANQAILEAVTTARRVHVID 290
Query: 94 ISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTSKPVXXXXXXXXXXVQKVMKEIGNRME 153
+ QWP L++ALA R P RLT + P ++++G ++
Sbjct: 291 LGLNQGMQWPALMQALALRPGGPPSFRLTGI--GPPQTENSDS--------LQQLGWKLA 340
Query: 154 KFARLMGVPFEFNVIHHVGDLCDLNLAELDVRSD-EALAINCIGALHTIAAVDDRRDVLI 212
+FA+ MGV FEF + L DL + R + E L +N + LH + A + L+
Sbjct: 341 QFAQNMGVEFEFKGLA-AESLSDLEPEMFETRPESETLVVNSVFELHRLLARSGSIEKLL 399
Query: 213 SNLRSLQPRIITVVEEEVDLDVGIDGLEFVKGFQECLRWFRVYFESLDESFTKTSNERLM 272
+ +++++P I+TVVE+E + + G+ F+ F E L ++ F+SL++S++ S +R+M
Sbjct: 400 NTVKAIKPSIVTVVEQEANHN----GIVFLDRFNEALHYYSSLFDSLEDSYSLPSQDRVM 455
Query: 273 LERAAGRAIVDLVACQPSESTERRETATRWSGRLHGAGFSPFMFSDEVCDDVRALLRRYK 332
E GR I+++VA + S+ ER ETA +W R+ AGF P LL Y
Sbjct: 456 SEVYLGRQILNVVAAEGSDRVERHETAAQWRIRMKSAGFDPIHLGSSAFKQASMLLSLYA 515
Query: 333 --EGWSMAQCPDAGIFLSWKDHTVVWASAWR 361
+G+ + + D + + W+ ++ SAW+
Sbjct: 516 TGDGYRVEE-NDGCLMIGWQTRPLITTSAWK 545
Score = 238 (88.8 bits), Expect = 8.7e-18, P = 8.7e-18
Identities = 64/218 (29%), Positives = 109/218 (50%)
Query: 17 KLSSYFLQALFGRMTDSGERCYRTLSSASDKTCSFESTRKMVLK--FQEVSPWTTFGHVA 74
K+++YF QAL R YR ++ +D + + + VL+ F E P+ F H
Sbjct: 219 KVATYFAQAL-------ARRIYRDYTAETDVCAAVNPSFEEVLEMHFYESCPYLKFAHFT 271
Query: 75 CNGAIMEAFEGESKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTSKPVXXXX 134
N AI+EA ++H++D+ QWP L++ALA R P RLT + P
Sbjct: 272 ANQAILEAVTTARRVHVIDLGLNQGMQWPALMQALALRPGGPPSFRLTGI--GPPQTENS 329
Query: 135 XXXXXXVQKVMKEIGNRMEKFARLMGVPFEFNVIHHVGDLCDLNLAELDVRSD-EALAIN 193
++++G ++ +FA+ MGV FEF + L DL + R + E L +N
Sbjct: 330 DS--------LQQLGWKLAQFAQNMGVEFEFKGLA-AESLSDLEPEMFETRPESETLVVN 380
Query: 194 CIGALHTIAAVDDRRDVLISNLRSLQPRIITVVEEEVD 231
+ LH + A + L++ +++++P I+TVVE+E +
Sbjct: 381 SVFELHRLLARSGSIEKLLNTVKAIKPSIVTVVEQEAN 418
>TAIR|locus:2008086 [details] [associations]
symbol:SCL3 "AT1G50420" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0009739 "response to gibberellin
stimulus" evidence=IEP] Pfam:PF03514 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
GO:GO:0009739 EMBL:AC012561 HOGENOM:HOG000238577 InterPro:IPR005202
PROSITE:PS50985 EMBL:AY056154 EMBL:AY091260 EMBL:AF036301
IPI:IPI00539428 PIR:E96540 PIR:T51235 RefSeq:NP_175459.1
UniGene:At.14826 IntAct:Q9LPR8 STRING:Q9LPR8
EnsemblPlants:AT1G50420.1 GeneID:841464 KEGG:ath:AT1G50420
GeneFarm:4258 TAIR:At1g50420 eggNOG:NOG310008 InParanoid:Q9LPR8
OMA:MVHVIDL PhylomeDB:Q9LPR8 ProtClustDB:CLSN2913643
Genevestigator:Q9LPR8 Uniprot:Q9LPR8
Length = 482
Score = 269 (99.8 bits), Expect = 1.4e-36, Sum P(2) = 1.4e-36
Identities = 66/203 (32%), Positives = 112/203 (55%)
Query: 4 LNELSSPYGDTDQKLSSYFLQALFGRMTDSGERCYRTLSSASDKTCSFESTRKMVLKFQE 63
L+ L+SP GDT Q++++YF +AL R+ S Y+ L++ +T + + F E
Sbjct: 80 LSHLASPDGDTMQRIAAYFTEALANRILKSWPGLYKALNATQTRTNNVSEEIHVRRLFFE 139
Query: 64 VSPWTTFGHVACNGAIMEAFEGESKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTT 123
+ P ++ N AI+EA EGE +H++D+ + QW LL+A +R + PHLR+T
Sbjct: 140 MFPILKVSYLLTNRAILEAMEGEKMVHVIDLDASEPAQWLALLQAFNSRPEGPPHLRITG 199
Query: 124 VVTSKPVXXXXXXXXXXVQKVMKEIGNRMEKFARLMGVPFEFNVIHHVGDLCDLNLAELD 183
V K +V++++ +R+ + A + +PF+FN + V L LN+ +L
Sbjct: 200 VHHQK--------------EVLEQMAHRLIEEAEKLDIPFQFNPV--VSRLDCLNVEQLR 243
Query: 184 VRSDEALAINCIGALHTIAAVDD 206
V++ EALA++ + LHT A DD
Sbjct: 244 VKTGEALAVSSVLQLHTFLASDD 266
Score = 151 (58.2 bits), Expect = 1.4e-36, Sum P(2) = 1.4e-36
Identities = 40/157 (25%), Positives = 75/157 (47%)
Query: 207 RRDVLISNLRSLQPRIITVVEEEVDLDVGIDGLEFVKGFQECLRWFRVYFESLDESFTKT 266
R D ++ + L P+++ V E++ D + G ++ E L + F+ L+ +T
Sbjct: 328 RTDSFLNAIWGLSPKVMVVTEQDSDHN----GSTLMERLLESLYTYAALFDCLETKVPRT 383
Query: 267 SNERLMLERAA-GRAIVDLVACQPSESTERRETATRWSGRLHGAGFSPFMFSDEVCDDVR 325
S +R+ +E+ G I ++++C+ E ER E +WS R+ AGF S R
Sbjct: 384 SQDRIKVEKMLFGEEIKNIISCEGFERRERHEKLEKWSQRIDLAGFGNVPLSYYAMLQAR 443
Query: 326 ALLRRYK-EGWSMAQCPDAGIFLSWKDHTVVWASAWR 361
LL+ +G+ + + + + W+D + SAWR
Sbjct: 444 RLLQGCGFDGYRIKEESGCAV-ICWQDRPLYSVSAWR 479
>TAIR|locus:2006747 [details] [associations]
symbol:GAI "GIBBERELLIC ACID INSENSITIVE" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;ISS;IDA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;TAS]
[GO:0009740 "gibberellic acid mediated signaling pathway"
evidence=RCA;TAS] [GO:0009938 "negative regulation of gibberellic
acid mediated signaling pathway" evidence=IMP;TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0010233 "phloem transport"
evidence=IMP] [GO:0009651 "response to salt stress" evidence=IGI]
[GO:0009723 "response to ethylene stimulus" evidence=IGI;RCA]
[GO:0009737 "response to abscisic acid stimulus" evidence=IGI;RCA]
[GO:0042538 "hyperosmotic salinity response" evidence=IGI;RCA]
[GO:0010029 "regulation of seed germination" evidence=IGI]
[GO:2000033 "regulation of seed dormancy process" evidence=IGI]
[GO:0009739 "response to gibberellin stimulus" evidence=IEP]
[GO:0010187 "negative regulation of seed germination" evidence=IGI]
[GO:0010218 "response to far red light" evidence=IEP] [GO:2000377
"regulation of reactive oxygen species metabolic process"
evidence=IGI] [GO:0009863 "salicylic acid mediated signaling
pathway" evidence=IGI;RCA] [GO:0009867 "jasmonic acid mediated
signaling pathway" evidence=IGI;RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010325 "raffinose family oligosaccharide biosynthetic process"
evidence=RCA] [GO:0048444 "floral organ morphogenesis"
evidence=RCA] [GO:0006808 "regulation of nitrogen utilization"
evidence=IMP] Pfam:PF03514 GO:GO:0007275 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009737 GO:GO:0005634 GO:GO:0009723
GO:GO:0003700 GO:GO:0006351 GO:GO:0010218 GO:GO:0010187
GO:GO:0006808 GO:GO:0042538 GO:GO:2000377 EMBL:AC006917
GO:GO:0010233 GO:GO:0040029 GO:GO:0009867 GO:GO:0009863
GO:GO:0009740 EMBL:Y11337 EMBL:Y15193 EMBL:AY058194 EMBL:AY142002
IPI:IPI00535232 PIR:H86282 RefSeq:NP_172945.1 UniGene:At.15032
UniGene:At.75604 PDB:2ZSH PDB:2ZSI PDBsum:2ZSH PDBsum:2ZSI
ProteinModelPortal:Q9LQT8 SMR:Q9LQT8 DIP:DIP-32985N IntAct:Q9LQT8
STRING:Q9LQT8 EnsemblPlants:AT1G14920.1 GeneID:838057
KEGG:ath:AT1G14920 GeneFarm:4235 TAIR:At1g14920 eggNOG:NOG243696
HOGENOM:HOG000238577 InParanoid:Q9LQT8 KO:K14494 OMA:RRVYRFR
PhylomeDB:Q9LQT8 ProtClustDB:CLSN2682993 EvolutionaryTrace:Q9LQT8
Genevestigator:Q9LQT8 GermOnline:AT1G14920 GO:GO:0009938
GO:GO:2000033 InterPro:IPR021914 InterPro:IPR005202 Pfam:PF12041
PROSITE:PS50985 Uniprot:Q9LQT8
Length = 533
Score = 360 (131.8 bits), Expect = 7.1e-33, P = 7.1e-33
Identities = 100/350 (28%), Positives = 165/350 (47%)
Query: 16 QKLSSYFLQALFGRMTDSGERCYRTLSSASDKTCSFESTRKMVLKFQEVSPWTTFGHVAC 75
+K+++YF +AL R YR S S S T +M F E P+ F H
Sbjct: 207 RKVATYFAEAL-------ARRIYRLSPSQSPIDHSLSDTLQM--HFYETCPYLKFAHFTA 257
Query: 76 NGAIMEAFEGESKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTSKPVXXXXX 135
N AI+EAF+G+ ++H++D S + QWP L++ALA R P RLT + P
Sbjct: 258 NQAILEAFQGKKRVHVIDFSMSQGLQWPALMQALALRPGGPPVFRLTGIGPPAPDNFDY- 316
Query: 136 XXXXXVQKVMKEIGNRMEKFARLMGVPFEFN--VIHHVGDLCDLNLAELDVRSDEALAIN 193
+ E+G ++ A + V FE+ V + + DL D ++ EL E++A+N
Sbjct: 317 ---------LHEVGCKLAHLAEAIHVEFEYRGFVANTLADL-DASMLELRPSEIESVAVN 366
Query: 194 CIGALHTIAAVDDRRDVLISNLRSLQPRIITVVEEEVDLDVGIDGLEFVKGFQECLRWFR 253
+ LH + D ++ + ++P I TVVE+E + + I F+ F E L ++
Sbjct: 367 SVFELHKLLGRPGAIDKVLGVVNQIKPEIFTVVEQESNHNSPI----FLDRFTESLHYYS 422
Query: 254 VYFESLDESFTKTSNERLMLERAAGRAIVDLVACQPSESTERRETATRWSGRLHGAGFSP 313
F+SL+ + +++M E G+ I ++VAC + ER ET ++W R AGF+
Sbjct: 423 TLFDSLEG--VPSGQDKVMSEVYLGKQICNVVACDGPDRVERHETLSQWRNRFGSAGFAA 480
Query: 314 FMFSDEVCDDVRALLRRYK--EGWSMAQCPDAGIFLSWKDHTVVWASAWR 361
LL + EG+ + + D + L W ++ SAW+
Sbjct: 481 AHIGSNAFKQASMLLALFNGGEGYRVEES-DGCLMLGWHTRPLIATSAWK 529
>TAIR|locus:2005516 [details] [associations]
symbol:RGA1 "REPRESSOR OF GA1-3 1" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS;IDA;TAS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=TAS] [GO:0009740
"gibberellic acid mediated signaling pathway" evidence=RCA;TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009651 "response
to salt stress" evidence=IGI;RCA] [GO:0009723 "response to ethylene
stimulus" evidence=IGI;RCA] [GO:0009737 "response to abscisic acid
stimulus" evidence=IGI;RCA] [GO:0042538 "hyperosmotic salinity
response" evidence=IGI;RCA] [GO:0010029 "regulation of seed
germination" evidence=IGI] [GO:2000033 "regulation of seed dormancy
process" evidence=IGI] [GO:0010187 "negative regulation of seed
germination" evidence=IGI] [GO:0010218 "response to far red light"
evidence=IEP] [GO:2000377 "regulation of reactive oxygen species
metabolic process" evidence=IGI] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=IGI;RCA] [GO:0042176
"regulation of protein catabolic process" evidence=IMP] [GO:0006096
"glycolysis" evidence=RCA] [GO:0006833 "water transport"
evidence=RCA] [GO:0006972 "hyperosmotic response" evidence=RCA]
[GO:0007030 "Golgi organization" evidence=RCA] [GO:0009266
"response to temperature stimulus" evidence=RCA] [GO:0009733
"response to auxin stimulus" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009863 "salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010325 "raffinose family
oligosaccharide biosynthetic process" evidence=RCA] [GO:0032880
"regulation of protein localization" evidence=RCA] [GO:0042744
"hydrogen peroxide catabolic process" evidence=RCA] [GO:0046686
"response to cadmium ion" evidence=RCA] [GO:0048444 "floral organ
morphogenesis" evidence=RCA] [GO:0009938 "negative regulation of
gibberellic acid mediated signaling pathway" evidence=IGI]
Pfam:PF03514 GO:GO:0007275 GO:GO:0009737 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009723 GO:GO:0003700
GO:GO:0006351 GO:GO:0010218 GO:GO:0010187 GO:GO:0042176
GO:GO:0042538 EMBL:AC005560 GO:GO:2000377 GO:GO:0040029
GO:GO:0009867 GO:GO:0009740 eggNOG:NOG243696 HOGENOM:HOG000238577
KO:K14494 ProtClustDB:CLSN2682993 GO:GO:0009938 GO:GO:2000033
InterPro:IPR021914 InterPro:IPR005202 Pfam:PF12041 PROSITE:PS50985
EMBL:Y11336 EMBL:Y15194 EMBL:AY052239 EMBL:AY054160 EMBL:BT010467
IPI:IPI00523272 PIR:D84426 RefSeq:NP_178266.1 UniGene:At.24012
ProteinModelPortal:Q9SLH3 SMR:Q9SLH3 IntAct:Q9SLH3 STRING:Q9SLH3
PRIDE:Q9SLH3 EnsemblPlants:AT2G01570.1 GeneID:814686
KEGG:ath:AT2G01570 GeneFarm:4238 TAIR:At2g01570 InParanoid:Q9SLH3
OMA:VHALMAC PhylomeDB:Q9SLH3 Genevestigator:Q9SLH3
GermOnline:AT2G01570 Uniprot:Q9SLH3
Length = 587
Score = 357 (130.7 bits), Expect = 3.4e-32, P = 3.4e-32
Identities = 98/349 (28%), Positives = 161/349 (46%)
Query: 16 QKLSSYFLQALFGRMTDSGERCYRTLSSASDKTCSFESTRKMVLKFQEVSPWTTFGHVAC 75
+K+++YF +AL R YR + T +M F E P+ F H
Sbjct: 259 RKVATYFAEAL-------ARRIYRLSPPQNQIDHCLSDTLQM--HFYETCPYLKFAHFTA 309
Query: 76 NGAIMEAFEGESKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTSKPVXXXXX 135
N AI+EAFEG+ ++H++D S QWP L++ALA R P RLT + P
Sbjct: 310 NQAILEAFEGKKRVHVIDFSMNQGLQWPALMQALALREGGPPTFRLTGIGPPAPDNSDH- 368
Query: 136 XXXXXVQKVMKEIGNRMEKFARLMGVPFEFN--VIHHVGDLCDLNLAELDVRSDEALAIN 193
+ E+G ++ + A + V FE+ V + + DL D ++ EL EA+A+N
Sbjct: 369 ---------LHEVGCKLAQLAEAIHVEFEYRGFVANSLADL-DASMLELRPSDTEAVAVN 418
Query: 194 CIGALHTIAAVDDRRDVLISNLRSLQPRIITVVEEEVDLDVGIDGLEFVKGFQECLRWFR 253
+ LH + + ++ ++ ++P I TVVE+E + + G F+ F E L ++
Sbjct: 419 SVFELHKLLGRPGGIEKVLGVVKQIKPVIFTVVEQESNHN----GPVFLDRFTESLHYYS 474
Query: 254 VYFESLDESFTKTSNERLMLERAAGRAIVDLVACQPSESTERRETATRWSGRLHGAGFSP 313
F+SL+ S +++M E G+ I +LVAC+ + ER ET ++W R +G +P
Sbjct: 475 TLFDSLEG--VPNSQDKVMSEVYLGKQICNLVACEGPDRVERHETLSQWGNRFGSSGLAP 532
Query: 314 FMFSDEVCDDVRALLRRYKEGWSMAQCPDAG-IFLSWKDHTVVWASAWR 361
LL + G G + L W ++ SAW+
Sbjct: 533 AHLGSNAFKQASMLLSVFNSGQGYRVEESNGCLMLGWHTRPLITTSAWK 581
>TAIR|locus:2157477 [details] [associations]
symbol:RGL3 "RGA-like protein 3" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS;TAS] [GO:0009739 "response to gibberellin
stimulus" evidence=IEP;ISS] [GO:0009740 "gibberellic acid mediated
signaling pathway" evidence=RCA;TAS] [GO:0009686 "gibberellin
biosynthetic process" evidence=RCA] [GO:0009694 "jasmonic acid
metabolic process" evidence=RCA] [GO:0009723 "response to ethylene
stimulus" evidence=RCA] [GO:0009737 "response to abscisic acid
stimulus" evidence=RCA] [GO:0009753 "response to jasmonic acid
stimulus" evidence=RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0009863 "salicylic acid mediated signaling
pathway" evidence=RCA] [GO:0009867 "jasmonic acid mediated
signaling pathway" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010325 "raffinose family
oligosaccharide biosynthetic process" evidence=RCA] [GO:0042538
"hyperosmotic salinity response" evidence=RCA] [GO:0048444 "floral
organ morphogenesis" evidence=RCA] Pfam:PF03514 GO:GO:0007275
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003700
GO:GO:0006351 GO:GO:0040029 EMBL:AL391150 GO:GO:0009740
HOGENOM:HOG000238577 KO:K14494 InterPro:IPR021914
InterPro:IPR005202 Pfam:PF12041 PROSITE:PS50985
ProtClustDB:CLSN2684085 EMBL:AK117226 EMBL:BT005905 IPI:IPI00544591
PIR:T51475 RefSeq:NP_197251.1 UniGene:At.31541
ProteinModelPortal:Q9LF53 SMR:Q9LF53 PaxDb:Q9LF53 PRIDE:Q9LF53
EnsemblPlants:AT5G17490.1 GeneID:831615 KEGG:ath:AT5G17490
GeneFarm:4241 TAIR:At5g17490 eggNOG:NOG300920 InParanoid:Q9LF53
OMA:RRIYRIH PhylomeDB:Q9LF53 Genevestigator:Q9LF53
GermOnline:AT5G17490 Uniprot:Q9LF53
Length = 523
Score = 348 (127.6 bits), Expect = 1.5e-31, P = 1.5e-31
Identities = 88/306 (28%), Positives = 155/306 (50%)
Query: 59 LKFQEVSPWTTFGHVACNGAIMEAFEGESKLHIVDISNTYCTQWPTLLEALATRTDDTPH 118
+ F + P+ F H N AI+EA +H++D+ QWP L++ALA R P
Sbjct: 229 MNFYDSCPYLKFAHFTANQAILEAVTTSRVVHVIDLGLNQGMQWPALMQALALRPGGPPS 288
Query: 119 LRLTTVVTSKPVXXXXXXXXXXVQKVMKEIGNRMEKFARLMGVPFEFNVIHHVGDLCDLN 178
RLT V P ++ ++E+G ++ + A+ +GV F+FN + L DL
Sbjct: 289 FRLTGV--GNPSN----------REGIQELGWKLAQLAQAIGVEFKFNGLT-TERLSDLE 335
Query: 179 LAELDVRSD-EALAINCIGALHTIAAVDDRRDVLISNLRSLQPRIITVVEEEVDLDVGID 237
+ R++ E L +N + LH + + + L++ +++++P ++TVVE+E + +
Sbjct: 336 PDMFETRTESETLVVNSVFELHPVLSQPGSIEKLLATVKAVKPGLVTVVEQEANHN---- 391
Query: 238 GLEFVKGFQECLRWFRVYFESLDESFTKTSNERLMLERAAGRAIVDLVACQPSESTERRE 297
G F+ F E L ++ F+SL++ S +R+M E GR I++LVA + S+ ER E
Sbjct: 392 GDVFLDRFNEALHYYSSLFDSLEDGVVIPSQDRVMSEVYLGRQILNLVATEGSDRIERHE 451
Query: 298 TATRWSGRLHGAGFSPFMFSDEVCDDVRALLRRYK--EGWSMAQCPDAGIFLSWKDHTVV 355
T +W R+ AGF P + LL +G+ + + D + L+W+ ++
Sbjct: 452 TLAQWRKRMGSAGFDPVNLGSDAFKQASLLLALSGGGDGYRVEE-NDGSLMLAWQTKPLI 510
Query: 356 WASAWR 361
ASAW+
Sbjct: 511 AASAWK 516
>TAIR|locus:2174974 [details] [associations]
symbol:AT5G66770 "AT5G66770" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003700 GO:GO:0006351 EMBL:AB010700
InterPro:IPR005202 PROSITE:PS50985 EMBL:AY062538 EMBL:BT002580
IPI:IPI00537848 RefSeq:NP_201478.1 UniGene:At.27307
ProteinModelPortal:Q9FL03 IntAct:Q9FL03 PRIDE:Q9FL03
EnsemblPlants:AT5G66770.1 GeneID:836810 KEGG:ath:AT5G66770
GeneFarm:4249 TAIR:At5g66770 eggNOG:NOG324692 HOGENOM:HOG000240374
InParanoid:Q9FL03 OMA:DASCSAP PhylomeDB:Q9FL03
ProtClustDB:CLSN2684429 Genevestigator:Q9FL03 Uniprot:Q9FL03
Length = 584
Score = 348 (127.6 bits), Expect = 3.3e-31, P = 3.3e-31
Identities = 106/367 (28%), Positives = 178/367 (48%)
Query: 4 LNELSSPYGDTDQKLSSYFLQALFGRMTDSGERCYRTLSSASDKTCSFESTRKMVLKFQE 63
+ E S GD ++++ YF +AL R++ + + SS D S+++ +
Sbjct: 242 IRESVSELGDPTERVAFYFTEALSNRLSPNSPATSSSSSSTEDLILSYKT-------LND 294
Query: 64 VSPWTTFGHVACNGAIMEAFEGESKLHIVDISNTYCTQWPTLLEALATRTDDTP-HLRLT 122
P++ F H+ N AI+EA E +K+HIVD QWP LL+ALATRT P +R++
Sbjct: 295 ACPYSKFAHLTANQAILEATEKSNKIHIVDFGIVQGIQWPALLQALATRTSGKPTQIRVS 354
Query: 123 TVVTSKPVXXXXXXXXXXVQKVMKEIGNRMEKFARLMGVPFEFNVIHHVGDLCDLNLAEL 182
+ P + + GNR+ FA+++ + F+F I + + LN +
Sbjct: 355 GIPA--P------SLGESPEPSLIATGNRLRDFAKVLDLNFDFIPI--LTPIHLLNGSSF 404
Query: 183 DVRSDEALAINCIGALHTIAAVDDRRDVLISNLR---SLQPRIITVVEEEVDLD-VGIDG 238
V DE LA+N + L+ + +D+ ++ + LR SL PR++T+ E EV L+ VG
Sbjct: 405 RVDPDEVLAVNFMLQLYKL--LDETPTIVDTALRLAKSLNPRVVTLGEYEVSLNRVG--- 459
Query: 239 LEFVKGFQECLRWFRVYFESLDESFTKTSNERLMLERAA-GRAIVDLVACQPSE-STERR 296
F + L+++ FESL+ + + S ER+ +ER GR I L+ + + ER
Sbjct: 460 --FANRVKNALQFYSAVFESLEPNLGRDSEERVRVERELFGRRISGLIGPEKTGIHRERM 517
Query: 297 ETATRWSGRLHGAGFSPFMFSDEVCDDVRALLRRYKEG--WSMAQCPDAGIFLSWKDHTV 354
E +W + AGF S+ + LL Y +S+ + I L+W D +
Sbjct: 518 EEKEQWRVLMENAGFESVKLSNYAVSQAKILLWNYNYSNLYSIVESKPGFISLAWNDLPL 577
Query: 355 VWASAWR 361
+ S+WR
Sbjct: 578 LTLSSWR 584
>TAIR|locus:2044973 [details] [associations]
symbol:SCL21 "AT2G04890" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006487 "protein N-linked glycosylation" evidence=RCA]
Pfam:PF03514 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003700 GO:GO:0006351 EMBL:AC006955 EMBL:AC007211
HOGENOM:HOG000238577 InterPro:IPR005202 PROSITE:PS50985
EMBL:AF210732 EMBL:AK175210 EMBL:AK175990 EMBL:AK176099
EMBL:AK221099 EMBL:BT026455 IPI:IPI00534889 PIR:G84462
RefSeq:NP_178566.1 UniGene:At.48419 UniGene:At.71110 IntAct:Q9S7H5
EnsemblPlants:AT2G04890.1 GeneID:815036 KEGG:ath:AT2G04890
GeneFarm:4231 TAIR:At2g04890 eggNOG:NOG292869 InParanoid:Q9S7H5
OMA:HKERINI PhylomeDB:Q9S7H5 ProtClustDB:CLSN2912915
Genevestigator:Q9S7H5 Uniprot:Q9S7H5
Length = 413
Score = 339 (124.4 bits), Expect = 8.8e-31, P = 8.8e-31
Identities = 71/223 (31%), Positives = 122/223 (54%)
Query: 144 VMKEIGNRMEKFARLMGVPFEFNVIHHVGDLCDLNLAELDVRSDEALAINCIGALHTI-- 201
V+ + R+EK A+ VPF FN + C++ + LDVR EAL +N LH +
Sbjct: 198 VLVTVKKRLEKLAKKFDVPFRFNAVSRPS--CEVEVENLDVRDGEALGVNFAYMLHHLPD 255
Query: 202 --AAVDDRRDVLISNLRSLQPRIITVVEEEVDLDVGIDGLEFVKGFQECLRWFRVYFESL 259
++++ RD L+ ++SL P+++T+VE+E + + F+ F E L ++ FES+
Sbjct: 256 ESVSMENHRDRLLRMVKSLSPKVVTLVEQECNTNTS----PFLPRFLETLSYYTAMFESI 311
Query: 260 DESFTKTSNERLMLER-AAGRAIVDLVACQPSESTERRETATRWSGRLHGAGFSPFMFSD 318
D + ER+ +E+ R +V+++AC+ +E ER E +W R AGF P+ S
Sbjct: 312 DVMLPRNHKERINIEQHCMARDVVNIIACEGAERIERHELLGKWKSRFSMAGFEPYPLSS 371
Query: 319 EVCDDVRALLRRYKEGWSMAQCPDAGIFLSWKDHTVVWASAWR 361
+ +RALLR Y G+++ + D ++L W D +V + AW+
Sbjct: 372 IISATIRALLRDYSNGYAIEE-RDGALYLGWMDRILVSSCAWK 413
Score = 339 (124.4 bits), Expect = 8.8e-31, P = 8.8e-31
Identities = 94/343 (27%), Positives = 161/343 (46%)
Query: 2 WMLNELS---SPYGDTDQKLSSYFLQALFGRMTDSGERCYRTLSSASDKTCSFESTRKMV 58
W + EL S G+ Q+L +Y L+ L R+ SG Y++L S ++ F S V
Sbjct: 71 WCMGELRGMVSISGEPIQRLGAYMLEGLVARLAASGSSIYKSLQSREPESYEFLS---YV 127
Query: 59 LKFQEVSPWTTFGHVACNGAIMEAFEGESKLHIVDISNTYCTQWPTLLEALATRTDDTPH 118
EV P+ FG+++ NGAI EA + E ++HI+D +QW L++A A R P+
Sbjct: 128 YVLHEVCPYFKFGYMSANGAIAEAMKDEERIHIIDFQIGQGSQWIALIQAFAARPGGAPN 187
Query: 119 LRLTTVVTSKPVXXXXXXXXXXVQKVMKEIGNRMEKFARLMGVPFEFNVIHHVGDLCDL- 177
+R+T V V+ + R+EK A+ VPF FN + ++
Sbjct: 188 IRITGVGDGS---------------VLVTVKKRLEKLAKKFDVPFRFNAVSRPSCEVEVE 232
Query: 178 NLAELDVRSDEALAINCIGAL-HTIAAVDDRRDVLISNLRSLQPRIITVVEEEVDLDVGI 236
NL D + + L ++++ RD L+ ++SL P+++T+VE+E + +
Sbjct: 233 NLDVRDGEALGVNFAYMLHHLPDESVSMENHRDRLLRMVKSLSPKVVTLVEQECNTNTSP 292
Query: 237 DGLEFVKGFQECLRWFRVYFESLDESFTKTSNERLMLERAAGRAIVDLVACQPSESTERR 296
F++ F L + + N + + R +V+++AC+ +E ER
Sbjct: 293 FLPRFLETLSYYTAMFESIDVMLPRNHKERIN---IEQHCMARDVVNIIACEGAERIERH 349
Query: 297 ETATRWSGRLHGAGFSPFMFSDEVCDDVRALLRRYKEGWSMAQ 339
E +W R AGF P+ S + +RALLR Y G+++ +
Sbjct: 350 ELLGKWKSRFSMAGFEPYPLSSIISATIRALLRDYSNGYAIEE 392
>TAIR|locus:2020487 [details] [associations]
symbol:LAS "AT1G55580" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0010223 "secondary shoot formation" evidence=IMP]
Pfam:PF03514 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003700 GO:GO:0006351 EMBL:AC002328 GO:GO:0010223
HOGENOM:HOG000238577 InterPro:IPR005202 PROSITE:PS50985
eggNOG:NOG323432 EMBL:AY196482 EMBL:BT026519 EMBL:EF598379
EMBL:EF598380 EMBL:EF598381 EMBL:EF598382 EMBL:EF598383
EMBL:EF598384 EMBL:EF598385 EMBL:EF598386 EMBL:EF598387
EMBL:EF598388 EMBL:EF598389 EMBL:EF598390 EMBL:EF598391
EMBL:EF598392 EMBL:EF598393 EMBL:EF598394 EMBL:EF598395
EMBL:EF598396 EMBL:EF598397 EMBL:EF598398 EMBL:EF598399
EMBL:EF598400 EMBL:EF598401 EMBL:EF598402 IPI:IPI00532485
RefSeq:NP_175954.1 UniGene:At.45199 STRING:Q9ZWC5
EnsemblPlants:AT1G55580.1 GeneID:842007 KEGG:ath:AT1G55580
GeneFarm:4247 TAIR:At1g55580 InParanoid:Q9ZWC5 OMA:EREANHG
PhylomeDB:Q9ZWC5 ProtClustDB:CLSN2682663 Genevestigator:Q9ZWC5
Uniprot:Q9ZWC5
Length = 445
Score = 305 (112.4 bits), Expect = 1.3e-30, Sum P(2) = 1.3e-30
Identities = 97/335 (28%), Positives = 160/335 (47%)
Query: 38 YRTLSSASDKTCSFESTRKMVLKFQEVSPWTTFGHVACNGAIMEAFEGESK--LHIVDIS 95
+RT ++ SD FES + L +++P+ FGH+ N AI++A E LHI+D+
Sbjct: 132 FRTKNNNSD----FESCYYLWLN--QLTPFIRFGHLTANQAILDATETNDNGALHILDLD 185
Query: 96 NTYCTQWPTLLEALATRTDDTPHLRLTTVVTSKPVXXXXXXXXXXVQKVMKEIGNRMEKF 155
+ QWP L++ALA R+ + P +S P V + G+R+ +F
Sbjct: 186 ISQGLQWPPLMQALAERSSN-P--------SSPPPSLRITGCGRDVTG-LNRTGDRLTRF 235
Query: 156 ARLMGVPFEFNVIHHV-----GDLCDLNLAELDVRSDEALAINCIGALHTIAAVD-DRRD 209
A +G+ F+F+ + V G L + L L E +A+NC+ LH I D D
Sbjct: 236 ADSLGLQFQFHTLVIVEEDLAGLLLQIRLLALSAVQGETIAVNCVHFLHKIFNDDGDMIG 295
Query: 210 VLISNLRSLQPRIITVVEEEVDLDVGIDGLEFVKGFQECLRWFRVYFESLDESFTKTSNE 269
+S ++SL RI+T+ E E + D F+ F E + + F+SL+ + S E
Sbjct: 296 HFLSAIKSLNSRIVTMAEREANHG---DH-SFLNRFSEAVDHYMAIFDSLEATLPPNSRE 351
Query: 270 RLMLE-RAAGRAIVDLVACQPSESTERRETATRWSGRLHGAGFSPFMFSDEVCDDVRALL 328
RL LE R G+ I+D+VA + +E +R W + GF + LL
Sbjct: 352 RLTLEQRWFGKEILDVVAAEETERKQRHRRFEIWEEMMKRFGFVNVPIGSFALSQAKLLL 411
Query: 329 RRY--KEGWSMAQCPDAGIFLSWKDHTVVWASAWR 361
R + EG+++ Q + +FL W++ + S+W+
Sbjct: 412 RLHYPSEGYNL-QFLNNSLFLGWQNRPLFSVSSWK 445
Score = 48 (22.0 bits), Expect = 1.3e-30, Sum P(2) = 1.3e-30
Identities = 10/23 (43%), Positives = 16/23 (69%)
Query: 8 SSPYGDTDQKLSSYFLQALFGRM 30
SSP+GD+ ++L F +AL R+
Sbjct: 71 SSPHGDSTERLVHLFTKALSVRI 93
>TAIR|locus:2025022 [details] [associations]
symbol:SCL14 "SCARECROW-like 14" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0005829 "cytosol" evidence=IDA]
[GO:0009410 "response to xenobiotic stimulus" evidence=IMP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IMP] [GO:0000956 "nuclear-transcribed mRNA catabolic
process" evidence=RCA] [GO:0006486 "protein glycosylation"
evidence=RCA] Pfam:PF03514 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005829 GO:GO:0005634 GO:GO:0045893 GO:GO:0003700
GO:GO:0006351 GO:GO:0009410 EMBL:AC022464 InterPro:IPR005202
PROSITE:PS50985 HOGENOM:HOG000238576 EMBL:AF036309 IPI:IPI00525012
PIR:T51232 RefSeq:NP_172233.1 UniGene:At.21921 STRING:Q9XE58
PaxDb:Q9XE58 PRIDE:Q9XE58 EnsemblPlants:AT1G07530.1 GeneID:837267
KEGG:ath:AT1G07530 GeneFarm:4250 TAIR:At1g07530 eggNOG:NOG319005
OMA:HEDFVVD PhylomeDB:Q9XE58 Genevestigator:Q9XE58 Uniprot:Q9XE58
Length = 769
Score = 325 (119.5 bits), Expect = 2.6e-28, P = 2.6e-28
Identities = 96/366 (26%), Positives = 163/366 (44%)
Query: 4 LNELSSPYGDTDQKLSSYFLQALFGRMTDSGERCYRTLSSASDKTCSFESTRKMVLKFQE 63
+ E SSP G+ ++L+ YF +L R+ +G + Y LSS K S K +
Sbjct: 419 IREHSSPLGNGSERLAHYFANSLEARLAGTGTQIYTALSS---KKTSAADMLKAYQTYMS 475
Query: 64 VSPWTTFGHVACNGAIMEAFEGESKLHIVDISNTYCTQWPTLLEALA-TRTDDTPHLRLT 122
V P+ + N ++M + +HI+D +Y QWP L+ L+ +R +P LR+T
Sbjct: 476 VCPFKKAAIIFANHSMMRFTANANTIHIIDFGISYGFQWPALIHRLSLSRPGGSPKLRIT 535
Query: 123 TVVTSKPVXXXXXXXXXXVQKVMKEIGNRMEKFARLMGVPFEFNVIHHVGDLCDLNLAEL 182
+ + VQ E G+R+ ++ + VPFE+N I + + + +L
Sbjct: 536 GIELPQ----RGFRPAEGVQ----ETGHRLARYCQRHNVPFEYNAIAQKWET--IQVEDL 585
Query: 183 DVRSDEALAINCI----GALHTIAAVDDRRDVLISNLRSLQPRIITVVEEEVDLDVGIDG 238
+R E + +N + L V+ RD ++ +R + P + L +
Sbjct: 586 KLRQGEYVVVNSLFRFRNLLDETVLVNSPRDAVLKLIRKINPNVFI----PAILSGNYNA 641
Query: 239 LEFVKGFQECLRWFRVYFESLDESFTKTSNERLMLERAA-GRAIVDLVACQPSESTERRE 297
FV F+E L + F+ D + RLM E+ GR IV++VAC+ +E ER E
Sbjct: 642 PFFVTRFREALFHYSAVFDMCDSKLAREDEMRLMYEKEFYGREIVNVVACEGTERVERPE 701
Query: 298 TATRWSGRLHGAGFSPFMFSDEVCDDVRALLRR-YKEGWSMAQCPDAGIFLSWKDHTVVW 356
T +W RL AGF E+ +++ + Y + + + Q + + WK V
Sbjct: 702 TYKQWQARLIRAGFRQLPLEKELMQNLKLKIENGYDKNFDVDQNGN-WLLQGWKGRIVYA 760
Query: 357 ASAWRP 362
+S W P
Sbjct: 761 SSLWVP 766
>TAIR|locus:2101694 [details] [associations]
symbol:AT3G50650 "AT3G50650" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003700 GO:GO:0006351 EMBL:AL132979
InterPro:IPR005202 PROSITE:PS50985 HOGENOM:HOG000240374
ProtClustDB:CLSN2684429 EMBL:AK229252 EMBL:AF036304 IPI:IPI00542878
PIR:T46142 PIR:T51238 RefSeq:NP_190634.1 UniGene:At.42939
PaxDb:Q9SCR0 PRIDE:Q9SCR0 EnsemblPlants:AT3G50650.1 GeneID:824228
KEGG:ath:AT3G50650 GeneFarm:4248 TAIR:At3g50650 eggNOG:NOG329237
InParanoid:Q9SCR0 OMA:LIRIKES PhylomeDB:Q9SCR0
Genevestigator:Q9SCR0 Uniprot:Q9SCR0
Length = 542
Score = 315 (115.9 bits), Expect = 1.1e-27, P = 1.1e-27
Identities = 107/370 (28%), Positives = 170/370 (45%)
Query: 4 LNELSSPYGDTDQKLSSYFLQALFGRMTDSGERCYRTLSSASDKTCSFESTRKMVLKFQE 63
+ E S GD Q++ YF +AL + T+S + SS D S+++ +
Sbjct: 198 IKESVSESGDPIQRVGYYFAEALSHKETESPSSS--SSSSLEDFILSYKT-------LND 248
Query: 64 VSPWTTFGHVACNGAIMEAFEGESKLHIVDISNTYCTQWPTLLEALATRTDDTP-HLRLT 122
P++ F H+ N AI+EA + +HIVD QW LL+ALATR+ P +R++
Sbjct: 249 ACPYSKFAHLTANQAILEATNQSNNIHIVDFGIFQGIQWSALLQALATRSSGKPTRIRIS 308
Query: 123 TVVTSKPVXXXXXXXXXXVQKVMKEIGNRMEKFARLMGVPFEFNVIHHVGDLCDLNLAEL 182
+ P + GNR+ FA ++ + FEF + L LN +
Sbjct: 309 GI----PAPSLGDSPGPSLIAT----GNRLRDFAAILDLNFEFYPVLTPIQL--LNGSSF 358
Query: 183 DVRSDEALAINCIGALHTIAAVDDRRDVLISNLR---SLQPRIITVVEEEVDLDVGIDGL 239
V DE L +N + L+ + +D+ + + LR SL PRI+T+ E EV L+ +
Sbjct: 359 RVDPDEVLVVNFMLELYKL--LDETATTVGTALRLARSLNPRIVTLGEYEVSLN----RV 412
Query: 240 EFVKGFQECLRWFRVYFESLDESFTKTSNERLMLERAA-GRAIVDLVAC-----QPSEST 293
EF + LR++ FESL+ + + S ERL +ER GR I+DLV +P
Sbjct: 413 EFANRVKNSLRFYSAVFESLEPNLDRDSKERLRVERVLFGRRIMDLVRSDDDNNKPGTRF 472
Query: 294 ERRETATRWSGRLHGAGFSPFMFSDEVCDDVRALLRRYKEG--WSMAQCPDAGIFLSWKD 351
E +W + AGF P S+ + LL Y +S+ + I L+W +
Sbjct: 473 GLMEEKEQWRVLMEKAGFEPVKPSNYAVSQAKLLLWNYNYSTLYSLVESEPGFISLAWNN 532
Query: 352 HTVVWASAWR 361
++ S+WR
Sbjct: 533 VPLLTVSSWR 542
>UNIPROTKB|Q84MM9 [details] [associations]
symbol:MOC1 "Protein MONOCULM 1" species:39947 "Oryza
sativa Japonica Group" [GO:0005634 "nucleus" evidence=IDA]
[GO:0010014 "meristem initiation" evidence=IMP] Pfam:PF03514
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 InterPro:IPR005202
PROSITE:PS50985 EMBL:AY242058 EMBL:AP003616 Gramene:Q84MM9
eggNOG:NOG323432 GO:GO:0010014 Uniprot:Q84MM9
Length = 441
Score = 308 (113.5 bits), Expect = 1.7e-27, P = 1.7e-27
Identities = 107/388 (27%), Positives = 171/388 (44%)
Query: 3 MLNELSSPYGDTDQKLSSYFLQALFGRMTDSGERCYRTLSSASDKTCSFESTRKMVLKFQ 62
+L +SP GD +L+ +F +AL R+ + + + + S + L F
Sbjct: 76 VLAAAASPRGDAADRLAYHFARALALRVDAKAGHGHVVVGGGAARPASSGA----YLAFN 131
Query: 63 EVSPWTTFGHVACNGAIMEAFEGESKLHIVDISNTYCTQWPTLLEALATRTDDT---PHL 119
+++P+ F H+ N AI+EA +G ++HI+D+ + QWP LL+A+A R D P +
Sbjct: 132 QIAPFLRFAHLTANQAILEAVDGARRVHILDLDAVHGVQWPPLLQAIAERADPALGPPEV 191
Query: 120 RLTTVVTSKPVXXXXXXXXXXVQKVMKEIGNRMEKFARLMGVPFEFNVI---------HH 170
R+T + + GNR+ FAR + +PF F + HH
Sbjct: 192 RVTGAGADRDT--------------LLRTGNRLRAFARSIHLPFHFTPLLLSCATTAPHH 237
Query: 171 V-----GDLCDLNLAE----LDVRSDEALAINCIGALHTIAAVDDRRDVLISNLRSLQPR 221
V G + A L+ DE LA+NC+ LH +A D+ + ++++ P
Sbjct: 238 VAGTSTGAAAAASTAAAATGLEFHPDETLAVNCVMFLHNLAGHDELA-AFLKWVKAMSPA 296
Query: 222 IITVVEEEVDLDVG----IDGLEFVKGFQECLRWFRVYFESLDESFTKTSNERLMLERAA 277
++T+ E E G ID L G + + FE+L+ + S ERL +E+
Sbjct: 297 VVTIAEREAGGGGGGGDHIDDLPRRVGV--AMDHYSAVFEALEATVPPGSRERLAVEQEV 354
Query: 278 -GRAIVDLVACQPSESTERRETATRWSGRLHGAGFSPFMFSDEVCDDVRALLRRY--KEG 334
GR I V PS R RW G AGF+ S R LLR + EG
Sbjct: 355 LGREIEAAVG--PSGGRWWRGIE-RWGGAARAAGFAARPLSAFAVSQARLLLRLHYPSEG 411
Query: 335 WSMAQCPDAGIFLSWKDHTVVWASAWRP 362
+ + + A FL W+ ++ SAW+P
Sbjct: 412 YLVQEARGA-CFLGWQTRPLLSVSAWQP 438
>TAIR|locus:2075155 [details] [associations]
symbol:AT3G46600 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0016671 "oxidoreductase
activity, acting on a sulfur group of donors, disulfide as
acceptor" evidence=IEA] [GO:0019538 "protein metabolic process"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010200 "response to chitin" evidence=IEP;RCA] [GO:0002679
"respiratory burst involved in defense response" evidence=RCA]
[GO:0035556 "intracellular signal transduction" evidence=RCA]
Pfam:PF03514 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0003700 GO:GO:0006351 GO:GO:0010200 EMBL:AL133314
InterPro:IPR005202 PROSITE:PS50985 HOGENOM:HOG000238576
ProtClustDB:CLSN2685117 EMBL:AK226419 EMBL:AY087418 IPI:IPI00537144
PIR:T45597 RefSeq:NP_190244.1 UniGene:At.595 STRING:Q9SNB8
EnsemblPlants:AT3G46600.1 GeneID:823813 KEGG:ath:AT3G46600
GeneFarm:4254 TAIR:At3g46600 eggNOG:NOG304481 InParanoid:Q9SNB8
OMA:FNESESQ PhylomeDB:Q9SNB8 Genevestigator:Q9SNB8 Uniprot:Q9SNB8
Length = 583
Score = 299 (110.3 bits), Expect = 8.1e-26, P = 8.1e-26
Identities = 96/365 (26%), Positives = 167/365 (45%)
Query: 4 LNELSSPYGDTDQKLSSYFLQALFGRMTDSGERCYRTLSSASDKTCSFESTRKMVLKFQE 63
+ E SS +GD Q+L +F +AL R+T + +S+ S +T S K F +
Sbjct: 235 IREHSSRHGDATQRLGYHFAEALEARITGT---MTTPISATSSRT-SMVDILKAYKGFVQ 290
Query: 64 VSPWTTFGHVACNGAIMEAFEGESKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTT 123
P + N I E + LHI+D Y QWP L++AL+ R P LR+T
Sbjct: 291 ACPTLIMCYFTANRTINELASKATTLHIIDFGILYGFQWPCLIQALSKRDIGPPLLRVTG 350
Query: 124 VVTSKPVXXXXXXXXXXVQKVMKEIGNRMEKFARLMGVPFEFNVIHHVGDLCDLNLAELD 183
+ P ++V +E G R+++F VPFE++ I + ++ L +L
Sbjct: 351 I--ELPQSGFRPS-----ERV-EETGRRLKRFCDKFNVPFEYSFIAKNWE--NITLDDLV 400
Query: 184 VRSDEALAINCIGAL-HT---IAAVDDRRDVLISNLRSLQPRIITVVEEEVDLDVGIDGL 239
+ S E +NCI L +T +++ RD + R + P + E ++ +
Sbjct: 401 INSGETTVVNCILRLQYTPDETVSLNSPRDTALKLFRDINPDLFVFAE----INGTYNSP 456
Query: 240 EFVKGFQECLRWFRVYFESLDESFTKTSNERLMLERAAG-RAIVDLVACQPSESTERRET 298
F+ F+E L F+ + + ++ N R ++ER R + ++AC+ SE R ET
Sbjct: 457 FFLTRFREALFHCSSLFDMYETTLSEDDNCRTLVERELIIRDAMSVIACEGSERFARPET 516
Query: 299 ATRWSGRLHGAGFSPFMFSDEVCDDVRALLR-RYKEGWSMAQCPDAGIFLSWKDHTVVWA 357
+W R+ AGF P S ++ D + +++ RY + + + + +F WK +
Sbjct: 517 YKQWQVRILRAGFRPAKLSKQIVKDGKEIVKERYHKDFVIDN-DNHWMFQGWKGRVLYAV 575
Query: 358 SAWRP 362
S W+P
Sbjct: 576 SCWKP 580
>TAIR|locus:2040701 [details] [associations]
symbol:AT2G37650 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] EMBL:AC004684 Pfam:PF03514 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003700 GO:GO:0006351
InterPro:IPR005202 PROSITE:PS50985 HOGENOM:HOG000238576
eggNOG:NOG319005 EMBL:AF036306 IPI:IPI00536640 PIR:T02531
PIR:T51240 RefSeq:NP_181301.1 UniGene:At.26205 UniGene:At.66411
PaxDb:O80933 PRIDE:O80933 EnsemblPlants:AT2G37650.1 GeneID:818342
KEGG:ath:AT2G37650 GeneFarm:4256 TAIR:At2g37650 InParanoid:O80933
OMA:WERVERP PhylomeDB:O80933 ProtClustDB:CLSN2912903
Genevestigator:O80933 Uniprot:O80933
Length = 718
Score = 301 (111.0 bits), Expect = 8.7e-26, P = 8.7e-26
Identities = 92/361 (25%), Positives = 161/361 (44%)
Query: 8 SSPYGDTDQKLSSYFLQALFGRMTDSGERCYRTLSSASDKTCSFESTRKMVLKFQEVSPW 67
S+P+GD +Q+L+ F L R+ +G + Y+ + S K S + K F P+
Sbjct: 374 STPFGDGNQRLAHCFANGLEARLAGTGSQIYKGIVS---KPRSAAAVLKAHQLFLACCPF 430
Query: 68 TTFGHVACNGAIMEAFEGESKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTS 127
+ N I + ++H++D Y QWPTL+ + +P +R+T +
Sbjct: 431 RKLSYFITNKTIRDLVGNSQRVHVIDFGILYGFQWPTLIHRFSMY--GSPKVRITGIEFP 488
Query: 128 KPVXXXXXXXXXXVQKVMKEIGNRMEKFARLMGVPFEFNVIHHVGDLCDLNLAELDVRSD 187
+P Q+V +E G R+ +A+L GVPFE+ I D + L +LD+ D
Sbjct: 489 QP-------GFRPAQRV-EETGQRLAAYAKLFGVPFEYKAIAKKWDA--IQLEDLDIDRD 538
Query: 188 EALAINCIGA---LHTIAA-VDDRRDVLISNLRSLQPRIITVVEEEVDLDVGIDGLEFVK 243
E +NC+ LH + V+ RD +++ + + P + ++ + FV
Sbjct: 539 EITVVNCLYRAENLHDESVKVESCRDTVLNLIGKINPDLFVFGI----VNGAYNAPFFVT 594
Query: 244 GFQECLRWFRVYFESLDESFTKTSNERLMLERAA-GRAIVDLVACQPSESTERRETATRW 302
F+E L F F+ L+ + ER+ LE GR ++++AC+ E ER ET +W
Sbjct: 595 RFREALFHFSSIFDMLETIVPREDEERMFLEMEVFGREALNVIACEGWERVERPETYKQW 654
Query: 303 SGRLHGAGFSPFMFSDEVCD-DVRALLRRYKEGWSMAQCPDAGIFLSWKDHTVVWASAWR 361
R +G F + + + Y + + + Q + + WK TV+ S W+
Sbjct: 655 HVRAMRSGLVQVPFDPSIMKTSLHKVHTFYHKDFVIDQ-DNRWLLQGWKGRTVMALSVWK 713
Query: 362 P 362
P
Sbjct: 714 P 714
>TAIR|locus:2148293 [details] [associations]
symbol:AT5G59450 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0010200 "response to chitin" evidence=IEP;RCA]
Pfam:PF03514 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0003700 GO:GO:0006351 GO:GO:0010200 EMBL:AB025604
InterPro:IPR005202 PROSITE:PS50985 EMBL:AY035001 EMBL:AY062942
EMBL:AF036307 IPI:IPI00541926 PIR:T51233 RefSeq:NP_200753.1
UniGene:At.29225 UniGene:At.63919 UniGene:At.72775 STRING:Q9LTI5
EnsemblPlants:AT5G59450.1 GeneID:836064 KEGG:ath:AT5G59450
GeneFarm:4255 TAIR:At5g59450 eggNOG:NOG254902 HOGENOM:HOG000238576
InParanoid:Q9LTI5 OMA:KPATISK PhylomeDB:Q9LTI5
ProtClustDB:CLSN2685117 Genevestigator:Q9LTI5 Uniprot:Q9LTI5
Length = 610
Score = 298 (110.0 bits), Expect = 1.2e-25, P = 1.2e-25
Identities = 99/363 (27%), Positives = 155/363 (42%)
Query: 8 SSPYGDTDQKLSSYFLQALFGRMTDSGERCYRTLSSASDKTCSFESTRKMVLKFQEVSPW 67
SS GD Q+L+ YF +AL R+T G + T S K F P
Sbjct: 254 SSSNGDGTQRLAFYFAEALEARIT--GNISPPVSNPFPSSTTSMVDILKAYKLFVHTCPI 311
Query: 68 TTFGHVACNGAIMEAFEGESKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTS 127
+ A N +I E +KLHIVD Y QWP LL AL+ R P LR+T +
Sbjct: 312 YVTDYFAANKSIYELAMKATKLHIVDFGVLYGFQWPCLLRALSKRPGGPPMLRVTGI--E 369
Query: 128 KPVXXXXXXXXXXVQKVMKEIGNRMEKFARLMGVPFEFNVIHHVGDLCDLNLAELDVRSD 187
P ++E G R+++F VPFEFN I + + L EL +
Sbjct: 370 LPQAGFRPSDR------VEETGRRLKRFCDQFNVPFEFNFIAKKWET--ITLDELMINPG 421
Query: 188 EALAINCIGAL-HT---IAAVDDRRDVLISNLRSLQPRIITVVEEEVDLDVGIDGLEFVK 243
E +NCI L +T ++D RD ++ R + P + E ++ + F+
Sbjct: 422 ETTVVNCIHRLQYTPDETVSLDSPRDTVLKLFRDINPDLFVFAE----INGMYNSPFFMT 477
Query: 244 GFQECLRWFRVYFESLDESFTKTSN--ERLMLERAA-GRAIVDLVACQPSESTERRETAT 300
F+E L + F+ D + R +LER R + +++C+ +E R ET
Sbjct: 478 RFREALFHYSSLFDMFDTTIHAEDEYKNRSLLERELLVRDAMSVISCEGAERFARPETYK 537
Query: 301 RWSGRLHGAGFSPFMFSDEVCDDVRALLR-RYKEGWSMAQCPDAGIFLSWKDHTVVWASA 359
+W R+ AGF P S ++ + + ++R RY + + + + WK + S
Sbjct: 538 QWRVRILRAGFKPATISKQIMKEAKEIVRKRYHRDF-VIDSDNNWMLQGWKGRVIYAFSC 596
Query: 360 WRP 362
W+P
Sbjct: 597 WKP 599
>TAIR|locus:2025032 [details] [associations]
symbol:AT1G07520 "AT1G07520" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0010200 "response to chitin" evidence=IEP;RCA] [GO:0002679
"respiratory burst involved in defense response" evidence=RCA]
[GO:0035556 "intracellular signal transduction" evidence=RCA]
Pfam:PF03514 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0006355 GO:GO:0006351 GO:GO:0010200 EMBL:AC022464
InterPro:IPR005202 PROSITE:PS50985 PIR:T51232 eggNOG:NOG319005
EMBL:AB493440 EMBL:BX839686 IPI:IPI00525480 IPI:IPI01019456
RefSeq:NP_172232.1 UniGene:At.63938 UniGene:At.71785 STRING:Q3EDH0
PRIDE:Q3EDH0 GeneID:837266 KEGG:ath:AT1G07520 GeneFarm:4253
TAIR:At1g07520 InParanoid:Q3EDH0 OMA:VRIENEV Genevestigator:Q3EDH0
Uniprot:Q3EDH0
Length = 695
Score = 286 (105.7 bits), Expect = 3.4e-24, P = 3.4e-24
Identities = 90/362 (24%), Positives = 155/362 (42%)
Query: 9 SPYGDTDQKLSSYFLQALFGRMTDS-GERCYRTLSSASDKTCSFESTRKMVLKFQEVSPW 67
SP GD Q+L+ +F AL R+ S G S S K + K F SP+
Sbjct: 346 SPVGDASQRLAHFFANALEARLEGSTGTMIQSYYDSISSKKRTAAQILKSYSVFLSASPF 405
Query: 68 TTFGHVACNGAIMEAFEGESKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTS 127
T + N I++A + S LHIVD Y QWP ++ L+ LR+T +
Sbjct: 406 MTLIYFFSNKMILDAAKDASVLHIVDFGILYGFQWPMFIQHLSKSNPGLRKLRITGIEIP 465
Query: 128 KPVXXXXXXXXXXVQKVMKEIGNRMEKFARLMGVPFEFNVIHHVGDLCDLNLAELDVRSD 187
+ +++ ++ G R+ ++ + GVPFE+N I + + + E +R +
Sbjct: 466 Q-------HGLRPTERI-QDTGRRLTEYCKRFGVPFEYNAIASK-NWETIKMEEFKIRPN 516
Query: 188 EALAINCIGALHTIAAV-----DDRRDVLISNLRSLQPRIITVVEEEVDLDVGIDGLEFV 242
E LA+N + + V D RD + +R + P + ++ + F
Sbjct: 517 EVLAVNAVLRFKNLRDVIPGEEDCPRDGFLKLIRDMNPNVFL----SSTVNGSFNAPFFT 572
Query: 243 KGFQECLRWFRVYFESLDESFTKTSNERLMLE-RAAGRAIVDLVACQPSESTERRETATR 301
F+E L + F+ + +K + ER+ E GR +++++AC+ + ER ET +
Sbjct: 573 TRFKEALFHYSALFDLFGATLSKENPERIHFEGEFYGREVMNVIACEGVDRVERPETYKQ 632
Query: 302 WSGRLHGAGFSPFMFSDEVCDDVRALLRRYKEGWSMAQCPDAGIFLS-WKDHTVVWASAW 360
W R+ AGF E+ R ++++ D+ FL WK + +S W
Sbjct: 633 WQVRMIRAGFKQKPVEAELVQLFREKMKKWGYHKDFVLDEDSNWFLQGWKGRILFSSSCW 692
Query: 361 RP 362
P
Sbjct: 693 VP 694
>TAIR|locus:2184625 [details] [associations]
symbol:SCL8 "AT5G52510" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0005737 "cytoplasm" evidence=IDA]
Pfam:PF03514 GO:GO:0005634 GO:GO:0005737 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003700 GO:GO:0006351
InterPro:IPR005202 PROSITE:PS50985 EMBL:AP000378 EMBL:AF036305
EMBL:AY099686 EMBL:AY128868 IPI:IPI00531227 PIR:T51239
RefSeq:NP_200064.3 UniGene:At.22412 UniGene:At.71617 STRING:Q9FYR7
PRIDE:Q9FYR7 EnsemblPlants:AT5G52510.1 GeneID:835327
KEGG:ath:AT5G52510 GeneFarm:4234 TAIR:At5g52510 eggNOG:NOG240925
HOGENOM:HOG000239354 InParanoid:Q9FYR7 OMA:PGAPWRD PhylomeDB:Q9FYR7
ProtClustDB:CLSN2680518 Genevestigator:Q9FYR7 Uniprot:Q9FYR7
Length = 640
Score = 283 (104.7 bits), Expect = 5.8e-24, P = 5.8e-24
Identities = 79/309 (25%), Positives = 147/309 (47%)
Query: 63 EVSPWTTFGHVACNGAIMEAFE---GESKL-HIVDISNTYCTQWPTLLEALATRTDDTPH 118
E+SP G A N AI++A + G + H++D Q+ LL L+TR +
Sbjct: 338 ELSPCFKLGFEAANLAILDAADNNDGGMMIPHVIDFDIGEGGQYVNLLRTLSTRRNGKSQ 397
Query: 119 LRLTTVVTSKPVXXXXXX--XXXXVQKVMKEIGNRMEKFARLMGVPFEFNVIHHVGDLCD 176
+ + VV V ++ +K +G+ + + +G+ FNV+ + L D
Sbjct: 398 SQNSPVVKITAVANNVYGCLVDDGGEERLKAVGDLLSQLGDRLGISVSFNVVTSLR-LGD 456
Query: 177 LNLAELDVRSDEALAINCIGALHTI----AAVDDRRDVLISNLRSLQPRIITVVEEEVDL 232
LN L DE LA+N L+ + ++ RD L+ ++ L+PR++T+VE+E++
Sbjct: 457 LNRESLGCDPDETLAVNLAFKLYRVPDESVCTENPRDELLRRVKGLKPRVVTLVEQEMNS 516
Query: 233 DVGIDGLEFVKGFQECLRWFRVYFESLDESFTKTSNERLMLERAAGRAIVDLVACQPSES 292
+ F+ E + ES++ + T+++R +E GR +V+ VAC+ +
Sbjct: 517 NTA----PFLGRVSESCACYGALLESVESTVPSTNSDRAKVEEGIGRKLVNAVACEGIDR 572
Query: 293 TERRETATRWSGRLHGAGFSPFMFSDEVCDDVRALLRRYKEGWSMAQCPDAGIFLSWKDH 352
ER E +W R+ AGF S+++ + +++ R G+++ + + G+ W
Sbjct: 573 IERCEVFGKWRMRMSMAGFELMPLSEKIAESMKSRGNRVHPGFTVKE-DNGGVCFGWMGR 631
Query: 353 TVVWASAWR 361
+ ASAWR
Sbjct: 632 ALTVASAWR 640
>TAIR|locus:2132482 [details] [associations]
symbol:AT4G08250 "AT4G08250" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003700 GO:GO:0006351
InterPro:IPR005202 PROSITE:PS50985 EMBL:AL080252 EMBL:AL161510
EMBL:BT011797 IPI:IPI00529829 PIR:T10552 RefSeq:NP_192565.1
UniGene:At.50325 DNASU:826375 EnsemblPlants:AT4G08250.1
GeneID:826375 KEGG:ath:AT4G08250 GeneFarm:4263 TAIR:At4g08250
eggNOG:NOG320032 HOGENOM:HOG000239937 InParanoid:Q9SUF5 OMA:SLEAGFP
PhylomeDB:Q9SUF5 ProtClustDB:CLSN2685964 Genevestigator:Q9SUF5
Uniprot:Q9SUF5
Length = 483
Score = 273 (101.2 bits), Expect = 2.9e-23, P = 2.9e-23
Identities = 98/366 (26%), Positives = 163/366 (44%)
Query: 4 LNELSSPYGDTD-QKLSSYFLQALFGRMTDSGERC---YRT-LSSASDKTCSFESTRKMV 58
L +L SP T+ ++L+++F L + C +R + +D +FE
Sbjct: 132 LKDLVSPGDRTNMERLAAHFTNGLSKLLERDSVLCPQQHRDDVYDQADVISAFEL----- 186
Query: 59 LKFQEVSPWTTFGHVACNGAIMEAFEGESKLHIVDISNTYCTQWPTLLEALATRTD--DT 116
Q +SP+ FG++ AI+EA + E ++HIVD QW +L++AL +R
Sbjct: 187 --LQNMSPYVNFGYLTATQAILEAVKYERRIHIVDYDINEGVQWASLMQALVSRNTGPSA 244
Query: 117 PHLRLTTVVTSKPVXXXXXXXXXXVQKVMKEIGNRMEKFARLMGVPFEFNVIHHVGDLCD 176
HLR+T + S+ VQ E G R+ FA +G PF + H D
Sbjct: 245 QHLRITAL--SR--ATNGKKSVAAVQ----ETGRRLTAFADSIGQPFSYQ--HCKLDTNA 294
Query: 177 LNLAELDVRSDEALAINCIGALHTIAAVDDRRDV-LISNLRSLQPRIITVVEEEVDLDVG 235
+ + L + EA+ INC+ L + + +S ++L P+++T+V EEV L +G
Sbjct: 295 FSTSSLKLVRGEAVVINCMLHLPRFSHQTPSSVISFLSEAKTLNPKLVTLVHEEVGL-MG 353
Query: 236 IDGLEFVKGFQECLRWFRVYFESLDESFTKTSNERLMLERA-AGRAIVDLVACQPSESTE 294
G F+ F + L F F+SL+ + + R +ER G + + + + E
Sbjct: 354 NQG--FLYRFMDLLHQFSAIFDSLEAGLSIANPARGFVERVFIGPWVANWLTRITANDAE 411
Query: 295 RRETATRWSGRLHGAGFSPFMFSDEVCDDVRALLRRYKEGWSMAQCPDAGIFLSWKDHTV 354
A+ W L GF P S + LL + +G+ + + G+ L WK +
Sbjct: 412 VESFAS-WPQWLETNGFKPLEVSFTNRCQAKLLLSLFNDGFRVEELGQNGLVLGWKSRRL 470
Query: 355 VWASAW 360
V AS W
Sbjct: 471 VSASFW 476
>TAIR|locus:2201557 [details] [associations]
symbol:RGL1 "RGA-like 1" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;TAS] [GO:0009740 "gibberellic acid mediated signaling
pathway" evidence=RCA;TAS] [GO:0009938 "negative regulation of
gibberellic acid mediated signaling pathway" evidence=IMP]
[GO:0009651 "response to salt stress" evidence=IGI] [GO:0009723
"response to ethylene stimulus" evidence=IGI;RCA] [GO:0009737
"response to abscisic acid stimulus" evidence=IGI;RCA] [GO:0042538
"hyperosmotic salinity response" evidence=IGI;RCA] [GO:0009739
"response to gibberellin stimulus" evidence=IEP] [GO:2000377
"regulation of reactive oxygen species metabolic process"
evidence=IGI] [GO:0009863 "salicylic acid mediated signaling
pathway" evidence=IGI;RCA] [GO:0009867 "jasmonic acid mediated
signaling pathway" evidence=IGI;RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010325 "raffinose family oligosaccharide biosynthetic process"
evidence=RCA] [GO:0048444 "floral organ morphogenesis"
evidence=RCA] Pfam:PF03514 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0009737 GO:GO:0005634 GO:GO:0030154 GO:GO:0009723
GO:GO:0003700 GO:GO:0006351 GO:GO:0009908 GO:GO:0042538
GO:GO:2000377 EMBL:AC020665 GO:GO:0040029 GO:GO:0009867
GO:GO:0009863 GO:GO:0009740 HOGENOM:HOG000238577 KO:K14494
GO:GO:0009938 InterPro:IPR021914 InterPro:IPR005202 Pfam:PF12041
PROSITE:PS50985 EMBL:AJ224957 EMBL:AY048749 EMBL:AY070035
EMBL:AY096506 IPI:IPI00518407 PIR:G96688 RefSeq:NP_176809.1
UniGene:At.26400 UniGene:At.75607 ProteinModelPortal:Q9C8Y3
SMR:Q9C8Y3 IntAct:Q9C8Y3 STRING:Q9C8Y3 EnsemblPlants:AT1G66350.1
GeneID:842953 KEGG:ath:AT1G66350 GeneFarm:4239 TAIR:At1g66350
eggNOG:NOG314007 InParanoid:Q9C8Y3 OMA:TSAWRIN PhylomeDB:Q9C8Y3
ProtClustDB:CLSN2914366 Genevestigator:Q9C8Y3 GermOnline:AT1G66350
Uniprot:Q9C8Y3
Length = 511
Score = 273 (101.2 bits), Expect = 3.6e-23, P = 3.6e-23
Identities = 69/220 (31%), Positives = 115/220 (52%)
Query: 145 MKEIGNRMEKFARLMGVPFEFNVIHHVGDLCDLNLAELDVRSD-EALAINCIGALHTIAA 203
++E+G ++ + A +GV FEF I + +L DL LD+R E++A+N + LH + A
Sbjct: 296 IQEVGWKLGQLASTIGVNFEFKSIA-LNNLSDLKPEMLDIRPGLESVAVNSVFELHRLLA 354
Query: 204 VDDRRDVLISNLRSLQPRIITVVEEEVDLDVGIDGLEFVKGFQECLRWFRVYFESLDESF 263
D +S ++S++P I+TVVE+E + + G F+ F E L ++ F+SL+
Sbjct: 355 HPGSIDKFLSTIKSIRPDIMTVVEQEANHN----GTVFLDRFTESLHYYSSLFDSLEGP- 409
Query: 264 TKTSNERLMLERAAGRAIVDLVACQPSESTERRETATRWSGRLHGAGFSPFMFSDEVCDD 323
S +R+M E GR I++LVAC+ + ER ET +W R GF P
Sbjct: 410 --PSQDRVMSELFLGRQILNLVACEGEDRVERHETLNQWRNRFGLGGFKPVSIGSNAYKQ 467
Query: 324 VRALLRRYK--EGWSMAQCPDAGIFLSWKDHTVVWASAWR 361
LL Y +G+++ + + + L W+ ++ SAWR
Sbjct: 468 ASMLLALYAGADGYNVEE-NEGCLLLGWQTRPLIATSAWR 506
Score = 248 (92.4 bits), Expect = 3.0e-19, P = 3.0e-19
Identities = 70/226 (30%), Positives = 111/226 (49%)
Query: 7 LSSPYGDTDQKLSSYFLQALFGRMTDSGERCYRTLSSASDKTCSFESTRKMVLKFQEVSP 66
L+S +K+++YF + L R YR SF T + + F E P
Sbjct: 181 LASSQAGAMRKVATYFAEGL-------ARRIYRIYPRDDVALSSFSDT--LQIHFYESCP 231
Query: 67 WTTFGHVACNGAIMEAFEGESKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVT 126
+ F H N AI+E F K+H++D+ + QWP L++ALA R + P RLT +
Sbjct: 232 YLKFAHFTANQAILEVFATAEKVHVIDLGLNHGLQWPALIQALALRPNGPPDFRLTGIGY 291
Query: 127 SKPVXXXXXXXXXXVQKVMKEIGNRMEKFARLMGVPFEFNVIHHVGDLCDLNLAELDVRS 186
S +Q E+G ++ + A +GV FEF I + +L DL LD+R
Sbjct: 292 S----------LTDIQ----EVGWKLGQLASTIGVNFEFKSIA-LNNLSDLKPEMLDIRP 336
Query: 187 D-EALAINCIGALHTIAAVDDRRDVLISNLRSLQPRIITVVEEEVD 231
E++A+N + LH + A D +S ++S++P I+TVVE+E +
Sbjct: 337 GLESVAVNSVFELHRLLAHPGSIDKFLSTIKSIRPDIMTVVEQEAN 382
>TAIR|locus:2080345 [details] [associations]
symbol:SCR "SCARECROW" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0009630
"gravitropism" evidence=IMP] [GO:0009956 "radial pattern formation"
evidence=IMP] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0042803 "protein homodimerization
activity" evidence=IPI] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0051457 "maintenance of protein location in
nucleus" evidence=IMP] [GO:0008356 "asymmetric cell division"
evidence=IMP] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
GO:GO:0009630 GO:GO:0008356 GO:GO:0051457 EMBL:AL132957
GO:GO:0010103 GO:GO:0009956 HOGENOM:HOG000238577 InterPro:IPR005202
PROSITE:PS50985 EMBL:U62798 EMBL:AY056315 EMBL:AY080840
EMBL:AY113991 IPI:IPI00524888 PIR:T47581 PIR:T51244
RefSeq:NP_190990.1 UniGene:At.71814 UniGene:At.932 IntAct:Q9M384
STRING:Q9M384 EnsemblPlants:AT3G54220.1 GeneID:824589
KEGG:ath:AT3G54220 GeneFarm:4242 TAIR:At3g54220 eggNOG:NOG311437
InParanoid:Q9M384 OMA:QERENSS PhylomeDB:Q9M384
ProtClustDB:CLSN2915643 Genevestigator:Q9M384 Uniprot:Q9M384
Length = 653
Score = 243 (90.6 bits), Expect = 2.8e-18, P = 2.8e-18
Identities = 66/205 (32%), Positives = 106/205 (51%)
Query: 4 LNELSSPYGDTDQKLSSYFLQALFGRMTDSGERCYRTLSSA-SDKTCSFESTRKMVLKFQ 62
+++LS+PYG + Q++++YF +A+ R+ +S Y L S +T S + + F
Sbjct: 316 ISQLSTPYGTSAQRVAAYFSEAMSARLLNSCLGIYAALPSRWMPQTHSLKMVSAFQV-FN 374
Query: 63 EVSPWTTFGHVACNGAIMEAFEGESKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLT 122
+SP F H N AI EAFE E +HI+D+ QWP L LA+R PH+RLT
Sbjct: 375 GISPLVKFSHFTANQAIQEAFEKEDSVHIIDLDIMQGLQWPGLFHILASRPGGPPHVRLT 434
Query: 123 TVVTSKPVXXXXXXXXXXVQKVMKEIGNRMEKFARLMGVPFEF-NVIHHVGDLCDLNLAE 181
+ TS + ++ G R+ FA +G+PFEF + VG+L +
Sbjct: 435 GLGTS--------------MEALQATGKRLSDFADKLGLPFEFCPLAEKVGNL---DTER 477
Query: 182 LDVRSDEALAINCIG-ALHTIAAVD 205
L+VR EA+A++ + +L+ + D
Sbjct: 478 LNVRKREAVAVHWLQHSLYDVTGSD 502
Score = 195 (73.7 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 62/225 (27%), Positives = 113/225 (50%)
Query: 143 KVMKEIGNRMEKFARLMGVPFEF-NVIHHVGDLCDLNLAELDVRSDEALAINCIGALHTI 201
+ ++ G R+ FA +G+PFEF + VG+L + L+VR EA+A++ + H++
Sbjct: 441 EALQATGKRLSDFADKLGLPFEFCPLAEKVGNL---DTERLNVRKREAVAVHWLQ--HSL 495
Query: 202 AAVDDRRDVLISNLRSLQPRIITVVEEEVDLDVGIDGLEFVKGFQECLRWFRVYFESLDE 261
V + L+ L P+++TVVE+++ G F+ F E + ++ F+SL
Sbjct: 496 YDVTGSDAHTLWLLQRLAPKVVTVVEQDLS-HAG----SFLGRFVEAIHYYSALFDSLGA 550
Query: 262 SFTKTSNERLMLERAA-GRAIVDLVACQ-PSESTERRETATRWSGRLHGAGFSPFMFSDE 319
S+ + S ER ++E+ + I +++A PS S E + + W ++ GF +
Sbjct: 551 SYGEESEERHVVEQQLLSKEIRNVLAVGGPSRSGEVKFES--WREKMQQCGFKGISLAGN 608
Query: 320 VCDDVRALLRRY-KEGWSMAQCPDAGIF-LSWKDHTVVWASAWRP 362
LL + +G+++ D G L WKD +++ ASAW P
Sbjct: 609 AATQATLLLGMFPSDGYTLVD--DNGTLKLGWKDLSLLTASAWTP 651
>TAIR|locus:2087994 [details] [associations]
symbol:AT3G13840 "AT3G13840" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003700 GO:GO:0006351 EMBL:AB028610
InterPro:IPR005202 PROSITE:PS50985 IPI:IPI00544801
RefSeq:NP_188000.1 UniGene:At.64114 PaxDb:Q9LRW3 PRIDE:Q9LRW3
EnsemblPlants:AT3G13840.1 GeneID:820596 KEGG:ath:AT3G13840
GeneFarm:4262 TAIR:At3g13840 eggNOG:NOG262645 HOGENOM:HOG000240132
InParanoid:Q9LRW3 OMA:WFAFPNN PhylomeDB:Q9LRW3
ProtClustDB:CLSN2684819 Genevestigator:Q9LRW3 Uniprot:Q9LRW3
Length = 510
Score = 231 (86.4 bits), Expect = 5.5e-17, P = 5.5e-17
Identities = 82/311 (26%), Positives = 146/311 (46%)
Query: 3 MLNELSSPYGDTDQKLSSYFLQALFGRMTDSG--ERCYRTLSSASDKTCSFESTRKMVLK 60
+L+EL+S GD +++L+++ L+AL ++ S + + AS + F+ T +LK
Sbjct: 170 VLSELASSSGDANRRLAAFGLRALQHHLSSSSVSSSFWPVFTFASAEVKMFQKT---LLK 226
Query: 61 FQEVSPWTTFGHVACNGAIMEAFEGESK----LHIVDISNTYCTQWPTLLEALATRTDDT 116
F EVSPW + N AI++ + K LHI+DI ++ QWPTLLEAL+ R +
Sbjct: 227 FYEVSPWFALPNNMANSAILQILAQDPKDKKDLHIIDIGVSHGMQWPTLLEALSCRLEGP 286
Query: 117 P-HLRLTTVVTSKPVXXXXXXXXXXVQKVMKEIGNRMEKFARLMGVPFEFNVIHHVGDLC 175
P +R+T + V G+++ FAR + + + +V+ D
Sbjct: 287 PPRVRITVI------SDLTADIPFSVGPPGYNYGSQLLGFARSLKINLQISVL----DKL 336
Query: 176 DLNLAELDVRSDEALAINCIGALHTIA-AVDDRRDVLISNLRSLQPRIITVVEEEVDLDV 234
L +D E L + LH + +++D R + +RSL+P+ + + E +
Sbjct: 337 QL----IDTSPHENLIVCAQFRLHHLKHSINDERGETLKAVRSLRPKGVVLCENNGECSS 392
Query: 235 GIDGLEFVKGFQECLRWFRVYFESLDESFTK-TSNERLMLERAAGRAIVDLVACQPSEST 293
D F GF + L + + +S F + S ER ++E A + +++ A +E
Sbjct: 393 SAD---FAAGFSKKLEYVWKFLDSTSSGFKEENSEERKLMEGEATKVLMN--AGDMNEGK 447
Query: 294 ERRETATRWSG 304
E+ R +G
Sbjct: 448 EKWYERMREAG 458
Score = 161 (61.7 bits), Expect = 7.4e-09, P = 7.4e-09
Identities = 51/210 (24%), Positives = 93/210 (44%)
Query: 156 ARLMGVPFEFNVIHHVGDLCDLNLAELDVRSDEALAINCIGALHTIA-AVDDRRDVLISN 214
++L+G + + L L L +D E L + LH + +++D R +
Sbjct: 315 SQLLGFARSLKINLQISVLDKLQL--IDTSPHENLIVCAQFRLHHLKHSINDERGETLKA 372
Query: 215 LRSLQPRIITVVEEEVDLDVGIDGLEFVKGFQECLRWFRVYFESLDESFTK-TSNERLML 273
+RSL+P+ + + E + D F GF + L + + +S F + S ER ++
Sbjct: 373 VRSLRPKGVVLCENNGECSSSAD---FAAGFSKKLEYVWKFLDSTSSGFKEENSEERKLM 429
Query: 274 ERAAGRAIVDLVACQPSESTERRETATRWSGRLHGAGFSPFMFSDEVCDDVRALLRRYKE 333
E A + +++ + E +E +W R+ AGF F ++ D ++LLR+Y
Sbjct: 430 EGEATKVLMNA-----GDMNEGKE---KWYERMREAGFFVEAFEEDAVDGAKSLLRKYDN 481
Query: 334 GWSMAQCPDAGIF--LSWKDHTVVWASAWR 361
W + + D F L WK V + S W+
Sbjct: 482 NWEI-RMEDGDTFAGLMWKGEAVSFCSLWK 510
>TAIR|locus:2015243 [details] [associations]
symbol:AT1G63100 "AT1G63100" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0000226 "microtubule cytoskeleton organization"
evidence=RCA] [GO:0000911 "cytokinesis by cell plate formation"
evidence=RCA] [GO:0048451 "petal formation" evidence=RCA]
[GO:0048453 "sepal formation" evidence=RCA] Pfam:PF03514
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003700
GO:GO:0006351 EMBL:AC010795 InterPro:IPR005202 PROSITE:PS50985
IPI:IPI00520577 PIR:D96656 RefSeq:NP_176498.1 UniGene:At.66082
ProteinModelPortal:Q9CAN3 SMR:Q9CAN3 PRIDE:Q9CAN3
EnsemblPlants:AT1G63100.1 GeneID:842613 KEGG:ath:AT1G63100
GeneFarm:4261 TAIR:At1g63100 eggNOG:NOG286854 HOGENOM:HOG000241666
InParanoid:Q9CAN3 OMA:RTKCENE PhylomeDB:Q9CAN3
ProtClustDB:CLSN2682380 Genevestigator:Q9CAN3 Uniprot:Q9CAN3
Length = 658
Score = 224 (83.9 bits), Expect = 6.9e-16, P = 6.9e-16
Identities = 70/235 (29%), Positives = 116/235 (49%)
Query: 6 ELSSPYGDTDQ-KLSSYFLQALFGRMTDSGERCYRTLSSAS-DKTCSFESTRKMVLKF-Q 62
+L+SP G T +L +Y+++AL R+ + D+T ES L+F
Sbjct: 302 DLASPRGRTPMTRLIAYYIEALALRVARMWPHIFHIAPPREFDRTVEDESGN--ALRFLN 359
Query: 63 EVSPWTTFGHVACNGAIMEAFEGESKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLT 122
+V+P F H N ++ AFEG+ ++HI+D QWP+ ++LA+R + H+R+T
Sbjct: 360 QVTPIPKFIHFTANEMLLRAFEGKERVHIIDFDIKQGLQWPSFFQSLASRINPPHHVRIT 419
Query: 123 TVVTSKPVXXXXXXXXXXVQKVMKEIGNRMEKFARLMGVPFEFNVIHHVGDLCDLNLAEL 182
+ SK + E G+R+ FA M + FEF+ + V L D+ L L
Sbjct: 420 GIGESK--------------LELNETGDRLHGFAEAMNLQFEFHPV--VDRLEDVRLWML 463
Query: 183 DVRSDEALAINCIGALH------TIAAVDDRRDVLISNLRSLQPRIITVVEEEVD 231
V+ E++A+NC+ +H T AA+ RD L +RS P + + E+E +
Sbjct: 464 HVKEGESVAVNCVMQMHKTLYDGTGAAI---RDFL-GLIRSTNPIALVLAEQEAE 514
Score = 173 (66.0 bits), Expect = 5.1e-10, P = 5.1e-10
Identities = 65/236 (27%), Positives = 105/236 (44%)
Query: 145 MKEIGNRMEKFARLMGVPFEFNVIHHVGDLCDLNLAELDVRSDEALAINCIGALH----- 199
+ E G+R+ FA M + FEF+ + V L D+ L L V+ E++A+NC+ +H
Sbjct: 428 LNETGDRLHGFAEAMNLQFEFHPV--VDRLEDVRLWMLHVKEGESVAVNCVMQMHKTLYD 485
Query: 200 -TIAAVDDRRDVLISNLRSLQPRIITVVEEEVDLDVGIDGLEFVKGFQECLRWFRVYFES 258
T AA+ RD L +RS P + + E+E + + + LE L+++ F++
Sbjct: 486 GTGAAI---RDFL-GLIRSTNPIALVLAEQEAEHNS--EQLE--TRVCNSLKYYSAMFDA 537
Query: 259 LDESFTKTSNERLMLERAA-GRAIVDLVACQPSESTERRETATRWSGRLHGAGFSPFMFS 317
+ + S R+ +E GR I ++VAC+ S ER W L GF S
Sbjct: 538 IHTNLATDSLMRVKVEEMLFGREIRNIVACEGSHRQERHVGFRHWRRMLEQLGFRSLGVS 597
Query: 318 DEVCDDVRALLRRY---KEGWSMAQCPD----------AGIFLSWKDHTVVWASAW 360
+ + LLR Y EG+ + D G+ L W + + SAW
Sbjct: 598 EREVLQSKMLLRMYGSDNEGFFNVERSDEDNGGEGGRGGGVTLRWSEQPLYTISAW 653
>TAIR|locus:2165685 [details] [associations]
symbol:AT5G41920 "AT5G41920" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003700 GO:GO:0006351 EMBL:AB017067
HOGENOM:HOG000238577 InterPro:IPR005202 PROSITE:PS50985
EMBL:BT029760 IPI:IPI00535918 RefSeq:NP_199007.1 UniGene:At.67848
UniGene:At.72727 IntAct:Q9FHZ1 DNASU:834197
EnsemblPlants:AT5G41920.1 GeneID:834197 KEGG:ath:AT5G41920
GeneFarm:4246 TAIR:At5g41920 eggNOG:NOG72098 InParanoid:Q9FHZ1
OMA:PWKGYTL PhylomeDB:Q9FHZ1 ProtClustDB:CLSN2686419
Genevestigator:Q9FHZ1 Uniprot:Q9FHZ1
Length = 405
Score = 205 (77.2 bits), Expect = 3.9e-14, P = 3.9e-14
Identities = 63/221 (28%), Positives = 106/221 (47%)
Query: 144 VMKEIGNRMEKFARLMGVPFEFNVIHHV-GDLCDLNLAELDVRSDEALAINCIGALHTIA 202
++ G R+ FA + +PFEF+ I + G+L D + +L R EA+ ++ + H +
Sbjct: 193 LLASTGRRLADFASSLNLPFEFHPIEGIIGNLIDPS--QLATRQGEAVVVHWMQ--HRLY 248
Query: 203 AVDDRRDVLISNLRSLQPRIITVVEEEVDLDVGIDGLEFVKGFQECLRWFRVYFESLDES 262
V + LR L+P +ITVVE+E+ D DG F+ F E L ++ F++L +
Sbjct: 249 DVTGNNLETLEILRRLKPNLITVVEQELSYD---DGGSFLGRFVEALHYYSALFDALGDG 305
Query: 263 FTKTSNERLMLERAA-GRAIVDLVACQPSESTERRETATRWSGRLHGAGFSPFMFSDEVC 321
+ S ER +E+ G I ++VA RR+ +W L GF P
Sbjct: 306 LGEESGERFTVEQIVLGTEIRNIVA----HGGGRRKRM-KWKEELSRVGFRPVSLRGNPA 360
Query: 322 DDVRALLRRYK-EGWSMAQCPDAGIFLSWKDHTVVWASAWR 361
LL G+++ + + + L WKD +++ ASAW+
Sbjct: 361 TQAGLLLGMLPWNGYTLVE-ENGTLRLGWKDLSLLTASAWK 400
Score = 193 (73.0 bits), Expect = 1.0e-12, P = 1.0e-12
Identities = 56/194 (28%), Positives = 93/194 (47%)
Query: 4 LNELSSPYGDTDQKLSSYFLQALFGRMTDSGERCYRTLSSASDKTCSFESTRKMVLKFQ- 62
++E+ SP+G + +++ +YF QAL R+ S S S+K + ++K+ Q
Sbjct: 66 ISEICSPFGSSPERVVAYFAQALQTRVISS--YLSGACSPLSEKPLTVVQSQKIFSALQT 123
Query: 63 --EVSPWTTFGHVACNGAIMEAFEGESKLHIVDISNTYCTQWPTLLEALATRTDDTPHLR 120
VSP F H N AI +A +GE +HI+D+ QWP L LA+R +R
Sbjct: 124 YNSVSPLIKFSHFTANQAIFQALDGEDSVHIIDLDVMQGLQWPALFHILASRPRKLRSIR 183
Query: 121 LTTVVTSKPVXXXXXXXXXXVQKVMKEIGNRMEKFARLMGVPFEFNVIHHV-GDLCDLNL 179
+T +S + + G R+ FA + +PFEF+ I + G+L D +
Sbjct: 184 ITGFGSSSDL--------------LASTGRRLADFASSLNLPFEFHPIEGIIGNLIDPS- 228
Query: 180 AELDVRSDEALAIN 193
+L R EA+ ++
Sbjct: 229 -QLATRQGEAVVVH 241
>TAIR|locus:2115340 [details] [associations]
symbol:HAM4 "AT4G36710" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0030154 "cell differentiation" evidence=IMP]
[GO:0048831 "regulation of shoot system development" evidence=IGI]
Pfam:PF03514 GO:GO:0005634 GO:GO:0030154 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003700 GO:GO:0006351 GO:GO:0048831
EMBL:AL161589 EMBL:Z99708 InterPro:IPR005202 PROSITE:PS50985
EMBL:AK118497 IPI:IPI00538111 PIR:E85433 RefSeq:NP_195389.4
UniGene:At.31304 PaxDb:O23210 PRIDE:O23210 DNASU:829824
EnsemblPlants:AT4G36710.1 GeneID:829824 KEGG:ath:AT4G36710
GeneFarm:4264 TAIR:At4g36710 eggNOG:NOG271584 HOGENOM:HOG000090733
InParanoid:O23210 OMA:ELVLCWH ProtClustDB:CLSN2717261
Genevestigator:O23210 Uniprot:O23210
Length = 486
Score = 185 (70.2 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 79/364 (21%), Positives = 148/364 (40%)
Query: 4 LNE-LSSPYGDTDQKLSSYFLQALFGRMTDSGERCYRTLSSASDKTCSFESTRKMVLKFQ 62
LN+ L SP G Q+ + YF +AL +T S R LSS S+ + + ++
Sbjct: 148 LNQRLRSPAGRPLQRAAFYFKEALGSFLTGSNRNPIR-LSSWSE----IVQRIRAIKEYS 202
Query: 63 EVSPWTTFGHVACNGAIMEAFEGESK---LHIVDISNTYCTQWPTLLEALATRTDDTPHL 119
+SP F H N AI+++ +S +H+VD + Q+ +L+ + ++ L
Sbjct: 203 GISPIPLFSHFTANQAILDSLSSQSSSPFVHVVDFEIGFGGQYASLMREITEKSVSGGFL 262
Query: 120 RLTTVVTSKPVXXXXXXXXXXVQKVMKEIGNRMEKFARLMGVPFEFN-VIHHVGDLCDLN 178
R+T VV + +++KE + +FA M + F+ V+ ++
Sbjct: 263 RVTAVVAEECAVET---------RLVKE---NLTQFAAEMKIRFQIEFVLMKTFEMLSFK 310
Query: 179 LAELDVRSDEALAINCIGALHTIAAVDDRRDVLISNLRSLQPRIITVVEEEVDLDVGIDG 238
V + + + ++ + D ++NLR + P+++ V+ E ++ G
Sbjct: 311 AIRF-VEGERTVVLISPAIFRRLSGITD----FVNNLRRVSPKVVVFVDSEGWTEIAGSG 365
Query: 239 LEFVKGFQECLRWFRVYFESLDESFTKTSNERLMLERAAGRAIVDLVACQPSESTERRET 298
F + F L ++ + ESLD + + ++E R + A + + R
Sbjct: 366 -SFRREFVSALEFYTMVLESLDAAAPPGDLVKKIVEAFVLRPKIS--AAVETAADRRHTG 422
Query: 299 ATRWSGRLHGAGFSPFMFSDEVCDDVRALLRRYK-EGWSMAQCPDAGIFLSWKDHTVVWA 357
W AG P S LL + + G+ +A+ + L W +V
Sbjct: 423 EMTWREAFCAAGMRPIQLSQFADFQAECLLEKAQVRGFHVAK-RQGELVLCWHGRALVAT 481
Query: 358 SAWR 361
SAWR
Sbjct: 482 SAWR 485
>TAIR|locus:2101801 [details] [associations]
symbol:HAM2 "AT3G60630" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0010492 "maintenance of shoot apical meristem
identity" evidence=IGI] [GO:0030154 "cell differentiation"
evidence=IMP] [GO:0048768 "root hair cell tip growth" evidence=IMP]
[GO:0051301 "cell division" evidence=IMP] [GO:0007020 "microtubule
nucleation" evidence=RCA] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0051301 GO:GO:0003700 GO:GO:0006351
GO:GO:0048768 GO:GO:0010492 EMBL:AL162295 InterPro:IPR005202
PROSITE:PS50985 EMBL:AY064062 EMBL:AY096372 EMBL:EU550731
EMBL:EU550732 EMBL:EU550733 EMBL:EU550734 EMBL:EU550735
EMBL:EU550736 EMBL:EU550737 EMBL:EU550738 EMBL:EU550739
EMBL:EU550740 EMBL:EU550741 EMBL:EU550742 EMBL:EU550743
EMBL:EU550744 EMBL:EU550745 EMBL:EU550746 EMBL:EU550747
EMBL:EU550748 EMBL:EU550749 EMBL:EU550750 EMBL:EU550752
EMBL:EU550754 EMBL:EU550751 EMBL:EU550753 IPI:IPI00520916
PIR:T47874 RefSeq:NP_191622.1 UniGene:At.27084 IntAct:Q9M000
EnsemblPlants:AT3G60630.1 GeneID:825234 KEGG:ath:AT3G60630
GeneFarm:4227 TAIR:At3g60630 eggNOG:NOG261649 HOGENOM:HOG000239326
InParanoid:Q9M000 OMA:ANQTILE PhylomeDB:Q9M000
ProtClustDB:CLSN2683334 Genevestigator:Q9M000 Uniprot:Q9M000
Length = 623
Score = 186 (70.5 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 82/354 (23%), Positives = 141/354 (39%)
Query: 17 KLSSYFLQALFGRMTDSGERCYRTLSSASDKTCSFESTRKMVLKFQEVSPWTTFGHVACN 76
+ +SY +AL + DS +LS + + R F E SP+ F + N
Sbjct: 294 RAASYITEALHSLLQDSS-LSPPSLSPPQNLIFRIAAYRA----FSETSPFLQFVNFTAN 348
Query: 77 GAIMEAFEGESKLHIVDISNTYCTQWPTLLEALA---TRTDDTPHLRLTTVVTSKPVXXX 133
I+E+FEG ++HIVD Y QW +L++ LA R+ P L++T + V
Sbjct: 349 QTILESFEGFDRIHIVDFDIGYGGQWASLIQELAGKRNRSSSAPSLKITAFASPSTVSDE 408
Query: 134 XXXXXXXVQKVMKEIGNRMEKFARLMGVPFEFNVIHHVGDLCDLNLAELDV-RSDE--AL 190
+ +E + FA GV FE +++ + L + L + RS E A+
Sbjct: 409 FEL------RFTEE---NLRSFAGETGVSFEIELLN-MEILLNPTYWPLSLFRSSEKEAI 458
Query: 191 AINCIGALHTIAAVDDRRDVLISNLRSLQPRIITVVEEEVDLDVGIDGLEFVKGFQECLR 250
A+N L + V +++ L+ + P ++ + D + + F G L+
Sbjct: 459 AVN----LPISSMVSGYLPLILRFLKQISPNVVVCSDRSCDRN---NDAPFPNGVINALQ 511
Query: 251 WFRVYFESLDESFTKTSNERLMLERAAGRAIVDLVACQPSESTERRETATRWSGRLHGAG 310
++ ESLD + +ER + + + ER + W G
Sbjct: 512 YYTSLLESLDSGNLNNAEAATSIERFCVQPSIQKLLTNRYRWMER---SPPWRSLFGQCG 568
Query: 311 FSPFMFSDEVCDDVRALLRRYK-EGWSMA--QCPDAGIFLSWKDHTVVWASAWR 361
F+P S LL+R G+ + Q + L W+ +V SAW+
Sbjct: 569 FTPVTLSQTAETQAEYLLQRNPMRGFHLEKRQSSSPSLVLCWQRKELVTVSAWK 622
>TAIR|locus:2126901 [details] [associations]
symbol:HAM3 "AT4G00150" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0010492 "maintenance of shoot apical meristem identity"
evidence=IGI] [GO:0030154 "cell differentiation" evidence=IMP]
[GO:0048768 "root hair cell tip growth" evidence=IMP] [GO:0051301
"cell division" evidence=IMP] [GO:0007623 "circadian rhythm"
evidence=IEP] Pfam:PF03514 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0051301 GO:GO:0007623 GO:GO:0003700
GO:GO:0006351 GO:GO:0048768 GO:GO:0010492 EMBL:AL161471
EMBL:AF069299 InterPro:IPR005202 PROSITE:PS50985
HOGENOM:HOG000239326 eggNOG:NOG320780 EMBL:AF462831 EMBL:AY133537
EMBL:AF036303 EMBL:EU550755 EMBL:EU550756 EMBL:EU550757
EMBL:EU550758 EMBL:EU550759 EMBL:EU550760 EMBL:EU550761
EMBL:EU550762 EMBL:EU550763 EMBL:EU550764 EMBL:EU550765
EMBL:EU550766 EMBL:EU550767 EMBL:EU550768 EMBL:EU550769
EMBL:EU550770 EMBL:EU550771 EMBL:EU550772 EMBL:EU550773
EMBL:EU550774 EMBL:EU550775 EMBL:EU550776 EMBL:EU550777
IPI:IPI00542979 PIR:T01343 PIR:T51237 RefSeq:NP_191926.1
UniGene:At.3732 UniGene:At.67226 IntAct:O81316
EnsemblPlants:AT4G00150.1 GeneID:828208 KEGG:ath:AT4G00150
GeneFarm:4228 TAIR:At4g00150 InParanoid:O81316 OMA:KTPPWRA
PhylomeDB:O81316 ProtClustDB:CLSN2916162 Genevestigator:O81316
Uniprot:O81316
Length = 558
Score = 131 (51.2 bits), Expect = 4.0e-08, Sum P(2) = 4.0e-08
Identities = 41/129 (31%), Positives = 65/129 (50%)
Query: 4 LNE-LSSPYGDTDQKLSSYFLQALFGRMTDSGERCYRTLSSAS--DKTCSFESTRKMVLK 60
LN+ LSSP G ++ + YF +AL + + + TL+ S K +++S
Sbjct: 230 LNQQLSSPVGKPLERAAFYFKEALNNLLHNVSQ----TLNPYSLIFKIAAYKS------- 278
Query: 61 FQEVSPWTTFGHVACNGAIMEAFEGESKLHIVDISNTYCTQWPTLLEALATRTDDTPHLR 120
F E+SP F + N A++E+F G +LHI+D Y QW +L++ L R + P L
Sbjct: 279 FSEISPVLQFANFTSNQALLESFHGFHRLHIIDFDIGYGGQWASLMQELVLRDNAAP-LS 337
Query: 121 LTTVVTSKP 129
L V + P
Sbjct: 338 LKITVFASP 346
Score = 68 (29.0 bits), Expect = 4.0e-08, Sum P(2) = 4.0e-08
Identities = 36/166 (21%), Positives = 64/166 (38%)
Query: 197 ALHTIAAVDDRRDVLISNLRSLQPRIITVVEEEVDLDVGIDGLEFVKGFQECLRWFRVYF 256
A++ AA +++ ++ L P II + + L F + L F
Sbjct: 397 AVNISAASFSHLPLVLRFVKHLSPTIIVCSDRGCERT----DLPFSQQLAHSLHSHTALF 452
Query: 257 ESLDESFTKTSNERLMLERAAGRAIVDLVACQPSESTERRETATRWSGRLHGAGFSPFMF 316
ESLD + + +ER + ++ + S ER W GFSP
Sbjct: 453 ESLD-AVNANLDAMQKIERFLIQPEIEKLVLDRSRPIER--PMMTWQAMFLQMGFSPVTH 509
Query: 317 SDEVCDDVRALLRRYK-EGWSMAQCPDAGIFLSWKDHTVVWASAWR 361
S+ L++R G+ + + ++ + L W+ +V SAWR
Sbjct: 510 SNFTESQAECLVQRTPVRGFHVEKKHNS-LLLCWQRTELVGVSAWR 554
Score = 38 (18.4 bits), Expect = 4.8e-05, Sum P(2) = 4.8e-05
Identities = 10/47 (21%), Positives = 25/47 (53%)
Query: 185 RSDEALAINCIGALHTIAAVDDRRDVLISNLRSLQPRIITVVEEEVD 231
R+D + +LH+ A+ + D + +NL ++Q +++ E++
Sbjct: 432 RTDLPFSQQLAHSLHSHTALFESLDAVNANLDAMQKIERFLIQPEIE 478
>TAIR|locus:1009023400 [details] [associations]
symbol:AT5G67411 "AT5G67411" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] Pfam:PF03514 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0006355 GO:GO:0006351 EMBL:AB007645
InterPro:IPR005202 PROSITE:PS50985 EMBL:DQ487622 IPI:IPI00657013
RefSeq:NP_001032167.1 UniGene:At.65711 EnsemblPlants:AT5G67411.1
GeneID:3771574 KEGG:ath:AT5G67411 TAIR:At5g67411 eggNOG:NOG309215
PhylomeDB:Q2V2T9 Genevestigator:Q2V2T9 Uniprot:Q2V2T9
Length = 202
Score = 141 (54.7 bits), Expect = 4.1e-08, P = 4.1e-08
Identities = 50/210 (23%), Positives = 91/210 (43%)
Query: 101 QWPTLLEALATRTDDTPH--LRLTTVVTSKPVXXXXXXXXXXVQKVMKEIGNRMEKFARL 158
Q PTL++++A + P L+LT + + +E+G+++ FA
Sbjct: 2 QIPTLIDSMANKLHKKPPPLLKLTVIASDAEFHPPPLLGISY-----EELGSKLVNFATT 56
Query: 159 MGVPFEFNVIHH-VGDLCDLNLAELDVRS---DEALAINCIGALHTIA---AVDDRRDVL 211
V EF +I D + +L + +EAL +NC LH I + R V
Sbjct: 57 RNVAMEFRIISSSYSDGLSSLIEQLRIDPFVFNEALVVNCHMMLHYIPDEILTSNLRSVF 116
Query: 212 ISNLRSLQPRIITVVEEEVDLDVGIDGLEFVKGFQECLRWFRVYFESLDESFTKTSNERL 271
+ LR L P I+T+++E+ D F+ + + + +++ + T+ S +R
Sbjct: 117 LKELRDLNPTIVTLIDEDSDFT----STNFISRLRSLYNYMWIPYDTAEMFLTRGSEQRQ 172
Query: 272 MLERAAGRAIVDLVACQPSESTERRETATR 301
E I ++VA + +E ER E +R
Sbjct: 173 WYEADISWKIDNVVAKEGAERVERLEPKSR 202
>UNIPROTKB|Q6DLS1 [details] [associations]
symbol:SCL1 "SCARECROW-like protein" species:3708 "Brassica
napus" [GO:0005515 "protein binding" evidence=IPI] Pfam:PF03514
GO:GO:0006355 GO:GO:0006351 InterPro:IPR005202 PROSITE:PS50985
EMBL:AY664405 IntAct:Q6DLS1 Uniprot:Q6DLS1
Length = 461
Score = 151 (58.2 bits), Expect = 8.3e-08, P = 8.3e-08
Identities = 75/364 (20%), Positives = 142/364 (39%)
Query: 4 LNE-LSSPYGDTDQKLSSYFLQALFGRMTDSGERCYRTLSSASDKTCSFESTRKMVLKFQ 62
LN+ L + G Q+ + YF +AL +T + L S SD + ++ F
Sbjct: 125 LNQRLQTSAGRPLQRAAFYFKEALGSLLTGTNRN---QLFSWSDIVQKIRAIKE----FS 177
Query: 63 EVSPWTTFGHVACNGAIMEAFEGESK---LHIVDISNTYCTQWPTLLEALATRTDDTPHL 119
+SP F H N AI+++ +S +H+VD + Q+ +L+ +A ++ + L
Sbjct: 178 GISPIPLFSHFTANQAILDSLSSQSSSPFVHVVDFEIGFGGQYASLMREIAEKSANGGFL 237
Query: 120 RLTTVVTSKPVXXXXXXXXXXVQKVMKEIGNRMEKFARLMGVPFEFN-VIHHVGDLCDLN 178
R+T VV +++KE + +FA M + F+ V+ ++
Sbjct: 238 RVTAVVAEDCAVET---------RLVKE---NLTQFAAEMKIRFQIEFVLMKTFEILSFK 285
Query: 179 LAELDVRSDEALAINCIGALHTIAAVDDRRDVLISNLRSLQPRIITVVEEEVDLDVGIDG 238
V + + + + + + ++NL + P ++ V+ E + G
Sbjct: 286 AIRF-VDGERTVVLISPAIFRRVIGIAE----FVNNLGRVSPNVVVFVDSEGCTETAGSG 340
Query: 239 LEFVKGFQECLRWFRVYFESLDESFTKTSNERLMLERAAGRAIVDLVACQPSESTERRET 298
F + F ++ + ESLD + + ++E R + A + + R
Sbjct: 341 -SFRREFVSAFEFYTMVLESLDAAAPPGDLVKKIVETFLLRPKIS--AAVETAANRRSAG 397
Query: 299 ATRWSGRLHGAGFSPFMFSDEVCDDVRALLRRYK-EGWSMAQCPDAGIFLSWKDHTVVWA 357
W L AG P S LL + + G+ +A+ + L W +V
Sbjct: 398 QMTWREMLCAAGMRPVQLSQFADFQAECLLEKAQVRGFHVAK-RQGELVLCWHGRALVAT 456
Query: 358 SAWR 361
SAWR
Sbjct: 457 SAWR 460
>UNIPROTKB|Q1AHE4 [details] [associations]
symbol:SCL "SCARECROW-like protein" species:4081 "Solanum
lycopersicum" [GO:0005515 "protein binding" evidence=IPI]
Pfam:PF03514 GO:GO:0006355 GO:GO:0006351 InterPro:IPR005202
PROSITE:PS50985 EMBL:DQ087265 UniGene:Les.23827 Uniprot:Q1AHE4
Length = 71
Score = 110 (43.8 bits), Expect = 9.9e-06, P = 9.9e-06
Identities = 23/70 (32%), Positives = 36/70 (51%)
Query: 291 ESTERRETATRWSGRLHGAGFSPFMFSDEVCDDVRALLRRYKEGWSMAQCPDAGIFLSWK 350
E ER E +W R AGF + S V +++L+R Y E +++ + D + L WK
Sbjct: 2 ERVERHELLGKWKLRFTMAGFHQYPLSSYVNSVIKSLMRCYSEHYTLVE-KDGAMLLGWK 60
Query: 351 DHTVVWASAW 360
++ ASAW
Sbjct: 61 KRNLISASAW 70
>TAIR|locus:2055622 [details] [associations]
symbol:HAM1 "AT2G45160" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0010492 "maintenance of shoot apical meristem
identity" evidence=IGI] [GO:0030154 "cell differentiation"
evidence=IMP] [GO:0048768 "root hair cell tip growth" evidence=IMP]
[GO:0051301 "cell division" evidence=IMP] Pfam:PF03514
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0051301
GO:GO:0003700 GO:GO:0006351 GO:GO:0048768 GO:GO:0010492
InterPro:IPR005202 PROSITE:PS50985 HOGENOM:HOG000239326
ProtClustDB:CLSN2683334 EMBL:BT004053 EMBL:BT020591 IPI:IPI00534274
PIR:B84887 RefSeq:NP_182041.1 UniGene:At.27046 UniGene:At.67081
UniGene:At.74179 STRING:Q7XJM8 PaxDb:Q7XJM8 PRIDE:Q7XJM8
EnsemblPlants:AT2G45160.1 GeneID:819124 KEGG:ath:AT2G45160
GeneFarm:4226 TAIR:At2g45160 eggNOG:NOG320780 InParanoid:Q7XJM8
OMA:HRWIERS PhylomeDB:Q7XJM8 Genevestigator:Q7XJM8 Uniprot:Q7XJM8
Length = 640
Score = 132 (51.5 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 70/310 (22%), Positives = 127/310 (40%)
Query: 61 FQEVSPWTTFGHVACNGAIMEAFE--GESKLHIVDISNTYCTQWPTLLEALAT-----RT 113
F E SP+ F + N +I+E+ G ++HI+D Y QW +L++ LA+ R
Sbjct: 353 FSETSPFLQFVNFTANQSILESCNESGFDRIHIIDFDVGYGGQWSSLMQELASGVGGRRR 412
Query: 114 DDTPHLRLTTVVTSKPVXXXXXXXXXXVQKVMKEIGNRMEKFARLMGVPFEFNVIHHVGD 173
+ L+LT V P ++ +K FA + +PFE ++ V
Sbjct: 413 NRASSLKLT-VFAPPPSTVSDEFELRFTEENLKT-------FAGEVKIPFEIELLS-VEL 463
Query: 174 LCDLNLAELDVRSDE--ALAINCIGALHTIAAVDDRRDVLISNLRSLQPRIITVVEEEVD 231
L + L +RS E A+A+N ++++A+ +++ L+ L P I+ + D
Sbjct: 464 LLNPAYWPLSLRSSEKEAIAVNL--PVNSVAS--GYLPLILRFLKQLSPNIVVCSDRGCD 519
Query: 232 LDVGIDGLEFVKGFQECLRWFRVYFESLDESFTKTSNERLMLERAAGRAIVDLVACQPSE 291
+ D F L++ ESLD + + + +ER + ++ + +
Sbjct: 520 RN---DA-PFPNAVIHSLQYHTSLLESLDANQNQDDSS---IERFWVQPSIEKLLMKRHR 572
Query: 292 STERRETATRWSGRLHGAGFSPFMFSDEVCDDVRALLRRYKEGWSMAQCPDAGIFLSWKD 351
ER + W GFSP S LL+R + + + + W+
Sbjct: 573 WIER---SPPWRILFTQCGFSPASLSQMAEAQAECLLQRNPVRGFHVEKRQSSLVMCWQR 629
Query: 352 HTVVWASAWR 361
+V SAW+
Sbjct: 630 KELVTVSAWK 639
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.134 0.416 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 362 352 0.00078 117 3 11 22 0.50 33
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 34
No. of states in DFA: 623 (66 KB)
Total size of DFA: 260 KB (2138 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 29.17u 0.12s 29.29t Elapsed: 00:00:02
Total cpu time: 29.18u 0.12s 29.30t Elapsed: 00:00:02
Start: Fri May 10 12:02:36 2013 End: Fri May 10 12:02:38 2013