Query 035867
Match_columns 362
No_of_seqs 120 out of 681
Neff 6.7
Searched_HMMs 29240
Date Mon Mar 25 11:50:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/035867.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/035867hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gek_A TRNA (CMO5U34)-methyltr 97.3 0.0057 2E-07 56.6 15.4 105 88-228 71-179 (261)
2 3dtn_A Putative methyltransfer 95.2 0.19 6.4E-06 44.3 11.7 112 77-226 33-146 (234)
3 3dh0_A SAM dependent methyltra 95.1 0.96 3.3E-05 39.1 15.8 113 77-226 27-141 (219)
4 4a6d_A Hydroxyindole O-methylt 94.7 0.2 7E-06 48.0 11.3 118 76-231 168-287 (353)
5 3bkx_A SAM-dependent methyltra 94.5 1.1 3.7E-05 40.3 15.2 124 77-230 33-162 (275)
6 3mgg_A Methyltransferase; NYSG 93.8 1.4 4.7E-05 39.8 14.3 103 86-226 36-140 (276)
7 2r3s_A Uncharacterized protein 93.8 1.1 3.7E-05 41.7 13.9 115 77-229 153-273 (335)
8 3dp7_A SAM-dependent methyltra 93.7 0.59 2E-05 44.7 12.1 115 78-228 170-288 (363)
9 3htx_A HEN1; HEN1, small RNA m 93.0 0.83 2.8E-05 49.3 12.6 123 77-229 711-836 (950)
10 3dlc_A Putative S-adenosyl-L-m 92.6 0.76 2.6E-05 39.4 10.2 112 75-226 32-146 (219)
11 1vl5_A Unknown conserved prote 92.3 3 0.0001 37.1 14.0 109 78-226 28-138 (260)
12 3kkz_A Uncharacterized protein 91.3 4.4 0.00015 36.2 14.0 126 61-226 19-148 (267)
13 3gu3_A Methyltransferase; alph 90.6 6.5 0.00022 35.7 14.7 103 86-226 21-124 (284)
14 2ip2_A Probable phenazine-spec 90.5 5 0.00017 37.2 14.1 115 77-229 158-274 (334)
15 3m70_A Tellurite resistance pr 90.2 2.3 7.9E-05 38.6 11.1 111 77-226 110-221 (286)
16 3vc1_A Geranyl diphosphate 2-C 90.1 4.8 0.00016 37.1 13.4 109 78-226 107-219 (312)
17 3ujc_A Phosphoethanolamine N-m 89.6 2.4 8.1E-05 37.5 10.5 123 66-226 34-157 (266)
18 3mcz_A O-methyltransferase; ad 89.3 7.7 0.00026 36.2 14.4 115 78-228 169-288 (352)
19 2aot_A HMT, histamine N-methyl 89.0 2.1 7.3E-05 39.2 10.0 113 86-226 51-170 (292)
20 4fsd_A Arsenic methyltransfera 89.0 6 0.0002 37.9 13.6 112 87-226 83-201 (383)
21 3f4k_A Putative methyltransfer 88.8 7.1 0.00024 34.3 13.1 126 61-226 19-148 (257)
22 3jwh_A HEN1; methyltransferase 88.2 2.8 9.6E-05 36.2 9.8 114 78-227 20-140 (217)
23 3jwg_A HEN1, methyltransferase 88.0 4.1 0.00014 35.1 10.7 120 77-232 19-145 (219)
24 3g5l_A Putative S-adenosylmeth 87.7 7.6 0.00026 34.2 12.5 111 75-226 32-143 (253)
25 3ofk_A Nodulation protein S; N 87.4 5.8 0.0002 34.0 11.3 110 78-226 42-152 (216)
26 1xxl_A YCGJ protein; structura 87.1 15 0.0005 32.2 14.0 111 76-226 10-122 (239)
27 3gwz_A MMCR; methyltransferase 87.0 9.8 0.00033 36.1 13.6 113 77-228 192-308 (369)
28 1nkv_A Hypothetical protein YJ 86.7 7.2 0.00025 34.2 11.8 111 76-226 25-138 (256)
29 1kpg_A CFA synthase;, cyclopro 86.7 4.2 0.00014 36.7 10.4 110 77-226 54-166 (287)
30 2xvm_A Tellurite resistance pr 85.5 7.7 0.00026 32.4 10.9 111 76-225 21-133 (199)
31 1wzn_A SAM-dependent methyltra 85.5 7.2 0.00025 34.2 11.1 110 79-227 33-144 (252)
32 2qe6_A Uncharacterized protein 85.3 22 0.00074 32.3 15.5 136 58-226 44-194 (274)
33 1y8c_A S-adenosylmethionine-de 85.2 4 0.00014 35.5 9.1 103 87-227 37-141 (246)
34 3bus_A REBM, methyltransferase 85.0 9.9 0.00034 33.8 11.9 111 77-226 51-164 (273)
35 2o57_A Putative sarcosine dime 84.9 11 0.00039 33.9 12.5 111 77-226 68-185 (297)
36 3g5t_A Trans-aconitate 3-methy 84.4 8.1 0.00028 35.2 11.3 111 86-226 35-147 (299)
37 3r0q_C Probable protein argini 84.4 4.9 0.00017 38.6 10.1 113 77-227 53-168 (376)
38 3uwp_A Histone-lysine N-methyl 84.3 7.7 0.00026 38.5 11.4 126 74-226 160-286 (438)
39 3hem_A Cyclopropane-fatty-acyl 83.9 8.6 0.00029 35.0 11.2 112 77-226 62-181 (302)
40 1ve3_A Hypothetical protein PH 83.2 14 0.00046 31.6 11.7 101 88-226 39-140 (227)
41 3mq2_A 16S rRNA methyltransfer 83.0 2.7 9.1E-05 36.4 6.9 116 79-227 19-139 (218)
42 4htf_A S-adenosylmethionine-de 82.4 9.5 0.00033 34.3 10.8 109 79-227 61-172 (285)
43 4e2x_A TCAB9; kijanose, tetron 82.4 3.3 0.00011 40.0 7.9 110 77-227 97-207 (416)
44 2fk8_A Methoxy mycolic acid sy 82.3 9.8 0.00034 34.9 11.0 110 77-226 80-192 (318)
45 3giw_A Protein of unknown func 81.9 19 0.00064 33.5 12.5 150 51-226 38-198 (277)
46 3bgv_A MRNA CAP guanine-N7 met 81.6 17 0.00059 33.2 12.4 114 87-226 34-153 (313)
47 3p9c_A Caffeic acid O-methyltr 81.5 3.5 0.00012 39.4 7.7 43 77-126 190-233 (364)
48 2vdw_A Vaccinia virus capping 80.5 24 0.00081 32.7 12.9 109 88-226 49-167 (302)
49 3ccf_A Cyclopropane-fatty-acyl 80.5 13 0.00043 33.4 10.8 105 77-226 47-152 (279)
50 3g2m_A PCZA361.24; SAM-depende 80.1 4.6 0.00016 36.9 7.7 112 76-227 72-189 (299)
51 3lcv_B Sisomicin-gentamicin re 80.0 8 0.00027 36.1 9.2 134 78-260 125-259 (281)
52 3lcc_A Putative methyl chlorid 79.8 15 0.00051 31.8 10.8 99 89-226 68-169 (235)
53 2yqz_A Hypothetical protein TT 79.4 22 0.00075 31.0 11.9 102 86-227 38-140 (263)
54 2yxd_A Probable cobalt-precorr 79.1 20 0.00068 29.2 10.8 104 77-226 25-129 (183)
55 3hnr_A Probable methyltransfer 79.0 7.6 0.00026 33.2 8.4 42 77-127 35-76 (220)
56 3d2l_A SAM-dependent methyltra 78.8 15 0.00051 31.7 10.4 109 79-227 27-136 (243)
57 3pfg_A N-methyltransferase; N, 78.6 13 0.00043 33.0 10.0 98 88-227 51-150 (263)
58 1qzz_A RDMB, aclacinomycin-10- 78.3 14 0.00048 34.7 10.7 113 77-228 172-288 (374)
59 3ou2_A SAM-dependent methyltra 78.0 18 0.00061 30.6 10.5 108 76-226 34-144 (218)
60 3p9n_A Possible methyltransfer 78.0 15 0.00051 30.8 9.9 109 87-231 44-156 (189)
61 3h2b_A SAM-dependent methyltra 77.7 7.1 0.00024 33.0 7.8 97 88-226 42-139 (203)
62 3bkw_A MLL3908 protein, S-aden 77.2 29 0.00099 29.8 11.9 109 77-226 33-142 (243)
63 3frh_A 16S rRNA methylase; met 77.1 12 0.0004 34.5 9.3 99 88-226 106-204 (253)
64 3lst_A CALO1 methyltransferase 76.9 12 0.00042 35.0 9.8 43 77-126 174-216 (348)
65 3reo_A (ISO)eugenol O-methyltr 76.6 9.9 0.00034 36.2 9.2 43 77-126 192-235 (368)
66 3sm3_A SAM-dependent methyltra 76.3 12 0.00041 32.1 8.9 102 88-226 31-139 (235)
67 3thr_A Glycine N-methyltransfe 75.7 9.4 0.00032 34.4 8.4 121 77-226 47-173 (293)
68 2p7i_A Hypothetical protein; p 74.4 17 0.00059 31.2 9.5 105 78-226 32-139 (250)
69 1fp2_A Isoflavone O-methyltran 74.1 20 0.00069 33.5 10.6 33 87-126 188-220 (352)
70 3e8s_A Putative SAM dependent 73.3 19 0.00067 30.4 9.5 44 75-127 40-83 (227)
71 2p35_A Trans-aconitate 2-methy 73.3 13 0.00046 32.4 8.6 106 78-226 24-130 (259)
72 2p8j_A S-adenosylmethionine-de 73.0 21 0.0007 30.1 9.5 102 88-226 24-126 (209)
73 1x19_A CRTF-related protein; m 73.0 21 0.0007 33.5 10.3 114 76-228 179-296 (359)
74 4dcm_A Ribosomal RNA large sub 72.9 21 0.00073 34.2 10.5 117 75-226 210-332 (375)
75 3i9f_A Putative type 11 methyl 72.7 27 0.00091 28.3 9.9 41 78-127 8-48 (170)
76 3hm2_A Precorrin-6Y C5,15-meth 72.5 37 0.0013 27.5 11.4 44 77-127 15-58 (178)
77 2y1w_A Histone-arginine methyl 72.4 18 0.00062 34.0 9.8 114 76-227 39-154 (348)
78 1dus_A MJ0882; hypothetical pr 72.2 37 0.0013 27.7 10.8 113 75-227 40-156 (194)
79 3l8d_A Methyltransferase; stru 71.9 33 0.0011 29.5 10.8 99 87-226 53-151 (242)
80 3e23_A Uncharacterized protein 69.6 24 0.00083 29.8 9.2 96 88-227 44-140 (211)
81 3g07_A 7SK snRNA methylphospha 69.5 8.7 0.0003 35.1 6.6 42 79-127 36-79 (292)
82 1fp1_D Isoliquiritigenin 2'-O- 68.8 34 0.0012 32.2 10.9 43 77-126 198-241 (372)
83 1xtp_A LMAJ004091AAA; SGPP, st 68.5 31 0.001 29.9 9.9 113 76-226 82-195 (254)
84 3fzg_A 16S rRNA methylase; met 68.2 8.3 0.00028 34.2 5.8 97 90-226 52-150 (200)
85 1tw3_A COMT, carminomycin 4-O- 67.8 36 0.0012 31.6 10.8 114 77-229 173-290 (360)
86 3ocj_A Putative exported prote 67.8 22 0.00076 32.3 9.1 105 87-226 118-225 (305)
87 3i53_A O-methyltransferase; CO 67.6 20 0.00067 33.2 8.8 110 80-228 162-275 (332)
88 2fyt_A Protein arginine N-meth 67.4 32 0.0011 32.3 10.3 112 77-226 54-169 (340)
89 3u81_A Catechol O-methyltransf 67.2 27 0.00091 30.1 9.1 105 88-227 59-169 (221)
90 2gb4_A Thiopurine S-methyltran 65.5 72 0.0025 28.4 11.9 33 86-127 67-99 (252)
91 3ege_A Putative methyltransfer 63.8 34 0.0012 30.2 9.3 43 76-127 23-65 (261)
92 3ftd_A Dimethyladenosine trans 63.5 36 0.0012 30.5 9.5 43 77-127 21-63 (249)
93 2qn6_B Translation initiation 63.3 8.1 0.00028 30.0 4.2 42 115-166 50-91 (93)
94 1ri5_A MRNA capping enzyme; me 63.3 50 0.0017 29.2 10.4 108 87-226 64-172 (298)
95 2g72_A Phenylethanolamine N-me 62.4 43 0.0015 30.0 9.9 22 296-317 233-254 (289)
96 3q7e_A Protein arginine N-meth 62.4 62 0.0021 30.3 11.3 114 77-227 56-172 (349)
97 1pjz_A Thiopurine S-methyltran 62.2 37 0.0013 28.9 8.9 32 87-127 22-53 (203)
98 3fut_A Dimethyladenosine trans 61.7 32 0.0011 31.5 8.8 42 77-128 37-78 (271)
99 3e05_A Precorrin-6Y C5,15-meth 60.9 73 0.0025 26.6 11.2 44 77-127 30-73 (204)
100 2kw5_A SLR1183 protein; struct 60.6 72 0.0025 26.5 11.8 98 90-227 32-130 (202)
101 2fpo_A Methylase YHHF; structu 60.5 28 0.00094 29.7 7.8 102 89-229 56-161 (202)
102 1jsx_A Glucose-inhibited divis 60.4 34 0.0012 28.7 8.3 96 89-227 67-164 (207)
103 3iv6_A Putative Zn-dependent a 59.6 17 0.00059 33.2 6.6 42 77-127 35-76 (261)
104 3dmg_A Probable ribosomal RNA 59.2 55 0.0019 31.4 10.4 117 75-227 215-339 (381)
105 1g6q_1 HnRNP arginine N-methyl 58.2 71 0.0024 29.6 10.8 113 77-226 28-143 (328)
106 3eey_A Putative rRNA methylase 57.6 45 0.0015 27.7 8.5 108 89-226 24-137 (197)
107 3b3j_A Histone-arginine methyl 57.5 25 0.00084 35.0 7.8 113 77-227 148-262 (480)
108 1nv8_A HEMK protein; class I a 56.9 71 0.0024 29.0 10.4 109 88-228 124-249 (284)
109 2ex4_A Adrenal gland protein A 56.3 74 0.0025 27.4 10.1 115 75-226 62-183 (241)
110 3cc8_A Putative methyltransfer 56.3 88 0.003 26.1 11.1 42 76-127 22-63 (230)
111 2ift_A Putative methylase HI07 56.2 40 0.0014 28.6 8.1 102 89-228 55-163 (201)
112 2gs9_A Hypothetical protein TT 55.9 89 0.003 26.1 10.3 101 79-226 29-130 (211)
113 1uwv_A 23S rRNA (uracil-5-)-me 55.8 1.2E+02 0.004 29.4 12.3 108 79-226 278-387 (433)
114 1yzh_A TRNA (guanine-N(7)-)-me 55.0 96 0.0033 26.2 10.9 109 87-227 41-155 (214)
115 4hg2_A Methyltransferase type 53.6 90 0.0031 27.9 10.3 91 90-226 42-133 (257)
116 3grz_A L11 mtase, ribosomal pr 53.0 63 0.0022 27.0 8.8 46 74-127 45-92 (205)
117 3p2e_A 16S rRNA methylase; met 51.8 50 0.0017 28.8 8.1 110 87-226 24-137 (225)
118 3ggd_A SAM-dependent methyltra 51.5 27 0.00093 30.3 6.3 104 88-227 57-163 (245)
119 3tfw_A Putative O-methyltransf 51.4 41 0.0014 29.6 7.6 102 88-227 64-169 (248)
120 2a14_A Indolethylamine N-methy 51.3 74 0.0025 28.1 9.3 40 187-226 155-195 (263)
121 2pxx_A Uncharacterized protein 49.8 79 0.0027 26.2 8.9 33 87-127 42-74 (215)
122 3bxo_A N,N-dimethyltransferase 48.4 1.2E+02 0.0042 25.5 11.7 100 86-227 39-140 (239)
123 4hc4_A Protein arginine N-meth 48.4 67 0.0023 30.9 9.0 100 90-225 86-186 (376)
124 2jjq_A Uncharacterized RNA met 45.9 2.1E+02 0.0073 27.6 12.3 95 89-227 292-386 (425)
125 1zq9_A Probable dimethyladenos 45.2 93 0.0032 28.2 9.1 42 77-127 18-59 (285)
126 4azs_A Methyltransferase WBDD; 44.9 37 0.0013 34.3 6.8 83 87-203 66-149 (569)
127 3njr_A Precorrin-6Y methylase; 44.3 1.4E+02 0.0049 25.1 12.5 105 77-226 45-152 (204)
128 3tqs_A Ribosomal RNA small sub 43.3 1.1E+02 0.0039 27.4 9.2 42 77-127 19-60 (255)
129 2h1r_A Dimethyladenosine trans 42.7 1.1E+02 0.0037 27.9 9.2 43 76-127 31-73 (299)
130 1dl5_A Protein-L-isoaspartate 41.7 1.7E+02 0.0058 26.6 10.5 46 76-127 64-109 (317)
131 2pjd_A Ribosomal RNA small sub 41.6 32 0.0011 32.1 5.5 116 75-226 184-301 (343)
132 1xdz_A Methyltransferase GIDB; 41.4 96 0.0033 26.8 8.3 99 88-227 71-173 (240)
133 1u2z_A Histone-lysine N-methyl 40.9 1.6E+02 0.0055 28.8 10.6 45 77-128 232-276 (433)
134 3g89_A Ribosomal RNA small sub 40.5 56 0.0019 29.0 6.7 102 86-226 79-182 (249)
135 3dxy_A TRNA (guanine-N(7)-)-me 39.9 76 0.0026 27.5 7.3 110 87-227 34-149 (218)
136 3lbf_A Protein-L-isoaspartate 39.7 1.6E+02 0.0055 24.4 9.5 42 77-127 67-108 (210)
137 1wy7_A Hypothetical protein PH 39.5 1.6E+02 0.0055 24.3 11.7 93 87-219 49-141 (207)
138 3dli_A Methyltransferase; PSI- 37.4 49 0.0017 28.6 5.6 31 88-127 42-72 (240)
139 3orh_A Guanidinoacetate N-meth 37.4 64 0.0022 28.1 6.5 103 87-226 60-168 (236)
140 1vlm_A SAM-dependent methyltra 37.3 1.6E+02 0.0056 24.7 9.0 22 296-317 165-186 (219)
141 3gru_A Dimethyladenosine trans 36.8 1E+02 0.0035 28.4 8.0 43 77-128 40-82 (295)
142 1xj5_A Spermidine synthase 1; 36.6 2.6E+02 0.009 25.9 11.0 113 88-228 121-235 (334)
143 2i62_A Nicotinamide N-methyltr 36.5 1.7E+02 0.0057 25.1 9.1 35 85-127 54-88 (265)
144 2gpy_A O-methyltransferase; st 36.2 78 0.0027 27.1 6.8 32 89-127 56-87 (233)
145 3lpm_A Putative methyltransfer 35.0 2.2E+02 0.0074 24.8 9.7 109 87-226 49-174 (259)
146 2esr_A Methyltransferase; stru 33.5 1.5E+02 0.0052 23.8 7.9 103 88-229 32-139 (177)
147 2ipx_A RRNA 2'-O-methyltransfe 33.4 1.8E+02 0.0061 24.8 8.7 34 88-127 78-111 (233)
148 1zx0_A Guanidinoacetate N-meth 32.9 1.7E+02 0.0057 25.0 8.4 34 86-127 59-92 (236)
149 2kl8_A OR15; structural genomi 32.1 88 0.003 22.6 5.1 35 117-167 42-76 (85)
150 2avn_A Ubiquinone/menaquinone 31.0 2.6E+02 0.0089 24.2 11.1 32 87-127 54-85 (260)
151 1ne2_A Hypothetical protein TA 30.3 1.5E+02 0.0051 24.5 7.5 33 87-127 51-83 (200)
152 3uzu_A Ribosomal RNA small sub 29.6 2.2E+02 0.0074 25.8 8.9 46 77-127 32-77 (279)
153 4dzr_A Protein-(glutamine-N5) 29.6 39 0.0013 28.1 3.5 45 77-128 19-64 (215)
154 1l3i_A Precorrin-6Y methyltran 29.5 2.1E+02 0.0073 22.7 8.3 41 78-127 24-64 (192)
155 2qm3_A Predicted methyltransfe 29.1 2.8E+02 0.0095 25.9 9.9 97 88-222 173-271 (373)
156 3tm4_A TRNA (guanine N2-)-meth 28.7 2.4E+02 0.0083 26.4 9.4 108 86-226 216-329 (373)
157 1yz7_A Probable translation in 28.7 74 0.0025 27.7 5.1 44 115-168 133-176 (188)
158 1o9g_A RRNA methyltransferase; 28.4 94 0.0032 27.0 6.0 45 79-128 43-87 (250)
159 4a69_A Histone deacetylase 3,; 28.0 34 0.0011 33.2 3.1 23 78-100 153-175 (376)
160 3q87_B N6 adenine specific DNA 27.9 67 0.0023 26.3 4.7 28 90-127 26-53 (170)
161 2yxe_A Protein-L-isoaspartate 27.7 1.3E+02 0.0043 25.2 6.5 44 78-127 68-111 (215)
162 3max_A HD2, histone deacetylas 27.0 36 0.0012 32.9 3.1 23 78-100 153-175 (367)
163 3id6_C Fibrillarin-like rRNA/T 26.9 3.2E+02 0.011 24.0 11.1 45 77-127 63-110 (232)
164 3tr6_A O-methyltransferase; ce 26.6 77 0.0026 26.8 5.0 33 89-127 66-98 (225)
165 3ghf_A Septum site-determining 25.9 1.3E+02 0.0044 24.0 5.8 33 89-126 49-82 (120)
166 3mti_A RRNA methylase; SAM-dep 25.8 1.5E+02 0.005 24.1 6.5 29 90-127 25-53 (185)
167 3tma_A Methyltransferase; thum 25.8 1.9E+02 0.0065 26.7 7.9 113 79-222 195-311 (354)
168 3ew8_A HD8, histone deacetylas 25.6 39 0.0013 32.9 3.1 23 78-100 161-183 (388)
169 1o54_A SAM-dependent O-methylt 25.0 2.3E+02 0.0078 24.9 8.0 45 77-127 102-146 (277)
170 1qam_A ERMC' methyltransferase 22.1 76 0.0026 28.0 4.1 43 76-127 19-61 (244)
171 2nxc_A L11 mtase, ribosomal pr 21.9 1.5E+02 0.0052 26.0 6.1 32 88-128 121-152 (254)
172 3duw_A OMT, O-methyltransferas 21.5 1.2E+02 0.0041 25.6 5.2 34 88-127 59-92 (223)
173 3ckk_A TRNA (guanine-N(7)-)-me 21.0 1.9E+02 0.0064 25.2 6.5 36 85-127 44-79 (235)
174 1ws6_A Methyltransferase; stru 20.9 1.7E+02 0.0059 23.0 5.8 31 88-127 42-72 (171)
175 3cgg_A SAM-dependent methyltra 20.8 3.2E+02 0.011 21.7 10.3 41 77-127 37-77 (195)
176 3dr5_A Putative O-methyltransf 20.7 1.2E+02 0.0042 26.2 5.1 43 79-127 48-90 (221)
177 2h00_A Methyltransferase 10 do 20.6 1.6E+02 0.0055 25.4 6.0 34 87-127 65-98 (254)
178 2avd_A Catechol-O-methyltransf 20.2 3.1E+02 0.01 22.9 7.6 35 88-128 70-104 (229)
179 1vbf_A 231AA long hypothetical 20.2 3.8E+02 0.013 22.3 9.0 42 77-127 60-101 (231)
180 2vdv_E TRNA (guanine-N(7)-)-me 20.1 4.1E+02 0.014 22.7 11.2 34 87-127 49-82 (246)
181 3opn_A Putative hemolysin; str 20.0 1.6E+02 0.0054 25.8 5.8 56 65-129 15-71 (232)
No 1
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=97.32 E-value=0.0057 Score=56.64 Aligned_cols=105 Identities=13% Similarity=0.270 Sum_probs=64.0
Q ss_pred eeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHcCC--cEEE
Q 035867 88 KLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTSKPVGGSGAGGLAAVQKVMKEIGNRMEKFARLMGV--PFEF 165 (362)
Q Consensus 88 ~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~~~~~~~~~~~~~~~~~~l~etg~rL~~fA~~~gv--pfeF 165 (362)
.-+|+|+|.|.|. +...|+.+- +.|..+||||+.+. ..|+.+.+++. ..|. +.+|
T Consensus 71 ~~~vLDlGcGtG~----~~~~la~~~-~~~~~~v~gvD~s~--------------~ml~~A~~~~~----~~~~~~~v~~ 127 (261)
T 4gek_A 71 GTQVYDLGCSLGA----ATLSVRRNI-HHDNCKIIAIDNSP--------------AMIERCRRHID----AYKAPTPVDV 127 (261)
T ss_dssp TCEEEEETCTTTH----HHHHHHHTC-CSSSCEEEEEESCH--------------HHHHHHHHHHH----TSCCSSCEEE
T ss_pred CCEEEEEeCCCCH----HHHHHHHhc-CCCCCEEEEEECCH--------------HHHHHHHHHHH----hhccCceEEE
Confidence 4479999999884 556666653 34678999998653 34655555543 3343 4555
Q ss_pred EEeeccCCcccCccccccccCCCeEEEeccccccccccccCcHHHHHHHH-HhcCCcEEEE-Ecc
Q 035867 166 NVIHHVGDLCDLNLAELDVRSDEALAINCIGALHTIAAVDDRRDVLISNL-RSLQPRIITV-VEE 228 (362)
Q Consensus 166 ~~v~~~~~~e~l~~~~l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~vvvl-vE~ 228 (362)
+. .++.++... +-..++ |.+.||++.. ..+..+|+.| +.|+|.-.++ .|.
T Consensus 128 --~~--~D~~~~~~~-----~~d~v~--~~~~l~~~~~--~~~~~~l~~i~~~LkpGG~lii~e~ 179 (261)
T 4gek_A 128 --IE--GDIRDIAIE-----NASMVV--LNFTLQFLEP--SERQALLDKIYQGLNPGGALVLSEK 179 (261)
T ss_dssp --EE--SCTTTCCCC-----SEEEEE--EESCGGGSCH--HHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred --ee--ccccccccc-----ccccce--eeeeeeecCc--hhHhHHHHHHHHHcCCCcEEEEEec
Confidence 32 355554332 223444 4456788852 3456778766 6689987665 454
No 2
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=95.21 E-value=0.19 Score=44.35 Aligned_cols=112 Identities=16% Similarity=0.172 Sum_probs=63.8
Q ss_pred HHHHhhhc-CCCeeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccCCCCCCCCCCCchhHHHHHHHHHHHHHHH
Q 035867 77 GAIMEAFE-GESKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTSKPVGGSGAGGLAAVQKVMKEIGNRMEKF 155 (362)
Q Consensus 77 qaIleA~~-g~~~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~~~~~~~~~~~~~~~~~~l~etg~rL~~f 155 (362)
+.+++.+. ..+.-.|+|+|.|.|. +...|+.+. |..++|||+.+. ..++.+.+++
T Consensus 33 ~~~~~~~~~~~~~~~vLDiG~G~G~----~~~~l~~~~---~~~~v~~vD~s~--------------~~~~~a~~~~--- 88 (234)
T 3dtn_A 33 GVSVSIASVDTENPDILDLGAGTGL----LSAFLMEKY---PEATFTLVDMSE--------------KMLEIAKNRF--- 88 (234)
T ss_dssp HHHHHTCCCSCSSCEEEEETCTTSH----HHHHHHHHC---TTCEEEEEESCH--------------HHHHHHHHHT---
T ss_pred HHHHHHhhcCCCCCeEEEecCCCCH----HHHHHHHhC---CCCeEEEEECCH--------------HHHHHHHHhh---
Confidence 56667665 4556899999999884 444555442 457899998642 2343333332
Q ss_pred HHHcCCcEEEEEeeccCCcccCccccccccCCCeEEEeccccccccccccCcHHHHHHHH-HhcCCcEEEEE
Q 035867 156 ARLMGVPFEFNVIHHVGDLCDLNLAELDVRSDEALAINCIGALHTIAAVDDRRDVLISNL-RSLQPRIITVV 226 (362)
Q Consensus 156 A~~~gvpfeF~~v~~~~~~e~l~~~~l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~vvvlv 226 (362)
+..+ ..+|.. .+++++... +..=+|-|...+||+.. ..+..+|+.+ +.|+|.-.+++
T Consensus 89 -~~~~-~~~~~~----~d~~~~~~~------~~fD~v~~~~~l~~~~~--~~~~~~l~~~~~~LkpgG~l~~ 146 (234)
T 3dtn_A 89 -RGNL-KVKYIE----ADYSKYDFE------EKYDMVVSALSIHHLED--EDKKELYKRSYSILKESGIFIN 146 (234)
T ss_dssp -CSCT-TEEEEE----SCTTTCCCC------SCEEEEEEESCGGGSCH--HHHHHHHHHHHHHEEEEEEEEE
T ss_pred -ccCC-CEEEEe----CchhccCCC------CCceEEEEeCccccCCH--HHHHHHHHHHHHhcCCCcEEEE
Confidence 2223 444432 355554322 22333445567888842 2334566655 56899877664
No 3
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=95.06 E-value=0.96 Score=39.10 Aligned_cols=113 Identities=9% Similarity=0.142 Sum_probs=64.5
Q ss_pred HHHHhhhcCCCeeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccCCCCCCCCCCCchhHHHHHHHHHHHHHHHH
Q 035867 77 GAIMEAFEGESKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTSKPVGGSGAGGLAAVQKVMKEIGNRMEKFA 156 (362)
Q Consensus 77 qaIleA~~g~~~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~~~~~~~~~~~~~~~~~~l~etg~rL~~fA 156 (362)
+.|++.+.-...-.|+|+|.|.|.--..|.+.. +|..++|||+.+. ..++.+.+++
T Consensus 27 ~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~------~~~~~v~~vD~s~--------------~~~~~a~~~~---- 82 (219)
T 3dh0_A 27 EKVLKEFGLKEGMTVLDVGTGAGFYLPYLSKMV------GEKGKVYAIDVQE--------------EMVNYAWEKV---- 82 (219)
T ss_dssp HHHHHHHTCCTTCEEEESSCTTCTTHHHHHHHH------TTTCEEEEEESCH--------------HHHHHHHHHH----
T ss_pred HHHHHHhCCCCCCEEEEEecCCCHHHHHHHHHh------CCCcEEEEEECCH--------------HHHHHHHHHH----
Confidence 556666665556689999999986433333332 3556899998643 2344443333
Q ss_pred HHcCCc-EEEEEeeccCCcccCccccccccCCCeEEEeccccccccccccCcHHHHHHH-HHhcCCcEEEEE
Q 035867 157 RLMGVP-FEFNVIHHVGDLCDLNLAELDVRSDEALAINCIGALHTIAAVDDRRDVLISN-LRSLQPRIITVV 226 (362)
Q Consensus 157 ~~~gvp-feF~~v~~~~~~e~l~~~~l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~-ir~L~P~vvvlv 226 (362)
+..|++ ++|.. .+++++. ..++..=+|-+...+||+. + ...+|+. .+.|+|.-.+++
T Consensus 83 ~~~~~~~~~~~~----~d~~~~~-----~~~~~fD~v~~~~~l~~~~---~-~~~~l~~~~~~LkpgG~l~i 141 (219)
T 3dh0_A 83 NKLGLKNVEVLK----SEENKIP-----LPDNTVDFIFMAFTFHELS---E-PLKFLEELKRVAKPFAYLAI 141 (219)
T ss_dssp HHHTCTTEEEEE----CBTTBCS-----SCSSCEEEEEEESCGGGCS---S-HHHHHHHHHHHEEEEEEEEE
T ss_pred HHcCCCcEEEEe----cccccCC-----CCCCCeeEEEeehhhhhcC---C-HHHHHHHHHHHhCCCeEEEE
Confidence 344654 55533 2444432 2233233444555678883 3 3455554 567899876664
No 4
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=94.74 E-value=0.2 Score=47.96 Aligned_cols=118 Identities=15% Similarity=0.179 Sum_probs=63.7
Q ss_pred HHHHHhhhcCCCeeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccCCCCCCCCCCCchhHHHHHHHHHHHHHHH
Q 035867 76 NGAIMEAFEGESKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTSKPVGGSGAGGLAAVQKVMKEIGNRMEKF 155 (362)
Q Consensus 76 NqaIleA~~g~~~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~~~~~~~~~~~~~~~~~~l~etg~rL~~f 155 (362)
.+.|++++.-...-+|+|+|.|.|. ++.+|+.+. |.+|+|.++.| ..++.+.+++.
T Consensus 168 ~~~~~~~~~~~~~~~v~DvGgG~G~----~~~~l~~~~---p~~~~~~~dlp---------------~v~~~a~~~~~-- 223 (353)
T 4a6d_A 168 GRSVLTAFDLSVFPLMCDLGGGAGA----LAKECMSLY---PGCKITVFDIP---------------EVVWTAKQHFS-- 223 (353)
T ss_dssp HHHHHHSSCGGGCSEEEEETCTTSH----HHHHHHHHC---SSCEEEEEECH---------------HHHHHHHHHSC--
T ss_pred HHHHHHhcCcccCCeEEeeCCCCCH----HHHHHHHhC---CCceeEeccCH---------------HHHHHHHHhhh--
Confidence 4567777764455589999999995 566666653 67899988753 12333332221
Q ss_pred HHHcCCcEEEEEeeccCCcccCccccccccCCCeEEEeccccccccccccCcHHHHHHHH-HhcCCcEE-EEEccccc
Q 035867 156 ARLMGVPFEFNVIHHVGDLCDLNLAELDVRSDEALAINCIGALHTIAAVDDRRDVLISNL-RSLQPRII-TVVEEEVD 231 (362)
Q Consensus 156 A~~~gvpfeF~~v~~~~~~e~l~~~~l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~vv-vlvE~ea~ 231 (362)
....=..+|.. .+.-+ . .....++++ +...||+..+ .....+|+.+ +.|+|.-. +++|.-.+
T Consensus 224 -~~~~~rv~~~~----gD~~~--~---~~~~~D~~~--~~~vlh~~~d--~~~~~iL~~~~~al~pgg~lli~e~~~~ 287 (353)
T 4a6d_A 224 -FQEEEQIDFQE----GDFFK--D---PLPEADLYI--LARVLHDWAD--GKCSHLLERIYHTCKPGGGILVIESLLD 287 (353)
T ss_dssp -C--CCSEEEEE----SCTTT--S---CCCCCSEEE--EESSGGGSCH--HHHHHHHHHHHHHCCTTCEEEEEECCCC
T ss_pred -hcccCceeeec----Ccccc--C---CCCCceEEE--eeeecccCCH--HHHHHHHHHHHhhCCCCCEEEEEEeeeC
Confidence 11111255533 23211 0 122334444 3444688752 2234567665 66899764 44665443
No 5
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=94.55 E-value=1.1 Score=40.31 Aligned_cols=124 Identities=15% Similarity=0.137 Sum_probs=64.0
Q ss_pred HHHHhhhcCCCeeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccCCCCCCCCCCCchhHHHHHHHHHHHHHHHH
Q 035867 77 GAIMEAFEGESKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTSKPVGGSGAGGLAAVQKVMKEIGNRMEKFA 156 (362)
Q Consensus 77 qaIleA~~g~~~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~~~~~~~~~~~~~~~~~~l~etg~rL~~fA 156 (362)
..|++.+.-...-+|+|+|.|.|. +...|+.+- .|..++|||+.+.....+ ...++.+.+++
T Consensus 33 ~~l~~~~~~~~~~~vLDiGcG~G~----~~~~l~~~~--g~~~~v~gvD~s~~~~~~--------~~~~~~a~~~~---- 94 (275)
T 3bkx_A 33 LAIAEAWQVKPGEKILEIGCGQGD----LSAVLADQV--GSSGHVTGIDIASPDYGA--------PLTLGQAWNHL---- 94 (275)
T ss_dssp HHHHHHHTCCTTCEEEEESCTTSH----HHHHHHHHH--CTTCEEEEECSSCTTCCS--------SSCHHHHHHHH----
T ss_pred HHHHHHcCCCCCCEEEEeCCCCCH----HHHHHHHHh--CCCCEEEEEECCcccccc--------HHHHHHHHHHH----
Confidence 456666654555689999999885 344455442 244689999876531000 00133333332
Q ss_pred HHcCC--cEEEEEeeccCCcccCccccccccCC--CeEEEeccccccccccccCcHHHHHHHHHhcCC--cEEEEEcccc
Q 035867 157 RLMGV--PFEFNVIHHVGDLCDLNLAELDVRSD--EALAINCIGALHTIAAVDDRRDVLISNLRSLQP--RIITVVEEEV 230 (362)
Q Consensus 157 ~~~gv--pfeF~~v~~~~~~e~l~~~~l~~~~~--E~laVN~~~~Lh~l~~~~~~~~~~L~~ir~L~P--~vvvlvE~ea 230 (362)
+..|+ ..+|.. .+ +.....+...++ +.|+ |...+||+. ++ +.+++.++.+.| ..+++.|...
T Consensus 95 ~~~~~~~~v~~~~----~d--~~~~~~~~~~~~~fD~v~--~~~~l~~~~---~~-~~~~~~~~~l~~~gG~l~~~~~~~ 162 (275)
T 3bkx_A 95 LAGPLGDRLTVHF----NT--NLSDDLGPIADQHFDRVV--LAHSLWYFA---SA-NALALLFKNMAAVCDHVDVAEWSM 162 (275)
T ss_dssp HTSTTGGGEEEEC----SC--CTTTCCGGGTTCCCSEEE--EESCGGGSS---CH-HHHHHHHHHHTTTCSEEEEEEECS
T ss_pred HhcCCCCceEEEE----CC--hhhhccCCCCCCCEEEEE--EccchhhCC---CH-HHHHHHHHHHhCCCCEEEEEEecC
Confidence 33454 244422 22 111112222222 3444 445568874 22 458899999887 3555555443
No 6
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=93.84 E-value=1.4 Score=39.75 Aligned_cols=103 Identities=14% Similarity=0.167 Sum_probs=59.0
Q ss_pred CCeeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCc-EE
Q 035867 86 ESKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTSKPVGGSGAGGLAAVQKVMKEIGNRMEKFARLMGVP-FE 164 (362)
Q Consensus 86 ~~~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~~~~~~~~~~~~~~~~~~l~etg~rL~~fA~~~gvp-fe 164 (362)
.+.-+|+|+|.|.|. +...|+.+. |..++|||+.+. ..++.+.+ .++..|++ .+
T Consensus 36 ~~~~~vLDiG~G~G~----~~~~l~~~~---~~~~v~~vD~s~--------------~~~~~a~~----~~~~~~~~~~~ 90 (276)
T 3mgg_A 36 PPGAKVLEAGCGIGA----QTVILAKNN---PDAEITSIDISP--------------ESLEKARE----NTEKNGIKNVK 90 (276)
T ss_dssp CTTCEEEETTCTTSH----HHHHHHHHC---TTSEEEEEESCH--------------HHHHHHHH----HHHHTTCCSEE
T ss_pred CCCCeEEEecCCCCH----HHHHHHHhC---CCCEEEEEECCH--------------HHHHHHHH----HHHHcCCCCcE
Confidence 345689999999884 455566552 446899998642 23333333 33445654 44
Q ss_pred EEEeeccCCcccCccccccccCCCeEEEeccccccccccccCcHHHHHHHH-HhcCCcEEEEE
Q 035867 165 FNVIHHVGDLCDLNLAELDVRSDEALAINCIGALHTIAAVDDRRDVLISNL-RSLQPRIITVV 226 (362)
Q Consensus 165 F~~v~~~~~~e~l~~~~l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~vvvlv 226 (362)
|.. .++.++. ..++..=+|-+...|||+. + .+.+|+.+ +-|+|.-++++
T Consensus 91 ~~~----~d~~~~~-----~~~~~fD~v~~~~~l~~~~---~-~~~~l~~~~~~L~pgG~l~~ 140 (276)
T 3mgg_A 91 FLQ----ANIFSLP-----FEDSSFDHIFVCFVLEHLQ---S-PEEALKSLKKVLKPGGTITV 140 (276)
T ss_dssp EEE----CCGGGCC-----SCTTCEEEEEEESCGGGCS---C-HHHHHHHHHHHEEEEEEEEE
T ss_pred EEE----cccccCC-----CCCCCeeEEEEechhhhcC---C-HHHHHHHHHHHcCCCcEEEE
Confidence 432 2444432 2234344455556678884 2 34566655 66799877664
No 7
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=93.79 E-value=1.1 Score=41.73 Aligned_cols=115 Identities=17% Similarity=0.164 Sum_probs=65.9
Q ss_pred HHHHhhhcC--CCeeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccCCCCCCCCCCCchhHHHHHHHHHHHHHH
Q 035867 77 GAIMEAFEG--ESKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTSKPVGGSGAGGLAAVQKVMKEIGNRMEK 154 (362)
Q Consensus 77 qaIleA~~g--~~~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~~~~~~~~~~~~~~~~~~l~etg~rL~~ 154 (362)
..|++.+.. .+..+|+|+|.|.|. +...|+.+. |..++|+++.+ . .++...+++
T Consensus 153 ~~~~~~~~~~~~~~~~vlDvG~G~G~----~~~~l~~~~---p~~~~~~~D~~-~--------------~~~~a~~~~-- 208 (335)
T 2r3s_A 153 QLIAQLVNENKIEPLKVLDISASHGL----FGIAVAQHN---PNAEIFGVDWA-S--------------VLEVAKENA-- 208 (335)
T ss_dssp HHHHHHHTC--CCCSEEEEETCTTCH----HHHHHHHHC---TTCEEEEEECH-H--------------HHHHHHHHH--
T ss_pred HHHHHhcccccCCCCEEEEECCCcCH----HHHHHHHHC---CCCeEEEEecH-H--------------HHHHHHHHH--
Confidence 467777765 667899999999984 455555543 45799999864 2 344444443
Q ss_pred HHHHcCCc--EEEEEeeccCCcccCccccccccCCCeEEEeccccccccccccCcHHHHHHHH-HhcCCcE-EEEEccc
Q 035867 155 FARLMGVP--FEFNVIHHVGDLCDLNLAELDVRSDEALAINCIGALHTIAAVDDRRDVLISNL-RSLQPRI-ITVVEEE 229 (362)
Q Consensus 155 fA~~~gvp--feF~~v~~~~~~e~l~~~~l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~v-vvlvE~e 229 (362)
+..|++ .+|..- ++.+.. +..+ .=+|-|...||++.. .....+|+.+ +.|+|.- ++++|..
T Consensus 209 --~~~~~~~~v~~~~~----d~~~~~-----~~~~-~D~v~~~~~l~~~~~--~~~~~~l~~~~~~L~pgG~l~i~e~~ 273 (335)
T 2r3s_A 209 --RIQGVASRYHTIAG----SAFEVD-----YGND-YDLVLLPNFLHHFDV--ATCEQLLRKIKTALAVEGKVIVFDFI 273 (335)
T ss_dssp --HHHTCGGGEEEEES----CTTTSC-----CCSC-EEEEEEESCGGGSCH--HHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred --HhcCCCcceEEEec----ccccCC-----CCCC-CcEEEEcchhccCCH--HHHHHHHHHHHHhCCCCcEEEEEeec
Confidence 234553 566432 443321 1122 333445556788742 2234566655 5679987 4556644
No 8
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=93.68 E-value=0.59 Score=44.72 Aligned_cols=115 Identities=10% Similarity=0.075 Sum_probs=62.8
Q ss_pred HHHhhhcCCCeeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccCCCCCCCCCCCchhHHHHHHHHHHHHHHHHH
Q 035867 78 AIMEAFEGESKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTSKPVGGSGAGGLAAVQKVMKEIGNRMEKFAR 157 (362)
Q Consensus 78 aIleA~~g~~~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~~~~~~~~~~~~~~~~~~l~etg~rL~~fA~ 157 (362)
.+++.+.....-+|+|+|.|.|. +...|+.+. |.+++|+++.+ ..++...++ ++
T Consensus 170 ~~l~~~~~~~~~~vlDvG~G~G~----~~~~l~~~~---p~~~~~~~D~~---------------~~~~~a~~~----~~ 223 (363)
T 3dp7_A 170 KALEIVFSHHPKRLLDIGGNTGK----WATQCVQYN---KEVEVTIVDLP---------------QQLEMMRKQ----TA 223 (363)
T ss_dssp HHHHHHGGGCCSEEEEESCTTCH----HHHHHHHHS---TTCEEEEEECH---------------HHHHHHHHH----HT
T ss_pred HHHHHhcccCCCEEEEeCCCcCH----HHHHHHHhC---CCCEEEEEeCH---------------HHHHHHHHH----HH
Confidence 34555444456799999999985 455555542 56799999852 134333333 34
Q ss_pred HcCC--cEEEEEeeccCCcccCccccccccCCCeEEEeccccccccccccCcHHHHHHHH-HhcCCcEEEE-Ecc
Q 035867 158 LMGV--PFEFNVIHHVGDLCDLNLAELDVRSDEALAINCIGALHTIAAVDDRRDVLISNL-RSLQPRIITV-VEE 228 (362)
Q Consensus 158 ~~gv--pfeF~~v~~~~~~e~l~~~~l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~vvvl-vE~ 228 (362)
..|+ ..+|..- ++.+... .+. ..-++++ +...||++.+ .....+|+.+ +.|+|.-.++ +|.
T Consensus 224 ~~~~~~~v~~~~~----d~~~~~~-~~p-~~~D~v~--~~~vlh~~~~--~~~~~~l~~~~~~L~pgG~l~i~e~ 288 (363)
T 3dp7_A 224 GLSGSERIHGHGA----NLLDRDV-PFP-TGFDAVW--MSQFLDCFSE--EEVISILTRVAQSIGKDSKVYIMET 288 (363)
T ss_dssp TCTTGGGEEEEEC----CCCSSSC-CCC-CCCSEEE--EESCSTTSCH--HHHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred hcCcccceEEEEc----cccccCC-CCC-CCcCEEE--EechhhhCCH--HHHHHHHHHHHHhcCCCcEEEEEee
Confidence 4555 3566432 3333210 011 1223444 4445688752 2344567766 5689977654 554
No 9
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=92.95 E-value=0.83 Score=49.29 Aligned_cols=123 Identities=15% Similarity=0.198 Sum_probs=72.8
Q ss_pred HHHHhhhcCCCeeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccCCCCCCCCCCCchhHHHHHHHHHHHHHHH-
Q 035867 77 GAIMEAFEGESKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTSKPVGGSGAGGLAAVQKVMKEIGNRMEKF- 155 (362)
Q Consensus 77 qaIleA~~g~~~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~~~~~~~~~~~~~~~~~~l~etg~rL~~f- 155 (362)
+.|++.+.....-.|+|+|-|.| .+...|+.+ ++|.-++|||+.+. ..++.+.++|...
T Consensus 711 e~LLelL~~~~g~rVLDVGCGTG----~lai~LAr~--g~p~a~VtGVDIS~--------------emLe~AReRLa~~l 770 (950)
T 3htx_A 711 EYALKHIRESSASTLVDFGCGSG----SLLDSLLDY--PTSLQTIIGVDISP--------------KGLARAAKMLHVKL 770 (950)
T ss_dssp HHHHHHHHHSCCSEEEEETCSSS----HHHHHHTSS--CCCCCEEEEEESCH--------------HHHHHHHHHHHHHT
T ss_pred HHHHHHhcccCCCEEEEECCCCC----HHHHHHHHh--CCCCCeEEEEECCH--------------HHHHHHHHHhhhcc
Confidence 44566665445568999999998 466777765 34667999998653 3466666666543
Q ss_pred -HHHcCCcEEEEEeeccCCcccCccccccccCCCeEEEeccccccccccccCcHHHHHHH-HHhcCCcEEEEEccc
Q 035867 156 -ARLMGVPFEFNVIHHVGDLCDLNLAELDVRSDEALAINCIGALHTIAAVDDRRDVLISN-LRSLQPRIITVVEEE 229 (362)
Q Consensus 156 -A~~~gvpfeF~~v~~~~~~e~l~~~~l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~-ir~L~P~vvvlvE~e 229 (362)
++..|++ ..+.+. .+++++.. .++..=+|-|...+||+.. .....+++. .+-|+|.++++....
T Consensus 771 nAkr~gl~-nVefiq--GDa~dLp~-----~d~sFDlVV~~eVLeHL~d--p~l~~~L~eI~RvLKPG~LIISTPN 836 (950)
T 3htx_A 771 NKEACNVK-SATLYD--GSILEFDS-----RLHDVDIGTCLEVIEHMEE--DQACEFGEKVLSLFHPKLLIVSTPN 836 (950)
T ss_dssp TTTCSSCS-EEEEEE--SCTTSCCT-----TSCSCCEEEEESCGGGSCH--HHHHHHHHHHHHTTCCSEEEEEECB
T ss_pred chhhcCCC-ceEEEE--CchHhCCc-----ccCCeeEEEEeCchhhCCh--HHHHHHHHHHHHHcCCCEEEEEecC
Confidence 2233554 233332 46665533 2222223344556799852 223456654 678899966666543
No 10
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=92.64 E-value=0.76 Score=39.38 Aligned_cols=112 Identities=17% Similarity=0.148 Sum_probs=66.2
Q ss_pred HHHHHHhhhcCCCeeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccCCCCCCCCCCCchhHHHHHHHHHHHHHH
Q 035867 75 CNGAIMEAFEGESKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTSKPVGGSGAGGLAAVQKVMKEIGNRMEK 154 (362)
Q Consensus 75 aNqaIleA~~g~~~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~~~~~~~~~~~~~~~~~~l~etg~rL~~ 154 (362)
..+.|++.+..... +|+|+|.|.|. +...|+.+ |..++|||+.+. ..++.+.++
T Consensus 32 ~~~~~~~~~~~~~~-~vLdiG~G~G~----~~~~l~~~----~~~~v~~~D~s~--------------~~~~~a~~~--- 85 (219)
T 3dlc_A 32 IAENIINRFGITAG-TCIDIGSGPGA----LSIALAKQ----SDFSIRALDFSK--------------HMNEIALKN--- 85 (219)
T ss_dssp HHHHHHHHHCCCEE-EEEEETCTTSH----HHHHHHHH----SEEEEEEEESCH--------------HHHHHHHHH---
T ss_pred HHHHHHHhcCCCCC-EEEEECCCCCH----HHHHHHHc----CCCeEEEEECCH--------------HHHHHHHHH---
Confidence 34566676665555 99999999885 55566665 457899998642 234444333
Q ss_pred HHHHcCCc--EEEEEeeccCCcccCccccccccCCCeEEEeccccccccccccCcHHHHHHH-HHhcCCcEEEEE
Q 035867 155 FARLMGVP--FEFNVIHHVGDLCDLNLAELDVRSDEALAINCIGALHTIAAVDDRRDVLISN-LRSLQPRIITVV 226 (362)
Q Consensus 155 fA~~~gvp--feF~~v~~~~~~e~l~~~~l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~-ir~L~P~vvvlv 226 (362)
++..|+. .+|.. .+++++. ..++..=+|-|...+||+. + ...+|+. .+.|+|.-.+++
T Consensus 86 -~~~~~~~~~~~~~~----~d~~~~~-----~~~~~~D~v~~~~~l~~~~---~-~~~~l~~~~~~L~pgG~l~~ 146 (219)
T 3dlc_A 86 -IADANLNDRIQIVQ----GDVHNIP-----IEDNYADLIVSRGSVFFWE---D-VATAFREIYRILKSGGKTYI 146 (219)
T ss_dssp -HHHTTCTTTEEEEE----CBTTBCS-----SCTTCEEEEEEESCGGGCS---C-HHHHHHHHHHHEEEEEEEEE
T ss_pred -HHhccccCceEEEE----cCHHHCC-----CCcccccEEEECchHhhcc---C-HHHHHHHHHHhCCCCCEEEE
Confidence 3445653 55533 2444432 2233333444555678873 3 4455654 566899877765
No 11
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=92.25 E-value=3 Score=37.08 Aligned_cols=109 Identities=14% Similarity=0.176 Sum_probs=63.2
Q ss_pred HHHhhhcCCCeeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccCCCCCCCCCCCchhHHHHHHHHHHHHHHHHH
Q 035867 78 AIMEAFEGESKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTSKPVGGSGAGGLAAVQKVMKEIGNRMEKFAR 157 (362)
Q Consensus 78 aIleA~~g~~~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~~~~~~~~~~~~~~~~~~l~etg~rL~~fA~ 157 (362)
.|++.+.-...-+|+|+|.|.|. +...|+.+. + ++|||+.+. ..++...++ ++
T Consensus 28 ~l~~~l~~~~~~~vLDiGcG~G~----~~~~l~~~~--~---~v~gvD~s~--------------~~l~~a~~~----~~ 80 (260)
T 1vl5_A 28 KLMQIAALKGNEEVLDVATGGGH----VANAFAPFV--K---KVVAFDLTE--------------DILKVARAF----IE 80 (260)
T ss_dssp HHHHHHTCCSCCEEEEETCTTCH----HHHHHGGGS--S---EEEEEESCH--------------HHHHHHHHH----HH
T ss_pred HHHHHhCCCCCCEEEEEeCCCCH----HHHHHHHhC--C---EEEEEeCCH--------------HHHHHHHHH----HH
Confidence 44555554555689999999885 556677653 2 899998642 234433333 34
Q ss_pred HcCCc-EEEEEeeccCCcccCccccccccCCCeEEEeccccccccccccCcHHHHHH-HHHhcCCcEEEEE
Q 035867 158 LMGVP-FEFNVIHHVGDLCDLNLAELDVRSDEALAINCIGALHTIAAVDDRRDVLIS-NLRSLQPRIITVV 226 (362)
Q Consensus 158 ~~gvp-feF~~v~~~~~~e~l~~~~l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~-~ir~L~P~vvvlv 226 (362)
..|++ .+|.. .+++++. ..++..=+|-|...+||+. ++ +.+|+ ..+-|+|.-.+++
T Consensus 81 ~~~~~~v~~~~----~d~~~l~-----~~~~~fD~V~~~~~l~~~~---d~-~~~l~~~~r~LkpgG~l~~ 138 (260)
T 1vl5_A 81 GNGHQQVEYVQ----GDAEQMP-----FTDERFHIVTCRIAAHHFP---NP-ASFVSEAYRVLKKGGQLLL 138 (260)
T ss_dssp HTTCCSEEEEE----CCC-CCC-----SCTTCEEEEEEESCGGGCS---CH-HHHHHHHHHHEEEEEEEEE
T ss_pred hcCCCceEEEE----ecHHhCC-----CCCCCEEEEEEhhhhHhcC---CH-HHHHHHHHHHcCCCCEEEE
Confidence 45654 55532 3555442 2233333444566789884 33 34554 5577899876664
No 12
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=91.29 E-value=4.4 Score=36.21 Aligned_cols=126 Identities=19% Similarity=0.078 Sum_probs=71.3
Q ss_pred HHhcCCchhhhHHHHHHHHHhhhc-CCCeeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccCCCCCCCCCCCch
Q 035867 61 FQEVSPWTTFGHVACNGAIMEAFE-GESKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTSKPVGGSGAGGLA 139 (362)
Q Consensus 61 f~~~~P~~~fa~~taNqaIleA~~-g~~~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~~~~~~~~~~~~~ 139 (362)
+++..+...-.+......+++.+. -...-+|+|+|.|.| .+...|+.+ |..++|||+.+.
T Consensus 19 ~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~vLDiGcG~G----~~~~~la~~----~~~~v~gvD~s~----------- 79 (267)
T 3kkz_A 19 FFSNMERQGPGSPEVTLKALSFIDNLTEKSLIADIGCGTG----GQTMVLAGH----VTGQVTGLDFLS----------- 79 (267)
T ss_dssp HHHTSSCSSSCCHHHHHHHHTTCCCCCTTCEEEEETCTTC----HHHHHHHTT----CSSEEEEEESCH-----------
T ss_pred HHhhccccCCCCHHHHHHHHHhcccCCCCCEEEEeCCCCC----HHHHHHHhc----cCCEEEEEeCCH-----------
Confidence 333333333333334445566665 234568999999987 466677776 346899998643
Q ss_pred hHHHHHHHHHHHHHHHHHHcCCc--EEEEEeeccCCcccCccccccccCCCeEEEeccccccccccccCcHHHHHHHH-H
Q 035867 140 AVQKVMKEIGNRMEKFARLMGVP--FEFNVIHHVGDLCDLNLAELDVRSDEALAINCIGALHTIAAVDDRRDVLISNL-R 216 (362)
Q Consensus 140 ~~~~~l~etg~rL~~fA~~~gvp--feF~~v~~~~~~e~l~~~~l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r 216 (362)
..++.+.+ .++..|++ .+|.. .+++++. ..++..=+|-|...+||+ + .+.+|+.+ +
T Consensus 80 ---~~~~~a~~----~~~~~~~~~~v~~~~----~d~~~~~-----~~~~~fD~i~~~~~~~~~----~-~~~~l~~~~~ 138 (267)
T 3kkz_A 80 ---GFIDIFNR----NARQSGLQNRVTGIV----GSMDDLP-----FRNEELDLIWSEGAIYNI----G-FERGLNEWRK 138 (267)
T ss_dssp ---HHHHHHHH----HHHHTTCTTTEEEEE----CCTTSCC-----CCTTCEEEEEESSCGGGT----C-HHHHHHHHGG
T ss_pred ---HHHHHHHH----HHHHcCCCcCcEEEE----cChhhCC-----CCCCCEEEEEEcCCceec----C-HHHHHHHHHH
Confidence 23443333 34556765 66633 3555543 223333344455567887 2 34556554 6
Q ss_pred hcCCcEEEEE
Q 035867 217 SLQPRIITVV 226 (362)
Q Consensus 217 ~L~P~vvvlv 226 (362)
.|+|.-.+++
T Consensus 139 ~LkpgG~l~~ 148 (267)
T 3kkz_A 139 YLKKGGYLAV 148 (267)
T ss_dssp GEEEEEEEEE
T ss_pred HcCCCCEEEE
Confidence 6799877664
No 13
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=90.65 E-value=6.5 Score=35.66 Aligned_cols=103 Identities=19% Similarity=0.245 Sum_probs=58.3
Q ss_pred CCeeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCcEEE
Q 035867 86 ESKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTSKPVGGSGAGGLAAVQKVMKEIGNRMEKFARLMGVPFEF 165 (362)
Q Consensus 86 ~~~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~~~~~~~~~~~~~~~~~~l~etg~rL~~fA~~~gvpfeF 165 (362)
.+.-.|+|+|.|.|. +...|+.+- |+..++|||+.+. ..++.+.+ .++..+...+|
T Consensus 21 ~~~~~vLDiGcG~G~----~~~~l~~~~--~~~~~v~gvD~s~--------------~~~~~a~~----~~~~~~~~v~~ 76 (284)
T 3gu3_A 21 TKPVHIVDYGCGYGY----LGLVLMPLL--PEGSKYTGIDSGE--------------TLLAEARE----LFRLLPYDSEF 76 (284)
T ss_dssp CSCCEEEEETCTTTH----HHHHHTTTS--CTTCEEEEEESCH--------------HHHHHHHH----HHHSSSSEEEE
T ss_pred CCCCeEEEecCCCCH----HHHHHHHhC--CCCCEEEEEECCH--------------HHHHHHHH----HHHhcCCceEE
Confidence 456789999999883 555666653 2347899998642 22333332 23345555555
Q ss_pred EEeeccCCcccCccccccccCCCeEEEeccccccccccccCcHHHHHH-HHHhcCCcEEEEE
Q 035867 166 NVIHHVGDLCDLNLAELDVRSDEALAINCIGALHTIAAVDDRRDVLIS-NLRSLQPRIITVV 226 (362)
Q Consensus 166 ~~v~~~~~~e~l~~~~l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~-~ir~L~P~vvvlv 226 (362)
.. .+++++.. ++..=+|-|...+||+. ++ +.+|+ ..+.|+|.-.+++
T Consensus 77 ~~----~d~~~~~~------~~~fD~v~~~~~l~~~~---~~-~~~l~~~~~~LkpgG~l~~ 124 (284)
T 3gu3_A 77 LE----GDATEIEL------NDKYDIAICHAFLLHMT---TP-ETMLQKMIHSVKKGGKIIC 124 (284)
T ss_dssp EE----SCTTTCCC------SSCEEEEEEESCGGGCS---SH-HHHHHHHHHTEEEEEEEEE
T ss_pred EE----cchhhcCc------CCCeeEEEECChhhcCC---CH-HHHHHHHHHHcCCCCEEEE
Confidence 32 35554432 22222344445578874 33 44555 4577899877763
No 14
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=90.47 E-value=5 Score=37.24 Aligned_cols=115 Identities=12% Similarity=0.112 Sum_probs=60.9
Q ss_pred HHHHhhhcCCCeeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccCCCCCCCCCCCchhHHHHHHHHHHHHHHHH
Q 035867 77 GAIMEAFEGESKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTSKPVGGSGAGGLAAVQKVMKEIGNRMEKFA 156 (362)
Q Consensus 77 qaIleA~~g~~~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~~~~~~~~~~~~~~~~~~l~etg~rL~~fA 156 (362)
+.|++.+.-.. .+|+|+|.|.|. +...|+.+. |.+++|+++. ... ++...+++.+.
T Consensus 158 ~~~~~~~~~~~-~~vlDvG~G~G~----~~~~l~~~~---p~~~~~~~D~-~~~--------------~~~a~~~~~~~- 213 (334)
T 2ip2_A 158 HEIPRLLDFRG-RSFVDVGGGSGE----LTKAILQAE---PSARGVMLDR-EGS--------------LGVARDNLSSL- 213 (334)
T ss_dssp HHHHHHSCCTT-CEEEEETCTTCH----HHHHHHHHC---TTCEEEEEEC-TTC--------------THHHHHHTHHH-
T ss_pred HHHHHhCCCCC-CEEEEeCCCchH----HHHHHHHHC---CCCEEEEeCc-HHH--------------HHHHHHHHhhc-
Confidence 55666664344 899999999994 455555542 4579999997 321 22333333221
Q ss_pred HHcCCcEEEEEeeccCCcccCccccccccCCCeEEEeccccccccccccCcHHHHHHHH-HhcCCcEEEE-Eccc
Q 035867 157 RLMGVPFEFNVIHHVGDLCDLNLAELDVRSDEALAINCIGALHTIAAVDDRRDVLISNL-RSLQPRIITV-VEEE 229 (362)
Q Consensus 157 ~~~gvpfeF~~v~~~~~~e~l~~~~l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~vvvl-vE~e 229 (362)
.+.-..+|..- ++.+ . +. ..-+.++ +...||+..+ .....+|+.+ +.|+|.-.++ +|.-
T Consensus 214 -~~~~~v~~~~~----d~~~-~---~~-~~~D~v~--~~~vl~~~~~--~~~~~~l~~~~~~L~pgG~l~i~e~~ 274 (334)
T 2ip2_A 214 -LAGERVSLVGG----DMLQ-E---VP-SNGDIYL--LSRIIGDLDE--AASLRLLGNCREAMAGDGRVVVIERT 274 (334)
T ss_dssp -HHTTSEEEEES----CTTT-C---CC-SSCSEEE--EESCGGGCCH--HHHHHHHHHHHHHSCTTCEEEEEECC
T ss_pred -CCCCcEEEecC----CCCC-C---CC-CCCCEEE--EchhccCCCH--HHHHHHHHHHHHhcCCCCEEEEEEec
Confidence 11123555332 3332 1 11 1123444 4445687742 2234667665 5679976554 5543
No 15
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=90.17 E-value=2.3 Score=38.55 Aligned_cols=111 Identities=11% Similarity=0.064 Sum_probs=65.3
Q ss_pred HHHHhhhcCCCeeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccCCCCCCCCCCCchhHHHHHHHHHHHHHHHH
Q 035867 77 GAIMEAFEGESKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTSKPVGGSGAGGLAAVQKVMKEIGNRMEKFA 156 (362)
Q Consensus 77 qaIleA~~g~~~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~~~~~~~~~~~~~~~~~~l~etg~rL~~fA 156 (362)
+.+++.+...+.-+|+|+|.|.|. +...|+.+ | .++|||+.+. ..++.+.+ .+
T Consensus 110 ~~~~~~~~~~~~~~vLD~GcG~G~----~~~~l~~~--g---~~v~~vD~s~--------------~~~~~a~~----~~ 162 (286)
T 3m70_A 110 GDVVDAAKIISPCKVLDLGCGQGR----NSLYLSLL--G---YDVTSWDHNE--------------NSIAFLNE----TK 162 (286)
T ss_dssp HHHHHHHHHSCSCEEEEESCTTCH----HHHHHHHT--T---CEEEEEESCH--------------HHHHHHHH----HH
T ss_pred HHHHHHhhccCCCcEEEECCCCCH----HHHHHHHC--C---CeEEEEECCH--------------HHHHHHHH----HH
Confidence 456666665567789999999985 55566666 2 3799998653 23433333 34
Q ss_pred HHcCCcEEEEEeeccCCcccCccccccccCCCeEEEeccccccccccccCcHHHHHHHH-HhcCCcEEEEE
Q 035867 157 RLMGVPFEFNVIHHVGDLCDLNLAELDVRSDEALAINCIGALHTIAAVDDRRDVLISNL-RSLQPRIITVV 226 (362)
Q Consensus 157 ~~~gvpfeF~~v~~~~~~e~l~~~~l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~vvvlv 226 (362)
+..|+..+|.. .++.++.. ++..=+|-|...+||+. +..+..+|+.+ +.|+|.-++++
T Consensus 163 ~~~~~~~~~~~----~d~~~~~~------~~~fD~i~~~~~~~~~~--~~~~~~~l~~~~~~LkpgG~l~i 221 (286)
T 3m70_A 163 EKENLNISTAL----YDINAANI------QENYDFIVSTVVFMFLN--RERVPSIIKNMKEHTNVGGYNLI 221 (286)
T ss_dssp HHTTCCEEEEE----CCGGGCCC------CSCEEEEEECSSGGGSC--GGGHHHHHHHHHHTEEEEEEEEE
T ss_pred HHcCCceEEEE----eccccccc------cCCccEEEEccchhhCC--HHHHHHHHHHHHHhcCCCcEEEE
Confidence 45677666533 24544322 23222333444568884 23456677655 66799877544
No 16
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=90.10 E-value=4.8 Score=37.11 Aligned_cols=109 Identities=16% Similarity=0.021 Sum_probs=62.6
Q ss_pred HHHhhhc-CCCeeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccCCCCCCCCCCCchhHHHHHHHHHHHHHHHH
Q 035867 78 AIMEAFE-GESKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTSKPVGGSGAGGLAAVQKVMKEIGNRMEKFA 156 (362)
Q Consensus 78 aIleA~~-g~~~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~~~~~~~~~~~~~~~~~~l~etg~rL~~fA 156 (362)
.|++.+. -...-+|+|+|.|.|. +...|+.+.+ .++|||+.+. ..++.+. +.+
T Consensus 107 ~l~~~l~~~~~~~~vLDiGcG~G~----~~~~la~~~~----~~v~gvD~s~--------------~~~~~a~----~~~ 160 (312)
T 3vc1_A 107 FLMDHLGQAGPDDTLVDAGCGRGG----SMVMAHRRFG----SRVEGVTLSA--------------AQADFGN----RRA 160 (312)
T ss_dssp HHHTTSCCCCTTCEEEEESCTTSH----HHHHHHHHHC----CEEEEEESCH--------------HHHHHHH----HHH
T ss_pred HHHHHhccCCCCCEEEEecCCCCH----HHHHHHHHcC----CEEEEEeCCH--------------HHHHHHH----HHH
Confidence 4666665 3445689999999884 4455555432 4799998642 2343333 334
Q ss_pred HHcCCc--EEEEEeeccCCcccCccccccccCCCeEEEeccccccccccccCcHHHHHHH-HHhcCCcEEEEE
Q 035867 157 RLMGVP--FEFNVIHHVGDLCDLNLAELDVRSDEALAINCIGALHTIAAVDDRRDVLISN-LRSLQPRIITVV 226 (362)
Q Consensus 157 ~~~gvp--feF~~v~~~~~~e~l~~~~l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~-ir~L~P~vvvlv 226 (362)
+..|++ .+|.. .+++++. ..++..=+|-|...+||+ + .+.+|+. .+.|+|.-.+++
T Consensus 161 ~~~~~~~~v~~~~----~d~~~~~-----~~~~~fD~V~~~~~l~~~-~----~~~~l~~~~~~LkpgG~l~~ 219 (312)
T 3vc1_A 161 RELRIDDHVRSRV----CNMLDTP-----FDKGAVTASWNNESTMYV-D----LHDLFSEHSRFLKVGGRYVT 219 (312)
T ss_dssp HHTTCTTTEEEEE----CCTTSCC-----CCTTCEEEEEEESCGGGS-C----HHHHHHHHHHHEEEEEEEEE
T ss_pred HHcCCCCceEEEE----CChhcCC-----CCCCCEeEEEECCchhhC-C----HHHHHHHHHHHcCCCcEEEE
Confidence 556765 66633 3555442 223333334445567887 2 4555654 567899876654
No 17
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=89.56 E-value=2.4 Score=37.52 Aligned_cols=123 Identities=11% Similarity=0.157 Sum_probs=67.2
Q ss_pred CchhhhHHHHHHHHHhhhcCCCeeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccCCCCCCCCCCCchhHHHHH
Q 035867 66 PWTTFGHVACNGAIMEAFEGESKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTSKPVGGSGAGGLAAVQKVM 145 (362)
Q Consensus 66 P~~~fa~~taNqaIleA~~g~~~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~~~~~~~~~~~~~~~~~~l 145 (362)
.++.-+.......+++.+.-...-+|+|+|.|.|. +...|+.+.+ .++|||+.+. ..+
T Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~----~~~~l~~~~~----~~v~~vD~s~--------------~~~ 91 (266)
T 3ujc_A 34 NYISSGGLEATKKILSDIELNENSKVLDIGSGLGG----GCMYINEKYG----AHTHGIDICS--------------NIV 91 (266)
T ss_dssp TCCSTTHHHHHHHHTTTCCCCTTCEEEEETCTTSH----HHHHHHHHHC----CEEEEEESCH--------------HHH
T ss_pred CccccchHHHHHHHHHhcCCCCCCEEEEECCCCCH----HHHHHHHHcC----CEEEEEeCCH--------------HHH
Confidence 34444444556777777766667799999999884 4444554422 4899998642 223
Q ss_pred HHHHHHHHHHHHHcCCcEEEEEeeccCCcccCccccccccCCCeEEEeccccccccccccCcHHHHHHH-HHhcCCcEEE
Q 035867 146 KEIGNRMEKFARLMGVPFEFNVIHHVGDLCDLNLAELDVRSDEALAINCIGALHTIAAVDDRRDVLISN-LRSLQPRIIT 224 (362)
Q Consensus 146 ~etg~rL~~fA~~~gvpfeF~~v~~~~~~e~l~~~~l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~-ir~L~P~vvv 224 (362)
+.+.+++.. . -..+|.. .++.++. ..++..=+|-|...+||+.. .....+|+. .+-|+|.-.+
T Consensus 92 ~~a~~~~~~----~-~~~~~~~----~d~~~~~-----~~~~~fD~v~~~~~l~~~~~--~~~~~~l~~~~~~L~pgG~l 155 (266)
T 3ujc_A 92 NMANERVSG----N-NKIIFEA----NDILTKE-----FPENNFDLIYSRDAILALSL--ENKNKLFQKCYKWLKPTGTL 155 (266)
T ss_dssp HHHHHTCCS----C-TTEEEEE----CCTTTCC-----CCTTCEEEEEEESCGGGSCH--HHHHHHHHHHHHHEEEEEEE
T ss_pred HHHHHHhhc----C-CCeEEEE----CccccCC-----CCCCcEEEEeHHHHHHhcCh--HHHHHHHHHHHHHcCCCCEE
Confidence 322222111 0 2344432 2444432 22333334445566788842 234556655 4667997666
Q ss_pred EE
Q 035867 225 VV 226 (362)
Q Consensus 225 lv 226 (362)
++
T Consensus 156 ~~ 157 (266)
T 3ujc_A 156 LI 157 (266)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 18
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=89.35 E-value=7.7 Score=36.24 Aligned_cols=115 Identities=14% Similarity=0.108 Sum_probs=65.2
Q ss_pred HHHhhhcCCC-eeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccCCCCCCCCCCCchhHHHHHHHHHHHHHHHH
Q 035867 78 AIMEAFEGES-KLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTSKPVGGSGAGGLAAVQKVMKEIGNRMEKFA 156 (362)
Q Consensus 78 aIleA~~g~~-~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~~~~~~~~~~~~~~~~~~l~etg~rL~~fA 156 (362)
.|++.+.-.+ ..+|+|+|.|.|. +...|+.+- |.+++|+++.+. .++...++ +
T Consensus 169 ~~l~~~~~~~~~~~vlDvG~G~G~----~~~~l~~~~---p~~~~~~~D~~~---------------~~~~a~~~----~ 222 (352)
T 3mcz_A 169 DVVSELGVFARARTVIDLAGGHGT----YLAQVLRRH---PQLTGQIWDLPT---------------TRDAARKT----I 222 (352)
T ss_dssp HHHHTCGGGTTCCEEEEETCTTCH----HHHHHHHHC---TTCEEEEEECGG---------------GHHHHHHH----H
T ss_pred HHHHhCCCcCCCCEEEEeCCCcCH----HHHHHHHhC---CCCeEEEEECHH---------------HHHHHHHH----H
Confidence 6777776555 7899999999985 555555542 458999998631 23333332 3
Q ss_pred HHcCCc--EEEEEeeccCCcccCccccccccCCCeEEEeccccccccccccCcHHHHHHHH-HhcCCcEEEE-Ecc
Q 035867 157 RLMGVP--FEFNVIHHVGDLCDLNLAELDVRSDEALAINCIGALHTIAAVDDRRDVLISNL-RSLQPRIITV-VEE 228 (362)
Q Consensus 157 ~~~gvp--feF~~v~~~~~~e~l~~~~l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~vvvl-vE~ 228 (362)
+..++. .+|..- ++.+... ..++..=+|-|...||++.+ .....+|+.+ +.|+|.-.++ +|.
T Consensus 223 ~~~~~~~~v~~~~~----d~~~~~~----~~~~~~D~v~~~~vlh~~~~--~~~~~~l~~~~~~L~pgG~l~i~e~ 288 (352)
T 3mcz_A 223 HAHDLGGRVEFFEK----NLLDARN----FEGGAADVVMLNDCLHYFDA--REAREVIGHAAGLVKPGGALLILTM 288 (352)
T ss_dssp HHTTCGGGEEEEEC----CTTCGGG----GTTCCEEEEEEESCGGGSCH--HHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred HhcCCCCceEEEeC----CcccCcc----cCCCCccEEEEecccccCCH--HHHHHHHHHHHHHcCCCCEEEEEEe
Confidence 344553 566432 3333210 01222334445556788842 2345667665 6679976654 453
No 19
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=88.96 E-value=2.1 Score=39.15 Aligned_cols=113 Identities=13% Similarity=0.098 Sum_probs=61.3
Q ss_pred CCeeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeE--EEEeccCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHcC---
Q 035867 86 ESKLHIVDISNTYCTQWPTLLEALATRTDDTPHLR--LTTVVTSKPVGGSGAGGLAAVQKVMKEIGNRMEKFARLMG--- 160 (362)
Q Consensus 86 ~~~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lr--IT~i~~~~~~~~~~~~~~~~~~~~l~etg~rL~~fA~~~g--- 160 (362)
....+|+|+|.|.|.--..+++.++.+. |..+ +|||+.+. ..++...+++ ++.-+
T Consensus 51 ~~~~~VLDiG~GtG~~~~~~l~~l~~~~---~~~~v~~~~vD~S~--------------~ml~~a~~~~---~~~~~~~~ 110 (292)
T 2aot_A 51 KSEIKILSIGGGAGEIDLQILSKVQAQY---PGVCINNEVVEPSA--------------EQIAKYKELV---AKTSNLEN 110 (292)
T ss_dssp CSEEEEEEETCTTSHHHHHHHHHHHHHS---TTCEEEEEEECSCH--------------HHHHHHHHHH---HTCSSCTT
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHHHhhC---CCceeeEEEEeCCH--------------HHHHHHHHHH---HhccCCCc
Confidence 4577999999999953334677776552 3344 49998642 3454444433 22223
Q ss_pred CcEEEEEeeccCCcccCcccc-ccccCCCeEEEeccccccccccccCcHHHHHHHH-HhcCCcEEEEE
Q 035867 161 VPFEFNVIHHVGDLCDLNLAE-LDVRSDEALAINCIGALHTIAAVDDRRDVLISNL-RSLQPRIITVV 226 (362)
Q Consensus 161 vpfeF~~v~~~~~~e~l~~~~-l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~vvvlv 226 (362)
+.|+|.. .+.+++.... ....++..=+|-|...|||+. + .+.+|+.+ |-|+|.-.+++
T Consensus 111 v~~~~~~----~~~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~---d-~~~~l~~~~r~LkpgG~l~i 170 (292)
T 2aot_A 111 VKFAWHK----ETSSEYQSRMLEKKELQKWDFIHMIQMLYYVK---D-IPATLKFFHSLLGTNAKMLI 170 (292)
T ss_dssp EEEEEEC----SCHHHHHHHHHTTTCCCCEEEEEEESCGGGCS---C-HHHHHHHHHHTEEEEEEEEE
T ss_pred ceEEEEe----cchhhhhhhhccccCCCceeEEEEeeeeeecC---C-HHHHHHHHHHHcCCCcEEEE
Confidence 3444422 2333321100 001233344566777789985 3 44556655 55699976653
No 20
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=88.95 E-value=6 Score=37.89 Aligned_cols=112 Identities=13% Similarity=0.027 Sum_probs=61.2
Q ss_pred CeeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHc-C----C
Q 035867 87 SKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTSKPVGGSGAGGLAAVQKVMKEIGNRMEKFARLM-G----V 161 (362)
Q Consensus 87 ~~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~~~~~~~~~~~~~~~~~~l~etg~rL~~fA~~~-g----v 161 (362)
+.-+|+|+|.|.|. +...|+.+- .|..++|||+.+. ..++.+.+++.+.+... | -
T Consensus 83 ~~~~VLDlGcG~G~----~~~~la~~~--~~~~~v~gvD~s~--------------~~l~~a~~~~~~~~~~~~g~~~~~ 142 (383)
T 4fsd_A 83 EGATVLDLGCGTGR----DVYLASKLV--GEHGKVIGVDMLD--------------NQLEVARKYVEYHAEKFFGSPSRS 142 (383)
T ss_dssp TTCEEEEESCTTSH----HHHHHHHHH--TTTCEEEEEECCH--------------HHHHHHHHTHHHHHHHHHSSTTCC
T ss_pred CCCEEEEecCccCH----HHHHHHHHh--CCCCEEEEEECCH--------------HHHHHHHHHHHHhhhhcccccCCC
Confidence 34589999999985 333343331 1335899998643 34556666666555443 4 3
Q ss_pred cEEEEEeeccCCcccCccc-cccccCCCeEEEeccccccccccccCcHHHHHHH-HHhcCCcEEEEE
Q 035867 162 PFEFNVIHHVGDLCDLNLA-ELDVRSDEALAINCIGALHTIAAVDDRRDVLISN-LRSLQPRIITVV 226 (362)
Q Consensus 162 pfeF~~v~~~~~~e~l~~~-~l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~-ir~L~P~vvvlv 226 (362)
..+|.. .+++++... .....++..=+|-+...+|++. + ...+|+. .+-|+|.-.+++
T Consensus 143 ~v~~~~----~d~~~l~~~~~~~~~~~~fD~V~~~~~l~~~~---d-~~~~l~~~~r~LkpgG~l~i 201 (383)
T 4fsd_A 143 NVRFLK----GFIENLATAEPEGVPDSSVDIVISNCVCNLST---N-KLALFKEIHRVLRDGGELYF 201 (383)
T ss_dssp CEEEEE----SCTTCGGGCBSCCCCTTCEEEEEEESCGGGCS---C-HHHHHHHHHHHEEEEEEEEE
T ss_pred ceEEEE----ccHHHhhhcccCCCCCCCEEEEEEccchhcCC---C-HHHHHHHHHHHcCCCCEEEE
Confidence 455533 345544211 1123333233333444567774 3 4455654 467899876664
No 21
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=88.76 E-value=7.1 Score=34.33 Aligned_cols=126 Identities=13% Similarity=0.062 Sum_probs=69.3
Q ss_pred HHhcCCchhhhHHHHHHHHHhhhcC-CCeeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccCCCCCCCCCCCch
Q 035867 61 FQEVSPWTTFGHVACNGAIMEAFEG-ESKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTSKPVGGSGAGGLA 139 (362)
Q Consensus 61 f~~~~P~~~fa~~taNqaIleA~~g-~~~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~~~~~~~~~~~~~ 139 (362)
+++..+-..-.+......+++.+.+ ...-+|+|+|.|.|. +...|+.+.+ . ++|||+.+.
T Consensus 19 ~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~vLDiG~G~G~----~~~~l~~~~~---~-~v~~vD~s~----------- 79 (257)
T 3f4k_A 19 YFKLLKRQGPGSPEATRKAVSFINELTDDAKIADIGCGTGG----QTLFLADYVK---G-QITGIDLFP----------- 79 (257)
T ss_dssp HHTTSSCSSSCCHHHHHHHHTTSCCCCTTCEEEEETCTTSH----HHHHHHHHCC---S-EEEEEESCH-----------
T ss_pred HHcCccccCCCCHHHHHHHHHHHhcCCCCCeEEEeCCCCCH----HHHHHHHhCC---C-eEEEEECCH-----------
Confidence 3333333333334444556666643 334589999999885 4445555432 2 899998653
Q ss_pred hHHHHHHHHHHHHHHHHHHcCCc--EEEEEeeccCCcccCccccccccCCCeEEEeccccccccccccCcHHHHHHHH-H
Q 035867 140 AVQKVMKEIGNRMEKFARLMGVP--FEFNVIHHVGDLCDLNLAELDVRSDEALAINCIGALHTIAAVDDRRDVLISNL-R 216 (362)
Q Consensus 140 ~~~~~l~etg~rL~~fA~~~gvp--feF~~v~~~~~~e~l~~~~l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r 216 (362)
..++.+. +.++..|++ .+|.. .+++++. ..++..=+|-|...+||+ + .+.+|+.+ +
T Consensus 80 ---~~~~~a~----~~~~~~~~~~~~~~~~----~d~~~~~-----~~~~~fD~v~~~~~l~~~----~-~~~~l~~~~~ 138 (257)
T 3f4k_A 80 ---DFIEIFN----ENAVKANCADRVKGIT----GSMDNLP-----FQNEELDLIWSEGAIYNI----G-FERGMNEWSK 138 (257)
T ss_dssp ---HHHHHHH----HHHHHTTCTTTEEEEE----CCTTSCS-----SCTTCEEEEEEESCSCCC----C-HHHHHHHHHT
T ss_pred ---HHHHHHH----HHHHHcCCCCceEEEE----CChhhCC-----CCCCCEEEEEecChHhhc----C-HHHHHHHHHH
Confidence 2343333 334556766 56633 3455442 223333344455567887 2 44566655 5
Q ss_pred hcCCcEEEEE
Q 035867 217 SLQPRIITVV 226 (362)
Q Consensus 217 ~L~P~vvvlv 226 (362)
-|+|.-.+++
T Consensus 139 ~L~pgG~l~~ 148 (257)
T 3f4k_A 139 YLKKGGFIAV 148 (257)
T ss_dssp TEEEEEEEEE
T ss_pred HcCCCcEEEE
Confidence 5799877764
No 22
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=88.25 E-value=2.8 Score=36.21 Aligned_cols=114 Identities=17% Similarity=0.212 Sum_probs=63.7
Q ss_pred HHHhhhcCCCeeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccCCCCCCCCCCCchhHHHHHHHHHHHHHHHHH
Q 035867 78 AIMEAFEGESKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTSKPVGGSGAGGLAAVQKVMKEIGNRMEKFAR 157 (362)
Q Consensus 78 aIleA~~g~~~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~~~~~~~~~~~~~~~~~~l~etg~rL~~fA~ 157 (362)
.|++.+...+.-.|+|+|.|.|. +...|+.+. |..++|||+.+. ..++.+.++ ++
T Consensus 20 ~l~~~l~~~~~~~vLDiGcG~G~----~~~~l~~~~---~~~~v~gvD~s~--------------~~~~~a~~~----~~ 74 (217)
T 3jwh_A 20 GVVAALKQSNARRVIDLGCGQGN----LLKILLKDS---FFEQITGVDVSY--------------RSLEIAQER----LD 74 (217)
T ss_dssp HHHHHHHHTTCCEEEEETCTTCH----HHHHHHHCT---TCSEEEEEESCH--------------HHHHHHHHH----HT
T ss_pred HHHHHHHhcCCCEEEEeCCCCCH----HHHHHHhhC---CCCEEEEEECCH--------------HHHHHHHHH----HH
Confidence 44455544445589999999885 566676653 346899998653 234444333 23
Q ss_pred HcCC------cEEEEEeeccCCcccCccccccccCCCeEEEeccccccccccccCcHHHHHHHH-HhcCCcEEEEEc
Q 035867 158 LMGV------PFEFNVIHHVGDLCDLNLAELDVRSDEALAINCIGALHTIAAVDDRRDVLISNL-RSLQPRIITVVE 227 (362)
Q Consensus 158 ~~gv------pfeF~~v~~~~~~e~l~~~~l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~vvvlvE 227 (362)
..|+ ..+|.. .++...... ...=+.|+ |...+||+. +.....+|+.+ +.|+|.-++++.
T Consensus 75 ~~~~~~~~~~~v~~~~----~d~~~~~~~---~~~fD~v~--~~~~l~~~~--~~~~~~~l~~~~~~LkpgG~li~~ 140 (217)
T 3jwh_A 75 RLRLPRNQWERLQLIQ----GALTYQDKR---FHGYDAAT--VIEVIEHLD--LSRLGAFERVLFEFAQPKIVIVTT 140 (217)
T ss_dssp TCCCCHHHHTTEEEEE----CCTTSCCGG---GCSCSEEE--EESCGGGCC--HHHHHHHHHHHHTTTCCSEEEEEE
T ss_pred HhcCCcccCcceEEEe----CCccccccc---CCCcCEEe--eHHHHHcCC--HHHHHHHHHHHHHHcCCCEEEEEc
Confidence 3444 355532 244333211 11223444 455578884 22346677665 557999877753
No 23
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=88.04 E-value=4.1 Score=35.14 Aligned_cols=120 Identities=14% Similarity=0.222 Sum_probs=66.3
Q ss_pred HHHHhhhcCCCeeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccCCCCCCCCCCCchhHHHHHHHHHHHHHHHH
Q 035867 77 GAIMEAFEGESKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTSKPVGGSGAGGLAAVQKVMKEIGNRMEKFA 156 (362)
Q Consensus 77 qaIleA~~g~~~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~~~~~~~~~~~~~~~~~~l~etg~rL~~fA 156 (362)
+.|++.+...+.-.|+|+|.|.|. +...|+.+. |..++|||+.+. ..++.+.+++
T Consensus 19 ~~l~~~l~~~~~~~vLDiGcG~G~----~~~~l~~~~---~~~~v~gvD~s~--------------~~~~~a~~~~---- 73 (219)
T 3jwg_A 19 GTVVAVLKSVNAKKVIDLGCGEGN----LLSLLLKDK---SFEQITGVDVSY--------------SVLERAKDRL---- 73 (219)
T ss_dssp HHHHHHHHHTTCCEEEEETCTTCH----HHHHHHTST---TCCEEEEEESCH--------------HHHHHHHHHH----
T ss_pred HHHHHHHhhcCCCEEEEecCCCCH----HHHHHHhcC---CCCEEEEEECCH--------------HHHHHHHHHH----
Confidence 445555554455689999999885 666676653 447899998653 2344444332
Q ss_pred HHcCC------cEEEEEeeccCCcccCccccccccCCCeEEEeccccccccccccCcHHHHHHHH-HhcCCcEEEEEccc
Q 035867 157 RLMGV------PFEFNVIHHVGDLCDLNLAELDVRSDEALAINCIGALHTIAAVDDRRDVLISNL-RSLQPRIITVVEEE 229 (362)
Q Consensus 157 ~~~gv------pfeF~~v~~~~~~e~l~~~~l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~vvvlvE~e 229 (362)
+..++ ..+|.. .+++.+... -..=+.|+ |...+||+.. ..+..+|+.+ +.|+|.-++++...
T Consensus 74 ~~~~~~~~~~~~v~~~~----~d~~~~~~~---~~~fD~V~--~~~~l~~~~~--~~~~~~l~~~~~~LkpgG~~i~~~~ 142 (219)
T 3jwg_A 74 KIDRLPEMQRKRISLFQ----SSLVYRDKR---FSGYDAAT--VIEVIEHLDE--NRLQAFEKVLFEFTRPQTVIVSTPN 142 (219)
T ss_dssp TGGGSCHHHHTTEEEEE----CCSSSCCGG---GTTCSEEE--EESCGGGCCH--HHHHHHHHHHHTTTCCSEEEEEEEB
T ss_pred HhhccccccCcceEEEe----Ccccccccc---cCCCCEEE--EHHHHHhCCH--HHHHHHHHHHHHhhCCCEEEEEccc
Confidence 22233 345532 244333211 11113333 5556788842 2345667655 66799987776544
Q ss_pred ccc
Q 035867 230 VDL 232 (362)
Q Consensus 230 a~~ 232 (362)
..+
T Consensus 143 ~~~ 145 (219)
T 3jwg_A 143 KEY 145 (219)
T ss_dssp GGG
T ss_pred hhh
Confidence 333
No 24
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=87.69 E-value=7.6 Score=34.17 Aligned_cols=111 Identities=12% Similarity=0.095 Sum_probs=64.5
Q ss_pred HHHHHHhhhcCCCeeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccCCCCCCCCCCCchhHHHHHHHHHHHHHH
Q 035867 75 CNGAIMEAFEGESKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTSKPVGGSGAGGLAAVQKVMKEIGNRMEK 154 (362)
Q Consensus 75 aNqaIleA~~g~~~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~~~~~~~~~~~~~~~~~~l~etg~rL~~ 154 (362)
.-+.|++.+...+.-.|+|+|.|.|. +...|+.+. + . ++|||+.+. ..++.+.+++.
T Consensus 32 ~~~~l~~~~~~~~~~~vLD~GcG~G~----~~~~l~~~~--~-~-~v~~vD~s~--------------~~~~~a~~~~~- 88 (253)
T 3g5l_A 32 EWHELKKMLPDFNQKTVLDLGCGFGW----HCIYAAEHG--A-K-KVLGIDLSE--------------RMLTEAKRKTT- 88 (253)
T ss_dssp HHHHHHTTCCCCTTCEEEEETCTTCH----HHHHHHHTT--C-S-EEEEEESCH--------------HHHHHHHHHCC-
T ss_pred hHHHHHHhhhccCCCEEEEECCCCCH----HHHHHHHcC--C-C-EEEEEECCH--------------HHHHHHHHhhc-
Confidence 34566777766677899999999984 566666652 2 2 899998642 23433322221
Q ss_pred HHHHcCCcEEEEEeeccCCcccCccccccccCCCeEEEeccccccccccccCcHHHHHHHH-HhcCCcEEEEE
Q 035867 155 FARLMGVPFEFNVIHHVGDLCDLNLAELDVRSDEALAINCIGALHTIAAVDDRRDVLISNL-RSLQPRIITVV 226 (362)
Q Consensus 155 fA~~~gvpfeF~~v~~~~~~e~l~~~~l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~vvvlv 226 (362)
+-..+|.. .+++++. ..++..=+|-|...+||+. + ...+|+.+ +.|+|.-.+++
T Consensus 89 -----~~~~~~~~----~d~~~~~-----~~~~~fD~v~~~~~l~~~~---~-~~~~l~~~~~~LkpgG~l~~ 143 (253)
T 3g5l_A 89 -----SPVVCYEQ----KAIEDIA-----IEPDAYNVVLSSLALHYIA---S-FDDICKKVYINLKSSGSFIF 143 (253)
T ss_dssp -----CTTEEEEE----CCGGGCC-----CCTTCEEEEEEESCGGGCS---C-HHHHHHHHHHHEEEEEEEEE
T ss_pred -----cCCeEEEE----cchhhCC-----CCCCCeEEEEEchhhhhhh---h-HHHHHHHHHHHcCCCcEEEE
Confidence 23445533 2444432 2233333444555678883 3 45566655 55899877775
No 25
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=87.42 E-value=5.8 Score=33.97 Aligned_cols=110 Identities=14% Similarity=0.113 Sum_probs=62.5
Q ss_pred HHHhhhcCCCeeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccCCCCCCCCCCCchhHHHHHHHHHHHHHHHHH
Q 035867 78 AIMEAFEGESKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTSKPVGGSGAGGLAAVQKVMKEIGNRMEKFAR 157 (362)
Q Consensus 78 aIleA~~g~~~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~~~~~~~~~~~~~~~~~~l~etg~rL~~fA~ 157 (362)
.|.+.+...+.-+|+|+|.|.|. +...|+.+ + -++|||+.+. ..++.+.+++.
T Consensus 42 ~l~~~~~~~~~~~vLDiGcG~G~----~~~~l~~~--~---~~v~~vD~s~--------------~~~~~a~~~~~---- 94 (216)
T 3ofk_A 42 LLRLSLSSGAVSNGLEIGCAAGA----FTEKLAPH--C---KRLTVIDVMP--------------RAIGRACQRTK---- 94 (216)
T ss_dssp HHHHHTTTSSEEEEEEECCTTSH----HHHHHGGG--E---EEEEEEESCH--------------HHHHHHHHHTT----
T ss_pred HHHHHcccCCCCcEEEEcCCCCH----HHHHHHHc--C---CEEEEEECCH--------------HHHHHHHHhcc----
Confidence 44445556677899999999984 56666665 2 4899998642 23444333322
Q ss_pred HcCCcEEEEEeeccCCcccCccccccccCCCeEEEeccccccccccccCcHHHHHH-HHHhcCCcEEEEE
Q 035867 158 LMGVPFEFNVIHHVGDLCDLNLAELDVRSDEALAINCIGALHTIAAVDDRRDVLIS-NLRSLQPRIITVV 226 (362)
Q Consensus 158 ~~gvpfeF~~v~~~~~~e~l~~~~l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~-~ir~L~P~vvvlv 226 (362)
..+ ..+|.. .+++++.+ ++..=+|-|...+||+.+. .....+|+ ..+.|+|.-++++
T Consensus 95 ~~~-~~~~~~----~d~~~~~~------~~~fD~v~~~~~l~~~~~~-~~~~~~l~~~~~~L~pgG~l~~ 152 (216)
T 3ofk_A 95 RWS-HISWAA----TDILQFST------AELFDLIVVAEVLYYLEDM-TQMRTAIDNMVKMLAPGGHLVF 152 (216)
T ss_dssp TCS-SEEEEE----CCTTTCCC------SCCEEEEEEESCGGGSSSH-HHHHHHHHHHHHTEEEEEEEEE
T ss_pred cCC-CeEEEE----cchhhCCC------CCCccEEEEccHHHhCCCH-HHHHHHHHHHHHHcCCCCEEEE
Confidence 222 445533 34554431 2323344455667888531 22344555 4567899877765
No 26
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=87.10 E-value=15 Score=32.20 Aligned_cols=111 Identities=19% Similarity=0.184 Sum_probs=63.7
Q ss_pred HHHHHhhhcCCCeeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccCCCCCCCCCCCchhHHHHHHHHHHHHHHH
Q 035867 76 NGAIMEAFEGESKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTSKPVGGSGAGGLAAVQKVMKEIGNRMEKF 155 (362)
Q Consensus 76 NqaIleA~~g~~~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~~~~~~~~~~~~~~~~~~l~etg~rL~~f 155 (362)
+.-+++.+.-...-+|+|+|.|.|. +...|+.+. + ++|||+.+. ..++.+.++
T Consensus 10 ~~~~~~~~~~~~~~~vLDiGcG~G~----~~~~l~~~~--~---~v~~vD~s~--------------~~~~~a~~~---- 62 (239)
T 1xxl_A 10 LGLMIKTAECRAEHRVLDIGAGAGH----TALAFSPYV--Q---ECIGVDATK--------------EMVEVASSF---- 62 (239)
T ss_dssp HHHHHHHHTCCTTCEEEEESCTTSH----HHHHHGGGS--S---EEEEEESCH--------------HHHHHHHHH----
T ss_pred cchHHHHhCcCCCCEEEEEccCcCH----HHHHHHHhC--C---EEEEEECCH--------------HHHHHHHHH----
Confidence 3445566665666789999999885 455666552 2 799998642 234333333
Q ss_pred HHHcCCc-EEEEEeeccCCcccCccccccccCCCeEEEeccccccccccccCcHHHHHH-HHHhcCCcEEEEE
Q 035867 156 ARLMGVP-FEFNVIHHVGDLCDLNLAELDVRSDEALAINCIGALHTIAAVDDRRDVLIS-NLRSLQPRIITVV 226 (362)
Q Consensus 156 A~~~gvp-feF~~v~~~~~~e~l~~~~l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~-~ir~L~P~vvvlv 226 (362)
++..|++ ++|.. .+++++. ..++..=+|-|...+||+. ++ ..+|+ ..+-|+|.-.+++
T Consensus 63 ~~~~~~~~v~~~~----~d~~~~~-----~~~~~fD~v~~~~~l~~~~---~~-~~~l~~~~~~LkpgG~l~~ 122 (239)
T 1xxl_A 63 AQEKGVENVRFQQ----GTAESLP-----FPDDSFDIITCRYAAHHFS---DV-RKAVREVARVLKQDGRFLL 122 (239)
T ss_dssp HHHHTCCSEEEEE----CBTTBCC-----SCTTCEEEEEEESCGGGCS---CH-HHHHHHHHHHEEEEEEEEE
T ss_pred HHHcCCCCeEEEe----cccccCC-----CCCCcEEEEEECCchhhcc---CH-HHHHHHHHHHcCCCcEEEE
Confidence 3344554 55532 3455442 2233333444556678884 33 44554 4567899876664
No 27
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=87.01 E-value=9.8 Score=36.12 Aligned_cols=113 Identities=18% Similarity=0.223 Sum_probs=63.6
Q ss_pred HHHHhhhcCCCeeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccCCCCCCCCCCCchhHHHHHHHHHHHHHHHH
Q 035867 77 GAIMEAFEGESKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTSKPVGGSGAGGLAAVQKVMKEIGNRMEKFA 156 (362)
Q Consensus 77 qaIleA~~g~~~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~~~~~~~~~~~~~~~~~~l~etg~rL~~fA 156 (362)
..|++.+.-.+..+|+|+|.|.|. +...|+.+ -|.+++|+++.+ ..++...+++
T Consensus 192 ~~l~~~~~~~~~~~vlDvG~G~G~----~~~~l~~~---~p~~~~~~~D~~---------------~~~~~a~~~~---- 245 (369)
T 3gwz_A 192 GQVAAAYDFSGAATAVDIGGGRGS----LMAAVLDA---FPGLRGTLLERP---------------PVAEEARELL---- 245 (369)
T ss_dssp HHHHHHSCCTTCSEEEEETCTTSH----HHHHHHHH---CTTCEEEEEECH---------------HHHHHHHHHH----
T ss_pred HHHHHhCCCccCcEEEEeCCCccH----HHHHHHHH---CCCCeEEEEcCH---------------HHHHHHHHhh----
Confidence 456777665667899999999995 55555554 256899999852 2344444433
Q ss_pred HHcCC--cEEEEEeeccCCcccCccccccccCCCeEEEeccccccccccccCcHHHHHHHH-HhcCCcEEEE-Ecc
Q 035867 157 RLMGV--PFEFNVIHHVGDLCDLNLAELDVRSDEALAINCIGALHTIAAVDDRRDVLISNL-RSLQPRIITV-VEE 228 (362)
Q Consensus 157 ~~~gv--pfeF~~v~~~~~~e~l~~~~l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~vvvl-vE~ 228 (362)
...|+ ..+|..- ++.+- +.. .-++++ |...||+..+ .....+|+.+ +.|+|.-.++ +|.
T Consensus 246 ~~~~l~~~v~~~~~----d~~~~----~p~-~~D~v~--~~~vlh~~~d--~~~~~~L~~~~~~L~pgG~l~i~e~ 308 (369)
T 3gwz_A 246 TGRGLADRCEILPG----DFFET----IPD-GADVYL--IKHVLHDWDD--DDVVRILRRIATAMKPDSRLLVIDN 308 (369)
T ss_dssp HHTTCTTTEEEEEC----CTTTC----CCS-SCSEEE--EESCGGGSCH--HHHHHHHHHHHTTCCTTCEEEEEEE
T ss_pred hhcCcCCceEEecc----CCCCC----CCC-CceEEE--hhhhhccCCH--HHHHHHHHHHHHHcCCCCEEEEEEe
Confidence 33454 3666443 33311 111 223443 3344687742 2233577766 5579976554 454
No 28
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=86.71 E-value=7.2 Score=34.25 Aligned_cols=111 Identities=16% Similarity=0.164 Sum_probs=62.3
Q ss_pred HHHHHhhhcCCCeeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccCCCCCCCCCCCchhHHHHHHHHHHHHHHH
Q 035867 76 NGAIMEAFEGESKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTSKPVGGSGAGGLAAVQKVMKEIGNRMEKF 155 (362)
Q Consensus 76 NqaIleA~~g~~~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~~~~~~~~~~~~~~~~~~l~etg~rL~~f 155 (362)
...|++.+.-...-+|+|+|.|.|. +...|+.+.+ .++|||+.+. ..++... +.
T Consensus 25 ~~~l~~~~~~~~~~~VLDiGcG~G~----~~~~la~~~~----~~v~gvD~s~--------------~~l~~a~----~~ 78 (256)
T 1nkv_A 25 YATLGRVLRMKPGTRILDLGSGSGE----MLCTWARDHG----ITGTGIDMSS--------------LFTAQAK----RR 78 (256)
T ss_dssp HHHHHHHTCCCTTCEEEEETCTTCH----HHHHHHHHTC----CEEEEEESCH--------------HHHHHHH----HH
T ss_pred HHHHHHhcCCCCCCEEEEECCCCCH----HHHHHHHhcC----CeEEEEeCCH--------------HHHHHHH----HH
Confidence 3455565554455689999999886 3444554432 3689998642 2344333 33
Q ss_pred HHHcCCc--EEEEEeeccCCcccCccccccccCCCeEEEeccccccccccccCcHHHHHHH-HHhcCCcEEEEE
Q 035867 156 ARLMGVP--FEFNVIHHVGDLCDLNLAELDVRSDEALAINCIGALHTIAAVDDRRDVLISN-LRSLQPRIITVV 226 (362)
Q Consensus 156 A~~~gvp--feF~~v~~~~~~e~l~~~~l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~-ir~L~P~vvvlv 226 (362)
++..|++ .+|.. .+++++.. ++..=+|-|...+||+. ++ ..+|+. .+-|+|.-.+++
T Consensus 79 ~~~~~~~~~v~~~~----~d~~~~~~------~~~fD~V~~~~~~~~~~---~~-~~~l~~~~r~LkpgG~l~~ 138 (256)
T 1nkv_A 79 AEELGVSERVHFIH----NDAAGYVA------NEKCDVAACVGATWIAG---GF-AGAEELLAQSLKPGGIMLI 138 (256)
T ss_dssp HHHTTCTTTEEEEE----SCCTTCCC------SSCEEEEEEESCGGGTS---SS-HHHHHHHTTSEEEEEEEEE
T ss_pred HHhcCCCcceEEEE----CChHhCCc------CCCCCEEEECCChHhcC---CH-HHHHHHHHHHcCCCeEEEE
Confidence 4456664 66643 24554422 22222344555678874 33 445554 466799876654
No 29
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=86.68 E-value=4.2 Score=36.72 Aligned_cols=110 Identities=11% Similarity=0.154 Sum_probs=60.4
Q ss_pred HHHHhhhcCCCeeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccCCCCCCCCCCCchhHHHHHHHHHHHHHHHH
Q 035867 77 GAIMEAFEGESKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTSKPVGGSGAGGLAAVQKVMKEIGNRMEKFA 156 (362)
Q Consensus 77 qaIleA~~g~~~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~~~~~~~~~~~~~~~~~~l~etg~rL~~fA 156 (362)
..|++.+.-...-+|+|+|.|.|. +...|+.+.+ .++|||+.+. ..++.+.++ +
T Consensus 54 ~~~~~~~~~~~~~~vLDiGcG~G~----~~~~l~~~~~----~~v~gvd~s~--------------~~~~~a~~~----~ 107 (287)
T 1kpg_A 54 DLALGKLGLQPGMTLLDVGCGWGA----TMMRAVEKYD----VNVVGLTLSK--------------NQANHVQQL----V 107 (287)
T ss_dssp HHHHTTTTCCTTCEEEEETCTTSH----HHHHHHHHHC----CEEEEEESCH--------------HHHHHHHHH----H
T ss_pred HHHHHHcCCCCcCEEEEECCcccH----HHHHHHHHcC----CEEEEEECCH--------------HHHHHHHHH----H
Confidence 345666654556689999998875 4555554332 2899998642 234333333 3
Q ss_pred HHcCCc--EEEEEeeccCCcccCccccccccCCCeEEEeccccccccccccCcHHHHHHH-HHhcCCcEEEEE
Q 035867 157 RLMGVP--FEFNVIHHVGDLCDLNLAELDVRSDEALAINCIGALHTIAAVDDRRDVLISN-LRSLQPRIITVV 226 (362)
Q Consensus 157 ~~~gvp--feF~~v~~~~~~e~l~~~~l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~-ir~L~P~vvvlv 226 (362)
+..|++ .+|.. .+++++. ..=+.|+ |...+||+.. .....+|+. .+-|+|.-.+++
T Consensus 108 ~~~~~~~~~~~~~----~d~~~~~------~~fD~v~--~~~~l~~~~~--~~~~~~l~~~~~~LkpgG~l~~ 166 (287)
T 1kpg_A 108 ANSENLRSKRVLL----AGWEQFD------EPVDRIV--SIGAFEHFGH--ERYDAFFSLAHRLLPADGVMLL 166 (287)
T ss_dssp HTCCCCSCEEEEE----SCGGGCC------CCCSEEE--EESCGGGTCT--TTHHHHHHHHHHHSCTTCEEEE
T ss_pred HhcCCCCCeEEEE----CChhhCC------CCeeEEE--EeCchhhcCh--HHHHHHHHHHHHhcCCCCEEEE
Confidence 345553 44422 3454442 1113333 4446788852 234555655 466899866654
No 30
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=85.53 E-value=7.7 Score=32.39 Aligned_cols=111 Identities=14% Similarity=0.095 Sum_probs=61.3
Q ss_pred HHHHHhhhcCCCeeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccCCCCCCCCCCCchhHHHHHHHHHHHHHHH
Q 035867 76 NGAIMEAFEGESKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTSKPVGGSGAGGLAAVQKVMKEIGNRMEKF 155 (362)
Q Consensus 76 NqaIleA~~g~~~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~~~~~~~~~~~~~~~~~~l~etg~rL~~f 155 (362)
++.|++.+...+.-+|+|+|.|.|. +...|+.+ + .++|||+.+. ..++.+.++
T Consensus 21 ~~~l~~~~~~~~~~~vLdiG~G~G~----~~~~l~~~-~----~~v~~vD~s~--------------~~~~~a~~~---- 73 (199)
T 2xvm_A 21 HSEVLEAVKVVKPGKTLDLGCGNGR----NSLYLAAN-G----YDVDAWDKNA--------------MSIANVERI---- 73 (199)
T ss_dssp CHHHHHHTTTSCSCEEEEETCTTSH----HHHHHHHT-T----CEEEEEESCH--------------HHHHHHHHH----
T ss_pred cHHHHHHhhccCCCeEEEEcCCCCH----HHHHHHHC-C----CeEEEEECCH--------------HHHHHHHHH----
Confidence 3456666664445599999999885 45566665 2 3899998642 234333333
Q ss_pred HHHcCC-cEEEEEeeccCCcccCccccccccCCCeEEEeccccccccccccCcHHHHHHHH-HhcCCcEEEE
Q 035867 156 ARLMGV-PFEFNVIHHVGDLCDLNLAELDVRSDEALAINCIGALHTIAAVDDRRDVLISNL-RSLQPRIITV 225 (362)
Q Consensus 156 A~~~gv-pfeF~~v~~~~~~e~l~~~~l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~vvvl 225 (362)
++..++ ..+|.. .++.++. . ++..=+|-+...+||+. ......+|+.+ +.|+|.-.++
T Consensus 74 ~~~~~~~~~~~~~----~d~~~~~-----~-~~~~D~v~~~~~l~~~~--~~~~~~~l~~~~~~L~~gG~l~ 133 (199)
T 2xvm_A 74 KSIENLDNLHTRV----VDLNNLT-----F-DRQYDFILSTVVLMFLE--AKTIPGLIANMQRCTKPGGYNL 133 (199)
T ss_dssp HHHHTCTTEEEEE----CCGGGCC-----C-CCCEEEEEEESCGGGSC--GGGHHHHHHHHHHTEEEEEEEE
T ss_pred HHhCCCCCcEEEE----cchhhCC-----C-CCCceEEEEcchhhhCC--HHHHHHHHHHHHHhcCCCeEEE
Confidence 233455 455533 2444432 1 22222233444578874 22355666655 6679987654
No 31
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=85.53 E-value=7.2 Score=34.23 Aligned_cols=110 Identities=13% Similarity=0.205 Sum_probs=58.5
Q ss_pred HHhhhcCCCeeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHH
Q 035867 79 IMEAFEGESKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTSKPVGGSGAGGLAAVQKVMKEIGNRMEKFARL 158 (362)
Q Consensus 79 IleA~~g~~~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~~~~~~~~~~~~~~~~~~l~etg~rL~~fA~~ 158 (362)
+++.....+.-+|+|+|.|.|. +...|+.+ + .++|||+.+. ..++.+.+++ +.
T Consensus 33 ~~~~~~~~~~~~vLDlGcG~G~----~~~~l~~~-~----~~v~gvD~s~--------------~~l~~a~~~~----~~ 85 (252)
T 1wzn_A 33 IFKEDAKREVRRVLDLACGTGI----PTLELAER-G----YEVVGLDLHE--------------EMLRVARRKA----KE 85 (252)
T ss_dssp HHHHTCSSCCCEEEEETCTTCH----HHHHHHHT-T----CEEEEEESCH--------------HHHHHHHHHH----HH
T ss_pred HHHHhcccCCCEEEEeCCCCCH----HHHHHHHC-C----CeEEEEECCH--------------HHHHHHHHHH----Hh
Confidence 3444433445689999999884 45556665 2 3799998653 2344444333 34
Q ss_pred cCCcEEEEEeeccCCcccCccccccccCCCeEEEeccc-cccccccccCcHHHHHHHH-HhcCCcEEEEEc
Q 035867 159 MGVPFEFNVIHHVGDLCDLNLAELDVRSDEALAINCIG-ALHTIAAVDDRRDVLISNL-RSLQPRIITVVE 227 (362)
Q Consensus 159 ~gvpfeF~~v~~~~~~e~l~~~~l~~~~~E~laVN~~~-~Lh~l~~~~~~~~~~L~~i-r~L~P~vvvlvE 227 (362)
.|+..+|.. .++.++... ..=+.|+ |.+ .+|++. ......+|+.+ +.|+|.-+++++
T Consensus 86 ~~~~v~~~~----~d~~~~~~~----~~fD~v~--~~~~~~~~~~--~~~~~~~l~~~~~~L~pgG~li~~ 144 (252)
T 1wzn_A 86 RNLKIEFLQ----GDVLEIAFK----NEFDAVT--MFFSTIMYFD--EEDLRKLFSKVAEALKPGGVFITD 144 (252)
T ss_dssp TTCCCEEEE----SCGGGCCCC----SCEEEEE--ECSSGGGGSC--HHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cCCceEEEE----CChhhcccC----CCccEEE--EcCCchhcCC--HHHHHHHHHHHHHHcCCCeEEEEe
Confidence 466655533 244443221 1112332 322 233332 12345566654 668999888875
No 32
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=85.26 E-value=22 Score=32.34 Aligned_cols=136 Identities=14% Similarity=0.106 Sum_probs=71.3
Q ss_pred HHHHHhcCCchhhhHHHHHHHHHhh----hc-CCCeeEEEeccCCC---CCCcHHHHHHHhcCCCCCCeeEEEEeccCCC
Q 035867 58 VLKFQEVSPWTTFGHVACNGAIMEA----FE-GESKLHIVDISNTY---CTQWPTLLEALATRTDDTPHLRLTTVVTSKP 129 (362)
Q Consensus 58 ~~~f~~~~P~~~fa~~taNqaIleA----~~-g~~~VHIIDf~i~~---G~QWpsLiq~La~R~~gpP~lrIT~i~~~~~ 129 (362)
...+.++.|-+. .....|+..++. +. ....-+|+|+|.|. |. .. +.++.+ -|..++|+|+.+.
T Consensus 44 ~~~~~~~~p~~~-~~a~~~~~~~~~~~~~l~~~~~~~~vLDlGcG~pt~G~-~~---~~~~~~---~p~~~v~~vD~sp- 114 (274)
T 2qe6_A 44 ADYACKHIPGLK-ESAIENRKVLVRGVRFLAGEAGISQFLDLGSGLPTVQN-TH---EVAQSV---NPDARVVYVDIDP- 114 (274)
T ss_dssp HHHHHHHSTTHH-HHHHHHHHHHHHHHHHHHTTTCCCEEEEETCCSCCSSC-HH---HHHHHH---CTTCEEEEEESSH-
T ss_pred HHHHHHhcchhH-HHHHHHhHHHHHHHHHHhhccCCCEEEEECCCCCCCCh-HH---HHHHHh---CCCCEEEEEECCh-
Confidence 334555666543 223455555443 23 22234899999998 73 33 333322 1447899998642
Q ss_pred CCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCcEEEEEeeccCCcccCcc--ccc----cccCCCeEEEecccccccccc
Q 035867 130 VGGSGAGGLAAVQKVMKEIGNRMEKFARLMGVPFEFNVIHHVGDLCDLNL--AEL----DVRSDEALAINCIGALHTIAA 203 (362)
Q Consensus 130 ~~~~~~~~~~~~~~~l~etg~rL~~fA~~~gvpfeF~~v~~~~~~e~l~~--~~l----~~~~~E~laVN~~~~Lh~l~~ 203 (362)
..|+...+++. . .-..+|.. .++.+... ... .+..+...+|-+...||++.+
T Consensus 115 -------------~~l~~Ar~~~~---~--~~~v~~~~----~D~~~~~~~~~~~~~~~~~d~~~~d~v~~~~vlh~~~d 172 (274)
T 2qe6_A 115 -------------MVLTHGRALLA---K--DPNTAVFT----ADVRDPEYILNHPDVRRMIDFSRPAAIMLVGMLHYLSP 172 (274)
T ss_dssp -------------HHHHHHHHHHT---T--CTTEEEEE----CCTTCHHHHHHSHHHHHHCCTTSCCEEEETTTGGGSCT
T ss_pred -------------HHHHHHHHhcC---C--CCCeEEEE----eeCCCchhhhccchhhccCCCCCCEEEEEechhhhCCc
Confidence 23544444431 1 12344532 24443211 000 122234566667777899964
Q ss_pred ccCcHHHHHHHHHh-cCCcEEEEE
Q 035867 204 VDDRRDVLISNLRS-LQPRIITVV 226 (362)
Q Consensus 204 ~~~~~~~~L~~ir~-L~P~vvvlv 226 (362)
. ....+|+.+++ |+|.-.+++
T Consensus 173 ~--~~~~~l~~~~~~L~pGG~l~i 194 (274)
T 2qe6_A 173 D--VVDRVVGAYRDALAPGSYLFM 194 (274)
T ss_dssp T--THHHHHHHHHHHSCTTCEEEE
T ss_pred H--HHHHHHHHHHHhCCCCcEEEE
Confidence 2 45667777655 899866654
No 33
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=85.18 E-value=4 Score=35.49 Aligned_cols=103 Identities=17% Similarity=0.194 Sum_probs=56.9
Q ss_pred CeeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCcEEEE
Q 035867 87 SKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTSKPVGGSGAGGLAAVQKVMKEIGNRMEKFARLMGVPFEFN 166 (362)
Q Consensus 87 ~~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~~~~~~~~~~~~~~~~~~l~etg~rL~~fA~~~gvpfeF~ 166 (362)
+.-+|+|+|.|.|. +...|+.+ + .++|||+.+. ..++.+.+++ ...++..+|.
T Consensus 37 ~~~~vLdiG~G~G~----~~~~l~~~--~---~~~~~~D~s~--------------~~~~~a~~~~----~~~~~~~~~~ 89 (246)
T 1y8c_A 37 VFDDYLDLACGTGN----LTENLCPK--F---KNTWAVDLSQ--------------EMLSEAENKF----RSQGLKPRLA 89 (246)
T ss_dssp CTTEEEEETCTTST----THHHHGGG--S---SEEEEECSCH--------------HHHHHHHHHH----HHTTCCCEEE
T ss_pred CCCeEEEeCCCCCH----HHHHHHHC--C---CcEEEEECCH--------------HHHHHHHHHH----hhcCCCeEEE
Confidence 55689999999987 34455554 2 3799998642 2344444333 3345544552
Q ss_pred EeeccCCcccCccccccccCCCeEEEeccc-cccccccccCcHHHHHHHH-HhcCCcEEEEEc
Q 035867 167 VIHHVGDLCDLNLAELDVRSDEALAINCIG-ALHTIAAVDDRRDVLISNL-RSLQPRIITVVE 227 (362)
Q Consensus 167 ~v~~~~~~e~l~~~~l~~~~~E~laVN~~~-~Lh~l~~~~~~~~~~L~~i-r~L~P~vvvlvE 227 (362)
. .++.++.. . +..=+|-|.. .|||+.... ....+|+.+ +.|+|.-+++++
T Consensus 90 ~----~d~~~~~~-----~-~~fD~v~~~~~~l~~~~~~~-~~~~~l~~~~~~L~pgG~l~~~ 141 (246)
T 1y8c_A 90 C----QDISNLNI-----N-RKFDLITCCLDSTNYIIDSD-DLKKYFKAVSNHLKEGGVFIFD 141 (246)
T ss_dssp C----CCGGGCCC-----S-CCEEEEEECTTGGGGCCSHH-HHHHHHHHHHTTEEEEEEEEEE
T ss_pred e----cccccCCc-----c-CCceEEEEcCccccccCCHH-HHHHHHHHHHHhcCCCcEEEEE
Confidence 2 34444321 1 2222233444 678884322 344566655 567998777763
No 34
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=85.02 E-value=9.9 Score=33.76 Aligned_cols=111 Identities=21% Similarity=0.295 Sum_probs=63.1
Q ss_pred HHHHhhhcCCCeeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccCCCCCCCCCCCchhHHHHHHHHHHHHHHHH
Q 035867 77 GAIMEAFEGESKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTSKPVGGSGAGGLAAVQKVMKEIGNRMEKFA 156 (362)
Q Consensus 77 qaIleA~~g~~~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~~~~~~~~~~~~~~~~~~l~etg~rL~~fA 156 (362)
..|++.+.-...-+|+|+|.|.|. +...|+.+.+ .++|||+.+. ..++...+ .+
T Consensus 51 ~~l~~~~~~~~~~~vLDiGcG~G~----~~~~l~~~~~----~~v~gvD~s~--------------~~~~~a~~----~~ 104 (273)
T 3bus_A 51 DEMIALLDVRSGDRVLDVGCGIGK----PAVRLATARD----VRVTGISISR--------------PQVNQANA----RA 104 (273)
T ss_dssp HHHHHHSCCCTTCEEEEESCTTSH----HHHHHHHHSC----CEEEEEESCH--------------HHHHHHHH----HH
T ss_pred HHHHHhcCCCCCCEEEEeCCCCCH----HHHHHHHhcC----CEEEEEeCCH--------------HHHHHHHH----HH
Confidence 455666654556699999998875 4445555432 5899998642 23433333 33
Q ss_pred HHcCCc--EEEEEeeccCCcccCccccccccCCCeEEEeccccccccccccCcHHHHHHHH-HhcCCcEEEEE
Q 035867 157 RLMGVP--FEFNVIHHVGDLCDLNLAELDVRSDEALAINCIGALHTIAAVDDRRDVLISNL-RSLQPRIITVV 226 (362)
Q Consensus 157 ~~~gvp--feF~~v~~~~~~e~l~~~~l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~vvvlv 226 (362)
+..|++ .+|.. .+++++. ..++..=+|-+...+||+. + .+.+|+.+ +-|+|.-.+++
T Consensus 105 ~~~~~~~~~~~~~----~d~~~~~-----~~~~~fD~v~~~~~l~~~~---~-~~~~l~~~~~~L~pgG~l~i 164 (273)
T 3bus_A 105 TAAGLANRVTFSY----ADAMDLP-----FEDASFDAVWALESLHHMP---D-RGRALREMARVLRPGGTVAI 164 (273)
T ss_dssp HHTTCTTTEEEEE----CCTTSCC-----SCTTCEEEEEEESCTTTSS---C-HHHHHHHHHTTEEEEEEEEE
T ss_pred HhcCCCcceEEEE----CccccCC-----CCCCCccEEEEechhhhCC---C-HHHHHHHHHHHcCCCeEEEE
Confidence 445654 55533 2444432 2233333444555678884 2 35666655 55799866654
No 35
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=84.94 E-value=11 Score=33.95 Aligned_cols=111 Identities=12% Similarity=0.132 Sum_probs=62.5
Q ss_pred HHHHhhh----cCCCeeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccCCCCCCCCCCCchhHHHHHHHHHHHH
Q 035867 77 GAIMEAF----EGESKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTSKPVGGSGAGGLAAVQKVMKEIGNRM 152 (362)
Q Consensus 77 qaIleA~----~g~~~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~~~~~~~~~~~~~~~~~~l~etg~rL 152 (362)
..|++.+ .-...-+|+|+|.|.|.. ...|+.+.+ .++|||+.+. ..++.+.++
T Consensus 68 ~~l~~~l~~~~~~~~~~~vLDiGcG~G~~----~~~l~~~~~----~~v~gvD~s~--------------~~~~~a~~~- 124 (297)
T 2o57_A 68 EWLASELAMTGVLQRQAKGLDLGAGYGGA----ARFLVRKFG----VSIDCLNIAP--------------VQNKRNEEY- 124 (297)
T ss_dssp HHHHHHHHHTTCCCTTCEEEEETCTTSHH----HHHHHHHHC----CEEEEEESCH--------------HHHHHHHHH-
T ss_pred HHHHHHhhhccCCCCCCEEEEeCCCCCHH----HHHHHHHhC----CEEEEEeCCH--------------HHHHHHHHH-
Confidence 4556666 334556899999998863 333444322 3899998642 234433333
Q ss_pred HHHHHHcCCc--EEEEEeeccCCcccCccccccccCCCeEEEeccccccccccccCcHHHHHHH-HHhcCCcEEEEE
Q 035867 153 EKFARLMGVP--FEFNVIHHVGDLCDLNLAELDVRSDEALAINCIGALHTIAAVDDRRDVLISN-LRSLQPRIITVV 226 (362)
Q Consensus 153 ~~fA~~~gvp--feF~~v~~~~~~e~l~~~~l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~-ir~L~P~vvvlv 226 (362)
++..|++ .+|.. .+++++. ..++..=+|-|...+||+. + ...+|+. .+-|+|.-.+++
T Consensus 125 ---~~~~~~~~~~~~~~----~d~~~~~-----~~~~~fD~v~~~~~l~~~~---~-~~~~l~~~~~~LkpgG~l~~ 185 (297)
T 2o57_A 125 ---NNQAGLADNITVKY----GSFLEIP-----CEDNSYDFIWSQDAFLHSP---D-KLKVFQECARVLKPRGVMAI 185 (297)
T ss_dssp ---HHHHTCTTTEEEEE----CCTTSCS-----SCTTCEEEEEEESCGGGCS---C-HHHHHHHHHHHEEEEEEEEE
T ss_pred ---HHhcCCCcceEEEE----cCcccCC-----CCCCCEeEEEecchhhhcC---C-HHHHHHHHHHHcCCCeEEEE
Confidence 3344553 55533 2455432 2334344455666788885 2 4555654 566799866653
No 36
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=84.44 E-value=8.1 Score=35.17 Aligned_cols=111 Identities=14% Similarity=0.069 Sum_probs=60.9
Q ss_pred CCeeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCcEEE
Q 035867 86 ESKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTSKPVGGSGAGGLAAVQKVMKEIGNRMEKFARLMGVPFEF 165 (362)
Q Consensus 86 ~~~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~~~~~~~~~~~~~~~~~~l~etg~rL~~fA~~~gvpfeF 165 (362)
...-+|+|+|.|.|. +...|+.+- +|..++|||+.+. ..++.+.+++.+. ....-..+|
T Consensus 35 ~~~~~vLDiGcG~G~----~~~~la~~~--~~~~~v~gvD~s~--------------~~~~~a~~~~~~~-~~~~~~v~~ 93 (299)
T 3g5t_A 35 GERKLLVDVGCGPGT----ATLQMAQEL--KPFEQIIGSDLSA--------------TMIKTAEVIKEGS-PDTYKNVSF 93 (299)
T ss_dssp SCCSEEEEETCTTTH----HHHHHHHHS--SCCSEEEEEESCH--------------HHHHHHHHHHHHC-C-CCTTEEE
T ss_pred CCCCEEEEECCCCCH----HHHHHHHhC--CCCCEEEEEeCCH--------------HHHHHHHHHHHhc-cCCCCceEE
Confidence 456789999999884 455555421 1446899998653 2344333332211 001345566
Q ss_pred EEeeccCCcccCcccc-ccccCCCeEEEeccccccccccccCcHHHHHH-HHHhcCCcEEEEE
Q 035867 166 NVIHHVGDLCDLNLAE-LDVRSDEALAINCIGALHTIAAVDDRRDVLIS-NLRSLQPRIITVV 226 (362)
Q Consensus 166 ~~v~~~~~~e~l~~~~-l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~-~ir~L~P~vvvlv 226 (362)
.. .+++++.... ..+.++..=+|-|...+||+ + .+.+|+ ..+.|+|.-.+++
T Consensus 94 ~~----~d~~~~~~~~~~~~~~~~fD~V~~~~~l~~~----~-~~~~l~~~~~~LkpgG~l~i 147 (299)
T 3g5t_A 94 KI----SSSDDFKFLGADSVDKQKIDMITAVECAHWF----D-FEKFQRSAYANLRKDGTIAI 147 (299)
T ss_dssp EE----CCTTCCGGGCTTTTTSSCEEEEEEESCGGGS----C-HHHHHHHHHHHEEEEEEEEE
T ss_pred EE----cCHHhCCccccccccCCCeeEEeHhhHHHHh----C-HHHHHHHHHHhcCCCcEEEE
Confidence 43 3566554322 11222444455566678988 2 344555 4566899877654
No 37
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=84.39 E-value=4.9 Score=38.56 Aligned_cols=113 Identities=14% Similarity=0.143 Sum_probs=65.1
Q ss_pred HHHHhhhcCCCeeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccCCCCCCCCCCCchhHHHHHHHHHHHHHHHH
Q 035867 77 GAIMEAFEGESKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTSKPVGGSGAGGLAAVQKVMKEIGNRMEKFA 156 (362)
Q Consensus 77 qaIleA~~g~~~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~~~~~~~~~~~~~~~~~~l~etg~rL~~fA 156 (362)
++|++...-.+.-.|+|+|.|.| .+...++.+ |. -++|||+.+ .. ++.+ .+.+
T Consensus 53 ~~i~~~~~~~~~~~VLDlGcGtG----~ls~~la~~--g~--~~V~gvD~s-~~--------------~~~a----~~~~ 105 (376)
T 3r0q_C 53 NAVFQNKHHFEGKTVLDVGTGSG----ILAIWSAQA--GA--RKVYAVEAT-KM--------------ADHA----RALV 105 (376)
T ss_dssp HHHHTTTTTTTTCEEEEESCTTT----HHHHHHHHT--TC--SEEEEEESS-TT--------------HHHH----HHHH
T ss_pred HHHHhccccCCCCEEEEeccCcC----HHHHHHHhc--CC--CEEEEEccH-HH--------------HHHH----HHHH
Confidence 44555444445568999999998 345556665 21 389999976 31 2222 2334
Q ss_pred HHcCCc--EEEEEeeccCCcccCccccccccCCCeEEEeccccccccccccCcHHHHHHHH-HhcCCcEEEEEc
Q 035867 157 RLMGVP--FEFNVIHHVGDLCDLNLAELDVRSDEALAINCIGALHTIAAVDDRRDVLISNL-RSLQPRIITVVE 227 (362)
Q Consensus 157 ~~~gvp--feF~~v~~~~~~e~l~~~~l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~vvvlvE 227 (362)
+..|++ .+| +. .+++++... ..=+.|+.|.+ .|.+. ....++.+|+.+ +-|+|.-+++..
T Consensus 106 ~~~~~~~~v~~--~~--~d~~~~~~~----~~~D~Iv~~~~--~~~l~-~e~~~~~~l~~~~~~LkpgG~li~~ 168 (376)
T 3r0q_C 106 KANNLDHIVEV--IE--GSVEDISLP----EKVDVIISEWM--GYFLL-RESMFDSVISARDRWLKPTGVMYPS 168 (376)
T ss_dssp HHTTCTTTEEE--EE--SCGGGCCCS----SCEEEEEECCC--BTTBT-TTCTHHHHHHHHHHHEEEEEEEESS
T ss_pred HHcCCCCeEEE--EE--CchhhcCcC----CcceEEEEcCh--hhccc-chHHHHHHHHHHHhhCCCCeEEEEe
Confidence 556765 555 32 356665432 12234444442 23332 234577888887 889999888754
No 38
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=84.30 E-value=7.7 Score=38.52 Aligned_cols=126 Identities=12% Similarity=0.143 Sum_probs=68.9
Q ss_pred HHHHHHHhhhcCCCeeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccCCCCCCCCCCCchhHHHHHHHHHHHHH
Q 035867 74 ACNGAIMEAFEGESKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTSKPVGGSGAGGLAAVQKVMKEIGNRME 153 (362)
Q Consensus 74 taNqaIleA~~g~~~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~~~~~~~~~~~~~~~~~~l~etg~rL~ 153 (362)
..-..|++.+.-...=+|+|+|.|.|. +.-.+|.+.+ .-+++||+.+.. +.+.-++.-++..
T Consensus 160 ~~i~~il~~l~l~~gd~VLDLGCGtG~----l~l~lA~~~g---~~kVvGIDiS~~-----------~lelAr~n~e~fr 221 (438)
T 3uwp_A 160 DLVAQMIDEIKMTDDDLFVDLGSGVGQ----VVLQVAAATN---CKHHYGVEKADI-----------PAKYAETMDREFR 221 (438)
T ss_dssp HHHHHHHHHHCCCTTCEEEEESCTTSH----HHHHHHHHCC---CSEEEEEECCHH-----------HHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCCCCEEEEeCCCCCH----HHHHHHHHCC---CCEEEEEeCCHH-----------HHHHHHHHHHHHH
Confidence 344567777765555679999999885 3334444332 237999986531 1111111111222
Q ss_pred HHHHHcCCc-EEEEEeeccCCcccCccccccccCCCeEEEeccccccccccccCcHHHHHHHHHhcCCcEEEEE
Q 035867 154 KFARLMGVP-FEFNVIHHVGDLCDLNLAELDVRSDEALAINCIGALHTIAAVDDRRDVLISNLRSLQPRIITVV 226 (362)
Q Consensus 154 ~fA~~~gvp-feF~~v~~~~~~e~l~~~~l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~ir~L~P~vvvlv 226 (362)
+.++..|+. -.+..+. +++.++.... .+..-++|++|..+ + . ++....+....|.|+|.-.+++
T Consensus 222 kr~~~~Gl~~~rVefi~--GD~~~lp~~d-~~~~aDVVf~Nn~~--F-~---pdl~~aL~Ei~RvLKPGGrIVs 286 (438)
T 3uwp_A 222 KWMKWYGKKHAEYTLER--GDFLSEEWRE-RIANTSVIFVNNFA--F-G---PEVDHQLKERFANMKEGGRIVS 286 (438)
T ss_dssp HHHHHHTBCCCEEEEEE--CCTTSHHHHH-HHHTCSEEEECCTT--C-C---HHHHHHHHHHHTTSCTTCEEEE
T ss_pred HHHHHhCCCCCCeEEEE--CcccCCcccc-ccCCccEEEEcccc--c-C---chHHHHHHHHHHcCCCCcEEEE
Confidence 345666762 2343342 4666553321 12234577788764 2 1 2445556667789999887774
No 39
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=83.87 E-value=8.6 Score=35.03 Aligned_cols=112 Identities=11% Similarity=0.132 Sum_probs=64.4
Q ss_pred HHHHhhhcCCCeeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccCCCCCCCCCCCchhHHHHHHHHHHHHHHHH
Q 035867 77 GAIMEAFEGESKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTSKPVGGSGAGGLAAVQKVMKEIGNRMEKFA 156 (362)
Q Consensus 77 qaIleA~~g~~~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~~~~~~~~~~~~~~~~~~l~etg~rL~~fA 156 (362)
..|++.+.-...-+|+|+|.|.|. +...|+.+.+ .++|||+.+. ..++.+.++ +
T Consensus 62 ~~~~~~~~~~~~~~vLDiGcG~G~----~~~~la~~~~----~~v~gvD~s~--------------~~~~~a~~~----~ 115 (302)
T 3hem_A 62 KLALDKLNLEPGMTLLDIGCGWGS----TMRHAVAEYD----VNVIGLTLSE--------------NQYAHDKAM----F 115 (302)
T ss_dssp HHHHHTTCCCTTCEEEEETCTTSH----HHHHHHHHHC----CEEEEEECCH--------------HHHHHHHHH----H
T ss_pred HHHHHHcCCCCcCEEEEeeccCcH----HHHHHHHhCC----CEEEEEECCH--------------HHHHHHHHH----H
Confidence 446666655566789999998774 4555555432 5799998642 234433333 3
Q ss_pred HHcCCc--EEEEEeeccCCcccCccccccccCCCeEEEeccccccccccc-----cCcHHHHHHHH-HhcCCcEEEEE
Q 035867 157 RLMGVP--FEFNVIHHVGDLCDLNLAELDVRSDEALAINCIGALHTIAAV-----DDRRDVLISNL-RSLQPRIITVV 226 (362)
Q Consensus 157 ~~~gvp--feF~~v~~~~~~e~l~~~~l~~~~~E~laVN~~~~Lh~l~~~-----~~~~~~~L~~i-r~L~P~vvvlv 226 (362)
+..|++ .+|.. .++.++ . ..=+.|+. ...+||+.+. ....+.+|+.+ +-|+|.-.+++
T Consensus 116 ~~~~~~~~v~~~~----~d~~~~-~-----~~fD~v~~--~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i 181 (302)
T 3hem_A 116 DEVDSPRRKEVRI----QGWEEF-D-----EPVDRIVS--LGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLL 181 (302)
T ss_dssp HHSCCSSCEEEEE----CCGGGC-C-----CCCSEEEE--ESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEE
T ss_pred HhcCCCCceEEEE----CCHHHc-C-----CCccEEEE--cchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEE
Confidence 456765 44432 345443 1 11134443 3557888642 13345667655 66799877665
No 40
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=83.24 E-value=14 Score=31.62 Aligned_cols=101 Identities=14% Similarity=0.117 Sum_probs=54.9
Q ss_pred eeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCcEEEEE
Q 035867 88 KLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTSKPVGGSGAGGLAAVQKVMKEIGNRMEKFARLMGVPFEFNV 167 (362)
Q Consensus 88 ~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~~~~~~~~~~~~~~~~~~l~etg~rL~~fA~~~gvpfeF~~ 167 (362)
.-+|+|+|.|.|. +...|+.+ ++ ++|||+.+. ..++.+.++ ++..+...+|..
T Consensus 39 ~~~vLDlG~G~G~----~~~~l~~~--~~---~v~~vD~s~--------------~~~~~a~~~----~~~~~~~~~~~~ 91 (227)
T 1ve3_A 39 RGKVLDLACGVGG----FSFLLEDY--GF---EVVGVDISE--------------DMIRKAREY----AKSRESNVEFIV 91 (227)
T ss_dssp CCEEEEETCTTSH----HHHHHHHT--TC---EEEEEESCH--------------HHHHHHHHH----HHHTTCCCEEEE
T ss_pred CCeEEEEeccCCH----HHHHHHHc--CC---EEEEEECCH--------------HHHHHHHHH----HHhcCCCceEEE
Confidence 4589999999883 45566665 33 899998652 234333333 233344455533
Q ss_pred eeccCCcccCccccccccCCCeEEEeccccccccccccCcHHHHHHH-HHhcCCcEEEEE
Q 035867 168 IHHVGDLCDLNLAELDVRSDEALAINCIGALHTIAAVDDRRDVLISN-LRSLQPRIITVV 226 (362)
Q Consensus 168 v~~~~~~e~l~~~~l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~-ir~L~P~vvvlv 226 (362)
.++.++.. .-..=+.|+.|..+.+++.. + ...+|+. .+.|+|.-.+++
T Consensus 92 ----~d~~~~~~---~~~~~D~v~~~~~~~~~~~~---~-~~~~l~~~~~~L~~gG~l~~ 140 (227)
T 1ve3_A 92 ----GDARKLSF---EDKTFDYVIFIDSIVHFEPL---E-LNQVFKEVRRVLKPSGKFIM 140 (227)
T ss_dssp ----CCTTSCCS---CTTCEEEEEEESCGGGCCHH---H-HHHHHHHHHHHEEEEEEEEE
T ss_pred ----CchhcCCC---CCCcEEEEEEcCchHhCCHH---H-HHHHHHHHHHHcCCCcEEEE
Confidence 24444321 11122456666555455542 2 3445554 466799866654
No 41
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=83.03 E-value=2.7 Score=36.38 Aligned_cols=116 Identities=11% Similarity=0.065 Sum_probs=61.2
Q ss_pred HHhhhcCCCeeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHH
Q 035867 79 IMEAFEGESKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTSKPVGGSGAGGLAAVQKVMKEIGNRMEKFARL 158 (362)
Q Consensus 79 IleA~~g~~~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~~~~~~~~~~~~~~~~~~l~etg~rL~~fA~~ 158 (362)
.++.+.....-+|+|+|.|.|. +...|+.+. |..++|||+.+.. .++.+.++..+-++.
T Consensus 19 ~~~~l~~~~~~~vLDiGcG~G~----~~~~la~~~---p~~~v~gvD~s~~--------------~l~~~~~~a~~~~~~ 77 (218)
T 3mq2_A 19 EFEQLRSQYDDVVLDVGTGDGK----HPYKVARQN---PSRLVVALDADKS--------------RMEKISAKAAAKPAK 77 (218)
T ss_dssp HHHHHHTTSSEEEEEESCTTCH----HHHHHHHHC---TTEEEEEEESCGG--------------GGHHHHHHHTSCGGG
T ss_pred HHHHhhccCCCEEEEecCCCCH----HHHHHHHHC---CCCEEEEEECCHH--------------HHHHHHHHHHHhhhh
Confidence 3444445566789999999885 444555542 4578999997642 233333332222334
Q ss_pred cCC-cEEEEEeeccCCcccCccccccccCCCeEEEeccc-cc--cccccccCcHHHHHH-HHHhcCCcEEEEEc
Q 035867 159 MGV-PFEFNVIHHVGDLCDLNLAELDVRSDEALAINCIG-AL--HTIAAVDDRRDVLIS-NLRSLQPRIITVVE 227 (362)
Q Consensus 159 ~gv-pfeF~~v~~~~~~e~l~~~~l~~~~~E~laVN~~~-~L--h~l~~~~~~~~~~L~-~ir~L~P~vvvlvE 227 (362)
.++ ..+|.. .+++++... -.. +.+.++..+ .+ ||+. ++. .+|+ ..+-|+|.-.+++.
T Consensus 78 ~~~~~v~~~~----~d~~~l~~~---~~~-d~v~~~~~~~~~~~~~~~---~~~-~~l~~~~~~LkpgG~l~~~ 139 (218)
T 3mq2_A 78 GGLPNLLYLW----ATAERLPPL---SGV-GELHVLMPWGSLLRGVLG---SSP-EMLRGMAAVCRPGASFLVA 139 (218)
T ss_dssp TCCTTEEEEE----CCSTTCCSC---CCE-EEEEEESCCHHHHHHHHT---SSS-HHHHHHHHTEEEEEEEEEE
T ss_pred cCCCceEEEe----cchhhCCCC---CCC-CEEEEEccchhhhhhhhc---cHH-HHHHHHHHHcCCCcEEEEE
Confidence 555 355532 355554321 111 333333322 22 2442 333 3455 45778999887763
No 42
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=82.44 E-value=9.5 Score=34.29 Aligned_cols=109 Identities=16% Similarity=0.139 Sum_probs=61.5
Q ss_pred HHhhhcCCCeeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHH
Q 035867 79 IMEAFEGESKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTSKPVGGSGAGGLAAVQKVMKEIGNRMEKFARL 158 (362)
Q Consensus 79 IleA~~g~~~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~~~~~~~~~~~~~~~~~~l~etg~rL~~fA~~ 158 (362)
+++.+... .-+|+|+|.|.|. +...|+.+ | .++|||+.+. ..++.+.++ ++.
T Consensus 61 ~l~~~~~~-~~~vLDiGcG~G~----~~~~l~~~--~---~~v~gvD~s~--------------~~~~~a~~~----~~~ 112 (285)
T 4htf_A 61 VLAEMGPQ-KLRVLDAGGGEGQ----TAIKMAER--G---HQVILCDLSA--------------QMIDRAKQA----AEA 112 (285)
T ss_dssp HHHHTCSS-CCEEEEETCTTCH----HHHHHHHT--T---CEEEEEESCH--------------HHHHHHHHH----HHC
T ss_pred HHHhcCCC-CCEEEEeCCcchH----HHHHHHHC--C---CEEEEEECCH--------------HHHHHHHHH----HHh
Confidence 44444433 5789999999984 56667766 2 4799998642 234433333 344
Q ss_pred cCCc--EEEEEeeccCCcccCccccccccCCCeEEEeccccccccccccCcHHHHHH-HHHhcCCcEEEEEc
Q 035867 159 MGVP--FEFNVIHHVGDLCDLNLAELDVRSDEALAINCIGALHTIAAVDDRRDVLIS-NLRSLQPRIITVVE 227 (362)
Q Consensus 159 ~gvp--feF~~v~~~~~~e~l~~~~l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~-~ir~L~P~vvvlvE 227 (362)
.|++ .+|.. .+++++.. ..++..=+|-|...|||+. ++ ..+|+ ..+-|+|.-++++.
T Consensus 113 ~~~~~~v~~~~----~d~~~~~~----~~~~~fD~v~~~~~l~~~~---~~-~~~l~~~~~~LkpgG~l~~~ 172 (285)
T 4htf_A 113 KGVSDNMQFIH----CAAQDVAS----HLETPVDLILFHAVLEWVA---DP-RSVLQTLWSVLRPGGVLSLM 172 (285)
T ss_dssp -CCGGGEEEEE----SCGGGTGG----GCSSCEEEEEEESCGGGCS---CH-HHHHHHHHHTEEEEEEEEEE
T ss_pred cCCCcceEEEE----cCHHHhhh----hcCCCceEEEECchhhccc---CH-HHHHHHHHHHcCCCeEEEEE
Confidence 5664 44432 34554421 1233333444556678884 33 44555 45677998777753
No 43
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=82.42 E-value=3.3 Score=39.97 Aligned_cols=110 Identities=16% Similarity=0.128 Sum_probs=62.7
Q ss_pred HHHHhhhcCCCeeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccCCCCCCCCCCCchhHHHHHHHHHHHHHHHH
Q 035867 77 GAIMEAFEGESKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTSKPVGGSGAGGLAAVQKVMKEIGNRMEKFA 156 (362)
Q Consensus 77 qaIleA~~g~~~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~~~~~~~~~~~~~~~~~~l~etg~rL~~fA 156 (362)
..|++.+.-...-.|+|+|.|.|. ++..|+.+ | .++|||+.+. ..+ +.|
T Consensus 97 ~~l~~~~~~~~~~~VLDiGcG~G~----~~~~l~~~--g---~~v~gvD~s~--------------~~~--------~~a 145 (416)
T 4e2x_A 97 RDFLATELTGPDPFIVEIGCNDGI----MLRTIQEA--G---VRHLGFEPSS--------------GVA--------AKA 145 (416)
T ss_dssp HHHHHTTTCSSSCEEEEETCTTTT----THHHHHHT--T---CEEEEECCCH--------------HHH--------HHH
T ss_pred HHHHHHhCCCCCCEEEEecCCCCH----HHHHHHHc--C---CcEEEECCCH--------------HHH--------HHH
Confidence 345555554556789999999997 56666654 2 2899998642 122 345
Q ss_pred HHcCCcEEEEEeeccCCcccCccccccccCCCeEEEeccccccccccccCcHHHHHHHH-HhcCCcEEEEEc
Q 035867 157 RLMGVPFEFNVIHHVGDLCDLNLAELDVRSDEALAINCIGALHTIAAVDDRRDVLISNL-RSLQPRIITVVE 227 (362)
Q Consensus 157 ~~~gvpfeF~~v~~~~~~e~l~~~~l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~vvvlvE 227 (362)
+..|++..-. ....-+...+...++..=+|-+...|||+. + .+.+|+.+ +-|+|.-+++++
T Consensus 146 ~~~~~~~~~~------~~~~~~~~~l~~~~~~fD~I~~~~vl~h~~---d-~~~~l~~~~r~LkpgG~l~i~ 207 (416)
T 4e2x_A 146 REKGIRVRTD------FFEKATADDVRRTEGPANVIYAANTLCHIP---Y-VQSVLEGVDALLAPDGVFVFE 207 (416)
T ss_dssp HTTTCCEECS------CCSHHHHHHHHHHHCCEEEEEEESCGGGCT---T-HHHHHHHHHHHEEEEEEEEEE
T ss_pred HHcCCCccee------eechhhHhhcccCCCCEEEEEECChHHhcC---C-HHHHHHHHHHHcCCCeEEEEE
Confidence 5556664321 111111122222234333455556689984 3 45566655 667998777764
No 44
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=82.30 E-value=9.8 Score=34.87 Aligned_cols=110 Identities=11% Similarity=0.125 Sum_probs=61.1
Q ss_pred HHHHhhhcCCCeeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccCCCCCCCCCCCchhHHHHHHHHHHHHHHHH
Q 035867 77 GAIMEAFEGESKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTSKPVGGSGAGGLAAVQKVMKEIGNRMEKFA 156 (362)
Q Consensus 77 qaIleA~~g~~~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~~~~~~~~~~~~~~~~~~l~etg~rL~~fA 156 (362)
+.|++.+.-...-+|+|+|.|.|. +...|+.+.+ .++|||+.+. ..++...++ +
T Consensus 80 ~~~~~~~~~~~~~~vLDiGcG~G~----~~~~la~~~~----~~v~gvD~s~--------------~~~~~a~~~----~ 133 (318)
T 2fk8_A 80 DLNLDKLDLKPGMTLLDIGCGWGT----TMRRAVERFD----VNVIGLTLSK--------------NQHARCEQV----L 133 (318)
T ss_dssp HHHHTTSCCCTTCEEEEESCTTSH----HHHHHHHHHC----CEEEEEESCH--------------HHHHHHHHH----H
T ss_pred HHHHHhcCCCCcCEEEEEcccchH----HHHHHHHHCC----CEEEEEECCH--------------HHHHHHHHH----H
Confidence 456666654556689999998874 4445554432 2899998642 234333332 3
Q ss_pred HHcCCc--EEEEEeeccCCcccCccccccccCCCeEEEeccccccccccccCcHHHHHHHH-HhcCCcEEEEE
Q 035867 157 RLMGVP--FEFNVIHHVGDLCDLNLAELDVRSDEALAINCIGALHTIAAVDDRRDVLISNL-RSLQPRIITVV 226 (362)
Q Consensus 157 ~~~gvp--feF~~v~~~~~~e~l~~~~l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~vvvlv 226 (362)
+..|++ .+|.. .+++++. ..=+.|+ |...+||+.. .....+|+.+ +-|+|.-.+++
T Consensus 134 ~~~~~~~~v~~~~----~d~~~~~------~~fD~v~--~~~~l~~~~~--~~~~~~l~~~~~~LkpgG~l~~ 192 (318)
T 2fk8_A 134 ASIDTNRSRQVLL----QGWEDFA------EPVDRIV--SIEAFEHFGH--ENYDDFFKRCFNIMPADGRMTV 192 (318)
T ss_dssp HTSCCSSCEEEEE----SCGGGCC------CCCSEEE--EESCGGGTCG--GGHHHHHHHHHHHSCTTCEEEE
T ss_pred HhcCCCCceEEEE----CChHHCC------CCcCEEE--EeChHHhcCH--HHHHHHHHHHHHhcCCCcEEEE
Confidence 445654 44432 3455442 1123343 3445788842 2345566554 66899866654
No 45
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=81.88 E-value=19 Score=33.48 Aligned_cols=150 Identities=15% Similarity=0.131 Sum_probs=79.6
Q ss_pred hhhHHHHHHHHHhcCCchhhhHHHHHHHHHhhh----cCC-CeeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEec
Q 035867 51 FESTRKMVLKFQEVSPWTTFGHVACNGAIMEAF----EGE-SKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVV 125 (362)
Q Consensus 51 ~~~~~~~~~~f~~~~P~~~fa~~taNqaIleA~----~g~-~~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~ 125 (362)
|+.-+.+...+.+..|-+. ...-+|.+.+.-+ .++ ..=+|+|+|.|.+.. ..+..++.+. -|.-|||+|+
T Consensus 38 ~~~Dr~~~~~~~~~~P~~~-~~a~~nr~fl~rav~~l~~~~g~~q~LDLGcG~pT~--~~~~~la~~~--~P~arVv~VD 112 (277)
T 3giw_A 38 YPADKEAGDAMSREWPALP-VHMRANRDWMNRAVAHLAKEAGIRQFLDIGTGIPTS--PNLHEIAQSV--APESRVVYVD 112 (277)
T ss_dssp CHHHHHHHHHHHHHCTTHH-HHHHHHHHHHHHHHHHHHHTSCCCEEEEESCCSCCS--SCHHHHHHHH--CTTCEEEEEE
T ss_pred CHHHHHHHHHHHHhCCCHH-HHHHHHHHHHHHHHHHhccccCCCEEEEeCCCCCcc--cHHHHHHHHH--CCCCEEEEEe
Confidence 3333455556677889874 2334787777653 222 233799999986542 1223333321 2457999998
Q ss_pred cCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCcEEEEEeeccCCcccCcc--c----cccccCCCeEEEecccccc
Q 035867 126 TSKPVGGSGAGGLAAVQKVMKEIGNRMEKFARLMGVPFEFNVIHHVGDLCDLNL--A----ELDVRSDEALAINCIGALH 199 (362)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~l~etg~rL~~fA~~~gvpfeF~~v~~~~~~e~l~~--~----~l~~~~~E~laVN~~~~Lh 199 (362)
.+. ..|+....+|.+ .-.-..+|.. .++.++.. . .=.++.++.++|-+...||
T Consensus 113 ~sp--------------~mLa~Ar~~l~~---~~~~~~~~v~----aD~~~~~~~l~~~~~~~~~D~~~p~av~~~avLH 171 (277)
T 3giw_A 113 NDP--------------IVLTLSQGLLAS---TPEGRTAYVE----ADMLDPASILDAPELRDTLDLTRPVALTVIAIVH 171 (277)
T ss_dssp CCH--------------HHHHTTHHHHCC---CSSSEEEEEE----CCTTCHHHHHTCHHHHTTCCTTSCCEEEEESCGG
T ss_pred CCh--------------HHHHHHHHHhcc---CCCCcEEEEE----ecccChhhhhcccccccccCcCCcchHHhhhhHh
Confidence 642 245444444321 1011244532 35554321 0 0013335555566666789
Q ss_pred ccccccCcHHHHHHHHHhcCCcEEEEE
Q 035867 200 TIAAVDDRRDVLISNLRSLQPRIITVV 226 (362)
Q Consensus 200 ~l~~~~~~~~~~L~~ir~L~P~vvvlv 226 (362)
++.+...+...+=+..+.|+|.-++++
T Consensus 172 ~l~d~~~p~~~l~~l~~~L~PGG~Lvl 198 (277)
T 3giw_A 172 FVLDEDDAVGIVRRLLEPLPSGSYLAM 198 (277)
T ss_dssp GSCGGGCHHHHHHHHHTTSCTTCEEEE
T ss_pred cCCchhhHHHHHHHHHHhCCCCcEEEE
Confidence 997543344444456677899876654
No 46
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=81.61 E-value=17 Score=33.18 Aligned_cols=114 Identities=15% Similarity=0.081 Sum_probs=58.9
Q ss_pred CeeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHH----cCCc
Q 035867 87 SKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTSKPVGGSGAGGLAAVQKVMKEIGNRMEKFARL----MGVP 162 (362)
Q Consensus 87 ~~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~~~~~~~~~~~~~~~~~~l~etg~rL~~fA~~----~gvp 162 (362)
+.-+|+|+|.|.|. +...|+.++ .-++|||+.+. ..++...+++...... ....
T Consensus 34 ~~~~VLDlGcG~G~----~~~~l~~~~----~~~v~gvD~s~--------------~~l~~a~~~~~~~~~~~~~~~~~~ 91 (313)
T 3bgv_A 34 RDITVLDLGCGKGG----DLLKWKKGR----INKLVCTDIAD--------------VSVKQCQQRYEDMKNRRDSEYIFS 91 (313)
T ss_dssp -CCEEEEETCTTTT----THHHHHHTT----CSEEEEEESCH--------------HHHHHHHHHHHHHHSSSCC-CCCE
T ss_pred CCCEEEEECCCCcH----HHHHHHhcC----CCEEEEEeCCH--------------HHHHHHHHHHHHhhhcccccccce
Confidence 55689999999887 334444432 34899998642 2455555544322100 1123
Q ss_pred EEEEEeeccCCcccCccc-cccccCCCeEEEeccccccccccccCcHHHHHHHH-HhcCCcEEEEE
Q 035867 163 FEFNVIHHVGDLCDLNLA-ELDVRSDEALAINCIGALHTIAAVDDRRDVLISNL-RSLQPRIITVV 226 (362)
Q Consensus 163 feF~~v~~~~~~e~l~~~-~l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~vvvlv 226 (362)
.+| +. .+++++... .+.-.++..=+|-|.+.||++.......+.+|+.+ +.|+|.-++++
T Consensus 92 ~~~--~~--~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~ 153 (313)
T 3bgv_A 92 AEF--IT--ADSSKELLIDKFRDPQMCFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIG 153 (313)
T ss_dssp EEE--EE--CCTTTSCSTTTCSSTTCCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEE
T ss_pred EEE--EE--ecccccchhhhcccCCCCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEE
Confidence 444 32 355554311 11111222333445567888732222345667665 66799877775
No 47
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=81.51 E-value=3.5 Score=39.37 Aligned_cols=43 Identities=16% Similarity=0.214 Sum_probs=30.3
Q ss_pred HHHHhhhc-CCCeeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEecc
Q 035867 77 GAIMEAFE-GESKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVT 126 (362)
Q Consensus 77 qaIleA~~-g~~~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~ 126 (362)
..|++.+. -...-+|+|+|.|.|. +...|+.+- |.+++|+++.
T Consensus 190 ~~~~~~~~~~~~~~~vlDvG~G~G~----~~~~l~~~~---p~~~~~~~D~ 233 (364)
T 3p9c_A 190 KKLLELYHGFEGLGTLVDVGGGVGA----TVAAIAAHY---PTIKGVNFDL 233 (364)
T ss_dssp HHHHHHCCTTTTCSEEEEETCTTSH----HHHHHHHHC---TTCEEEEEEC
T ss_pred HHHHHhcccccCCCEEEEeCCCCCH----HHHHHHHHC---CCCeEEEecC
Confidence 45677765 3456799999999985 455555542 5678999885
No 48
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=80.55 E-value=24 Score=32.65 Aligned_cols=109 Identities=12% Similarity=0.006 Sum_probs=59.4
Q ss_pred eeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCc-----
Q 035867 88 KLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTSKPVGGSGAGGLAAVQKVMKEIGNRMEKFARLMGVP----- 162 (362)
Q Consensus 88 ~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~~~~~~~~~~~~~~~~~~l~etg~rL~~fA~~~gvp----- 162 (362)
.-+|+|+|.|.|. .+..++.+.+ -++|||+.+. ..|+.+.++.. ..++.
T Consensus 49 ~~~VLDlGCG~G~----~l~~~~~~~~----~~v~GiD~S~--------------~~l~~A~~~~~----~~~~~~~~~~ 102 (302)
T 2vdw_A 49 KRKVLAIDFGNGA----DLEKYFYGEI----ALLVATDPDA--------------DAIARGNERYN----KLNSGIKTKY 102 (302)
T ss_dssp CCEEEETTCTTTT----THHHHHHTTC----SEEEEEESCH--------------HHHHHHHHHHH----HHCC----CC
T ss_pred CCeEEEEecCCcH----hHHHHHhcCC----CeEEEEECCH--------------HHHHHHHHHHH----hccccccccc
Confidence 4589999999885 2222333322 3699999753 34655555432 23432
Q ss_pred --EEEEEeeccCCc--ccCccccccccCCCeEEEeccccccccccccCcHHHHHHHH-HhcCCcEEEEE
Q 035867 163 --FEFNVIHHVGDL--CDLNLAELDVRSDEALAINCIGALHTIAAVDDRRDVLISNL-RSLQPRIITVV 226 (362)
Q Consensus 163 --feF~~v~~~~~~--e~l~~~~l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~vvvlv 226 (362)
++|......++. +++.. ...++..=+|.|.+.||++.... ..+.+|+.+ +.|+|.-++++
T Consensus 103 ~~~~f~~~d~~~d~~~~~l~~---~~~~~~FD~V~~~~~lhy~~~~~-~~~~~l~~~~r~LkpGG~~i~ 167 (302)
T 2vdw_A 103 YKFDYIQETIRSDTFVSSVRE---VFYFGKFNIIDWQFAIHYSFHPR-HYATVMNNLSELTASGGKVLI 167 (302)
T ss_dssp CEEEEEECCTTSSSHHHHHHT---TCCSSCEEEEEEESCGGGTCSTT-THHHHHHHHHHHEEEEEEEEE
T ss_pred cccchhhhhcccchhhhhhhc---cccCCCeeEEEECchHHHhCCHH-HHHHHHHHHHHHcCCCCEEEE
Confidence 455443111111 11100 01234444667888899875433 345677655 66899987775
No 49
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=80.51 E-value=13 Score=33.42 Aligned_cols=105 Identities=13% Similarity=0.168 Sum_probs=58.1
Q ss_pred HHHHhhhcCCCeeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccCCCCCCCCCCCchhHHHHHHHHHHHHHHHH
Q 035867 77 GAIMEAFEGESKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTSKPVGGSGAGGLAAVQKVMKEIGNRMEKFA 156 (362)
Q Consensus 77 qaIleA~~g~~~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~~~~~~~~~~~~~~~~~~l~etg~rL~~fA 156 (362)
+.+++.+.-...-.|+|+|.|.|. +...|+. + ..++|||+.+. ..++...+++
T Consensus 47 ~~l~~~l~~~~~~~vLDiGcG~G~----~~~~l~~-~----~~~v~gvD~s~--------------~~~~~a~~~~---- 99 (279)
T 3ccf_A 47 EDLLQLLNPQPGEFILDLGCGTGQ----LTEKIAQ-S----GAEVLGTDNAA--------------TMIEKARQNY---- 99 (279)
T ss_dssp CHHHHHHCCCTTCEEEEETCTTSH----HHHHHHH-T----TCEEEEEESCH--------------HHHHHHHHHC----
T ss_pred HHHHHHhCCCCCCEEEEecCCCCH----HHHHHHh-C----CCeEEEEECCH--------------HHHHHHHhhC----
Confidence 345666655555689999999885 4445554 2 35899998642 2333333222
Q ss_pred HHcCCcEEEEEeeccCCcccCccccccccCCCeEEEeccccccccccccCcHHHHHH-HHHhcCCcEEEEE
Q 035867 157 RLMGVPFEFNVIHHVGDLCDLNLAELDVRSDEALAINCIGALHTIAAVDDRRDVLIS-NLRSLQPRIITVV 226 (362)
Q Consensus 157 ~~~gvpfeF~~v~~~~~~e~l~~~~l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~-~ir~L~P~vvvlv 226 (362)
-++. |.. .+++++.. ++..=+|-|...+|++. + .+.+|+ ..+.|+|.-.+++
T Consensus 100 --~~~~--~~~----~d~~~~~~------~~~fD~v~~~~~l~~~~---d-~~~~l~~~~~~LkpgG~l~~ 152 (279)
T 3ccf_A 100 --PHLH--FDV----ADARNFRV------DKPLDAVFSNAMLHWVK---E-PEAAIASIHQALKSGGRFVA 152 (279)
T ss_dssp --TTSC--EEE----CCTTTCCC------SSCEEEEEEESCGGGCS---C-HHHHHHHHHHHEEEEEEEEE
T ss_pred --CCCE--EEE----CChhhCCc------CCCcCEEEEcchhhhCc---C-HHHHHHHHHHhcCCCcEEEE
Confidence 1333 322 24454422 23222344555678874 3 344555 4577899877665
No 50
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=80.07 E-value=4.6 Score=36.85 Aligned_cols=112 Identities=13% Similarity=0.159 Sum_probs=61.7
Q ss_pred HHHHHhhhcCCCeeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccCCCCCCCCCCCchhHHHHHHHHHHHHHHH
Q 035867 76 NGAIMEAFEGESKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTSKPVGGSGAGGLAAVQKVMKEIGNRMEKF 155 (362)
Q Consensus 76 NqaIleA~~g~~~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~~~~~~~~~~~~~~~~~~l~etg~rL~~f 155 (362)
-..+++.+..... .|+|+|.|.|. +...|+.+ | .++|||+.+. ..++.+.+++
T Consensus 72 ~~~~~~~~~~~~~-~vLDlGcG~G~----~~~~l~~~--~---~~v~gvD~s~--------------~~~~~a~~~~--- 124 (299)
T 3g2m_A 72 AREFATRTGPVSG-PVLELAAGMGR----LTFPFLDL--G---WEVTALELST--------------SVLAAFRKRL--- 124 (299)
T ss_dssp HHHHHHHHCCCCS-CEEEETCTTTT----THHHHHTT--T---CCEEEEESCH--------------HHHHHHHHHH---
T ss_pred HHHHHHhhCCCCC-cEEEEeccCCH----HHHHHHHc--C---CeEEEEECCH--------------HHHHHHHHHH---
Confidence 4455666654444 89999999997 45556655 2 4799998652 2344444433
Q ss_pred HHHcC----CcEEEEEeeccCCcccCccccccccCCCe-EEEeccccccccccccCcHHHHHHHH-HhcCCcEEEEEc
Q 035867 156 ARLMG----VPFEFNVIHHVGDLCDLNLAELDVRSDEA-LAINCIGALHTIAAVDDRRDVLISNL-RSLQPRIITVVE 227 (362)
Q Consensus 156 A~~~g----vpfeF~~v~~~~~~e~l~~~~l~~~~~E~-laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~vvvlvE 227 (362)
...+ -..+|.. .+++++.. ++.. +||.+...+|++. +..+..+|+.+ +.|+|.-.++++
T Consensus 125 -~~~~~~~~~~v~~~~----~d~~~~~~------~~~fD~v~~~~~~~~~~~--~~~~~~~l~~~~~~L~pgG~l~~~ 189 (299)
T 3g2m_A 125 -AEAPADVRDRCTLVQ----GDMSAFAL------DKRFGTVVISSGSINELD--EADRRGLYASVREHLEPGGKFLLS 189 (299)
T ss_dssp -HTSCHHHHTTEEEEE----CBTTBCCC------SCCEEEEEECHHHHTTSC--HHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred -hhcccccccceEEEe----CchhcCCc------CCCcCEEEECCcccccCC--HHHHHHHHHHHHHHcCCCcEEEEE
Confidence 3333 3455533 35554422 2222 2332233356553 12356677655 667998777653
No 51
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=80.03 E-value=8 Score=36.10 Aligned_cols=134 Identities=13% Similarity=0.086 Sum_probs=73.8
Q ss_pred HHHhhhcCCCeeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccCCCCCCCCCCCchhHHHHHHHHHHHHHHHHH
Q 035867 78 AIMEAFEGESKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTSKPVGGSGAGGLAAVQKVMKEIGNRMEKFAR 157 (362)
Q Consensus 78 aIleA~~g~~~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~~~~~~~~~~~~~~~~~~l~etg~rL~~fA~ 157 (362)
.|++.+.. --.|+|+|.|.|. |--.++. .+|..++++++.+. +.++-+. +++.
T Consensus 125 ~i~~~i~~--p~~VLDLGCG~Gp----LAl~~~~---~~p~a~y~a~DId~--------------~~le~a~----~~l~ 177 (281)
T 3lcv_B 125 ELFRHLPR--PNTLRDLACGLNP----LAAPWMG---LPAETVYIASDIDA--------------RLVGFVD----EALT 177 (281)
T ss_dssp HHGGGSCC--CSEEEETTCTTGG----GCCTTTT---CCTTCEEEEEESBH--------------HHHHHHH----HHHH
T ss_pred HHHhccCC--CceeeeeccCccH----HHHHHHh---hCCCCEEEEEeCCH--------------HHHHHHH----HHHH
Confidence 44555533 3478999988763 2222222 24778999998653 3444333 4556
Q ss_pred HcCCcEEEEEeeccCCcccCccccccccCCCeEEEeccccccccccccCcHHHHHHHHHhcCCcEEEEE-cccccccCCC
Q 035867 158 LMGVPFEFNVIHHVGDLCDLNLAELDVRSDEALAINCIGALHTIAAVDDRRDVLISNLRSLQPRIITVV-EEEVDLDVGI 236 (362)
Q Consensus 158 ~~gvpfeF~~v~~~~~~e~l~~~~l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~ir~L~P~vvvlv-E~ea~~~~~~ 236 (362)
.+|+++.|.... -... .+ -.+.+++.+|-. +|+|-+ ..+...++.+..|+|..|++. ++-+ . +|
T Consensus 178 ~~g~~~~~~v~D---~~~~----~p-~~~~DvaL~lkt--i~~Le~--q~kg~g~~ll~aL~~~~vvVSfp~ks-l-~G- 242 (281)
T 3lcv_B 178 RLNVPHRTNVAD---LLED----RL-DEPADVTLLLKT--LPCLET--QQRGSGWEVIDIVNSPNIVVTFPTKS-L-GQ- 242 (281)
T ss_dssp HTTCCEEEEECC---TTTS----CC-CSCCSEEEETTC--HHHHHH--HSTTHHHHHHHHSSCSEEEEEEECC-------
T ss_pred hcCCCceEEEee---eccc----CC-CCCcchHHHHHH--HHHhhh--hhhHHHHHHHHHhCCCCEEEeccchh-h-cC-
Confidence 789998885431 1111 11 223455555544 588742 223355699999999999884 3211 1 11
Q ss_pred CCCchHHHHHHHHHHHHHHHHHhh
Q 035867 237 DGLEFVKGFQECLRWFRVYFESLD 260 (362)
Q Consensus 237 n~~~F~~RF~eaL~~Y~alfdsld 260 (362)
-++.+. ..|+..|+..=
T Consensus 243 rs~gm~-------~~Y~~~~e~~~ 259 (281)
T 3lcv_B 243 RSKGMF-------QNYSQSFESQA 259 (281)
T ss_dssp ---CHH-------HHHHHHHHHHH
T ss_pred CCcchh-------hHHHHHHHHHH
Confidence 234433 56777777643
No 52
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=79.84 E-value=15 Score=31.84 Aligned_cols=99 Identities=12% Similarity=-0.004 Sum_probs=55.2
Q ss_pred eEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHcC--CcEEEE
Q 035867 89 LHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTSKPVGGSGAGGLAAVQKVMKEIGNRMEKFARLMG--VPFEFN 166 (362)
Q Consensus 89 VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~~~~~~~~~~~~~~~~~~l~etg~rL~~fA~~~g--vpfeF~ 166 (362)
-.|+|+|.|.|. +...|+. +..++|||+.+. ..++.+.+++ +..+ -..+|.
T Consensus 68 ~~vLDiGcG~G~----~~~~l~~-----~~~~v~gvD~s~--------------~~~~~a~~~~----~~~~~~~~v~~~ 120 (235)
T 3lcc_A 68 GRALVPGCGGGH----DVVAMAS-----PERFVVGLDISE--------------SALAKANETY----GSSPKAEYFSFV 120 (235)
T ss_dssp EEEEEETCTTCH----HHHHHCB-----TTEEEEEECSCH--------------HHHHHHHHHH----TTSGGGGGEEEE
T ss_pred CCEEEeCCCCCH----HHHHHHh-----CCCeEEEEECCH--------------HHHHHHHHHh----hccCCCcceEEE
Confidence 499999999884 4456654 346899998642 2344443332 2222 234552
Q ss_pred EeeccCCcccCccccccccCCCeEEEeccccccccccccCcHHHHHHHHH-hcCCcEEEEE
Q 035867 167 VIHHVGDLCDLNLAELDVRSDEALAINCIGALHTIAAVDDRRDVLISNLR-SLQPRIITVV 226 (362)
Q Consensus 167 ~v~~~~~~e~l~~~~l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~ir-~L~P~vvvlv 226 (362)
. .++.++.+. +..=+|-|...||++. +..+..+|+.++ .|+|.-.+++
T Consensus 121 ~----~d~~~~~~~------~~fD~v~~~~~l~~~~--~~~~~~~l~~~~~~LkpgG~l~~ 169 (235)
T 3lcc_A 121 K----EDVFTWRPT------ELFDLIFDYVFFCAIE--PEMRPAWAKSMYELLKPDGELIT 169 (235)
T ss_dssp C----CCTTTCCCS------SCEEEEEEESSTTTSC--GGGHHHHHHHHHHHEEEEEEEEE
T ss_pred E----CchhcCCCC------CCeeEEEEChhhhcCC--HHHHHHHHHHHHHHCCCCcEEEE
Confidence 2 355544322 1122333445578874 234566776665 5899877764
No 53
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=79.42 E-value=22 Score=31.03 Aligned_cols=102 Identities=9% Similarity=0.131 Sum_probs=55.8
Q ss_pred CCeeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCcEEE
Q 035867 86 ESKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTSKPVGGSGAGGLAAVQKVMKEIGNRMEKFARLMGVPFEF 165 (362)
Q Consensus 86 ~~~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~~~~~~~~~~~~~~~~~~l~etg~rL~~fA~~~gvpfeF 165 (362)
.+.-+|+|+|.|.|.- ...|+.+ + .++|||+.+. ..++...+++ +...-.++|
T Consensus 38 ~~~~~vLDiG~G~G~~----~~~l~~~-~----~~v~~vD~s~--------------~~~~~a~~~~----~~~~~~~~~ 90 (263)
T 2yqz_A 38 GEEPVFLELGVGTGRI----ALPLIAR-G----YRYIALDADA--------------AMLEVFRQKI----AGVDRKVQV 90 (263)
T ss_dssp SSCCEEEEETCTTSTT----HHHHHTT-T----CEEEEEESCH--------------HHHHHHHHHT----TTSCTTEEE
T ss_pred CCCCEEEEeCCcCCHH----HHHHHHC-C----CEEEEEECCH--------------HHHHHHHHHh----hccCCceEE
Confidence 3456899999999863 3345554 2 3799998642 2343333332 222334555
Q ss_pred EEeeccCCcccCccccccccCCCeEEEeccccccccccccCcHHHHHHH-HHhcCCcEEEEEc
Q 035867 166 NVIHHVGDLCDLNLAELDVRSDEALAINCIGALHTIAAVDDRRDVLISN-LRSLQPRIITVVE 227 (362)
Q Consensus 166 ~~v~~~~~~e~l~~~~l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~-ir~L~P~vvvlvE 227 (362)
.. .+++++. ..++..=+|-|...+|++. + ...+|+. .+-|+|.-.+++.
T Consensus 91 ~~----~d~~~~~-----~~~~~fD~v~~~~~l~~~~---~-~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 91 VQ----ADARAIP-----LPDESVHGVIVVHLWHLVP---D-WPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp EE----SCTTSCC-----SCTTCEEEEEEESCGGGCT---T-HHHHHHHHHHHEEEEEEEEEE
T ss_pred EE----cccccCC-----CCCCCeeEEEECCchhhcC---C-HHHHHHHHHHHCCCCcEEEEE
Confidence 33 2455442 2233222334455678884 3 3455554 5678998777654
No 54
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=79.05 E-value=20 Score=29.16 Aligned_cols=104 Identities=10% Similarity=0.000 Sum_probs=58.1
Q ss_pred HHHHhhhcCCCeeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccCCCCCCCCCCCchhHHHHHHHHHHHHHHHH
Q 035867 77 GAIMEAFEGESKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTSKPVGGSGAGGLAAVQKVMKEIGNRMEKFA 156 (362)
Q Consensus 77 qaIleA~~g~~~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~~~~~~~~~~~~~~~~~~l~etg~rL~~fA 156 (362)
..|++.+.-.+.-+|+|+|.|.|. +...|+. +..++|||+.+. ..++.+.++ +
T Consensus 25 ~~~~~~~~~~~~~~vLdiG~G~G~----~~~~l~~-----~~~~v~~vD~~~--------------~~~~~a~~~----~ 77 (183)
T 2yxd_A 25 AVSIGKLNLNKDDVVVDVGCGSGG----MTVEIAK-----RCKFVYAIDYLD--------------GAIEVTKQN----L 77 (183)
T ss_dssp HHHHHHHCCCTTCEEEEESCCCSH----HHHHHHT-----TSSEEEEEECSH--------------HHHHHHHHH----H
T ss_pred HHHHHHcCCCCCCEEEEeCCCCCH----HHHHHHh-----cCCeEEEEeCCH--------------HHHHHHHHH----H
Confidence 345555554455689999999886 4455555 346899998642 234333333 3
Q ss_pred HHcCC-cEEEEEeeccCCcccCccccccccCCCeEEEeccccccccccccCcHHHHHHHHHhcCCcEEEEE
Q 035867 157 RLMGV-PFEFNVIHHVGDLCDLNLAELDVRSDEALAINCIGALHTIAAVDDRRDVLISNLRSLQPRIITVV 226 (362)
Q Consensus 157 ~~~gv-pfeF~~v~~~~~~e~l~~~~l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~ir~L~P~vvvlv 226 (362)
+..|+ ..+|.. .++.+. ... ..=+.++.|.. ...+.+|+.++++ |.-.+++
T Consensus 78 ~~~~~~~~~~~~----~d~~~~-~~~---~~~D~i~~~~~----------~~~~~~l~~~~~~-~gG~l~~ 129 (183)
T 2yxd_A 78 AKFNIKNCQIIK----GRAEDV-LDK---LEFNKAFIGGT----------KNIEKIIEILDKK-KINHIVA 129 (183)
T ss_dssp HHTTCCSEEEEE----SCHHHH-GGG---CCCSEEEECSC----------SCHHHHHHHHHHT-TCCEEEE
T ss_pred HHcCCCcEEEEE----CCcccc-ccC---CCCcEEEECCc----------ccHHHHHHHHhhC-CCCEEEE
Confidence 44565 345522 244331 111 12245544444 2356789999888 8766554
No 55
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=78.96 E-value=7.6 Score=33.23 Aligned_cols=42 Identities=14% Similarity=0.089 Sum_probs=30.3
Q ss_pred HHHHhhhcCCCeeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccC
Q 035867 77 GAIMEAFEGESKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTS 127 (362)
Q Consensus 77 qaIleA~~g~~~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~ 127 (362)
..+++.+...+.-.|+|+|.|.|. +...|+.+ + .++|||+.+
T Consensus 35 ~~~l~~~~~~~~~~vLDiGcG~G~----~~~~l~~~--~---~~v~~vD~s 76 (220)
T 3hnr_A 35 EDILEDVVNKSFGNVLEFGVGTGN----LTNKLLLA--G---RTVYGIEPS 76 (220)
T ss_dssp HHHHHHHHHTCCSEEEEECCTTSH----HHHHHHHT--T---CEEEEECSC
T ss_pred HHHHHHhhccCCCeEEEeCCCCCH----HHHHHHhC--C---CeEEEEeCC
Confidence 456666665566789999999884 56666666 2 489999864
No 56
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=78.82 E-value=15 Score=31.71 Aligned_cols=109 Identities=20% Similarity=0.214 Sum_probs=58.5
Q ss_pred HHhhhcCCCeeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHH
Q 035867 79 IMEAFEGESKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTSKPVGGSGAGGLAAVQKVMKEIGNRMEKFARL 158 (362)
Q Consensus 79 IleA~~g~~~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~~~~~~~~~~~~~~~~~~l~etg~rL~~fA~~ 158 (362)
|++.+... -.|+|+|.|.|. +...|+.+ .++|||+.+. ..++.+.+++ +.
T Consensus 27 ~~~~~~~~--~~vLdiG~G~G~----~~~~l~~~------~~v~~vD~s~--------------~~~~~a~~~~----~~ 76 (243)
T 3d2l_A 27 VLEQVEPG--KRIADIGCGTGT----ATLLLADH------YEVTGVDLSE--------------EMLEIAQEKA----ME 76 (243)
T ss_dssp HHHHSCTT--CEEEEESCTTCH----HHHHHTTT------SEEEEEESCH--------------HHHHHHHHHH----HH
T ss_pred HHHHcCCC--CeEEEecCCCCH----HHHHHhhC------CeEEEEECCH--------------HHHHHHHHhh----hh
Confidence 44445432 479999999885 55566655 4899998642 2344333332 33
Q ss_pred cCCcEEEEEeeccCCcccCccccccccCCCeEEEeccccccccccccCcHHHHHHHH-HhcCCcEEEEEc
Q 035867 159 MGVPFEFNVIHHVGDLCDLNLAELDVRSDEALAINCIGALHTIAAVDDRRDVLISNL-RSLQPRIITVVE 227 (362)
Q Consensus 159 ~gvpfeF~~v~~~~~~e~l~~~~l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~vvvlvE 227 (362)
.+...+|.. .++.++.. . ..=+.|+.++ -.+||+.... ....+|+.+ +.|+|.-.++++
T Consensus 77 ~~~~~~~~~----~d~~~~~~---~-~~fD~v~~~~-~~~~~~~~~~-~~~~~l~~~~~~L~pgG~l~~~ 136 (243)
T 3d2l_A 77 TNRHVDFWV----QDMRELEL---P-EPVDAITILC-DSLNYLQTEA-DVKQTFDSAARLLTDGGKLLFD 136 (243)
T ss_dssp TTCCCEEEE----CCGGGCCC---S-SCEEEEEECT-TGGGGCCSHH-HHHHHHHHHHHHEEEEEEEEEE
T ss_pred cCCceEEEE----cChhhcCC---C-CCcCEEEEeC-CchhhcCCHH-HHHHHHHHHHHhcCCCeEEEEE
Confidence 455555533 24444321 1 1112333222 2577874322 344556554 668999887763
No 57
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=78.56 E-value=13 Score=32.97 Aligned_cols=98 Identities=18% Similarity=0.222 Sum_probs=56.1
Q ss_pred eeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCcEEEEE
Q 035867 88 KLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTSKPVGGSGAGGLAAVQKVMKEIGNRMEKFARLMGVPFEFNV 167 (362)
Q Consensus 88 ~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~~~~~~~~~~~~~~~~~~l~etg~rL~~fA~~~gvpfeF~~ 167 (362)
.-.|+|+|.|.|. +...|+.+ + .++|||+.+. ..++.+.+++ -..+|..
T Consensus 51 ~~~vLDiGcG~G~----~~~~l~~~--~---~~v~gvD~s~--------------~~~~~a~~~~--------~~~~~~~ 99 (263)
T 3pfg_A 51 AASLLDVACGTGM----HLRHLADS--F---GTVEGLELSA--------------DMLAIARRRN--------PDAVLHH 99 (263)
T ss_dssp CCEEEEETCTTSH----HHHHHTTT--S---SEEEEEESCH--------------HHHHHHHHHC--------TTSEEEE
T ss_pred CCcEEEeCCcCCH----HHHHHHHc--C---CeEEEEECCH--------------HHHHHHHhhC--------CCCEEEE
Confidence 3579999999884 66677766 2 2799998642 2343333321 1334422
Q ss_pred eeccCCcccCccccccccCCCeEEEeccc-cccccccccCcHHHHHHHH-HhcCCcEEEEEc
Q 035867 168 IHHVGDLCDLNLAELDVRSDEALAINCIG-ALHTIAAVDDRRDVLISNL-RSLQPRIITVVE 227 (362)
Q Consensus 168 v~~~~~~e~l~~~~l~~~~~E~laVN~~~-~Lh~l~~~~~~~~~~L~~i-r~L~P~vvvlvE 227 (362)
.++.++.. ++..=+|-|.. .|||+... .....+|+.+ +.|+|.-+++++
T Consensus 100 ----~d~~~~~~------~~~fD~v~~~~~~l~~~~~~-~~~~~~l~~~~~~L~pgG~l~i~ 150 (263)
T 3pfg_A 100 ----GDMRDFSL------GRRFSAVTCMFSSIGHLAGQ-AELDAALERFAAHVLPDGVVVVE 150 (263)
T ss_dssp ----CCTTTCCC------SCCEEEEEECTTGGGGSCHH-HHHHHHHHHHHHTEEEEEEEEEC
T ss_pred ----CChHHCCc------cCCcCEEEEcCchhhhcCCH-HHHHHHHHHHHHhcCCCcEEEEE
Confidence 34554422 23333344554 68888532 2344566554 667999888875
No 58
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=78.28 E-value=14 Score=34.68 Aligned_cols=113 Identities=21% Similarity=0.217 Sum_probs=63.5
Q ss_pred HHHHhhhcCCCeeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccCCCCCCCCCCCchhHHHHHHHHHHHHHHHH
Q 035867 77 GAIMEAFEGESKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTSKPVGGSGAGGLAAVQKVMKEIGNRMEKFA 156 (362)
Q Consensus 77 qaIleA~~g~~~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~~~~~~~~~~~~~~~~~~l~etg~rL~~fA 156 (362)
..|++.+.-.+..+|+|+|.|.| .+...|+.+. |.+++|+++. . ..++.+.+++
T Consensus 172 ~~~~~~~~~~~~~~vlDvG~G~G----~~~~~l~~~~---~~~~~~~~D~-~--------------~~~~~a~~~~---- 225 (374)
T 1qzz_A 172 EAPADAYDWSAVRHVLDVGGGNG----GMLAAIALRA---PHLRGTLVEL-A--------------GPAERARRRF---- 225 (374)
T ss_dssp HHHHHTSCCTTCCEEEEETCTTS----HHHHHHHHHC---TTCEEEEEEC-H--------------HHHHHHHHHH----
T ss_pred HHHHHhCCCCCCCEEEEECCCcC----HHHHHHHHHC---CCCEEEEEeC-H--------------HHHHHHHHHH----
Confidence 45677665456679999999999 4555565543 5689999985 2 2344444333
Q ss_pred HHcCCc--EEEEEeeccCCcccCccccccccCCCeEEEeccccccccccccCcHHHHHHHH-HhcCCcEEE-EEcc
Q 035867 157 RLMGVP--FEFNVIHHVGDLCDLNLAELDVRSDEALAINCIGALHTIAAVDDRRDVLISNL-RSLQPRIIT-VVEE 228 (362)
Q Consensus 157 ~~~gvp--feF~~v~~~~~~e~l~~~~l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~vvv-lvE~ 228 (362)
+..|++ .+|..- ++.+- + +...=+|-|...||++.+ .....+|+.+ +.|+|.-.+ ++|.
T Consensus 226 ~~~~~~~~v~~~~~----d~~~~----~---~~~~D~v~~~~vl~~~~~--~~~~~~l~~~~~~L~pgG~l~i~e~ 288 (374)
T 1qzz_A 226 ADAGLADRVTVAEG----DFFKP----L---PVTADVVLLSFVLLNWSD--EDALTILRGCVRALEPGGRLLVLDR 288 (374)
T ss_dssp HHTTCTTTEEEEEC----CTTSC----C---SCCEEEEEEESCGGGSCH--HHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred HhcCCCCceEEEeC----CCCCc----C---CCCCCEEEEeccccCCCH--HHHHHHHHHHHHhcCCCcEEEEEec
Confidence 344553 666432 33221 1 111223444555788742 1223566655 667998744 4564
No 59
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=77.98 E-value=18 Score=30.55 Aligned_cols=108 Identities=17% Similarity=0.160 Sum_probs=60.5
Q ss_pred HHHHHhhhcC-CCeeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccCCCCCCCCCCCchhHHHHHHHHHHHHHH
Q 035867 76 NGAIMEAFEG-ESKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTSKPVGGSGAGGLAAVQKVMKEIGNRMEK 154 (362)
Q Consensus 76 NqaIleA~~g-~~~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~~~~~~~~~~~~~~~~~~l~etg~rL~~ 154 (362)
...+++.+.. ...-+|+|+|.|.|. +...|+.+ + .++|||+.+. ..+ +
T Consensus 34 ~~~~~~~l~~~~~~~~vLdiG~G~G~----~~~~l~~~--~---~~v~~~D~s~--------------~~~--------~ 82 (218)
T 3ou2_A 34 APAALERLRAGNIRGDVLELASGTGY----WTRHLSGL--A---DRVTALDGSA--------------EMI--------A 82 (218)
T ss_dssp HHHHHHHHTTTTSCSEEEEESCTTSH----HHHHHHHH--S---SEEEEEESCH--------------HHH--------H
T ss_pred HHHHHHHHhcCCCCCeEEEECCCCCH----HHHHHHhc--C---CeEEEEeCCH--------------HHH--------H
Confidence 4456676652 333499999999885 45555555 2 3899998642 122 2
Q ss_pred HHHHcC-CcEEEEEeeccCCcccCccccccccCCCeEEEeccccccccccccCcHHHHHHHH-HhcCCcEEEEE
Q 035867 155 FARLMG-VPFEFNVIHHVGDLCDLNLAELDVRSDEALAINCIGALHTIAAVDDRRDVLISNL-RSLQPRIITVV 226 (362)
Q Consensus 155 fA~~~g-vpfeF~~v~~~~~~e~l~~~~l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~vvvlv 226 (362)
.|+..| -..+|.. .++.++ ..++..=+|-|...|||+.. ..+..+|+.+ +.|+|.-.+++
T Consensus 83 ~a~~~~~~~~~~~~----~d~~~~------~~~~~~D~v~~~~~l~~~~~--~~~~~~l~~~~~~L~pgG~l~~ 144 (218)
T 3ou2_A 83 EAGRHGLDNVEFRQ----QDLFDW------TPDRQWDAVFFAHWLAHVPD--DRFEAFWESVRSAVAPGGVVEF 144 (218)
T ss_dssp HHGGGCCTTEEEEE----CCTTSC------CCSSCEEEEEEESCGGGSCH--HHHHHHHHHHHHHEEEEEEEEE
T ss_pred HHHhcCCCCeEEEe----cccccC------CCCCceeEEEEechhhcCCH--HHHHHHHHHHHHHcCCCeEEEE
Confidence 333345 3455533 244443 12233334445567888852 2245666654 67799766654
No 60
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=77.97 E-value=15 Score=30.79 Aligned_cols=109 Identities=13% Similarity=0.124 Sum_probs=59.1
Q ss_pred CeeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHcCC-cEEE
Q 035867 87 SKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTSKPVGGSGAGGLAAVQKVMKEIGNRMEKFARLMGV-PFEF 165 (362)
Q Consensus 87 ~~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~~~~~~~~~~~~~~~~~~l~etg~rL~~fA~~~gv-pfeF 165 (362)
+.-.|+|+|.|.|. +...++.++ .-++|||+.+. ..++.+.++ ++..|+ ..+|
T Consensus 44 ~~~~vLDlgcG~G~----~~~~~~~~~----~~~v~~vD~~~--------------~~~~~a~~~----~~~~~~~~v~~ 97 (189)
T 3p9n_A 44 TGLAVLDLYAGSGA----LGLEALSRG----AASVLFVESDQ--------------RSAAVIARN----IEALGLSGATL 97 (189)
T ss_dssp TTCEEEEETCTTCH----HHHHHHHTT----CSEEEEEECCH--------------HHHHHHHHH----HHHHTCSCEEE
T ss_pred CCCEEEEeCCCcCH----HHHHHHHCC----CCeEEEEECCH--------------HHHHHHHHH----HHHcCCCceEE
Confidence 33479999999885 222234442 24799998653 234433333 344465 3444
Q ss_pred EEeeccCCcccCccccccccCCCeEEEeccccccccccccCcHHHHHHHHHh---cCCcEEEEEccccc
Q 035867 166 NVIHHVGDLCDLNLAELDVRSDEALAINCIGALHTIAAVDDRRDVLISNLRS---LQPRIITVVEEEVD 231 (362)
Q Consensus 166 ~~v~~~~~~e~l~~~~l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~ir~---L~P~vvvlvE~ea~ 231 (362)
.. .++.++... +.-..=+.++.|..+ |+.. ...+.++..+.+ |+|.-++++|.+..
T Consensus 98 ~~----~d~~~~~~~-~~~~~fD~i~~~~p~--~~~~---~~~~~~l~~~~~~~~L~pgG~l~~~~~~~ 156 (189)
T 3p9n_A 98 RR----GAVAAVVAA-GTTSPVDLVLADPPY--NVDS---ADVDAILAALGTNGWTREGTVAVVERATT 156 (189)
T ss_dssp EE----SCHHHHHHH-CCSSCCSEEEECCCT--TSCH---HHHHHHHHHHHHSSSCCTTCEEEEEEETT
T ss_pred EE----ccHHHHHhh-ccCCCccEEEECCCC--Ccch---hhHHHHHHHHHhcCccCCCeEEEEEecCC
Confidence 22 344433211 111222467777664 3321 235567777765 89999998876543
No 61
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=77.72 E-value=7.1 Score=33.02 Aligned_cols=97 Identities=9% Similarity=0.039 Sum_probs=54.9
Q ss_pred eeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCcEEEEE
Q 035867 88 KLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTSKPVGGSGAGGLAAVQKVMKEIGNRMEKFARLMGVPFEFNV 167 (362)
Q Consensus 88 ~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~~~~~~~~~~~~~~~~~~l~etg~rL~~fA~~~gvpfeF~~ 167 (362)
.-.|+|+|.|.|. +...|+.+ + .++|||+.+. ..++.+.++ .-..+|
T Consensus 42 ~~~vLDiGcG~G~----~~~~l~~~--~---~~v~gvD~s~--------------~~~~~a~~~--------~~~~~~-- 88 (203)
T 3h2b_A 42 DGVILDVGSGTGR----WTGHLASL--G---HQIEGLEPAT--------------RLVELARQT--------HPSVTF-- 88 (203)
T ss_dssp CSCEEEETCTTCH----HHHHHHHT--T---CCEEEECCCH--------------HHHHHHHHH--------CTTSEE--
T ss_pred CCeEEEecCCCCH----HHHHHHhc--C---CeEEEEeCCH--------------HHHHHHHHh--------CCCCeE--
Confidence 4579999999885 56667766 2 2799998642 233332222 223344
Q ss_pred eeccCCcccCccccccccCCCeEEEeccccccccccccCcHHHHHHH-HHhcCCcEEEEE
Q 035867 168 IHHVGDLCDLNLAELDVRSDEALAINCIGALHTIAAVDDRRDVLISN-LRSLQPRIITVV 226 (362)
Q Consensus 168 v~~~~~~e~l~~~~l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~-ir~L~P~vvvlv 226 (362)
+ ..+++++. ..++..=+|-|...|||+. ......+|+. .+.|+|.-.+++
T Consensus 89 ~--~~d~~~~~-----~~~~~fD~v~~~~~l~~~~--~~~~~~~l~~~~~~L~pgG~l~i 139 (203)
T 3h2b_A 89 H--HGTITDLS-----DSPKRWAGLLAWYSLIHMG--PGELPDALVALRMAVEDGGGLLM 139 (203)
T ss_dssp E--CCCGGGGG-----GSCCCEEEEEEESSSTTCC--TTTHHHHHHHHHHTEEEEEEEEE
T ss_pred E--eCcccccc-----cCCCCeEEEEehhhHhcCC--HHHHHHHHHHHHHHcCCCcEEEE
Confidence 2 13444432 2234333444556778885 2335556655 466799877665
No 62
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=77.21 E-value=29 Score=29.80 Aligned_cols=109 Identities=17% Similarity=0.126 Sum_probs=58.6
Q ss_pred HHHHhhhcCCCeeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccCCCCCCCCCCCchhHHHHHHHHHHHHHHHH
Q 035867 77 GAIMEAFEGESKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTSKPVGGSGAGGLAAVQKVMKEIGNRMEKFA 156 (362)
Q Consensus 77 qaIleA~~g~~~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~~~~~~~~~~~~~~~~~~l~etg~rL~~fA 156 (362)
..|.+.+.....-+|+|+|.|.|. +...|+.+ +. -++|||+.+. ..++.+.+++.
T Consensus 33 ~~l~~~~~~~~~~~vLdiG~G~G~----~~~~l~~~--~~--~~v~~vD~s~--------------~~~~~a~~~~~--- 87 (243)
T 3bkw_A 33 PALRAMLPEVGGLRIVDLGCGFGW----FCRWAHEH--GA--SYVLGLDLSE--------------KMLARARAAGP--- 87 (243)
T ss_dssp HHHHHHSCCCTTCEEEEETCTTCH----HHHHHHHT--TC--SEEEEEESCH--------------HHHHHHHHTSC---
T ss_pred HHHHHhccccCCCEEEEEcCcCCH----HHHHHHHC--CC--CeEEEEcCCH--------------HHHHHHHHhcc---
Confidence 456666665556689999999885 45566665 21 2899998642 22333222211
Q ss_pred HHcCCcEEEEEeeccCCcccCccccccccCCCeEEEeccccccccccccCcHHHHHHH-HHhcCCcEEEEE
Q 035867 157 RLMGVPFEFNVIHHVGDLCDLNLAELDVRSDEALAINCIGALHTIAAVDDRRDVLISN-LRSLQPRIITVV 226 (362)
Q Consensus 157 ~~~gvpfeF~~v~~~~~~e~l~~~~l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~-ir~L~P~vvvlv 226 (362)
.-.++|.. .++.++. ..++..=+|-|...+||+. + ...+|+. .+.|+|.-.+++
T Consensus 88 ---~~~~~~~~----~d~~~~~-----~~~~~fD~v~~~~~l~~~~---~-~~~~l~~~~~~L~pgG~l~~ 142 (243)
T 3bkw_A 88 ---DTGITYER----ADLDKLH-----LPQDSFDLAYSSLALHYVE---D-VARLFRTVHQALSPGGHFVF 142 (243)
T ss_dssp ---SSSEEEEE----CCGGGCC-----CCTTCEEEEEEESCGGGCS---C-HHHHHHHHHHHEEEEEEEEE
T ss_pred ---cCCceEEE----cChhhcc-----CCCCCceEEEEeccccccc---h-HHHHHHHHHHhcCcCcEEEE
Confidence 01344432 2444432 2223222333445678874 3 4455655 466799876654
No 63
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=77.12 E-value=12 Score=34.46 Aligned_cols=99 Identities=15% Similarity=0.107 Sum_probs=60.3
Q ss_pred eeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCcEEEEE
Q 035867 88 KLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTSKPVGGSGAGGLAAVQKVMKEIGNRMEKFARLMGVPFEFNV 167 (362)
Q Consensus 88 ~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~~~~~~~~~~~~~~~~~~l~etg~rL~~fA~~~gvpfeF~~ 167 (362)
--.|+|+|.|.|. |--.+. |..+++|++-+. ..+ +.+.+++...|+++.|..
T Consensus 106 p~~VLDlGCG~gp----Lal~~~------~~~~y~a~DId~--------------~~i----~~ar~~~~~~g~~~~~~v 157 (253)
T 3frh_A 106 PRRVLDIACGLNP----LALYER------GIASVWGCDIHQ--------------GLG----DVITPFAREKDWDFTFAL 157 (253)
T ss_dssp CSEEEEETCTTTH----HHHHHT------TCSEEEEEESBH--------------HHH----HHHHHHHHHTTCEEEEEE
T ss_pred CCeEEEecCCccH----HHHHhc------cCCeEEEEeCCH--------------HHH----HHHHHHHHhcCCCceEEE
Confidence 4489999998762 222222 667899998653 223 334455677899998865
Q ss_pred eeccCCcccCccccccccCCCeEEEeccccccccccccCcHHHHHHHHHhcCCcEEEEE
Q 035867 168 IHHVGDLCDLNLAELDVRSDEALAINCIGALHTIAAVDDRRDVLISNLRSLQPRIITVV 226 (362)
Q Consensus 168 v~~~~~~e~l~~~~l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~ir~L~P~vvvlv 226 (362)
. +.....+ -.+.+++.++-. +|+|-. ..+...++.+..|+|..|++.
T Consensus 158 ~----D~~~~~~----~~~~DvvLllk~--lh~LE~--q~~~~~~~ll~aL~~~~vvVs 204 (253)
T 3frh_A 158 Q----DVLCAPP----AEAGDLALIFKL--LPLLER--EQAGSAMALLQSLNTPRMAVS 204 (253)
T ss_dssp C----CTTTSCC----CCBCSEEEEESC--HHHHHH--HSTTHHHHHHHHCBCSEEEEE
T ss_pred e----ecccCCC----CCCcchHHHHHH--HHHhhh--hchhhHHHHHHHhcCCCEEEE
Confidence 4 2222111 124556655554 577743 233456688899999888874
No 64
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=76.91 E-value=12 Score=35.03 Aligned_cols=43 Identities=12% Similarity=0.024 Sum_probs=31.4
Q ss_pred HHHHhhhcCCCeeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEecc
Q 035867 77 GAIMEAFEGESKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVT 126 (362)
Q Consensus 77 qaIleA~~g~~~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~ 126 (362)
..|++.+.-.+.-+|+|+|.|.|. +...|+.+- |.+++|+++.
T Consensus 174 ~~~~~~~~~~~~~~vLDvG~G~G~----~~~~l~~~~---p~~~~~~~D~ 216 (348)
T 3lst_A 174 LILARAGDFPATGTVADVGGGRGG----FLLTVLREH---PGLQGVLLDR 216 (348)
T ss_dssp HHHHHHSCCCSSEEEEEETCTTSH----HHHHHHHHC---TTEEEEEEEC
T ss_pred HHHHHhCCccCCceEEEECCccCH----HHHHHHHHC---CCCEEEEecC
Confidence 467777765667899999999985 445555542 5688999885
No 65
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=76.63 E-value=9.9 Score=36.16 Aligned_cols=43 Identities=16% Similarity=0.237 Sum_probs=30.0
Q ss_pred HHHHhhhc-CCCeeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEecc
Q 035867 77 GAIMEAFE-GESKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVT 126 (362)
Q Consensus 77 qaIleA~~-g~~~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~ 126 (362)
..|++.+. -...-+|+|+|.|.|. +...|+.+- |.+++|+++.
T Consensus 192 ~~~~~~~~~~~~~~~vlDvG~G~G~----~~~~l~~~~---p~~~~~~~D~ 235 (368)
T 3reo_A 192 KKILEMYNGFEGLTTIVDVGGGTGA----VASMIVAKY---PSINAINFDL 235 (368)
T ss_dssp HHHHTTCCTTTTCSEEEEETCTTSH----HHHHHHHHC---TTCEEEEEEC
T ss_pred HHHHHhcccccCCCEEEEeCCCcCH----HHHHHHHhC---CCCEEEEEeh
Confidence 34666665 3446799999999985 555555543 6688999985
No 66
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=76.32 E-value=12 Score=32.06 Aligned_cols=102 Identities=19% Similarity=0.215 Sum_probs=55.6
Q ss_pred eeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHcCC------
Q 035867 88 KLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTSKPVGGSGAGGLAAVQKVMKEIGNRMEKFARLMGV------ 161 (362)
Q Consensus 88 ~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~~~~~~~~~~~~~~~~~~l~etg~rL~~fA~~~gv------ 161 (362)
.-.|+|+|.|.|. +...|+.+ + .++|||+.+. ..++.+. +.++..++
T Consensus 31 ~~~vLdiG~G~G~----~~~~l~~~--~---~~v~~vD~s~--------------~~~~~a~----~~~~~~~~~~~~~~ 83 (235)
T 3sm3_A 31 DDEILDIGCGSGK----ISLELASK--G---YSVTGIDINS--------------EAIRLAE----TAARSPGLNQKTGG 83 (235)
T ss_dssp TCEEEEETCTTSH----HHHHHHHT--T---CEEEEEESCH--------------HHHHHHH----HHTTCCSCCSSSSC
T ss_pred CCeEEEECCCCCH----HHHHHHhC--C---CeEEEEECCH--------------HHHHHHH----HHHHhcCCccccCc
Confidence 3479999999884 55566665 2 4899998642 2233222 23344555
Q ss_pred cEEEEEeeccCCcccCccccccccCCCeEEEeccccccccccccCcHHHHHHHH-HhcCCcEEEEE
Q 035867 162 PFEFNVIHHVGDLCDLNLAELDVRSDEALAINCIGALHTIAAVDDRRDVLISNL-RSLQPRIITVV 226 (362)
Q Consensus 162 pfeF~~v~~~~~~e~l~~~~l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~vvvlv 226 (362)
..+|.. .++.++. ..++..=+|-|...+||+.+. ..+..+|+.+ +.|+|.-.+++
T Consensus 84 ~~~~~~----~d~~~~~-----~~~~~~D~v~~~~~l~~~~~~-~~~~~~l~~~~~~L~pgG~l~~ 139 (235)
T 3sm3_A 84 KAEFKV----ENASSLS-----FHDSSFDFAVMQAFLTSVPDP-KERSRIIKEVFRVLKPGAYLYL 139 (235)
T ss_dssp EEEEEE----CCTTSCC-----SCTTCEEEEEEESCGGGCCCH-HHHHHHHHHHHHHEEEEEEEEE
T ss_pred ceEEEE----ecccccC-----CCCCceeEEEEcchhhcCCCH-HHHHHHHHHHHHHcCCCeEEEE
Confidence 344432 2444432 223323334445567888531 2233566655 66799876654
No 67
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=75.74 E-value=9.4 Score=34.36 Aligned_cols=121 Identities=12% Similarity=0.137 Sum_probs=62.6
Q ss_pred HHHHhhhcCCCeeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccCCCCCCCCCCCchhHHHHHHHHHHHHHHHH
Q 035867 77 GAIMEAFEGESKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTSKPVGGSGAGGLAAVQKVMKEIGNRMEKFA 156 (362)
Q Consensus 77 qaIleA~~g~~~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~~~~~~~~~~~~~~~~~~l~etg~rL~~fA 156 (362)
+.|++.+.....-+|+|+|.|.|. +...|+.+ |. ++|||+.+. ..++.+.+++.+..
T Consensus 47 ~~l~~~l~~~~~~~vLDiGcG~G~----~~~~l~~~--~~---~v~gvD~s~--------------~~l~~a~~~~~~~~ 103 (293)
T 3thr_A 47 AWLLGLLRQHGCHRVLDVACGTGV----DSIMLVEE--GF---SVTSVDASD--------------KMLKYALKERWNRR 103 (293)
T ss_dssp HHHHHHHHHTTCCEEEETTCTTSH----HHHHHHHT--TC---EEEEEESCH--------------HHHHHHHHHHHHTT
T ss_pred HHHHHHhcccCCCEEEEecCCCCH----HHHHHHHC--CC---eEEEEECCH--------------HHHHHHHHhhhhcc
Confidence 444555544456789999999985 44555655 22 899998653 23444444332111
Q ss_pred HHcC-CcEEEEEeeccCCcccCccccccccCCCeEEEecc-ccccccccc---cCcHHHHHHHH-HhcCCcEEEEE
Q 035867 157 RLMG-VPFEFNVIHHVGDLCDLNLAELDVRSDEALAINCI-GALHTIAAV---DDRRDVLISNL-RSLQPRIITVV 226 (362)
Q Consensus 157 ~~~g-vpfeF~~v~~~~~~e~l~~~~l~~~~~E~laVN~~-~~Lh~l~~~---~~~~~~~L~~i-r~L~P~vvvlv 226 (362)
...+ ..++|.. .++.++.. ++ ..++..=+|-|. ..+||+... ......+|+.+ +.|+|.-.+++
T Consensus 104 ~~~~~~~~~~~~----~d~~~~~~-~~-~~~~~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~ 173 (293)
T 3thr_A 104 KEPAFDKWVIEE----ANWLTLDK-DV-PAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVI 173 (293)
T ss_dssp TSHHHHTCEEEE----CCGGGHHH-HS-CCTTCEEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEE
T ss_pred cccccceeeEee----cChhhCcc-cc-ccCCCeEEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEE
Confidence 1001 1233322 23333321 11 223333344454 568888641 12355666655 66899877765
No 68
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=74.43 E-value=17 Score=31.21 Aligned_cols=105 Identities=13% Similarity=0.102 Sum_probs=56.8
Q ss_pred HHHhhhcC-CCeeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccCCCCCCCCCCCchhHHHHHHHHHHHHHHHH
Q 035867 78 AIMEAFEG-ESKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTSKPVGGSGAGGLAAVQKVMKEIGNRMEKFA 156 (362)
Q Consensus 78 aIleA~~g-~~~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~~~~~~~~~~~~~~~~~~l~etg~rL~~fA 156 (362)
.+++.+.. .+.-+|+|+|.|.|. +...|+.+ ++ ++|||+.+. ..++...+++.
T Consensus 32 ~~~~~l~~~~~~~~vLDiGcG~G~----~~~~l~~~--~~---~v~gvD~s~--------------~~~~~a~~~~~--- 85 (250)
T 2p7i_A 32 FMVRAFTPFFRPGNLLELGSFKGD----FTSRLQEH--FN---DITCVEASE--------------EAISHAQGRLK--- 85 (250)
T ss_dssp HHHHHHGGGCCSSCEEEESCTTSH----HHHHHTTT--CS---CEEEEESCH--------------HHHHHHHHHSC---
T ss_pred HHHHHHHhhcCCCcEEEECCCCCH----HHHHHHHh--CC---cEEEEeCCH--------------HHHHHHHHhhh---
Confidence 34444431 223369999999884 56667664 33 699998642 23333322211
Q ss_pred HHcCCcEEEEEeeccCCcccCccccccccCCCeEEEeccccccccccccCcHHHHHHHHH--hcCCcEEEEE
Q 035867 157 RLMGVPFEFNVIHHVGDLCDLNLAELDVRSDEALAINCIGALHTIAAVDDRRDVLISNLR--SLQPRIITVV 226 (362)
Q Consensus 157 ~~~gvpfeF~~v~~~~~~e~l~~~~l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~ir--~L~P~vvvlv 226 (362)
-..+|.. .+++++. .++..=+|-|...|||+. + .+.+|+.++ -|+|.-.+++
T Consensus 86 ----~~v~~~~----~d~~~~~------~~~~fD~v~~~~~l~~~~---~-~~~~l~~~~~~~LkpgG~l~i 139 (250)
T 2p7i_A 86 ----DGITYIH----SRFEDAQ------LPRRYDNIVLTHVLEHID---D-PVALLKRINDDWLAEGGRLFL 139 (250)
T ss_dssp ----SCEEEEE----SCGGGCC------CSSCEEEEEEESCGGGCS---S-HHHHHHHHHHTTEEEEEEEEE
T ss_pred ----CCeEEEE----ccHHHcC------cCCcccEEEEhhHHHhhc---C-HHHHHHHHHHHhcCCCCEEEE
Confidence 1344432 3455441 123233344555689884 3 356777665 6799766654
No 69
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=74.11 E-value=20 Score=33.50 Aligned_cols=33 Identities=18% Similarity=0.177 Sum_probs=24.4
Q ss_pred CeeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEecc
Q 035867 87 SKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVT 126 (362)
Q Consensus 87 ~~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~ 126 (362)
+.-+|+|+|.|.|. +...|+.+- |.+++|+++.
T Consensus 188 ~~~~vlDvG~G~G~----~~~~l~~~~---p~~~~~~~D~ 220 (352)
T 1fp2_A 188 GLESIVDVGGGTGT----TAKIICETF---PKLKCIVFDR 220 (352)
T ss_dssp TCSEEEEETCTTSH----HHHHHHHHC---TTCEEEEEEC
T ss_pred cCceEEEeCCCccH----HHHHHHHHC---CCCeEEEeeC
Confidence 34689999999984 556666543 4578999985
No 70
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=73.29 E-value=19 Score=30.39 Aligned_cols=44 Identities=27% Similarity=0.279 Sum_probs=33.3
Q ss_pred HHHHHHhhhcCCCeeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccC
Q 035867 75 CNGAIMEAFEGESKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTS 127 (362)
Q Consensus 75 aNqaIleA~~g~~~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~ 127 (362)
..+.|++.+.....-+|+|+|.|.| .+...|+.+ + .++|||+.+
T Consensus 40 ~~~~~~~~~~~~~~~~vLdiG~G~G----~~~~~l~~~--~---~~v~~vD~s 83 (227)
T 3e8s_A 40 TDQAILLAILGRQPERVLDLGCGEG----WLLRALADR--G---IEAVGVDGD 83 (227)
T ss_dssp HHHHHHHHHHHTCCSEEEEETCTTC----HHHHHHHTT--T---CEEEEEESC
T ss_pred ccHHHHHHhhcCCCCEEEEeCCCCC----HHHHHHHHC--C---CEEEEEcCC
Confidence 4567888887666689999999998 466777766 2 379999864
No 71
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=73.27 E-value=13 Score=32.45 Aligned_cols=106 Identities=14% Similarity=0.134 Sum_probs=57.3
Q ss_pred HHHhhhcCCCeeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccCCCCCCCCCCCchhHHHHHHHHHHHHHHHHH
Q 035867 78 AIMEAFEGESKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTSKPVGGSGAGGLAAVQKVMKEIGNRMEKFAR 157 (362)
Q Consensus 78 aIleA~~g~~~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~~~~~~~~~~~~~~~~~~l~etg~rL~~fA~ 157 (362)
.+++.+.....-+|+|+|.|.|.--..|.+.+ |..++|||+.+. ..++...++
T Consensus 24 ~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~-------~~~~v~~~D~s~--------------~~~~~a~~~------ 76 (259)
T 2p35_A 24 DLLAQVPLERVLNGYDLGCGPGNSTELLTDRY-------GVNVITGIDSDD--------------DMLEKAADR------ 76 (259)
T ss_dssp HHHTTCCCSCCSSEEEETCTTTHHHHHHHHHH-------CTTSEEEEESCH--------------HHHHHHHHH------
T ss_pred HHHHhcCCCCCCEEEEecCcCCHHHHHHHHhC-------CCCEEEEEECCH--------------HHHHHHHHh------
Confidence 45555554455689999999886443443333 234799998642 233333222
Q ss_pred HcCCcEEEEEeeccCCcccCccccccccCCCeEEEeccccccccccccCcHHHHHHHH-HhcCCcEEEEE
Q 035867 158 LMGVPFEFNVIHHVGDLCDLNLAELDVRSDEALAINCIGALHTIAAVDDRRDVLISNL-RSLQPRIITVV 226 (362)
Q Consensus 158 ~~gvpfeF~~v~~~~~~e~l~~~~l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~vvvlv 226 (362)
.-..+|.. .+++++. .++..=+|-|...+|++. + ...+|+.+ +.|+|.-.+++
T Consensus 77 --~~~~~~~~----~d~~~~~------~~~~fD~v~~~~~l~~~~---~-~~~~l~~~~~~L~pgG~l~~ 130 (259)
T 2p35_A 77 --LPNTNFGK----ADLATWK------PAQKADLLYANAVFQWVP---D-HLAVLSQLMDQLESGGVLAV 130 (259)
T ss_dssp --STTSEEEE----CCTTTCC------CSSCEEEEEEESCGGGST---T-HHHHHHHHGGGEEEEEEEEE
T ss_pred --CCCcEEEE----CChhhcC------ccCCcCEEEEeCchhhCC---C-HHHHHHHHHHhcCCCeEEEE
Confidence 22344432 2445442 122222334455678883 3 44566655 77899876664
No 72
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=73.04 E-value=21 Score=30.05 Aligned_cols=102 Identities=13% Similarity=0.164 Sum_probs=53.8
Q ss_pred eeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCcEEEEE
Q 035867 88 KLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTSKPVGGSGAGGLAAVQKVMKEIGNRMEKFARLMGVPFEFNV 167 (362)
Q Consensus 88 ~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~~~~~~~~~~~~~~~~~~l~etg~rL~~fA~~~gvpfeF~~ 167 (362)
.-+|+|+|.|.|.-...++ +. ++ .++|||+.+. ..++.+.+++ +..+..++|..
T Consensus 24 ~~~vLDiGcG~G~~~~~~~---~~-~~----~~v~~vD~s~--------------~~~~~a~~~~----~~~~~~~~~~~ 77 (209)
T 2p8j_A 24 DKTVLDCGAGGDLPPLSIF---VE-DG----YKTYGIEISD--------------LQLKKAENFS----RENNFKLNISK 77 (209)
T ss_dssp CSEEEEESCCSSSCTHHHH---HH-TT----CEEEEEECCH--------------HHHHHHHHHH----HHHTCCCCEEE
T ss_pred CCEEEEECCCCCHHHHHHH---Hh-CC----CEEEEEECCH--------------HHHHHHHHHH----HhcCCceEEEE
Confidence 3479999998876433333 22 22 4899998653 2344433333 22344444432
Q ss_pred eeccCCcccCccccccccCCCeEEEeccccccccccccCcHHHHHHH-HHhcCCcEEEEE
Q 035867 168 IHHVGDLCDLNLAELDVRSDEALAINCIGALHTIAAVDDRRDVLISN-LRSLQPRIITVV 226 (362)
Q Consensus 168 v~~~~~~e~l~~~~l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~-ir~L~P~vvvlv 226 (362)
.+++++. ..++..=+|-|...+||+. ......+|+. .+.|+|.-++++
T Consensus 78 ----~d~~~~~-----~~~~~fD~v~~~~~l~~~~--~~~~~~~l~~~~~~LkpgG~l~~ 126 (209)
T 2p8j_A 78 ----GDIRKLP-----FKDESMSFVYSYGTIFHMR--KNDVKEAIDEIKRVLKPGGLACI 126 (209)
T ss_dssp ----CCTTSCC-----SCTTCEEEEEECSCGGGSC--HHHHHHHHHHHHHHEEEEEEEEE
T ss_pred ----CchhhCC-----CCCCceeEEEEcChHHhCC--HHHHHHHHHHHHHHcCCCcEEEE
Confidence 2444432 2233222333445678874 1234555654 467899877765
No 73
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=72.99 E-value=21 Score=33.48 Aligned_cols=114 Identities=10% Similarity=0.104 Sum_probs=66.0
Q ss_pred HHHHHhhhcCCCeeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccCCCCCCCCCCCchhHHHHHHHHHHHHHHH
Q 035867 76 NGAIMEAFEGESKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTSKPVGGSGAGGLAAVQKVMKEIGNRMEKF 155 (362)
Q Consensus 76 NqaIleA~~g~~~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~~~~~~~~~~~~~~~~~~l~etg~rL~~f 155 (362)
.+.|++.+.-.+.-+|+|+|.|.|. +...|+.+. |.+++|+++. .. .++.+.+++
T Consensus 179 ~~~l~~~~~~~~~~~vLDvG~G~G~----~~~~l~~~~---p~~~~~~~D~-~~--------------~~~~a~~~~--- 233 (359)
T 1x19_A 179 IQLLLEEAKLDGVKKMIDVGGGIGD----ISAAMLKHF---PELDSTILNL-PG--------------AIDLVNENA--- 233 (359)
T ss_dssp HHHHHHHCCCTTCCEEEEESCTTCH----HHHHHHHHC---TTCEEEEEEC-GG--------------GHHHHHHHH---
T ss_pred HHHHHHhcCCCCCCEEEEECCcccH----HHHHHHHHC---CCCeEEEEec-HH--------------HHHHHHHHH---
Confidence 4577887765667799999999986 445555542 4679999986 32 233333333
Q ss_pred HHHcCCc--EEEEEeeccCCcccCccccccccCCCeEEEeccccccccccccCcHHHHHHHH-HhcCCcEEE-EEcc
Q 035867 156 ARLMGVP--FEFNVIHHVGDLCDLNLAELDVRSDEALAINCIGALHTIAAVDDRRDVLISNL-RSLQPRIIT-VVEE 228 (362)
Q Consensus 156 A~~~gvp--feF~~v~~~~~~e~l~~~~l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~vvv-lvE~ 228 (362)
+..|++ .+|.. .++.+.. +.+++.++. ...||++.+ .....+|+.+ +.|+|.-.+ ++|.
T Consensus 234 -~~~~~~~~v~~~~----~d~~~~~-----~~~~D~v~~--~~vlh~~~d--~~~~~~l~~~~~~L~pgG~l~i~e~ 296 (359)
T 1x19_A 234 -AEKGVADRMRGIA----VDIYKES-----YPEADAVLF--CRILYSANE--QLSTIMCKKAFDAMRSGGRLLILDM 296 (359)
T ss_dssp -HHTTCTTTEEEEE----CCTTTSC-----CCCCSEEEE--ESCGGGSCH--HHHHHHHHHHHTTCCTTCEEEEEEE
T ss_pred -HhcCCCCCEEEEe----CccccCC-----CCCCCEEEE--echhccCCH--HHHHHHHHHHHHhcCCCCEEEEEec
Confidence 334553 56633 2444331 223345544 345687742 2245667665 567997655 4564
No 74
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=72.89 E-value=21 Score=34.16 Aligned_cols=117 Identities=15% Similarity=0.030 Sum_probs=64.5
Q ss_pred HHHHHHhhhcCCCeeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccCCCCCCCCCCCchhHHHHHHHHHHHHHH
Q 035867 75 CNGAIMEAFEGESKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTSKPVGGSGAGGLAAVQKVMKEIGNRMEK 154 (362)
Q Consensus 75 aNqaIleA~~g~~~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~~~~~~~~~~~~~~~~~~l~etg~rL~~ 154 (362)
..+.+++.+.....-+|+|+|.|.|. +...++.+. |..++|||+.+. ..++.+.++
T Consensus 210 ~~~~ll~~l~~~~~~~VLDlGcG~G~----~s~~la~~~---p~~~V~gvD~s~--------------~al~~Ar~n--- 265 (375)
T 4dcm_A 210 GARFFMQHLPENLEGEIVDLGCGNGV----IGLTLLDKN---PQAKVVFVDESP--------------MAVASSRLN--- 265 (375)
T ss_dssp HHHHHHHTCCCSCCSEEEEETCTTCH----HHHHHHHHC---TTCEEEEEESCH--------------HHHHHHHHH---
T ss_pred HHHHHHHhCcccCCCeEEEEeCcchH----HHHHHHHHC---CCCEEEEEECcH--------------HHHHHHHHH---
Confidence 45578888876666789999999984 445555542 456899998652 234444333
Q ss_pred HHHHcCC----cEEEEEeeccCCcccCccccccccCCCeEEEeccccccccccc-cCcHHHHHHHH-HhcCCcEEEEE
Q 035867 155 FARLMGV----PFEFNVIHHVGDLCDLNLAELDVRSDEALAINCIGALHTIAAV-DDRRDVLISNL-RSLQPRIITVV 226 (362)
Q Consensus 155 fA~~~gv----pfeF~~v~~~~~~e~l~~~~l~~~~~E~laVN~~~~Lh~l~~~-~~~~~~~L~~i-r~L~P~vvvlv 226 (362)
++..|+ .++|..- ++.+. +.-..=+.|+.|-.| |+.... ......+++.+ +.|+|.-.+++
T Consensus 266 -~~~ngl~~~~~v~~~~~----D~~~~----~~~~~fD~Ii~nppf--h~~~~~~~~~~~~~l~~~~~~LkpgG~l~i 332 (375)
T 4dcm_A 266 -VETNMPEALDRCEFMIN----NALSG----VEPFRFNAVLCNPPF--HQQHALTDNVAWEMFHHARRCLKINGELYI 332 (375)
T ss_dssp -HHHHCGGGGGGEEEEEC----STTTT----CCTTCEEEEEECCCC---------CCHHHHHHHHHHHHEEEEEEEEE
T ss_pred -HHHcCCCcCceEEEEec----hhhcc----CCCCCeeEEEECCCc--ccCcccCHHHHHHHHHHHHHhCCCCcEEEE
Confidence 333454 3566432 33321 111112467777665 443221 22234566655 55899887765
No 75
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=72.71 E-value=27 Score=28.33 Aligned_cols=41 Identities=15% Similarity=-0.005 Sum_probs=28.3
Q ss_pred HHHhhhcCCCeeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccC
Q 035867 78 AIMEAFEGESKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTS 127 (362)
Q Consensus 78 aIleA~~g~~~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~ 127 (362)
.+++.+.-.+.-.|+|+|.|.|. +...|+.+. . ++|||+.+
T Consensus 8 ~~~~~~~~~~~~~vLDiG~G~G~----~~~~l~~~~----~-~v~~vD~s 48 (170)
T 3i9f_A 8 EYLPNIFEGKKGVIVDYGCGNGF----YCKYLLEFA----T-KLYCIDIN 48 (170)
T ss_dssp TTHHHHHSSCCEEEEEETCTTCT----THHHHHTTE----E-EEEEECSC
T ss_pred HHHHhcCcCCCCeEEEECCCCCH----HHHHHHhhc----C-eEEEEeCC
Confidence 34555555667789999999886 445555543 2 89999864
No 76
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=72.50 E-value=37 Score=27.49 Aligned_cols=44 Identities=14% Similarity=0.107 Sum_probs=31.4
Q ss_pred HHHHhhhcCCCeeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccC
Q 035867 77 GAIMEAFEGESKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTS 127 (362)
Q Consensus 77 qaIleA~~g~~~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~ 127 (362)
+.+++.+.-...-+|+|+|.|.| .+...|+.+. |..++|+++.+
T Consensus 15 ~~~~~~~~~~~~~~vldiG~G~G----~~~~~l~~~~---~~~~v~~vD~~ 58 (178)
T 3hm2_A 15 ALAISALAPKPHETLWDIGGGSG----SIAIEWLRST---PQTTAVCFEIS 58 (178)
T ss_dssp HHHHHHHCCCTTEEEEEESTTTT----HHHHHHHTTS---SSEEEEEECSC
T ss_pred HHHHHHhcccCCCeEEEeCCCCC----HHHHHHHHHC---CCCeEEEEeCC
Confidence 44566666566678999999987 4555666653 45789999864
No 77
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=72.35 E-value=18 Score=34.02 Aligned_cols=114 Identities=11% Similarity=0.080 Sum_probs=63.5
Q ss_pred HHHHHhhhcCCCeeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccCCCCCCCCCCCchhHHHHHHHHHHHHHHH
Q 035867 76 NGAIMEAFEGESKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTSKPVGGSGAGGLAAVQKVMKEIGNRMEKF 155 (362)
Q Consensus 76 NqaIleA~~g~~~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~~~~~~~~~~~~~~~~~~l~etg~rL~~f 155 (362)
.++|++.+...+.-+|+|+|.|.|. +...++.++ .-++|||+.+. .++.+. +.
T Consensus 39 ~~~i~~~l~~~~~~~VLDiGcGtG~----ls~~la~~g----~~~V~~vD~s~---------------~~~~a~----~~ 91 (348)
T 2y1w_A 39 QRAILQNHTDFKDKIVLDVGCGSGI----LSFFAAQAG----ARKIYAVEAST---------------MAQHAE----VL 91 (348)
T ss_dssp HHHHHHTGGGTTTCEEEEETCTTSH----HHHHHHHTT----CSEEEEEECST---------------HHHHHH----HH
T ss_pred HHHHHhccccCCcCEEEEcCCCccH----HHHHHHhCC----CCEEEEECCHH---------------HHHHHH----HH
Confidence 4678887765556699999999885 555666652 24899998642 122222 22
Q ss_pred HHHcCCc--EEEEEeeccCCcccCccccccccCCCeEEEeccccccccccccCcHHHHHHHHHhcCCcEEEEEc
Q 035867 156 ARLMGVP--FEFNVIHHVGDLCDLNLAELDVRSDEALAINCIGALHTIAAVDDRRDVLISNLRSLQPRIITVVE 227 (362)
Q Consensus 156 A~~~gvp--feF~~v~~~~~~e~l~~~~l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~ir~L~P~vvvlvE 227 (362)
++..|++ .+| +. .+++++... ..=+.|+.+.+ ++|+.. ....+.+...-+-|+|.-+++.+
T Consensus 92 ~~~~~l~~~v~~--~~--~d~~~~~~~----~~~D~Ivs~~~--~~~~~~-~~~~~~l~~~~~~LkpgG~li~~ 154 (348)
T 2y1w_A 92 VKSNNLTDRIVV--IP--GKVEEVSLP----EQVDIIISEPM--GYMLFN-ERMLESYLHAKKYLKPSGNMFPT 154 (348)
T ss_dssp HHHTTCTTTEEE--EE--SCTTTCCCS----SCEEEEEECCC--BTTBTT-TSHHHHHHHGGGGEEEEEEEESC
T ss_pred HHHcCCCCcEEE--EE--cchhhCCCC----CceeEEEEeCc--hhcCCh-HHHHHHHHHHHhhcCCCeEEEEe
Confidence 3344553 444 32 355554321 11123433323 456542 23345555556778999888753
No 78
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=72.22 E-value=37 Score=27.66 Aligned_cols=113 Identities=15% Similarity=0.066 Sum_probs=62.2
Q ss_pred HHHHHHhhhcCCCeeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccCCCCCCCCCCCchhHHHHHHHHHHHHHH
Q 035867 75 CNGAIMEAFEGESKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTSKPVGGSGAGGLAAVQKVMKEIGNRMEK 154 (362)
Q Consensus 75 aNqaIleA~~g~~~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~~~~~~~~~~~~~~~~~~l~etg~rL~~ 154 (362)
..+.+++.+.-...-+|+|+|.|.|. +...++.+ ..++||++.+. ..++.+.++
T Consensus 40 ~~~~l~~~~~~~~~~~vLdiG~G~G~----~~~~~~~~-----~~~v~~~D~~~--------------~~~~~a~~~--- 93 (194)
T 1dus_A 40 GTKILVENVVVDKDDDILDLGCGYGV----IGIALADE-----VKSTTMADINR--------------RAIKLAKEN--- 93 (194)
T ss_dssp HHHHHHHHCCCCTTCEEEEETCTTSH----HHHHHGGG-----SSEEEEEESCH--------------HHHHHHHHH---
T ss_pred HHHHHHHHcccCCCCeEEEeCCCCCH----HHHHHHHc-----CCeEEEEECCH--------------HHHHHHHHH---
Confidence 34667777765566789999999884 45566665 24799998642 233333332
Q ss_pred HHHHcCCc---EEEEEeeccCCcccCccccccccCCCeEEEeccccccccccccCcHHHHHHH-HHhcCCcEEEEEc
Q 035867 155 FARLMGVP---FEFNVIHHVGDLCDLNLAELDVRSDEALAINCIGALHTIAAVDDRRDVLISN-LRSLQPRIITVVE 227 (362)
Q Consensus 155 fA~~~gvp---feF~~v~~~~~~e~l~~~~l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~-ir~L~P~vvvlvE 227 (362)
++..|++ .+|..- ++.+... -..=+.|+.|.. +|+-. ...+.+|+. .+.|+|.-.+++.
T Consensus 94 -~~~~~~~~~~~~~~~~----d~~~~~~----~~~~D~v~~~~~--~~~~~---~~~~~~l~~~~~~L~~gG~l~~~ 156 (194)
T 1dus_A 94 -IKLNNLDNYDIRVVHS----DLYENVK----DRKYNKIITNPP--IRAGK---EVLHRIIEEGKELLKDNGEIWVV 156 (194)
T ss_dssp -HHHTTCTTSCEEEEEC----STTTTCT----TSCEEEEEECCC--STTCH---HHHHHHHHHHHHHEEEEEEEEEE
T ss_pred -HHHcCCCccceEEEEC----chhcccc----cCCceEEEECCC--cccch---hHHHHHHHHHHHHcCCCCEEEEE
Confidence 3445665 565332 3333211 111245555544 34311 234455654 4668998777653
No 79
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=71.88 E-value=33 Score=29.51 Aligned_cols=99 Identities=18% Similarity=0.157 Sum_probs=54.9
Q ss_pred CeeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCcEEEE
Q 035867 87 SKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTSKPVGGSGAGGLAAVQKVMKEIGNRMEKFARLMGVPFEFN 166 (362)
Q Consensus 87 ~~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~~~~~~~~~~~~~~~~~~l~etg~rL~~fA~~~gvpfeF~ 166 (362)
+.-+|+|+|.|.|. +...|+.+ + .++|||+.+. ..++.+.++. .+...+|.
T Consensus 53 ~~~~vLDiG~G~G~----~~~~l~~~--~---~~v~~vD~s~--------------~~~~~a~~~~------~~~~~~~~ 103 (242)
T 3l8d_A 53 KEAEVLDVGCGDGY----GTYKLSRT--G---YKAVGVDISE--------------VMIQKGKERG------EGPDLSFI 103 (242)
T ss_dssp TTCEEEEETCTTSH----HHHHHHHT--T---CEEEEEESCH--------------HHHHHHHTTT------CBTTEEEE
T ss_pred CCCeEEEEcCCCCH----HHHHHHHc--C---CeEEEEECCH--------------HHHHHHHhhc------ccCCceEE
Confidence 34489999999884 55666666 2 3799998642 2233222211 12344553
Q ss_pred EeeccCCcccCccccccccCCCeEEEeccccccccccccCcHHHHHHHHHhcCCcEEEEE
Q 035867 167 VIHHVGDLCDLNLAELDVRSDEALAINCIGALHTIAAVDDRRDVLISNLRSLQPRIITVV 226 (362)
Q Consensus 167 ~v~~~~~~e~l~~~~l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~ir~L~P~vvvlv 226 (362)
. .++.++. ..++..=+|-|...+||+. ++...+-...+.|+|.-.+++
T Consensus 104 ~----~d~~~~~-----~~~~~fD~v~~~~~l~~~~---~~~~~l~~~~~~L~pgG~l~i 151 (242)
T 3l8d_A 104 K----GDLSSLP-----FENEQFEAIMAINSLEWTE---EPLRALNEIKRVLKSDGYACI 151 (242)
T ss_dssp E----CBTTBCS-----SCTTCEEEEEEESCTTSSS---CHHHHHHHHHHHEEEEEEEEE
T ss_pred E----cchhcCC-----CCCCCccEEEEcChHhhcc---CHHHHHHHHHHHhCCCeEEEE
Confidence 3 2444432 2234344455566678883 344433445577899876665
No 80
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=69.62 E-value=24 Score=29.81 Aligned_cols=96 Identities=17% Similarity=0.178 Sum_probs=55.1
Q ss_pred eeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCcEEEEE
Q 035867 88 KLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTSKPVGGSGAGGLAAVQKVMKEIGNRMEKFARLMGVPFEFNV 167 (362)
Q Consensus 88 ~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~~~~~~~~~~~~~~~~~~l~etg~rL~~fA~~~gvpfeF~~ 167 (362)
.-.|+|+|.|.|. +...|+.+ + .++|||+.+. ..++.+.+++ ++.+.-
T Consensus 44 ~~~vLDiGcG~G~----~~~~l~~~--~---~~v~~vD~s~--------------~~~~~a~~~~-------~~~~~~-- 91 (211)
T 3e23_A 44 GAKILELGCGAGY----QAEAMLAA--G---FDVDATDGSP--------------ELAAEASRRL-------GRPVRT-- 91 (211)
T ss_dssp TCEEEESSCTTSH----HHHHHHHT--T---CEEEEEESCH--------------HHHHHHHHHH-------TSCCEE--
T ss_pred CCcEEEECCCCCH----HHHHHHHc--C---CeEEEECCCH--------------HHHHHHHHhc-------CCceEE--
Confidence 4479999999885 56666665 2 3899998642 2344333332 444322
Q ss_pred eeccCCcccCccccccccCCCeEEEeccccccccccccCcHHHHHHHH-HhcCCcEEEEEc
Q 035867 168 IHHVGDLCDLNLAELDVRSDEALAINCIGALHTIAAVDDRRDVLISNL-RSLQPRIITVVE 227 (362)
Q Consensus 168 v~~~~~~e~l~~~~l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~vvvlvE 227 (362)
.+++++. .++..=+|-|...|||+.. .....+|+.+ +.|+|.-++++.
T Consensus 92 ----~d~~~~~------~~~~fD~v~~~~~l~~~~~--~~~~~~l~~~~~~LkpgG~l~~~ 140 (211)
T 3e23_A 92 ----MLFHQLD------AIDAYDAVWAHACLLHVPR--DELADVLKLIWRALKPGGLFYAS 140 (211)
T ss_dssp ----CCGGGCC------CCSCEEEEEECSCGGGSCH--HHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ----eeeccCC------CCCcEEEEEecCchhhcCH--HHHHHHHHHHHHhcCCCcEEEEE
Confidence 2344432 1232334445666788852 2345566555 667998777753
No 81
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=69.51 E-value=8.7 Score=35.14 Aligned_cols=42 Identities=12% Similarity=0.146 Sum_probs=26.8
Q ss_pred HHhhhcCC--CeeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccC
Q 035867 79 IMEAFEGE--SKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTS 127 (362)
Q Consensus 79 IleA~~g~--~~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~ 127 (362)
+++.+... +.-.|+|+|.|.| .+...|+.+-+ ..+||||+.+
T Consensus 36 ~l~~l~~~~~~~~~VLDiGCG~G----~~~~~la~~~~---~~~v~gvDis 79 (292)
T 3g07_A 36 RLRVLKPEWFRGRDVLDLGCNVG----HLTLSIACKWG---PSRMVGLDID 79 (292)
T ss_dssp GGGTSCGGGTTTSEEEEESCTTC----HHHHHHHHHTC---CSEEEEEESC
T ss_pred HHHhhhhhhcCCCcEEEeCCCCC----HHHHHHHHHcC---CCEEEEECCC
Confidence 44444332 3457999999998 34555555532 2489999865
No 82
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=68.78 E-value=34 Score=32.20 Aligned_cols=43 Identities=16% Similarity=0.200 Sum_probs=30.1
Q ss_pred HHHHhhhc-CCCeeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEecc
Q 035867 77 GAIMEAFE-GESKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVT 126 (362)
Q Consensus 77 qaIleA~~-g~~~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~ 126 (362)
..|++.+. -.+.-+|+|+|.|.|. +...|+.+- |.+++|+++.
T Consensus 198 ~~l~~~~~~~~~~~~vLDvG~G~G~----~~~~l~~~~---~~~~~~~~D~ 241 (372)
T 1fp1_D 198 KRMLEIYTGFEGISTLVDVGGGSGR----NLELIISKY---PLIKGINFDL 241 (372)
T ss_dssp HHHHHHCCTTTTCSEEEEETCTTSH----HHHHHHHHC---TTCEEEEEEC
T ss_pred HHHHHHhhccCCCCEEEEeCCCCcH----HHHHHHHHC---CCCeEEEeCh
Confidence 46677764 2445789999999885 555666553 5678898885
No 83
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=68.52 E-value=31 Score=29.93 Aligned_cols=113 Identities=10% Similarity=0.070 Sum_probs=62.0
Q ss_pred HHHHHhhhcCCCeeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccCCCCCCCCCCCchhHHHHHHHHHHHHHHH
Q 035867 76 NGAIMEAFEGESKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTSKPVGGSGAGGLAAVQKVMKEIGNRMEKF 155 (362)
Q Consensus 76 NqaIleA~~g~~~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~~~~~~~~~~~~~~~~~~l~etg~rL~~f 155 (362)
...+++.+.....-+|+|+|.|.|. +...|+.+. ..++|+|+.+. ..++.+.+++.+
T Consensus 82 ~~~~l~~l~~~~~~~vLDiG~G~G~----~~~~l~~~~----~~~v~~vD~s~--------------~~~~~a~~~~~~- 138 (254)
T 1xtp_A 82 SRNFIASLPGHGTSRALDCGAGIGR----ITKNLLTKL----YATTDLLEPVK--------------HMLEEAKRELAG- 138 (254)
T ss_dssp HHHHHHTSTTCCCSEEEEETCTTTH----HHHHTHHHH----CSEEEEEESCH--------------HHHHHHHHHTTT-
T ss_pred HHHHHHhhcccCCCEEEEECCCcCH----HHHHHHHhh----cCEEEEEeCCH--------------HHHHHHHHHhcc-
Confidence 3567777766667899999999886 334444432 23799998642 234333333211
Q ss_pred HHHcCCcEEEEEeeccCCcccCccccccccCCCeEEEeccccccccccccCcHHHHHHH-HHhcCCcEEEEE
Q 035867 156 ARLMGVPFEFNVIHHVGDLCDLNLAELDVRSDEALAINCIGALHTIAAVDDRRDVLISN-LRSLQPRIITVV 226 (362)
Q Consensus 156 A~~~gvpfeF~~v~~~~~~e~l~~~~l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~-ir~L~P~vvvlv 226 (362)
. -..+|.. .+++++. ..++..=+|-|...|||+.. .....+|+. .+.|+|.-.+++
T Consensus 139 ---~-~~~~~~~----~d~~~~~-----~~~~~fD~v~~~~~l~~~~~--~~~~~~l~~~~~~LkpgG~l~i 195 (254)
T 1xtp_A 139 ---M-PVGKFIL----ASMETAT-----LPPNTYDLIVIQWTAIYLTD--ADFVKFFKHCQQALTPNGYIFF 195 (254)
T ss_dssp ---S-SEEEEEE----SCGGGCC-----CCSSCEEEEEEESCGGGSCH--HHHHHHHHHHHHHEEEEEEEEE
T ss_pred ---C-CceEEEE----ccHHHCC-----CCCCCeEEEEEcchhhhCCH--HHHHHHHHHHHHhcCCCeEEEE
Confidence 1 2344422 2444432 22332323445556888852 224455654 567899877665
No 84
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=68.23 E-value=8.3 Score=34.24 Aligned_cols=97 Identities=6% Similarity=0.078 Sum_probs=57.3
Q ss_pred EEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCcEEEEEee
Q 035867 90 HIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTSKPVGGSGAGGLAAVQKVMKEIGNRMEKFARLMGVPFEFNVIH 169 (362)
Q Consensus 90 HIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~~~~~~~~~~~~~~~~~~l~etg~rL~~fA~~~gvpfeF~~v~ 169 (362)
+|+|+|.|.| +|--.++.. .|..+++|++.+. +.++-+. +.|+..|+...+...
T Consensus 52 ~VLDlGCG~G----plAl~l~~~---~p~a~~~A~Di~~--------------~~leiar----~~~~~~g~~~~v~~~- 105 (200)
T 3fzg_A 52 SILDFGCGFN----PLALYQWNE---NEKIIYHAYDIDR--------------AEIAFLS----SIIGKLKTTIKYRFL- 105 (200)
T ss_dssp EEEEETCTTH----HHHHHHHCS---SCCCEEEEECSCH--------------HHHHHHH----HHHHHSCCSSEEEEE-
T ss_pred eEEEecCCCC----HHHHHHHhc---CCCCEEEEEeCCH--------------HHHHHHH----HHHHhcCCCccEEEe-
Confidence 7899988765 455555554 3556999998653 3454333 345677887544332
Q ss_pred ccCCcccCccccccccCC--CeEEEeccccccccccccCcHHHHHHHHHhcCCcEEEEE
Q 035867 170 HVGDLCDLNLAELDVRSD--EALAINCIGALHTIAAVDDRRDVLISNLRSLQPRIITVV 226 (362)
Q Consensus 170 ~~~~~e~l~~~~l~~~~~--E~laVN~~~~Lh~l~~~~~~~~~~L~~ir~L~P~vvvlv 226 (362)
+..+. ..++ +++..+. .||+| . +....+.+.++.|+|..+++.
T Consensus 106 ---d~~~~------~~~~~~DvVLa~k--~LHlL-~--~~~~al~~v~~~L~pggvfIS 150 (200)
T 3fzg_A 106 ---NKESD------VYKGTYDVVFLLK--MLPVL-K--QQDVNILDFLQLFHTQNFVIS 150 (200)
T ss_dssp ---CCHHH------HTTSEEEEEEEET--CHHHH-H--HTTCCHHHHHHTCEEEEEEEE
T ss_pred ---ccccc------CCCCCcChhhHhh--HHHhh-h--hhHHHHHHHHHHhCCCCEEEE
Confidence 12111 1122 3333333 35777 3 334456688999999998885
No 85
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=67.82 E-value=36 Score=31.59 Aligned_cols=114 Identities=18% Similarity=0.185 Sum_probs=63.0
Q ss_pred HHHHhhhcCCCeeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccCCCCCCCCCCCchhHHHHHHHHHHHHHHHH
Q 035867 77 GAIMEAFEGESKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTSKPVGGSGAGGLAAVQKVMKEIGNRMEKFA 156 (362)
Q Consensus 77 qaIleA~~g~~~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~~~~~~~~~~~~~~~~~~l~etg~rL~~fA 156 (362)
+.|++.+.-.+.-+|+|+|.|.|. +...|+.+. |.+++|+++. .. .++.+.+++
T Consensus 173 ~~l~~~~~~~~~~~vLDvG~G~G~----~~~~l~~~~---~~~~~~~~D~-~~--------------~~~~a~~~~---- 226 (360)
T 1tw3_A 173 DAPAAAYDWTNVRHVLDVGGGKGG----FAAAIARRA---PHVSATVLEM-AG--------------TVDTARSYL---- 226 (360)
T ss_dssp HHHHHHSCCTTCSEEEEETCTTSH----HHHHHHHHC---TTCEEEEEEC-TT--------------HHHHHHHHH----
T ss_pred HHHHHhCCCccCcEEEEeCCcCcH----HHHHHHHhC---CCCEEEEecC-HH--------------HHHHHHHHH----
Confidence 456777665566799999999985 445555542 5688999985 21 243333333
Q ss_pred HHcCC--cEEEEEeeccCCcccCccccccccCCCeEEEeccccccccccccCcHHHHHHHH-HhcCCcEEEE-Eccc
Q 035867 157 RLMGV--PFEFNVIHHVGDLCDLNLAELDVRSDEALAINCIGALHTIAAVDDRRDVLISNL-RSLQPRIITV-VEEE 229 (362)
Q Consensus 157 ~~~gv--pfeF~~v~~~~~~e~l~~~~l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~vvvl-vE~e 229 (362)
+..|+ ..+|..- ++.+- + ++..=+|-+...||++.+ .....+|+.+ +.|+|.-.++ +|..
T Consensus 227 ~~~~~~~~v~~~~~----d~~~~----~---~~~~D~v~~~~vl~~~~~--~~~~~~l~~~~~~L~pgG~l~i~e~~ 290 (360)
T 1tw3_A 227 KDEGLSDRVDVVEG----DFFEP----L---PRKADAIILSFVLLNWPD--HDAVRILTRCAEALEPGGRILIHERD 290 (360)
T ss_dssp HHTTCTTTEEEEEC----CTTSC----C---SSCEEEEEEESCGGGSCH--HHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred HhcCCCCceEEEeC----CCCCC----C---CCCccEEEEcccccCCCH--HHHHHHHHHHHHhcCCCcEEEEEEEe
Confidence 34455 3666432 33221 1 111223444455787742 1224566655 5679987544 5543
No 86
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=67.75 E-value=22 Score=32.34 Aligned_cols=105 Identities=14% Similarity=0.125 Sum_probs=59.1
Q ss_pred CeeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCc--EE
Q 035867 87 SKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTSKPVGGSGAGGLAAVQKVMKEIGNRMEKFARLMGVP--FE 164 (362)
Q Consensus 87 ~~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~~~~~~~~~~~~~~~~~~l~etg~rL~~fA~~~gvp--fe 164 (362)
..-+|+|+|.|.|. +...||.+ ..|..++|||+.+. ..++.+.+ .++..|++ .+
T Consensus 118 ~~~~vLDiGcG~G~----~~~~la~~--~~~~~~v~gvD~s~--------------~~~~~a~~----~~~~~~~~~~v~ 173 (305)
T 3ocj_A 118 PGCVVASVPCGWMS----ELLALDYS--ACPGVQLVGIDYDP--------------EALDGATR----LAAGHALAGQIT 173 (305)
T ss_dssp TTCEEEETTCTTCH----HHHTSCCT--TCTTCEEEEEESCH--------------HHHHHHHH----HHTTSTTGGGEE
T ss_pred CCCEEEEecCCCCH----HHHHHHHh--cCCCCeEEEEECCH--------------HHHHHHHH----HHHhcCCCCceE
Confidence 34579999999884 45555433 23567999998643 23433333 34455665 55
Q ss_pred EEEeeccCCcccCccccccccCCCeEEEeccccccccccccCcHHHHHHHH-HhcCCcEEEEE
Q 035867 165 FNVIHHVGDLCDLNLAELDVRSDEALAINCIGALHTIAAVDDRRDVLISNL-RSLQPRIITVV 226 (362)
Q Consensus 165 F~~v~~~~~~e~l~~~~l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~vvvlv 226 (362)
|.. .++.++.. . +..=+|-|...+||+.+. .....+|+.+ +.|+|.-.+++
T Consensus 174 ~~~----~d~~~~~~-----~-~~fD~v~~~~~~~~~~~~-~~~~~~l~~~~~~LkpgG~l~i 225 (305)
T 3ocj_A 174 LHR----QDAWKLDT-----R-EGYDLLTSNGLNIYEPDD-ARVTELYRRFWQALKPGGALVT 225 (305)
T ss_dssp EEE----CCGGGCCC-----C-SCEEEEECCSSGGGCCCH-HHHHHHHHHHHHHEEEEEEEEE
T ss_pred EEE----CchhcCCc-----c-CCeEEEEECChhhhcCCH-HHHHHHHHHHHHhcCCCeEEEE
Confidence 533 34554422 1 222234455567887532 1223356554 67899888876
No 87
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=67.58 E-value=20 Score=33.17 Aligned_cols=110 Identities=16% Similarity=0.115 Sum_probs=60.6
Q ss_pred HhhhcCCCeeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHc
Q 035867 80 MEAFEGESKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTSKPVGGSGAGGLAAVQKVMKEIGNRMEKFARLM 159 (362)
Q Consensus 80 leA~~g~~~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~~~~~~~~~~~~~~~~~~l~etg~rL~~fA~~~ 159 (362)
++.+.-.+..+|+|+|.|.| .+...|+.+. |.+++|+++.+ ..++...+++ +..
T Consensus 162 ~~~~~~~~~~~vlDvG~G~G----~~~~~l~~~~---p~~~~~~~D~~---------------~~~~~a~~~~----~~~ 215 (332)
T 3i53_A 162 AAKYDWAALGHVVDVGGGSG----GLLSALLTAH---EDLSGTVLDLQ---------------GPASAAHRRF----LDT 215 (332)
T ss_dssp GGSSCCGGGSEEEEETCTTS----HHHHHHHHHC---TTCEEEEEECH---------------HHHHHHHHHH----HHT
T ss_pred HHhCCCCCCCEEEEeCCChh----HHHHHHHHHC---CCCeEEEecCH---------------HHHHHHHHhh----hhc
Confidence 33333344679999999999 4555565543 56789999752 2344444433 334
Q ss_pred CC--cEEEEEeeccCCcccCccccccccCCCeEEEeccccccccccccCcHHHHHHHH-HhcCCcEEEE-Ecc
Q 035867 160 GV--PFEFNVIHHVGDLCDLNLAELDVRSDEALAINCIGALHTIAAVDDRRDVLISNL-RSLQPRIITV-VEE 228 (362)
Q Consensus 160 gv--pfeF~~v~~~~~~e~l~~~~l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~vvvl-vE~ 228 (362)
|+ ..+|..- ++.+ + +.. .-+++ -|...||++.+ .....+|+.+ +.|+|.-.++ +|.
T Consensus 216 ~~~~~v~~~~~----d~~~--~--~p~-~~D~v--~~~~vlh~~~~--~~~~~~l~~~~~~L~pgG~l~i~e~ 275 (332)
T 3i53_A 216 GLSGRAQVVVG----SFFD--P--LPA-GAGGY--VLSAVLHDWDD--LSAVAILRRCAEAAGSGGVVLVIEA 275 (332)
T ss_dssp TCTTTEEEEEC----CTTS--C--CCC-SCSEE--EEESCGGGSCH--HHHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred CcCcCeEEecC----CCCC--C--CCC-CCcEE--EEehhhccCCH--HHHHHHHHHHHHhcCCCCEEEEEee
Confidence 54 3666443 3321 1 111 22333 34455788752 2245677665 5679976655 454
No 88
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=67.36 E-value=32 Score=32.27 Aligned_cols=112 Identities=13% Similarity=0.054 Sum_probs=61.5
Q ss_pred HHHHhhhcCCCeeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccCCCCCCCCCCCchhHHHHHHHHHHHHHHHH
Q 035867 77 GAIMEAFEGESKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTSKPVGGSGAGGLAAVQKVMKEIGNRMEKFA 156 (362)
Q Consensus 77 qaIleA~~g~~~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~~~~~~~~~~~~~~~~~~l~etg~rL~~fA 156 (362)
++|++.+.-.+.-.|+|+|.|.|. +...++.+. .-+++||+.+. .++.+.++ +
T Consensus 54 ~~i~~~~~~~~~~~VLDiGcGtG~----ls~~la~~g----~~~v~gvD~s~---------------~~~~a~~~----~ 106 (340)
T 2fyt_A 54 DFIYQNPHIFKDKVVLDVGCGTGI----LSMFAAKAG----AKKVLGVDQSE---------------ILYQAMDI----I 106 (340)
T ss_dssp HHHHHCGGGTTTCEEEEETCTTSH----HHHHHHHTT----CSEEEEEESST---------------HHHHHHHH----H
T ss_pred HHHHhhhhhcCCCEEEEeeccCcH----HHHHHHHcC----CCEEEEEChHH---------------HHHHHHHH----H
Confidence 566666554445589999999884 455566652 24899998642 23333222 3
Q ss_pred HHcCC--cEEEEEeeccCCcccCccccccccCCCeEEEecc-ccccccccccCcHHHHHHHH-HhcCCcEEEEE
Q 035867 157 RLMGV--PFEFNVIHHVGDLCDLNLAELDVRSDEALAINCI-GALHTIAAVDDRRDVLISNL-RSLQPRIITVV 226 (362)
Q Consensus 157 ~~~gv--pfeF~~v~~~~~~e~l~~~~l~~~~~E~laVN~~-~~Lh~l~~~~~~~~~~L~~i-r~L~P~vvvlv 226 (362)
+..|+ ..+| +. .+++++... -..=+.|+.|.+ +.+++. ...+.+|+.+ +-|+|.-.++.
T Consensus 107 ~~~~~~~~i~~--~~--~d~~~~~~~---~~~~D~Ivs~~~~~~l~~~----~~~~~~l~~~~~~LkpgG~lip 169 (340)
T 2fyt_A 107 RLNKLEDTITL--IK--GKIEEVHLP---VEKVDVIISEWMGYFLLFE----SMLDSVLYAKNKYLAKGGSVYP 169 (340)
T ss_dssp HHTTCTTTEEE--EE--SCTTTSCCS---CSCEEEEEECCCBTTBTTT----CHHHHHHHHHHHHEEEEEEEES
T ss_pred HHcCCCCcEEE--EE--eeHHHhcCC---CCcEEEEEEcCchhhccCH----HHHHHHHHHHHhhcCCCcEEEc
Confidence 34454 3444 32 355554221 111145555542 233332 3456677765 67899887763
No 89
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=67.24 E-value=27 Score=30.07 Aligned_cols=105 Identities=12% Similarity=0.122 Sum_probs=54.9
Q ss_pred eeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCc--EEE
Q 035867 88 KLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTSKPVGGSGAGGLAAVQKVMKEIGNRMEKFARLMGVP--FEF 165 (362)
Q Consensus 88 ~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~~~~~~~~~~~~~~~~~~l~etg~rL~~fA~~~gvp--feF 165 (362)
.-+|+|+|.+.|. +...||..- +|.-++|+|+.+. ..++.+.+ .++..|+. .+|
T Consensus 59 ~~~vLdiG~G~G~----~~~~la~~~--~~~~~v~~vD~~~--------------~~~~~a~~----~~~~~~~~~~v~~ 114 (221)
T 3u81_A 59 PSLVLELGAYCGY----SAVRMARLL--QPGARLLTMEINP--------------DCAAITQQ----MLNFAGLQDKVTI 114 (221)
T ss_dssp CSEEEEECCTTSH----HHHHHHTTS--CTTCEEEEEESCH--------------HHHHHHHH----HHHHHTCGGGEEE
T ss_pred CCEEEEECCCCCH----HHHHHHHhC--CCCCEEEEEeCCh--------------HHHHHHHH----HHHHcCCCCceEE
Confidence 3479999999885 233344431 2346899998643 23433333 33445664 555
Q ss_pred EEeeccCCcccCcccccc----ccCCCeEEEeccccccccccccCcHHHHHHHHHhcCCcEEEEEc
Q 035867 166 NVIHHVGDLCDLNLAELD----VRSDEALAINCIGALHTIAAVDDRRDVLISNLRSLQPRIITVVE 227 (362)
Q Consensus 166 ~~v~~~~~~e~l~~~~l~----~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~ir~L~P~vvvlvE 227 (362)
.. .+..+.-+ .+. ...=+.|+++... |+.. +...++..++-|+|.-+++++
T Consensus 115 ~~----~d~~~~l~-~~~~~~~~~~fD~V~~d~~~--~~~~----~~~~~~~~~~~LkpgG~lv~~ 169 (221)
T 3u81_A 115 LN----GASQDLIP-QLKKKYDVDTLDMVFLDHWK--DRYL----PDTLLLEKCGLLRKGTVLLAD 169 (221)
T ss_dssp EE----SCHHHHGG-GTTTTSCCCCCSEEEECSCG--GGHH----HHHHHHHHTTCCCTTCEEEES
T ss_pred EE----CCHHHHHH-HHHHhcCCCceEEEEEcCCc--ccch----HHHHHHHhccccCCCeEEEEe
Confidence 32 23322111 111 1122455555432 3332 223456656899999999885
No 90
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=65.48 E-value=72 Score=28.42 Aligned_cols=33 Identities=18% Similarity=0.051 Sum_probs=24.8
Q ss_pred CCeeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccC
Q 035867 86 ESKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTS 127 (362)
Q Consensus 86 ~~~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~ 127 (362)
.+.-.|+|+|.|.|. +...||.+ | .++|||+.+
T Consensus 67 ~~~~~vLD~GCG~G~----~~~~La~~--G---~~V~gvD~S 99 (252)
T 2gb4_A 67 QSGLRVFFPLCGKAI----EMKWFADR--G---HTVVGVEIS 99 (252)
T ss_dssp CCSCEEEETTCTTCT----HHHHHHHT--T---CEEEEECSC
T ss_pred CCCCeEEEeCCCCcH----HHHHHHHC--C---CeEEEEECC
Confidence 345689999999885 45667776 2 379999865
No 91
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=63.84 E-value=34 Score=30.22 Aligned_cols=43 Identities=26% Similarity=0.121 Sum_probs=29.6
Q ss_pred HHHHHhhhcCCCeeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccC
Q 035867 76 NGAIMEAFEGESKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTS 127 (362)
Q Consensus 76 NqaIleA~~g~~~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~ 127 (362)
.+.|++.+.-.+.-+|+|+|.|.|. +...|+. |..++|||+.+
T Consensus 23 ~~~l~~~~~~~~~~~vLDiGcG~G~----~~~~l~~-----~~~~v~gvD~s 65 (261)
T 3ege_A 23 VNAIINLLNLPKGSVIADIGAGTGG----YSVALAN-----QGLFVYAVEPS 65 (261)
T ss_dssp HHHHHHHHCCCTTCEEEEETCTTSH----HHHHHHT-----TTCEEEEECSC
T ss_pred HHHHHHHhCCCCCCEEEEEcCcccH----HHHHHHh-----CCCEEEEEeCC
Confidence 3455666655556789999999885 4455554 33689999864
No 92
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=63.48 E-value=36 Score=30.50 Aligned_cols=43 Identities=16% Similarity=0.161 Sum_probs=31.4
Q ss_pred HHHHhhhcCCCeeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccC
Q 035867 77 GAIMEAFEGESKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTS 127 (362)
Q Consensus 77 qaIleA~~g~~~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~ 127 (362)
..|++++.-...-+|+|+|-|.|. |-..|+.++ .-++|||+.+
T Consensus 21 ~~iv~~~~~~~~~~VLDiG~G~G~----lt~~L~~~~----~~~v~avEid 63 (249)
T 3ftd_A 21 KKIAEELNIEEGNTVVEVGGGTGN----LTKVLLQHP----LKKLYVIELD 63 (249)
T ss_dssp HHHHHHTTCCTTCEEEEEESCHHH----HHHHHTTSC----CSEEEEECCC
T ss_pred HHHHHhcCCCCcCEEEEEcCchHH----HHHHHHHcC----CCeEEEEECC
Confidence 456666665555689999998774 778888772 3479999864
No 93
>2qn6_B Translation initiation factor 2 alpha subunit; initiation of translation, GTP-binding, nucleotide-binding, protein biosynthesis; HET: GDP; 2.15A {Sulfolobus solfataricus} SCOP: d.58.51.1 PDB: 2qmu_B* 3qsy_B*
Probab=63.34 E-value=8.1 Score=30.01 Aligned_cols=42 Identities=17% Similarity=0.241 Sum_probs=34.2
Q ss_pred CCCeeEEEEeccCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCcEEEE
Q 035867 115 DTPHLRLTTVVTSKPVGGSGAGGLAAVQKVMKEIGNRMEKFARLMGVPFEFN 166 (362)
Q Consensus 115 gpP~lrIT~i~~~~~~~~~~~~~~~~~~~~l~etg~rL~~fA~~~gvpfeF~ 166 (362)
|||..|||....+.. ...+.|+++-+.+.+..+..|..|+|+
T Consensus 50 gaP~Y~i~~~~~D~k----------~ge~~L~~ai~~i~~~i~~~gG~~~v~ 91 (93)
T 2qn6_B 50 GAPRYRVDVVGTNPK----------EASEALNQIISNLIKIGKEENVDISVV 91 (93)
T ss_dssp STTEEEEEEEESCHH----------HHHHHHHHHHHHHHHHHHHTTEEEEEC
T ss_pred cCCeEEEEEEecCHH----------HHHHHHHHHHHHHHHHHHHhCCEEEEE
Confidence 789999998776532 235679999999999999999999884
No 94
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=63.25 E-value=50 Score=29.24 Aligned_cols=108 Identities=15% Similarity=0.083 Sum_probs=55.4
Q ss_pred CeeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCcEEEE
Q 035867 87 SKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTSKPVGGSGAGGLAAVQKVMKEIGNRMEKFARLMGVPFEFN 166 (362)
Q Consensus 87 ~~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~~~~~~~~~~~~~~~~~~l~etg~rL~~fA~~~gvpfeF~ 166 (362)
+.-+|+|+|.|.|.--. .|+.++ ..++|||+.+. ..++.+.++ +...|++-..+
T Consensus 64 ~~~~vLDiGcG~G~~~~----~l~~~~----~~~v~gvD~s~--------------~~~~~a~~~----~~~~~~~~~v~ 117 (298)
T 1ri5_A 64 RGDSVLDLGCGKGGDLL----KYERAG----IGEYYGVDIAE--------------VSINDARVR----ARNMKRRFKVF 117 (298)
T ss_dssp TTCEEEEETCTTTTTHH----HHHHHT----CSEEEEEESCH--------------HHHHHHHHH----HHTSCCSSEEE
T ss_pred CCCeEEEECCCCCHHHH----HHHHCC----CCEEEEEECCH--------------HHHHHHHHH----HHhcCCCccEE
Confidence 34589999999986322 244432 24899998643 234433333 33455532333
Q ss_pred EeeccCCcccCccccccccCCCeEEEeccccccccccccCcHHHHHHHH-HhcCCcEEEEE
Q 035867 167 VIHHVGDLCDLNLAELDVRSDEALAINCIGALHTIAAVDDRRDVLISNL-RSLQPRIITVV 226 (362)
Q Consensus 167 ~v~~~~~~e~l~~~~l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~vvvlv 226 (362)
.+. .++.++... .++..=+|-|...+|++.........+|+.+ +.|+|.-.+++
T Consensus 118 ~~~--~d~~~~~~~----~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~ 172 (298)
T 1ri5_A 118 FRA--QDSYGRHMD----LGKEFDVISSQFSFHYAFSTSESLDIAQRNIARHLRPGGYFIM 172 (298)
T ss_dssp EEE--SCTTTSCCC----CSSCEEEEEEESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEE
T ss_pred EEE--CCccccccC----CCCCcCEEEECchhhhhcCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence 332 345443210 1232223334445677532222345566554 66799877765
No 95
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=62.41 E-value=43 Score=29.96 Aligned_cols=22 Identities=9% Similarity=0.040 Sum_probs=17.1
Q ss_pred ccchhhHHHHHhhCCCccCcCC
Q 035867 296 RETATRWSGRLHGAGFSPFMFS 317 (362)
Q Consensus 296 ~e~~~~W~~r~~~aGF~~v~ls 317 (362)
.-+.+.|...|..+||+.+.+.
T Consensus 233 ~~~~~~l~~~l~~aGf~~~~~~ 254 (289)
T 2g72_A 233 PVSEEEVREALVRSGYKVRDLR 254 (289)
T ss_dssp CCCHHHHHHHHHHTTEEEEEEE
T ss_pred cCCHHHHHHHHHHcCCeEEEee
Confidence 3456789999999999876644
No 96
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=62.36 E-value=62 Score=30.27 Aligned_cols=114 Identities=10% Similarity=0.097 Sum_probs=63.6
Q ss_pred HHHHhhhcCCCeeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccCCCCCCCCCCCchhHHHHHHHHHHHHHHHH
Q 035867 77 GAIMEAFEGESKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTSKPVGGSGAGGLAAVQKVMKEIGNRMEKFA 156 (362)
Q Consensus 77 qaIleA~~g~~~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~~~~~~~~~~~~~~~~~~l~etg~rL~~fA 156 (362)
++|++...-.+.-.|+|+|.|.|. +...++.+ +.-+++||+.+ + .++.+. +.+
T Consensus 56 ~~i~~~~~~~~~~~VLDvGcG~G~----~~~~la~~----g~~~v~gvD~s-~--------------~l~~a~----~~~ 108 (349)
T 3q7e_A 56 NSMFHNRHLFKDKVVLDVGSGTGI----LCMFAAKA----GARKVIGIECS-S--------------ISDYAV----KIV 108 (349)
T ss_dssp HHHHTCHHHHTTCEEEEESCTTSH----HHHHHHHT----TCSEEEEEECS-T--------------HHHHHH----HHH
T ss_pred HHHHhccccCCCCEEEEEeccchH----HHHHHHHC----CCCEEEEECcH-H--------------HHHHHH----HHH
Confidence 445443322233479999999984 55666665 23589999865 2 232222 334
Q ss_pred HHcCCc--EEEEEeeccCCcccCccccccccCCCeEEEeccccccccccccCcHHHHHHHH-HhcCCcEEEEEc
Q 035867 157 RLMGVP--FEFNVIHHVGDLCDLNLAELDVRSDEALAINCIGALHTIAAVDDRRDVLISNL-RSLQPRIITVVE 227 (362)
Q Consensus 157 ~~~gvp--feF~~v~~~~~~e~l~~~~l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~vvvlvE 227 (362)
+..|++ .+|.. .+++++... -..=+.|+.|.+. +.+. .....+.+|+.+ |-|+|.-+++.+
T Consensus 109 ~~~~~~~~v~~~~----~d~~~~~~~---~~~fD~Iis~~~~--~~l~-~~~~~~~~l~~~~r~LkpgG~li~~ 172 (349)
T 3q7e_A 109 KANKLDHVVTIIK----GKVEEVELP---VEKVDIIISEWMG--YCLF-YESMLNTVLHARDKWLAPDGLIFPD 172 (349)
T ss_dssp HHTTCTTTEEEEE----SCTTTCCCS---SSCEEEEEECCCB--BTBT-BTCCHHHHHHHHHHHEEEEEEEESC
T ss_pred HHcCCCCcEEEEE----CcHHHccCC---CCceEEEEEcccc--cccc-CchhHHHHHHHHHHhCCCCCEEccc
Confidence 456665 55533 356655321 1111344444432 2222 134567788777 778999888754
No 97
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=62.21 E-value=37 Score=28.92 Aligned_cols=32 Identities=6% Similarity=-0.075 Sum_probs=23.3
Q ss_pred CeeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccC
Q 035867 87 SKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTS 127 (362)
Q Consensus 87 ~~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~ 127 (362)
+.-+|+|+|.|.|. +...||.+ | .++|||+.+
T Consensus 22 ~~~~vLD~GCG~G~----~~~~la~~--g---~~V~gvD~S 53 (203)
T 1pjz_A 22 PGARVLVPLCGKSQ----DMSWLSGQ--G---YHVVGAELS 53 (203)
T ss_dssp TTCEEEETTTCCSH----HHHHHHHH--C---CEEEEEEEC
T ss_pred CCCEEEEeCCCCcH----hHHHHHHC--C---CeEEEEeCC
Confidence 44589999999884 45557765 2 379999975
No 98
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=61.68 E-value=32 Score=31.49 Aligned_cols=42 Identities=17% Similarity=0.147 Sum_probs=31.2
Q ss_pred HHHHhhhcCCCeeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccCC
Q 035867 77 GAIMEAFEGESKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTSK 128 (362)
Q Consensus 77 qaIleA~~g~~~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~~ 128 (362)
+.|++++.-... +|+|+|-|.|. |-..|+.+. -++|||+.+.
T Consensus 37 ~~Iv~~~~~~~~-~VLEIG~G~G~----lt~~L~~~~-----~~V~avEid~ 78 (271)
T 3fut_A 37 RRIVEAARPFTG-PVFEVGPGLGA----LTRALLEAG-----AEVTAIEKDL 78 (271)
T ss_dssp HHHHHHHCCCCS-CEEEECCTTSH----HHHHHHHTT-----CCEEEEESCG
T ss_pred HHHHHhcCCCCC-eEEEEeCchHH----HHHHHHHcC-----CEEEEEECCH
Confidence 456666665556 99999999884 777788773 2699998764
No 99
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=60.85 E-value=73 Score=26.62 Aligned_cols=44 Identities=11% Similarity=0.142 Sum_probs=30.1
Q ss_pred HHHHhhhcCCCeeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccC
Q 035867 77 GAIMEAFEGESKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTS 127 (362)
Q Consensus 77 qaIleA~~g~~~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~ 127 (362)
..+++.+.-...-.|+|+|.|.|. +...|+.+. |..++|+|+.+
T Consensus 30 ~~~l~~l~~~~~~~vLDiG~G~G~----~~~~la~~~---~~~~v~~vD~s 73 (204)
T 3e05_A 30 AVTLSKLRLQDDLVMWDIGAGSAS----VSIEASNLM---PNGRIFALERN 73 (204)
T ss_dssp HHHHHHTTCCTTCEEEEETCTTCH----HHHHHHHHC---TTSEEEEEECC
T ss_pred HHHHHHcCCCCCCEEEEECCCCCH----HHHHHHHHC---CCCEEEEEeCC
Confidence 456666665566789999999885 334445442 45689999864
No 100
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=60.59 E-value=72 Score=26.45 Aligned_cols=98 Identities=16% Similarity=0.142 Sum_probs=51.8
Q ss_pred EEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCcEEEEEee
Q 035867 90 HIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTSKPVGGSGAGGLAAVQKVMKEIGNRMEKFARLMGVPFEFNVIH 169 (362)
Q Consensus 90 HIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~~~~~~~~~~~~~~~~~~l~etg~rL~~fA~~~gvpfeF~~v~ 169 (362)
.|+|+|.|.|. +...|+.+ + .++|||+.+. ..++.+.+++ +..|+..+|..
T Consensus 32 ~vLdiGcG~G~----~~~~l~~~--~---~~v~~vD~s~--------------~~~~~a~~~~----~~~~~~~~~~~-- 82 (202)
T 2kw5_A 32 KILCLAEGEGR----NACFLASL--G---YEVTAVDQSS--------------VGLAKAKQLA----QEKGVKITTVQ-- 82 (202)
T ss_dssp EEEECCCSCTH----HHHHHHTT--T---CEEEEECSSH--------------HHHHHHHHHH----HHHTCCEEEEC--
T ss_pred CEEEECCCCCH----hHHHHHhC--C---CeEEEEECCH--------------HHHHHHHHHH----HhcCCceEEEE--
Confidence 89999998875 45666665 2 3899998642 2343333332 33455555532
Q ss_pred ccCCcccCccccccccCCCeEEEeccccccccccccCcHHHHHHHH-HhcCCcEEEEEc
Q 035867 170 HVGDLCDLNLAELDVRSDEALAINCIGALHTIAAVDDRRDVLISNL-RSLQPRIITVVE 227 (362)
Q Consensus 170 ~~~~~e~l~~~~l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~vvvlvE 227 (362)
.++.++.. .-..=+.|+.+ + .|+. ......+|+.+ +.|+|.-.+++.
T Consensus 83 --~d~~~~~~---~~~~fD~v~~~--~--~~~~--~~~~~~~l~~~~~~L~pgG~l~~~ 130 (202)
T 2kw5_A 83 --SNLADFDI---VADAWEGIVSI--F--CHLP--SSLRQQLYPKVYQGLKPGGVFILE 130 (202)
T ss_dssp --CBTTTBSC---CTTTCSEEEEE--C--CCCC--HHHHHHHHHHHHTTCCSSEEEEEE
T ss_pred --cChhhcCC---CcCCccEEEEE--h--hcCC--HHHHHHHHHHHHHhcCCCcEEEEE
Confidence 24444321 11112344432 2 2331 12345566555 667998777653
No 101
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=60.54 E-value=28 Score=29.72 Aligned_cols=102 Identities=11% Similarity=0.027 Sum_probs=53.7
Q ss_pred eEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHcCC-cEEEEE
Q 035867 89 LHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTSKPVGGSGAGGLAAVQKVMKEIGNRMEKFARLMGV-PFEFNV 167 (362)
Q Consensus 89 VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~~~~~~~~~~~~~~~~~~l~etg~rL~~fA~~~gv-pfeF~~ 167 (362)
-+|+|+|.|.|. +...++.+. . -++|||+.+. ..++.+.++ ++..|+ ..+|
T Consensus 56 ~~vLDlgcG~G~----~~~~l~~~~--~--~~V~~vD~s~--------------~~l~~a~~~----~~~~~~~~v~~-- 107 (202)
T 2fpo_A 56 AQCLDCFAGSGA----LGLEALSRY--A--AGATLIEMDR--------------AVSQQLIKN----LATLKAGNARV-- 107 (202)
T ss_dssp CEEEETTCTTCH----HHHHHHHTT--C--SEEEEECSCH--------------HHHHHHHHH----HHHTTCCSEEE--
T ss_pred CeEEEeCCCcCH----HHHHHHhcC--C--CEEEEEECCH--------------HHHHHHHHH----HHHcCCCcEEE--
Confidence 479999999886 222223332 1 2799998653 234444333 344565 4444
Q ss_pred eeccCCcccCccccccccCCCeEEEeccccccccccccCcHHHHHHHHHh---cCCcEEEEEccc
Q 035867 168 IHHVGDLCDLNLAELDVRSDEALAINCIGALHTIAAVDDRRDVLISNLRS---LQPRIITVVEEE 229 (362)
Q Consensus 168 v~~~~~~e~l~~~~l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~ir~---L~P~vvvlvE~e 229 (362)
+. .++.+..+. .-..=+.|++|..| | . ...+.+++.+.+ |+|.-+++++..
T Consensus 108 ~~--~D~~~~~~~--~~~~fD~V~~~~p~--~-~----~~~~~~l~~l~~~~~L~pgG~l~i~~~ 161 (202)
T 2fpo_A 108 VN--SNAMSFLAQ--KGTPHNIVFVDPPF--R-R----GLLEETINLLEDNGWLADEALIYVESE 161 (202)
T ss_dssp EC--SCHHHHHSS--CCCCEEEEEECCSS--S-T----TTHHHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred EE--CCHHHHHhh--cCCCCCEEEECCCC--C-C----CcHHHHHHHHHhcCccCCCcEEEEEEC
Confidence 31 344332111 00111356666554 2 1 234567777766 999987776543
No 102
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=60.44 E-value=34 Score=28.67 Aligned_cols=96 Identities=7% Similarity=-0.040 Sum_probs=51.7
Q ss_pred eEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCc-EEEEE
Q 035867 89 LHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTSKPVGGSGAGGLAAVQKVMKEIGNRMEKFARLMGVP-FEFNV 167 (362)
Q Consensus 89 VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~~~~~~~~~~~~~~~~~~l~etg~rL~~fA~~~gvp-feF~~ 167 (362)
-+|+|+|.|.|.--..|.+.+ |..++|+|+.+. ..++.+. +.++..|++ .+|..
T Consensus 67 ~~vLDiG~G~G~~~~~l~~~~-------~~~~v~~vD~s~--------------~~~~~a~----~~~~~~~~~~v~~~~ 121 (207)
T 1jsx_A 67 ERFIDVGTGPGLPGIPLSIVR-------PEAHFTLLDSLG--------------KRVRFLR----QVQHELKLENIEPVQ 121 (207)
T ss_dssp SEEEEETCTTTTTHHHHHHHC-------TTSEEEEEESCH--------------HHHHHHH----HHHHHTTCSSEEEEE
T ss_pred CeEEEECCCCCHHHHHHHHHC-------CCCEEEEEeCCH--------------HHHHHHH----HHHHHcCCCCeEEEe
Confidence 489999999997544444332 346899998642 2233332 334456665 55533
Q ss_pred eeccCCcccCccccccccCCCeEEEeccccccccccccCcHHHHHHHH-HhcCCcEEEEEc
Q 035867 168 IHHVGDLCDLNLAELDVRSDEALAINCIGALHTIAAVDDRRDVLISNL-RSLQPRIITVVE 227 (362)
Q Consensus 168 v~~~~~~e~l~~~~l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~vvvlvE 227 (362)
.+++++.+. ..=+.++.|. + .....+++.+ +.|+|.-.++++
T Consensus 122 ----~d~~~~~~~----~~~D~i~~~~---~-------~~~~~~l~~~~~~L~~gG~l~~~ 164 (207)
T 1jsx_A 122 ----SRVEEFPSE----PPFDGVISRA---F-------ASLNDMVSWCHHLPGEQGRFYAL 164 (207)
T ss_dssp ----CCTTTSCCC----SCEEEEECSC---S-------SSHHHHHHHHTTSEEEEEEEEEE
T ss_pred ----cchhhCCcc----CCcCEEEEec---c-------CCHHHHHHHHHHhcCCCcEEEEE
Confidence 245443211 1112333221 1 2244566655 557998887765
No 103
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=59.61 E-value=17 Score=33.16 Aligned_cols=42 Identities=14% Similarity=-0.061 Sum_probs=29.8
Q ss_pred HHHHhhhcCCCeeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccC
Q 035867 77 GAIMEAFEGESKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTS 127 (362)
Q Consensus 77 qaIleA~~g~~~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~ 127 (362)
..|++.+.-...-+|+|+|.|.|. +-..|+.+ + -++|||+.+
T Consensus 35 ~~il~~l~l~~g~~VLDlGcGtG~----~a~~La~~-g----~~V~gvD~S 76 (261)
T 3iv6_A 35 ENDIFLENIVPGSTVAVIGASTRF----LIEKALER-G----ASVTVFDFS 76 (261)
T ss_dssp HHHHHTTTCCTTCEEEEECTTCHH----HHHHHHHT-T----CEEEEEESC
T ss_pred HHHHHhcCCCCcCEEEEEeCcchH----HHHHHHhc-C----CEEEEEECC
Confidence 446666665556689999999885 55566665 2 379999865
No 104
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=59.22 E-value=55 Score=31.38 Aligned_cols=117 Identities=15% Similarity=0.103 Sum_probs=63.7
Q ss_pred HHHHHHhhhc------CCCeeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccCCCCCCCCCCCchhHHHHHHHH
Q 035867 75 CNGAIMEAFE------GESKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTSKPVGGSGAGGLAAVQKVMKEI 148 (362)
Q Consensus 75 aNqaIleA~~------g~~~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~~~~~~~~~~~~~~~~~~l~et 148 (362)
..+.+++.+. ..+.-+|+|+|.|.|. +...|+.+ + .++|+|+.+. ..++.+
T Consensus 215 ~t~~ll~~l~~~l~~~~~~~~~VLDlGcG~G~----~~~~la~~--g---~~V~gvDis~--------------~al~~A 271 (381)
T 3dmg_A 215 ASLLLLEALQERLGPEGVRGRQVLDLGAGYGA----LTLPLARM--G---AEVVGVEDDL--------------ASVLSL 271 (381)
T ss_dssp HHHHHHHHHHHHHCTTTTTTCEEEEETCTTST----THHHHHHT--T---CEEEEEESBH--------------HHHHHH
T ss_pred HHHHHHHHHHHhhcccCCCCCEEEEEeeeCCH----HHHHHHHc--C---CEEEEEECCH--------------HHHHHH
Confidence 3455566553 2244589999999996 34445554 2 3899998642 234444
Q ss_pred HHHHHHHHHHcCCcEEEEEeeccCCcccCccccccccCCCeEEEeccccccccccc-cCcHHHHHH-HHHhcCCcEEEEE
Q 035867 149 GNRMEKFARLMGVPFEFNVIHHVGDLCDLNLAELDVRSDEALAINCIGALHTIAAV-DDRRDVLIS-NLRSLQPRIITVV 226 (362)
Q Consensus 149 g~rL~~fA~~~gvpfeF~~v~~~~~~e~l~~~~l~~~~~E~laVN~~~~Lh~l~~~-~~~~~~~L~-~ir~L~P~vvvlv 226 (362)
.++ ++..|+..+|.. .++.+.... -..=+.|+.|..+ |+.... ......+++ ..+.|+|.-.+++
T Consensus 272 ~~n----~~~~~~~v~~~~----~D~~~~~~~---~~~fD~Ii~npp~--~~~~~~~~~~~~~~l~~~~~~LkpGG~l~i 338 (381)
T 3dmg_A 272 QKG----LEANALKAQALH----SDVDEALTE---EARFDIIVTNPPF--HVGGAVILDVAQAFVNVAAARLRPGGVFFL 338 (381)
T ss_dssp HHH----HHHTTCCCEEEE----CSTTTTSCT---TCCEEEEEECCCC--CTTCSSCCHHHHHHHHHHHHHEEEEEEEEE
T ss_pred HHH----HHHcCCCeEEEE----cchhhcccc---CCCeEEEEECCch--hhcccccHHHHHHHHHHHHHhcCcCcEEEE
Confidence 333 345677766633 244443221 0122466666665 542211 123445555 5577899887776
Q ss_pred c
Q 035867 227 E 227 (362)
Q Consensus 227 E 227 (362)
.
T Consensus 339 v 339 (381)
T 3dmg_A 339 V 339 (381)
T ss_dssp E
T ss_pred E
Confidence 4
No 105
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=58.18 E-value=71 Score=29.56 Aligned_cols=113 Identities=13% Similarity=0.109 Sum_probs=59.4
Q ss_pred HHHHhhhcCCCeeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccCCCCCCCCCCCchhHHHHHHHHHHHHHHHH
Q 035867 77 GAIMEAFEGESKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTSKPVGGSGAGGLAAVQKVMKEIGNRMEKFA 156 (362)
Q Consensus 77 qaIleA~~g~~~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~~~~~~~~~~~~~~~~~~l~etg~rL~~fA 156 (362)
++|++...-.+.-+|+|+|-|.|. +...++.++ .-+++||+.+ + .++.+. +.+
T Consensus 28 ~ai~~~~~~~~~~~VLDiGcGtG~----ls~~la~~g----~~~v~~vD~s-~--------------~~~~a~----~~~ 80 (328)
T 1g6q_1 28 NAIIQNKDLFKDKIVLDVGCGTGI----LSMFAAKHG----AKHVIGVDMS-S--------------IIEMAK----ELV 80 (328)
T ss_dssp HHHHHHHHHHTTCEEEEETCTTSH----HHHHHHHTC----CSEEEEEESS-T--------------HHHHHH----HHH
T ss_pred HHHHhhHhhcCCCEEEEecCccHH----HHHHHHHCC----CCEEEEEChH-H--------------HHHHHH----HHH
Confidence 345444433334489999999984 444566552 2489999865 2 122222 223
Q ss_pred HHcCCc--EEEEEeeccCCcccCccccccccCCCeEEEeccccccccccccCcHHHHHHHH-HhcCCcEEEEE
Q 035867 157 RLMGVP--FEFNVIHHVGDLCDLNLAELDVRSDEALAINCIGALHTIAAVDDRRDVLISNL-RSLQPRIITVV 226 (362)
Q Consensus 157 ~~~gvp--feF~~v~~~~~~e~l~~~~l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~vvvlv 226 (362)
+..|++ .+| +. .+++++... ...=+.++.+.+ .+.+.. ....+.+|..+ +-|+|.-.++.
T Consensus 81 ~~~~~~~~i~~--~~--~d~~~~~~~---~~~~D~Ivs~~~--~~~l~~-~~~~~~~l~~~~~~LkpgG~li~ 143 (328)
T 1g6q_1 81 ELNGFSDKITL--LR--GKLEDVHLP---FPKVDIIISEWM--GYFLLY-ESMMDTVLYARDHYLVEGGLIFP 143 (328)
T ss_dssp HHTTCTTTEEE--EE--SCTTTSCCS---SSCEEEEEECCC--BTTBST-TCCHHHHHHHHHHHEEEEEEEES
T ss_pred HHcCCCCCEEE--EE--CchhhccCC---CCcccEEEEeCc--hhhccc-HHHHHHHHHHHHhhcCCCeEEEE
Confidence 445654 444 32 355554321 111134444433 233322 23456677765 67899988774
No 106
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=57.56 E-value=45 Score=27.71 Aligned_cols=108 Identities=15% Similarity=0.069 Sum_probs=53.2
Q ss_pred eEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHcCC--cEEEE
Q 035867 89 LHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTSKPVGGSGAGGLAAVQKVMKEIGNRMEKFARLMGV--PFEFN 166 (362)
Q Consensus 89 VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~~~~~~~~~~~~~~~~~~l~etg~rL~~fA~~~gv--pfeF~ 166 (362)
-.|+|+|.|.|. +...|+.+-+ |.-++|||+.+. ..++.+.++ ++..|+ .++|
T Consensus 24 ~~vLDlGcG~G~----~~~~l~~~~~--~~~~v~~vD~s~--------------~~~~~a~~~----~~~~~~~~~v~~- 78 (197)
T 3eey_A 24 DTVVDATCGNGN----DTAFLASLVG--ENGRVFGFDIQD--------------KAIANTTKK----LTDLNLIDRVTL- 78 (197)
T ss_dssp CEEEESCCTTSH----HHHHHHHHHC--TTCEEEEECSCH--------------HHHHHHHHH----HHHTTCGGGEEE-
T ss_pred CEEEEcCCCCCH----HHHHHHHHhC--CCCEEEEEECCH--------------HHHHHHHHH----HHHcCCCCCeEE-
Confidence 379999999884 3444444421 223899998642 234444333 344566 3554
Q ss_pred EeeccCCcccCccccccccCCCeEEEecccc---ccccccccCcHHHHHH-HHHhcCCcEEEEE
Q 035867 167 VIHHVGDLCDLNLAELDVRSDEALAINCIGA---LHTIAAVDDRRDVLIS-NLRSLQPRIITVV 226 (362)
Q Consensus 167 ~v~~~~~~e~l~~~~l~~~~~E~laVN~~~~---Lh~l~~~~~~~~~~L~-~ir~L~P~vvvlv 226 (362)
+. .+.+++.. .+. ..=+.++.|..+. -|+..........+|+ ..+.|+|.-.+++
T Consensus 79 -~~--~d~~~~~~-~~~-~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~ 137 (197)
T 3eey_A 79 -IK--DGHQNMDK-YID-CPVKAVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITV 137 (197)
T ss_dssp -EC--SCGGGGGG-TCC-SCEEEEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred -EE--CCHHHHhh-hcc-CCceEEEEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEE
Confidence 32 34444421 011 1224666666541 1111111111223454 5567899866654
No 107
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=57.48 E-value=25 Score=35.02 Aligned_cols=113 Identities=12% Similarity=0.090 Sum_probs=62.7
Q ss_pred HHHHhhhcCCCeeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccCCCCCCCCCCCchhHHHHHHHHHHHHHHHH
Q 035867 77 GAIMEAFEGESKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTSKPVGGSGAGGLAAVQKVMKEIGNRMEKFA 156 (362)
Q Consensus 77 qaIleA~~g~~~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~~~~~~~~~~~~~~~~~~l~etg~rL~~fA 156 (362)
.+|++.+...+.-+|+|+|.|.|. +...++.+ +..++|||+.+ . .++.+ .+.+
T Consensus 148 ~~il~~l~~~~~~~VLDiGcGtG~----la~~la~~----~~~~V~gvD~s--------------~-~l~~A----~~~~ 200 (480)
T 3b3j_A 148 RAILQNHTDFKDKIVLDVGCGSGI----LSFFAAQA----GARKIYAVEAS--------------T-MAQHA----EVLV 200 (480)
T ss_dssp HHHHHTGGGTTTCEEEEESCSTTH----HHHHHHHT----TCSEEEEEECH--------------H-HHHHH----HHHH
T ss_pred HHHHHhhhhcCCCEEEEecCcccH----HHHHHHHc----CCCEEEEEEcH--------------H-HHHHH----HHHH
Confidence 456776655455699999999885 44566664 33589999853 1 23222 2334
Q ss_pred HHcCCc--EEEEEeeccCCcccCccccccccCCCeEEEeccccccccccccCcHHHHHHHHHhcCCcEEEEEc
Q 035867 157 RLMGVP--FEFNVIHHVGDLCDLNLAELDVRSDEALAINCIGALHTIAAVDDRRDVLISNLRSLQPRIITVVE 227 (362)
Q Consensus 157 ~~~gvp--feF~~v~~~~~~e~l~~~~l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~ir~L~P~vvvlvE 227 (362)
+..|+. .+| +. .+++++... ..=+.++.|.+ ++++.. .+..+.+...-+-|+|.-.++.+
T Consensus 201 ~~~gl~~~v~~--~~--~d~~~~~~~----~~fD~Ivs~~~--~~~~~~-e~~~~~l~~~~~~LkpgG~li~~ 262 (480)
T 3b3j_A 201 KSNNLTDRIVV--IP--GKVEEVSLP----EQVDIIISEPM--GYMLFN-ERMLESYLHAKKYLKPSGNMFPT 262 (480)
T ss_dssp HHTTCTTTEEE--EE--SCTTTCCCS----SCEEEEECCCC--HHHHTC-HHHHHHHHHGGGGEEEEEEEESC
T ss_pred HHcCCCCcEEE--EE--CchhhCccC----CCeEEEEEeCc--hHhcCc-HHHHHHHHHHHHhcCCCCEEEEE
Confidence 455663 555 32 355554221 11134443333 355532 22344455556788999888854
No 108
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=56.94 E-value=71 Score=29.01 Aligned_cols=109 Identities=17% Similarity=0.064 Sum_probs=58.8
Q ss_pred eeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCc--EEE
Q 035867 88 KLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTSKPVGGSGAGGLAAVQKVMKEIGNRMEKFARLMGVP--FEF 165 (362)
Q Consensus 88 ~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~~~~~~~~~~~~~~~~~~l~etg~rL~~fA~~~gvp--feF 165 (362)
.-.|+|+|.|.|. +.-.|+.+ |..++|||+.+. ..++.+.++ ++..|+. .+|
T Consensus 124 ~~~vLDlG~GsG~----~~~~la~~----~~~~v~~vDis~--------------~al~~A~~n----~~~~~l~~~v~~ 177 (284)
T 1nv8_A 124 IKTVADIGTGSGA----IGVSVAKF----SDAIVFATDVSS--------------KAVEIARKN----AERHGVSDRFFV 177 (284)
T ss_dssp CCEEEEESCTTSH----HHHHHHHH----SSCEEEEEESCH--------------HHHHHHHHH----HHHTTCTTSEEE
T ss_pred CCEEEEEeCchhH----HHHHHHHC----CCCEEEEEECCH--------------HHHHHHHHH----HHHcCCCCceEE
Confidence 3479999999985 44555554 457899998653 234433333 4456775 666
Q ss_pred EEeeccCCcccCccccccccCCCeEEEeccccc----------cc----cccccCcHHHHHHHH-HhcCCcEEEEEcc
Q 035867 166 NVIHHVGDLCDLNLAELDVRSDEALAINCIGAL----------HT----IAAVDDRRDVLISNL-RSLQPRIITVVEE 228 (362)
Q Consensus 166 ~~v~~~~~~e~l~~~~l~~~~~E~laVN~~~~L----------h~----l~~~~~~~~~~L~~i-r~L~P~vvvlvE~ 228 (362)
.. .++.+..... ..+-+.++.|-.+.- |. +....+..+.+-+.+ +.++|.-++++|-
T Consensus 178 ~~----~D~~~~~~~~--f~~~D~IvsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e~ 249 (284)
T 1nv8_A 178 RK----GEFLEPFKEK--FASIEMILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLMEI 249 (284)
T ss_dssp EE----SSTTGGGGGG--TTTCCEEEECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEEC
T ss_pred EE----Ccchhhcccc--cCCCCEEEEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEEE
Confidence 33 2444321111 111157777743321 10 001122334444556 7889998888864
No 109
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=56.29 E-value=74 Score=27.37 Aligned_cols=115 Identities=12% Similarity=0.080 Sum_probs=60.6
Q ss_pred HHHHHHhhhcCC-----CeeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccCCCCCCCCCCCchhHHHHHHHHH
Q 035867 75 CNGAIMEAFEGE-----SKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTSKPVGGSGAGGLAAVQKVMKEIG 149 (362)
Q Consensus 75 aNqaIleA~~g~-----~~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~~~~~~~~~~~~~~~~~~l~etg 149 (362)
....+++.+... +.-.|+|+|.|.|. +...|+.+. ..++|||+.+. ..++.+.
T Consensus 62 ~~~~~~~~l~~~~~~~~~~~~vLDiGcG~G~----~~~~l~~~~----~~~v~~vD~s~--------------~~~~~a~ 119 (241)
T 2ex4_A 62 SSRKFLQRFLREGPNKTGTSCALDCGAGIGR----ITKRLLLPL----FREVDMVDITE--------------DFLVQAK 119 (241)
T ss_dssp HHHHHHHGGGC----CCCCSEEEEETCTTTH----HHHHTTTTT----CSEEEEEESCH--------------HHHHHHH
T ss_pred hHHHHHHHHHHhcccCCCCCEEEEECCCCCH----HHHHHHHhc----CCEEEEEeCCH--------------HHHHHHH
Confidence 344555555322 35689999999885 555666553 24799998642 2344333
Q ss_pred HHHHHHHHHc-CCcEEEEEeeccCCcccCccccccccCCCeEEEeccccccccccccCcHHHHHHHH-HhcCCcEEEEE
Q 035867 150 NRMEKFARLM-GVPFEFNVIHHVGDLCDLNLAELDVRSDEALAINCIGALHTIAAVDDRRDVLISNL-RSLQPRIITVV 226 (362)
Q Consensus 150 ~rL~~fA~~~-gvpfeF~~v~~~~~~e~l~~~~l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~vvvlv 226 (362)
+++ ... +...+|.. .++.++.. .++..=+|-|...|||+.. ..+..+|+.+ +.|+|.-.+++
T Consensus 120 ~~~----~~~~~~~~~~~~----~d~~~~~~-----~~~~fD~v~~~~~l~~~~~--~~~~~~l~~~~~~LkpgG~l~i 183 (241)
T 2ex4_A 120 TYL----GEEGKRVRNYFC----CGLQDFTP-----EPDSYDVIWIQWVIGHLTD--QHLAEFLRRCKGSLRPNGIIVI 183 (241)
T ss_dssp HHT----GGGGGGEEEEEE----CCGGGCCC-----CSSCEEEEEEESCGGGSCH--HHHHHHHHHHHHHEEEEEEEEE
T ss_pred HHh----hhcCCceEEEEE----cChhhcCC-----CCCCEEEEEEcchhhhCCH--HHHHHHHHHHHHhcCCCeEEEE
Confidence 332 222 22344432 24444322 2222222334456788852 2244566554 66899876664
No 110
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=56.26 E-value=88 Score=26.13 Aligned_cols=42 Identities=14% Similarity=0.208 Sum_probs=30.3
Q ss_pred HHHHHhhhcCCCeeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccC
Q 035867 76 NGAIMEAFEGESKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTS 127 (362)
Q Consensus 76 NqaIleA~~g~~~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~ 127 (362)
.+.|++.+. .+.-+|+|+|.|.| .+...|+.+ + .++|||+.+
T Consensus 22 ~~~l~~~~~-~~~~~vLdiG~G~G----~~~~~l~~~-~----~~~~~~D~~ 63 (230)
T 3cc8_A 22 NPNLLKHIK-KEWKEVLDIGCSSG----ALGAAIKEN-G----TRVSGIEAF 63 (230)
T ss_dssp CHHHHTTCC-TTCSEEEEETCTTS----HHHHHHHTT-T----CEEEEEESS
T ss_pred HHHHHHHhc-cCCCcEEEeCCCCC----HHHHHHHhc-C----CeEEEEeCC
Confidence 355666665 55668999999988 466677776 2 589999864
No 111
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=56.23 E-value=40 Score=28.63 Aligned_cols=102 Identities=16% Similarity=0.075 Sum_probs=53.8
Q ss_pred eEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHcCC---cEEE
Q 035867 89 LHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTSKPVGGSGAGGLAAVQKVMKEIGNRMEKFARLMGV---PFEF 165 (362)
Q Consensus 89 VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~~~~~~~~~~~~~~~~~~l~etg~rL~~fA~~~gv---pfeF 165 (362)
-.|+|+|.|.|. +...++.+. . -++|||+.+. ..++.+.++ ++..|+ ..+|
T Consensus 55 ~~vLDlGcGtG~----~~~~~~~~~--~--~~v~gvD~s~--------------~~l~~a~~~----~~~~~~~~~~v~~ 108 (201)
T 2ift_A 55 SECLDGFAGSGS----LGFEALSRQ--A--KKVTFLELDK--------------TVANQLKKN----LQTLKCSSEQAEV 108 (201)
T ss_dssp CEEEETTCTTCH----HHHHHHHTT--C--SEEEEECSCH--------------HHHHHHHHH----HHHTTCCTTTEEE
T ss_pred CeEEEcCCccCH----HHHHHHHcc--C--CEEEEEECCH--------------HHHHHHHHH----HHHhCCCccceEE
Confidence 379999999885 222233332 1 3799998653 234444333 344565 4555
Q ss_pred EEeeccCCcccCccccccccC-CCeEEEeccccccccccccCcHHHHHHHHHh---cCCcEEEEEcc
Q 035867 166 NVIHHVGDLCDLNLAELDVRS-DEALAINCIGALHTIAAVDDRRDVLISNLRS---LQPRIITVVEE 228 (362)
Q Consensus 166 ~~v~~~~~~e~l~~~~l~~~~-~E~laVN~~~~Lh~l~~~~~~~~~~L~~ir~---L~P~vvvlvE~ 228 (362)
.. .+..++... +.-.. =+.|+.|..+ | . ...+.+++.+.+ |+|.-+++++.
T Consensus 109 ~~----~d~~~~~~~-~~~~~~fD~I~~~~~~--~-~----~~~~~~l~~~~~~~~LkpgG~l~i~~ 163 (201)
T 2ift_A 109 IN----QSSLDFLKQ-PQNQPHFDVVFLDPPF--H-F----NLAEQAISLLCENNWLKPNALIYVET 163 (201)
T ss_dssp EC----SCHHHHTTS-CCSSCCEEEEEECCCS--S-S----CHHHHHHHHHHHTTCEEEEEEEEEEE
T ss_pred EE----CCHHHHHHh-hccCCCCCEEEECCCC--C-C----ccHHHHHHHHHhcCccCCCcEEEEEE
Confidence 22 233332111 00011 1355555553 3 1 235667888765 99998777654
No 112
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=55.93 E-value=89 Score=26.07 Aligned_cols=101 Identities=13% Similarity=0.063 Sum_probs=52.0
Q ss_pred HHhhhcCCCeeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHH
Q 035867 79 IMEAFEGESKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTSKPVGGSGAGGLAAVQKVMKEIGNRMEKFARL 158 (362)
Q Consensus 79 IleA~~g~~~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~~~~~~~~~~~~~~~~~~l~etg~rL~~fA~~ 158 (362)
+++.+.. +.-.|+|+|.|.|. +...| +. -++|||+.+. ..++.+.+++
T Consensus 29 ~l~~~~~-~~~~vLdiG~G~G~----~~~~l----~~---~~v~~vD~s~--------------~~~~~a~~~~------ 76 (211)
T 2gs9_A 29 ALKGLLP-PGESLLEVGAGTGY----WLRRL----PY---PQKVGVEPSE--------------AMLAVGRRRA------ 76 (211)
T ss_dssp HHHTTCC-CCSEEEEETCTTCH----HHHHC----CC---SEEEEECCCH--------------HHHHHHHHHC------
T ss_pred HHHHhcC-CCCeEEEECCCCCH----hHHhC----CC---CeEEEEeCCH--------------HHHHHHHHhC------
Confidence 4444433 45589999999884 33334 11 2799998542 2333333322
Q ss_pred cCCcEEEEEeeccCCcccCccccccccCCCeEEEeccccccccccccCcHHHHHHH-HHhcCCcEEEEE
Q 035867 159 MGVPFEFNVIHHVGDLCDLNLAELDVRSDEALAINCIGALHTIAAVDDRRDVLISN-LRSLQPRIITVV 226 (362)
Q Consensus 159 ~gvpfeF~~v~~~~~~e~l~~~~l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~-ir~L~P~vvvlv 226 (362)
-..+| + ..+++++. ..++..=+|-|...+||+. + ...+|+. .+-|+|.-.+++
T Consensus 77 --~~~~~--~--~~d~~~~~-----~~~~~fD~v~~~~~l~~~~---~-~~~~l~~~~~~L~pgG~l~i 130 (211)
T 2gs9_A 77 --PEATW--V--RAWGEALP-----FPGESFDVVLLFTTLEFVE---D-VERVLLEARRVLRPGGALVV 130 (211)
T ss_dssp --TTSEE--E--CCCTTSCC-----SCSSCEEEEEEESCTTTCS---C-HHHHHHHHHHHEEEEEEEEE
T ss_pred --CCcEE--E--EcccccCC-----CCCCcEEEEEEcChhhhcC---C-HHHHHHHHHHHcCCCCEEEE
Confidence 22333 2 13444432 2233222333445678884 3 3455554 567799866654
No 113
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=55.76 E-value=1.2e+02 Score=29.37 Aligned_cols=108 Identities=15% Similarity=0.138 Sum_probs=60.1
Q ss_pred HHhhhcCCCeeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHH
Q 035867 79 IMEAFEGESKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTSKPVGGSGAGGLAAVQKVMKEIGNRMEKFARL 158 (362)
Q Consensus 79 IleA~~g~~~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~~~~~~~~~~~~~~~~~~l~etg~rL~~fA~~ 158 (362)
+++.+.....-.|+|+|.|.|. +...||.+ .-+++||+.+. ..++.+.++ |+.
T Consensus 278 ~~~~l~~~~~~~VLDlgcG~G~----~~~~la~~-----~~~V~gvD~s~--------------~al~~A~~n----~~~ 330 (433)
T 1uwv_A 278 ALEWLDVQPEDRVLDLFCGMGN----FTLPLATQ-----AASVVGVEGVP--------------ALVEKGQQN----ARL 330 (433)
T ss_dssp HHHHHTCCTTCEEEEESCTTTT----THHHHHTT-----SSEEEEEESCH--------------HHHHHHHHH----HHH
T ss_pred HHHhhcCCCCCEEEECCCCCCH----HHHHHHhh-----CCEEEEEeCCH--------------HHHHHHHHH----HHH
Confidence 3444443334479999999986 33445655 24799998653 234443333 445
Q ss_pred cCCc-EEEEEeeccCCcccCccc-cccccCCCeEEEeccccccccccccCcHHHHHHHHHhcCCcEEEEE
Q 035867 159 MGVP-FEFNVIHHVGDLCDLNLA-ELDVRSDEALAINCIGALHTIAAVDDRRDVLISNLRSLQPRIITVV 226 (362)
Q Consensus 159 ~gvp-feF~~v~~~~~~e~l~~~-~l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~ir~L~P~vvvlv 226 (362)
.|++ .+|.. .++++.-.. .+.-..=+.|++|-.. ...+.+++.+..++|+-++.+
T Consensus 331 ~~~~~v~f~~----~d~~~~l~~~~~~~~~fD~Vv~dPPr---------~g~~~~~~~l~~~~p~~ivyv 387 (433)
T 1uwv_A 331 NGLQNVTFYH----ENLEEDVTKQPWAKNGFDKVLLDPAR---------AGAAGVMQQIIKLEPIRIVYV 387 (433)
T ss_dssp TTCCSEEEEE----CCTTSCCSSSGGGTTCCSEEEECCCT---------TCCHHHHHHHHHHCCSEEEEE
T ss_pred cCCCceEEEE----CCHHHHhhhhhhhcCCCCEEEECCCC---------ccHHHHHHHHHhcCCCeEEEE
Confidence 6764 55533 344442111 0111122466665432 112468889999999998876
No 114
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=54.96 E-value=96 Score=26.17 Aligned_cols=109 Identities=13% Similarity=0.108 Sum_probs=56.3
Q ss_pred CeeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHcCC-cEEE
Q 035867 87 SKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTSKPVGGSGAGGLAAVQKVMKEIGNRMEKFARLMGV-PFEF 165 (362)
Q Consensus 87 ~~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~~~~~~~~~~~~~~~~~~l~etg~rL~~fA~~~gv-pfeF 165 (362)
+.-.|+|+|.|.|. +...||.+. |..++|||+.+. ..++.+.++ ++..|+ ..+|
T Consensus 41 ~~~~vLDiGcG~G~----~~~~la~~~---p~~~v~gvD~s~--------------~~l~~a~~~----~~~~~~~~v~~ 95 (214)
T 1yzh_A 41 DNPIHVEVGSGKGA----FVSGMAKQN---PDINYIGIDIQK--------------SVLSYALDK----VLEVGVPNIKL 95 (214)
T ss_dssp CCCEEEEESCTTSH----HHHHHHHHC---TTSEEEEEESCH--------------HHHHHHHHH----HHHHCCSSEEE
T ss_pred CCCeEEEEccCcCH----HHHHHHHHC---CCCCEEEEEcCH--------------HHHHHHHHH----HHHcCCCCEEE
Confidence 34469999999885 444555542 456899998653 234333333 334565 3555
Q ss_pred EEeeccCCcccCccccccccCCCeEEEeccccccccccccC----cHHHHHHHH-HhcCCcEEEEEc
Q 035867 166 NVIHHVGDLCDLNLAELDVRSDEALAINCIGALHTIAAVDD----RRDVLISNL-RSLQPRIITVVE 227 (362)
Q Consensus 166 ~~v~~~~~~e~l~~~~l~~~~~E~laVN~~~~Lh~l~~~~~----~~~~~L~~i-r~L~P~vvvlvE 227 (362)
.. .++.++.. .+.-..=+.|++|... +....... ....+|+.+ +.|+|.-+++++
T Consensus 96 ~~----~d~~~~~~-~~~~~~~D~i~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 155 (214)
T 1yzh_A 96 LW----VDGSDLTD-YFEDGEIDRLYLNFSD--PWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFK 155 (214)
T ss_dssp EE----CCSSCGGG-TSCTTCCSEEEEESCC--CCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEE
T ss_pred Ee----CCHHHHHh-hcCCCCCCEEEEECCC--CccccchhhhccCCHHHHHHHHHHcCCCcEEEEE
Confidence 32 34444321 1111112466666542 11110011 124567665 458999887764
No 115
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=53.61 E-value=90 Score=27.93 Aligned_cols=91 Identities=14% Similarity=0.056 Sum_probs=51.9
Q ss_pred EEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCcEEEEEee
Q 035867 90 HIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTSKPVGGSGAGGLAAVQKVMKEIGNRMEKFARLMGVPFEFNVIH 169 (362)
Q Consensus 90 HIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~~~~~~~~~~~~~~~~~~l~etg~rL~~fA~~~gvpfeF~~v~ 169 (362)
.|+|+|.|.|. +...|+.+- -++|||+.+. ..++ .|+.. -.++|..
T Consensus 42 ~vLDvGcGtG~----~~~~l~~~~-----~~v~gvD~s~--------------~ml~--------~a~~~-~~v~~~~-- 87 (257)
T 4hg2_A 42 DALDCGCGSGQ----ASLGLAEFF-----ERVHAVDPGE--------------AQIR--------QALRH-PRVTYAV-- 87 (257)
T ss_dssp EEEEESCTTTT----THHHHHTTC-----SEEEEEESCH--------------HHHH--------TCCCC-TTEEEEE--
T ss_pred CEEEEcCCCCH----HHHHHHHhC-----CEEEEEeCcH--------------Hhhh--------hhhhc-CCceeeh--
Confidence 58999999985 345566552 2699998642 2232 23221 2344422
Q ss_pred ccCCcccCccccccccCCCeEEEeccccccccccccCcHHHHHHH-HHhcCCcEEEEE
Q 035867 170 HVGDLCDLNLAELDVRSDEALAINCIGALHTIAAVDDRRDVLISN-LRSLQPRIITVV 226 (362)
Q Consensus 170 ~~~~~e~l~~~~l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~-ir~L~P~vvvlv 226 (362)
.+.+++. +.++..=+|-|...+|++. .+.+|+. -|-|+|.-++++
T Consensus 88 --~~~e~~~-----~~~~sfD~v~~~~~~h~~~-----~~~~~~e~~rvLkpgG~l~~ 133 (257)
T 4hg2_A 88 --APAEDTG-----LPPASVDVAIAAQAMHWFD-----LDRFWAELRRVARPGAVFAA 133 (257)
T ss_dssp --CCTTCCC-----CCSSCEEEEEECSCCTTCC-----HHHHHHHHHHHEEEEEEEEE
T ss_pred --hhhhhhc-----ccCCcccEEEEeeehhHhh-----HHHHHHHHHHHcCCCCEEEE
Confidence 3555543 3344444555666778772 3455654 466799887653
No 116
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=52.95 E-value=63 Score=27.01 Aligned_cols=46 Identities=15% Similarity=0.010 Sum_probs=29.8
Q ss_pred HHHHHHHhhhc--CCCeeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccC
Q 035867 74 ACNGAIMEAFE--GESKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTS 127 (362)
Q Consensus 74 taNqaIleA~~--g~~~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~ 127 (362)
...+.+++.+. -.+.-.|+|+|.|.|. +...|+.+ +..++|||+.+
T Consensus 45 ~~~~~~~~~l~~~~~~~~~vLDiG~G~G~----~~~~l~~~----~~~~v~~vD~s 92 (205)
T 3grz_A 45 QTTQLAMLGIERAMVKPLTVADVGTGSGI----LAIAAHKL----GAKSVLATDIS 92 (205)
T ss_dssp HHHHHHHHHHHHHCSSCCEEEEETCTTSH----HHHHHHHT----TCSEEEEEESC
T ss_pred ccHHHHHHHHHHhccCCCEEEEECCCCCH----HHHHHHHC----CCCEEEEEECC
Confidence 34455555554 2345689999999883 44446665 23589999864
No 117
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=51.82 E-value=50 Score=28.85 Aligned_cols=110 Identities=14% Similarity=0.085 Sum_probs=56.6
Q ss_pred CeeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCc-EEE
Q 035867 87 SKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTSKPVGGSGAGGLAAVQKVMKEIGNRMEKFARLMGVP-FEF 165 (362)
Q Consensus 87 ~~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~~~~~~~~~~~~~~~~~~l~etg~rL~~fA~~~gvp-feF 165 (362)
..=+|+|+|.|.| .+...||.+. |..++|||+.+.+. .++ ...+..+-++..|++ .+|
T Consensus 24 ~~~~vLDiGCG~G----~~~~~la~~~---~~~~v~GvD~s~~~-------------ml~-~A~~A~~~~~~~~~~~v~~ 82 (225)
T 3p2e_A 24 FDRVHIDLGTGDG----RNIYKLAIND---QNTFYIGIDPVKEN-------------LFD-ISKKIIKKPSKGGLSNVVF 82 (225)
T ss_dssp CSEEEEEETCTTS----HHHHHHHHTC---TTEEEEEECSCCGG-------------GHH-HHHHHTSCGGGTCCSSEEE
T ss_pred CCCEEEEEeccCc----HHHHHHHHhC---CCCEEEEEeCCHHH-------------HHH-HHHHHHHHHHHcCCCCeEE
Confidence 3447999999988 4566677653 45889999976431 122 211112223445664 566
Q ss_pred EEeeccCCcccCccccccccCCCeEEEecccccccccc--ccCcHHHHHHH-HHhcCCcEEEEE
Q 035867 166 NVIHHVGDLCDLNLAELDVRSDEALAINCIGALHTIAA--VDDRRDVLISN-LRSLQPRIITVV 226 (362)
Q Consensus 166 ~~v~~~~~~e~l~~~~l~~~~~E~laVN~~~~Lh~l~~--~~~~~~~~L~~-ir~L~P~vvvlv 226 (362)
+ ..+.+++.. . ..|-+..|.+.+...+... ..+. ..+|+. -|-|+|.-.+++
T Consensus 83 --~--~~d~~~l~~-~---~~d~v~~i~~~~~~~~~~~~~~~~~-~~~l~~~~r~LkpGG~l~i 137 (225)
T 3p2e_A 83 --V--IAAAESLPF-E---LKNIADSISILFPWGTLLEYVIKPN-RDILSNVADLAKKEAHFEF 137 (225)
T ss_dssp --E--CCBTTBCCG-G---GTTCEEEEEEESCCHHHHHHHHTTC-HHHHHHHHTTEEEEEEEEE
T ss_pred --E--EcCHHHhhh-h---ccCeEEEEEEeCCCcHHhhhhhcch-HHHHHHHHHhcCCCcEEEE
Confidence 2 235666521 1 1243444444433222110 0122 335554 466799887765
No 118
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=51.52 E-value=27 Score=30.28 Aligned_cols=104 Identities=17% Similarity=0.163 Sum_probs=52.9
Q ss_pred eeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCcEEEEE
Q 035867 88 KLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTSKPVGGSGAGGLAAVQKVMKEIGNRMEKFARLMGVPFEFNV 167 (362)
Q Consensus 88 ~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~~~~~~~~~~~~~~~~~~l~etg~rL~~fA~~~gvpfeF~~ 167 (362)
.-.|+|+|.|.|. +...|+.+ ++ ++|||+.+. ..++.+.+++ . .-..+|..
T Consensus 57 ~~~vLD~GcG~G~----~~~~la~~--~~---~v~gvD~s~--------------~~~~~a~~~~----~--~~~~~~~~ 107 (245)
T 3ggd_A 57 ELPLIDFACGNGT----QTKFLSQF--FP---RVIGLDVSK--------------SALEIAAKEN----T--AANISYRL 107 (245)
T ss_dssp TSCEEEETCTTSH----HHHHHHHH--SS---CEEEEESCH--------------HHHHHHHHHS----C--CTTEEEEE
T ss_pred CCeEEEEcCCCCH----HHHHHHHh--CC---CEEEEECCH--------------HHHHHHHHhC----c--ccCceEEE
Confidence 3459999999884 45555554 22 799998642 2343333322 1 12445532
Q ss_pred eeccCCcccCccccccccCCC-eEEEeccccccccccccCcHHHHHHHH-HhcCCcEE-EEEc
Q 035867 168 IHHVGDLCDLNLAELDVRSDE-ALAINCIGALHTIAAVDDRRDVLISNL-RSLQPRII-TVVE 227 (362)
Q Consensus 168 v~~~~~~e~l~~~~l~~~~~E-~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~vv-vlvE 227 (362)
.++.++.... ...++. .-+|-+...+|++.. .....+|+.+ +.|+|.-. +++|
T Consensus 108 ----~d~~~~~~~~-~~~~~~~~d~v~~~~~~~~~~~--~~~~~~l~~~~~~LkpgG~l~i~~ 163 (245)
T 3ggd_A 108 ----LDGLVPEQAA-QIHSEIGDANIYMRTGFHHIPV--EKRELLGQSLRILLGKQGAMYLIE 163 (245)
T ss_dssp ----CCTTCHHHHH-HHHHHHCSCEEEEESSSTTSCG--GGHHHHHHHHHHHHTTTCEEEEEE
T ss_pred ----Cccccccccc-ccccccCccEEEEcchhhcCCH--HHHHHHHHHHHHHcCCCCEEEEEe
Confidence 2455432211 111000 223444445687742 2355566654 66799765 4554
No 119
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=51.43 E-value=41 Score=29.64 Aligned_cols=102 Identities=14% Similarity=0.086 Sum_probs=53.6
Q ss_pred eeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCc--EEE
Q 035867 88 KLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTSKPVGGSGAGGLAAVQKVMKEIGNRMEKFARLMGVP--FEF 165 (362)
Q Consensus 88 ~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~~~~~~~~~~~~~~~~~~l~etg~rL~~fA~~~gvp--feF 165 (362)
.-.|+|+|.|.|. ....||.+- ||.-++|+|+.+. ..++.+. +.++..|++ .+|
T Consensus 64 ~~~VLdiG~G~G~----~~~~la~~~--~~~~~v~~vD~s~--------------~~~~~a~----~~~~~~g~~~~v~~ 119 (248)
T 3tfw_A 64 AKRILEIGTLGGY----STIWMAREL--PADGQLLTLEADA--------------HHAQVAR----ENLQLAGVDQRVTL 119 (248)
T ss_dssp CSEEEEECCTTSH----HHHHHHTTS--CTTCEEEEEECCH--------------HHHHHHH----HHHHHTTCTTTEEE
T ss_pred CCEEEEecCCchH----HHHHHHHhC--CCCCEEEEEECCH--------------HHHHHHH----HHHHHcCCCCcEEE
Confidence 3489999999885 233455442 3357899998642 2333333 334556765 555
Q ss_pred EEeeccCCcccCcccccc-ccCCCeEEEeccccccccccccCcHHHHHH-HHHhcCCcEEEEEc
Q 035867 166 NVIHHVGDLCDLNLAELD-VRSDEALAINCIGALHTIAAVDDRRDVLIS-NLRSLQPRIITVVE 227 (362)
Q Consensus 166 ~~v~~~~~~e~l~~~~l~-~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~-~ir~L~P~vvvlvE 227 (362)
.. .+..+.-+ .+. ...=+.|+++.. ......+|+ ..+.|+|.-+++++
T Consensus 120 ~~----~d~~~~l~-~~~~~~~fD~V~~d~~---------~~~~~~~l~~~~~~LkpGG~lv~~ 169 (248)
T 3tfw_A 120 RE----GPALQSLE-SLGECPAFDLIFIDAD---------KPNNPHYLRWALRYSRPGTLIIGD 169 (248)
T ss_dssp EE----SCHHHHHH-TCCSCCCCSEEEECSC---------GGGHHHHHHHHHHTCCTTCEEEEE
T ss_pred EE----cCHHHHHH-hcCCCCCeEEEEECCc---------hHHHHHHHHHHHHhcCCCeEEEEe
Confidence 33 23332111 111 112245554432 112334554 45778999988875
No 120
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=51.26 E-value=74 Score=28.12 Aligned_cols=40 Identities=20% Similarity=0.090 Sum_probs=24.5
Q ss_pred CCeEEEeccccccccccccCcHHHHHHHH-HhcCCcEEEEE
Q 035867 187 DEALAINCIGALHTIAAVDDRRDVLISNL-RSLQPRIITVV 226 (362)
Q Consensus 187 ~E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~vvvlv 226 (362)
+..=+|-+.+.|||+.........+|+.| +-|+|.-.++.
T Consensus 155 ~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~ 195 (263)
T 2a14_A 155 PLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVT 195 (263)
T ss_dssp CCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEE
T ss_pred CCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEE
Confidence 34555667777898743222344566655 55799877664
No 121
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=49.75 E-value=79 Score=26.18 Aligned_cols=33 Identities=21% Similarity=0.120 Sum_probs=22.6
Q ss_pred CeeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccC
Q 035867 87 SKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTS 127 (362)
Q Consensus 87 ~~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~ 127 (362)
..-.|+|+|.|.|. +...|+.+ ++. ++||++.+
T Consensus 42 ~~~~vLdiGcG~G~----~~~~l~~~--~~~--~v~~~D~s 74 (215)
T 2pxx_A 42 PEDRILVLGCGNSA----LSYELFLG--GFP--NVTSVDYS 74 (215)
T ss_dssp TTCCEEEETCTTCS----HHHHHHHT--TCC--CEEEEESC
T ss_pred CCCeEEEECCCCcH----HHHHHHHc--CCC--cEEEEeCC
Confidence 44579999999886 34455554 322 79999864
No 122
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=48.40 E-value=1.2e+02 Score=25.52 Aligned_cols=100 Identities=14% Similarity=0.251 Sum_probs=52.9
Q ss_pred CCeeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCcEEE
Q 035867 86 ESKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTSKPVGGSGAGGLAAVQKVMKEIGNRMEKFARLMGVPFEF 165 (362)
Q Consensus 86 ~~~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~~~~~~~~~~~~~~~~~~l~etg~rL~~fA~~~gvpfeF 165 (362)
.+.-.|+|+|.|.|. +...|+.+ ++ ++|||+.+. ..++...+++ -..+|
T Consensus 39 ~~~~~vLdiG~G~G~----~~~~l~~~--~~---~v~~~D~s~--------------~~~~~a~~~~--------~~~~~ 87 (239)
T 3bxo_A 39 PEASSLLDVACGTGT----HLEHFTKE--FG---DTAGLELSE--------------DMLTHARKRL--------PDATL 87 (239)
T ss_dssp TTCCEEEEETCTTSH----HHHHHHHH--HS---EEEEEESCH--------------HHHHHHHHHC--------TTCEE
T ss_pred CCCCeEEEecccCCH----HHHHHHHh--CC---cEEEEeCCH--------------HHHHHHHHhC--------CCCEE
Confidence 344689999999885 33444443 22 799998642 2333332221 12344
Q ss_pred EEeeccCCcccCccccccccCCC-eEEEeccccccccccccCcHHHHHHHH-HhcCCcEEEEEc
Q 035867 166 NVIHHVGDLCDLNLAELDVRSDE-ALAINCIGALHTIAAVDDRRDVLISNL-RSLQPRIITVVE 227 (362)
Q Consensus 166 ~~v~~~~~~e~l~~~~l~~~~~E-~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~vvvlvE 227 (362)
.. .++.++. . ++. -+|+.+.-.+||+... .....+|+.+ +.|+|.-.++++
T Consensus 88 ~~----~d~~~~~-----~-~~~~D~v~~~~~~~~~~~~~-~~~~~~l~~~~~~L~pgG~l~~~ 140 (239)
T 3bxo_A 88 HQ----GDMRDFR-----L-GRKFSAVVSMFSSVGYLKTT-EELGAAVASFAEHLEPGGVVVVE 140 (239)
T ss_dssp EE----CCTTTCC-----C-SSCEEEEEECTTGGGGCCSH-HHHHHHHHHHHHTEEEEEEEEEC
T ss_pred EE----CCHHHcc-----c-CCCCcEEEEcCchHhhcCCH-HHHHHHHHHHHHhcCCCeEEEEE
Confidence 22 2444432 1 222 2333223367887532 2345566654 667999888775
No 123
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=48.36 E-value=67 Score=30.87 Aligned_cols=100 Identities=12% Similarity=0.124 Sum_probs=53.2
Q ss_pred EEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCcEEEEEee
Q 035867 90 HIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTSKPVGGSGAGGLAAVQKVMKEIGNRMEKFARLMGVPFEFNVIH 169 (362)
Q Consensus 90 HIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~~~~~~~~~~~~~~~~~~l~etg~rL~~fA~~~gvpfeF~~v~ 169 (362)
+|+|+|-|.| .-++ +|.+.|. -|++||+.+.- + +..+ +.++..|+.=....|.
T Consensus 86 ~VLDvG~GtG--iLs~---~Aa~aGA---~~V~ave~s~~---------------~-~~a~---~~~~~n~~~~~i~~i~ 138 (376)
T 4hc4_A 86 TVLDVGAGTG--ILSI---FCAQAGA---RRVYAVEASAI---------------W-QQAR---EVVRFNGLEDRVHVLP 138 (376)
T ss_dssp EEEEETCTTS--HHHH---HHHHTTC---SEEEEEECSTT---------------H-HHHH---HHHHHTTCTTTEEEEE
T ss_pred EEEEeCCCcc--HHHH---HHHHhCC---CEEEEEeChHH---------------H-HHHH---HHHHHcCCCceEEEEe
Confidence 5899998877 2343 4555543 27899985421 1 1222 3344556653344453
Q ss_pred ccCCcccCccccccccCCCeEEEeccccccccccccCcHHHHHHHH-HhcCCcEEEE
Q 035867 170 HVGDLCDLNLAELDVRSDEALAINCIGALHTIAAVDDRRDVLISNL-RSLQPRIITV 225 (362)
Q Consensus 170 ~~~~~e~l~~~~l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~vvvl 225 (362)
.++++++.. +.+=+|-|-..-+.+ -..+..+.++... |-|+|.-+++
T Consensus 139 --~~~~~~~lp------e~~DvivsE~~~~~l-~~e~~l~~~l~a~~r~Lkp~G~~i 186 (376)
T 4hc4_A 139 --GPVETVELP------EQVDAIVSEWMGYGL-LHESMLSSVLHARTKWLKEGGLLL 186 (376)
T ss_dssp --SCTTTCCCS------SCEEEEECCCCBTTB-TTTCSHHHHHHHHHHHEEEEEEEE
T ss_pred --eeeeeecCC------ccccEEEeecccccc-cccchhhhHHHHHHhhCCCCceEC
Confidence 467766432 112122232111222 2244577888776 6678887776
No 124
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=45.94 E-value=2.1e+02 Score=27.61 Aligned_cols=95 Identities=16% Similarity=0.186 Sum_probs=56.6
Q ss_pred eEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCcEEEEEe
Q 035867 89 LHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTSKPVGGSGAGGLAAVQKVMKEIGNRMEKFARLMGVPFEFNVI 168 (362)
Q Consensus 89 VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~~~~~~~~~~~~~~~~~~l~etg~rL~~fA~~~gvpfeF~~v 168 (362)
-.|+|+|.|.|. +...||.+ + -+++||+.+. ..++.+.++ |+..|++.+|..
T Consensus 292 ~~VLDlgcG~G~----~sl~la~~--~---~~V~gvD~s~--------------~ai~~A~~n----~~~ngl~v~~~~- 343 (425)
T 2jjq_A 292 EKILDMYSGVGT----FGIYLAKR--G---FNVKGFDSNE--------------FAIEMARRN----VEINNVDAEFEV- 343 (425)
T ss_dssp SEEEEETCTTTH----HHHHHHHT--T---CEEEEEESCH--------------HHHHHHHHH----HHHHTCCEEEEE-
T ss_pred CEEEEeeccchH----HHHHHHHc--C---CEEEEEECCH--------------HHHHHHHHH----HHHcCCcEEEEE-
Confidence 378999999885 44456654 2 2799998653 234444333 344577755532
Q ss_pred eccCCcccCccccccccCCCeEEEeccccccccccccCcHHHHHHHHHhcCCcEEEEEc
Q 035867 169 HHVGDLCDLNLAELDVRSDEALAINCIGALHTIAAVDDRRDVLISNLRSLQPRIITVVE 227 (362)
Q Consensus 169 ~~~~~~e~l~~~~l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~ir~L~P~vvvlvE 227 (362)
.+++++... .=+++++|-.. ....+.+++.++.++|.-++.+.
T Consensus 344 ---~d~~~~~~~-----~fD~Vv~dPPr--------~g~~~~~~~~l~~l~p~givyvs 386 (425)
T 2jjq_A 344 ---ASDREVSVK-----GFDTVIVDPPR--------AGLHPRLVKRLNREKPGVIVYVS 386 (425)
T ss_dssp ---CCTTTCCCT-----TCSEEEECCCT--------TCSCHHHHHHHHHHCCSEEEEEE
T ss_pred ---CChHHcCcc-----CCCEEEEcCCc--------cchHHHHHHHHHhcCCCcEEEEE
Confidence 355554222 22466665432 11234688999999999888873
No 125
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=45.21 E-value=93 Score=28.16 Aligned_cols=42 Identities=7% Similarity=0.071 Sum_probs=28.3
Q ss_pred HHHHhhhcCCCeeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccC
Q 035867 77 GAIMEAFEGESKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTS 127 (362)
Q Consensus 77 qaIleA~~g~~~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~ 127 (362)
+.|++++.-...-+|+|+|.|.|.--..|. .+ + -++|||+.+
T Consensus 18 ~~i~~~~~~~~~~~VLDiG~G~G~lt~~L~----~~-~----~~v~~vD~~ 59 (285)
T 1zq9_A 18 NSIIDKAALRPTDVVLEVGPGTGNMTVKLL----EK-A----KKVVACELD 59 (285)
T ss_dssp HHHHHHTCCCTTCEEEEECCTTSTTHHHHH----HH-S----SEEEEEESC
T ss_pred HHHHHhcCCCCCCEEEEEcCcccHHHHHHH----hh-C----CEEEEEECC
Confidence 456666654555689999999997544444 33 1 279999865
No 126
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=44.87 E-value=37 Score=34.31 Aligned_cols=83 Identities=14% Similarity=0.155 Sum_probs=51.8
Q ss_pred CeeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHcC-CcEEE
Q 035867 87 SKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTSKPVGGSGAGGLAAVQKVMKEIGNRMEKFARLMG-VPFEF 165 (362)
Q Consensus 87 ~~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~~~~~~~~~~~~~~~~~~l~etg~rL~~fA~~~g-vpfeF 165 (362)
+-+.|+|+|.|.|. |-..||.+ | -++|||+.+. ..++ +.+ ..|+.-| ++.+|
T Consensus 66 ~~~~vLDvGCG~G~----~~~~la~~-g----a~V~giD~~~--------------~~i~-~a~---~~a~~~~~~~~~~ 118 (569)
T 4azs_A 66 RPLNVLDLGCAQGF----FSLSLASK-G----ATIVGIDFQQ--------------ENIN-VCR---ALAEENPDFAAEF 118 (569)
T ss_dssp SCCEEEEETCTTSH----HHHHHHHT-T----CEEEEEESCH--------------HHHH-HHH---HHHHTSTTSEEEE
T ss_pred CCCeEEEECCCCcH----HHHHHHhC-C----CEEEEECCCH--------------HHHH-HHH---HHHHhcCCCceEE
Confidence 44789999999885 77888876 3 2699999653 2343 222 3455555 67777
Q ss_pred EEeeccCCcccCccccccccCCCeEEEecccccccccc
Q 035867 166 NVIHHVGDLCDLNLAELDVRSDEALAINCIGALHTIAA 203 (362)
Q Consensus 166 ~~v~~~~~~e~l~~~~l~~~~~E~laVN~~~~Lh~l~~ 203 (362)
... +++++... ..++..=+|-|+-.|||+.+
T Consensus 119 ~~~----~~~~~~~~---~~~~~fD~v~~~e~~ehv~~ 149 (569)
T 4azs_A 119 RVG----RIEEVIAA---LEEGEFDLAIGLSVFHHIVH 149 (569)
T ss_dssp EEC----CHHHHHHH---CCTTSCSEEEEESCHHHHHH
T ss_pred EEC----CHHHHhhh---ccCCCccEEEECcchhcCCC
Confidence 654 45554211 12333435667777899964
No 127
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=44.33 E-value=1.4e+02 Score=25.12 Aligned_cols=105 Identities=17% Similarity=0.112 Sum_probs=58.9
Q ss_pred HHHHhhhcCCCeeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccCCCCCCCCCCCchhHHHHHHHHHHHHHHHH
Q 035867 77 GAIMEAFEGESKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTSKPVGGSGAGGLAAVQKVMKEIGNRMEKFA 156 (362)
Q Consensus 77 qaIleA~~g~~~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~~~~~~~~~~~~~~~~~~l~etg~rL~~fA 156 (362)
..+++.+.-...-.|+|+|.|.|. +...||.+ + -++|||+.+. +.++.+. +-+
T Consensus 45 ~~~l~~l~~~~~~~vLDlGcG~G~----~~~~la~~-~----~~v~~vD~s~--------------~~~~~a~----~~~ 97 (204)
T 3njr_A 45 ALTLAALAPRRGELLWDIGGGSGS----VSVEWCLA-G----GRAITIEPRA--------------DRIENIQ----KNI 97 (204)
T ss_dssp HHHHHHHCCCTTCEEEEETCTTCH----HHHHHHHT-T----CEEEEEESCH--------------HHHHHHH----HHH
T ss_pred HHHHHhcCCCCCCEEEEecCCCCH----HHHHHHHc-C----CEEEEEeCCH--------------HHHHHHH----HHH
Confidence 446666665555679999999884 44556666 2 4799998642 2343333 335
Q ss_pred HHcCCc--EEEEEeeccCCcccCccccccccCCCeEEEeccccccccccccCcHHHHHHHH-HhcCCcEEEEE
Q 035867 157 RLMGVP--FEFNVIHHVGDLCDLNLAELDVRSDEALAINCIGALHTIAAVDDRRDVLISNL-RSLQPRIITVV 226 (362)
Q Consensus 157 ~~~gvp--feF~~v~~~~~~e~l~~~~l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~vvvlv 226 (362)
+..|++ ++|.. .+..+.-. . ...=++++++..+ ..+ +++.+ +.|+|.-.+++
T Consensus 98 ~~~g~~~~v~~~~----~d~~~~~~-~--~~~~D~v~~~~~~----------~~~-~l~~~~~~LkpgG~lv~ 152 (204)
T 3njr_A 98 DTYGLSPRMRAVQ----GTAPAALA-D--LPLPEAVFIGGGG----------SQA-LYDRLWEWLAPGTRIVA 152 (204)
T ss_dssp HHTTCTTTEEEEE----SCTTGGGT-T--SCCCSEEEECSCC----------CHH-HHHHHHHHSCTTCEEEE
T ss_pred HHcCCCCCEEEEe----Cchhhhcc-c--CCCCCEEEECCcc----------cHH-HHHHHHHhcCCCcEEEE
Confidence 567776 66632 24443111 1 1122455544421 234 66655 56899877765
No 128
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=43.31 E-value=1.1e+02 Score=27.37 Aligned_cols=42 Identities=21% Similarity=0.174 Sum_probs=31.1
Q ss_pred HHHHhhhcCCCeeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccC
Q 035867 77 GAIMEAFEGESKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTS 127 (362)
Q Consensus 77 qaIleA~~g~~~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~ 127 (362)
+.|++++.-...-+|+|+|-|.|. |-..|+.+. -++|||+.+
T Consensus 19 ~~iv~~~~~~~~~~VLEIG~G~G~----lt~~La~~~-----~~V~avEid 60 (255)
T 3tqs_A 19 QKIVSAIHPQKTDTLVEIGPGRGA----LTDYLLTEC-----DNLALVEID 60 (255)
T ss_dssp HHHHHHHCCCTTCEEEEECCTTTT----THHHHTTTS-----SEEEEEECC
T ss_pred HHHHHhcCCCCcCEEEEEcccccH----HHHHHHHhC-----CEEEEEECC
Confidence 446777765556689999999996 566777763 379999865
No 129
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=42.65 E-value=1.1e+02 Score=27.93 Aligned_cols=43 Identities=16% Similarity=0.045 Sum_probs=29.9
Q ss_pred HHHHHhhhcCCCeeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccC
Q 035867 76 NGAIMEAFEGESKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTS 127 (362)
Q Consensus 76 NqaIleA~~g~~~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~ 127 (362)
.+.|++++.-...-.|+|+|.|.|. +...|+.+ + -++|||+.+
T Consensus 31 ~~~i~~~~~~~~~~~VLDiG~G~G~----lt~~La~~-~----~~v~~vDi~ 73 (299)
T 2h1r_A 31 LDKIIYAAKIKSSDIVLEIGCGTGN----LTVKLLPL-A----KKVITIDID 73 (299)
T ss_dssp HHHHHHHHCCCTTCEEEEECCTTST----THHHHTTT-S----SEEEEECSC
T ss_pred HHHHHHhcCCCCcCEEEEEcCcCcH----HHHHHHhc-C----CEEEEEECC
Confidence 4556666654455589999999997 44556665 2 379999865
No 130
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=41.75 E-value=1.7e+02 Score=26.61 Aligned_cols=46 Identities=11% Similarity=0.003 Sum_probs=30.0
Q ss_pred HHHHHhhhcCCCeeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccC
Q 035867 76 NGAIMEAFEGESKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTS 127 (362)
Q Consensus 76 NqaIleA~~g~~~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~ 127 (362)
-..+++.+.-...-+|+|+|.|.|. +...|+.+ +++.-++|||+.+
T Consensus 64 ~~~l~~~l~~~~~~~VLDiGcG~G~----~~~~la~~--~~~~~~v~gvD~s 109 (317)
T 1dl5_A 64 MALFMEWVGLDKGMRVLEIGGGTGY----NAAVMSRV--VGEKGLVVSVEYS 109 (317)
T ss_dssp HHHHHHHTTCCTTCEEEEECCTTSH----HHHHHHHH--HCTTCEEEEEESC
T ss_pred HHHHHHhcCCCCcCEEEEecCCchH----HHHHHHHh--cCCCCEEEEEECC
Confidence 4456666655555689999998874 44445544 2234689999864
No 131
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=41.61 E-value=32 Score=32.08 Aligned_cols=116 Identities=17% Similarity=0.117 Sum_probs=63.5
Q ss_pred HHHHHHhhhcCCCeeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccCCCCCCCCCCCchhHHHHHHHHHHHHHH
Q 035867 75 CNGAIMEAFEGESKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTSKPVGGSGAGGLAAVQKVMKEIGNRMEK 154 (362)
Q Consensus 75 aNqaIleA~~g~~~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~~~~~~~~~~~~~~~~~~l~etg~rL~~ 154 (362)
..+.+++.+.....-+|+|+|.|.|. +...|+.+. |..++|+|+.+. ..++.+.+++
T Consensus 184 ~~~~ll~~l~~~~~~~VLDlGcG~G~----~~~~la~~~---~~~~v~~vD~s~--------------~~l~~a~~~~-- 240 (343)
T 2pjd_A 184 GSQLLLSTLTPHTKGKVLDVGCGAGV----LSVAFARHS---PKIRLTLCDVSA--------------PAVEASRATL-- 240 (343)
T ss_dssp HHHHHHHHSCTTCCSBCCBTTCTTSH----HHHHHHHHC---TTCBCEEEESBH--------------HHHHHHHHHH--
T ss_pred HHHHHHHhcCcCCCCeEEEecCccCH----HHHHHHHHC---CCCEEEEEECCH--------------HHHHHHHHHH--
Confidence 46778888853333479999999886 344454442 456899998642 2344443333
Q ss_pred HHHHcCCcEEEEEeeccCCcccCccccccccCCCeEEEecccccccccc-ccCcHHHHHHHH-HhcCCcEEEEE
Q 035867 155 FARLMGVPFEFNVIHHVGDLCDLNLAELDVRSDEALAINCIGALHTIAA-VDDRRDVLISNL-RSLQPRIITVV 226 (362)
Q Consensus 155 fA~~~gvpfeF~~v~~~~~~e~l~~~~l~~~~~E~laVN~~~~Lh~l~~-~~~~~~~~L~~i-r~L~P~vvvlv 226 (362)
+..|+..+| +. .+..+... ..=+.|+.|..| |+-.. .......+|+.+ +.|+|.-.+++
T Consensus 241 --~~~~~~~~~--~~--~d~~~~~~-----~~fD~Iv~~~~~--~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i 301 (343)
T 2pjd_A 241 --AANGVEGEV--FA--SNVFSEVK-----GRFDMIISNPPF--HDGMQTSLDAAQTLIRGAVRHLNSGGELRI 301 (343)
T ss_dssp --HHTTCCCEE--EE--CSTTTTCC-----SCEEEEEECCCC--CSSSHHHHHHHHHHHHHHGGGEEEEEEEEE
T ss_pred --HHhCCCCEE--EE--cccccccc-----CCeeEEEECCCc--ccCccCCHHHHHHHHHHHHHhCCCCcEEEE
Confidence 345676666 22 23322110 112455556554 54221 112345566654 66799887765
No 132
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=41.41 E-value=96 Score=26.82 Aligned_cols=99 Identities=17% Similarity=0.157 Sum_probs=52.2
Q ss_pred eeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCc-EEEE
Q 035867 88 KLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTSKPVGGSGAGGLAAVQKVMKEIGNRMEKFARLMGVP-FEFN 166 (362)
Q Consensus 88 ~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~~~~~~~~~~~~~~~~~~l~etg~rL~~fA~~~gvp-feF~ 166 (362)
.-+|+|+|.|.|.-= ..||.+ .|..++|||+.+. ..++.+. +.++..|++ .+|
T Consensus 71 ~~~vLDiG~G~G~~~----~~la~~---~~~~~v~~vD~s~--------------~~~~~a~----~~~~~~~~~~v~~- 124 (240)
T 1xdz_A 71 VNTICDVGAGAGFPS----LPIKIC---FPHLHVTIVDSLN--------------KRITFLE----KLSEALQLENTTF- 124 (240)
T ss_dssp CCEEEEECSSSCTTH----HHHHHH---CTTCEEEEEESCH--------------HHHHHHH----HHHHHHTCSSEEE-
T ss_pred CCEEEEecCCCCHHH----HHHHHh---CCCCEEEEEeCCH--------------HHHHHHH----HHHHHcCCCCEEE-
Confidence 458999999988622 223322 1346899998653 2233222 334455764 444
Q ss_pred EeeccCCcccCccccccccCC--CeEEEeccccccccccccCcHHHHHHHH-HhcCCcEEEEEc
Q 035867 167 VIHHVGDLCDLNLAELDVRSD--EALAINCIGALHTIAAVDDRRDVLISNL-RSLQPRIITVVE 227 (362)
Q Consensus 167 ~v~~~~~~e~l~~~~l~~~~~--E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~vvvlvE 227 (362)
+. .+++++... ... ++ +.|+.+. + ...+.+++.+ +-|+|.-.+++.
T Consensus 125 -~~--~d~~~~~~~-~~~-~~~fD~V~~~~------~----~~~~~~l~~~~~~LkpgG~l~~~ 173 (240)
T 1xdz_A 125 -CH--DRAETFGQR-KDV-RESYDIVTARA------V----ARLSVLSELCLPLVKKNGLFVAL 173 (240)
T ss_dssp -EE--SCHHHHTTC-TTT-TTCEEEEEEEC------C----SCHHHHHHHHGGGEEEEEEEEEE
T ss_pred -Ee--ccHHHhccc-ccc-cCCccEEEEec------c----CCHHHHHHHHHHhcCCCCEEEEE
Confidence 32 355544211 000 11 2333222 1 2356778776 778998877753
No 133
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=40.94 E-value=1.6e+02 Score=28.76 Aligned_cols=45 Identities=4% Similarity=-0.127 Sum_probs=29.1
Q ss_pred HHHHhhhcCCCeeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccCC
Q 035867 77 GAIMEAFEGESKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTSK 128 (362)
Q Consensus 77 qaIleA~~g~~~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~~ 128 (362)
..|++.+.-...-.|+|+|.|.|.+-.. ||.+. +..+++||+.+.
T Consensus 232 ~~ml~~l~l~~g~~VLDLGCGsG~la~~----LA~~~---g~~~V~GVDis~ 276 (433)
T 1u2z_A 232 SDVYQQCQLKKGDTFMDLGSGVGNCVVQ----AALEC---GCALSFGCEIMD 276 (433)
T ss_dssp HHHHHHTTCCTTCEEEEESCTTSHHHHH----HHHHH---CCSEEEEEECCH
T ss_pred HHHHHhcCCCCCCEEEEeCCCcCHHHHH----HHHHC---CCCEEEEEeCCH
Confidence 4566766655556799999998864333 33332 224799998653
No 134
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=40.53 E-value=56 Score=29.01 Aligned_cols=102 Identities=17% Similarity=0.114 Sum_probs=53.6
Q ss_pred CCeeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCc-EE
Q 035867 86 ESKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTSKPVGGSGAGGLAAVQKVMKEIGNRMEKFARLMGVP-FE 164 (362)
Q Consensus 86 ~~~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~~~~~~~~~~~~~~~~~~l~etg~rL~~fA~~~gvp-fe 164 (362)
...-+|+|+|.|.|.--..|-+. . |..++|+|+.+. +.++.+. +-++.+|+. .+
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~~---~----~~~~v~~vD~s~--------------~~~~~a~----~~~~~~~l~~v~ 133 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKIV---R----PELELVLVDATR--------------KKVAFVE----RAIEVLGLKGAR 133 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHHH---C----TTCEEEEEESCH--------------HHHHHHH----HHHHHHTCSSEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHH---C----CCCEEEEEECCH--------------HHHHHHH----HHHHHhCCCceE
Confidence 34568999999999743333222 1 457899998653 2333222 334556774 44
Q ss_pred EEEeeccCCcccCccccccccCCCeEEEeccccccccccccCcHHHHHHHH-HhcCCcEEEEE
Q 035867 165 FNVIHHVGDLCDLNLAELDVRSDEALAINCIGALHTIAAVDDRRDVLISNL-RSLQPRIITVV 226 (362)
Q Consensus 165 F~~v~~~~~~e~l~~~~l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~vvvlv 226 (362)
| +. .+++++......-..=+.++.+.. .+.+.++..+ +-|+|.-.+++
T Consensus 134 ~--~~--~d~~~~~~~~~~~~~fD~I~s~a~----------~~~~~ll~~~~~~LkpgG~l~~ 182 (249)
T 3g89_A 134 A--LW--GRAEVLAREAGHREAYARAVARAV----------APLCVLSELLLPFLEVGGAAVA 182 (249)
T ss_dssp E--EE--CCHHHHTTSTTTTTCEEEEEEESS----------CCHHHHHHHHGGGEEEEEEEEE
T ss_pred E--EE--CcHHHhhcccccCCCceEEEECCc----------CCHHHHHHHHHHHcCCCeEEEE
Confidence 4 32 356654321000011124433321 2345677755 56789876654
No 135
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=39.91 E-value=76 Score=27.47 Aligned_cols=110 Identities=10% Similarity=0.017 Sum_probs=57.6
Q ss_pred CeeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCc-EEE
Q 035867 87 SKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTSKPVGGSGAGGLAAVQKVMKEIGNRMEKFARLMGVP-FEF 165 (362)
Q Consensus 87 ~~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~~~~~~~~~~~~~~~~~~l~etg~rL~~fA~~~gvp-feF 165 (362)
+.-.|+|+|.|.|. +...||.+. |..+++||+.+. ..++.+. +-++..|++ ++|
T Consensus 34 ~~~~vLDiGcG~G~----~~~~lA~~~---p~~~v~giD~s~--------------~~l~~a~----~~~~~~~l~nv~~ 88 (218)
T 3dxy_A 34 EAPVTLEIGFGMGA----SLVAMAKDR---PEQDFLGIEVHS--------------PGVGACL----ASAHEEGLSNLRV 88 (218)
T ss_dssp CCCEEEEESCTTCH----HHHHHHHHC---TTSEEEEECSCH--------------HHHHHHH----HHHHHTTCSSEEE
T ss_pred CCCeEEEEeeeChH----HHHHHHHHC---CCCeEEEEEecH--------------HHHHHHH----HHHHHhCCCcEEE
Confidence 45579999999885 444555542 456899998653 2343333 334556663 555
Q ss_pred EEeeccCCcccCccccccccCC--CeEEEecccccccccccc--CcHHHHHHHH-HhcCCcEEEEEc
Q 035867 166 NVIHHVGDLCDLNLAELDVRSD--EALAINCIGALHTIAAVD--DRRDVLISNL-RSLQPRIITVVE 227 (362)
Q Consensus 166 ~~v~~~~~~e~l~~~~l~~~~~--E~laVN~~~~Lh~l~~~~--~~~~~~L~~i-r~L~P~vvvlvE 227 (362)
+. .+..++-... +.++ +.|++|+....++..... --...+|+.+ +.|+|.-++.+.
T Consensus 89 --~~--~Da~~~l~~~--~~~~~~d~v~~~~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~ 149 (218)
T 3dxy_A 89 --MC--HDAVEVLHKM--IPDNSLRMVQLFFPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMA 149 (218)
T ss_dssp --EC--SCHHHHHHHH--SCTTCEEEEEEESCCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEE
T ss_pred --EE--CCHHHHHHHH--cCCCChheEEEeCCCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEE
Confidence 32 3444421111 1222 355566443333221100 0013577766 559999988764
No 136
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=39.74 E-value=1.6e+02 Score=24.38 Aligned_cols=42 Identities=14% Similarity=0.081 Sum_probs=28.1
Q ss_pred HHHHhhhcCCCeeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccC
Q 035867 77 GAIMEAFEGESKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTS 127 (362)
Q Consensus 77 qaIleA~~g~~~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~ 127 (362)
..+++.+.-.+.-+|+|+|.|.|. +...|+.+ + -++|+|+.+
T Consensus 67 ~~~~~~l~~~~~~~vLdiG~G~G~----~~~~la~~-~----~~v~~vD~~ 108 (210)
T 3lbf_A 67 ARMTELLELTPQSRVLEIGTGSGY----QTAILAHL-V----QHVCSVERI 108 (210)
T ss_dssp HHHHHHTTCCTTCEEEEECCTTSH----HHHHHHHH-S----SEEEEEESC
T ss_pred HHHHHhcCCCCCCEEEEEcCCCCH----HHHHHHHh-C----CEEEEEecC
Confidence 445666665566789999999885 23344444 2 479999864
No 137
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=39.49 E-value=1.6e+02 Score=24.31 Aligned_cols=93 Identities=10% Similarity=0.039 Sum_probs=50.7
Q ss_pred CeeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCcEEEE
Q 035867 87 SKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTSKPVGGSGAGGLAAVQKVMKEIGNRMEKFARLMGVPFEFN 166 (362)
Q Consensus 87 ~~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~~~~~~~~~~~~~~~~~~l~etg~rL~~fA~~~gvpfeF~ 166 (362)
+.-+|+|+|.|.|. +...|+.+. + -++|||+.+. ..++.+.+ -++..|+..+|
T Consensus 49 ~~~~vlD~g~G~G~----~~~~l~~~~--~--~~v~~vD~~~--------------~~~~~a~~----~~~~~~~~~~~- 101 (207)
T 1wy7_A 49 EGKVVADLGAGTGV----LSYGALLLG--A--KEVICVEVDK--------------EAVDVLIE----NLGEFKGKFKV- 101 (207)
T ss_dssp TTCEEEEETCTTCH----HHHHHHHTT--C--SEEEEEESCH--------------HHHHHHHH----HTGGGTTSEEE-
T ss_pred CcCEEEEeeCCCCH----HHHHHHHcC--C--CEEEEEECCH--------------HHHHHHHH----HHHHcCCCEEE-
Confidence 34589999999986 455566652 1 2799998643 23433333 23445665554
Q ss_pred EeeccCCcccCccccccccCCCeEEEeccccccccccccCcHHHHHHHHHhcC
Q 035867 167 VIHHVGDLCDLNLAELDVRSDEALAINCIGALHTIAAVDDRRDVLISNLRSLQ 219 (362)
Q Consensus 167 ~v~~~~~~e~l~~~~l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~ir~L~ 219 (362)
+. .+..++. ..=+.|+.|..+. .... .....+|+.+.++-
T Consensus 102 -~~--~d~~~~~------~~~D~v~~~~p~~--~~~~--~~~~~~l~~~~~~l 141 (207)
T 1wy7_A 102 -FI--GDVSEFN------SRVDIVIMNPPFG--SQRK--HADRPFLLKAFEIS 141 (207)
T ss_dssp -EE--SCGGGCC------CCCSEEEECCCCS--SSST--TTTHHHHHHHHHHC
T ss_pred -EE--CchHHcC------CCCCEEEEcCCCc--cccC--CchHHHHHHHHHhc
Confidence 32 3555442 1235788887753 2221 22344666655544
No 138
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=37.42 E-value=49 Score=28.59 Aligned_cols=31 Identities=16% Similarity=0.109 Sum_probs=21.7
Q ss_pred eeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccC
Q 035867 88 KLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTS 127 (362)
Q Consensus 88 ~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~ 127 (362)
.-+|+|+|.|.|. +...|+.+ + .++|||+.+
T Consensus 42 ~~~vLDiGcG~G~----~~~~l~~~--~---~~v~gvD~s 72 (240)
T 3dli_A 42 CRRVLDIGCGRGE----FLELCKEE--G---IESIGVDIN 72 (240)
T ss_dssp CSCEEEETCTTTH----HHHHHHHH--T---CCEEEECSC
T ss_pred CCeEEEEeCCCCH----HHHHHHhC--C---CcEEEEECC
Confidence 3579999998875 45566665 2 258999864
No 139
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=37.41 E-value=64 Score=28.14 Aligned_cols=103 Identities=8% Similarity=0.029 Sum_probs=55.3
Q ss_pred CeeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCcEEEE
Q 035867 87 SKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTSKPVGGSGAGGLAAVQKVMKEIGNRMEKFARLMGVPFEFN 166 (362)
Q Consensus 87 ~~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~~~~~~~~~~~~~~~~~~l~etg~rL~~fA~~~gvpfeF~ 166 (362)
.--+|+|+|.|.|. ....++.+. | -++|+|+.+. ..+ ++..+.++..+....|.
T Consensus 60 ~G~rVLdiG~G~G~----~~~~~~~~~---~-~~v~~id~~~--------------~~~----~~a~~~~~~~~~~~~~~ 113 (236)
T 3orh_A 60 KGGRVLEVGFGMAI----AASKVQEAP---I-DEHWIIECND--------------GVF----QRLRDWAPRQTHKVIPL 113 (236)
T ss_dssp TCEEEEEECCTTSH----HHHHHTTSC---E-EEEEEEECCH--------------HHH----HHHHHHGGGCSSEEEEE
T ss_pred CCCeEEEECCCccH----HHHHHHHhC---C-cEEEEEeCCH--------------HHH----HHHHHHHhhCCCceEEE
Confidence 34579999999884 344566542 3 2789998642 223 23345566667666553
Q ss_pred EeeccCCcccCccccccccCC--CeEEEe---ccccccccccccCcHHHHHH-HHHhcCCcEEEEE
Q 035867 167 VIHHVGDLCDLNLAELDVRSD--EALAIN---CIGALHTIAAVDDRRDVLIS-NLRSLQPRIITVV 226 (362)
Q Consensus 167 ~v~~~~~~e~l~~~~l~~~~~--E~laVN---~~~~Lh~l~~~~~~~~~~L~-~ir~L~P~vvvlv 226 (362)
. .+++++... ..++ +.+... +...++|+. ..+.+++ ..|-|+|.-+.+.
T Consensus 114 ~----~~a~~~~~~---~~~~~FD~i~~D~~~~~~~~~~~~----~~~~~~~e~~rvLkPGG~l~f 168 (236)
T 3orh_A 114 K----GLWEDVAPT---LPDGHFDGILYDTYPLSEETWHTH----QFNFIKNHAFRLLKPGGVLTY 168 (236)
T ss_dssp E----SCHHHHGGG---SCTTCEEEEEECCCCCBGGGTTTH----HHHHHHHTHHHHEEEEEEEEE
T ss_pred e----ehHHhhccc---ccccCCceEEEeeeecccchhhhc----chhhhhhhhhheeCCCCEEEE
Confidence 3 244433221 1111 233322 233445553 3456676 4567899877653
No 140
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=37.32 E-value=1.6e+02 Score=24.71 Aligned_cols=22 Identities=18% Similarity=0.211 Sum_probs=17.6
Q ss_pred ccchhhHHHHHhhCCCccCcCC
Q 035867 296 RETATRWSGRLHGAGFSPFMFS 317 (362)
Q Consensus 296 ~e~~~~W~~r~~~aGF~~v~ls 317 (362)
.-+.+.|...+..+||+.+...
T Consensus 165 ~~~~~~l~~~l~~~Gf~~~~~~ 186 (219)
T 1vlm_A 165 FFSTEELMDLMRKAGFEEFKVV 186 (219)
T ss_dssp CCCHHHHHHHHHHTTCEEEEEE
T ss_pred cCCHHHHHHHHHHCCCeEEEEe
Confidence 3466799999999999877654
No 141
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=36.76 E-value=1e+02 Score=28.42 Aligned_cols=43 Identities=16% Similarity=0.125 Sum_probs=29.5
Q ss_pred HHHHhhhcCCCeeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccCC
Q 035867 77 GAIMEAFEGESKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTSK 128 (362)
Q Consensus 77 qaIleA~~g~~~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~~ 128 (362)
..|++++.-...-+|+|+|-|.|. |-..|+.+. -++|||+.+.
T Consensus 40 ~~Iv~~l~~~~~~~VLEIG~G~G~----lT~~La~~~-----~~V~aVEid~ 82 (295)
T 3gru_A 40 NKAVESANLTKDDVVLEIGLGKGI----LTEELAKNA-----KKVYVIEIDK 82 (295)
T ss_dssp HHHHHHTTCCTTCEEEEECCTTSH----HHHHHHHHS-----SEEEEEESCG
T ss_pred HHHHHhcCCCCcCEEEEECCCchH----HHHHHHhcC-----CEEEEEECCH
Confidence 446666655555689999999986 455555542 3799998764
No 142
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=36.61 E-value=2.6e+02 Score=25.94 Aligned_cols=113 Identities=12% Similarity=0.091 Sum_probs=59.4
Q ss_pred eeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHc-CCcEEEE
Q 035867 88 KLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTSKPVGGSGAGGLAAVQKVMKEIGNRMEKFARLM-GVPFEFN 166 (362)
Q Consensus 88 ~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~~~~~~~~~~~~~~~~~~l~etg~rL~~fA~~~-gvpfeF~ 166 (362)
.-+|+|+|.|.|. +...|+.+ +|.-+||+|+.+. ..++.+.+++.+.+..+ +-.++|.
T Consensus 121 ~~~VLdIG~G~G~----~a~~la~~---~~~~~V~~VDis~--------------~~l~~Ar~~~~~~~~gl~~~rv~~~ 179 (334)
T 1xj5_A 121 PKKVLVIGGGDGG----VLREVARH---ASIEQIDMCEIDK--------------MVVDVSKQFFPDVAIGYEDPRVNLV 179 (334)
T ss_dssp CCEEEEETCSSSH----HHHHHTTC---TTCCEEEEEESCH--------------HHHHHHHHHCHHHHGGGGSTTEEEE
T ss_pred CCEEEEECCCccH----HHHHHHHc---CCCCEEEEEECCH--------------HHHHHHHHHHHhhccccCCCcEEEE
Confidence 4589999999885 56667765 3457899998653 23544555554443322 1235553
Q ss_pred EeeccCCcccCccccccccCCCeEEEeccccccccccccCcHHHHHHH-HHhcCCcEEEEEcc
Q 035867 167 VIHHVGDLCDLNLAELDVRSDEALAINCIGALHTIAAVDDRRDVLISN-LRSLQPRIITVVEE 228 (362)
Q Consensus 167 ~v~~~~~~e~l~~~~l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~-ir~L~P~vvvlvE~ 228 (362)
. .+..+.-. .+.-..=+.|++|+....+... .-....+++. .+.|+|.-++++..
T Consensus 180 ~----~D~~~~l~-~~~~~~fDlIi~d~~~p~~~~~--~l~~~~~l~~~~~~LkpgG~lv~~~ 235 (334)
T 1xj5_A 180 I----GDGVAFLK-NAAEGSYDAVIVDSSDPIGPAK--ELFEKPFFQSVARALRPGGVVCTQA 235 (334)
T ss_dssp E----SCHHHHHH-TSCTTCEEEEEECCCCTTSGGG--GGGSHHHHHHHHHHEEEEEEEEEEC
T ss_pred E----CCHHHHHH-hccCCCccEEEECCCCccCcch--hhhHHHHHHHHHHhcCCCcEEEEec
Confidence 2 23322100 0000112466666643232211 1112455654 46789998888753
No 143
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=36.45 E-value=1.7e+02 Score=25.12 Aligned_cols=35 Identities=9% Similarity=-0.076 Sum_probs=22.8
Q ss_pred CCCeeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccC
Q 035867 85 GESKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTS 127 (362)
Q Consensus 85 g~~~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~ 127 (362)
..+.-.|+|+|.|.|.- ...|+.+ ++ .++|||+.+
T Consensus 54 ~~~~~~vLDlGcG~G~~----~~~l~~~--~~--~~v~gvD~s 88 (265)
T 2i62_A 54 AVKGELLIDIGSGPTIY----QLLSACE--SF--TEIIVSDYT 88 (265)
T ss_dssp SCCEEEEEEESCTTCCG----GGTTGGG--TE--EEEEEEESC
T ss_pred ccCCCEEEEECCCccHH----HHHHhhc--cc--CeEEEecCC
Confidence 35567899999998852 1223332 22 589999865
No 144
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=36.18 E-value=78 Score=27.13 Aligned_cols=32 Identities=13% Similarity=0.188 Sum_probs=21.0
Q ss_pred eEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccC
Q 035867 89 LHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTS 127 (362)
Q Consensus 89 VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~ 127 (362)
-+|+|+|.|.|. +...|+.+- |..++|+|+.+
T Consensus 56 ~~vLdiG~G~G~----~~~~la~~~---~~~~v~~vD~~ 87 (233)
T 2gpy_A 56 ARILEIGTAIGY----SAIRMAQAL---PEATIVSIERD 87 (233)
T ss_dssp SEEEEECCTTSH----HHHHHHHHC---TTCEEEEECCC
T ss_pred CEEEEecCCCcH----HHHHHHHHC---CCCEEEEEECC
Confidence 379999999885 233344432 24689999864
No 145
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=34.96 E-value=2.2e+02 Score=24.83 Aligned_cols=109 Identities=14% Similarity=0.053 Sum_probs=56.8
Q ss_pred CeeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCc--EE
Q 035867 87 SKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTSKPVGGSGAGGLAAVQKVMKEIGNRMEKFARLMGVP--FE 164 (362)
Q Consensus 87 ~~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~~~~~~~~~~~~~~~~~~l~etg~rL~~fA~~~gvp--fe 164 (362)
+.-.|+|+|.|.|. +...|+.+. +. +||||+.+. ..++.+.++ ++..|+. .+
T Consensus 49 ~~~~vLDlG~G~G~----~~~~la~~~---~~-~v~gvDi~~--------------~~~~~a~~n----~~~~~~~~~v~ 102 (259)
T 3lpm_A 49 RKGKIIDLCSGNGI----IPLLLSTRT---KA-KIVGVEIQE--------------RLADMAKRS----VAYNQLEDQIE 102 (259)
T ss_dssp SCCEEEETTCTTTH----HHHHHHTTC---CC-EEEEECCSH--------------HHHHHHHHH----HHHTTCTTTEE
T ss_pred CCCEEEEcCCchhH----HHHHHHHhc---CC-cEEEEECCH--------------HHHHHHHHH----HHHCCCcccEE
Confidence 35589999999984 555677763 22 899998642 233333333 3445664 44
Q ss_pred EEEeeccCCcccCccccccccCCCeEEEecccccc---ccccc-----------cCcHHHHHHHH-HhcCCcEEEEE
Q 035867 165 FNVIHHVGDLCDLNLAELDVRSDEALAINCIGALH---TIAAV-----------DDRRDVLISNL-RSLQPRIITVV 226 (362)
Q Consensus 165 F~~v~~~~~~e~l~~~~l~~~~~E~laVN~~~~Lh---~l~~~-----------~~~~~~~L~~i-r~L~P~vvvlv 226 (362)
| +. .++.++... +.-..=+.|+.|-.+.-. .+... ....+.+++.+ +-|+|.-.+++
T Consensus 103 ~--~~--~D~~~~~~~-~~~~~fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~ 174 (259)
T 3lpm_A 103 I--IE--YDLKKITDL-IPKERADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANF 174 (259)
T ss_dssp E--EC--SCGGGGGGT-SCTTCEEEEEECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEE
T ss_pred E--EE--CcHHHhhhh-hccCCccEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEE
Confidence 4 32 355544211 111222577777665322 22111 01234566554 56799877776
No 146
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=33.53 E-value=1.5e+02 Score=23.79 Aligned_cols=103 Identities=13% Similarity=0.053 Sum_probs=55.5
Q ss_pred eeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCc--EEE
Q 035867 88 KLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTSKPVGGSGAGGLAAVQKVMKEIGNRMEKFARLMGVP--FEF 165 (362)
Q Consensus 88 ~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~~~~~~~~~~~~~~~~~~l~etg~rL~~fA~~~gvp--feF 165 (362)
.-.|+|+|.|.|. +...++.++ .-++|||+.+. ..++.+.+ .++..|++ .+|
T Consensus 32 ~~~vLDlGcG~G~----~~~~l~~~~----~~~v~~vD~~~--------------~~~~~a~~----~~~~~~~~~~~~~ 85 (177)
T 2esr_A 32 GGRVLDLFAGSGG----LAIEAVSRG----MSAAVLVEKNR--------------KAQAIIQD----NIIMTKAENRFTL 85 (177)
T ss_dssp SCEEEEETCTTCH----HHHHHHHTT----CCEEEEECCCH--------------HHHHHHHH----HHHTTTCGGGEEE
T ss_pred CCeEEEeCCCCCH----HHHHHHHcC----CCEEEEEECCH--------------HHHHHHHH----HHHHcCCCCceEE
Confidence 3479999999885 444566652 25899998642 23433333 34456664 454
Q ss_pred EEeeccCCcccCccccccccCCCeEEEeccccccccccccCcHHHHHHHH---HhcCCcEEEEEccc
Q 035867 166 NVIHHVGDLCDLNLAELDVRSDEALAINCIGALHTIAAVDDRRDVLISNL---RSLQPRIITVVEEE 229 (362)
Q Consensus 166 ~~v~~~~~~e~l~~~~l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~i---r~L~P~vvvlvE~e 229 (362)
+. .++.+.... +. ..=+.++.|..+ |. ...+.+++.+ +-|+|.-+++++..
T Consensus 86 --~~--~d~~~~~~~-~~-~~fD~i~~~~~~--~~-----~~~~~~~~~l~~~~~L~~gG~l~~~~~ 139 (177)
T 2esr_A 86 --LK--MEAERAIDC-LT-GRFDLVFLDPPY--AK-----ETIVATIEALAAKNLLSEQVMVVCETD 139 (177)
T ss_dssp --EC--SCHHHHHHH-BC-SCEEEEEECCSS--HH-----HHHHHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred --EE--CcHHHhHHh-hc-CCCCEEEECCCC--Cc-----chHHHHHHHHHhCCCcCCCcEEEEEEC
Confidence 32 344332110 00 111466666554 21 1234456555 67899988877543
No 147
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=33.45 E-value=1.8e+02 Score=24.76 Aligned_cols=34 Identities=12% Similarity=0.065 Sum_probs=22.6
Q ss_pred eeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccC
Q 035867 88 KLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTS 127 (362)
Q Consensus 88 ~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~ 127 (362)
.-+|+|+|.|.|. +...|+.+-+ |.-+++||+.+
T Consensus 78 ~~~vLDlG~G~G~----~~~~la~~~g--~~~~v~gvD~s 111 (233)
T 2ipx_A 78 GAKVLYLGAASGT----TVSHVSDIVG--PDGLVYAVEFS 111 (233)
T ss_dssp TCEEEEECCTTSH----HHHHHHHHHC--TTCEEEEECCC
T ss_pred CCEEEEEcccCCH----HHHHHHHHhC--CCcEEEEEECC
Confidence 4489999999885 4445554421 33479999754
No 148
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=32.88 E-value=1.7e+02 Score=25.02 Aligned_cols=34 Identities=0% Similarity=-0.054 Sum_probs=23.3
Q ss_pred CCeeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccC
Q 035867 86 ESKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTS 127 (362)
Q Consensus 86 ~~~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~ 127 (362)
...-+|+|+|.|.|. +...|+.+. +. ++|||+.+
T Consensus 59 ~~~~~vLDiGcGtG~----~~~~l~~~~---~~-~v~gvD~s 92 (236)
T 1zx0_A 59 SKGGRVLEVGFGMAI----AASKVQEAP---ID-EHWIIECN 92 (236)
T ss_dssp TTCEEEEEECCTTSH----HHHHHHTSC---EE-EEEEEECC
T ss_pred CCCCeEEEEeccCCH----HHHHHHhcC---CC-eEEEEcCC
Confidence 345689999999884 445555432 22 89999865
No 149
>2kl8_A OR15; structural genomics, PSI-2, protein structure initiative, de novo protein, ferrodoxin fold; NMR {Artificial gene}
Probab=32.13 E-value=88 Score=22.57 Aligned_cols=35 Identities=23% Similarity=0.473 Sum_probs=22.0
Q ss_pred CeeEEEEeccCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCcEEEEE
Q 035867 117 PHLRLTTVVTSKPVGGSGAGGLAAVQKVMKEIGNRMEKFARLMGVPFEFNV 167 (362)
Q Consensus 117 P~lrIT~i~~~~~~~~~~~~~~~~~~~~l~etg~rL~~fA~~~gvpfeF~~ 167 (362)
-.+|||||.. +.-+|..+.-.+.|+.++|...|..
T Consensus 42 leiritgvpe----------------qvrkelakeaerlakefnitvtyti 76 (85)
T 2kl8_A 42 LEIRITGVPE----------------QVRKELAKEAERLAKEFNITVTYTI 76 (85)
T ss_dssp EEEEEESCCH----------------HHHHHHHHHHHHHHHHTCCEEEEEE
T ss_pred eEEEEecChH----------------HHHHHHHHHHHHHHHhcCeEEEEEE
Confidence 3699999842 1223444444456788999877753
No 150
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=30.99 E-value=2.6e+02 Score=24.15 Aligned_cols=32 Identities=16% Similarity=0.148 Sum_probs=23.4
Q ss_pred CeeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccC
Q 035867 87 SKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTS 127 (362)
Q Consensus 87 ~~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~ 127 (362)
..-.|+|+|.|.|. +...|+.+ + .++|||+.+
T Consensus 54 ~~~~vLDiGcG~G~----~~~~l~~~-~----~~v~gvD~s 85 (260)
T 2avn_A 54 NPCRVLDLGGGTGK----WSLFLQER-G----FEVVLVDPS 85 (260)
T ss_dssp SCCEEEEETCTTCH----HHHHHHTT-T----CEEEEEESC
T ss_pred CCCeEEEeCCCcCH----HHHHHHHc-C----CeEEEEeCC
Confidence 45589999999885 55566665 2 379999864
No 151
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=30.26 E-value=1.5e+02 Score=24.49 Aligned_cols=33 Identities=9% Similarity=-0.079 Sum_probs=23.2
Q ss_pred CeeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccC
Q 035867 87 SKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTS 127 (362)
Q Consensus 87 ~~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~ 127 (362)
+.-.|+|+|.|.|. +...|+.+ +.-++|||+.+
T Consensus 51 ~~~~vlD~gcG~G~----~~~~l~~~----~~~~v~~vD~~ 83 (200)
T 1ne2_A 51 GGRSVIDAGTGNGI----LACGSYLL----GAESVTAFDID 83 (200)
T ss_dssp BTSEEEEETCTTCH----HHHHHHHT----TBSEEEEEESC
T ss_pred CCCEEEEEeCCccH----HHHHHHHc----CCCEEEEEECC
Confidence 33479999999886 45566665 12479999864
No 152
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=29.61 E-value=2.2e+02 Score=25.83 Aligned_cols=46 Identities=26% Similarity=0.252 Sum_probs=30.5
Q ss_pred HHHHhhhcCCCeeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccC
Q 035867 77 GAIMEAFEGESKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTS 127 (362)
Q Consensus 77 qaIleA~~g~~~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~ 127 (362)
+.|++++.-...-+|+|+|-|.|.-=..|.+.... ...++|||+.+
T Consensus 32 ~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~-----~~~~V~avDid 77 (279)
T 3uzu_A 32 DAIVAAIRPERGERMVEIGPGLGALTGPVIARLAT-----PGSPLHAVELD 77 (279)
T ss_dssp HHHHHHHCCCTTCEEEEECCTTSTTHHHHHHHHCB-----TTBCEEEEECC
T ss_pred HHHHHhcCCCCcCEEEEEccccHHHHHHHHHhCCC-----cCCeEEEEECC
Confidence 44677776556668999999999854444443211 13569999865
No 153
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=29.56 E-value=39 Score=28.11 Aligned_cols=45 Identities=16% Similarity=0.200 Sum_probs=30.0
Q ss_pred HHHHhhhcC-CCeeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccCC
Q 035867 77 GAIMEAFEG-ESKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTSK 128 (362)
Q Consensus 77 qaIleA~~g-~~~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~~ 128 (362)
..+++.+.. .+.-+|+|+|.|.|. +...++.+. |..++|||+.+.
T Consensus 19 ~~~~~~l~~~~~~~~vLDiG~G~G~----~~~~l~~~~---~~~~v~~vD~~~ 64 (215)
T 4dzr_A 19 EEAIRFLKRMPSGTRVIDVGTGSGC----IAVSIALAC---PGVSVTAVDLSM 64 (215)
T ss_dssp HHHHHHHTTCCTTEEEEEEESSBCH----HHHHHHHHC---TTEEEEEEECC-
T ss_pred HHHHHHhhhcCCCCEEEEecCCHhH----HHHHHHHhC---CCCeEEEEECCH
Confidence 344555554 567899999999985 444444442 457899999764
No 154
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=29.53 E-value=2.1e+02 Score=22.73 Aligned_cols=41 Identities=22% Similarity=0.093 Sum_probs=27.1
Q ss_pred HHHhhhcCCCeeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccC
Q 035867 78 AIMEAFEGESKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTS 127 (362)
Q Consensus 78 aIleA~~g~~~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~ 127 (362)
.+++.+.-...-+|+|+|.|.|. +...++.+. .++|+++.+
T Consensus 24 ~~~~~~~~~~~~~vldiG~G~G~----~~~~l~~~~-----~~v~~~D~~ 64 (192)
T 1l3i_A 24 LIMCLAEPGKNDVAVDVGCGTGG----VTLELAGRV-----RRVYAIDRN 64 (192)
T ss_dssp HHHHHHCCCTTCEEEEESCTTSH----HHHHHHTTS-----SEEEEEESC
T ss_pred HHHHhcCCCCCCEEEEECCCCCH----HHHHHHHhc-----CEEEEEECC
Confidence 44454544455689999998874 444555543 589999864
No 155
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=29.06 E-value=2.8e+02 Score=25.90 Aligned_cols=97 Identities=13% Similarity=0.077 Sum_probs=51.8
Q ss_pred eeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCcEEEEE
Q 035867 88 KLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTSKPVGGSGAGGLAAVQKVMKEIGNRMEKFARLMGVPFEFNV 167 (362)
Q Consensus 88 ~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~~~~~~~~~~~~~~~~~~l~etg~rL~~fA~~~gvpfeF~~ 167 (362)
.-.|+|+| |.|. +...|+.+ + |..++|+|+.+. ..++.+.++ ++..|+. ..+.
T Consensus 173 ~~~VLDlG-G~G~----~~~~la~~--~-~~~~v~~vDi~~--------------~~l~~a~~~----~~~~g~~-~v~~ 225 (373)
T 2qm3_A 173 NKDIFVLG-DDDL----TSIALMLS--G-LPKRIAVLDIDE--------------RLTKFIEKA----ANEIGYE-DIEI 225 (373)
T ss_dssp TCEEEEES-CTTC----HHHHHHHH--T-CCSEEEEECSCH--------------HHHHHHHHH----HHHHTCC-CEEE
T ss_pred CCEEEEEC-CCCH----HHHHHHHh--C-CCCEEEEEECCH--------------HHHHHHHHH----HHHcCCC-CEEE
Confidence 35799999 9886 22334443 1 346899998643 234444333 4445663 2333
Q ss_pred eeccCCccc-CccccccccCCCeEEEeccccccccccccCcHHHHHHH-HHhcCCcE
Q 035867 168 IHHVGDLCD-LNLAELDVRSDEALAINCIGALHTIAAVDDRRDVLISN-LRSLQPRI 222 (362)
Q Consensus 168 v~~~~~~e~-l~~~~l~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~-ir~L~P~v 222 (362)
+. .++.+ +... +. ..=+.|++|..+.... ...+|+. .+.|+|.-
T Consensus 226 ~~--~D~~~~l~~~-~~-~~fD~Vi~~~p~~~~~-------~~~~l~~~~~~LkpgG 271 (373)
T 2qm3_A 226 FT--FDLRKPLPDY-AL-HKFDTFITDPPETLEA-------IRAFVGRGIATLKGPR 271 (373)
T ss_dssp EC--CCTTSCCCTT-TS-SCBSEEEECCCSSHHH-------HHHHHHHHHHTBCSTT
T ss_pred EE--Chhhhhchhh-cc-CCccEEEECCCCchHH-------HHHHHHHHHHHcccCC
Confidence 42 35544 3210 10 1226888887653321 2556655 47789943
No 156
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=28.73 E-value=2.4e+02 Score=26.37 Aligned_cols=108 Identities=21% Similarity=0.129 Sum_probs=57.3
Q ss_pred CCeeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHcCC--cE
Q 035867 86 ESKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTSKPVGGSGAGGLAAVQKVMKEIGNRMEKFARLMGV--PF 163 (362)
Q Consensus 86 ~~~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~~~~~~~~~~~~~~~~~~l~etg~rL~~fA~~~gv--pf 163 (362)
...-.|+|.|.|.|. +.-.+|.+. +.-+|+|++.+. ..++.+.++ ++..|+ ..
T Consensus 216 ~~~~~vLD~gCGsG~----~~i~~a~~~---~~~~v~g~Dis~--------------~~l~~A~~n----~~~~gl~~~i 270 (373)
T 3tm4_A 216 LDGGSVLDPMCGSGT----ILIELALRR---YSGEIIGIEKYR--------------KHLIGAEMN----ALAAGVLDKI 270 (373)
T ss_dssp CCSCCEEETTCTTCH----HHHHHHHTT---CCSCEEEEESCH--------------HHHHHHHHH----HHHTTCGGGC
T ss_pred CCCCEEEEccCcCcH----HHHHHHHhC---CCCeEEEEeCCH--------------HHHHHHHHH----HHHcCCCCce
Confidence 344579999999885 444555542 123799998653 234444433 345676 45
Q ss_pred EEEEeeccCCcccCccccccccCCCeEEEecccccccccccc---CcHHHHHHHHHh-cCCcEEEEE
Q 035867 164 EFNVIHHVGDLCDLNLAELDVRSDEALAINCIGALHTIAAVD---DRRDVLISNLRS-LQPRIITVV 226 (362)
Q Consensus 164 eF~~v~~~~~~e~l~~~~l~~~~~E~laVN~~~~Lh~l~~~~---~~~~~~L~~ir~-L~P~vvvlv 226 (362)
+|.. .+..++... ...=+.|+.|-.+... +.... .--..+++.++. |++.+++++
T Consensus 271 ~~~~----~D~~~~~~~---~~~fD~Ii~npPyg~r-~~~~~~~~~ly~~~~~~l~r~l~g~~~~i~ 329 (373)
T 3tm4_A 271 KFIQ----GDATQLSQY---VDSVDFAISNLPYGLK-IGKKSMIPDLYMKFFNELAKVLEKRGVFIT 329 (373)
T ss_dssp EEEE----CCGGGGGGT---CSCEEEEEEECCCC-------CCHHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred EEEE----CChhhCCcc---cCCcCEEEECCCCCcc-cCcchhHHHHHHHHHHHHHHHcCCeEEEEE
Confidence 6633 244444321 1222578888776432 11111 112456776665 666666664
No 157
>1yz7_A Probable translation initiation factor 2 alpha subunit; helical domain, alpha-beta domain; 2.26A {Pyrococcus abyssi}
Probab=28.69 E-value=74 Score=27.69 Aligned_cols=44 Identities=11% Similarity=0.180 Sum_probs=34.6
Q ss_pred CCCeeEEEEeccCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCcEEEEEe
Q 035867 115 DTPHLRLTTVVTSKPVGGSGAGGLAAVQKVMKEIGNRMEKFARLMGVPFEFNVI 168 (362)
Q Consensus 115 gpP~lrIT~i~~~~~~~~~~~~~~~~~~~~l~etg~rL~~fA~~~gvpfeF~~v 168 (362)
|||..|||....+.. .....|+++-+.+.+..+..|-.|.|+--
T Consensus 133 gaP~Y~i~~~~~Dkk----------~g~~~L~~aie~i~~~I~~~gG~~~v~r~ 176 (188)
T 1yz7_A 133 GAPRYRIDITAPDYY----------KAEEVLESIAEEILRVIKEAGGEATLLRK 176 (188)
T ss_dssp STTEEEEEEEESSHH----------HHHHHHHHHHHHHHHHHHHTTCEEEEECC
T ss_pred cCcEEEEEEeeCCHH----------HHHHHHHHHHHHHHHHHHHhCCEEEEEEc
Confidence 788888887765532 23567899999999999999999998643
No 158
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=28.35 E-value=94 Score=27.02 Aligned_cols=45 Identities=11% Similarity=0.084 Sum_probs=29.2
Q ss_pred HHhhhcCCCeeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccCC
Q 035867 79 IMEAFEGESKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTSK 128 (362)
Q Consensus 79 IleA~~g~~~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~~ 128 (362)
+++.+.+.....|+|+|.|.|. +.-.|+.+- ..|..+||||+.+.
T Consensus 43 ~l~~~~~~~~~~vLD~gcGsG~----~~~~la~~~-~~~~~~v~gvDis~ 87 (250)
T 1o9g_A 43 ALARLPGDGPVTLWDPCCGSGY----LLTVLGLLH-RRSLRQVIASDVDP 87 (250)
T ss_dssp HHHTSSCCSCEEEEETTCTTSH----HHHHHHHHT-GGGEEEEEEEESCH
T ss_pred HHHhcccCCCCeEEECCCCCCH----HHHHHHHHh-ccCCCeEEEEECCH
Confidence 4455555567899999999994 444444431 11457899998653
No 159
>4a69_A Histone deacetylase 3,; transcription, hydrolase; HET: I0P; 2.06A {Homo sapiens}
Probab=28.00 E-value=34 Score=33.19 Aligned_cols=23 Identities=17% Similarity=0.242 Sum_probs=18.0
Q ss_pred HHHhhhcCCCeeEEEeccCCCCC
Q 035867 78 AIMEAFEGESKLHIVDISNTYCT 100 (362)
Q Consensus 78 aIleA~~g~~~VHIIDf~i~~G~ 100 (362)
||..+.+..+||=|||+|+.||.
T Consensus 153 Aa~~l~~~~~RV~ivD~DvHHGn 175 (376)
T 4a69_A 153 GILELLKYHPRVLYIDIDIHHGD 175 (376)
T ss_dssp HHHHHTTTCSCEEEEECSSSCCH
T ss_pred HHHHHHHhCCcEEEEeccCCCCc
Confidence 44566666799999999998873
No 160
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=27.90 E-value=67 Score=26.32 Aligned_cols=28 Identities=14% Similarity=0.265 Sum_probs=22.2
Q ss_pred EEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccC
Q 035867 90 HIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTS 127 (362)
Q Consensus 90 HIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~ 127 (362)
.|+|+|.|.|. +...|+.+. ++|||+.+
T Consensus 26 ~vLD~GcG~G~----~~~~l~~~~------~v~gvD~s 53 (170)
T 3q87_B 26 IVLDLGTSTGV----ITEQLRKRN------TVVSTDLN 53 (170)
T ss_dssp EEEEETCTTCH----HHHHHTTTS------EEEEEESC
T ss_pred eEEEeccCccH----HHHHHHhcC------cEEEEECC
Confidence 89999999984 666676653 89999865
No 161
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=27.73 E-value=1.3e+02 Score=25.22 Aligned_cols=44 Identities=7% Similarity=0.072 Sum_probs=28.5
Q ss_pred HHHhhhcCCCeeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccC
Q 035867 78 AIMEAFEGESKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTS 127 (362)
Q Consensus 78 aIleA~~g~~~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~ 127 (362)
.+++.+.-...-.|+|+|.|.|..-..|.+.. .|.-++|+|+.+
T Consensus 68 ~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~------~~~~~v~~vD~~ 111 (215)
T 2yxe_A 68 MMCELLDLKPGMKVLEIGTGCGYHAAVTAEIV------GEDGLVVSIERI 111 (215)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHHHHHHHHH------CTTSEEEEEESC
T ss_pred HHHHhhCCCCCCEEEEECCCccHHHHHHHHHh------CCCCEEEEEeCC
Confidence 45566654555689999999886444443333 234589999864
No 162
>3max_A HD2, histone deacetylase 2; class 2, HDAC, foot pocket, hydrolase; HET: LLX NHE; 2.05A {Homo sapiens}
Probab=26.96 E-value=36 Score=32.87 Aligned_cols=23 Identities=22% Similarity=0.267 Sum_probs=18.0
Q ss_pred HHHhhhcCCCeeEEEeccCCCCC
Q 035867 78 AIMEAFEGESKLHIVDISNTYCT 100 (362)
Q Consensus 78 aIleA~~g~~~VHIIDf~i~~G~ 100 (362)
||..+.+..+||=|||+|+.||.
T Consensus 153 Aa~~l~~~~~RV~ivD~DvHHGn 175 (367)
T 3max_A 153 AILELLKYHQRVLYIDIDIHHGD 175 (367)
T ss_dssp HHHHHTTTCSCEEEEECSSSCCH
T ss_pred HHHHHHHcCCcEEEEecCCCCCc
Confidence 34556666799999999998874
No 163
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=26.93 E-value=3.2e+02 Score=23.96 Aligned_cols=45 Identities=13% Similarity=0.082 Sum_probs=28.8
Q ss_pred HHHHhhhc---CCCeeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccC
Q 035867 77 GAIMEAFE---GESKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTS 127 (362)
Q Consensus 77 qaIleA~~---g~~~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~ 127 (362)
.+|+++++ =...=+|+|+|.+.|. |...+-.+.. |.=+++||+.+
T Consensus 63 ~~ll~~l~~~~l~~g~~VLDlG~GtG~-~t~~la~~v~-----~~G~V~avD~s 110 (232)
T 3id6_C 63 GAILKGLKTNPIRKGTKVLYLGAASGT-TISHVSDIIE-----LNGKAYGVEFS 110 (232)
T ss_dssp HHHHTTCSCCSCCTTCEEEEETCTTSH-HHHHHHHHHT-----TTSEEEEEECC
T ss_pred HHHHhhhhhcCCCCCCEEEEEeecCCH-HHHHHHHHhC-----CCCEEEEEECc
Confidence 44555554 2334579999999987 5655555442 22379999864
No 164
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=26.56 E-value=77 Score=26.84 Aligned_cols=33 Identities=15% Similarity=0.019 Sum_probs=22.6
Q ss_pred eEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccC
Q 035867 89 LHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTS 127 (362)
Q Consensus 89 VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~ 127 (362)
-+|+|+|.|.|. ....|+.+- |+..++|+|+.+
T Consensus 66 ~~vLdiG~G~G~----~~~~la~~~--~~~~~v~~vD~~ 98 (225)
T 3tr6_A 66 KKVIDIGTFTGY----SAIAMGLAL--PKDGTLITCDVD 98 (225)
T ss_dssp SEEEEECCTTSH----HHHHHHTTC--CTTCEEEEEESC
T ss_pred CEEEEeCCcchH----HHHHHHHhC--CCCCEEEEEeCC
Confidence 389999999885 333455442 235789999864
No 165
>3ghf_A Septum site-determining protein MINC; structural genomics, cell division, cell cycle, septation, PSI-2, protein structure initiative; HET: CIT; 2.20A {Salmonella typhimurium LT2}
Probab=25.90 E-value=1.3e+02 Score=23.98 Aligned_cols=33 Identities=21% Similarity=0.426 Sum_probs=24.3
Q ss_pred eEEEeccCC-CCCCcHHHHHHHhcCCCCCCeeEEEEecc
Q 035867 89 LHIVDISNT-YCTQWPTLLEALATRTDDTPHLRLTTVVT 126 (362)
Q Consensus 89 VHIIDf~i~-~G~QWpsLiq~La~R~~gpP~lrIT~i~~ 126 (362)
-=|||++-. ...+|..|++.|.++. |++-||..
T Consensus 49 PVVlDl~~l~~~~dl~~L~~~l~~~g-----l~~vGV~g 82 (120)
T 3ghf_A 49 PVVINVSGLESPVNWPELHKIVTSTG-----LRIIGVSG 82 (120)
T ss_dssp EEEEEEEECCSSCCHHHHHHHHHTTT-----CEEEEEES
T ss_pred cEEEEccccCChHHHHHHHHHHHHcC-----CEEEEEeC
Confidence 347887743 4588999999998763 77888864
No 166
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=25.84 E-value=1.5e+02 Score=24.09 Aligned_cols=29 Identities=14% Similarity=-0.028 Sum_probs=21.8
Q ss_pred EEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccC
Q 035867 90 HIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTS 127 (362)
Q Consensus 90 HIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~ 127 (362)
+|+|+|.|.|. +...|+.+ .-++|||+.+
T Consensus 25 ~vLDiGcG~G~----~~~~la~~-----~~~v~~vD~s 53 (185)
T 3mti_A 25 IVVDATMGNGN----DTAFLAGL-----SKKVYAFDVQ 53 (185)
T ss_dssp EEEESCCTTSH----HHHHHHTT-----SSEEEEEESC
T ss_pred EEEEEcCCCCH----HHHHHHHh-----CCEEEEEECC
Confidence 69999999885 44556766 2579999865
No 167
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=25.80 E-value=1.9e+02 Score=26.71 Aligned_cols=113 Identities=12% Similarity=-0.005 Sum_probs=57.1
Q ss_pred HHhhhcCCCeeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHH
Q 035867 79 IMEAFEGESKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTSKPVGGSGAGGLAAVQKVMKEIGNRMEKFARL 158 (362)
Q Consensus 79 IleA~~g~~~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~~~~~~~~~~~~~~~~~~l~etg~rL~~fA~~ 158 (362)
+++...-...-.|+|.|.|.|. +.-.+|.+. .|..+|+|++.+. ..++.+.++ ++.
T Consensus 195 l~~~~~~~~~~~vLD~gcGsG~----~~ie~a~~~--~~~~~v~g~Di~~--------------~~i~~a~~n----~~~ 250 (354)
T 3tma_A 195 LLRLADARPGMRVLDPFTGSGT----IALEAASTL--GPTSPVYAGDLDE--------------KRLGLAREA----ALA 250 (354)
T ss_dssp HHHHTTCCTTCCEEESSCTTSH----HHHHHHHHH--CTTSCEEEEESCH--------------HHHHHHHHH----HHH
T ss_pred HHHHhCCCCCCEEEeCCCCcCH----HHHHHHHhh--CCCceEEEEECCH--------------HHHHHHHHH----HHH
Confidence 4444443444579999999985 333344432 1446799998653 234433333 455
Q ss_pred cCCc-EEEEEeeccCCcccCccccccccCCCeEEEeccccccccccc--cCcHHHHHHHH-HhcCCcE
Q 035867 159 MGVP-FEFNVIHHVGDLCDLNLAELDVRSDEALAINCIGALHTIAAV--DDRRDVLISNL-RSLQPRI 222 (362)
Q Consensus 159 ~gvp-feF~~v~~~~~~e~l~~~~l~~~~~E~laVN~~~~Lh~l~~~--~~~~~~~L~~i-r~L~P~v 222 (362)
.|++ .+|.. .+..++.... ..-+.++.|-.+....-... ..-...+++.+ +.|+|.-
T Consensus 251 ~g~~~i~~~~----~D~~~~~~~~---~~~D~Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG 311 (354)
T 3tma_A 251 SGLSWIRFLR----ADARHLPRFF---PEVDRILANPPHGLRLGRKEGLFHLYWDFLRGALALLPPGG 311 (354)
T ss_dssp TTCTTCEEEE----CCGGGGGGTC---CCCSEEEECCCSCC----CHHHHHHHHHHHHHHHHTSCTTC
T ss_pred cCCCceEEEe----CChhhCcccc---CCCCEEEECCCCcCccCCcccHHHHHHHHHHHHHHhcCCCc
Confidence 6775 44432 3455443211 11268888887743221100 01124566555 4567843
No 168
>3ew8_A HD8, histone deacetylase 8; hydrolase, HDAC, metalloenzyme, arginase fold, HDAC8, histon deacetylase, hydroxamate inhibitor, unliganded; HET: B3N; 1.80A {Homo sapiens} SCOP: c.42.1.2 PDB: 3f06_A* 3ezp_A* 3ezt_A* 3f0r_A* 3f07_A* 2v5w_A* 2v5x_A* 3ewf_A* 3mz4_A* 3mz6_A* 3mz7_A* 3rqd_A* 3mz3_A* 1t64_A* 1t67_A* 1t69_A* 1vkg_A* 1w22_A* 3sff_A* 3sfh_A*
Probab=25.65 E-value=39 Score=32.88 Aligned_cols=23 Identities=13% Similarity=0.085 Sum_probs=18.0
Q ss_pred HHHhhhcCCCeeEEEeccCCCCC
Q 035867 78 AIMEAFEGESKLHIVDISNTYCT 100 (362)
Q Consensus 78 aIleA~~g~~~VHIIDf~i~~G~ 100 (362)
||..+.++.+||=|||+|+.+|.
T Consensus 161 Aa~~l~~~~~RV~ivD~DvHHGn 183 (388)
T 3ew8_A 161 GILRLRRKFERILYVDLDLHHGD 183 (388)
T ss_dssp HHHHHTTTCSCEEEEECSSSCCH
T ss_pred HHHHHHhcCCeEEEEecCCCCCh
Confidence 34555667899999999998874
No 169
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=24.96 E-value=2.3e+02 Score=24.92 Aligned_cols=45 Identities=11% Similarity=0.037 Sum_probs=28.7
Q ss_pred HHHHhhhcCCCeeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccC
Q 035867 77 GAIMEAFEGESKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTS 127 (362)
Q Consensus 77 qaIleA~~g~~~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~ 127 (362)
..|++.+.-...-.|+|+|.|.|. +...|+.+-+ |..++|+++.+
T Consensus 102 ~~i~~~~~~~~~~~VLDiG~G~G~----~~~~la~~~~--~~~~v~~vD~s 146 (277)
T 1o54_A 102 SFIAMMLDVKEGDRIIDTGVGSGA----MCAVLARAVG--SSGKVFAYEKR 146 (277)
T ss_dssp HHHHHHTTCCTTCEEEEECCTTSH----HHHHHHHHTT--TTCEEEEECCC
T ss_pred HHHHHHhCCCCCCEEEEECCcCCH----HHHHHHHHhC--CCcEEEEEECC
Confidence 356666654445589999999884 3344444421 34589999854
No 170
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=22.06 E-value=76 Score=27.99 Aligned_cols=43 Identities=16% Similarity=0.105 Sum_probs=29.6
Q ss_pred HHHHHhhhcCCCeeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccC
Q 035867 76 NGAIMEAFEGESKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTS 127 (362)
Q Consensus 76 NqaIleA~~g~~~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~ 127 (362)
.+.|++++.-...-+|+|+|-|.|. +...|+.+. -++|||+.+
T Consensus 19 ~~~i~~~~~~~~~~~VLDiG~G~G~----lt~~l~~~~-----~~v~~vD~~ 61 (244)
T 1qam_A 19 IDKIMTNIRLNEHDNIFEIGSGKGH----FTLELVQRC-----NFVTAIEID 61 (244)
T ss_dssp HHHHHTTCCCCTTCEEEEECCTTSH----HHHHHHHHS-----SEEEEECSC
T ss_pred HHHHHHhCCCCCCCEEEEEeCCchH----HHHHHHHcC-----CeEEEEECC
Confidence 3456666654455689999999885 555666553 479999865
No 171
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=21.91 E-value=1.5e+02 Score=26.00 Aligned_cols=32 Identities=13% Similarity=0.012 Sum_probs=22.5
Q ss_pred eeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccCC
Q 035867 88 KLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTSK 128 (362)
Q Consensus 88 ~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~~ 128 (362)
.-+|+|+|.|.|. +...++.+ |+ +++|++.+.
T Consensus 121 ~~~VLDiGcG~G~----l~~~la~~--g~---~v~gvDi~~ 152 (254)
T 2nxc_A 121 GDKVLDLGTGSGV----LAIAAEKL--GG---KALGVDIDP 152 (254)
T ss_dssp TCEEEEETCTTSH----HHHHHHHT--TC---EEEEEESCG
T ss_pred CCEEEEecCCCcH----HHHHHHHh--CC---eEEEEECCH
Confidence 3479999999885 44445554 33 899998754
No 172
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=21.52 E-value=1.2e+02 Score=25.56 Aligned_cols=34 Identities=21% Similarity=0.049 Sum_probs=22.9
Q ss_pred eeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccC
Q 035867 88 KLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTS 127 (362)
Q Consensus 88 ~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~ 127 (362)
.-+|+|+|.|.|. +...|+.+- ||.-++|+|+.+
T Consensus 59 ~~~vLdiG~G~G~----~~~~la~~~--~~~~~v~~vD~~ 92 (223)
T 3duw_A 59 ARNILEIGTLGGY----STIWLARGL--SSGGRVVTLEAS 92 (223)
T ss_dssp CSEEEEECCTTSH----HHHHHHTTC--CSSCEEEEEESC
T ss_pred CCEEEEecCCccH----HHHHHHHhC--CCCCEEEEEECC
Confidence 3479999999884 333455542 335689999864
No 173
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=20.95 E-value=1.9e+02 Score=25.19 Aligned_cols=36 Identities=19% Similarity=0.278 Sum_probs=25.8
Q ss_pred CCCeeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccC
Q 035867 85 GESKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTS 127 (362)
Q Consensus 85 g~~~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~ 127 (362)
..+...|+|+|.|.|. ++..||.+. |...++||+.+
T Consensus 44 ~~~~~~vLDiGcG~G~----~~~~la~~~---p~~~v~GiDis 79 (235)
T 3ckk_A 44 AQAQVEFADIGCGYGG----LLVELSPLF---PDTLILGLEIR 79 (235)
T ss_dssp --CCEEEEEETCTTCH----HHHHHGGGS---TTSEEEEEESC
T ss_pred cCCCCeEEEEccCCcH----HHHHHHHHC---CCCeEEEEECC
Confidence 4556789999999885 556677653 45689999865
No 174
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=20.90 E-value=1.7e+02 Score=23.00 Aligned_cols=31 Identities=10% Similarity=-0.114 Sum_probs=21.7
Q ss_pred eeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccC
Q 035867 88 KLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTS 127 (362)
Q Consensus 88 ~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~ 127 (362)
.-+|+|+|.|.|. +...|+.+ + +. +|||+.+
T Consensus 42 ~~~vLD~GcG~G~----~~~~l~~~--~-~~--v~~vD~~ 72 (171)
T 1ws6_A 42 RGRFLDPFAGSGA----VGLEAASE--G-WE--AVLVEKD 72 (171)
T ss_dssp CCEEEEETCSSCH----HHHHHHHT--T-CE--EEEECCC
T ss_pred CCeEEEeCCCcCH----HHHHHHHC--C-Ce--EEEEeCC
Confidence 3479999999984 45556655 3 23 9999864
No 175
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=20.78 E-value=3.2e+02 Score=21.69 Aligned_cols=41 Identities=10% Similarity=0.063 Sum_probs=26.5
Q ss_pred HHHHhhhcCCCeeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccC
Q 035867 77 GAIMEAFEGESKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTS 127 (362)
Q Consensus 77 qaIleA~~g~~~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~ 127 (362)
..+++.+-. +.-+|+|+|.|.|. +...|+.+ + .++|+|+.+
T Consensus 37 ~~~l~~~~~-~~~~vLdiG~G~G~----~~~~l~~~-~----~~v~~~D~~ 77 (195)
T 3cgg_A 37 ARLIDAMAP-RGAKILDAGCGQGR----IGGYLSKQ-G----HDVLGTDLD 77 (195)
T ss_dssp HHHHHHHSC-TTCEEEEETCTTTH----HHHHHHHT-T----CEEEEEESC
T ss_pred HHHHHHhcc-CCCeEEEECCCCCH----HHHHHHHC-C----CcEEEEcCC
Confidence 345555532 44589999999875 45556655 2 379999864
No 176
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=20.69 E-value=1.2e+02 Score=26.15 Aligned_cols=43 Identities=14% Similarity=0.134 Sum_probs=25.8
Q ss_pred HHhhhcCCCeeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccC
Q 035867 79 IMEAFEGESKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTS 127 (362)
Q Consensus 79 IleA~~g~~~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~ 127 (362)
++......+.-+|+|+|.+.|.-=..|.+++ ||.-+||+|+.+
T Consensus 48 l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~------~~~~~v~~vD~~ 90 (221)
T 3dr5_A 48 LAATTNGNGSTGAIAITPAAGLVGLYILNGL------ADNTTLTCIDPE 90 (221)
T ss_dssp HHHHSCCTTCCEEEEESTTHHHHHHHHHHHS------CTTSEEEEECSC
T ss_pred HHHhhCCCCCCCEEEEcCCchHHHHHHHHhC------CCCCEEEEEECC
Confidence 3334444445689999998875322333332 234689999864
No 177
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=20.61 E-value=1.6e+02 Score=25.39 Aligned_cols=34 Identities=15% Similarity=0.101 Sum_probs=23.4
Q ss_pred CeeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccC
Q 035867 87 SKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTS 127 (362)
Q Consensus 87 ~~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~ 127 (362)
+.-+|+|+|.|.|.--..|.+.. |..++|||+.+
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~-------~~~~v~gvD~s 98 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATL-------NGWYFLATEVD 98 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHH-------HCCEEEEEESC
T ss_pred CCCEEEEeCCChhHHHHHHHHhC-------CCCeEEEEECC
Confidence 44589999999997444444433 23689999865
No 178
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=20.22 E-value=3.1e+02 Score=22.92 Aligned_cols=35 Identities=17% Similarity=0.027 Sum_probs=23.0
Q ss_pred eeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccCC
Q 035867 88 KLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTSK 128 (362)
Q Consensus 88 ~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~~ 128 (362)
.-+|+|+|.|.|. +...|+..- |+.-++|+|+.+.
T Consensus 70 ~~~vLdiG~G~G~----~~~~la~~~--~~~~~v~~vD~~~ 104 (229)
T 2avd_A 70 AKKALDLGTFTGY----SALALALAL--PADGRVVTCEVDA 104 (229)
T ss_dssp CCEEEEECCTTSH----HHHHHHTTS--CTTCEEEEEESCS
T ss_pred CCEEEEEcCCccH----HHHHHHHhC--CCCCEEEEEECCH
Confidence 3479999998874 334455432 2346899998653
No 179
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=20.21 E-value=3.8e+02 Score=22.34 Aligned_cols=42 Identities=7% Similarity=0.087 Sum_probs=27.1
Q ss_pred HHHHhhhcCCCeeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccC
Q 035867 77 GAIMEAFEGESKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTS 127 (362)
Q Consensus 77 qaIleA~~g~~~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~ 127 (362)
..|++.+.-...-+|+|+|.|.|. +...|+.+. -++|||+.+
T Consensus 60 ~~~~~~~~~~~~~~vLdiG~G~G~----~~~~l~~~~-----~~v~~vD~~ 101 (231)
T 1vbf_A 60 IFMLDELDLHKGQKVLEIGTGIGY----YTALIAEIV-----DKVVSVEIN 101 (231)
T ss_dssp HHHHHHTTCCTTCEEEEECCTTSH----HHHHHHHHS-----SEEEEEESC
T ss_pred HHHHHhcCCCCCCEEEEEcCCCCH----HHHHHHHHc-----CEEEEEeCC
Confidence 345555554455589999999886 333444432 479999864
No 180
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=20.09 E-value=4.1e+02 Score=22.70 Aligned_cols=34 Identities=21% Similarity=0.241 Sum_probs=24.1
Q ss_pred CeeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccC
Q 035867 87 SKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTS 127 (362)
Q Consensus 87 ~~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~ 127 (362)
+.-.|+|+|.|.|. +...||.+. |..++|||+.+
T Consensus 49 ~~~~vLDiGcG~G~----~~~~la~~~---~~~~v~gvD~s 82 (246)
T 2vdv_E 49 KKVTIADIGCGFGG----LMIDLSPAF---PEDLILGMEIR 82 (246)
T ss_dssp CCEEEEEETCTTSH----HHHHHHHHS---TTSEEEEEESC
T ss_pred CCCEEEEEcCCCCH----HHHHHHHhC---CCCCEEEEEcC
Confidence 45689999999986 444455442 45689999865
No 181
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=20.05 E-value=1.6e+02 Score=25.76 Aligned_cols=56 Identities=7% Similarity=0.102 Sum_probs=34.5
Q ss_pred CCchhhhHHHHHHHHHhhhc-CCCeeEEEeccCCCCCCcHHHHHHHhcCCCCCCeeEEEEeccCCC
Q 035867 65 SPWTTFGHVACNGAIMEAFE-GESKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTSKP 129 (362)
Q Consensus 65 ~P~~~fa~~taNqaIleA~~-g~~~VHIIDf~i~~G~QWpsLiq~La~R~~gpP~lrIT~i~~~~~ 129 (362)
.||+.=+.+---+ +|+.+. ..+.-.|+|+|.|.|. +...|+.+ |. -++|||+.+..
T Consensus 15 ~~yvsrg~~kL~~-~L~~~~~~~~g~~VLDiGcGtG~----~t~~la~~--g~--~~V~gvDis~~ 71 (232)
T 3opn_A 15 LRYVSRGGLKLEK-ALKEFHLEINGKTCLDIGSSTGG----FTDVMLQN--GA--KLVYALDVGTN 71 (232)
T ss_dssp CCSSSTTHHHHHH-HHHHTTCCCTTCEEEEETCTTSH----HHHHHHHT--TC--SEEEEECSSCC
T ss_pred CCccCCcHHHHHH-HHHHcCCCCCCCEEEEEccCCCH----HHHHHHhc--CC--CEEEEEcCCHH
Confidence 4666555554333 344443 2334579999999885 56666666 22 28999997654
Done!