Query 035868
Match_columns 370
No_of_seqs 277 out of 1920
Neff 7.7
Searched_HMMs 29240
Date Mon Mar 25 11:51:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/035868.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/035868hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1gp6_A Leucoanthocyanidin diox 100.0 5.7E-86 2E-90 645.0 28.6 338 17-363 3-351 (356)
2 1w9y_A 1-aminocyclopropane-1-c 100.0 9.8E-80 3.3E-84 592.4 24.0 296 58-369 3-306 (319)
3 3oox_A Putative 2OG-Fe(II) oxy 100.0 6.8E-77 2.3E-81 571.6 27.6 289 57-356 5-308 (312)
4 1dcs_A Deacetoxycephalosporin 100.0 3.7E-74 1.3E-78 552.1 18.7 277 57-357 3-305 (311)
5 1odm_A Isopenicillin N synthas 100.0 3.4E-73 1.2E-77 550.0 25.3 282 57-357 7-324 (331)
6 3on7_A Oxidoreductase, iron/as 100.0 2E-68 7E-73 505.0 25.4 262 57-356 2-276 (280)
7 3dkq_A PKHD-type hydroxylase S 95.0 0.074 2.5E-06 48.3 8.5 79 223-319 99-194 (243)
8 2rg4_A Uncharacterized protein 95.0 0.45 1.5E-05 42.2 13.5 43 268-322 166-209 (216)
9 2hbt_A EGL nine homolog 1; pro 92.0 0.44 1.5E-05 43.2 8.0 79 225-319 119-212 (247)
10 3i3q_A Alpha-ketoglutarate-dep 87.9 3.9 0.00013 36.0 10.4 79 224-318 106-201 (211)
11 2jig_A Prolyl-4 hydroxylase; h 87.2 1.9 6.3E-05 38.1 8.0 87 224-320 99-217 (224)
12 3itq_A Prolyl 4-hydroxylase, a 86.3 2.5 8.7E-05 37.3 8.3 85 224-319 112-211 (216)
13 2iuw_A Alkylated repair protei 83.4 4.7 0.00016 36.0 8.8 83 224-318 127-228 (238)
14 3s57_A Alpha-ketoglutarate-dep 82.3 3.9 0.00013 35.6 7.7 80 224-317 101-200 (204)
15 3tht_A Alkylated DNA repair pr 74.4 5.2 0.00018 37.9 6.3 105 223-335 198-327 (345)
16 1m3u_A 3-methyl-2-oxobutanoate 49.3 99 0.0034 27.9 9.7 87 80-185 167-253 (264)
17 1e5r_A Proline oxidase; oxidor 43.6 24 0.00081 32.5 4.6 65 240-318 102-175 (290)
18 2dbn_A Hypothetical protein YB 42.6 8.3 0.00028 37.8 1.4 53 57-113 99-151 (461)
19 2opi_A L-fuculose-1-phosphate 41.2 9.5 0.00033 33.2 1.5 36 58-96 125-160 (212)
20 3rcq_A Aspartyl/asparaginyl be 38.3 35 0.0012 29.4 4.7 67 240-322 113-186 (197)
21 2fk5_A Fuculose-1-phosphate al 36.9 16 0.00056 31.4 2.3 36 58-96 117-153 (200)
22 2irp_A Putative aldolase class 34.9 19 0.00065 31.0 2.4 35 58-96 139-176 (208)
23 4ay7_A Methylcobalamin\: coenz 34.3 57 0.002 30.3 5.9 43 71-113 302-348 (348)
24 1e4c_P L-fuculose 1-phosphate 34.1 14 0.00048 32.1 1.4 36 58-96 122-157 (215)
25 3o2g_A Gamma-butyrobetaine dio 33.6 23 0.0008 33.8 3.0 52 58-114 122-173 (388)
26 3kt7_A PKHD-type hydroxylase T 32.1 92 0.0031 31.7 7.1 83 225-322 126-231 (633)
27 1pvt_A Sugar-phosphate aldolas 31.6 19 0.00063 31.9 1.8 37 57-96 160-196 (238)
28 1o66_A 3-methyl-2-oxobutanoate 30.7 1.8E+02 0.0063 26.2 8.4 86 80-184 167-252 (275)
29 1m5a_B Insulin B chain; alpha 30.7 49 0.0017 19.5 2.9 18 73-90 9-26 (30)
30 2v9l_A Rhamnulose-1-phosphate 28.3 20 0.00069 32.5 1.5 36 58-96 179-214 (274)
31 2vf9_A Coat protein; virion, R 26.4 16 0.00056 27.5 0.4 18 288-305 49-66 (131)
32 1oy0_A Ketopantoate hydroxymet 25.5 2.2E+02 0.0074 25.9 7.9 86 80-184 185-270 (281)
33 2ww6_A Fibritin, T4 fibritin; 24.4 59 0.002 18.5 2.3 14 261-274 11-24 (27)
34 3ocr_A Class II aldolase/adduc 23.4 31 0.001 31.3 1.7 37 58-96 156-192 (273)
35 1otj_A Alpha-ketoglutarate-dep 21.3 93 0.0032 27.7 4.6 50 57-112 16-65 (283)
36 1oih_A Putative alkylsulfatase 21.2 82 0.0028 28.4 4.2 52 57-114 26-78 (301)
No 1
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A*
Probab=100.00 E-value=5.7e-86 Score=644.99 Aligned_cols=338 Identities=30% Similarity=0.544 Sum_probs=299.6
Q ss_pred ccccHHHHHHCCCCCCCCCCCCCCCCCCccccc--cccCCCCCCCceeeCCCCCC--C-ChHHHHHHHHHHHHHcCeEEE
Q 035868 17 YQKGVKNLCENGVTKVPKKYILPEFDRADEVLQ--VDLTMPNLKLPVIDFSELQG--P-NRSEVLKSLTSACEKYGFFQV 91 (370)
Q Consensus 17 ~~~~v~~l~~~~~~~vp~~y~~~~~~~~~~~~~--~~~~~~~~~iPvIDls~l~~--~-~~~~~~~~l~~A~~~~GfF~v 91 (370)
++++||+|+++|+.+||++|++|+++++..... ........+||||||+.|.+ + .+.+++++|.+||++||||||
T Consensus 3 ~~~~v~~l~~~~~~~vP~~~~~p~~~~~~~~~~~~~~~~~~~~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFF~v 82 (356)
T 1gp6_A 3 AVERVESLAKSGIISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENCIEELKKASLDWGVMHL 82 (356)
T ss_dssp CCCCHHHHHHTTCSSCCGGGSCCHHHHTTCCCHHHHHHCCCSCCCCEEECTTTTCSCHHHHHHHHHHHHHHHHHTSEEEE
T ss_pred CcccHHHHHhcCCCCCCHHhcCCchhcccccccccccccccCCCCCEEEchhccCCChHHHHHHHHHHHHHHHhCCEEEE
Confidence 567899999999999999999998877653210 00000014699999999863 2 367799999999999999999
Q ss_pred EeCCCChHHHHHHHHHhhhhhCCCHHHHhhhccCCC-CCCeecccccCCCCCcccccccccccccCCCC-CccCCCCCCc
Q 035868 92 VNHGIPNNVISSMIDVSARFFELPIEVRSKYMSSDL-TAPVRYGTSFNQNKDRVFCWRDFLKLVCHPSQ-DVLVHWPSYP 169 (370)
Q Consensus 92 ~nHGv~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~-~~~~Gy~~~~~~~~~~~~dw~e~~~~~~~p~~-~~~~~WP~~~ 169 (370)
+||||+.++++++++.+++||+||.|+|+++..... ..+.||+........+..||+|.|.+...|.. ...+.||+.+
T Consensus 83 ~nHGi~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~~~Gy~~~~~~~~~~~~d~kE~~~~~~~p~~~~~~~~wP~~~ 162 (356)
T 1gp6_A 83 INHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTP 162 (356)
T ss_dssp ESCSCCHHHHHHHHHHHHHHHTSCHHHHGGGBCBGGGTBCSEEECCCCCSTTCCCCSCEEEEEEEESGGGCCGGGSCCSS
T ss_pred eCCCCCHHHHHHHHHHHHHHHCCCHHHHHhhcccccccCccccCcCcccCCCCCCChhheeeeecCCccccccccCCCcc
Confidence 999999999999999999999999999999965544 46789987655455668899999998776643 3468999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcchHHHHHHHhcc---CCCcceEeeecCCCCCCCCccccCCcc
Q 035868 170 TDMRRLAVTYAKEIKNLFVMLMEAILESLGLWGATMNMTEEVEKLIKQFQ---DGSQQMVVNCYPPCPEPHLTLGMPPHS 246 (370)
Q Consensus 170 ~~fr~~~~~y~~~~~~l~~~ll~~l~~~Lgl~~~~~~~~~~~~~l~~~~~---~~~~~lr~~~YPp~~~~~~~~g~~~Ht 246 (370)
+.||+.+++|+++|.+|+.+||++|+++|||+++ +|.+.+. ...+.||+||||||++|+.++|+++||
T Consensus 163 ~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~---------~f~~~~~~~~~~~~~lrl~~YPp~~~~~~~~g~~~Ht 233 (356)
T 1gp6_A 163 SDYIEATSEYAKCLRLLATKVFKALSVGLGLEPD---------RLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHT 233 (356)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTT---------HHHHHTTHHHHCEEEEEEEEECCCSSTTTCCSEEEEC
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCHH---------HHHHHhcccCCccceeeeeecCCCCCcccccCcCCcc
Confidence 9999999999999999999999999999999999 9998886 466789999999999999999999999
Q ss_pred ccCCeeEEeeCCCCCeeEEeCCeEEEecCCCCeEEEEeCcchhhhhCCccccccceeecCCCCCeEEEEEeecCCCCC-e
Q 035868 247 DYGFLTLLLQDDVEGLQIQYKEKWVAVQPLASSFVVNVGDHLEIFSNGKYRSVLHRVLVNPAKSRISVASLHSLPFNS-M 325 (370)
Q Consensus 247 D~g~lTlL~qd~v~GLqV~~~g~W~~V~p~pgalvVNvGD~Lq~~SnG~~kS~~HRVv~~~~~~R~Si~~F~~P~~d~-~ 325 (370)
|+|+||||+||+++||||+++|+|++|+|+||+|||||||+||+||||+|||++|||+++++++|||++||++|+.|+ +
T Consensus 234 D~g~lTlL~qd~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~l~~~TnG~~kS~~HRVv~~~~~~R~Sia~F~~P~~d~~~ 313 (356)
T 1gp6_A 234 DVSALTFILHNMVPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIV 313 (356)
T ss_dssp CCSSEEEEEECSCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEECCCSSCCEEEEEEEEECCTTTCE
T ss_pred CCCeEEEEEEcCCCCeEEecCCcEEECcCCCCeEEEEeccHHHHhcCCEeeccCceecCCCCCCEEEEEEeecCCCCCcE
Confidence 999999999999999999999999999999999999999999999999999999999999889999999999999999 9
Q ss_pred eeCCccccCCCCCCCCCCccHHHHHHHHHhcCCCCCcc
Q 035868 326 VSPSPSLINKANPRRYKDTDFACFLEYISSFEPKRKNF 363 (370)
Q Consensus 326 i~P~~~lv~~~~p~~y~~~~~~ey~~~~~~~~~~~~~~ 363 (370)
|+|+++|+++++|++|+++||+||+..++++++++|..
T Consensus 314 i~pl~~~~~~~~p~~y~~~t~~eyl~~~~~~~~d~~~~ 351 (356)
T 1gp6_A 314 LKPLPEMVSVESPAKFPPRTFAQHIEHKLFGKEQEELV 351 (356)
T ss_dssp ECCCGGGCCSSSCCSSCCEEHHHHHHHHHHHHHHHHC-
T ss_pred EeCChhhcCCCCCccCCCccHHHHHHHHHHhccCcchh
Confidence 99999999999999999999999999988887777644
No 2
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X
Probab=100.00 E-value=9.8e-80 Score=592.40 Aligned_cols=296 Identities=30% Similarity=0.565 Sum_probs=263.9
Q ss_pred CCceeeCCCCCCCChHHHHHHHHHHHHHcCeEEEEeCCCChHHHHHHHHHhhhhhCCCHHHHhhhccCCCCCCeeccccc
Q 035868 58 KLPVIDFSELQGPNRSEVLKSLTSACEKYGFFQVVNHGIPNNVISSMIDVSARFFELPIEVRSKYMSSDLTAPVRYGTSF 137 (370)
Q Consensus 58 ~iPvIDls~l~~~~~~~~~~~l~~A~~~~GfF~v~nHGv~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~~Gy~~~~ 137 (370)
+||||||+.+....+.+++++|.+||++||||||+|||||.++++++++.+++||+||.|+|+++... ..||+..
T Consensus 3 ~iPvIDls~l~~~~~~~~~~~l~~A~~~~GFF~v~nHGi~~~l~~~~~~~~~~FF~lP~e~K~~~~~~----~~Gy~~~- 77 (319)
T 1w9y_A 3 NFPIISLDKVNGVERAATMEMIKDACENWGFFELVNHGIPREVMDTVEKMTKGHYKKCMEQRFKELVA----SKALEGV- 77 (319)
T ss_dssp CCCEEEGGGGGSTTHHHHHHHHHHHHHHTSEEEEESCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHTTC-
T ss_pred CCCEEECcccCcccHHHHHHHHHHHHHhCCEEEEEcCCCCHHHHHHHHHHHHHHHcCCHHHHhhhccC----CCCCCcc-
Confidence 59999999875326888999999999999999999999999999999999999999999999998532 2377543
Q ss_pred CCCCCcccccccccccccCCCCCccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcchHHHHHHHh
Q 035868 138 NQNKDRVFCWRDFLKLVCHPSQDVLVHWPSYPTDMRRLAVTYAKEIKNLFVMLMEAILESLGLWGATMNMTEEVEKLIKQ 217 (370)
Q Consensus 138 ~~~~~~~~dw~e~~~~~~~p~~~~~~~WP~~~~~fr~~~~~y~~~~~~l~~~ll~~l~~~Lgl~~~~~~~~~~~~~l~~~ 217 (370)
....+..||+|.|.+...|. ...+.||+.++.||+.+++|+++|.+|+.+||++|+++|||+++ +|.+.
T Consensus 78 -~~e~~~~d~ke~~~~~~~p~-~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~---------~f~~~ 146 (319)
T 1w9y_A 78 -QAEVTDMDWESTFFLKHLPI-SNISEVPDLDEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKG---------YLKNA 146 (319)
T ss_dssp -CCCGGGCCCCEEEEEEEESC-CGGGGCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTT---------HHHHH
T ss_pred -cccCCCCChhhheeeecCCc-ccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHH---------HHHHH
Confidence 22346789999999877664 34688999999999999999999999999999999999999999 99888
Q ss_pred ccC---CCcceEeeecCCCCCCCCccccCCccccCCeeEEeeC-CCCCeeEEeCCeEEEecCCCCeEEEEeCcchhhhhC
Q 035868 218 FQD---GSQQMVVNCYPPCPEPHLTLGMPPHSDYGFLTLLLQD-DVEGLQIQYKEKWVAVQPLASSFVVNVGDHLEIFSN 293 (370)
Q Consensus 218 ~~~---~~~~lr~~~YPp~~~~~~~~g~~~HtD~g~lTlL~qd-~v~GLqV~~~g~W~~V~p~pgalvVNvGD~Lq~~Sn 293 (370)
+.+ ..+.||+||||||++|+.++|+++|||+|+||||+|| +++||||+++|+|++|+|+||+|||||||+||+|||
T Consensus 147 ~~~~~~~~~~lrl~~YPp~~~~~~~~g~~~HtD~g~lTlL~qd~~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~l~~~Sn 226 (319)
T 1w9y_A 147 FYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVVNLGDQLEVITN 226 (319)
T ss_dssp HHTTTCCEEEEEEEECCCCSCGGGGSSCCCBCCSSSEEEEEESSSCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTT
T ss_pred hcCcCCccceeEEEecCCCcccccccccccccCCCceEEEEecCCCCeeeEeeCCeEEEcccCCCcEEEEhHHHHHHHhC
Confidence 753 4568999999999999999999999999999999995 799999999999999999999999999999999999
Q ss_pred CccccccceeecCCCCCeEEEEEeecCCCCCeeeCCccccCCC---CCCCCCCccHHHHHHHHHhcCCCCCcc-cccccC
Q 035868 294 GKYRSVLHRVLVNPAKSRISVASLHSLPFNSMVSPSPSLINKA---NPRRYKDTDFACFLEYISSFEPKRKNF-LESRKL 369 (370)
Q Consensus 294 G~~kS~~HRVv~~~~~~R~Si~~F~~P~~d~~i~P~~~lv~~~---~p~~y~~~~~~ey~~~~~~~~~~~~~~-l~~~~~ 369 (370)
|+|||++|||+++++++|||++||++|+.|++|.|+++|++++ +|++|+++||+||+..++++++.++.. ++.+|+
T Consensus 227 G~~kS~~HRVv~~~~~~R~Sia~F~~p~~d~~i~pl~~l~~~~~~~~p~~Y~~~t~~ey~~~~~~~~~~~~~~~~~~~~~ 306 (319)
T 1w9y_A 227 GKYKSVMHRVIAQKDGARMSLASFYNPGSDAVIYPAPALVEKEAEENKQVYPKFVFDDYMKLYAGLKFQAKEPRFEAMKA 306 (319)
T ss_dssp TSSCCCCEEECCCSSSCCEEEEEEEECCTTCEECCCGGGC--------CCCCCEEHHHHHHTTTTTTCSSHHHHHHHHHH
T ss_pred CeeecccceecCCCCCCceEEEEEecCCCCCeEeCchhhcCcccccCccccCcEeHHHHHHHHHhhhcCcchhHHHHHHH
Confidence 9999999999999889999999999999999999999999987 599999999999999999999888864 676664
No 3
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15}
Probab=100.00 E-value=6.8e-77 Score=571.62 Aligned_cols=289 Identities=21% Similarity=0.334 Sum_probs=254.7
Q ss_pred CCCceeeCCCCCCCChHHHHHHHHHHHHHcCeEEEEeCCCChHHHHHHHHHhhhhhCCCHHHHhhhccCCCCCCeecccc
Q 035868 57 LKLPVIDFSELQGPNRSEVLKSLTSACEKYGFFQVVNHGIPNNVISSMIDVSARFFELPIEVRSKYMSSDLTAPVRYGTS 136 (370)
Q Consensus 57 ~~iPvIDls~l~~~~~~~~~~~l~~A~~~~GfF~v~nHGv~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~~Gy~~~ 136 (370)
.+||||||+.+.+ ++.+++++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++... .....||...
T Consensus 5 ~~iPvIDls~~~~-~~~~~~~~l~~A~~~~GFf~v~nHGi~~~~~~~~~~~~~~fF~lP~e~K~~~~~~-~~~~~Gy~~~ 82 (312)
T 3oox_A 5 SAIDPVSFSLYAK-DFTRFAQELGASFERYGFAVLSDYDLDQARIDAAVDSAKAFFALPVETKKQYAGV-KGGARGYIPF 82 (312)
T ss_dssp CSSCCEETHHHHH-CHHHHHHHHHHHHHHHSEEEEESCCSCHHHHHHHHHHHHHHHTSCHHHHGGGBSS-GGGTSEEECC
T ss_pred CCCCeEEChHhcc-cHHHHHHHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHhhhccC-CCCccccccc
Confidence 5799999997643 6788999999999999999999999999999999999999999999999999654 4456788432
Q ss_pred cCC--CCCcccccccccccccC-CCC------CccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCc
Q 035868 137 FNQ--NKDRVFCWRDFLKLVCH-PSQ------DVLVHWPSYPTDMRRLAVTYAKEIKNLFVMLMEAILESLGLWGATMNM 207 (370)
Q Consensus 137 ~~~--~~~~~~dw~e~~~~~~~-p~~------~~~~~WP~~~~~fr~~~~~y~~~~~~l~~~ll~~l~~~Lgl~~~~~~~ 207 (370)
... ......||+|.|.+... +.. ..+|.||+.++.||+.+++|+++|.+|+.+||++|+++|||+++
T Consensus 83 g~e~~~~~~~~D~kE~~~~~~~~~~~~~~~~~~~~n~wP~~~p~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~---- 158 (312)
T 3oox_A 83 GVETAKGADHYDLKEFWHMGRDLPPGHRFRAHMADNVWPAEIPAFKHDVSWLYNSLDGMGGKVLEAIATYLKLERD---- 158 (312)
T ss_dssp CCCCSTTSCSCCCCEEEEECCCCCTTCGGGGTSCCCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTT----
T ss_pred cceecCCCCCCCceeeeEeecCCCcCCcchhccCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHH----
Confidence 111 12346899999987542 211 12589999999999999999999999999999999999999999
Q ss_pred chHHHHHHHhccCCCcceEeeecCCCCCCCCccccCCccccCCeeEEeeCCCCCeeEEe-CCeEEEecCCCCeEEEEeCc
Q 035868 208 TEEVEKLIKQFQDGSQQMVVNCYPPCPEPHLTLGMPPHSDYGFLTLLLQDDVEGLQIQY-KEKWVAVQPLASSFVVNVGD 286 (370)
Q Consensus 208 ~~~~~~l~~~~~~~~~~lr~~~YPp~~~~~~~~g~~~HtD~g~lTlL~qd~v~GLqV~~-~g~W~~V~p~pgalvVNvGD 286 (370)
+|.+.+..+.+.||+||||||+.++..+|+++|||+|+||||+||+++||||+. +|+|++|+|+||+|||||||
T Consensus 159 -----~f~~~~~~~~~~lr~~~Ypp~~~~~~~~g~~~HtD~g~lTlL~qd~v~GLqV~~~~g~W~~V~p~pg~~vVNiGD 233 (312)
T 3oox_A 159 -----FFKPTVQDGNSVLRLLHYPPIPKDATGVRAGAHGDINTITLLLGAEEGGLEVLDRDGQWLPINPPPGCLVINIGD 233 (312)
T ss_dssp -----TTHHHHTTCCCEEEEEEECCCSSCCC--CEEEECCCSSEEEEECCTTSCEEEECTTSCEEECCCCSSCEEEEECH
T ss_pred -----HHHHHhcCCcceeeeEecCCCCCCcCCcCccceecCceEEEEeEcCcCceEEECCCCcEEECCCCCCeEEEEhHH
Confidence 888888877789999999999987666999999999999999999999999975 89999999999999999999
Q ss_pred chhhhhCCccccccceeecCC----CCCeEEEEEeecCCCCCeeeCCccccCCCCCCCCC-CccHHHHHHHHHhc
Q 035868 287 HLEIFSNGKYRSVLHRVLVNP----AKSRISVASLHSLPFNSMVSPSPSLINKANPRRYK-DTDFACFLEYISSF 356 (370)
Q Consensus 287 ~Lq~~SnG~~kS~~HRVv~~~----~~~R~Si~~F~~P~~d~~i~P~~~lv~~~~p~~y~-~~~~~ey~~~~~~~ 356 (370)
+||+||||+|||++|||+.++ ..+|||++||++|+.|++|+|+++|+++++|++|+ ++|++||+..+++.
T Consensus 234 ~l~~~TnG~~kS~~HRVv~~~~~~~~~~R~Sia~F~~P~~d~~i~pl~~~v~~~~p~~y~~~~t~~eyl~~r~~~ 308 (312)
T 3oox_A 234 MLERLTNNVLPSTVHRVVNPPPERRGVPRYSTPFFLHFASDYEIKTLQNCVTAENPDRYPESITADEFLQQRLRE 308 (312)
T ss_dssp HHHHHTTTSSCCCCEEECCCCGGGTTSCEEECCEEECCCTTCEECCCGGGCCSSSCCSCSSCEEHHHHHHHHHHH
T ss_pred HHHHHhCCeecCCCceEeCCCccCCCCCEEEEEEEecCCCCcEEecCccccCCCCcccCCCCeeHHHHHHHHHHH
Confidence 999999999999999998653 45799999999999999999999999999999999 99999999987753
No 4
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A*
Probab=100.00 E-value=3.7e-74 Score=552.11 Aligned_cols=277 Identities=17% Similarity=0.185 Sum_probs=234.4
Q ss_pred CCCceeeCCCCCCCChHHHHHHHHHHHHHcCeEEEEeCCCChHHHHHHHHHhhhhhCCC-HHHHhhhccCCCCCCeeccc
Q 035868 57 LKLPVIDFSELQGPNRSEVLKSLTSACEKYGFFQVVNHGIPNNVISSMIDVSARFFELP-IEVRSKYMSSDLTAPVRYGT 135 (370)
Q Consensus 57 ~~iPvIDls~l~~~~~~~~~~~l~~A~~~~GfF~v~nHGv~~~l~~~~~~~~~~FF~lP-~eeK~~~~~~~~~~~~Gy~~ 135 (370)
.+||||||+.+.+.... ++|.+||++||||||+|||||.++++++++++++||+|| .|+|+++.........||+.
T Consensus 3 ~~iPvIDls~l~~~~~~---~~l~~A~~~~GFf~l~nHGi~~~l~~~~~~~~~~fF~lP~~e~K~~~~~~~~~~~~Gy~~ 79 (311)
T 1dcs_A 3 TTVPTFSLAELQQGLHQ---DEFRRCLRDKGLFYLTDCGLTDTELKSAKDLVIDFFEHGSEAEKRAVTSPVPTMRRGFTG 79 (311)
T ss_dssp CCCCEEEHHHHHTTCSH---HHHHHHHHHTCEEEEESSSCCHHHHHHHHHHHHHHHHHCCHHHHHHTBCSSCCSSSEEEE
T ss_pred CCCcEEEchhhcCCCHH---HHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHcCCcHHHhHHhhccCCCCCCceee
Confidence 46999999977432222 399999999999999999999999999999999999999 99999997655556789975
Q ss_pred ccCC------CCCcccccccccccccCCCCCccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCC----CCCCC
Q 035868 136 SFNQ------NKDRVFCWRDFLKLVCHPSQDVLVHWPSYPTDMRRLAVTYAKEIKNLFVMLMEAILESLGL----WGATM 205 (370)
Q Consensus 136 ~~~~------~~~~~~dw~e~~~~~~~p~~~~~~~WP~~~~~fr~~~~~y~~~~~~l~~~ll~~l~~~Lgl----~~~~~ 205 (370)
.... ...+..||+|.|.+... +|.|| ++.||+.+++|+++|.+|+.+||++|+++||| +++
T Consensus 80 ~~~e~~~~~~~~~~~~d~~E~~~~~~~-----~n~wP--~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~-- 150 (311)
T 1dcs_A 80 LESESTAQITNTGSYSDYSMCYSMGTA-----DNLFP--SGDFERIWTQYFDRQYTASRAVAREVLRATGTEPDGGVE-- 150 (311)
T ss_dssp C-----------------CEEEEECSS-----SCCCS--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCTTCHH--
T ss_pred ccccccccccCCCCCCCcceeeeccCC-----CCCCC--ChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcCcHh--
Confidence 4322 22467899999998654 47899 89999999999999999999999999999999 555
Q ss_pred CcchHHHHHHHhccCCCcceEeeecCCCCCCC--C--ccccCCccccCCeeEEeeC-CCCC---eeEEeCCeEEEecCCC
Q 035868 206 NMTEEVEKLIKQFQDGSQQMVVNCYPPCPEPH--L--TLGMPPHSDYGFLTLLLQD-DVEG---LQIQYKEKWVAVQPLA 277 (370)
Q Consensus 206 ~~~~~~~~l~~~~~~~~~~lr~~~YPp~~~~~--~--~~g~~~HtD~g~lTlL~qd-~v~G---LqV~~~g~W~~V~p~p 277 (370)
+|.+. .+.||+||||||++++ . .+|+++|||+|+||||+|| +++| |||+++|+|++|+|+|
T Consensus 151 -------~f~~~----~~~lrl~~YPp~~~~~~~~~~~~g~~~HtD~g~lTlL~qd~~v~G~~~LqV~~~g~W~~V~p~p 219 (311)
T 1dcs_A 151 -------AFLDC----EPLLRFRYFPQVPEHRSAEEQPLRMAPHYDLSMVTLIQQTPCANGFVSLQAEVGGAFTDLPYRP 219 (311)
T ss_dssp -------HHHSC----CCEEEEEEECC-----------CCEEEEEECSSEEEEEEECCTTCCCCEEEEETTEEEECCCCT
T ss_pred -------HHhhc----chhhheecCCCCCcccccCccccccccccCCCeEEEEecCCCCCCceeEEEEeCCEEEeCcCCC
Confidence 66654 6789999999999874 3 6889999999999999999 8999 9999999999999999
Q ss_pred CeEEEEeCcchhhhhCCccccccceeecCC-----CCCeEEEEEeecCCCCCeeeCCccccCCCCCCCC--CCccHHHHH
Q 035868 278 SSFVVNVGDHLEIFSNGKYRSVLHRVLVNP-----AKSRISVASLHSLPFNSMVSPSPSLINKANPRRY--KDTDFACFL 350 (370)
Q Consensus 278 galvVNvGD~Lq~~SnG~~kS~~HRVv~~~-----~~~R~Si~~F~~P~~d~~i~P~~~lv~~~~p~~y--~~~~~~ey~ 350 (370)
|+|||||||+||+||||+|||++|||++++ .++|||++||++|+.|++|. +++++++++|++| +++||+||+
T Consensus 220 g~lvVNiGD~l~~~TnG~~kS~~HRVv~~~~~~~~~~~R~Si~~F~~p~~d~~i~-l~~~~~~~~p~~y~~~~~t~~ey~ 298 (311)
T 1dcs_A 220 DAVLVFCGAIATLVTGGQVKAPRHHVAAPRRDQIAGSSRTSSVFFLRPNADFTFS-VPLARECGFDVSLDGETATFQDWI 298 (311)
T ss_dssp TCEEEEECHHHHHHTTSCSCCCCEEECCC----CTTCCEEEEEEEECCCTTCEEE-HHHHHHTTCCCCCCSSEEEHHHHH
T ss_pred CeEEEEHHHHHHHHhCCcccCCCceEeCCCcccCCCCCeEEEEEEEcCCCCcEEe-CCcccCCCCccccCCCCccHHHHH
Confidence 999999999999999999999999999987 67999999999999999999 9999998899999 999999999
Q ss_pred HHHHhcC
Q 035868 351 EYISSFE 357 (370)
Q Consensus 351 ~~~~~~~ 357 (370)
..++++.
T Consensus 299 ~~~~~~~ 305 (311)
T 1dcs_A 299 GGNYVNI 305 (311)
T ss_dssp CSSCCCE
T ss_pred HHHHHHH
Confidence 8766543
No 5
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ...
Probab=100.00 E-value=3.4e-73 Score=550.01 Aligned_cols=282 Identities=19% Similarity=0.275 Sum_probs=249.3
Q ss_pred CCCceeeCCCCCC--C-ChHHHHHHHHHHHHHcCeEEEEeCCCChHHHHHHHHHhhhh-hCCCHHHHhhhccCCCCCCee
Q 035868 57 LKLPVIDFSELQG--P-NRSEVLKSLTSACEKYGFFQVVNHGIPNNVISSMIDVSARF-FELPIEVRSKYMSSDLTAPVR 132 (370)
Q Consensus 57 ~~iPvIDls~l~~--~-~~~~~~~~l~~A~~~~GfF~v~nHGv~~~l~~~~~~~~~~F-F~lP~eeK~~~~~~~~~~~~G 132 (370)
.+||||||+.|.+ + .+.+++++|.+||++||||||+|||| +++++++.+++| |+||.|+|+++.. .++.+
T Consensus 7 ~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFf~v~nHGi---l~~~~~~~~~~F~F~lP~eeK~~~~~---~Gy~~ 80 (331)
T 1odm_A 7 ANVPKIDVSPLFGDDQAAKMRVAQQIDAASRDTGFFYAVNHGI---NVQRLSQKTKEFHMSITPEEKWDLAI---RAYNK 80 (331)
T ss_dssp CCCCEEECGGGGSSCHHHHHHHHHHHHHHHHTTSEEEEESCCC---CHHHHHHHHHHHHHHCCHHHHHHHBC---TTTCT
T ss_pred CCCCEEEchHhcCCChHHHHHHHHHHHHHHHhCCEEEEEccce---eHHHHHHHHHhccCCCCHHHHHhhhh---cCCCc
Confidence 5699999998752 2 46679999999999999999999999 899999999999 9999999999954 23333
Q ss_pred cccccCCCC------CcccccccccccccCCC-----------CCccCCCCCC--chhHHHHHHHHHHHHHHHHHHHHHH
Q 035868 133 YGTSFNQNK------DRVFCWRDFLKLVCHPS-----------QDVLVHWPSY--PTDMRRLAVTYAKEIKNLFVMLMEA 193 (370)
Q Consensus 133 y~~~~~~~~------~~~~dw~e~~~~~~~p~-----------~~~~~~WP~~--~~~fr~~~~~y~~~~~~l~~~ll~~ 193 (370)
++... ... .+..||+|.|.+...+. ...+|.||+. +++||+.+++|+++|.+|+.+||++
T Consensus 81 ~~~e~-~~~~~~~~~~~~~d~kE~~~~~~~~~~~~p~~~~~~~~~~~n~wP~~~~~p~fr~~~~~y~~~~~~l~~~ll~~ 159 (331)
T 1odm_A 81 EHQDQ-VRAGYYLSIPGKKAVESFCYLNPNFTPDHPRIQAKTPTHEVNVWPDETKHPGFQDFAEQYYWDVFGLSSALLKG 159 (331)
T ss_dssp TCTTC-SSSEEECCBTTTBCCEEEEECCTTCCTTSHHHHTTCTTCCCCCCCCTTTSTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCccc-cccccccccCCCCChhheEecccCCccccccccccccccCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33321 111 25789999998875321 1236899987 8999999999999999999999999
Q ss_pred HHHhcCCCCCCCCcchHHHHHHHhccCCCcceE--eeecC------C---CCCCCC-ccccCCccccCCeeEEeeCCCCC
Q 035868 194 ILESLGLWGATMNMTEEVEKLIKQFQDGSQQMV--VNCYP------P---CPEPHL-TLGMPPHSDYGFLTLLLQDDVEG 261 (370)
Q Consensus 194 l~~~Lgl~~~~~~~~~~~~~l~~~~~~~~~~lr--~~~YP------p---~~~~~~-~~g~~~HtD~g~lTlL~qd~v~G 261 (370)
|+++|||+++ +|.+.+..+.+.|| +|||| | |++|+. .+|+++|||+|+||||+||+++|
T Consensus 160 la~~Lgl~~~---------~f~~~~~~~~~~lr~~l~~YP~~~~~~p~~~~~~~~~~~~g~~~HtD~g~lTlL~qd~v~G 230 (331)
T 1odm_A 160 YALALGKEEN---------FFARHFKPDDTLASVVLIRYPYLDPYPEAAIKTAADGTKLSFEWHEDVSLITVLYQSNVQN 230 (331)
T ss_dssp HHHHTTSCTT---------TTGGGCCTTTCCCEEEEEEECCCSSCCGGGCEECTTSCEEEEEEECCSSSEEEEEECSSCC
T ss_pred HHHHhCCCHH---------HHHHHhcCcHHHHHHHHhhCCCcccccccccCCCccccccccccccCCCeEEEEeeCCCCC
Confidence 9999999999 88888887788999 99999 8 998887 89999999999999999999999
Q ss_pred eeEEe-CCeEEEecCCCCeEEEEeCcchhhhhCCccccccceeecCCCCCeEEEEEeecCCCCCeeeCCccccCCCCCCC
Q 035868 262 LQIQY-KEKWVAVQPLASSFVVNVGDHLEIFSNGKYRSVLHRVLVNPAKSRISVASLHSLPFNSMVSPSPSLINKANPRR 340 (370)
Q Consensus 262 LqV~~-~g~W~~V~p~pgalvVNvGD~Lq~~SnG~~kS~~HRVv~~~~~~R~Si~~F~~P~~d~~i~P~~~lv~~~~p~~ 340 (370)
|||+. +| |++|+|+||+|||||||+||+||||+|||++|||+. +.++|||++||++|+.|++|.|+++++++++ ++
T Consensus 231 LQV~~~~g-Wi~V~p~pgalvVNiGD~l~~~TnG~~kS~~HRVv~-~~~~R~Sia~F~~P~~d~~i~pl~~~~~~~~-~~ 307 (331)
T 1odm_A 231 LQVETAAG-YQDIEADDTGYLINCGSYMAHLTNNYYKAPIHRVKW-VNAERQSLPFFVNLGYDSVIDPFDPREPNGK-SD 307 (331)
T ss_dssp EEEEETTE-EEECCCCTTSEEEEECHHHHHHTTTSSCCCCEEEEC-CCSCEEEEEEEECCCTTCBCCCCCTTSTTCC-CS
T ss_pred EEEEcCCC-eEECCCCCCeEEEEccHHHHHHhCCEeeCCCceeCC-CCCCEEEEEEEEcCCCCCEEeCCCccccccc-cC
Confidence 99994 88 999999999999999999999999999999999985 5789999999999999999999999999877 89
Q ss_pred CCCccHHHHHHHHHhcC
Q 035868 341 YKDTDFACFLEYISSFE 357 (370)
Q Consensus 341 y~~~~~~ey~~~~~~~~ 357 (370)
|+++||+||+..++++.
T Consensus 308 y~~~t~~e~l~~~~~~~ 324 (331)
T 1odm_A 308 REPLSYGDYLQNGLVSL 324 (331)
T ss_dssp SCCCBHHHHHHHHHHHH
T ss_pred CCCccHHHHHHHHHHHH
Confidence 99999999999877654
No 6
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis}
Probab=100.00 E-value=2e-68 Score=504.95 Aligned_cols=262 Identities=20% Similarity=0.285 Sum_probs=222.3
Q ss_pred CCCceeeCCCCCCCChHHHHHHHHHHHHHcCeEEEEeCCCChHHHHHHHHHhhhhhCCCHHHHhhhccCCCCCCeecccc
Q 035868 57 LKLPVIDFSELQGPNRSEVLKSLTSACEKYGFFQVVNHGIPNNVISSMIDVSARFFELPIEVRSKYMSSDLTAPVRYGTS 136 (370)
Q Consensus 57 ~~iPvIDls~l~~~~~~~~~~~l~~A~~~~GfF~v~nHGv~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~~Gy~~~ 136 (370)
.+||||||+.. +++++|.+||++||||||+|||||.++++++++.+++||+| |+|+++.. ++....||+..
T Consensus 2 ~~IPvIDls~~------~~~~~l~~A~~~~GFF~v~nHGi~~~li~~~~~~~~~FF~l--e~K~k~~~-~~~~~~GY~~~ 72 (280)
T 3on7_A 2 MKLETIDYRAA------DSAKRFVESLRETGFGVLSNHPIDKELVERIYTEWQAFFNS--EAKNEFMF-NRETHDGFFPA 72 (280)
T ss_dssp --CCEEETTST------THHHHHHHHHHHHSEEEEESCSSCHHHHHHHHHHHHHHHTS--GGGGGGBC-CTTTCCEEECC
T ss_pred CCCCEEECCCh------hHHHHHHHHHHhCCEEEEECCCCCHHHHHHHHHHHHHHhhh--HHHHHhcc-CCCCCCccccC
Confidence 46999999963 35799999999999999999999999999999999999998 89999854 34567899643
Q ss_pred c-C--CCCCcccccccccccccCCCCCccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC--CCCCcchHH
Q 035868 137 F-N--QNKDRVFCWRDFLKLVCHPSQDVLVHWPSYPTDMRRLAVTYAKEIKNLFVMLMEAILESLGLWG--ATMNMTEEV 211 (370)
Q Consensus 137 ~-~--~~~~~~~dw~e~~~~~~~p~~~~~~~WP~~~~~fr~~~~~y~~~~~~l~~~ll~~l~~~Lgl~~--~~~~~~~~~ 211 (370)
. . .......||+|.|.+. .||..|+.||+.+++|+++|.+|+.+||++|+++||++. +. .+
T Consensus 73 ~~~e~~~~~~~~D~kE~~~~~---------p~~~~p~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~--~~--- 138 (280)
T 3on7_A 73 SISETAKGHTVKDIKEYYHVY---------PWGRIPDSLRANILAYYEKANTLASELLEWIETYSPDEIKAKF--SI--- 138 (280)
T ss_dssp C--------CCCCSCEEEEEC---------TTSCCCGGGHHHHHHHHHHHHHHHHHHHHHHHHTSCHHHHTTC--SS---
T ss_pred ccccccCCCCcccHHHHHhcC---------CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcchhhh--hH---
Confidence 2 1 1123467999998762 378888999999999999999999999999999999762 20 00
Q ss_pred HHHHHhccCCC-cceEeeecCCCCCCC--CccccCCccccCCeeEEeeCCCCCeeEEe-CCeEEEecCCCCeEEEEeCcc
Q 035868 212 EKLIKQFQDGS-QQMVVNCYPPCPEPH--LTLGMPPHSDYGFLTLLLQDDVEGLQIQY-KEKWVAVQPLASSFVVNVGDH 287 (370)
Q Consensus 212 ~~l~~~~~~~~-~~lr~~~YPp~~~~~--~~~g~~~HtD~g~lTlL~qd~v~GLqV~~-~g~W~~V~p~pgalvVNvGD~ 287 (370)
.|.+.+.... +.||+||||||+.++ ..+|+++|||+|+||||+||+++||||+. +|+|++|+|+||++||||||+
T Consensus 139 -~~~~~~~~~~~~~lr~~~YP~~~~~~~~~~~g~~~HtD~g~lTlL~qd~~~GLqV~~~~g~W~~V~p~pg~~vVNiGD~ 217 (280)
T 3on7_A 139 -PLPEMIANSHKTLLRILHYPPMTGDEEMGAIRAAAHEDINLITVLPTANEPGLQVKAKDGSWLDVPSDFGNIIINIGDM 217 (280)
T ss_dssp -CHHHHHTTCSSCEEEEEEECCCCTTCCCCSEEEEEECCCSSEEEEECCSCCCEEEECTTSCEEECCCCTTCEEEEECHH
T ss_pred -HHHHHhcCCccceEEEEECCCCCCccccCcccccCCCCCCeEEEEEecCCCCeEEEcCCCCEEECcCCCCEEEEEcChH
Confidence 2555555443 789999999999765 47999999999999999999999999995 899999999999999999999
Q ss_pred hhhhhCCccccccceeecCC----CCCeEEEEEeecCCCCCeeeCCccccCCCCCCCCCCccHHHHHHHHHhc
Q 035868 288 LEIFSNGKYRSVLHRVLVNP----AKSRISVASLHSLPFNSMVSPSPSLINKANPRRYKDTDFACFLEYISSF 356 (370)
Q Consensus 288 Lq~~SnG~~kS~~HRVv~~~----~~~R~Si~~F~~P~~d~~i~P~~~lv~~~~p~~y~~~~~~ey~~~~~~~ 356 (370)
||+||||+|||++|||+.++ .++|||++||++|+.|++|+| ++|++||+..+++.
T Consensus 218 l~~~Tng~~kS~~HRVv~~~~~~~~~~R~Si~~F~~P~~d~~i~p--------------~ita~~~l~~rl~~ 276 (280)
T 3on7_A 218 LQEASDGYFPSTSHRVINPEGTDKTKSRISLPLFLHPHPSVVLSE--------------RYTADSYLMERLRE 276 (280)
T ss_dssp HHHHTTTSSCCCCEEEECCTTCCTTSCEEECCEEECCCTTCBCSS--------------SCBHHHHHHHHHHH
T ss_pred HHHHhCCcccCCCceEeCCCCCCCCCCeEEEEEEEcCCCCCEECC--------------CccHHHHHHHHHHH
Confidence 99999999999999998764 458999999999999999985 48999999987764
No 7
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155}
Probab=95.05 E-value=0.074 Score=48.27 Aligned_cols=79 Identities=22% Similarity=0.092 Sum_probs=54.9
Q ss_pred cceEeeecCCCCCCCCccccCCccccC-----------CeeEEee-CC----C-CCeeEEeCCeEEEecCCCCeEEEEeC
Q 035868 223 QQMVVNCYPPCPEPHLTLGMPPHSDYG-----------FLTLLLQ-DD----V-EGLQIQYKEKWVAVQPLASSFVVNVG 285 (370)
Q Consensus 223 ~~lr~~~YPp~~~~~~~~g~~~HtD~g-----------~lTlL~q-d~----v-~GLqV~~~g~W~~V~p~pgalvVNvG 285 (370)
.-+++++|.+- --..+|.|.. .+|+++. ++ . |.|.+.....=..|+|..|.+|+.-.
T Consensus 99 e~~~~~rY~~G------~~y~~H~D~~~~~~~~~~~~r~~T~~lYLndp~~~~GGetvf~~~~~~~~V~P~~G~~v~F~s 172 (243)
T 3dkq_A 99 YPPLFNRYQGG------ETFGYHIDNAIRSTPDGMIRTDLSATLFLSEPENYQGGELVIQDTYGQQSIKLSAGSLVLYPS 172 (243)
T ss_dssp EEEEEEEECTT------CEEEEECBCSEEEETTEEEECCEEEEEECSCGGGEEECCEEEEETTEEEEECCCTTCEEEEET
T ss_pred ccceEEEECCC------CeeccCCCCCCCCCCCccccceEEEEEEeCCCCCCCCceEEEeeCCCcEEEecCCCEEEEECC
Confidence 34788999863 2246677752 5777775 22 2 44666664445789999999999743
Q ss_pred cchhhhhCCccccccceeecCCCCCeEEEEEeec
Q 035868 286 DHLEIFSNGKYRSVLHRVLVNPAKSRISVASLHS 319 (370)
Q Consensus 286 D~Lq~~SnG~~kS~~HRVv~~~~~~R~Si~~F~~ 319 (370)
.++|+|.......|++++.+++
T Consensus 173 ------------~~lH~v~pV~~G~R~~~~~Wi~ 194 (243)
T 3dkq_A 173 ------------SSLHQVTPVLSGERTAAFMWLQ 194 (243)
T ss_dssp ------------TSEEEECCEEEECEEEEEEEEE
T ss_pred ------------CCeEcCccccccCEEEEEEehh
Confidence 3689996655568999999876
No 8
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=95.01 E-value=0.45 Score=42.15 Aligned_cols=43 Identities=23% Similarity=0.150 Sum_probs=34.5
Q ss_pred CeEEEecCCCCeEEEEeCcchhhhhCCccccccceeecCCC-CCeEEEEEeecCCC
Q 035868 268 EKWVAVQPLASSFVVNVGDHLEIFSNGKYRSVLHRVLVNPA-KSRISVASLHSLPF 322 (370)
Q Consensus 268 g~W~~V~p~pgalvVNvGD~Lq~~SnG~~kS~~HRVv~~~~-~~R~Si~~F~~P~~ 322 (370)
..+..|.|.+|.+||.-+.+ .|.|..+.. ++|+||+|.+.|..
T Consensus 166 ~~~~~i~P~~G~lvlFpS~l------------~H~V~p~~~~~~RiSIsFN~~~~~ 209 (216)
T 2rg4_A 166 RTFRSVAPKVGDVLLWESWL------------RHEVPMNMAEEDRISVSFNYAWGE 209 (216)
T ss_dssp CSEEEECCCTTEEEEEETTS------------CEEECCCCSSSCEEEEEEEEEC--
T ss_pred CCeeEecCCCCeEEEECCCC------------EEeccCCCCCCCEEEEEEEeecCC
Confidence 46779999999999997753 899987654 69999999998754
No 9
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A*
Probab=92.02 E-value=0.44 Score=43.16 Aligned_cols=79 Identities=20% Similarity=0.299 Sum_probs=55.9
Q ss_pred eEeeecCCCCCCCCccccCCccccC-----CeeEEee-CC------CCC-eeEEeCC--eEEEecCCCCeEEEEeCcchh
Q 035868 225 MVVNCYPPCPEPHLTLGMPPHSDYG-----FLTLLLQ-DD------VEG-LQIQYKE--KWVAVQPLASSFVVNVGDHLE 289 (370)
Q Consensus 225 lr~~~YPp~~~~~~~~g~~~HtD~g-----~lTlL~q-d~------v~G-LqV~~~g--~W~~V~p~pgalvVNvGD~Lq 289 (370)
+.+.+|++. .-...+|.|.. .+|+++. ++ -|| |.+..++ ....|.|..|.+|+.-.+.
T Consensus 119 ~~~~~Y~~~-----G~~y~~H~D~~~~~~R~~T~vlYLN~~w~~~~~GG~l~~~~~~~~~~~~v~P~~grlv~F~s~~-- 191 (247)
T 2hbt_A 119 AMVACYPGN-----GTGYVRHVDNPNGDGRCVTCIYYLNKDWDAKVSGGILRIFPEGKAQFADIEPKFDRLLFFWSDR-- 191 (247)
T ss_dssp EEEEEECSS-----SCCEEEECSSCSCCSEEEEEEEECBTTCCHHHHBCCEEECCTTCSSCEEECCBTTEEEEEECST--
T ss_pred EEEEEecCC-----CCcccccccCCCCCCceEEEEEEeCCCCCCCCCceeEEEecCCCCceEEEEcCCCEEEEEecCC--
Confidence 567889851 23456777763 6888885 21 144 6777644 6789999999999987542
Q ss_pred hhhCCccccccceeecCCCCCeEEEEEeec
Q 035868 290 IFSNGKYRSVLHRVLVNPAKSRISVASLHS 319 (370)
Q Consensus 290 ~~SnG~~kS~~HRVv~~~~~~R~Si~~F~~ 319 (370)
-.+|.|.. ..+.|+||+..+.
T Consensus 192 --------~~~H~V~p-~~~~R~sit~W~~ 212 (247)
T 2hbt_A 192 --------RNPHEVQP-AYATRYAITVWYF 212 (247)
T ss_dssp --------TCCEEECC-BSSCEEEEEEEEE
T ss_pred --------Cceeeecc-CCCEEEEEEEEEc
Confidence 15899965 4679999998764
No 10
>3i3q_A Alpha-ketoglutarate-dependent dioxygenase ALKB; beta jellyroll, DNA damage, DNA repair, iron, M binding, oxidoreductase; HET: AKG; 1.40A {Escherichia coli} SCOP: b.82.2.10 PDB: 2fd8_A* 2fdg_A* 2fdh_A* 2fdf_A* 2fdj_A 2fdk_A* 2fdi_A* 3i2o_A* 3i3m_A* 3i49_A* 3t4h_B* 3t3y_A* 3t4v_A* 3o1t_A* 3o1o_A* 3o1m_A* 3o1r_A* 3o1s_A* 3o1p_A* 3o1u_A* ...
Probab=87.94 E-value=3.9 Score=35.98 Aligned_cols=79 Identities=18% Similarity=0.204 Sum_probs=50.1
Q ss_pred ceEeeecCCCCCCCCccccCCcccc-----C--CeeEEeeCCCCCeeEEe---CCeEEEecCCCCeEEEEeCcchhhhhC
Q 035868 224 QMVVNCYPPCPEPHLTLGMPPHSDY-----G--FLTLLLQDDVEGLQIQY---KEKWVAVQPLASSFVVNVGDHLEIFSN 293 (370)
Q Consensus 224 ~lr~~~YPp~~~~~~~~g~~~HtD~-----g--~lTlL~qd~v~GLqV~~---~g~W~~V~p~pgalvVNvGD~Lq~~Sn 293 (370)
.+-+|+|.+- . ++++|.|- + ++||-+-.. .=+.+.. ++..+.+.-.+|.++|.-|+. +.|
T Consensus 106 ~~LvN~Y~~G-----~-~i~~H~D~~e~~~~~pI~svSLG~~-~~f~f~~~~~~~~~~~i~L~~GsllvM~G~~-r~~-- 175 (211)
T 3i3q_A 106 ACLINRYAPG-----A-KLSLHQDKDEPDLRAPIVSVSLGLP-AIFQFGGLKRNDPLKRLLLEHGDVVVWGGES-RLF-- 175 (211)
T ss_dssp EEEEEEECTT-----C-CEEEECCCCCSCTTSCEEEEEEESC-EEEEECCSSTTSCCEEEEECTTCEEEECGGG-TTC--
T ss_pred EEEEEEEcCC-----C-CcccccCCCccccCCCEEEEECCCC-eEEEEecccCCCceEEEECCCCCEEEECchH-Hce--
Confidence 4568999862 3 88999993 2 234433211 2234433 357889999999999998876 222
Q ss_pred CccccccceeecCCC-------CCeEEEEEee
Q 035868 294 GKYRSVLHRVLVNPA-------KSRISVASLH 318 (370)
Q Consensus 294 G~~kS~~HRVv~~~~-------~~R~Si~~F~ 318 (370)
.|.|..... ..|+|+.|-.
T Consensus 176 ------~H~I~~~~~~~~p~~~~~RIsLTFR~ 201 (211)
T 3i3q_A 176 ------YHGIQPLKAGFHPLTIDCRYNLTFRQ 201 (211)
T ss_dssp ------CEEECCCCCCCBTTTBTCEEEEEEEC
T ss_pred ------EeccCcccCCcCCCCCCCEEEEEeee
Confidence 477654322 3599998864
No 11
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A
Probab=87.18 E-value=1.9 Score=38.07 Aligned_cols=87 Identities=20% Similarity=0.268 Sum_probs=54.9
Q ss_pred ceEeeecCCCCCCCCccccCCcccc--------------CCeeEEee-CC--CCC-eeEEeCC-------------eEEE
Q 035868 224 QMVVNCYPPCPEPHLTLGMPPHSDY--------------GFLTLLLQ-DD--VEG-LQIQYKE-------------KWVA 272 (370)
Q Consensus 224 ~lr~~~YPp~~~~~~~~g~~~HtD~--------------g~lTlL~q-d~--v~G-LqV~~~g-------------~W~~ 272 (370)
-+++++|.+-. ...+|.|. ..+|+|+. ++ .|| +.+...+ .-+.
T Consensus 99 ~~qv~rY~~G~------~y~~H~D~~~~~~~~~~~~~~~R~~T~l~YLnd~~~GGeT~Fp~~~~~~~~~~~~~c~~~~~~ 172 (224)
T 2jig_A 99 GLQVLHYHDGQ------KYEPHYDYFHDPVNAGPEHGGQRVVTMLMYLTTVEEGGETVLPNAEQKVTGDGWSECAKRGLA 172 (224)
T ss_dssp CCEEEEEETTC------CEEEECCSSCCTTSSSCCCCSCEEEEEEEECSCCSEECCEEETTSSSCCCSTTSCTTGGGSEE
T ss_pred ceEEEecCCCc------cccCcccCCCCccccccccCCCeEEEEEEEecCCCCCCceeCCCcccccccccccccccCceE
Confidence 36778887522 24556664 24888875 32 344 4433211 2489
Q ss_pred ecCCCCeEEEEeCcchhhhhCCcc-ccccceeecCCCCCeEEEEEeecC
Q 035868 273 VQPLASSFVVNVGDHLEIFSNGKY-RSVLHRVLVNPAKSRISVASLHSL 320 (370)
Q Consensus 273 V~p~pgalvVNvGD~Lq~~SnG~~-kS~~HRVv~~~~~~R~Si~~F~~P 320 (370)
|+|..|.+||.-- ...||.. ..++|+|.......|+++..+++-
T Consensus 173 V~P~~G~al~f~~----~~~~g~~d~~~lH~~~PV~~G~K~~~~~Wi~~ 217 (224)
T 2jig_A 173 VKPIKGDALMFYS----LKPDGSNDPASLHGSCPTLKGDKWSATKWIHV 217 (224)
T ss_dssp ECCCTTCEEEEES----BCTTSCBCGGGCEEECCEEESEEEEEEEEEES
T ss_pred EecccCcEEEEEe----eCCCCCCCCCCcccCCccccceEEEEEEeEEc
Confidence 9999999888753 1233433 678999966555689999998864
No 12
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str}
Probab=86.33 E-value=2.5 Score=37.29 Aligned_cols=85 Identities=16% Similarity=0.085 Sum_probs=53.5
Q ss_pred ceEeeecCCCCCCCCccccCCccccC-----------CeeEEee-CC--CCCeeEEeCCeEEEecCCCCeEEEEeCcchh
Q 035868 224 QMVVNCYPPCPEPHLTLGMPPHSDYG-----------FLTLLLQ-DD--VEGLQIQYKEKWVAVQPLASSFVVNVGDHLE 289 (370)
Q Consensus 224 ~lr~~~YPp~~~~~~~~g~~~HtD~g-----------~lTlL~q-d~--v~GLqV~~~g~W~~V~p~pgalvVNvGD~Lq 289 (370)
-+++.+|.+... ..+|.|.. .+|+|+. ++ .||=-+..+ .=+.|+|..|.+|+.-.-
T Consensus 112 ~lqv~~Y~~G~~------y~~H~D~~~~~~~~~~~~R~~T~l~YLnd~~~GGeT~Fp~-~~~~V~P~~G~al~f~~~--- 181 (216)
T 3itq_A 112 GLHILNYEVDQQ------YKAHYDYFAEHSRSAANNRISTLVMYLNDVEEGGETFFPK-LNLSVHPRKGMAVYFEYF--- 181 (216)
T ss_dssp CCEEEEECBTCC------EEEECSSCCTTSGGGGGCEEEEEEEECSCCSEECCEEETT-TTEEECCCTTCEEEEECC---
T ss_pred ceeEEEeCCCCc------cccccCCCcCCCcccCCceEEEEEEecccCCcCceeEecC-CCCEEecCCCeEEEEecc---
Confidence 467888875322 45676653 4788876 33 244333322 127899999998887541
Q ss_pred hhhCCcc-ccccceeecCCCCCeEEEEEeec
Q 035868 290 IFSNGKY-RSVLHRVLVNPAKSRISVASLHS 319 (370)
Q Consensus 290 ~~SnG~~-kS~~HRVv~~~~~~R~Si~~F~~ 319 (370)
..||.. ..++|++.......|+++..+++
T Consensus 182 -~~~g~~d~~~lH~~~PV~~G~K~v~~~W~~ 211 (216)
T 3itq_A 182 -YQDQSLNELTLHGGAPVTKGEKWIATQWVR 211 (216)
T ss_dssp -CSSHHHHHTTCEEECCEEESCEEEEEEEEE
T ss_pred -CCCCCCCCccccccceeccccEEEEEeeEe
Confidence 122322 46799996655568999998875
No 13
>2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10
Probab=83.38 E-value=4.7 Score=36.01 Aligned_cols=83 Identities=11% Similarity=0.113 Sum_probs=52.1
Q ss_pred ceEeeecCCCCCCCCccccCCcccc--------CCeeEEeeCCCCCeeEEe-C----------CeEEEecCCCCeEEEEe
Q 035868 224 QMVVNCYPPCPEPHLTLGMPPHSDY--------GFLTLLLQDDVEGLQIQY-K----------EKWVAVQPLASSFVVNV 284 (370)
Q Consensus 224 ~lr~~~YPp~~~~~~~~g~~~HtD~--------g~lTlL~qd~v~GLqV~~-~----------g~W~~V~p~pgalvVNv 284 (370)
.+-+|+|++- .-++++|.|- .+.||-+-.. .=+.+.. . +..+.|.-.+|.++|.-
T Consensus 127 ~~LvN~Y~~G-----~d~i~~H~D~~~~~~~~~~IaslSLG~~-~~f~f~~~~~~~~~~~~~~~~~~~i~L~~gsllvM~ 200 (238)
T 2iuw_A 127 SLLCNLYRNE-----KDSVDWHSDDEPSLGRCPIIASLSFGAT-RTFEMRKKPPPEENGDYTYVERVKIPLDHGTLLIME 200 (238)
T ss_dssp EEEEEEECST-----TCCEEEECCCCGGGCSSCCEEEEEEESC-EEEEEEECCC--------CCCEEEEEECTTCEEEEE
T ss_pred EEEEEEECCC-----CCceeCCcCChhhcCCCCcEEEEECCCC-EEEEEeccCCccccCcccCCceEEEEcCCCCEEEEC
Confidence 4568999863 3478889984 2333333111 1233333 1 46899999999999999
Q ss_pred CcchhhhhCCccccccceeecCCCCCeEEEEEee
Q 035868 285 GDHLEIFSNGKYRSVLHRVLVNPAKSRISVASLH 318 (370)
Q Consensus 285 GD~Lq~~SnG~~kS~~HRVv~~~~~~R~Si~~F~ 318 (370)
|+.=..|.-|.-+.. .....|+|+.|=.
T Consensus 201 G~~r~~w~H~I~~~~------~~~~~RIsLTfR~ 228 (238)
T 2iuw_A 201 GATQADWQHRVPKEY------HSREPRVNLTFRT 228 (238)
T ss_dssp ETHHHHEEEEECCCS------SCCCCEEEEEEEC
T ss_pred hhhhCccEecCCCcC------CCCCCEEEEEeee
Confidence 997656654433211 1256899999865
No 14
>3s57_A Alpha-ketoglutarate-dependent dioxygenase ALKB HO; protein-DNA complex, jelly-roll fold, dioxygenase, dsDNA BIN plasma, oxidoreductase-DNA complex; HET: AKG; 1.60A {Homo sapiens} PDB: 3s5a_A* 3rzg_A 3rzl_A 3rzh_A* 3rzj_A* 3rzk_A* 3rzm_A 3bty_A* 3buc_A* 3h8r_A* 3h8o_A* 3h8x_A* 3btx_A* 3bu0_A* 3btz_A*
Probab=82.34 E-value=3.9 Score=35.64 Aligned_cols=80 Identities=11% Similarity=0.097 Sum_probs=50.2
Q ss_pred ceEeeecCCCCCCCCccccCCccccC--------CeeEEeeCCCCCeeEEe----------CCeEEEecCCCCeEEEEeC
Q 035868 224 QMVVNCYPPCPEPHLTLGMPPHSDYG--------FLTLLLQDDVEGLQIQY----------KEKWVAVQPLASSFVVNVG 285 (370)
Q Consensus 224 ~lr~~~YPp~~~~~~~~g~~~HtD~g--------~lTlL~qd~v~GLqV~~----------~g~W~~V~p~pgalvVNvG 285 (370)
.+-+|+|.+- .-++++|.|-. +.+|-+- ...=+.+.+ ++..+.+.-.+|.++|.-|
T Consensus 101 ~~LvN~Y~~G-----~d~i~~H~D~~~~~~~~~~IasvSLG-~~~~f~~~~~~~~~~~~~~~~~~~~~~L~~GsllvM~g 174 (204)
T 3s57_A 101 FVLINRYKDG-----SDHICEHRDDERELAPGSPIASVSFG-ASRDFVFRHKDSRGKSPSRRVAVVRLPLAHGSLLMMNH 174 (204)
T ss_dssp EEEEEEESST-----TCCEEEECCCCTTBCTTCCEEEEEEE-SCEEEEEEEGGGCSSSCSCCCCCEEEEECTTEEEEEET
T ss_pred eeEEEEECCC-----CCcccceecChhhccCCCcEEEEECC-CceEEEEEEcCCCccccccCCceEEEECCCCCEEEECc
Confidence 3458999863 23788898862 2233331 112244443 1257889999999999999
Q ss_pred cchhhhhCCccccccceeecCC--CCCeEEEEEe
Q 035868 286 DHLEIFSNGKYRSVLHRVLVNP--AKSRISVASL 317 (370)
Q Consensus 286 D~Lq~~SnG~~kS~~HRVv~~~--~~~R~Si~~F 317 (370)
++=..|. |.|-... ...|+|+.|=
T Consensus 175 ~~q~~w~--------H~Ip~~~~~~~~RislTFR 200 (204)
T 3s57_A 175 PTNTHWY--------HSLPVRKKVLAPRVNLTFR 200 (204)
T ss_dssp THHHHEE--------EEECCCTTCCSCEEEEEEE
T ss_pred hhhheeE--------eeccccCCCCCCEEEEEee
Confidence 8766564 5553322 3589999874
No 15
>3tht_A Alkylated DNA repair protein ALKB homolog 8; structural genomics, PSI-biology, northeast structural genom consortium, NESG; HET: AKG; 3.01A {Homo sapiens} PDB: 3thp_A*
Probab=74.37 E-value=5.2 Score=37.94 Aligned_cols=105 Identities=20% Similarity=0.225 Sum_probs=65.0
Q ss_pred cceEeeecCCCCCCCCccccCCccccC------CeeEEeeCCCCCeeEEe-CCeEEEecCCCCeEEEEeCcchhhhhCCc
Q 035868 223 QQMVVNCYPPCPEPHLTLGMPPHSDYG------FLTLLLQDDVEGLQIQY-KEKWVAVQPLASSFVVNVGDHLEIFSNGK 295 (370)
Q Consensus 223 ~~lr~~~YPp~~~~~~~~g~~~HtD~g------~lTlL~qd~v~GLqV~~-~g~W~~V~p~pgalvVNvGD~Lq~~SnG~ 295 (370)
..+-+|+|.+- -++++|.|-. +.||-+ ....=+.+.. +|.++.|.-.+|+++|.-|+.=..|.-|.
T Consensus 198 n~~lvN~Y~~G------~~I~~H~D~~~~~~~~I~slSL-G~~~~f~f~~~~~~~~~l~L~~gsLlvM~G~~r~~w~H~I 270 (345)
T 3tht_A 198 DQMTINQYEPG------QGIPAHIDTHSAFEDEIVSLSL-GSEIVMDFKHPDGIAVPVMLPRRSLLVMTGESRYLWTHGI 270 (345)
T ss_dssp SEEEEEEECTT------CCEEEECCCTTTBCSCEEEEEE-SSCEEEEEECTTSCEEEEEECTTEEEEECTHHHHTSEEEE
T ss_pred CEEEEEEecCC------CCEeeccCCchhcCCeEEEEEC-CCceeEEEccCCCceEEEEcCCCcEEEEChHHhhceEccC
Confidence 34668999862 2889999974 334433 1112244444 57799999999999999999888886665
Q ss_pred cccccceee------------------cCCCCCeEEEEEeecCCCCCeeeCCccccCC
Q 035868 296 YRSVLHRVL------------------VNPAKSRISVASLHSLPFNSMVSPSPSLINK 335 (370)
Q Consensus 296 ~kS~~HRVv------------------~~~~~~R~Si~~F~~P~~d~~i~P~~~lv~~ 335 (370)
-+-...-+- ..+...|+|+.|=.-+...+. ...|++.+.
T Consensus 271 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~r~~RiSlT~R~v~~~~c~-C~~~~~cd~ 327 (345)
T 3tht_A 271 TCRKFDTVQASESLKSGIITSDVGDLTLSKRGLRTSFTFRKVRQTPCN-CSYPLVCDS 327 (345)
T ss_dssp CCCSEEEEESGGGSSCEECCSSSSCEEEEECCCEEEEEEECBCSSCCC-CSCTTTCTT
T ss_pred CcccCCccCcccccccccccccCCCceeccCCCEEEEEEEecCCCCcC-CCCCCcccC
Confidence 443332221 112346999998876554221 124555553
No 16
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=49.30 E-value=99 Score=27.87 Aligned_cols=87 Identities=14% Similarity=0.216 Sum_probs=51.8
Q ss_pred HHHHHHcCeEEEEeCCCChHHHHHHHHHhhhhhCCCHHHHhhhccCCCCCCeecccccCCCCCcccccccccccccCCCC
Q 035868 80 TSACEKYGFFQVVNHGIPNNVISSMIDVSARFFELPIEVRSKYMSSDLTAPVRYGTSFNQNKDRVFCWRDFLKLVCHPSQ 159 (370)
Q Consensus 80 ~~A~~~~GfF~v~nHGv~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~~Gy~~~~~~~~~~~~dw~e~~~~~~~p~~ 159 (370)
..|+++-|.|-|+-.+||.++.+++- +++ ..| ..|.|.+- .-..+++-|.|.+-+......
T Consensus 167 A~a~~eAGA~~ivlE~vp~~~a~~it---~~l-~iP--------------~igIGag~-~~dgQvLV~~D~lG~~~~~~p 227 (264)
T 1m3u_A 167 ALALEAAGAQLLVLECVPVELAKRIT---EAL-AIP--------------VIGIGAGN-VTDGQILVMHDAFGITGGHIP 227 (264)
T ss_dssp HHHHHHHTCCEEEEESCCHHHHHHHH---HHC-SSC--------------EEEESSCT-TSSEEEECHHHHTTCSCSSCC
T ss_pred HHHHHHCCCcEEEEecCCHHHHHHHH---HhC-CCC--------------EEEeCCCC-CCCcceeeHHhhcCCCCCCCC
Confidence 36899999999999999986544322 221 222 24555442 234567888888766432111
Q ss_pred CccCCCCCCchhHHHHHHHHHHHHHH
Q 035868 160 DVLVHWPSYPTDMRRLAVTYAKEIKN 185 (370)
Q Consensus 160 ~~~~~WP~~~~~fr~~~~~y~~~~~~ 185 (370)
.....+-+.-...++.+.+|.++++.
T Consensus 228 kf~k~y~~~~~~~~~a~~~y~~~V~~ 253 (264)
T 1m3u_A 228 KFAKNFLAETGDIRAAVRQYMAEVES 253 (264)
T ss_dssp TTCCCSSTTTSSHHHHHHHHHHHHHH
T ss_pred CcchhhhhhHHHHHHHHHHHHHHHhc
Confidence 11122223334578888899888763
No 17
>1e5r_A Proline oxidase; oxidoreductase, oxygenase, 2-oxoglutarate dependent oxygenase; 2.30A {Streptomyces SP} SCOP: b.82.2.4 PDB: 1e5s_A
Probab=43.59 E-value=24 Score=32.48 Aligned_cols=65 Identities=14% Similarity=0.247 Sum_probs=41.5
Q ss_pred cccCCcccc--------CCeeEEee-CCCCCeeEEeCCeEEEecCCCCeEEEEeCcchhhhhCCccccccceeecCCCCC
Q 035868 240 LGMPPHSDY--------GFLTLLLQ-DDVEGLQIQYKEKWVAVQPLASSFVVNVGDHLEIFSNGKYRSVLHRVLVNPAKS 310 (370)
Q Consensus 240 ~g~~~HtD~--------g~lTlL~q-d~v~GLqV~~~g~W~~V~p~pgalvVNvGD~Lq~~SnG~~kS~~HRVv~~~~~~ 310 (370)
-.+.+|.|+ +.+-+.+. ...+|..+..+|+-+..++ ..+.++|. +..|+|.++++.+
T Consensus 102 ~~I~~HrD~~~l~~~~~~~~RlHIPL~Tnp~~~f~vdg~~~~m~~-GE~w~~d~-------------~~~H~v~N~g~~~ 167 (290)
T 1e5r_A 102 AIVIPHRDFVELDREVDRYFRTFMVLEDSPLAFHSNEDTVIHMRP-GEIWFLDA-------------ATVHSAVNFSEIS 167 (290)
T ss_dssp EEEEEECCC--------CBCCEEEECSCCTTEEEEETTEEECCCT-TEEEECCT-------------TSCEEEEESSSSC
T ss_pred CEeeCccCccccccccCCceEEEeeEecCCCcEEEECCEEEecCC-CCEEEEcC-------------CCeeEEEcCCCCC
Confidence 357889998 33444443 2346777776775554444 22233332 3489999999999
Q ss_pred eEEEEEee
Q 035868 311 RISVASLH 318 (370)
Q Consensus 311 R~Si~~F~ 318 (370)
|+.+.+=+
T Consensus 168 RIhLv~D~ 175 (290)
T 1e5r_A 168 RQSLCVDF 175 (290)
T ss_dssp CCEEEEEE
T ss_pred eEEEEEEe
Confidence 99998766
No 18
>2dbn_A Hypothetical protein YBIU; alpha/beta structure, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Escherichia coli} PDB: 2dbi_A 2csg_A*
Probab=42.60 E-value=8.3 Score=37.79 Aligned_cols=53 Identities=11% Similarity=0.278 Sum_probs=38.7
Q ss_pred CCCceeeCCCCCCCChHHHHHHHHHHHHHcCeEEEEeCCCChHHHHHHHHHhhhhhC
Q 035868 57 LKLPVIDFSELQGPNRSEVLKSLTSACEKYGFFQVVNHGIPNNVISSMIDVSARFFE 113 (370)
Q Consensus 57 ~~iPvIDls~l~~~~~~~~~~~l~~A~~~~GfF~v~nHGv~~~l~~~~~~~~~~FF~ 113 (370)
.-||.||++.+.+ ..+.++..+..++.|++.|.|. ||.+...+..+...+|.+
T Consensus 99 ~~iP~i~f~di~~---~~~s~~~~~~ir~rG~vVIRgv-vp~e~A~~~~~~~~~yl~ 151 (461)
T 2dbn_A 99 AVWPVLSYADIKA---GHVTAEQREQIKRRGCAVIKGH-FPREQALGWDQSMLDYLD 151 (461)
T ss_dssp CSSCEEEHHHHHH---TCCCHHHHHHHHHHSEEEEETS-SCHHHHHHHHHHHHHHHH
T ss_pred CCcceecHHHhcC---CCCCHHHHHHHHhccEEEECCC-CCHHHHHHHHHHHHHHHH
Confidence 5699999987631 1123455677899999988776 899888877777777753
No 19
>2opi_A L-fuculose-1-phosphate aldolase; L-fuculose-1-phosphate aldolas structural genomics, PSI-2, protein structure initiative; 2.50A {Bacteroides thetaiotaomicron}
Probab=41.21 E-value=9.5 Score=33.18 Aligned_cols=36 Identities=28% Similarity=0.397 Sum_probs=29.3
Q ss_pred CCceeeCCCCCCCChHHHHHHHHHHHHHcCeEEEEeCCC
Q 035868 58 KLPVIDFSELQGPNRSEVLKSLTSACEKYGFFQVVNHGI 96 (370)
Q Consensus 58 ~iPvIDls~l~~~~~~~~~~~l~~A~~~~GfF~v~nHGv 96 (370)
.||++++... +..++++.+.+++.+.-.+.+.|||+
T Consensus 125 ~v~~~~y~~~---g~~~la~~i~~~l~~~~avll~nHG~ 160 (212)
T 2opi_A 125 EIPVIPYYRP---GSPELAKAVVEAMLKHNSVLLTNHGQ 160 (212)
T ss_dssp CCCEECCCCT---TCHHHHHHHHHHTSSCSEEEETTTEE
T ss_pred CeEEEcCCCC---CcHHHHHHHHHHhccCCEEEEcCCCc
Confidence 6999998743 45678889999998888888899996
No 20
>3rcq_A Aspartyl/asparaginyl beta-hydroxylase; structural genomics, structural genomics consortium, SGC, oxidoreductase, human; HET: OGA; 2.05A {Homo sapiens}
Probab=38.34 E-value=35 Score=29.42 Aligned_cols=67 Identities=19% Similarity=0.258 Sum_probs=44.8
Q ss_pred cccCCccccC--CeeEEeeCCCCCeeEEeCCeEEEecCCCCeEEEEeCcchhhhhCCcc----ccccceeecCCCCCeEE
Q 035868 240 LGMPPHSDYG--FLTLLLQDDVEGLQIQYKEKWVAVQPLASSFVVNVGDHLEIFSNGKY----RSVLHRVLVNPAKSRIS 313 (370)
Q Consensus 240 ~g~~~HtD~g--~lTlL~qd~v~GLqV~~~g~W~~V~p~pgalvVNvGD~Lq~~SnG~~----kS~~HRVv~~~~~~R~S 313 (370)
..+.+|+|+. .|++.+ ||+|- + .+ ..+.||+.-..|..|.. -|-+|.|...+++.|+-
T Consensus 113 ~~I~pH~g~~n~~lR~HL-----~L~~p---------~-~~-~~i~V~~~~~~w~eGe~~~fDds~~Hev~N~~d~~Rvv 176 (197)
T 3rcq_A 113 THVWPHTGPTNCRLRMHL-----GLVIP---------K-EG-CKIRCANETKTWEEGKVLIFDDSFEHEVWQDASSFRLI 176 (197)
T ss_dssp EEEEEECCSCTTEEEEEE-----EEECC---------S-SS-EEEEETTEEECCCBTCEEEECTTSCEEEEECSSSCEEE
T ss_pred CCcCCeeCCCCCeEEEEE-----EEEeC---------C-CC-cEEEECCEEEEeeCCcEEEEcCCeEEEEEECCCCCEEE
Confidence 4578888874 566655 44431 1 12 33557777777777775 36799999998889988
Q ss_pred EEE-eecCCC
Q 035868 314 VAS-LHSLPF 322 (370)
Q Consensus 314 i~~-F~~P~~ 322 (370)
+.+ |.+|+.
T Consensus 177 L~~D~~rPdl 186 (197)
T 3rcq_A 177 FIVDVWHPEL 186 (197)
T ss_dssp EEEEEECTTS
T ss_pred EEEeeeCCCC
Confidence 766 456654
No 21
>2fk5_A Fuculose-1-phosphate aldolase; class II aldolase, metal binding, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 1.90A {Thermus thermophilus} PDB: 2flf_A
Probab=36.86 E-value=16 Score=31.42 Aligned_cols=36 Identities=19% Similarity=0.204 Sum_probs=29.1
Q ss_pred CCcee-eCCCCCCCChHHHHHHHHHHHHHcCeEEEEeCCC
Q 035868 58 KLPVI-DFSELQGPNRSEVLKSLTSACEKYGFFQVVNHGI 96 (370)
Q Consensus 58 ~iPvI-Dls~l~~~~~~~~~~~l~~A~~~~GfF~v~nHGv 96 (370)
.||++ ++... +..++++.+.+++.+.-.+.+.|||+
T Consensus 117 ~ip~~~~y~~~---g~~ela~~i~~~l~~~~avll~nHG~ 153 (200)
T 2fk5_A 117 EVPVLAPKTVS---ATEEAALSVAEALREHRACLLRGHGA 153 (200)
T ss_dssp CEEEECCSCCS---SSHHHHHHHHHHHHHCSEEEETTTEE
T ss_pred CceEecCCCCC---CcHHHHHHHHHHhCcCCEEEECCCCc
Confidence 58999 77643 45678889999999888888999995
No 22
>2irp_A Putative aldolase class 2 protein AQ_1979; aldehyde, enzymatic mechanism; 2.40A {Aquifex aeolicus}
Probab=34.88 E-value=19 Score=31.03 Aligned_cols=35 Identities=20% Similarity=0.308 Sum_probs=27.8
Q ss_pred CCceeeCCCCCCCChHHHHHHHHHHHHHcC---eEEEEeCCC
Q 035868 58 KLPVIDFSELQGPNRSEVLKSLTSACEKYG---FFQVVNHGI 96 (370)
Q Consensus 58 ~iPvIDls~l~~~~~~~~~~~l~~A~~~~G---fF~v~nHGv 96 (370)
.||+++.. ++..++++.+.+++.+.+ .+.+.|||+
T Consensus 139 ~vp~~~~~----~g~~~La~~i~~~l~~~~~~~avll~nHG~ 176 (208)
T 2irp_A 139 KIPIFPNE----QNIPLLAKEVENYFKTSEDKYGFLIRGHGL 176 (208)
T ss_dssp EEEEECCC----SCHHHHHHHHHHHHHHCSCCSCEEETTTEE
T ss_pred ceeeecCC----CCHHHHHHHHHHHHhcCCCceEEEEcCCCC
Confidence 58888764 266788889999998875 788889996
No 23
>4ay7_A Methylcobalamin\: coenzyme M methyltransferase; TIM barrel; 1.80A {Methanosarcina mazei} PDB: 4ay8_A
Probab=34.25 E-value=57 Score=30.28 Aligned_cols=43 Identities=12% Similarity=0.124 Sum_probs=34.2
Q ss_pred ChHHHHHHHHHHHHHcCeEEEEeCCCCh----HHHHHHHHHhhhhhC
Q 035868 71 NRSEVLKSLTSACEKYGFFQVVNHGIPN----NVISSMIDVSARFFE 113 (370)
Q Consensus 71 ~~~~~~~~l~~A~~~~GfF~v~nHGv~~----~l~~~~~~~~~~FF~ 113 (370)
..+++.+++.+.++.-||..=.+|||+. +-+..+.+++++|++
T Consensus 302 ~~e~i~~~v~~~l~~~g~I~~~Ghgi~p~tp~env~a~v~av~ey~A 348 (348)
T 4ay7_A 302 PVDKIKAEAKEALEGGIDVLAPGCGIAPMTPLENVKALVAARDEFYA 348 (348)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEESSSCCTTCCHHHHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHHhCCCCEEeCCCccCCCCCHHHHHHHHHHHHHhcC
Confidence 4566667778888888887767899754 779999999999975
No 24
>1e4c_P L-fuculose 1-phosphate aldolase; aldolase (class II), bacterial L-fucose metabolism; 1.66A {Escherichia coli} SCOP: c.74.1.1 PDB: 1fua_A 2fua_A 3fua_A 4fua_A* 1dzv_P 1e4b_P 1e47_P* 1e48_P* 1dzz_P 1e46_P 1dzu_P 1dzy_P 1dzx_P 1dzw_P 1e49_P 1e4a_P
Probab=34.08 E-value=14 Score=32.15 Aligned_cols=36 Identities=14% Similarity=0.302 Sum_probs=28.8
Q ss_pred CCceeeCCCCCCCChHHHHHHHHHHHHHcCeEEEEeCCC
Q 035868 58 KLPVIDFSELQGPNRSEVLKSLTSACEKYGFFQVVNHGI 96 (370)
Q Consensus 58 ~iPvIDls~l~~~~~~~~~~~l~~A~~~~GfF~v~nHGv 96 (370)
.||++++... +..++++.+.+++.+.-.+.+.|||+
T Consensus 122 ~ip~~~y~~~---g~~~la~~i~~~l~~~~avll~nHG~ 157 (215)
T 1e4c_P 122 SIPCAPYATF---GTRELSEHVALALKNRKATLLQHHGL 157 (215)
T ss_dssp CBCEECCCCT---TCHHHHHHHHHHTSSCSEEEETTTEE
T ss_pred CcceeeCCCC---CcHHHHHHHHHHhccCCEEEEcCCCc
Confidence 5899988643 44577888999998888888889996
No 25
>3o2g_A Gamma-butyrobetaine dioxygenase; gamma-butyrobetaine hydroxylase, 2-OXOG dioxygenase 1, oxidoreductase, structural genomics; HET: OGA NM2; 1.78A {Homo sapiens} PDB: 3ms5_A* 3n6w_A
Probab=33.60 E-value=23 Score=33.76 Aligned_cols=52 Identities=19% Similarity=0.260 Sum_probs=39.2
Q ss_pred CCceeeCCCCCCCChHHHHHHHHHHHHHcCeEEEEeCCCChHHHHHHHHHhhhhhCC
Q 035868 58 KLPVIDFSELQGPNRSEVLKSLTSACEKYGFFQVVNHGIPNNVISSMIDVSARFFEL 114 (370)
Q Consensus 58 ~iPvIDls~l~~~~~~~~~~~l~~A~~~~GfF~v~nHGv~~~l~~~~~~~~~~FF~l 114 (370)
++|.||++.+. ..++.+.++.+|+.++|+..+.|-.++.+ ...+.++.|=.+
T Consensus 122 ~~~~~~~~~~l--~~d~~~~~~~~~l~~~Gvv~frg~~~~~~---~~~~~a~~~G~l 173 (388)
T 3o2g_A 122 QLPTLDFEDVL--RYDEHAYKWLSTLKKVGIVRLTGASDKPG---EVSKLGKRMGFL 173 (388)
T ss_dssp CCCEEEHHHHH--HCHHHHHHHHHHHHHHSEEEEECCCSSTT---HHHHHHHHHSCC
T ss_pred CCCccCHHHHh--cCHHHHHHHHHHHHhcCEEEEeCCCCCHH---HHHHHHHHhCCC
Confidence 68999998653 23578899999999999999998877754 455566666444
No 26
>3kt7_A PKHD-type hydroxylase TPA1; double-stranded beta helix fold, dioxygenase, iron, mRNP complex, prolyl hydroxylase; HET: AKG; 1.77A {Saccharomyces cerevisiae} PDB: 3kt1_A 3kt4_A 3mgu_A
Probab=32.10 E-value=92 Score=31.70 Aligned_cols=83 Identities=19% Similarity=0.206 Sum_probs=52.3
Q ss_pred eEeeecCCCCCCCCccccCCcccc-C--CeeEEee----C------CCCCeeEEeC--------CeEEEecCCCCeEEEE
Q 035868 225 MVVNCYPPCPEPHLTLGMPPHSDY-G--FLTLLLQ----D------DVEGLQIQYK--------EKWVAVQPLASSFVVN 283 (370)
Q Consensus 225 lr~~~YPp~~~~~~~~g~~~HtD~-g--~lTlL~q----d------~v~GLqV~~~--------g~W~~V~p~pgalvVN 283 (370)
+.++.|++ .-.+..|.|. + .||+++. | .-|-|+++.. .....|.|..|.+||.
T Consensus 126 ~~~a~Y~~------G~fL~~H~D~~~~RrvS~VLYLN~pd~~W~~e~GGeL~Lyd~d~~~~P~~d~~~~I~P~fNrLV~F 199 (633)
T 3kt7_A 126 MSINTYTK------GCHLLTHDDVIGSRRISFILYLPDPDRKWKSHYGGGLRLFPSILPNVPHSDPSAKLVPQFNQIAFF 199 (633)
T ss_dssp EEEEEECT------TCEEEEECCCCTTEEEEEEEECSCTTSCCCGGGBCCEEECCEEETTEECSSCSEEECCCTTEEEEE
T ss_pred EEEEEeCC------CCeeeecCCCCCCeEEEEEEEcCCCCCCCCccCCceEEEecCCCcCCCCCCceEEEecCCCeEEEE
Confidence 66788875 3346778884 2 3677763 2 1344888762 2477899999999997
Q ss_pred eCcchhhhhCCccccccceeec-CCCCCeEEEEEee-cCCC
Q 035868 284 VGDHLEIFSNGKYRSVLHRVLV-NPAKSRISVASLH-SLPF 322 (370)
Q Consensus 284 vGD~Lq~~SnG~~kS~~HRVv~-~~~~~R~Si~~F~-~P~~ 322 (370)
.-.- + ...|.|.. .+++.|+||+-.+ .|..
T Consensus 200 ~vsp------~---~S~H~V~eV~~~~~RlSItGWF~~p~~ 231 (633)
T 3kt7_A 200 KVLP------G---FSFHDXEEVKVDKHRLSIQGWYHIPQV 231 (633)
T ss_dssp ECCT------T---TCCEEECCBCSSCCEEEEEEEEECCCT
T ss_pred EcCC------C---CCcCCCCccCCCCCEEEEEEEeccCCC
Confidence 5310 1 24676622 1278999998665 4543
No 27
>1pvt_A Sugar-phosphate aldolase; structural genomics, PSI, protein initiative, midwest center for structural genomics, MCSG; 2.50A {Thermotoga maritima} SCOP: c.74.1.1
Probab=31.55 E-value=19 Score=31.89 Aligned_cols=37 Identities=16% Similarity=0.185 Sum_probs=29.4
Q ss_pred CCCceeeCCCCCCCChHHHHHHHHHHHHHcCeEEEEeCCC
Q 035868 57 LKLPVIDFSELQGPNRSEVLKSLTSACEKYGFFQVVNHGI 96 (370)
Q Consensus 57 ~~iPvIDls~l~~~~~~~~~~~l~~A~~~~GfF~v~nHGv 96 (370)
..||++++... +..++++.+.+++++.-.+.+.|||+
T Consensus 160 ~~v~~~~y~~~---g~~ela~~i~~~l~~~~avll~nHG~ 196 (238)
T 1pvt_A 160 QGISVVEFEKP---GSVELGLKTVEKSEGKDAVLWDKHGV 196 (238)
T ss_dssp SCCEEECCCST---TCHHHHHHHHHHTSSCSEEEETTSCE
T ss_pred CCceEecCCCC---CcHHHHHHHHHHhccCCEEEEcCCCc
Confidence 35899988643 45678888999998888888889996
No 28
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=30.73 E-value=1.8e+02 Score=26.24 Aligned_cols=86 Identities=13% Similarity=0.211 Sum_probs=51.1
Q ss_pred HHHHHHcCeEEEEeCCCChHHHHHHHHHhhhhhCCCHHHHhhhccCCCCCCeecccccCCCCCcccccccccccccCCCC
Q 035868 80 TSACEKYGFFQVVNHGIPNNVISSMIDVSARFFELPIEVRSKYMSSDLTAPVRYGTSFNQNKDRVFCWRDFLKLVCHPSQ 159 (370)
Q Consensus 80 ~~A~~~~GfF~v~nHGv~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~~Gy~~~~~~~~~~~~dw~e~~~~~~~p~~ 159 (370)
..|+++-|.|-|+-.+||.++.+++ ++++ ..| ..|.|.+- .-..+++-|.|.+-+......
T Consensus 167 A~a~~eAGA~~ivlE~vp~~~a~~i---t~~l-~iP--------------~igIGaG~-~~dgQvLV~~D~lG~~~~~~p 227 (275)
T 1o66_A 167 AKAHDDAGAAVVLMECVLAELAKKV---TETV-SCP--------------TIGIGAGA-DCDGQVLVMHDMLGIFPGKTA 227 (275)
T ss_dssp HHHHHHTTCSEEEEESCCHHHHHHH---HHHC-SSC--------------EEEESSCS-CSSEEEECHHHHTTCSSSSCC
T ss_pred HHHHHHcCCcEEEEecCCHHHHHHH---HHhC-CCC--------------EEEECCCC-CCCcceeeHHhhcCCCCCCCC
Confidence 4689999999999999997654432 2221 222 24555442 234567888888766432111
Q ss_pred CccCCCCCCchhHHHHHHHHHHHHH
Q 035868 160 DVLVHWPSYPTDMRRLAVTYAKEIK 184 (370)
Q Consensus 160 ~~~~~WP~~~~~fr~~~~~y~~~~~ 184 (370)
.....+-+.-...++.+.+|.++++
T Consensus 228 kf~k~y~~~~~~~~~a~~~y~~~V~ 252 (275)
T 1o66_A 228 KFVKNFMQGHDSVQAAVRAYVAEVK 252 (275)
T ss_dssp TTCCCSSTTCSSHHHHHHHHHHHHH
T ss_pred CchhhhhhHHHHHHHHHHHHHHHHh
Confidence 1112222333457788888888776
No 29
>1m5a_B Insulin B chain; alpha helices, beta sheets, 3(10) helices, disulphide bridge hormone-growth factor complex; 1.20A {Sus scrofa} SCOP: g.1.1.1 PDB: 1aph_B 1b18_B 1b19_B 1b2a_B 1b2b_B 1b2c_B 1b2d_B 1b2e_B 1b2f_B 1b2g_B 1bph_B 1cph_B 1dph_B 1b17_B 1mpj_B 1wav_B 1zni_B 2a3g_B 2bn1_B 2bn3_B ...
Probab=30.70 E-value=49 Score=19.49 Aligned_cols=18 Identities=33% Similarity=0.696 Sum_probs=16.2
Q ss_pred HHHHHHHHHHHHHcCeEE
Q 035868 73 SEVLKSLTSACEKYGFFQ 90 (370)
Q Consensus 73 ~~~~~~l~~A~~~~GfF~ 90 (370)
..+++.|.-.|.+-|||+
T Consensus 9 s~LVdaL~~vCgdRGF~~ 26 (30)
T 1m5a_B 9 SHLVEALYLVCGERGFFY 26 (30)
T ss_dssp HHHHHHHHHHHGGGCEEE
T ss_pred HHHHHHHHHHhccCcccc
Confidence 578899999999999997
No 30
>2v9l_A Rhamnulose-1-phosphate aldolase; entropy index, metal-binding, oligomerization, zinc, lyase, class II, cytoplasm; HET: PGO; 1.23A {Escherichia coli} PDB: 2uyv_A* 1ojr_A 2v9g_A* 1gt7_A* 2v9n_A* 2uyu_A* 2v9m_A* 2v9o_A 2v9e_A 2v9f_A 2v9i_A 2v29_A 2v2a_A* 2v2b_A
Probab=28.26 E-value=20 Score=32.46 Aligned_cols=36 Identities=8% Similarity=0.138 Sum_probs=29.4
Q ss_pred CCceeeCCCCCCCChHHHHHHHHHHHHHcCeEEEEeCCC
Q 035868 58 KLPVIDFSELQGPNRSEVLKSLTSACEKYGFFQVVNHGI 96 (370)
Q Consensus 58 ~iPvIDls~l~~~~~~~~~~~l~~A~~~~GfF~v~nHGv 96 (370)
.||++++... +..++++.+.+++++.-.+.+.|||+
T Consensus 179 ~v~v~~y~~~---g~~ela~~i~~~l~~~~avll~nHG~ 214 (274)
T 2v9l_A 179 GVGILPWMVP---GTDAIGQATAQEMQKHSLVLWPFHGV 214 (274)
T ss_dssp CEEECCCCCS---SSHHHHHHHHHHHTTCSEEEETTTEE
T ss_pred ceeEecCCCC---CCHHHHHHHHHHHccCCEEEEcCCCc
Confidence 5888887642 55688889999999888888999996
No 31
>2vf9_A Coat protein; virion, RNA-binding, capsid protein, structural protein, virus; 3.50A {Bacteriophage PRR1}
Probab=26.42 E-value=16 Score=27.47 Aligned_cols=18 Identities=44% Similarity=0.628 Sum_probs=14.7
Q ss_pred hhhhhCCccccccceeec
Q 035868 288 LEIFSNGKYRSVLHRVLV 305 (370)
Q Consensus 288 Lq~~SnG~~kS~~HRVv~ 305 (370)
|..-|||+|||++.-|+.
T Consensus 49 lrktsngrykstlklvvp 66 (131)
T 2vf9_A 49 LRKTSNGRYKSTLKLVVP 66 (131)
T ss_dssp EEECTTSEEEEEEEEEEE
T ss_pred EEecCCCceeeeEEEEEE
Confidence 456799999999988754
No 32
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=25.47 E-value=2.2e+02 Score=25.86 Aligned_cols=86 Identities=21% Similarity=0.436 Sum_probs=48.5
Q ss_pred HHHHHHcCeEEEEeCCCChHHHHHHHHHhhhhhCCCHHHHhhhccCCCCCCeecccccCCCCCcccccccccccccCCCC
Q 035868 80 TSACEKYGFFQVVNHGIPNNVISSMIDVSARFFELPIEVRSKYMSSDLTAPVRYGTSFNQNKDRVFCWRDFLKLVCHPSQ 159 (370)
Q Consensus 80 ~~A~~~~GfF~v~nHGv~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~~Gy~~~~~~~~~~~~dw~e~~~~~~~p~~ 159 (370)
..|+++-|.|-|+-.+||.++.+++- +++ ..| ..|.|.+- .-..+++-|.|.+-+......
T Consensus 185 A~a~~eAGA~~ivlE~vp~~~a~~it---~~l-~iP--------------~igIGaG~-~~dgQvLV~~D~lG~~~~~~p 245 (281)
T 1oy0_A 185 AIAVAEAGAFAVVMEMVPAELATQIT---GKL-TIP--------------TVGIGAGP-NCDGQVLVWQDMAGFSGAKTA 245 (281)
T ss_dssp HHHHHHHTCSEEEEESCCHHHHHHHH---HHC-SSC--------------EEEESSCS-CSSEEEECHHHHTTCSCSCCC
T ss_pred HHHHHHcCCcEEEEecCCHHHHHHHH---HhC-CCC--------------EEEeCCCC-CCCcceeeHhhhcCCCCCCCC
Confidence 36899999999999999976544322 221 222 24555442 234567888888766422111
Q ss_pred CccCCCCCCchhHHHHHHHHHHHHH
Q 035868 160 DVLVHWPSYPTDMRRLAVTYAKEIK 184 (370)
Q Consensus 160 ~~~~~WP~~~~~fr~~~~~y~~~~~ 184 (370)
.....+-+.-...++.+.+|.++++
T Consensus 246 kf~k~y~~~~~~~~~a~~~y~~~V~ 270 (281)
T 1oy0_A 246 RFVKRYADVGGELRRAAMQYAQEVA 270 (281)
T ss_dssp TTCCCCCCHHHHHHHHHHHHHHHHH
T ss_pred CchhhhhhhHHHHHHHHHHHHHHHh
Confidence 1111222223445667777776664
No 33
>2ww6_A Fibritin, T4 fibritin; D-amino acids, chaperone, viral protein; HET: DPN PG4; 0.98A {Enterobacteria phage T4} PDB: 1rfo_A 1u0p_A 2kbl_A 2ww7_A*
Probab=24.39 E-value=59 Score=18.49 Aligned_cols=14 Identities=14% Similarity=0.337 Sum_probs=10.8
Q ss_pred CeeEEeCCeEEEec
Q 035868 261 GLQIQYKEKWVAVQ 274 (370)
Q Consensus 261 GLqV~~~g~W~~V~ 274 (370)
=..|+++|.|+...
T Consensus 11 ~~Yvr~dg~WV~l~ 24 (27)
T 2ww6_A 11 QAYVRKFGEWVLLS 24 (27)
T ss_dssp CEEEEETTEEEEGG
T ss_pred ceeEEEcCeEEEcc
Confidence 35788899999764
No 34
>3ocr_A Class II aldolase/adducin domain protein; PSI-2, midwest center for structural genomics, protein struc initiative, MCSG, lyase; 1.95A {Pseudomonas syringae PV}
Probab=23.37 E-value=31 Score=31.32 Aligned_cols=37 Identities=11% Similarity=0.187 Sum_probs=29.5
Q ss_pred CCceeeCCCCCCCChHHHHHHHHHHHHHcCeEEEEeCCC
Q 035868 58 KLPVIDFSELQGPNRSEVLKSLTSACEKYGFFQVVNHGI 96 (370)
Q Consensus 58 ~iPvIDls~l~~~~~~~~~~~l~~A~~~~GfF~v~nHGv 96 (370)
.||++|+.... ...++.+.|.+++.+.-.+.|.|||+
T Consensus 156 ~v~~~~y~~~~--~~~el~~~i~~~l~~~~avlL~nHG~ 192 (273)
T 3ocr_A 156 RVAYHGYEGIA--LDLSERERLVADLGDKSVMILRNHGL 192 (273)
T ss_dssp TEEEECCCCSS--CCHHHHHHHHHHHTTCSEEEETTTEE
T ss_pred CEEEECCCCCC--CCHHHHHHHHHHhCcCCEEEEcCCce
Confidence 58888887542 24677888999999988999999995
No 35
>1otj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, alpha ketoglutarate-dependent dioxygenase, oxidoreductase; 1.90A {Escherichia coli} SCOP: b.82.2.5 PDB: 1gqw_A* 1os7_A* 1gy9_A
Probab=21.35 E-value=93 Score=27.69 Aligned_cols=50 Identities=12% Similarity=0.133 Sum_probs=36.2
Q ss_pred CCCceeeCCCCCCCChHHHHHHHHHHHHHcCeEEEEeCCCChHHHHHHHHHhhhhh
Q 035868 57 LKLPVIDFSELQGPNRSEVLKSLTSACEKYGFFQVVNHGIPNNVISSMIDVSARFF 112 (370)
Q Consensus 57 ~~iPvIDls~l~~~~~~~~~~~l~~A~~~~GfF~v~nHGv~~~l~~~~~~~~~~FF 112 (370)
++|+-||++...+ ++..++|.+++.++|+..+.+-.++.+ +..+.++.|=
T Consensus 16 aei~gvdl~~~l~---~~~~~~l~~~l~~~Gvv~frg~~~~~~---~~~~~~~~~G 65 (283)
T 1otj_A 16 AQISGADLTRPLS---DNQFEQLYHAVLRHQVVFLRDQAITPQ---QQRALAQRFG 65 (283)
T ss_dssp EEEESCCSSSCCC---HHHHHHHHHHHHHHSEEEECSCCCCHH---HHHHHHHTTS
T ss_pred EEEECCCcCccCC---HHHHHHHHHHHHHCCEEEECCCCCCHH---HHHHHHHHhC
Confidence 4577789987432 356889999999999999988776554 4455566653
No 36
>1oih_A Putative alkylsulfatase ATSK; non-heme Fe(II) alphaketoglutarate dependent dioxygenase, jelly roll, oxidoreductase; 1.89A {Pseudomonas putida} SCOP: b.82.2.5 PDB: 1oii_A* 1oij_B* 1vz4_A 1vz5_A 1oik_A* 1oij_A* 1oij_C*
Probab=21.23 E-value=82 Score=28.43 Aligned_cols=52 Identities=8% Similarity=0.033 Sum_probs=37.4
Q ss_pred CCCceeeCCCCCCCChHHHHHHHHHHHHHcCeEEEEeCC-CChHHHHHHHHHhhhhhCC
Q 035868 57 LKLPVIDFSELQGPNRSEVLKSLTSACEKYGFFQVVNHG-IPNNVISSMIDVSARFFEL 114 (370)
Q Consensus 57 ~~iPvIDls~l~~~~~~~~~~~l~~A~~~~GfF~v~nHG-v~~~l~~~~~~~~~~FF~l 114 (370)
++|+-||++...+ ++..++|.+++.++|+..+.+-. ++. ++..+.++.|=.+
T Consensus 26 aei~gvdl~~~l~---~~~~~~l~~~l~~~Gvv~fRg~~~l~~---~~~~~~~~~fG~l 78 (301)
T 1oih_A 26 AEIRGVKLSPDLD---AATVEAIQAALVRHKVIFFRGQTHLDD---QSQEGFAKLLGEP 78 (301)
T ss_dssp EEEESCCCCTTCC---HHHHHHHHHHHHHHSEEEECCCTTCCH---HHHHHHHHTTSCB
T ss_pred eEEeCCCccccCC---HHHHHHHHHHHHHCCEEEECCCCCCCH---HHHHHHHHHhCCC
Confidence 4577788887322 35688999999999999888766 664 4566667766443
Done!