Query 035869
Match_columns 429
No_of_seqs 132 out of 1221
Neff 8.7
Searched_HMMs 29240
Date Mon Mar 25 11:52:25 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/035869.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/035869hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2bgh_A Vinorine synthase; VS, 100.0 1.9E-77 6.6E-82 604.4 39.7 401 1-429 3-416 (421)
2 4g22_A Hydroxycinnamoyl-COA sh 100.0 2.2E-77 7.6E-82 607.1 37.3 396 1-420 6-434 (439)
3 2xr7_A Malonyltransferase; xen 100.0 3.8E-70 1.3E-74 556.5 32.2 399 3-426 2-448 (453)
4 2e1v_A Acyl transferase; BAHD 100.0 1.4E-69 4.8E-74 552.4 31.6 397 2-426 6-448 (454)
5 2rkv_A Trichothecene 3-O-acety 100.0 6.9E-64 2.4E-68 510.2 25.5 385 25-429 5-448 (451)
6 1q9j_A PAPA5, polyketide synth 98.8 2.8E-07 9.6E-12 91.4 21.7 274 23-322 6-313 (422)
7 2jgp_A Tyrocidine synthetase 3 98.5 1.3E-05 4.5E-10 81.9 22.3 270 23-322 95-400 (520)
8 4hvm_A Tlmii; PSI-biology, mid 98.5 4.5E-06 1.5E-10 84.8 17.5 245 60-322 48-327 (493)
9 1l5a_A Amide synthase, VIBH; n 98.4 3.1E-06 1.1E-10 84.3 14.9 255 38-322 22-304 (436)
10 2xhg_A Tyrocidine synthetase A 98.3 0.00016 5.4E-09 72.5 23.0 250 60-324 51-337 (466)
11 2vsq_A Surfactin synthetase su 98.2 0.00017 5.7E-09 82.1 23.1 264 38-326 36-332 (1304)
12 3fot_A 15-O-acetyltransferase; 97.6 0.0039 1.3E-07 63.4 20.1 260 57-329 71-407 (519)
13 3cla_A Type III chloramphenico 66.3 3.2 0.00011 36.6 2.8 44 134-177 164-209 (213)
14 2i9d_A Chloramphenicol acetylt 65.1 3.5 0.00012 36.5 2.8 28 149-176 189-216 (217)
15 1q23_A Chloramphenicol acetylt 64.3 3.7 0.00013 36.4 2.8 44 134-177 168-213 (219)
16 3b8k_A PDCE2;, dihydrolipoylly 62.4 4.6 0.00016 36.3 3.1 29 149-177 204-232 (239)
17 1scz_A E2, dihydrolipoamide su 59.5 5.1 0.00017 35.8 2.8 29 149-177 196-224 (233)
18 3rqc_A Probable lipoamide acyl 59.4 4.3 0.00015 36.1 2.3 29 149-177 187-215 (224)
19 1dpb_A Dihydrolipoyl-transacet 59.3 5 0.00017 36.1 2.8 29 149-177 208-236 (243)
20 2ii3_A Lipoamide acyltransfera 57.9 5.5 0.00019 36.3 2.8 29 149-177 224-252 (262)
21 3mae_A 2-oxoisovalerate dehydr 51.3 8.3 0.00028 35.0 2.8 29 149-177 210-238 (256)
22 3l60_A Branched-chain alpha-ke 49.8 9 0.00031 34.6 2.8 29 149-177 205-233 (250)
23 2xl1_A Arginine attenuator pep 45.5 11 0.00038 20.2 1.5 18 239-256 7-24 (26)
24 3dva_I Dihydrolipoyllysine-res 35.9 7.7 0.00026 38.1 0.0 29 149-177 391-419 (428)
No 1
>2bgh_A Vinorine synthase; VS, BAHD, acetyltransferase, auto-rickshaw, transferase; 2.6A {Rauvolfia serpentina}
Probab=100.00 E-value=1.9e-77 Score=604.38 Aligned_cols=401 Identities=33% Similarity=0.609 Sum_probs=339.6
Q ss_pred CeEEEEeeeeecCCCCCCCCCCccccCCcCcCCCCCCCccEEEEecCCCCCCCCCCchHHHHHHHHHHHHHhhhccCCCC
Q 035869 1 MEVQILSKKLIKPSIISIPNHPKHMKVSFIDQHAPPVYMPFIFYYPANDNNNNKPQNIVTINLLQKSLSEILTLYYPLAG 80 (429)
Q Consensus 1 ~~v~~~~~~~V~P~~~p~~~~~~~~~Ls~lD~~~~~~y~~~~~~f~~~~~~~~~~~~~~~~~~L~~sL~~~L~~~p~LaG 80 (429)
|+|+++++++|+|+. |+|.+.+.++||+||+..++.|++.+|||+.++..+ .+....+++||+||+++|++||+|||
T Consensus 3 m~v~v~~~~~V~P~~-ptp~~~~~~~LS~lD~~~~~~~~~~~~~y~~~~~~~--~~~~~~~~~Lk~sLs~~L~~~~plAG 79 (421)
T 2bgh_A 3 PQMEKVSEELILPSS-PTPQSLKCYKISHLDQLLLTCHIPFILFYPNPLDSN--LDPAQTSQHLKQSLSKVLTHFYPLAG 79 (421)
T ss_dssp -CEEEEEEEEEECSS-CCCTTSCCCBCCHHHHTSCSSEEEEEEEECCCSSCC--CCHHHHHHHHHHHHHHHTTTSGGGGS
T ss_pred ceEEEeeeEEEeCCC-CCCCCCcccCCChHHhcccccccceEEEEeCCCccc--cchhhHHHHHHHHHHHHhhhcchhcc
Confidence 689999999999999 998766789999999987789999999999754310 13457899999999999999999999
Q ss_pred cccCCCcEEEeCCCCceEEEEEEcCchhhhhCCCCCcccccccccccc-CC----CCCCCeEEEEEEEEcCCeEEEEeee
Q 035869 81 RYDSENALVNCNDEGVEFIEAKVDGQLSRILNGEFETDLLNKFLPNGY-AE----SATSPLLATQINMFNCGGLAIGICM 155 (429)
Q Consensus 81 rvv~~~~~i~~~~~gv~f~~a~~~~~l~~l~~~~p~~~~~~~l~p~~~-~~----~~~~Pll~vQvt~~~cgGl~l~~~~ 155 (429)
| ++++++|+||++||.|++++++.+++++....|+...+++|+|... .+ ..+.|++.+|||+|+|||++||+++
T Consensus 80 R-l~~~~~i~c~~~Gv~fv~A~~d~~l~~~~~~~p~~~~~~~l~p~~~~~~~~~~~~~~pll~vQvt~f~cgG~~lg~~~ 158 (421)
T 2bgh_A 80 R-INVNSSVDCNDSGVPFVEARVQAQLSQAIQNVVELEKLDQYLPSAAYPGGKIEVNEDVPLAVKISFFECGGTAIGVNL 158 (421)
T ss_dssp E-EETTTEEECCCCCEEEEEEEESSCHHHHHSCCSSGGGGGGGSSSCSSSSSSSCCCTTCSEEEEEEECTTSCEEEEEEE
T ss_pred c-cCCCcEEEEcCCceEEEEEEEcCCHHHHhccCCChHHHHhcCCCCCCccccccccCCceEEEEEEEEcCCCEEEEEEe
Confidence 9 6678999999999999999999999999763366556778887651 11 4568999999999999999999999
Q ss_pred ceeeechhhHHHHHHHHHHHhhCCCCCCCCCcccc-cccCCC-CCCCCCcccccCCCCCCCCeEEEEEEEcHHHHHHHHH
Q 035869 156 SHRIADGFAFSTFINAWAKSCRLGLNEVSSPSFEL-GIFFPA-VRDLPNIEAAAAPLKSGLKIVTKRFLFDGKAITKLKA 233 (429)
Q Consensus 156 ~H~v~Dg~~~~~fl~~wa~~~r~G~~~~~~P~~~r-~~l~~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Lk~ 233 (429)
||.++||.|+.+|+++||+++| |......|.++| ..+.++ + +.|. | .+....++..++|+|++++|++||+
T Consensus 159 ~H~v~Dg~~~~~fl~~wa~~~r-g~~~~~~P~~dr~~~l~p~~~-~~~~---~--~~~~~~~~~~~~f~f~~~~i~~LK~ 231 (421)
T 2bgh_A 159 SHKIADVLSLATFLNAWTATCR-GETEIVLPNFDLAARHFPPVD-NTPS---P--ELVPDENVVMKRFVFDKEKIGALRA 231 (421)
T ss_dssp ETTTCCHHHHHHHHHHHHHHHT-TCSCCCCCBCSHHHHHSCCCT-TCCC---C--CCCCCSSEEEEEEEECHHHHHHHHH
T ss_pred eEEechHHHHHHHHHHHHHHhc-CCCCCCCCccccccccCCCcc-cCCC---C--ccCCccceEEEEEEECHHHHHHHHH
Confidence 9999999999999999999999 875446789999 766665 4 4443 1 2223567899999999999999999
Q ss_pred Hcc----CCCCCchhhHHHHHHHHHHHHhhhccCCCcceEEEEEeecCCCCCCCCCCCcccccccccccccccccccccH
Q 035869 234 EVD----DRQVTRVQMVIALIWKAHISALRAKRGHLRDFLLMLPMNLRGKTVPRVSENCYGNLYKFTNPRFNADESNMEL 309 (429)
Q Consensus 234 ~~~----~~~~St~d~l~A~lW~~~~~Ar~~~~~~~~~~~l~~~vd~R~rl~pplp~~Y~GN~~~~~~~~~~~~~~~~~l 309 (429)
++. ..++|+||+|+|++|+|+++||....+.++++.+.++||+|+|++||+|.+||||++..+.+..++++ +.+|
T Consensus 232 ~a~~~~~~~~~St~d~l~A~iW~~~~~Ar~~~~~~~~~~~l~~~vd~R~rl~pplP~~y~GN~~~~~~~~~~~~~-~~~l 310 (421)
T 2bgh_A 232 QASSASEEKNFSRVQLVVAYIWKHVIDVTRAKYGAKNKFVVVQAVNLRSRMNPPLPHYAMGNIATLLFAAVDAEW-DKDF 310 (421)
T ss_dssp HTC-----CCCCHHHHHHHHHHHHHHHHHHHHSCCCSCEEEEEEEESGGGSSSCCCTTBCSCCEEEEEEEECTTC-CCCG
T ss_pred HhhccCCCCCCchhHhHHHHHHHHHHHHhcccCCCCCceEEEEEecCccccCCCCCCCccceEEEEEEEEecccc-cccH
Confidence 987 15799999999999999999997643334689999999999999999999999999999988888775 7889
Q ss_pred HHHHHHHHHHhhcCCccccccccCCCchhhHHHHHHHHHHhhhhccCCCCeEEEeccCCCCcc-ccccccccceeeccc-
Q 035869 310 HNFVDLIGNAFRNPSLDSAKTDEFGDDDFFSAVIDSYKEYCEELNKDEADVCTYTSCCRFPIY-VDFGWGKPAWVSGIR- 387 (429)
Q Consensus 310 ~~~A~~iR~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tsw~~~~~~-~DFG~G~p~~v~~~~- 387 (429)
+++|..||++++++++++++ ++ .++.+..... .+.+.+++|||+++++| +|||||+|+++++..
T Consensus 311 ~~~a~~ir~ai~~~~~~~~~--~~----------~~~~~~~~~~--~~~~~~~vssw~~~~~y~~DFGwGkP~~v~~~~~ 376 (421)
T 2bgh_A 311 PDLIGPLRTSLEKTEDDHNH--EL----------LKGMTCLYEL--EPQELLSFTSWCRLGFYDLDFGWGKPLSACTTTF 376 (421)
T ss_dssp GGGHHHHHHHTCCCSSCHHH--HH----------HHHHHHHHTS--CGGGEEEEEEETTSCGGGCCSSSCCCSEEECCCC
T ss_pred HHHHHHHHHHHHHHHHHHHH--HH----------HHHHHHhhcc--CCCCeEEEeccccCCCcccccCCCccCeeccccc
Confidence 99999999999999988877 32 1233322111 22356999999999999 999999999999877
Q ss_pred ccccEEEEeecCCCCeEEEEEECCHHHHHhhhcChhhhhccC
Q 035869 388 MSFETVILLDNKEGNAIEAWVSLEEENMFHFLQDPYISRNCT 429 (429)
Q Consensus 388 ~~~g~~~i~p~~~~~g~ev~v~L~~~~m~~l~~d~~~~~~~~ 429 (429)
+.+|+++++|+++++|++|.|+|++++|++|++ ||.+|++
T Consensus 377 ~~~g~~~~~p~~~~~gi~v~v~L~~~~m~~f~~--e~~~~~~ 416 (421)
T 2bgh_A 377 PKRNAALLMDTRSGDGVEAWLPMAEDEMAMLPV--ELLSLVD 416 (421)
T ss_dssp CSTTEEEEEECTTSSSEEEEEEEEHHHHHHSCH--HHHTTBC
T ss_pred CcCCEEEEEecCCCCeEEEEEEcCHHHHHHHHH--HHHHhhc
Confidence 678999999999888999999999999999998 9999985
No 2
>4g22_A Hydroxycinnamoyl-COA shikimate/quinate hydroxycinnamoyltransferase; BAHD superfamily; 1.70A {Coffea canephora} PDB: 4g2m_A 4g0b_A
Probab=100.00 E-value=2.2e-77 Score=607.07 Aligned_cols=396 Identities=23% Similarity=0.396 Sum_probs=327.5
Q ss_pred CeEEEEeeeeecCCCCCCCCCCccccCCcCcCCCCCCCccEEEEecCCCCCCCCCCchHHHHHHHHHHHHHhhhccCCCC
Q 035869 1 MEVQILSKKLIKPSIISIPNHPKHMKVSFIDQHAPPVYMPFIFYYPANDNNNNKPQNIVTINLLQKSLSEILTLYYPLAG 80 (429)
Q Consensus 1 ~~v~~~~~~~V~P~~~p~~~~~~~~~Ls~lD~~~~~~y~~~~~~f~~~~~~~~~~~~~~~~~~L~~sL~~~L~~~p~LaG 80 (429)
|+|+++++++|+|+. |+|. +.++||+||+.+++.|++.+|||+.+.. +....+++||+||+++|++||||||
T Consensus 6 ~~V~i~~~~~V~P~~-~tp~--~~~~LS~lD~~~~~~~~~~~~~y~~~~~-----~~~~~~~~Lk~sLs~~L~~f~plAG 77 (439)
T 4g22_A 6 MKIEVKESTMVRPAQ-ETPG--RNLWNSNVDLVVPNFHTPSVYFYRPTGS-----SNFFDAKVLKDALSRALVPFYPMAG 77 (439)
T ss_dssp CCEEEEEEEEECCSS-CCCC--CEECCCHHHHSCCTTCCCEEEEECCCSC-----TTTTCHHHHHHHHHHHTTTTGGGGC
T ss_pred eEEEEeeeEEEeCCC-CCCC--CeecCChhHhCccccceeeEEEEcCCCC-----ccccHHHHHHHHHHHHHhhccccce
Confidence 689999999999999 9985 4699999999988999999999997543 1234689999999999999999999
Q ss_pred cccC---CCcEEEeCCCCceEEEEEEcCchhhhhCCCCCccccccccccc--cCCCCCCCeEEEEEEEEcCCeEEEEeee
Q 035869 81 RYDS---ENALVNCNDEGVEFIEAKVDGQLSRILNGEFETDLLNKFLPNG--YAESATSPLLATQINMFNCGGLAIGICM 155 (429)
Q Consensus 81 rvv~---~~~~i~~~~~gv~f~~a~~~~~l~~l~~~~p~~~~~~~l~p~~--~~~~~~~Pll~vQvt~~~cgGl~l~~~~ 155 (429)
|+.. |+++|+||++||.|++|++|.+++|+....| ...+++|+|.. ..+..+.|++.+|||+|+|||++||+++
T Consensus 78 Rl~~~~~g~~~i~c~~~Gv~fv~A~~d~~l~~l~~~~p-~~~~~~l~p~~~~~~~~~~~pll~vQvT~f~cGG~~lg~~~ 156 (439)
T 4g22_A 78 RLKRDEDGRIEIECNGEGVLFVEAESDGVVDDFGDFAP-TLELRRLIPAVDYSQGISSYALLVLQVTYFKCGGVSLGVGM 156 (439)
T ss_dssp EEEECTTSCEEEECCCCCEEEEEEEESSCGGGGTTCCC-CGGGGGGSCCCCTTSCTTSSCSEEEEEEECTTSCEEEEEEE
T ss_pred eeeeCCCCCEEEEECCCCCEEEEEEcCCcHHHhcCCCC-CHHHHhcCCCCCcccccccCceeEEEEEEecCCCEEEEEEe
Confidence 9543 5799999999999999999999999965233 34667888865 2234568999999999999999999999
Q ss_pred ceeeechhhHHHHHHHHHHHhhCCCCCCCCCcccccccCC---CCC--CCCCcccccCC---C----CCC-CCeEEEEEE
Q 035869 156 SHRIADGFAFSTFINAWAKSCRLGLNEVSSPSFELGIFFP---AVR--DLPNIEAAAAP---L----KSG-LKIVTKRFL 222 (429)
Q Consensus 156 ~H~v~Dg~~~~~fl~~wa~~~r~G~~~~~~P~~~r~~l~~---~~~--~~p~~~~~~~~---~----~~~-~~~~~~~~~ 222 (429)
||.++||.|+.+|+++||+++| |.+....|++||+.+.+ +.. +++++..+... . ... .+++.++|+
T Consensus 157 ~H~v~Dg~~~~~Fl~~wa~~~r-g~~~~~~P~~dr~~l~~~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~ 235 (439)
T 4g22_A 157 RHHAADGFSGLHFINSWSDMAR-GLDVTLPPFIDRTLLRARDPPQPQFQHIEYQPPPALAVSPQTAASDSVPETAVSIFK 235 (439)
T ss_dssp CTTTCCHHHHHHHHHHHHHHHT-TCCCSSCCBCCGGGGCCCSSCCCSSCCGGGSCCC---------------CEEEEEEE
T ss_pred eeccCcHHHHHHHHHHHHHHhC-CCCCCCCCccccccccCCCCCCCCcCcccccCCCCCcccccccccCCcccceEEEEE
Confidence 9999999999999999999999 98766789999986542 221 11112111000 0 112 578999999
Q ss_pred EcHHHHHHHHHHcc----CCCCCchhhHHHHHHHHHHHHhhhccCCCcceEEEEEeecCCCCCCCCCCCccccccccccc
Q 035869 223 FDGKAITKLKAEVD----DRQVTRVQMVIALIWKAHISALRAKRGHLRDFLLMLPMNLRGKTVPRVSENCYGNLYKFTNP 298 (429)
Q Consensus 223 ~~~~~l~~Lk~~~~----~~~~St~d~l~A~lW~~~~~Ar~~~~~~~~~~~l~~~vd~R~rl~pplp~~Y~GN~~~~~~~ 298 (429)
|++++|++||+++. ..++|+||+|+||+|+|+++||+..+ ++.+.+.++||+|+|++||+|++||||++..+.+
T Consensus 236 fs~~~i~~LK~~a~~~~~~~~~St~dal~A~iWr~~~rAr~~~~--~~~~~l~~~vd~R~rl~Pplp~~Y~GN~v~~~~~ 313 (439)
T 4g22_A 236 LTREQISALKAKSKEDGNTISYSSYEMLAGHVWRCACKARGLEV--DQGTKLYIATDGRARLRPSLPPGYFGNVIFTATP 313 (439)
T ss_dssp ECHHHHHHHHHGGGGGGCCCCCCHHHHHHHHHHHHHHHHTTCCT--TCEEEEEEEEECTTTSSSCCCTTBCSCCEEEECC
T ss_pred ECHHHHHHHHHHhhccCCCCCccHHHHHHHHHHHHHHHhcCCCC--CCcEEEEEEEcccCCCCCCCCCCcccceeehhhc
Confidence 99999999999987 25799999999999999999998654 4789999999999999999999999999999999
Q ss_pred cccccc-ccccHHHHHHHHHHHhhcCCccccccccCCCchhhHHHHHHHHHHhh---hh----ccCCCCeEEEeccCCCC
Q 035869 299 RFNADE-SNMELHNFVDLIGNAFRNPSLDSAKTDEFGDDDFFSAVIDSYKEYCE---EL----NKDEADVCTYTSCCRFP 370 (429)
Q Consensus 299 ~~~~~~-~~~~l~~~A~~iR~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~----~~~~~~~~~~tsw~~~~ 370 (429)
.+++++ .+.+|+++|.+||++|+++|++|++ ++ ++ |++..+ .+ ...+...+++|||++++
T Consensus 314 ~~~~~el~~~~L~~~A~~Ir~ai~~~~~e~~~--~~---------~~-~~~~~~~~~~~~~~~~~~~~~~~~vssw~r~~ 381 (439)
T 4g22_A 314 IAIAGDLEFKPVWYAASKIHDALARMDNDYLR--SA---------LD-YLELQPDLKALVRGAHTFKCPNLGITSWVRLP 381 (439)
T ss_dssp EEEHHHHHHSCHHHHHHHHHHHHHTCSHHHHH--HH---------HH-HHHTCSCSTTCCCCHHHHCTTCEEEEECTTSC
T ss_pred ceEHHHHhhCcHHHHHHHHHHHHHhhCHHHHH--HH---------HH-HHHhCccchhhcccCCcCcCCcEEEeecCcCC
Confidence 888888 7789999999999999999999988 52 22 544321 11 11112359999999999
Q ss_pred cc-ccccccccceeeccc-ccccEEEEeecCCC-CeEEEEEECCHHHHHhhhc
Q 035869 371 IY-VDFGWGKPAWVSGIR-MSFETVILLDNKEG-NAIEAWVSLEEENMFHFLQ 420 (429)
Q Consensus 371 ~~-~DFG~G~p~~v~~~~-~~~g~~~i~p~~~~-~g~ev~v~L~~~~m~~l~~ 420 (429)
+| +|||||+|+++++.. +.+|.++++|++++ ||++|.|+|++++|++|++
T Consensus 382 ~y~~DFGwGkP~~~~~~~~~~~g~~~~~p~~~~~ggi~v~v~L~~~~m~~f~~ 434 (439)
T 4g22_A 382 IHDADFGWGRPIFMGPGGIAYEGLSFILPSPTNDGSMSVAISLQGEHMKLFQS 434 (439)
T ss_dssp TTCCCCSSCCCSEEEESSCCSTTEEEEEECTTCSSCEEEEEEEEHHHHHHHHH
T ss_pred ccccccCCCCcceeeccccCCCcEEEEeecCCCCCcEEEEEECCHHHHHHHHH
Confidence 99 999999999999877 77899999999764 5899999999999999987
No 3
>2xr7_A Malonyltransferase; xenobiotics, naphthols; HET: MLC; 3.10A {Nicotiana tabacum}
Probab=100.00 E-value=3.8e-70 Score=556.53 Aligned_cols=399 Identities=20% Similarity=0.296 Sum_probs=319.3
Q ss_pred EEEEeeeeecCCCCCCCCCCccccCCcCcCCC-CCCCccEEEEecCCCCCCCCCC--chHHHHHHHHHHHHHhhhccCCC
Q 035869 3 VQILSKKLIKPSIISIPNHPKHMKVSFIDQHA-PPVYMPFIFYYPANDNNNNKPQ--NIVTINLLQKSLSEILTLYYPLA 79 (429)
Q Consensus 3 v~~~~~~~V~P~~~p~~~~~~~~~Ls~lD~~~-~~~y~~~~~~f~~~~~~~~~~~--~~~~~~~L~~sL~~~L~~~p~La 79 (429)
|+++++++|+|+. |++. .+.++||+||+.. ...|++.+|||+.+... + .+..+++||+||+++|++||+||
T Consensus 2 v~v~~~~~V~P~~-~~~~-~~~~~LS~lD~~~~~~~~~~~~~~y~~~~~~----~~~~~~~~~~Lk~sLs~~L~~~~plA 75 (453)
T 2xr7_A 2 ASVIEQCQVVPSP-GSAT-ELTLPLTYFDHVWLAFHRMRRILFYKLPISR----PDFVQTIIPTLKDSLSLTLKYYLPLA 75 (453)
T ss_dssp CEEEEESCCCCCT-TCCS-EEEEECCHHHHGGGGSCCEEEEEEEECCCCS----HHHHHTHHHHHHHHHHHHHTTSGGGG
T ss_pred eEEEEEEEecCCC-CCCC-CceECCCHHHhhhhhcCCccEEEEEeCCCCC----chhHHHHHHHHHHHHHHHhhhccccC
Confidence 8999999999998 7543 3689999999974 45799999999965421 2 34578999999999999999999
Q ss_pred Cccc-----CCCcEEEeC-CCCceEEEEEEcCchhhhhCCC-CCccccccccccccCCCCC-----CCeEEEEEEEEcCC
Q 035869 80 GRYD-----SENALVNCN-DEGVEFIEAKVDGQLSRILNGE-FETDLLNKFLPNGYAESAT-----SPLLATQINMFNCG 147 (429)
Q Consensus 80 Grvv-----~~~~~i~~~-~~gv~f~~a~~~~~l~~l~~~~-p~~~~~~~l~p~~~~~~~~-----~Pll~vQvt~~~cg 147 (429)
||+. .|+++|+|+ ++||.|++++++.+++++.... ++...+++|+|.......+ .|++.+|||+|+||
T Consensus 76 GRl~~~~~~~g~~~i~c~~~~gv~fv~A~~~~~l~~l~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~pll~vQvT~f~cG 155 (453)
T 2xr7_A 76 GNVACPQDWSGYPELRYVTGNSVSVIFSESDMDFNYLIGYHPRNTKDFYHFVPQLAEPKDAPGVQLAPVLAIQVTLFPNH 155 (453)
T ss_dssp SCCEEESSTTCCCEEEEETTCCCEEEEEECCSCHHHHTCSSCCCGGGGGGGSCCCCCCEEETTEEECCCEEEEEEEETTT
T ss_pred eeEEccCCCCCCEEEEecCCCceEEEEEecCCCHHHhhccCCCChhhhhcCCCCCCCcccccccccCCeEEEEEEEccCC
Confidence 9953 247999999 5999999999999999997533 2445667888865211122 79999999999999
Q ss_pred eEEEEeeeceeeechhhHHHHHHHHHHHhhCCC-C----CCCCCcccccccCCCCCCC-----CCccc-ccC-CC---CC
Q 035869 148 GLAIGICMSHRIADGFAFSTFINAWAKSCRLGL-N----EVSSPSFELGIFFPAVRDL-----PNIEA-AAA-PL---KS 212 (429)
Q Consensus 148 Gl~l~~~~~H~v~Dg~~~~~fl~~wa~~~r~G~-~----~~~~P~~~r~~l~~~~~~~-----p~~~~-~~~-~~---~~ 212 (429)
|++||+++||.++||.|+.+|+++||+++|.|. . ....|.+||+.+.+|. .+ ..+.. +.. +. ..
T Consensus 156 G~~lg~~~~H~v~Dg~~~~~Fl~~wa~~~r~G~~~~~~~~~~~P~~dr~~l~~p~-~~~~~~~~~~~~~~~~~~~~~~~~ 234 (453)
T 2xr7_A 156 GISIGFTNHHVAGDGATIVKFVRAWALLNKFGGDEQFLANEFIPFYDRSVIKDPN-GVGMSIWNEMKKYKHMMKMSDVVT 234 (453)
T ss_dssp EEEEEEEECTTTCCSHHHHHHHHHHHHHHHTTTCGGGSCGGGSCBCCCSSSCCSS-CHHHHTTTTGGGCTTTSCCSCCCC
T ss_pred cEEEEEeeeeeeechhHHHHHHHHHHHHhhcCCCcccCCCCCCCccccccccCCC-CcchHHHHhccccCCccccccccC
Confidence 999999999999999999999999999999434 2 1346899998776443 21 11100 100 00 12
Q ss_pred CCCeEEEEEEEcHHHHHHHHHHcc---C--CCCCchhhHHHHHHHHHHHHhhhc--c-CCCcceEEEEEeecCCCCCCCC
Q 035869 213 GLKIVTKRFLFDGKAITKLKAEVD---D--RQVTRVQMVIALIWKAHISALRAK--R-GHLRDFLLMLPMNLRGKTVPRV 284 (429)
Q Consensus 213 ~~~~~~~~~~~~~~~l~~Lk~~~~---~--~~~St~d~l~A~lW~~~~~Ar~~~--~-~~~~~~~l~~~vd~R~rl~ppl 284 (429)
..+.+.++|+|++++|++||+++. . .++|+||+|+|++|+|+++||... . +.++++.+.++||+|+|++||+
T Consensus 235 ~~~~~~~~f~f~~~~i~~Lk~~a~~~~~~~~~~St~~~l~A~lW~~~~~Ar~~~~~~~~~~~~~~l~~~vd~R~rl~ppl 314 (453)
T 2xr7_A 235 PPDKVRGTFIITRHDIGKLKNLVLTRRPKLTHVTSFTVTCAYVWTCIIKSEAATGEEIDENGMEFFGCAADCRAQFNPPL 314 (453)
T ss_dssp CCSCCCEEEEECHHHHHHHHHHHHHHSCCCSCCCHHHHHHHHHHHHHHHHHHHTTCCCCTTSEEEEEEECCTTSCSSSCC
T ss_pred CCCceEEEEEECHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHHHHHHHHhccccccCCCCcceEEEEEecccccCCCCC
Confidence 346778999999999999999986 1 579999999999999999999862 0 2247899999999999999999
Q ss_pred CCCccccccccccccccccc-c-cccHHHHHHHHHHHhhc--CCcc-ccccccCCCchhhHHHHHHHHHHhhhhccCCCC
Q 035869 285 SENCYGNLYKFTNPRFNADE-S-NMELHNFVDLIGNAFRN--PSLD-SAKTDEFGDDDFFSAVIDSYKEYCEELNKDEAD 359 (429)
Q Consensus 285 p~~Y~GN~~~~~~~~~~~~~-~-~~~l~~~A~~iR~ai~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (429)
|.+||||++..+.+.+++++ . +.+|+++|..||++|++ .+++ |++ + + |++..+.+ .+..
T Consensus 315 P~~Y~GN~~~~~~~~~~~~el~~~~~l~~~a~~Ir~ai~~~~~~~e~~~~--~--~----------~~~~~~~~--~~~~ 378 (453)
T 2xr7_A 315 PPSYFGNALVGYVARTRQVDLAGKEGFTIAVELIGEAIRKRMKDEEWILS--G--S----------WFKEYDKV--DAKR 378 (453)
T ss_dssp CTTBCSCCCCEEEEEEEHHHHTSSSHHHHHHHHHHHHHTTSSSCHHHHHS--S--C----------TTSCCCCS--CGGG
T ss_pred CcccccceeeeeeeeeeHHHhcCcchHHHHHHHHHHHHHhhccCCccchh--h--H----------HHHHHHhh--ccCC
Confidence 99999999999998888887 5 48999999999999999 5777 888 4 2 22222222 1123
Q ss_pred eEEEeccCCCCcc-ccccccccceeeccc-cccc--EEEEeecCCCC-eEEEEEECCHHHHHhhhcChhhhh
Q 035869 360 VCTYTSCCRFPIY-VDFGWGKPAWVSGIR-MSFE--TVILLDNKEGN-AIEAWVSLEEENMFHFLQDPYISR 426 (429)
Q Consensus 360 ~~~~tsw~~~~~~-~DFG~G~p~~v~~~~-~~~g--~~~i~p~~~~~-g~ev~v~L~~~~m~~l~~d~~~~~ 426 (429)
.+++|||+++++| +|||||+|+++++.. +.+| .++|+|+++++ |++|.|+|++++|++|++ +|.+
T Consensus 379 ~~~vssw~~~~~y~~DFG~G~P~~v~~~~~~~~g~~~~~l~~~~~~~ggi~v~v~L~~~~m~~f~~--~~~~ 448 (453)
T 2xr7_A 379 SLSVAGSPKLDLYAADFGWGRPEKLEFVSIDNDDGISMSLSKSKDSDGDLEIGLSLSKTRMNAFAA--MFTH 448 (453)
T ss_dssp EEEECSCSSCCGGGCCCSSCSCSEEEEGGGSSCSSCEEEEEECSSSTTCEEEEECCCHHHHHHHHH--HHHH
T ss_pred cEEEeccccCCccccccCCCcceEEEeeeecCCCceEEEEeecCCCCCCEEEEEEeCHHHHHHHHH--HHHH
Confidence 6999999999999 999999999999877 6778 88899987754 899999999999999965 5544
No 4
>2e1v_A Acyl transferase; BAHD superfamily, seleno-methionine derivative, dendranthema morifolium, DMAT; 1.80A {Chrysanthemum x morifolium} PDB: 2e1u_A 2e1t_A
Probab=100.00 E-value=1.4e-69 Score=552.43 Aligned_cols=397 Identities=20% Similarity=0.311 Sum_probs=315.0
Q ss_pred eEEEEeeeeecCCCCCCCCCCccccCCcCcCCCC-CCCccEEEEecCCCCCCCCCC--chHHHHHHHHHHHHHhhhccCC
Q 035869 2 EVQILSKKLIKPSIISIPNHPKHMKVSFIDQHAP-PVYMPFIFYYPANDNNNNKPQ--NIVTINLLQKSLSEILTLYYPL 78 (429)
Q Consensus 2 ~v~~~~~~~V~P~~~p~~~~~~~~~Ls~lD~~~~-~~y~~~~~~f~~~~~~~~~~~--~~~~~~~L~~sL~~~L~~~p~L 78 (429)
+|+++++++|+|+. |++. .+.++||+||+... ..|++.+|||+.+... + .+..+++||+||+++|++||+|
T Consensus 6 ~v~v~~~~~V~P~~-~~~~-~~~~~LS~lD~~~~~~~~~~~~~~y~~~~~~----~~~~~~~~~~Lk~sLs~~L~~~~pl 79 (454)
T 2e1v_A 6 ILTVLEQSQVSPPP-DTLG-DKSLQLTFFDFFWLRSPPINNLFFYELPITR----SQFTETVVPNIKHSLSITLKHFYPF 79 (454)
T ss_dssp CEEEEEEEEECCCT-TSCC-CEEEECCHHHHTTTTCCCEEEEEEEECCCCH----HHHHHTHHHHHHHHHHHHHTTCGGG
T ss_pred eEEEEEEEEEeCCC-CCCC-CceecCchHHhhhhccCCccEEEEEeCCCCc----chhhHHHHHHHHHHHHHHhhhcccc
Confidence 69999999999998 7543 37899999999754 5799999999965421 1 3357899999999999999999
Q ss_pred CCccc-C----CCcEEEeC-CCCceEEEEEEcCchhhhhCCCC-CccccccccccccC-----CCCCCCeEEEEEEEEcC
Q 035869 79 AGRYD-S----ENALVNCN-DEGVEFIEAKVDGQLSRILNGEF-ETDLLNKFLPNGYA-----ESATSPLLATQINMFNC 146 (429)
Q Consensus 79 aGrvv-~----~~~~i~~~-~~gv~f~~a~~~~~l~~l~~~~p-~~~~~~~l~p~~~~-----~~~~~Pll~vQvt~~~c 146 (429)
|||+. . |+++|+|+ ++||.|++++++.+++++....+ +...+++|+|.... +..+.|++.+|||+|+|
T Consensus 80 AGRl~~~~~~~g~~~i~c~~~~gv~fv~A~~~~~l~~l~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~pll~vQvT~f~c 159 (454)
T 2e1v_A 80 VGKLVVYPAPTKKPEICYVEGDSVAVTFAECNLDLNELTGNHPRNCDKFYDLVPILGESTRLSDCIKIPLFSVQVTLFPN 159 (454)
T ss_dssp GSEEEECSSSSSCCEEEECTTCCEEEEEEEECSCGGGTSSSSCEEGGGGGGGSCCCCCCEECSSCEEEECEEEEEEEETT
T ss_pred ceeeeeccCCCCCEEEEECCCCcEEEEEEEeCCCHHHhcCCCCCcchhhhcCCCCCCCcccccccccCceEEEEEEEecC
Confidence 99976 3 37999999 59999999999999999965332 33456788876511 11335999999999999
Q ss_pred CeEEEEeeeceeeechhhHHHHHHHHHHHhhCCCC-C-----CCCCcccccccCCCCCCCCCcc-c---c------cCCC
Q 035869 147 GGLAIGICMSHRIADGFAFSTFINAWAKSCRLGLN-E-----VSSPSFELGIFFPAVRDLPNIE-A---A------AAPL 210 (429)
Q Consensus 147 gGl~l~~~~~H~v~Dg~~~~~fl~~wa~~~r~G~~-~-----~~~P~~~r~~l~~~~~~~p~~~-~---~------~~~~ 210 (429)
||++||+++||.++||.|+.+|+++||+++|.|.. . ...|.+|| .+..|..+.+... . . ....
T Consensus 160 gG~~lg~~~~H~v~Dg~~~~~Fl~awa~~~r~g~~~~~~~~~~~~P~~dr-~l~~p~~~~~~~~~~~~~~~~~~~~~~~~ 238 (454)
T 2e1v_A 160 QGIAIGITNHHCLGDASTRFCFLKAWTSIARSGNNDESFLANGTRPLYDR-IIKYPMLDEAYLKRAKVESFNEDYVTQSL 238 (454)
T ss_dssp TEEEEEEEECGGGCCHHHHHHHHHHHHHHHHTTSCCHHHHHHSCCCBCCC-CCCCHHHHHHHHHHTTCTTHHHHCCCCCC
T ss_pred CcEEEEEEeeeeecchhHHHHHHHHHHHHhccCCCccccCCCCCCCcccc-cCCCCCcchHHHHhhhccccccccCcccC
Confidence 99999999999999999999999999999994442 1 35689998 5532110000000 0 0 0000
Q ss_pred CCCCCeEEEEEEEcHHHHHHHHHHcc---C--CCCCchhhHHHHHHHHHHHHhhhccCCCcceEEEEEeecCCCCCCCCC
Q 035869 211 KSGLKIVTKRFLFDGKAITKLKAEVD---D--RQVTRVQMVIALIWKAHISALRAKRGHLRDFLLMLPMNLRGKTVPRVS 285 (429)
Q Consensus 211 ~~~~~~~~~~~~~~~~~l~~Lk~~~~---~--~~~St~d~l~A~lW~~~~~Ar~~~~~~~~~~~l~~~vd~R~rl~pplp 285 (429)
....+.+.++|+|++++|++||+++. . .++|+||+|+|++|+|+++|| + ++.+.+.++||+|+|++||+|
T Consensus 239 ~~~~~~~~~~f~f~~~~i~~LK~~a~~~~~~~~~~St~d~l~A~lWr~~~~Ar---~--~~~~~l~~~vd~R~rl~pplP 313 (454)
T 2e1v_A 239 AGPSDKLRATFILTRAVINQLKDRVLAQLPTLEYVSSFTVACAYIWSCIAKSR---N--DKLQLFGFPIDRRARMKPPIP 313 (454)
T ss_dssp CCCCCEEEEEEEECHHHHHHHHHHHHHHCTTCSCCCHHHHHHHHHHHHHHHHH---C--CSEEEEEEEEECGGGSSSCCC
T ss_pred CCCCCceEEEEEECHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHHHHHhhhc---C--CCceEEEEEecchhccCCCCC
Confidence 12356789999999999999999986 1 579999999999999999998 3 378999999999999999999
Q ss_pred CCccccccccccccccccc-c-cccHHHHHHHHHHHhhcCC----cccccccc-CCCchhhHHHHHHHHHHhhhhccCCC
Q 035869 286 ENCYGNLYKFTNPRFNADE-S-NMELHNFVDLIGNAFRNPS----LDSAKTDE-FGDDDFFSAVIDSYKEYCEELNKDEA 358 (429)
Q Consensus 286 ~~Y~GN~~~~~~~~~~~~~-~-~~~l~~~A~~iR~ai~~~~----~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (429)
.+||||++..+.+.+++++ . +.+|+++|..||++|++++ +++++ + +. +|++....+ . +.
T Consensus 314 ~~Y~GN~~~~~~~~~~~~el~~~~~l~~~a~~Ir~ai~~~~~~~~~~~~~--~~~~----------~~~~~~~~~-~-~~ 379 (454)
T 2e1v_A 314 TAYFGNCVGGCAAIAKTNLLIGKEGFITAAKLIGENLHKTLTDYKDGVLK--DDME----------SFNDLVSEG-M-PT 379 (454)
T ss_dssp TTBCSCCEEEEEEEEEGGGTSHHHHHHHHHHHHHHHHHHHHHHHHTTCCC--C---------------CHHHHHC-C-CS
T ss_pred cccccceeeeEEeecchhhccccccHHHHHHHHHHHHHhhhhhhhHHHHH--HHHH----------HHHHHHHhh-c-CC
Confidence 9999999999998888888 5 4899999999999999997 44555 3 21 143322222 1 22
Q ss_pred CeEEEeccCCCCcc-ccccccccceeeccc-ccccEEEEeecCCCC-eEEEEEECCHHHHHhhhcChhhhh
Q 035869 359 DVCTYTSCCRFPIY-VDFGWGKPAWVSGIR-MSFETVILLDNKEGN-AIEAWVSLEEENMFHFLQDPYISR 426 (429)
Q Consensus 359 ~~~~~tsw~~~~~~-~DFG~G~p~~v~~~~-~~~g~~~i~p~~~~~-g~ev~v~L~~~~m~~l~~d~~~~~ 426 (429)
..+++|||+++++| +|||||+|+++++.. +.+|.++|+|+++++ |++|.|+|++++|++|++ +|.+
T Consensus 380 ~~~~vssw~~~~~y~~DFG~G~P~~v~~~~~~~~g~~~l~p~~~~~ggi~v~v~L~~~~m~~f~~--~~~~ 448 (454)
T 2e1v_A 380 TMTWVSGTPKLRFYDMDFGWGKPKKLETVSIDHNGAISINSCKESNEDLEIGVCISATQMEDFVH--IFDD 448 (454)
T ss_dssp EEEEEECCTTSCGGGCCSSSCSCSEEEEGGGGGSSEEEEEECSSCTTSEEEEEEEEHHHHHHHHH--HHHH
T ss_pred ceEEEecCCCCCcccccccCccceEEEeeeeCCCCeEEEEecCCCCCCEEEEEEECHHHHHHHHH--HHHH
Confidence 36999999999999 999999999999877 678999999987754 899999999999999965 5554
No 5
>2rkv_A Trichothecene 3-O-acetyltransferase; BAHD superfamily, deoxyniv T-2, acetyl COA, fusarium; HET: COA MPO ZBA; 1.60A {Gibberella zeae} PDB: 3b2s_A* 3b30_A* 2rkt_A* 2zba_A*
Probab=100.00 E-value=6.9e-64 Score=510.24 Aligned_cols=385 Identities=17% Similarity=0.233 Sum_probs=295.7
Q ss_pred ccCCcCcCCC--CCCCccEEEEecCCCCCCCCCCchHHHHHHHHHHHHHhhhccCCCCcccC--------CCcEEEeCCC
Q 035869 25 MKVSFIDQHA--PPVYMPFIFYYPANDNNNNKPQNIVTINLLQKSLSEILTLYYPLAGRYDS--------ENALVNCNDE 94 (429)
Q Consensus 25 ~~Ls~lD~~~--~~~y~~~~~~f~~~~~~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGrvv~--------~~~~i~~~~~ 94 (429)
++||.|||+. ++.|++.+|||+.++.. +.+..+++||+||+++|++|||||||+.. |+++|+|+++
T Consensus 5 ~~Ls~lD~~~~~~~~y~~~~~~y~~~~~~----~~~~~~~~Lk~sLs~~L~~~~plAGRl~~~~~~~~~~g~~~i~~~~~ 80 (451)
T 2rkv_A 5 IQLDTLGQLPGLLSIYTQISLLYPVSDSS----QYPTIVSTFEQGLKRFSEAVPWVAGQVKAEGISEGNTGTSFIVPFED 80 (451)
T ss_dssp EECCGGGGCTTGGGCEEEEEEEEECSCGG----GHHHHHHHHHHHHHHHHHHSGGGGCEEEEESCBTTBCCEEEEECCCS
T ss_pred ccCChhhcCccccccceeEEEEEECCCCC----CHHHHHHHHHHHHHHHHHhCCceeEEEEECCCCCCCCCcEEEeecCC
Confidence 7899999987 58999999999964321 34578999999999999999999999543 2578988877
Q ss_pred CceEEEEEEcC-----chhhhhCCCCCccccc--cccccc-----cC--CCCCCCeEEEEEEEEcCCeEEEEeeeceeee
Q 035869 95 GVEFIEAKVDG-----QLSRILNGEFETDLLN--KFLPNG-----YA--ESATSPLLATQINMFNCGGLAIGICMSHRIA 160 (429)
Q Consensus 95 gv~f~~a~~~~-----~l~~l~~~~p~~~~~~--~l~p~~-----~~--~~~~~Pll~vQvt~~~cgGl~l~~~~~H~v~ 160 (429)
+..|++++++. ++++|....++...++ .|.|.. .. ...+.|++.+|||++ |||++||+++||.++
T Consensus 81 ~~~~~va~~~~d~~~p~~~~l~~~~~p~~~~~~~~~~p~~~~p~~~~~~~~~~~pll~vQvT~~-~GG~~lg~~~~H~v~ 159 (451)
T 2rkv_A 81 VPRVVVKDLRDDPSAPTIEGMRKAGYPMAMFDENIIAPRKTLPIGPGTGPDDPKPVILLQLNFI-KGGLILTVNGQHGAM 159 (451)
T ss_dssp SCEEEEEECTTCTTSCBHHHHHHHTSCGGGSBHHHHCSSCSSSCSTTCSTTSCCBSEEEEEEEE-BTEEEEEEEEETTTC
T ss_pred CCeEEEEeCCCCCCCCCHHHHHHcCCChhhcCHhhcCCcccCCCCcccCCCCCCceEEEEEEEe-cCceeeeeeehhccc
Confidence 77799988764 6877753222212222 233321 11 234589999999966 799999999999999
Q ss_pred chhhHHHHHHHHHHHhhCCCCCC----CCCcccccccCCCCC-CCC-------CcccccC---CCCCCCCeEEEEEEEcH
Q 035869 161 DGFAFSTFINAWAKSCRLGLNEV----SSPSFELGIFFPAVR-DLP-------NIEAAAA---PLKSGLKIVTKRFLFDG 225 (429)
Q Consensus 161 Dg~~~~~fl~~wa~~~r~G~~~~----~~P~~~r~~l~~~~~-~~p-------~~~~~~~---~~~~~~~~~~~~~~~~~ 225 (429)
||.|+.+|+++||++|| |.+.. ..|.+||+.+.|... ..| .+..+.. ......++..++|+|++
T Consensus 160 Dg~g~~~Fl~awa~~~r-g~~~~~~~~~~p~~dr~~~~p~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~f~~ 238 (451)
T 2rkv_A 160 DMVGQDAVIRLLSKACR-NDPFTEEEMTAMNLDRKTIVPYLENYTIGPEVDHQIVKADVAGGDAVLTPVSASWAFFTFSP 238 (451)
T ss_dssp CHHHHHHHHHHHHHHHH-TCCCCHHHHHHTTCCSTTSSCCCTTCCCCGGGTTCBCCTTSCC-------CCEEEEEEEECH
T ss_pred cHHHHHHHHHHHHHHhc-CCCCCccccccccCchhhccccccccCCCccccccccCCCCCCCCCCCCCCCceEEEEEECH
Confidence 99999999999999999 97532 257888875544210 111 1111100 11234568899999999
Q ss_pred HHHHHHHHHcc------CCCCCchhhHHHHHHHHHHHHhhhccCCCcceEEEEEeecCCCCCCCCCCCcccccccccccc
Q 035869 226 KAITKLKAEVD------DRQVTRVQMVIALIWKAHISALRAKRGHLRDFLLMLPMNLRGKTVPRVSENCYGNLYKFTNPR 299 (429)
Q Consensus 226 ~~l~~Lk~~~~------~~~~St~d~l~A~lW~~~~~Ar~~~~~~~~~~~l~~~vd~R~rl~pplp~~Y~GN~~~~~~~~ 299 (429)
++|++||+++. +.++|+||+|+|++|+|+++||....+.++++.+.++||+|+|++ +|.+||||++..+.+.
T Consensus 239 ~~i~~LK~~a~~~~~~~~~~~St~d~l~A~~Wr~~~~Ar~~~~~~~~~~~l~~~vd~R~rl~--lP~~y~GN~~~~~~~~ 316 (451)
T 2rkv_A 239 KAMSELKDAATKTLDASTKFVSTDDALSAFIWKSASRVRLERIDGSAPTEFCRAVDARPAMG--VSNNYPGLLQNMTYHN 316 (451)
T ss_dssp HHHHHHHHHHHTTCCTTCSCCCHHHHHHHHHHHHHHHHHTTTSCTTSEEEEEEEEECHHHHT--CCTTCCSCCEEEEEEE
T ss_pred HHHHHHHHHHhhhccCCCCCccHHHHHHHHHHHHHHHHHhccCCCCCceEEEEEecccccCC--CCCCCcccceeeeccc
Confidence 99999999986 146999999999999999999821112247899999999999998 8999999999999888
Q ss_pred ccccc-ccccHHHHHHHHHHHhhcCCccc-cccccCCCchhhHHHHHHHHHHh---hhhc----cCCCCeEEEeccCCCC
Q 035869 300 FNADE-SNMELHNFVDLIGNAFRNPSLDS-AKTDEFGDDDFFSAVIDSYKEYC---EELN----KDEADVCTYTSCCRFP 370 (429)
Q Consensus 300 ~~~~~-~~~~l~~~A~~iR~ai~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~---~~~~----~~~~~~~~~tsw~~~~ 370 (429)
.++++ .+.+|+++|.+||+++.+++.++ ++ ++ .+ |++.. ..+. ......+++|||++++
T Consensus 317 ~~~~el~~~~L~~~a~~ir~ai~~~~~~~~~~--~~------~~----~~~~~~~~~~~~~~~~~~~~~~~~~ssw~~~~ 384 (451)
T 2rkv_A 317 STIGEIANESLGATASRLRSELDPASMRQRTR--GL------AT----YLHNNPDKSNVSLTADADPSTSVMLSSWAKVG 384 (451)
T ss_dssp EEHHHHHHSCHHHHHHHHHTTCCHHHHHHHHH--HH------HH----HHHHCSCCTTBCTTTTCCTTTCEEEEECTTCC
T ss_pred CcHHHhccchHHHHHHHHHHHhcccCchhHHH--HH------HH----HHhcCCCccccccccccCCCCCEEEeccccCC
Confidence 88877 78899999999999999988887 77 42 22 44432 1121 1112349999999999
Q ss_pred cc-cccc--ccccceeeccc--ccccEEEEeecCCCCeEEEEEECCHHHHHhhhcChhhhhccC
Q 035869 371 IY-VDFG--WGKPAWVSGIR--MSFETVILLDNKEGNAIEAWVSLEEENMFHFLQDPYISRNCT 429 (429)
Q Consensus 371 ~~-~DFG--~G~p~~v~~~~--~~~g~~~i~p~~~~~g~ev~v~L~~~~m~~l~~d~~~~~~~~ 429 (429)
+| +||| ||+|++++.+. +.+|.++++|...+||++|.|+|++++|++|++|+||++|++
T Consensus 385 ~y~~DFG~gwG~P~~v~~~~~~~~~g~~~~~p~~~~ggi~v~v~L~~~~m~~f~~d~ef~~~~~ 448 (451)
T 2rkv_A 385 LWDYDFGLGLGKPETVRRPIFEPVESLMYFMPKKPDGEFCAALSLRDEDMDRLKADKEWTKYAQ 448 (451)
T ss_dssp GGGCCTTCSSCSCSEEECCBCSCCTTEEEECCCCTTSCEEEEEEEEHHHHHHHHHCHHHHTTCE
T ss_pred ccccccCCCCCCceEEEcCCccCCCCEEEEecCCCCCCEEEEEEeCHHHHHHHhcCHHHHhhhe
Confidence 99 9998 79999998655 468999999876667899999999999999999999999984
No 6
>1q9j_A PAPA5, polyketide synthase associated protein 5; conjugating enzyme PAPA5, structural genomics, PSI protein structure initiative; 2.75A {Mycobacterium tuberculosis} SCOP: c.43.1.2 c.43.1.2
Probab=98.85 E-value=2.8e-07 Score=91.44 Aligned_cols=274 Identities=15% Similarity=0.098 Sum_probs=155.0
Q ss_pred ccccCCcCcCCCC--CCCccEEEEecCCCCCCCCCCchHHHHHHHHHHHHHhhhccCCCCcccC--CC-cEEEeCCCCce
Q 035869 23 KHMKVSFIDQHAP--PVYMPFIFYYPANDNNNNKPQNIVTINLLQKSLSEILTLYYPLAGRYDS--EN-ALVNCNDEGVE 97 (429)
Q Consensus 23 ~~~~Ls~lD~~~~--~~y~~~~~~f~~~~~~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGrvv~--~~-~~i~~~~~gv~ 97 (429)
..+|||++.+.+. .+++..++-++... ..++|++++.+++..+|.|-.++.. |. .++........
T Consensus 6 ~~~pls~~Q~~~~~~~y~~~~~~~l~g~l----------d~~~l~~A~~~lv~rh~~LRt~f~~~~~~~~q~v~~~~~~~ 75 (422)
T 1q9j_A 6 VIRKLSHSEEVFAQYEVFTSMTIQLRGVI----------DVDALSDAFDALLETHPVLASHLEQSSDGGWNLVADDLLHS 75 (422)
T ss_dssp EEEECCHHHHHHHHTTCEEEEEEEEESCC----------CHHHHHHHHHHHHHHCGGGSEEEEECTTSSEEEEECCSSSC
T ss_pred eeecCCHHHHHHHhcCceEEEEEEEecCC----------CHHHHHHHHHHHHHhCccceEEEEecCCcceeeeccCCCCC
Confidence 4588888876432 24455555555443 3899999999999999999888442 22 22222211111
Q ss_pred -EEEEEEcCchhhhhCCCCCccccccccccccCCCCCCCeEEEEEEEEcCCeEEEEeeeceeeechhhHHHHHHHHHHHh
Q 035869 98 -FIEAKVDGQLSRILNGEFETDLLNKFLPNGYAESATSPLLATQINMFNCGGLAIGICMSHRIADGFAFSTFINAWAKSC 176 (429)
Q Consensus 98 -f~~a~~~~~l~~l~~~~p~~~~~~~l~p~~~~~~~~~Pll~vQvt~~~cgGl~l~~~~~H~v~Dg~~~~~fl~~wa~~~ 176 (429)
+.+ .++..........+.-.| -+ ...|++++.+.. ..++..|.+.+||.++||.|+..|++.|.+.+
T Consensus 76 ~~~~-------~d~~~~~~~~~~~~~~~~---~d-~~~pl~r~~l~~-~~~~~~l~l~~hH~i~Dg~S~~~l~~~l~~~Y 143 (422)
T 1q9j_A 76 GICV-------IDGTAATNGSPSGNAELR---LD-QSVSLLHLQLIL-REGGAELTLYLHHCMADGHHGAVLVDELFSRY 143 (422)
T ss_dssp CCEE-------EC------------CCCC---CC-TTTCSEEEEEEC-CSSSCEEEEEEEGGGCCHHHHHHHHHHHHHHH
T ss_pred ceEE-------EECCCCCcchhhhcccCc---cC-CCCCcEEEEEEe-cCCCeEEEEEeceEEEchhhHHHHHHHHHHHH
Confidence 111 111110000000000011 12 467899888877 76889999999999999999999999999988
Q ss_pred hC----CCCCCC--CCccc-------ccccCC---C------CC----CCC-Cccccc-CCCCCCCCeEEEEEEEcHHHH
Q 035869 177 RL----GLNEVS--SPSFE-------LGIFFP---A------VR----DLP-NIEAAA-APLKSGLKIVTKRFLFDGKAI 228 (429)
Q Consensus 177 r~----G~~~~~--~P~~~-------r~~l~~---~------~~----~~p-~~~~~~-~~~~~~~~~~~~~~~~~~~~l 228 (429)
+. |.+... .+.-+ ...... + .. .++ ....|. .+...........+.++.+..
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~l~~~~~lp~~~~~~~~~~~~~~~~~l~~~~~ 223 (422)
T 1q9j_A 144 TDAVTTGDPGPITPQPTPLSMEAVLAQRGIRKQGLSGAERFMSVMYAYEIPATETPAVLAHPGLPQAVPVTRLWLSKQQT 223 (422)
T ss_dssp HHHHHSSSCCCCCCCCCCBCHHHHHHHSSCCC-----CTTSSTTTTCC-------------CCSBCCCCEEEECCCHHHH
T ss_pred HHhhccCCCCCCCCCCCCCCHHHHHHhcCCcccccchhhhhhhhhhcccCCCcccCCCCCCCCCCCCccceEEEeCHHHH
Confidence 72 222211 12111 000000 0 00 011 111110 011111223567888999999
Q ss_pred HHHHHHccCCCCCchhhHHHHHHHHHHHHhhhccCCCcceEEEEEeecCCCCCCCCCCCccccccccccccccccccccc
Q 035869 229 TKLKAEVDDRQVTRVQMVIALIWKAHISALRAKRGHLRDFLLMLPMNLRGKTVPRVSENCYGNLYKFTNPRFNADESNME 308 (429)
Q Consensus 229 ~~Lk~~~~~~~~St~d~l~A~lW~~~~~Ar~~~~~~~~~~~l~~~vd~R~rl~pplp~~Y~GN~~~~~~~~~~~~~~~~~ 308 (429)
++|++.|....+|.++++.|.+-..+.+-+. .+ .....+.+++++|....|+++..-+.|.+.+....+++. .+.+
T Consensus 224 ~~l~~~a~~~~~t~~~~l~aa~~~~l~r~~~--~~-~~~v~~g~~~~~R~~~~~~~~~~~~~~~vG~f~n~lp~~-~~~~ 299 (422)
T 1q9j_A 224 SDLMAFGREHRLSLNAVVAAAILLTEWQLRN--TP-HVPIPYVYPVDLRFVLAPPVAPTEATNLLGAASYLAEIG-PNTD 299 (422)
T ss_dssp HHHHHHHTTTTCCHHHHHHHHHHHHHHHHHT--CS-SCCEEEEEEEETTTTSSSCCCTTTBSCCEEEEEEEECCC-SSCC
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHhccc--CC-CceEEEeeeeecccccCCCCChhhhhhhheeeeeeeecc-CCCC
Confidence 9999998877899999999986555554321 12 256789999999998765543212233333333333433 2456
Q ss_pred HHHHHHHHHHHhhc
Q 035869 309 LHNFVDLIGNAFRN 322 (429)
Q Consensus 309 l~~~A~~iR~ai~~ 322 (429)
+.+++..+++.+.+
T Consensus 300 ~~~~l~~v~~~~~~ 313 (422)
T 1q9j_A 300 IVDLASDIVATLRA 313 (422)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 77788888877754
No 7
>2jgp_A Tyrocidine synthetase 3; multifunctional enzyme, antibiotic biosynthesis, condensatio domain, peptide bond formation, ligase; 1.85A {Brevibacillus brevis}
Probab=98.50 E-value=1.3e-05 Score=81.88 Aligned_cols=270 Identities=12% Similarity=0.084 Sum_probs=159.1
Q ss_pred ccccCCcCcC-------CCC---CCCccEEEEecCCCCCCCCCCchHHHHHHHHHHHHHhhhccCCCCcccC--CCc-EE
Q 035869 23 KHMKVSFIDQ-------HAP---PVYMPFIFYYPANDNNNNKPQNIVTINLLQKSLSEILTLYYPLAGRYDS--ENA-LV 89 (429)
Q Consensus 23 ~~~~Ls~lD~-------~~~---~~y~~~~~~f~~~~~~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGrvv~--~~~-~i 89 (429)
..+|||+.-+ ..+ .+++...+-++... ..++|++++.+++..+|.|--++.. |.+ ++
T Consensus 95 ~~~pls~~Q~~~~~~~~~~~~~~~y~~~~~~~l~g~l----------d~~~l~~A~~~lv~rh~~LRt~f~~~~~~~~q~ 164 (520)
T 2jgp_A 95 AYYPVSSAQKRMYILDQFEGVGISYNMPSTMLIEGKL----------ERTRVEAAFQRLIARHESLRTSFAVVNGEPVQN 164 (520)
T ss_dssp SSEECCHHHHHHHHHHHHTCCTTTTBCCEEEEEEECC----------CHHHHHHHHHHHHHHCGGGGEEEEEETTEEEEE
T ss_pred CCCCCCHHHHHHHHHHhcCCCCCcccceEEEEECCCC----------CHHHHHHHHHHHHHHhHhheeEEEeeCCEEEEE
Confidence 4688887543 112 23356666666543 3899999999999999999877433 211 11
Q ss_pred EeCCCCceEEEEEEcCchhhhhCCCCCccccccccccccCCCCCCCeEEEEEEEEcCCeEEEEeeeceeeechhhHHHHH
Q 035869 90 NCNDEGVEFIEAKVDGQLSRILNGEFETDLLNKFLPNGYAESATSPLLATQINMFNCGGLAIGICMSHRIADGFAFSTFI 169 (429)
Q Consensus 90 ~~~~~gv~f~~a~~~~~l~~l~~~~p~~~~~~~l~p~~~~~~~~~Pll~vQvt~~~cgGl~l~~~~~H~v~Dg~~~~~fl 169 (429)
......+.+.+.+ .+-+++.. .....-. .-+....|++++.+-....+...|.+.+||.++||.|+..|+
T Consensus 165 v~~~~~~~~~~~~--~~~~~~~~-------~~~~~~~-~fdl~~~pl~r~~l~~~~~~~~~l~~~~HH~i~Dg~S~~~l~ 234 (520)
T 2jgp_A 165 IHEDVPFALAYSE--VTEEEARE-------LVSSLVQ-PFDLEVAPLIRVSLLKIGEDRYVLFTDMHHSISDGVSSGILL 234 (520)
T ss_dssp ECSCCCCCCEEEE--CCHHHHHH-------HHHHTCC-CCCTTSSCCEEEEEEEEETTEEEEEEEEBGGGCCHHHHHHHH
T ss_pred ECCCCCCceEEEe--CCHHHHHH-------HHHHhcC-CCCCCCCcceeEEEEEEcCCcEEEEEEccceeecHhHHHHHH
Confidence 1111112221111 11111110 0000000 112334688888887776577999999999999999999999
Q ss_pred HHHHHHhhCCCCCCCCC-cc-c-----ccccCCCC------------CCC-CCccccc---CCCCCCCCeEEEEEEEcHH
Q 035869 170 NAWAKSCRLGLNEVSSP-SF-E-----LGIFFPAV------------RDL-PNIEAAA---APLKSGLKIVTKRFLFDGK 226 (429)
Q Consensus 170 ~~wa~~~r~G~~~~~~P-~~-~-----r~~l~~~~------------~~~-p~~~~~~---~~~~~~~~~~~~~~~~~~~ 226 (429)
+.+.+.++ |......| .+ + +....... .+. |....|. .+...........+.++.+
T Consensus 235 ~el~~~Y~-~~~l~~~~~~~~d~~~~~~~~~~~~~~~~~~~yW~~~l~~~~~~~~lp~~~~~~~~~~~~~~~~~~~l~~~ 313 (520)
T 2jgp_A 235 AEWVQLYQ-GDVLPELRIQYKDFAVWQQEFSQSAAFHKQEAYWLQTFADDIPVLNLPTDFTRPSTQSFAGDQCTIGAGKA 313 (520)
T ss_dssp HHHHHHHT-TCCCCCCSCCHHHHHHHHHHHTTSHHHHHHHHHHHHHTSSCCCCCCCCCSSCCCSSCCCBEEEEEEECCHH
T ss_pred HHHHHHHc-cCCCCCCCCCHHHHHHHHHHhhcChhhHHHHHHHHHHhCCCCCcCCCCCCCCCCCCCCCCccEEEEeCCHH
Confidence 99999999 76422112 11 1 10000000 011 1111110 1111223456678899999
Q ss_pred HHHHHHHHccCCCCCchhhHHHHHHHHHHHHhhhccCCCcceEEEEEeecCCCCCCCCCCCccccccccccccccccccc
Q 035869 227 AITKLKAEVDDRQVTRVQMVIALIWKAHISALRAKRGHLRDFLLMLPMNLRGKTVPRVSENCYGNLYKFTNPRFNADESN 306 (429)
Q Consensus 227 ~l~~Lk~~~~~~~~St~d~l~A~lW~~~~~Ar~~~~~~~~~~~l~~~vd~R~rl~pplp~~Y~GN~~~~~~~~~~~~~~~ 306 (429)
..++|++.|....+|.+.++.|.+-..+.+- . + .+...+.+++++|.. + --.+-+|+++......+... .+
T Consensus 314 ~~~~l~~~a~~~~~T~~~~l~aa~a~~L~~~--~--~-~~dv~~g~~~~gR~~--~-~~~~~vG~f~n~lplr~~~~-~~ 384 (520)
T 2jgp_A 314 LTEGLHQLAQATGTTLYMVLLAAYNVLLAKY--A--G-QEDIIVGTPITGRSH--A-DLEPIVGMFVNTLAMRNKPQ-RE 384 (520)
T ss_dssp HHHHHHHHHHHHTCCHHHHHHHHHHHHHHHH--H--T-CSCEEEEEEECCCCS--G-GGTTCCSCCCEEEEEEECCC-TT
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHh--c--C-CCCeEEEeccCCCCc--h-hhhccEEeeeeeeeEEecCC-CC
Confidence 9999998887567899999988754444433 2 1 256789999999975 2 12456677766555555444 35
Q ss_pred ccHHHHHHHHHHHhhc
Q 035869 307 MELHNFVDLIGNAFRN 322 (429)
Q Consensus 307 ~~l~~~A~~iR~ai~~ 322 (429)
.++.+++..+++.+.+
T Consensus 385 ~~~~~~l~~v~~~~~~ 400 (520)
T 2jgp_A 385 KTFSEFLQEVKQNALD 400 (520)
T ss_dssp SBHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHH
Confidence 6788888888888765
No 8
>4hvm_A Tlmii; PSI-biology, midwest center for structural genomics, MCSG, N product biosynthesis, natPro; 2.70A {Streptoalloteichus hindustanus}
Probab=98.46 E-value=4.5e-06 Score=84.76 Aligned_cols=245 Identities=11% Similarity=0.067 Sum_probs=140.5
Q ss_pred HHHHHHHHHHHHhhhccCCCCcccC--CCcEEEeCCCCceEEEEEEcCchhhhhCCCCCc-cccccccccc---cCCCCC
Q 035869 60 TINLLQKSLSEILTLYYPLAGRYDS--ENALVNCNDEGVEFIEAKVDGQLSRILNGEFET-DLLNKFLPNG---YAESAT 133 (429)
Q Consensus 60 ~~~~L~~sL~~~L~~~p~LaGrvv~--~~~~i~~~~~gv~f~~a~~~~~l~~l~~~~p~~-~~~~~l~p~~---~~~~~~ 133 (429)
..++|++++.+++..+|.|--+++. |.+. ......+.+.+.+. .. .++. ..+..++-.. .-+...
T Consensus 48 d~~~L~~A~~~lv~rh~~LRt~f~~~~~~~~-~v~~~~~~~~~~d~-------~~-~~~~~~~~~~~~~~~~~~~fdl~~ 118 (493)
T 4hvm_A 48 DDDRLAAAADEVLDAFPLLRVNFVDDDGLWM-RTRENADALVRSDL-------RG-HPDPQARCVELLRADRDRPTDPER 118 (493)
T ss_dssp CHHHHHHHHHHHHHHCGGGGEEEEESSSEEE-EECSCCCCEEEEEC-------TT-SSSHHHHHHHHHHHHHSSCCCTTT
T ss_pred CHHHHHHHHHHHHHhchhceeEEEccCCEEE-EecCCCCCceEEEC-------CC-CCchHHHHHHHHHHHhcCCCCCCC
Confidence 4899999999999999999888443 2222 22222233332221 11 0010 1111111000 113335
Q ss_pred CCeEEEEEEEEcCCeEEEEeeeceeeechhhHHHHHHHHHHHhhCCCCCCCCCccc-----cc--ccCCCCC--------
Q 035869 134 SPLLATQINMFNCGGLAIGICMSHRIADGFAFSTFINAWAKSCRLGLNEVSSPSFE-----LG--IFFPAVR-------- 198 (429)
Q Consensus 134 ~Pll~vQvt~~~cgGl~l~~~~~H~v~Dg~~~~~fl~~wa~~~r~G~~~~~~P~~~-----r~--~l~~~~~-------- 198 (429)
.|++++.+.....+...|.+.+||.++||.|+..|++.+.+.+. |.... .+..+ +. .+.....
T Consensus 119 ~pl~r~~l~~~~~~~~~l~l~~HH~i~Dg~S~~~l~~~l~~~Y~-g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~W~ 196 (493)
T 4hvm_A 119 DPLVRLHLVRLSETDVVLGVVAHQMLLDARSRYMVLGAVWQAYY-GRFRP-AQYRDFAEVADFHPLDRETVRVARHRWWS 196 (493)
T ss_dssp SCSEEEEEEECSSSEEEEEEEEETTTCCHHHHHHHHHHHHHHHT-TCCCG-GGSBCGGGTTTCCTTCSHHHHHHHHHHHH
T ss_pred CCeEEEEEEEECCCcEEEEEecchhhccHHHHHHHHHHHHHHhC-CCCCC-cCHHHHHHHHhhhhcccChhhHHHHHHHH
Confidence 68888888777756789999999999999999999999999998 87632 11111 11 0000000
Q ss_pred ----CCCCcccccCCCCCCCCeEEEEEEEcHHHHHHHHHHccCCCCC--chhhHHHHHHHHHHHHhhhc-------cCCC
Q 035869 199 ----DLPNIEAAAAPLKSGLKIVTKRFLFDGKAITKLKAEVDDRQVT--RVQMVIALIWKAHISALRAK-------RGHL 265 (429)
Q Consensus 199 ----~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Lk~~~~~~~~S--t~d~l~A~lW~~~~~Ar~~~-------~~~~ 265 (429)
+.|.. +..+.. ........+.++.+..++|++.|....+| .+.++.|.+-..+.+-+... .+ .
T Consensus 197 ~~l~~~~~l--~~~~~~-~~~~~~~~~~l~~~~~~~l~~~a~~~~vt~~~~~~l~aa~a~~L~~~~~~~~~~~~~~~g-~ 272 (493)
T 4hvm_A 197 RRLPALPVR--GGDGGP-VGPPETSRLRVPGSRWQALTEPGGPLGGNGSLAMAALTAWWLWTQGAGTGTDTGAGTGTG-K 272 (493)
T ss_dssp HHGGGSCCC--C--------CCEEEEEEEEHHHHHHHHCC------CHHHHHHHHHHHHHHHC-----------------
T ss_pred HhccCCCCC--CCCCCC-CCCCeeEEEEcCHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHhhhcccccccCcCC-C
Confidence 01110 000111 11256778899999999999888867789 99999887644444331100 11 2
Q ss_pred cceEEEEEeecCCCCCCCCCCCccccccccccccccccc-ccccHHHHHHHHHHHhhc
Q 035869 266 RDFLLMLPMNLRGKTVPRVSENCYGNLYKFTNPRFNADE-SNMELHNFVDLIGNAFRN 322 (429)
Q Consensus 266 ~~~~l~~~vd~R~rl~pplp~~Y~GN~~~~~~~~~~~~~-~~~~l~~~A~~iR~ai~~ 322 (429)
....+.+++++|.. | --.+.+|+++......+.... .+.++.+++..+++.+.+
T Consensus 273 ~dv~~g~~~~gR~~--~-~~~~~vG~f~n~lplr~~~~~~~~~t~~~~l~~v~~~~~~ 327 (493)
T 4hvm_A 273 DSLYLSTEVDLRDH--L-QLGSVVGPLTDRVVFGVDLTGLREPSFRDLMSRTQAGFLD 327 (493)
T ss_dssp CEEEEEEEEEHHHH--T-TCCSBCSCCEEEEEEEEECTTCSSCBHHHHHHHHHHHHHH
T ss_pred CCEEEEeeccCCCC--c-chhcCeEeeeceeEEEEecCCCcCCCHHHHHHHHHHHHHH
Confidence 56889999999965 2 234667777666555554432 156788888888887766
No 9
>1l5a_A Amide synthase, VIBH; nonribosomal peptide synthetase, NRPS condensation domain, vibriobactin, biosynthetic protein; 2.55A {Vibrio cholerae} SCOP: c.43.1.2 c.43.1.2
Probab=98.42 E-value=3.1e-06 Score=84.33 Aligned_cols=255 Identities=14% Similarity=0.112 Sum_probs=149.1
Q ss_pred CccEEEEecCCCCCCCCCCchHHHHHHHHHHHHHhhhccCCCCcccC-CCcEEEeCCCCceEEEEEEcCchhhhhCCCCC
Q 035869 38 YMPFIFYYPANDNNNNKPQNIVTINLLQKSLSEILTLYYPLAGRYDS-ENALVNCNDEGVEFIEAKVDGQLSRILNGEFE 116 (429)
Q Consensus 38 y~~~~~~f~~~~~~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGrvv~-~~~~i~~~~~gv~f~~a~~~~~l~~l~~~~p~ 116 (429)
.+..++-++... ..++|++++.+++..+|.|--++.. ++ .+ .....+.+.+. ++.. .++
T Consensus 22 ~~~~~~~l~g~l----------d~~~L~~A~~~lv~rh~~LRt~f~~~~~-~v-~~~~~~~~~~~-------d~~~-~~~ 81 (436)
T 1l5a_A 22 TVAHSLRLTGPL----------DTTLLLRALHLTVSEIDLFRARFSAQGE-LY-WHPFSPPIDYQ-------DLSI-HLE 81 (436)
T ss_dssp EEEEEEEEESSC----------CHHHHHHHHHHHHHTCGGGGEEECTTCC-EE-ECSSCCCCEEE-------ECTT-CTT
T ss_pred ceeEEEEEeCCC----------CHHHHHHHHHHHHHHhheeEEEEEecCC-eE-CCCcCCCccEE-------eCCC-CCC
Confidence 345555555543 3899999999999999999888443 22 22 11111222111 1111 111
Q ss_pred c-ccccccccc---ccCCCCCCCeEEEEEEEEcCCeEEEEeeeceeeechhhHHHHHHHHHHHhhC---CCCCCCC-Ccc
Q 035869 117 T-DLLNKFLPN---GYAESATSPLLATQINMFNCGGLAIGICMSHRIADGFAFSTFINAWAKSCRL---GLNEVSS-PSF 188 (429)
Q Consensus 117 ~-~~~~~l~p~---~~~~~~~~Pll~vQvt~~~cgGl~l~~~~~H~v~Dg~~~~~fl~~wa~~~r~---G~~~~~~-P~~ 188 (429)
. ..+..++-. ..-+....|++++.+-....+...|.+.+||.++||.|+..|++.+.+.++. |...... +.+
T Consensus 82 ~~~~~~~~~~~~~~~~fdl~~~pl~r~~l~~~~~~~~~l~~~~HH~i~Dg~S~~~l~~~l~~~Y~~~~~g~~~~~~~~~~ 161 (436)
T 1l5a_A 82 AEPLAWRQIEQDLQRSSTLIDAPITSHQVYRLSHSEHLIYTRAHHIVLDGYGMMLFEQRLSQHYQSLLSGQTPTAAFKPY 161 (436)
T ss_dssp HHHHHHHHHHHHHTSCCCCBTSCSCEEEEEEEETTEEEEEEEEETTTCCHHHHHHHHHHHHHHHHHHHHTCCCCCCCCCH
T ss_pred HHHHHHHHHHHHhcCCCCcCCCCCeEEEEEEEcCCEEEEEEeehhheecHhHHHHHHHHHHHHHHHHhcCCCCCCCccCH
Confidence 0 011111100 0112334688888887776578999999999999999999999999998871 3332111 111
Q ss_pred c------ccccCCCCC------------CCCC-cccccCCCCCCCCeEEEEEEEcHHHHHHHHHHccCCCCCchhhHHHH
Q 035869 189 E------LGIFFPAVR------------DLPN-IEAAAAPLKSGLKIVTKRFLFDGKAITKLKAEVDDRQVTRVQMVIAL 249 (429)
Q Consensus 189 ~------r~~l~~~~~------------~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~Lk~~~~~~~~St~d~l~A~ 249 (429)
. +..+..... +.|. ...|..............+.++.+..++|++.|....+|.+.++.|.
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~W~~~l~~~~~~~~lp~~~~~~~~~~~~~~~~l~~~~~~~l~~~a~~~~~t~~~~l~aa 241 (436)
T 1l5a_A 162 QSYLEEEAAYLTSHRYWQDKQFWQGYLREAPDLTLTSATYDPQLSHAVSLSYTLNSQLNHLLLKLANANQIGWPDALVAL 241 (436)
T ss_dssp HHHHHHHHHHHTSHHHHHHHHHHHHHHHTSCCCCBCCTTCCGGGCCEEEEEEECCHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred HHHHHHHHHhhccHhHHHHHHHHHHHhcCCCCcccCCCCCCCCcccceeeEEecCHHHHHHHHHHHHHhCCCHHHHHHHH
Confidence 0 000000000 1111 11111111122334577889999999999988876779999999887
Q ss_pred HHHHHHHHhhhccCCCcceEEEEEeecCCCCCCCCCCCcccccccccccccccccccccHHHHHHHHHHHhhc
Q 035869 250 IWKAHISALRAKRGHLRDFLLMLPMNLRGKTVPRVSENCYGNLYKFTNPRFNADESNMELHNFVDLIGNAFRN 322 (429)
Q Consensus 250 lW~~~~~Ar~~~~~~~~~~~l~~~vd~R~rl~pplp~~Y~GN~~~~~~~~~~~~~~~~~l~~~A~~iR~ai~~ 322 (429)
+-..+.+- . + ....+.+++++|.. + --.+-+|+++......+... .+.++.+++..+++.+.+
T Consensus 242 ~~~~L~~~--~--g--~dv~ig~~~~~R~~--~-~~~~~vG~f~n~lplr~~~~-~~~t~~~~l~~v~~~~~~ 304 (436)
T 1l5a_A 242 CALYLESA--E--P--DAPWLWLPFMNRWG--S-VAANVPGLMVNSLPLLRLSA-QQTSLGNYLKQSGQAIRS 304 (436)
T ss_dssp HHHHHHHH--S--T--TCCEEEEEECCCTT--S-GGGGSCSCCCEEEEEECCCC-TTCBHHHHHHHHHHHHHH
T ss_pred HHHHHHHh--h--C--CceEEeeecccCCC--h-HHhcCcceEEEEEEEEEecC-CCCCHHHHHHHHHHHHHH
Confidence 64444433 1 2 34779999999975 2 22456677665554444443 356788888888888866
No 10
>2xhg_A Tyrocidine synthetase A; isomerase, nonribosomal peptide synthesis, cofactor-independ epimerization; 1.50A {Brevibacillus brevis}
Probab=98.25 E-value=0.00016 Score=72.51 Aligned_cols=250 Identities=12% Similarity=0.123 Sum_probs=144.7
Q ss_pred HHHHHHHHHHHHhhhccCCCCcccC--CCc-EEEeC--CCCceEEEEEEc--CchhhhhCCCCCccccccc-cccccCCC
Q 035869 60 TINLLQKSLSEILTLYYPLAGRYDS--ENA-LVNCN--DEGVEFIEAKVD--GQLSRILNGEFETDLLNKF-LPNGYAES 131 (429)
Q Consensus 60 ~~~~L~~sL~~~L~~~p~LaGrvv~--~~~-~i~~~--~~gv~f~~a~~~--~~l~~l~~~~p~~~~~~~l-~p~~~~~~ 131 (429)
..++|+++|.+++..++.|--++.. |.+ ++... ...+.+.+.+.. ...++... ...+.+ -| -+.
T Consensus 51 d~~~L~~Al~~lv~rh~~LRt~f~~~~~~~~q~v~~~~~~~~~~~~~d~~~~~~~~~~~~-----~~~~~~~~~---fdl 122 (466)
T 2xhg_A 51 DPKVIQSVMDKIIEHHDALRMVYQHENGNVVQHNRGLGGQLYDFFSYNLTAQPDVQQAIE-----AETQRLHSS---MNL 122 (466)
T ss_dssp CHHHHHHHHHHHHHHSGGGGEEEECGGGCCEEEECCSSSCCCEEEEEECTTCSCHHHHHH-----HHHHHHHTT---CCT
T ss_pred CHHHHHHHHHHHHHhChHhheEEecCCCceeeeccccccccceeEEEecCCcccHHHHHH-----HHHHHHHhc---cCC
Confidence 4899999999999999999888443 222 22221 122233222211 01111000 000000 01 133
Q ss_pred CCCCeEEEEEEEEcCCeEEEEeeeceeeechhhHHHHHHHHHHHhhC---CCCCCCC--Cc-c-c-----ccccCCCC--
Q 035869 132 ATSPLLATQINMFNCGGLAIGICMSHRIADGFAFSTFINAWAKSCRL---GLNEVSS--PS-F-E-----LGIFFPAV-- 197 (429)
Q Consensus 132 ~~~Pll~vQvt~~~cgGl~l~~~~~H~v~Dg~~~~~fl~~wa~~~r~---G~~~~~~--P~-~-~-----r~~l~~~~-- 197 (429)
...|++++.+-... ++-.|-+.+||.++||.|+..|++.+.+.++. |.+.... +. + + +..+....
T Consensus 123 ~~~pl~r~~l~~~~-~~~~l~l~~HH~i~Dg~S~~~l~~el~~~Y~~~~~g~~~~l~~~~~~y~~~~~~~~~~~~~~~~~ 201 (466)
T 2xhg_A 123 QEGPLVKVALFQTL-HGDHLFLAIHHLVVDGISWRILFEDLATGYAQALAGQAISLPEKTDSFQSWSQWLQEYANEADLL 201 (466)
T ss_dssp TTCCCEEEEEEEET-TEEEEEEEEEGGGCCHHHHHHHHHHHHHHHHHHHTTCCCCCCCCCSCHHHHHHHHHHHTTSHHHH
T ss_pred CCCCeEEEEEEEcC-CCCEEEEEeeeeeechhhHHHHHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHHHHhcCccch
Confidence 45689988888877 55557799999999999999999999998761 4332111 11 1 0 00000000
Q ss_pred C----------CCCCccccc---CCCCCCCCeEEEEEEEcHHHHHHHHHHcc-CCCCCchhhHHHHHHHHHHHHhhhccC
Q 035869 198 R----------DLPNIEAAA---APLKSGLKIVTKRFLFDGKAITKLKAEVD-DRQVTRVQMVIALIWKAHISALRAKRG 263 (429)
Q Consensus 198 ~----------~~p~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~Lk~~~~-~~~~St~d~l~A~lW~~~~~Ar~~~~~ 263 (429)
. +.|....|. .+...........+.++.+..++|++.+. ...+|.++++.|.+-..+.+-- +
T Consensus 202 ~~~~~W~~~l~~~~~~~lp~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~t~~~~llaa~~~~l~~~~----~ 277 (466)
T 2xhg_A 202 SEIPYWESLESQAKNVSLPKDYEVTDCKQKSVRNMRIRLHPEETEQLLKHANQAYQTEINDLLLAALGLAFAEWS----K 277 (466)
T ss_dssp TTHHHHHHHHHHCCCCCCCCSSCCSSCBGGGEEEEEEECCHHHHHHHHHTGGGTTTCCHHHHHHHHHHHHHHHHH----C
T ss_pred hhhHHHHHhhccCCcccCCccccccccccccceEEEEEcCHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHh----C
Confidence 0 011111110 01112234567788999999999988764 4568999999887654444432 2
Q ss_pred CCcceEEEEEeecCCCCCC-CCCCCcccccccccccccccccccccHHHHHHHHHHHhhcCC
Q 035869 264 HLRDFLLMLPMNLRGKTVP-RVSENCYGNLYKFTNPRFNADESNMELHNFVDLIGNAFRNPS 324 (429)
Q Consensus 264 ~~~~~~l~~~vd~R~rl~p-plp~~Y~GN~~~~~~~~~~~~~~~~~l~~~A~~iR~ai~~~~ 324 (429)
.....+.+++++|....+ +--.+-+|+++......+... .+.++.+++..|++.+..+.
T Consensus 278 -~~dv~ig~~~~gR~~~~~~~~~~~~vG~f~n~lplr~~~~-~~~~~~~~l~~v~~~~~~~~ 337 (466)
T 2xhg_A 278 -LAQIVIHLEGHGREDIIEQANVARTVGWFTSQYPVLLDLK-QTAPLSDYIKLTKENMRKIP 337 (466)
T ss_dssp -CSEEEEEEEECCCCSCSTTCCCTTCCSCCCEEEEEEEECS-CCCSHHHHHHHHHHHHHHSG
T ss_pred -CCceEEEecCCCCCccccCCCccccccceeeeccEEEecC-CCCCHHHHHHHHHHHHHhCc
Confidence 256789999999976421 122456677665554444443 35678999999999988763
No 11
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis}
Probab=98.16 E-value=0.00017 Score=82.06 Aligned_cols=264 Identities=10% Similarity=0.040 Sum_probs=153.4
Q ss_pred CccEEEEecCCCCCCCCCCchHHHHHHHHHHHHHhhhccCCCCcccC--C--CcEEEeCCCCceEEEEEEcCchhhhhCC
Q 035869 38 YMPFIFYYPANDNNNNKPQNIVTINLLQKSLSEILTLYYPLAGRYDS--E--NALVNCNDEGVEFIEAKVDGQLSRILNG 113 (429)
Q Consensus 38 y~~~~~~f~~~~~~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGrvv~--~--~~~i~~~~~gv~f~~a~~~~~l~~l~~~ 113 (429)
.+..++-++... ..++|++++.+++..++.|--++.. + ..++......+.+.+.+ +..
T Consensus 36 ~~~~~~~l~g~l----------d~~~l~~A~~~lv~rH~~LRt~f~~~~~~~p~Q~v~~~~~~~~~~~d-------~~~- 97 (1304)
T 2vsq_A 36 LEQITMKVKGSL----------NIKCLEESMNVIMDRYDVFRTVFIHEKVKRPVQVVLKKRQFHIEEID-------LTH- 97 (1304)
T ss_dssp EEEEEEEEEECC----------CHHHHHHHHHHHHHHCGGGGEEEECSSCSSCEEEEESCCCCCEEEEE-------CTT-
T ss_pred EEEEEEEEcCCc----------CHHHHHHHHHHHHHhhhhceEEEEEcCCCeEEEEECCCCCCceEEEE-------CCC-
Confidence 345555555443 3899999999999999999877443 1 12332222222222211 111
Q ss_pred CCCc---cccccccccc---cCCCCCCCeEEEEEEEEcCCeEEEEeeeceeeechhhHHHHHHHHHHHhhC---CCCCCC
Q 035869 114 EFET---DLLNKFLPNG---YAESATSPLLATQINMFNCGGLAIGICMSHRIADGFAFSTFINAWAKSCRL---GLNEVS 184 (429)
Q Consensus 114 ~p~~---~~~~~l~p~~---~~~~~~~Pll~vQvt~~~cgGl~l~~~~~H~v~Dg~~~~~fl~~wa~~~r~---G~~~~~ 184 (429)
.+.. ..++.++-.. .-+....|++++.+-....+...|-+.+||.++||.|+..|++.+.+.++. |.+...
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~fdl~~~pl~r~~l~~~~~~~~~l~~~~HHii~DG~S~~~l~~el~~~Y~~~~~g~~~~l 177 (1304)
T 2vsq_A 98 LTGSEQTAKINEYKEQDKIRGFDLTRDIPMRAAIFKKAEESFEWVWSYHHIILDGWCFGIVVQDLFKVYNALREQKPYSL 177 (1304)
T ss_dssp SCHHHHHHHHHHHHHHHHHHCCCTTTSCSEEEEEEEEETTEEEEEEEEEGGGCCHHHHHHHHHHHHHHHHHHHTTCCCCC
T ss_pred CCchhHHHHHHHHHHHHhcCCCCCCCCCcEEEEEEEECCCcEEEEEecCceeechhhHHHHHHHHHHHHHHhhcCCCCCC
Confidence 1100 0111111000 123445689999888887678999999999999999999999999998861 333211
Q ss_pred C--Ccc-cccc-cCCCC------------CCCCC-ccccc--CCCCCCCCeEEEEEEEcHHHHHHHHHHccCCCCCchhh
Q 035869 185 S--PSF-ELGI-FFPAV------------RDLPN-IEAAA--APLKSGLKIVTKRFLFDGKAITKLKAEVDDRQVTRVQM 245 (429)
Q Consensus 185 ~--P~~-~r~~-l~~~~------------~~~p~-~~~~~--~~~~~~~~~~~~~~~~~~~~l~~Lk~~~~~~~~St~d~ 245 (429)
. +.+ |-.. +.... .++|. ...|. .+...........+.++.+..++|++.|+...+|.+.+
T Consensus 178 ~~~~~y~d~~~~~~~~~~~~~~~yW~~~L~~~~~~~~lp~~~~~~~~~~~~~~~~~~l~~~~~~~L~~~a~~~~~T~~~v 257 (1304)
T 2vsq_A 178 PPVKPYKDYIKWLEKQDKQASLRYWREYLEGFEGQTTFAEQRKKQKDGYEPKELLFSPSEAETKAFTELAKSQHTTLSTA 257 (1304)
T ss_dssp CCCCCTHHHHHHHHTSCHHHHHHHHHHHHTTCCCCCTTTTTCCCSSCCCCEEEEEECCCHHHHHHHHHHHHHTTCCHHHH
T ss_pred CCcccHHHHHHHHhcchhhHHHHHHHHHhCCCCccccCCCCCCccccccCcceEEEecCHHHHHHHHHHHHHcCCCHHHH
Confidence 1 111 1000 00000 01111 00110 11112234556778899999999999888677999999
Q ss_pred HHHHHHHHHHHHhhhccCCCcceEEEEEeecCCCCCCCCCCCcccccccccccccccccccccHHHHHHHHHHHhhc-CC
Q 035869 246 VIALIWKAHISALRAKRGHLRDFLLMLPMNLRGKTVPRVSENCYGNLYKFTNPRFNADESNMELHNFVDLIGNAFRN-PS 324 (429)
Q Consensus 246 l~A~lW~~~~~Ar~~~~~~~~~~~l~~~vd~R~rl~pplp~~Y~GN~~~~~~~~~~~~~~~~~l~~~A~~iR~ai~~-~~ 324 (429)
|.|.+-..+.+ .. + .+...+..++++|..-.+.+ .+-+|+++.....++..+ .+.++.++...+++...+ ..
T Consensus 258 llaa~a~~L~r--~t--g-~~dvv~G~pvsgR~~~~~~~-~~~vG~fvntlplr~~~~-~~~s~~~ll~~v~~~~~~a~~ 330 (1304)
T 2vsq_A 258 LQAVWSVLISR--YQ--Q-SGDLAFGTVVSGRPAEIKGV-EHMVGLFINVVPRRVKLS-EGITFNGLLKRLQEQSLQSEP 330 (1304)
T ss_dssp HHHHHHHHHHH--HH--T-CSEEEEEEEECCCCTTSTTG-GGCCSSCCEEEEEEEECC-TTCBHHHHHHHHHHHHHHHGG
T ss_pred HHHHHHHHHHH--hc--C-CCCEEEEEEeCCCCccchhh-hcccccceeEEEEEecCC-CCCcHHHHHHHHHHHHHHhhh
Confidence 98865333333 22 2 25688999999997532211 355666665544444443 356788899999988765 44
Q ss_pred cc
Q 035869 325 LD 326 (429)
Q Consensus 325 ~~ 326 (429)
.+
T Consensus 331 hq 332 (1304)
T 2vsq_A 331 HQ 332 (1304)
T ss_dssp GT
T ss_pred cc
Confidence 44
No 12
>3fot_A 15-O-acetyltransferase; fusarium head blight, trichothecene mycotoxin, deoxynivaleno toxin, fusarium graminearum, coenzyme A; 1.75A {Fusarium sporotrichioides} PDB: 3fp0_A*
Probab=97.63 E-value=0.0039 Score=63.45 Aligned_cols=260 Identities=11% Similarity=0.040 Sum_probs=140.2
Q ss_pred chHHHHHHHHHHHHHhhhccCCCCcccCC---CcEEEeC---C-C------CceEEEEEEcCchhhhh----------CC
Q 035869 57 NIVTINLLQKSLSEILTLYYPLAGRYDSE---NALVNCN---D-E------GVEFIEAKVDGQLSRIL----------NG 113 (429)
Q Consensus 57 ~~~~~~~L~~sL~~~L~~~p~LaGrvv~~---~~~i~~~---~-~------gv~f~~a~~~~~l~~l~----------~~ 113 (429)
..+..++||+|+-.+--.+|-+|++|..+ .....|. + + .-.|.+...+.+-+|+. ..
T Consensus 71 ~~~l~~~lr~AW~~lR~~hP~iA~~v~~d~~~~~~~~Y~~~~~~~~~~~Wl~~Tf~v~~~~~t~~e~~~~~~~~r~~~~~ 150 (519)
T 3fot_A 71 LQNLKEMFELALLDARFEHPECACTVSWDDEVPAIITYESPESNESARDWARGCIHVQPTAKSALDLWSEMEEGRAAAND 150 (519)
T ss_dssp HHHHHHHHHHHHHHHHHHCGGGGCEEECCSSSSCEEEEECCSSHHHHHHHHHHHEEEEECSCCHHHHHHHHHHHHHHTC-
T ss_pred HHHHHHHHHHHHHHHHhhCCcceeEEeeCCCCcccEEEecCCCHHHHHHHHHhcEEEeCCCCCHHHHHHhhhhhhccccc
Confidence 46788999999999999999999995432 2222221 1 0 01233333333333331 00
Q ss_pred CCCccccccc---cccccCCCCCCCeEEEEEEEEcCC--eEEEEeeeceeeechhhHHHHHHHHHHHhhC--CCCC-CCC
Q 035869 114 EFETDLLNKF---LPNGYAESATSPLLATQINMFNCG--GLAIGICMSHRIADGFAFSTFINAWAKSCRL--GLNE-VSS 185 (429)
Q Consensus 114 ~p~~~~~~~l---~p~~~~~~~~~Pll~vQvt~~~cg--Gl~l~~~~~H~v~Dg~~~~~fl~~wa~~~r~--G~~~-~~~ 185 (429)
.+.. ..-.| .|.. ..+.| +. + -.-|.+.+||.++||.|...|++.+=+.... +... ...
T Consensus 151 ~~p~-~~~~l~~v~~~~---~~~~~--------~p-~~~~~~lv~~~~H~~~DG~g~~~f~~~ll~~L~~~~~~~~~~~~ 217 (519)
T 3fot_A 151 NTPS-KSIELFLLSDVS---TDSTP--------IP-QDATVEILFHSNHLFWDGIGCRKFVGDLFRLVGSYIGRSDSREM 217 (519)
T ss_dssp CCCC-CSCEEEEEESSS---STTSC--------CC-TTCEEEEEEEECGGGCCHHHHHHHHHHHHHHHTTSTTC-CGGGS
T ss_pred CCCc-cceEEEEEeccc---ccccc--------CC-CCceEEEEEEeCceeEchHhHHHHHHHHHHHHHhhhccCCccCC
Confidence 1110 00000 0110 01111 22 3 4667788999999999999999988766551 1111 112
Q ss_pred Cccc----ccccCCCCC---CCCCc------c-------------ccc-C-CC-CCCCCeEEEEEEEcHHHHHHHHHHcc
Q 035869 186 PSFE----LGIFFPAVR---DLPNI------E-------------AAA-A-PL-KSGLKIVTKRFLFDGKAITKLKAEVD 236 (429)
Q Consensus 186 P~~~----r~~l~~~~~---~~p~~------~-------------~~~-~-~~-~~~~~~~~~~~~~~~~~l~~Lk~~~~ 236 (429)
|.++ -..|.|+-. .+|.- . .+. . +. .....-....+.|+.++.++|++.|+
T Consensus 218 ~~~~~g~E~~~L~P~~e~~~~~p~~~~~~e~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~ls~~~t~~L~~~ck 297 (519)
T 3fot_A 218 KKIQWGQEIKNLSPPVVDSLKLDINTLGSEFDDKCTEYTSALVANYKSRGMKFQPGLALPRCVIHKLSADESIDIVKAVK 297 (519)
T ss_dssp CCCCTTTTGGGSCCCTGGGBSSCGGGCCHHHHHHHHHHHHHHHHHHHSCCSBCCCCCCCEEEEEEECCHHHHHHHHHHHH
T ss_pred CcCCCCcccccCCcCHHHHhCCCCCCCCHHHHHHHHHHHHHhhcCCCcccCCCCCCCCCcceEEEEcCHHHHHHHHHHHH
Confidence 3332 112333210 12210 0 000 0 11 11233445788899999999999998
Q ss_pred C---CCCCchhhHHHHHHHHHHHHhhh-ccCCCcceEEEEEeecCCCCCCCCCCCccccccccccccccc-cc------c
Q 035869 237 D---RQVTRVQMVIALIWKAHISALRA-KRGHLRDFLLMLPMNLRGKTVPRVSENCYGNLYKFTNPRFNA-DE------S 305 (429)
Q Consensus 237 ~---~~~St~d~l~A~lW~~~~~Ar~~-~~~~~~~~~l~~~vd~R~rl~pplp~~Y~GN~~~~~~~~~~~-~~------~ 305 (429)
. +.+|-+.+|.|.+-.++.+.... ...........++||+|+++.++.-.+|||.+.......++. .. .
T Consensus 298 ~~~~~g~Tvt~~l~Aa~~~al~~~~~~~~~~~~~~~~~~~pvnlR~~l~~~~~~n~~~~~~~~~~~~v~~i~~~~~~~~~ 377 (519)
T 3fot_A 298 TRLGPGFTISHLTQAAIVLALLDHLKPNDLSDDEVFISPTSVDGRRWLREDIASNFYAMCQTAAVVRIENLKSITVSHKD 377 (519)
T ss_dssp HHTCTTCCHHHHHHHHHHHHHHHHC----CCTTCCEEEEEEEECGGGBCHHHHTSCCSCCEEEEEEEECCGGGGCCCTTS
T ss_pred hcCCCCeeHHHHHHHHHHHHHHhhcCCcccCCCccEEEEeeeeccccCCCcccccccceeeeeeeeEecCccccccccch
Confidence 4 48999999988776555543211 011124578999999999997655557888877654443321 10 0
Q ss_pred cc-----cHHHHHHHHHHHhhc-CCccccc
Q 035869 306 NM-----ELHNFVDLIGNAFRN-PSLDSAK 329 (429)
Q Consensus 306 ~~-----~l~~~A~~iR~ai~~-~~~~~~~ 329 (429)
+. .+.+++..+++.... .++.+++
T Consensus 378 ~e~~~~~~~~~~ar~l~~~y~~~~~np~i~ 407 (519)
T 3fot_A 378 EKELQVRALESACRNIKKSYRQWLENPFLQ 407 (519)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHTCTTHH
T ss_pred hhhhhHhHHHHHHHHHHHHhhcccCCchHH
Confidence 01 146667777776655 3444444
No 13
>3cla_A Type III chloramphenicol acetyltransferase; transferase (acyltransferase); HET: CLM; 1.75A {Escherichia coli} SCOP: c.43.1.1 PDB: 1cla_A* 2cla_A 4cla_A* 1cia_A 1qca_A*
Probab=66.30 E-value=3.2 Score=36.57 Aligned_cols=44 Identities=23% Similarity=0.503 Sum_probs=32.2
Q ss_pred CCeEEEEEEEEcCCe--EEEEeeeceeeechhhHHHHHHHHHHHhh
Q 035869 134 SPLLATQINMFNCGG--LAIGICMSHRIADGFAFSTFINAWAKSCR 177 (429)
Q Consensus 134 ~Pll~vQvt~~~cgG--l~l~~~~~H~v~Dg~~~~~fl~~wa~~~r 177 (429)
.|++.+=--.-+.|. +-|++++||.+.||.-...|++.+.+...
T Consensus 164 ~PIi~~G~~~~~~~~~~m~lsls~DHRvvDG~~aa~Fl~~lk~~le 209 (213)
T 3cla_A 164 APIITMAKYQQEGDRLLLPLSVQVHHAVCDGFHVARFINRLQELCN 209 (213)
T ss_dssp SCEEEEECCEEETTEEEEEEEEEEETTTCCHHHHHHHHHHHHHHHT
T ss_pred ccEEEeeEEEEECCeEEEEEEEEEcccccChHHHHHHHHHHHHHHH
Confidence 577753211112133 67889999999999999999999998765
No 14
>2i9d_A Chloramphenicol acetyltransferase; structural genomics, PSI- protein structure initiative, midwest center for structural genomics; 2.30A {Bacteroides thetaiotaomicron}
Probab=65.10 E-value=3.5 Score=36.46 Aligned_cols=28 Identities=21% Similarity=0.367 Sum_probs=25.2
Q ss_pred EEEEeeeceeeechhhHHHHHHHHHHHh
Q 035869 149 LAIGICMSHRIADGFAFSTFINAWAKSC 176 (429)
Q Consensus 149 l~l~~~~~H~v~Dg~~~~~fl~~wa~~~ 176 (429)
+-|++++||.+.||.-...|++.+.+..
T Consensus 189 m~lsls~DHRvvDG~~aa~Fl~~lk~~l 216 (217)
T 2i9d_A 189 MPIAMTIHHGFIDGHHLSLFYKKVEDFL 216 (217)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHH
T ss_pred EEEEEEecchhhChHHHHHHHHHHHHHh
Confidence 5788999999999999999999998754
No 15
>1q23_A Chloramphenicol acetyltransferase; CAT I, trimer, fusidic acid; HET: FUA; 2.18A {Escherichia coli} SCOP: c.43.1.1 PDB: 1noc_B 1pd5_A* 3u9b_A 3u9f_A*
Probab=64.35 E-value=3.7 Score=36.36 Aligned_cols=44 Identities=18% Similarity=0.437 Sum_probs=32.5
Q ss_pred CCeEEEEEEEEcCCe--EEEEeeeceeeechhhHHHHHHHHHHHhh
Q 035869 134 SPLLATQINMFNCGG--LAIGICMSHRIADGFAFSTFINAWAKSCR 177 (429)
Q Consensus 134 ~Pll~vQvt~~~cgG--l~l~~~~~H~v~Dg~~~~~fl~~wa~~~r 177 (429)
.|++.+=--.-+.|. +-|++++||.+.||.-...|++.+.+...
T Consensus 168 ~pIi~~G~~~~~~~r~~m~lsls~DHRvvDG~~aa~Fl~~lk~~le 213 (219)
T 1q23_A 168 APVFTMGKYYTQGDKVLMPLAIQVHHAVCDGFHVGRMLNELQQYCD 213 (219)
T ss_dssp SCEEEECCCEEETTEEEEEEEEEEETTTCCHHHHHHHHHHHHHHHH
T ss_pred eEEEecccEEEECCcEEEEEEEEEEchhhChHHHHHHHHHHHHHHh
Confidence 577754222222133 67889999999999999999999988765
No 16
>3b8k_A PDCE2;, dihydrolipoyllysine-residue acetyltransferase; central beta-sheet surrounded by five alpha-helices; 8.80A {Homo sapiens}
Probab=62.45 E-value=4.6 Score=36.26 Aligned_cols=29 Identities=17% Similarity=0.422 Sum_probs=27.2
Q ss_pred EEEEeeeceeeechhhHHHHHHHHHHHhh
Q 035869 149 LAIGICMSHRIADGFAFSTFINAWAKSCR 177 (429)
Q Consensus 149 l~l~~~~~H~v~Dg~~~~~fl~~wa~~~r 177 (429)
+-|+++++|.+.||.-...|++.+.+...
T Consensus 204 m~lsls~DHRviDGa~aa~Fl~~lk~~le 232 (239)
T 3b8k_A 204 MSVTLSCDHRVVDGAVGAQWLAEFRKYLE 232 (239)
T ss_dssp EEEEECCCCCSSCHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEcceeechHHHHHHHHHHHHHHh
Confidence 78999999999999999999999998876
No 17
>1scz_A E2, dihydrolipoamide succinyltransferase; COA-dependent acyltransferase, CAT-like, alpha and beta (2 L mixed beta-sheeet of 6 strands; 2.20A {Escherichia coli} SCOP: c.43.1.1 PDB: 1e2o_A 1c4t_A
Probab=59.48 E-value=5.1 Score=35.84 Aligned_cols=29 Identities=17% Similarity=0.312 Sum_probs=27.0
Q ss_pred EEEEeeeceeeechhhHHHHHHHHHHHhh
Q 035869 149 LAIGICMSHRIADGFAFSTFINAWAKSCR 177 (429)
Q Consensus 149 l~l~~~~~H~v~Dg~~~~~fl~~wa~~~r 177 (429)
+-|+++++|.+.||.-...|++.+.+...
T Consensus 196 m~lsls~DHRviDGa~aa~Fl~~lk~~le 224 (233)
T 1scz_A 196 MYLALSYDHRLIDGRESVGFLVTIKELLE 224 (233)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEcceeechHHHHHHHHHHHHHHh
Confidence 56999999999999999999999999876
No 18
>3rqc_A Probable lipoamide acyltransferase; alpha beta fold; 4.01A {Thermoplasma acidophilum dsm 1728}
Probab=59.43 E-value=4.3 Score=36.10 Aligned_cols=29 Identities=24% Similarity=0.415 Sum_probs=26.9
Q ss_pred EEEEeeeceeeechhhHHHHHHHHHHHhh
Q 035869 149 LAIGICMSHRIADGFAFSTFINAWAKSCR 177 (429)
Q Consensus 149 l~l~~~~~H~v~Dg~~~~~fl~~wa~~~r 177 (429)
+-|+++++|.+.||.-...|++.+.+...
T Consensus 187 m~lsls~DHRviDGa~aa~Fl~~l~~~le 215 (224)
T 3rqc_A 187 MYLSLSCDHRLIDGAVATRFIVDLKKVIE 215 (224)
T ss_dssp CCEEEEEETTTSCHHHHHHHHHHHHHHHT
T ss_pred EEEEEEeccceecHHHHHHHHHHHHHHHh
Confidence 45889999999999999999999999887
No 19
>1dpb_A Dihydrolipoyl-transacetylase; dihydrolipoamide acetyltransferase; 2.50A {Azotobacter vinelandii} SCOP: c.43.1.1 PDB: 1dpd_A 1eaa_A 1eab_A* 1eac_A* 1ead_A* 1eae_A* 1eaf_A 1dpc_A
Probab=59.34 E-value=5 Score=36.14 Aligned_cols=29 Identities=17% Similarity=0.307 Sum_probs=27.0
Q ss_pred EEEEeeeceeeechhhHHHHHHHHHHHhh
Q 035869 149 LAIGICMSHRIADGFAFSTFINAWAKSCR 177 (429)
Q Consensus 149 l~l~~~~~H~v~Dg~~~~~fl~~wa~~~r 177 (429)
+-|+++++|.+.||.-...|++.+.+...
T Consensus 208 m~lsls~DHRviDGa~aa~Fl~~lk~~le 236 (243)
T 1dpb_A 208 LPLSLSYDCRVINGAAAARFTKRLGDLLA 236 (243)
T ss_dssp EEEEEEEETTTSCHHHHHHHHHHHHHHHH
T ss_pred EEEEEEECcccccHHHHHHHHHHHHHHHh
Confidence 57999999999999999999999999876
No 20
>2ii3_A Lipoamide acyltransferase component of branched-C alpha-keto acid dehydrogenase complex...; cubic core, HOMO trimer, oxidized COA-bound form; HET: CAO; 2.17A {Bos taurus} PDB: 2ihw_A* 2ii4_A* 2ii5_A*
Probab=57.91 E-value=5.5 Score=36.30 Aligned_cols=29 Identities=31% Similarity=0.557 Sum_probs=26.8
Q ss_pred EEEEeeeceeeechhhHHHHHHHHHHHhh
Q 035869 149 LAIGICMSHRIADGFAFSTFINAWAKSCR 177 (429)
Q Consensus 149 l~l~~~~~H~v~Dg~~~~~fl~~wa~~~r 177 (429)
+-|+++++|.+.||.-...|++.+.+...
T Consensus 224 m~lsls~DHRviDGa~aa~Fl~~lk~~Le 252 (262)
T 2ii3_A 224 MNVSWSADHRIIDGATVSRFSNLWKSYLE 252 (262)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHH
T ss_pred eEEEEEECcceecHHHHHHHHHHHHHHHh
Confidence 56899999999999999999999998876
No 21
>3mae_A 2-oxoisovalerate dehydrogenase E2 component, dihydrolipamide acetyltransferase; 2-oxoacid dehydrogenases acyltransferase; 2.50A {Listeria monocytogenes}
Probab=51.32 E-value=8.3 Score=34.99 Aligned_cols=29 Identities=24% Similarity=0.502 Sum_probs=27.1
Q ss_pred EEEEeeeceeeechhhHHHHHHHHHHHhh
Q 035869 149 LAIGICMSHRIADGFAFSTFINAWAKSCR 177 (429)
Q Consensus 149 l~l~~~~~H~v~Dg~~~~~fl~~wa~~~r 177 (429)
+-|+++++|.+.||.-...|++.+.+...
T Consensus 210 m~lsLs~DHRviDGa~aa~Fl~~lk~~Le 238 (256)
T 3mae_A 210 VNLCLSIDHRILDGLLAGKFLQAIKANVE 238 (256)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEccccccHHHHHHHHHHHHHHHh
Confidence 45899999999999999999999999987
No 22
>3l60_A Branched-chain alpha-keto acid dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: c.43.1.0
Probab=49.82 E-value=9 Score=34.59 Aligned_cols=29 Identities=17% Similarity=0.393 Sum_probs=27.0
Q ss_pred EEEEeeeceeeechhhHHHHHHHHHHHhh
Q 035869 149 LAIGICMSHRIADGFAFSTFINAWAKSCR 177 (429)
Q Consensus 149 l~l~~~~~H~v~Dg~~~~~fl~~wa~~~r 177 (429)
+-|+++++|.+.||.-...|++.+.+...
T Consensus 205 m~lsLs~DHRviDGa~aa~Fl~~lk~~Le 233 (250)
T 3l60_A 205 MTLTCVFDHRVVDGAQVAQFMCELRDLIE 233 (250)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHH
T ss_pred eEEEEEecccccCHHHHHHHHHHHHHHHh
Confidence 46899999999999999999999999887
No 23
>2xl1_A Arginine attenuator peptide; translation, antibiotic, ribosome, cytomegalovirus; NMR {Neurospora crassa}
Probab=45.51 E-value=11 Score=20.15 Aligned_cols=18 Identities=17% Similarity=0.305 Sum_probs=14.9
Q ss_pred CCCchhhHHHHHHHHHHH
Q 035869 239 QVTRVQMVIALIWKAHIS 256 (429)
Q Consensus 239 ~~St~d~l~A~lW~~~~~ 256 (429)
-+++.|-|+-++|++++.
T Consensus 7 vftsqdylsdhlwralna 24 (26)
T 2xl1_A 7 VFTSQDYLSDHLWRALNA 24 (26)
T ss_pred eeecHHHHHHHHHHHHhc
Confidence 357789999999998864
No 24
>3dva_I Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase...; oxidoreductase, multienzyme complex; HET: TPW; 2.35A {Bacillus stearothermophilus} PDB: 3dv0_I* 3duf_I* 1b5s_A 1lab_A 1lac_A 1w3d_A
Probab=35.89 E-value=7.7 Score=38.08 Aligned_cols=29 Identities=24% Similarity=0.401 Sum_probs=0.0
Q ss_pred EEEEeeeceeeechhhHHHHHHHHHHHhh
Q 035869 149 LAIGICMSHRIADGFAFSTFINAWAKSCR 177 (429)
Q Consensus 149 l~l~~~~~H~v~Dg~~~~~fl~~wa~~~r 177 (429)
+-|+++++|.+.||.-...|++.+.+...
T Consensus 391 m~lsls~DHRviDG~~aa~Fl~~lk~~Le 419 (428)
T 3dva_I 391 LALSLSFDHRMIDGATAQKALNHIKRLLS 419 (428)
T ss_dssp -----------------------------
T ss_pred EEEEEEecccccchHHHHHHHHHHHHHHh
Confidence 35899999999999999999999998876
Done!