Query 035870
Match_columns 842
No_of_seqs 709 out of 6279
Neff 9.5
Searched_HMMs 29240
Date Mon Mar 25 11:54:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/035870.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/035870hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hem_A Cyclopropane-fatty-acyl 100.0 4.6E-45 1.6E-49 389.8 29.3 270 569-842 12-297 (302)
2 1kpg_A CFA synthase;, cyclopro 100.0 2.1E-41 7.3E-46 359.0 27.4 271 568-842 3-282 (287)
3 2fk8_A Methoxy mycolic acid sy 100.0 1.3E-39 4.5E-44 350.4 26.9 273 566-842 27-308 (318)
4 3nks_A Protoporphyrinogen oxid 100.0 7.6E-34 2.6E-38 324.0 26.3 397 1-420 3-474 (477)
5 3i6d_A Protoporphyrinogen oxid 100.0 2E-33 6.9E-38 320.0 27.8 399 1-418 6-466 (470)
6 2ivd_A PPO, PPOX, protoporphyr 100.0 2.7E-32 9.3E-37 311.2 34.3 392 1-419 17-472 (478)
7 3lov_A Protoporphyrinogen oxid 100.0 2E-32 6.7E-37 312.0 25.6 399 1-420 5-465 (475)
8 3ka7_A Oxidoreductase; structu 100.0 2.9E-32 9.8E-37 306.2 24.8 390 1-418 1-425 (425)
9 2vvm_A Monoamine oxidase N; FA 100.0 8.9E-32 3E-36 308.1 28.2 399 1-419 40-484 (495)
10 1s3e_A Amine oxidase [flavin-c 100.0 3.5E-31 1.2E-35 304.8 31.2 397 1-418 5-452 (520)
11 2b9w_A Putative aminooxidase; 100.0 1.6E-31 5.3E-36 299.9 26.2 388 1-417 7-423 (424)
12 4gde_A UDP-galactopyranose mut 100.0 1.4E-31 4.8E-36 308.3 25.5 395 2-420 12-479 (513)
13 1sez_A Protoporphyrinogen oxid 100.0 2.2E-31 7.6E-36 305.7 23.8 398 1-418 14-491 (504)
14 3nrn_A Uncharacterized protein 100.0 8.9E-31 3E-35 293.3 25.2 380 1-419 1-405 (421)
15 2yg5_A Putrescine oxidase; oxi 100.0 3E-30 1E-34 292.1 24.9 398 1-418 6-449 (453)
16 3bus_A REBM, methyltransferase 100.0 6.7E-30 2.3E-34 268.5 23.5 243 572-823 4-251 (273)
17 4dgk_A Phytoene dehydrogenase; 100.0 2.9E-29 9.9E-34 287.9 28.5 285 1-305 2-316 (501)
18 4dsg_A UDP-galactopyranose mut 100.0 7.9E-29 2.7E-33 280.8 24.3 389 1-417 10-452 (484)
19 3k7m_X 6-hydroxy-L-nicotine ox 100.0 6.6E-29 2.3E-33 279.2 19.9 393 1-419 2-425 (431)
20 2o57_A Putative sarcosine dime 100.0 2.2E-27 7.5E-32 252.5 27.6 259 568-840 14-286 (297)
21 1rsg_A FMS1 protein; FAD bindi 100.0 1.4E-28 4.9E-33 282.3 18.6 276 1-310 9-309 (516)
22 2jae_A L-amino acid oxidase; o 99.9 2.4E-28 8.2E-33 279.2 10.8 287 1-309 12-334 (489)
23 1b37_A Protein (polyamine oxid 99.9 1.5E-26 5.3E-31 262.6 25.6 390 1-418 5-456 (472)
24 2bi7_A UDP-galactopyranose mut 99.9 5.3E-27 1.8E-31 257.6 19.2 351 1-418 4-368 (384)
25 1i8t_A UDP-galactopyranose mut 99.9 3.6E-27 1.2E-31 257.4 16.8 355 1-419 2-366 (367)
26 1v0j_A UDP-galactopyranose mut 99.9 9.4E-28 3.2E-32 265.4 10.7 360 1-418 8-385 (399)
27 2iid_A L-amino-acid oxidase; f 99.9 5.1E-26 1.8E-30 260.5 23.4 395 1-419 34-483 (498)
28 4gut_A Lysine-specific histone 99.9 1.3E-25 4.6E-30 264.8 24.5 382 1-418 337-775 (776)
29 3vc1_A Geranyl diphosphate 2-C 99.9 1.8E-25 6.1E-30 239.1 18.2 238 568-823 57-298 (312)
30 2z3y_A Lysine-specific histone 99.9 4.6E-24 1.6E-28 250.7 27.5 209 205-418 391-656 (662)
31 2xag_A Lysine-specific histone 99.9 1.7E-24 5.7E-29 256.8 22.7 209 205-419 562-828 (852)
32 3qj4_A Renalase; FAD/NAD(P)-bi 99.9 1.4E-24 4.9E-29 235.7 19.8 204 206-418 103-340 (342)
33 3ujc_A Phosphoethanolamine N-m 99.9 1.6E-23 5.4E-28 218.9 20.9 210 616-835 42-257 (266)
34 3bkx_A SAM-dependent methyltra 99.9 4.4E-24 1.5E-28 224.3 14.3 225 607-842 21-270 (275)
35 3kkz_A Uncharacterized protein 99.9 9.9E-24 3.4E-28 220.5 16.6 209 618-836 34-254 (267)
36 3ayj_A Pro-enzyme of L-phenyla 99.9 1.2E-22 4.1E-27 233.9 20.7 291 1-310 57-496 (721)
37 1dl5_A Protein-L-isoaspartate 99.9 4.1E-26 1.4E-30 244.0 -8.9 233 589-841 28-277 (317)
38 3hdq_A UDP-galactopyranose mut 99.9 8.9E-22 3E-26 214.1 19.9 345 2-419 31-390 (397)
39 2bcg_G Secretory pathway GDP d 99.9 2.7E-20 9.2E-25 209.3 28.8 255 1-270 12-299 (453)
40 1yvv_A Amine oxidase, flavin-c 99.9 3.9E-21 1.3E-25 208.1 19.4 300 1-420 3-327 (336)
41 3dli_A Methyltransferase; PSI- 99.8 1.5E-21 5.1E-26 200.4 11.1 171 627-817 39-224 (240)
42 4htf_A S-adenosylmethionine-de 99.8 6.7E-20 2.3E-24 193.3 14.5 203 616-837 56-268 (285)
43 1d5t_A Guanine nucleotide diss 99.8 1.3E-18 4.4E-23 194.3 22.7 257 1-270 7-289 (433)
44 4gek_A TRNA (CMO5U34)-methyltr 99.8 3.9E-19 1.3E-23 183.3 16.5 113 627-740 68-183 (261)
45 3p1w_A Rabgdi protein; GDI RAB 99.8 6.8E-19 2.3E-23 194.9 19.4 255 2-269 22-312 (475)
46 3f4k_A Putative methyltransfer 99.8 1.5E-18 5.1E-23 180.1 20.1 162 618-788 34-197 (257)
47 2e1m_A L-glutamate oxidase; L- 99.8 4.7E-19 1.6E-23 191.0 16.8 248 1-267 45-369 (376)
48 1nkv_A Hypothetical protein YJ 99.8 5.7E-18 2E-22 175.5 23.0 165 616-788 23-188 (256)
49 1vl5_A Unknown conserved prote 99.8 6.3E-19 2.2E-23 183.2 14.9 183 611-802 19-203 (260)
50 3mgg_A Methyltransferase; NYSG 99.8 1.7E-18 5.7E-23 181.7 16.9 189 598-790 6-201 (276)
51 3iv6_A Putative Zn-dependent a 99.8 1E-18 3.5E-23 178.3 13.0 148 617-770 33-206 (261)
52 3ou2_A SAM-dependent methyltra 99.8 4E-18 1.4E-22 172.0 16.8 166 619-791 35-209 (218)
53 1xxl_A YCGJ protein; structura 99.8 6.9E-18 2.4E-22 172.8 17.6 179 615-802 7-187 (239)
54 1pjz_A Thiopurine S-methyltran 99.8 4.8E-18 1.6E-22 169.0 15.1 153 619-788 12-177 (203)
55 1ri5_A MRNA capping enzyme; me 99.8 3E-18 1E-22 182.0 14.5 218 567-796 13-259 (298)
56 3h2b_A SAM-dependent methyltra 99.8 1.1E-17 3.6E-22 166.9 17.4 181 575-789 3-184 (203)
57 3dtn_A Putative methyltransfer 99.8 3.6E-18 1.2E-22 174.4 13.3 164 619-786 33-213 (234)
58 3hnr_A Probable methyltransfer 99.8 4.4E-18 1.5E-22 172.0 13.5 163 619-788 35-202 (220)
59 3dh0_A SAM dependent methyltra 99.7 2.6E-17 8.8E-22 166.2 17.9 154 619-789 27-183 (219)
60 3dlc_A Putative S-adenosyl-L-m 99.7 4.9E-18 1.7E-22 171.5 10.5 166 616-786 31-202 (219)
61 3p2e_A 16S rRNA methylase; met 99.7 6.8E-19 2.3E-23 177.5 4.1 174 627-820 22-211 (225)
62 3lcc_A Putative methyl chlorid 99.7 2.5E-17 8.4E-22 168.3 14.8 153 619-789 57-209 (235)
63 1xtp_A LMAJ004091AAA; SGPP, st 99.7 5.9E-17 2E-21 167.6 17.7 164 610-787 74-238 (254)
64 3g2m_A PCZA361.24; SAM-depende 99.7 1.3E-17 4.5E-22 177.0 12.2 170 616-788 70-275 (299)
65 3ocj_A Putative exported prote 99.7 1.7E-17 5.7E-22 176.5 12.9 167 624-791 113-295 (305)
66 3jwh_A HEN1; methyltransferase 99.7 4.5E-17 1.5E-21 164.1 15.2 119 617-735 17-141 (217)
67 3jwg_A HEN1, methyltransferase 99.7 6.6E-17 2.2E-21 163.2 16.4 120 616-735 16-141 (219)
68 3e23_A Uncharacterized protein 99.7 8E-17 2.7E-21 161.5 16.8 147 619-787 35-182 (211)
69 2ex4_A Adrenal gland protein A 99.7 1.9E-17 6.4E-22 169.9 12.3 147 628-787 78-225 (241)
70 4fsd_A Arsenic methyltransfera 99.7 3.6E-17 1.2E-21 179.4 15.0 154 627-786 81-250 (383)
71 3fpf_A Mtnas, putative unchara 99.7 2.2E-17 7.4E-22 169.4 12.0 167 562-735 54-222 (298)
72 2yqz_A Hypothetical protein TT 99.7 1.5E-17 5.1E-22 173.1 10.4 171 626-803 36-212 (263)
73 2p7i_A Hypothetical protein; p 99.7 5.9E-17 2E-21 167.1 14.5 159 620-787 32-199 (250)
74 3l8d_A Methyltransferase; stru 99.7 3.2E-16 1.1E-20 160.8 18.1 148 627-787 51-200 (242)
75 2xvm_A Tellurite resistance pr 99.7 5.2E-16 1.8E-20 153.9 18.9 151 620-787 23-173 (199)
76 2r3s_A Uncharacterized protein 99.7 1.8E-16 6.3E-21 171.1 16.4 171 617-789 151-325 (335)
77 2gb4_A Thiopurine S-methyltran 99.7 3.2E-16 1.1E-20 160.6 17.1 146 626-788 65-228 (252)
78 3g5l_A Putative S-adenosylmeth 99.7 3.3E-16 1.1E-20 161.9 17.2 165 619-790 34-219 (253)
79 2p35_A Trans-aconitate 2-methy 99.7 1.7E-16 6E-21 164.6 14.9 161 616-785 20-188 (259)
80 3ccf_A Cyclopropane-fatty-acyl 99.7 2.4E-16 8.1E-21 165.4 15.5 157 620-787 48-210 (279)
81 2y1w_A Histone-arginine methyl 99.7 2E-17 6.7E-22 178.7 6.9 178 619-799 40-223 (348)
82 4e2x_A TCAB9; kijanose, tetron 99.7 1.1E-16 3.8E-21 178.1 12.9 171 604-788 82-254 (416)
83 3gwz_A MMCR; methyltransferase 99.7 1.3E-15 4.4E-20 166.2 20.9 165 617-786 190-355 (369)
84 3ege_A Putative methyltransfer 99.7 9.1E-17 3.1E-21 166.8 11.0 156 616-787 21-178 (261)
85 3e8s_A Putative SAM dependent 99.7 9.9E-17 3.4E-21 162.8 11.0 155 619-787 42-209 (227)
86 3i53_A O-methyltransferase; CO 99.7 6.7E-16 2.3E-20 166.2 17.7 164 619-789 159-323 (332)
87 3gu3_A Methyltransferase; alph 99.7 2.7E-16 9.4E-21 165.3 13.7 164 618-786 10-189 (284)
88 2a14_A Indolethylamine N-methy 99.7 1.1E-16 3.8E-21 166.1 10.5 152 626-789 52-240 (263)
89 3sm3_A SAM-dependent methyltra 99.7 4.9E-16 1.7E-20 158.6 14.6 159 627-787 28-207 (235)
90 1y8c_A S-adenosylmethionine-de 99.7 7.3E-16 2.5E-20 158.5 15.6 107 628-737 36-144 (246)
91 3pfg_A N-methyltransferase; N, 99.7 3.4E-16 1.2E-20 162.8 13.2 106 628-740 49-156 (263)
92 3mcz_A O-methyltransferase; ad 99.7 7E-16 2.4E-20 167.7 15.7 165 618-784 167-336 (352)
93 3b3j_A Histone-arginine methyl 99.7 4.6E-17 1.6E-21 182.0 5.8 185 618-805 147-337 (480)
94 3cc8_A Putative methyltransfer 99.7 1.1E-15 3.8E-20 155.3 15.4 174 620-807 24-204 (230)
95 1ve3_A Hypothetical protein PH 99.6 2.1E-15 7.3E-20 152.9 17.5 118 615-737 26-144 (227)
96 1qzz_A RDMB, aclacinomycin-10- 99.6 1.4E-15 4.8E-20 166.8 17.0 167 619-789 172-341 (374)
97 3m70_A Tellurite resistance pr 99.6 2.6E-15 8.8E-20 158.2 17.8 146 623-786 114-259 (286)
98 3i9f_A Putative type 11 methyl 99.6 6.1E-16 2.1E-20 149.3 11.9 144 619-789 7-150 (170)
99 3g5t_A Trans-aconitate 3-methy 99.6 1.8E-15 6.2E-20 160.4 16.6 111 624-737 31-151 (299)
100 3mq2_A 16S rRNA methyltransfer 99.6 4.4E-17 1.5E-21 164.3 3.9 179 621-812 19-210 (218)
101 3bkw_A MLL3908 protein, S-aden 99.6 1.2E-15 4.2E-20 156.5 14.6 163 620-790 34-217 (243)
102 2g72_A Phenylethanolamine N-me 99.6 2.8E-16 9.4E-21 165.8 9.9 162 616-788 56-257 (289)
103 1zx0_A Guanidinoacetate N-meth 99.6 1E-16 3.6E-21 163.7 6.4 158 577-737 6-172 (236)
104 2p8j_A S-adenosylmethionine-de 99.6 1.1E-15 3.8E-20 152.9 13.7 155 627-784 21-180 (209)
105 3bgv_A MRNA CAP guanine-N7 met 99.6 8.8E-16 3E-20 163.9 13.7 171 628-799 33-244 (313)
106 3grz_A L11 mtase, ribosomal pr 99.6 2E-15 6.9E-20 150.5 15.3 160 588-790 29-188 (205)
107 3dp7_A SAM-dependent methyltra 99.6 1.2E-15 4.1E-20 166.1 14.6 157 628-786 178-341 (363)
108 1x19_A CRTF-related protein; m 99.6 6.5E-15 2.2E-19 160.3 19.5 165 618-788 179-349 (359)
109 3ofk_A Nodulation protein S; N 99.6 1.1E-15 3.7E-20 153.9 12.2 115 619-737 41-156 (216)
110 1tw3_A COMT, carminomycin 4-O- 99.6 3E-15 1E-19 163.2 16.5 166 619-788 173-340 (360)
111 3njr_A Precorrin-6Y methylase; 99.6 5.1E-15 1.7E-19 147.0 16.5 111 619-737 45-156 (204)
112 2kw5_A SLR1183 protein; struct 99.6 2.5E-15 8.7E-20 149.4 14.4 143 628-788 29-172 (202)
113 3mti_A RRNA methylase; SAM-dep 99.6 4.1E-15 1.4E-19 145.6 15.4 110 626-737 19-137 (185)
114 2ip2_A Probable phenazine-spec 99.6 2.8E-15 9.6E-20 161.6 15.1 166 618-788 157-323 (334)
115 3d2l_A SAM-dependent methyltra 99.6 1.5E-14 5.3E-19 148.3 19.8 112 619-736 25-138 (243)
116 4hg2_A Methyltransferase type 99.6 7.3E-16 2.5E-20 158.1 9.6 108 619-739 31-139 (257)
117 2aot_A HMT, histamine N-methyl 99.6 1.8E-15 6.3E-20 159.6 12.6 158 620-784 42-218 (292)
118 3bxo_A N,N-dimethyltransferase 99.6 5.7E-15 1.9E-19 151.1 15.8 106 628-740 39-146 (239)
119 2vdw_A Vaccinia virus capping 99.6 2.1E-15 7E-20 158.9 12.5 160 628-789 47-248 (302)
120 3thr_A Glycine N-methyltransfe 99.6 4.6E-15 1.6E-19 156.8 15.3 118 619-737 47-177 (293)
121 1wzn_A SAM-dependent methyltra 99.6 5.5E-15 1.9E-19 152.5 15.5 120 615-737 27-147 (252)
122 3lst_A CALO1 methyltransferase 99.6 3.7E-15 1.3E-19 161.3 14.1 162 618-786 173-335 (348)
123 3e05_A Precorrin-6Y C5,15-meth 99.6 1.5E-14 5.1E-19 144.0 17.2 113 618-736 29-143 (204)
124 2i62_A Nicotinamide N-methyltr 99.6 3.4E-15 1.2E-19 155.4 12.7 154 626-791 53-243 (265)
125 2gs9_A Hypothetical protein TT 99.6 4.4E-15 1.5E-19 148.8 12.9 142 619-774 27-170 (211)
126 1vlm_A SAM-dependent methyltra 99.6 6.3E-15 2.1E-19 148.5 13.6 140 630-787 48-188 (219)
127 3cgg_A SAM-dependent methyltra 99.6 1.4E-14 4.6E-19 143.0 15.8 134 621-786 39-174 (195)
128 3dxy_A TRNA (guanine-N(7)-)-me 99.6 3E-15 1E-19 150.1 11.0 106 629-735 34-150 (218)
129 3g07_A 7SK snRNA methylphospha 99.6 2.4E-15 8.3E-20 158.4 10.7 153 629-786 46-268 (292)
130 3evz_A Methyltransferase; NYSG 99.6 2E-14 6.7E-19 146.1 16.8 136 624-786 50-205 (230)
131 3hm2_A Precorrin-6Y C5,15-meth 99.6 8.9E-15 3.1E-19 142.2 13.5 115 616-737 12-129 (178)
132 3eey_A Putative rRNA methylase 99.6 1.1E-14 3.6E-19 144.2 13.4 116 623-738 16-142 (197)
133 2qe6_A Uncharacterized protein 99.6 1.7E-14 5.7E-19 149.9 15.4 165 610-783 57-238 (274)
134 3p9n_A Possible methyltransfer 99.6 1.9E-14 6.6E-19 141.3 15.0 109 628-738 43-156 (189)
135 3lbf_A Protein-L-isoaspartate 99.6 1E-14 3.5E-19 145.9 13.2 112 616-737 64-176 (210)
136 3fzg_A 16S rRNA methylase; met 99.6 1.9E-14 6.6E-19 135.7 13.7 104 628-735 48-152 (200)
137 4a6d_A Hydroxyindole O-methylt 99.6 3.4E-14 1.2E-18 153.6 16.1 167 618-788 168-335 (353)
138 4df3_A Fibrillarin-like rRNA/T 99.6 1.2E-14 4.1E-19 144.8 11.4 143 623-789 71-219 (233)
139 3uwp_A Histone-lysine N-methyl 99.6 9.8E-15 3.4E-19 154.7 11.2 124 615-741 159-294 (438)
140 2nxc_A L11 mtase, ribosomal pr 99.6 2.8E-14 9.7E-19 146.8 14.4 157 589-789 90-246 (254)
141 3htx_A HEN1; HEN1, small RNA m 99.5 5.2E-14 1.8E-18 159.8 17.5 120 617-738 709-837 (950)
142 1dus_A MJ0882; hypothetical pr 99.5 4.3E-14 1.5E-18 139.3 15.0 118 619-738 42-160 (194)
143 3ggd_A SAM-dependent methyltra 99.5 1.5E-14 5E-19 148.6 12.0 151 627-787 54-219 (245)
144 2avn_A Ubiquinone/menaquinone 99.5 3.8E-14 1.3E-18 146.9 14.6 142 566-738 13-155 (260)
145 3nyc_A D-arginine dehydrogenas 99.5 1.1E-13 3.7E-18 152.2 18.8 192 214-422 153-361 (381)
146 3orh_A Guanidinoacetate N-meth 99.5 4.7E-15 1.6E-19 150.9 7.2 105 627-735 58-170 (236)
147 1xdz_A Methyltransferase GIDB; 99.5 3.9E-14 1.3E-18 144.8 14.1 130 627-787 68-202 (240)
148 3lpm_A Putative methyltransfer 99.5 6.8E-14 2.3E-18 144.7 15.9 114 621-734 40-175 (259)
149 1yub_A Ermam, rRNA methyltrans 99.5 8E-17 2.8E-21 165.1 -6.2 188 617-831 17-244 (245)
150 3dje_A Fructosyl amine: oxygen 99.5 1.6E-14 5.6E-19 162.0 12.0 58 214-271 160-221 (438)
151 3reo_A (ISO)eugenol O-methyltr 99.5 5.4E-14 1.8E-18 153.1 15.5 160 618-788 191-356 (368)
152 2esr_A Methyltransferase; stru 99.5 3.2E-14 1.1E-18 138.1 11.8 120 617-739 18-142 (177)
153 3kkj_A Amine oxidase, flavin-c 99.5 5.2E-13 1.8E-17 140.1 22.1 56 2-57 4-59 (336)
154 3p9c_A Caffeic acid O-methyltr 99.5 7.7E-14 2.6E-18 151.5 15.5 160 617-788 188-354 (364)
155 3ps9_A TRNA 5-methylaminomethy 99.5 1.1E-13 3.8E-18 163.5 18.0 57 214-270 416-472 (676)
156 1vg0_A RAB proteins geranylger 99.5 6.5E-13 2.2E-17 151.2 22.8 113 144-266 313-432 (650)
157 2frn_A Hypothetical protein PH 99.5 1.2E-13 4.2E-18 144.0 15.7 131 627-783 123-253 (278)
158 3pvc_A TRNA 5-methylaminomethy 99.5 5.4E-14 1.8E-18 166.3 14.5 57 214-270 411-468 (689)
159 2h00_A Methyltransferase 10 do 99.5 1E-14 3.5E-19 150.6 7.0 153 629-787 65-238 (254)
160 2pxx_A Uncharacterized protein 99.5 6.6E-14 2.3E-18 140.5 12.3 110 627-739 40-163 (215)
161 3gdh_A Trimethylguanosine synt 99.5 2.6E-15 8.9E-20 153.8 2.0 104 628-734 77-180 (241)
162 4dcm_A Ribosomal RNA large sub 99.5 1E-13 3.4E-18 150.3 14.2 131 599-735 198-334 (375)
163 2fhp_A Methylase, putative; al 99.5 8.2E-14 2.8E-18 136.5 12.3 117 619-738 33-157 (187)
164 2ift_A Putative methylase HI07 99.5 5E-14 1.7E-18 139.6 10.8 107 629-738 53-166 (201)
165 2yxe_A Protein-L-isoaspartate 99.5 8.5E-14 2.9E-18 139.8 12.3 140 616-765 64-207 (215)
166 1l3i_A Precorrin-6Y methyltran 99.5 1.3E-13 4.4E-18 135.6 13.3 113 618-736 22-135 (192)
167 3u81_A Catechol O-methyltransf 99.5 3.3E-14 1.1E-18 143.4 9.1 110 627-739 56-174 (221)
168 3dr5_A Putative O-methyltransf 99.5 1.1E-13 3.9E-18 138.8 12.7 120 614-738 41-166 (221)
169 2yxd_A Probable cobalt-precorr 99.5 3.6E-13 1.2E-17 131.3 16.0 133 617-785 23-155 (183)
170 1fp1_D Isoliquiritigenin 2'-O- 99.5 8.5E-14 2.9E-18 152.1 12.8 158 617-786 196-359 (372)
171 3lec_A NADB-rossmann superfami 99.5 2.7E-13 9.2E-18 134.4 14.9 106 627-736 19-126 (230)
172 3g89_A Ribosomal RNA small sub 99.5 1E-13 3.6E-18 141.8 12.4 102 627-735 78-184 (249)
173 3kr9_A SAM-dependent methyltra 99.5 3.1E-13 1E-17 133.8 15.3 106 627-736 13-120 (225)
174 2b3t_A Protein methyltransfera 99.5 2.9E-13 9.8E-18 141.5 15.9 116 617-734 98-237 (276)
175 2fca_A TRNA (guanine-N(7)-)-me 99.5 1.1E-13 3.8E-18 138.4 12.2 107 628-735 37-153 (213)
176 3ntv_A MW1564 protein; rossman 99.5 8.2E-14 2.8E-18 141.5 11.3 110 624-738 66-179 (232)
177 2fyt_A Protein arginine N-meth 99.5 1.4E-13 4.6E-18 147.9 13.1 114 619-733 54-169 (340)
178 1vbf_A 231AA long hypothetical 99.5 1.2E-13 4.2E-18 140.3 12.2 112 616-739 57-169 (231)
179 3dmg_A Probable ribosomal RNA 99.5 2.4E-13 8.3E-18 147.4 15.0 118 616-736 218-341 (381)
180 3r0q_C Probable protein argini 99.5 1.1E-13 3.9E-18 150.6 12.2 117 619-736 53-170 (376)
181 4azs_A Methyltransferase WBDD; 99.5 7.8E-14 2.7E-18 160.5 11.3 111 628-740 65-178 (569)
182 3q7e_A Protein arginine N-meth 99.5 8.9E-14 3.1E-18 150.0 10.8 109 625-734 62-172 (349)
183 2uzz_A N-methyl-L-tryptophan o 99.5 2.2E-13 7.7E-18 149.2 14.0 191 214-422 148-360 (372)
184 3giw_A Protein of unknown func 99.5 2.5E-13 8.5E-18 137.6 12.8 169 609-783 57-243 (277)
185 1u2z_A Histone-lysine N-methyl 99.5 1.9E-13 6.4E-18 149.0 12.6 121 616-739 229-363 (433)
186 3dme_A Conserved exported prot 99.5 5.3E-13 1.8E-17 145.9 16.4 195 214-416 149-367 (369)
187 1o9g_A RRNA methyltransferase; 99.5 1.2E-13 4.3E-18 142.0 10.7 120 616-735 38-214 (250)
188 1yzh_A TRNA (guanine-N(7)-)-me 99.5 3E-13 1E-17 135.6 13.2 107 628-735 40-156 (214)
189 3gnl_A Uncharacterized protein 99.5 4.4E-13 1.5E-17 133.9 14.2 106 627-736 19-126 (244)
190 3id6_C Fibrillarin-like rRNA/T 99.5 9.3E-13 3.2E-17 131.7 16.3 146 620-789 64-218 (232)
191 1ryi_A Glycine oxidase; flavop 99.5 5.9E-13 2E-17 146.4 16.2 190 215-421 164-364 (382)
192 1yb2_A Hypothetical protein TA 99.5 2.5E-13 8.4E-18 141.8 12.4 110 619-736 100-212 (275)
193 2fpo_A Methylase YHHF; structu 99.4 2.3E-13 7.9E-18 134.9 11.1 105 629-737 54-162 (202)
194 3m33_A Uncharacterized protein 99.4 2.1E-13 7.2E-18 138.0 10.8 130 628-799 47-180 (226)
195 1fbn_A MJ fibrillarin homologu 99.4 2.2E-13 7.5E-18 138.2 10.9 105 622-734 67-177 (230)
196 4hc4_A Protein arginine N-meth 99.4 1.5E-13 5.2E-18 147.2 9.8 107 627-734 81-188 (376)
197 1y56_B Sarcosine oxidase; dehy 99.4 9.7E-13 3.3E-17 144.7 16.6 191 214-420 148-356 (382)
198 3q87_B N6 adenine specific DNA 99.4 4.7E-13 1.6E-17 128.7 12.1 120 628-786 22-148 (170)
199 1jg1_A PIMT;, protein-L-isoasp 99.4 3.4E-13 1.2E-17 137.3 11.7 114 616-738 78-192 (235)
200 3mb5_A SAM-dependent methyltra 99.4 4.5E-13 1.6E-17 138.3 12.8 111 618-735 82-194 (255)
201 1ws6_A Methyltransferase; stru 99.4 2.2E-13 7.4E-18 131.3 9.7 105 628-739 40-151 (171)
202 1g6q_1 HnRNP arginine N-methyl 99.4 3.2E-13 1.1E-17 144.4 12.0 113 620-733 29-143 (328)
203 3tfw_A Putative O-methyltransf 99.4 5.2E-13 1.8E-17 136.9 12.9 108 627-739 61-174 (248)
204 2gpy_A O-methyltransferase; st 99.4 3.7E-13 1.3E-17 136.9 11.5 112 621-737 46-162 (233)
205 3duw_A OMT, O-methyltransferas 99.4 3E-13 1E-17 136.6 10.7 108 627-739 56-171 (223)
206 1nt2_A Fibrillarin-like PRE-rR 99.4 6.3E-13 2.2E-17 132.3 12.9 104 625-735 53-161 (210)
207 2ozv_A Hypothetical protein AT 99.4 2.3E-13 7.8E-18 140.5 9.9 115 621-735 28-170 (260)
208 1jsx_A Glucose-inhibited divis 99.4 3.5E-13 1.2E-17 134.4 10.9 99 629-734 65-164 (207)
209 2pwy_A TRNA (adenine-N(1)-)-me 99.4 1.2E-12 3.9E-17 135.5 14.5 109 619-735 86-198 (258)
210 2gag_B Heterotetrameric sarcos 99.4 1.7E-12 5.7E-17 144.0 16.7 186 215-420 174-376 (405)
211 1fp2_A Isoflavone O-methyltran 99.4 5.6E-13 1.9E-17 144.5 12.4 149 626-787 185-341 (352)
212 2ipx_A RRNA 2'-O-methyltransfe 99.4 5.9E-13 2E-17 135.4 11.7 107 622-735 70-182 (233)
213 3tr6_A O-methyltransferase; ce 99.4 3.9E-13 1.3E-17 135.9 10.3 107 628-739 63-178 (225)
214 3k6r_A Putative transferase PH 99.4 9.4E-13 3.2E-17 135.1 13.0 106 627-738 123-228 (278)
215 3bzb_A Uncharacterized protein 99.4 2.2E-12 7.6E-17 134.7 16.1 146 618-787 68-237 (281)
216 2pjd_A Ribosomal RNA small sub 99.4 6.1E-13 2.1E-17 143.3 11.9 116 619-737 186-305 (343)
217 1ixk_A Methyltransferase; open 99.4 1.3E-12 4.4E-17 138.6 14.1 119 620-739 109-250 (315)
218 2oln_A NIKD protein; flavoprot 99.4 1.8E-12 6E-17 143.4 15.8 57 214-271 152-208 (397)
219 3ckk_A TRNA (guanine-N(7)-)-me 99.4 6.1E-13 2.1E-17 134.7 10.7 108 627-735 44-168 (235)
220 2igt_A SAM dependent methyltra 99.4 1.1E-12 3.9E-17 139.6 13.0 110 627-737 151-274 (332)
221 3r3h_A O-methyltransferase, SA 99.4 1.5E-13 5.1E-18 140.1 6.0 108 628-740 59-175 (242)
222 4dzr_A Protein-(glutamine-N5) 99.4 1.2E-13 4.1E-18 138.5 4.9 116 616-733 16-162 (215)
223 1o54_A SAM-dependent O-methylt 99.4 1.7E-12 5.9E-17 135.6 13.8 110 619-735 102-213 (277)
224 1i1n_A Protein-L-isoaspartate 99.4 2E-12 7E-17 130.7 13.8 112 619-738 65-185 (226)
225 3ajd_A Putative methyltransfer 99.4 1.8E-12 6E-17 135.0 13.4 117 622-739 76-215 (274)
226 1nv8_A HEMK protein; class I a 99.4 1.6E-12 5.5E-17 135.6 12.7 115 619-734 113-248 (284)
227 1sui_A Caffeoyl-COA O-methyltr 99.4 7.7E-13 2.6E-17 135.3 10.0 106 628-738 78-193 (247)
228 2gf3_A MSOX, monomeric sarcosi 99.4 1.9E-12 6.5E-17 142.7 14.0 192 215-422 150-367 (389)
229 2yvl_A TRMI protein, hypotheti 99.4 3.6E-12 1.2E-16 130.9 14.3 110 619-736 81-191 (248)
230 2zfu_A Nucleomethylin, cerebra 99.4 9.8E-13 3.4E-17 132.0 9.8 115 627-788 65-180 (215)
231 3hp7_A Hemolysin, putative; st 99.4 4.9E-13 1.7E-17 137.7 7.4 152 616-786 71-231 (291)
232 1i9g_A Hypothetical protein RV 99.4 2.5E-12 8.5E-17 134.8 12.8 113 618-737 88-205 (280)
233 3c3p_A Methyltransferase; NP_9 99.4 9E-13 3.1E-17 131.7 8.9 105 628-738 55-163 (210)
234 2pbf_A Protein-L-isoaspartate 99.4 2E-12 6.7E-17 131.0 11.5 111 619-737 68-195 (227)
235 1r18_A Protein-L-isoaspartate( 99.4 1.2E-12 4.3E-17 132.4 9.9 112 618-737 71-196 (227)
236 1zg3_A Isoflavanone 4'-O-methy 99.4 1.5E-12 5.2E-17 141.4 11.2 156 620-787 182-347 (358)
237 2hnk_A SAM-dependent O-methylt 99.4 1.1E-12 3.6E-17 134.0 9.4 108 626-738 57-184 (239)
238 3tma_A Methyltransferase; thum 99.4 4.1E-12 1.4E-16 137.7 14.0 118 618-736 192-318 (354)
239 1af7_A Chemotaxis receptor met 99.3 1.8E-12 6.3E-17 133.3 10.2 105 629-733 105-250 (274)
240 3bwc_A Spermidine synthase; SA 99.3 4.4E-12 1.5E-16 133.8 13.2 109 627-735 93-210 (304)
241 3c3y_A Pfomt, O-methyltransfer 99.3 2.4E-12 8.3E-17 130.9 10.5 106 628-738 69-184 (237)
242 3a27_A TYW2, uncharacterized p 99.3 2.7E-12 9.4E-17 133.2 11.1 106 626-738 116-222 (272)
243 1g8a_A Fibrillarin-like PRE-rR 99.3 4.3E-12 1.5E-16 128.5 11.4 106 622-734 66-177 (227)
244 3cbg_A O-methyltransferase; cy 99.3 2.7E-12 9.3E-17 130.2 9.4 107 628-739 71-186 (232)
245 2avd_A Catechol-O-methyltransf 99.3 3.6E-12 1.2E-16 129.2 10.0 107 627-738 67-182 (229)
246 1wy7_A Hypothetical protein PH 99.3 2.9E-11 9.8E-16 120.4 16.3 103 624-732 44-146 (207)
247 2vdv_E TRNA (guanine-N(7)-)-me 99.3 7.4E-12 2.5E-16 128.3 11.5 107 627-734 47-172 (246)
248 2ld4_A Anamorsin; methyltransf 99.3 5.4E-12 1.9E-16 122.1 9.5 122 624-786 7-133 (176)
249 3lcv_B Sisomicin-gentamicin re 99.3 9.7E-12 3.3E-16 122.8 11.1 106 628-736 131-237 (281)
250 3tm4_A TRNA (guanine N2-)-meth 99.3 2.4E-11 8.2E-16 132.1 15.3 152 575-733 163-327 (373)
251 2bm8_A Cephalosporin hydroxyla 99.3 2.3E-12 7.7E-17 130.8 6.6 97 629-736 81-188 (236)
252 3adn_A Spermidine synthase; am 99.3 6.2E-12 2.1E-16 131.3 9.9 109 628-736 82-199 (294)
253 3axb_A Putative oxidoreductase 99.3 4.3E-12 1.5E-16 142.6 9.0 193 214-422 180-421 (448)
254 2b25_A Hypothetical protein; s 99.3 1.3E-11 4.3E-16 132.8 12.3 113 618-737 94-221 (336)
255 3opn_A Putative hemolysin; str 99.3 5.8E-13 2E-17 134.3 1.3 152 616-787 23-184 (232)
256 3m6w_A RRNA methylase; rRNA me 99.3 2.1E-11 7.1E-16 134.3 13.6 119 620-740 92-234 (464)
257 2yxl_A PH0851 protein, 450AA l 99.3 4.4E-11 1.5E-15 133.4 16.3 119 620-739 250-393 (450)
258 2plw_A Ribosomal RNA methyltra 99.3 1.5E-11 5.1E-16 121.8 11.2 109 617-737 9-156 (201)
259 3m4x_A NOL1/NOP2/SUN family pr 99.3 2E-11 6.7E-16 134.4 13.0 120 620-740 96-239 (456)
260 3gjy_A Spermidine synthase; AP 99.3 1.5E-11 5.1E-16 128.1 11.2 107 631-738 91-203 (317)
261 3v76_A Flavoprotein; structura 99.3 2.6E-11 8.8E-16 133.7 13.7 62 209-271 126-187 (417)
262 1ej0_A FTSJ; methyltransferase 99.3 9.2E-12 3.1E-16 120.6 9.0 110 617-738 9-139 (180)
263 1p91_A Ribosomal RNA large sub 99.3 1.5E-11 5.2E-16 127.9 11.0 96 628-738 84-181 (269)
264 2b78_A Hypothetical protein SM 99.3 2.4E-11 8.1E-16 132.5 12.9 111 628-738 211-334 (385)
265 1zq9_A Probable dimethyladenos 99.2 8.7E-12 3E-16 130.2 8.5 114 616-732 15-144 (285)
266 1xj5_A Spermidine synthase 1; 99.2 1.8E-11 6.2E-16 130.0 10.8 110 626-735 117-235 (334)
267 3sso_A Methyltransferase; macr 99.2 7.9E-12 2.7E-16 132.4 7.7 107 617-737 205-326 (419)
268 2o07_A Spermidine synthase; st 99.2 2.1E-11 7.1E-16 128.2 10.8 111 627-737 93-211 (304)
269 1ne2_A Hypothetical protein TA 99.2 3.4E-11 1.2E-15 119.1 11.7 92 626-725 48-139 (200)
270 4dmg_A Putative uncharacterize 99.2 3.5E-11 1.2E-15 130.7 12.6 110 627-739 212-330 (393)
271 2frx_A Hypothetical protein YE 99.2 3.6E-11 1.2E-15 133.9 13.0 117 622-739 108-250 (479)
272 2qm3_A Predicted methyltransfe 99.2 2.9E-10 9.8E-15 123.8 19.7 102 627-733 170-275 (373)
273 3dou_A Ribosomal RNA large sub 99.2 2.5E-11 8.5E-16 118.7 9.7 110 616-738 11-142 (191)
274 2as0_A Hypothetical protein PH 99.2 3E-11 1E-15 132.9 11.3 111 628-738 216-338 (396)
275 2b2c_A Spermidine synthase; be 99.2 1E-11 3.5E-16 130.9 7.1 107 628-735 107-222 (314)
276 1uir_A Polyamine aminopropyltr 99.2 3.5E-11 1.2E-15 127.4 11.1 110 628-737 76-197 (314)
277 3c0k_A UPF0064 protein YCCW; P 99.2 4.3E-11 1.5E-15 131.5 12.1 111 628-738 219-342 (396)
278 2pt6_A Spermidine synthase; tr 99.2 1.4E-11 4.7E-16 130.6 7.8 108 628-736 115-231 (321)
279 1sqg_A SUN protein, FMU protei 99.2 9.4E-11 3.2E-15 130.1 14.6 120 619-740 236-379 (429)
280 2i7c_A Spermidine synthase; tr 99.2 3.6E-11 1.2E-15 125.4 10.4 111 626-736 75-193 (283)
281 3frh_A 16S rRNA methylase; met 99.2 1.8E-10 6.3E-15 112.9 14.6 103 628-735 104-206 (253)
282 2wa2_A Non-structural protein 99.2 3.7E-12 1.3E-16 131.6 2.8 117 616-737 69-195 (276)
283 1mjf_A Spermidine synthase; sp 99.2 1.5E-11 5.2E-16 128.2 7.4 108 628-736 74-194 (281)
284 2oxt_A Nucleoside-2'-O-methylt 99.2 4.3E-12 1.5E-16 130.4 2.4 117 616-737 61-187 (265)
285 1wxx_A TT1595, hypothetical pr 99.2 4.8E-11 1.7E-15 130.3 10.5 108 629-738 209-328 (382)
286 1inl_A Spermidine synthase; be 99.2 5E-11 1.7E-15 125.1 10.1 109 628-736 89-206 (296)
287 1iy9_A Spermidine synthase; ro 99.2 2.7E-11 9.1E-16 125.7 7.7 109 628-736 74-190 (275)
288 2yx1_A Hypothetical protein MJ 99.2 7.7E-11 2.6E-15 126.1 11.1 102 628-739 194-295 (336)
289 3v97_A Ribosomal RNA large sub 99.2 8.9E-11 3E-15 137.3 12.1 107 629-737 539-659 (703)
290 2h1r_A Dimethyladenosine trans 99.1 1.5E-10 5.3E-15 121.5 11.2 111 616-730 29-154 (299)
291 2f8l_A Hypothetical protein LM 99.1 1.7E-10 5.7E-15 124.3 11.6 116 619-736 119-257 (344)
292 2nyu_A Putative ribosomal RNA 99.1 1.3E-10 4.5E-15 114.5 9.9 108 618-737 10-147 (196)
293 2i0z_A NAD(FAD)-utilizing dehy 99.1 5.6E-10 1.9E-14 124.9 16.1 59 213-271 132-191 (447)
294 3k0b_A Predicted N6-adenine-sp 99.1 3.9E-10 1.3E-14 122.6 13.6 120 617-736 189-351 (393)
295 3ldg_A Putative uncharacterize 99.1 8.3E-10 2.8E-14 119.3 15.5 119 618-736 183-344 (384)
296 2jjq_A Uncharacterized RNA met 99.1 7E-10 2.4E-14 121.9 14.8 100 627-735 288-387 (425)
297 3ldu_A Putative methylase; str 99.1 3.8E-10 1.3E-14 122.5 12.4 119 617-735 183-344 (385)
298 1uwv_A 23S rRNA (uracil-5-)-me 99.1 7.2E-10 2.4E-14 122.9 14.9 131 593-734 253-388 (433)
299 3rp8_A Flavoprotein monooxygen 99.1 1.6E-09 5.5E-14 119.9 16.8 53 216-270 128-180 (407)
300 2cmg_A Spermidine synthase; tr 99.1 1.4E-10 4.9E-15 118.9 7.3 99 628-736 71-172 (262)
301 3gru_A Dimethyladenosine trans 99.1 1.2E-09 4.2E-14 113.3 14.1 88 616-707 37-125 (295)
302 2okc_A Type I restriction enzy 99.1 2.4E-10 8.1E-15 127.5 9.4 121 616-736 158-308 (445)
303 2p41_A Type II methyltransfera 99.0 7.8E-11 2.7E-15 123.6 4.3 116 617-738 70-194 (305)
304 2gqf_A Hypothetical protein HI 99.0 2.8E-09 9.5E-14 117.1 16.1 57 213-270 107-167 (401)
305 2b9e_A NOL1/NOP2/SUN domain fa 99.0 4.6E-09 1.6E-13 110.2 17.0 117 621-739 94-238 (309)
306 1qam_A ERMC' methyltransferase 99.0 6E-10 2E-14 113.4 9.6 85 616-705 17-103 (244)
307 2vou_A 2,6-dihydroxypyridine h 99.0 4.7E-09 1.6E-13 115.7 17.5 53 216-270 100-152 (397)
308 3cgv_A Geranylgeranyl reductas 99.0 1.6E-09 5.6E-14 119.4 13.6 61 216-276 103-168 (397)
309 3oz2_A Digeranylgeranylglycero 99.0 1.6E-09 5.6E-14 119.2 13.4 37 2-38 6-42 (397)
310 3nlc_A Uncharacterized protein 99.0 7.8E-10 2.7E-14 125.2 10.5 57 215-271 220-277 (549)
311 1pj5_A N,N-dimethylglycine oxi 99.0 3.6E-09 1.2E-13 127.8 16.9 57 214-271 150-207 (830)
312 4hb9_A Similarities with proba 99.0 1.5E-09 5E-14 120.3 12.4 50 216-268 113-163 (412)
313 1y0p_A Fumarate reductase flav 99.0 2.6E-09 8.9E-14 123.4 14.4 56 215-270 255-316 (571)
314 1qo8_A Flavocytochrome C3 fuma 99.0 2.9E-09 9.8E-14 122.9 14.6 57 214-270 249-311 (566)
315 3da1_A Glycerol-3-phosphate de 99.0 2.3E-09 8E-14 123.0 13.2 58 214-271 169-232 (561)
316 3nix_A Flavoprotein/dehydrogen 99.0 1.9E-09 6.5E-14 119.9 12.1 56 216-271 107-166 (421)
317 2xyq_A Putative 2'-O-methyl tr 99.0 1.9E-09 6.4E-14 111.3 11.0 97 625-737 59-173 (290)
318 2ih2_A Modification methylase 99.0 1E-09 3.5E-14 122.1 9.4 111 617-737 27-166 (421)
319 2x3n_A Probable FAD-dependent 99.0 4.2E-09 1.4E-13 116.2 14.3 62 216-277 108-173 (399)
320 2r6z_A UPF0341 protein in RSP 98.9 1E-09 3.5E-14 112.2 8.0 114 621-737 75-218 (258)
321 2qa2_A CABE, polyketide oxygen 98.9 9.3E-09 3.2E-13 116.4 16.8 62 216-277 108-173 (499)
322 4gqb_A Protein arginine N-meth 98.9 3.3E-09 1.1E-13 120.1 12.6 137 583-732 319-464 (637)
323 3alj_A 2-methyl-3-hydroxypyrid 98.9 7.2E-09 2.5E-13 113.4 15.0 59 216-277 108-167 (379)
324 3gwf_A Cyclohexanone monooxyge 98.9 2.7E-09 9.2E-14 121.7 11.3 52 219-270 91-146 (540)
325 2qa1_A PGAE, polyketide oxygen 98.9 1.1E-08 3.6E-13 116.0 15.8 62 216-277 107-172 (500)
326 3bt7_A TRNA (uracil-5-)-methyl 98.9 5.9E-09 2E-13 113.1 13.2 110 616-736 201-327 (369)
327 3fut_A Dimethyladenosine trans 98.9 5E-09 1.7E-13 107.4 11.9 109 616-734 34-144 (271)
328 4ap3_A Steroid monooxygenase; 98.9 2.6E-09 8.8E-14 122.1 10.7 39 2-40 23-61 (549)
329 4at0_A 3-ketosteroid-delta4-5a 98.9 1.4E-08 4.9E-13 115.5 16.7 58 213-270 200-263 (510)
330 3tqs_A Ribosomal RNA small sub 98.9 3.3E-09 1.1E-13 108.0 9.9 86 616-706 16-106 (255)
331 2xdo_A TETX2 protein; tetracyc 98.9 1.2E-08 4E-13 112.5 14.9 53 216-270 129-181 (398)
332 3axs_A Probable N(2),N(2)-dime 98.9 2.3E-09 7.9E-14 115.5 8.8 102 628-735 51-158 (392)
333 2dul_A N(2),N(2)-dimethylguano 98.9 5.8E-09 2E-13 112.6 11.8 100 629-735 47-164 (378)
334 2qfm_A Spermine synthase; sper 98.9 2.3E-09 8E-14 112.6 8.5 111 628-738 187-317 (364)
335 3ihg_A RDME; flavoenzyme, anth 98.9 5.8E-09 2E-13 119.7 12.1 61 216-276 121-189 (535)
336 3i3l_A Alkylhalidase CMLS; fla 98.9 2.4E-08 8.1E-13 114.9 17.0 56 216-271 129-188 (591)
337 1k0i_A P-hydroxybenzoate hydro 98.9 9.6E-09 3.3E-13 113.1 12.9 55 216-270 104-162 (394)
338 3fmw_A Oxygenase; mithramycin, 98.9 6.4E-09 2.2E-13 119.4 11.4 62 216-277 149-214 (570)
339 3b5i_A S-adenosyl-L-methionine 98.8 1.2E-07 3.9E-12 101.3 20.0 172 616-788 34-299 (374)
340 1m6y_A S-adenosyl-methyltransf 98.8 4.2E-09 1.4E-13 109.7 8.6 86 618-705 15-107 (301)
341 3c96_A Flavin-containing monoo 98.8 1.2E-08 4E-13 113.0 12.4 61 1-77 5-66 (410)
342 3e1t_A Halogenase; flavoprotei 98.8 1.8E-08 6.2E-13 114.8 13.4 55 216-270 112-171 (512)
343 2qcu_A Aerobic glycerol-3-phos 98.8 3.8E-08 1.3E-12 111.7 15.9 58 214-271 148-210 (501)
344 4a9w_A Monooxygenase; baeyer-v 98.8 1.1E-08 3.7E-13 110.9 10.7 54 216-270 77-131 (357)
345 1d4d_A Flavocytochrome C fumar 98.8 1.4E-08 4.7E-13 117.1 12.1 57 214-270 254-316 (572)
346 3ua3_A Protein arginine N-meth 98.8 1.2E-08 4.2E-13 114.6 10.6 102 630-732 410-531 (745)
347 3f8d_A Thioredoxin reductase ( 98.8 1.2E-08 4.2E-13 108.7 10.1 53 217-270 72-124 (323)
348 1rp0_A ARA6, thiazole biosynth 98.8 2.6E-08 8.7E-13 104.1 12.0 38 2-39 41-79 (284)
349 1w4x_A Phenylacetone monooxyge 98.8 1.5E-08 5.2E-13 116.2 11.0 38 2-39 18-55 (542)
350 2rgh_A Alpha-glycerophosphate 98.8 6.2E-08 2.1E-12 111.4 15.9 58 214-271 187-250 (571)
351 3lzw_A Ferredoxin--NADP reduct 98.8 1.1E-08 3.7E-13 109.7 8.9 53 216-269 68-121 (332)
352 2zbw_A Thioredoxin reductase; 98.8 1.5E-08 5.1E-13 108.8 9.9 53 217-269 67-119 (335)
353 2bry_A NEDD9 interacting prote 98.8 2.6E-08 8.8E-13 112.7 12.0 55 216-270 167-229 (497)
354 3oc4_A Oxidoreductase, pyridin 98.8 2E-08 6.7E-13 112.6 11.0 55 214-269 188-242 (452)
355 3cvo_A Methyltransferase-like 98.8 3.5E-08 1.2E-12 95.5 11.1 99 629-736 30-155 (202)
356 3uox_A Otemo; baeyer-villiger 98.8 6.7E-09 2.3E-13 118.6 7.1 38 2-39 11-48 (545)
357 3o0h_A Glutathione reductase; 98.7 3.2E-08 1.1E-12 111.9 12.5 55 215-269 232-286 (484)
358 2ar0_A M.ecoki, type I restric 98.7 2.8E-08 9.6E-13 112.7 11.5 148 581-736 126-313 (541)
359 2aqj_A Tryptophan halogenase, 98.7 1.2E-07 4.1E-12 108.7 16.3 55 215-270 165-221 (538)
360 3lxd_A FAD-dependent pyridine 98.7 7E-08 2.4E-12 106.9 13.8 56 214-269 193-249 (415)
361 3ab1_A Ferredoxin--NADP reduct 98.7 2.3E-08 7.9E-13 108.5 9.7 52 218-269 77-129 (360)
362 3iwa_A FAD-dependent pyridine 98.7 6.3E-08 2.2E-12 109.1 13.6 56 214-269 201-256 (472)
363 2gv8_A Monooxygenase; FMO, FAD 98.7 3.3E-08 1.1E-12 110.7 11.0 40 1-40 7-48 (447)
364 4dna_A Probable glutathione re 98.7 5.2E-08 1.8E-12 109.5 12.6 55 214-269 210-266 (463)
365 3v97_A Ribosomal RNA large sub 98.7 5.5E-08 1.9E-12 113.7 13.1 118 618-735 179-347 (703)
366 2oyr_A UPF0341 protein YHIQ; a 98.7 5.5E-09 1.9E-13 106.0 4.1 105 619-727 76-192 (258)
367 3fg2_P Putative rubredoxin red 98.7 2E-08 6.7E-13 110.9 8.9 56 214-269 183-239 (404)
368 3c4n_A Uncharacterized protein 98.7 3.9E-09 1.3E-13 116.6 3.1 57 214-271 171-236 (405)
369 3uzu_A Ribosomal RNA small sub 98.7 2.8E-08 9.6E-13 102.4 9.2 86 616-707 29-125 (279)
370 2wdq_A Succinate dehydrogenase 98.7 1.6E-07 5.3E-12 108.3 16.2 57 215-271 143-206 (588)
371 1xdi_A RV3303C-LPDA; reductase 98.7 8.6E-08 2.9E-12 108.8 13.6 56 215-270 223-278 (499)
372 3d1c_A Flavin-containing putat 98.7 5.8E-08 2E-12 105.7 11.7 54 216-270 89-142 (369)
373 3ll7_A Putative methyltransfer 98.7 2E-08 6.7E-13 108.4 7.7 77 628-706 92-173 (410)
374 3atr_A Conserved archaeal prot 98.7 6.9E-08 2.4E-12 108.2 12.5 56 216-271 101-162 (453)
375 3ftd_A Dimethyladenosine trans 98.7 6.6E-08 2.3E-12 98.2 10.7 85 616-706 18-105 (249)
376 3itj_A Thioredoxin reductase 1 98.7 6.4E-08 2.2E-12 103.9 11.3 51 218-269 87-140 (338)
377 1mo9_A ORF3; nucleotide bindin 98.7 1.6E-07 5.4E-12 107.2 14.7 55 215-269 255-314 (523)
378 2h88_A Succinate dehydrogenase 98.7 2.2E-07 7.6E-12 107.1 15.9 57 215-271 155-217 (621)
379 2bs2_A Quinol-fumarate reducta 98.6 1.2E-07 4E-12 110.2 13.4 57 215-271 158-220 (660)
380 2r0c_A REBC; flavin adenine di 98.6 1.2E-07 3.9E-12 108.9 13.2 60 2-77 28-87 (549)
381 3khk_A Type I restriction-modi 98.6 3.8E-08 1.3E-12 111.3 8.9 119 616-735 232-395 (544)
382 1ges_A Glutathione reductase; 98.6 1.3E-07 4.6E-12 105.6 13.4 55 215-269 208-263 (450)
383 2e4g_A Tryptophan halogenase; 98.6 3.1E-07 1E-11 105.5 16.2 55 215-270 194-251 (550)
384 2weu_A Tryptophan 5-halogenase 98.6 5.2E-07 1.8E-11 102.8 18.0 55 215-270 173-229 (511)
385 2yqu_A 2-oxoglutarate dehydrog 98.6 1.7E-07 6E-12 105.0 13.8 57 214-270 207-263 (455)
386 2pyx_A Tryptophan halogenase; 98.6 4.5E-07 1.5E-11 103.6 17.2 55 215-270 175-232 (526)
387 3jsk_A Cypbp37 protein; octame 98.6 1.4E-07 4.9E-12 99.3 11.8 39 1-39 80-120 (344)
388 2gmh_A Electron transfer flavo 98.6 2.7E-07 9.3E-12 106.4 14.7 55 216-270 145-216 (584)
389 2q0l_A TRXR, thioredoxin reduc 98.6 1.5E-07 5.1E-12 99.7 11.6 48 221-269 65-112 (311)
390 2xve_A Flavin-containing monoo 98.6 1.3E-07 4.5E-12 106.0 11.6 40 1-40 3-48 (464)
391 2ywl_A Thioredoxin reductase r 98.6 3.9E-07 1.3E-11 88.0 13.0 52 217-270 58-109 (180)
392 2qae_A Lipoamide, dihydrolipoy 98.6 1.7E-07 5.9E-12 105.5 11.7 55 215-269 215-274 (468)
393 3ics_A Coenzyme A-disulfide re 98.6 8.6E-08 2.9E-12 111.3 9.4 54 214-269 227-280 (588)
394 2gjc_A Thiazole biosynthetic e 98.6 2.8E-07 9.4E-12 96.6 12.1 38 2-39 67-106 (326)
395 1qyr_A KSGA, high level kasuga 98.6 3.4E-08 1.2E-12 100.4 5.0 85 616-706 8-100 (252)
396 4fk1_A Putative thioredoxin re 98.6 1.7E-07 5.8E-12 99.0 10.6 35 2-37 8-42 (304)
397 2cul_A Glucose-inhibited divis 98.5 3.6E-07 1.2E-11 92.2 12.0 54 216-270 69-124 (232)
398 1vdc_A NTR, NADPH dependent th 98.5 1.6E-07 5.3E-12 100.7 9.8 51 218-270 73-123 (333)
399 3fbs_A Oxidoreductase; structu 98.5 1.8E-07 6.3E-12 98.2 10.2 49 220-269 61-110 (297)
400 2q7v_A Thioredoxin reductase; 98.5 2.3E-07 8E-12 99.0 11.1 37 2-39 10-46 (325)
401 2v3a_A Rubredoxin reductase; a 98.5 2E-07 6.9E-12 102.0 10.6 56 215-270 187-242 (384)
402 1fec_A Trypanothione reductase 98.5 3.1E-07 1.1E-11 103.8 12.2 55 215-269 231-286 (490)
403 2r9z_A Glutathione amide reduc 98.5 2E-07 6.9E-12 104.6 10.6 55 215-269 207-262 (463)
404 3h8l_A NADH oxidase; membrane 98.5 3.6E-07 1.2E-11 100.9 12.4 51 215-269 218-268 (409)
405 2efj_A 3,7-dimethylxanthine me 98.5 1.5E-06 5.1E-11 92.7 16.2 155 630-788 53-293 (384)
406 3lkd_A Type I restriction-modi 98.5 3.4E-07 1.2E-11 103.2 11.8 120 617-736 205-359 (542)
407 3lad_A Dihydrolipoamide dehydr 98.5 1.9E-07 6.5E-12 105.4 9.9 56 214-269 220-278 (476)
408 2hqm_A GR, grase, glutathione 98.5 6.6E-07 2.2E-11 100.9 14.2 55 215-269 226-283 (479)
409 2wpf_A Trypanothione reductase 98.5 2.3E-07 7.8E-12 105.0 10.4 55 215-269 235-290 (495)
410 3ef6_A Toluene 1,2-dioxygenase 98.5 2.8E-07 9.6E-12 101.7 10.9 56 215-270 185-240 (410)
411 3cty_A Thioredoxin reductase; 98.5 4.1E-07 1.4E-11 96.8 11.8 37 2-39 18-54 (319)
412 2dkh_A 3-hydroxybenzoate hydro 98.5 3.1E-07 1.1E-11 107.3 11.6 60 2-77 34-94 (639)
413 1zmd_A Dihydrolipoyl dehydroge 98.5 3.9E-07 1.3E-11 102.8 12.0 55 215-269 220-280 (474)
414 2zxi_A TRNA uridine 5-carboxym 98.5 5.6E-07 1.9E-11 102.2 13.0 55 215-270 123-179 (637)
415 1dxl_A Dihydrolipoamide dehydr 98.5 4.5E-07 1.5E-11 102.1 12.3 55 215-269 218-277 (470)
416 2e5v_A L-aspartate oxidase; ar 98.5 5.9E-07 2E-11 100.8 13.0 55 215-271 119-176 (472)
417 3urh_A Dihydrolipoyl dehydroge 98.5 2.3E-07 7.8E-12 105.1 9.5 56 214-269 238-298 (491)
418 3o4f_A Spermidine synthase; am 98.5 4.6E-07 1.6E-11 92.7 10.7 110 628-737 82-200 (294)
419 3ntd_A FAD-dependent pyridine 98.5 2.8E-07 9.6E-12 106.5 10.4 55 215-269 192-265 (565)
420 1onf_A GR, grase, glutathione 98.5 1E-06 3.5E-11 99.8 14.6 55 215-269 217-273 (500)
421 1kf6_A Fumarate reductase flav 98.5 1.2E-06 4.2E-11 101.1 15.4 57 215-271 134-197 (602)
422 1chu_A Protein (L-aspartate ox 98.5 6.4E-07 2.2E-11 102.1 12.8 36 2-38 10-45 (540)
423 1zk7_A HGII, reductase, mercur 98.5 7.8E-07 2.7E-11 100.0 13.2 55 215-270 216-270 (467)
424 1fl2_A Alkyl hydroperoxide red 98.5 5.3E-07 1.8E-11 95.4 11.0 50 221-270 62-114 (310)
425 3ces_A MNMG, tRNA uridine 5-ca 98.4 6.5E-07 2.2E-11 102.1 12.0 54 216-270 125-180 (651)
426 3evf_A RNA-directed RNA polyme 98.4 3.2E-07 1.1E-11 91.6 8.2 118 616-737 61-186 (277)
427 2a8x_A Dihydrolipoyl dehydroge 98.4 9.6E-07 3.3E-11 99.2 13.2 55 215-269 212-269 (464)
428 1y56_A Hypothetical protein PH 98.4 5.1E-07 1.8E-11 102.0 10.7 48 223-270 265-312 (493)
429 2cdu_A NADPH oxidase; flavoenz 98.4 3.6E-07 1.2E-11 102.3 8.5 56 214-269 190-245 (452)
430 3s5w_A L-ornithine 5-monooxyge 98.4 5.8E-07 2E-11 101.1 10.2 36 2-37 32-72 (463)
431 1trb_A Thioredoxin reductase; 98.4 4.6E-07 1.6E-11 96.3 8.9 45 223-269 70-114 (320)
432 1q1r_A Putidaredoxin reductase 98.4 8.7E-07 3E-11 98.4 11.1 55 215-269 191-248 (431)
433 3cp8_A TRNA uridine 5-carboxym 98.4 1.4E-06 4.9E-11 99.2 12.6 54 216-270 118-173 (641)
434 2qy6_A UPF0209 protein YFCK; s 98.4 8.6E-07 3E-11 90.0 9.7 107 627-733 58-211 (257)
435 4fzv_A Putative methyltransfer 98.4 1.4E-06 4.9E-11 92.5 11.8 121 621-741 140-290 (359)
436 1hyu_A AHPF, alkyl hydroperoxi 98.4 7.4E-07 2.5E-11 101.4 9.8 51 220-270 272-325 (521)
437 2a87_A TRXR, TR, thioredoxin r 98.4 5.5E-07 1.9E-11 96.5 8.3 37 1-38 15-51 (335)
438 1jnr_A Adenylylsulfate reducta 98.4 5.9E-06 2E-10 96.3 17.3 55 216-270 152-217 (643)
439 3dk9_A Grase, GR, glutathione 98.3 2.9E-06 1E-10 95.6 14.4 56 214-269 227-291 (478)
440 3fpz_A Thiazole biosynthetic e 98.3 2.1E-07 7.1E-12 99.4 4.6 40 1-40 66-107 (326)
441 3klj_A NAD(FAD)-dependent dehy 98.3 8.9E-07 3E-11 96.5 9.4 41 227-269 74-114 (385)
442 3vrd_B FCCB subunit, flavocyto 98.3 7.4E-07 2.5E-11 98.2 8.7 47 222-268 209-255 (401)
443 1m6e_X S-adenosyl-L-methionnin 98.3 1.2E-06 4E-11 92.8 8.6 158 629-787 51-280 (359)
444 3ic9_A Dihydrolipoamide dehydr 98.3 2.6E-06 8.9E-11 96.2 11.9 54 215-269 215-272 (492)
445 3dgh_A TRXR-1, thioredoxin red 98.3 9.3E-07 3.2E-11 99.8 8.1 56 214-269 226-287 (483)
446 1wg8_A Predicted S-adenosylmet 98.3 1.6E-06 5.6E-11 87.2 8.4 82 618-705 11-98 (285)
447 3s1s_A Restriction endonucleas 98.2 3.2E-06 1.1E-10 96.7 11.0 109 628-736 320-466 (878)
448 3gcz_A Polyprotein; flavivirus 98.2 3.7E-07 1.3E-11 91.3 3.0 117 616-737 77-203 (282)
449 1pn0_A Phenol 2-monooxygenase; 98.2 1.6E-06 5.3E-11 101.5 8.8 60 2-77 10-74 (665)
450 3kd9_A Coenzyme A disulfide re 98.2 4.4E-06 1.5E-10 93.3 11.1 53 215-269 190-242 (449)
451 2wk1_A NOVP; transferase, O-me 98.2 4.7E-06 1.6E-10 85.3 10.0 120 613-736 89-245 (282)
452 1nhp_A NADH peroxidase; oxidor 98.2 3.3E-06 1.1E-10 94.3 9.1 36 1-36 1-38 (447)
453 3gyx_A Adenylylsulfate reducta 98.2 4E-06 1.4E-10 97.3 9.9 56 215-270 166-232 (662)
454 3c6k_A Spermine synthase; sper 98.1 3.2E-06 1.1E-10 89.1 8.0 109 628-736 204-332 (381)
455 3cgb_A Pyridine nucleotide-dis 98.1 3.9E-06 1.3E-10 94.5 9.2 41 229-269 107-150 (480)
456 4b1b_A TRXR, thioredoxin reduc 98.1 1.7E-05 6E-10 89.8 13.9 55 214-268 262-316 (542)
457 3g3e_A D-amino-acid oxidase; F 98.1 1.1E-06 3.7E-11 94.9 3.4 179 214-419 141-333 (351)
458 4gcm_A TRXR, thioredoxin reduc 98.1 2E-06 6.9E-11 91.0 5.0 38 2-40 8-45 (312)
459 4eqs_A Coenzyme A disulfide re 98.1 1.1E-05 3.8E-10 89.5 10.9 50 215-268 188-237 (437)
460 2k4m_A TR8_protein, UPF0146 pr 98.0 1.2E-05 4E-10 71.7 8.2 97 617-738 25-124 (153)
461 3sx6_A Sulfide-quinone reducta 98.0 1.2E-05 4E-10 89.5 10.1 33 1-33 5-40 (437)
462 2bc0_A NADH oxidase; flavoprot 98.0 4.9E-06 1.7E-10 94.0 6.9 36 1-36 36-74 (490)
463 1c0p_A D-amino acid oxidase; a 98.0 4E-06 1.4E-10 90.9 5.8 37 1-37 7-43 (363)
464 2vdc_G Glutamate synthase [NAD 98.0 3E-06 1E-10 94.3 4.7 39 1-39 123-161 (456)
465 3ufb_A Type I restriction-modi 98.0 3.7E-05 1.3E-09 86.7 13.3 121 615-736 203-363 (530)
466 4a5l_A Thioredoxin reductase; 98.0 3.4E-06 1.2E-10 89.2 4.6 32 2-33 6-37 (314)
467 4b63_A L-ornithine N5 monooxyg 98.0 9.4E-06 3.2E-10 91.7 8.4 36 2-37 41-76 (501)
468 2eq6_A Pyruvate dehydrogenase 97.9 3.9E-05 1.3E-09 85.9 12.2 48 222-269 217-269 (464)
469 3lkz_A Non-structural protein 97.9 2.3E-05 7.7E-10 78.1 8.6 119 616-738 81-207 (321)
470 3c4a_A Probable tryptophan hyd 97.9 5.7E-06 1.9E-10 90.3 4.8 35 1-35 1-37 (381)
471 3p8z_A Mtase, non-structural p 97.9 8.2E-06 2.8E-10 78.4 4.7 117 616-737 65-188 (267)
472 3r9u_A Thioredoxin reductase; 97.9 4.8E-06 1.6E-10 88.0 3.1 40 1-41 5-45 (315)
473 3k30_A Histamine dehydrogenase 97.8 8.7E-06 3E-10 95.9 4.8 41 1-41 392-432 (690)
474 3l8k_A Dihydrolipoyl dehydroge 97.8 7.9E-06 2.7E-10 91.7 3.9 39 2-40 6-44 (466)
475 1o94_A Tmadh, trimethylamine d 97.8 1.3E-05 4.6E-10 94.8 5.4 41 1-41 390-430 (729)
476 3ihm_A Styrene monooxygenase A 97.8 1.2E-05 4E-10 89.3 4.6 33 1-33 23-55 (430)
477 1v59_A Dihydrolipoamide dehydr 97.8 8.1E-05 2.8E-09 83.7 11.7 35 1-35 184-218 (478)
478 2gqw_A Ferredoxin reductase; f 97.8 0.00019 6.4E-09 78.8 14.1 45 221-269 193-237 (408)
479 3eld_A Methyltransferase; flav 97.8 1.8E-05 6.3E-10 79.6 5.2 118 616-737 68-193 (300)
480 1nhp_A NADH peroxidase; oxidor 97.8 0.00011 3.8E-09 81.8 12.1 35 1-35 150-184 (447)
481 3g5s_A Methylenetetrahydrofola 97.8 2.2E-05 7.4E-10 83.0 5.7 40 1-40 2-41 (443)
482 1ebd_A E3BD, dihydrolipoamide 97.8 0.00011 3.7E-09 82.1 12.0 48 222-269 218-268 (455)
483 4auk_A Ribosomal RNA large sub 97.7 8.6E-05 2.9E-09 77.9 9.7 87 627-728 209-296 (375)
484 1v59_A Dihydrolipoamide dehydr 97.7 1.3E-05 4.4E-10 90.3 3.7 39 1-39 6-44 (478)
485 1ojt_A Surface protein; redox- 97.7 1.5E-05 5.2E-10 89.8 3.7 39 1-39 7-45 (482)
486 2px2_A Genome polyprotein [con 97.7 0.0001 3.6E-09 72.2 8.6 112 616-737 60-185 (269)
487 1ojt_A Surface protein; redox- 97.7 0.00014 4.6E-09 81.9 10.8 49 221-269 232-284 (482)
488 2zig_A TTHA0409, putative modi 97.6 0.00014 4.7E-09 76.0 9.8 59 616-676 223-281 (297)
489 1lvl_A Dihydrolipoamide dehydr 97.6 0.00012 4E-09 81.9 9.9 34 1-34 172-205 (458)
490 1lvl_A Dihydrolipoamide dehydr 97.6 2E-05 6.7E-10 88.2 3.5 53 215-269 212-266 (458)
491 1ebd_A E3BD, dihydrolipoamide 97.6 2.6E-05 8.9E-10 87.2 4.3 38 1-39 4-41 (455)
492 1ps9_A 2,4-dienoyl-COA reducta 97.6 3.7E-05 1.3E-09 90.3 5.8 40 1-40 374-413 (671)
493 3dgz_A Thioredoxin reductase 2 97.6 3E-05 1E-09 87.5 4.8 55 215-269 225-285 (488)
494 1gte_A Dihydropyrimidine dehyd 97.6 3.6E-05 1.2E-09 94.5 5.6 39 1-39 188-227 (1025)
495 1m6i_A Programmed cell death p 97.6 0.00033 1.1E-08 78.9 13.1 49 221-269 232-280 (493)
496 3qfa_A Thioredoxin reductase 1 97.6 3.7E-05 1.3E-09 87.4 4.8 38 2-39 34-79 (519)
497 2eq6_A Pyruvate dehydrogenase 97.5 3.3E-05 1.1E-09 86.5 3.7 38 1-39 7-44 (464)
498 3pl8_A Pyranose 2-oxidase; sub 97.5 5.2E-05 1.8E-09 87.7 5.4 38 2-39 48-85 (623)
499 2bc0_A NADH oxidase; flavoprot 97.5 0.00058 2E-08 76.9 13.9 34 1-34 195-228 (490)
500 3h28_A Sulfide-quinone reducta 97.5 4.1E-05 1.4E-09 84.9 4.1 53 214-268 199-253 (430)
No 1
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=100.00 E-value=4.6e-45 Score=389.82 Aligned_cols=270 Identities=31% Similarity=0.492 Sum_probs=250.2
Q ss_pred chHHhhhhhhhhhcCChHHHHhccCCCCcccccccCCCcccHHHHHHHHHHHHHHHcCCCCCCeEEEeccCchHHHHHHH
Q 035870 569 TLTQARRNISRHYDLSNELFSLFLDESMTYSCAVFKSEDEDLKAAQMRKVSLLIEKARVSKGQEVLEIGCGWGTLAIEIV 648 (842)
Q Consensus 569 ~~~~~~~~i~~~Yd~~~~~~~~~l~~~~~ys~~~~~~~~~~l~~aq~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~la 648 (842)
..+..+++|++|||..++||+.|+++.|+|+|++|..+..+++++|.++++.+++.+.++++.+|||||||+|.++..++
T Consensus 12 ~~~~~~~~i~~~Yd~~~~~y~~~l~~~~~y~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la 91 (302)
T 3hem_A 12 QLKPPVEAVRSHYDKSNEFFKLWLDPSMTYSCAYFERPDMTLEEAQYAKRKLALDKLNLEPGMTLLDIGCGWGSTMRHAV 91 (302)
T ss_dssp CCCCCHHHHHHHHTSCHHHHHHHSCTTCCCSCCCCSSTTCCHHHHHHHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHH
T ss_pred cccchHHHHHHhcCCCHHHHHHhcCCCCceeeEEecCCCCCHHHHHHHHHHHHHHHcCCCCcCEEEEeeccCcHHHHHHH
Confidence 34566899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCccCCCccEEEEcchhhhc-------ChhhHHHHHHHH
Q 035870 649 KRTGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLAKANKYDRIISCEMIEAV-------GHEFMEEFFGCC 721 (842)
Q Consensus 649 ~~~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~~~fD~i~s~~~~~~~-------~~~~~~~~~~~~ 721 (842)
+..+++|+|+|+|+++++.|++++...+++++++++++|+.++ +++||+|+++.+++|+ +.+++..+++++
T Consensus 92 ~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~ 169 (302)
T 3hem_A 92 AEYDVNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEF--DEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKF 169 (302)
T ss_dssp HHHCCEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGC--CCCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHH
T ss_pred HhCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHc--CCCccEEEEcchHHhcCccccccchhHHHHHHHHH
Confidence 9867999999999999999999999999988999999999988 4899999999999999 556789999999
Q ss_pred HhccccCcEEEEEeecCCCcccccccCc---------cchhhhcccCCCCCCCHHHHHHHHhhcCCcEEEEEEecCccHH
Q 035870 722 ESLLAEDGLLVLQFISIPDERYNEYRLS---------SDFIKEYIFPGGCLPSLSRITSAMSVASRLCVEQVENIGIHYY 792 (842)
Q Consensus 722 ~~~LkpgG~~~~~~~~~~~~~~~~~~~~---------~~~~~~~i~p~~~~~~~~~~~~~~~~~~gf~v~~~~~~~~~y~ 792 (842)
.++|||||+++++++..+.......... ..|+.+|+||++.+|+.+++.+.+++ +||+++++++++.||.
T Consensus 170 ~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~s~~~~~~~l~~-aGf~~~~~~~~~~~y~ 248 (302)
T 3hem_A 170 YNLTPDDGRMLLHTITIPDKEEAQELGLTSPMSLLRFIKFILTEIFPGGRLPRISQVDYYSSN-AGWKVERYHRIGANYV 248 (302)
T ss_dssp HHSSCTTCEEEEEEEECCCHHHHHHHTCCCCHHHHHHHHHHHHHTCTTCCCCCHHHHHHHHHH-HTCEEEEEEECGGGHH
T ss_pred HHhcCCCcEEEEEEEeccCccchhhccccccccccchHHHHHHhcCCCCCCCCHHHHHHHHHh-CCcEEEEEEeCchhHH
Confidence 9999999999999998776543222222 27899999999999999999998887 8999999999999999
Q ss_pred HHHHHHHHHHHHhHHHHHhccCCHHHHHHHHHHHHHHHHhcccCcccccC
Q 035870 793 QTLRCWRKNFMEKQSKILALGFNDKFIRTWEYYFDYCAAGFKSYTLGNYQ 842 (842)
Q Consensus 793 ~tl~~w~~~~~~~~~~~~~~g~~~~~~r~w~~y~~~~~~~f~~~~~~~~q 842 (842)
+|+..|.++|.++++++.++ |+++|.|+|++||++|+++|+.|.|+++|
T Consensus 249 ~tl~~w~~~~~~~~~~~~~~-~~~~~~~~w~~yl~~~~~~f~~~~~~~~q 297 (302)
T 3hem_A 249 PTLNAWADALQAHKDEAIAL-KGQETCDIYMHYLRGCSDLFRDKYTDVCQ 297 (302)
T ss_dssp HHHHHHHHHHHHTHHHHHHH-HCHHHHHHHHHHHHHHHHHHHTTSSEEEE
T ss_pred HHHHHHHHHHHHhHHHHHHH-hCHHHHHHHHHHHHHHHHHHhCCCCeEEE
Confidence 99999999999999999998 89999999999999999999999999998
No 2
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=100.00 E-value=2.1e-41 Score=359.04 Aligned_cols=271 Identities=31% Similarity=0.541 Sum_probs=246.5
Q ss_pred CchHHhhhhhhhhhcCChHHHHhccCCCCcccccccCCCcccHHHHHHHHHHHHHHHcCCCCCCeEEEeccCchHHHHHH
Q 035870 568 NTLTQARRNISRHYDLSNELFSLFLDESMTYSCAVFKSEDEDLKAAQMRKVSLLIEKARVSKGQEVLEIGCGWGTLAIEI 647 (842)
Q Consensus 568 ~~~~~~~~~i~~~Yd~~~~~~~~~l~~~~~ys~~~~~~~~~~l~~aq~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l 647 (842)
++.+.++++|+.|||..++||+.|+++.|+|++++|..+..++.++|.++++.+++.+.++++.+|||||||+|.++..+
T Consensus 3 ~~~~~~~~~i~~~Yd~~~~~~~~~~~~~~~y~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l 82 (287)
T 1kpg_A 3 DELKPHFANVQAHYDLSDDFFRLFLDPTQTYSCAYFERDDMTLQEAQIAKIDLALGKLGLQPGMTLLDVGCGWGATMMRA 82 (287)
T ss_dssp CCSCCCHHHHHHHHTSCHHHHTTTSCTTCCCSCCCCSSTTCCHHHHHHHHHHHHHTTTTCCTTCEEEEETCTTSHHHHHH
T ss_pred CcccccHHHHHHhcCCCHHHHHHhcCCCCCcceEEecCCCCCHHHHHHHHHHHHHHHcCCCCcCEEEEECCcccHHHHHH
Confidence 34566789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCccCCCccEEEEcchhhhcChhhHHHHHHHHHhcccc
Q 035870 648 VKRTGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLAKANKYDRIISCEMIEAVGHEFMEEFFGCCESLLAE 727 (842)
Q Consensus 648 a~~~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~~~fD~i~s~~~~~~~~~~~~~~~~~~~~~~Lkp 727 (842)
++..+++|+|+|+|+++++.|++++...++.++++++++|+.+++ ++||+|++..+++|++++++..++++++++|||
T Consensus 83 ~~~~~~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~--~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~Lkp 160 (287)
T 1kpg_A 83 VEKYDVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFD--EPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPA 160 (287)
T ss_dssp HHHHCCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGCC--CCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCT
T ss_pred HHHcCCEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhCC--CCeeEEEEeCchhhcChHHHHHHHHHHHHhcCC
Confidence 976688999999999999999999999888889999999999887 899999999999999877799999999999999
Q ss_pred CcEEEEEeecCCCcccc---------cccCccchhhhcccCCCCCCCHHHHHHHHhhcCCcEEEEEEecCccHHHHHHHH
Q 035870 728 DGLLVLQFISIPDERYN---------EYRLSSDFIKEYIFPGGCLPSLSRITSAMSVASRLCVEQVENIGIHYYQTLRCW 798 (842)
Q Consensus 728 gG~~~~~~~~~~~~~~~---------~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~gf~v~~~~~~~~~y~~tl~~w 798 (842)
||+++++++..+..... .......|+.++++|++.+|+.+++.+.+.+ +||++++++.++.||.+|+..|
T Consensus 161 gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~-aGf~~~~~~~~~~~y~~~~~~w 239 (287)
T 1kpg_A 161 DGVMLLHTITGLHPKEIHERGLPMSFTFARFLKFIVTEIFPGGRLPSIPMVQECASA-NGFTVTRVQSLQPHYAKTLDLW 239 (287)
T ss_dssp TCEEEEEEEEECCHHHHTTTTCSCHHHHHHHHHHHHHHTSTTCCCCCHHHHHHHHHT-TTCEEEEEEECHHHHHHHHHHH
T ss_pred CCEEEEEEecCCCccccccccccccccccchhhhHHheeCCCCCCCCHHHHHHHHHh-CCcEEEEEEeCcHhHHHHHHHH
Confidence 99999998876553320 0112345788899999999999999988887 8999999999999999999999
Q ss_pred HHHHHHhHHHHHhccCCHHHHHHHHHHHHHHHHhcccCcccccC
Q 035870 799 RKNFMEKQSKILALGFNDKFIRTWEYYFDYCAAGFKSYTLGNYQ 842 (842)
Q Consensus 799 ~~~~~~~~~~~~~~g~~~~~~r~w~~y~~~~~~~f~~~~~~~~q 842 (842)
.++|.++++++.+. +++.+.|+|++||++|+++|+.|.++++|
T Consensus 240 ~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~f~~g~~~~~~ 282 (287)
T 1kpg_A 240 SAALQANKGQAIAL-QSEEVYERYMKYLTGCAEMFRIGYIDVNQ 282 (287)
T ss_dssp HHHHHHTHHHHHHH-SCHHHHHHHHHHHHHHHHHHHTTSEEEEE
T ss_pred HHHHHHHHHHHHHh-cChHHHHHHHHHHHHHHHHHhCCCCeEEE
Confidence 99999999999988 56777888999999999999999999887
No 3
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=100.00 E-value=1.3e-39 Score=350.44 Aligned_cols=273 Identities=29% Similarity=0.464 Sum_probs=241.5
Q ss_pred ccCchHHhhhhhhhhhcCChHHHHhccCCCCcccccccCCCcccHHHHHHHHHHHHHHHcCCCCCCeEEEeccCchHHHH
Q 035870 566 RQNTLTQARRNISRHYDLSNELFSLFLDESMTYSCAVFKSEDEDLKAAQMRKVSLLIEKARVSKGQEVLEIGCGWGTLAI 645 (842)
Q Consensus 566 ~~~~~~~~~~~i~~~Yd~~~~~~~~~l~~~~~ys~~~~~~~~~~l~~aq~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~ 645 (842)
++|+.+.+.++|++|||..++||+.++++.++|++++|..+..++.++|.++++.+++.+.++++.+|||||||+|.++.
T Consensus 27 ~~~~~~~~~~~i~~~Yd~~~~~~~~~~~~~~~y~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~ 106 (318)
T 2fk8_A 27 SPTKTRTRFEDIQAHYDVSDDFFALFQDPTRTYSCAYFEPPELTLEEAQYAKVDLNLDKLDLKPGMTLLDIGCGWGTTMR 106 (318)
T ss_dssp -----------CGGGGCCCHHHHTTTSCTTCCCSCCCCSSTTCCHHHHHHHHHHHHHTTSCCCTTCEEEEESCTTSHHHH
T ss_pred ccCChhhhHHHHHHhcCCCHHHHHHHcCCCCCcceeeeCCCCCCHHHHHHHHHHHHHHhcCCCCcCEEEEEcccchHHHH
Confidence 78899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCccCCCccEEEEcchhhhcChhhHHHHHHHHHhcc
Q 035870 646 EIVKRTGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLAKANKYDRIISCEMIEAVGHEFMEEFFGCCESLL 725 (842)
Q Consensus 646 ~la~~~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~~~fD~i~s~~~~~~~~~~~~~~~~~~~~~~L 725 (842)
.+++..+++|+|+|+|+++++.|++++...++.++++++++|+.+++ ++||+|+++.+++|++.+++..+++++.++|
T Consensus 107 ~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L 184 (318)
T 2fk8_A 107 RAVERFDVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDFA--EPVDRIVSIEAFEHFGHENYDDFFKRCFNIM 184 (318)
T ss_dssp HHHHHHCCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGCC--CCCSEEEEESCGGGTCGGGHHHHHHHHHHHS
T ss_pred HHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHCC--CCcCEEEEeChHHhcCHHHHHHHHHHHHHhc
Confidence 99988788999999999999999999999898878999999999886 7899999999999998777999999999999
Q ss_pred ccCcEEEEEeecCCCcccccc---------cCccchhhhcccCCCCCCCHHHHHHHHhhcCCcEEEEEEecCccHHHHHH
Q 035870 726 AEDGLLVLQFISIPDERYNEY---------RLSSDFIKEYIFPGGCLPSLSRITSAMSVASRLCVEQVENIGIHYYQTLR 796 (842)
Q Consensus 726 kpgG~~~~~~~~~~~~~~~~~---------~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~gf~v~~~~~~~~~y~~tl~ 796 (842)
||||++++.++..+....... .....|+.++++|++.+|+.+++.+.+++ +||+++++++++.+|.+++.
T Consensus 185 kpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~-aGf~~~~~~~~~~~y~~~~~ 263 (318)
T 2fk8_A 185 PADGRMTVQSSVSYHPYEMAARGKKLSFETARFIKFIVTEIFPGGRLPSTEMMVEHGEK-AGFTVPEPLSLRPHYIKTLR 263 (318)
T ss_dssp CTTCEEEEEEEECCCHHHHHTTCHHHHHHHHHHHHHHHHHTSTTCCCCCHHHHHHHHHH-TTCBCCCCEECHHHHHHHHH
T ss_pred CCCcEEEEEEeccCCchhhhhccccccccccchhhHHHHhcCCCCcCCCHHHHHHHHHh-CCCEEEEEEecchhHHHHHH
Confidence 999999999988765332110 11236788899999999999999988887 89999999999999999999
Q ss_pred HHHHHHHHhHHHHHhccCCHHHHHHHHHHHHHHHHhcccCcccccC
Q 035870 797 CWRKNFMEKQSKILALGFNDKFIRTWEYYFDYCAAGFKSYTLGNYQ 842 (842)
Q Consensus 797 ~w~~~~~~~~~~~~~~g~~~~~~r~w~~y~~~~~~~f~~~~~~~~q 842 (842)
.|.++|.++++++.+. +++.|.|+|++||++|+++|+.|.++++|
T Consensus 264 ~w~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~f~~g~~~~~~ 308 (318)
T 2fk8_A 264 IWGDTLQSNKDKAIEV-TSEEVYNRYMKYLRGCEHYFTDEMLDCSL 308 (318)
T ss_dssp HHHHHHHHTHHHHHHH-SCHHHHHHHHHHHHHHHHHHHTTSCEEEE
T ss_pred HHHHHHHHHHHHHHHh-cChHHHHHHHHHHHHHHHHHHCCCCeEEE
Confidence 9999999999999887 68999999999999999999999998876
No 4
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=100.00 E-value=7.6e-34 Score=324.00 Aligned_cols=397 Identities=22% Similarity=0.267 Sum_probs=273.6
Q ss_pred CcEEEECCChHHHHHHHHHHhCCC--eEEEEecCCCCCCCceeEee-CCeeeecceEeecCC--CchhHHHHHHHcCCCc
Q 035870 1 MRVAVIGAGISGLVSAYVLAKAGV--EVVLYEKDDYLGGHAKTVTF-DGVDLDLGFMVFNRV--TYPNMMEFFESLGVDM 75 (842)
Q Consensus 1 kdV~IIGaGiaGLsaA~~L~~~G~--~V~VlEa~~~~GG~~~s~~~-~g~~~d~G~~~~~~~--~~~~~~~l~~~lGl~~ 75 (842)
|||+|||||++||+||++|+++|+ +|+|||+++++||+++|... +|+.+|.|++++... .++.+.++++++|+..
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vlEa~~~~GG~~~t~~~~~g~~~d~G~~~~~~~~~~~~~~~~l~~~lgl~~ 82 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERLGGWIRSVRGPNGAIFELGPRGIRPAGALGARTLLLVSELGLDS 82 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHTSSSCCEEEEECSSSSSBTTCCEEECTTSCEEESSCCCBCCCHHHHHHHHHHHHHTTCGG
T ss_pred ceEEEECCcHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCceEEEeccCCeEEEeCCCcccCCCcccHHHHHHHHHcCCcc
Confidence 589999999999999999999999 99999999999999999876 599999999998532 2567889999999986
Q ss_pred ccccce-------eeEeccCCCceeeCCCCCCcchhhhhhccCChHHHHHHHHHHhhhHHHHHHHHhhcCCCCCCccccH
Q 035870 76 EMSDMS-------FSVSLEKGHGCEWGSRNGLSSLFAQKKNVLNPYFWQMLREIIKFKDDVLGYLEELESNPDIDRSETL 148 (842)
Q Consensus 76 ~~~~~~-------~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 148 (842)
+..... ..+.+.+|+.+.++. .+...+........+..... +..........++.++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~g~~~~~p~--~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~s~ 146 (477)
T 3nks_A 83 EVLPVRGDHPAAQNRFLYVGGALHALPT--GLRGLLRPSPPFSKPLFWAG--------------LRELTKPRGKEPDETV 146 (477)
T ss_dssp GEEEECTTSHHHHCEEEEETTEEEECCC--SSCC---CCTTSCSCSSHHH--------------HTTTTSCCCCSSCCBH
T ss_pred eeeecCCCCchhcceEEEECCEEEECCC--ChhhcccccchhhhHHHHHH--------------HHhhhcCCCCCCCcCH
Confidence 654221 123334555544432 12222211111111111111 1111111122367899
Q ss_pred HHHHHhcCCCHHHHHHHHHHhhhcccCCCchhhccCCHHHHHHHHhh----ccc-c-----c---------------cCC
Q 035870 149 GQFVNSRGYSELFQKAYLIPICGSIWSCPSEGVTSFSAFSVLSFCRN----HHL-L-----Q---------------LFG 203 (842)
Q Consensus 149 ~~~l~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~----~~~-~-----~---------------~~~ 203 (842)
.+|+.+. +++.+.+.++.|++.++|+.+++++ ++..++..+.. .+. . . ...
T Consensus 147 ~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~l---s~~~~~~~l~~~e~~~gsl~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (477)
T 3nks_A 147 HSFAQRR-LGPEVASLAMDSLCRGVFAGNSREL---SIRSCFPSLFQAEQTHRSILLGLLLGAGRTPQPDSALIRQALAE 222 (477)
T ss_dssp HHHHHHH-HCHHHHHHTHHHHHHHHHSSCTTTB---BHHHHCHHHHHHHHHHSCHHHHHHHC-----CCCCHHHHHHHHT
T ss_pred HHHHHHh-hCHHHHHHHHHHHhcccccCCHHHh---hHHHHHHHHHHHHHHcCCHHHHHHHhcccccCCchhhhhhhccc
Confidence 9999986 7788889999999999999999888 44433222111 000 0 0 011
Q ss_pred CCceEEecCChhHHHHHHHHHhhhcCceEEeCCCeeEEEeCCCc-EEEEeCCCcEEeCCEEEEccChHHHHHhhcCCCCh
Q 035870 204 RPQWLTVRWRSHSYVNKVRKQLESWGCQIRTSSEVCSVLPADKG-CTIVCGDGSREFYNSCVMALHAPDALKILGNQATF 282 (842)
Q Consensus 204 ~~~~~~~~gG~~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~-v~V~~~~G~~~~ad~VV~A~p~~~~~~ll~~~~~~ 282 (842)
...+++++||++.++++|++.+++.|++|+++++|++|+.++++ |.|++. |+++.||+||+|+|++.+.+++++ ..+
T Consensus 223 ~~~~~~~~gG~~~l~~~l~~~l~~~g~~i~~~~~V~~i~~~~~~~~~v~~~-~~~~~ad~vv~a~p~~~~~~ll~~-~~~ 300 (477)
T 3nks_A 223 RWSQWSLRGGLEMLPQALETHLTSRGVSVLRGQPVCGLSLQAEGRWKVSLR-DSSLEADHVISAIPASVLSELLPA-EAA 300 (477)
T ss_dssp TCSEEEETTCTTHHHHHHHHHHHHTTCEEECSCCCCEEEECGGGCEEEECS-SCEEEESEEEECSCHHHHHHHSCG-GGH
T ss_pred CccEEEECCCHHHHHHHHHHHHHhcCCEEEeCCEEEEEEEcCCceEEEEEC-CeEEEcCEEEECCCHHHHHHhccc-cCH
Confidence 24578999999999999999999999999999999999998877 888775 448999999999999999999876 456
Q ss_pred HHHHhccccceee-ceEEEecCCCCcCCCCC---------------Ccceeeecc--cCCCceEEEEEcccc--------
Q 035870 283 DETRILGAFQYVY-SDIFLHRDKRFMPQNPA---------------AWSAWNFLE--SFDSKVCLTYWLNVL-------- 336 (842)
Q Consensus 283 ~~~~~l~~~~~~~-~~v~l~~~~~~~p~~~~---------------~~~~~~~~~--~~~~~~~v~~~~~~l-------- 336 (842)
...+.+.+++|.+ .++++.++.+++|.... .|.+..+.. .+++...++.++...
T Consensus 301 ~~~~~l~~~~~~~~~~v~l~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~l~~~~gg~~~~~~~~~ 380 (477)
T 3nks_A 301 PLARALSAITAVSVAVVNLQYQGAHLPVQGFGHLVPSSEDPGVLGIVYDSVAFPEQDGSPPGLRVTVMLGGSWLQTLEAS 380 (477)
T ss_dssp HHHHHHHTCCEEEEEEEEEEETTCCCSSCSSEEECCTTTCSSEEEEECHHHHCGGGSTTTTCEEEEEEECHHHHHHHHHS
T ss_pred HHHHHHhcCCCCcEEEEEEEECCCCCCCCCceEEccCCCCCCceEEEEeccccCCCCCCCCceEEEEEECCccccccccc
Confidence 6788889999998 47889999887754321 111111111 122556666655421
Q ss_pred -cCCCC-----CCCCeEEe-cCCCCCCcc-eeEEEEcCCCCCCHHHHHHHHhhhh-h-cCCCCeEEecc-ccCCCCCchh
Q 035870 337 -QNLGE-----TSLPFLVT-LNPDHVPEH-TLLKWSTGHPVPSVAASKASLELDH-I-QGKRGIWFCGA-YQGYGFHEDG 405 (842)
Q Consensus 337 -~~l~~-----~~~~~~~~-l~~~~~~~~-~~~~w~~~~p~~~~~~~~~~~~~~~-~-~~~~~l~~aG~-~~g~G~~e~A 405 (842)
..+.+ ...+.+.. ++....|.. .+.+|.++.|.|.+++......+.. . ...++|++||+ |.|.|+ ++|
T Consensus 381 ~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~~v~rw~~a~p~~~~g~~~~~~~~~~~l~~~~~~l~l~G~~~~G~gv-~~a 459 (477)
T 3nks_A 381 GCVLSQELFQQRAQEAAATQLGLKEMPSHCLVHLHKNCIPQYTLGHWQKLESARQFLTAHRLPLTLAGASYEGVAV-NDC 459 (477)
T ss_dssp SCCCCHHHHHHHHHHHHHHHHCCCSCCSEEEEEEEEEEEECCBTTHHHHHHHHHHHHHHTTCSEEECSTTTSCCSH-HHH
T ss_pred cCCCCHHHHHHHHHHHHHHHhCCCCCCcEEEEEEcCCccCCCCCCHHHHHHHHHHHHHhcCCCEEEEccCCCCCcH-HHH
Confidence 00111 01112222 333323333 5679999999999999887777665 2 23468999999 568888 999
Q ss_pred HhHHHHHHHHhcCCc
Q 035870 406 LKAGMTAAHGVLGKS 420 (842)
Q Consensus 406 ~~SG~~aA~~Il~~~ 420 (842)
+.||+++|++|++..
T Consensus 460 ~~sg~~aA~~il~~~ 474 (477)
T 3nks_A 460 IESGRQAAVSVLGTE 474 (477)
T ss_dssp HHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHhcc
Confidence 999999999998753
No 5
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=100.00 E-value=2e-33 Score=320.02 Aligned_cols=399 Identities=17% Similarity=0.262 Sum_probs=266.7
Q ss_pred CcEEEECCChHHHHHHHHHHhCC------CeEEEEecCCCCCCCceeEeeCCeeeecceEeecCCCchhHHHHHHHcCCC
Q 035870 1 MRVAVIGAGISGLVSAYVLAKAG------VEVVLYEKDDYLGGHAKTVTFDGVDLDLGFMVFNRVTYPNMMEFFESLGVD 74 (842)
Q Consensus 1 kdV~IIGaGiaGLsaA~~L~~~G------~~V~VlEa~~~~GG~~~s~~~~g~~~d~G~~~~~~~~~~~~~~l~~~lGl~ 74 (842)
+||+|||||++||+||++|+++| ++|+|||+++++||+++|...+|+.+|.|++++.. .++++.++++++|+.
T Consensus 6 ~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~~~GG~~~s~~~~g~~~d~G~~~~~~-~~~~~~~l~~~lgl~ 84 (470)
T 3i6d_A 6 KHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRVGGKIQTVKKDGYIIERGPDSFLE-RKKSAPQLVKDLGLE 84 (470)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSSSSCTTCCEECCTTCCEESSCCCEET-TCTHHHHHHHHTTCC
T ss_pred CcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCCCCCceEEEeccCCEEeccChhhhhh-CCHHHHHHHHHcCCc
Confidence 38999999999999999999999 99999999999999999999999999999999854 688999999999998
Q ss_pred ccccc--ceeeEeccCCCceeeCCCCCCcchhhhhhccCChHHHHHHHHHHhhhHHHHHHHHhhcCCCCCCccccHHHHH
Q 035870 75 MEMSD--MSFSVSLEKGHGCEWGSRNGLSSLFAQKKNVLNPYFWQMLREIIKFKDDVLGYLEELESNPDIDRSETLGQFV 152 (842)
Q Consensus 75 ~~~~~--~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l 152 (842)
..... ....+.+.+++...++.... ...+......+....... ........+.+ .......++.++.+|+
T Consensus 85 ~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~p~~~~~~~~~~~~~~----~~~~~~~~~~~---~~~~~~~~~~s~~~~~ 156 (470)
T 3i6d_A 85 HLLVNNATGQSYVLVNRTLHPMPKGAV-MGIPTKIAPFVSTGLFSL----SGKARAAMDFI---LPASKTKDDQSLGEFF 156 (470)
T ss_dssp TTEEECCCCCEEEECSSCEEECCC--------------------------CCSHHHHHHHH---SCCCSSSSCCBHHHHH
T ss_pred ceeecCCCCccEEEECCEEEECCCCcc-cCCcCchHHhhccCcCCH----HHHHHHhcCcc---cCCCCCCCCcCHHHHH
Confidence 76531 22233334555444332110 000000000000000000 00000111111 1112223688999999
Q ss_pred HhcCCCHHHHHHHHHHhhhcccCCCchhhccCCHHHHHHHHhh----cc-ccc---------------cCCCCceEEecC
Q 035870 153 NSRGYSELFQKAYLIPICGSIWSCPSEGVTSFSAFSVLSFCRN----HH-LLQ---------------LFGRPQWLTVRW 212 (842)
Q Consensus 153 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~----~~-~~~---------------~~~~~~~~~~~g 212 (842)
.+. ++..+.+.++.|++.++|+.+++++ ++...+.++.. .+ +.. ......+++++|
T Consensus 157 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~---s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (470)
T 3i6d_A 157 RRR-VGDEVVENLIEPLLSGIYAGDIDKL---SLMSTFPQFYQTEQKHRSLILGMKKTRPQGSGQQLTAKKQGQFQTLST 232 (470)
T ss_dssp HHH-SCHHHHHHTHHHHHHHTTCSCTTTB---BHHHHCGGGCC-------------------------------EEEETT
T ss_pred HHh-cCHHHHHHhccchhcEEecCCHHHh---hHHHHHHHHHHHHHhcCcHHHHHHhhccccccccccccCCceEEEeCC
Confidence 986 7888889999999999999998887 33332222110 00 000 001346789999
Q ss_pred ChhHHHHHHHHHhhhcCceEEeCCCeeEEEeCCCcEEEEeCCCcEEeCCEEEEccChHHHHHhhcCCCChHHHHhccccc
Q 035870 213 RSHSYVNKVRKQLESWGCQIRTSSEVCSVLPADKGCTIVCGDGSREFYNSCVMALHAPDALKILGNQATFDETRILGAFQ 292 (842)
Q Consensus 213 G~~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VV~A~p~~~~~~ll~~~~~~~~~~~l~~~~ 292 (842)
|++.+++.|++.+++ ++|+++++|++|+.++++|.|++.+|+++.||+||+|+|++++.+++.++ +..+++..++
T Consensus 233 g~~~l~~~l~~~l~~--~~i~~~~~V~~i~~~~~~~~v~~~~g~~~~ad~vi~a~p~~~~~~l~~~~---~~~~~~~~~~ 307 (470)
T 3i6d_A 233 GLQTLVEEIEKQLKL--TKVYKGTKVTKLSHSGSCYSLELDNGVTLDADSVIVTAPHKAAAGMLSEL---PAISHLKNMH 307 (470)
T ss_dssp CTHHHHHHHHHTCCS--EEEECSCCEEEEEECSSSEEEEESSSCEEEESEEEECSCHHHHHHHTTTS---TTHHHHHTCE
T ss_pred hHHHHHHHHHHhcCC--CEEEeCCceEEEEEcCCeEEEEECCCCEEECCEEEECCCHHHHHHHcCCc---hhhHHHhcCC
Confidence 999999999999854 79999999999999999999999999889999999999999999998763 2467788899
Q ss_pred eee-ceEEEecCCCCcCCCCC-----------------Ccceeeecc-cCCCceEEEEEccccc-----CCCC-----CC
Q 035870 293 YVY-SDIFLHRDKRFMPQNPA-----------------AWSAWNFLE-SFDSKVCLTYWLNVLQ-----NLGE-----TS 343 (842)
Q Consensus 293 ~~~-~~v~l~~~~~~~p~~~~-----------------~~~~~~~~~-~~~~~~~v~~~~~~l~-----~l~~-----~~ 343 (842)
|.+ .++++.++.++|+.... .|.+..+.. .|++..++..++.... .+.+ .+
T Consensus 308 ~~~~~~v~l~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~s~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 387 (470)
T 3i6d_A 308 STSVANVALGFPEGSVQMEHEGTGFVISRNSDFAITACTWTNKKWPHAAPEGKTLLRAYVGKAGDESIVDLSDNDIINIV 387 (470)
T ss_dssp EEEEEEEEEEESSTTCCCSSCSSEEEECSTTCCSEEEEEEHHHHCGGGSCTTCEEEEEEECCSSCCGGGTSCHHHHHHHH
T ss_pred CCceEEEEEEECchhcCCCCCCeEEEccCCCCCCceEEEEEcCcCCCcCCCCCEEEEEEECCCCCccccCCCHHHHHHHH
Confidence 999 58889999887753210 122211222 2455666666553211 1111 01
Q ss_pred CCeEEecCC-CCCCcc-eeEEEEcCCCCCCHHHHHHHHhhhh--hcCCCCeEEecc-ccCCCCCchhHhHHHHHHHHhcC
Q 035870 344 LPFLVTLNP-DHVPEH-TLLKWSTGHPVPSVAASKASLELDH--IQGKRGIWFCGA-YQGYGFHEDGLKAGMTAAHGVLG 418 (842)
Q Consensus 344 ~~~~~~l~~-~~~~~~-~~~~w~~~~p~~~~~~~~~~~~~~~--~~~~~~l~~aG~-~~g~G~~e~A~~SG~~aA~~Il~ 418 (842)
.+.+..+.+ ...|.. .+.+|.++.|.|.+++......+.+ .++.+|||+||+ +.|.|+ ++|+.||+++|++|+.
T Consensus 388 ~~~l~~~~g~~~~p~~~~~~~w~~a~p~~~~g~~~~~~~~~~~l~~~~~~l~~aG~~~~g~gv-~~a~~sG~~aA~~i~~ 466 (470)
T 3i6d_A 388 LEDLKKVMNINGEPEMTCVTRWHESMPQYHVGHKQRIKELREALASAYPGVYMTGASFEGVGI-PDCIDQGKAAVSDALT 466 (470)
T ss_dssp HHHHGGGSCCCSCCSEEEEEEEEEEEEECBTTHHHHHHHHHHHHHHHSTTEEECSTTTSCCSH-HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCCceEEEEEEcCCccCCCCCCHHHHHHHHHHHHHhhCCCEEEEeecCCCCCH-HHHHHHHHHHHHHHHH
Confidence 122222322 222332 6779999999999988776655544 245689999999 457776 9999999999999975
No 6
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=100.00 E-value=2.7e-32 Score=311.15 Aligned_cols=392 Identities=19% Similarity=0.225 Sum_probs=264.5
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCeEEEEecCCCCCCCceeEeeCCeeeecceEeecCCCchhHHHHHHHcCCCcccccc
Q 035870 1 MRVAVIGAGISGLVSAYVLAKAGVEVVLYEKDDYLGGHAKTVTFDGVDLDLGFMVFNRVTYPNMMEFFESLGVDMEMSDM 80 (842)
Q Consensus 1 kdV~IIGaGiaGLsaA~~L~~~G~~V~VlEa~~~~GG~~~s~~~~g~~~d~G~~~~~~~~~~~~~~l~~~lGl~~~~~~~ 80 (842)
+||+|||||++||+||+.|+++|++|+|||+++++||+++|.+.+|+.+|.|++++.. .++.+.++++++|+.......
T Consensus 17 ~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~~~GGr~~t~~~~g~~~~~g~~~~~~-~~~~~~~~~~~~gl~~~~~~~ 95 (478)
T 2ivd_A 17 MNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARLGGAVGTHALAGYLVEQGPNSFLD-REPATRALAAALNLEGRIRAA 95 (478)
T ss_dssp CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSSSBTTCCEEEETTEEEESSCCCEET-TCHHHHHHHHHTTCGGGEECS
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceeeeeccCCeeeecChhhhhh-hhHHHHHHHHHcCCcceeeec
Confidence 5899999999999999999999999999999999999999999999999999999964 578889999999997543311
Q ss_pred ----eeeEeccCCCceeeCCCCCCcchhhhhhccCChHHHHHHHHHHhhhHHHHHHHHhhcCC-CCCCccccHHHHHHhc
Q 035870 81 ----SFSVSLEKGHGCEWGSRNGLSSLFAQKKNVLNPYFWQMLREIIKFKDDVLGYLEELESN-PDIDRSETLGQFVNSR 155 (842)
Q Consensus 81 ----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~l~~~ 155 (842)
...+.+.+|+.+.++. ....++.. .... +.... ..+...... ....++.|+.+|+++.
T Consensus 96 ~~~~~~~~~~~~g~~~~~p~--~~~~~~~~--~~~~--~~~~~-----------~~~~~~~~~~~~~~~~~s~~~~l~~~ 158 (478)
T 2ivd_A 96 DPAAKRRYVYTRGRLRSVPA--SPPAFLAS--DILP--LGARL-----------RVAGELFSRRAPEGVDESLAAFGRRH 158 (478)
T ss_dssp CSSCCCEEEEETTEEEECCC--SHHHHHTC--SSSC--HHHHH-----------HHHGGGGCCCCCTTCCCBHHHHHHHH
T ss_pred CccccceEEEECCEEEECCC--CHHHhccC--CCCC--HHHHH-----------HHhhhhhcCCCCCCCCCCHHHHHHHh
Confidence 1223334444333321 11111100 0111 00000 111111111 1113678999999986
Q ss_pred CCCHHHHHHHHHHhhhcccCCCchhhccCCHHHHHHHHh----hcc-c----c----------c-cCCC----CceEEec
Q 035870 156 GYSELFQKAYLIPICGSIWSCPSEGVTSFSAFSVLSFCR----NHH-L----L----------Q-LFGR----PQWLTVR 211 (842)
Q Consensus 156 ~~~~~~~~~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~~----~~~-~----~----------~-~~~~----~~~~~~~ 211 (842)
+++.+.+.++.|++..+|+.++++++ +..++..+. ..+ + . . .... ..+++++
T Consensus 159 -~~~~~~~~~~~~~~~~~~~~~~~~~s---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (478)
T 2ivd_A 159 -LGHRATQVLLDAVQTGIYAGDVEQLS---VAATFPMLVKMEREHRSLILGAIRAQKAQRQAALPAGTAPKLSGALSTFD 234 (478)
T ss_dssp -TCHHHHHHTHHHHHHHHHCCCTTTBB---HHHHCHHHHHHHHHHSSHHHHHHHHHHHHTCC----CCSCCCCCCEEEET
T ss_pred -hCHHHHHHHHHHHhceeecCCHHHhh---HHHHhHHHHHHHHhcCcHHHHHHHhhhccccccCcccccccccccEEEEC
Confidence 78888899999999999999988874 322221110 000 0 0 0 0012 5788999
Q ss_pred CChhHHHHHHHHHhhhcCceEEeCCCeeEEEeCCCcEEEEe---CCCcEEeCCEEEEccChHHHHHhhcCCCChHHHHhc
Q 035870 212 WRSHSYVNKVRKQLESWGCQIRTSSEVCSVLPADKGCTIVC---GDGSREFYNSCVMALHAPDALKILGNQATFDETRIL 288 (842)
Q Consensus 212 gG~~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v~V~~---~~G~~~~ad~VV~A~p~~~~~~ll~~~~~~~~~~~l 288 (842)
||++.++++|++.+ |++|+++++|++|..++++|.|++ .+|+++.||+||+|+|++.+.+++++ +++...+++
T Consensus 235 gG~~~l~~~l~~~l---g~~i~~~~~V~~i~~~~~~~~v~~~~~~~g~~~~ad~vV~a~~~~~~~~ll~~-l~~~~~~~l 310 (478)
T 2ivd_A 235 GGLQVLIDALAASL---GDAAHVGARVEGLAREDGGWRLIIEEHGRRAELSVAQVVLAAPAHATAKLLRP-LDDALAALV 310 (478)
T ss_dssp TCTHHHHHHHHHHH---GGGEESSEEEEEEECC--CCEEEEEETTEEEEEECSEEEECSCHHHHHHHHTT-TCHHHHHHH
T ss_pred CCHHHHHHHHHHHh---hhhEEcCCEEEEEEecCCeEEEEEeecCCCceEEcCEEEECCCHHHHHHHhhc-cCHHHHHHH
Confidence 99999999999998 679999999999999888899988 77888999999999999999999875 677778888
Q ss_pred cccceee-ceEEEecCCCCcCCC-CC---------------Ccceeeecc-cCCCceEEEEEccccc-----CCCCC---
Q 035870 289 GAFQYVY-SDIFLHRDKRFMPQN-PA---------------AWSAWNFLE-SFDSKVCLTYWLNVLQ-----NLGET--- 342 (842)
Q Consensus 289 ~~~~~~~-~~v~l~~~~~~~p~~-~~---------------~~~~~~~~~-~~~~~~~v~~~~~~l~-----~l~~~--- 342 (842)
.++++.+ .++++.++.++|+.. .. .|.++.+.. .|++..+++.++.... .+.+.
T Consensus 311 ~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~g~~~l~~~~~~~~~~~~~~~~~~~~~ 390 (478)
T 2ivd_A 311 AGIAYAPIAVVHLGFDAGTLPAPDGFGFLVPAEEQRRMLGAIHASTTFPFRAEGGRVLYSCMVGGARQPGLVEQDEDALA 390 (478)
T ss_dssp HTCCBCCEEEEEEEECTTSSCCCCSSEEECCGGGCCSCCEEEEHHHHCGGGBSTTCEEEEEEEECTTCGGGGGSCHHHHH
T ss_pred hcCCCCcEEEEEEEEccccCCCCCceEEEecCCCCCceEEEEEEcccCCCcCCCCCEEEEEEeCCcCCccccCCCHHHHH
Confidence 9999988 588899998876642 11 111111111 2445556665554221 11110
Q ss_pred --CCCeEEec-CCCCCCcc-eeEEEEcCCCCCCHHHHHHHHhhhh-hcCCCCeEEecccc-CCCCCchhHhHHHHHHHHh
Q 035870 343 --SLPFLVTL-NPDHVPEH-TLLKWSTGHPVPSVAASKASLELDH-IQGKRGIWFCGAYQ-GYGFHEDGLKAGMTAAHGV 416 (842)
Q Consensus 343 --~~~~~~~l-~~~~~~~~-~~~~w~~~~p~~~~~~~~~~~~~~~-~~~~~~l~~aG~~~-g~G~~e~A~~SG~~aA~~I 416 (842)
+.+.+..+ .....|.. .+.+|..++|.|.++.......+.. ....+||||||+|+ +.|+ ++|+.||+++|++|
T Consensus 391 ~~~~~~l~~~~~~~~~p~~~~~~~w~~~~p~~~~g~~~~~~~~~~~~~~~~~l~~aG~~~~g~gv-~gA~~SG~~aA~~i 469 (478)
T 2ivd_A 391 ALAREELKALAGVTARPSFTRVFRWPLGIPQYNLGHLERVAAIDAALQRLPGLHLIGNAYKGVGL-NDCIRNAAQLADAL 469 (478)
T ss_dssp HHHHHHHHHHHCCCSCCSEEEEEEESSCCBCCBTTHHHHHHHHHHHHHTSTTEEECSTTTSCCSH-HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCcEEEEEECCCcccCCCcCHHHHHHHHHHHHhhCCCEEEEccCCCCCCH-HHHHHHHHHHHHHH
Confidence 11111222 22222332 5569999999888887655444433 22258999999986 7776 99999999999999
Q ss_pred cCC
Q 035870 417 LGK 419 (842)
Q Consensus 417 l~~ 419 (842)
++.
T Consensus 470 ~~~ 472 (478)
T 2ivd_A 470 VAG 472 (478)
T ss_dssp CC-
T ss_pred HHh
Confidence 764
No 7
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=100.00 E-value=2e-32 Score=311.97 Aligned_cols=399 Identities=16% Similarity=0.267 Sum_probs=268.1
Q ss_pred CcEEEECCChHHHHHHHHHHhCC--CeEEEEecCCCCCCCceeEeeCCeeeecceEeecCCCchhHHHHHHHcCCCcccc
Q 035870 1 MRVAVIGAGISGLVSAYVLAKAG--VEVVLYEKDDYLGGHAKTVTFDGVDLDLGFMVFNRVTYPNMMEFFESLGVDMEMS 78 (842)
Q Consensus 1 kdV~IIGaGiaGLsaA~~L~~~G--~~V~VlEa~~~~GG~~~s~~~~g~~~d~G~~~~~~~~~~~~~~l~~~lGl~~~~~ 78 (842)
+||+|||||++||+||++|+++| ++|+|||+++++||+++|...+|+.+|.|++++.. .++.+.++++++|++....
T Consensus 5 ~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~~~~~GG~~~~~~~~g~~~~~g~~~~~~-~~~~~~~l~~~lg~~~~~~ 83 (475)
T 3lov_A 5 KRLVIVGGGITGLAAAYYAERAFPDLNITLLEAGERLGGKVATYREDGFTIERGPDSYVA-RKHILTDLIEAIGLGEKLV 83 (475)
T ss_dssp CEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSSSSSBTTCCEECSTTCCEESSCCCEET-TSTHHHHHHHHTTCGGGEE
T ss_pred ccEEEECCCHHHHHHHHHHHHhCCCCCEEEEECCCCCCceeEEEeeCCEEEecCchhhhc-ccHHHHHHHHHcCCcceEe
Confidence 48999999999999999999999 99999999999999999999999999999999854 6788999999999987654
Q ss_pred c--ceeeEeccCCCceeeCCCC--CCcchhhh--hhccCChHHHHHHHHHHhhhHHHHHHHHhhcC-CCCCCccccHHHH
Q 035870 79 D--MSFSVSLEKGHGCEWGSRN--GLSSLFAQ--KKNVLNPYFWQMLREIIKFKDDVLGYLEELES-NPDIDRSETLGQF 151 (842)
Q Consensus 79 ~--~~~~~~~~~g~~~~~~~~~--~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~ 151 (842)
. ....+.+.+++...++... +++..... ....+... ... ...+....... .....++.++.+|
T Consensus 84 ~~~~~~~~~~~~g~~~~~p~~~~~~~p~~~~~~~~~~~~~~~-----~~~-----~~~~~~~~~~~~~~~~~~~~s~~~~ 153 (475)
T 3lov_A 84 RNNTSQAFILDTGGLHPIPKGAVMGIPTDLDLFRQTTLLTEE-----EKQ-----EVADLLLHPSDSLRIPEQDIPLGEY 153 (475)
T ss_dssp ECCCCCEEEEETTEEEECCSSEETTEESCHHHHTTCSSSCHH-----HHH-----HHHHHHHSCCTTCCCCSSCCBHHHH
T ss_pred ecCCCceEEEECCEEEECCCcccccCcCchHHHhhccCCChh-----HHH-----HhhCcccCCcccccCCCCCcCHHHH
Confidence 2 2223333455544443211 00000000 00111111 000 11111211111 0012367899999
Q ss_pred HHhcCCCHHHHHHHHHHhhhcccCCCchhhccCCHHHHH-HHHhhccc-cc------------------cCCCCceEEec
Q 035870 152 VNSRGYSELFQKAYLIPICGSIWSCPSEGVTSFSAFSVL-SFCRNHHL-LQ------------------LFGRPQWLTVR 211 (842)
Q Consensus 152 l~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~-~~------------------~~~~~~~~~~~ 211 (842)
+.+. +++.+.+.++.|++.++|+.++++++.......+ .+....+. .. ....+.+++++
T Consensus 154 l~~~-~~~~~~~~~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (475)
T 3lov_A 154 LRPR-LGDALVEKLIEPLLSGIYAGNIDQMSTFATYPQFVANEQKAGSLFEGMRLMRPLDQLPQTPQTTIKATGQFLSLE 232 (475)
T ss_dssp HHHH-HCHHHHHHTHHHHHHGGGCCCTTTSBSTTTCHHHHHHHHHHSSHHHHHHHTCC--------------CCSEEEET
T ss_pred HHHH-hCHHHHHHHHHHHhceeecCChHHcCHHHHHHHHHHHHHhcCcHHHHHHHhcccccccccccccccCCCcEEeeC
Confidence 9986 7888899999999999999999988654332221 11111100 00 01246789999
Q ss_pred CChhHHHHHHHHHhhhcCceEEeCCCeeEEEeCCCcEEEEeCCCcEEeCCEEEEccChHHHHHhhcCCCChHHHHhcccc
Q 035870 212 WRSHSYVNKVRKQLESWGCQIRTSSEVCSVLPADKGCTIVCGDGSREFYNSCVMALHAPDALKILGNQATFDETRILGAF 291 (842)
Q Consensus 212 gG~~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VV~A~p~~~~~~ll~~~~~~~~~~~l~~~ 291 (842)
||++.++++|++.+.+ ++|+++++|++|+.++++|.|++.+| ++.||+||+|+|++++.+++++.+. +.+.++
T Consensus 233 ~G~~~l~~~l~~~l~~--~~i~~~~~V~~i~~~~~~~~v~~~~g-~~~ad~vV~a~p~~~~~~ll~~~~~----~~~~~~ 305 (475)
T 3lov_A 233 TGLESLIERLEEVLER--SEIRLETPLLAISREDGRYRLKTDHG-PEYADYVLLTIPHPQVVQLLPDAHL----PELEQL 305 (475)
T ss_dssp TCHHHHHHHHHHHCSS--CEEESSCCCCEEEEETTEEEEECTTC-CEEESEEEECSCHHHHHHHCTTSCC----HHHHTC
T ss_pred ChHHHHHHHHHhhccC--CEEEcCCeeeEEEEeCCEEEEEECCC-eEECCEEEECCCHHHHHHHcCccCH----HHHhcC
Confidence 9999999999999964 79999999999999999999999999 8999999999999999999876322 677888
Q ss_pred ceee-ceEEEecCCCCc----------CCCCC------Ccceeeecc-cCCCceEEEEEccccc-----CCCCC-----C
Q 035870 292 QYVY-SDIFLHRDKRFM----------PQNPA------AWSAWNFLE-SFDSKVCLTYWLNVLQ-----NLGET-----S 343 (842)
Q Consensus 292 ~~~~-~~v~l~~~~~~~----------p~~~~------~~~~~~~~~-~~~~~~~v~~~~~~l~-----~l~~~-----~ 343 (842)
+|.+ .++++.++.++. |.... .|.+..+.. .|+ ...++.++.... .+.+. +
T Consensus 306 ~~~~~~~v~l~~~~~~~~~~~g~g~l~~~~~~~~~~~~~~~s~~~~~~~p~-~~~l~~~~~~~~~~~~~~~~~e~~~~~~ 384 (475)
T 3lov_A 306 TTHSTATVTMIFDQQQSLPIEGTGFVVNRRAPYSITACTAIDQKWNHSAPD-HTVLRAFVGRPGNDHLVHESDEVLQQAV 384 (475)
T ss_dssp CEEEEEEEEEEEECCSSCSSSSSEEEECTTSSCSEEEEEEHHHHCTTTCTT-EEEEEEEECBTTBCGGGGSCHHHHHHHH
T ss_pred CCCeEEEEEEEECCcCCCCCCCEEEEecCCCCCceEEEEEEcccCCCCCCC-cEEEEEEeCCCCCCcccCCCHHHHHHHH
Confidence 9998 578888887651 11110 111111121 123 455555553211 11110 1
Q ss_pred CCeEEec-CCCCCCcc-eeEEEEcCCCCCCHHHHHHHHhhhh--hcCCCCeEEeccc-cCCCCCchhHhHHHHHHHHhcC
Q 035870 344 LPFLVTL-NPDHVPEH-TLLKWSTGHPVPSVAASKASLELDH--IQGKRGIWFCGAY-QGYGFHEDGLKAGMTAAHGVLG 418 (842)
Q Consensus 344 ~~~~~~l-~~~~~~~~-~~~~w~~~~p~~~~~~~~~~~~~~~--~~~~~~l~~aG~~-~g~G~~e~A~~SG~~aA~~Il~ 418 (842)
.+.+..+ +....|.. .+.+|..+.|.|.+++......+.+ .++.+||||||+| .+.|+ ++|+.||+++|++|++
T Consensus 385 ~~~L~~~~g~~~~p~~~~v~~w~~a~p~~~~g~~~~~~~~~~~l~~~~~~l~~aG~~~~g~g~-~~a~~sG~~aA~~i~~ 463 (475)
T 3lov_A 385 LQDLEKICGRTLEPKQVIISRLMDGLPAYTVGHADRIQRVREEVLAQYPGIYLAGLAYDGVGL-PDCVASAKTMIESIEL 463 (475)
T ss_dssp HHHHHHHHSSCCCCSEEEEEEEEEEEECCCTTHHHHHHHHHHHHHHHSTTEEECSTTTSCSSH-HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCCCeEEEEEEcccCCCCCCCChHHHHHHHHHHHHhhCCCEEEEccCCCCCCH-HHHHHHHHHHHHHHHH
Confidence 1122222 22222332 6779999999999998776655554 2456899999985 46676 9999999999999987
Q ss_pred Cc
Q 035870 419 KS 420 (842)
Q Consensus 419 ~~ 420 (842)
.-
T Consensus 464 ~l 465 (475)
T 3lov_A 464 EQ 465 (475)
T ss_dssp TC
T ss_pred Hh
Confidence 54
No 8
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=100.00 E-value=2.9e-32 Score=306.16 Aligned_cols=390 Identities=18% Similarity=0.195 Sum_probs=253.4
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCeEEEEecCCCCCCCceeEeeCCeeeecceEeecC-CCchhHHHHHHHcCCCccccc
Q 035870 1 MRVAVIGAGISGLVSAYVLAKAGVEVVLYEKDDYLGGHAKTVTFDGVDLDLGFMVFNR-VTYPNMMEFFESLGVDMEMSD 79 (842)
Q Consensus 1 kdV~IIGaGiaGLsaA~~L~~~G~~V~VlEa~~~~GG~~~s~~~~g~~~d~G~~~~~~-~~~~~~~~l~~~lGl~~~~~~ 79 (842)
|||+|||||++||+||++|+++|++|+|||+++++||++++...+|+.+|.|++++.+ ..++.+.++++++|+......
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~GG~~~~~~~~G~~~d~G~~~~~~~~~~~~~~~l~~~lg~~~~~~~ 80 (425)
T 3ka7_A 1 MKTVVIGAGLGGLLSAARLSKAGHEVEVFERLPITGGRFTNLSYKGFQLSSGAFHMLPNGPGGPLACFLKEVEASVNIVR 80 (425)
T ss_dssp CEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBTTSSEEEETTEEEESSSCSCBTTGGGSHHHHHHHHTTCCCCEEE
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCceEEEeCCCCCCCceeeeccCCcEEcCCCceEecCCCccHHHHHHHHhCCCceEEe
Confidence 7999999999999999999999999999999999999999999999999999866533 245567899999998765432
Q ss_pred ceee-Ee--ccCCCceeeCCCCCCcchhhhhhccCChHHHHHHHHHHhhhHHHHHHHHhhcCCCCCCccccHHHHHHhcC
Q 035870 80 MSFS-VS--LEKGHGCEWGSRNGLSSLFAQKKNVLNPYFWQMLREIIKFKDDVLGYLEELESNPDIDRSETLGQFVNSRG 156 (842)
Q Consensus 80 ~~~~-~~--~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~ 156 (842)
.... .. ..++. ..+... +-...+......+.+.- ..++. ..+..... ...+..++.+|+.+.
T Consensus 81 ~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~------~~~~~----~~~~~~~~--~~~~~~s~~~~l~~~- 145 (425)
T 3ka7_A 81 SEMTTVRVPLKKGN-PDYVKG-FKDISFNDFPSLLSYKD------RMKIA----LLIVSTRK--NRPSGSSLQAWIKSQ- 145 (425)
T ss_dssp CCCCEEEEESSTTC-CSSTTC-EEEEEGGGGGGGSCHHH------HHHHH----HHHHHTTT--SCCCSSBHHHHHHHH-
T ss_pred cCCceEEeecCCCc-cccccc-ccceehhhhhhhCCHHH------HHHHH----HHHHhhhh--cCCCCCCHHHHHHHh-
Confidence 2111 11 11100 000000 00000111111122110 01111 01111111 122578999999988
Q ss_pred CCHHHHHHHHHHhhhcccCCCchhhccCCHHHHHHHHhhccccccCCCCceEEecCChhHHHHHHHHHhhhcCceEEeCC
Q 035870 157 YSELFQKAYLIPICGSIWSCPSEGVTSFSAFSVLSFCRNHHLLQLFGRPQWLTVRWRSHSYVNKVRKQLESWGCQIRTSS 236 (842)
Q Consensus 157 ~~~~~~~~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG~~~l~~~L~~~l~~~G~~i~~~~ 236 (842)
+.+...+.++.+++...++.+++++ ++..+...+.... ..+...+++||++.++++|++.++++|++|++++
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~---s~~~~~~~~~~~~-----~~~~~~~~~gG~~~l~~~l~~~~~~~G~~i~~~~ 217 (425)
T 3ka7_A 146 VSDEWLIKFADSFCGWALSLKSDEV---PVEEVFEIIENMY-----RFGGTGIPEGGCKGIIDALETVISANGGKIHTGQ 217 (425)
T ss_dssp CCCHHHHHHHHHHHHHHHSSCGGGS---BHHHHHHHHHHHH-----HHCSCEEETTSHHHHHHHHHHHHHHTTCEEECSC
T ss_pred cCCHHHHHHHHHHHHHHhCCCcccc---hHHHHHHHHHHHH-----hcCCccccCCCHHHHHHHHHHHHHHcCCEEEECC
Confidence 5566677888899888899888887 4443333332210 1134567899999999999999999999999999
Q ss_pred CeeEEEeCCCcEE-EEeCCCcEEeCCEEEEccChHHHHHhhcCCC----ChHHHHhccccceee-ceEEEecCCCCcCCC
Q 035870 237 EVCSVLPADKGCT-IVCGDGSREFYNSCVMALHAPDALKILGNQA----TFDETRILGAFQYVY-SDIFLHRDKRFMPQN 310 (842)
Q Consensus 237 ~V~~I~~~~~~v~-V~~~~G~~~~ad~VV~A~p~~~~~~ll~~~~----~~~~~~~l~~~~~~~-~~v~l~~~~~~~p~~ 310 (842)
+|++|..+++++. |++. |+++.||+||+|+|++.+.+++++.. ++...+.+.++++++ .++++.++.++++..
T Consensus 218 ~V~~i~~~~~~~~gv~~~-g~~~~ad~VV~a~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~ 296 (425)
T 3ka7_A 218 EVSKILIENGKAAGIIAD-DRIHDADLVISNLGHAATAVLCSEALSKEADAAYFKMVGTLQPSAGIKICLAADEPLVGHT 296 (425)
T ss_dssp CEEEEEEETTEEEEEEET-TEEEECSEEEECSCHHHHHHHTTTTCCTTTTHHHHHHHHHCCCBEEEEEEEEESSCSSCSS
T ss_pred ceeEEEEECCEEEEEEEC-CEEEECCEEEECCCHHHHHHhcCCcccccCCHHHHHHhhCcCCCceEEEEeecCCCccCcC
Confidence 9999999988875 7665 77899999999999999999987432 455567778888877 467788877643221
Q ss_pred -------CC-----Ccceeeec-ccCCCceEEEEEcccc-cCCC------CCCCCeEEecCCCCCCcc-eeEEEEcCCCC
Q 035870 311 -------PA-----AWSAWNFL-ESFDSKVCLTYWLNVL-QNLG------ETSLPFLVTLNPDHVPEH-TLLKWSTGHPV 369 (842)
Q Consensus 311 -------~~-----~~~~~~~~-~~~~~~~~v~~~~~~l-~~l~------~~~~~~~~~l~~~~~~~~-~~~~w~~~~p~ 369 (842)
.. .+.+...+ ..|+++.++....... .... +...+.+..+.|...++. .+.+|..++|.
T Consensus 297 ~~~~~~~~~~~~~~~~~s~~~p~~ap~G~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~v~~~~~~~P~ 376 (425)
T 3ka7_A 297 GVLLTPYTRRINGVNEVTQADPELAPPGKHLTMCHQYVAPENVKNLESEIEMGLEDLKEIFPGKRYEVLLIQSYHDEWPV 376 (425)
T ss_dssp SEEECCSSSSEEEEECGGGTCGGGSCTTCEEEEEEEEECGGGGGGHHHHHHHHHHHHHHHSTTCCEEEEEEEEEBTTBCS
T ss_pred EEEECCChhhcceEEeccCCCCCcCCCCCeEEEEEeccccccccchHHHHHHHHHHHHHhCCCCceEEEEEEEECCCccc
Confidence 11 11111111 1355666654433211 1111 111122233344323333 55699999999
Q ss_pred CCHHHHHHHHhhhhhcCCCCeEEecccc----CCCCCchhHhHHHHHHHHhcC
Q 035870 370 PSVAASKASLELDHIQGKRGIWFCGAYQ----GYGFHEDGLKAGMTAAHGVLG 418 (842)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~l~~aG~~~----g~G~~e~A~~SG~~aA~~Il~ 418 (842)
|.+++. .++....+.+|||+||+|+ |.|+ ++|+.||+++|++|+|
T Consensus 377 ~~~~~~---~~~~~~~p~~gL~laG~~~~~~gg~gv-~~~~~s~~~~~~~i~~ 425 (425)
T 3ka7_A 377 NRAASG---TDPGNETPFSGLYVVGDGAKGKGGIEV-EGVALGVMSVMEKVLG 425 (425)
T ss_dssp BSSCTT---CCCCSBCSSBTEEECSTTSCCTTCCHH-HHHHHHHHHHHHC---
T ss_pred cccccC---CCCCCCCCcCCeEEeCCccCCCCCCcc-HHHHHHHHHHHHHhhC
Confidence 987633 3344466778999999977 3566 9999999999999986
No 9
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=100.00 E-value=8.9e-32 Score=308.12 Aligned_cols=399 Identities=14% Similarity=0.105 Sum_probs=259.4
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCeEEEEecCCCCCCCceeEeeCCeeeecceEeecCCCchhHHHHHHHcCCCcccccc
Q 035870 1 MRVAVIGAGISGLVSAYVLAKAGVEVVLYEKDDYLGGHAKTVTFDGVDLDLGFMVFNRVTYPNMMEFFESLGVDMEMSDM 80 (842)
Q Consensus 1 kdV~IIGaGiaGLsaA~~L~~~G~~V~VlEa~~~~GG~~~s~~~~g~~~d~G~~~~~~~~~~~~~~l~~~lGl~~~~~~~ 80 (842)
+||+|||||++||+||++|+++|++|+|||+++++|||++|.+.+|+.+|.|++++++ .++++.++++++|+.......
T Consensus 40 ~~v~iiGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GGr~~t~~~~g~~~d~G~~~~~~-~~~~~~~~l~~lgl~~~~~~~ 118 (495)
T 2vvm_A 40 WDVIVIGGGYCGLTATRDLTVAGFKTLLLEARDRIGGRSWSSNIDGYPYEMGGTWVHW-HQSHVWREITRYKMHNALSPS 118 (495)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSBSBTTCCEEEETTEEEECSCCCBCT-TSHHHHHHHHHTTCTTCEEES
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCCEEEEeCCCCCCCcceecccCCeeecCCCeEecC-ccHHHHHHHHHcCCcceeecc
Confidence 3799999999999999999999999999999999999999999999999999999964 688999999999995332211
Q ss_pred ------eeeEeccC--CCceeeCCCCCCcchhhhhhccCChHHHHHHHHHHhhhH-HHHHHHHhhcCC---C--CCCccc
Q 035870 81 ------SFSVSLEK--GHGCEWGSRNGLSSLFAQKKNVLNPYFWQMLREIIKFKD-DVLGYLEELESN---P--DIDRSE 146 (842)
Q Consensus 81 ------~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~---~--~~~~~~ 146 (842)
...+.+.+ +....++ ... ....+...+..+.+... .....+...... + ...++.
T Consensus 119 ~~~~~~~~~~~~~~~~g~~~~~~---------~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (495)
T 2vvm_A 119 FNFSRGVNHFQLRTNPTTSTYMT---------HEA---EDELLRSALHKFTNVDGTNGRTVLPFPHDMFYVPEFRKYDEM 186 (495)
T ss_dssp CCCSSSCCEEEEESSTTCCEEEC---------HHH---HHHHHHHHHHHHHCSSSSTTTTTCSCTTSTTSSTTHHHHHTS
T ss_pred cccCCCceEEEecCCCCceeecC---------HHH---HHHHHHHHHHHHHccchhhhhhcCCCCCCcccCcchhhhhhh
Confidence 01111111 1111110 000 00000111111111000 000000000000 0 001467
Q ss_pred cHHHHHHhcC--CCHHHHHHHHHHhhhcccCCCchhhccCCHHHHHHHHhhcc--ccccCCCCceEEecCChhHHHHHHH
Q 035870 147 TLGQFVNSRG--YSELFQKAYLIPICGSIWSCPSEGVTSFSAFSVLSFCRNHH--LLQLFGRPQWLTVRWRSHSYVNKVR 222 (842)
Q Consensus 147 s~~~~l~~~~--~~~~~~~~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~gG~~~l~~~L~ 222 (842)
|+.+|+++.+ +++.. ..++.+++...++.+++++ ++..++.++.... ..........++++||++.++++|+
T Consensus 187 s~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~---s~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG~~~l~~~l~ 262 (495)
T 2vvm_A 187 SYSERIDQIRDELSLNE-RSSLEAFILLCSGGTLENS---SFGEFLHWWAMSGYTYQGCMDCLMSYKFKDGQSAFARRFW 262 (495)
T ss_dssp BHHHHHHHHGGGCCHHH-HHHHHHHHHHHHSSCTTTS---BHHHHHHHHHHTTSSHHHHHHHHHSEEETTCHHHHHHHHH
T ss_pred hHHHHHHHhhccCCHHH-HHHHHHHHHHhcCCCcchh---hHHHHHHHHHHcCCCHHHHHhhhceEEeCCCHHHHHHHHH
Confidence 9999999876 66654 5788899999998888877 6666665543221 0000112345678999999999999
Q ss_pred HHhhhcC-ceEEeCCCeeEEEeCCCcEEEEeCCCcEEeCCEEEEccChHHHHHhh-cCCCChHHHHhccccceee-ceEE
Q 035870 223 KQLESWG-CQIRTSSEVCSVLPADKGCTIVCGDGSREFYNSCVMALHAPDALKIL-GNQATFDETRILGAFQYVY-SDIF 299 (842)
Q Consensus 223 ~~l~~~G-~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VV~A~p~~~~~~ll-~~~~~~~~~~~l~~~~~~~-~~v~ 299 (842)
+.+++.| ++|+++++|++|+.++++|.|++.+|+++.||+||+|+|+..+.+++ .+.+++...++++.+.|.+ .+++
T Consensus 263 ~~l~~~g~~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~vI~a~~~~~l~~i~~~p~lp~~~~~ai~~~~~~~~~kv~ 342 (495)
T 2vvm_A 263 EEAAGTGRLGYVFGCPVRSVVNERDAARVTARDGREFVAKRVVCTIPLNVLSTIQFSPALSTERISAMQAGHVSMCTKVH 342 (495)
T ss_dssp HHHHTTTCEEEESSCCEEEEEECSSSEEEEETTCCEEEEEEEEECCCGGGGGGSEEESCCCHHHHHHHHHCCCCCCEEEE
T ss_pred HHhhhcCceEEEeCCEEEEEEEcCCEEEEEECCCCEEEcCEEEECCCHHHHhheeeCCCCCHHHHHHHHhcCCCceeEEE
Confidence 9999888 99999999999999888999999999889999999999999998875 4446777788888888887 6899
Q ss_pred EecCCCCcC--------CCCCCcceeeecccCCCceEEEEEcccccCCCCC-----CCCeEEecCCC-CCCcc-eeEEEE
Q 035870 300 LHRDKRFMP--------QNPAAWSAWNFLESFDSKVCLTYWLNVLQNLGET-----SLPFLVTLNPD-HVPEH-TLLKWS 364 (842)
Q Consensus 300 l~~~~~~~p--------~~~~~~~~~~~~~~~~~~~~v~~~~~~l~~l~~~-----~~~~~~~l~~~-~~~~~-~~~~w~ 364 (842)
+.++.++|+ .....+ .|.....+++..++..+......+... +.+.+..+.+. ..|.. .+.+|.
T Consensus 343 l~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~vl~~~~~~~~~~~~~e~~~~~~~~L~~~~~~~~~~~~~~~~~W~ 421 (495)
T 2vvm_A 343 AEVDNKDMRSWTGIAYPFNKLCY-AIGDGTTPAGNTHLVCFGNSANHIQPDEDVRETLKAVGQLAPGTFGVKRLVFHNWV 421 (495)
T ss_dssp EEESCGGGGGEEEEECSSCSSCE-EEEEEECTTSCEEEEEEECSTTCCCTTTCHHHHHHHHHTTSTTSCCEEEEEECCTT
T ss_pred EEECCccCCCceeEecCCCCcEE-EecCCCCCCCCeEEEEEeCccccCCCHHHHHHHHHHHHHhcCCCCCceEEEEeEcC
Confidence 999887642 111111 122112244545555555432222111 11222333443 22222 344774
Q ss_pred ------cCCCCCCHHHHHH-HHhhhhhcCCCCeEEeccccC---CCCCchhHhHHHHHHHHhcCC
Q 035870 365 ------TGHPVPSVAASKA-SLELDHIQGKRGIWFCGAYQG---YGFHEDGLKAGMTAAHGVLGK 419 (842)
Q Consensus 365 ------~~~p~~~~~~~~~-~~~~~~~~~~~~l~~aG~~~g---~G~~e~A~~SG~~aA~~Il~~ 419 (842)
.+++.+.++.... .+.+ .++.++|||||+++. .|++|+|+.||+++|++|+..
T Consensus 422 ~dp~~~g~y~~~~~g~~~~~~~~l--~~p~~~l~fAGe~t~~~~~g~veGAi~SG~raA~~i~~~ 484 (495)
T 2vvm_A 422 KDEFAKGAWFFSRPGMVSECLQGL--REKHGGVVFANSDWALGWRSFIDGAIEEGTRAARVVLEE 484 (495)
T ss_dssp TCTTTSSSSCCCCTTHHHHHHHHH--HCCBTTEEECCGGGCSSSTTSHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCccCcCCCcchhhHHHH--hCcCCCEEEechhhhcCCceEEEhHHHHHHHHHHHHHHH
Confidence 2455566665432 2222 456789999999874 566699999999999999753
No 10
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=100.00 E-value=3.5e-31 Score=304.79 Aligned_cols=397 Identities=16% Similarity=0.161 Sum_probs=259.9
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCeEEEEecCCCCCCCceeEeeC-CeeeecceEeecCCCchhHHHHHHHcCCCccccc
Q 035870 1 MRVAVIGAGISGLVSAYVLAKAGVEVVLYEKDDYLGGHAKTVTFD-GVDLDLGFMVFNRVTYPNMMEFFESLGVDMEMSD 79 (842)
Q Consensus 1 kdV~IIGaGiaGLsaA~~L~~~G~~V~VlEa~~~~GG~~~s~~~~-g~~~d~G~~~~~~~~~~~~~~l~~~lGl~~~~~~ 79 (842)
+||+|||||+|||+||++|+++|++|+|||+++++||+++|.+.. |+.+|.|++++++ .++.+.++++++|++.....
T Consensus 5 ~~vvIIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GGr~~t~~~~~g~~~d~G~~~~~~-~~~~~~~l~~~lgl~~~~~~ 83 (520)
T 1s3e_A 5 CDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGGRTYTLRNQKVKYVDLGGSYVGP-TQNRILRLAKELGLETYKVN 83 (520)
T ss_dssp CSEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTCCEECCTTTSCEESSCCEECT-TCHHHHHHHHHTTCCEEECC
T ss_pred ceEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCceeecccCCCcccccCceEecC-CcHHHHHHHHHcCCcceecc
Confidence 489999999999999999999999999999999999999999985 9999999999965 47788899999999865432
Q ss_pred c-eeeEeccCCCceeeCCCCCCcchhhhhhccCChHHHHHHHHHHhhhHHHHHHHHhhcCC-----CC--CCccccHHHH
Q 035870 80 M-SFSVSLEKGHGCEWGSRNGLSSLFAQKKNVLNPYFWQMLREIIKFKDDVLGYLEELESN-----PD--IDRSETLGQF 151 (842)
Q Consensus 80 ~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~--~~~~~s~~~~ 151 (842)
. ...+.+.+|+.+.+... ++.. ..+.... ++.++.............. +. ..++.++.+|
T Consensus 84 ~~~~~~~~~~g~~~~~~~~--~p~~-------~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ 151 (520)
T 1s3e_A 84 EVERLIHHVKGKSYPFRGP--FPPV-------WNPITYL---DHNNFWRTMDDMGREIPSDAPWKAPLAEEWDNMTMKEL 151 (520)
T ss_dssp CSSEEEEEETTEEEEECSS--SCCC-------CSHHHHH---HHHHHHHHHHHHHTTSCTTCGGGSTTHHHHHTSBHHHH
T ss_pred cCCceEEEECCEEEEecCC--CCCC-------CCHHHHH---HHHHHHHHHHHHHhhcCcCCCccccchhhhhccCHHHH
Confidence 2 11222334444444321 1110 1111000 1111111111111111000 00 0146899999
Q ss_pred HHhcCCCHHHHHHHHHHhhhcccCCCchhhccCCHHHHHHHHhhccc----cccCCCCceEEecCChhHHHHHHHHHhhh
Q 035870 152 VNSRGYSELFQKAYLIPICGSIWSCPSEGVTSFSAFSVLSFCRNHHL----LQLFGRPQWLTVRWRSHSYVNKVRKQLES 227 (842)
Q Consensus 152 l~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~gG~~~l~~~L~~~l~~ 227 (842)
+++...++.. ..++.+++...++.+++++ |+..++.++...+. ........+++++||++.++++|++.+
T Consensus 152 l~~~~~~~~~-~~~~~~~~~~~~g~~~~~~---s~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~gG~~~l~~~l~~~l-- 225 (520)
T 1s3e_A 152 LDKLCWTESA-KQLATLFVNLCVTAETHEV---SALWFLWYVKQCGGTTRIISTTNGGQERKFVGGSGQVSERIMDLL-- 225 (520)
T ss_dssp HHHHCSSHHH-HHHHHHHHHHHHSSCTTTS---BHHHHHHHHHTTTCHHHHHCSTTSTTSEEETTCTHHHHHHHHHHH--
T ss_pred HHhhCCCHHH-HHHHHHHHhhhcCCChHHh---HHHHHHHHHhhcCchhhhcccCCCcceEEEeCCHHHHHHHHHHHc--
Confidence 9998766654 6788888888999888776 66666666654321 111233456889999999999999988
Q ss_pred cCceEEeCCCeeEEEeCCCcEEEEeCCCcEEeCCEEEEccChHHHHHhh-cCCCChHHHHhccccceee-ceEEEecCCC
Q 035870 228 WGCQIRTSSEVCSVLPADKGCTIVCGDGSREFYNSCVMALHAPDALKIL-GNQATFDETRILGAFQYVY-SDIFLHRDKR 305 (842)
Q Consensus 228 ~G~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VV~A~p~~~~~~ll-~~~~~~~~~~~l~~~~~~~-~~v~l~~~~~ 305 (842)
|++|++|++|++|..++++|.|++.+|+++.||+||+|+|+..+.+++ .+.++....+++.++++.+ .++++.++.+
T Consensus 226 -g~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~VI~a~p~~~l~~l~~~p~lp~~~~~~i~~~~~~~~~kv~l~~~~~ 304 (520)
T 1s3e_A 226 -GDRVKLERPVIYIDQTRENVLVETLNHEMYEAKYVISAIPPTLGMKIHFNPPLPMMRNQMITRVPLGSVIKCIVYYKEP 304 (520)
T ss_dssp -GGGEESSCCEEEEECSSSSEEEEETTSCEEEESEEEECSCGGGGGGSEEESCCCHHHHHHTTSCCBCCEEEEEEECSSC
T ss_pred -CCcEEcCCeeEEEEECCCeEEEEECCCeEEEeCEEEECCCHHHHcceeeCCCCCHHHHHHHHhCCCcceEEEEEEeCCC
Confidence 789999999999999999999999999899999999999999988875 3446677788899999988 5899999998
Q ss_pred CcCCCCC----------Ccceeeecc--cCCCceEEEEEccc-----ccCCCCC-----CCCeEEecCCC---CCCcc-e
Q 035870 306 FMPQNPA----------AWSAWNFLE--SFDSKVCLTYWLNV-----LQNLGET-----SLPFLVTLNPD---HVPEH-T 359 (842)
Q Consensus 306 ~~p~~~~----------~~~~~~~~~--~~~~~~~v~~~~~~-----l~~l~~~-----~~~~~~~l~~~---~~~~~-~ 359 (842)
+|+.... .+..+.+.. .+++...+..++.. +..+.+. +.+.+..+.+. ..|.. .
T Consensus 305 ~w~~~~~~g~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~a~~~~~~~~~e~~~~vl~~L~~~~~~~~~~~p~~~~ 384 (520)
T 1s3e_A 305 FWRKKDYCGTMIIDGEEAPVAYTLDDTKPEGNYAAIMGFILAHKARKLARLTKEERLKKLCELYAKVLGSLEALEPVHYE 384 (520)
T ss_dssp GGGGGTEEEEEEECSTTCSCSEEEECCCTTSCSCEEEEEEETHHHHHHTTSCHHHHHHHHHHHHHHHHTCGGGGCCSEEE
T ss_pred cccCCCCCceeeccCCCCceEEEeeCCCCCCCCCEEEEEccchhhhhhhcCCHHHHHHHHHHHHHHHhCccccCCccEEE
Confidence 8764321 111122221 12222444444422 1111111 11112222221 12322 4
Q ss_pred eEEEEc---CC----CCCCHHHHHHHHhhhhhcCCCCeEEecccc---CCCCCchhHhHHHHHHHHhcC
Q 035870 360 LLKWST---GH----PVPSVAASKASLELDHIQGKRGIWFCGAYQ---GYGFHEDGLKAGMTAAHGVLG 418 (842)
Q Consensus 360 ~~~w~~---~~----p~~~~~~~~~~~~~~~~~~~~~l~~aG~~~---g~G~~e~A~~SG~~aA~~Il~ 418 (842)
..+|.. .. +.+.++..... .....++.+||||||+++ ..|.+++|+.||+++|++|+.
T Consensus 385 ~~~W~~~~~~~G~~~~~~~~g~~~~~-~~~l~~p~~~L~fAG~~t~~~~~g~v~GAi~SG~~aA~~i~~ 452 (520)
T 1s3e_A 385 EKNWCEEQYSGGCYTTYFPPGILTQY-GRVLRQPVDRIYFAGTETATHWSGYMEGAVEAGERAAREILH 452 (520)
T ss_dssp EEEGGGCTTTCSSSCBCCCTTHHHHH-GGGTTCCBTTEEECSGGGCSSSTTSHHHHHHHHHHHHHHHHH
T ss_pred EEeeCCCCCCCCCCccccCCCccccc-hHHHhCCCCCEEEeehhhcCcCcEEhHHHHHHHHHHHHHHHH
Confidence 446742 11 23444443221 112245678999999976 445559999999999999975
No 11
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=99.98 E-value=1.6e-31 Score=299.95 Aligned_cols=388 Identities=15% Similarity=0.217 Sum_probs=247.6
Q ss_pred CcEEEECCChHHHHHHHHHHhCC-CeEEEEecCCCCCCCceeEeeCCeeeecceEeecCCCchhHHHHHHHcCCCccccc
Q 035870 1 MRVAVIGAGISGLVSAYVLAKAG-VEVVLYEKDDYLGGHAKTVTFDGVDLDLGFMVFNRVTYPNMMEFFESLGVDMEMSD 79 (842)
Q Consensus 1 kdV~IIGaGiaGLsaA~~L~~~G-~~V~VlEa~~~~GG~~~s~~~~g~~~d~G~~~~~~~~~~~~~~l~~~lGl~~~~~~ 79 (842)
+||+|||||++||+||++|+++| ++|+|||+++++||+++|...+|+.+|.|++++. ..++++.++++++|+......
T Consensus 7 ~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~GG~~~t~~~~G~~~d~G~~~~~-~~~~~~~~l~~~~g~~~~~~~ 85 (424)
T 2b9w_A 7 SRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHVGGKCHSPNYHGRRYEMGAIMGV-PSYDTIQEIMDRTGDKVDGPK 85 (424)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCSSTTCCCCEETTEECCSSCCCBC-TTCHHHHHHHHHHCCCCCSCC
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCCCCcccccCCCCcccccCceeec-CCcHHHHHHHHHhCCcccccc
Confidence 58999999999999999999999 9999999999999999999999999999999985 367889999999998865544
Q ss_pred ceeeEeccCCCceeeCCCCCCcchhhhhhccCChHHHHHHHHHHhhhHHHHHHHHhhc-----CCCCCCccccHHHHHHh
Q 035870 80 MSFSVSLEKGHGCEWGSRNGLSSLFAQKKNVLNPYFWQMLREIIKFKDDVLGYLEELE-----SNPDIDRSETLGQFVNS 154 (842)
Q Consensus 80 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~s~~~~l~~ 154 (842)
....+.+.+|..+.... .. .. .+.+...+. ++............ ......+..++.+|+.+
T Consensus 86 ~~~~~~~~~g~~~~~~~-~~----~~------~~~~~~~~~---~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~ 151 (424)
T 2b9w_A 86 LRREFLHEDGEIYVPEK-DP----VR------GPQVMAAVQ---KLGQLLATKYQGYDANGHYNKVHEDLMLPFDEFLAL 151 (424)
T ss_dssp CCEEEECTTSCEECGGG-CT----TH------HHHHHHHHH---HHHHHHHTTTTTTTSSSSSSCCCGGGGSBHHHHHHH
T ss_pred ccceeEcCCCCEecccc-Cc----cc------chhHHHHHH---HHHHHHhhhhhhcccccchhhhhhhhccCHHHHHHh
Confidence 44444444544321100 00 00 000111111 11111100000000 00111246899999999
Q ss_pred cCCCHHHHHHHHHHhhhcccCCCchhhccCCHHHHHHHHhhccccccCCCCceEEecCChhHHHHHHHHHhhhcCceEEe
Q 035870 155 RGYSELFQKAYLIPICGSIWSCPSEGVTSFSAFSVLSFCRNHHLLQLFGRPQWLTVRWRSHSYVNKVRKQLESWGCQIRT 234 (842)
Q Consensus 155 ~~~~~~~~~~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG~~~l~~~L~~~l~~~G~~i~~ 234 (842)
.+.+ .+.+.+..|++...|+ ++. ..|+..++.++....+.....++. +.+.+|+++++++|++.+ +.+|++
T Consensus 152 ~~~~-~~~~~~~~~~~~~~~~-~~~---~~~a~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~l~~~l~~~l---~~~v~~ 222 (424)
T 2b9w_A 152 NGCE-AARDLWINPFTAFGYG-HFD---NVPAAYVLKYLDFVTMMSFAKGDL-WTWADGTQAMFEHLNATL---EHPAER 222 (424)
T ss_dssp TTCG-GGHHHHTTTTCCCCCC-CTT---TSBHHHHHHHSCHHHHHHHHHTCC-BCCTTCHHHHHHHHHHHS---SSCCBC
T ss_pred hCcH-HHHHHHHHHHHhhccC-ChH---hcCHHHHHHhhhHhhhhcccCCce-EEeCChHHHHHHHHHHhh---cceEEc
Confidence 8765 4666677788777775 333 457777666654332211112223 368899999999999998 568999
Q ss_pred CCCeeEEEeCCCcEEEEeCCCcEEeCCEEEEccChHHHHHhhcCCCChHHHHhccccceeeceE--EEecCCC----CcC
Q 035870 235 SSEVCSVLPADKGCTIVCGDGSREFYNSCVMALHAPDALKILGNQATFDETRILGAFQYVYSDI--FLHRDKR----FMP 308 (842)
Q Consensus 235 ~~~V~~I~~~~~~v~V~~~~G~~~~ad~VV~A~p~~~~~~ll~~~~~~~~~~~l~~~~~~~~~v--~l~~~~~----~~p 308 (842)
|++|++|..++++|.|++.+| ++.||+||+|+|++.+.+++++ .+.+++.+.++.+.+..+ .+....+ +.|
T Consensus 223 ~~~V~~i~~~~~~v~v~~~~g-~~~ad~Vv~a~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (424)
T 2b9w_A 223 NVDITRITREDGKVHIHTTDW-DRESDVLVLTVPLEKFLDYSDA--DDDEREYFSKIIHQQYMVDACLVKEYPTISGYVP 299 (424)
T ss_dssp SCCEEEEECCTTCEEEEESSC-EEEESEEEECSCHHHHTTSBCC--CHHHHHHHTTCEEEEEEEEEEEESSCCSSEEECG
T ss_pred CCEEEEEEEECCEEEEEECCC-eEEcCEEEECCCHHHHhhccCC--CHHHHHHHhcCCcceeEEEEEEeccCCccccccc
Confidence 999999999988999999888 4899999999999988777653 455556677777766322 2221111 223
Q ss_pred CC----CCCcceeeecccCC--CceEEEEEcccccCCCCCC--------CCeEEecCCCCCCccee-EEEEcCCCCCCHH
Q 035870 309 QN----PAAWSAWNFLESFD--SKVCLTYWLNVLQNLGETS--------LPFLVTLNPDHVPEHTL-LKWSTGHPVPSVA 373 (842)
Q Consensus 309 ~~----~~~~~~~~~~~~~~--~~~~v~~~~~~l~~l~~~~--------~~~~~~l~~~~~~~~~~-~~w~~~~p~~~~~ 373 (842)
.+ ...|..|+....++ ...++.+..+..+.+.+.. .+.+.++++. .+..+. ..|.. +|.+...
T Consensus 300 ~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~~l~~l~~~-~~~~~~~~~w~~-~p~~~~~ 377 (424)
T 2b9w_A 300 DNMRPERLGHVMVYYHRWADDPHQIITTYLLRNHPDYADKTQEECRQMVLDDMETFGHP-VEKIIEEQTWYY-FPHVSSE 377 (424)
T ss_dssp GGGSGGGTTSCCEEEECCTTCTTSCEEEEEECCBTTBCCCCHHHHHHHHHHHHHHTTCC-EEEEEEEEEEEE-EEECCHH
T ss_pred CCCCCcCCCcceEEeeecCCCCceEEEEEeccCCCcccccChHHHHHHHHHHHHHcCCc-ccccccccceee-eeccCHH
Confidence 22 11222332222222 2344455554444332220 1123445542 122222 25654 6666654
Q ss_pred HHHH--HHhhhhhcCCCCeEEeccccCCCCCchhHhHHHHHHHHhc
Q 035870 374 ASKA--SLELDHIQGKRGIWFCGAYQGYGFHEDGLKAGMTAAHGVL 417 (842)
Q Consensus 374 ~~~~--~~~~~~~~~~~~l~~aG~~~g~G~~e~A~~SG~~aA~~Il 417 (842)
.... ..++...++.+|+||||+|++.|++|+|+.||.++|++||
T Consensus 378 ~~~~G~~~~~~~~~~~~~l~~aG~~~~~g~~e~a~~Sg~~aA~~~l 423 (424)
T 2b9w_A 378 DYKAGWYEKVEGMQGRRNTFYAGEIMSFGNFDEVCHYSKDLVTRFF 423 (424)
T ss_dssp HHHTTHHHHHHHTTTGGGEEECSGGGSCSSHHHHHHHHHHHHHHHT
T ss_pred HHhccHHHHHHHHhCCCCceEeccccccccHHHHHHHHHHHHHHhc
Confidence 3332 4455556677899999999999999999999999999986
No 12
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=99.98 E-value=1.4e-31 Score=308.32 Aligned_cols=395 Identities=15% Similarity=0.181 Sum_probs=252.5
Q ss_pred cEEEECCChHHHHHHHHHHh-CCCeEEEEecCCCCCCCceeEe-eCCeeeecceEeecCCCchhHHHHHHHcCCCcccc-
Q 035870 2 RVAVIGAGISGLVSAYVLAK-AGVEVVLYEKDDYLGGHAKTVT-FDGVDLDLGFMVFNRVTYPNMMEFFESLGVDMEMS- 78 (842)
Q Consensus 2 dV~IIGaGiaGLsaA~~L~~-~G~~V~VlEa~~~~GG~~~s~~-~~g~~~d~G~~~~~~~~~~~~~~l~~~lGl~~~~~- 78 (842)
||||||||+|||+||++|++ .|++|+|||+++++||+++|.. .+|+.+|.|+|+|+ ..++.+.+++++++......
T Consensus 12 DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~~~GG~~~T~~~~~G~~~D~G~h~~~-~~~~~v~~l~~e~~~~~~~~~ 90 (513)
T 4gde_A 12 DVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPGGLASTDVTPEGFLYDVGGHVIF-SHYKYFDDCLDEALPKEDDWY 90 (513)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCCSCEEEEESSSSCCGGGCEEECTTSCEEESSCCCCC-CCBHHHHHHHHHHSCSGGGEE
T ss_pred CEEEECCcHHHHHHHHHHHhhCCCCEEEEECCCCCcCCeeeEEecCCEEEEeCceEec-CCCHHHHHHHHHhCCccceeE
Confidence 79999999999999999997 5999999999999999999965 58999999999995 47889999999987764432
Q ss_pred c-ceeeEeccCCCceeeCCCCCCcchhhhhhccCChH-HHHHHHHHHhhhHHHHHHHHhhcCCCCCCccccHHHHHHhcC
Q 035870 79 D-MSFSVSLEKGHGCEWGSRNGLSSLFAQKKNVLNPY-FWQMLREIIKFKDDVLGYLEELESNPDIDRSETLGQFVNSRG 156 (842)
Q Consensus 79 ~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~ 156 (842)
. ......+.+|+.+.++....+. .+... .......+... .... ... .....++.+|+.+.
T Consensus 91 ~~~~~~~i~~~g~~~~~p~~~~~~--------~~~~~~~~~~~~~~~~~------~~~~-~~~--~~~~~s~~~~~~~~- 152 (513)
T 4gde_A 91 THQRISYVRCQGQWVPYPFQNNIS--------MLPKEEQVKCIDGMIDA------ALEA-RVA--NTKPKTFDEWIVRM- 152 (513)
T ss_dssp EEECCEEEEETTEEEESSGGGGGG--------GSCHHHHHHHHHHHHHH------HHHH-HTC--CSCCCSHHHHHHHH-
T ss_pred EecCceEEEECCeEeecchhhhhh--------hcchhhHHHHHHHHHHH------HHhh-hcc--cccccCHHHHHHHh-
Confidence 1 1122233455555543211111 11111 11111111111 1111 111 12578999999887
Q ss_pred CCHHHHHHHHHHhhhcccCCCchhhccC---------CHHHHHH-HHhhcccc-ccCCCCceEEecCChhHHHHHHHHHh
Q 035870 157 YSELFQKAYLIPICGSIWSCPSEGVTSF---------SAFSVLS-FCRNHHLL-QLFGRPQWLTVRWRSHSYVNKVRKQL 225 (842)
Q Consensus 157 ~~~~~~~~~~~p~~~~~~~~~~~~l~~~---------~~~~~~~-~~~~~~~~-~~~~~~~~~~~~gG~~~l~~~L~~~l 225 (842)
+++.+.+.++.|+..++|+.++++++.. +...... .+...... .......++.++||+++++++|++.+
T Consensus 153 ~g~~l~~~~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG~~~l~~~l~~~l 232 (513)
T 4gde_A 153 MGTGIADLFMRPYNFKVWAVPTTKMQCAWLGERVAAPNLKAVTTNVILGKTAGNWGPNATFRFPARGGTGGIWIAVANTL 232 (513)
T ss_dssp HHHHHHHHTHHHHHHHHHSSCGGGBCSGGGCSSCCCCCHHHHHHHHHHTCCCCSCBTTBEEEEESSSHHHHHHHHHHHTS
T ss_pred hhhhhhhhhcchhhhhhccCChHHhhHHHHHHhhcccchhhhhhhhhhcccccccccccceeecccCCHHHHHHHHHHHH
Confidence 7888899999999999999999887432 1111111 11111111 11122344566899999999999999
Q ss_pred hhcCceEEeCCCeeEEEeCCCcEEEEeCCCcEEeCCEEEEccChHHHHHhhcCCCChHHHHhccccceeec-eEEEecCC
Q 035870 226 ESWGCQIRTSSEVCSVLPADKGCTIVCGDGSREFYNSCVMALHAPDALKILGNQATFDETRILGAFQYVYS-DIFLHRDK 304 (842)
Q Consensus 226 ~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VV~A~p~~~~~~ll~~~~~~~~~~~l~~~~~~~~-~v~l~~~~ 304 (842)
++.|++|++|++|++|..++++ |++.+|+++.||+||+|+|...+.+++++ .....+...++|.+. .+.+.++.
T Consensus 233 ~~~g~~i~~~~~V~~I~~~~~~--v~~~~G~~~~ad~vI~t~P~~~l~~~l~~---~~~~~~~~~l~y~~~~~v~l~~~~ 307 (513)
T 4gde_A 233 PKEKTRFGEKGKVTKVNANNKT--VTLQDGTTIGYKKLVSTMAVDFLAEAMND---QELVGLTKQLFYSSTHVIGVGVRG 307 (513)
T ss_dssp CGGGEEESGGGCEEEEETTTTE--EEETTSCEEEEEEEEECSCHHHHHHHTTC---HHHHHHHTTCCEEEEEEEEEEEES
T ss_pred HhcCeeeecceEEEEEEccCCE--EEEcCCCEEECCEEEECCCHHHHHHhcCc---hhhHhhhhcccCCceEEEEEEEec
Confidence 9999999999999999988774 56789999999999999999999999874 345666778899884 55565543
Q ss_pred CCc-----------CCCCCCc------ceeeecccCCCceEE-E-EEcc------------------------cccCCCC
Q 035870 305 RFM-----------PQNPAAW------SAWNFLESFDSKVCL-T-YWLN------------------------VLQNLGE 341 (842)
Q Consensus 305 ~~~-----------p~~~~~~------~~~~~~~~~~~~~~v-~-~~~~------------------------~l~~l~~ 341 (842)
... |+....+ ..|.....|++...+ + .+.. .+..+.+
T Consensus 308 ~~~~~~~~~~~~y~~~~~~~f~Ri~~~~n~sp~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 387 (513)
T 4gde_A 308 SRPERIGDKCWLYFPEDNCPFYRATIFSNYSPYNQPEASAALPTMQLADGSRPQSTEAKEGPYWSIMLEVSESSMKPVNQ 387 (513)
T ss_dssp SCCTTTTTCCEEECCSTTCSCSEEECGGGTCGGGSCCTTCCEECCEETTSCCCSCCSEECCCEEEEEEEEEEBTTBCCCT
T ss_pred cccccccccceeeccCCCCceeEEEecCCCCcccCCCCCceEEEEEeccCCCcccccCCcceEEEEEecccchhccCCCH
Confidence 211 1111111 111111112221111 0 1110 0111111
Q ss_pred C-----CCCeEEecCCCCCCcc----eeEEEEcCCCCCCHHHHHHHHhhhhhcCCCCeEEeccccCCCC----CchhHhH
Q 035870 342 T-----SLPFLVTLNPDHVPEH----TLLKWSTGHPVPSVAASKASLELDHIQGKRGIWFCGAYQGYGF----HEDGLKA 408 (842)
Q Consensus 342 ~-----~~~~~~~l~~~~~~~~----~~~~w~~~~p~~~~~~~~~~~~~~~~~~~~~l~~aG~~~g~G~----~e~A~~S 408 (842)
. ..+.+..+......+. .+.+|++++|+|+.++......+.+....+|||++|.+..+-+ ++.|++|
T Consensus 388 e~l~~~~~~~L~~~~~i~~~~~i~~~~v~r~~~ayP~y~~~~~~~~~~~~~~l~~~~l~~~GR~g~~~Y~~~n~D~a~~~ 467 (513)
T 4gde_A 388 ETILADCIQGLVNTEMLKPTDEIVSTYHRRFDHGYPTPTLEREGTLTQILPKLQDKDIWSRGRFGSWRYEVGNQDHSFML 467 (513)
T ss_dssp TTHHHHHHHHHHHTTSSCTTCEEEEEEEEEEEEEEECCBTTHHHHHHHHHHHHHHTTEEECSTTTTCCGGGCSHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCccceEEEEEEECCCeecccCHhHHHHHHHHHHHHhhcCcEEecCCcccCcCCCCHHHHHHH
Confidence 1 0111222222222221 4568999999999999988877766222369999997554332 3889999
Q ss_pred HHHHHHHhcCCc
Q 035870 409 GMTAAHGVLGKS 420 (842)
Q Consensus 409 G~~aA~~Il~~~ 420 (842)
|+.||+.|+...
T Consensus 468 g~~aa~~I~~g~ 479 (513)
T 4gde_A 468 GVEAVDNIVNGA 479 (513)
T ss_dssp HHHHHHHHHHCC
T ss_pred HHHHHHHHHcCC
Confidence 999999999643
No 13
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=99.97 E-value=2.2e-31 Score=305.66 Aligned_cols=398 Identities=19% Similarity=0.234 Sum_probs=255.8
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCeEEEEecCCCCCCCceeEeeCCeeeecceEeecCCCchhHHHHHHHcCCCcccccc
Q 035870 1 MRVAVIGAGISGLVSAYVLAKAGVEVVLYEKDDYLGGHAKTVTFDGVDLDLGFMVFNRVTYPNMMEFFESLGVDMEMSDM 80 (842)
Q Consensus 1 kdV~IIGaGiaGLsaA~~L~~~G~~V~VlEa~~~~GG~~~s~~~~g~~~d~G~~~~~~~~~~~~~~l~~~lGl~~~~~~~ 80 (842)
+||+|||||++||+||++|+++|++|+|||+++++||+++|...+|+.+|.|++++.. .++.+.++++++|+.......
T Consensus 14 ~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~~g~~~~~g~~~~~~-~~~~~~~~~~~lgl~~~~~~~ 92 (504)
T 1sez_A 14 KRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAGGKLRSVSQDGLIWDEGANTMTE-SEGDVTFLIDSLGLREKQQFP 92 (504)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSSCSSCCEEEETTEEEESSCCCBCC-CSHHHHHHHHHTTCGGGEECC
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCCCCceeeeccCCeEEecCCccccc-CcHHHHHHHHHcCCcccceec
Confidence 4899999999999999999999999999999999999999999999999999999953 678899999999997653211
Q ss_pred ---eeeEeccCCCceeeCCCCCCcchhhhhhccCChHHHHHHHHHHhhhHHHHHHHHhhcC-CCCCCccccHHHHHHhcC
Q 035870 81 ---SFSVSLEKGHGCEWGSRNGLSSLFAQKKNVLNPYFWQMLREIIKFKDDVLGYLEELES-NPDIDRSETLGQFVNSRG 156 (842)
Q Consensus 81 ---~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~l~~~~ 156 (842)
...+.+.+|+.+.++. ....+.. ...+... ..+.... . .+...... .....++.|+.+|++++
T Consensus 93 ~~~~~~~~~~~g~~~~~p~--~~~~~~~--~~~~~~~--~~~~~~~---~---~~~~~~~~~~~~~~~~~s~~~~l~~~- 159 (504)
T 1sez_A 93 LSQNKRYIARNGTPVLLPS--NPIDLIK--SNFLSTG--SKLQMLL---E---PILWKNKKLSQVSDSHESVSGFFQRH- 159 (504)
T ss_dssp SSCCCEEEESSSSEEECCS--SHHHHHH--SSSSCHH--HHHHHHT---H---HHHC----------CCCBHHHHHHHH-
T ss_pred cCCCceEEEECCeEEECCC--CHHHHhc--cccCCHH--HHHHHhH---h---hhccCcccccccCCCCccHHHHHHHH-
Confidence 1122334444433321 1101100 0111110 0010000 0 00000000 00012568999999987
Q ss_pred CCHHHHHHHHHHhhhcccCCCchhhccCCHHHHHHHHhh-cc---------ccc---------------cCCCCceEEec
Q 035870 157 YSELFQKAYLIPICGSIWSCPSEGVTSFSAFSVLSFCRN-HH---------LLQ---------------LFGRPQWLTVR 211 (842)
Q Consensus 157 ~~~~~~~~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~---------~~~---------------~~~~~~~~~~~ 211 (842)
+++.+.+.++.|++.++|+.++++++.......+..+.. .+ ... .......++++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (504)
T 1sez_A 160 FGKEVVDYLIDPFVAGTCGGDPDSLSMHHSFPELWNLEKRFGSVILGAIRSKLSPKNEKKQGPPKTSANKKRQRGSFSFL 239 (504)
T ss_dssp HCHHHHHTTHHHHHHHHHSCCGGGSBHHHHCHHHHHHHHHTSCHHHHHHHHTTC----------CCCSCCSTTCSCBEET
T ss_pred cCHHHHHHHHHHHHccccCCChHHhhHHHHhHHHHHHHHHhCCHHHHHHHhhhcccccccccccchhhccccCCceEeeC
Confidence 788889999999999999999988743221111111110 00 000 00123577899
Q ss_pred CChhHHHHHHHHHhhhcCceEEeCCCeeEEEeCCCc------EEEEeC--CC---cEEeCCEEEEccChHHHHHhhc---
Q 035870 212 WRSHSYVNKVRKQLESWGCQIRTSSEVCSVLPADKG------CTIVCG--DG---SREFYNSCVMALHAPDALKILG--- 277 (842)
Q Consensus 212 gG~~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~------v~V~~~--~G---~~~~ad~VV~A~p~~~~~~ll~--- 277 (842)
||+++|+++|++.+.+ ++|++|++|++|..++++ +.|++. +| +++.||+||+|+|+..+.+++.
T Consensus 240 GG~~~l~~~l~~~l~~--~~i~~~~~V~~I~~~~~~~~~~~~~~v~~~~~~g~~~~~~~ad~VI~a~p~~~l~~ll~~~~ 317 (504)
T 1sez_A 240 GGMQTLTDAICKDLRE--DELRLNSRVLELSCSCTEDSAIDSWSIISASPHKRQSEEESFDAVIMTAPLCDVKSMKIAKR 317 (504)
T ss_dssp TCTHHHHHHHHTTSCT--TTEETTCCEEEEEEECSSSSSSCEEEEEEBCSSSSCBCCCEESEEEECSCHHHHHTSEEESS
T ss_pred cHHHHHHHHHHhhccc--ceEEcCCeEEEEEecCCCCcccceEEEEEcCCCCccceeEECCEEEECCCHHHHHHHhhccc
Confidence 9999999999998831 799999999999998877 777664 45 5789999999999999999883
Q ss_pred -CCCChHHHHhccccceee-ceEEEecCCCCcCCCCC--------------------Ccceeeecc-cCCCceEEEEEcc
Q 035870 278 -NQATFDETRILGAFQYVY-SDIFLHRDKRFMPQNPA--------------------AWSAWNFLE-SFDSKVCLTYWLN 334 (842)
Q Consensus 278 -~~~~~~~~~~l~~~~~~~-~~v~l~~~~~~~p~~~~--------------------~~~~~~~~~-~~~~~~~v~~~~~ 334 (842)
++.++ +.+..+.|.+ .++++.++.+.|+.... .|.+..++. .|++..+++.++.
T Consensus 318 ~~~~~~---~~l~~~~~~~~~~v~l~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~s~~~~~~~p~g~~~l~~~~~ 394 (504)
T 1sez_A 318 GNPFLL---NFIPEVDYVPLSVVITTFKRENVKYPLEGFGVLVPSKEQQHGLKTLGTLFSSMMFPDRAPNNVYLYTTFVG 394 (504)
T ss_dssp SSBCCC---TTSCCCCEEEEEEEEEEEEGGGBSSCCCSSEEECCGGGGGGTCCSSEEEEHHHHCGGGSCTTEEEEEEEEE
T ss_pred CCcccH---HHHhcCCCCceEEEEEEEchhhcCCCCCceEEEcCCCCCCCCCccceEEeeccccCCcCCCCCEEEEEEeC
Confidence 11222 2267788877 57788888766543210 111112222 2455666666654
Q ss_pred ccc-----CCCCC-----CCCeEEec-CCCCCCcc-eeEEEEcCCCCCCHHHHHHHHhhhh-hcCCCCeEEeccccC-CC
Q 035870 335 VLQ-----NLGET-----SLPFLVTL-NPDHVPEH-TLLKWSTGHPVPSVAASKASLELDH-IQGKRGIWFCGAYQG-YG 400 (842)
Q Consensus 335 ~l~-----~l~~~-----~~~~~~~l-~~~~~~~~-~~~~w~~~~p~~~~~~~~~~~~~~~-~~~~~~l~~aG~~~g-~G 400 (842)
... .+.+. +.+.+..+ +....|.. .+.+|...+|.|.+++......+.. .++.+||||||+++. .+
T Consensus 395 g~~~~~~~~~~~ee~~~~v~~~L~~~~g~~~~p~~~~~~~w~~~~p~~~~g~~~~~~~~~~~~~~~~~l~~aG~~~~g~~ 474 (504)
T 1sez_A 395 GSRNRELAKASRTELKEIVTSDLKQLLGAEGEPTYVNHLYWSKAFPLYGHNYDSVLDAIDKMEKNLPGLFYAGNHRGGLS 474 (504)
T ss_dssp STTCGGGTTCCHHHHHHHHHHHHHHHHCBCSCCSSEEEEEEEEEEECCCTTHHHHHHHHHHHHHHSTTEEECCSSSSCSS
T ss_pred CCCcccccCCCHHHHHHHHHHHHHHHhCCCCCCeEEEEeECCCCCCccCcCHHHHHHHHHHHHHhCCCEEEEeecCCCCC
Confidence 211 11110 11112222 22223333 5669999999999988766555443 456789999999774 44
Q ss_pred CCchhHhHHHHHHHHhcC
Q 035870 401 FHEDGLKAGMTAAHGVLG 418 (842)
Q Consensus 401 ~~e~A~~SG~~aA~~Il~ 418 (842)
+ ++|+.||.++|++|+.
T Consensus 475 v-~gai~sG~~aA~~il~ 491 (504)
T 1sez_A 475 V-GKALSSGCNAADLVIS 491 (504)
T ss_dssp H-HHHHHHHHHHHHHHHH
T ss_pred H-HHHHHHHHHHHHHHHH
Confidence 5 9999999999999975
No 14
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=99.97 E-value=8.9e-31 Score=293.34 Aligned_cols=380 Identities=14% Similarity=0.133 Sum_probs=241.5
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCeEEEEecCCCCCCCceeEeeCCeeeecceEeecC-CCchhHHHHHHHcCCCccccc
Q 035870 1 MRVAVIGAGISGLVSAYVLAKAGVEVVLYEKDDYLGGHAKTVTFDGVDLDLGFMVFNR-VTYPNMMEFFESLGVDMEMSD 79 (842)
Q Consensus 1 kdV~IIGaGiaGLsaA~~L~~~G~~V~VlEa~~~~GG~~~s~~~~g~~~d~G~~~~~~-~~~~~~~~l~~~lGl~~~~~~ 79 (842)
|||+|||||++||+||++|+++|++|+|||+++++||++++...+|+.+|.|++++.+ ...+.+.++++++|+......
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~GG~~~~~~~~g~~~d~G~~~~~~~~~~~~~~~l~~~lg~~~~~~~ 80 (421)
T 3nrn_A 1 MRAVVVGAGLGGLLAGAFLARNGHEIIVLEKSAMIGGRFTNLPYKGFQLSTGALHMIPHGEDGPLAHLLRILGAKVEIVN 80 (421)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSSEEEETTEEEESSSCSEETTTTSSHHHHHHHHHTCCCCEEE
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCCCceeEEeccCCEEEecCCeEEEccCCChHHHHHHHHhCCcceEEE
Confidence 7999999999999999999999999999999999999999999999999999866533 245677899999998754332
Q ss_pred ce--eeEeccCCCceeeCCCCCCcchhhhhhccCChHHHHHHHHHHhhhHHHHHHHHhhcCCCCCCccccHHHHHHhcCC
Q 035870 80 MS--FSVSLEKGHGCEWGSRNGLSSLFAQKKNVLNPYFWQMLREIIKFKDDVLGYLEELESNPDIDRSETLGQFVNSRGY 157 (842)
Q Consensus 80 ~~--~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~ 157 (842)
.. ..+. .+|+.+.++.. ...+.+. ....+.++.... ... ... .++.++.+|+.+.++
T Consensus 81 ~~~~~~~~-~~g~~~~~~~~----------~~~l~~~---~~~~~~~~~~~~----~~~-~~~--~~~~s~~~~l~~~g~ 139 (421)
T 3nrn_A 81 SNPKGKIL-WEGKIFHYRES----------WKFLSVK---EKAKALKLLAEI----RMN-KLP--KEEIPADEWIKEKIG 139 (421)
T ss_dssp CSSSCEEE-ETTEEEEGGGG----------GGGCC-----------CCHHHH----HTT-CCC--CCCSBHHHHHHHHTC
T ss_pred CCCCeEEE-ECCEEEEcCCc----------hhhCCHh---HHHHHHHHHHHH----Hhc-cCC--CCCCCHHHHHHHhcC
Confidence 11 1122 24443333221 1111111 001111111000 000 111 145899999999867
Q ss_pred CHHHHHHHHHHhhhcccCCCchhhccCCHHHHHHHHhhccccccCCCCceEEecCChhHHHHHHHHHhhhcCceEEeCCC
Q 035870 158 SELFQKAYLIPICGSIWSCPSEGVTSFSAFSVLSFCRNHHLLQLFGRPQWLTVRWRSHSYVNKVRKQLESWGCQIRTSSE 237 (842)
Q Consensus 158 ~~~~~~~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG~~~l~~~L~~~l~~~G~~i~~~~~ 237 (842)
++...+.++.|+....++.++.++ ++..+...+.... ....+++++||++.++++|++.++++|++|+++++
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~-----~~~g~~~~~gG~~~l~~~l~~~~~~~G~~i~~~~~ 211 (421)
T 3nrn_A 140 ENEFLLSVLESFAGWADSVSLSDL---TALELAKEIRAAL-----RWGGPGLIRGGCKAVIDELERIIMENKGKILTRKE 211 (421)
T ss_dssp CCHHHHHHHHHHHHHHHSSCGGGS---BHHHHHHHHHHHH-----HHCSCEEETTCHHHHHHHHHHHHHTTTCEEESSCC
T ss_pred CcHHHHHHHHHHHHHhcCCCcccC---CHHHHHHHHHHHh-----hcCCcceecCCHHHHHHHHHHHHHHCCCEEEcCCe
Confidence 777778888999999999988887 4433333222110 01345689999999999999999999999999999
Q ss_pred eeEEEeCCCcEEEEeCCCcEEeCCEEEEccChHHHHHhhc-CCCChHHHHhccccceee-ceEEEecCCCCcCC------
Q 035870 238 VCSVLPADKGCTIVCGDGSREFYNSCVMALHAPDALKILG-NQATFDETRILGAFQYVY-SDIFLHRDKRFMPQ------ 309 (842)
Q Consensus 238 V~~I~~~~~~v~V~~~~G~~~~ad~VV~A~p~~~~~~ll~-~~~~~~~~~~l~~~~~~~-~~v~l~~~~~~~p~------ 309 (842)
|++|..++++| | +.+|+++.||+||+|+|++.+.++++ +..++...+.+.++.+.+ .++.+.++.+..+.
T Consensus 212 V~~i~~~~~~v-V-~~~g~~~~ad~Vv~a~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~~~ 289 (421)
T 3nrn_A 212 VVEINIEEKKV-Y-TRDNEEYSFDVAISNVGVRETVKLIGRDYFDRDYLKQVDSIEPSEGIKFNLAVPGEPRIGNTIVFT 289 (421)
T ss_dssp EEEEETTTTEE-E-ETTCCEEECSEEEECSCHHHHHHHHCGGGSCHHHHHHHHTCCCCCEEEEEEEEESSCSSCSSEEEC
T ss_pred EEEEEEECCEE-E-EeCCcEEEeCEEEECCCHHHHHHhcCcccCCHHHHHHHhCCCCCceEEEEEEEcCCcccCCeEEEc
Confidence 99999998888 6 45677899999999999999999997 335556677788888876 46677776653322
Q ss_pred -CCC----Ccce-eeecccCCCceEEEEEc--cccc--CCCCCCCCeEEecCCCCCCcc-eeEEEEcCCCCCCHHHHHHH
Q 035870 310 -NPA----AWSA-WNFLESFDSKVCLTYWL--NVLQ--NLGETSLPFLVTLNPDHVPEH-TLLKWSTGHPVPSVAASKAS 378 (842)
Q Consensus 310 -~~~----~~~~-~~~~~~~~~~~~v~~~~--~~l~--~l~~~~~~~~~~l~~~~~~~~-~~~~w~~~~p~~~~~~~~~~ 378 (842)
+.. .+.+ +.-...|++...+.... .... ++.+...+.+..+.| .... .+.+|...+|.+......
T Consensus 290 ~~~~~~~i~~~s~~~p~~ap~G~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~p--~~~~~~~~~~~~~~p~~~~~~~~-- 365 (421)
T 3nrn_A 290 PGLMINGFNEPSALDKSLAREGYTLIMAHMALKNGNVKKAIEKGWEELLEIFP--EGEPLLAQVYRDGNPVNRTRAGL-- 365 (421)
T ss_dssp TTSSSCEEECGGGTCGGGSCTTEEEEEEEEECTTCCHHHHHHHHHHHHHHHCT--TCEEEEEEEC---------------
T ss_pred CCcceeeEeccCCCCCCcCCCCceEEEEEEeeccccHHHHHHHHHHHHHHHcC--CCeEEEeeeccCCCCcccccCCC--
Confidence 111 0111 00011245555444322 1110 111111222333344 2222 456788888888543322
Q ss_pred HhhhhhcCCCCeEEeccccCCC-CC--chhHhHHHHHHHHhcCC
Q 035870 379 LELDHIQGKRGIWFCGAYQGYG-FH--EDGLKAGMTAAHGVLGK 419 (842)
Q Consensus 379 ~~~~~~~~~~~l~~aG~~~g~G-~~--e~A~~SG~~aA~~Il~~ 419 (842)
.+. .++ +|||+||||+..+ .. |+|+.||++||++| |.
T Consensus 366 -~~~-~~~-~gl~laGd~~~~~~g~~~~ga~~sg~~aA~~l-~~ 405 (421)
T 3nrn_A 366 -HIE-WPL-NEVLVVGDGYRPPGGIEVDGIALGVMKALEKL-NL 405 (421)
T ss_dssp -CCC-CCC-SSEEECSTTCCCTTCCHHHHHHHHHHHHHHHT-TS
T ss_pred -CCC-CCC-CcEEEECCcccCCCceeeehHHHHHHHHHHHh-Cc
Confidence 233 566 9999999987444 34 99999999999999 53
No 15
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=99.97 E-value=3e-30 Score=292.08 Aligned_cols=398 Identities=16% Similarity=0.129 Sum_probs=251.9
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCeEEEEecCCCCCCCceeEeeCCeeeecceEeecCCCchhHHHHHHHcCCCcccccc
Q 035870 1 MRVAVIGAGISGLVSAYVLAKAGVEVVLYEKDDYLGGHAKTVTFDGVDLDLGFMVFNRVTYPNMMEFFESLGVDMEMSDM 80 (842)
Q Consensus 1 kdV~IIGaGiaGLsaA~~L~~~G~~V~VlEa~~~~GG~~~s~~~~g~~~d~G~~~~~~~~~~~~~~l~~~lGl~~~~~~~ 80 (842)
+||+|||||++||+||++|+++|++|+|||+++++||+++|...+|+.+|.|+++++. .++.+.++++++|+.......
T Consensus 6 ~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~~g~~~~~g~~~~~~-~~~~~~~~~~~~g~~~~~~~~ 84 (453)
T 2yg5_A 6 RDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRVGGRTWTDTIDGAVLEIGGQWVSP-DQTALISLLDELGLKTFERYR 84 (453)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTCCEEEETTEEEECSCCCBCT-TCHHHHHHHHHTTCCEEECCC
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCCCCceeccccCCceeccCCeEecC-ccHHHHHHHHHcCCccccccc
Confidence 3899999999999999999999999999999999999999999999999999999864 477888999999998654321
Q ss_pred e-eeEeccC-CCceeeCCCCCCcchhhhhhccCChHHHHHHHHHHhhhHHHHHHHHh--hcCCCC--CCccccHHHHHHh
Q 035870 81 S-FSVSLEK-GHGCEWGSRNGLSSLFAQKKNVLNPYFWQMLREIIKFKDDVLGYLEE--LESNPD--IDRSETLGQFVNS 154 (842)
Q Consensus 81 ~-~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~--~~~~~s~~~~l~~ 154 (842)
. ..+.+.+ ++.+.+.+... . +.+.....+................ ....+. ..+..|+.+|+.+
T Consensus 85 ~~~~~~~~~~g~~~~~~~~~~--~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~ 154 (453)
T 2yg5_A 85 EGESVYISSAGERTRYTGDSF--P--------TNETTKKEMDRLIDEMDDLAAQIGAEEPWAHPLARDLDTVSFKQWLIN 154 (453)
T ss_dssp CSEEEEECTTSCEEEECSSSC--S--------CCHHHHHHHHHHHHHHHHHHHHHCSSCGGGSTTHHHHHSSBHHHHHHH
T ss_pred CCCEEEEeCCCceeeccCCCC--C--------CChhhHHHHHHHHHHHHHHHhhcCCCCCCCCcchhhhhhccHHHHHHh
Confidence 1 1222222 44444433110 0 0111000111111100011111100 000000 0146899999999
Q ss_pred cCCCHHHHHHHHHHhhhcccCCCch-hhccCCHHHHHHHHhhcccc-cc--CCCCceEEecCChhHHHHHHHHHhhhcCc
Q 035870 155 RGYSELFQKAYLIPICGSIWSCPSE-GVTSFSAFSVLSFCRNHHLL-QL--FGRPQWLTVRWRSHSYVNKVRKQLESWGC 230 (842)
Q Consensus 155 ~~~~~~~~~~~~~p~~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~gG~~~l~~~L~~~l~~~G~ 230 (842)
.+.++.+ ..++.+++...++.+++ ++ |+..++.++...+.. .. .....+++++||++.++++|++.+ |+
T Consensus 155 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~---s~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gG~~~l~~~l~~~l---g~ 227 (453)
T 2yg5_A 155 QSDDAEA-RDNIGLFIAGGMLTKPAHSF---SALQAVLMAASAGSFSHLVDEDFILDKRVIGGMQQVSIRMAEAL---GD 227 (453)
T ss_dssp HCSCHHH-HHHHHHHHCCCCCCSCTTSS---BHHHHHHHHHHTTCHHHHHCHHHHTCEEETTCTHHHHHHHHHHH---GG
T ss_pred hcCCHHH-HHHHHHHHHhhcccCCcccc---cHHHHHHHhccCCcHhhhccCCCcceEEEcCChHHHHHHHHHhc---CC
Confidence 8766654 45788888888888877 66 566665555432100 00 011246889999999999999988 78
Q ss_pred eEEeCCCeeEEEeCCCc-EEEEeCCCcEEeCCEEEEccChHHHHHhh-cCCCChHHHHhccccceee-ceEEEecCCCCc
Q 035870 231 QIRTSSEVCSVLPADKG-CTIVCGDGSREFYNSCVMALHAPDALKIL-GNQATFDETRILGAFQYVY-SDIFLHRDKRFM 307 (842)
Q Consensus 231 ~i~~~~~V~~I~~~~~~-v~V~~~~G~~~~ad~VV~A~p~~~~~~ll-~~~~~~~~~~~l~~~~~~~-~~v~l~~~~~~~ 307 (842)
+|++|++|++|..++++ |.|++ +|+++.||+||+|+|+.++.+++ .+.+++...++++++++.+ .++++.++.++|
T Consensus 228 ~i~~~~~V~~i~~~~~~~v~v~~-~~~~~~ad~VI~a~p~~~~~~l~~~p~lp~~~~~~i~~~~~~~~~kv~l~~~~~~w 306 (453)
T 2yg5_A 228 DVFLNAPVRTVKWNESGATVLAD-GDIRVEASRVILAVPPNLYSRISYDPPLPRRQHQMHQHQSLGLVIKVHAVYETPFW 306 (453)
T ss_dssp GEECSCCEEEEEEETTEEEEEET-TTEEEEEEEEEECSCGGGGGGSEEESCCCHHHHHHGGGEEECCEEEEEEEESSCGG
T ss_pred cEEcCCceEEEEEeCCceEEEEE-CCeEEEcCEEEEcCCHHHHhcCEeCCCCCHHHHHHHhcCCCcceEEEEEEECCCCC
Confidence 99999999999999888 88887 67789999999999999988875 3446677788889999888 688899998877
Q ss_pred CCCCC--------Ccceeeecc-cCCC-ceEEEEEccc-----ccCCCC-----CCCCeEEecCCCC--CCcc-eeEEEE
Q 035870 308 PQNPA--------AWSAWNFLE-SFDS-KVCLTYWLNV-----LQNLGE-----TSLPFLVTLNPDH--VPEH-TLLKWS 364 (842)
Q Consensus 308 p~~~~--------~~~~~~~~~-~~~~-~~~v~~~~~~-----l~~l~~-----~~~~~~~~l~~~~--~~~~-~~~~w~ 364 (842)
+.... .+..+.+.. .+++ ..++..++.. +..+.+ .+.+.+..+.+.. .|.. ...+|.
T Consensus 307 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~~~~~~~~~p~~~~~~~W~ 386 (453)
T 2yg5_A 307 REDGLSGTGFGASEVVQEVYDNTNHEDDRGTLVAFVSDEKADAMFELSAEERKATILASLARYLGPKAEEPVVYYESDWG 386 (453)
T ss_dssp GGGTEEEEEECTTSSSCEEEECCCTTCSSEEEEEEEEHHHHHHHHHSCHHHHHHHHHHHHHHHHCGGGGCCSEEEECCTT
T ss_pred CCCCCCceeecCCCCeEEEEeCCCCCCCCCEEEEEeccHHHHHHhcCCHHHHHHHHHHHHHHHhCccCCCccEEEEeecC
Confidence 54310 011122222 2222 3445444421 111111 1111111222211 2222 334664
Q ss_pred c---CC----CCCCHHHHHHHHhhhhhcCCCCeEEecccc---CCCCCchhHhHHHHHHHHhcC
Q 035870 365 T---GH----PVPSVAASKASLELDHIQGKRGIWFCGAYQ---GYGFHEDGLKAGMTAAHGVLG 418 (842)
Q Consensus 365 ~---~~----p~~~~~~~~~~~~~~~~~~~~~l~~aG~~~---g~G~~e~A~~SG~~aA~~Il~ 418 (842)
. .. +.+.++...... ....++.+||||||+++ +.|.+++|+.||+++|++|+.
T Consensus 387 ~~~~~~G~~~~~~~~g~~~~~~-~~~~~p~~~l~~aG~~~~~~~~g~v~gA~~SG~~aA~~i~~ 449 (453)
T 2yg5_A 387 SEEWTRGCYAASFDLGGLHRYG-ADSRTPVGPIHFSCSDIAAEGYQHVDGAVRMGQRTAADIIA 449 (453)
T ss_dssp TCTTTCSSSCEEECTTHHHHHG-GGTTCCBTTEEECCGGGCSTTTTSHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCcCcCCCCccccch-HHHhCCcCceEEeecccccccccchHHHHHHHHHHHHHHHH
Confidence 2 21 233444332211 12255779999999976 456569999999999999974
No 16
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.97 E-value=6.7e-30 Score=268.52 Aligned_cols=243 Identities=16% Similarity=0.229 Sum_probs=190.6
Q ss_pred HhhhhhhhhhcCChHHHHhccCCCCcccccccCCCc--ccHHHHHHHHHHHHHHHcCCCCCCeEEEeccCchHHHHHHHH
Q 035870 572 QARRNISRHYDLSNELFSLFLDESMTYSCAVFKSED--EDLKAAQMRKVSLLIEKARVSKGQEVLEIGCGWGTLAIEIVK 649 (842)
Q Consensus 572 ~~~~~i~~~Yd~~~~~~~~~l~~~~~ys~~~~~~~~--~~l~~aq~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~la~ 649 (842)
.+.+++++|||..+++|+.++++.++ ++||.... .++.+++.+..+.+++.+.+.++.+|||||||+|.++..+++
T Consensus 4 p~~~~~~~~Yd~~~~~y~~~~~~~~~--~~y~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~ 81 (273)
T 3bus_A 4 PTPEEVRQMYDDFTDPFARIWGENLH--FGYWEDAGADVSVDDATDRLTDEMIALLDVRSGDRVLDVGCGIGKPAVRLAT 81 (273)
T ss_dssp -------------------CCGGGCC--CCCCCCSSCCCCHHHHHHHHHHHHHHHSCCCTTCEEEEESCTTSHHHHHHHH
T ss_pred CcHHHHHHHHcchHHHHHHHcCCCce--EEecCCCccccCHHHHHHHHHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHH
Confidence 45778999999999999999998764 58997766 689999999999999999999999999999999999999998
Q ss_pred hcCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCc-cCCCccEEEEcchhhhcChhhHHHHHHHHHhccccC
Q 035870 650 RTGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLA-KANKYDRIISCEMIEAVGHEFMEEFFGCCESLLAED 728 (842)
Q Consensus 650 ~~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~-~~~~fD~i~s~~~~~~~~~~~~~~~~~~~~~~Lkpg 728 (842)
..+++|+|+|+|+.+++.|++++...++.++++++++|+.+++ ++++||+|+++.+++|+++ ...++++++++||||
T Consensus 82 ~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~--~~~~l~~~~~~L~pg 159 (273)
T 3bus_A 82 ARDVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDLPFEDASFDAVWALESLHHMPD--RGRALREMARVLRPG 159 (273)
T ss_dssp HSCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCSCTTCEEEEEEESCTTTSSC--HHHHHHHHHTTEEEE
T ss_pred hcCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCCCCCCCccEEEEechhhhCCC--HHHHHHHHHHHcCCC
Confidence 7789999999999999999999999998889999999999987 6689999999999999977 789999999999999
Q ss_pred cEEEEEeecCCCcccccccCccchhhh--cccCCCCCCCHHHHHHHHhhcCCcEEEEEEecCccHHHHHHHHHHHHHHhH
Q 035870 729 GLLVLQFISIPDERYNEYRLSSDFIKE--YIFPGGCLPSLSRITSAMSVASRLCVEQVENIGIHYYQTLRCWRKNFMEKQ 806 (842)
Q Consensus 729 G~~~~~~~~~~~~~~~~~~~~~~~~~~--~i~p~~~~~~~~~~~~~~~~~~gf~v~~~~~~~~~y~~tl~~w~~~~~~~~ 806 (842)
|++++.++........... ..+.. ..+++..+++..++.+.+++ +||+++.++.++.+|..++..|.+++.+++
T Consensus 160 G~l~i~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~-aGf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (273)
T 3bus_A 160 GTVAIADFVLLAPVEGAKK---EAVDAFRAGGGVLSLGGIDEYESDVRQ-AELVVTSTVDISAQARPSLVKTAEAFENAR 235 (273)
T ss_dssp EEEEEEEEEESSCCCHHHH---HHHHHHHHHHTCCCCCCHHHHHHHHHH-TTCEEEEEEECHHHHTTHHHHHHHHHHHTH
T ss_pred eEEEEEEeeccCCCChhHH---HHHHHHHhhcCccCCCCHHHHHHHHHH-cCCeEEEEEECcHhHHHHHHHHHHHHHHhH
Confidence 9999988765433221111 11111 23567788999999988887 899999999999999999999999999988
Q ss_pred HHHHhccCCHHHHHHHH
Q 035870 807 SKILALGFNDKFIRTWE 823 (842)
Q Consensus 807 ~~~~~~g~~~~~~r~w~ 823 (842)
+++... +++.+.++|.
T Consensus 236 ~~~~~~-~~~~~~~~~~ 251 (273)
T 3bus_A 236 SQVEPF-MGAEGLDRMI 251 (273)
T ss_dssp HHHHHH-HCHHHHHHHH
T ss_pred HHHHhh-cCHHHHHHHH
Confidence 887765 5666555443
No 17
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=99.97 E-value=2.9e-29 Score=287.87 Aligned_cols=285 Identities=18% Similarity=0.187 Sum_probs=153.3
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCeEEEEecCCCCCCCceeEeeCCeeeecceEeecCCCchhHHHHHHHcCCCccc---
Q 035870 1 MRVAVIGAGISGLVSAYVLAKAGVEVVLYEKDDYLGGHAKTVTFDGVDLDLGFMVFNRVTYPNMMEFFESLGVDMEM--- 77 (842)
Q Consensus 1 kdV~IIGaGiaGLsaA~~L~~~G~~V~VlEa~~~~GG~~~s~~~~g~~~d~G~~~~~~~~~~~~~~l~~~lGl~~~~--- 77 (842)
|+|||||||++||+||++|+++|++|+||||++++||+++|++.+|+.+|.|++++. ....+.++++.+|.....
T Consensus 2 k~VvVIGaG~~GL~aA~~La~~G~~V~VlEa~~~~GG~~~t~~~~G~~~D~G~~~~~--~~~~~~~l~~~~g~~~~~~~~ 79 (501)
T 4dgk_A 2 KPTTVIGAGFGGLALAIRLQAAGIPVLLLEQRDKPGGRAYVYEDQGFTFDAGPTVIT--DPSAIEELFALAGKQLKEYVE 79 (501)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEECCC-------CEEEETTEEEECSCCCBS--CTHHHHHHHHTTTCCGGGTCC
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCcEEEEccCCCCCCcEEEEEeCCEEEecCceeec--CchhHHHHHHHhcchhhhcee
Confidence 799999999999999999999999999999999999999999999999999999984 223445788888755332
Q ss_pred ---ccceeeEeccCCCceeeCCCCCCcchhhhhhccCChHHHHHHHHHHhhhHHHHHHHHhhcCC---------------
Q 035870 78 ---SDMSFSVSLEKGHGCEWGSRNGLSSLFAQKKNVLNPYFWQMLREIIKFKDDVLGYLEELESN--------------- 139 (842)
Q Consensus 78 ---~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------- 139 (842)
.+..+.+.+.+|..+.+.. ............ .+.- ...+.++..............
T Consensus 80 ~~~~~~~~~~~~~~g~~~~~~~--~~~~~~~~l~~~-~p~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (501)
T 4dgk_A 80 LLPVTPFYRLCWESGKVFNYDN--DQTRLEAQIQQF-NPRD---VEGYRQFLDYSRAVFKEGYLKLGTVPFLSFRDMLRA 153 (501)
T ss_dssp EEEESSSEEEEETTSCEEEECS--CHHHHHHHHHHH-CTHH---HHHHHHHHHHHHHHTSSSCC--CCCCCCCHHHHHHS
T ss_pred eEecCcceEEEcCCCCEEEeec--cHHHHHHHHhhc-Cccc---cchhhhHHHHHHHhhhhhhhhccccccchhhhhhhh
Confidence 2223344556666555432 111111111111 1111 111111111111111110000
Q ss_pred ----CCCCccccHHHHHHhcCCCHHHHHHHHHHhhhcccCCCchhhccCCHHHHHHHHhhccccccCCCCceEEecCChh
Q 035870 140 ----PDIDRSETLGQFVNSRGYSELFQKAYLIPICGSIWSCPSEGVTSFSAFSVLSFCRNHHLLQLFGRPQWLTVRWRSH 215 (842)
Q Consensus 140 ----~~~~~~~s~~~~l~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG~~ 215 (842)
.......++.+++.+....+.+. .++.. ....++.++...+ +...++.++. ...+.++++||++
T Consensus 154 ~~~~~~l~~~~~~~~~~~~~~~~~~l~-~~l~~-~~~~~g~~p~~~~--~~~~~~~~~~--------~~~G~~~p~GG~~ 221 (501)
T 4dgk_A 154 APQLAKLQAWRSVYSKVASYIEDEHLR-QAFSF-HSLLVGGNPFATS--SIYTLIHALE--------REWGVWFPRGGTG 221 (501)
T ss_dssp GGGTTTSHHHHHHHHHHHTTCCCHHHH-HHHHH-HHHHHHSCC--CC--CTHHHHHHHH--------SCCCEEEETTHHH
T ss_pred hhhhhhhhhcccHHHHHHHHhccHHHH-hhhhh-hhcccCCCcchhh--hhhhhhhhhh--------ccCCeEEeCCCCc
Confidence 00001124455555553333332 22211 1122333333221 2222232222 1234668999999
Q ss_pred HHHHHHHHHhhhcCceEEeCCCeeEEEeCCCcE-EEEeCCCcEEeCCEEEEccChHHHH-HhhcCCC-ChHHHHhccccc
Q 035870 216 SYVNKVRKQLESWGCQIRTSSEVCSVLPADKGC-TIVCGDGSREFYNSCVMALHAPDAL-KILGNQA-TFDETRILGAFQ 292 (842)
Q Consensus 216 ~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v-~V~~~~G~~~~ad~VV~A~p~~~~~-~ll~~~~-~~~~~~~l~~~~ 292 (842)
+++++|++.++++|++|++|++|++|..+++++ .|++++|+++.||+||++++++.+. .|+++.+ +....+.+.+.+
T Consensus 222 ~l~~aL~~~~~~~Gg~I~~~~~V~~I~~~~~~~~gV~~~~g~~~~ad~VV~~a~~~~~~~~Ll~~~~~~~~~~~~~~~~~ 301 (501)
T 4dgk_A 222 ALVQGMIKLFQDLGGEVVLNARVSHMETTGNKIEAVHLEDGRRFLTQAVASNADVVHTYRDLLSQHPAAVKQSNKLQTKR 301 (501)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTSCEEECSCEEECCC--------------------------
T ss_pred chHHHHHHHHHHhCCceeeecceeEEEeeCCeEEEEEecCCcEEEcCEEEECCCHHHHHHHhccccccchhhhhhhhccc
Confidence 999999999999999999999999999999987 5999999999999999999877665 4555432 233345566666
Q ss_pred eeec--eEEEecCCC
Q 035870 293 YVYS--DIFLHRDKR 305 (842)
Q Consensus 293 ~~~~--~v~l~~~~~ 305 (842)
++.. .+++..+..
T Consensus 302 ~~~s~~~~~~~l~~~ 316 (501)
T 4dgk_A 302 MSNSLFVLYFGLNHH 316 (501)
T ss_dssp -CCEEEEEEEEESSC
T ss_pred cCCceeEEEecccCC
Confidence 6553 445555543
No 18
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=99.96 E-value=7.9e-29 Score=280.75 Aligned_cols=389 Identities=14% Similarity=0.153 Sum_probs=253.8
Q ss_pred CcEEEECCChHHHHHHHHHHhCC-CeEEEEecCCCCCCCceeE-eeCCeeeecceEeecCCCchhHHHHHHHcCCCcccc
Q 035870 1 MRVAVIGAGISGLVSAYVLAKAG-VEVVLYEKDDYLGGHAKTV-TFDGVDLDLGFMVFNRVTYPNMMEFFESLGVDMEMS 78 (842)
Q Consensus 1 kdV~IIGaGiaGLsaA~~L~~~G-~~V~VlEa~~~~GG~~~s~-~~~g~~~d~G~~~~~~~~~~~~~~l~~~lGl~~~~~ 78 (842)
+||+|||||++||+||++|+++| .+|+|+|+++++||+++|. ..+|+.+|.|++++.. .++.+.+++++++ +....
T Consensus 10 ~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~~~GG~~~~~~~~~g~~~~~g~~~~~~-~~~~~~~l~~~~~-~~~~~ 87 (484)
T 4dsg_A 10 PKIVIIGAGPTGLGAAVRLTELGYKNWHLYECNDTPGGLSRSFLDENGFTWDLGGHVIFS-HYQYFDDVMDWAV-QGWNV 87 (484)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSSSSSGGGCEEECTTSCEEESSCCCBCC-SBHHHHHHHHHHC-SCEEE
T ss_pred CCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCCCCCCeeeeeecCCCcEEeeCCccccc-ChHHHHHHHHHHh-hhhhh
Confidence 48999999999999999999998 7999999999999999996 6689999999999954 6788889999975 21111
Q ss_pred cceeeEeccCCCceeeCCCCCCcchhhhhhccCChH-HHHHHHHHHhhhHHHHHHHHhhcCCCCCCccccHHHHHHhcCC
Q 035870 79 DMSFSVSLEKGHGCEWGSRNGLSSLFAQKKNVLNPY-FWQMLREIIKFKDDVLGYLEELESNPDIDRSETLGQFVNSRGY 157 (842)
Q Consensus 79 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~ 157 (842)
.......+.+|+.+.++....+. .+... ....+..+++. . . . ....++.++++|+.++ +
T Consensus 88 ~~~~~~~~~~g~~~~~P~~~~~~--------~l~~~~~~~~~~~ll~~--------~-~-~-~~~~~~~s~~e~~~~~-~ 147 (484)
T 4dsg_A 88 LQRESWVWVRGRWVPYPFQNNIH--------RLPEQDRKRCLDELVRS--------H-A-R-TYTEPPNNFEESFTRQ-F 147 (484)
T ss_dssp EECCCEEEETTEEEESSGGGCGG--------GSCHHHHHHHHHHHHHH--------H-H-C-CCSSCCSSHHHHHHHH-H
T ss_pred ccCceEEEECCEEEEeCccchhh--------hCCHHHHHHHHHHHHHH--------H-h-c-cCCCCCCCHHHHHHHH-h
Confidence 11112223455555443111111 11111 11122222211 0 0 1 1123688999999988 7
Q ss_pred CHHHHHHHHHHhhhcccCCCchhhccCC---------HHHHHH-HHhhccccccCCCCceE-EecCChhHHHHHHHHHhh
Q 035870 158 SELFQKAYLIPICGSIWSCPSEGVTSFS---------AFSVLS-FCRNHHLLQLFGRPQWL-TVRWRSHSYVNKVRKQLE 226 (842)
Q Consensus 158 ~~~~~~~~~~p~~~~~~~~~~~~l~~~~---------~~~~~~-~~~~~~~~~~~~~~~~~-~~~gG~~~l~~~L~~~l~ 226 (842)
++.+.+.++.|++.++|+.++++++... ...++. .+....-.+......+. ..+||+++++++|++.+.
T Consensus 148 g~~~~~~~~~p~~~~v~~~~~~~ls~~~~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~f~yp~~gG~~~l~~~la~~l~ 227 (484)
T 4dsg_A 148 GEGIADIFMRPYNFKVWAVPPCLMSTEWVEERVAPVDLERIRRNIQENRDDLGWGPNATFRFPQRGGTGIIYQAIKEKLP 227 (484)
T ss_dssp HHHHCCCCCHHHHHHHHSSCGGGBCSSSCTTTSCCCCHHHHHHHHHHTCCCCCCSTTSEEEEESSSCTHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHhhhcCCCHHHhcHHHHhccccCCCHHHHHHHHhhcccccCCCccceEEeecCCCHHHHHHHHHhhhh
Confidence 8888889999999999999999985422 112211 11111100000112233 456999999999999995
Q ss_pred hcCceEEeC--CCeeEEEeCCCcEEEEeCCCcEEeCCEEEEccChHHHHHhhcC---CCChHHHHhccccceee-ceEEE
Q 035870 227 SWGCQIRTS--SEVCSVLPADKGCTIVCGDGSREFYNSCVMALHAPDALKILGN---QATFDETRILGAFQYVY-SDIFL 300 (842)
Q Consensus 227 ~~G~~i~~~--~~V~~I~~~~~~v~V~~~~G~~~~ad~VV~A~p~~~~~~ll~~---~~~~~~~~~l~~~~~~~-~~v~l 300 (842)
+ .+|+++ ++|++|..++++| ++.+|+++.||+||+|+|++.+.+++.+ .+++...+.+.+++|.+ .++.+
T Consensus 228 ~--~~i~~~~~~~V~~I~~~~~~v--~~~~G~~~~ad~VI~a~p~~~~~~ll~~~~~~~~~~~~~~l~~l~y~s~~~v~l 303 (484)
T 4dsg_A 228 S--EKLTFNSGFQAIAIDADAKTI--TFSNGEVVSYDYLISTVPFDNLLRMTKGTGFKGYDEWPAIADKMVYSSTNVIGI 303 (484)
T ss_dssp G--GGEEECGGGCEEEEETTTTEE--EETTSCEEECSEEEECSCHHHHHHHEECSSCTTGGGHHHHHHHCCEEEEEEEEE
T ss_pred h--CeEEECCCceeEEEEecCCEE--EECCCCEEECCEEEECCCHHHHHHHhhccCCCCCHHHHHHHhCCCcCceEEEEE
Confidence 4 289999 5699999988865 4578888999999999999999999864 25566778889999998 46667
Q ss_pred ecCCCC-----------cCCCCC------CcceeeecccCCCceEEEEEccc--ccCCCCC-----CCCeEEecCCCCCC
Q 035870 301 HRDKRF-----------MPQNPA------AWSAWNFLESFDSKVCLTYWLNV--LQNLGET-----SLPFLVTLNPDHVP 356 (842)
Q Consensus 301 ~~~~~~-----------~p~~~~------~~~~~~~~~~~~~~~~v~~~~~~--l~~l~~~-----~~~~~~~l~~~~~~ 356 (842)
.++.+. +|+... .+++|.....|+++..+...... ...+.+. ..+.+..+....+.
T Consensus 304 ~~~~~~~~~~~~~~~i~vp~~~~~~~ri~~~s~~~p~~ap~g~~~l~~e~~~~~~~~~~d~~l~~~a~~~L~~~~~~~~~ 383 (484)
T 4dsg_A 304 GVKGTPPPHLKTACWLYFPEDTSPFYRATVFSNYSKYNVPEGHWSLMLEVSESKYKPVNHSTLIEDCIVGCLASNLLLPE 383 (484)
T ss_dssp EEESCCCGGGTTCCEEECCSTTCSCSEEECGGGTCGGGSCTTEEEEEEEEEEBTTBCCCTTSHHHHHHHHHHHTTSCCTT
T ss_pred EEcCCCcccCCCCeEEEEEcCCCeEEEEEeecCCCcccCCCCeEEEEEEEecCcCCcCCHHHHHHHHHHHHHHcCCCCcc
Confidence 776542 132221 11222212234555555433221 1111111 11112223222111
Q ss_pred cc----eeEEEEcCCCCCCHHHHHHHHhhhh-hcCCCCeEEeccccC-----CCCCchhHhHHHHHHHHhc
Q 035870 357 EH----TLLKWSTGHPVPSVAASKASLELDH-IQGKRGIWFCGAYQG-----YGFHEDGLKAGMTAAHGVL 417 (842)
Q Consensus 357 ~~----~~~~w~~~~p~~~~~~~~~~~~~~~-~~~~~~l~~aG~~~g-----~G~~e~A~~SG~~aA~~Il 417 (842)
+. .+.+|..++|+|++++......+.+ .... ||+++|.+.. .+. +.|+.||.++|+.|+
T Consensus 384 ~~~~~~~v~r~~~~yP~y~~~~~~~~~~~~~~l~~~-~l~~~Gr~g~~~y~v~~~-d~~i~sg~~aa~~i~ 452 (484)
T 4dsg_A 384 DLLVSKWHYRIEKGYPTPFIGRNNLLEKAQPELMSR-CIYSRGRFGAWRYEVGNQ-DHSFMQGVEAIDHVL 452 (484)
T ss_dssp CCEEEEEEEEEEEEEECCBTTHHHHHHHHHHHHHHT-TEEECSTTTTCCGGGCSH-HHHHHHHHHHHHHHT
T ss_pred ceEEEEEEEEeCccccCCCccHHHHHHHHHHHHHhC-CcEeecCCcccccCCCCh-HHHHHHHHHHHHHHH
Confidence 22 4569999999999999988877776 3334 9999999543 344 999999999999999
No 19
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=99.96 E-value=6.6e-29 Score=279.22 Aligned_cols=393 Identities=16% Similarity=0.162 Sum_probs=243.9
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCeEEEEecCCCCCCCceeEeeC---CeeeecceEeecCCCchhHHHHHHHcCCCccc
Q 035870 1 MRVAVIGAGISGLVSAYVLAKAGVEVVLYEKDDYLGGHAKTVTFD---GVDLDLGFMVFNRVTYPNMMEFFESLGVDMEM 77 (842)
Q Consensus 1 kdV~IIGaGiaGLsaA~~L~~~G~~V~VlEa~~~~GG~~~s~~~~---g~~~d~G~~~~~~~~~~~~~~l~~~lGl~~~~ 77 (842)
+||+|||||++||+||++|+++|++|+|||+++++||++.+.+.+ |..++.|+++++...++++.++++++|++...
T Consensus 2 ~dVvVIGaG~aGl~aA~~L~~~G~~V~vlE~~~~~GG~~~t~~~~cipg~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~ 81 (431)
T 3k7m_X 2 YDAIVVGGGFSGLKAARDLTNAGKKVLLLEGGERLGGRAYSRESRNVPGLRVEIGGAYLHRKHHPRLAAELDRYGIPTAA 81 (431)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTCCEEECSSSTTCEEESSCCCBCTTTCHHHHHHHHHHTCCEEE
T ss_pred CCEEEECCcHHHHHHHHHHHHcCCeEEEEecCCCccCeecceeccCCCCceEecCCeeeCCCCcHHHHHHHHHhCCeeee
Confidence 389999999999999999999999999999999999999998887 99999999999654378888999999998665
Q ss_pred ccceeeEec--cCCCceeeCCCCCCcchhhhhhccCChHHHHHH-HHHHhhhHHHHHHHHh-hc--CCCCCCccccHHHH
Q 035870 78 SDMSFSVSL--EKGHGCEWGSRNGLSSLFAQKKNVLNPYFWQML-REIIKFKDDVLGYLEE-LE--SNPDIDRSETLGQF 151 (842)
Q Consensus 78 ~~~~~~~~~--~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~--~~~~~~~~~s~~~~ 151 (842)
........+ .++.. .. .++ ........+ ..+.++.......... .. ......+ .++.+|
T Consensus 82 ~~~~~~~~~~~~~~~~-~~--------~~~-----~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~d-~s~~~~ 146 (431)
T 3k7m_X 82 ASEFTSFRHRLGPTAV-DQ--------AFP-----IPGSEAVAVEAATYTLLRDAHRIDLEKGLENQDLEDLD-IPLNEY 146 (431)
T ss_dssp CCCCCEECCBSCTTCC-SS--------SSC-----CCGGGHHHHHHHHHHHHHHHTTCCTTTCTTSSSCGGGC-SBHHHH
T ss_pred cCCCCcEEEEecCCee-cC--------CCC-----CCHHHHHHHHHHHHHHHHHHHhcCCCCCccCcchhhhc-CCHHHH
Confidence 433322222 11111 00 000 000101111 1111111111000000 00 0001113 889999
Q ss_pred HHhcCCCHHHHHHHHHHhhhcccCCCchhhccCCHHHHHHHHhhcc--ccccCCCCceEEecCChhHHHHHHHHHhhhcC
Q 035870 152 VNSRGYSELFQKAYLIPICGSIWSCPSEGVTSFSAFSVLSFCRNHH--LLQLFGRPQWLTVRWRSHSYVNKVRKQLESWG 229 (842)
Q Consensus 152 l~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~gG~~~l~~~L~~~l~~~G 229 (842)
+...+..+.. ..++.++....++.++.++ ++..++.++...+ .......... .+.+|+..+++.+++.+ |
T Consensus 147 l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~---s~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~l~~~~~~~~---g 218 (431)
T 3k7m_X 147 VDKLDLPPVS-RQFLLAWAWNMLGQPADQA---SALWMLQLVAAHHYSILGVVLSLDE-VFSNGSADLVDAMSQEI---P 218 (431)
T ss_dssp HHHHTCCHHH-HHHHHHHHHHHHSSCTTTS---BHHHHHHHHHHTTSCHHHHHHTCCE-EETTCTHHHHHHHHTTC---S
T ss_pred HHhcCCCHHH-HHHHHHHHHHhcCCChhhh---hHHHHHHHHHhcCCccceeecchhh-hcCCcHHHHHHHHHhhC---C
Confidence 9988776654 3456677777888877765 6666655554321 0000111223 78999999999988765 7
Q ss_pred ceEEeCCCeeEEEeCCCcEEEEeCCCcEEeCCEEEEccChHHHHHh-hcCCCChHHHHhccccceee-ceEEEecCCCCc
Q 035870 230 CQIRTSSEVCSVLPADKGCTIVCGDGSREFYNSCVMALHAPDALKI-LGNQATFDETRILGAFQYVY-SDIFLHRDKRFM 307 (842)
Q Consensus 230 ~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VV~A~p~~~~~~l-l~~~~~~~~~~~l~~~~~~~-~~v~l~~~~~~~ 307 (842)
+|++|++|++|+.++++|.|++.+|+++.||+||+|+|+..+.++ +.|+++....+++..+.+.. .++.+.+++++.
T Consensus 219 -~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~vi~a~~~~~l~~i~~~p~l~~~~~~~~~~~~~~~~~kv~~~~~~~~~ 297 (431)
T 3k7m_X 219 -EIRLQTVVTGIDQSGDVVNVTVKDGHAFQAHSVIVATPMNTWRRIVFTPALPERRRSVIEEGHGGQGLKILIHVRGAEA 297 (431)
T ss_dssp -CEESSCCEEEEECSSSSEEEEETTSCCEEEEEEEECSCGGGGGGSEEESCCCHHHHHHHHHCCCCCEEEEEEEEESCCT
T ss_pred -ceEeCCEEEEEEEcCCeEEEEECCCCEEEeCEEEEecCcchHhheeeCCCCCHHHHHHHHhCCCcceEEEEEEECCCCc
Confidence 999999999999999999999999988999999999999998887 35556777778888877777 688888887652
Q ss_pred CC--CCCCcce--eeecccCCCceEEEEEcccccCCCCC----CCCeEEecCCCCCCcc-eeEEEEc------CCCCCCH
Q 035870 308 PQ--NPAAWSA--WNFLESFDSKVCLTYWLNVLQNLGET----SLPFLVTLNPDHVPEH-TLLKWST------GHPVPSV 372 (842)
Q Consensus 308 p~--~~~~~~~--~~~~~~~~~~~~v~~~~~~l~~l~~~----~~~~~~~l~~~~~~~~-~~~~w~~------~~p~~~~ 372 (842)
.- ....+.. +.+.....+...+..+..... +... +.+.+..+.|...+.. ...+|.. +++.+.+
T Consensus 298 ~i~~~~d~~~~~~~~~~~~~~~~~~l~~~~~g~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~W~~d~~~~G~~~~~~~ 376 (431)
T 3k7m_X 298 GIECVGDGIFPTLYDYCEVSESERLLVAFTDSGS-FDPTDIGAVKDAVLYYLPEVEVLGIDYHDWIADPLFEGPWVAPRV 376 (431)
T ss_dssp TEEEEBSSSSSEEEEEEECSSSEEEEEEEEETTT-CCTTCHHHHHHHHHHHCTTCEEEEEECCCTTTCTTTSSSSCCCCT
T ss_pred CceEcCCCCEEEEEeCcCCCCCCeEEEEEecccc-CCCCCHHHHHHHHHHhcCCCCccEeEecccCCCCCCCCCCCCcCC
Confidence 10 0011111 222222133334433332211 1111 1223334444332222 3346743 2333333
Q ss_pred HHHHHHHhhhhhcCCCCeEEecccc---CCCCCchhHhHHHHHHHHhcCC
Q 035870 373 AASKASLELDHIQGKRGIWFCGAYQ---GYGFHEDGLKAGMTAAHGVLGK 419 (842)
Q Consensus 373 ~~~~~~~~~~~~~~~~~l~~aG~~~---g~G~~e~A~~SG~~aA~~Il~~ 419 (842)
+.... ....-.+|.++|||||+.+ ..|+++||+.||+++|++||-.
T Consensus 377 g~~~~-~~~~l~~p~g~~~fAGe~t~~~~~g~~~GA~~sg~raa~~i~~~ 425 (431)
T 3k7m_X 377 GQFSR-VHKELGEPAGRIHFVGSDVSLEFPGYIEGALETAECAVNAILHS 425 (431)
T ss_dssp TTTTT-SSGGGGSCBTTEEECSGGGCSSSTTSHHHHHHHHHHHHHHHHHC
T ss_pred CCCcc-cHHHHhCCCCcEEEEehhhhccCCeEehHHHHHHHHHHHHHHhh
Confidence 32111 0111145678999999854 5677799999999999999854
No 20
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.96 E-value=2.2e-27 Score=252.51 Aligned_cols=259 Identities=18% Similarity=0.204 Sum_probs=212.3
Q ss_pred CchHHhhhhhhhhhcCC--hHHHHh-ccCCCCcccccccCCC--cccHHHHHHHHHHHHHHHc----CCCCCCeEEEecc
Q 035870 568 NTLTQARRNISRHYDLS--NELFSL-FLDESMTYSCAVFKSE--DEDLKAAQMRKVSLLIEKA----RVSKGQEVLEIGC 638 (842)
Q Consensus 568 ~~~~~~~~~i~~~Yd~~--~~~~~~-~l~~~~~ys~~~~~~~--~~~l~~aq~~~~~~l~~~l----~~~~~~~vLDiGc 638 (842)
++...+.+++..|||.. ++||+. |.+++++| ++|... ...+.+++.+..+.+++.+ .+.++.+||||||
T Consensus 14 ~~~~~~~~~~~~~Yd~~~~~~~y~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vLDiGc 91 (297)
T 2o57_A 14 ATSKTVKDNAEIYYDDDDSDRFYFHVWGGEDIHV--GLYKEPVDQDEIREASLRTDEWLASELAMTGVLQRQAKGLDLGA 91 (297)
T ss_dssp --CHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCS--CCCCSSGGGSCHHHHHHHHHHHHHHHHHHTTCCCTTCEEEEETC
T ss_pred hhHHHHHHHHHHHcCCccchhHHHHHhCCCceEE--EecCCCCCCcchHHHHHHHHHHHHHHhhhccCCCCCCEEEEeCC
Confidence 34566778999999987 499975 44677654 899887 8899999999999999999 8899999999999
Q ss_pred CchHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCc-cCCCccEEEEcchhhhcChhhHHHH
Q 035870 639 GWGTLAIEIVKRTGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLA-KANKYDRIISCEMIEAVGHEFMEEF 717 (842)
Q Consensus 639 G~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~-~~~~fD~i~s~~~~~~~~~~~~~~~ 717 (842)
|+|.++..+++..+++|+|+|+|+.+++.|++++...++.++++++++|+.+++ ++++||+|++..+++|+++ +..+
T Consensus 92 G~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~--~~~~ 169 (297)
T 2o57_A 92 GYGGAARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIPCEDNSYDFIWSQDAFLHSPD--KLKV 169 (297)
T ss_dssp TTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCSSCTTCEEEEEEESCGGGCSC--HHHH
T ss_pred CCCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccCCCCCCCEeEEEecchhhhcCC--HHHH
Confidence 999999999988788999999999999999999999998889999999999988 6789999999999999987 8999
Q ss_pred HHHHHhccccCcEEEEEeecCCCcccccccCccchhhhcccCCCCCCCHHHHHHHHhhcCCcEEEEEEecC----ccHHH
Q 035870 718 FGCCESLLAEDGLLVLQFISIPDERYNEYRLSSDFIKEYIFPGGCLPSLSRITSAMSVASRLCVEQVENIG----IHYYQ 793 (842)
Q Consensus 718 ~~~~~~~LkpgG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~gf~v~~~~~~~----~~y~~ 793 (842)
+++++++|||||++++.++......... ....+...+.+| .+++..++.+.+.+ +||+++.++++. .+|..
T Consensus 170 l~~~~~~LkpgG~l~~~~~~~~~~~~~~--~~~~~~~~~~~~--~~~~~~~~~~~l~~-aGf~~~~~~~~~~~~~~~~~~ 244 (297)
T 2o57_A 170 FQECARVLKPRGVMAITDPMKEDGIDKS--SIQPILDRIKLH--DMGSLGLYRSLAKE-CGLVTLRTFSRPDSLVHHYSK 244 (297)
T ss_dssp HHHHHHHEEEEEEEEEEEEEECTTCCGG--GGHHHHHHHTCS--SCCCHHHHHHHHHH-TTEEEEEEEECHHHHHHHHHH
T ss_pred HHHHHHHcCCCeEEEEEEeccCCCCchH--HHHHHHHHhcCC--CCCCHHHHHHHHHH-CCCeEEEEEECchhhHHHHHH
Confidence 9999999999999999987655432211 122334444443 36688899888887 899999998865 45666
Q ss_pred HHHHHHHHHHHhHHHHHhccCCHHHHHHHHHHHHHHHHhcccCcccc
Q 035870 794 TLRCWRKNFMEKQSKILALGFNDKFIRTWEYYFDYCAAGFKSYTLGN 840 (842)
Q Consensus 794 tl~~w~~~~~~~~~~~~~~g~~~~~~r~w~~y~~~~~~~f~~~~~~~ 840 (842)
++..|.++ .+++.. .+++.+.++|..++..|..+++.|.+..
T Consensus 245 ~~~~~~~~----~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 286 (297)
T 2o57_A 245 VKAELIKR----SSEIAS-FCSPEFQANMKRGLEHWIEGGRAGKLTW 286 (297)
T ss_dssp HHHHHHHT----HHHHTT-TSCHHHHHHHHHHHHHHHHHHHTTSEEE
T ss_pred HHHHHHHh----HHHHhc-cCCHHHHHHHHHHHHHHHHhccCCeEEE
Confidence 66666554 344444 4789999999999999999998887654
No 21
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=99.96 E-value=1.4e-28 Score=282.33 Aligned_cols=276 Identities=16% Similarity=0.113 Sum_probs=179.0
Q ss_pred CcEEEECCChHHHHHHHHHHhCC-CeEEEEecCCCCCCCceeEee-CCeeeecceEeecCCCchhHHHHHHHcCCCcccc
Q 035870 1 MRVAVIGAGISGLVSAYVLAKAG-VEVVLYEKDDYLGGHAKTVTF-DGVDLDLGFMVFNRVTYPNMMEFFESLGVDMEMS 78 (842)
Q Consensus 1 kdV~IIGaGiaGLsaA~~L~~~G-~~V~VlEa~~~~GG~~~s~~~-~g~~~d~G~~~~~~~~~~~~~~l~~~lGl~~~~~ 78 (842)
+||+|||||+|||+||++|+++| ++|+|||+++++|||++|... +|+.+|.|+++++......+.+++.++|+.....
T Consensus 9 ~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~riGGr~~t~~~~~G~~~D~G~~~~~~~~~~~~~~~~~~lg~~~~~~ 88 (516)
T 1rsg_A 9 KKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDRVGGRLQTVTGYQGRKYDIGASWHHDTLTNPLFLEEAQLSLNDGRT 88 (516)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSSSSBTTCCEEECGGGCEEESSCCEECCTTTCHHHHHHHHHHHHHCCC
T ss_pred CcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCCCCCceeeeecCCCcEEecCCeEEecCCCChHHHHHHHhCCCCcce
Confidence 48999999999999999999999 999999999999999999987 8999999999997543445667777777632211
Q ss_pred cceeeEeccCCCceeeCCCCCCcchhhhhhccCChHHHHHHHHHHhhhHHHHHHHHhhcCCCCCCccccHHHHHHhc---
Q 035870 79 DMSFSVSLEKGHGCEWGSRNGLSSLFAQKKNVLNPYFWQMLREIIKFKDDVLGYLEELESNPDIDRSETLGQFVNSR--- 155 (842)
Q Consensus 79 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~--- 155 (842)
...+.++..+.+..... .+.. .....+......+.++... ........++.|+.+|+.+.
T Consensus 89 ----~~~~~~~~~~~~~~~~~--~~~~----~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~d~s~~~~l~~~l~~ 151 (516)
T 1rsg_A 89 ----RFVFDDDNFIYIDEERG--RVDH----DKELLLEIVDNEMSKFAEL-------EFHQHLGVSDCSFFQLVMKYLLQ 151 (516)
T ss_dssp ----CEECCCCCCEEEETTTE--ECTT----CTTTCHHHHHHHHHHHHHH-------HC-------CCBHHHHHHHHHHH
T ss_pred ----eEEECCCCEEEEcCCCc--cccc----cHHHHHHHHHHHHHHHHHH-------HhhhccCCCCCCHHHHHHHHHHH
Confidence 12233444333322110 0000 0111122222222222111 11100112567888887642
Q ss_pred ---CCCHHHHHHHHHHhh---hcccCCCchhhccCCHHHHHHHHhhccccccCCCCceEEecCChhHHHHHHHHHhhhcC
Q 035870 156 ---GYSELFQKAYLIPIC---GSIWSCPSEGVTSFSAFSVLSFCRNHHLLQLFGRPQWLTVRWRSHSYVNKVRKQLESWG 229 (842)
Q Consensus 156 ---~~~~~~~~~~~~p~~---~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG~~~l~~~L~~~l~~~G 229 (842)
.+.+.. ..++.+++ ...++.+++.+ ++..++ .. ..+...+++| ++.++++|++.++ +
T Consensus 152 ~~~~l~~~~-~~~~~~~~~~~~~~~g~~~~~~---s~~~~~---~~-------~~~~~~~~~g-~~~l~~~l~~~l~--~ 214 (516)
T 1rsg_A 152 RRQFLTNDQ-IRYLPQLCRYLELWHGLDWKLL---SAKDTY---FG-------HQGRNAFALN-YDSVVQRIAQSFP--Q 214 (516)
T ss_dssp HGGGSCHHH-HHHHHHHHGGGHHHHTBCTTTS---BHHHHC---CC-------CSSCCEEESC-HHHHHHHHHTTSC--G
T ss_pred hhcccCHHH-HHHHHHHHHHHHHHhCCChHHC---ChHHHH---hh-------ccCcchhhhC-HHHHHHHHHHhCC--C
Confidence 122211 11222222 12234444333 333221 10 1122345677 9999999999886 3
Q ss_pred ceEEeCCCeeEEEeC-CCcEEEEeCCCcEEeCCEEEEccChHHHHHh------------hcCCCChHHHHhccccceee-
Q 035870 230 CQIRTSSEVCSVLPA-DKGCTIVCGDGSREFYNSCVMALHAPDALKI------------LGNQATFDETRILGAFQYVY- 295 (842)
Q Consensus 230 ~~i~~~~~V~~I~~~-~~~v~V~~~~G~~~~ad~VV~A~p~~~~~~l------------l~~~~~~~~~~~l~~~~~~~- 295 (842)
++|++|++|++|..+ +++|.|++.+|+++.||+||+|+|+..+... +.|++++...+++++++|.+
T Consensus 215 ~~i~~~~~V~~I~~~~~~~v~v~~~~g~~~~ad~VI~t~p~~~l~~~~~~~~~~~~~i~f~P~Lp~~~~~ai~~~~~~~~ 294 (516)
T 1rsg_A 215 NWLKLSCEVKSITREPSKNVTVNCEDGTVYNADYVIITVPQSVLNLSVQPEKNLRGRIEFQPPLKPVIQDAFDKIHFGAL 294 (516)
T ss_dssp GGEETTCCEEEEEECTTSCEEEEETTSCEEEEEEEEECCCHHHHHGGGSSCSCSTTCCEEESCCCHHHHHHTTSSCCCCC
T ss_pred CEEEECCEEEEEEEcCCCeEEEEECCCcEEECCEEEECCCHHHhhhccccccccccceEecCCCCHHHHHHHHhCCCCcc
Confidence 689999999999986 6679999999988999999999999998642 23447788899999999999
Q ss_pred ceEEEecCCCCcCCC
Q 035870 296 SDIFLHRDKRFMPQN 310 (842)
Q Consensus 296 ~~v~l~~~~~~~p~~ 310 (842)
.++++.|+.++|+..
T Consensus 295 ~Kv~l~f~~~fW~~~ 309 (516)
T 1rsg_A 295 GKVIFEFEECCWSNE 309 (516)
T ss_dssp EEEEEEESSCCSCCS
T ss_pred eEEEEEeCCCCCCCC
Confidence 699999999999764
No 22
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=99.95 E-value=2.4e-28 Score=279.18 Aligned_cols=287 Identities=15% Similarity=0.148 Sum_probs=177.3
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCeEEEEecCCCCCCCceeEee-----------------CCeeeecceEeecCCCchh
Q 035870 1 MRVAVIGAGISGLVSAYVLAKAGVEVVLYEKDDYLGGHAKTVTF-----------------DGVDLDLGFMVFNRVTYPN 63 (842)
Q Consensus 1 kdV~IIGaGiaGLsaA~~L~~~G~~V~VlEa~~~~GG~~~s~~~-----------------~g~~~d~G~~~~~~~~~~~ 63 (842)
+||+|||||++||+||++|+++|++|+|||+++++||+++|.+. +|..+|.|++++.. .+ .
T Consensus 12 ~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~-~ 89 (489)
T 2jae_A 12 HSVVVLGGGPAGLCSAFELQKAGYKVTVLEARTRPGGRVWTARGGSEETDLSGETQKCTFSEGHFYNVGATRIPQ-SH-I 89 (489)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTCCEEETTCEEECTTSCEEECCCCTTCEEESSCCCEET-TS-T
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEeccCCCCCceeeeccCcccccccchhhhhcccCCCcCCcchhhccc-HH-H
Confidence 58999999999999999999999999999999999999998875 57889999998854 44 8
Q ss_pred HHHHHHHcCCCcccccce--eeEec-cCCCceeeCCCCCCcchhhhhhccCChHHHHHHHHHHhhhHHHHHHHHhhcCCC
Q 035870 64 MMEFFESLGVDMEMSDMS--FSVSL-EKGHGCEWGSRNGLSSLFAQKKNVLNPYFWQMLREIIKFKDDVLGYLEELESNP 140 (842)
Q Consensus 64 ~~~l~~~lGl~~~~~~~~--~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (842)
+.++++++|+........ ....+ .++. .|.+ ... ...... ..++..+.++.+..... .......
T Consensus 90 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--~~~g-~~~-~~~~~~-----~~~~~~~~~l~~~~~~~----~~~~~~~ 156 (489)
T 2jae_A 90 TLDYCRELGVEIQGFGNQNANTFVNYQSDT--SLSG-QSV-TYRAAK-----ADTFGYMSELLKKATDQ----GALDQVL 156 (489)
T ss_dssp HHHHHHHHTCCEEEECCCCTTSEEECCCSS--TTTT-CCE-EHHHHH-----HHHHHHHHHHHHHHHHH----TTTTTTS
T ss_pred HHHHHHHcCCceEEccccCCCceEEecCCc--ccCC-ccc-cHHHHh-----hhhhccHHHHHHHHHhc----ccccccc
Confidence 889999999986543211 01111 1100 0101 000 010000 01111112221111000 0000000
Q ss_pred CCCccccHHHHHHhcCCCHHHHHHHHHHhhhcccCCC------------chhhccCCHHHHHHHHhhccccccCCCCceE
Q 035870 141 DIDRSETLGQFVNSRGYSELFQKAYLIPICGSIWSCP------------SEGVTSFSAFSVLSFCRNHHLLQLFGRPQWL 208 (842)
Q Consensus 141 ~~~~~~s~~~~l~~~~~~~~~~~~~~~p~~~~~~~~~------------~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (842)
...++.++.+|+.+. ++...+..+.+.....|..+ +.++..++...+..++... ........++
T Consensus 157 ~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 232 (489)
T 2jae_A 157 SREDKDALSEFLSDF--GDLSDDGRYLGSSRRGYDSEPGAGLNFGTEKKPFAMQEVIRSGIGRNFSFD--FGYDQAMMMF 232 (489)
T ss_dssp CHHHHHHHHHHHHHH--TTCCTTSCCCCCGGGCEEECCCBTTCCCEECCCCCHHHHHHHTTTTTGGGG--GCTTTSSSEE
T ss_pred chhhHHHHHHHHHHh--hhhhhccccccccchhhccCCCcccccCCCCCCcCHHHHhhhhHHHHHhhh--hccccCccEE
Confidence 001344777777751 11000000011111111111 1111111111111122211 1122346789
Q ss_pred EecCChhHHHHHHHHHhhhcCceEEeCCCeeEEEeCCCcEEEEeCCC---cEEeCCEEEEccChHHHHHhhcCCCChHHH
Q 035870 209 TVRWRSHSYVNKVRKQLESWGCQIRTSSEVCSVLPADKGCTIVCGDG---SREFYNSCVMALHAPDALKILGNQATFDET 285 (842)
Q Consensus 209 ~~~gG~~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G---~~~~ad~VV~A~p~~~~~~ll~~~~~~~~~ 285 (842)
+++||++.|+++|++.+.+ ++|++|++|++|..++++|.|++.+| +++.||+||+|+|+..+.++.. .+++.+.
T Consensus 233 ~~~gG~~~l~~~l~~~l~~--~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~~~~ad~vI~a~p~~~l~~l~~-~l~~~~~ 309 (489)
T 2jae_A 233 TPVGGMDRIYYAFQDRIGT--DNIVFGAEVTSMKNVSEGVTVEYTAGGSKKSITADYAICTIPPHLVGRLQN-NLPGDVL 309 (489)
T ss_dssp EETTCTTHHHHHHHHHHCG--GGEETTCEEEEEEEETTEEEEEEEETTEEEEEEESEEEECSCHHHHTTSEE-CCCHHHH
T ss_pred eecCCHHHHHHHHHHhcCC--CeEEECCEEEEEEEcCCeEEEEEecCCeEEEEECCEEEECCCHHHHHhCcc-CCCHHHH
Confidence 9999999999999999942 78999999999999999999998876 5799999999999998888776 4777888
Q ss_pred Hhccccceee-ceEEEecCCCCcCC
Q 035870 286 RILGAFQYVY-SDIFLHRDKRFMPQ 309 (842)
Q Consensus 286 ~~l~~~~~~~-~~v~l~~~~~~~p~ 309 (842)
+++++++|.+ .++++.++.++|+.
T Consensus 310 ~~l~~~~~~~~~kv~l~~~~~~w~~ 334 (489)
T 2jae_A 310 TALKAAKPSSSGKLGIEYSRRWWET 334 (489)
T ss_dssp HHHHTEECCCEEEEEEEESSCHHHH
T ss_pred HHHHhCCCccceEEEEEeCCCCccC
Confidence 8999999988 68889999887754
No 23
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=99.95 E-value=1.5e-26 Score=262.61 Aligned_cols=390 Identities=16% Similarity=0.195 Sum_probs=229.3
Q ss_pred CcEEEECCChHHHHHHHHHHhCCC-eEEEEecCCCCCCCceeEeeCCeeeecceEeecC---CCchhHHHHHHH-cCCCc
Q 035870 1 MRVAVIGAGISGLVSAYVLAKAGV-EVVLYEKDDYLGGHAKTVTFDGVDLDLGFMVFNR---VTYPNMMEFFES-LGVDM 75 (842)
Q Consensus 1 kdV~IIGaGiaGLsaA~~L~~~G~-~V~VlEa~~~~GG~~~s~~~~g~~~d~G~~~~~~---~~~~~~~~l~~~-lGl~~ 75 (842)
+||+|||||++||+||+.|++.|+ +|+|+|+++++||++++....|+.+|.|+++++. .....+.+++++ +|+..
T Consensus 5 ~~~~iiG~G~~g~~~a~~l~~~g~~~v~~~e~~~~~gg~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~lgl~~ 84 (472)
T 1b37_A 5 PRVIVVGAGMSGISAAKRLSEAGITDLLILEATDHIGGRMHKTNFAGINVELGANWVEGVNGGKMNPIWPIVNSTLKLRN 84 (472)
T ss_dssp CCEEEECCBHHHHHHHHHHHHTTCCCEEEECSSSSSBTTSCEEEETTEEEESSCCEEEEESSSSCCTHHHHHHTTSCCCE
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCceEEEeCCCCCCCceeecccCCcEEeeCCeEEeccCCCCCCHHHHHHHhhcCCce
Confidence 489999999999999999999999 8999999999999999999999999999999962 234568899999 89876
Q ss_pred ccccce---eeEeccCCCceeeCCCCCCcchhhhhhccCChHHHHHHHHHHhhhHHHHHHHHhhcCCCCCCccccHHH--
Q 035870 76 EMSDMS---FSVSLEKGHGCEWGSRNGLSSLFAQKKNVLNPYFWQMLREIIKFKDDVLGYLEELESNPDIDRSETLGQ-- 150 (842)
Q Consensus 76 ~~~~~~---~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~-- 150 (842)
...... ..+...+|+.+.. ... .........+..+.... ..... ....++.++.+
T Consensus 85 ~~~~~~~~~~~~~~~~g~~~~~----------~~~-----~~~~~~~~~~~~~~~~~---~~~~~--~~~~~~~s~~~~~ 144 (472)
T 1b37_A 85 FRSDFDYLAQNVYKEDGGVYDE----------DYV-----QKRIELADSVEEMGEKL---SATLH--ASGRDDMSILAMQ 144 (472)
T ss_dssp EECCCTTGGGCEECSSSSBCCH----------HHH-----HHHHHHHHHHHHHHHHH---HHTSC--TTCTTCCBHHHHH
T ss_pred eeccCccccceeEcCCCCCCCH----------HHH-----HHHHHHHHHHHHHHHHH---HHhhc--cccchhhhHHHHH
Confidence 432211 0111112221110 000 01111111111111111 11111 11124556543
Q ss_pred HHHhcCC--CHHHHHHHHHHhhh-cccCCCchhhccCCHHHHHHHHhhccccccCCCCceE-EecCChhHHHHHHHHHhh
Q 035870 151 FVNSRGY--SELFQKAYLIPICG-SIWSCPSEGVTSFSAFSVLSFCRNHHLLQLFGRPQWL-TVRWRSHSYVNKVRKQLE 226 (842)
Q Consensus 151 ~l~~~~~--~~~~~~~~~~p~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~gG~~~l~~~L~~~l~ 226 (842)
++.+... .....+.++.+++. ..++.+++.++.........+.. .....++ .++||++.++++|++.+.
T Consensus 145 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~-------~~~~~~~~~~~gG~~~l~~~l~~~l~ 217 (472)
T 1b37_A 145 RLNEHQPNGPATPVDMVVDYYKFDYEFAEPPRVTSLQNTVPLATFSD-------FGDDVYFVADQRGYEAVVYYLAGQYL 217 (472)
T ss_dssp HHHHTSSSSCCSHHHHHHHHHHTHHHHSSCGGGBBSTTTSSCHHHHH-------HCSEEEEECCTTCTTHHHHHHHHTTS
T ss_pred HHhhhcccccccHHHHHHHHHHHhhhhcccccccchhhccccccccc-------cCCceeeeecCCcHHHHHHHHHHhcc
Confidence 5544321 11112334444432 22344444432111100000100 0112222 247999999999999987
Q ss_pred hc--------CceEEeCCCeeEEEeCCCcEEEEeCCCcEEeCCEEEEccChHHHHHhh---cCCCChHHHHhccccceee
Q 035870 227 SW--------GCQIRTSSEVCSVLPADKGCTIVCGDGSREFYNSCVMALHAPDALKIL---GNQATFDETRILGAFQYVY 295 (842)
Q Consensus 227 ~~--------G~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VV~A~p~~~~~~ll---~~~~~~~~~~~l~~~~~~~ 295 (842)
+. |++|+++++|++|..++++|.|++.+|+++.||+||+|+|+..+.+++ .+.+++...+++.++.+..
T Consensus 218 ~~~~~~~~i~~~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~vI~a~~~~~l~~~~~~~~p~Lp~~~~~ai~~~~~~~ 297 (472)
T 1b37_A 218 KTDDKSGKIVDPRLQLNKVVREIKYSPGGVTVKTEDNSVYSADYVMVSASLGVLQSDLIQFKPKLPTWKVRAIYQFDMAV 297 (472)
T ss_dssp CBCTTTCCBCCTTEESSCCEEEEEECSSCEEEEETTSCEEEESEEEECSCHHHHHTTSSEEESCCCHHHHHHHHHSEEEC
T ss_pred ccccccccccccEEEcCCEEEEEEEcCCcEEEEECCCCEEEcCEEEEecCHHHhccCCeeECCCCCHHHHHHHHhcCCcc
Confidence 65 679999999999999999999999999899999999999999998754 3556777788889998888
Q ss_pred -ceEEEecCCCCcCCCC-C-----------Ccceee-eccc-CCCceEEEEEccc----ccCCCC-----CCCCeEEecC
Q 035870 296 -SDIFLHRDKRFMPQNP-A-----------AWSAWN-FLES-FDSKVCLTYWLNV----LQNLGE-----TSLPFLVTLN 351 (842)
Q Consensus 296 -~~v~l~~~~~~~p~~~-~-----------~~~~~~-~~~~-~~~~~~v~~~~~~----l~~l~~-----~~~~~~~~l~ 351 (842)
.++++.++.++|+... . ....|. +... ++....+..+... +..+.+ .+.+.+..+.
T Consensus 298 ~~kv~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~a~~~~~~~~~e~~~~~l~~L~~~~ 377 (472)
T 1b37_A 298 YTKIFLKFPRKFWPEGKGREFFLYASSRRGYYGVWQEFEKQYPDANVLLVTVTDEESRRIEQQSDEQTKAEIMQVLRKMF 377 (472)
T ss_dssp EEEEEEECSSCCSCCSTTCSEEEECCSSTTSSCEEEECTTTSTTCCEEEEEEEHHHHHHHHTSCHHHHHHHHHHHHHHHC
T ss_pred eeEEEEECCCcCCCCCCCcceEEecccCCccceeeecccCCCCCCCEEEEEechHHHHHHHhCCHHHHHHHHHHHHHHHc
Confidence 6899999998887521 1 001121 1111 2333333332211 111111 1112222333
Q ss_pred CCC---CCcc-eeEEEEc------CCCCCCHHHHHHHHhhhhhcCCCCeEEeccccC---CCCCchhHhHHHHHHHHhcC
Q 035870 352 PDH---VPEH-TLLKWST------GHPVPSVAASKASLELDHIQGKRGIWFCGAYQG---YGFHEDGLKAGMTAAHGVLG 418 (842)
Q Consensus 352 ~~~---~~~~-~~~~w~~------~~p~~~~~~~~~~~~~~~~~~~~~l~~aG~~~g---~G~~e~A~~SG~~aA~~Il~ 418 (842)
|.. .+.. .+.+|.. +++.+.++.... ....-.++.++|||||+++. .|.+++|+.||+++|++|+.
T Consensus 378 Pg~~~~~~~~~~~~~W~~~~~~~G~~~~~~~g~~~~-~~~~l~~p~~~l~fAG~~t~~~~~g~v~GA~~SG~~aA~~i~~ 456 (472)
T 1b37_A 378 PGKDVPDATDILVPRWWSDRFYKGTFSNWPVGVNRY-EYDQLRAPVGRVYFTGEHTSEHYNGYVHGAYLSGIDSAEILIN 456 (472)
T ss_dssp TTSCCCCCSEEECCCTTTCTTTSSSEEECBTTCCHH-HHHHHHCCBTTEEECSGGGCTTTTTSHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCceEEecccCCCCCCCcccCCCCCCCChh-HHHHHhccCCcEEEeecccCCCCCCchhHHHHHHHHHHHHHHH
Confidence 221 1211 3346621 222233332211 11112567789999999874 44569999999999999975
No 24
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=99.95 E-value=5.3e-27 Score=257.56 Aligned_cols=351 Identities=12% Similarity=0.081 Sum_probs=226.7
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCeEEEEecCCCCCCCceeEee--CCeee-ecceEeecCCCchhHHHHHHHcCCCccc
Q 035870 1 MRVAVIGAGISGLVSAYVLAKAGVEVVLYEKDDYLGGHAKTVTF--DGVDL-DLGFMVFNRVTYPNMMEFFESLGVDMEM 77 (842)
Q Consensus 1 kdV~IIGaGiaGLsaA~~L~~~G~~V~VlEa~~~~GG~~~s~~~--~g~~~-d~G~~~~~~~~~~~~~~l~~~lGl~~~~ 77 (842)
+||+|||||++||++|+.|+++|++|+|+|+++++||+++|... .|+.+ |.|+|+++. .++++.++++++|.....
T Consensus 4 ~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~~~~~~~~~g~~~~~~G~~~~~~-~~~~~~~~~~~l~~~~~~ 82 (384)
T 2bi7_A 4 KKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHIGGNSYDARDSETNVMVHVYGPHIFHT-DNETVWNYVNKHAEMMPY 82 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSSGGGCEEECTTTCCEEETTSCCCEEE-SCHHHHHHHHTTSCEEEC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCcCCccccccccCCCceEeeCCceEECC-CCHHHHHHHHHHhhhccc
Confidence 48999999999999999999999999999999999999999988 78876 999999974 788999999999863211
Q ss_pred ccceeeEeccCCCceeeCCCCCCcchhhhhhccCChHHHHHHHHHHhhhHHHHHHHHhhcCCCCCCccccHHHHHHhcCC
Q 035870 78 SDMSFSVSLEKGHGCEWGSRNGLSSLFAQKKNVLNPYFWQMLREIIKFKDDVLGYLEELESNPDIDRSETLGQFVNSRGY 157 (842)
Q Consensus 78 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~ 157 (842)
.. .. ....+|+.+.++. ++..+.......+.+. +. ..++....... ..++.|+++|+.+. +
T Consensus 83 ~~-~~-~~~~~g~~~~~P~--~~~~~~~l~~~~~~~~------~~-------~~~l~~~~~~~-~~~~~sl~e~~~~~-~ 143 (384)
T 2bi7_A 83 VN-RV-KATVNGQVFSLPI--NLHTINQFFSKTCSPD------EA-------RALIAEKGDST-IADPQTFEEEALRF-I 143 (384)
T ss_dssp CC-CE-EEEETTEEEEESC--CHHHHHHHTTCCCCHH------HH-------HHHHHHHSCCS-CSSCCBHHHHHHHH-H
T ss_pred cc-ce-EEEECCEEEECCC--ChhHHHHHhcccCCHH------HH-------HHHHHHhhhcc-CCCCcCHHHHHHHh-h
Confidence 11 11 1223455444432 1111110000001111 00 11111111111 23678999999988 8
Q ss_pred CHHHHHHHHHHhhhcccCCCchhhccCCHHHHHHHHhhccccccCCCCceE-EecCChhHHHHHHHHHhhhcCceEEeCC
Q 035870 158 SELFQKAYLIPICGSIWSCPSEGVTSFSAFSVLSFCRNHHLLQLFGRPQWL-TVRWRSHSYVNKVRKQLESWGCQIRTSS 236 (842)
Q Consensus 158 ~~~~~~~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~gG~~~l~~~L~~~l~~~G~~i~~~~ 236 (842)
++.+.+.++.|++.++|+.++++++...+. .+............+.|. +++||+++++++|++.. |++|++|+
T Consensus 144 g~~~~~~~~~p~~~~~~~~~~~~ls~~~~~---r~~~~~~~~~~~~~~~~~~~p~gG~~~l~~~l~~~~---g~~I~l~~ 217 (384)
T 2bi7_A 144 GKELYEAFFKGYTIKQWGMQPSELPASILK---RLPVRFNYDDNYFNHKFQGMPKCGYTQMIKSILNHE---NIKVDLQR 217 (384)
T ss_dssp CHHHHHHHTHHHHHHHHSSCGGGSBGGGCC---SCCCCSSSCCCSCCCSEEEEETTHHHHHHHHHHCST---TEEEEESC
T ss_pred cHHHHHHHHHHHHHHHhCCCHHHhCHHHHh---ccccccccccccccccccEEECcCHHHHHHHHHhcC---CCEEEECC
Confidence 899999999999999999999998543321 000000000111123454 89999999999999754 88999999
Q ss_pred Cee-EEEeCCCcEEEEeCCCcEEeCCEEEEccChHHHHHhhcCCCChHHHHhccccceeece-EEEecCCCCcCCCCCCc
Q 035870 237 EVC-SVLPADKGCTIVCGDGSREFYNSCVMALHAPDALKILGNQATFDETRILGAFQYVYSD-IFLHRDKRFMPQNPAAW 314 (842)
Q Consensus 237 ~V~-~I~~~~~~v~V~~~~G~~~~ad~VV~A~p~~~~~~ll~~~~~~~~~~~l~~~~~~~~~-v~l~~~~~~~p~~~~~~ 314 (842)
+|+ +|.. .||+||+|+|++.+.++ .+.+++|.+.. +.+.+|+.+ + .
T Consensus 218 ~V~~~i~~---------------~~d~VI~a~p~~~~~~~-----------~lg~l~y~s~~~v~~~~d~~~-~--~--- 265 (384)
T 2bi7_A 218 EFIVEERT---------------HYDHVFYSGPLDAFYGY-----------QYGRLGYRTLDFKKFTYQGDY-Q--G--- 265 (384)
T ss_dssp CCCGGGGG---------------GSSEEEECSCHHHHTTT-----------TTCCCCEEEEEEEEEEEESCS-S--S---
T ss_pred eeehhhhc---------------cCCEEEEcCCHHHHHHh-----------hcCCCCcceEEEEEEEeCCCC-C--C---
Confidence 999 7852 29999999999987765 25678999964 445555222 1 1
Q ss_pred cee-eecccCCCceEEEEEcccccCCCCCCCCeEEecCCCCCCcceeEEEE----cCCCCCCHHHHHHHHhhhhhcCC-C
Q 035870 315 SAW-NFLESFDSKVCLTYWLNVLQNLGETSLPFLVTLNPDHVPEHTLLKWS----TGHPVPSVAASKASLELDHIQGK-R 388 (842)
Q Consensus 315 ~~~-~~~~~~~~~~~v~~~~~~l~~l~~~~~~~~~~l~~~~~~~~~~~~w~----~~~p~~~~~~~~~~~~~~~~~~~-~ 388 (842)
.+| +|.........++.+.+-...+.. ...+..+. ....|. ..+|.++.++...+.++.+.... +
T Consensus 266 ~~~~n~~~~~~~~~ri~~~~~~~~~~~~--~~~~v~~e-------~~~~~~~~~~p~ypv~~~~~~~~~~~~~~~~~~~~ 336 (384)
T 2bi7_A 266 CAVMNYCSVDVPYTRITEHKYFSPWEQH--DGSVCYKE-------YSRACEENDIPYYPIRQMGEMALLEKYLSLAENET 336 (384)
T ss_dssp SSEEEECSTTSSSSEEEEGGGGCTTSCC--SEEEEEEE-------EEEECCTTCCCCEECCCHHHHHHHHHHHHHHTTCS
T ss_pred CEEEEecCCCCCeeeEEEeeccCCCCCC--CCEEEEEE-------EeccccCCCccccccCChhHHHHHHHHHHHHhcCC
Confidence 234 554322111223333222222211 11111111 111343 35788888999888888875554 8
Q ss_pred CeEEeccccC--CCCCchhHhHHHHHHHHhcC
Q 035870 389 GIWFCGAYQG--YGFHEDGLKAGMTAAHGVLG 418 (842)
Q Consensus 389 ~l~~aG~~~g--~G~~e~A~~SG~~aA~~Il~ 418 (842)
||+|||.|.+ .+.+++|+.||..+|++|++
T Consensus 337 ~~~~~Gr~~~~~~~~~~d~i~sa~~~a~~~~~ 368 (384)
T 2bi7_A 337 NITFVGRLGTYRYLDMDVTIAEALKTAEVYLN 368 (384)
T ss_dssp SEEECHHHHTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred CEEEccccEEEEeCCHHHHHHHHHHHHHHHhh
Confidence 9999998643 34459999999999999976
No 25
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=99.94 E-value=3.6e-27 Score=257.44 Aligned_cols=355 Identities=13% Similarity=0.135 Sum_probs=227.2
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCeEEEEecCCCCCCCceeEeeCCeeee-cceEeecCCCchhHHHHHHHcCCCccccc
Q 035870 1 MRVAVIGAGISGLVSAYVLAKAGVEVVLYEKDDYLGGHAKTVTFDGVDLD-LGFMVFNRVTYPNMMEFFESLGVDMEMSD 79 (842)
Q Consensus 1 kdV~IIGaGiaGLsaA~~L~~~G~~V~VlEa~~~~GG~~~s~~~~g~~~d-~G~~~~~~~~~~~~~~l~~~lGl~~~~~~ 79 (842)
+||+|||||++||+||++|+++|++|+|+|+++++||++++...+|+.++ .|+++++. .++.+.++++++|.......
T Consensus 2 ~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~~~~~~~g~~~~~~G~~~~~~-~~~~~~~~~~~l~~~~~~~~ 80 (367)
T 1i8t_A 2 YDYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHIGGNAYTEDCEGIQIHKYGAHIFHT-NDKYIWDYVNDLVEFNRFTN 80 (367)
T ss_dssp EEEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSSSGGGCEEEETTEEEETTSCCCEEE-SCHHHHHHHHTTSCBCCCCC
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCCCcceEeeccCCceeeccCCceecC-CCHHHHHHHHHhhhhhhccc
Confidence 48999999999999999999999999999999999999999999999995 99999964 57888899999886433222
Q ss_pred ceeeEeccCCCceeeCCCCCCcchhhhhhccCChHHHHHHHHHHhhhHHHHHHHHhhcCCCCCCccccHHHHHHhcCCCH
Q 035870 80 MSFSVSLEKGHGCEWGSRNGLSSLFAQKKNVLNPYFWQMLREIIKFKDDVLGYLEELESNPDIDRSETLGQFVNSRGYSE 159 (842)
Q Consensus 80 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~ 159 (842)
.. ....+|+.+.++. +...+.. ......+ .....++..........++.|+++|+.++ +++
T Consensus 81 ~~--~~~~~g~~~~~p~--~~~~~~~-l~~~~~~-------------~~~~~~l~~~~~~~~~~~~~s~~~~~~~~-~g~ 141 (367)
T 1i8t_A 81 SP--LAIYKDKLFNLPF--NMNTFHQ-MWGVKDP-------------QEAQNIINAQKKKYGDKVPENLEEQAISL-VGE 141 (367)
T ss_dssp CC--EEEETTEEEESSB--SHHHHHH-HHCCCCH-------------HHHHHHHHHHTTTTCCCCCCSHHHHHHHH-HHH
T ss_pred cc--eEEECCeEEEcCC--CHHHHHH-HhccCCH-------------HHHHHHHHHHhhccCCCCCccHHHHHHHH-HhH
Confidence 22 1223454444322 1111100 0000011 01111122111111123678999999988 888
Q ss_pred HHHHHHHHHhhhcccCCCchhhccCCHHHHHHHHhhccccccCCCCceE-EecCChhHHHHHHHHHhhhcCceEEeCCCe
Q 035870 160 LFQKAYLIPICGSIWSCPSEGVTSFSAFSVLSFCRNHHLLQLFGRPQWL-TVRWRSHSYVNKVRKQLESWGCQIRTSSEV 238 (842)
Q Consensus 160 ~~~~~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~gG~~~l~~~L~~~l~~~G~~i~~~~~V 238 (842)
.+.+.++.|++.++|+.++++++..... ..............+.|. +++||+++++++|++ |++|++|++|
T Consensus 142 ~~~~~~~~p~~~~~~~~~~~~lsa~~~~---~l~~~~~~~~~~~~~~~~~~p~gG~~~l~~~l~~-----g~~i~l~~~V 213 (367)
T 1i8t_A 142 DLYQALIKGYTEKQWGRSAKELPAFIIK---RIPVRFTFDNNYFSDRYQGIPVGGYTKLIEKMLE-----GVDVKLGIDF 213 (367)
T ss_dssp HHHHHHTHHHHHHHHSSCGGGSCTTSSC---CCCBCSSSCCCSCCCSEEECBTTCHHHHHHHHHT-----TSEEECSCCG
T ss_pred HHHHHHHHHHHhhhhCCChHHcCHHHHh---hceeeeccccccccchhhcccCCCHHHHHHHHhc-----CCEEEeCCce
Confidence 9999999999999999999998654321 000000000111134454 899999999999987 5799999999
Q ss_pred eEEEeCCCcEEEEeCCCcEEeCCEEEEccChHHHHHhhcCCCChHHHHhccccceeeceE-EEecCCCCcCCCCCCccee
Q 035870 239 CSVLPADKGCTIVCGDGSREFYNSCVMALHAPDALKILGNQATFDETRILGAFQYVYSDI-FLHRDKRFMPQNPAAWSAW 317 (842)
Q Consensus 239 ~~I~~~~~~v~V~~~~G~~~~ad~VV~A~p~~~~~~ll~~~~~~~~~~~l~~~~~~~~~v-~l~~~~~~~p~~~~~~~~~ 317 (842)
++|.. +| ++.||+||+|+|+..+.++ .+.+++|.+..+ .+.++.+.+|. ..| +
T Consensus 214 ~~i~~---~v--------~~~~D~VV~a~p~~~~~~~-----------~l~~l~y~s~~~v~~~~d~~~~~~--~~~--~ 267 (367)
T 1i8t_A 214 LKDKD---SL--------ASKAHRIIYTGPIDQYFDY-----------RFGALEYRSLKFETERHEFPNFQG--NAV--I 267 (367)
T ss_dssp GGSHH---HH--------HTTEEEEEECSCHHHHTTT-----------TTCCCCEEEEEEEEEEESSSCSSS--SSE--E
T ss_pred eeech---hh--------hccCCEEEEeccHHHHHHH-----------hhCCCCCceEEEEEEEeccccCCC--CeE--E
Confidence 98863 12 2469999999999876543 356889999654 46678776653 223 3
Q ss_pred eecccCCCceEEEEEcccccCCCCCCCCeEEecCCCCCCcceeEEEE----cCCCCCCHHHHHHHHhhhh-hcCCCCeEE
Q 035870 318 NFLESFDSKVCLTYWLNVLQNLGETSLPFLVTLNPDHVPEHTLLKWS----TGHPVPSVAASKASLELDH-IQGKRGIWF 392 (842)
Q Consensus 318 ~~~~~~~~~~~v~~~~~~l~~l~~~~~~~~~~l~~~~~~~~~~~~w~----~~~p~~~~~~~~~~~~~~~-~~~~~~l~~ 392 (842)
++.........++.+.+-... .. ...+..+.. ...|. ..+|.++........++.+ .++.+||+|
T Consensus 268 ~~~~~~~~~~ri~~~~~~~~~-~~--~~~~v~~e~-------~~~~~~~~~p~ypv~~~~~~~~~~~~~~~~~~~~~~~~ 337 (367)
T 1i8t_A 268 NFTDANVPYTRIIEHKHFDYV-ET--KHTVVTKEY-------PLEWKVGDEPYYPVNDNKNMELFKKYRELASREDKVIF 337 (367)
T ss_dssp EECCTTSSCSEEEEGGGGSCC-CC--SCEEEEEEE-------EEECCTTSCCCEECCSHHHHHHHHHHHHHHHHCTTEEE
T ss_pred EeCCCCCceeeEEeecccCCC-CC--CCEEEEEEE-------ecccCCCCeeecccCChhHHHHHHHHHHHHhcCCCEEE
Confidence 333211111222222221111 00 111111110 01232 2577888888888877776 456789999
Q ss_pred ecccc--CCCCCchhHhHHHHHHHHhcCC
Q 035870 393 CGAYQ--GYGFHEDGLKAGMTAAHGVLGK 419 (842)
Q Consensus 393 aG~~~--g~G~~e~A~~SG~~aA~~Il~~ 419 (842)
||.|. +.+.+++|+.||..+|++|+..
T Consensus 338 ~Gr~~~~~y~~~~d~i~sa~~~a~~~~~~ 366 (367)
T 1i8t_A 338 GGRLAEYKYYDMHQVISAALYQVKNIMST 366 (367)
T ss_dssp CSTTTTTSCCCHHHHHHHHHHHHHHHHSC
T ss_pred cccceeeEecCHHHHHHHHHHHHHHHhcc
Confidence 99863 3344499999999999999753
No 26
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=99.94 E-value=9.4e-28 Score=265.39 Aligned_cols=360 Identities=11% Similarity=0.087 Sum_probs=221.8
Q ss_pred CcEEEECCChHHHHHHHHHHhC-CCeEEEEecCCCCCCCceeEee--CCeee-ecceEeecCCCchhHHHHHHHcCCCcc
Q 035870 1 MRVAVIGAGISGLVSAYVLAKA-GVEVVLYEKDDYLGGHAKTVTF--DGVDL-DLGFMVFNRVTYPNMMEFFESLGVDME 76 (842)
Q Consensus 1 kdV~IIGaGiaGLsaA~~L~~~-G~~V~VlEa~~~~GG~~~s~~~--~g~~~-d~G~~~~~~~~~~~~~~l~~~lGl~~~ 76 (842)
+||+|||||++||+||++|+++ |++|+|||+++++||+++|... +|+.+ +.|+++++. .++.+.++++++|+...
T Consensus 8 ~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~GG~~~~~~~~~~g~~~~~~G~~~~~~-~~~~~~~~~~~~g~~~~ 86 (399)
T 1v0j_A 8 FDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHIGGNAYSEAEPQTGIEVHKYGAHLFHT-SNKRVWDYVRQFTDFTD 86 (399)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSSSGGGCEEECTTTCCEEETTSCCCEEE-SCHHHHHHHTTTCCBCC
T ss_pred CCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeeeccccCCCEEEEeCCCcEEcC-CcHHHHHHHHHhhhhhc
Confidence 4899999999999999999999 9999999999999999999988 78888 499999964 68899999999997322
Q ss_pred cccceeeEeccCCCceeeCCCCCCcchhhhhhccCChHHHHHHHHHHhhhHHHHHHHHhhcCCCCCCccccHHHHHHhcC
Q 035870 77 MSDMSFSVSLEKGHGCEWGSRNGLSSLFAQKKNVLNPYFWQMLREIIKFKDDVLGYLEELESNPDIDRSETLGQFVNSRG 156 (842)
Q Consensus 77 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~ 156 (842)
... ....+.+|+.+.++. +...+.......+.+.. +... ..+..... ...++.|+++|+.+.
T Consensus 87 ~~~--~~~~~~~G~~~~~p~--~~~~~~~l~~~~~~~~~---~~~~------l~~~~~~~----~~~~~~s~~e~l~~~- 148 (399)
T 1v0j_A 87 YRH--RVFAMHNGQAYQFPM--GLGLVSQFFGKYFTPEQ---ARQL------IAEQAAEI----DTADAQNLEEKAISL- 148 (399)
T ss_dssp CCC--CEEEEETTEEEEESS--SHHHHHHHHTSCCCHHH---HHHH------HHHHGGGS----CTTC----CCHHHHH-
T ss_pred ccc--ceEEEECCEEEeCCC--CHHHHHHHhcccCCHHH---HHHH------HHHHhhcc----CCCCcccHHHHHHHH-
Confidence 111 112233455444432 11001000000001111 1100 00111111 122578999999985
Q ss_pred CCHHHHHHHHHHhhhcccCCCchhhccCCHHHHHHHHhhccccccCCCCceE-EecCChhHHHHHHHHHhhhcCceEEeC
Q 035870 157 YSELFQKAYLIPICGSIWSCPSEGVTSFSAFSVLSFCRNHHLLQLFGRPQWL-TVRWRSHSYVNKVRKQLESWGCQIRTS 235 (842)
Q Consensus 157 ~~~~~~~~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~gG~~~l~~~L~~~l~~~G~~i~~~ 235 (842)
+++.+.+.++.|++.++|+.++++++...+. .+..............+. +++||+++++++|++.+ |++|++|
T Consensus 149 ~g~~~~~~~~~~~~~~~~~~~~~~ls~~~~~---~~~~~~~~~~~~~~~~~~~~p~gG~~~l~~~l~~~~---g~~I~l~ 222 (399)
T 1v0j_A 149 IGRPLYEAFVKGYTAKQWQTDPKELPAANIT---RLPVRYTFDNRYFSDTYEGLPTDGYTAWLQNMAADH---RIEVRLN 222 (399)
T ss_dssp HCHHHHHHHTHHHHHHHHTSCGGGSCGGGCS---CCCCCSSSCCCSCCCSEEECBTTHHHHHHHHHTCST---TEEEECS
T ss_pred HhHHHHHHHHHHHHHhhcCCChhhcChHhhh---cceeEeccccchhhhhhcccccccHHHHHHHHHhcC---CeEEEEC
Confidence 7888899999999999999999988543221 000000000011122453 88999999999999855 8899999
Q ss_pred CCeeEEEeCCCcEEEEeCCCcEE-eCCEEEEccChHHHHHhhcCCCChHHHHhccccceee-ceEEEecCCCCcCCCCCC
Q 035870 236 SEVCSVLPADKGCTIVCGDGSRE-FYNSCVMALHAPDALKILGNQATFDETRILGAFQYVY-SDIFLHRDKRFMPQNPAA 313 (842)
Q Consensus 236 ~~V~~I~~~~~~v~V~~~~G~~~-~ad~VV~A~p~~~~~~ll~~~~~~~~~~~l~~~~~~~-~~v~l~~~~~~~p~~~~~ 313 (842)
++|++|... | + ++ .||+||+|+|+..+.++ .+.+++|.+ ..+.+.++.+..+ ..
T Consensus 223 ~~V~~I~~~---v-----~--~~~~aD~VI~t~p~~~l~~~-----------~l~~l~y~s~~~~~~~~~~~~~~---~~ 278 (399)
T 1v0j_A 223 TDWFDVRGQ---L-----R--PGSPAAPVVYTGPLDRYFDY-----------AEGRLGWRTLDFEVEVLPIGDFQ---GT 278 (399)
T ss_dssp CCHHHHHHH---H-----T--TTSTTCCEEECSCHHHHTTT-----------TTCCCCEEEEEEEEEEESSSCSS---SS
T ss_pred Cchhhhhhh---h-----h--hcccCCEEEECCcHHHHHhh-----------hhCCCCcceEEEEEEEEccccCC---CC
Confidence 999999643 2 1 35 79999999999987654 356789988 3455555654222 22
Q ss_pred cceeeecccCCCceEEEEEcccccCCC-CCCCCeEEecCCCCCCcceeEEEE----cCCCCCCHHHHHHHHhhhhhc-CC
Q 035870 314 WSAWNFLESFDSKVCLTYWLNVLQNLG-ETSLPFLVTLNPDHVPEHTLLKWS----TGHPVPSVAASKASLELDHIQ-GK 387 (842)
Q Consensus 314 ~~~~~~~~~~~~~~~v~~~~~~l~~l~-~~~~~~~~~l~~~~~~~~~~~~w~----~~~p~~~~~~~~~~~~~~~~~-~~ 387 (842)
| .+++.........++.+.+-.+... .. ...+..+.. ...|. ..+|.++..+...+.++.+.. +.
T Consensus 279 ~-~~~~~~~~~~~~ri~~~~~~~~~~~~~~-~~~~v~~e~-------~~~~~~~~~~~ypv~~~~~~~~~~~~~~~~~~~ 349 (399)
T 1v0j_A 279 A-VMNYNDLDVPYTRIHEFRHFHPERDYPT-DKTVIMREY-------SRFAEDDDEPYYPINTEADRALLATYRARAKSE 349 (399)
T ss_dssp S-EEEECCTTSSCSEEEEGGGGCTTSCCCS-SCEEEEEEE-------EEECCTTSCCCEECCCHHHHHHHHHHHHHHHHH
T ss_pred e-EEEeCCCCCCcceeEeecCCCCCCcCCC-CCeEEEEee-------cccccCCCccccccCcHHHHHHHHHHHHHHHhc
Confidence 2 2444432111223344433222221 11 111111111 01232 247788888887777766633 34
Q ss_pred ---CCeEEecccc--CCCCCchhHhHHHHHHHHhcC
Q 035870 388 ---RGIWFCGAYQ--GYGFHEDGLKAGMTAAHGVLG 418 (842)
Q Consensus 388 ---~~l~~aG~~~--g~G~~e~A~~SG~~aA~~Il~ 418 (842)
+||||||+|+ +.+.+|+|+.||.++|++|+.
T Consensus 350 ~~~~~v~~~G~~~~~~~~~~e~~i~sa~~~a~~l~~ 385 (399)
T 1v0j_A 350 TASSKVLFGGRLGTYQYLDMHMAIASALNMYDNVLA 385 (399)
T ss_dssp HHHHCEEECHHHHHTCCCCHHHHHHHHHHHHHHTHH
T ss_pred cccCCEEEccceEEEEecCHHHHHHHHHHHHHHHhh
Confidence 7999999863 334459999999999999974
No 27
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=99.94 E-value=5.1e-26 Score=260.48 Aligned_cols=395 Identities=16% Similarity=0.147 Sum_probs=228.2
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCeEEEEecCCCCCCCceeEe--eCCeeeecceEeecCCCchhHHHHHHHcCCCcccc
Q 035870 1 MRVAVIGAGISGLVSAYVLAKAGVEVVLYEKDDYLGGHAKTVT--FDGVDLDLGFMVFNRVTYPNMMEFFESLGVDMEMS 78 (842)
Q Consensus 1 kdV~IIGaGiaGLsaA~~L~~~G~~V~VlEa~~~~GG~~~s~~--~~g~~~d~G~~~~~~~~~~~~~~l~~~lGl~~~~~ 78 (842)
+||+|||||++||+||+.|++.|++|+|||+++++||++.|.. ..|+.+|.|++++. ...+.+.++++++|+.....
T Consensus 34 ~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~gg~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~g~~~~~~ 112 (498)
T 2iid_A 34 KHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPGGRVRTYRNEEAGWYANLGPMRLP-EKHRIVREYIRKFDLRLNEF 112 (498)
T ss_dssp CEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSSBTTCCEEEETTTTEEEESSCCCEE-TTCHHHHHHHHHTTCCEEEE
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCceeeeccCCCCchhhcCccccc-chHHHHHHHHHHhCCCceee
Confidence 4899999999999999999999999999999999999999988 46899999999995 45677889999999875432
Q ss_pred cc--eeeEeccCCCceeeC----CCCCCcc-hhhhhhccCChH-HHHHHHHHHhhhHH--HHHHHHhhcCCCCCCccccH
Q 035870 79 DM--SFSVSLEKGHGCEWG----SRNGLSS-LFAQKKNVLNPY-FWQMLREIIKFKDD--VLGYLEELESNPDIDRSETL 148 (842)
Q Consensus 79 ~~--~~~~~~~~g~~~~~~----~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~s~ 148 (842)
.. ...+...+|...... .+..+.. +........... +............. ....... .+..++
T Consensus 113 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~s~ 185 (498)
T 2iid_A 113 SQENDNAWYFIKNIRKKVGEVKKDPGLLKYPVKPSEAGKSAGQLYEESLGKVVEELKRTNCSYILNK-------YDTYST 185 (498)
T ss_dssp CSCCTTSEEEETTEEEEHHHHHHCGGGGCCCCCGGGTTCCHHHHHHHHTHHHHHHHHHSCHHHHHHH-------HTTSBH
T ss_pred cccCCccEEEeCCeeecccccccCccccccCCCccccCCCHHHHHHHHHHHHHHHHhhccHHHHHHH-------hhhhhH
Confidence 11 000111122111000 0000000 000000000000 00011110000000 0000000 146789
Q ss_pred HHHHHhcC-CCHHHHHHHHHHhhhcccCCCchhhccCCHHHHHHHHhhccccccCCCCceEEecCChhHHHHHHHHHhhh
Q 035870 149 GQFVNSRG-YSELFQKAYLIPICGSIWSCPSEGVTSFSAFSVLSFCRNHHLLQLFGRPQWLTVRWRSHSYVNKVRKQLES 227 (842)
Q Consensus 149 ~~~l~~~~-~~~~~~~~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG~~~l~~~L~~~l~~ 227 (842)
.+|+...+ ++...... +..++.... ....+....+..... ......++.++||++.++++|++.+.+
T Consensus 186 ~~~l~~~~~~~~~~~~~-~~~~~~~~~------~~~~~~~~~~~~~~~-----~~~~~~~~~~~gG~~~l~~~l~~~l~~ 253 (498)
T 2iid_A 186 KEYLIKEGDLSPGAVDM-IGDLLNEDS------GYYVSFIESLKHDDI-----FAYEKRFDEIVDGMDKLPTAMYRDIQD 253 (498)
T ss_dssp HHHHHHTSCCCHHHHHH-HHHHTTCGG------GTTSBHHHHHHHHHH-----HTTCCCEEEETTCTTHHHHHHHHHTGG
T ss_pred HHHHHHccCCCHHHHHH-HHHhcCccc------chhHHHHHHHHHHhc-----cccCcceEEeCCcHHHHHHHHHHhccc
Confidence 99998865 44443322 222211100 000011111110000 012356789999999999999999953
Q ss_pred cCceEEeCCCeeEEEeCCCcEEEEeCCCc----EEeCCEEEEccChHHHHHhh-cCCCChHHHHhccccceee-ceEEEe
Q 035870 228 WGCQIRTSSEVCSVLPADKGCTIVCGDGS----REFYNSCVMALHAPDALKIL-GNQATFDETRILGAFQYVY-SDIFLH 301 (842)
Q Consensus 228 ~G~~i~~~~~V~~I~~~~~~v~V~~~~G~----~~~ad~VV~A~p~~~~~~ll-~~~~~~~~~~~l~~~~~~~-~~v~l~ 301 (842)
+|++|++|++|..++++|.|++.+|+ ++.||+||+|+|+..+.++. .+++++...+++++++|.+ .++++.
T Consensus 254 ---~i~~~~~V~~I~~~~~~v~v~~~~~~~~~~~~~ad~vI~t~p~~~~~~i~f~p~Lp~~~~~ai~~l~~~~~~kv~l~ 330 (498)
T 2iid_A 254 ---KVHFNAQVIKIQQNDQKVTVVYETLSKETPSVTADYVIVCTTSRAVRLIKFNPPLLPKKAHALRSVHYRSGTKIFLT 330 (498)
T ss_dssp ---GEESSCEEEEEEECSSCEEEEEECSSSCCCEEEESEEEECSCHHHHTTSEEESCCCHHHHHHHHHCCEECEEEEEEE
T ss_pred ---ccccCCEEEEEEECCCeEEEEEecCCcccceEEeCEEEECCChHHHhheecCCCCCHHHHHHHHhCCCcceeEEEEE
Confidence 89999999999999999999887775 48999999999999888763 4557778888999999998 689999
Q ss_pred cCCCCcCCCCC--C--c----ceeeecc---cCCCceEEEEEcc-c----ccCCCCC-----CCCeEEecCCCCCC----
Q 035870 302 RDKRFMPQNPA--A--W----SAWNFLE---SFDSKVCLTYWLN-V----LQNLGET-----SLPFLVTLNPDHVP---- 356 (842)
Q Consensus 302 ~~~~~~p~~~~--~--~----~~~~~~~---~~~~~~~v~~~~~-~----l~~l~~~-----~~~~~~~l~~~~~~---- 356 (842)
|+.++|+.... . + ..+.+.. .|++..++..+.. . +..+.+. +.+.+..+.+...+
T Consensus 331 ~~~~~w~~~~~~~~~~~~~~~~~~~~~~s~~~p~g~~~L~~~~~g~~a~~~~~~~~~~~~~~~l~~L~~~~g~~~~~~~~ 410 (498)
T 2iid_A 331 CTTKFWEDDGIHGGKSTTDLPSRFIYYPNHNFTNGVGVIIAYGIGDDANFFQALDFKDCADIVFNDLSLIHQLPKKDIQS 410 (498)
T ss_dssp ESSCGGGGGTCCSSEEEESSTTCEEECCSSCCTTSCEEEEEEEEHHHHHTTTTSCHHHHHHHHHHHHHHHHTCCHHHHHH
T ss_pred eCCCCccCCCccCCcccCCCCcceEEECCCCCCCCCcEEEEEeCCccHhhhhcCCHHHHHHHHHHHHHHHcCCChhhhhh
Confidence 99998865321 0 0 0111111 2344444444432 1 1111111 11112222221111
Q ss_pred ---cceeEEEEc------CCCCCCHHHHHHHHhhhhhcCCCCeEEecccc--CCCCCchhHhHHHHHHHHhcCC
Q 035870 357 ---EHTLLKWST------GHPVPSVAASKASLELDHIQGKRGIWFCGAYQ--GYGFHEDGLKAGMTAAHGVLGK 419 (842)
Q Consensus 357 ---~~~~~~w~~------~~p~~~~~~~~~~~~~~~~~~~~~l~~aG~~~--g~G~~e~A~~SG~~aA~~Il~~ 419 (842)
..++.+|.. ++..+.++..... ...-.++.++|||||+++ ..|++++|+.||+++|++|++.
T Consensus 411 ~~~~~~~~~W~~~p~~~G~~~~~~~~~~~~~-~~~l~~p~~~l~fAGe~t~~~~g~~~GAi~SG~raA~~i~~~ 483 (498)
T 2iid_A 411 FCYPSVIQKWSLDKYAMGGITTFTPYQFQHF-SDPLTASQGRIYFAGEYTAQAHGWIDSTIKSGLRAARDVNLA 483 (498)
T ss_dssp HEEEEEEEEGGGCTTTCSSEECCCTTHHHHH-HHHHHCCBTTEEECSGGGSSSSSCHHHHHHHHHHHHHHHHHH
T ss_pred hcCccEEEecCCCCCCCceeeecCCcchHHH-HHHHhCCCCcEEEEEcccccCCcCHHHHHHHHHHHHHHHHHH
Confidence 124456753 1111222222211 111144678999999976 3466699999999999999763
No 28
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=99.94 E-value=1.3e-25 Score=264.79 Aligned_cols=382 Identities=16% Similarity=0.153 Sum_probs=220.0
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCeEEEEecCCCCCCCceeEee-CCeeeecceEeecCCCchhHHHHHHHcCCCccccc
Q 035870 1 MRVAVIGAGISGLVSAYVLAKAGVEVVLYEKDDYLGGHAKTVTF-DGVDLDLGFMVFNRVTYPNMMEFFESLGVDMEMSD 79 (842)
Q Consensus 1 kdV~IIGaGiaGLsaA~~L~~~G~~V~VlEa~~~~GG~~~s~~~-~g~~~d~G~~~~~~~~~~~~~~l~~~lGl~~~~~~ 79 (842)
+||+|||||++||+||+.|++.|++|+|+|+++++||+++|... +|+.+|.|++++++.....+..+++++|+......
T Consensus 337 ~~v~viG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~ggri~T~~~~~G~~vd~Ga~~i~G~~~np~~~l~~~lGl~~~~~~ 416 (776)
T 4gut_A 337 KSVIIIGAGPAGLAAARQLHNFGIKVTVLEAKDRIGGRVWDDKSFKGVTVGRGAQIVNGCINNPVALMCEQLGISMHKFG 416 (776)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCTTCCEECCSTTCCEESSCCEEECCTTCHHHHHHHHHTCCCEECC
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCcEEEEecccceeceeeeccccCCeEeccCCeEEeCCccChHHHHHHHhCCcccccc
Confidence 48999999999999999999999999999999999999999876 68999999999976555667789999999865543
Q ss_pred ceeeEeccCCCceeeCCCCCCcchhhhhhccCChHHHHHHHHHHhhhHHHHHHHHhhcCCCCCCccccHHHH--------
Q 035870 80 MSFSVSLEKGHGCEWGSRNGLSSLFAQKKNVLNPYFWQMLREIIKFKDDVLGYLEELESNPDIDRSETLGQF-------- 151 (842)
Q Consensus 80 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~-------- 151 (842)
....+...+|.. ..+........... ...+.............+.++.++
T Consensus 417 ~~~~l~~~~g~~-------------------~~~~~~~~~~~~~~---~ll~~~~~~~~~~~~~~d~sl~~~~~~~~~~~ 474 (776)
T 4gut_A 417 ERCDLIQEGGRI-------------------TDPTIDKRMDFHFN---ALLDVVSEWRKDKTQLQDVPLGEKIEEIYKAF 474 (776)
T ss_dssp SCCCEECTTSCB-------------------CCHHHHHHHHHHHH---HHHHHHHHHGGGCCGGGCCBHHHHHHHHHHHH
T ss_pred cccceEccCCcc-------------------cchhHHHHHHHHHH---HHHHHHHHHhhcccccccccHHHHHHHHHHHH
Confidence 322222222211 01111111111000 001111110000011123444443
Q ss_pred HHhcCCCHHHH-H---HHHHHhhhcccCCCchhhccCCHHHHHHHHhhccccccCCCCceEEecCChhHHHHHHHHHhhh
Q 035870 152 VNSRGYSELFQ-K---AYLIPICGSIWSCPSEGVTSFSAFSVLSFCRNHHLLQLFGRPQWLTVRWRSHSYVNKVRKQLES 227 (842)
Q Consensus 152 l~~~~~~~~~~-~---~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG~~~l~~~L~~~l~~ 227 (842)
+...+..-... . .+..+.+....+.....++. .. +....... ...+....+++|++.++++|++
T Consensus 475 l~~~gv~~~~l~~~~l~~~~~~l~~~~G~~l~~ls~---~~----~~~~~~~~-~~~G~~~~~~~G~~~l~~aLa~---- 542 (776)
T 4gut_A 475 IKESGIQFSELEGQVLQFHLSNLEYACGSNLHQVSA---RS----WDHNEFFA-QFAGDHTLLTPGYSVIIEKLAE---- 542 (776)
T ss_dssp HHHSCCCCCHHHHHHHHHHHHHHHHHHTSCTTSBBT---TT----TTGGGGSC-CCCSCEEECTTCTHHHHHHHHT----
T ss_pred HHhcCCCccchhHHHHHHHHHHHHHhcCCChHHcCh---hh----hhhhhhHH-hcCCCeEEECChHHHHHHHHHh----
Confidence 33332210000 0 01111111112222222210 00 00000000 1234567788999999999886
Q ss_pred cCceEEeCCCeeEEEeCCCcEEEEeCCCcEEeCCEEEEccChHHHHHh---hcCCCChHHHHhccccceee-ceEEEecC
Q 035870 228 WGCQIRTSSEVCSVLPADKGCTIVCGDGSREFYNSCVMALHAPDALKI---LGNQATFDETRILGAFQYVY-SDIFLHRD 303 (842)
Q Consensus 228 ~G~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VV~A~p~~~~~~l---l~~~~~~~~~~~l~~~~~~~-~~v~l~~~ 303 (842)
|++|+++++|++|+.++++|.|++.+|+++.||+||+|+|+..+.+. +.+++++...+++..+++.+ .++++.|+
T Consensus 543 -gl~I~l~t~V~~I~~~~~~v~V~~~~G~~i~Ad~VIvA~P~~vL~~~~i~f~P~Lp~~~~~ai~~l~~g~~~KV~l~f~ 621 (776)
T 4gut_A 543 -GLDIQLKSPVQCIDYSGDEVQVTTTDGTGYSAQKVLVTVPLALLQKGAIQFNPPLSEKKMKAINSLGAGIIEKIALQFP 621 (776)
T ss_dssp -TSCEESSCCEEEEECSSSSEEEEETTCCEEEESEEEECCCHHHHHTTCSEEESCCCHHHHHHHHHEEEECCEEEEEECS
T ss_pred -CCcEEcCCeeEEEEEcCCEEEEEECCCcEEEcCEEEECCCHHHHhhcccccCCCCCHHHHHHHHhCCCeeEEEEEEecC
Confidence 66899999999999999999999999989999999999999998752 44557788889999999998 69999999
Q ss_pred CCCcCCC---CCC------------cceeeecccCCC-ceEEEEEccc-----ccCCCCC-----CCCeEEecCCC-CC-
Q 035870 304 KRFMPQN---PAA------------WSAWNFLESFDS-KVCLTYWLNV-----LQNLGET-----SLPFLVTLNPD-HV- 355 (842)
Q Consensus 304 ~~~~p~~---~~~------------~~~~~~~~~~~~-~~~v~~~~~~-----l~~l~~~-----~~~~~~~l~~~-~~- 355 (842)
.++|+.. ... +....+...+.+ ..++..++.. +..+.+. +.+.+..+.+. ..
T Consensus 622 ~~FW~~~~~g~~~fG~l~~~~~~~~~~~~~~d~~p~g~~~vL~~~i~G~~a~~l~~lsdeel~~~~l~~L~~ifg~~~~~ 701 (776)
T 4gut_A 622 YRFWDSKVQGADFFGHVPPSASKRGLFAVFYDMDPQKKHSVLMSVIAGEAVASVRTLDDKQVLQQCMATLRELFKEQEVP 701 (776)
T ss_dssp SCTTHHHHTTCSEEEECCSSGGGTTEEEEEEESCTTSCSCEEEEEECTHHHHHHHTSCHHHHHHHHHHHHHHHTTTSCCC
T ss_pred cccccccCCCCceEEeecCCcCCCceEEEEecCCCCCCceEEEEEecchhHHHHHcCCHHHHHHHHHHHHHHHhCccccc
Confidence 9988642 010 101112222332 2344434331 1122111 11223333322 22
Q ss_pred -Ccc-eeEEEEc---CCCCCC---HHHH-HHHHhhhhhcCCCCeEEeccccC---CCCCchhHhHHHHHHHHhcC
Q 035870 356 -PEH-TLLKWST---GHPVPS---VAAS-KASLELDHIQGKRGIWFCGAYQG---YGFHEDGLKAGMTAAHGVLG 418 (842)
Q Consensus 356 -~~~-~~~~w~~---~~p~~~---~~~~-~~~~~~~~~~~~~~l~~aG~~~g---~G~~e~A~~SG~~aA~~Il~ 418 (842)
|.. .+.+|.. ....|. ++.. .....+. .+..++|||||+++. .|+++||+.||.++|++|++
T Consensus 702 ~P~~~~vt~W~~dp~s~Gsys~~~~g~~~~~~~~L~-~p~~grL~FAGE~Ts~~~~gtveGAi~SG~RaA~~Ila 775 (776)
T 4gut_A 702 DPTKYFVTRWSTDPWIQMAYSFVKTGGSGEAYDIIA-EDIQGTVFFAGEATNRHFPQTVTGAYLSGVREASKIAA 775 (776)
T ss_dssp CCSEEEECCGGGCTTTCCSEEEEBTTCCTHHHHHHH-CCBTTTEEECSGGGCSSSCSSHHHHHHHHHHHHHHHHC
T ss_pred CcceEEEecCCCCCccCCCCCccCCCCchhHHHHHh-CcCCCcEEEEehhhcCCCCcCHHHHHHHHHHHHHHHHh
Confidence 222 4457743 111111 1110 1111111 122479999999874 56679999999999999975
No 29
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.93 E-value=1.8e-25 Score=239.14 Aligned_cols=238 Identities=18% Similarity=0.253 Sum_probs=195.3
Q ss_pred CchHHhhhhh-hhhhcCChHHHHhccCCC-CcccccccCCCcccHHHHHHHHHHHHHHHcC-CCCCCeEEEeccCchHHH
Q 035870 568 NTLTQARRNI-SRHYDLSNELFSLFLDES-MTYSCAVFKSEDEDLKAAQMRKVSLLIEKAR-VSKGQEVLEIGCGWGTLA 644 (842)
Q Consensus 568 ~~~~~~~~~i-~~~Yd~~~~~~~~~l~~~-~~ys~~~~~~~~~~l~~aq~~~~~~l~~~l~-~~~~~~vLDiGcG~G~~~ 644 (842)
|...++++++ ..|||.+++++..+.++. +.|+.++|.. ...+.+++. +.+++.+. ++++.+|||||||+|.++
T Consensus 57 ~~~~g~~~~i~~~~y~~~~~~~~~~~~~~~~~y~~~~f~~-~~~~~~~~~---~~l~~~l~~~~~~~~vLDiGcG~G~~~ 132 (312)
T 3vc1_A 57 NLRLGDVDGLYHHHYGIGPVDRAALGDPEHSEYEKKVIAE-LHRLESAQA---EFLMDHLGQAGPDDTLVDAGCGRGGSM 132 (312)
T ss_dssp HHHHHTTTTCCCCSCCCSCCCHHHHCCTTSTTHHHHHHHH-HHHHHHHHH---HHHHTTSCCCCTTCEEEEESCTTSHHH
T ss_pred hhhcccccchhhhhcCCchhHHHhhcCCCccccchHHHhh-hhhHHHHHH---HHHHHHhccCCCCCEEEEecCCCCHHH
Confidence 4556777788 899999999999999988 9999999875 234444444 57788887 889999999999999999
Q ss_pred HHHHHhcCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCc-cCCCccEEEEcchhhhcChhhHHHHHHHHHh
Q 035870 645 IEIVKRTGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLA-KANKYDRIISCEMIEAVGHEFMEEFFGCCES 723 (842)
Q Consensus 645 ~~la~~~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~-~~~~fD~i~s~~~~~~~~~~~~~~~~~~~~~ 723 (842)
..+++..+++|+|+|+|+++++.|+++++..++.++++++++|+.+++ ++++||+|+++.+++|++ +..+++++.+
T Consensus 133 ~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l~~~~---~~~~l~~~~~ 209 (312)
T 3vc1_A 133 VMAHRRFGSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTPFDKGAVTASWNNESTMYVD---LHDLFSEHSR 209 (312)
T ss_dssp HHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTCEEEEEEESCGGGSC---HHHHHHHHHH
T ss_pred HHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCCCCCCCEeEEEECCchhhCC---HHHHHHHHHH
Confidence 999998788999999999999999999999999889999999999987 668999999999999994 7999999999
Q ss_pred ccccCcEEEEEeecCCCcccccccCccchhhhcccCCCCCCCHHHHHHHHhhcCCcEEEEEEecCccHHHHHHHHHHHHH
Q 035870 724 LLAEDGLLVLQFISIPDERYNEYRLSSDFIKEYIFPGGCLPSLSRITSAMSVASRLCVEQVENIGIHYYQTLRCWRKNFM 803 (842)
Q Consensus 724 ~LkpgG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~gf~v~~~~~~~~~y~~tl~~w~~~~~ 803 (842)
+|||||++++.+....... ........++..+.++ .+++..++.+.+++ +||+++.+++++ ..++..|..+|.
T Consensus 210 ~LkpgG~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~--~~~s~~~~~~~l~~-aGf~~~~~~~~~---~~~~~~w~~~~~ 282 (312)
T 3vc1_A 210 FLKVGGRYVTITGCWNPRY-GQPSKWVSQINAHFEC--NIHSRREYLRAMAD-NRLVPHTIVDLT---PDTLPYWELRAT 282 (312)
T ss_dssp HEEEEEEEEEEEEEECTTT-CSCCHHHHHHHHHHTC--CCCBHHHHHHHHHT-TTEEEEEEEECH---HHHHHHHHHHTT
T ss_pred HcCCCcEEEEEEccccccc-cchhHHHHHHHhhhcC--CCCCHHHHHHHHHH-CCCEEEEEEeCC---HHHHHHHHHHHH
Confidence 9999999999876654422 1111223344444444 37889999988887 899999999987 478899999988
Q ss_pred HhHHHHHhccCCHHHHHHHH
Q 035870 804 EKQSKILALGFNDKFIRTWE 823 (842)
Q Consensus 804 ~~~~~~~~~g~~~~~~r~w~ 823 (842)
+. ...|+++.|.+.++
T Consensus 283 ~~----~~~g~~~~~~~~~~ 298 (312)
T 3vc1_A 283 SS----LVTGIEKAFIESYR 298 (312)
T ss_dssp ST----TCCSCHHHHHHHHH
T ss_pred Hh----hhhcChHHHHHHHH
Confidence 55 35578888877544
No 30
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=99.92 E-value=4.6e-24 Score=250.74 Aligned_cols=209 Identities=13% Similarity=0.147 Sum_probs=134.7
Q ss_pred CceEEecCChhHHHHHHHHHhhhcCceEEeCCCeeEEEeCCCcEEEEeCC------CcEEeCCEEEEccChHHHHHh---
Q 035870 205 PQWLTVRWRSHSYVNKVRKQLESWGCQIRTSSEVCSVLPADKGCTIVCGD------GSREFYNSCVMALHAPDALKI--- 275 (842)
Q Consensus 205 ~~~~~~~gG~~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v~V~~~~------G~~~~ad~VV~A~p~~~~~~l--- 275 (842)
+.++.++||+++|+++|++. .+|++|++|++|.+++++|.|++.+ |+++.||+||+|+|+.+++++
T Consensus 391 g~~~~~~gG~~~l~~~La~~-----l~I~l~~~V~~I~~~~~~v~V~~~~~~~~~~~~~~~Ad~VI~tvP~~vL~~l~~~ 465 (662)
T 2z3y_A 391 GSHLTVRNGYSCVPVALAEG-----LDIKLNTAVRQVRYTASGCEVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQPPA 465 (662)
T ss_dssp SCCEEETTCTTHHHHHHTTT-----CEEETTEEEEEEEEETTEEEEEEEESSCTTCEEEEEESEEEECCCHHHHHCSSCS
T ss_pred CceeeecCcHHHHHHHHHhc-----CceecCCeEEEEEECCCcEEEEEeecccCCCCeEEEeCEEEECCCHHHHhcccCc
Confidence 45789999999999999874 4899999999999999999998866 568999999999999999873
Q ss_pred --hcCCCChHHHHhccccceee-ceEEEecCCCCcCCCCCCcce-----------eeecccCCCceEEEEEccc----cc
Q 035870 276 --LGNQATFDETRILGAFQYVY-SDIFLHRDKRFMPQNPAAWSA-----------WNFLESFDSKVCLTYWLNV----LQ 337 (842)
Q Consensus 276 --l~~~~~~~~~~~l~~~~~~~-~~v~l~~~~~~~p~~~~~~~~-----------~~~~~~~~~~~~v~~~~~~----l~ 337 (842)
+.|++++...+++++++|.+ .++++.|+.++|+.....+.. +.+.......+++.+..+. +.
T Consensus 466 i~f~P~LP~~k~~Ai~~l~~g~~~KV~l~f~~~fW~~~~~~~G~l~~~~~~~~~~~~~~~~~~~~vL~~~~~G~~a~~~~ 545 (662)
T 2z3y_A 466 VQFVPPLPEWKTSAVQRMGFGNLNKVVLCFDRVFWDPSVNLFGHVGSTTASRGELFLFWNLYKAPILLALVAGEAAGIME 545 (662)
T ss_dssp SEEESCCCHHHHHHHHHSEECCCEEEEEECSSCCSCTTCSEEEECCSSSTTTTEEEEEECCSSSSEEEEEECTHHHHHHT
T ss_pred eEEcCCCCHHHHHHHHhCCccceeEEEEEcCcccccCCCCceeeecCCCCCCCceeEEEeCCCCCEEEEEeccHhHHHHH
Confidence 45557777888999999999 699999999999764211100 1111111223333333221 11
Q ss_pred CCCCC-----CCCeEEec-CCCC--CCcc-eeEEEEc------CCCCCCHHH----HHHHHhhh--------hhcCCCCe
Q 035870 338 NLGET-----SLPFLVTL-NPDH--VPEH-TLLKWST------GHPVPSVAA----SKASLELD--------HIQGKRGI 390 (842)
Q Consensus 338 ~l~~~-----~~~~~~~l-~~~~--~~~~-~~~~w~~------~~p~~~~~~----~~~~~~~~--------~~~~~~~l 390 (842)
.+.+. ..+.+..+ +... .|.. .+.+|.. +++.+.++. ......+. ..++.++|
T Consensus 546 ~lsdee~~~~~l~~L~~~~g~~~~~~p~~~~v~~W~~dp~~~Gsys~~~pg~~~~~~~~l~~p~~~~~~~~~~~~~~grl 625 (662)
T 2z3y_A 546 NISDDVIVGRCLAILKGIFGSSAVPQPKETVVSRWRADPWARGSYSYVAAGSSGNDYDLMAQPITPGPSIPGAPQPIPRL 625 (662)
T ss_dssp TSCHHHHHHHHHHHHHHHHCTTSSCCCSEEEECCTTTCTTTSSSCEECBTTCCTHHHHHHHCCBCC---------CCCCE
T ss_pred hCCHHHHHHHHHHHHHHHhCCcccCCCceeEEEEECCCCCCCcccccCCCCCchhhHHHHhCcCccccccccccCCCCcE
Confidence 11111 11122222 2222 2333 4557754 222222222 11111111 02345799
Q ss_pred EEeccccC---CCCCchhHhHHHHHHHHhcC
Q 035870 391 WFCGAYQG---YGFHEDGLKAGMTAAHGVLG 418 (842)
Q Consensus 391 ~~aG~~~g---~G~~e~A~~SG~~aA~~Il~ 418 (842)
||||+++. .|+++||+.||.++|++|+.
T Consensus 626 ~FAGe~ts~~~~g~v~GAi~SG~raA~~i~~ 656 (662)
T 2z3y_A 626 FFAGEHTIRNYPATVHGALLSGLREAGRIAD 656 (662)
T ss_dssp EECSGGGCTTSTTSHHHHHHHHHHHHHHHHH
T ss_pred EEEeccccCCCCcCHHHHHHHHHHHHHHHHH
Confidence 99999774 56779999999999999975
No 31
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=99.92 E-value=1.7e-24 Score=256.76 Aligned_cols=209 Identities=13% Similarity=0.160 Sum_probs=135.1
Q ss_pred CceEEecCChhHHHHHHHHHhhhcCceEEeCCCeeEEEeCCCcEEEEeCC------CcEEeCCEEEEccChHHHHHh---
Q 035870 205 PQWLTVRWRSHSYVNKVRKQLESWGCQIRTSSEVCSVLPADKGCTIVCGD------GSREFYNSCVMALHAPDALKI--- 275 (842)
Q Consensus 205 ~~~~~~~gG~~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v~V~~~~------G~~~~ad~VV~A~p~~~~~~l--- 275 (842)
+.++.++||++.|+++|++.+ +|++|++|++|.+++++|.|++.+ |+++.||+||+|+|+.++.++
T Consensus 562 g~~~~~~gG~~~L~~aLa~~l-----~I~Lnt~V~~I~~~~~gV~V~~~~~~~~~~g~~i~AD~VIvTvPl~vLk~l~~~ 636 (852)
T 2xag_A 562 GSHLTVRNGYSCVPVALAEGL-----DIKLNTAVRQVRYTASGCEVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQPPA 636 (852)
T ss_dssp SCCEEETTCTTHHHHHHTTTC-----CEECSEEEEEEEEETTEEEEEEEESSSTTCEEEEEESEEEECCCHHHHHCSSCS
T ss_pred CceEEecCcHHHHHHHHHhCC-----CEEeCCeEEEEEEcCCcEEEEEeecccCCCCeEEECCEEEECCCHHHHHhhhcc
Confidence 457899999999999998754 799999999999999999998765 568999999999999999874
Q ss_pred --hcCCCChHHHHhccccceee-ceEEEecCCCCcCCCCCCcce-----------eeecccCCCceEEEEEcc-c----c
Q 035870 276 --LGNQATFDETRILGAFQYVY-SDIFLHRDKRFMPQNPAAWSA-----------WNFLESFDSKVCLTYWLN-V----L 336 (842)
Q Consensus 276 --l~~~~~~~~~~~l~~~~~~~-~~v~l~~~~~~~p~~~~~~~~-----------~~~~~~~~~~~~v~~~~~-~----l 336 (842)
+.+.++....+++.+++|.+ .+|++.|+.++|+.....+.. +.+.......+++ .++. . +
T Consensus 637 I~F~P~LP~~k~~AI~~l~~g~v~KV~L~F~~~fW~~~~~~fG~l~~~~~~~~~l~~~~~~~~~pvLl-~~v~G~~a~~l 715 (852)
T 2xag_A 637 VQFVPPLPEWKTSAVQRMGFGNLNKVVLCFDRVFWDPSVNLFGHVGSTTASRGELFLFWNLYKAPILL-ALVAGEAAGIM 715 (852)
T ss_dssp SEEESCCCHHHHHHHHHSEECCCEEEEEECSSCCSCTTCCEEEECCSSSTTTTTTCEEEECSSSSEEE-EEECHHHHHHG
T ss_pred cccCCCCCHHHHHHHHcCCccceEEEEEEcCCcccCCCCCeeeeeccccCCCCceEEEecCCCCCEEE-EEecCcCHHHH
Confidence 44557777788899999988 699999999999753211100 0111111223333 3433 1 1
Q ss_pred cCCCCC-----CCCeEEec-CCCC--CCcc-eeEEEEc------CCCCCCHHH----HHHHHhhh--------hhcCCCC
Q 035870 337 QNLGET-----SLPFLVTL-NPDH--VPEH-TLLKWST------GHPVPSVAA----SKASLELD--------HIQGKRG 389 (842)
Q Consensus 337 ~~l~~~-----~~~~~~~l-~~~~--~~~~-~~~~w~~------~~p~~~~~~----~~~~~~~~--------~~~~~~~ 389 (842)
..+.+. +.+.+..+ +... .|.. .+.+|.. +++.+.++. ......+. ..++.++
T Consensus 716 ~~lsdeel~~~~l~~L~~ifG~~~~~~P~~~~vtrW~~dp~s~GsYs~~~pG~~~~~~~~L~~P~~~~~~~p~~~~~~gr 795 (852)
T 2xag_A 716 ENISDDVIVGRCLAILKGIFGSSAVPQPKETVVSRWRADPWARGSYSYVAAGSSGNDYDLMAQPITPGPSIPGAPQPIPR 795 (852)
T ss_dssp GGSCHHHHHHHHHHHHHHHHCTTTCCCCSEEEECCTTTCTTTSSSCEECBTTCCTTHHHHTTSCBCCCCSSTTCCCCCCC
T ss_pred hcCCHHHHHHHHHHHHHHHhCccccCCceEEEEEecCCCCCcCccccccCCCcchhhHHHHhCccccccccccccCCCCc
Confidence 111111 11122222 2222 2333 4557754 222222222 11111110 0234579
Q ss_pred eEEeccccC---CCCCchhHhHHHHHHHHhcCC
Q 035870 390 IWFCGAYQG---YGFHEDGLKAGMTAAHGVLGK 419 (842)
Q Consensus 390 l~~aG~~~g---~G~~e~A~~SG~~aA~~Il~~ 419 (842)
|||||+++. .|+++||+.||.++|++|+..
T Consensus 796 L~FAGE~Ts~~~~gtveGAi~SG~RAA~~Il~~ 828 (852)
T 2xag_A 796 LFFAGEHTIRNYPATVHGALLSGLREAGRIADQ 828 (852)
T ss_dssp EEECSGGGCTTSTTSHHHHHHHHHHHHHHHHHH
T ss_pred EEEEehhHhCCCCcCHHHHHHHHHHHHHHHHHH
Confidence 999999874 567799999999999999863
No 32
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=99.92 E-value=1.4e-24 Score=235.68 Aligned_cols=204 Identities=13% Similarity=0.107 Sum_probs=138.5
Q ss_pred ceEEecCChhHHHHHHHHHhhhcCceEEeCCCeeEEEeCCCcEEEEeCCCcEEeCCEEEEccChHHHHHhhcC---CCCh
Q 035870 206 QWLTVRWRSHSYVNKVRKQLESWGCQIRTSSEVCSVLPADKGCTIVCGDGSREFYNSCVMALHAPDALKILGN---QATF 282 (842)
Q Consensus 206 ~~~~~~gG~~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VV~A~p~~~~~~ll~~---~~~~ 282 (842)
..+...+|+..+++.|++.+ |++|+++++|++|+.++++|.|++.+|+++.||.||+|+|++.+.+++.+ .+++
T Consensus 103 ~~~~~~~g~~~l~~~l~~~~---g~~i~~~~~V~~i~~~~~~~~v~~~~g~~~~ad~vV~A~p~~~~~~ll~~~~~~l~~ 179 (342)
T 3qj4_A 103 CNFVAPQGISSIIKHYLKES---GAEVYFRHRVTQINLRDDKWEVSKQTGSPEQFDLIVLTMPVPEILQLQGDITTLISE 179 (342)
T ss_dssp EEEECTTCTTHHHHHHHHHH---TCEEESSCCEEEEEECSSSEEEEESSSCCEEESEEEECSCHHHHTTCBSTHHHHSCH
T ss_pred cceecCCCHHHHHHHHHHhc---CCEEEeCCEEEEEEEcCCEEEEEECCCCEEEcCEEEECCCHHHHHHHhcccccccCH
Confidence 46778899999999999988 89999999999999999999999999987899999999999999999864 2345
Q ss_pred HHHHhccccceee-ceEEEecCCCCcCCCC--------CCcceeeecc-c-C-----CCceEEEEEccc-----ccCCCC
Q 035870 283 DETRILGAFQYVY-SDIFLHRDKRFMPQNP--------AAWSAWNFLE-S-F-----DSKVCLTYWLNV-----LQNLGE 341 (842)
Q Consensus 283 ~~~~~l~~~~~~~-~~v~l~~~~~~~p~~~--------~~~~~~~~~~-~-~-----~~~~~v~~~~~~-----l~~l~~ 341 (842)
...+.+.+++|.+ .+++++|+.+++.... .....|.+.. . + ++..++...... ..++.+
T Consensus 180 ~~~~~l~~~~~~~~~~v~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~k~~r~~~~~~~~~v~~~~~~~~~~~~~~~~ 259 (342)
T 3qj4_A 180 CQRQQLEAVSYSSRYALGLFYEAGTKIDVPWAGQYITSNPCIRFVSIDNKKRNIESSEIGPSLVIHTTVPFGVTYLEHSI 259 (342)
T ss_dssp HHHHHHHTCCBCCEEEEEEECSSCC--CCSCSEEECSSCSSEEEEEEHHHHTTCCCC-CCCEEEEEECHHHHHHTTTSCH
T ss_pred HHHHHHhcCCccccEEEEEEECCCCccCCceeeEEccCCcceEEEEccccCCCCCCCCCCceEEEECCHHHHHHhhcCCH
Confidence 6688999999999 5788999875332110 0001222211 0 1 112233333321 111111
Q ss_pred -----CCCCeEEec-CCCCCCcc-eeEEEEcCCCCCCHHHHHHHHhhhhh--cCCCCeEEecccc-CCCCCchhHhHHHH
Q 035870 342 -----TSLPFLVTL-NPDHVPEH-TLLKWSTGHPVPSVAASKASLELDHI--QGKRGIWFCGAYQ-GYGFHEDGLKAGMT 411 (842)
Q Consensus 342 -----~~~~~~~~l-~~~~~~~~-~~~~w~~~~p~~~~~~~~~~~~~~~~--~~~~~l~~aG~~~-g~G~~e~A~~SG~~ 411 (842)
.+.+.+..+ +....|.. .+++|.++.|.+... .++... ...++|++||||+ |.|+ |+|+.||.+
T Consensus 260 ~~~~~~~~~~l~~~~g~~~~p~~~~v~rW~~a~p~~~~~-----~~~~~~~~~~~~~l~laGd~~~g~~v-~~ai~sg~~ 333 (342)
T 3qj4_A 260 EDVQELVFQQLENILPGLPQPIATKCQKWRHSQVTNAAA-----NCPGQMTLHHKPFLACGGDGFTQSNF-DGCITSALC 333 (342)
T ss_dssp HHHHHHHHHHHHHHSCSCCCCSEEEEEEETTCSBSSCCS-----SSCSCEEEETTTEEEECSGGGSCSSH-HHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccCCCCCceeeeccccccccccccC-----CCcceeEecCCccEEEEccccCCCCc-cHHHHHHHH
Confidence 011122222 22223443 677999999988651 122222 4668999999977 5666 999999999
Q ss_pred HHHHhcC
Q 035870 412 AAHGVLG 418 (842)
Q Consensus 412 aA~~Il~ 418 (842)
+|++|+.
T Consensus 334 aa~~i~~ 340 (342)
T 3qj4_A 334 VLEALKN 340 (342)
T ss_dssp HHHHHTT
T ss_pred HHHHHHh
Confidence 9999975
No 33
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.91 E-value=1.6e-23 Score=218.91 Aligned_cols=210 Identities=19% Similarity=0.269 Sum_probs=176.8
Q ss_pred HHHHHHHHHcCCCCCCeEEEeccCchHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCc-cC
Q 035870 616 RKVSLLIEKARVSKGQEVLEIGCGWGTLAIEIVKRTGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLA-KA 694 (842)
Q Consensus 616 ~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~-~~ 694 (842)
...+.+++.+.++++.+|||||||+|.++..+++..+++|+|+|+|+.+++.|+++.... ++++++++|+.+++ ++
T Consensus 42 ~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~---~~~~~~~~d~~~~~~~~ 118 (266)
T 3ujc_A 42 EATKKILSDIELNENSKVLDIGSGLGGGCMYINEKYGAHTHGIDICSNIVNMANERVSGN---NKIIFEANDILTKEFPE 118 (266)
T ss_dssp HHHHHHTTTCCCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHTCCSC---TTEEEEECCTTTCCCCT
T ss_pred HHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhhcC---CCeEEEECccccCCCCC
Confidence 445678888888999999999999999999999977889999999999999999887554 48999999999987 67
Q ss_pred CCccEEEEcchhhhcChhhHHHHHHHHHhccccCcEEEEEeecCCCcccccccCccchhhhcccC-CCCCCCHHHHHHHH
Q 035870 695 NKYDRIISCEMIEAVGHEFMEEFFGCCESLLAEDGLLVLQFISIPDERYNEYRLSSDFIKEYIFP-GGCLPSLSRITSAM 773 (842)
Q Consensus 695 ~~fD~i~s~~~~~~~~~~~~~~~~~~~~~~LkpgG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~p-~~~~~~~~~~~~~~ 773 (842)
++||+|+++.+++|++.+++..++++++++|||||++++.++..+... .....+..++.+ +..+++..++.+.+
T Consensus 119 ~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~l 193 (266)
T 3ujc_A 119 NNFDLIYSRDAILALSLENKNKLFQKCYKWLKPTGTLLITDYCATEKE-----NWDDEFKEYVKQRKYTLITVEEYADIL 193 (266)
T ss_dssp TCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEESCGG-----GCCHHHHHHHHHHTCCCCCHHHHHHHH
T ss_pred CcEEEEeHHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEEEeccCCcc-----cchHHHHHHHhcCCCCCCCHHHHHHHH
Confidence 899999999999999877799999999999999999999987655411 011222333333 23567899998888
Q ss_pred hhcCCcEEEEEEecCccHHHHHHHHHHHHHHhHHHHHhccCCHHHHHH----HHHHHHHHHHhccc
Q 035870 774 SVASRLCVEQVENIGIHYYQTLRCWRKNFMEKQSKILALGFNDKFIRT----WEYYFDYCAAGFKS 835 (842)
Q Consensus 774 ~~~~gf~v~~~~~~~~~y~~tl~~w~~~~~~~~~~~~~~g~~~~~~r~----w~~y~~~~~~~f~~ 835 (842)
.+ +||++++.+.++.+|..++..|.+++.++++++.+. +++...+. |+.|+..|+.++..
T Consensus 194 ~~-~Gf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~ 257 (266)
T 3ujc_A 194 TA-CNFKNVVSKDLSDYWNQLLEVEHKYLHENKEEFLKL-FSEKKFISLDDGWSRKIKDSKRKMQR 257 (266)
T ss_dssp HH-TTCEEEEEEECHHHHHHHHHHHHHHHHHTHHHHHHH-SCHHHHHHHHHHHHHHHHHHHTTSEE
T ss_pred HH-cCCeEEEEEeCCHHHHHHHHHHHHHHHhCHHHHHHh-cCHHHHHHHHHHHHHHHHHHHcCccc
Confidence 87 899999999999999999999999999999998877 66655444 99999999988754
No 34
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.91 E-value=4.4e-24 Score=224.34 Aligned_cols=225 Identities=15% Similarity=0.173 Sum_probs=174.7
Q ss_pred cccHHHHHHHHHHHHHHHcCCCCCCeEEEeccCchHHHHHHHHhcC--CEEEEEcCCHH------HHHHHHHHHHHcCCC
Q 035870 607 DEDLKAAQMRKVSLLIEKARVSKGQEVLEIGCGWGTLAIEIVKRTG--CKYTGITLSEE------QLKYAEMKVKEAGLQ 678 (842)
Q Consensus 607 ~~~l~~aq~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~--~~v~gid~s~~------~~~~a~~~~~~~~l~ 678 (842)
..++..+|.++...+++.+.++++.+|||||||+|.++..+++..+ ++|+|+|+|+. +++.|++++...++.
T Consensus 21 ~~~~~~~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~ 100 (275)
T 3bkx_A 21 ARTIQRRQTAHRLAIAEAWQVKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLG 100 (275)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTG
T ss_pred chHHHHHHHHHHHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCC
Confidence 4578999999999999999999999999999999999999998843 89999999997 999999999988887
Q ss_pred CCeEEEEcc-cc--CCc-cCCCccEEEEcchhhhcChhhHHHHHHHHHhccccCcEEEEEeecCCCcccccccCc-cchh
Q 035870 679 DLIRLYLCD-YR--QLA-KANKYDRIISCEMIEAVGHEFMEEFFGCCESLLAEDGLLVLQFISIPDERYNEYRLS-SDFI 753 (842)
Q Consensus 679 ~~v~~~~~d-~~--~~~-~~~~fD~i~s~~~~~~~~~~~~~~~~~~~~~~LkpgG~~~~~~~~~~~~~~~~~~~~-~~~~ 753 (842)
++++++++| +. .++ ++++||+|+++.+++|+++ ...+++.++++++|||++++.++..+.......... ..+.
T Consensus 101 ~~v~~~~~d~~~~~~~~~~~~~fD~v~~~~~l~~~~~--~~~~~~~~~~l~~~gG~l~~~~~~~~~~~~~~~~~~~~~~~ 178 (275)
T 3bkx_A 101 DRLTVHFNTNLSDDLGPIADQHFDRVVLAHSLWYFAS--ANALALLFKNMAAVCDHVDVAEWSMQPTALDQIGHLQAAMI 178 (275)
T ss_dssp GGEEEECSCCTTTCCGGGTTCCCSEEEEESCGGGSSC--HHHHHHHHHHHTTTCSEEEEEEECSSCSSGGGHHHHHHHHH
T ss_pred CceEEEECChhhhccCCCCCCCEEEEEEccchhhCCC--HHHHHHHHHHHhCCCCEEEEEEecCCCCchhhhhHHHHHHH
Confidence 789999998 43 334 5689999999999999987 566788888888889999999887765422211110 0011
Q ss_pred hhcc---c---CC--CCCCCHHHHHHHHhhcCCcEEEEEEecCccHHHHHH--HHHHHHHHhHHHHH-h-ccCCHHHHHH
Q 035870 754 KEYI---F---PG--GCLPSLSRITSAMSVASRLCVEQVENIGIHYYQTLR--CWRKNFMEKQSKIL-A-LGFNDKFIRT 821 (842)
Q Consensus 754 ~~~i---~---p~--~~~~~~~~~~~~~~~~~gf~v~~~~~~~~~y~~tl~--~w~~~~~~~~~~~~-~-~g~~~~~~r~ 821 (842)
+... . +. ..+++..++.+.+++ +||+++..+.+ |.+|+. .|...+..++.+.. . .||++.|+|+
T Consensus 179 ~~~~~~~~~~~~~~~~~~~s~~~l~~~l~~-aGf~~~~~~~~---~~~~~~~~~W~~~~~~~~~~~~~~~~g~~~~~~~~ 254 (275)
T 3bkx_A 179 QGLLYAIAPSDVANIRTLITPDTLAQIAHD-NTWTYTAGTIV---EDPTLDDAHWEIATTNALLTELKLSTDLRDRVKPL 254 (275)
T ss_dssp HHHHHHHSCCTTCSCCCCCCHHHHHHHHHH-HTCEEEECCCB---CCTTCTHHHHHHHHHHHHHHHSCCCHHHHHHHHHH
T ss_pred HHHHhhccccccccccccCCHHHHHHHHHH-CCCeeEEEEEe---cCCCCCCchhhHHHHHHHHHHHHhhccccHHHHHH
Confidence 1111 0 11 247899999988887 89999988876 667777 89986665554433 3 5799999999
Q ss_pred HHHHHHHHHHhcccCcccccC
Q 035870 822 WEYYFDYCAAGFKSYTLGNYQ 842 (842)
Q Consensus 822 w~~y~~~~~~~f~~~~~~~~q 842 (842)
|.. +|+.| .+.++++|
T Consensus 255 ~~~---~~~~g--~~~~~~~~ 270 (275)
T 3bkx_A 255 LEA---MSHNG--TASLATFT 270 (275)
T ss_dssp HHH---HTTSC--CCCCCEEE
T ss_pred HHH---HHhcc--ccccceee
Confidence 997 56666 45666654
No 35
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.90 E-value=9.9e-24 Score=220.48 Aligned_cols=209 Identities=15% Similarity=0.183 Sum_probs=168.3
Q ss_pred HHHHHHHcC-CCCCCeEEEeccCchHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCc-cCC
Q 035870 618 VSLLIEKAR-VSKGQEVLEIGCGWGTLAIEIVKRTGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLA-KAN 695 (842)
Q Consensus 618 ~~~l~~~l~-~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~-~~~ 695 (842)
...+++.+. ++++.+|||||||+|.++..+++.++++|+|+|+|+.+++.|+++++..+++++++++++|+.+++ +++
T Consensus 34 ~~~~l~~l~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 113 (267)
T 3kkz_A 34 TLKALSFIDNLTEKSLIADIGCGTGGQTMVLAGHVTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLPFRNE 113 (267)
T ss_dssp HHHHHTTCCCCCTTCEEEEETCTTCHHHHHHHTTCSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTT
T ss_pred HHHHHHhcccCCCCCEEEEeCCCCCHHHHHHHhccCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCCCCCC
Confidence 345566665 678999999999999999999998667999999999999999999999999888999999999988 678
Q ss_pred CccEEEEcchhhhcChhhHHHHHHHHHhccccCcEEEEEeecCCCcccccccCccchh-hhcccCCCCCCCHHHHHHHHh
Q 035870 696 KYDRIISCEMIEAVGHEFMEEFFGCCESLLAEDGLLVLQFISIPDERYNEYRLSSDFI-KEYIFPGGCLPSLSRITSAMS 774 (842)
Q Consensus 696 ~fD~i~s~~~~~~~~~~~~~~~~~~~~~~LkpgG~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~p~~~~~~~~~~~~~~~ 774 (842)
+||+|+++.+++|+ + +..+++++.++|||||++++.++......... ....++ .. +| .+++..++.+.+.
T Consensus 114 ~fD~i~~~~~~~~~-~--~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~--~~~~~~~~~--~~--~~~~~~~~~~~l~ 184 (267)
T 3kkz_A 114 ELDLIWSEGAIYNI-G--FERGLNEWRKYLKKGGYLAVSECSWFTDERPA--EINDFWMDA--YP--EIDTIPNQVAKIH 184 (267)
T ss_dssp CEEEEEESSCGGGT-C--HHHHHHHHGGGEEEEEEEEEEEEEESSSCCCH--HHHHHHHHH--CT--TCEEHHHHHHHHH
T ss_pred CEEEEEEcCCceec-C--HHHHHHHHHHHcCCCCEEEEEEeeecCCCChH--HHHHHHHHh--CC--CCCCHHHHHHHHH
Confidence 99999999999999 3 68999999999999999999987643221110 111222 22 22 5678999998888
Q ss_pred hcCCcEEEEEEecC-----ccHHHHHHHHHHHHHHh---HHHHHhc-cCCHHHHHHHHHHHHHHHHhcccC
Q 035870 775 VASRLCVEQVENIG-----IHYYQTLRCWRKNFMEK---QSKILAL-GFNDKFIRTWEYYFDYCAAGFKSY 836 (842)
Q Consensus 775 ~~~gf~v~~~~~~~-----~~y~~tl~~w~~~~~~~---~~~~~~~-g~~~~~~r~w~~y~~~~~~~f~~~ 836 (842)
+ +||++++.+.++ .+|..++..|.+++.+. .+++.++ .....+.|+|+.|+.+|+.+|..+
T Consensus 185 ~-aGf~~v~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~f~~~ 254 (267)
T 3kkz_A 185 K-AGYLPVATFILPENCWTDHYFTPKVAAQKIFLTKYAGNKIAEEFSMLQSIEEELYHKYKEYYGYTFFIA 254 (267)
T ss_dssp H-TTEEEEEEEECCGGGTTTTTHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEE
T ss_pred H-CCCEEEEEEECCHhHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhccccCeEeehh
Confidence 7 899999999887 68999999999999653 2333332 222445899999999999999764
No 36
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=99.89 E-value=1.2e-22 Score=233.88 Aligned_cols=291 Identities=13% Similarity=0.160 Sum_probs=173.7
Q ss_pred CcEEEECCChHHHHHHHHHHhCC--------CeEEEEecCC-CC----------------CCCceeEee-------CCee
Q 035870 1 MRVAVIGAGISGLVSAYVLAKAG--------VEVVLYEKDD-YL----------------GGHAKTVTF-------DGVD 48 (842)
Q Consensus 1 kdV~IIGaGiaGLsaA~~L~~~G--------~~V~VlEa~~-~~----------------GG~~~s~~~-------~g~~ 48 (842)
++|+|||||++||+||++|++.| ++|+|||+++ ++ ||++.+... ++..
T Consensus 57 ~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~~V~v~E~~~~r~~~~~~g~~~~~~~g~~GGr~~t~~~~~~~~~~~~~~ 136 (721)
T 3ayj_A 57 YRIAIVGGGAGGIAALYELGRLAATLPAGSGIDVQIYEADPDSFLHDRPGIKAIKVRGLKAGRVSAALVHNGDPASGDTI 136 (721)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHTTSCTTCEEEEEEECCCTTBGGGCC----CEECTTCEETTEEEEEECSSCGGGCSEE
T ss_pred CeEEEECCCHHHHHHHHHHHHcCcccccCCCceEEEEeccCcccccccchhhHHHhcCcCCceEEEEEccCCcccCCCcE
Confidence 47999999999999999999998 9999999999 99 999999987 4589
Q ss_pred eecceEeecCCCchhHHHHHHHc-CCCcc--c--cc--ceeeEe------ccCCCc-eeeCCCCC-Ccchhhhhhc----
Q 035870 49 LDLGFMVFNRVTYPNMMEFFESL-GVDME--M--SD--MSFSVS------LEKGHG-CEWGSRNG-LSSLFAQKKN---- 109 (842)
Q Consensus 49 ~d~G~~~~~~~~~~~~~~l~~~l-Gl~~~--~--~~--~~~~~~------~~~g~~-~~~~~~~~-~~~~~~~~~~---- 109 (842)
+|.|++++. ..++.+.++++++ |++.. . .. ....+. +.+|.. ..+..... ....+.....
T Consensus 137 ~e~G~~~~~-~~~~~~~~~~~~l~gl~~~~~~~~~~~~~~~~i~~~~~i~~~~g~~~~~~~~~~~p~p~~~~~v~~~~~~ 215 (721)
T 3ayj_A 137 YEVGAMRFP-EIAGLTWHYASAAFGDAAPIKVFPNPGKVPTEFVFGNRVDRYVGSDPKDWEDPDSPTLKVLGVVAGGLVG 215 (721)
T ss_dssp EECSCCCEE-TTCHHHHHHHHHHHCTTCBCCBCCCBTTBCEEEEETTEEEEESSSCGGGBSSTTCHHHHHHHHHHHHHTC
T ss_pred EecCCEEec-CccHHHHHHHHHhcCCcccccccccCCCCceEEEecCceeeecCccceecccccccCHHHHHHHHHHHHH
Confidence 999999995 4677888999999 98622 1 11 111110 122222 22222111 0111110000
Q ss_pred cC-------------ChH-HHH----------HHHH--------HHhh------hHHHHHHH-HhhcCCCCCCccccH--
Q 035870 110 VL-------------NPY-FWQ----------MLRE--------IIKF------KDDVLGYL-EELESNPDIDRSETL-- 148 (842)
Q Consensus 110 ~~-------------~~~-~~~----------~~~~--------~~~~------~~~~~~~~-~~~~~~~~~~~~~s~-- 148 (842)
.. ++. ..+ .+.. .++. .......+ .. .+..|+
T Consensus 216 ~~~e~~~~~~~~~~~~p~~v~~ll~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~w~~lla~~-------~d~~S~~~ 288 (721)
T 3ayj_A 216 NPQGENVAMYPIANVDPAKIAAILNAATPPADALERIQTKYWPEFIAQYDGLTLGAAVREIVTVA-------FEKGTLPP 288 (721)
T ss_dssp CSSSSCCCSSCBTTBCHHHHHHHHTCSSCCHHHHHHHHHTHHHHHHHHHTTBBHHHHHHHHHHHH-------HHHTSSCC
T ss_pred HhhhcccccccccccchhhHHHHHHhhhcchhhhhhhhhhhhhhhhhhhccchhhhHHHHHHHHh-------hcccchhH
Confidence 00 000 000 0000 0000 00000000 00 023333
Q ss_pred -HHHHHhcCCCHHHHHHHHHHhhhcccCCCc-hhhccCCHHHHHHHHhhccccccCCCCceEEecCChhHHHHHHHHHhh
Q 035870 149 -GQFVNSRGYSELFQKAYLIPICGSIWSCPS-EGVTSFSAFSVLSFCRNHHLLQLFGRPQWLTVRWRSHSYVNKVRKQLE 226 (842)
Q Consensus 149 -~~~l~~~~~~~~~~~~~~~p~~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG~~~l~~~L~~~l~ 226 (842)
.+|++.. ..+. .....+-...+++.. ......+...++.+... .....++.+.||+++|+++|++.+.
T Consensus 289 ~~~~L~~~---~~~s-~~~~~~~~~~~~~gg~~~~~~~S~le~L~~~~~------~~~~~~~~i~GG~~~L~~aLa~~l~ 358 (721)
T 3ayj_A 289 VDGVLDVD---ESIS-YYVELFGRFGFGTGGFKPLYNISLVEMMRLILW------DYSNEYTLPVTENVEFIRNLFLKAQ 358 (721)
T ss_dssp GGGTSCHH---HHHH-HHHHHHHHHCSSSSCCGGGTTBBHHHHHHHHHT------TTTCEECCSSSSTHHHHHHHHHHHH
T ss_pred HHHHHHhc---cccH-HHHHHHHHHhhccCCCCCccchhHHHHHHHHhc------CCccceeEECCcHHHHHHHHHHhcc
Confidence 4444321 0111 111111111111111 22223355555554421 1234578899999999999999974
Q ss_pred hcCceEEeCCCee--EEEeCCCc-------EEE-EeCCCc--EEeCCEEEEccChHHHHH------hh------------
Q 035870 227 SWGCQIRTSSEVC--SVLPADKG-------CTI-VCGDGS--REFYNSCVMALHAPDALK------IL------------ 276 (842)
Q Consensus 227 ~~G~~i~~~~~V~--~I~~~~~~-------v~V-~~~~G~--~~~ad~VV~A~p~~~~~~------ll------------ 276 (842)
+ |++|+++++|+ +|.+++++ |.| .+.+|+ ++.||+||+|+|...+.. +-
T Consensus 359 ~-g~~I~l~~~V~~~~I~~~~~g~~~~~~~V~V~~~~~G~~~~~~aD~VIvTvP~~~L~~~~~r~~i~~~~~~~~~~~~~ 437 (721)
T 3ayj_A 359 N-VGAGKLVVQVRQERVANACHSGTASARAQLLSYDSHNAVHSEAYDFVILAVPHDQLTPIVSRSGFEHAASQNLGDAGL 437 (721)
T ss_dssp H-HTTTSEEEEEECEEEEEEEECSSSSCCEEEEEEETTCCEEEEEESEEEECSCHHHHHHHHSSSCSSCEEEEEESCGGG
T ss_pred c-CCceEeCCEEEeeeEEECCCCCccccceEEEEEecCCceEEEEcCEEEECCCHHHHhhcccccccccccccccccccc
Confidence 3 67899999999 99987655 888 456776 789999999999998864 21
Q ss_pred ----------cCC-C-C-------hHHHHhccccceee-ceEEEec-----CCCCcCCC
Q 035870 277 ----------GNQ-A-T-------FDETRILGAFQYVY-SDIFLHR-----DKRFMPQN 310 (842)
Q Consensus 277 ----------~~~-~-~-------~~~~~~l~~~~~~~-~~v~l~~-----~~~~~p~~ 310 (842)
.++ + + ....++++++.|.. +|+++.+ +.++|+..
T Consensus 438 ~~~~~~~~~~~pplLlp~~~~~~~~~~~~Ai~~l~~~~s~Kv~l~~~~~~~~~~fW~~~ 496 (721)
T 3ayj_A 438 GLETHTYNQVYPPLLLSDSSPAANARIVTAIGQLHMARSSKVFATVKTAALDQPWVPQW 496 (721)
T ss_dssp TCCCEEEEEEBCSSCCCSSCHHHHHHHHHHHHTCCEECEEEEEEEEEGGGGGSTTSCEE
T ss_pred ccccccccccCCcccCCcccccccHHHHHHHHhcCcccceEEEEEEccccCCCCccccc
Confidence 122 3 5 67789999999999 7999999 88998765
No 37
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.89 E-value=4.1e-26 Score=244.03 Aligned_cols=233 Identities=15% Similarity=0.154 Sum_probs=181.2
Q ss_pred HhccCCCCcccccccCCCcccHHHH---HH----HHHHHHHHHcCCCCCCeEEEeccCchHHHHHHHHhc--CCEEEEEc
Q 035870 589 SLFLDESMTYSCAVFKSEDEDLKAA---QM----RKVSLLIEKARVSKGQEVLEIGCGWGTLAIEIVKRT--GCKYTGIT 659 (842)
Q Consensus 589 ~~~l~~~~~ys~~~~~~~~~~l~~a---q~----~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~la~~~--~~~v~gid 659 (842)
+.|+++.+.|+++|+.....++..+ |. .+.+.+++.+.++++++|||||||+|.++..+++.. +.+|+|+|
T Consensus 28 ~~fl~~~~~y~~~y~~~~~~~l~~~~f~q~~~~~~~~~~l~~~l~~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD 107 (317)
T 1dl5_A 28 EEFLTKSYPLSYVYEDIVLVSYDDGEEYSTSSQPSLMALFMEWVGLDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVE 107 (317)
T ss_dssp GGGCSSCCCHHHHTSSSCEEEEECSSCEEEECCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEE
T ss_pred HHhCCchhccccCccCCCcccccCCCcceeccCHHHHHHHHHhcCCCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEE
Confidence 3578888888888876654244444 33 677888999999999999999999999999999883 35799999
Q ss_pred CCHHHHHHHHHHHHHcCCCCCeEEEEccccCCc-cCCCccEEEEcchhhhcChhhHHHHHHHHHhccccCcEEEEEeecC
Q 035870 660 LSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLA-KANKYDRIISCEMIEAVGHEFMEEFFGCCESLLAEDGLLVLQFISI 738 (842)
Q Consensus 660 ~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~-~~~~fD~i~s~~~~~~~~~~~~~~~~~~~~~~LkpgG~~~~~~~~~ 738 (842)
+|+++++.|+++++..+++ +++++++|+.+.. .+++||+|++..+++|++ +++.++|||||+++++....
T Consensus 108 ~s~~~~~~a~~~~~~~g~~-~v~~~~~d~~~~~~~~~~fD~Iv~~~~~~~~~--------~~~~~~LkpgG~lvi~~~~~ 178 (317)
T 1dl5_A 108 YSRKICEIAKRNVERLGIE-NVIFVCGDGYYGVPEFSPYDVIFVTVGVDEVP--------ETWFTQLKEGGRVIVPINLK 178 (317)
T ss_dssp SCHHHHHHHHHHHHHTTCC-SEEEEESCGGGCCGGGCCEEEEEECSBBSCCC--------HHHHHHEEEEEEEEEEBCBG
T ss_pred CCHHHHHHHHHHHHHcCCC-CeEEEECChhhccccCCCeEEEEEcCCHHHHH--------HHHHHhcCCCcEEEEEECCC
Confidence 9999999999999999887 5999999998855 567899999999999997 36788999999999986554
Q ss_pred C--Ccccccc-cCccchhhhcccCCCCCCCHHHHHHHHhhcCCcEEEEEEecCccHHHHHHHHHH-HHHHhHHHHHhccC
Q 035870 739 P--DERYNEY-RLSSDFIKEYIFPGGCLPSLSRITSAMSVASRLCVEQVENIGIHYYQTLRCWRK-NFMEKQSKILALGF 814 (842)
Q Consensus 739 ~--~~~~~~~-~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~gf~v~~~~~~~~~y~~tl~~w~~-~~~~~~~~~~~~g~ 814 (842)
. +.....+ .....|+.++++|++.+|+...+...+++ . ++. ... ..|..|++.|+. +|.+.++...
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~-~-~~~--~~~--~~y~~tl~~~~~~~f~~~~~~~~---- 248 (317)
T 1dl5_A 179 LSRRQPAFLFKKKDPYLVGNYKLETRFITAGGNLGNLLER-N-RKL--LRE--FPFNREILLVRSHIFVELVDLLT---- 248 (317)
T ss_dssp GGTBCEEEEEEEETTEEEEEEEEECCCCBCCGGGSCHHHH-H-HTT--CCC--CCEEEEEECTTHHHHHHHHHHHH----
T ss_pred CcccceEEEEEEeCCcEEEEEeccEEEEEccCcccccccc-c-hhh--hhc--ccchhhccCcchhhhhhhhhhhc----
Confidence 3 2222222 22356889999999999987776555544 2 211 112 228889999998 9998877643
Q ss_pred CHHHHHHHH-HHHHHHHH--hcccCccccc
Q 035870 815 NDKFIRTWE-YYFDYCAA--GFKSYTLGNY 841 (842)
Q Consensus 815 ~~~~~r~w~-~y~~~~~~--~f~~~~~~~~ 841 (842)
++|.|||+ |||++|++ +|+.|.++++
T Consensus 249 -~~~~~~~~~~yl~~~~~~~~F~~~~~~v~ 277 (317)
T 1dl5_A 249 -RRLTEIDGTFYYAGPNGVVEFLDDRMRIY 277 (317)
T ss_dssp -SCEEEETTEEEEECSSEEEEEETTEEEEE
T ss_pred -cccCccCceEEEECCCCeEEEeCCcEEEE
Confidence 45568898 89999986 7999988764
No 38
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=99.88 E-value=8.9e-22 Score=214.09 Aligned_cols=345 Identities=10% Similarity=0.136 Sum_probs=214.2
Q ss_pred cEEEECCChHHHHHHHHHHhCCCeEEEEecCCCCCCCceeEe-eCCeee-ecceEeecCCCchhHHHHHHHcCCCccccc
Q 035870 2 RVAVIGAGISGLVSAYVLAKAGVEVVLYEKDDYLGGHAKTVT-FDGVDL-DLGFMVFNRVTYPNMMEFFESLGVDMEMSD 79 (842)
Q Consensus 2 dV~IIGaGiaGLsaA~~L~~~G~~V~VlEa~~~~GG~~~s~~-~~g~~~-d~G~~~~~~~~~~~~~~l~~~lGl~~~~~~ 79 (842)
||+|||||++||+||++|+++|++|+|+|+++++||++++.. ..|+.+ |.|+|++. ..++.+.++++++|.......
T Consensus 31 dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~~~G~~~~~~G~~~~~-~~~~~~~~~~~~~~~~~~~~~ 109 (397)
T 3hdq_A 31 DYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHIGGNAYDCYDDAGVLIHPYGPHIFH-TNSKDVFEYLSRFTEWRPYQH 109 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGCCEECTTSCEECTTSCCCCE-ESCHHHHHHHHTSCCEEECCC
T ss_pred CEEEECccHHHHHHHHHHHHCCCceEEEeccCCCCCccceeeccCCceEeecCCcccC-CChHHHHHHHHHhhhcccccc
Confidence 799999999999999999999999999999999999999987 578875 99999996 367889999999985332111
Q ss_pred ceeeEeccCCCceeeCCCCCCcchhhhhhccCChHHHHHHHHHHhhhHHHHHHHHhhcCCCCCCccccHHHHHHhcCCCH
Q 035870 80 MSFSVSLEKGHGCEWGSRNGLSSLFAQKKNVLNPYFWQMLREIIKFKDDVLGYLEELESNPDIDRSETLGQFVNSRGYSE 159 (842)
Q Consensus 80 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~ 159 (842)
....+.+|+.+.++. ++..+..-....+.+. ... .++... . ....++.|+++|+.+. +++
T Consensus 110 --~~~~~~~g~l~~lP~--~~~~~~~l~~~~~~~~---~~~----------~~l~~~-~-~~~~~~~s~~e~~~~~-~G~ 169 (397)
T 3hdq_A 110 --RVLASVDGQLLPIPI--NLDTVNRLYGLNLTSF---QVE----------EFFASV-A-EKVEQVRTSEDVVVSK-VGR 169 (397)
T ss_dssp --BEEEEETTEEEEESC--CHHHHHHHHTCCCCHH---HHH----------HHHHHH-C-CCCSSCCBHHHHHHHH-HHH
T ss_pred --cceEEECCEEEEcCC--ChHHHHHhhccCCCHH---HHH----------HHHhhc-c-cCCCCCcCHHHHHHHh-cCH
Confidence 122335666666543 1111100000011111 111 111111 1 1123688999999987 788
Q ss_pred HHHHHHHHHhhhcccCCCchhhccCCHHHHHHHHhhcccc-ccCCCCce-EEecCChhHHHHHHHHHhhhcCceEEeCCC
Q 035870 160 LFQKAYLIPICGSIWSCPSEGVTSFSAFSVLSFCRNHHLL-QLFGRPQW-LTVRWRSHSYVNKVRKQLESWGCQIRTSSE 237 (842)
Q Consensus 160 ~~~~~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~gG~~~l~~~L~~~l~~~G~~i~~~~~ 237 (842)
.+.+.++.|++.+.|+.++++++.. .+. -+...... ...-...+ ..++||+.+++++|++.. |++|++|++
T Consensus 170 ~~~e~~~~py~~k~~~~~~~~Lsa~---~~~-Rvp~~~~~d~~yf~~~~qg~P~gGy~~l~e~l~~~~---g~~V~l~~~ 242 (397)
T 3hdq_A 170 DLYNKFFRGYTRKQWGLDPSELDAS---VTA-RVPTRTNRDNRYFADTYQAMPLHGYTRMFQNMLSSP---NIKVMLNTD 242 (397)
T ss_dssp HHHHHHTHHHHHHHHSSCGGGSBTT---TGG-GSCCCSSCCCBSCCCSEEEEETTCHHHHHHHHTCST---TEEEEESCC
T ss_pred HHHHHHHHHHhCchhCCCHHHHHHH---HHH-hcCcccccCccchhhhheeccCCCHHHHHHHHHhcc---CCEEEECCe
Confidence 8999999999999999999999543 111 11100000 00111233 468999999999997644 899999999
Q ss_pred eeEEEeCCCcEEEEeCCCcEEeCCEEEEccChHHHHHhhcCCCChHHHHhccccceeec-eEEEecCCCCcCCCCCCcce
Q 035870 238 VCSVLPADKGCTIVCGDGSREFYNSCVMALHAPDALKILGNQATFDETRILGAFQYVYS-DIFLHRDKRFMPQNPAAWSA 316 (842)
Q Consensus 238 V~~I~~~~~~v~V~~~~G~~~~ad~VV~A~p~~~~~~ll~~~~~~~~~~~l~~~~~~~~-~v~l~~~~~~~p~~~~~~~~ 316 (842)
|+++ +.++.+|+||+|+|.+.+... .+.+++|.+. .+.+.++..-... ..
T Consensus 243 v~~~-------------~~~~~~d~vI~T~P~d~~~~~-----------~~g~L~yrsl~~~~~~~~~~~~~~--~~--- 293 (397)
T 3hdq_A 243 YREI-------------ADFIPFQHMIYTGPVDAFFDF-----------CYGKLPYRSLEFRHETHDTEQLLP--TG--- 293 (397)
T ss_dssp GGGT-------------TTTSCEEEEEECSCHHHHTTT-----------TTCCCCEEEEEEEEEEESSSCSCS--SS---
T ss_pred EEec-------------cccccCCEEEEcCCHHHHHHH-----------hcCCCCCceEEEEEEEeccccCCC--Ce---
Confidence 9833 345679999999998766321 3567889985 4456666543222 12
Q ss_pred eeecccCCCceEEEEEcccccCCCCCCCCeEEecCCCCCCccee-EEEEc-----CCCCCCHHHHHHHHhhhh-hcCCCC
Q 035870 317 WNFLESFDSKVCLTYWLNVLQNLGETSLPFLVTLNPDHVPEHTL-LKWST-----GHPVPSVAASKASLELDH-IQGKRG 389 (842)
Q Consensus 317 ~~~~~~~~~~~~v~~~~~~l~~l~~~~~~~~~~l~~~~~~~~~~-~~w~~-----~~p~~~~~~~~~~~~~~~-~~~~~~ 389 (842)
|.+...++.-..++.+-+- .... .+..++ ...+. .+|.++........+..+ ....+|
T Consensus 294 ~vn~~d~~p~tRi~e~k~~-~~~~--------------~~~t~i~~Ey~~~~~~pyYpv~~~~~~~~~~~y~~~a~~~~~ 358 (397)
T 3hdq_A 294 TVNYPNDYAYTRVSEFKHI-TGQR--------------HHQTSVVYEYPRAEGDPYYPVPRPENAELYKKYEALADAAQD 358 (397)
T ss_dssp EEECSSSSSCSEEEEHHHH-HCCC--------------CSSEEEEEEEEESSSSCCEECCSHHHHHHHHHHHHHHHHCTT
T ss_pred EEEeCCCCcceEEEeeccc-CCCC--------------CCCEEEEEEECCCCCccccccCchhHHHHHHHHHHHHhcCCC
Confidence 2332221222222222111 0000 011111 11111 356666555444433333 234579
Q ss_pred eEEecc---ccCCCCCchhHhHHHHHHHHhcCC
Q 035870 390 IWFCGA---YQGYGFHEDGLKAGMTAAHGVLGK 419 (842)
Q Consensus 390 l~~aG~---~~g~G~~e~A~~SG~~aA~~Il~~ 419 (842)
|+|+|. |....+ +.++.+|..+|+.++..
T Consensus 359 v~~~GRlg~y~Y~~m-d~~i~~al~~~~~~~~~ 390 (397)
T 3hdq_A 359 VTFVGRLATYRYYNM-DQVVAQALATFRRLQGQ 390 (397)
T ss_dssp EEECSTTTTTCCCCH-HHHHHHHHHHHHHHHC-
T ss_pred EEEcccceEEEeccH-HHHHHHHHHHHHHHhcc
Confidence 999999 445555 89999999999999864
No 39
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=99.87 E-value=2.7e-20 Score=209.32 Aligned_cols=255 Identities=14% Similarity=0.155 Sum_probs=151.6
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCeEEEEecCCCCCCCceeEeeCC-ee---------------eecceEeecC------
Q 035870 1 MRVAVIGAGISGLVSAYVLAKAGVEVVLYEKDDYLGGHAKTVTFDG-VD---------------LDLGFMVFNR------ 58 (842)
Q Consensus 1 kdV~IIGaGiaGLsaA~~L~~~G~~V~VlEa~~~~GG~~~s~~~~g-~~---------------~d~G~~~~~~------ 58 (842)
+||||||||++||+||+.|+++|++|+|||+++++||+++|.+.+| +. ++.|.++...
T Consensus 12 ~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~~t~~~~g~~~~~d~~~~~~~~~~~~~~~g~~~~~~l~P~~l 91 (453)
T 2bcg_G 12 YDVIVLGTGITECILSGLLSVDGKKVLHIDKQDHYGGEAASVTLSQLYEKFKQNPISKEERESKFGKDRDWNVDLIPKFL 91 (453)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEECHHHHHHHHCSSCCCHHHHHHHHCCGGGCCEESSCCBE
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCCCCCccccceeccchhceeccCCccccCcchhcccccceeecccccee
Confidence 4899999999999999999999999999999999999999987655 22 3344333211
Q ss_pred CCchhHHHHHHHcCCCcccc--cceeeEeccCCCceeeCCCCCCcchhhhhhccCChHHHHHHHHHHhhhHHHHHHHHh-
Q 035870 59 VTYPNMMEFFESLGVDMEMS--DMSFSVSLEKGHGCEWGSRNGLSSLFAQKKNVLNPYFWQMLREIIKFKDDVLGYLEE- 135 (842)
Q Consensus 59 ~~~~~~~~l~~~lGl~~~~~--~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 135 (842)
...+.+.++++++|+..... .....+.+.+|+.+..+. .....+ ........ ....+.++..........
T Consensus 92 ~~~~~l~~ll~~lg~~~~l~~~~~~~~~~~~~g~~~~~p~--~~~~~~--~~~l~~~~---~~~~~~~~~~~~~~~~~~~ 164 (453)
T 2bcg_G 92 MANGELTNILIHTDVTRYVDFKQVSGSYVFKQGKIYKVPA--NEIEAI--SSPLMGIF---EKRRMKKFLEWISSYKEDD 164 (453)
T ss_dssp ETTSHHHHHHHHHTGGGTCCEEECCCEEEEETTEEEECCS--SHHHHH--HCTTSCHH---HHHHHHHHHHHHHHCBTTB
T ss_pred ecCcHHHHHHHhcCCccceEEEEccceeEEeCCeEEECCC--ChHHHH--hhhccchh---hHHHHHHHHHHHHHhccCC
Confidence 13457789999999864321 111122234554443322 100000 01111111 111122222111111000
Q ss_pred hcCCCC-CCccccHHHHHHhcCCCHHHHHHHHHHhhhcccCCCchhhccCCHHHH----HHHHhhccccccCCCCceEEe
Q 035870 136 LESNPD-IDRSETLGQFVNSRGYSELFQKAYLIPICGSIWSCPSEGVTSFSAFSV----LSFCRNHHLLQLFGRPQWLTV 210 (842)
Q Consensus 136 ~~~~~~-~~~~~s~~~~l~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 210 (842)
+..... ..+..|+.+|+++.+.++.+.+.+...+. .... ......|.... ..+.... ..+..+.|.++
T Consensus 165 p~~~~~~~~~~~s~~~~l~~~~~~~~l~~~l~~~~~--l~~~--~~~~~~p~~~~~~~~~~~~~s~---~~~~~~~~~~p 237 (453)
T 2bcg_G 165 LSTHQGLDLDKNTMDEVYYKFGLGNSTKEFIGHAMA--LWTN--DDYLQQPARPSFERILLYCQSV---ARYGKSPYLYP 237 (453)
T ss_dssp GGGSTTCCTTTSBHHHHHHHTTCCHHHHHHHHHHTS--CCSS--SGGGGSBHHHHHHHHHHHHHHH---HHHSSCSEEEE
T ss_pred chhhhccccccCCHHHHHHHhCCCHHHHHHHHHHHH--hccC--ccccCCchHHHHHHHHHHHHHH---HhhcCCceEee
Confidence 000000 12578999999998888776553322221 1111 01111122211 1222110 01123567789
Q ss_pred cCChhHHHHHHHHHhhhcCceEEeCCCeeEEEeC--CCcE-EEEeCCCcEEeCCEEEEccChH
Q 035870 211 RWRSHSYVNKVRKQLESWGCQIRTSSEVCSVLPA--DKGC-TIVCGDGSREFYNSCVMALHAP 270 (842)
Q Consensus 211 ~gG~~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~--~~~v-~V~~~~G~~~~ad~VV~A~p~~ 270 (842)
+||++.++++|++.+++.|++|+++++|++|..+ ++++ .|++ +|+++.||+||+|++++
T Consensus 238 ~gG~~~l~~al~~~~~~~G~~i~~~~~V~~i~~~~~~~~~~~V~~-~g~~~~ad~VV~a~~~~ 299 (453)
T 2bcg_G 238 MYGLGELPQGFARLSAIYGGTYMLDTPIDEVLYKKDTGKFEGVKT-KLGTFKAPLVIADPTYF 299 (453)
T ss_dssp TTCTTHHHHHHHHHHHHTTCEEECSCCCCEEEEETTTTEEEEEEE-TTEEEECSCEEECGGGC
T ss_pred CCCHHHHHHHHHHHHHHcCCEEECCCEEEEEEEECCCCeEEEEEE-CCeEEECCEEEECCCcc
Confidence 9999999999999999999999999999999987 6665 5666 57789999999999876
No 40
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.86 E-value=3.9e-21 Score=208.14 Aligned_cols=300 Identities=16% Similarity=0.192 Sum_probs=190.8
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCeEEEEecCCCCCCCceeEeeCCeeeecceEeecCCCchhHHHHHHHcCCCcccccc
Q 035870 1 MRVAVIGAGISGLVSAYVLAKAGVEVVLYEKDDYLGGHAKTVTFDGVDLDLGFMVFNRVTYPNMMEFFESLGVDMEMSDM 80 (842)
Q Consensus 1 kdV~IIGaGiaGLsaA~~L~~~G~~V~VlEa~~~~GG~~~s~~~~g~~~d~G~~~~~~~~~~~~~~l~~~lGl~~~~~~~ 80 (842)
+||+|||||++||++|+.|++.|++|+|||+++.+||++.+....+..++.|..++.. ..+.+.++++++........
T Consensus 3 ~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~~~gg~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~- 80 (336)
T 1yvv_A 3 VPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKRSDAGALDMGAQYFTA-RDRRFATAVKQWQAQGHVAE- 80 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEEETTEEEECSCCCBCC-CSHHHHHHHHHHHHHTSEEE-
T ss_pred ceEEEECCcHHHHHHHHHHHHCCCcEEEEECCCCCcccceeEecCCCeEecCCCeEec-CCHHHHHHHHHHHhCCCeee-
Confidence 4899999999999999999999999999999999999999999999999999888843 44555566554321100000
Q ss_pred eeeEeccCCCceeeCCCCCCcchhhhhhccCChHHHHHHHHHHhhhHHHHHHHHhhcCCCCCCccccHHHHHHhcCCCHH
Q 035870 81 SFSVSLEKGHGCEWGSRNGLSSLFAQKKNVLNPYFWQMLREIIKFKDDVLGYLEELESNPDIDRSETLGQFVNSRGYSEL 160 (842)
Q Consensus 81 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~ 160 (842)
..+....... . . +.
T Consensus 81 ------~~~~~~~~~~------------------------------------------------~---------~-~~-- 94 (336)
T 1yvv_A 81 ------WTPLLYNFHA------------------------------------------------G---------R-LS-- 94 (336)
T ss_dssp ------ECCCEEEESS------------------------------------------------S---------B-CC--
T ss_pred ------ccccceeccC------------------------------------------------c---------c-cc--
Confidence 0000000000 0 0 00
Q ss_pred HHHHHHHHhhhcccCCCchhhccCCHHHHHHHHhhccccccCCCCceEEecCChhHHHHHHHHHhhhcCceEEeCCCeeE
Q 035870 161 FQKAYLIPICGSIWSCPSEGVTSFSAFSVLSFCRNHHLLQLFGRPQWLTVRWRSHSYVNKVRKQLESWGCQIRTSSEVCS 240 (842)
Q Consensus 161 ~~~~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG~~~l~~~L~~~l~~~G~~i~~~~~V~~ 240 (842)
........+....|+..+.+.|++ |++|+++++|++
T Consensus 95 ---------------------------------------~~~~~~~~~~~~~~~~~l~~~l~~-----g~~i~~~~~v~~ 130 (336)
T 1yvv_A 95 ---------------------------------------PSPDEQVRWVGKPGMSAITRAMRG-----DMPVSFSCRITE 130 (336)
T ss_dssp ---------------------------------------CCCTTSCEEEESSCTHHHHHHHHT-----TCCEECSCCEEE
T ss_pred ---------------------------------------cCCCCCccEEcCccHHHHHHHHHc-----cCcEEecCEEEE
Confidence 000012234456678888888776 779999999999
Q ss_pred EEeCCCcEEEEeCCCcEEe-CCEEEEccChHHHHHhhcCCCChHHHHhccccceee-ceEEEecCCCCcCCCCCC-----
Q 035870 241 VLPADKGCTIVCGDGSREF-YNSCVMALHAPDALKILGNQATFDETRILGAFQYVY-SDIFLHRDKRFMPQNPAA----- 313 (842)
Q Consensus 241 I~~~~~~v~V~~~~G~~~~-ad~VV~A~p~~~~~~ll~~~~~~~~~~~l~~~~~~~-~~v~l~~~~~~~p~~~~~----- 313 (842)
|+.++++|.|++.+|+... ||.||+|+|+..+.+++.. .+.....+..+.|.+ .++.+.++.+.+......
T Consensus 131 i~~~~~~~~v~~~~g~~~~~a~~vV~a~g~~~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (336)
T 1yvv_A 131 VFRGEEHWNLLDAEGQNHGPFSHVIIATPAPQASTLLAA--APKLASVVAGVKMDPTWAVALAFETPLQTPMQGCFVQDS 208 (336)
T ss_dssp EEECSSCEEEEETTSCEEEEESEEEECSCHHHHGGGGTT--CHHHHHHHTTCCEEEEEEEEEEESSCCSCCCCEEEECSS
T ss_pred EEEeCCEEEEEeCCCcCccccCEEEEcCCHHHHHHhhcc--CHHHHHHHhhcCccceeEEEEEecCCCCCCCCeEEeCCC
Confidence 9999999999999998664 9999999999999888764 355667788899998 467788877654321110
Q ss_pred cceeeeccc--C--CCc-eEEEEEcc-----cccCCCC-----CCCCeEEe-cCCCC-CCcc-eeEEEEcCCCCCCHHHH
Q 035870 314 WSAWNFLES--F--DSK-VCLTYWLN-----VLQNLGE-----TSLPFLVT-LNPDH-VPEH-TLLKWSTGHPVPSVAAS 375 (842)
Q Consensus 314 ~~~~~~~~~--~--~~~-~~v~~~~~-----~l~~l~~-----~~~~~~~~-l~~~~-~~~~-~~~~w~~~~p~~~~~~~ 375 (842)
...|.+... | .+. ..+..... .+..+.+ .+.+.+.. ++... .|.. ...+|.++.|.+..++.
T Consensus 209 ~~~~l~~~~~~p~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~~~~~p~~~~~~rw~~a~~~~~~~~~ 288 (336)
T 1yvv_A 209 PLDWLARNRSKPERDDTLDTWILHATSQWSRQNLDASREQVIEHLHGAFAELIDCTMPAPVFSLAHRWLYARPAGAHEWG 288 (336)
T ss_dssp SEEEEEEGGGSTTCCCSSEEEEEEECHHHHHHTTTSCHHHHHHHHHHHHHTTCSSCCCCCSEEEEEEEEEEEESSCCCCS
T ss_pred ceeEEEecCcCCCCCCCCcEEEEEeCHHHHHHHHhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEccccCccCCCCCCCCC
Confidence 012332211 1 111 22222221 1111111 01111222 22221 1222 56699988777654321
Q ss_pred HHHHhhhhhcCCCCeEEeccccCCCCCchhHhHHHHHHHHhcCCc
Q 035870 376 KASLELDHIQGKRGIWFCGAYQGYGFHEDGLKAGMTAAHGVLGKS 420 (842)
Q Consensus 376 ~~~~~~~~~~~~~~l~~aG~~~g~G~~e~A~~SG~~aA~~Il~~~ 420 (842)
......++|++||||+..+.+++|+.||.++|+.|....
T Consensus 289 ------~~~~~~~rl~laGDa~~g~gv~~a~~sg~~lA~~l~~~~ 327 (336)
T 1yvv_A 289 ------ALSDADLGIYVCGDWCLSGRVEGAWLSGQEAARRLLEHL 327 (336)
T ss_dssp ------CEEETTTTEEECCGGGTTSSHHHHHHHHHHHHHHHHHHT
T ss_pred ------eeecCCCCEEEEecCCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 012345899999997743334999999999999997643
No 41
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.85 E-value=1.5e-21 Score=200.44 Aligned_cols=171 Identities=18% Similarity=0.232 Sum_probs=144.1
Q ss_pred CCCCCeEEEeccCchHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCC--c-cCCCccEEEEc
Q 035870 627 VSKGQEVLEIGCGWGTLAIEIVKRTGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQL--A-KANKYDRIISC 703 (842)
Q Consensus 627 ~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~--~-~~~~fD~i~s~ 703 (842)
++++.+|||||||+|.++..+++. +++|+|+|+|+++++.++++ ++++++|+.+. + ++++||+|+|+
T Consensus 39 ~~~~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~---------~~~~~~d~~~~~~~~~~~~fD~i~~~ 108 (240)
T 3dli_A 39 FKGCRRVLDIGCGRGEFLELCKEE-GIESIGVDINEDMIKFCEGK---------FNVVKSDAIEYLKSLPDKYLDGVMIS 108 (240)
T ss_dssp TTTCSCEEEETCTTTHHHHHHHHH-TCCEEEECSCHHHHHHHHTT---------SEEECSCHHHHHHTSCTTCBSEEEEE
T ss_pred hcCCCeEEEEeCCCCHHHHHHHhC-CCcEEEEECCHHHHHHHHhh---------cceeeccHHHHhhhcCCCCeeEEEEC
Confidence 467899999999999999999997 88999999999999999865 68899998775 3 56899999999
Q ss_pred chhhhcChhhHHHHHHHHHhccccCcEEEEEeecCCCcccccccCccchhhhcccCCC-CCCCHHHHHHHHhhcCCcEEE
Q 035870 704 EMIEAVGHEFMEEFFGCCESLLAEDGLLVLQFISIPDERYNEYRLSSDFIKEYIFPGG-CLPSLSRITSAMSVASRLCVE 782 (842)
Q Consensus 704 ~~~~~~~~~~~~~~~~~~~~~LkpgG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~-~~~~~~~~~~~~~~~~gf~v~ 782 (842)
.+++|++++++..++++++++|||||++++..+..... ..+...|+.|.. ..++..++.+.+.+ +||+++
T Consensus 109 ~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~l~~~l~~-aGf~~~ 179 (240)
T 3dli_A 109 HFVEHLDPERLFELLSLCYSKMKYSSYIVIESPNPTSL--------YSLINFYIDPTHKKPVHPETLKFILEY-LGFRDV 179 (240)
T ss_dssp SCGGGSCGGGHHHHHHHHHHHBCTTCCEEEEEECTTSH--------HHHHHHTTSTTCCSCCCHHHHHHHHHH-HTCEEE
T ss_pred CchhhCCcHHHHHHHHHHHHHcCCCcEEEEEeCCcchh--------HHHHHHhcCccccccCCHHHHHHHHHH-CCCeEE
Confidence 99999998778999999999999999999987753321 123344555543 45788888888777 899999
Q ss_pred EEEecC----------ccHHHHHHHHHHH-HHHhHHHHHhccCCHH
Q 035870 783 QVENIG----------IHYYQTLRCWRKN-FMEKQSKILALGFNDK 817 (842)
Q Consensus 783 ~~~~~~----------~~y~~tl~~w~~~-~~~~~~~~~~~g~~~~ 817 (842)
.+..+. .+ +.++..|+++ |.++++.+..++|+++
T Consensus 180 ~~~~~~~~~~~~~l~~~~-~~~l~~w~~~~~~~~~~~~~~~~f~~~ 224 (240)
T 3dli_A 180 KIEFFEECEELTKLAKID-SNTVSEEVIRVINENIEKLNRILFGPQ 224 (240)
T ss_dssp EEEEECCCCTTTSCCCCC-CSSSCHHHHHHHHHHHHHHHHHHSCCS
T ss_pred EEEEeccCcccccccccc-cccccHHHHHhhhhhHHHHHhhccCcc
Confidence 998887 66 7899999999 9999999999888754
No 42
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.82 E-value=6.7e-20 Score=193.33 Aligned_cols=203 Identities=16% Similarity=0.184 Sum_probs=149.7
Q ss_pred HHHHHHHHHcCCCCCCeEEEeccCchHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCc--c
Q 035870 616 RKVSLLIEKARVSKGQEVLEIGCGWGTLAIEIVKRTGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLA--K 693 (842)
Q Consensus 616 ~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~--~ 693 (842)
+.+..+++.+..+ +.+|||||||+|.++..+++. +.+|+|+|+|+++++.|++++...+++++++++++|+.+++ .
T Consensus 56 ~~l~~~l~~~~~~-~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~ 133 (285)
T 4htf_A 56 QDLDRVLAEMGPQ-KLRVLDAGGGEGQTAIKMAER-GHQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASHL 133 (285)
T ss_dssp HHHHHHHHHTCSS-CCEEEEETCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGGC
T ss_pred HHHHHHHHhcCCC-CCEEEEeCCcchHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhhc
Confidence 3456677776644 679999999999999999998 88999999999999999999999888779999999999987 6
Q ss_pred CCCccEEEEcchhhhcChhhHHHHHHHHHhccccCcEEEEEeecCCCccccccc-Cccchhhhcc-------cCCCCCCC
Q 035870 694 ANKYDRIISCEMIEAVGHEFMEEFFGCCESLLAEDGLLVLQFISIPDERYNEYR-LSSDFIKEYI-------FPGGCLPS 765 (842)
Q Consensus 694 ~~~fD~i~s~~~~~~~~~~~~~~~~~~~~~~LkpgG~~~~~~~~~~~~~~~~~~-~~~~~~~~~i-------~p~~~~~~ 765 (842)
+++||+|++..+++|+++ +..+++++.++|||||++++..+........... .....+.... .......+
T Consensus 134 ~~~fD~v~~~~~l~~~~~--~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (285)
T 4htf_A 134 ETPVDLILFHAVLEWVAD--PRSVLQTLWSVLRPGGVLSLMFYNAHGLLMHNMVAGNFDYVQAGMPKKKKRTLSPDYPRD 211 (285)
T ss_dssp SSCEEEEEEESCGGGCSC--HHHHHHHHHHTEEEEEEEEEEEEBHHHHHHHHHHTTCHHHHHTTCCCC----CCCSCCBC
T ss_pred CCCceEEEECchhhcccC--HHHHHHHHHHHcCCCeEEEEEEeCCchHHHHHHHhcCHHHHhhhccccccccCCCCCCCC
Confidence 789999999999999976 7899999999999999999987754322111100 0001111111 11234568
Q ss_pred HHHHHHHHhhcCCcEEEEEEecCccHHHHHHHHHHHHHHhHHHHHhccCCHHHHHHHHHHHHHHHHhcccCc
Q 035870 766 LSRITSAMSVASRLCVEQVENIGIHYYQTLRCWRKNFMEKQSKILALGFNDKFIRTWEYYFDYCAAGFKSYT 837 (842)
Q Consensus 766 ~~~~~~~~~~~~gf~v~~~~~~~~~y~~tl~~w~~~~~~~~~~~~~~g~~~~~~r~w~~y~~~~~~~f~~~~ 837 (842)
..++.+.+++ +||++++.+.++..+.. |...+ ... +.+.+++.+.+.+|+..+-.+.
T Consensus 212 ~~~l~~~l~~-aGf~v~~~~~~~~~~~~----~~~~~--------~~~--~~~~~l~~~e~~~~~~~~~~~~ 268 (285)
T 4htf_A 212 PTQVYLWLEE-AGWQIMGKTGVRVFHDY----LREKH--------QQR--DCYEALLELETRYCRQEPYITL 268 (285)
T ss_dssp HHHHHHHHHH-TTCEEEEEEEESSSGGG----CSSTT--------HHH--HTHHHHHHHHHHHTTSTTGGGG
T ss_pred HHHHHHHHHH-CCCceeeeeeEEEeeec----ccccc--------cCc--ccHHHHHHHHHHhcCCChHHHH
Confidence 8999888887 89999999887643211 10000 000 1267889999999988766544
No 43
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=99.80 E-value=1.3e-18 Score=194.34 Aligned_cols=257 Identities=11% Similarity=0.102 Sum_probs=160.0
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCeEEEEecCCCCCCCceeEe-e--------------------CCeeeecceEeecCC
Q 035870 1 MRVAVIGAGISGLVSAYVLAKAGVEVVLYEKDDYLGGHAKTVT-F--------------------DGVDLDLGFMVFNRV 59 (842)
Q Consensus 1 kdV~IIGaGiaGLsaA~~L~~~G~~V~VlEa~~~~GG~~~s~~-~--------------------~g~~~d~G~~~~~~~ 59 (842)
+||+|||||++||+||+.|+++|++|+|+|+++++||+++|.+ . .++.+|.|++++..
T Consensus 7 ~~v~iiG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~~~s~~~~~~g~~~~~~~~~~~~~~~~g~~~~~d~gP~~l~~- 85 (433)
T 1d5t_A 7 YDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSITPLEELYKRFQLLEGPPETMGRGRDWNVDLIPKFLMA- 85 (433)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTSCEECSHHHHHHHTTCTTCCCGGGCCGGGCCEESSCCBEET-
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCccccccccccHHHHHhhccCCCCChhHhcccCceEEccCcceeec-
Confidence 4899999999999999999999999999999999999999988 1 34778899888743
Q ss_pred CchhHHHHHHHcCCCccc--ccceeeEeccCCCceeeCCCCCCcchhhhhhccCChHHHHHHHHHHhhhHHHHHHHHh-h
Q 035870 60 TYPNMMEFFESLGVDMEM--SDMSFSVSLEKGHGCEWGSRNGLSSLFAQKKNVLNPYFWQMLREIIKFKDDVLGYLEE-L 136 (842)
Q Consensus 60 ~~~~~~~l~~~lGl~~~~--~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 136 (842)
...+.++++++|+.... ......+.+.+|+.+..+. .....+ ...+.... ....+.++......+... +
T Consensus 86 -~~~l~~ll~~lgl~~~l~~~~~~~~~~~~~g~~~~~p~--~~~~~~--~~~l~~~~---~~~~~~~~~~~~~~~~~~~p 157 (433)
T 1d5t_A 86 -NGQLVKMLLYTEVTRYLDFKVVEGSFVYKGGKIYKVPS--TETEAL--ASNLMGMF---EKRRFRKFLVFVANFDENDP 157 (433)
T ss_dssp -TSHHHHHHHHHTGGGGCCEEECCEEEEEETTEEEECCC--SHHHHH--HCSSSCHH---HHHHHHHHHHHHHHCCTTCG
T ss_pred -cchHHHHHHHcCCccceEEEEeCceEEeeCCEEEECCC--CHHHHh--hCcccChh---hHHHHHHHHHHHHhhcccCc
Confidence 34677999999986432 1122222344555443322 100000 01111110 111122222111111000 0
Q ss_pred c-CCCCCCccccHHHHHHhcCCCHHHHHHHHHHhhhcccCCCchhhccCCH-HHHHHHHhhccccccCCCCceEEecCCh
Q 035870 137 E-SNPDIDRSETLGQFVNSRGYSELFQKAYLIPICGSIWSCPSEGVTSFSA-FSVLSFCRNHHLLQLFGRPQWLTVRWRS 214 (842)
Q Consensus 137 ~-~~~~~~~~~s~~~~l~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~gG~ 214 (842)
. ......+..|+.+|+++.+.++.+.+.+..+ +....+.++.+.+.... ..+..+... ...++...+++++||+
T Consensus 158 ~~~~~~~~~~~s~~~~l~~~~~~~~l~~~l~~~-~~~~~~~~~~~~p~~~~~~~~~~~~~s---~~~~g~~~~~~p~gG~ 233 (433)
T 1d5t_A 158 KTFEGVDPQNTSMRDVYRKFDLGQDVIDFTGHA-LALYRTDDYLDQPCLETINRIKLYSES---LARYGKSPYLYPLYGL 233 (433)
T ss_dssp GGGTTCCTTTSBHHHHHHHTTCCHHHHHHHHHH-TSCCSSSGGGGSBSHHHHHHHHHHHHS---CCSSSCCSEEEETTCT
T ss_pred hhccccccccCCHHHHHHHcCCCHHHHHHHHHH-HHhccCCCccCCCHHHHHHHHHHHHHH---HHhcCCCcEEEeCcCH
Confidence 0 0000125789999999988887765543322 12222222323221111 112222221 1112345688999999
Q ss_pred hHHHHHHHHHhhhcCceEEeCCCeeEEEeCCCcEEEEeCCCcEEeCCEEEEccChH
Q 035870 215 HSYVNKVRKQLESWGCQIRTSSEVCSVLPADKGCTIVCGDGSREFYNSCVMALHAP 270 (842)
Q Consensus 215 ~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VV~A~p~~ 270 (842)
+.++++|++.+++.|++|+++++|++|..+++++.+...+|+++.||+||+|++++
T Consensus 234 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~v~~v~~~g~~~~ad~VV~a~~~~ 289 (433)
T 1d5t_A 234 GELPQGFARLSAIYGGTYMLNKPVDDIIMENGKVVGVKSEGEVARCKQLICDPSYV 289 (433)
T ss_dssp THHHHHHHHHHHHHTCCCBCSCCCCEEEEETTEEEEEEETTEEEECSEEEECGGGC
T ss_pred HHHHHHHHHHHHHcCCEEECCCEEEEEEEeCCEEEEEEECCeEEECCEEEECCCCC
Confidence 99999999999999999999999999999888876444578889999999999876
No 44
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.80 E-value=3.9e-19 Score=183.27 Aligned_cols=113 Identities=16% Similarity=0.222 Sum_probs=103.8
Q ss_pred CCCCCeEEEeccCchHHHHHHHHh---cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCccCCCccEEEEc
Q 035870 627 VSKGQEVLEIGCGWGTLAIEIVKR---TGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLAKANKYDRIISC 703 (842)
Q Consensus 627 ~~~~~~vLDiGcG~G~~~~~la~~---~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~~~fD~i~s~ 703 (842)
++|+.+|||||||+|.++..+++. ++++|+|+|+|++|++.|+++++..+...+|+++++|+.+++. ++||+|+++
T Consensus 68 ~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~~-~~~d~v~~~ 146 (261)
T 4gek_A 68 VQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIAI-ENASMVVLN 146 (261)
T ss_dssp CCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCCC-CSEEEEEEE
T ss_pred CCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeecccccccc-cccccceee
Confidence 689999999999999999999986 4789999999999999999999998888899999999999874 469999999
Q ss_pred chhhhcChhhHHHHHHHHHhccccCcEEEEEeecCCC
Q 035870 704 EMIEAVGHEFMEEFFGCCESLLAEDGLLVLQFISIPD 740 (842)
Q Consensus 704 ~~~~~~~~~~~~~~~~~~~~~LkpgG~~~~~~~~~~~ 740 (842)
.+++|+++++...++++++++|||||++++.+...+.
T Consensus 147 ~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e~~~~~ 183 (261)
T 4gek_A 147 FTLQFLEPSERQALLDKIYQGLNPGGALVLSEKFSFE 183 (261)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBCCS
T ss_pred eeeeecCchhHhHHHHHHHHHcCCCcEEEEEeccCCC
Confidence 9999999877889999999999999999998876654
No 45
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=99.80 E-value=6.8e-19 Score=194.93 Aligned_cols=255 Identities=11% Similarity=0.125 Sum_probs=162.8
Q ss_pred cEEEECCChHHHHHHHHHHhCCCeEEEEecCCCCCCCceeEeeC--------------------CeeeecceEeecCCCc
Q 035870 2 RVAVIGAGISGLVSAYVLAKAGVEVVLYEKDDYLGGHAKTVTFD--------------------GVDLDLGFMVFNRVTY 61 (842)
Q Consensus 2 dV~IIGaGiaGLsaA~~L~~~G~~V~VlEa~~~~GG~~~s~~~~--------------------g~~~d~G~~~~~~~~~ 61 (842)
||+|||||++|+++|+.|++.|++|+|+|+++++||++++.+.+ ++.+|++++++. ..
T Consensus 22 dv~iiG~G~~g~~~a~~l~~~g~~v~~~e~~~~~Gg~~~s~~~~~l~~~~~~g~~~~~~~g~~R~y~iDL~P~~l~--~~ 99 (475)
T 3p1w_A 22 DVIILGTGLKECILSGLLSHYGKKILVLDRNPYYGGETASLNLTNLYNTFKPKENIPSKYGENRHWNVDLIPKFIL--VG 99 (475)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEECHHHHHHHHCTTSCCCGGGCCGGGCCEESSCCBEE--TT
T ss_pred CEEEECCCHHHHHHHHHHHHCCCcEEEEeccCCCCCCccccchhhhhhhcccCCCcccccccccceEEeecCeEee--cC
Confidence 89999999999999999999999999999999999999998642 468899988884 56
Q ss_pred hhHHHHHHHcCCCcccccc----eeeEecc-------CCCceeeCCCCCCcchhhhhhccCChHHHHHHHHHHhhhHHHH
Q 035870 62 PNMMEFFESLGVDMEMSDM----SFSVSLE-------KGHGCEWGSRNGLSSLFAQKKNVLNPYFWQMLREIIKFKDDVL 130 (842)
Q Consensus 62 ~~~~~l~~~lGl~~~~~~~----~~~~~~~-------~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (842)
..+.+++.+.|+....... .+.+... +++.+..+ .+....+. ...++.. ....+.++.....
T Consensus 100 g~L~~lL~~~gv~~ylef~~~~~~y~~~~~~~~~~~~~g~~~~VP--ss~~e~~~--~~lLs~~---eK~~l~kFL~~l~ 172 (475)
T 3p1w_A 100 GNLVKILKKTRVTNYLEWLVVEGSYVYQHQKKGFLTSEKFIHKVP--ATDMEALV--SPLLSLM---EKNRCKNFYQYVS 172 (475)
T ss_dssp SHHHHHHHHTTCGGGSCEEECSEEEEEEEECCCSSSCCEEEEECC--CSHHHHHT--CTTSCHH---HHHHHHHHHHHHH
T ss_pred cHHHHHHHHCCchheeEEEecCcceEEecCccccccCCCceEeCC--CCHHHHhh--ccCCCHH---HHHHHHHHHHHHH
Confidence 6888999999987665322 1211111 22333222 22222232 1233322 2222333332222
Q ss_pred HHHHh-hcCCCCC-CccccHHHHHHhcCCCHHHHHHHHHHhhhcccCCCchhhccCCHHHHHHHHhhcc-ccccCCCCce
Q 035870 131 GYLEE-LESNPDI-DRSETLGQFVNSRGYSELFQKAYLIPICGSIWSCPSEGVTSFSAFSVLSFCRNHH-LLQLFGRPQW 207 (842)
Q Consensus 131 ~~~~~-~~~~~~~-~~~~s~~~~l~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~ 207 (842)
.+... ....... .+..++.+|+++.++++.+.+.+..++.... ..+..+ .++...+..+.... ....++...+
T Consensus 173 ~~~~~~~~~~~~~~l~~~s~~e~l~~~gls~~l~~fl~~alaL~~-~~~~~~---~~a~~~l~ri~~y~~Sl~~yg~s~~ 248 (475)
T 3p1w_A 173 EWDANKRNTWDNLDPYKLTMLEIYKHFNLCQLTIDFLGHAVALYL-NDDYLK---QPAYLTLERIKLYMQSISAFGKSPF 248 (475)
T ss_dssp HCCTTCGGGSTTCCTTTSBHHHHHHHTTCCHHHHHHHHHHTSCCS-SSGGGG---SBHHHHHHHHHHHHHHHHHHSSCSE
T ss_pred hhhhccchhhhcccccCCCHHHHHHHcCCCHHHHHHHHHHHHhhc-CCCccc---CCHHHHHHHHHHHHHHHhhcCCCce
Confidence 21100 0001111 1468999999999999887765444432211 111222 24433322111100 0111234678
Q ss_pred EEecCChhHHHHHHHHHhhhcCceEEeCCCeeEEEe-CCCc-EEEEeCCCcEEeCCEEEEccCh
Q 035870 208 LTVRWRSHSYVNKVRKQLESWGCQIRTSSEVCSVLP-ADKG-CTIVCGDGSREFYNSCVMALHA 269 (842)
Q Consensus 208 ~~~~gG~~~l~~~L~~~l~~~G~~i~~~~~V~~I~~-~~~~-v~V~~~~G~~~~ad~VV~A~p~ 269 (842)
.+++||++.++++|++.+++.|++|+++++|++|.. ++++ +.|++.+|+++.||+||+++..
T Consensus 249 ~yp~gG~~~L~~aL~r~~~~~Gg~i~l~t~V~~I~~d~~g~v~gV~~~~G~~i~Ad~VI~a~~~ 312 (475)
T 3p1w_A 249 IYPLYGLGGIPEGFSRMCAINGGTFMLNKNVVDFVFDDDNKVCGIKSSDGEIAYCDKVICDPSY 312 (475)
T ss_dssp EEETTCTTHHHHHHHHHHHHC--CEESSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEECGGG
T ss_pred EEECCCHHHHHHHHHHHHHHcCCEEEeCCeEEEEEEecCCeEEEEEECCCcEEECCEEEECCCc
Confidence 899999999999999999999999999999999998 5555 5799999989999999999753
No 46
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.80 E-value=1.5e-18 Score=180.06 Aligned_cols=162 Identities=15% Similarity=0.185 Sum_probs=131.2
Q ss_pred HHHHHHHc-CCCCCCeEEEeccCchHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCc-cCC
Q 035870 618 VSLLIEKA-RVSKGQEVLEIGCGWGTLAIEIVKRTGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLA-KAN 695 (842)
Q Consensus 618 ~~~l~~~l-~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~-~~~ 695 (842)
...+++.+ .++++.+|||||||+|.++..+++..+++|+|+|+|+.+++.|++++...+++++++++++|+.+++ +++
T Consensus 34 ~~~~l~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 113 (257)
T 3f4k_A 34 TRKAVSFINELTDDAKIADIGCGTGGQTLFLADYVKGQITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNLPFQNE 113 (257)
T ss_dssp HHHHHTTSCCCCTTCEEEEETCTTSHHHHHHHHHCCSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCSSCTT
T ss_pred HHHHHHHHhcCCCCCeEEEeCCCCCHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCCCCCC
Confidence 34555665 5678899999999999999999998556999999999999999999999999888999999999988 678
Q ss_pred CccEEEEcchhhhcChhhHHHHHHHHHhccccCcEEEEEeecCCCcccccccCccchhhhcccCCCCCCCHHHHHHHHhh
Q 035870 696 KYDRIISCEMIEAVGHEFMEEFFGCCESLLAEDGLLVLQFISIPDERYNEYRLSSDFIKEYIFPGGCLPSLSRITSAMSV 775 (842)
Q Consensus 696 ~fD~i~s~~~~~~~~~~~~~~~~~~~~~~LkpgG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~ 775 (842)
+||+|+++.+++|++ +..+++++.++|||||++++.++......... ....++.. .+| .+++..++.+.+.+
T Consensus 114 ~fD~v~~~~~l~~~~---~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~--~~~~~~~~-~~~--~~~~~~~~~~~l~~ 185 (257)
T 3f4k_A 114 ELDLIWSEGAIYNIG---FERGMNEWSKYLKKGGFIAVSEASWFTSERPA--EIEDFWMD-AYP--EISVIPTCIDKMER 185 (257)
T ss_dssp CEEEEEEESCSCCCC---HHHHHHHHHTTEEEEEEEEEEEEEESSSCCCH--HHHHHHHH-HCT--TCCBHHHHHHHHHH
T ss_pred CEEEEEecChHhhcC---HHHHHHHHHHHcCCCcEEEEEEeeccCCCChH--HHHHHHHH-hCC--CCCCHHHHHHHHHH
Confidence 999999999999993 68999999999999999999886533221110 11122222 123 36789999988887
Q ss_pred cCCcEEEEEEecC
Q 035870 776 ASRLCVEQVENIG 788 (842)
Q Consensus 776 ~~gf~v~~~~~~~ 788 (842)
+||+++....+.
T Consensus 186 -aGf~~v~~~~~~ 197 (257)
T 3f4k_A 186 -AGYTPTAHFILP 197 (257)
T ss_dssp -TTEEEEEEEECC
T ss_pred -CCCeEEEEEECC
Confidence 899999988776
No 47
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=99.80 E-value=4.7e-19 Score=190.97 Aligned_cols=248 Identities=17% Similarity=0.155 Sum_probs=144.8
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCeEEEEecC-CCCCCCceeEe----------eCCeeeecceEeecCCCchhHHHHHH
Q 035870 1 MRVAVIGAGISGLVSAYVLAKAGVEVVLYEKD-DYLGGHAKTVT----------FDGVDLDLGFMVFNRVTYPNMMEFFE 69 (842)
Q Consensus 1 kdV~IIGaGiaGLsaA~~L~~~G~~V~VlEa~-~~~GG~~~s~~----------~~g~~~d~G~~~~~~~~~~~~~~l~~ 69 (842)
+||+|||||++||+||+.|+++|++|+|||++ +++||++.|.. ..++.+|.|++++. ..++.+.++++
T Consensus 45 ~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~vGGr~~t~~~~~~~~~~~~~~~~~~e~G~~~~~-~~~~~~~~~~~ 123 (376)
T 2e1m_A 45 KRILIVGAGIAGLVAGDLLTRAGHDVTILEANANRVGGRIKTFHAKKGEPSPFADPAQYAEAGAMRLP-SFHPLTLALID 123 (376)
T ss_dssp CEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSCCBTTCCEECCCTTSCCSSSSTTCCEESSCCCEE-TTCHHHHHHHH
T ss_pred ceEEEECCCHHHHHHHHHHHHCCCcEEEEeccccccCCceeeecccccccccccCCCcEEecCceeec-chHHHHHHHHH
Confidence 58999999999999999999999999999999 99999999987 35789999999984 46788889999
Q ss_pred HcCCCccccccee----------------eEeccCC--------------------CceeeCCC-------CCCcchhh-
Q 035870 70 SLGVDMEMSDMSF----------------SVSLEKG--------------------HGCEWGSR-------NGLSSLFA- 105 (842)
Q Consensus 70 ~lGl~~~~~~~~~----------------~~~~~~g--------------------~~~~~~~~-------~~~~~~~~- 105 (842)
++|+......... ...++.. ..+...+. .....++.
T Consensus 124 ~lGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~q~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 203 (376)
T 2e1m_A 124 KLGLKRRLFFNVDIDPQTGNQDAPVPPVFYKSFKDGKTWTNGAPSPEFKEPDKRNHTWIRTNREQVRRAQYATDPSSINE 203 (376)
T ss_dssp HTTCCEEEECSSCCCTTSSBCSSCCCCCEEECSSTTCEEESSCCCTTCBCCCCCCCSEEEETTEEEEHHHHHHCTHHHHH
T ss_pred HcCCCcceeeccccccccccccccccccceeeeccceeEeccCCcccccccccCCCceEEECCceecccccccCHHHhcc
Confidence 9999866532110 0011100 00111000 00000000
Q ss_pred ---hhhc----cCChHHHHHHHHHHhhhHH-----------H---HHHHHhhcCCCCCCccccHHHHHH-hcCCCHHHHH
Q 035870 106 ---QKKN----VLNPYFWQMLREIIKFKDD-----------V---LGYLEELESNPDIDRSETLGQFVN-SRGYSELFQK 163 (842)
Q Consensus 106 ---~~~~----~~~~~~~~~~~~~~~~~~~-----------~---~~~~~~~~~~~~~~~~~s~~~~l~-~~~~~~~~~~ 163 (842)
.... .....+...+..+.+.... . ........ ...+..|+.+|+. ..++++...+
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~lD~~S~~~~L~~~~g~s~~~~~ 280 (376)
T 2e1m_A 204 GFHLTGCETRLTVSDMVNQALEPVRDYYSVKQDDGTRVNKPFKEWLAGWADVV---RDFDGYSMGRFLREYAEFSDEAVE 280 (376)
T ss_dssp HTTCCGGGGGSCHHHHHHHHHHHHHHHHEEEETTTEEEECCHHHHHHHHHHHH---HHHTTCBHHHHHHHTSCCCHHHHH
T ss_pred ccCCchhhcccCHHHHHHHHHHHHHHhhhhccccccccccccchhhccchHHH---HHHhCCCHHHHHhhccCCCHHHHH
Confidence 0000 0001111222222221000 0 00000000 0016889999998 7888887655
Q ss_pred HHHHHhhhcccCCCchhhccCCHHHHHHHHhhccccccCCCCceEEecCChhHHHHHHHHHhhhcCceEEeCCCeeEEEe
Q 035870 164 AYLIPICGSIWSCPSEGVTSFSAFSVLSFCRNHHLLQLFGRPQWLTVRWRSHSYVNKVRKQLESWGCQIRTSSEVCSVLP 243 (842)
Q Consensus 164 ~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG~~~l~~~L~~~l~~~G~~i~~~~~V~~I~~ 243 (842)
.+ ..+. + .......+....+... ........++.+.||+++|+++|++.+ +.+|++|++|++|.+
T Consensus 281 ~~-~~~~----~--~~~~~~~s~l~~l~~~-----~~~~~~~~~~~i~GG~~~l~~~l~~~l---~~~i~l~~~V~~I~~ 345 (376)
T 2e1m_A 281 AI-GTIE----N--MTSRLHLAFFHSFLGR-----SDIDPRATYWEIEGGSRMLPETLAKDL---RDQIVMGQRMVRLEY 345 (376)
T ss_dssp HH-HHHT----T--CTTTTTSBHHHHHHHC-----SCSCTTCCEEEETTCTTHHHHHHHHHG---GGTEECSEEEEEEEE
T ss_pred HH-Hhhc----C--ccccchhhHHHHHHHh-----hhhccCCceEEECCcHHHHHHHHHHhc---CCcEEecCeEEEEEE
Confidence 33 2221 1 1112234555444332 122345789999999999999999999 568999999999999
Q ss_pred CCCcEEEEeCCCcEEeCCEEEEcc
Q 035870 244 ADKGCTIVCGDGSREFYNSCVMAL 267 (842)
Q Consensus 244 ~~~~v~V~~~~G~~~~ad~VV~A~ 267 (842)
+++++.|.+.+.......+|.+.+
T Consensus 346 ~~~gv~v~~~~~~~~~g~~~~~~~ 369 (376)
T 2e1m_A 346 YDPGRDGHHGELTGPGGPAVAIQT 369 (376)
T ss_dssp CCCC-------------CCEEEEE
T ss_pred CCCceEEEeCCCcCCCCCeeEEEe
Confidence 999887766554345566777765
No 48
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.79 E-value=5.7e-18 Score=175.52 Aligned_cols=165 Identities=15% Similarity=0.137 Sum_probs=134.0
Q ss_pred HHHHHHHHHcCCCCCCeEEEeccCchHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCccCC
Q 035870 616 RKVSLLIEKARVSKGQEVLEIGCGWGTLAIEIVKRTGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLAKAN 695 (842)
Q Consensus 616 ~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~~ 695 (842)
..++.+++.+.++++.+|||||||+|.++..+++..+++|+|+|+|+.+++.|+++++..++.++++++++|+.+++.++
T Consensus 23 ~~~~~l~~~~~~~~~~~VLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~ 102 (256)
T 1nkv_A 23 EKYATLGRVLRMKPGTRILDLGSGSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYVANE 102 (256)
T ss_dssp HHHHHHHHHTCCCTTCEEEEETCTTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCCCSS
T ss_pred HHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhCCcCC
Confidence 45567888888999999999999999999999988788999999999999999999999998889999999999887668
Q ss_pred CccEEEEcchhhhcChhhHHHHHHHHHhccccCcEEEEEeecCCCcccccccCccchhhhccc-CCCCCCCHHHHHHHHh
Q 035870 696 KYDRIISCEMIEAVGHEFMEEFFGCCESLLAEDGLLVLQFISIPDERYNEYRLSSDFIKEYIF-PGGCLPSLSRITSAMS 774 (842)
Q Consensus 696 ~fD~i~s~~~~~~~~~~~~~~~~~~~~~~LkpgG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-p~~~~~~~~~~~~~~~ 774 (842)
+||+|++..+++|+++ +..++++++++|||||++++.+........ ...+...+.. ....+++..++.+.+.
T Consensus 103 ~fD~V~~~~~~~~~~~--~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~l~ 175 (256)
T 1nkv_A 103 KCDVAACVGATWIAGG--FAGAEELLAQSLKPGGIMLIGEPYWRQLPA-----TEEIAQACGVSSTSDFLTLPGLVGAFD 175 (256)
T ss_dssp CEEEEEEESCGGGTSS--SHHHHHHHTTSEEEEEEEEEEEEEETTCCS-----SHHHHHTTTCSCGGGSCCHHHHHHHHH
T ss_pred CCCEEEECCChHhcCC--HHHHHHHHHHHcCCCeEEEEecCcccCCCC-----hHHHHHHHhcccccccCCHHHHHHHHH
Confidence 9999999999999976 799999999999999999998765432211 0111111111 1125678899988888
Q ss_pred hcCCcEEEEEEecC
Q 035870 775 VASRLCVEQVENIG 788 (842)
Q Consensus 775 ~~~gf~v~~~~~~~ 788 (842)
+ +||+++.+....
T Consensus 176 ~-aGf~~~~~~~~~ 188 (256)
T 1nkv_A 176 D-LGYDVVEMVLAD 188 (256)
T ss_dssp T-TTBCCCEEEECC
T ss_pred H-CCCeeEEEEeCC
Confidence 6 899987776543
No 49
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.79 E-value=6.3e-19 Score=183.17 Aligned_cols=183 Identities=16% Similarity=0.170 Sum_probs=138.6
Q ss_pred HHHHHHHHHHHHHHcCCCCCCeEEEeccCchHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccC
Q 035870 611 KAAQMRKVSLLIEKARVSKGQEVLEIGCGWGTLAIEIVKRTGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQ 690 (842)
Q Consensus 611 ~~aq~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~ 690 (842)
..++...++.+++.+...++.+|||||||+|.++..+++. +.+|+|+|+|+++++.|++++...+++ +++++++|+.+
T Consensus 19 ~~~~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~-~v~~~~~d~~~ 96 (260)
T 1vl5_A 19 IHAKGSDLAKLMQIAALKGNEEVLDVATGGGHVANAFAPF-VKKVVAFDLTEDILKVARAFIEGNGHQ-QVEYVQGDAEQ 96 (260)
T ss_dssp ----CCCHHHHHHHHTCCSCCEEEEETCTTCHHHHHHGGG-SSEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEECCC-C
T ss_pred cccCHHHHHHHHHHhCCCCCCEEEEEeCCCCHHHHHHHHh-CCEEEEEeCCHHHHHHHHHHHHhcCCC-ceEEEEecHHh
Confidence 3444555677888888889999999999999999999987 569999999999999999999988876 79999999999
Q ss_pred Cc-cCCCccEEEEcchhhhcChhhHHHHHHHHHhccccCcEEEEEeecCCCcccccccCccchhhhcccC-CCCCCCHHH
Q 035870 691 LA-KANKYDRIISCEMIEAVGHEFMEEFFGCCESLLAEDGLLVLQFISIPDERYNEYRLSSDFIKEYIFP-GGCLPSLSR 768 (842)
Q Consensus 691 ~~-~~~~fD~i~s~~~~~~~~~~~~~~~~~~~~~~LkpgG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~p-~~~~~~~~~ 768 (842)
++ ++++||+|+++.+++|+++ +..++++++++|||||++++.+...+...... .....+.....+ .....+..+
T Consensus 97 l~~~~~~fD~V~~~~~l~~~~d--~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 172 (260)
T 1vl5_A 97 MPFTDERFHIVTCRIAAHHFPN--PASFVSEAYRVLKKGGQLLLVDNSAPENDAFD--VFYNYVEKERDYSHHRAWKKSD 172 (260)
T ss_dssp CCSCTTCEEEEEEESCGGGCSC--HHHHHHHHHHHEEEEEEEEEEEEEBCSSHHHH--HHHHHHHHHHCTTCCCCCBHHH
T ss_pred CCCCCCCEEEEEEhhhhHhcCC--HHHHHHHHHHHcCCCCEEEEEEcCCCCCHHHH--HHHHHHHHhcCccccCCCCHHH
Confidence 88 6789999999999999986 78999999999999999999876655431110 000111111112 234567888
Q ss_pred HHHHHhhcCCcEEEEEEecCccHHHHHHHHHHHH
Q 035870 769 ITSAMSVASRLCVEQVENIGIHYYQTLRCWRKNF 802 (842)
Q Consensus 769 ~~~~~~~~~gf~v~~~~~~~~~y~~tl~~w~~~~ 802 (842)
+.+.+.+ +||++..++.....+ .+..|.+++
T Consensus 173 ~~~~l~~-aGf~~~~~~~~~~~~--~~~~~~~~~ 203 (260)
T 1vl5_A 173 WLKMLEE-AGFELEELHCFHKTF--IFEDWCDRM 203 (260)
T ss_dssp HHHHHHH-HTCEEEEEEEEEEEE--EHHHHHHHT
T ss_pred HHHHHHH-CCCeEEEEEEeeccC--CHHHHHHhc
Confidence 8888877 899988887765432 245565543
No 50
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.78 E-value=1.7e-18 Score=181.72 Aligned_cols=189 Identities=19% Similarity=0.231 Sum_probs=132.3
Q ss_pred ccccccCCCcccHHHHHHHHHHHHHHHcCCCCCCeEEEeccCchHHHHHHHHh-cCCEEEEEcCCHHHHHHHHHHHHHcC
Q 035870 598 YSCAVFKSEDEDLKAAQMRKVSLLIEKARVSKGQEVLEIGCGWGTLAIEIVKR-TGCKYTGITLSEEQLKYAEMKVKEAG 676 (842)
Q Consensus 598 ys~~~~~~~~~~l~~aq~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gid~s~~~~~~a~~~~~~~~ 676 (842)
|..+++......+........+.+.....++++.+|||||||+|.++..+++. ++.+|+|+|+|+.+++.|++++...+
T Consensus 6 Y~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~ 85 (276)
T 3mgg_A 6 YVHGYSEREALRLSEQAETLEKLLHHDTVYPPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNG 85 (276)
T ss_dssp -----------------CHHHHHHHTTCCCCTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTT
T ss_pred cccCCCHHHHhhHHHHHHHHHHHHhhcccCCCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcC
Confidence 44444444444555544444455555566789999999999999999999988 47899999999999999999999988
Q ss_pred CCCCeEEEEccccCCc-cCCCccEEEEcchhhhcChhhHHHHHHHHHhccccCcEEEEEeecCCCcccccc-cCccchh-
Q 035870 677 LQDLIRLYLCDYRQLA-KANKYDRIISCEMIEAVGHEFMEEFFGCCESLLAEDGLLVLQFISIPDERYNEY-RLSSDFI- 753 (842)
Q Consensus 677 l~~~v~~~~~d~~~~~-~~~~fD~i~s~~~~~~~~~~~~~~~~~~~~~~LkpgG~~~~~~~~~~~~~~~~~-~~~~~~~- 753 (842)
++ +++++++|+.+++ ++++||+|+++.+++|+++ +..+++++.++|||||++++.+.......+... .....++
T Consensus 86 ~~-~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~--~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~ 162 (276)
T 3mgg_A 86 IK-NVKFLQANIFSLPFEDSSFDHIFVCFVLEHLQS--PEEALKSLKKVLKPGGTITVIEGDHGSCYFHPEGKKAIEAWN 162 (276)
T ss_dssp CC-SEEEEECCGGGCCSCTTCEEEEEEESCGGGCSC--HHHHHHHHHHHEEEEEEEEEEEECGGGCEEESCCHHHHHHHH
T ss_pred CC-CcEEEEcccccCCCCCCCeeEEEEechhhhcCC--HHHHHHHHHHHcCCCcEEEEEEcCCCCceECCCcHHHHHHHH
Confidence 76 7999999999987 6789999999999999987 789999999999999999998754322111110 0001111
Q ss_pred ---hhcccCCCCCCCHHHHHHHHhhcCCcEEEEEEecCcc
Q 035870 754 ---KEYIFPGGCLPSLSRITSAMSVASRLCVEQVENIGIH 790 (842)
Q Consensus 754 ---~~~i~p~~~~~~~~~~~~~~~~~~gf~v~~~~~~~~~ 790 (842)
......++...+..++.+.+.+ +||++++++....+
T Consensus 163 ~~~~~~~~~~~~~~~~~~l~~~l~~-aGf~~v~~~~~~~~ 201 (276)
T 3mgg_A 163 CLIRVQAYMKGNSLVGRQIYPLLQE-SGFEKIRVEPRMVY 201 (276)
T ss_dssp HHHHHHHHTTCCTTGGGGHHHHHHH-TTCEEEEEEEEEEE
T ss_pred HHHHHHHhcCCCcchHHHHHHHHHH-CCCCeEEEeeEEEE
Confidence 1112234455566777777776 89999988876543
No 51
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.77 E-value=1e-18 Score=178.26 Aligned_cols=148 Identities=16% Similarity=0.130 Sum_probs=115.7
Q ss_pred HHHHHHHHcCCCCCCeEEEeccCchHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccC--Cc-c
Q 035870 617 KVSLLIEKARVSKGQEVLEIGCGWGTLAIEIVKRTGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQ--LA-K 693 (842)
Q Consensus 617 ~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~--~~-~ 693 (842)
..+.+++.+.+.++.+|||||||+|.++..++++ +.+|+|+|+|++|++.|++++... .+.....|+.. .. .
T Consensus 33 ~~~~il~~l~l~~g~~VLDlGcGtG~~a~~La~~-g~~V~gvD~S~~ml~~Ar~~~~~~----~v~~~~~~~~~~~~~~~ 107 (261)
T 3iv6_A 33 DRENDIFLENIVPGSTVAVIGASTRFLIEKALER-GASVTVFDFSQRMCDDLAEALADR----CVTIDLLDITAEIPKEL 107 (261)
T ss_dssp HHHHHHHTTTCCTTCEEEEECTTCHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHTSSS----CCEEEECCTTSCCCGGG
T ss_pred HHHHHHHhcCCCCcCEEEEEeCcchHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHhc----cceeeeeeccccccccc
Confidence 3456788888999999999999999999999998 889999999999999999987543 12323333222 11 2
Q ss_pred CCCccEEEEcchhhhcChhhHHHHHHHHHhccccCcEEEEEeecCCC-----------------------cccccccCcc
Q 035870 694 ANKYDRIISCEMIEAVGHEFMEEFFGCCESLLAEDGLLVLQFISIPD-----------------------ERYNEYRLSS 750 (842)
Q Consensus 694 ~~~fD~i~s~~~~~~~~~~~~~~~~~~~~~~LkpgG~~~~~~~~~~~-----------------------~~~~~~~~~~ 750 (842)
+++||+|+++.+++|+..+....+++++.++| |||+++++...... .....+....
T Consensus 108 ~~~fD~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PGG~l~lS~~~g~~~~d~~~l~~~~~~g~~~~~~~~~~~~~~~~~~~ 186 (261)
T 3iv6_A 108 AGHFDFVLNDRLINRFTTEEARRACLGMLSLV-GSGTVRASVKLGFYDIDLKLIEYGEQSGTLAKFFDPSDKTFHFREAG 186 (261)
T ss_dssp TTCCSEEEEESCGGGSCHHHHHHHHHHHHHHH-TTSEEEEEEEBSCCHHHHHHHHHHHTTTCHHHHEETTTTEEEGGGTT
T ss_pred CCCccEEEEhhhhHhCCHHHHHHHHHHHHHhC-cCcEEEEEeccCcccccHHHHHHHHhcCCeeeeecCcccceehhhhh
Confidence 47999999999999998888899999999999 99999997543211 1111123467
Q ss_pred chhhhcccCCCCCCCHHHHH
Q 035870 751 DFIKEYIFPGGCLPSLSRIT 770 (842)
Q Consensus 751 ~~~~~~i~p~~~~~~~~~~~ 770 (842)
.||++|+||+|.+|+..-+.
T Consensus 187 ~~i~~~~~p~g~~~~~~~~~ 206 (261)
T 3iv6_A 187 DVLDRALVPHGLIDKPTLLE 206 (261)
T ss_dssp HHHHHHCCCCTTCCHHHHHH
T ss_pred hHHHhccCCCCcccHHHHHH
Confidence 89999999999999876653
No 52
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.77 E-value=4e-18 Score=172.01 Aligned_cols=166 Identities=16% Similarity=0.181 Sum_probs=126.5
Q ss_pred HHHHHHcC-CCCCCeEEEeccCchHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCccCCCc
Q 035870 619 SLLIEKAR-VSKGQEVLEIGCGWGTLAIEIVKRTGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLAKANKY 697 (842)
Q Consensus 619 ~~l~~~l~-~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~~~f 697 (842)
..+++.+. ++++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.+++ .+. .+++++++|+.++.++++|
T Consensus 35 ~~~~~~l~~~~~~~~vLdiG~G~G~~~~~l~~~-~~~v~~~D~s~~~~~~a~~----~~~-~~~~~~~~d~~~~~~~~~~ 108 (218)
T 3ou2_A 35 PAALERLRAGNIRGDVLELASGTGYWTRHLSGL-ADRVTALDGSAEMIAEAGR----HGL-DNVEFRQQDLFDWTPDRQW 108 (218)
T ss_dssp HHHHHHHTTTTSCSEEEEESCTTSHHHHHHHHH-SSEEEEEESCHHHHHHHGG----GCC-TTEEEEECCTTSCCCSSCE
T ss_pred HHHHHHHhcCCCCCeEEEECCCCCHHHHHHHhc-CCeEEEEeCCHHHHHHHHh----cCC-CCeEEEecccccCCCCCce
Confidence 45555554 678889999999999999999998 8899999999999999988 344 3799999999888667899
Q ss_pred cEEEEcchhhhcChhhHHHHHHHHHhccccCcEEEEEeecCCCccccccc--CccchhhhcccCC------CCCCCHHHH
Q 035870 698 DRIISCEMIEAVGHEFMEEFFGCCESLLAEDGLLVLQFISIPDERYNEYR--LSSDFIKEYIFPG------GCLPSLSRI 769 (842)
Q Consensus 698 D~i~s~~~~~~~~~~~~~~~~~~~~~~LkpgG~~~~~~~~~~~~~~~~~~--~~~~~~~~~i~p~------~~~~~~~~~ 769 (842)
|+|+++.+++|++++....+++++.++|||||.+++.+...+........ ....++.+.+..+ ..+++..++
T Consensus 109 D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (218)
T 3ou2_A 109 DAVFFAHWLAHVPDDRFEAFWESVRSAVAPGGVVEFVDVTDHERRLEQQDDSEPEVAVRRTLQDGRSFRIVKVFRSPAEL 188 (218)
T ss_dssp EEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECCCC------------CEEEEECTTSCEEEEECCCCCHHHH
T ss_pred eEEEEechhhcCCHHHHHHHHHHHHHHcCCCeEEEEEeCCCCccccchhhhcccccceeeecCCcchhhHhhcCCCHHHH
Confidence 99999999999998777999999999999999999998876543322111 0111221211111 235689999
Q ss_pred HHHHhhcCCcEEEEEEecCccH
Q 035870 770 TSAMSVASRLCVEQVENIGIHY 791 (842)
Q Consensus 770 ~~~~~~~~gf~v~~~~~~~~~y 791 (842)
.+.+.+ +||+++..+..+.|+
T Consensus 189 ~~~l~~-aGf~v~~~~~~~~~~ 209 (218)
T 3ou2_A 189 TERLTA-LGWSCSVDEVHPGFL 209 (218)
T ss_dssp HHHHHH-TTEEEEEEEEETTEE
T ss_pred HHHHHH-CCCEEEeeeccccce
Confidence 888887 899988877665554
No 53
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.76 E-value=6.9e-18 Score=172.79 Aligned_cols=179 Identities=18% Similarity=0.235 Sum_probs=139.1
Q ss_pred HHHHHHHHHHcCCCCCCeEEEeccCchHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCc-c
Q 035870 615 MRKVSLLIEKARVSKGQEVLEIGCGWGTLAIEIVKRTGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLA-K 693 (842)
Q Consensus 615 ~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~-~ 693 (842)
......+++.+.++++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.+++++...+++ +++++++|+.+++ +
T Consensus 7 ~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~~ 84 (239)
T 1xxl_A 7 HHSLGLMIKTAECRAEHRVLDIGAGAGHTALAFSPY-VQECIGVDATKEMVEVASSFAQEKGVE-NVRFQQGTAESLPFP 84 (239)
T ss_dssp HHHHHHHHHHHTCCTTCEEEEESCTTSHHHHHHGGG-SSEEEEEESCHHHHHHHHHHHHHHTCC-SEEEEECBTTBCCSC
T ss_pred CCCcchHHHHhCcCCCCEEEEEccCcCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHcCCC-CeEEEecccccCCCC
Confidence 344567788889999999999999999999999987 679999999999999999999988876 7999999999988 6
Q ss_pred CCCccEEEEcchhhhcChhhHHHHHHHHHhccccCcEEEEEeecCCCcccccccCccchhhhcccC-CCCCCCHHHHHHH
Q 035870 694 ANKYDRIISCEMIEAVGHEFMEEFFGCCESLLAEDGLLVLQFISIPDERYNEYRLSSDFIKEYIFP-GGCLPSLSRITSA 772 (842)
Q Consensus 694 ~~~fD~i~s~~~~~~~~~~~~~~~~~~~~~~LkpgG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~p-~~~~~~~~~~~~~ 772 (842)
+++||+|++..+++|+++ +..++++++++|||||++++.+...+..... ......+.....| +....+..++.+.
T Consensus 85 ~~~fD~v~~~~~l~~~~~--~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l 160 (239)
T 1xxl_A 85 DDSFDIITCRYAAHHFSD--VRKAVREVARVLKQDGRFLLVDHYAPEDPVL--DEFVNHLNRLRDPSHVRESSLSEWQAM 160 (239)
T ss_dssp TTCEEEEEEESCGGGCSC--HHHHHHHHHHHEEEEEEEEEEEECBCSSHHH--HHHHHHHHHHHCTTCCCCCBHHHHHHH
T ss_pred CCcEEEEEECCchhhccC--HHHHHHHHHHHcCCCcEEEEEEcCCCCChhH--HHHHHHHHHhccccccCCCCHHHHHHH
Confidence 689999999999999976 8999999999999999999987765543110 0000011111111 2344678888888
Q ss_pred HhhcCCcEEEEEEecCccHHHHHHHHHHHH
Q 035870 773 MSVASRLCVEQVENIGIHYYQTLRCWRKNF 802 (842)
Q Consensus 773 ~~~~~gf~v~~~~~~~~~y~~tl~~w~~~~ 802 (842)
+.+ +||+++.+......+ ....|.+.+
T Consensus 161 l~~-aGf~~~~~~~~~~~~--~~~~w~~~~ 187 (239)
T 1xxl_A 161 FSA-NQLAYQDIQKWNLPI--QYDSWIKRG 187 (239)
T ss_dssp HHH-TTEEEEEEEEEEEEE--EHHHHHHHH
T ss_pred HHH-CCCcEEEEEeecCcc--CHHHHHHHc
Confidence 887 899998887764332 345666554
No 54
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.76 E-value=4.8e-18 Score=168.95 Aligned_cols=153 Identities=16% Similarity=0.135 Sum_probs=118.8
Q ss_pred HHHHHHcCCCCCCeEEEeccCchHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHHcC-----------CCCCeEEEEcc
Q 035870 619 SLLIEKARVSKGQEVLEIGCGWGTLAIEIVKRTGCKYTGITLSEEQLKYAEMKVKEAG-----------LQDLIRLYLCD 687 (842)
Q Consensus 619 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~~-----------l~~~v~~~~~d 687 (842)
..+++.+.++++.+|||+|||+|..+..++++ |.+|+|+|+|++|++.|+++..... ...+++++++|
T Consensus 12 ~~~~~~l~~~~~~~vLD~GCG~G~~~~~la~~-g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d 90 (203)
T 1pjz_A 12 QQYWSSLNVVPGARVLVPLCGKSQDMSWLSGQ-GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGD 90 (203)
T ss_dssp HHHHHHHCCCTTCEEEETTTCCSHHHHHHHHH-CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEEC
T ss_pred HHHHHhcccCCCCEEEEeCCCCcHhHHHHHHC-CCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECc
Confidence 34566677788999999999999999999998 8899999999999999998864210 12479999999
Q ss_pred ccCCc-cC-CCccEEEEcchhhhcChhhHHHHHHHHHhccccCcEEEEEeecCCCcccccccCccchhhhcccCCCCCCC
Q 035870 688 YRQLA-KA-NKYDRIISCEMIEAVGHEFMEEFFGCCESLLAEDGLLVLQFISIPDERYNEYRLSSDFIKEYIFPGGCLPS 765 (842)
Q Consensus 688 ~~~~~-~~-~~fD~i~s~~~~~~~~~~~~~~~~~~~~~~LkpgG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~ 765 (842)
+.+++ .+ ++||+|++..+++|++.+....++++++++|||||++++..+..+.... .. .| ...+
T Consensus 91 ~~~l~~~~~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l~~~~~~~~~~----~~--------~~--~~~~ 156 (203)
T 1pjz_A 91 FFALTARDIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLITLEYDQALL----EG--------PP--FSVP 156 (203)
T ss_dssp CSSSTHHHHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEEEESSCSSSS----SS--------CC--CCCC
T ss_pred cccCCcccCCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEEEEEecCcccc----CC--------CC--CCCC
Confidence 99998 33 7999999999999999877889999999999999996665544332100 00 01 1246
Q ss_pred HHHHHHHHhhcCCcEEEEEEecC
Q 035870 766 LSRITSAMSVASRLCVEQVENIG 788 (842)
Q Consensus 766 ~~~~~~~~~~~~gf~v~~~~~~~ 788 (842)
.+++.+.+. . ||+++.++...
T Consensus 157 ~~el~~~~~-~-gf~i~~~~~~~ 177 (203)
T 1pjz_A 157 QTWLHRVMS-G-NWEVTKVGGQD 177 (203)
T ss_dssp HHHHHHTSC-S-SEEEEEEEESS
T ss_pred HHHHHHHhc-C-CcEEEEecccc
Confidence 778776655 3 99998887754
No 55
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.76 E-value=3e-18 Score=182.02 Aligned_cols=218 Identities=15% Similarity=0.168 Sum_probs=132.6
Q ss_pred cCchHHhhhhhhhhhcCChHHHHhccCCCCcccccccCCCcccHHHHHHHHHHHHHHHcCCCCCCeEEEeccCchHHHHH
Q 035870 567 QNTLTQARRNISRHYDLSNELFSLFLDESMTYSCAVFKSEDEDLKAAQMRKVSLLIEKARVSKGQEVLEIGCGWGTLAIE 646 (842)
Q Consensus 567 ~~~~~~~~~~i~~~Yd~~~~~~~~~l~~~~~ys~~~~~~~~~~l~~aq~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~ 646 (842)
.+++....+.+.++||...+.|.... .++..+ .+...+ +.+...+....+.++.+|||||||+|.++..
T Consensus 13 ~~~~~~~~~~~~~~y~~~~~~~~~~~----~~~~~~------~~~~~~-~~~~~~l~~~~~~~~~~vLDiGcG~G~~~~~ 81 (298)
T 1ri5_A 13 DQAMEGKKEEIREHYNSIRERGRESR----QRSKTI------NIRNAN-NFIKACLIRLYTKRGDSVLDLGCGKGGDLLK 81 (298)
T ss_dssp --------------------------------CCSH------HHHHHH-HHHHHHHHHHHCCTTCEEEEETCTTTTTHHH
T ss_pred cchhhhhHHHHHHHHHHhhccccccc----ccchhh------hHHHHH-HHHHHHHHHHhCCCCCeEEEECCCCCHHHHH
Confidence 34556667789999987644332111 111111 122211 2222333233357889999999999999999
Q ss_pred HHHhcCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCc--cCCCccEEEEcchhhh--cChhhHHHHHHHHH
Q 035870 647 IVKRTGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLA--KANKYDRIISCEMIEA--VGHEFMEEFFGCCE 722 (842)
Q Consensus 647 la~~~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~--~~~~fD~i~s~~~~~~--~~~~~~~~~~~~~~ 722 (842)
+++....+|+|+|+|+.+++.|++++...++..+++++++|+.+++ ++++||+|++..+++| .+.+++..+++++.
T Consensus 82 l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~ 161 (298)
T 1ri5_A 82 YERAGIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMDLGKEFDVISSQFSFHYAFSTSESLDIAQRNIA 161 (298)
T ss_dssp HHHHTCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCCCSSCEEEEEEESCGGGGGSSHHHHHHHHHHHH
T ss_pred HHHCCCCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccccccCCCCCcCEEEECchhhhhcCCHHHHHHHHHHHH
Confidence 8887445999999999999999999998887778999999998876 4679999999999988 44556899999999
Q ss_pred hccccCcEEEEEeecCCCcc------------cccccCc---cc--hhhhccc---CC-----CCCCCHHHHHHHHhhcC
Q 035870 723 SLLAEDGLLVLQFISIPDER------------YNEYRLS---SD--FIKEYIF---PG-----GCLPSLSRITSAMSVAS 777 (842)
Q Consensus 723 ~~LkpgG~~~~~~~~~~~~~------------~~~~~~~---~~--~~~~~i~---p~-----~~~~~~~~~~~~~~~~~ 777 (842)
++|||||++++......... +...... .. +-..|.+ +. ..+.+..++.+.+++ +
T Consensus 162 ~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~l~~ll~~-a 240 (298)
T 1ri5_A 162 RHLRPGGYFIMTVPSRDVILERYKQGRMSNDFYKIELEKMEDVPMESVREYRFTLLDSVNNCIEYFVDFTRMVDGFKR-L 240 (298)
T ss_dssp HTEEEEEEEEEEEECHHHHHHHHHHTCCBCSSEEEECCCCSSCCTTTCCEEEEEETTSCSSEEEECCCHHHHHHHHHT-T
T ss_pred HhcCCCCEEEEEECCHHHHHHHHccCccCCeeEEEEeCccccccccccceEEEEEchhhcCCcccccCHHHHHHHHHH-c
Confidence 99999999999875532100 0000000 00 0001110 10 235678899888876 8
Q ss_pred CcEEEEEEecCccHHHHHH
Q 035870 778 RLCVEQVENIGIHYYQTLR 796 (842)
Q Consensus 778 gf~v~~~~~~~~~y~~tl~ 796 (842)
||+++..+.+...|...+.
T Consensus 241 Gf~~v~~~~~~~~~~~~~~ 259 (298)
T 1ri5_A 241 GLSLVERKGFIDFYEDEGR 259 (298)
T ss_dssp TEEEEEEEEHHHHHHHHHH
T ss_pred CCEEEEecCHHHHHHHHHH
Confidence 9999999988776665553
No 56
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.76 E-value=1.1e-17 Score=166.86 Aligned_cols=181 Identities=11% Similarity=0.123 Sum_probs=134.1
Q ss_pred hhhhhhhcCChHHHHhccCCCCcccccccCCCcccHHHHHHHHHHHHHHHcCCCCCCeEEEeccCchHHHHHHHHhcCCE
Q 035870 575 RNISRHYDLSNELFSLFLDESMTYSCAVFKSEDEDLKAAQMRKVSLLIEKARVSKGQEVLEIGCGWGTLAIEIVKRTGCK 654 (842)
Q Consensus 575 ~~i~~~Yd~~~~~~~~~l~~~~~ys~~~~~~~~~~l~~aq~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~ 654 (842)
+.+..+||...+.|.........+... ....+..++.. ++.+|||||||+|.++..+++. +.+
T Consensus 3 ~~~~~~y~~~a~~y~~~~~~~~~~~~~------------~~~~l~~~~~~----~~~~vLDiGcG~G~~~~~l~~~-~~~ 65 (203)
T 3h2b_A 3 DDVSKAYSSPTFDAEALLGTVISAEDP------------DRVLIEPWATG----VDGVILDVGSGTGRWTGHLASL-GHQ 65 (203)
T ss_dssp CHHHHHHHCTTTCHHHHTCSSCCTTCT------------THHHHHHHHHH----CCSCEEEETCTTCHHHHHHHHT-TCC
T ss_pred HHHHHHHhhHHHHHHHHhhhhccccHH------------HHHHHHHHhcc----CCCeEEEecCCCCHHHHHHHhc-CCe
Confidence 456677777777665544322111100 12223333333 2789999999999999999998 889
Q ss_pred EEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCc-cCCCccEEEEcchhhhcChhhHHHHHHHHHhccccCcEEEE
Q 035870 655 YTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLA-KANKYDRIISCEMIEAVGHEFMEEFFGCCESLLAEDGLLVL 733 (842)
Q Consensus 655 v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~-~~~~fD~i~s~~~~~~~~~~~~~~~~~~~~~~LkpgG~~~~ 733 (842)
|+|+|+|+++++.|+++. .+++++++|+.+++ ++++||+|+++.+++|++.+++..+++++.++|||||++++
T Consensus 66 v~gvD~s~~~~~~a~~~~------~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i 139 (203)
T 3h2b_A 66 IEGLEPATRLVELARQTH------PSVTFHHGTITDLSDSPKRWAGLLAWYSLIHMGPGELPDALVALRMAVEDGGGLLM 139 (203)
T ss_dssp EEEECCCHHHHHHHHHHC------TTSEEECCCGGGGGGSCCCEEEEEEESSSTTCCTTTHHHHHHHHHHTEEEEEEEEE
T ss_pred EEEEeCCHHHHHHHHHhC------CCCeEEeCcccccccCCCCeEEEEehhhHhcCCHHHHHHHHHHHHHHcCCCcEEEE
Confidence 999999999999999873 27999999999988 67899999999999999877799999999999999999999
Q ss_pred EeecCCCcccccccCccchhhhcccCCCCCCCHHHHHHHHhhcCCcEEEEEEecCc
Q 035870 734 QFISIPDERYNEYRLSSDFIKEYIFPGGCLPSLSRITSAMSVASRLCVEQVENIGI 789 (842)
Q Consensus 734 ~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~gf~v~~~~~~~~ 789 (842)
......... .+.. . .......+..++.+.+.+ +||+++.++....
T Consensus 140 ~~~~~~~~~--~~~~-------~-~~~~~~~~~~~~~~~l~~-~Gf~~~~~~~~~~ 184 (203)
T 3h2b_A 140 SFFSGPSLE--PMYH-------P-VATAYRWPLPELAQALET-AGFQVTSSHWDPR 184 (203)
T ss_dssp EEECCSSCE--EECC-------S-SSCEEECCHHHHHHHHHH-TTEEEEEEEECTT
T ss_pred EEccCCchh--hhhc-------h-hhhhccCCHHHHHHHHHH-CCCcEEEEEecCC
Confidence 876654411 1110 0 001234578899888887 8999999887643
No 57
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.75 E-value=3.6e-18 Score=174.44 Aligned_cols=164 Identities=16% Similarity=0.199 Sum_probs=126.0
Q ss_pred HHHHHHcC-CCCCCeEEEeccCchHHHHHHHHh-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCccCCC
Q 035870 619 SLLIEKAR-VSKGQEVLEIGCGWGTLAIEIVKR-TGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLAKANK 696 (842)
Q Consensus 619 ~~l~~~l~-~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~~~ 696 (842)
+.+++.+. ..++.+|||||||+|.++..+++. ++.+|+|+|+|+.+++.|++++...+ +++++++|+.+++..++
T Consensus 33 ~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~---~~~~~~~d~~~~~~~~~ 109 (234)
T 3dtn_A 33 GVSVSIASVDTENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGNL---KVKYIEADYSKYDFEEK 109 (234)
T ss_dssp HHHHHTCCCSCSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSCT---TEEEEESCTTTCCCCSC
T ss_pred HHHHHHhhcCCCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhccCC---CEEEEeCchhccCCCCC
Confidence 45555555 467899999999999999999998 47899999999999999999976554 79999999999885589
Q ss_pred ccEEEEcchhhhcChhhHHHHHHHHHhccccCcEEEEEeecCCCcccccccCccch-------------hhhcc--cCCC
Q 035870 697 YDRIISCEMIEAVGHEFMEEFFGCCESLLAEDGLLVLQFISIPDERYNEYRLSSDF-------------IKEYI--FPGG 761 (842)
Q Consensus 697 fD~i~s~~~~~~~~~~~~~~~~~~~~~~LkpgG~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~i--~p~~ 761 (842)
||+|++..+++|+++.....++++++++|||||++++.+...+............| +.... ....
T Consensus 110 fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (234)
T 3dtn_A 110 YDMVVSALSIHHLEDEDKKELYKRSYSILKESGIFINADLVHGETAFIENLNKTIWRQYVENSGLTEEEIAAGYERSKLD 189 (234)
T ss_dssp EEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECBCSSHHHHHHHHHHHHHHHHTSSCCHHHHHTTC----CC
T ss_pred ceEEEEeCccccCCHHHHHHHHHHHHHhcCCCcEEEEEEecCCCChhhhhHHHHHHHHHHHhcCCCHHHHHHHHHhcccc
Confidence 99999999999998866678999999999999999998877655321110000000 00000 1234
Q ss_pred CCCCHHHHHHHHhhcCCcEEEEEEe
Q 035870 762 CLPSLSRITSAMSVASRLCVEQVEN 786 (842)
Q Consensus 762 ~~~~~~~~~~~~~~~~gf~v~~~~~ 786 (842)
..++.+++.+.+++ +||+++++..
T Consensus 190 ~~~~~~~~~~ll~~-aGF~~v~~~~ 213 (234)
T 3dtn_A 190 KDIEMNQQLNWLKE-AGFRDVSCIY 213 (234)
T ss_dssp CCCBHHHHHHHHHH-TTCEEEEEEE
T ss_pred cccCHHHHHHHHHH-cCCCceeeee
Confidence 45688898888887 8999887654
No 58
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.75 E-value=4.4e-18 Score=171.98 Aligned_cols=163 Identities=16% Similarity=0.140 Sum_probs=124.1
Q ss_pred HHHHHHcCCCCCCeEEEeccCchHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCccCCCcc
Q 035870 619 SLLIEKARVSKGQEVLEIGCGWGTLAIEIVKRTGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLAKANKYD 698 (842)
Q Consensus 619 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~~~fD 698 (842)
..+++.+...++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.+++++. .+++++++|+.+++..++||
T Consensus 35 ~~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~-----~~~~~~~~d~~~~~~~~~fD 108 (220)
T 3hnr_A 35 EDILEDVVNKSFGNVLEFGVGTGNLTNKLLLA-GRTVYGIEPSREMRMIAKEKLP-----KEFSITEGDFLSFEVPTSID 108 (220)
T ss_dssp HHHHHHHHHTCCSEEEEECCTTSHHHHHHHHT-TCEEEEECSCHHHHHHHHHHSC-----TTCCEESCCSSSCCCCSCCS
T ss_pred HHHHHHhhccCCCeEEEeCCCCCHHHHHHHhC-CCeEEEEeCCHHHHHHHHHhCC-----CceEEEeCChhhcCCCCCeE
Confidence 45566666668899999999999999999998 8899999999999999998864 37999999999988338999
Q ss_pred EEEEcchhhhcChhhHHHHHHHHHhccccCcEEEEEeecCCCcccccc-cC---ccchhh-hcccCCCCCCCHHHHHHHH
Q 035870 699 RIISCEMIEAVGHEFMEEFFGCCESLLAEDGLLVLQFISIPDERYNEY-RL---SSDFIK-EYIFPGGCLPSLSRITSAM 773 (842)
Q Consensus 699 ~i~s~~~~~~~~~~~~~~~~~~~~~~LkpgG~~~~~~~~~~~~~~~~~-~~---~~~~~~-~~i~p~~~~~~~~~~~~~~ 773 (842)
+|+++.+++|+++.....+++++.++|||||.+++.+........... .. ...+.. ....+...+++.+++.+.+
T Consensus 109 ~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 188 (220)
T 3hnr_A 109 TIVSTYAFHHLTDDEKNVAIAKYSQLLNKGGKIVFADTIFADQDAYDKTVEAAKQRGFHQLANDLQTEYYTRIPVMQTIF 188 (220)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEEECBSSHHHHHHHHHHHHHTTCHHHHHHHHHSCCCBHHHHHHHH
T ss_pred EEEECcchhcCChHHHHHHHHHHHHhcCCCCEEEEEeccccChHHHHHHHHHHHhCCCccchhhcchhhcCCHHHHHHHH
Confidence 999999999999855556999999999999999998765543221100 00 000000 0001113456889998888
Q ss_pred hhcCCcEEEEEEecC
Q 035870 774 SVASRLCVEQVENIG 788 (842)
Q Consensus 774 ~~~~gf~v~~~~~~~ 788 (842)
.+ +||+++......
T Consensus 189 ~~-aGf~v~~~~~~~ 202 (220)
T 3hnr_A 189 EN-NGFHVTFTRLNH 202 (220)
T ss_dssp HH-TTEEEEEEECSS
T ss_pred HH-CCCEEEEeeccc
Confidence 87 899998876543
No 59
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.74 E-value=2.6e-17 Score=166.21 Aligned_cols=154 Identities=17% Similarity=0.166 Sum_probs=129.5
Q ss_pred HHHHHHcCCCCCCeEEEeccCchHHHHHHHHhc--CCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCc-cCC
Q 035870 619 SLLIEKARVSKGQEVLEIGCGWGTLAIEIVKRT--GCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLA-KAN 695 (842)
Q Consensus 619 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~la~~~--~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~-~~~ 695 (842)
+.+++.+.+.++.+|||||||+|.++..+++.. ..+|+|+|+|+++++.|++++...+++ +++++++|+.+++ +++
T Consensus 27 ~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~~~~~~~d~~~~~~~~~ 105 (219)
T 3dh0_A 27 EKVLKEFGLKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLK-NVEVLKSEENKIPLPDN 105 (219)
T ss_dssp HHHHHHHTCCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCT-TEEEEECBTTBCSSCSS
T ss_pred HHHHHHhCCCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCC-cEEEEecccccCCCCCC
Confidence 467777888899999999999999999999883 479999999999999999999998886 7999999999987 668
Q ss_pred CccEEEEcchhhhcChhhHHHHHHHHHhccccCcEEEEEeecCCCcccccccCccchhhhcccCCCCCCCHHHHHHHHhh
Q 035870 696 KYDRIISCEMIEAVGHEFMEEFFGCCESLLAEDGLLVLQFISIPDERYNEYRLSSDFIKEYIFPGGCLPSLSRITSAMSV 775 (842)
Q Consensus 696 ~fD~i~s~~~~~~~~~~~~~~~~~~~~~~LkpgG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~ 775 (842)
+||+|+++.+++|+++ +..+++++.++|||||++++.++......... .. ....+.+++.+.+.+
T Consensus 106 ~fD~v~~~~~l~~~~~--~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~-----~~--------~~~~~~~~~~~~l~~ 170 (219)
T 3dh0_A 106 TVDFIFMAFTFHELSE--PLKFLEELKRVAKPFAYLAIIDWKKEERDKGP-----PP--------EEVYSEWEVGLILED 170 (219)
T ss_dssp CEEEEEEESCGGGCSS--HHHHHHHHHHHEEEEEEEEEEEECSSCCSSSC-----CG--------GGSCCHHHHHHHHHH
T ss_pred CeeEEEeehhhhhcCC--HHHHHHHHHHHhCCCeEEEEEEecccccccCC-----ch--------hcccCHHHHHHHHHH
Confidence 9999999999999976 79999999999999999999887655432110 11 123478888888877
Q ss_pred cCCcEEEEEEecCc
Q 035870 776 ASRLCVEQVENIGI 789 (842)
Q Consensus 776 ~~gf~v~~~~~~~~ 789 (842)
+||+++....++.
T Consensus 171 -~Gf~~~~~~~~~~ 183 (219)
T 3dh0_A 171 -AGIRVGRVVEVGK 183 (219)
T ss_dssp -TTCEEEEEEEETT
T ss_pred -CCCEEEEEEeeCC
Confidence 8999988877654
No 60
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.73 E-value=4.9e-18 Score=171.45 Aligned_cols=166 Identities=16% Similarity=0.172 Sum_probs=128.3
Q ss_pred HHHHHHHHHcCCCCCCeEEEeccCchHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCc-cC
Q 035870 616 RKVSLLIEKARVSKGQEVLEIGCGWGTLAIEIVKRTGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLA-KA 694 (842)
Q Consensus 616 ~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~-~~ 694 (842)
...+.+++.+..+++ +|||||||+|.++..+++.++.+|+|+|+|+.+++.|++++...++.++++++++|+.+++ ++
T Consensus 31 ~~~~~~~~~~~~~~~-~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~ 109 (219)
T 3dlc_A 31 IIAENIINRFGITAG-TCIDIGSGPGALSIALAKQSDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIPIED 109 (219)
T ss_dssp HHHHHHHHHHCCCEE-EEEEETCTTSHHHHHHHHHSEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCSSCT
T ss_pred HHHHHHHHhcCCCCC-EEEEECCCCCHHHHHHHHcCCCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHCCCCc
Confidence 344677777777777 9999999999999999998778999999999999999999999998889999999999987 66
Q ss_pred CCccEEEEcchhhhcChhhHHHHHHHHHhccccCcEEEEEeecCCCcccccccC-----ccchhhhcccCCCCCCCHHHH
Q 035870 695 NKYDRIISCEMIEAVGHEFMEEFFGCCESLLAEDGLLVLQFISIPDERYNEYRL-----SSDFIKEYIFPGGCLPSLSRI 769 (842)
Q Consensus 695 ~~fD~i~s~~~~~~~~~~~~~~~~~~~~~~LkpgG~~~~~~~~~~~~~~~~~~~-----~~~~~~~~i~p~~~~~~~~~~ 769 (842)
++||+|+++.+++|+.+ +..++++++++|||||++++.+............. ...|.. .+.+.....+.+++
T Consensus 110 ~~~D~v~~~~~l~~~~~--~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 186 (219)
T 3dlc_A 110 NYADLIVSRGSVFFWED--VATAFREIYRILKSGGKTYIGGGFGNKELRDSISAEMIRKNPDWKE-FNRKNISQENVERF 186 (219)
T ss_dssp TCEEEEEEESCGGGCSC--HHHHHHHHHHHEEEEEEEEEEECCSSHHHHHHHHHHHHHHCTTHHH-HHHHHSSHHHHHHH
T ss_pred ccccEEEECchHhhccC--HHHHHHHHHHhCCCCCEEEEEeccCcHHHHHHHHHHHHHhHHHHHh-hhhhccccCCHHHH
Confidence 89999999999999965 89999999999999999999765443321111000 011111 00011223366788
Q ss_pred HHHHhhcCCcEEEEEEe
Q 035870 770 TSAMSVASRLCVEQVEN 786 (842)
Q Consensus 770 ~~~~~~~~gf~v~~~~~ 786 (842)
.+.+.+ +||++.++..
T Consensus 187 ~~~l~~-aGf~~v~~~~ 202 (219)
T 3dlc_A 187 QNVLDE-IGISSYEIIL 202 (219)
T ss_dssp HHHHHH-HTCSSEEEEE
T ss_pred HHHHHH-cCCCeEEEEe
Confidence 877776 8998776654
No 61
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.73 E-value=6.8e-19 Score=177.54 Aligned_cols=174 Identities=18% Similarity=0.193 Sum_probs=117.3
Q ss_pred CCCCCeEEEeccCchHHHHHHHHh-cCCEEEEEcCC-HHHHHHH---HHHHHHcCCCCCeEEEEccccCCcc--CCCccE
Q 035870 627 VSKGQEVLEIGCGWGTLAIEIVKR-TGCKYTGITLS-EEQLKYA---EMKVKEAGLQDLIRLYLCDYRQLAK--ANKYDR 699 (842)
Q Consensus 627 ~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gid~s-~~~~~~a---~~~~~~~~l~~~v~~~~~d~~~~~~--~~~fD~ 699 (842)
.+++.+|||||||+|.++..+++. ++.+|+|+|+| +.|++.| ++++...+++ +++++++|+.+++. .+.+|.
T Consensus 22 ~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~-~v~~~~~d~~~l~~~~~d~v~~ 100 (225)
T 3p2e_A 22 GQFDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGGLS-NVVFVIAAAESLPFELKNIADS 100 (225)
T ss_dssp TTCSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTCCS-SEEEECCBTTBCCGGGTTCEEE
T ss_pred CCCCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCC-CeEEEEcCHHHhhhhccCeEEE
Confidence 467889999999999999999965 67899999999 6666666 8888787876 79999999999962 244555
Q ss_pred EEEcchhh----hcChhhHHHHHHHHHhccccCcEEEEEeecCCCcccccccCccchhhhcccCCCCCCCH-----HHHH
Q 035870 700 IISCEMIE----AVGHEFMEEFFGCCESLLAEDGLLVLQFISIPDERYNEYRLSSDFIKEYIFPGGCLPSL-----SRIT 770 (842)
Q Consensus 700 i~s~~~~~----~~~~~~~~~~~~~~~~~LkpgG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~-----~~~~ 770 (842)
|+++.... |... ....++++++++|||||++++....... +... .+... ..| .++. .++.
T Consensus 101 i~~~~~~~~~~~~~~~-~~~~~l~~~~r~LkpGG~l~i~~~~~~~--~~~~----~~~~~-~~~---~~~~~~~~~~el~ 169 (225)
T 3p2e_A 101 ISILFPWGTLLEYVIK-PNRDILSNVADLAKKEAHFEFVTTYSDS--YEEA----EIKKR-GLP---LLSKAYFLSEQYK 169 (225)
T ss_dssp EEEESCCHHHHHHHHT-TCHHHHHHHHTTEEEEEEEEEEECCCC------------------------CCHHHHHSHHHH
T ss_pred EEEeCCCcHHhhhhhc-chHHHHHHHHHhcCCCcEEEEEEecccc--chhc----hhhhc-CCC---CCChhhcchHHHH
Confidence 55543322 2111 1367899999999999999994322221 1110 00000 011 1122 2366
Q ss_pred HHHhhcCCcEEEEEEecCccHHHHHHHHHHHHHHhHHHHHhccCCHHHHH
Q 035870 771 SAMSVASRLCVEQVENIGIHYYQTLRCWRKNFMEKQSKILALGFNDKFIR 820 (842)
Q Consensus 771 ~~~~~~~gf~v~~~~~~~~~y~~tl~~w~~~~~~~~~~~~~~g~~~~~~r 820 (842)
+.+.+ +||++.+.+.++.+|..++ +..|.++...||||+|.|
T Consensus 170 ~~l~~-aGf~v~~~~~~~~~~~~~~-------~~~w~~~~~~~~~~~f~r 211 (225)
T 3p2e_A 170 AELSN-SGFRIDDVKELDNEYVKQF-------NSLWAKRLAFGRKRSFFR 211 (225)
T ss_dssp HHHHH-HTCEEEEEEEECHHHHTTC-------CSHHHHHHHHSSCCCEEE
T ss_pred HHHHH-cCCCeeeeeecCHHHHHHH-------HHHHhcccCccchhHHHH
Confidence 66766 8999999999999998775 223444445688888866
No 62
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.73 E-value=2.5e-17 Score=168.31 Aligned_cols=153 Identities=18% Similarity=0.185 Sum_probs=124.4
Q ss_pred HHHHHHcCCCCCCeEEEeccCchHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCccCCCcc
Q 035870 619 SLLIEKARVSKGQEVLEIGCGWGTLAIEIVKRTGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLAKANKYD 698 (842)
Q Consensus 619 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~~~fD 698 (842)
..++..+..+++ +|||||||+|.++..+++. +.+|+|+|+|+.+++.|++++...+...+++++++|+.+++++++||
T Consensus 57 ~~~~~~~~~~~~-~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD 134 (235)
T 3lcc_A 57 VHLVDTSSLPLG-RALVPGCGGGHDVVAMASP-ERFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWRPTELFD 134 (235)
T ss_dssp HHHHHTTCSCCE-EEEEETCTTCHHHHHHCBT-TEEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCCCSSCEE
T ss_pred HHHHHhcCCCCC-CEEEeCCCCCHHHHHHHhC-CCeEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCCCCCCee
Confidence 345555555554 9999999999999999875 88999999999999999999887655568999999999988667999
Q ss_pred EEEEcchhhhcChhhHHHHHHHHHhccccCcEEEEEeecCCCcccccccCccchhhhcccCCCCCCCHHHHHHHHhhcCC
Q 035870 699 RIISCEMIEAVGHEFMEEFFGCCESLLAEDGLLVLQFISIPDERYNEYRLSSDFIKEYIFPGGCLPSLSRITSAMSVASR 778 (842)
Q Consensus 699 ~i~s~~~~~~~~~~~~~~~~~~~~~~LkpgG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~g 778 (842)
+|+++.+++|++.+....+++++.++|||||++++..+....... ... ...+.+++.+.+.+ +|
T Consensus 135 ~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~-----~~~----------~~~~~~~~~~~l~~-~G 198 (235)
T 3lcc_A 135 LIFDYVFFCAIEPEMRPAWAKSMYELLKPDGELITLMYPITDHVG-----GPP----------YKVDVSTFEEVLVP-IG 198 (235)
T ss_dssp EEEEESSTTTSCGGGHHHHHHHHHHHEEEEEEEEEEECCCSCCCS-----CSS----------CCCCHHHHHHHHGG-GT
T ss_pred EEEEChhhhcCCHHHHHHHHHHHHHHCCCCcEEEEEEecccccCC-----CCC----------ccCCHHHHHHHHHH-cC
Confidence 999999999999778999999999999999999997765432110 000 11467888887776 89
Q ss_pred cEEEEEEecCc
Q 035870 779 LCVEQVENIGI 789 (842)
Q Consensus 779 f~v~~~~~~~~ 789 (842)
|+++.++....
T Consensus 199 f~~~~~~~~~~ 209 (235)
T 3lcc_A 199 FKAVSVEENPH 209 (235)
T ss_dssp EEEEEEEECTT
T ss_pred CeEEEEEecCC
Confidence 99999887643
No 63
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.73 E-value=5.9e-17 Score=167.62 Aligned_cols=164 Identities=13% Similarity=0.144 Sum_probs=130.2
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCeEEEeccCchHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccc
Q 035870 610 LKAAQMRKVSLLIEKARVSKGQEVLEIGCGWGTLAIEIVKRTGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYR 689 (842)
Q Consensus 610 l~~aq~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~ 689 (842)
+...+......+++.+...++.+|||||||+|.++..+++....+|+++|+|+.+++.|++++... .+++++++|+.
T Consensus 74 ~~~~~~~~~~~~l~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~---~~~~~~~~d~~ 150 (254)
T 1xtp_A 74 VHDVDIEGSRNFIASLPGHGTSRALDCGAGIGRITKNLLTKLYATTDLLEPVKHMLEEAKRELAGM---PVGKFILASME 150 (254)
T ss_dssp GHHHHHHHHHHHHHTSTTCCCSEEEEETCTTTHHHHHTHHHHCSEEEEEESCHHHHHHHHHHTTTS---SEEEEEESCGG
T ss_pred cCHHHHHHHHHHHHhhcccCCCEEEEECCCcCHHHHHHHHhhcCEEEEEeCCHHHHHHHHHHhccC---CceEEEEccHH
Confidence 344555666778888887889999999999999999999885568999999999999999987654 37999999999
Q ss_pred CCc-cCCCccEEEEcchhhhcChhhHHHHHHHHHhccccCcEEEEEeecCCCcccccccCccchhhhcccCCCCCCCHHH
Q 035870 690 QLA-KANKYDRIISCEMIEAVGHEFMEEFFGCCESLLAEDGLLVLQFISIPDERYNEYRLSSDFIKEYIFPGGCLPSLSR 768 (842)
Q Consensus 690 ~~~-~~~~fD~i~s~~~~~~~~~~~~~~~~~~~~~~LkpgG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~ 768 (842)
+++ ++++||+|++..+++|++++++..++++++++|||||++++.+.......+. . .. .......+..+
T Consensus 151 ~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~--------~-~~-~~~~~~~~~~~ 220 (254)
T 1xtp_A 151 TATLPPNTYDLIVIQWTAIYLTDADFVKFFKHCQQALTPNGYIFFKENCSTGDRFL--------V-DK-EDSSLTRSDIH 220 (254)
T ss_dssp GCCCCSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBC--CCEE--------E-ET-TTTEEEBCHHH
T ss_pred HCCCCCCCeEEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCcccce--------e-cc-cCCcccCCHHH
Confidence 887 6689999999999999988779999999999999999999987543322110 0 00 01112347888
Q ss_pred HHHHHhhcCCcEEEEEEec
Q 035870 769 ITSAMSVASRLCVEQVENI 787 (842)
Q Consensus 769 ~~~~~~~~~gf~v~~~~~~ 787 (842)
+.+.+.+ +||+++.++..
T Consensus 221 ~~~~l~~-aGf~~~~~~~~ 238 (254)
T 1xtp_A 221 YKRLFNE-SGVRVVKEAFQ 238 (254)
T ss_dssp HHHHHHH-HTCCEEEEEEC
T ss_pred HHHHHHH-CCCEEEEeeec
Confidence 8888876 89999887764
No 64
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.72 E-value=1.3e-17 Score=176.96 Aligned_cols=170 Identities=16% Similarity=0.217 Sum_probs=127.6
Q ss_pred HHHHHHHHHcCCCCCCeEEEeccCchHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHHcCCC--CCeEEEEccccCCcc
Q 035870 616 RKVSLLIEKARVSKGQEVLEIGCGWGTLAIEIVKRTGCKYTGITLSEEQLKYAEMKVKEAGLQ--DLIRLYLCDYRQLAK 693 (842)
Q Consensus 616 ~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~~l~--~~v~~~~~d~~~~~~ 693 (842)
.....+++.+..+++ +|||||||+|.++..+++. +.+|+|+|+|+.+++.|++++...++. .+++++++|+.+++.
T Consensus 70 ~~~~~~~~~~~~~~~-~vLDlGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~ 147 (299)
T 3g2m_A 70 SEAREFATRTGPVSG-PVLELAAGMGRLTFPFLDL-GWEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFAL 147 (299)
T ss_dssp HHHHHHHHHHCCCCS-CEEEETCTTTTTHHHHHTT-TCCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCCC
T ss_pred HHHHHHHHhhCCCCC-cEEEEeccCCHHHHHHHHc-CCeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcCCc
Confidence 344566666665555 9999999999999999998 889999999999999999999876632 489999999999886
Q ss_pred CCCccEEEE-cchhhhcChhhHHHHHHHHHhccccCcEEEEEeecCCCcccccccC--------------------ccch
Q 035870 694 ANKYDRIIS-CEMIEAVGHEFMEEFFGCCESLLAEDGLLVLQFISIPDERYNEYRL--------------------SSDF 752 (842)
Q Consensus 694 ~~~fD~i~s-~~~~~~~~~~~~~~~~~~~~~~LkpgG~~~~~~~~~~~~~~~~~~~--------------------~~~~ 752 (842)
+++||+|++ ..+++|++.+....++++++++|||||++++............... ....
T Consensus 148 ~~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 227 (299)
T 3g2m_A 148 DKRFGTVVISSGSINELDEADRRGLYASVREHLEPGGKFLLSLAMSEAAESEPLERKQELPGRSGRRYVLHVRHLPAEEI 227 (299)
T ss_dssp SCCEEEEEECHHHHTTSCHHHHHHHHHHHHHHEEEEEEEEEEEECCHHHHSCCCCC-------------CCEEEEEEEEE
T ss_pred CCCcCEEEECCcccccCCHHHHHHHHHHHHHHcCCCcEEEEEeecCccccccchhccceeecCCCcEEEEEEEEeccccE
Confidence 789999986 4778888877789999999999999999999877654211000000 0000
Q ss_pred hhhcccCCC-------------CCCCHHHHHHHHhhcCCcEEEEEEecC
Q 035870 753 IKEYIFPGG-------------CLPSLSRITSAMSVASRLCVEQVENIG 788 (842)
Q Consensus 753 ~~~~i~p~~-------------~~~~~~~~~~~~~~~~gf~v~~~~~~~ 788 (842)
..-.+++.+ .+.+.+++.+.+++ +||+++.++.+.
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~t~~el~~ll~~-aGF~v~~~~~~~ 275 (299)
T 3g2m_A 228 QEITIHPADETTDPFVVCTHRRRLLAPDQVVRELVR-SGFDVIAQTPFA 275 (299)
T ss_dssp EEEEEEESCC--CCCCEEEEEEEEECHHHHHHHHHH-TTCEEEEEEEEC
T ss_pred EEEEEEeccCCCCcEEEEEEEEEEeCHHHHHHHHHH-CCCEEEEEEecC
Confidence 000111111 14589999988887 899999998875
No 65
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.72 E-value=1.7e-17 Score=176.54 Aligned_cols=167 Identities=17% Similarity=0.203 Sum_probs=129.9
Q ss_pred HcCCCCCCeEEEeccCchHHHHHHH--HhcCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCccCCCccEEE
Q 035870 624 KARVSKGQEVLEIGCGWGTLAIEIV--KRTGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLAKANKYDRII 701 (842)
Q Consensus 624 ~l~~~~~~~vLDiGcG~G~~~~~la--~~~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~~~fD~i~ 701 (842)
...++++.+|||||||+|.++..++ ..++++|+|+|+|+.+++.|++++...++.++++++++|+.+++..++||+|+
T Consensus 113 ~~~l~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~ 192 (305)
T 3ocj_A 113 QRHLRPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLDTREGYDLLT 192 (305)
T ss_dssp HHHCCTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCCCCSCEEEEE
T ss_pred HhhCCCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCCccCCeEEEE
Confidence 3346789999999999999999985 33688999999999999999999999888878999999999988448999999
Q ss_pred EcchhhhcCh-hhHHHHHHHHHhccccCcEEEEEeecCCCcccccc-------cCccchhhhcccCCC------CCCCHH
Q 035870 702 SCEMIEAVGH-EFMEEFFGCCESLLAEDGLLVLQFISIPDERYNEY-------RLSSDFIKEYIFPGG------CLPSLS 767 (842)
Q Consensus 702 s~~~~~~~~~-~~~~~~~~~~~~~LkpgG~~~~~~~~~~~~~~~~~-------~~~~~~~~~~i~p~~------~~~~~~ 767 (842)
++.+++|+++ +....++++++++|||||++++.++..+....... .....+..++.++.. .+.+.+
T Consensus 193 ~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (305)
T 3ocj_A 193 SNGLNIYEPDDARVTELYRRFWQALKPGGALVTSFLTPPPALSPDSPWDMQAIDPHDLQLQQLVFTRLIQPRWNALRTHA 272 (305)
T ss_dssp CCSSGGGCCCHHHHHHHHHHHHHHEEEEEEEEEECCCCCTTTCTTCCCCGGGSCHHHHHHHHHHHHHTTCCSCCCCCCHH
T ss_pred ECChhhhcCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCCcccccccceeeccccchhhhhhhHHHHHHhhhhhccCCHH
Confidence 9999999965 33456899999999999999998876543221111 111112233333221 456899
Q ss_pred HHHHHHhhcCCcEEEEEEecCccH
Q 035870 768 RITSAMSVASRLCVEQVENIGIHY 791 (842)
Q Consensus 768 ~~~~~~~~~~gf~v~~~~~~~~~y 791 (842)
++.+.+++ +||+++.++....++
T Consensus 273 ~~~~~l~~-aGF~~v~~~~~~~~~ 295 (305)
T 3ocj_A 273 QTRAQLEE-AGFTDLRFEDDRARL 295 (305)
T ss_dssp HHHHHHHH-TTCEEEEEECCTTSS
T ss_pred HHHHHHHH-CCCEEEEEEcccCce
Confidence 99988887 899999988765554
No 66
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.72 E-value=4.5e-17 Score=164.11 Aligned_cols=119 Identities=18% Similarity=0.249 Sum_probs=103.2
Q ss_pred HHHHHHHHcCCCCCCeEEEeccCchHHHHHHHHh-cCCEEEEEcCCHHHHHHHHHHHHHcCCCC----CeEEEEccccCC
Q 035870 617 KVSLLIEKARVSKGQEVLEIGCGWGTLAIEIVKR-TGCKYTGITLSEEQLKYAEMKVKEAGLQD----LIRLYLCDYRQL 691 (842)
Q Consensus 617 ~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gid~s~~~~~~a~~~~~~~~l~~----~v~~~~~d~~~~ 691 (842)
..+.+++.+...++.+|||||||+|.++..+++. +..+|+|+|+|+++++.|++++...++++ +++++++|+...
T Consensus 17 ~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~ 96 (217)
T 3jwh_A 17 RMNGVVAALKQSNARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQ 96 (217)
T ss_dssp HHHHHHHHHHHTTCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSC
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCcccc
Confidence 3455666666678889999999999999999987 33799999999999999999998877764 799999999777
Q ss_pred c-cCCCccEEEEcchhhhcChhhHHHHHHHHHhccccCcEEEEEe
Q 035870 692 A-KANKYDRIISCEMIEAVGHEFMEEFFGCCESLLAEDGLLVLQF 735 (842)
Q Consensus 692 ~-~~~~fD~i~s~~~~~~~~~~~~~~~~~~~~~~LkpgG~~~~~~ 735 (842)
+ +.++||+|+++.+++|+++.....+++++.++|||||.+++..
T Consensus 97 ~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 141 (217)
T 3jwh_A 97 DKRFHGYDAATVIEVIEHLDLSRLGAFERVLFEFAQPKIVIVTTP 141 (217)
T ss_dssp CGGGCSCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEE
T ss_pred cccCCCcCEEeeHHHHHcCCHHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 6 5589999999999999998777999999999999999777644
No 67
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.72 E-value=6.6e-17 Score=163.19 Aligned_cols=120 Identities=19% Similarity=0.291 Sum_probs=102.6
Q ss_pred HHHHHHHHHcCCCCCCeEEEeccCchHHHHHHHHh-cCCEEEEEcCCHHHHHHHHHHHHHcCCCC----CeEEEEccccC
Q 035870 616 RKVSLLIEKARVSKGQEVLEIGCGWGTLAIEIVKR-TGCKYTGITLSEEQLKYAEMKVKEAGLQD----LIRLYLCDYRQ 690 (842)
Q Consensus 616 ~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gid~s~~~~~~a~~~~~~~~l~~----~v~~~~~d~~~ 690 (842)
...+.+++.+...++.+|||||||+|.++..+++. +..+|+|+|+|+.+++.|++++...++++ +++++++|+..
T Consensus 16 ~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~ 95 (219)
T 3jwg_A 16 QRLGTVVAVLKSVNAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVY 95 (219)
T ss_dssp HHHHHHHHHHHHTTCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSS
T ss_pred HHHHHHHHHHhhcCCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCcccc
Confidence 34455556655567889999999999999999987 33799999999999999999998777764 89999999987
Q ss_pred Cc-cCCCccEEEEcchhhhcChhhHHHHHHHHHhccccCcEEEEEe
Q 035870 691 LA-KANKYDRIISCEMIEAVGHEFMEEFFGCCESLLAEDGLLVLQF 735 (842)
Q Consensus 691 ~~-~~~~fD~i~s~~~~~~~~~~~~~~~~~~~~~~LkpgG~~~~~~ 735 (842)
.+ .+++||+|++..+++|+++.....+++++.++|||||.++...
T Consensus 96 ~~~~~~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~~i~~~ 141 (219)
T 3jwg_A 96 RDKRFSGYDAATVIEVIEHLDENRLQAFEKVLFEFTRPQTVIVSTP 141 (219)
T ss_dssp CCGGGTTCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEE
T ss_pred cccccCCCCEEEEHHHHHhCCHHHHHHHHHHHHHhhCCCEEEEEcc
Confidence 77 5689999999999999998667899999999999999666543
No 68
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.72 E-value=8e-17 Score=161.52 Aligned_cols=147 Identities=18% Similarity=0.230 Sum_probs=119.3
Q ss_pred HHHHHHcCCCCCCeEEEeccCchHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCccCCCcc
Q 035870 619 SLLIEKARVSKGQEVLEIGCGWGTLAIEIVKRTGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLAKANKYD 698 (842)
Q Consensus 619 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~~~fD 698 (842)
..++.. ++++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.++++. +++++++|+.+++.+++||
T Consensus 35 ~~~~~~--~~~~~~vLDiGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~-------~~~~~~~d~~~~~~~~~fD 104 (211)
T 3e23_A 35 TKFLGE--LPAGAKILELGCGAGYQAEAMLAA-GFDVDATDGSPELAAEASRRL-------GRPVRTMLFHQLDAIDAYD 104 (211)
T ss_dssp HHHHTT--SCTTCEEEESSCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHH-------TSCCEECCGGGCCCCSCEE
T ss_pred HHHHHh--cCCCCcEEEECCCCCHHHHHHHHc-CCeEEEECCCHHHHHHHHHhc-------CCceEEeeeccCCCCCcEE
Confidence 344444 457889999999999999999998 889999999999999999987 4678899999988778999
Q ss_pred EEEEcchhhhcChhhHHHHHHHHHhccccCcEEEEEeecCCCcccccccCccchhhhcccCCCCCCCHHHHHHHHhhcCC
Q 035870 699 RIISCEMIEAVGHEFMEEFFGCCESLLAEDGLLVLQFISIPDERYNEYRLSSDFIKEYIFPGGCLPSLSRITSAMSVASR 778 (842)
Q Consensus 699 ~i~s~~~~~~~~~~~~~~~~~~~~~~LkpgG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~g 778 (842)
+|+++.+++|++.+++..+++++.++|||||++++............. ..+ ....+.+++.+.+.+ +|
T Consensus 105 ~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~-------~~~----~~~~~~~~~~~~l~~-aG 172 (211)
T 3e23_A 105 AVWAHACLLHVPRDELADVLKLIWRALKPGGLFYASYKSGEGEGRDKL-------ARY----YNYPSEEWLRARYAE-AG 172 (211)
T ss_dssp EEEECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECCSSCEECTT-------SCE----ECCCCHHHHHHHHHH-HC
T ss_pred EEEecCchhhcCHHHHHHHHHHHHHhcCCCcEEEEEEcCCCccccccc-------chh----ccCCCHHHHHHHHHh-CC
Confidence 999999999999777999999999999999999998654433211111 011 134688999888887 89
Q ss_pred -cEEEEEEec
Q 035870 779 -LCVEQVENI 787 (842)
Q Consensus 779 -f~v~~~~~~ 787 (842)
|+++.++..
T Consensus 173 ~f~~~~~~~~ 182 (211)
T 3e23_A 173 TWASVAVESS 182 (211)
T ss_dssp CCSEEEEEEE
T ss_pred CcEEEEEEec
Confidence 998887654
No 69
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.72 E-value=1.9e-17 Score=169.85 Aligned_cols=147 Identities=16% Similarity=0.251 Sum_probs=118.9
Q ss_pred CCCCeEEEeccCchHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCc-cCCCccEEEEcchh
Q 035870 628 SKGQEVLEIGCGWGTLAIEIVKRTGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLA-KANKYDRIISCEMI 706 (842)
Q Consensus 628 ~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~-~~~~fD~i~s~~~~ 706 (842)
+++.+|||||||+|.++..+++....+|+++|+|+.+++.|++++...+ ..+++++++|+.+++ ++++||+|++..++
T Consensus 78 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 156 (241)
T 2ex4_A 78 TGTSCALDCGAGIGRITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEG-KRVRNYFCCGLQDFTPEPDSYDVIWIQWVI 156 (241)
T ss_dssp CCCSEEEEETCTTTHHHHHTTTTTCSEEEEEESCHHHHHHHHHHTGGGG-GGEEEEEECCGGGCCCCSSCEEEEEEESCG
T ss_pred CCCCEEEEECCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHhhhcC-CceEEEEEcChhhcCCCCCCEEEEEEcchh
Confidence 3688999999999999999988755699999999999999999987654 236899999998887 55689999999999
Q ss_pred hhcChhhHHHHHHHHHhccccCcEEEEEeecCCCcccccccCccchhhhcccCCCCCCCHHHHHHHHhhcCCcEEEEEEe
Q 035870 707 EAVGHEFMEEFFGCCESLLAEDGLLVLQFISIPDERYNEYRLSSDFIKEYIFPGGCLPSLSRITSAMSVASRLCVEQVEN 786 (842)
Q Consensus 707 ~~~~~~~~~~~~~~~~~~LkpgG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~gf~v~~~~~ 786 (842)
+|+++.....+++++.++|||||++++.+....... .+.. ..+....+..++.+.+.+ +||+++..+.
T Consensus 157 ~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~--~~~~---------~~~~~~~~~~~~~~~l~~-aGf~~~~~~~ 224 (241)
T 2ex4_A 157 GHLTDQHLAEFLRRCKGSLRPNGIIVIKDNMAQEGV--ILDD---------VDSSVCRDLDVVRRIICS-AGLSLLAEER 224 (241)
T ss_dssp GGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEBSSSE--EEET---------TTTEEEEBHHHHHHHHHH-TTCCEEEEEE
T ss_pred hhCCHHHHHHHHHHHHHhcCCCeEEEEEEccCCCcc--eecc---------cCCcccCCHHHHHHHHHH-cCCeEEEeee
Confidence 999987678999999999999999999876654311 0000 011123478888888887 8999988876
Q ss_pred c
Q 035870 787 I 787 (842)
Q Consensus 787 ~ 787 (842)
.
T Consensus 225 ~ 225 (241)
T 2ex4_A 225 Q 225 (241)
T ss_dssp C
T ss_pred c
Confidence 4
No 70
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.72 E-value=3.6e-17 Score=179.40 Aligned_cols=154 Identities=18% Similarity=0.148 Sum_probs=119.3
Q ss_pred CCCCCeEEEeccCchHHHHHHHHh--cCCEEEEEcCCHHHHHHHHHHHHHc-----C-C-CCCeEEEEccccCC------
Q 035870 627 VSKGQEVLEIGCGWGTLAIEIVKR--TGCKYTGITLSEEQLKYAEMKVKEA-----G-L-QDLIRLYLCDYRQL------ 691 (842)
Q Consensus 627 ~~~~~~vLDiGcG~G~~~~~la~~--~~~~v~gid~s~~~~~~a~~~~~~~-----~-l-~~~v~~~~~d~~~~------ 691 (842)
+.++.+|||||||+|.++..+++. ++.+|+|+|+|+.+++.|+++++.. | + ..+++++++|+.++
T Consensus 81 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~ 160 (383)
T 4fsd_A 81 SLEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPE 160 (383)
T ss_dssp GGTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSC
T ss_pred CCCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccC
Confidence 568899999999999999999987 4679999999999999999998765 3 2 24899999999886
Q ss_pred c-cCCCccEEEEcchhhhcChhhHHHHHHHHHhccccCcEEEEEeecCCCcccccccCccchhhhcccCCCCCCCHHHHH
Q 035870 692 A-KANKYDRIISCEMIEAVGHEFMEEFFGCCESLLAEDGLLVLQFISIPDERYNEYRLSSDFIKEYIFPGGCLPSLSRIT 770 (842)
Q Consensus 692 ~-~~~~fD~i~s~~~~~~~~~~~~~~~~~~~~~~LkpgG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~ 770 (842)
+ ++++||+|+++.+++|+++ +..++++++++|||||++++.++............ ... .+........+..++.
T Consensus 161 ~~~~~~fD~V~~~~~l~~~~d--~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~ 235 (383)
T 4fsd_A 161 GVPDSSVDIVISNCVCNLSTN--KLALFKEIHRVLRDGGELYFSDVYADRRLSEAAQQ-DPI--LYGECLGGALYLEDFR 235 (383)
T ss_dssp CCCTTCEEEEEEESCGGGCSC--HHHHHHHHHHHEEEEEEEEEEEEEESSCCCHHHHH-CHH--HHHTTCTTCCBHHHHH
T ss_pred CCCCCCEEEEEEccchhcCCC--HHHHHHHHHHHcCCCCEEEEEEeccccccCHhHhh-hHH--HhhcccccCCCHHHHH
Confidence 5 5689999999999999977 89999999999999999999877654322111111 111 1112223456778888
Q ss_pred HHHhhcCCcEEEEEEe
Q 035870 771 SAMSVASRLCVEQVEN 786 (842)
Q Consensus 771 ~~~~~~~gf~v~~~~~ 786 (842)
+.+.+ +||++..+..
T Consensus 236 ~ll~~-aGF~~v~~~~ 250 (383)
T 4fsd_A 236 RLVAE-AGFRDVRLVS 250 (383)
T ss_dssp HHHHH-TTCCCEEEEE
T ss_pred HHHHH-CCCceEEEEe
Confidence 88887 8997665544
No 71
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.71 E-value=2.2e-17 Score=169.41 Aligned_cols=167 Identities=11% Similarity=0.151 Sum_probs=126.2
Q ss_pred hhhcccCchHHhhhhhhhhhcCChHHHHhccCCCCcccccccCC-CcccHHHHHHHHHHHHHHHcCCCCCCeEEEeccCc
Q 035870 562 RHISRQNTLTQARRNISRHYDLSNELFSLFLDESMTYSCAVFKS-EDEDLKAAQMRKVSLLIEKARVSKGQEVLEIGCGW 640 (842)
Q Consensus 562 ~~~~~~~~~~~~~~~i~~~Yd~~~~~~~~~l~~~~~ys~~~~~~-~~~~l~~aq~~~~~~l~~~l~~~~~~~vLDiGcG~ 640 (842)
.+++...+.+.-.+.+...|+...++|+..+...+..+..-+.. ..-...+...+..+.-...+.++++++|||||||+
T Consensus 54 ~~vl~~~~~~~l~~~~~~~y~~~~~~~E~~wa~~l~~~~~p~~~l~~fpy~~~~~~l~~~E~~la~l~~g~rVLDIGcG~ 133 (298)
T 3fpf_A 54 KHILDDAEMNHALSLIRKFYVNLGMKLEMEKAQEVIESDSPWETLRSFYFYPRYLELLKNEAALGRFRRGERAVFIGGGP 133 (298)
T ss_dssp HHHHHCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSHHHHHHTSTTHHHHHHHHHHHHHHTTCCTTCEEEEECCCS
T ss_pred HHHhcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCChHHhhccCCCcccHHHHHHHHHHHcCCCCcCEEEEECCCc
Confidence 34445566777788899999999999988777655333210000 00011122233333334567889999999999999
Q ss_pred hHHH-HHHHHhcCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCccCCCccEEEEcchhhhcChhhHHHHHH
Q 035870 641 GTLA-IEIVKRTGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLAKANKYDRIISCEMIEAVGHEFMEEFFG 719 (842)
Q Consensus 641 G~~~-~~la~~~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~~~fD~i~s~~~~~~~~~~~~~~~~~ 719 (842)
|.++ ..+|+.++++|+|+|+|++|++.|++++++.|+ ++++++++|+.+++ +++||+|++... +++ ...+++
T Consensus 134 G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl-~~v~~v~gDa~~l~-d~~FDvV~~~a~---~~d--~~~~l~ 206 (298)
T 3fpf_A 134 LPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGV-DGVNVITGDETVID-GLEFDVLMVAAL---AEP--KRRVFR 206 (298)
T ss_dssp SCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTC-CSEEEEESCGGGGG-GCCCSEEEECTT---CSC--HHHHHH
T ss_pred cHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCC-CCeEEEECchhhCC-CCCcCEEEECCC---ccC--HHHHHH
Confidence 9766 555665799999999999999999999999999 79999999999886 689999998654 333 789999
Q ss_pred HHHhccccCcEEEEEe
Q 035870 720 CCESLLAEDGLLVLQF 735 (842)
Q Consensus 720 ~~~~~LkpgG~~~~~~ 735 (842)
++.++|||||++++..
T Consensus 207 el~r~LkPGG~Lvv~~ 222 (298)
T 3fpf_A 207 NIHRYVDTETRIIYRT 222 (298)
T ss_dssp HHHHHCCTTCEEEEEE
T ss_pred HHHHHcCCCcEEEEEc
Confidence 9999999999999965
No 72
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.71 E-value=1.5e-17 Score=173.14 Aligned_cols=171 Identities=18% Similarity=0.204 Sum_probs=123.2
Q ss_pred CCCCCCeEEEeccCchHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCc-cCCCccEEEEcc
Q 035870 626 RVSKGQEVLEIGCGWGTLAIEIVKRTGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLA-KANKYDRIISCE 704 (842)
Q Consensus 626 ~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~-~~~~fD~i~s~~ 704 (842)
.+.++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.+++++ . +...+++++++|+.+++ ++++||+|++..
T Consensus 36 ~~~~~~~vLDiG~G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~-~-~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~ 112 (263)
T 2yqz_A 36 PKGEEPVFLELGVGTGRIALPLIAR-GYRYIALDADAAMLEVFRQKI-A-GVDRKVQVVQADARAIPLPDESVHGVIVVH 112 (263)
T ss_dssp CSSSCCEEEEETCTTSTTHHHHHTT-TCEEEEEESCHHHHHHHHHHT-T-TSCTTEEEEESCTTSCCSCTTCEEEEEEES
T ss_pred CCCCCCEEEEeCCcCCHHHHHHHHC-CCEEEEEECCHHHHHHHHHHh-h-ccCCceEEEEcccccCCCCCCCeeEEEECC
Confidence 5678899999999999999999987 889999999999999999987 2 33358999999999887 678999999999
Q ss_pred hhhhcChhhHHHHHHHHHhccccCcEEEEEeecCCC-cccccc-cCccchhhhcccC---CCCCCCHHHHHHHHhhcCCc
Q 035870 705 MIEAVGHEFMEEFFGCCESLLAEDGLLVLQFISIPD-ERYNEY-RLSSDFIKEYIFP---GGCLPSLSRITSAMSVASRL 779 (842)
Q Consensus 705 ~~~~~~~~~~~~~~~~~~~~LkpgG~~~~~~~~~~~-~~~~~~-~~~~~~~~~~i~p---~~~~~~~~~~~~~~~~~~gf 779 (842)
+++|+++ ...+++++.++|||||++++. +..++ ...... .....+....-+| ....++..++.+.+.+ +||
T Consensus 113 ~l~~~~~--~~~~l~~~~~~L~pgG~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gf 188 (263)
T 2yqz_A 113 LWHLVPD--WPKVLAEAIRVLKPGGALLEG-WDQAEASPEWTLQERWRAFAAEEGFPVERGLHAKRLKEVEEALRR-LGL 188 (263)
T ss_dssp CGGGCTT--HHHHHHHHHHHEEEEEEEEEE-EEEECCCHHHHHHHHHHHHHHHHTCCCCCCHHHHHHHHHHHHHHH-TTC
T ss_pred chhhcCC--HHHHHHHHHHHCCCCcEEEEE-ecCCCccHHHHHHHHHHHHHHHhCCCcccccccCCHHHHHHHHHH-cCC
Confidence 9999986 789999999999999999987 32221 110000 0011112222122 1123467777777776 899
Q ss_pred EEEEEEecCccHHHHHHHHHHHHH
Q 035870 780 CVEQVENIGIHYYQTLRCWRKNFM 803 (842)
Q Consensus 780 ~v~~~~~~~~~y~~tl~~w~~~~~ 803 (842)
+++..+.....+..+...+.+.+.
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~ 212 (263)
T 2yqz_A 189 KPRTREVARWREERTPREALEALS 212 (263)
T ss_dssp CCEEEEEEEEEEEECHHHHHHHHH
T ss_pred CcceEEEeeeecCCCHHHHHHHHH
Confidence 987765544433334455544443
No 73
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.71 E-value=5.9e-17 Score=167.07 Aligned_cols=159 Identities=18% Similarity=0.195 Sum_probs=119.8
Q ss_pred HHHHHcC-CCCCCeEEEeccCchHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCccCCCcc
Q 035870 620 LLIEKAR-VSKGQEVLEIGCGWGTLAIEIVKRTGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLAKANKYD 698 (842)
Q Consensus 620 ~l~~~l~-~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~~~fD 698 (842)
.+++.+. ..++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.|+++... +++++++|+.++.++++||
T Consensus 32 ~~~~~l~~~~~~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~~~~-----~v~~~~~d~~~~~~~~~fD 105 (250)
T 2p7i_A 32 FMVRAFTPFFRPGNLLELGSFKGDFTSRLQEH-FNDITCVEASEEAISHAQGRLKD-----GITYIHSRFEDAQLPRRYD 105 (250)
T ss_dssp HHHHHHGGGCCSSCEEEESCTTSHHHHHHTTT-CSCEEEEESCHHHHHHHHHHSCS-----CEEEEESCGGGCCCSSCEE
T ss_pred HHHHHHHhhcCCCcEEEECCCCCHHHHHHHHh-CCcEEEEeCCHHHHHHHHHhhhC-----CeEEEEccHHHcCcCCccc
Confidence 3344333 347789999999999999999987 67999999999999999988532 6999999998887678999
Q ss_pred EEEEcchhhhcChhhHHHHHHHHH-hccccCcEEEEEeecCCCccccc------ccCccchhhhc-ccCCCCCCCHHHHH
Q 035870 699 RIISCEMIEAVGHEFMEEFFGCCE-SLLAEDGLLVLQFISIPDERYNE------YRLSSDFIKEY-IFPGGCLPSLSRIT 770 (842)
Q Consensus 699 ~i~s~~~~~~~~~~~~~~~~~~~~-~~LkpgG~~~~~~~~~~~~~~~~------~~~~~~~~~~~-i~p~~~~~~~~~~~ 770 (842)
+|++..+++|+++ +..++++++ ++|||||++++.+.......... ......+.... ...+....+..++.
T Consensus 106 ~v~~~~~l~~~~~--~~~~l~~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (250)
T 2p7i_A 106 NIVLTHVLEHIDD--PVALLKRINDDWLAEGGRLFLVCPNANAVSRQIAVKMGIISHNSAVTEAEFAHGHRCTYALDTLE 183 (250)
T ss_dssp EEEEESCGGGCSS--HHHHHHHHHHTTEEEEEEEEEEEECTTCHHHHHHHHTTSSSSTTCCCHHHHHTTCCCCCCHHHHH
T ss_pred EEEEhhHHHhhcC--HHHHHHHHHHHhcCCCCEEEEEcCChHHHHHHHHHHcCccccchhcccccccccccccCCHHHHH
Confidence 9999999999976 789999999 99999999999876544221100 00000000000 11223456889998
Q ss_pred HHHhhcCCcEEEEEEec
Q 035870 771 SAMSVASRLCVEQVENI 787 (842)
Q Consensus 771 ~~~~~~~gf~v~~~~~~ 787 (842)
+.+.+ +||+++..+.+
T Consensus 184 ~~l~~-~Gf~~~~~~~~ 199 (250)
T 2p7i_A 184 RDASR-AGLQVTYRSGI 199 (250)
T ss_dssp HHHHH-TTCEEEEEEEE
T ss_pred HHHHH-CCCeEEEEeee
Confidence 88877 89999988754
No 74
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.70 E-value=3.2e-16 Score=160.78 Aligned_cols=148 Identities=16% Similarity=0.192 Sum_probs=118.0
Q ss_pred CCCCCeEEEeccCchHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCc-cCCCccEEEEcch
Q 035870 627 VSKGQEVLEIGCGWGTLAIEIVKRTGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLA-KANKYDRIISCEM 705 (842)
Q Consensus 627 ~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~-~~~~fD~i~s~~~ 705 (842)
++++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.++++. ...+++++++|+.+++ ++++||+|++..+
T Consensus 51 ~~~~~~vLDiG~G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~----~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~ 125 (242)
T 3l8d_A 51 VKKEAEVLDVGCGDGYGTYKLSRT-GYKAVGVDISEVMIQKGKERG----EGPDLSFIKGDLSSLPFENEQFEAIMAINS 125 (242)
T ss_dssp SCTTCEEEEETCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHTTT----CBTTEEEEECBTTBCSSCTTCEEEEEEESC
T ss_pred cCCCCeEEEEcCCCCHHHHHHHHc-CCeEEEEECCHHHHHHHHhhc----ccCCceEEEcchhcCCCCCCCccEEEEcCh
Confidence 357889999999999999999998 889999999999999999874 2247999999999988 6789999999999
Q ss_pred hhhcChhhHHHHHHHHHhccccCcEEEEEeecCCCcccccccCccchhhhccc-CCCCCCCHHHHHHHHhhcCCcEEEEE
Q 035870 706 IEAVGHEFMEEFFGCCESLLAEDGLLVLQFISIPDERYNEYRLSSDFIKEYIF-PGGCLPSLSRITSAMSVASRLCVEQV 784 (842)
Q Consensus 706 ~~~~~~~~~~~~~~~~~~~LkpgG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-p~~~~~~~~~~~~~~~~~~gf~v~~~ 784 (842)
++|+++ +..++++++++|||||++++.+......... ..+...+-. ......+..++.+.+.+ +||++++.
T Consensus 126 l~~~~~--~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gf~~~~~ 197 (242)
T 3l8d_A 126 LEWTEE--PLRALNEIKRVLKSDGYACIAILGPTAKPRE-----NSYPRLYGKDVVCNTMMPWEFEQLVKE-QGFKVVDG 197 (242)
T ss_dssp TTSSSC--HHHHHHHHHHHEEEEEEEEEEEECTTCGGGG-----GGGGGGGTCCCSSCCCCHHHHHHHHHH-TTEEEEEE
T ss_pred HhhccC--HHHHHHHHHHHhCCCeEEEEEEcCCcchhhh-----hhhhhhccccccccCCCHHHHHHHHHH-cCCEEEEe
Confidence 999976 7899999999999999999988654432211 111111111 12344678888887776 89999887
Q ss_pred Eec
Q 035870 785 ENI 787 (842)
Q Consensus 785 ~~~ 787 (842)
..+
T Consensus 198 ~~~ 200 (242)
T 3l8d_A 198 IGV 200 (242)
T ss_dssp EEE
T ss_pred ecc
Confidence 754
No 75
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.69 E-value=5.2e-16 Score=153.93 Aligned_cols=151 Identities=12% Similarity=0.098 Sum_probs=121.0
Q ss_pred HHHHHcCCCCCCeEEEeccCchHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCccCCCccE
Q 035870 620 LLIEKARVSKGQEVLEIGCGWGTLAIEIVKRTGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLAKANKYDR 699 (842)
Q Consensus 620 ~l~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~~~fD~ 699 (842)
.+++.+...++.+|||||||+|.++..+++. +.+|+++|+|+.+++.+++++...+++ +++++++|+.+++.+++||+
T Consensus 23 ~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~-~~~~~~~d~~~~~~~~~~D~ 100 (199)
T 2xvm_A 23 EVLEAVKVVKPGKTLDLGCGNGRNSLYLAAN-GYDVDAWDKNAMSIANVERIKSIENLD-NLHTRVVDLNNLTFDRQYDF 100 (199)
T ss_dssp HHHHHTTTSCSCEEEEETCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHTCT-TEEEEECCGGGCCCCCCEEE
T ss_pred HHHHHhhccCCCeEEEEcCCCCHHHHHHHHC-CCeEEEEECCHHHHHHHHHHHHhCCCC-CcEEEEcchhhCCCCCCceE
Confidence 4556666678889999999999999999998 889999999999999999999888875 69999999988765679999
Q ss_pred EEEcchhhhcChhhHHHHHHHHHhccccCcEEEEEeecCCCcccccccCccchhhhcccCCCCCCCHHHHHHHHhhcCCc
Q 035870 700 IISCEMIEAVGHEFMEEFFGCCESLLAEDGLLVLQFISIPDERYNEYRLSSDFIKEYIFPGGCLPSLSRITSAMSVASRL 779 (842)
Q Consensus 700 i~s~~~~~~~~~~~~~~~~~~~~~~LkpgG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~gf 779 (842)
|+++.+++|++.+....+++++.++|||||++++.+...+.... .. .+.....+.+++.+.+.+ |
T Consensus 101 v~~~~~l~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~----~~--------~~~~~~~~~~~l~~~~~~---f 165 (199)
T 2xvm_A 101 ILSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVAAMDTADYP----CT--------VGFPFAFKEGELRRYYEG---W 165 (199)
T ss_dssp EEEESCGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEEBCCSSSC----CC--------SCCSCCBCTTHHHHHTTT---S
T ss_pred EEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEeeccCCcC----CC--------CCCCCccCHHHHHHHhcC---C
Confidence 99999999999777999999999999999998886554433210 00 111233467777766542 8
Q ss_pred EEEEEEec
Q 035870 780 CVEQVENI 787 (842)
Q Consensus 780 ~v~~~~~~ 787 (842)
+++..+..
T Consensus 166 ~~~~~~~~ 173 (199)
T 2xvm_A 166 ERVKYNED 173 (199)
T ss_dssp EEEEEECC
T ss_pred eEEEeccc
Confidence 88877653
No 76
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.69 E-value=1.8e-16 Score=171.12 Aligned_cols=171 Identities=13% Similarity=0.181 Sum_probs=136.7
Q ss_pred HHHHHHHHcCC--CCCCeEEEeccCchHHHHHHHHh-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCcc
Q 035870 617 KVSLLIEKARV--SKGQEVLEIGCGWGTLAIEIVKR-TGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLAK 693 (842)
Q Consensus 617 ~~~~l~~~l~~--~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~ 693 (842)
....+++.+.. .++.+|||||||+|.++..+++. ++.+++++|+| .+++.|++++...++.++++++.+|+.+.+.
T Consensus 151 ~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~ 229 (335)
T 2r3s_A 151 PAQLIAQLVNENKIEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVLEVAKENARIQGVASRYHTIAGSAFEVDY 229 (335)
T ss_dssp HHHHHHHHHTC--CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHHHHHHHHHHHHTCGGGEEEEESCTTTSCC
T ss_pred hHHHHHHhcccccCCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHHHHHHHHHHhcCCCcceEEEecccccCCC
Confidence 34566777777 78899999999999999999988 57899999999 9999999999998888789999999987663
Q ss_pred CCCccEEEEcchhhhcChhhHHHHHHHHHhccccCcEEEEEeecCCCccccc-ccCccchhhhcccCCCCCCCHHHHHHH
Q 035870 694 ANKYDRIISCEMIEAVGHEFMEEFFGCCESLLAEDGLLVLQFISIPDERYNE-YRLSSDFIKEYIFPGGCLPSLSRITSA 772 (842)
Q Consensus 694 ~~~fD~i~s~~~~~~~~~~~~~~~~~~~~~~LkpgG~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~p~~~~~~~~~~~~~ 772 (842)
.+.||+|++..+++|++++....++++++++|||||++++.+...++..... .....++......+++...+.+++.+.
T Consensus 230 ~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~l 309 (335)
T 2r3s_A 230 GNDYDLVLLPNFLHHFDVATCEQLLRKIKTALAVEGKVIVFDFIPNSDRITPPDAAAFSLVMLATTPNGDAYTFAEYESM 309 (335)
T ss_dssp CSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCCCTTSSCSHHHHHHHHHHHHHSSSCCCCCHHHHHHH
T ss_pred CCCCcEEEEcchhccCCHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCcCCchHHHHHHHHHHeeCCCCCcCCHHHHHHH
Confidence 3459999999999999887789999999999999999999887765432111 111111111222356778899999988
Q ss_pred HhhcCCcEEEEEEecCc
Q 035870 773 MSVASRLCVEQVENIGI 789 (842)
Q Consensus 773 ~~~~~gf~v~~~~~~~~ 789 (842)
+.+ +||++.++..+..
T Consensus 310 l~~-aGf~~~~~~~~~~ 325 (335)
T 2r3s_A 310 FSN-AGFSHSQLHSLPT 325 (335)
T ss_dssp HHH-TTCSEEEEECCTT
T ss_pred HHH-CCCCeeeEEECCC
Confidence 887 8999988877643
No 77
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.69 E-value=3.2e-16 Score=160.56 Aligned_cols=146 Identities=18% Similarity=0.231 Sum_probs=114.3
Q ss_pred CCCCCCeEEEeccCchHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHH----------cC------CCCCeEEEEcccc
Q 035870 626 RVSKGQEVLEIGCGWGTLAIEIVKRTGCKYTGITLSEEQLKYAEMKVKE----------AG------LQDLIRLYLCDYR 689 (842)
Q Consensus 626 ~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~----------~~------l~~~v~~~~~d~~ 689 (842)
...++.+|||+|||+|..+..+|+. |.+|+|||+|+.+++.|+++... .+ ...+++++++|+.
T Consensus 65 ~~~~~~~vLD~GCG~G~~~~~La~~-G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~ 143 (252)
T 2gb4_A 65 KGQSGLRVFFPLCGKAIEMKWFADR-GHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIF 143 (252)
T ss_dssp TTCCSCEEEETTCTTCTHHHHHHHT-TCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTT
T ss_pred cCCCCCeEEEeCCCCcHHHHHHHHC-CCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECccc
Confidence 3467889999999999999999998 88999999999999999877531 00 1247999999999
Q ss_pred CCcc-C-CCccEEEEcchhhhcChhhHHHHHHHHHhccccCcEEEEEeecCCCcccccccCccchhhhcccCCCCCCCHH
Q 035870 690 QLAK-A-NKYDRIISCEMIEAVGHEFMEEFFGCCESLLAEDGLLVLQFISIPDERYNEYRLSSDFIKEYIFPGGCLPSLS 767 (842)
Q Consensus 690 ~~~~-~-~~fD~i~s~~~~~~~~~~~~~~~~~~~~~~LkpgG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~ 767 (842)
+++. + ++||+|++..+++|++.+....+++++.++|||||++++.++....... . .|. ...+.+
T Consensus 144 ~l~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~~~~~~~~~~----~---------g~~-~~~~~~ 209 (252)
T 2gb4_A 144 DLPRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVAVLSYDPTKH----A---------GPP-FYVPSA 209 (252)
T ss_dssp TGGGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEEEECCTTSC----C---------CSS-CCCCHH
T ss_pred cCCcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEEEEecCCccC----C---------CCC-CCCCHH
Confidence 9883 2 8999999999999999878889999999999999999876554332110 0 010 124778
Q ss_pred HHHHHHhhcCCcEEEEEEecC
Q 035870 768 RITSAMSVASRLCVEQVENIG 788 (842)
Q Consensus 768 ~~~~~~~~~~gf~v~~~~~~~ 788 (842)
++.+.+.. +|+++..+...
T Consensus 210 el~~~l~~--~f~v~~~~~~~ 228 (252)
T 2gb4_A 210 ELKRLFGT--KCSMQCLEEVD 228 (252)
T ss_dssp HHHHHHTT--TEEEEEEEEEE
T ss_pred HHHHHhhC--CeEEEEEeccc
Confidence 88877764 59998877643
No 78
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.69 E-value=3.3e-16 Score=161.86 Aligned_cols=165 Identities=15% Similarity=0.176 Sum_probs=122.9
Q ss_pred HHHHHHcCCCCCCeEEEeccCchHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCc-cCCCc
Q 035870 619 SLLIEKARVSKGQEVLEIGCGWGTLAIEIVKRTGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLA-KANKY 697 (842)
Q Consensus 619 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~-~~~~f 697 (842)
..+.+.+...++.+|||||||+|.++..+++....+|+|+|+|+++++.|+++.. ..+++++++|+.+++ ++++|
T Consensus 34 ~~l~~~~~~~~~~~vLD~GcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~----~~~~~~~~~d~~~~~~~~~~f 109 (253)
T 3g5l_A 34 HELKKMLPDFNQKTVLDLGCGFGWHCIYAAEHGAKKVLGIDLSERMLTEAKRKTT----SPVVCYEQKAIEDIAIEPDAY 109 (253)
T ss_dssp HHHHTTCCCCTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHCC----CTTEEEEECCGGGCCCCTTCE
T ss_pred HHHHHhhhccCCCEEEEECCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHhhc----cCCeEEEEcchhhCCCCCCCe
Confidence 4566667767899999999999999999999833399999999999999998865 348999999999988 67899
Q ss_pred cEEEEcchhhhcChhhHHHHHHHHHhccccCcEEEEEeecCCCc------c-cccccCccch-hhhcccC----------
Q 035870 698 DRIISCEMIEAVGHEFMEEFFGCCESLLAEDGLLVLQFISIPDE------R-YNEYRLSSDF-IKEYIFP---------- 759 (842)
Q Consensus 698 D~i~s~~~~~~~~~~~~~~~~~~~~~~LkpgG~~~~~~~~~~~~------~-~~~~~~~~~~-~~~~i~p---------- 759 (842)
|+|++..+++|+.+ +..++++++++|||||++++........ + +........+ +..|...
T Consensus 110 D~v~~~~~l~~~~~--~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (253)
T 3g5l_A 110 NVVLSSLALHYIAS--FDDICKKVYINLKSSGSFIFSVEHPVFTADGRQDWYTDETGNKLHWPVDRYFNESMRTSHFLGE 187 (253)
T ss_dssp EEEEEESCGGGCSC--HHHHHHHHHHHEEEEEEEEEEEECHHHHSSSSCSCEECSSCCEEEEEECCTTCCCEEEEEETTE
T ss_pred EEEEEchhhhhhhh--HHHHHHHHHHHcCCCcEEEEEeCCCccccCccccceeccCCceEEEEeccccccceEEEeeccc
Confidence 99999999999965 8999999999999999999975432100 0 0000000000 0011000
Q ss_pred --CCCCCCHHHHHHHHhhcCCcEEEEEEecCcc
Q 035870 760 --GGCLPSLSRITSAMSVASRLCVEQVENIGIH 790 (842)
Q Consensus 760 --~~~~~~~~~~~~~~~~~~gf~v~~~~~~~~~ 790 (842)
.....+.+++.+.+.+ +||+++.+.+..+.
T Consensus 188 ~~~~~~~t~~~~~~~l~~-aGF~~~~~~e~~~~ 219 (253)
T 3g5l_A 188 DVQKYHRTVTTYIQTLLK-NGFQINSVIEPEPA 219 (253)
T ss_dssp EEEEECCCHHHHHHHHHH-TTEEEEEEECCCCC
T ss_pred cCccEecCHHHHHHHHHH-cCCeeeeeecCCCc
Confidence 0112388999988887 89999999876543
No 79
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.69 E-value=1.7e-16 Score=164.59 Aligned_cols=161 Identities=17% Similarity=0.154 Sum_probs=122.9
Q ss_pred HHHHHHHHHcCCCCCCeEEEeccCchHHHHHHHHh-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCccC
Q 035870 616 RKVSLLIEKARVSKGQEVLEIGCGWGTLAIEIVKR-TGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLAKA 694 (842)
Q Consensus 616 ~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~ 694 (842)
+....+++.+...++.+|||||||+|.++..+++. ++.+|+|+|+|+.+++.++++. .+++++++|+.+++++
T Consensus 20 ~~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~------~~~~~~~~d~~~~~~~ 93 (259)
T 2p35_A 20 RPARDLLAQVPLERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADRL------PNTNFGKADLATWKPA 93 (259)
T ss_dssp HHHHHHHTTCCCSCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHHS------TTSEEEECCTTTCCCS
T ss_pred HHHHHHHHhcCCCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhC------CCcEEEECChhhcCcc
Confidence 44457788888888999999999999999999988 5789999999999999999871 3799999999988766
Q ss_pred CCccEEEEcchhhhcChhhHHHHHHHHHhccccCcEEEEEeecCCCccccc----ccCccchhhhcc---cCCCCCCCHH
Q 035870 695 NKYDRIISCEMIEAVGHEFMEEFFGCCESLLAEDGLLVLQFISIPDERYNE----YRLSSDFIKEYI---FPGGCLPSLS 767 (842)
Q Consensus 695 ~~fD~i~s~~~~~~~~~~~~~~~~~~~~~~LkpgG~~~~~~~~~~~~~~~~----~~~~~~~~~~~i---~p~~~~~~~~ 767 (842)
++||+|+++.+++|+++ +..++++++++|||||++++............ ......|..... .+...+++..
T Consensus 94 ~~fD~v~~~~~l~~~~~--~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (259)
T 2p35_A 94 QKADLLYANAVFQWVPD--HLAVLSQLMDQLESGGVLAVQMPDNLQEPTHIAMHETADGGPWKDAFSGGGLRRKPLPPPS 171 (259)
T ss_dssp SCEEEEEEESCGGGSTT--HHHHHHHHGGGEEEEEEEEEEEECCTTSHHHHHHHHHHHHSTTGGGC-------CCCCCHH
T ss_pred CCcCEEEEeCchhhCCC--HHHHHHHHHHhcCCCeEEEEEeCCCCCcHHHHHHHHHhcCcchHHHhccccccccCCCCHH
Confidence 89999999999999976 89999999999999999999876433221110 000011211110 1133567889
Q ss_pred HHHHHHhhcCCcEEEEEE
Q 035870 768 RITSAMSVASRLCVEQVE 785 (842)
Q Consensus 768 ~~~~~~~~~~gf~v~~~~ 785 (842)
++.+.+.+ +||++...+
T Consensus 172 ~~~~~l~~-aGf~v~~~~ 188 (259)
T 2p35_A 172 DYFNALSP-KSSRVDVWH 188 (259)
T ss_dssp HHHHHHGG-GEEEEEEEE
T ss_pred HHHHHHHh-cCCceEEEE
Confidence 99888887 899865444
No 80
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.68 E-value=2.4e-16 Score=165.44 Aligned_cols=157 Identities=17% Similarity=0.233 Sum_probs=121.4
Q ss_pred HHHHHcCCCCCCeEEEeccCchHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCccCCCccE
Q 035870 620 LLIEKARVSKGQEVLEIGCGWGTLAIEIVKRTGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLAKANKYDR 699 (842)
Q Consensus 620 ~l~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~~~fD~ 699 (842)
.+++.+.+.++.+|||||||+|.++..+++ ++.+|+|+|+|+.|++.++++. .+++++++|+.+++.+++||+
T Consensus 48 ~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~-~~~~v~gvD~s~~~~~~a~~~~------~~~~~~~~d~~~~~~~~~fD~ 120 (279)
T 3ccf_A 48 DLLQLLNPQPGEFILDLGCGTGQLTEKIAQ-SGAEVLGTDNAATMIEKARQNY------PHLHFDVADARNFRVDKPLDA 120 (279)
T ss_dssp HHHHHHCCCTTCEEEEETCTTSHHHHHHHH-TTCEEEEEESCHHHHHHHHHHC------TTSCEEECCTTTCCCSSCEEE
T ss_pred HHHHHhCCCCCCEEEEecCCCCHHHHHHHh-CCCeEEEEECCHHHHHHHHhhC------CCCEEEECChhhCCcCCCcCE
Confidence 566777788899999999999999999998 5899999999999999999875 378999999999886689999
Q ss_pred EEEcchhhhcChhhHHHHHHHHHhccccCcEEEEEeecCCCcccccccCccchhhhc------ccCCCCCCCHHHHHHHH
Q 035870 700 IISCEMIEAVGHEFMEEFFGCCESLLAEDGLLVLQFISIPDERYNEYRLSSDFIKEY------IFPGGCLPSLSRITSAM 773 (842)
Q Consensus 700 i~s~~~~~~~~~~~~~~~~~~~~~~LkpgG~~~~~~~~~~~~~~~~~~~~~~~~~~~------i~p~~~~~~~~~~~~~~ 773 (842)
|+++.+++|+++ +..++++++++|||||++++......... .........+.+. .......++..++.+.+
T Consensus 121 v~~~~~l~~~~d--~~~~l~~~~~~LkpgG~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 197 (279)
T 3ccf_A 121 VFSNAMLHWVKE--PEAAIASIHQALKSGGRFVAEFGGKGNIK-YILEALYNALETLGIHNPQALNPWYFPSIGEYVNIL 197 (279)
T ss_dssp EEEESCGGGCSC--HHHHHHHHHHHEEEEEEEEEEEECTTTTH-HHHHHHHHHHHHHTCCCGGGGCCCCCCCHHHHHHHH
T ss_pred EEEcchhhhCcC--HHHHHHHHHHhcCCCcEEEEEecCCcchH-HHHHHHHHHHHhcCCccccCcCceeCCCHHHHHHHH
Confidence 999999999976 88999999999999999999776543210 0000000011111 01112456888998888
Q ss_pred hhcCCcEEEEEEec
Q 035870 774 SVASRLCVEQVENI 787 (842)
Q Consensus 774 ~~~~gf~v~~~~~~ 787 (842)
.+ +||+++.++..
T Consensus 198 ~~-aGf~~~~~~~~ 210 (279)
T 3ccf_A 198 EK-QGFDVTYAALF 210 (279)
T ss_dssp HH-HTEEEEEEEEE
T ss_pred HH-cCCEEEEEEEe
Confidence 77 89999877654
No 81
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.68 E-value=2e-17 Score=178.70 Aligned_cols=178 Identities=21% Similarity=0.175 Sum_probs=139.2
Q ss_pred HHHHHHcCCCCCCeEEEeccCchHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCccCCCcc
Q 035870 619 SLLIEKARVSKGQEVLEIGCGWGTLAIEIVKRTGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLAKANKYD 698 (842)
Q Consensus 619 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~~~fD 698 (842)
+.+++.+...++.+|||||||+|.++..+++....+|+|+|+|+ +++.|+++++.+++.++++++++|+++++..++||
T Consensus 40 ~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~~~~D 118 (348)
T 2y1w_A 40 RAILQNHTDFKDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSLPEQVD 118 (348)
T ss_dssp HHHHHTGGGTTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSCEE
T ss_pred HHHHhccccCCcCEEEEcCCCccHHHHHHHhCCCCEEEEECCHH-HHHHHHHHHHHcCCCCcEEEEEcchhhCCCCCcee
Confidence 56677777788999999999999999999988456999999996 89999999999999889999999999987447899
Q ss_pred EEEEcchhhhcChhhHHHHHHHHHhccccCcEEEEEeecCCC------cccccccCccchhhhcccCCCCCCCHHHHHHH
Q 035870 699 RIISCEMIEAVGHEFMEEFFGCCESLLAEDGLLVLQFISIPD------ERYNEYRLSSDFIKEYIFPGGCLPSLSRITSA 772 (842)
Q Consensus 699 ~i~s~~~~~~~~~~~~~~~~~~~~~~LkpgG~~~~~~~~~~~------~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~ 772 (842)
+|+|..+++|+..+.....+.+++++|||||++++...+... ..+........|+...++|+..++++.++...
T Consensus 119 ~Ivs~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~i~~~~~~~~~~~~~~~w~~~~~~g~d~~~l~~~~~~ 198 (348)
T 2y1w_A 119 IIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPTIGDVHLAPFTDEQLYMEQFTKANFWYQPSFHGVDLSALRGAAVD 198 (348)
T ss_dssp EEEECCCBTTBTTTSHHHHHHHGGGGEEEEEEEESCEEEEEEEEECCHHHHHHHHHHHGGGCCSCBTTBCCGGGHHHHHH
T ss_pred EEEEeCchhcCChHHHHHHHHHHHhhcCCCeEEEEecCcEEEEEecchHHhhhhccccCcccccccCcccHHHhhhHHHh
Confidence 999999999998777888899999999999999975433211 11111111234555568999999988877532
Q ss_pred HhhcCCcEEEEEEecCccHHHHHHHHH
Q 035870 773 MSVASRLCVEQVENIGIHYYQTLRCWR 799 (842)
Q Consensus 773 ~~~~~gf~v~~~~~~~~~y~~tl~~w~ 799 (842)
......+.+.++++.+|.+++..|.
T Consensus 199 --~~f~~p~~d~~~~~~~~~~~~~~~~ 223 (348)
T 2y1w_A 199 --EYFRQPVVDTFDIRILMAKSVKYTV 223 (348)
T ss_dssp --HHHTSCEEECCCGGGBCBCCEEEEE
T ss_pred --hhccCCeEEeECCeeecCcceEEEE
Confidence 1123357778888888988877775
No 82
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.68 E-value=1.1e-16 Score=178.11 Aligned_cols=171 Identities=15% Similarity=0.145 Sum_probs=129.2
Q ss_pred CCCcccHHHHHHHHHHHHHHHcCCCCCCeEEEeccCchHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeE-
Q 035870 604 KSEDEDLKAAQMRKVSLLIEKARVSKGQEVLEIGCGWGTLAIEIVKRTGCKYTGITLSEEQLKYAEMKVKEAGLQDLIR- 682 (842)
Q Consensus 604 ~~~~~~l~~aq~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~- 682 (842)
......+.+.+.+..+.+++.+.++++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.|+++ +++....
T Consensus 82 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~VLDiGcG~G~~~~~l~~~-g~~v~gvD~s~~~~~~a~~~----~~~~~~~~ 156 (416)
T 4e2x_A 82 SSGSSVMREHFAMLARDFLATELTGPDPFIVEIGCNDGIMLRTIQEA-GVRHLGFEPSSGVAAKAREK----GIRVRTDF 156 (416)
T ss_dssp GGGCHHHHHHHHHHHHHHHHTTTCSSSCEEEEETCTTTTTHHHHHHT-TCEEEEECCCHHHHHHHHTT----TCCEECSC
T ss_pred CcCCHHHHHHHHHHHHHHHHHhCCCCCCEEEEecCCCCHHHHHHHHc-CCcEEEECCCHHHHHHHHHc----CCCcceee
Confidence 33445677777888899999999899999999999999999999987 88999999999999999876 3321111
Q ss_pred EEEccccCCc-cCCCccEEEEcchhhhcChhhHHHHHHHHHhccccCcEEEEEeecCCCcccccccCccchhhhcccCCC
Q 035870 683 LYLCDYRQLA-KANKYDRIISCEMIEAVGHEFMEEFFGCCESLLAEDGLLVLQFISIPDERYNEYRLSSDFIKEYIFPGG 761 (842)
Q Consensus 683 ~~~~d~~~~~-~~~~fD~i~s~~~~~~~~~~~~~~~~~~~~~~LkpgG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~ 761 (842)
+...+..+++ ++++||+|+++.+++|+++ +..++++++++|||||++++......... ....|. ....++.
T Consensus 157 ~~~~~~~~l~~~~~~fD~I~~~~vl~h~~d--~~~~l~~~~r~LkpgG~l~i~~~~~~~~~-----~~~~~~-~~~~~~~ 228 (416)
T 4e2x_A 157 FEKATADDVRRTEGPANVIYAANTLCHIPY--VQSVLEGVDALLAPDGVFVFEDPYLGDIV-----AKTSFD-QIFDEHF 228 (416)
T ss_dssp CSHHHHHHHHHHHCCEEEEEEESCGGGCTT--HHHHHHHHHHHEEEEEEEEEEEECHHHHH-----HHTCGG-GCSTTCC
T ss_pred echhhHhhcccCCCCEEEEEECChHHhcCC--HHHHHHHHHHHcCCCeEEEEEeCChHHhh-----hhcchh-hhhhhhh
Confidence 2233444454 4689999999999999986 89999999999999999999765432110 001111 1112344
Q ss_pred CCCCHHHHHHHHhhcCCcEEEEEEecC
Q 035870 762 CLPSLSRITSAMSVASRLCVEQVENIG 788 (842)
Q Consensus 762 ~~~~~~~~~~~~~~~~gf~v~~~~~~~ 788 (842)
.+++..++.+.+.+ +||++.+++.+.
T Consensus 229 ~~~s~~~l~~ll~~-aGf~~~~~~~~~ 254 (416)
T 4e2x_A 229 FLFSATSVQGMAQR-CGFELVDVQRLP 254 (416)
T ss_dssp EECCHHHHHHHHHH-TTEEEEEEEEEC
T ss_pred hcCCHHHHHHHHHH-cCCEEEEEEEcc
Confidence 56788999888877 899999988864
No 83
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.68 E-value=1.3e-15 Score=166.16 Aligned_cols=165 Identities=16% Similarity=0.151 Sum_probs=135.4
Q ss_pred HHHHHHHHcCCCCCCeEEEeccCchHHHHHHHHh-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCccCC
Q 035870 617 KVSLLIEKARVSKGQEVLEIGCGWGTLAIEIVKR-TGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLAKAN 695 (842)
Q Consensus 617 ~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~~ 695 (842)
....+++.+...++.+|||||||+|.++..+++. ++.+++++|+ +.+++.|++++...++.++|+++.+|+.+..+.
T Consensus 190 ~~~~l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~p~- 267 (369)
T 3gwz_A 190 EAGQVAAAYDFSGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLTGRGLADRCEILPGDFFETIPD- 267 (369)
T ss_dssp HHHHHHHHSCCTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTTCCCS-
T ss_pred hHHHHHHhCCCccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhhhcCcCCceEEeccCCCCCCCC-
Confidence 3466778888888899999999999999999988 6789999999 999999999999999888999999999832243
Q ss_pred CccEEEEcchhhhcChhhHHHHHHHHHhccccCcEEEEEeecCCCcccccccCccchhhhcccCCCCCCCHHHHHHHHhh
Q 035870 696 KYDRIISCEMIEAVGHEFMEEFFGCCESLLAEDGLLVLQFISIPDERYNEYRLSSDFIKEYIFPGGCLPSLSRITSAMSV 775 (842)
Q Consensus 696 ~fD~i~s~~~~~~~~~~~~~~~~~~~~~~LkpgG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~ 775 (842)
+||+|++..++++++++....++++++++|||||++++.+...++..... ....++ .....+++...+.+++.+.+++
T Consensus 268 ~~D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~-~~~~d~-~~~~~~~g~~~t~~e~~~ll~~ 345 (369)
T 3gwz_A 268 GADVYLIKHVLHDWDDDDVVRILRRIATAMKPDSRLLVIDNLIDERPAAS-TLFVDL-LLLVLVGGAERSESEFAALLEK 345 (369)
T ss_dssp SCSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEEBCCSSCCHH-HHHHHH-HHHHHHSCCCBCHHHHHHHHHT
T ss_pred CceEEEhhhhhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCc-hhHhhH-HHHhhcCCccCCHHHHHHHHHH
Confidence 89999999999999987777999999999999999999988776643221 100111 1123356778899999888887
Q ss_pred cCCcEEEEEEe
Q 035870 776 ASRLCVEQVEN 786 (842)
Q Consensus 776 ~~gf~v~~~~~ 786 (842)
+||+++++..
T Consensus 346 -aGf~~~~~~~ 355 (369)
T 3gwz_A 346 -SGLRVERSLP 355 (369)
T ss_dssp -TTEEEEEEEE
T ss_pred -CCCeEEEEEE
Confidence 8999998876
No 84
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.67 E-value=9.1e-17 Score=166.78 Aligned_cols=156 Identities=19% Similarity=0.215 Sum_probs=120.2
Q ss_pred HHHHHHHHHcCCCCCCeEEEeccCchHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCc-cC
Q 035870 616 RKVSLLIEKARVSKGQEVLEIGCGWGTLAIEIVKRTGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLA-KA 694 (842)
Q Consensus 616 ~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~-~~ 694 (842)
...+.+++.+...++.+|||||||+|.++..+++. +++|+|+|+|+.+++.++++. +++++++|+.+++ ++
T Consensus 21 ~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~~-------~~~~~~~d~~~~~~~~ 92 (261)
T 3ege_A 21 RIVNAIINLLNLPKGSVIADIGAGTGGYSVALANQ-GLFVYAVEPSIVMRQQAVVHP-------QVEWFTGYAENLALPD 92 (261)
T ss_dssp HHHHHHHHHHCCCTTCEEEEETCTTSHHHHHHHTT-TCEEEEECSCHHHHHSSCCCT-------TEEEECCCTTSCCSCT
T ss_pred HHHHHHHHHhCCCCCCEEEEEcCcccHHHHHHHhC-CCEEEEEeCCHHHHHHHHhcc-------CCEEEECchhhCCCCC
Confidence 34567778888889999999999999999999984 899999999999999887653 7999999999988 67
Q ss_pred CCccEEEEcchhhhcChhhHHHHHHHHHhccccCcEEEEEeecCCCcccccccCccchhhhccc-CCCCCCCHHHHHHHH
Q 035870 695 NKYDRIISCEMIEAVGHEFMEEFFGCCESLLAEDGLLVLQFISIPDERYNEYRLSSDFIKEYIF-PGGCLPSLSRITSAM 773 (842)
Q Consensus 695 ~~fD~i~s~~~~~~~~~~~~~~~~~~~~~~LkpgG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-p~~~~~~~~~~~~~~ 773 (842)
++||+|++..+++|+.+ +..++++++++|| ||++++.++..+... ..+. ..++..... .+..+++..++. .+
T Consensus 93 ~~fD~v~~~~~l~~~~~--~~~~l~~~~~~Lk-gG~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~-~l 165 (261)
T 3ege_A 93 KSVDGVISILAIHHFSH--LEKSFQEMQRIIR-DGTIVLLTFDIRLAQ-RIWL--YDYFPFLWEDALRFLPLDEQIN-LL 165 (261)
T ss_dssp TCBSEEEEESCGGGCSS--HHHHHHHHHHHBC-SSCEEEEEECGGGCC-CCGG--GGTCHHHHHHHHTSCCHHHHHH-HH
T ss_pred CCEeEEEEcchHhhccC--HHHHHHHHHHHhC-CcEEEEEEcCCchhH-HHHH--HHHHHHHhhhhhhhCCCHHHHH-HH
Confidence 89999999999999966 8999999999999 999988877543211 0000 011110000 113456777777 66
Q ss_pred hhcCCcEEEEEEec
Q 035870 774 SVASRLCVEQVENI 787 (842)
Q Consensus 774 ~~~~gf~v~~~~~~ 787 (842)
.+ +||+++..+.+
T Consensus 166 ~~-aGF~~v~~~~~ 178 (261)
T 3ege_A 166 QE-NTKRRVEAIPF 178 (261)
T ss_dssp HH-HHCSEEEEEEC
T ss_pred HH-cCCCceeEEEe
Confidence 65 89988887775
No 85
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.67 E-value=9.9e-17 Score=162.76 Aligned_cols=155 Identities=19% Similarity=0.250 Sum_probs=117.0
Q ss_pred HHHHHHcCCCCCCeEEEeccCchHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCC---c--c
Q 035870 619 SLLIEKARVSKGQEVLEIGCGWGTLAIEIVKRTGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQL---A--K 693 (842)
Q Consensus 619 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~---~--~ 693 (842)
..+++.+...++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.|+++ .++.+.+.|+.++ + .
T Consensus 42 ~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~~~~~~~~~~ 113 (227)
T 3e8s_A 42 QAILLAILGRQPERVLDLGCGEGWLLRALADR-GIEAVGVDGDRTLVDAARAA-------GAGEVHLASYAQLAEAKVPV 113 (227)
T ss_dssp HHHHHHHHHTCCSEEEEETCTTCHHHHHHHTT-TCEEEEEESCHHHHHHHHHT-------CSSCEEECCHHHHHTTCSCC
T ss_pred HHHHHHhhcCCCCEEEEeCCCCCHHHHHHHHC-CCEEEEEcCCHHHHHHHHHh-------cccccchhhHHhhccccccc
Confidence 45566666667799999999999999999998 88999999999999999987 2678899998776 3 4
Q ss_pred CCCccEEEEcchhhhcChhhHHHHHHHHHhccccCcEEEEEeecCCCcccccccCccchhhh-c-------ccCCCCCCC
Q 035870 694 ANKYDRIISCEMIEAVGHEFMEEFFGCCESLLAEDGLLVLQFISIPDERYNEYRLSSDFIKE-Y-------IFPGGCLPS 765 (842)
Q Consensus 694 ~~~fD~i~s~~~~~~~~~~~~~~~~~~~~~~LkpgG~~~~~~~~~~~~~~~~~~~~~~~~~~-~-------i~p~~~~~~ 765 (842)
.++||+|+++.+++ .. ++..++++++++|||||++++.+..........+. ..|... + ........+
T Consensus 114 ~~~fD~v~~~~~l~-~~--~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 188 (227)
T 3e8s_A 114 GKDYDLICANFALL-HQ--DIIELLSAMRTLLVPGGALVIQTLHPWSVADGDYQ--DGWREESFAGFAGDWQPMPWYFRT 188 (227)
T ss_dssp CCCEEEEEEESCCC-SS--CCHHHHHHHHHTEEEEEEEEEEECCTTTTCTTCCS--CEEEEECCTTSSSCCCCEEEEECC
T ss_pred CCCccEEEECchhh-hh--hHHHHHHHHHHHhCCCeEEEEEecCccccCccccc--cccchhhhhccccCcccceEEEec
Confidence 45699999999999 43 37899999999999999999988765432211111 111110 0 001113468
Q ss_pred HHHHHHHHhhcCCcEEEEEEec
Q 035870 766 LSRITSAMSVASRLCVEQVENI 787 (842)
Q Consensus 766 ~~~~~~~~~~~~gf~v~~~~~~ 787 (842)
.+++.+.+.+ +||++++++..
T Consensus 189 ~~~~~~~l~~-aGf~~~~~~~~ 209 (227)
T 3e8s_A 189 LASWLNALDM-AGLRLVSLQEP 209 (227)
T ss_dssp HHHHHHHHHH-TTEEEEEEECC
T ss_pred HHHHHHHHHH-cCCeEEEEecC
Confidence 9999988887 89999988763
No 86
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.67 E-value=6.7e-16 Score=166.23 Aligned_cols=164 Identities=14% Similarity=0.146 Sum_probs=131.3
Q ss_pred HHHHHHcCCCCCCeEEEeccCchHHHHHHHHh-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCccCCCc
Q 035870 619 SLLIEKARVSKGQEVLEIGCGWGTLAIEIVKR-TGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLAKANKY 697 (842)
Q Consensus 619 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~~~f 697 (842)
..+++.+...++.+|||||||+|.++..+++. ++.+++++|+ +.+++.|++++.+.++.++|+++.+|+.+..+ .+|
T Consensus 159 ~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~p-~~~ 236 (332)
T 3i53_A 159 TGIAAKYDWAALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRFLDTGLSGRAQVVVGSFFDPLP-AGA 236 (332)
T ss_dssp TTGGGSSCCGGGSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTSCCC-CSC
T ss_pred HHHHHhCCCCCCCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhhhhcCcCcCeEEecCCCCCCCC-CCC
Confidence 34555556667789999999999999999987 6789999999 99999999999999988899999999973223 389
Q ss_pred cEEEEcchhhhcChhhHHHHHHHHHhccccCcEEEEEeecCCCcccccccCccchhhhcccCCCCCCCHHHHHHHHhhcC
Q 035870 698 DRIISCEMIEAVGHEFMEEFFGCCESLLAEDGLLVLQFISIPDERYNEYRLSSDFIKEYIFPGGCLPSLSRITSAMSVAS 777 (842)
Q Consensus 698 D~i~s~~~~~~~~~~~~~~~~~~~~~~LkpgG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~ 777 (842)
|+|++..++||++++....++++++++|||||++++.+...++. ... ...++.. ....++...+.+++.+.+.+ +
T Consensus 237 D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~--~~~-~~~d~~~-~~~~~~~~~t~~e~~~ll~~-a 311 (332)
T 3i53_A 237 GGYVLSAVLHDWDDLSAVAILRRCAEAAGSGGVVLVIEAVAGDE--HAG-TGMDLRM-LTYFGGKERSLAELGELAAQ-A 311 (332)
T ss_dssp SEEEEESCGGGSCHHHHHHHHHHHHHHHTTTCEEEEEECCCC-----CC-HHHHHHH-HHHHSCCCCCHHHHHHHHHH-T
T ss_pred cEEEEehhhccCCHHHHHHHHHHHHHhcCCCCEEEEEeecCCCC--Ccc-HHHHHHH-HhhCCCCCCCHHHHHHHHHH-C
Confidence 99999999999999888999999999999999999988876654 110 0111111 12356777899999888887 8
Q ss_pred CcEEEEEEecCc
Q 035870 778 RLCVEQVENIGI 789 (842)
Q Consensus 778 gf~v~~~~~~~~ 789 (842)
||+++++...+.
T Consensus 312 Gf~~~~~~~~~~ 323 (332)
T 3i53_A 312 GLAVRAAHPISY 323 (332)
T ss_dssp TEEEEEEEECSS
T ss_pred CCEEEEEEECCC
Confidence 999998877653
No 87
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.67 E-value=2.7e-16 Score=165.28 Aligned_cols=164 Identities=18% Similarity=0.171 Sum_probs=122.1
Q ss_pred HHHHHHHc-CCCCCCeEEEeccCchHHHHHHHHh-c-CCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCccC
Q 035870 618 VSLLIEKA-RVSKGQEVLEIGCGWGTLAIEIVKR-T-GCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLAKA 694 (842)
Q Consensus 618 ~~~l~~~l-~~~~~~~vLDiGcG~G~~~~~la~~-~-~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~ 694 (842)
+..+++.+ .+.++.+|||||||+|.++..+++. + +++|+|+|+|+.+++.|++++...+. +++++++|+.+++.+
T Consensus 10 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~~~ 87 (284)
T 3gu3_A 10 VSFLVNTVWKITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPY--DSEFLEGDATEIELN 87 (284)
T ss_dssp HHHHHHTTSCCCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSS--EEEEEESCTTTCCCS
T ss_pred HHHHHHHHhccCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCC--ceEEEEcchhhcCcC
Confidence 34455544 5678899999999999999999987 3 58999999999999999999887664 799999999998855
Q ss_pred CCccEEEEcchhhhcChhhHHHHHHHHHhccccCcEEEEEeecCCC----cccc-----cccCccchhhh----cccCCC
Q 035870 695 NKYDRIISCEMIEAVGHEFMEEFFGCCESLLAEDGLLVLQFISIPD----ERYN-----EYRLSSDFIKE----YIFPGG 761 (842)
Q Consensus 695 ~~fD~i~s~~~~~~~~~~~~~~~~~~~~~~LkpgG~~~~~~~~~~~----~~~~-----~~~~~~~~~~~----~i~p~~ 761 (842)
++||+|++..+++|+++ +..++++++++|||||++++.+..... .... .......|... ....+.
T Consensus 88 ~~fD~v~~~~~l~~~~~--~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (284)
T 3gu3_A 88 DKYDIAICHAFLLHMTT--PETMLQKMIHSVKKGGKIICFEPHWISNMASYLLDGEKQSEFIQLGVLQKLFESDTQRNGK 165 (284)
T ss_dssp SCEEEEEEESCGGGCSS--HHHHHHHHHHTEEEEEEEEEEECCHHHHHHSEEETTSCHHHHCCHHHHHHHHHHHHHHTCC
T ss_pred CCeeEEEECChhhcCCC--HHHHHHHHHHHcCCCCEEEEEecchhcccccceecCcchhhccchHHHHHHHHHHhhhhcc
Confidence 79999999999999977 789999999999999999998765110 0000 00000111110 111234
Q ss_pred CCCCHHHHHHHHhhcCCcEEEEEEe
Q 035870 762 CLPSLSRITSAMSVASRLCVEQVEN 786 (842)
Q Consensus 762 ~~~~~~~~~~~~~~~~gf~v~~~~~ 786 (842)
..++..++.+.+++ +||+.+....
T Consensus 166 ~~~~~~~l~~~l~~-aGF~~v~~~~ 189 (284)
T 3gu3_A 166 DGNIGMKIPIYLSE-LGVKNIECRV 189 (284)
T ss_dssp CTTGGGTHHHHHHH-TTCEEEEEEE
T ss_pred cccHHHHHHHHHHH-cCCCeEEEEE
Confidence 45566677777776 8998876643
No 88
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.67 E-value=1.1e-16 Score=166.09 Aligned_cols=152 Identities=14% Similarity=0.104 Sum_probs=112.6
Q ss_pred CCCCCCeEEEeccCchHHHHHHHHhcCC-EEEEEcCCHHHHHHHHHHHHHcCC---------------------------
Q 035870 626 RVSKGQEVLEIGCGWGTLAIEIVKRTGC-KYTGITLSEEQLKYAEMKVKEAGL--------------------------- 677 (842)
Q Consensus 626 ~~~~~~~vLDiGcG~G~~~~~la~~~~~-~v~gid~s~~~~~~a~~~~~~~~l--------------------------- 677 (842)
...++.+|||||||+|.++..++.. ++ +|+|+|+|+.|++.|+++++....
T Consensus 52 ~~~~g~~vLDiGCG~G~~~~~~~~~-~~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~ 130 (263)
T 2a14_A 52 GGLQGDTLIDIGSGPTIYQVLAACD-SFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEK 130 (263)
T ss_dssp TSCCEEEEEESSCTTCCGGGTTGGG-TEEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHH
T ss_pred CCCCCceEEEeCCCccHHHHHHHHh-hhcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHH
Confidence 4568899999999999888777766 54 799999999999999988754320
Q ss_pred -CCCeE-EEEccccCC-c----cCCCccEEEEcchhhhcC--hhhHHHHHHHHHhccccCcEEEEEeecCCCcccccccC
Q 035870 678 -QDLIR-LYLCDYRQL-A----KANKYDRIISCEMIEAVG--HEFMEEFFGCCESLLAEDGLLVLQFISIPDERYNEYRL 748 (842)
Q Consensus 678 -~~~v~-~~~~d~~~~-~----~~~~fD~i~s~~~~~~~~--~~~~~~~~~~~~~~LkpgG~~~~~~~~~~~~~~~~~~~ 748 (842)
..++. ++++|+.+. + ..++||+|+++.++||+. .+++..++++++++|||||++++..+.... .+.
T Consensus 131 ~~~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~~~~~~-~~~---- 205 (263)
T 2a14_A 131 LRAAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTVTLRLP-SYM---- 205 (263)
T ss_dssp HHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCC-EEE----
T ss_pred HHhhhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEeecCc-cce----
Confidence 01244 899998874 2 246899999999999973 245789999999999999999998754322 111
Q ss_pred ccchhhhcccCCCCCCCHHHHHHHHhhcCCcEEEEEEecCc
Q 035870 749 SSDFIKEYIFPGGCLPSLSRITSAMSVASRLCVEQVENIGI 789 (842)
Q Consensus 749 ~~~~~~~~i~p~~~~~~~~~~~~~~~~~~gf~v~~~~~~~~ 789 (842)
.....++ ....+.+++.+.+.+ +||+++.++....
T Consensus 206 ----~g~~~~~-~~~~~~~~l~~~l~~-aGF~i~~~~~~~~ 240 (263)
T 2a14_A 206 ----VGKREFS-CVALEKGEVEQAVLD-AGFDIEQLLHSPQ 240 (263)
T ss_dssp ----ETTEEEE-CCCCCHHHHHHHHHH-TTEEEEEEEEECC
T ss_pred ----eCCeEee-ccccCHHHHHHHHHH-CCCEEEEEeeccc
Confidence 0011122 123478889888887 8999999887653
No 89
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.66 E-value=4.9e-16 Score=158.57 Aligned_cols=159 Identities=16% Similarity=0.221 Sum_probs=121.4
Q ss_pred CCCCCeEEEeccCchHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHHcCCC----CCeEEEEccccCCc-cCCCccEEE
Q 035870 627 VSKGQEVLEIGCGWGTLAIEIVKRTGCKYTGITLSEEQLKYAEMKVKEAGLQ----DLIRLYLCDYRQLA-KANKYDRII 701 (842)
Q Consensus 627 ~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~~l~----~~v~~~~~d~~~~~-~~~~fD~i~ 701 (842)
++++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.+++++...++. ++++++++|+.+++ ++++||+|+
T Consensus 28 ~~~~~~vLdiG~G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~ 106 (235)
T 3sm3_A 28 LQEDDEILDIGCGSGKISLELASK-GYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFHDSSFDFAV 106 (235)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSCTTCEEEEE
T ss_pred CCCCCeEEEECCCCCHHHHHHHhC-CCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCCCCCceeEEE
Confidence 357889999999999999999998 889999999999999999998877762 36899999999988 678999999
Q ss_pred EcchhhhcCh-hhHHHHHHHHHhccccCcEEEEEeecCCCccccccc----------CccchhhhcccC-----CCCCCC
Q 035870 702 SCEMIEAVGH-EFMEEFFGCCESLLAEDGLLVLQFISIPDERYNEYR----------LSSDFIKEYIFP-----GGCLPS 765 (842)
Q Consensus 702 s~~~~~~~~~-~~~~~~~~~~~~~LkpgG~~~~~~~~~~~~~~~~~~----------~~~~~~~~~i~p-----~~~~~~ 765 (842)
++.+++|+++ +....+++++.++|||||++++.++........... ....+....... .....+
T Consensus 107 ~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (235)
T 3sm3_A 107 MQAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVEFGQNWHLKLYRKRYLHDFPITKEEGSFLARDPETGETEFIAHHFT 186 (235)
T ss_dssp EESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEEBCCTTSHHHHHHHHHHHHHHCSTTEEEEECTTTCCEEEEEECBC
T ss_pred EcchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEECCcchhHHHHHHHhhhhccchhhhcceEecccccCCcceeeEeCC
Confidence 9999999975 334589999999999999999988765322100000 000000000000 013568
Q ss_pred HHHHHHHHhhcCCcEEEEEEec
Q 035870 766 LSRITSAMSVASRLCVEQVENI 787 (842)
Q Consensus 766 ~~~~~~~~~~~~gf~v~~~~~~ 787 (842)
.+++.+.+++ +||+++.++..
T Consensus 187 ~~~l~~ll~~-aGf~~~~~~~~ 207 (235)
T 3sm3_A 187 EKELVFLLTD-CRFEIDYFRVK 207 (235)
T ss_dssp HHHHHHHHHT-TTEEEEEEEEE
T ss_pred HHHHHHHHHH-cCCEEEEEEec
Confidence 9999888887 89999888764
No 90
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.66 E-value=7.3e-16 Score=158.46 Aligned_cols=107 Identities=25% Similarity=0.366 Sum_probs=95.8
Q ss_pred CCCCeEEEeccCchHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCccCCCccEEEEcc-hh
Q 035870 628 SKGQEVLEIGCGWGTLAIEIVKRTGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLAKANKYDRIISCE-MI 706 (842)
Q Consensus 628 ~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~~~fD~i~s~~-~~ 706 (842)
.++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.|+++....++ +++++++|+.+++..++||+|+++. ++
T Consensus 36 ~~~~~vLdiG~G~G~~~~~l~~~-~~~~~~~D~s~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~~~fD~v~~~~~~l 112 (246)
T 1y8c_A 36 LVFDDYLDLACGTGNLTENLCPK-FKNTWAVDLSQEMLSEAENKFRSQGL--KPRLACQDISNLNINRKFDLITCCLDST 112 (246)
T ss_dssp CCTTEEEEETCTTSTTHHHHGGG-SSEEEEECSCHHHHHHHHHHHHHTTC--CCEEECCCGGGCCCSCCEEEEEECTTGG
T ss_pred CCCCeEEEeCCCCCHHHHHHHHC-CCcEEEEECCHHHHHHHHHHHhhcCC--CeEEEecccccCCccCCceEEEEcCccc
Confidence 37789999999999999999987 88999999999999999999988765 7999999999887448999999998 99
Q ss_pred hhcCh-hhHHHHHHHHHhccccCcEEEEEeec
Q 035870 707 EAVGH-EFMEEFFGCCESLLAEDGLLVLQFIS 737 (842)
Q Consensus 707 ~~~~~-~~~~~~~~~~~~~LkpgG~~~~~~~~ 737 (842)
+|+.+ +++..++++++++|||||++++....
T Consensus 113 ~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 144 (246)
T 1y8c_A 113 NYIIDSDDLKKYFKAVSNHLKEGGVFIFDINS 144 (246)
T ss_dssp GGCCSHHHHHHHHHHHHTTEEEEEEEEEEEEC
T ss_pred cccCCHHHHHHHHHHHHHhcCCCcEEEEEecC
Confidence 99943 56899999999999999999986543
No 91
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.66 E-value=3.4e-16 Score=162.76 Aligned_cols=106 Identities=17% Similarity=0.250 Sum_probs=93.8
Q ss_pred CCCCeEEEeccCchHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCccCCCccEEEEcc-hh
Q 035870 628 SKGQEVLEIGCGWGTLAIEIVKRTGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLAKANKYDRIISCE-MI 706 (842)
Q Consensus 628 ~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~~~fD~i~s~~-~~ 706 (842)
+++.+|||||||+|.++..+++. +.+|+|+|+|+++++.|+++.. +++++++|+.+++.+++||+|++.. ++
T Consensus 49 ~~~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~~~------~~~~~~~d~~~~~~~~~fD~v~~~~~~l 121 (263)
T 3pfg_A 49 PKAASLLDVACGTGMHLRHLADS-FGTVEGLELSADMLAIARRRNP------DAVLHHGDMRDFSLGRRFSAVTCMFSSI 121 (263)
T ss_dssp TTCCEEEEETCTTSHHHHHHTTT-SSEEEEEESCHHHHHHHHHHCT------TSEEEECCTTTCCCSCCEEEEEECTTGG
T ss_pred CCCCcEEEeCCcCCHHHHHHHHc-CCeEEEEECCHHHHHHHHhhCC------CCEEEECChHHCCccCCcCEEEEcCchh
Confidence 46789999999999999999988 7899999999999999998842 7899999999987668999999998 99
Q ss_pred hhcCh-hhHHHHHHHHHhccccCcEEEEEeecCCC
Q 035870 707 EAVGH-EFMEEFFGCCESLLAEDGLLVLQFISIPD 740 (842)
Q Consensus 707 ~~~~~-~~~~~~~~~~~~~LkpgG~~~~~~~~~~~ 740 (842)
+|+++ +....++++++++|||||++++.....+.
T Consensus 122 ~~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~ 156 (263)
T 3pfg_A 122 GHLAGQAELDAALERFAAHVLPDGVVVVEPWWFPE 156 (263)
T ss_dssp GGSCHHHHHHHHHHHHHHTEEEEEEEEECCCCCTT
T ss_pred hhcCCHHHHHHHHHHHHHhcCCCcEEEEEeccChh
Confidence 99964 46789999999999999999997654443
No 92
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.66 E-value=7e-16 Score=167.70 Aligned_cols=165 Identities=13% Similarity=0.161 Sum_probs=134.4
Q ss_pred HHHHHHHcCCCC-CCeEEEeccCchHHHHHHHHh-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCc--c
Q 035870 618 VSLLIEKARVSK-GQEVLEIGCGWGTLAIEIVKR-TGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLA--K 693 (842)
Q Consensus 618 ~~~l~~~l~~~~-~~~vLDiGcG~G~~~~~la~~-~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~--~ 693 (842)
+..+++.++..+ +.+|||||||+|.++..+++. ++.+++++|+ +.+++.|++++...++.++++++.+|+.+.+ .
T Consensus 167 ~~~~l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~ 245 (352)
T 3mcz_A 167 MVDVVSELGVFARARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARKTIHAHDLGGRVEFFEKNLLDARNFE 245 (352)
T ss_dssp HHHHHHTCGGGTTCCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGGT
T ss_pred HHHHHHhCCCcCCCCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHHHHHhcCCCCceEEEeCCcccCcccC
Confidence 346777777777 899999999999999999988 6789999999 8899999999999888888999999998876 5
Q ss_pred CCCccEEEEcchhhhcChhhHHHHHHHHHhccccCcEEEEEeecCCCcccccc-cCccchhhhcccCCCCCCCHHHHHHH
Q 035870 694 ANKYDRIISCEMIEAVGHEFMEEFFGCCESLLAEDGLLVLQFISIPDERYNEY-RLSSDFIKEYIFPGGCLPSLSRITSA 772 (842)
Q Consensus 694 ~~~fD~i~s~~~~~~~~~~~~~~~~~~~~~~LkpgG~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~p~~~~~~~~~~~~~ 772 (842)
.+.||+|++..++||++++....++++++++|||||++++.+...++...... ....++......+++...+.+++.+.
T Consensus 246 ~~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~l 325 (352)
T 3mcz_A 246 GGAADVVMLNDCLHYFDAREAREVIGHAAGLVKPGGALLILTMTMNDDRVTPALSADFSLHMMVNTNHGELHPTPWIAGV 325 (352)
T ss_dssp TCCEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEECCCTTSSSSHHHHHHHHHHHHHSTTCCCCCHHHHHHH
T ss_pred CCCccEEEEecccccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCCchHHHhhHHHHhhCCCCCcCCHHHHHHH
Confidence 57799999999999999888899999999999999999999887665432111 00111111122467788899999888
Q ss_pred HhhcCCcEEEEE
Q 035870 773 MSVASRLCVEQV 784 (842)
Q Consensus 773 ~~~~~gf~v~~~ 784 (842)
+++ +||+++..
T Consensus 326 l~~-aGf~~~~~ 336 (352)
T 3mcz_A 326 VRD-AGLAVGER 336 (352)
T ss_dssp HHH-TTCEEEEE
T ss_pred HHH-CCCceeee
Confidence 887 89998874
No 93
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.65 E-value=4.6e-17 Score=182.01 Aligned_cols=185 Identities=22% Similarity=0.183 Sum_probs=141.9
Q ss_pred HHHHHHHcCCCCCCeEEEeccCchHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCccCCCc
Q 035870 618 VSLLIEKARVSKGQEVLEIGCGWGTLAIEIVKRTGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLAKANKY 697 (842)
Q Consensus 618 ~~~l~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~~~f 697 (842)
.+.+++.+...++.+|||||||+|.++..+++.+..+|+|+|+|+ +++.|+++++.+++.++|+++++|+.+++..++|
T Consensus 147 ~~~il~~l~~~~~~~VLDiGcGtG~la~~la~~~~~~V~gvD~s~-~l~~A~~~~~~~gl~~~v~~~~~d~~~~~~~~~f 225 (480)
T 3b3j_A 147 QRAILQNHTDFKDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSLPEQV 225 (480)
T ss_dssp HHHHHHTGGGTTTCEEEEESCSTTHHHHHHHHTTCSEEEEEECHH-HHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSCE
T ss_pred HHHHHHhhhhcCCCEEEEecCcccHHHHHHHHcCCCEEEEEEcHH-HHHHHHHHHHHcCCCCcEEEEECchhhCccCCCe
Confidence 355666676678899999999999999999987557999999999 9999999999999988999999999987644689
Q ss_pred cEEEEcchhhhcChhhHHHHHHHHHhccccCcEEEEEeecCC-----C-cccccccCccchhhhcccCCCCCCCHHHHHH
Q 035870 698 DRIISCEMIEAVGHEFMEEFFGCCESLLAEDGLLVLQFISIP-----D-ERYNEYRLSSDFIKEYIFPGGCLPSLSRITS 771 (842)
Q Consensus 698 D~i~s~~~~~~~~~~~~~~~~~~~~~~LkpgG~~~~~~~~~~-----~-~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~ 771 (842)
|+|+|+.+++|+..+.....+.+++++|||||++++...... . ..+.......+|+.+.++||..++++.++..
T Consensus 226 D~Ivs~~~~~~~~~e~~~~~l~~~~~~LkpgG~li~~~~~~~~~pi~~~~l~~e~~~~~~~w~~~~~~g~dl~~l~~~~~ 305 (480)
T 3b3j_A 226 DIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPTIGDVHLAPFTDEQLYMEQFTKANFWYQPSFHGVDLSALRGAAV 305 (480)
T ss_dssp EEEECCCCHHHHTCHHHHHHHHHGGGGEEEEEEEESCEEEEEEEEECCHHHHHHHHHHHHHHHSSCBTTBCCGGGHHHHH
T ss_pred EEEEEeCchHhcCcHHHHHHHHHHHHhcCCCCEEEEEeceeeeeccCchHHHHHHhhccCccccccCCCcChhhhhhHHH
Confidence 999999999999877778888899999999999986432210 0 0110000123455556899999999887743
Q ss_pred HHhhcCCcEEEEEEecCccHHHHHHHHHHHHHHh
Q 035870 772 AMSVASRLCVEQVENIGIHYYQTLRCWRKNFMEK 805 (842)
Q Consensus 772 ~~~~~~gf~v~~~~~~~~~y~~tl~~w~~~~~~~ 805 (842)
. ...+..+.+.++++.+|.+++..|.+.....
T Consensus 306 ~--~~f~~pvvd~~~~~~~y~~tl~~~~d~~~~~ 337 (480)
T 3b3j_A 306 D--EYFRQPVVDTFDIRILMAKSVKYTVNFLEAK 337 (480)
T ss_dssp H--HHTTSCEECCCCSTTBCSCCEEEEEETTTCC
T ss_pred H--hccCCcEEEEeecccccchhhhhhhhhhcCC
Confidence 2 2133467888889999998887665554433
No 94
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.65 E-value=1.1e-15 Score=155.34 Aligned_cols=174 Identities=14% Similarity=0.215 Sum_probs=130.6
Q ss_pred HHHHHcCCCCCCeEEEeccCchHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCC--c-cCCC
Q 035870 620 LLIEKARVSKGQEVLEIGCGWGTLAIEIVKRTGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQL--A-KANK 696 (842)
Q Consensus 620 ~l~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~--~-~~~~ 696 (842)
.+++.+. .++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.++++. .+++++|+.+. + ++++
T Consensus 24 ~l~~~~~-~~~~~vLdiG~G~G~~~~~l~~~-~~~~~~~D~~~~~~~~~~~~~--------~~~~~~d~~~~~~~~~~~~ 93 (230)
T 3cc8_A 24 NLLKHIK-KEWKEVLDIGCSSGALGAAIKEN-GTRVSGIEAFPEAAEQAKEKL--------DHVVLGDIETMDMPYEEEQ 93 (230)
T ss_dssp HHHTTCC-TTCSEEEEETCTTSHHHHHHHTT-TCEEEEEESSHHHHHHHHTTS--------SEEEESCTTTCCCCSCTTC
T ss_pred HHHHHhc-cCCCcEEEeCCCCCHHHHHHHhc-CCeEEEEeCCHHHHHHHHHhC--------CcEEEcchhhcCCCCCCCc
Confidence 4555555 67889999999999999999998 799999999999999998653 37899998773 3 4579
Q ss_pred ccEEEEcchhhhcChhhHHHHHHHHHhccccCcEEEEEeecCCCcccccccCccchhh---hccc-CCCCCCCHHHHHHH
Q 035870 697 YDRIISCEMIEAVGHEFMEEFFGCCESLLAEDGLLVLQFISIPDERYNEYRLSSDFIK---EYIF-PGGCLPSLSRITSA 772 (842)
Q Consensus 697 fD~i~s~~~~~~~~~~~~~~~~~~~~~~LkpgG~~~~~~~~~~~~~~~~~~~~~~~~~---~~i~-p~~~~~~~~~~~~~ 772 (842)
||+|++..+++|+++ +..+++++.++|||||.+++..................|.. .... .+....+..++.+.
T Consensus 94 fD~v~~~~~l~~~~~--~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (230)
T 3cc8_A 94 FDCVIFGDVLEHLFD--PWAVIEKVKPYIKQNGVILASIPNVSHISVLAPLLAGNWTYTEYGLLDKTHIRFFTFNEMLRM 171 (230)
T ss_dssp EEEEEEESCGGGSSC--HHHHHHHTGGGEEEEEEEEEEEECTTSHHHHHHHHTTCCCCBSSSTTBTTCCCCCCHHHHHHH
T ss_pred cCEEEECChhhhcCC--HHHHHHHHHHHcCCCCEEEEEeCCcchHHHHHHHhcCCceeccCCCCCcceEEEecHHHHHHH
Confidence 999999999999976 78999999999999999999876543211000000000100 0001 12245688999888
Q ss_pred HhhcCCcEEEEEEecCccHHHHHHHHHHHHHHhHH
Q 035870 773 MSVASRLCVEQVENIGIHYYQTLRCWRKNFMEKQS 807 (842)
Q Consensus 773 ~~~~~gf~v~~~~~~~~~y~~tl~~w~~~~~~~~~ 807 (842)
+.+ +||+++.++.+..++ .+...|.+++.....
T Consensus 172 l~~-~Gf~~~~~~~~~~~~-~~~~~~~~~l~~~~~ 204 (230)
T 3cc8_A 172 FLK-AGYSISKVDRVYVDH-KMYEPLIEELYGICK 204 (230)
T ss_dssp HHH-TTEEEEEEEEEECCC-GGGHHHHHHHHHHHH
T ss_pred HHH-cCCeEEEEEecccCh-hhccchHHHHHHHHH
Confidence 887 899999999988777 777888888776554
No 95
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.65 E-value=2.1e-15 Score=152.93 Aligned_cols=118 Identities=20% Similarity=0.356 Sum_probs=99.9
Q ss_pred HHHHHHHHHHcCCCCCCeEEEeccCchHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCc-c
Q 035870 615 MRKVSLLIEKARVSKGQEVLEIGCGWGTLAIEIVKRTGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLA-K 693 (842)
Q Consensus 615 ~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~-~ 693 (842)
....+.+.+.+ +++.+|||||||+|.++..+++. +.+|+++|+|+++++.|+++....+ .+++++++|+.+++ +
T Consensus 26 ~~~~~~l~~~~--~~~~~vLDlG~G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~~d~~~~~~~ 100 (227)
T 1ve3_A 26 ETLEPLLMKYM--KKRGKVLDLACGVGGFSFLLEDY-GFEVVGVDISEDMIRKAREYAKSRE--SNVEFIVGDARKLSFE 100 (227)
T ss_dssp HHHHHHHHHSC--CSCCEEEEETCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTT--CCCEEEECCTTSCCSC
T ss_pred HHHHHHHHHhc--CCCCeEEEEeccCCHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHhcC--CCceEEECchhcCCCC
Confidence 33344444443 45889999999999999999988 5699999999999999999998876 47999999999887 5
Q ss_pred CCCccEEEEcchhhhcChhhHHHHHHHHHhccccCcEEEEEeec
Q 035870 694 ANKYDRIISCEMIEAVGHEFMEEFFGCCESLLAEDGLLVLQFIS 737 (842)
Q Consensus 694 ~~~fD~i~s~~~~~~~~~~~~~~~~~~~~~~LkpgG~~~~~~~~ 737 (842)
+++||+|+++.++++....+...++++++++|||||++++....
T Consensus 101 ~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 144 (227)
T 1ve3_A 101 DKTFDYVIFIDSIVHFEPLELNQVFKEVRRVLKPSGKFIMYFTD 144 (227)
T ss_dssp TTCEEEEEEESCGGGCCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CCcEEEEEEcCchHhCCHHHHHHHHHHHHHHcCCCcEEEEEecC
Confidence 67999999999966666566899999999999999999998765
No 96
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.65 E-value=1.4e-15 Score=166.78 Aligned_cols=167 Identities=17% Similarity=0.165 Sum_probs=130.4
Q ss_pred HHHHHHcCCCCCCeEEEeccCchHHHHHHHHh-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCccCCCc
Q 035870 619 SLLIEKARVSKGQEVLEIGCGWGTLAIEIVKR-TGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLAKANKY 697 (842)
Q Consensus 619 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~~~f 697 (842)
..+++.+.++++.+|||||||+|.++..+++. ++.+++++|+ +.+++.|++++...++.++++++.+|+.+..+ ..|
T Consensus 172 ~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~-~~~ 249 (374)
T 1qzz_A 172 EAPADAYDWSAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFKPLP-VTA 249 (374)
T ss_dssp HHHHHTSCCTTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTSCCS-CCE
T ss_pred HHHHHhCCCCCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHHhcCCCCceEEEeCCCCCcCC-CCC
Confidence 45677777888999999999999999999988 5789999999 99999999999999988899999999876222 359
Q ss_pred cEEEEcchhhhcChhhHHHHHHHHHhccccCcEEEEEee--cCCCcccccccCccchhhhcccCCCCCCCHHHHHHHHhh
Q 035870 698 DRIISCEMIEAVGHEFMEEFFGCCESLLAEDGLLVLQFI--SIPDERYNEYRLSSDFIKEYIFPGGCLPSLSRITSAMSV 775 (842)
Q Consensus 698 D~i~s~~~~~~~~~~~~~~~~~~~~~~LkpgG~~~~~~~--~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~ 775 (842)
|+|++..+++|++++....++++++++|||||++++.+. ..++..........++ .....+++...+.+++.+.+.+
T Consensus 250 D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ll~~ 328 (374)
T 1qzz_A 250 DVVLLSFVLLNWSDEDALTILRGCVRALEPGGRLLVLDRADVEGDGADRFFSTLLDL-RMLTFMGGRVRTRDEVVDLAGS 328 (374)
T ss_dssp EEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCH-------HHHHHHHHH-HHHHHHSCCCCCHHHHHHHHHT
T ss_pred CEEEEeccccCCCHHHHHHHHHHHHHhcCCCcEEEEEechhhcCCCCCcchhhhcch-HHHHhCCCcCCCHHHHHHHHHH
Confidence 999999999999987677999999999999999999887 5443211111110111 1112356777899999988887
Q ss_pred cCCcEEEEEEecCc
Q 035870 776 ASRLCVEQVENIGI 789 (842)
Q Consensus 776 ~~gf~v~~~~~~~~ 789 (842)
+||+++.+...+.
T Consensus 329 -aGf~~~~~~~~~~ 341 (374)
T 1qzz_A 329 -AGLALASERTSGS 341 (374)
T ss_dssp -TTEEEEEEEEECC
T ss_pred -CCCceEEEEECCC
Confidence 8999988877654
No 97
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.64 E-value=2.6e-15 Score=158.17 Aligned_cols=146 Identities=15% Similarity=0.176 Sum_probs=115.8
Q ss_pred HHcCCCCCCeEEEeccCchHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCccCCCccEEEE
Q 035870 623 EKARVSKGQEVLEIGCGWGTLAIEIVKRTGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLAKANKYDRIIS 702 (842)
Q Consensus 623 ~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~~~fD~i~s 702 (842)
+.+...++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|++++...++ +++++++|+.+++.+++||+|++
T Consensus 114 ~~~~~~~~~~vLD~GcG~G~~~~~l~~~-g~~v~~vD~s~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~~~fD~i~~ 190 (286)
T 3m70_A 114 DAAKIISPCKVLDLGCGQGRNSLYLSLL-GYDVTSWDHNENSIAFLNETKEKENL--NISTALYDINAANIQENYDFIVS 190 (286)
T ss_dssp HHHHHSCSCEEEEESCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTC--CEEEEECCGGGCCCCSCEEEEEE
T ss_pred HHhhccCCCcEEEECCCCCHHHHHHHHC-CCeEEEEECCHHHHHHHHHHHHHcCC--ceEEEEeccccccccCCccEEEE
Confidence 3333347889999999999999999998 88999999999999999999999887 79999999998876789999999
Q ss_pred cchhhhcChhhHHHHHHHHHhccccCcEEEEEeecCCCcccccccCccchhhhcccCCCCCCCHHHHHHHHhhcCCcEEE
Q 035870 703 CEMIEAVGHEFMEEFFGCCESLLAEDGLLVLQFISIPDERYNEYRLSSDFIKEYIFPGGCLPSLSRITSAMSVASRLCVE 782 (842)
Q Consensus 703 ~~~~~~~~~~~~~~~~~~~~~~LkpgG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~gf~v~ 782 (842)
+.+++|++++....+++++.++|||||++++........... . .+.....+..++.+.+. +|++.
T Consensus 191 ~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~----~--------~~~~~~~~~~~l~~~~~---~~~~~ 255 (286)
T 3m70_A 191 TVVFMFLNRERVPSIIKNMKEHTNVGGYNLIVAAMSTDDVPC----P--------LPFSFTFAENELKEYYK---DWEFL 255 (286)
T ss_dssp CSSGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEEBCCSSSCC----S--------SCCSCCBCTTHHHHHTT---TSEEE
T ss_pred ccchhhCCHHHHHHHHHHHHHhcCCCcEEEEEEecCCCCCCC----C--------CCccccCCHHHHHHHhc---CCEEE
Confidence 999999988888999999999999999988765443321100 0 01122345666665543 48887
Q ss_pred EEEe
Q 035870 783 QVEN 786 (842)
Q Consensus 783 ~~~~ 786 (842)
..+.
T Consensus 256 ~~~~ 259 (286)
T 3m70_A 256 EYNE 259 (286)
T ss_dssp EEEC
T ss_pred EEEc
Confidence 7653
No 98
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.64 E-value=6.1e-16 Score=149.25 Aligned_cols=144 Identities=15% Similarity=0.136 Sum_probs=115.6
Q ss_pred HHHHHHcCCCCCCeEEEeccCchHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCccCCCcc
Q 035870 619 SLLIEKARVSKGQEVLEIGCGWGTLAIEIVKRTGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLAKANKYD 698 (842)
Q Consensus 619 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~~~fD 698 (842)
+.+++.+.+.++.+|||||||+|.++..+++.. .+|+|+|+|+.+++.++++ .+++++.++| ... ++++||
T Consensus 7 ~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~-~~v~~vD~s~~~~~~a~~~------~~~v~~~~~d-~~~-~~~~~D 77 (170)
T 3i9f_A 7 EEYLPNIFEGKKGVIVDYGCGNGFYCKYLLEFA-TKLYCIDINVIALKEVKEK------FDSVITLSDP-KEI-PDNSVD 77 (170)
T ss_dssp TTTHHHHHSSCCEEEEEETCTTCTTHHHHHTTE-EEEEEECSCHHHHHHHHHH------CTTSEEESSG-GGS-CTTCEE
T ss_pred HHHHHhcCcCCCCeEEEECCCCCHHHHHHHhhc-CeEEEEeCCHHHHHHHHHh------CCCcEEEeCC-CCC-CCCceE
Confidence 345666677889999999999999999999984 4999999999999999988 2379999999 222 457999
Q ss_pred EEEEcchhhhcChhhHHHHHHHHHhccccCcEEEEEeecCCCcccccccCccchhhhcccCCCCCCCHHHHHHHHhhcCC
Q 035870 699 RIISCEMIEAVGHEFMEEFFGCCESLLAEDGLLVLQFISIPDERYNEYRLSSDFIKEYIFPGGCLPSLSRITSAMSVASR 778 (842)
Q Consensus 699 ~i~s~~~~~~~~~~~~~~~~~~~~~~LkpgG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~g 778 (842)
+|+++.+++|+++ +..+++++.++|||||++++.++......... |.....+.+++.+.+. |
T Consensus 78 ~v~~~~~l~~~~~--~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~l~---G 139 (170)
T 3i9f_A 78 FILFANSFHDMDD--KQHVISEVKRILKDDGRVIIIDWRKENTGIGP-------------PLSIRMDEKDYMGWFS---N 139 (170)
T ss_dssp EEEEESCSTTCSC--HHHHHHHHHHHEEEEEEEEEEEECSSCCSSSS-------------CGGGCCCHHHHHHHTT---T
T ss_pred EEEEccchhcccC--HHHHHHHHHHhcCCCCEEEEEEcCccccccCc-------------hHhhhcCHHHHHHHHh---C
Confidence 9999999999975 89999999999999999999887654432111 1112247788877665 9
Q ss_pred cEEEEEEecCc
Q 035870 779 LCVEQVENIGI 789 (842)
Q Consensus 779 f~v~~~~~~~~ 789 (842)
|++.....++.
T Consensus 140 f~~~~~~~~~~ 150 (170)
T 3i9f_A 140 FVVEKRFNPTP 150 (170)
T ss_dssp EEEEEEECSST
T ss_pred cEEEEccCCCC
Confidence 99999888764
No 99
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.64 E-value=1.8e-15 Score=160.38 Aligned_cols=111 Identities=18% Similarity=0.248 Sum_probs=97.8
Q ss_pred HcCCCCCCeEEEeccCchHHHHHHHHh--cCCEEEEEcCCHHHHHHHHHHHHHc-CCCCCeEEEEccccCCc-cC-----
Q 035870 624 KARVSKGQEVLEIGCGWGTLAIEIVKR--TGCKYTGITLSEEQLKYAEMKVKEA-GLQDLIRLYLCDYRQLA-KA----- 694 (842)
Q Consensus 624 ~l~~~~~~~vLDiGcG~G~~~~~la~~--~~~~v~gid~s~~~~~~a~~~~~~~-~l~~~v~~~~~d~~~~~-~~----- 694 (842)
.+...++.+|||||||+|.++..+++. ++.+|+|+|+|+.+++.|+++++.. +...+++++++|+.+++ ++
T Consensus 31 ~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~ 110 (299)
T 3g5t_A 31 EYHDGERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKFLGADSVD 110 (299)
T ss_dssp HHCCSCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGGGCTTTTT
T ss_pred HHhcCCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCCcccccccc
Confidence 333468899999999999999999973 5889999999999999999999887 45568999999999987 44
Q ss_pred -CCccEEEEcchhhhcChhhHHHHHHHHHhccccCcEEEEEeec
Q 035870 695 -NKYDRIISCEMIEAVGHEFMEEFFGCCESLLAEDGLLVLQFIS 737 (842)
Q Consensus 695 -~~fD~i~s~~~~~~~~~~~~~~~~~~~~~~LkpgG~~~~~~~~ 737 (842)
++||+|+++.+++|+ + +..+++++.++|||||.+++..+.
T Consensus 111 ~~~fD~V~~~~~l~~~-~--~~~~l~~~~~~LkpgG~l~i~~~~ 151 (299)
T 3g5t_A 111 KQKIDMITAVECAHWF-D--FEKFQRSAYANLRKDGTIAIWGYA 151 (299)
T ss_dssp SSCEEEEEEESCGGGS-C--HHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred CCCeeEEeHhhHHHHh-C--HHHHHHHHHHhcCCCcEEEEEecC
Confidence 799999999999999 4 899999999999999999995554
No 100
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.64 E-value=4.4e-17 Score=164.30 Aligned_cols=179 Identities=10% Similarity=0.121 Sum_probs=122.8
Q ss_pred HHHHcCCCCCCeEEEeccCchHHHHHHHHh-cCCEEEEEcCCHHHHHHHHH----HHHHcCCCCCeEEEEccccCCc-cC
Q 035870 621 LIEKARVSKGQEVLEIGCGWGTLAIEIVKR-TGCKYTGITLSEEQLKYAEM----KVKEAGLQDLIRLYLCDYRQLA-KA 694 (842)
Q Consensus 621 l~~~l~~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gid~s~~~~~~a~~----~~~~~~l~~~v~~~~~d~~~~~-~~ 694 (842)
.++.+.++++.+|||||||+|.++..+++. ++++|+|+|+|++|++.+.+ +....+++ +++++++|+.+++ ++
T Consensus 19 ~~~~l~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~-~v~~~~~d~~~l~~~~ 97 (218)
T 3mq2_A 19 EFEQLRSQYDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGGLP-NLLYLWATAERLPPLS 97 (218)
T ss_dssp HHHHHHTTSSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTCCT-TEEEEECCSTTCCSCC
T ss_pred HHHHhhccCCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcCCC-ceEEEecchhhCCCCC
Confidence 445556788999999999999999999998 47899999999998886433 33345554 8999999999988 44
Q ss_pred CCccEEEEcc---hh--hhcChhhHHHHHHHHHhccccCcEEEEEeecCCCcccccccCccchhhhcccCCCCCCC-HHH
Q 035870 695 NKYDRIISCE---MI--EAVGHEFMEEFFGCCESLLAEDGLLVLQFISIPDERYNEYRLSSDFIKEYIFPGGCLPS-LSR 768 (842)
Q Consensus 695 ~~fD~i~s~~---~~--~~~~~~~~~~~~~~~~~~LkpgG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~-~~~ 768 (842)
+. |.|+... .. +|+++ ...++++++++|||||++++....... ... ..... -.|...... .++
T Consensus 98 ~~-d~v~~~~~~~~~~~~~~~~--~~~~l~~~~~~LkpgG~l~~~~~~~~~--~~~----~~~~~--~~~~~~~~~~~~~ 166 (218)
T 3mq2_A 98 GV-GELHVLMPWGSLLRGVLGS--SPEMLRGMAAVCRPGASFLVALNLHAW--RPS----VPEVG--EHPEPTPDSADEW 166 (218)
T ss_dssp CE-EEEEEESCCHHHHHHHHTS--SSHHHHHHHHTEEEEEEEEEEEEGGGB--TTB----CGGGT--TCCCCCHHHHHHH
T ss_pred CC-CEEEEEccchhhhhhhhcc--HHHHHHHHHHHcCCCcEEEEEeccccc--ccc----ccccc--cCCccchHHHHHH
Confidence 44 6666433 33 25554 589999999999999999995432111 000 00011 111111111 223
Q ss_pred HHHHHhhcCCcEEEEEEecCccHHHHH-HHHHHHHHHhHHHHHhc
Q 035870 769 ITSAMSVASRLCVEQVENIGIHYYQTL-RCWRKNFMEKQSKILAL 812 (842)
Q Consensus 769 ~~~~~~~~~gf~v~~~~~~~~~y~~tl-~~w~~~~~~~~~~~~~~ 812 (842)
+...+.+ +||++.+++.+..++..++ ..|.+++...+++...+
T Consensus 167 l~~~l~~-aGf~i~~~~~~~~~~~~~~~~~w~~~~~~~r~~~~~~ 210 (218)
T 3mq2_A 167 LAPRYAE-AGWKLADCRYLEPEEVAGLETSWTRRLHSSRDRFDVL 210 (218)
T ss_dssp HHHHHHH-TTEEEEEEEEECHHHHHHTCCTHHHHHTTCCSSCSEE
T ss_pred HHHHHHH-cCCCceeeeccchhhhhhhHHHHHHHHcccccceeeE
Confidence 5555665 8999999999988887555 78999987766555443
No 101
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.64 E-value=1.2e-15 Score=156.52 Aligned_cols=163 Identities=18% Similarity=0.200 Sum_probs=121.2
Q ss_pred HHHHHcCCCCCCeEEEeccCchHHHHHHHHhcCC-EEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCc-cCCCc
Q 035870 620 LLIEKARVSKGQEVLEIGCGWGTLAIEIVKRTGC-KYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLA-KANKY 697 (842)
Q Consensus 620 ~l~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~-~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~-~~~~f 697 (842)
.+.+.+...++.+|||||||+|.++..+++. +. +|+|+|+|+.+++.|+++... .+++++++|+.+++ ++++|
T Consensus 34 ~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~----~~~~~~~~d~~~~~~~~~~f 108 (243)
T 3bkw_A 34 ALRAMLPEVGGLRIVDLGCGFGWFCRWAHEH-GASYVLGLDLSEKMLARARAAGPD----TGITYERADLDKLHLPQDSF 108 (243)
T ss_dssp HHHHHSCCCTTCEEEEETCTTCHHHHHHHHT-TCSEEEEEESCHHHHHHHHHTSCS----SSEEEEECCGGGCCCCTTCE
T ss_pred HHHHhccccCCCEEEEEcCcCCHHHHHHHHC-CCCeEEEEcCCHHHHHHHHHhccc----CCceEEEcChhhccCCCCCc
Confidence 4556677778899999999999999999988 66 999999999999999987643 27999999999887 56899
Q ss_pred cEEEEcchhhhcChhhHHHHHHHHHhccccCcEEEEEeecCCC----c--cc-ccccCccchhhhccc-----------C
Q 035870 698 DRIISCEMIEAVGHEFMEEFFGCCESLLAEDGLLVLQFISIPD----E--RY-NEYRLSSDFIKEYIF-----------P 759 (842)
Q Consensus 698 D~i~s~~~~~~~~~~~~~~~~~~~~~~LkpgG~~~~~~~~~~~----~--~~-~~~~~~~~~~~~~i~-----------p 759 (842)
|+|++..+++|+++ +..++++++++|||||++++....... . +. ........-+..|.. +
T Consensus 109 D~v~~~~~l~~~~~--~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (243)
T 3bkw_A 109 DLAYSSLALHYVED--VARLFRTVHQALSPGGHFVFSTEHPIYMAPARPGWAIDAEGRRTWPIDRYLVEGPRKTDWLAKG 186 (243)
T ss_dssp EEEEEESCGGGCSC--HHHHHHHHHHHEEEEEEEEEEEECHHHHCCSSCSCEECTTSCEEEEECCTTCCEEECTTHHHHS
T ss_pred eEEEEeccccccch--HHHHHHHHHHhcCcCcEEEEEeCCcccccCcCcceeecCCCceEEeecccccccceeeeeccCc
Confidence 99999999999975 899999999999999999997643110 0 00 000000000001100 0
Q ss_pred -CCCCCCHHHHHHHHhhcCCcEEEEEEecCcc
Q 035870 760 -GGCLPSLSRITSAMSVASRLCVEQVENIGIH 790 (842)
Q Consensus 760 -~~~~~~~~~~~~~~~~~~gf~v~~~~~~~~~ 790 (842)
.....+.+++.+.+.+ +||+++.++.....
T Consensus 187 ~~~~~~t~~~~~~~l~~-aGF~~~~~~~~~~~ 217 (243)
T 3bkw_A 187 VVKHHRTVGTTLNALIR-SGFAIEHVEEFCPT 217 (243)
T ss_dssp CCEEECCHHHHHHHHHH-TTCEEEEEEECCCC
T ss_pred eEEEeccHHHHHHHHHH-cCCEeeeeccCCCc
Confidence 0122478899888887 89999999876543
No 102
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.64 E-value=2.8e-16 Score=165.83 Aligned_cols=162 Identities=18% Similarity=0.106 Sum_probs=114.1
Q ss_pred HHHHHHHHHcCC--CCCCeEEEeccCchHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHHc-----------------C
Q 035870 616 RKVSLLIEKARV--SKGQEVLEIGCGWGTLAIEIVKRTGCKYTGITLSEEQLKYAEMKVKEA-----------------G 676 (842)
Q Consensus 616 ~~~~~l~~~l~~--~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~-----------------~ 676 (842)
..+..+.+.+.. .++.+|||||||+|..+..++...+.+|+|+|+|++|++.|+++++.. +
T Consensus 56 ~~~~~l~~~l~~~~~~~~~vLDiGcG~G~~~~l~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~ 135 (289)
T 2g72_A 56 WKLRCLAQTFATGEVSGRTLIDIGSGPTVYQLLSACSHFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEG 135 (289)
T ss_dssp HHHHHHHHHHHTSCSCCSEEEEETCTTCCGGGTTGGGGCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHC
T ss_pred HHHHHHHHHhCCCCCCCCeEEEECCCcChHHHHhhccCCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcC
Confidence 334445554432 378899999999999665555545789999999999999999876421 1
Q ss_pred CCC------------CeEEEEccccC-Cc------cCCCccEEEEcchhhhcChh--hHHHHHHHHHhccccCcEEEEEe
Q 035870 677 LQD------------LIRLYLCDYRQ-LA------KANKYDRIISCEMIEAVGHE--FMEEFFGCCESLLAEDGLLVLQF 735 (842)
Q Consensus 677 l~~------------~v~~~~~d~~~-~~------~~~~fD~i~s~~~~~~~~~~--~~~~~~~~~~~~LkpgG~~~~~~ 735 (842)
... .++++.+|+.+ ++ ++++||+|+|+.+++|+..+ ++..++++++++|||||++++..
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~ 215 (289)
T 2g72_A 136 KGECWQDKERQLRARVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIG 215 (289)
T ss_dssp SCCCHHHHHHHHHHHEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred cccchhhhHHHHHhhhceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 000 15678889887 43 23569999999999996543 58999999999999999999975
Q ss_pred ecCCCcccccccCccchhhhcccCCCCCCCHHHHHHHHhhcCCcEEEEEEecC
Q 035870 736 ISIPDERYNEYRLSSDFIKEYIFPGGCLPSLSRITSAMSVASRLCVEQVENIG 788 (842)
Q Consensus 736 ~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~gf~v~~~~~~~ 788 (842)
..... .+.. . ...++ ....+.+++.+.+.+ +||+++.++.+.
T Consensus 216 ~~~~~-~~~~--~------~~~~~-~~~~~~~~l~~~l~~-aGf~~~~~~~~~ 257 (289)
T 2g72_A 216 ALEES-WYLA--G------EARLT-VVPVSEEEVREALVR-SGYKVRDLRTYI 257 (289)
T ss_dssp EESCC-EEEE--T------TEEEE-CCCCCHHHHHHHHHH-TTEEEEEEEEEE
T ss_pred ecCcc-eEEc--C------Ceeee-eccCCHHHHHHHHHH-cCCeEEEeeEee
Confidence 33211 1110 0 00011 234578899888887 899999888765
No 103
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.64 E-value=1e-16 Score=163.65 Aligned_cols=158 Identities=13% Similarity=0.074 Sum_probs=109.8
Q ss_pred hhhhhcCChHHHHhccCCCCcccc--c-ccCCCcccHHHHHHHHHHHHHHHcCCCCCCeEEEeccCchHHHHHHHHhcCC
Q 035870 577 ISRHYDLSNELFSLFLDESMTYSC--A-VFKSEDEDLKAAQMRKVSLLIEKARVSKGQEVLEIGCGWGTLAIEIVKRTGC 653 (842)
Q Consensus 577 i~~~Yd~~~~~~~~~l~~~~~ys~--~-~~~~~~~~l~~aq~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~ 653 (842)
.+.+|+..+++...|.+..+.|+. . +.......+.......++.+...+ .+++.+|||||||+|.++..+++....
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~Yd~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~vLDiGcGtG~~~~~l~~~~~~ 84 (236)
T 1zx0_A 6 ATPIFAPGENCSPAWGAAPAAYDAADTHLRILGKPVMERWETPYMHALAAAA-SSKGGRVLEVGFGMAIAASKVQEAPID 84 (236)
T ss_dssp --CCSCTTCBCHHHHTTSCEEECTTSCEEEETTEEEEEGGGHHHHHHHHHHH-TTTCEEEEEECCTTSHHHHHHHTSCEE
T ss_pred CCCccCCcCCCchhhhcchhhcCCccchhhccchHHHHHHHHHHHHHHHhhc-CCCCCeEEEEeccCCHHHHHHHhcCCC
Confidence 344666666777766666666641 1 111111111111222333343333 568889999999999999999876445
Q ss_pred EEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCC--c-cCCCccEEEE-cchh--hhcChhhHHHHHHHHHhcccc
Q 035870 654 KYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQL--A-KANKYDRIIS-CEMI--EAVGHEFMEEFFGCCESLLAE 727 (842)
Q Consensus 654 ~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~--~-~~~~fD~i~s-~~~~--~~~~~~~~~~~~~~~~~~Lkp 727 (842)
+|+|+|+|+.|++.|+++.+..+ .+++++++|+.++ + ++++||+|++ ...+ +......+..++++++++|||
T Consensus 85 ~v~gvD~s~~~l~~a~~~~~~~~--~~v~~~~~d~~~~~~~~~~~~fD~V~~d~~~~~~~~~~~~~~~~~l~~~~r~Lkp 162 (236)
T 1zx0_A 85 EHWIIECNDGVFQRLRDWAPRQT--HKVIPLKGLWEDVAPTLPDGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKP 162 (236)
T ss_dssp EEEEEECCHHHHHHHHHHGGGCS--SEEEEEESCHHHHGGGSCTTCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEE
T ss_pred eEEEEcCCHHHHHHHHHHHHhcC--CCeEEEecCHHHhhcccCCCceEEEEECCcccchhhhhhhhHHHHHHHHHHhcCC
Confidence 99999999999999999987766 4799999999887 5 5689999999 4442 222333466889999999999
Q ss_pred CcEEEEEeec
Q 035870 728 DGLLVLQFIS 737 (842)
Q Consensus 728 gG~~~~~~~~ 737 (842)
||++++.+..
T Consensus 163 gG~l~~~~~~ 172 (236)
T 1zx0_A 163 GGVLTYCNLT 172 (236)
T ss_dssp EEEEEECCHH
T ss_pred CeEEEEEecC
Confidence 9999986544
No 104
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.64 E-value=1.1e-15 Score=152.92 Aligned_cols=155 Identities=23% Similarity=0.251 Sum_probs=115.1
Q ss_pred CCCCCeEEEeccCchHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCc-cCCCccEEEEcch
Q 035870 627 VSKGQEVLEIGCGWGTLAIEIVKRTGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLA-KANKYDRIISCEM 705 (842)
Q Consensus 627 ~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~-~~~~fD~i~s~~~ 705 (842)
..++.+|||+|||+|.++..++...+.+|+|+|+|+++++.|++++...+ .+++++++|+.+++ ++++||+|++..+
T Consensus 21 ~~~~~~vLDiGcG~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~~d~~~~~~~~~~fD~v~~~~~ 98 (209)
T 2p8j_A 21 SNLDKTVLDCGAGGDLPPLSIFVEDGYKTYGIEISDLQLKKAENFSRENN--FKLNISKGDIRKLPFKDESMSFVYSYGT 98 (209)
T ss_dssp SSSCSEEEEESCCSSSCTHHHHHHTTCEEEEEECCHHHHHHHHHHHHHHT--CCCCEEECCTTSCCSCTTCEEEEEECSC
T ss_pred cCCCCEEEEECCCCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcC--CceEEEECchhhCCCCCCceeEEEEcCh
Confidence 45788999999999998544444458899999999999999999988766 37899999999987 5689999999999
Q ss_pred hhhcChhhHHHHHHHHHhccccCcEEEEEeecCCCcccccccCc--cchhh-hcccC-CCCCCCHHHHHHHHhhcCCcEE
Q 035870 706 IEAVGHEFMEEFFGCCESLLAEDGLLVLQFISIPDERYNEYRLS--SDFIK-EYIFP-GGCLPSLSRITSAMSVASRLCV 781 (842)
Q Consensus 706 ~~~~~~~~~~~~~~~~~~~LkpgG~~~~~~~~~~~~~~~~~~~~--~~~~~-~~i~p-~~~~~~~~~~~~~~~~~~gf~v 781 (842)
++|++.+++..++++++++|||||++++.+++.++..+...... ..+.. ....| ...+.+.+++.+.+.+ .||..
T Consensus 99 l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~-~g~~~ 177 (209)
T 2p8j_A 99 IFHMRKNDVKEAIDEIKRVLKPGGLACINFLTTKDERYNKGEKIGEGEFLQLERGEKVIHSYVSLEEADKYFKD-MKVLF 177 (209)
T ss_dssp GGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEETTSTTTTCSEEEETTEEEECC-CCCEEEEEECHHHHHHTTTT-SEEEE
T ss_pred HHhCCHHHHHHHHHHHHHHcCCCcEEEEEEecccchhccchhhhccccceeccCCCceeEEecCHHHHHHHHhh-cCcee
Confidence 99998777999999999999999999999887665433211000 00000 00001 1134477778776665 78865
Q ss_pred EEE
Q 035870 782 EQV 784 (842)
Q Consensus 782 ~~~ 784 (842)
...
T Consensus 178 ~~~ 180 (209)
T 2p8j_A 178 KED 180 (209)
T ss_dssp EEE
T ss_pred eee
Confidence 543
No 105
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.64 E-value=8.8e-16 Score=163.90 Aligned_cols=171 Identities=11% Similarity=0.048 Sum_probs=123.6
Q ss_pred CCCCeEEEeccCchHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHHcC------CCCCeEEEEccccCCc-------cC
Q 035870 628 SKGQEVLEIGCGWGTLAIEIVKRTGCKYTGITLSEEQLKYAEMKVKEAG------LQDLIRLYLCDYRQLA-------KA 694 (842)
Q Consensus 628 ~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~~------l~~~v~~~~~d~~~~~-------~~ 694 (842)
+++.+|||||||+|.++..+++..+.+|+|+|+|+++++.|+++....+ ...+++++++|+.+++ ++
T Consensus 33 ~~~~~VLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 112 (313)
T 3bgv_A 33 KRDITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDPQ 112 (313)
T ss_dssp --CCEEEEETCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSSTT
T ss_pred CCCCEEEEECCCCcHHHHHHHhcCCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccCC
Confidence 4788999999999999999998767899999999999999999987642 2237999999998764 24
Q ss_pred CCccEEEEcchhhhc--ChhhHHHHHHHHHhccccCcEEEEEeecCCCc----------c---------cccccCccchh
Q 035870 695 NKYDRIISCEMIEAV--GHEFMEEFFGCCESLLAEDGLLVLQFISIPDE----------R---------YNEYRLSSDFI 753 (842)
Q Consensus 695 ~~fD~i~s~~~~~~~--~~~~~~~~~~~~~~~LkpgG~~~~~~~~~~~~----------~---------~~~~~~~~~~~ 753 (842)
++||+|+|+.+++|+ +.++...++++++++|||||.+++..+..... . +........+.
T Consensus 113 ~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~l~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~ 192 (313)
T 3bgv_A 113 MCFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTTPNSFELIRRLEASETESFGNEIYTVKFQKKGDYPLFG 192 (313)
T ss_dssp CCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEECHHHHHHHHTTSSSSEEECSSEEEEESCSSCCCSSC
T ss_pred CCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEecCChHHHHHHHHhhccCccCCeeEEEEeCCCCCCCCcc
Confidence 589999999999998 33557899999999999999999987643110 0 00000011122
Q ss_pred hhccc---CC----CCCCCHHHHHHHHhhcCCcEEEEEEecCccHHHHHHHHH
Q 035870 754 KEYIF---PG----GCLPSLSRITSAMSVASRLCVEQVENIGIHYYQTLRCWR 799 (842)
Q Consensus 754 ~~~i~---p~----~~~~~~~~~~~~~~~~~gf~v~~~~~~~~~y~~tl~~w~ 799 (842)
.+|-| +. ....+..++.+.+.+ .||+++...++...+......|+
T Consensus 193 ~~~~f~l~~~~~~~~~~~~~~~~~~l~~~-~G~~~v~~~~f~~~g~~~~~~~r 244 (313)
T 3bgv_A 193 CKYDFNLEGVVDVPEFLVYFPLLNEMAKK-YNMKLVYKKTFLEFYEEKIKNNE 244 (313)
T ss_dssp CEEEEEEC---CCEEECCCHHHHHHHGGG-GTEEEEEEEEHHHHHHHHTTSHH
T ss_pred ceEEEEECCcccCcceEEcHHHHHHHHHH-cCcEEEEecCHHHHHHHhccchh
Confidence 22222 11 123467777777666 89999999988877766654443
No 106
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.64 E-value=2e-15 Score=150.51 Aligned_cols=160 Identities=21% Similarity=0.238 Sum_probs=118.2
Q ss_pred HHhccCCCCcccccccCCCcccHHHHHHHHHHHHHHHcCCCCCCeEEEeccCchHHHHHHHHhcCCEEEEEcCCHHHHHH
Q 035870 588 FSLFLDESMTYSCAVFKSEDEDLKAAQMRKVSLLIEKARVSKGQEVLEIGCGWGTLAIEIVKRTGCKYTGITLSEEQLKY 667 (842)
Q Consensus 588 ~~~~l~~~~~ys~~~~~~~~~~l~~aq~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~ 667 (842)
...++++.+.|+++.. .......+.+... ++++.+|||||||+|.++..+++.+..+|+++|+|+.+++.
T Consensus 29 ~~~~~~~~~~f~~~~~--------~~~~~~~~~l~~~--~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~ 98 (205)
T 3grz_A 29 EIIRLDPGLAFGTGNH--------QTTQLAMLGIERA--MVKPLTVADVGTGSGILAIAAHKLGAKSVLATDISDESMTA 98 (205)
T ss_dssp EEEEESCC-----CCH--------HHHHHHHHHHHHH--CSSCCEEEEETCTTSHHHHHHHHTTCSEEEEEESCHHHHHH
T ss_pred eeEEecCCcccCCCCC--------ccHHHHHHHHHHh--ccCCCEEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHH
Confidence 3456777777765532 1111222222222 46889999999999999999998745599999999999999
Q ss_pred HHHHHHHcCCCCCeEEEEccccCCccCCCccEEEEcchhhhcChhhHHHHHHHHHhccccCcEEEEEeecCCCccccccc
Q 035870 668 AEMKVKEAGLQDLIRLYLCDYRQLAKANKYDRIISCEMIEAVGHEFMEEFFGCCESLLAEDGLLVLQFISIPDERYNEYR 747 (842)
Q Consensus 668 a~~~~~~~~l~~~v~~~~~d~~~~~~~~~fD~i~s~~~~~~~~~~~~~~~~~~~~~~LkpgG~~~~~~~~~~~~~~~~~~ 747 (842)
|++++...++.+ ++++++|+.+.. +++||+|+++.++++ +..+++++.++|||||++++..+...
T Consensus 99 a~~~~~~~~~~~-v~~~~~d~~~~~-~~~fD~i~~~~~~~~-----~~~~l~~~~~~L~~gG~l~~~~~~~~-------- 163 (205)
T 3grz_A 99 AEENAALNGIYD-IALQKTSLLADV-DGKFDLIVANILAEI-----LLDLIPQLDSHLNEDGQVIFSGIDYL-------- 163 (205)
T ss_dssp HHHHHHHTTCCC-CEEEESSTTTTC-CSCEEEEEEESCHHH-----HHHHGGGSGGGEEEEEEEEEEEEEGG--------
T ss_pred HHHHHHHcCCCc-eEEEeccccccC-CCCceEEEECCcHHH-----HHHHHHHHHHhcCCCCEEEEEecCcc--------
Confidence 999999998874 999999997765 479999999988876 47889999999999999999654322
Q ss_pred CccchhhhcccCCCCCCCHHHHHHHHhhcCCcEEEEEEecCcc
Q 035870 748 LSSDFIKEYIFPGGCLPSLSRITSAMSVASRLCVEQVENIGIH 790 (842)
Q Consensus 748 ~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~gf~v~~~~~~~~~ 790 (842)
+..++.+.+.+ +||++......+.+
T Consensus 164 -----------------~~~~~~~~~~~-~Gf~~~~~~~~~~w 188 (205)
T 3grz_A 164 -----------------QLPKIEQALAE-NSFQIDLKMRAGRW 188 (205)
T ss_dssp -----------------GHHHHHHHHHH-TTEEEEEEEEETTE
T ss_pred -----------------cHHHHHHHHHH-cCCceEEeeccCCE
Confidence 24455666665 89999887765443
No 107
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.64 E-value=1.2e-15 Score=166.06 Aligned_cols=157 Identities=13% Similarity=0.131 Sum_probs=124.9
Q ss_pred CCCCeEEEeccCchHHHHHHHHh-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCC--ccCCCccEEEEcc
Q 035870 628 SKGQEVLEIGCGWGTLAIEIVKR-TGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQL--AKANKYDRIISCE 704 (842)
Q Consensus 628 ~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~--~~~~~fD~i~s~~ 704 (842)
.+..+|||||||+|.++..+++. ++.+++++|+ +.+++.|++++.+.++.++|+++.+|+.+. +..++||+|++..
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~p~~~D~v~~~~ 256 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPFPTGFDAVWMSQ 256 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCCCCCCSEEEEES
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHHHHhcCcccceEEEEccccccCCCCCCCcCEEEEec
Confidence 45679999999999999999987 6889999999 999999999999888877999999999875 3227899999999
Q ss_pred hhhhcChhhHHHHHHHHHhccccCcEEEEEeecCCCcccccccCccchhh----hcccCCCCCCCHHHHHHHHhhcCCcE
Q 035870 705 MIEAVGHEFMEEFFGCCESLLAEDGLLVLQFISIPDERYNEYRLSSDFIK----EYIFPGGCLPSLSRITSAMSVASRLC 780 (842)
Q Consensus 705 ~~~~~~~~~~~~~~~~~~~~LkpgG~~~~~~~~~~~~~~~~~~~~~~~~~----~~i~p~~~~~~~~~~~~~~~~~~gf~ 780 (842)
++|+++++....++++++++|||||++++.+...+............... .....++...+..++.+.+++ +||+
T Consensus 257 vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~-AGf~ 335 (363)
T 3dp7_A 257 FLDCFSEEEVISILTRVAQSIGKDSKVYIMETLWDRQRYETASYCLTQISLYFTAMANGNSKMFHSDDLIRCIEN-AGLE 335 (363)
T ss_dssp CSTTSCHHHHHHHHHHHHHHCCTTCEEEEEECCTTSCSSHHHHHHHHHHHHHHHHSSCSSCCSCCHHHHHHHHHT-TTEE
T ss_pred hhhhCCHHHHHHHHHHHHHhcCCCcEEEEEeeccCCccccchhhHHHHhhhhHHhhhCCCCcccCHHHHHHHHHH-cCCe
Confidence 99999988888999999999999999999887766543221100000011 111234566799999888887 8999
Q ss_pred EEEEEe
Q 035870 781 VEQVEN 786 (842)
Q Consensus 781 v~~~~~ 786 (842)
++.+..
T Consensus 336 ~v~~~~ 341 (363)
T 3dp7_A 336 VEEIQD 341 (363)
T ss_dssp ESCCCC
T ss_pred EEEEEe
Confidence 877653
No 108
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.63 E-value=6.5e-15 Score=160.31 Aligned_cols=165 Identities=13% Similarity=0.184 Sum_probs=131.8
Q ss_pred HHHHHHHcCCCCCCeEEEeccCchHHHHHHHHh-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCccCCC
Q 035870 618 VSLLIEKARVSKGQEVLEIGCGWGTLAIEIVKR-TGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLAKANK 696 (842)
Q Consensus 618 ~~~l~~~l~~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~~~ 696 (842)
.+.+++.+...++.+|||||||+|.++..+++. ++.+++++|+ +.+++.|+++++..+++++++++.+|+.+.+. ..
T Consensus 179 ~~~l~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~-~~ 256 (359)
T 1x19_A 179 IQLLLEEAKLDGVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAAEKGVADRMRGIAVDIYKESY-PE 256 (359)
T ss_dssp HHHHHHHCCCTTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCTTTSCC-CC
T ss_pred HHHHHHhcCCCCCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHHhcCCCCCEEEEeCccccCCC-CC
Confidence 456777888888999999999999999999988 5789999999 99999999999999888789999999988763 23
Q ss_pred ccEEEEcchhhhcChhhHHHHHHHHHhccccCcEEEEEeecCCCcccccccCccchhhhcc-cCCCCC----CCHHHHHH
Q 035870 697 YDRIISCEMIEAVGHEFMEEFFGCCESLLAEDGLLVLQFISIPDERYNEYRLSSDFIKEYI-FPGGCL----PSLSRITS 771 (842)
Q Consensus 697 fD~i~s~~~~~~~~~~~~~~~~~~~~~~LkpgG~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~p~~~~----~~~~~~~~ 771 (842)
+|+|++..+++|++++....++++++++|||||++++.+...++...... ..+..... ..++.. .+.+++.+
T Consensus 257 ~D~v~~~~vlh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~---~~~~~~~~~~~~g~~~~~~~t~~e~~~ 333 (359)
T 1x19_A 257 ADAVLFCRILYSANEQLSTIMCKKAFDAMRSGGRLLILDMVIDDPENPNF---DYLSHYILGAGMPFSVLGFKEQARYKE 333 (359)
T ss_dssp CSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEECCCCTTSCCH---HHHHHHGGGGGSSCCCCCCCCGGGHHH
T ss_pred CCEEEEechhccCCHHHHHHHHHHHHHhcCCCCEEEEEecccCCCCCchH---HHHHHHHHhcCCCCcccCCCCHHHHHH
Confidence 49999999999999888999999999999999999998877654311111 01111111 222333 78899988
Q ss_pred HHhhcCCcEEEEEEecC
Q 035870 772 AMSVASRLCVEQVENIG 788 (842)
Q Consensus 772 ~~~~~~gf~v~~~~~~~ 788 (842)
.+.+ +||+++.+..++
T Consensus 334 ll~~-aGf~~v~~~~~~ 349 (359)
T 1x19_A 334 ILES-LGYKDVTMVRKY 349 (359)
T ss_dssp HHHH-HTCEEEEEEEET
T ss_pred HHHH-CCCceEEEEecC
Confidence 8887 899998887654
No 109
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.63 E-value=1.1e-15 Score=153.85 Aligned_cols=115 Identities=22% Similarity=0.219 Sum_probs=100.5
Q ss_pred HHHHHHcCCCCCCeEEEeccCchHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCccCCCcc
Q 035870 619 SLLIEKARVSKGQEVLEIGCGWGTLAIEIVKRTGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLAKANKYD 698 (842)
Q Consensus 619 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~~~fD 698 (842)
..+...+...++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.|++++...+ +++++++|+.+++++++||
T Consensus 41 ~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~---~~~~~~~d~~~~~~~~~fD 116 (216)
T 3ofk_A 41 QLLRLSLSSGAVSNGLEIGCAAGAFTEKLAPH-CKRLTVIDVMPRAIGRACQRTKRWS---HISWAATDILQFSTAELFD 116 (216)
T ss_dssp HHHHHHTTTSSEEEEEEECCTTSHHHHHHGGG-EEEEEEEESCHHHHHHHHHHTTTCS---SEEEEECCTTTCCCSCCEE
T ss_pred HHHHHHcccCCCCcEEEEcCCCCHHHHHHHHc-CCEEEEEECCHHHHHHHHHhcccCC---CeEEEEcchhhCCCCCCcc
Confidence 34444566778899999999999999999988 6799999999999999999986543 7999999999988778999
Q ss_pred EEEEcchhhhcCh-hhHHHHHHHHHhccccCcEEEEEeec
Q 035870 699 RIISCEMIEAVGH-EFMEEFFGCCESLLAEDGLLVLQFIS 737 (842)
Q Consensus 699 ~i~s~~~~~~~~~-~~~~~~~~~~~~~LkpgG~~~~~~~~ 737 (842)
+|+++.+++|+++ +....+++++.++|||||.+++.+..
T Consensus 117 ~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 156 (216)
T 3ofk_A 117 LIVVAEVLYYLEDMTQMRTAIDNMVKMLAPGGHLVFGSAR 156 (216)
T ss_dssp EEEEESCGGGSSSHHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred EEEEccHHHhCCCHHHHHHHHHHHHHHcCCCCEEEEEecC
Confidence 9999999999986 45678899999999999999997653
No 110
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.63 E-value=3e-15 Score=163.23 Aligned_cols=166 Identities=20% Similarity=0.264 Sum_probs=132.0
Q ss_pred HHHHHHcCCCCCCeEEEeccCchHHHHHHHHh-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCccCCCc
Q 035870 619 SLLIEKARVSKGQEVLEIGCGWGTLAIEIVKR-TGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLAKANKY 697 (842)
Q Consensus 619 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~~~f 697 (842)
..+++.+.++++.+|||||||+|.++..+++. ++.+++++|+ +.+++.|++++...++.++++++.+|+.+..+ ..|
T Consensus 173 ~~l~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~-~~~ 250 (360)
T 1tw3_A 173 DAPAAAYDWTNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFFEPLP-RKA 250 (360)
T ss_dssp HHHHHHSCCTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTTSCCS-SCE
T ss_pred HHHHHhCCCccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHHHhcCCCCceEEEeCCCCCCCC-CCc
Confidence 45677778888999999999999999999988 5789999999 99999999999999988899999999876223 359
Q ss_pred cEEEEcchhhhcChhhHHHHHHHHHhccccCcEEEEEeec-CCCcccccccCccchhhhcccCCCCCCCHHHHHHHHhhc
Q 035870 698 DRIISCEMIEAVGHEFMEEFFGCCESLLAEDGLLVLQFIS-IPDERYNEYRLSSDFIKEYIFPGGCLPSLSRITSAMSVA 776 (842)
Q Consensus 698 D~i~s~~~~~~~~~~~~~~~~~~~~~~LkpgG~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~ 776 (842)
|+|++..+++|++++....++++++++|||||++++.+.. .++..........++. ....+++...+.+++.+.+.+
T Consensus 251 D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~t~~e~~~ll~~- 328 (360)
T 1tw3_A 251 DAIILSFVLLNWPDHDAVRILTRCAEALEPGGRILIHERDDLHENSFNEQFTELDLR-MLVFLGGALRTREKWDGLAAS- 328 (360)
T ss_dssp EEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEECCBCGGGCCSHHHHHHHHH-HHHHHSCCCCBHHHHHHHHHH-
T ss_pred cEEEEcccccCCCHHHHHHHHHHHHHhcCCCcEEEEEEEeccCCCCCcchhhhccHH-HhhhcCCcCCCHHHHHHHHHH-
Confidence 9999999999999877789999999999999999998876 4433111111000111 112345677899999988887
Q ss_pred CCcEEEEEEecC
Q 035870 777 SRLCVEQVENIG 788 (842)
Q Consensus 777 ~gf~v~~~~~~~ 788 (842)
+||+++.+...+
T Consensus 329 aGf~~~~~~~~~ 340 (360)
T 1tw3_A 329 AGLVVEEVRQLP 340 (360)
T ss_dssp TTEEEEEEEEEE
T ss_pred CCCeEEEEEeCC
Confidence 899998887764
No 111
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.62 E-value=5.1e-15 Score=147.04 Aligned_cols=111 Identities=14% Similarity=0.159 Sum_probs=97.8
Q ss_pred HHHHHHcCCCCCCeEEEeccCchHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCC-ccCCCc
Q 035870 619 SLLIEKARVSKGQEVLEIGCGWGTLAIEIVKRTGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQL-AKANKY 697 (842)
Q Consensus 619 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~-~~~~~f 697 (842)
..+++.+.+.++.+|||||||+|.++..+++. +++|+++|+|+++++.|+++++..+++++++++++|+.+. +..++|
T Consensus 45 ~~~l~~l~~~~~~~vLDlGcG~G~~~~~la~~-~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~ 123 (204)
T 3njr_A 45 ALTLAALAPRRGELLWDIGGGSGSVSVEWCLA-GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALADLPLP 123 (204)
T ss_dssp HHHHHHHCCCTTCEEEEETCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGTTSCCC
T ss_pred HHHHHhcCCCCCCEEEEecCCCCHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhcccCCCC
Confidence 45677888899999999999999999999998 8999999999999999999999999987899999999884 344689
Q ss_pred cEEEEcchhhhcChhhHHHHHHHHHhccccCcEEEEEeec
Q 035870 698 DRIISCEMIEAVGHEFMEEFFGCCESLLAEDGLLVLQFIS 737 (842)
Q Consensus 698 D~i~s~~~~~~~~~~~~~~~~~~~~~~LkpgG~~~~~~~~ 737 (842)
|+|++...+ ..+ +++++.++|||||++++..+.
T Consensus 124 D~v~~~~~~------~~~-~l~~~~~~LkpgG~lv~~~~~ 156 (204)
T 3njr_A 124 EAVFIGGGG------SQA-LYDRLWEWLAPGTRIVANAVT 156 (204)
T ss_dssp SEEEECSCC------CHH-HHHHHHHHSCTTCEEEEEECS
T ss_pred CEEEECCcc------cHH-HHHHHHHhcCCCcEEEEEecC
Confidence 999987743 245 999999999999999997653
No 112
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.62 E-value=2.5e-15 Score=149.38 Aligned_cols=143 Identities=19% Similarity=0.226 Sum_probs=114.7
Q ss_pred CCCCeEEEeccCchHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCc-cCCCccEEEEcchh
Q 035870 628 SKGQEVLEIGCGWGTLAIEIVKRTGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLA-KANKYDRIISCEMI 706 (842)
Q Consensus 628 ~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~-~~~~fD~i~s~~~~ 706 (842)
+++ +|||||||+|.++..+++. +.+|+|+|+|+.+++.|+++....+. +++++++|+.+++ ++++||+|+++ +
T Consensus 29 ~~~-~vLdiGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~~~~fD~v~~~--~ 102 (202)
T 2kw5_A 29 PQG-KILCLAEGEGRNACFLASL-GYEVTAVDQSSVGLAKAKQLAQEKGV--KITTVQSNLADFDIVADAWEGIVSI--F 102 (202)
T ss_dssp CSS-EEEECCCSCTHHHHHHHTT-TCEEEEECSSHHHHHHHHHHHHHHTC--CEEEECCBTTTBSCCTTTCSEEEEE--C
T ss_pred CCC-CEEEECCCCCHhHHHHHhC-CCeEEEEECCHHHHHHHHHHHHhcCC--ceEEEEcChhhcCCCcCCccEEEEE--h
Confidence 466 9999999999999999987 88999999999999999999988775 7999999998887 56899999995 3
Q ss_pred hhcChhhHHHHHHHHHhccccCcEEEEEeecCCCcccccccCccchhhhcccCCCCCCCHHHHHHHHhhcCCcEEEEEEe
Q 035870 707 EAVGHEFMEEFFGCCESLLAEDGLLVLQFISIPDERYNEYRLSSDFIKEYIFPGGCLPSLSRITSAMSVASRLCVEQVEN 786 (842)
Q Consensus 707 ~~~~~~~~~~~~~~~~~~LkpgG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~gf~v~~~~~ 786 (842)
.|.+.+....+++++.++|||||++++.........+.... . .......+.+++.+.+. ||+++.++.
T Consensus 103 ~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~---~------~~~~~~~~~~~l~~~l~---Gf~v~~~~~ 170 (202)
T 2kw5_A 103 CHLPSSLRQQLYPKVYQGLKPGGVFILEGFAPEQLQYNTGG---P------KDLDLLPKLETLQSELP---SLNWLIANN 170 (202)
T ss_dssp CCCCHHHHHHHHHHHHTTCCSSEEEEEEEECTTTGGGTSCC---S------SSGGGCCCHHHHHHHCS---SSCEEEEEE
T ss_pred hcCCHHHHHHHHHHHHHhcCCCcEEEEEEeccccccCCCCC---C------CcceeecCHHHHHHHhc---CceEEEEEE
Confidence 56666678999999999999999999988765543221000 0 01123568888887765 999988776
Q ss_pred cC
Q 035870 787 IG 788 (842)
Q Consensus 787 ~~ 788 (842)
..
T Consensus 171 ~~ 172 (202)
T 2kw5_A 171 LE 172 (202)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 113
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.62 E-value=4.1e-15 Score=145.63 Aligned_cols=110 Identities=14% Similarity=0.078 Sum_probs=91.2
Q ss_pred CCCCCCeEEEeccCchHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCc--cCCCccEEEEc
Q 035870 626 RVSKGQEVLEIGCGWGTLAIEIVKRTGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLA--KANKYDRIISC 703 (842)
Q Consensus 626 ~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~--~~~~fD~i~s~ 703 (842)
.++++.+|||+|||+|.++..+++. +.+|+|+|+|+++++.|+++++..++ +++++++.|..+++ .+++||+|+++
T Consensus 19 ~~~~~~~vLDiGcG~G~~~~~la~~-~~~v~~vD~s~~~l~~a~~~~~~~~~-~~v~~~~~~~~~l~~~~~~~fD~v~~~ 96 (185)
T 3mti_A 19 VLDDESIVVDATMGNGNDTAFLAGL-SKKVYAFDVQEQALGKTSQRLSDLGI-ENTELILDGHENLDHYVREPIRAAIFN 96 (185)
T ss_dssp TCCTTCEEEESCCTTSHHHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHHTC-CCEEEEESCGGGGGGTCCSCEEEEEEE
T ss_pred hCCCCCEEEEEcCCCCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHcCC-CcEEEEeCcHHHHHhhccCCcCEEEEe
Confidence 4678999999999999999999998 89999999999999999999999988 58999998887754 35789999987
Q ss_pred c-hhhhc------ChhhHHHHHHHHHhccccCcEEEEEeec
Q 035870 704 E-MIEAV------GHEFMEEFFGCCESLLAEDGLLVLQFIS 737 (842)
Q Consensus 704 ~-~~~~~------~~~~~~~~~~~~~~~LkpgG~~~~~~~~ 737 (842)
. .+.+. ..+....+++++.++|||||++++..+.
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 137 (185)
T 3mti_A 97 LGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYY 137 (185)
T ss_dssp EC-----------CHHHHHHHHHHHHHHEEEEEEEEEEEC-
T ss_pred CCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeC
Confidence 3 33220 1234678899999999999999997654
No 114
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.62 E-value=2.8e-15 Score=161.63 Aligned_cols=166 Identities=14% Similarity=0.170 Sum_probs=130.9
Q ss_pred HHHHHHHcCCCCCCeEEEeccCchHHHHHHHHh-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCccCCC
Q 035870 618 VSLLIEKARVSKGQEVLEIGCGWGTLAIEIVKR-TGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLAKANK 696 (842)
Q Consensus 618 ~~~l~~~l~~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~~~ 696 (842)
...+++.++.++ .+|||||||+|.++..+++. ++.+++++|+ +.+++.|++++...++.++++++.+|+.+ +..++
T Consensus 157 ~~~~~~~~~~~~-~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~~ 233 (334)
T 2ip2_A 157 FHEIPRLLDFRG-RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQ-EVPSN 233 (334)
T ss_dssp HHHHHHHSCCTT-CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTT-CCCSS
T ss_pred HHHHHHhCCCCC-CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCCCC-CCCCC
Confidence 456677777777 89999999999999999988 6789999999 99999999998887777789999999877 32368
Q ss_pred ccEEEEcchhhhcChhhHHHHHHHHHhccccCcEEEEEeecCCCcccccccCccchhhhcccCCCCCCCHHHHHHHHhhc
Q 035870 697 YDRIISCEMIEAVGHEFMEEFFGCCESLLAEDGLLVLQFISIPDERYNEYRLSSDFIKEYIFPGGCLPSLSRITSAMSVA 776 (842)
Q Consensus 697 fD~i~s~~~~~~~~~~~~~~~~~~~~~~LkpgG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~ 776 (842)
||+|++..+++|++++....++++++++|||||++++.+...++..........++.. ....++...+.+++.+.+++
T Consensus 234 ~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~-~~~~~~~~~t~~e~~~ll~~- 311 (334)
T 2ip2_A 234 GDIYLLSRIIGDLDEAASLRLLGNCREAMAGDGRVVVIERTISASEPSPMSVLWDVHL-FMACAGRHRTTEEVVDLLGR- 311 (334)
T ss_dssp CSEEEEESCGGGCCHHHHHHHHHHHHHHSCTTCEEEEEECCBCSSSCCHHHHHHHHHH-HHHHSCCCCBHHHHHHHHHH-
T ss_pred CCEEEEchhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhHHhhhHh-HhhCCCcCCCHHHHHHHHHH-
Confidence 9999999999999987778999999999999999999987765432111110011111 11234566789999888887
Q ss_pred CCcEEEEEEecC
Q 035870 777 SRLCVEQVENIG 788 (842)
Q Consensus 777 ~gf~v~~~~~~~ 788 (842)
+||+++++...+
T Consensus 312 aGf~~~~~~~~~ 323 (334)
T 2ip2_A 312 GGFAVERIVDLP 323 (334)
T ss_dssp TTEEEEEEEEET
T ss_pred CCCceeEEEECC
Confidence 899998887654
No 115
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.62 E-value=1.5e-14 Score=148.26 Aligned_cols=112 Identities=25% Similarity=0.437 Sum_probs=96.5
Q ss_pred HHHHHHcCCCCCCeEEEeccCchHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCccCCCcc
Q 035870 619 SLLIEKARVSKGQEVLEIGCGWGTLAIEIVKRTGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLAKANKYD 698 (842)
Q Consensus 619 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~~~fD 698 (842)
+.+.+.+ +++.+|||||||+|.++..+++. .+|+|+|+|+++++.|+++....+ .+++++++|+.+++..++||
T Consensus 25 ~~~~~~~--~~~~~vLdiG~G~G~~~~~l~~~--~~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~~d~~~~~~~~~fD 98 (243)
T 3d2l_A 25 AWVLEQV--EPGKRIADIGCGTGTATLLLADH--YEVTGVDLSEEMLEIAQEKAMETN--RHVDFWVQDMRELELPEPVD 98 (243)
T ss_dssp HHHHHHS--CTTCEEEEESCTTCHHHHHHTTT--SEEEEEESCHHHHHHHHHHHHHTT--CCCEEEECCGGGCCCSSCEE
T ss_pred HHHHHHc--CCCCeEEEecCCCCHHHHHHhhC--CeEEEEECCHHHHHHHHHhhhhcC--CceEEEEcChhhcCCCCCcC
Confidence 3455554 46789999999999999999887 799999999999999999998776 37999999999887448999
Q ss_pred EEEEcc-hhhhc-ChhhHHHHHHHHHhccccCcEEEEEee
Q 035870 699 RIISCE-MIEAV-GHEFMEEFFGCCESLLAEDGLLVLQFI 736 (842)
Q Consensus 699 ~i~s~~-~~~~~-~~~~~~~~~~~~~~~LkpgG~~~~~~~ 736 (842)
+|++.. +++|+ ..+....+++++.++|||||++++...
T Consensus 99 ~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 138 (243)
T 3d2l_A 99 AITILCDSLNYLQTEADVKQTFDSAARLLTDGGKLLFDVH 138 (243)
T ss_dssp EEEECTTGGGGCCSHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEEEeCCchhhcCCHHHHHHHHHHHHHhcCCCeEEEEEcC
Confidence 999986 99999 445688999999999999999998654
No 116
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.61 E-value=7.3e-16 Score=158.07 Aligned_cols=108 Identities=13% Similarity=0.193 Sum_probs=92.6
Q ss_pred HHHHHHcCCCCCCeEEEeccCchHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCc-cCCCc
Q 035870 619 SLLIEKARVSKGQEVLEIGCGWGTLAIEIVKRTGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLA-KANKY 697 (842)
Q Consensus 619 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~-~~~~f 697 (842)
+.+.+.. ..+.+|||||||+|.++..+++. +.+|+|+|+|+.|++.|+++ .+++++++|+++++ ++++|
T Consensus 31 ~~l~~~~--~~~~~vLDvGcGtG~~~~~l~~~-~~~v~gvD~s~~ml~~a~~~-------~~v~~~~~~~e~~~~~~~sf 100 (257)
T 4hg2_A 31 RWLGEVA--PARGDALDCGCGSGQASLGLAEF-FERVHAVDPGEAQIRQALRH-------PRVTYAVAPAEDTGLPPASV 100 (257)
T ss_dssp HHHHHHS--SCSSEEEEESCTTTTTHHHHHTT-CSEEEEEESCHHHHHTCCCC-------TTEEEEECCTTCCCCCSSCE
T ss_pred HHHHHhc--CCCCCEEEEcCCCCHHHHHHHHh-CCEEEEEeCcHHhhhhhhhc-------CCceeehhhhhhhcccCCcc
Confidence 3444443 34569999999999999999987 78999999999999988642 37999999999998 78999
Q ss_pred cEEEEcchhhhcChhhHHHHHHHHHhccccCcEEEEEeecCC
Q 035870 698 DRIISCEMIEAVGHEFMEEFFGCCESLLAEDGLLVLQFISIP 739 (842)
Q Consensus 698 D~i~s~~~~~~~~~~~~~~~~~~~~~~LkpgG~~~~~~~~~~ 739 (842)
|+|++..++||++ ++.++++++|+|||||++++.....+
T Consensus 101 D~v~~~~~~h~~~---~~~~~~e~~rvLkpgG~l~~~~~~~~ 139 (257)
T 4hg2_A 101 DVAIAAQAMHWFD---LDRFWAELRRVARPGAVFAAVTYGLT 139 (257)
T ss_dssp EEEEECSCCTTCC---HHHHHHHHHHHEEEEEEEEEEEECCC
T ss_pred cEEEEeeehhHhh---HHHHHHHHHHHcCCCCEEEEEECCCC
Confidence 9999999999885 57899999999999999999776544
No 117
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.61 E-value=1.8e-15 Score=159.63 Aligned_cols=158 Identities=16% Similarity=0.160 Sum_probs=108.5
Q ss_pred HHHHHcC-CCCCCeEEEeccCchHHHHHHH----Hh-cCCEE--EEEcCCHHHHHHHHHHHHHc-CCCCCeEE--EEccc
Q 035870 620 LLIEKAR-VSKGQEVLEIGCGWGTLAIEIV----KR-TGCKY--TGITLSEEQLKYAEMKVKEA-GLQDLIRL--YLCDY 688 (842)
Q Consensus 620 ~l~~~l~-~~~~~~vLDiGcG~G~~~~~la----~~-~~~~v--~gid~s~~~~~~a~~~~~~~-~l~~~v~~--~~~d~ 688 (842)
.++..+. ..++.+|||||||+|.++..++ .+ ++.+| +|+|+|++|++.|++++... +++ ++++ ..+|.
T Consensus 42 ~~l~~~~~~~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~-~v~~~~~~~~~ 120 (292)
T 2aot_A 42 GIIGRIGDTKSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLE-NVKFAWHKETS 120 (292)
T ss_dssp HHSSSTTTTCSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCT-TEEEEEECSCH
T ss_pred hHHhhccCCCCCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCC-cceEEEEecch
Confidence 3333333 3577899999999998765433 32 45644 99999999999999998764 443 5544 45566
Q ss_pred cCCc-------cCCCccEEEEcchhhhcChhhHHHHHHHHHhccccCcEEEEEeecCCCcccccccCccchhhhccc-CC
Q 035870 689 RQLA-------KANKYDRIISCEMIEAVGHEFMEEFFGCCESLLAEDGLLVLQFISIPDERYNEYRLSSDFIKEYIF-PG 760 (842)
Q Consensus 689 ~~~~-------~~~~fD~i~s~~~~~~~~~~~~~~~~~~~~~~LkpgG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-p~ 760 (842)
.+++ ++++||+|++..+++|+++ +..++++++++|||||++++............+ ..+....-. +.
T Consensus 121 ~~~~~~~~~~~~~~~fD~V~~~~~l~~~~d--~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~---~~~~~~~~~~~~ 195 (292)
T 2aot_A 121 SEYQSRMLEKKELQKWDFIHMIQMLYYVKD--IPATLKFFHSLLGTNAKMLIIVVSGSSGWDKLW---KKYGSRFPQDDL 195 (292)
T ss_dssp HHHHHHHHTTTCCCCEEEEEEESCGGGCSC--HHHHHHHHHHTEEEEEEEEEEEECTTSHHHHHH---HHHGGGSCCCTT
T ss_pred hhhhhhhccccCCCceeEEEEeeeeeecCC--HHHHHHHHHHHcCCCcEEEEEEecCCccHHHHH---HHHHHhccCCCc
Confidence 5443 2578999999999999987 899999999999999999998654322111000 011111000 12
Q ss_pred CCCCCHHHHHHHHhhcCCcEEEEE
Q 035870 761 GCLPSLSRITSAMSVASRLCVEQV 784 (842)
Q Consensus 761 ~~~~~~~~~~~~~~~~~gf~v~~~ 784 (842)
...++..++.+.+.+ +||++...
T Consensus 196 ~~~~~~~~~~~~l~~-aGf~~~~~ 218 (292)
T 2aot_A 196 CQYITSDDLTQMLDN-LGLKYECY 218 (292)
T ss_dssp CCCCCHHHHHHHHHH-HTCCEEEE
T ss_pred ccCCCHHHHHHHHHH-CCCceEEE
Confidence 345688898888887 89988764
No 118
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.61 E-value=5.7e-15 Score=151.09 Aligned_cols=106 Identities=21% Similarity=0.305 Sum_probs=92.2
Q ss_pred CCCCeEEEeccCchHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCccCCCccEEEE-cchh
Q 035870 628 SKGQEVLEIGCGWGTLAIEIVKRTGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLAKANKYDRIIS-CEMI 706 (842)
Q Consensus 628 ~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~~~fD~i~s-~~~~ 706 (842)
.++.+|||||||+|.++..+++. +.+|+|+|+|+++++.|+++. .+++++++|+.+++.+++||+|+| ..++
T Consensus 39 ~~~~~vLdiG~G~G~~~~~l~~~-~~~v~~~D~s~~~~~~a~~~~------~~~~~~~~d~~~~~~~~~~D~v~~~~~~~ 111 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHLEHFTKE-FGDTAGLELSEDMLTHARKRL------PDATLHQGDMRDFRLGRKFSAVVSMFSSV 111 (239)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHH-HSEEEEEESCHHHHHHHHHHC------TTCEEEECCTTTCCCSSCEEEEEECTTGG
T ss_pred CCCCeEEEecccCCHHHHHHHHh-CCcEEEEeCCHHHHHHHHHhC------CCCEEEECCHHHcccCCCCcEEEEcCchH
Confidence 67889999999999999999988 559999999999999999874 268999999998876679999996 4599
Q ss_pred hhcCh-hhHHHHHHHHHhccccCcEEEEEeecCCC
Q 035870 707 EAVGH-EFMEEFFGCCESLLAEDGLLVLQFISIPD 740 (842)
Q Consensus 707 ~~~~~-~~~~~~~~~~~~~LkpgG~~~~~~~~~~~ 740 (842)
+|+.+ +....++++++++|||||++++.....+.
T Consensus 112 ~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~ 146 (239)
T 3bxo_A 112 GYLKTTEELGAAVASFAEHLEPGGVVVVEPWWFPE 146 (239)
T ss_dssp GGCCSHHHHHHHHHHHHHTEEEEEEEEECCCCCTT
T ss_pred hhcCCHHHHHHHHHHHHHhcCCCeEEEEEeccCcc
Confidence 99964 56889999999999999999998665543
No 119
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.61 E-value=2.1e-15 Score=158.95 Aligned_cols=160 Identities=11% Similarity=0.025 Sum_probs=111.6
Q ss_pred CCCCeEEEeccCchHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHHcCCCC-----CeEEEEccc------cCCc---c
Q 035870 628 SKGQEVLEIGCGWGTLAIEIVKRTGCKYTGITLSEEQLKYAEMKVKEAGLQD-----LIRLYLCDY------RQLA---K 693 (842)
Q Consensus 628 ~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~~l~~-----~v~~~~~d~------~~~~---~ 693 (842)
+++.+|||||||+|..+..+++..+.+|+|+|+|++|++.|+++....+... ++++.+.|+ .+++ +
T Consensus 47 ~~~~~VLDlGCG~G~~l~~~~~~~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~ 126 (302)
T 2vdw_A 47 SNKRKVLAIDFGNGADLEKYFYGEIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFY 126 (302)
T ss_dssp CSCCEEEETTCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCC
T ss_pred CCCCeEEEEecCCcHhHHHHHhcCCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhcccc
Confidence 3578999999999987666666546799999999999999999988765421 267888887 3322 4
Q ss_pred CCCccEEEEcchhhhc-ChhhHHHHHHHHHhccccCcEEEEEeecCCCccc--c-----cccC---ccc----------h
Q 035870 694 ANKYDRIISCEMIEAV-GHEFMEEFFGCCESLLAEDGLLVLQFISIPDERY--N-----EYRL---SSD----------F 752 (842)
Q Consensus 694 ~~~fD~i~s~~~~~~~-~~~~~~~~~~~~~~~LkpgG~~~~~~~~~~~~~~--~-----~~~~---~~~----------~ 752 (842)
+++||+|+|..+++++ ..++...++++++++|||||++++.++....... . .... ... .
T Consensus 127 ~~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 206 (302)
T 2vdw_A 127 FGKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITTMDGDKLSKLTDKKTFIIHKNLPSSENYMSVEKIADDR 206 (302)
T ss_dssp SSCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEECHHHHTTCCSCEEEECCSSSCTTTSEEEECEEETTE
T ss_pred CCCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHhcCCcccccccccccceeeeccccccc
Confidence 5799999999999875 3345789999999999999999998764221100 0 0000 000 0
Q ss_pred hhhcccCCC-------CCCCHHHHHHHHhhcCCcEEEEEEecCc
Q 035870 753 IKEYIFPGG-------CLPSLSRITSAMSVASRLCVEQVENIGI 789 (842)
Q Consensus 753 ~~~~i~p~~-------~~~~~~~~~~~~~~~~gf~v~~~~~~~~ 789 (842)
+..|. |.+ ++.+..++.+.+.+ +||+++....+..
T Consensus 207 ~~~~~-~~~~~~~~~e~~v~~~el~~l~~~-~Gl~lv~~~~f~~ 248 (302)
T 2vdw_A 207 IVVYN-PSTMSTPMTEYIIKKNDIVRVFNE-YGFVLVDNVDFAT 248 (302)
T ss_dssp EEEBC-TTTBSSCEEEECCCHHHHHHHHHH-TTEEEEEEEEHHH
T ss_pred cceee-ccccCCCceeeeeEHHHHHHHHHH-CCCEEEEecChHH
Confidence 01121 222 24567888777776 8999999987653
No 120
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.61 E-value=4.6e-15 Score=156.84 Aligned_cols=118 Identities=21% Similarity=0.295 Sum_probs=100.2
Q ss_pred HHHHHHcCCCCCCeEEEeccCchHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHHcCCC---CCeEEEEccccCCc---
Q 035870 619 SLLIEKARVSKGQEVLEIGCGWGTLAIEIVKRTGCKYTGITLSEEQLKYAEMKVKEAGLQ---DLIRLYLCDYRQLA--- 692 (842)
Q Consensus 619 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~~l~---~~v~~~~~d~~~~~--- 692 (842)
+.+.+.+...++.+|||||||+|.++..+++. +.+|+|+|+|+.|++.|+++....+.. .++.+..+|+.+++
T Consensus 47 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 125 (293)
T 3thr_A 47 AWLLGLLRQHGCHRVLDVACGTGVDSIMLVEE-GFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDV 125 (293)
T ss_dssp HHHHHHHHHTTCCEEEETTCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHHS
T ss_pred HHHHHHhcccCCCEEEEecCCCCHHHHHHHHC-CCeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCcccc
Confidence 34455555567889999999999999999998 789999999999999999987544322 26889999988875
Q ss_pred -cCCCccEEEEc-chhhhcCh-----hhHHHHHHHHHhccccCcEEEEEeec
Q 035870 693 -KANKYDRIISC-EMIEAVGH-----EFMEEFFGCCESLLAEDGLLVLQFIS 737 (842)
Q Consensus 693 -~~~~fD~i~s~-~~~~~~~~-----~~~~~~~~~~~~~LkpgG~~~~~~~~ 737 (842)
++++||+|++. .+++|+++ +.+..++++++++|||||++++....
T Consensus 126 ~~~~~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 177 (293)
T 3thr_A 126 PAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHRN 177 (293)
T ss_dssp CCTTCEEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred ccCCCeEEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 56899999999 89999987 67899999999999999999997653
No 121
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.61 E-value=5.5e-15 Score=152.52 Aligned_cols=120 Identities=25% Similarity=0.408 Sum_probs=103.5
Q ss_pred HHHHHHHHHHcCCCCCCeEEEeccCchHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCccC
Q 035870 615 MRKVSLLIEKARVSKGQEVLEIGCGWGTLAIEIVKRTGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLAKA 694 (842)
Q Consensus 615 ~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~ 694 (842)
...+..++..+..+++.+|||+|||+|.++..+++. +.+|+|+|+|+++++.|++++...++ +++++++|+.+++..
T Consensus 27 ~~~~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~--~v~~~~~d~~~~~~~ 103 (252)
T 1wzn_A 27 IDFVEEIFKEDAKREVRRVLDLACGTGIPTLELAER-GYEVVGLDLHEEMLRVARRKAKERNL--KIEFLQGDVLEIAFK 103 (252)
T ss_dssp HHHHHHHHHHTCSSCCCEEEEETCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTC--CCEEEESCGGGCCCC
T ss_pred HHHHHHHHHHhcccCCCEEEEeCCCCCHHHHHHHHC-CCeEEEEECCHHHHHHHHHHHHhcCC--ceEEEECChhhcccC
Confidence 455666777776678899999999999999999997 88999999999999999999988775 699999999988755
Q ss_pred CCccEEEEc-chhhhcChhhHHHHHHHHHhccccCcEEEEEeec
Q 035870 695 NKYDRIISC-EMIEAVGHEFMEEFFGCCESLLAEDGLLVLQFIS 737 (842)
Q Consensus 695 ~~fD~i~s~-~~~~~~~~~~~~~~~~~~~~~LkpgG~~~~~~~~ 737 (842)
++||+|++. ..+++.+.+....++++++++|||||.+++....
T Consensus 104 ~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~li~~~~~ 147 (252)
T 1wzn_A 104 NEFDAVTMFFSTIMYFDEEDLRKLFSKVAEALKPGGVFITDFPC 147 (252)
T ss_dssp SCEEEEEECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CCccEEEEcCCchhcCCHHHHHHHHHHHHHHcCCCeEEEEeccc
Confidence 789999997 4566777667899999999999999999986543
No 122
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.60 E-value=3.7e-15 Score=161.32 Aligned_cols=162 Identities=12% Similarity=0.192 Sum_probs=124.7
Q ss_pred HHHHHHHcCCCCCCeEEEeccCchHHHHHHHHh-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCccCCC
Q 035870 618 VSLLIEKARVSKGQEVLEIGCGWGTLAIEIVKR-TGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLAKANK 696 (842)
Q Consensus 618 ~~~l~~~l~~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~~~ 696 (842)
...+++.+.++++.+|||||||+|.++..+++. ++.+++++|++ .++. +++++..++.++|+++.+|+.+..+ +
T Consensus 173 ~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~--~~~~~~~~~~~~v~~~~~d~~~~~p--~ 247 (348)
T 3lst_A 173 HLILARAGDFPATGTVADVGGGRGGFLLTVLREHPGLQGVLLDRA-EVVA--RHRLDAPDVAGRWKVVEGDFLREVP--H 247 (348)
T ss_dssp HHHHHHHSCCCSSEEEEEETCTTSHHHHHHHHHCTTEEEEEEECH-HHHT--TCCCCCGGGTTSEEEEECCTTTCCC--C
T ss_pred HHHHHHhCCccCCceEEEECCccCHHHHHHHHHCCCCEEEEecCH-HHhh--cccccccCCCCCeEEEecCCCCCCC--C
Confidence 456778888888999999999999999999988 67799999994 4444 4444445666789999999963223 8
Q ss_pred ccEEEEcchhhhcChhhHHHHHHHHHhccccCcEEEEEeecCCCcccccccCccchhhhcccCCCCCCCHHHHHHHHhhc
Q 035870 697 YDRIISCEMIEAVGHEFMEEFFGCCESLLAEDGLLVLQFISIPDERYNEYRLSSDFIKEYIFPGGCLPSLSRITSAMSVA 776 (842)
Q Consensus 697 fD~i~s~~~~~~~~~~~~~~~~~~~~~~LkpgG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~ 776 (842)
||+|++..++||++++....++++++++|||||++++.+...++..........++ ......++...+.+++.+.+.+
T Consensus 248 ~D~v~~~~vlh~~~d~~~~~~L~~~~~~LkpgG~l~i~e~~~~~~~~~~~~~~~d~-~~~~~~~~~~~t~~e~~~ll~~- 325 (348)
T 3lst_A 248 ADVHVLKRILHNWGDEDSVRILTNCRRVMPAHGRVLVIDAVVPEGNDAHQSKEMDF-MMLAARTGQERTAAELEPLFTA- 325 (348)
T ss_dssp CSEEEEESCGGGSCHHHHHHHHHHHHHTCCTTCEEEEEECCBCSSSSCCHHHHHHH-HHHHTTSCCCCBHHHHHHHHHH-
T ss_pred CcEEEEehhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhhhcCh-hhhhcCCCcCCCHHHHHHHHHH-
Confidence 99999999999999877789999999999999999998877665421111111111 1112366778899999888887
Q ss_pred CCcEEEEEEe
Q 035870 777 SRLCVEQVEN 786 (842)
Q Consensus 777 ~gf~v~~~~~ 786 (842)
+||+++++..
T Consensus 326 aGf~~~~~~~ 335 (348)
T 3lst_A 326 AGLRLDRVVG 335 (348)
T ss_dssp TTEEEEEEEE
T ss_pred CCCceEEEEE
Confidence 8999988876
No 123
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.60 E-value=1.5e-14 Score=144.03 Aligned_cols=113 Identities=16% Similarity=0.202 Sum_probs=99.5
Q ss_pred HHHHHHHcCCCCCCeEEEeccCchHHHHHHHHh-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCc-cCC
Q 035870 618 VSLLIEKARVSKGQEVLEIGCGWGTLAIEIVKR-TGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLA-KAN 695 (842)
Q Consensus 618 ~~~l~~~l~~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~-~~~ 695 (842)
...+++.+.++++.+|||||||+|.++..+++. +..+|+++|+|+++++.|+++++..++ ++++++++|+.+.. ..+
T Consensus 29 ~~~~l~~l~~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~~~~~~ 107 (204)
T 3e05_A 29 RAVTLSKLRLQDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVA-RNVTLVEAFAPEGLDDLP 107 (204)
T ss_dssp HHHHHHHTTCCTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTC-TTEEEEECCTTTTCTTSC
T ss_pred HHHHHHHcCCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCC-CcEEEEeCChhhhhhcCC
Confidence 356778888999999999999999999999998 358999999999999999999999888 58999999986654 447
Q ss_pred CccEEEEcchhhhcChhhHHHHHHHHHhccccCcEEEEEee
Q 035870 696 KYDRIISCEMIEAVGHEFMEEFFGCCESLLAEDGLLVLQFI 736 (842)
Q Consensus 696 ~fD~i~s~~~~~~~~~~~~~~~~~~~~~~LkpgG~~~~~~~ 736 (842)
+||+|++..+++ .+..+++++.++|||||++++...
T Consensus 108 ~~D~i~~~~~~~-----~~~~~l~~~~~~LkpgG~l~~~~~ 143 (204)
T 3e05_A 108 DPDRVFIGGSGG-----MLEEIIDAVDRRLKSEGVIVLNAV 143 (204)
T ss_dssp CCSEEEESCCTT-----CHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred CCCEEEECCCCc-----CHHHHHHHHHHhcCCCeEEEEEec
Confidence 899999988765 378999999999999999999654
No 124
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.60 E-value=3.4e-15 Score=155.40 Aligned_cols=154 Identities=19% Similarity=0.178 Sum_probs=115.9
Q ss_pred CCCCCCeEEEeccCchHHHHHHHHhcCC-EEEEEcCCHHHHHHHHHHHHHcCC---------------------------
Q 035870 626 RVSKGQEVLEIGCGWGTLAIEIVKRTGC-KYTGITLSEEQLKYAEMKVKEAGL--------------------------- 677 (842)
Q Consensus 626 ~~~~~~~vLDiGcG~G~~~~~la~~~~~-~v~gid~s~~~~~~a~~~~~~~~l--------------------------- 677 (842)
...++.+|||||||+|.++..+++. +. +|+|+|+|+.+++.|++++...+.
T Consensus 53 ~~~~~~~vLDlGcG~G~~~~~l~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (265)
T 2i62_A 53 GAVKGELLIDIGSGPTIYQLLSACE-SFTEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEK 131 (265)
T ss_dssp SSCCEEEEEEESCTTCCGGGTTGGG-TEEEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHH
T ss_pred cccCCCEEEEECCCccHHHHHHhhc-ccCeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHH
Confidence 4567889999999999999998887 55 999999999999999998865421
Q ss_pred -CCCe-EEEEccccCCc--cC---CCccEEEEcchhhhcChh--hHHHHHHHHHhccccCcEEEEEeecCCCcccccccC
Q 035870 678 -QDLI-RLYLCDYRQLA--KA---NKYDRIISCEMIEAVGHE--FMEEFFGCCESLLAEDGLLVLQFISIPDERYNEYRL 748 (842)
Q Consensus 678 -~~~v-~~~~~d~~~~~--~~---~~fD~i~s~~~~~~~~~~--~~~~~~~~~~~~LkpgG~~~~~~~~~~~~~~~~~~~ 748 (842)
..++ +++++|+.+.. ++ ++||+|+++.+++|+... .+..+++++.++|||||++++.+..... .+...
T Consensus 132 l~~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~-~~~~~-- 208 (265)
T 2i62_A 132 LRRAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDALKSS-YYMIG-- 208 (265)
T ss_dssp HHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCC-EEEET--
T ss_pred hhhhheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEecCCCc-eEEcC--
Confidence 0127 99999998764 34 789999999999966433 5889999999999999999998754332 11100
Q ss_pred ccchhhhcccCCCCCCCHHHHHHHHhhcCCcEEEEEEecCccH
Q 035870 749 SSDFIKEYIFPGGCLPSLSRITSAMSVASRLCVEQVENIGIHY 791 (842)
Q Consensus 749 ~~~~~~~~i~p~~~~~~~~~~~~~~~~~~gf~v~~~~~~~~~y 791 (842)
...++ ....+.+++.+.+.+ +||+++.++....+|
T Consensus 209 ------~~~~~-~~~~~~~~~~~~l~~-aGf~~~~~~~~~~~~ 243 (265)
T 2i62_A 209 ------EQKFS-SLPLGWETVRDAVEE-AGYTIEQFEVISQNY 243 (265)
T ss_dssp ------TEEEE-CCCCCHHHHHHHHHH-TTCEEEEEEEECCCC
T ss_pred ------Ccccc-ccccCHHHHHHHHHH-CCCEEEEEEEecccC
Confidence 00000 123467788888877 899999988766444
No 125
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.60 E-value=4.4e-15 Score=148.79 Aligned_cols=142 Identities=15% Similarity=0.150 Sum_probs=107.0
Q ss_pred HHHHHHcCCCCCCeEEEeccCchHHHHHHHHhcCC-EEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCc-cCCC
Q 035870 619 SLLIEKARVSKGQEVLEIGCGWGTLAIEIVKRTGC-KYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLA-KANK 696 (842)
Q Consensus 619 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~-~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~-~~~~ 696 (842)
..++..+.. ++.+|||||||+|.++..+ +. +|+|+|+|+.+++.++++. .+++++++|+.+++ ++++
T Consensus 27 ~~~l~~~~~-~~~~vLdiG~G~G~~~~~l----~~~~v~~vD~s~~~~~~a~~~~------~~~~~~~~d~~~~~~~~~~ 95 (211)
T 2gs9_A 27 ERALKGLLP-PGESLLEVGAGTGYWLRRL----PYPQKVGVEPSEAMLAVGRRRA------PEATWVRAWGEALPFPGES 95 (211)
T ss_dssp HHHHHTTCC-CCSEEEEETCTTCHHHHHC----CCSEEEEECCCHHHHHHHHHHC------TTSEEECCCTTSCCSCSSC
T ss_pred HHHHHHhcC-CCCeEEEECCCCCHhHHhC----CCCeEEEEeCCHHHHHHHHHhC------CCcEEEEcccccCCCCCCc
Confidence 344555433 7889999999999998877 56 9999999999999999886 37899999999988 6689
Q ss_pred ccEEEEcchhhhcChhhHHHHHHHHHhccccCcEEEEEeecCCCcccccccCccchhhhcccCCCCCCCHHHHHHHHh
Q 035870 697 YDRIISCEMIEAVGHEFMEEFFGCCESLLAEDGLLVLQFISIPDERYNEYRLSSDFIKEYIFPGGCLPSLSRITSAMS 774 (842)
Q Consensus 697 fD~i~s~~~~~~~~~~~~~~~~~~~~~~LkpgG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~ 774 (842)
||+|++..+++|+++ +..+++++.++|||||++++.++.........+.. ........+......+.+++.+.+.
T Consensus 96 fD~v~~~~~l~~~~~--~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~s~~~l~~~l~ 170 (211)
T 2gs9_A 96 FDVVLLFTTLEFVED--VERVLLEARRVLRPGGALVVGVLEALSPWAALYRR-LGEKGVLPWAQARFLAREDLKALLG 170 (211)
T ss_dssp EEEEEEESCTTTCSC--HHHHHHHHHHHEEEEEEEEEEEECTTSHHHHHHHH-HHHTTCTTGGGCCCCCHHHHHHHHC
T ss_pred EEEEEEcChhhhcCC--HHHHHHHHHHHcCCCCEEEEEecCCcCcHHHHHHH-HhhccCccccccccCCHHHHHHHhc
Confidence 999999999999976 88999999999999999999887654321111000 0000001112345678999987765
No 126
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.59 E-value=6.3e-15 Score=148.54 Aligned_cols=140 Identities=18% Similarity=0.180 Sum_probs=108.6
Q ss_pred CCeEEEeccCchHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCc-cCCCccEEEEcchhhh
Q 035870 630 GQEVLEIGCGWGTLAIEIVKRTGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLA-KANKYDRIISCEMIEA 708 (842)
Q Consensus 630 ~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~-~~~~fD~i~s~~~~~~ 708 (842)
+.+|||||||+|.++..+++. +|+|+|+.+++.++++ +++++++|+.+++ ++++||+|++..+++|
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~-----~~vD~s~~~~~~a~~~--------~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 114 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK-----IGVEPSERMAEIARKR--------GVFVLKGTAENLPLKDESFDFALMVTTICF 114 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC-----EEEESCHHHHHHHHHT--------TCEEEECBTTBCCSCTTCEEEEEEESCGGG
T ss_pred CCcEEEeCCCCCHHHHHHHHH-----hccCCCHHHHHHHHhc--------CCEEEEcccccCCCCCCCeeEEEEcchHhh
Confidence 789999999999999888754 9999999999999876 5789999998887 5679999999999999
Q ss_pred cChhhHHHHHHHHHhccccCcEEEEEeecCCCcccccccCccchhhhcccCCCCCCCHHHHHHHHhhcCCcEEEEEEec
Q 035870 709 VGHEFMEEFFGCCESLLAEDGLLVLQFISIPDERYNEYRLSSDFIKEYIFPGGCLPSLSRITSAMSVASRLCVEQVENI 787 (842)
Q Consensus 709 ~~~~~~~~~~~~~~~~LkpgG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~gf~v~~~~~~ 787 (842)
+++ +..+++++.++|||||.+++............+... ......+......+..++.+.+.+ +||+++.+...
T Consensus 115 ~~~--~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~l~~-~Gf~~~~~~~~ 188 (219)
T 1vlm_A 115 VDD--PERALKEAYRILKKGGYLIVGIVDRESFLGREYEKN--KEKSVFYKNARFFSTEELMDLMRK-AGFEEFKVVQT 188 (219)
T ss_dssp SSC--HHHHHHHHHHHEEEEEEEEEEEECSSSHHHHHHHHT--TTC-CCSTTCCCCCHHHHHHHHHH-TTCEEEEEEEE
T ss_pred ccC--HHHHHHHHHHHcCCCcEEEEEEeCCccHHHHHHHHH--hcCcchhcccccCCHHHHHHHHHH-CCCeEEEEecc
Confidence 976 789999999999999999998765432211100000 000111123455789999888887 89999887764
No 127
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.59 E-value=1.4e-14 Score=143.04 Aligned_cols=134 Identities=20% Similarity=0.267 Sum_probs=112.1
Q ss_pred HHHHcCCCCCCeEEEeccCchHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCc-cCCCccE
Q 035870 621 LIEKARVSKGQEVLEIGCGWGTLAIEIVKRTGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLA-KANKYDR 699 (842)
Q Consensus 621 l~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~-~~~~fD~ 699 (842)
++..+ ++++.+|||||||+|.++..+++. +.+|+++|+|+.+++.++++. .+++++++|+.+++ ++++||+
T Consensus 39 ~l~~~-~~~~~~vLdiG~G~G~~~~~l~~~-~~~v~~~D~~~~~~~~a~~~~------~~~~~~~~d~~~~~~~~~~~D~ 110 (195)
T 3cgg_A 39 LIDAM-APRGAKILDAGCGQGRIGGYLSKQ-GHDVLGTDLDPILIDYAKQDF------PEARWVVGDLSVDQISETDFDL 110 (195)
T ss_dssp HHHHH-SCTTCEEEEETCTTTHHHHHHHHT-TCEEEEEESCHHHHHHHHHHC------TTSEEEECCTTTSCCCCCCEEE
T ss_pred HHHHh-ccCCCeEEEECCCCCHHHHHHHHC-CCcEEEEcCCHHHHHHHHHhC------CCCcEEEcccccCCCCCCceeE
Confidence 44444 568889999999999999999998 889999999999999999875 26899999998876 5679999
Q ss_pred EEEc-chhhhcChhhHHHHHHHHHhccccCcEEEEEeecCCCcccccccCccchhhhcccCCCCCCCHHHHHHHHhhcCC
Q 035870 700 IISC-EMIEAVGHEFMEEFFGCCESLLAEDGLLVLQFISIPDERYNEYRLSSDFIKEYIFPGGCLPSLSRITSAMSVASR 778 (842)
Q Consensus 700 i~s~-~~~~~~~~~~~~~~~~~~~~~LkpgG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~g 778 (842)
|+++ .+++|++.+....+++++.++|||||.+++...... ..+..++.+.+.+ +|
T Consensus 111 i~~~~~~~~~~~~~~~~~~l~~~~~~l~~~G~l~~~~~~~~-----------------------~~~~~~~~~~l~~-~G 166 (195)
T 3cgg_A 111 IVSAGNVMGFLAEDGREPALANIHRALGADGRAVIGFGAGR-----------------------GWVFGDFLEVAER-VG 166 (195)
T ss_dssp EEECCCCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEETTS-----------------------SCCHHHHHHHHHH-HT
T ss_pred EEECCcHHhhcChHHHHHHHHHHHHHhCCCCEEEEEeCCCC-----------------------CcCHHHHHHHHHH-cC
Confidence 9998 789999877789999999999999999999653321 1356777777776 79
Q ss_pred cEEEEEEe
Q 035870 779 LCVEQVEN 786 (842)
Q Consensus 779 f~v~~~~~ 786 (842)
|++.....
T Consensus 167 f~~~~~~~ 174 (195)
T 3cgg_A 167 LELENAFE 174 (195)
T ss_dssp EEEEEEES
T ss_pred CEEeeeec
Confidence 99887754
No 128
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.59 E-value=3e-15 Score=150.06 Aligned_cols=106 Identities=18% Similarity=0.174 Sum_probs=89.4
Q ss_pred CCCeEEEeccCchHHHHHHHHh-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCC-c---cCCCccEEEEc
Q 035870 629 KGQEVLEIGCGWGTLAIEIVKR-TGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQL-A---KANKYDRIISC 703 (842)
Q Consensus 629 ~~~~vLDiGcG~G~~~~~la~~-~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~-~---~~~~fD~i~s~ 703 (842)
++.+|||||||+|.++..+|+. ++.+|+|+|+|+.+++.|+++++..++. +++++++|+.++ + ++++||.|+++
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~l~-nv~~~~~Da~~~l~~~~~~~~~d~v~~~ 112 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGLS-NLRVMCHDAVEVLHKMIPDNSLRMVQLF 112 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTTCS-SEEEECSCHHHHHHHHSCTTCEEEEEEE
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhCCC-cEEEEECCHHHHHHHHcCCCChheEEEe
Confidence 5779999999999999999987 6789999999999999999999999886 799999998874 2 56899999998
Q ss_pred chhhhcChhhH------HHHHHHHHhccccCcEEEEEe
Q 035870 704 EMIEAVGHEFM------EEFFGCCESLLAEDGLLVLQF 735 (842)
Q Consensus 704 ~~~~~~~~~~~------~~~~~~~~~~LkpgG~~~~~~ 735 (842)
....+...... +.+++++.++|||||.+++.+
T Consensus 113 ~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~t 150 (218)
T 3dxy_A 113 FPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMAT 150 (218)
T ss_dssp SCCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEe
Confidence 54433322111 369999999999999999965
No 129
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.59 E-value=2.4e-15 Score=158.44 Aligned_cols=153 Identities=17% Similarity=0.307 Sum_probs=108.7
Q ss_pred CCCeEEEeccCchHHHHHHHHh-cCCEEEEEcCCHHHHHHHHHHHHHcCCC-----------------------------
Q 035870 629 KGQEVLEIGCGWGTLAIEIVKR-TGCKYTGITLSEEQLKYAEMKVKEAGLQ----------------------------- 678 (842)
Q Consensus 629 ~~~~vLDiGcG~G~~~~~la~~-~~~~v~gid~s~~~~~~a~~~~~~~~l~----------------------------- 678 (842)
++.+|||||||+|.++..+++. ++.+|+|+|+|+.+++.|++++...+..
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRSC 125 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC-----------------------------------
T ss_pred CCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhcccccccccccccccccccccccccccc
Confidence 6889999999999999999998 4689999999999999999987665422
Q ss_pred ----------------------------CCeEEEEccccCCc------cCCCccEEEEcchhhhc----ChhhHHHHHHH
Q 035870 679 ----------------------------DLIRLYLCDYRQLA------KANKYDRIISCEMIEAV----GHEFMEEFFGC 720 (842)
Q Consensus 679 ----------------------------~~v~~~~~d~~~~~------~~~~fD~i~s~~~~~~~----~~~~~~~~~~~ 720 (842)
++|+++++|+.+.. .+++||+|+|..+++|+ +++.+..+|++
T Consensus 126 ~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l~~ 205 (292)
T 3g07_A 126 FPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMFRR 205 (292)
T ss_dssp ----------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHHHHH
T ss_pred ccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHHHHHH
Confidence 58999999987654 45899999999999888 55678999999
Q ss_pred HHhccccCcEEEEEeecCCCcccccccCcc-chhhhcccCCCCCCCHHHHHHHHhh-cCCcEEEEEEe
Q 035870 721 CESLLAEDGLLVLQFISIPDERYNEYRLSS-DFIKEYIFPGGCLPSLSRITSAMSV-ASRLCVEQVEN 786 (842)
Q Consensus 721 ~~~~LkpgG~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~p~~~~~~~~~~~~~~~~-~~gf~v~~~~~ 786 (842)
++++|||||++++...... .|....... .....|- .......++.+.+.+ .+||+...+..
T Consensus 206 ~~~~LkpGG~lil~~~~~~--~y~~~~~~~~~~~~~~~---~~~~~p~~~~~~L~~~~~GF~~~~~~~ 268 (292)
T 3g07_A 206 IYRHLRPGGILVLEPQPWS--SYGKRKTLTETIYKNYY---RIQLKPEQFSSYLTSPDVGFSSYELVA 268 (292)
T ss_dssp HHHHEEEEEEEEEECCCHH--HHHTTTTSCHHHHHHHH---HCCCCGGGHHHHHTSTTTCCCEEEEC-
T ss_pred HHHHhCCCcEEEEecCCch--hhhhhhcccHHHHhhhh---cEEEcHHHHHHHHHhcCCCceEEEEec
Confidence 9999999999999643211 111111111 1111111 011235667666664 47997665544
No 130
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.59 E-value=2e-14 Score=146.12 Aligned_cols=136 Identities=21% Similarity=0.217 Sum_probs=105.7
Q ss_pred HcCCCCCCeEEEeccC-chHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCc--cCCCccEE
Q 035870 624 KARVSKGQEVLEIGCG-WGTLAIEIVKRTGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLA--KANKYDRI 700 (842)
Q Consensus 624 ~l~~~~~~~vLDiGcG-~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~--~~~~fD~i 700 (842)
...++++.+|||+||| +|.++..+++..+.+|+|+|+|+.+++.|++++..+++ +++++++|+..+. ++++||+|
T Consensus 50 ~~~~~~~~~vLDlG~G~~G~~~~~la~~~~~~v~~vD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~~~~~~~fD~I 127 (230)
T 3evz_A 50 KTFLRGGEVALEIGTGHTAMMALMAEKFFNCKVTATEVDEEFFEYARRNIERNNS--NVRLVKSNGGIIKGVVEGTFDVI 127 (230)
T ss_dssp HTTCCSSCEEEEECCTTTCHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHTTC--CCEEEECSSCSSTTTCCSCEEEE
T ss_pred HhhcCCCCEEEEcCCCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHhCC--CcEEEeCCchhhhhcccCceeEE
Confidence 3346789999999999 99999999987678999999999999999999999987 7999999975443 45899999
Q ss_pred EEcchhhhcCh-----------------hhHHHHHHHHHhccccCcEEEEEeecCCCcccccccCccchhhhcccCCCCC
Q 035870 701 ISCEMIEAVGH-----------------EFMEEFFGCCESLLAEDGLLVLQFISIPDERYNEYRLSSDFIKEYIFPGGCL 763 (842)
Q Consensus 701 ~s~~~~~~~~~-----------------~~~~~~~~~~~~~LkpgG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~ 763 (842)
+++..+.+.++ +.+..+++++.++|||||++++......
T Consensus 128 ~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~------------------------ 183 (230)
T 3evz_A 128 FSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPDKE------------------------ 183 (230)
T ss_dssp EECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEESCH------------------------
T ss_pred EECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEecccH------------------------
Confidence 99977765433 2247899999999999999998533211
Q ss_pred CCHHHHHHHHhhcCCcEEEEEEe
Q 035870 764 PSLSRITSAMSVASRLCVEQVEN 786 (842)
Q Consensus 764 ~~~~~~~~~~~~~~gf~v~~~~~ 786 (842)
....++.+.+.+ .||++..++.
T Consensus 184 ~~~~~~~~~l~~-~g~~~~~~~~ 205 (230)
T 3evz_A 184 KLLNVIKERGIK-LGYSVKDIKF 205 (230)
T ss_dssp HHHHHHHHHHHH-TTCEEEEEEE
T ss_pred hHHHHHHHHHHH-cCCceEEEEe
Confidence 023455566665 7998776643
No 131
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.58 E-value=8.9e-15 Score=142.16 Aligned_cols=115 Identities=20% Similarity=0.208 Sum_probs=98.3
Q ss_pred HHHHHHHHHcCCCCCCeEEEeccCchHHHHHHHHh-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccC-Ccc
Q 035870 616 RKVSLLIEKARVSKGQEVLEIGCGWGTLAIEIVKR-TGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQ-LAK 693 (842)
Q Consensus 616 ~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~-~~~ 693 (842)
.....+++.+.+.++.+|||+|||+|.++..+++. ++.+|+++|+|+++++.|++++...++++++ ++++|..+ ++.
T Consensus 12 ~~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~~~~~~ 90 (178)
T 3hm2_A 12 HVRALAISALAPKPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRI-AVQQGAPRAFDD 90 (178)
T ss_dssp HHHHHHHHHHCCCTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTTGGGGG
T ss_pred HHHHHHHHHhcccCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchHhhhhc
Confidence 33456778888899999999999999999999988 5789999999999999999999999988789 88888754 332
Q ss_pred -CCCccEEEEcchhhhcChhhHHHHHHHHHhccccCcEEEEEeec
Q 035870 694 -ANKYDRIISCEMIEAVGHEFMEEFFGCCESLLAEDGLLVLQFIS 737 (842)
Q Consensus 694 -~~~fD~i~s~~~~~~~~~~~~~~~~~~~~~~LkpgG~~~~~~~~ 737 (842)
.++||+|++..+++| ..+++++.++|||||++++..+.
T Consensus 91 ~~~~~D~i~~~~~~~~------~~~l~~~~~~L~~gG~l~~~~~~ 129 (178)
T 3hm2_A 91 VPDNPDVIFIGGGLTA------PGVFAAAWKRLPVGGRLVANAVT 129 (178)
T ss_dssp CCSCCSEEEECC-TTC------TTHHHHHHHTCCTTCEEEEEECS
T ss_pred cCCCCCEEEECCcccH------HHHHHHHHHhcCCCCEEEEEeec
Confidence 279999999998887 57899999999999999987654
No 132
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.58 E-value=1.1e-14 Score=144.22 Aligned_cols=116 Identities=14% Similarity=0.145 Sum_probs=96.9
Q ss_pred HHcCCCCCCeEEEeccCchHHHHHHHHh--cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCc--cCCCcc
Q 035870 623 EKARVSKGQEVLEIGCGWGTLAIEIVKR--TGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLA--KANKYD 698 (842)
Q Consensus 623 ~~l~~~~~~~vLDiGcG~G~~~~~la~~--~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~--~~~~fD 698 (842)
....++++.+|||+|||+|.++..+++. +..+|+|+|+|+++++.|+++++..++.++++++++|+.+++ .+++||
T Consensus 16 ~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD 95 (197)
T 3eey_A 16 IKMFVKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDCPVK 95 (197)
T ss_dssp HHHHCCTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCCSCEE
T ss_pred HHhcCCCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhccCCce
Confidence 3445688999999999999999999998 457999999999999999999999988678999999988875 457899
Q ss_pred EEEEcchhhh-------cChhhHHHHHHHHHhccccCcEEEEEeecC
Q 035870 699 RIISCEMIEA-------VGHEFMEEFFGCCESLLAEDGLLVLQFISI 738 (842)
Q Consensus 699 ~i~s~~~~~~-------~~~~~~~~~~~~~~~~LkpgG~~~~~~~~~ 738 (842)
+|+++..+.. ...+....+++++.++|||||++++..+..
T Consensus 96 ~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~ 142 (197)
T 3eey_A 96 AVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIYYG 142 (197)
T ss_dssp EEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEECCB
T ss_pred EEEEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEccC
Confidence 9999875511 112245679999999999999999976543
No 133
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.58 E-value=1.7e-14 Score=149.93 Aligned_cols=165 Identities=9% Similarity=0.090 Sum_probs=121.2
Q ss_pred HHHHHHHHHHHHHHHcC-CCCCCeEEEeccCc---hHHHHHHHHh-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEE
Q 035870 610 LKAAQMRKVSLLIEKAR-VSKGQEVLEIGCGW---GTLAIEIVKR-TGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLY 684 (842)
Q Consensus 610 l~~aq~~~~~~l~~~l~-~~~~~~vLDiGcG~---G~~~~~la~~-~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~ 684 (842)
...+++..++.+++.+. ..+..+|||||||+ |.++..+++. ++.+|+++|+|+.|++.|++++.. .++++++
T Consensus 57 ~a~~~~~~~~~~~~~l~~~~~~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~---~~~v~~~ 133 (274)
T 2qe6_A 57 SAIENRKVLVRGVRFLAGEAGISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLAK---DPNTAVF 133 (274)
T ss_dssp HHHHHHHHHHHHHHHHHTTTCCCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTT---CTTEEEE
T ss_pred HHHHHhHHHHHHHHHHhhccCCCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcCC---CCCeEEE
Confidence 44556667777777765 34457999999999 9887766665 678999999999999999999843 2489999
Q ss_pred EccccCCc------------cCCCccEEEEcchhhhcChhhHHHHHHHHHhccccCcEEEEEeecCCCcccccccCccch
Q 035870 685 LCDYRQLA------------KANKYDRIISCEMIEAVGHEFMEEFFGCCESLLAEDGLLVLQFISIPDERYNEYRLSSDF 752 (842)
Q Consensus 685 ~~d~~~~~------------~~~~fD~i~s~~~~~~~~~~~~~~~~~~~~~~LkpgG~~~~~~~~~~~~~~~~~~~~~~~ 752 (842)
++|+.+.. +.++||+|+++.+++|++++....++++++++|||||++++.+..... . .........
T Consensus 134 ~~D~~~~~~~~~~~~~~~~~d~~~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~pGG~l~i~~~~~~~-~-~~~~~~~~~ 211 (274)
T 2qe6_A 134 TADVRDPEYILNHPDVRRMIDFSRPAAIMLVGMLHYLSPDVVDRVVGAYRDALAPGSYLFMTSLVDTG-L-PAQQKLARI 211 (274)
T ss_dssp ECCTTCHHHHHHSHHHHHHCCTTSCCEEEETTTGGGSCTTTHHHHHHHHHHHSCTTCEEEEEEEBCSS-C-HHHHHHHHH
T ss_pred EeeCCCchhhhccchhhccCCCCCCEEEEEechhhhCCcHHHHHHHHHHHHhCCCCcEEEEEEecCcc-h-HHHHHHHHH
Confidence 99997631 124899999999999999877899999999999999999998876532 1 111111111
Q ss_pred hhhcccCCCCCCCHHHHHHHHhhcCCcEEEE
Q 035870 753 IKEYIFPGGCLPSLSRITSAMSVASRLCVEQ 783 (842)
Q Consensus 753 ~~~~i~p~~~~~~~~~~~~~~~~~~gf~v~~ 783 (842)
+.....| ....+.+++.+.+ .||++.+
T Consensus 212 ~~~~~~~-~~~~s~~ei~~~l---~G~~l~~ 238 (274)
T 2qe6_A 212 TRENLGE-GWARTPEEIERQF---GDFELVE 238 (274)
T ss_dssp HHHHHSC-CCCBCHHHHHHTT---TTCEECT
T ss_pred HHhcCCC-CccCCHHHHHHHh---CCCeEcc
Confidence 1111123 3556888887665 3887654
No 134
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.57 E-value=1.9e-14 Score=141.27 Aligned_cols=109 Identities=13% Similarity=0.142 Sum_probs=95.3
Q ss_pred CCCCeEEEeccCchHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCc---cCCCccEEEEcc
Q 035870 628 SKGQEVLEIGCGWGTLAIEIVKRTGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLA---KANKYDRIISCE 704 (842)
Q Consensus 628 ~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~---~~~~fD~i~s~~ 704 (842)
.++.+|||+|||+|.++..+++....+|+|+|+|+++++.|+++++.+++ ++++++++|+.++. ++++||+|+++.
T Consensus 43 ~~~~~vLDlgcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~~~~~~~~~fD~i~~~~ 121 (189)
T 3p9n_A 43 LTGLAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIARNIEALGL-SGATLRRGAVAAVVAAGTTSPVDLVLADP 121 (189)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTCSEEEEEECCHHHHHHHHHHHHHHTC-SCEEEEESCHHHHHHHCCSSCCSEEEECC
T ss_pred CCCCEEEEeCCCcCHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHcCC-CceEEEEccHHHHHhhccCCCccEEEECC
Confidence 57889999999999999988887556899999999999999999999988 58999999998865 268999999998
Q ss_pred hhhhcChhhHHHHHHHHHh--ccccCcEEEEEeecC
Q 035870 705 MIEAVGHEFMEEFFGCCES--LLAEDGLLVLQFISI 738 (842)
Q Consensus 705 ~~~~~~~~~~~~~~~~~~~--~LkpgG~~~~~~~~~ 738 (842)
.+++. .+.+..+++.+.+ +|||||+++++....
T Consensus 122 p~~~~-~~~~~~~l~~~~~~~~L~pgG~l~~~~~~~ 156 (189)
T 3p9n_A 122 PYNVD-SADVDAILAALGTNGWTREGTVAVVERATT 156 (189)
T ss_dssp CTTSC-HHHHHHHHHHHHHSSSCCTTCEEEEEEETT
T ss_pred CCCcc-hhhHHHHHHHHHhcCccCCCeEEEEEecCC
Confidence 87764 2358899999999 999999999977654
No 135
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.57 E-value=1e-14 Score=145.92 Aligned_cols=112 Identities=21% Similarity=0.143 Sum_probs=100.4
Q ss_pred HHHHHHHHHcCCCCCCeEEEeccCchHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCc-cC
Q 035870 616 RKVSLLIEKARVSKGQEVLEIGCGWGTLAIEIVKRTGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLA-KA 694 (842)
Q Consensus 616 ~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~-~~ 694 (842)
.....+++.+.++++.+|||||||+|.++..+++. +.+|+++|+|+++++.|++++...+++ +++++.+|..+.. .+
T Consensus 64 ~~~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~~~ 141 (210)
T 3lbf_A 64 YMVARMTELLELTPQSRVLEIGTGSGYQTAILAHL-VQHVCSVERIKGLQWQARRRLKNLDLH-NVSTRHGDGWQGWQAR 141 (210)
T ss_dssp HHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH-SSEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEESCGGGCCGGG
T ss_pred HHHHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCCC-ceEEEECCcccCCccC
Confidence 44567788888899999999999999999999998 889999999999999999999998887 7999999998765 56
Q ss_pred CCccEEEEcchhhhcChhhHHHHHHHHHhccccCcEEEEEeec
Q 035870 695 NKYDRIISCEMIEAVGHEFMEEFFGCCESLLAEDGLLVLQFIS 737 (842)
Q Consensus 695 ~~fD~i~s~~~~~~~~~~~~~~~~~~~~~~LkpgG~~~~~~~~ 737 (842)
++||+|++..+++|+++ ++.++|||||++++....
T Consensus 142 ~~~D~i~~~~~~~~~~~--------~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 142 APFDAIIVTAAPPEIPT--------ALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp CCEEEEEESSBCSSCCT--------HHHHTEEEEEEEEEEECS
T ss_pred CCccEEEEccchhhhhH--------HHHHhcccCcEEEEEEcC
Confidence 79999999999999875 478999999999997655
No 136
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.57 E-value=1.9e-14 Score=135.70 Aligned_cols=104 Identities=12% Similarity=0.179 Sum_probs=89.4
Q ss_pred CCCCeEEEeccCchHHHHHHHHh-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCccCCCccEEEEcchh
Q 035870 628 SKGQEVLEIGCGWGTLAIEIVKR-TGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLAKANKYDRIISCEMI 706 (842)
Q Consensus 628 ~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~~~fD~i~s~~~~ 706 (842)
.+.++|||||||||.++..++.. ++++|+++|+|+.|++.+++++..+|+..++++ .|....++.++||+|++..++
T Consensus 48 ~~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~--~d~~~~~~~~~~DvVLa~k~L 125 (200)
T 3fzg_A 48 KHVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRF--LNKESDVYKGTYDVVFLLKML 125 (200)
T ss_dssp CCCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSCCSSEEEE--ECCHHHHTTSEEEEEEEETCH
T ss_pred CCCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCccEEE--ecccccCCCCCcChhhHhhHH
Confidence 56779999999999999999877 778999999999999999999999998766666 666554566889999999999
Q ss_pred hhcChhhHHHHHHHHHhccccCcEEEEEe
Q 035870 707 EAVGHEFMEEFFGCCESLLAEDGLLVLQF 735 (842)
Q Consensus 707 ~~~~~~~~~~~~~~~~~~LkpgG~~~~~~ 735 (842)
|++ + +.+..+..+.+.|||||.++-..
T Consensus 126 HlL-~-~~~~al~~v~~~L~pggvfISfp 152 (200)
T 3fzg_A 126 PVL-K-QQDVNILDFLQLFHTQNFVISFP 152 (200)
T ss_dssp HHH-H-HTTCCHHHHHHTCEEEEEEEEEE
T ss_pred Hhh-h-hhHHHHHHHHHHhCCCCEEEEeC
Confidence 999 3 35666779999999999988754
No 137
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.55 E-value=3.4e-14 Score=153.60 Aligned_cols=167 Identities=14% Similarity=0.085 Sum_probs=131.0
Q ss_pred HHHHHHHcCCCCCCeEEEeccCchHHHHHHHHh-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCccCCC
Q 035870 618 VSLLIEKARVSKGQEVLEIGCGWGTLAIEIVKR-TGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLAKANK 696 (842)
Q Consensus 618 ~~~l~~~l~~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~~~ 696 (842)
...+++..++.+..+|||||||+|.++..++++ ++.+++..|+ +++++.|++++...+ .++|+++.+|+.+.+. ..
T Consensus 168 ~~~~~~~~~~~~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl-p~v~~~a~~~~~~~~-~~rv~~~~gD~~~~~~-~~ 244 (353)
T 4a6d_A 168 GRSVLTAFDLSVFPLMCDLGGGAGALAKECMSLYPGCKITVFDI-PEVVWTAKQHFSFQE-EEQIDFQEGDFFKDPL-PE 244 (353)
T ss_dssp HHHHHHSSCGGGCSEEEEETCTTSHHHHHHHHHCSSCEEEEEEC-HHHHHHHHHHSCC---CCSEEEEESCTTTSCC-CC
T ss_pred HHHHHHhcCcccCCeEEeeCCCCCHHHHHHHHhCCCceeEeccC-HHHHHHHHHhhhhcc-cCceeeecCccccCCC-CC
Confidence 345667777788889999999999999999998 7889999998 889999998876544 5699999999876543 46
Q ss_pred ccEEEEcchhhhcChhhHHHHHHHHHhccccCcEEEEEeecCCCcccccccCccchhhhcccCCCCCCCHHHHHHHHhhc
Q 035870 697 YDRIISCEMIEAVGHEFMEEFFGCCESLLAEDGLLVLQFISIPDERYNEYRLSSDFIKEYIFPGGCLPSLSRITSAMSVA 776 (842)
Q Consensus 697 fD~i~s~~~~~~~~~~~~~~~~~~~~~~LkpgG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~ 776 (842)
+|+|++..++|+.++++...+++++++.|+|||+++|.+...++..........--+.-....+|...|..++.+.+++
T Consensus 245 ~D~~~~~~vlh~~~d~~~~~iL~~~~~al~pgg~lli~e~~~~~~~~~~~~~~~~dl~ml~~~~g~ert~~e~~~ll~~- 323 (353)
T 4a6d_A 245 ADLYILARVLHDWADGKCSHLLERIYHTCKPGGGILVIESLLDEDRRGPLLTQLYSLNMLVQTEGQERTPTHYHMLLSS- 323 (353)
T ss_dssp CSEEEEESSGGGSCHHHHHHHHHHHHHHCCTTCEEEEEECCCCTTSCCCHHHHHHHHHHHHSSSCCCCCHHHHHHHHHH-
T ss_pred ceEEEeeeecccCCHHHHHHHHHHHHhhCCCCCEEEEEEeeeCCCCCCCHHHHHHHHHHHHhCCCcCCCHHHHHHHHHH-
Confidence 8999999999999998889999999999999999999988766543221111000111123456777899999888887
Q ss_pred CCcEEEEEEecC
Q 035870 777 SRLCVEQVENIG 788 (842)
Q Consensus 777 ~gf~v~~~~~~~ 788 (842)
+||+++++...+
T Consensus 324 AGf~~v~v~~~~ 335 (353)
T 4a6d_A 324 AGFRDFQFKKTG 335 (353)
T ss_dssp HTCEEEEEECCS
T ss_pred CCCceEEEEEcC
Confidence 899998887654
No 138
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.55 E-value=1.2e-14 Score=144.80 Aligned_cols=143 Identities=13% Similarity=0.097 Sum_probs=105.9
Q ss_pred HHcCCCCCCeEEEeccCchHHHHHHHHh--cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCc----cCCC
Q 035870 623 EKARVSKGQEVLEIGCGWGTLAIEIVKR--TGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLA----KANK 696 (842)
Q Consensus 623 ~~l~~~~~~~vLDiGcG~G~~~~~la~~--~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~----~~~~ 696 (842)
+.+.++||++|||+|||+|.++.++|+. +..+|+|+|+|++|++.+++++++.+ ++..+..|..+.. ..+.
T Consensus 71 ~~l~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~---ni~~V~~d~~~p~~~~~~~~~ 147 (233)
T 4df3_A 71 IELPVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRR---NIFPILGDARFPEKYRHLVEG 147 (233)
T ss_dssp SCCCCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCT---TEEEEESCTTCGGGGTTTCCC
T ss_pred hhcCCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhc---CeeEEEEeccCccccccccce
Confidence 4567899999999999999999999998 56799999999999999998876543 8999999986643 4578
Q ss_pred ccEEEEcchhhhcChhhHHHHHHHHHhccccCcEEEEEeecCCCcccccccCccchhhhcccCCCCCCCHHHHHHHHhhc
Q 035870 697 YDRIISCEMIEAVGHEFMEEFFGCCESLLAEDGLLVLQFISIPDERYNEYRLSSDFIKEYIFPGGCLPSLSRITSAMSVA 776 (842)
Q Consensus 697 fD~i~s~~~~~~~~~~~~~~~~~~~~~~LkpgG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~ 776 (842)
+|+|++.. .|.. +...+++++++.|||||++++.......... . |. .....+..+.+.+
T Consensus 148 vDvVf~d~--~~~~--~~~~~l~~~~r~LKpGG~lvI~ik~r~~d~~----~----------p~--~~~~~~ev~~L~~- 206 (233)
T 4df3_A 148 VDGLYADV--AQPE--QAAIVVRNARFFLRDGGYMLMAIKARSIDVT----T----------EP--SEVYKREIKTLMD- 206 (233)
T ss_dssp EEEEEECC--CCTT--HHHHHHHHHHHHEEEEEEEEEEEECCHHHHH----T----------CC--CHHHHHHHHHHHH-
T ss_pred EEEEEEec--cCCh--hHHHHHHHHHHhccCCCEEEEEEecccCCCC----C----------Ch--HHHHHHHHHHHHH-
Confidence 99998743 3333 3688999999999999999986422211100 0 00 0012334455665
Q ss_pred CCcEEEEEEecCc
Q 035870 777 SRLCVEQVENIGI 789 (842)
Q Consensus 777 ~gf~v~~~~~~~~ 789 (842)
+||++.+..++.+
T Consensus 207 ~GF~l~e~i~L~p 219 (233)
T 4df3_A 207 GGLEIKDVVHLDP 219 (233)
T ss_dssp TTCCEEEEEECTT
T ss_pred CCCEEEEEEccCC
Confidence 8999988887754
No 139
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.55 E-value=9.8e-15 Score=154.75 Aligned_cols=124 Identities=17% Similarity=0.202 Sum_probs=103.0
Q ss_pred HHHHHHHHHHcCCCCCCeEEEeccCchHHHHHHHHhcCC-EEEEEcCCHHHHHHHHHHH-------HHcCC-CCCeEEEE
Q 035870 615 MRKVSLLIEKARVSKGQEVLEIGCGWGTLAIEIVKRTGC-KYTGITLSEEQLKYAEMKV-------KEAGL-QDLIRLYL 685 (842)
Q Consensus 615 ~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~-~v~gid~s~~~~~~a~~~~-------~~~~l-~~~v~~~~ 685 (842)
...+..+++.+.++++++|||||||+|.+++.+|...++ +|+|||+|+.+++.|++++ +..|+ .++|+|++
T Consensus 159 ~~~i~~il~~l~l~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~ 238 (438)
T 3uwp_A 159 FDLVAQMIDEIKMTDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLER 238 (438)
T ss_dssp HHHHHHHHHHHCCCTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEE
T ss_pred HHHHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEE
Confidence 456678899999999999999999999999999987566 5999999999999998754 44566 35899999
Q ss_pred ccccCCc-cC--CCccEEEEcchhhhcChhhHHHHHHHHHhccccCcEEEEEeecCCCc
Q 035870 686 CDYRQLA-KA--NKYDRIISCEMIEAVGHEFMEEFFGCCESLLAEDGLLVLQFISIPDE 741 (842)
Q Consensus 686 ~d~~~~~-~~--~~fD~i~s~~~~~~~~~~~~~~~~~~~~~~LkpgG~~~~~~~~~~~~ 741 (842)
+|+.+++ .+ ..||+|+++..+. . .+....|+++.++|||||++++.....+..
T Consensus 239 GD~~~lp~~d~~~~aDVVf~Nn~~F-~--pdl~~aL~Ei~RvLKPGGrIVssE~f~p~d 294 (438)
T 3uwp_A 239 GDFLSEEWRERIANTSVIFVNNFAF-G--PEVDHQLKERFANMKEGGRIVSSKPFAPLN 294 (438)
T ss_dssp CCTTSHHHHHHHHTCSEEEECCTTC-C--HHHHHHHHHHHTTSCTTCEEEESSCSSCTT
T ss_pred CcccCCccccccCCccEEEEccccc-C--chHHHHHHHHHHcCCCCcEEEEeecccCCC
Confidence 9999887 22 4799999987753 2 347888999999999999999987666654
No 140
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.55 E-value=2.8e-14 Score=146.80 Aligned_cols=157 Identities=19% Similarity=0.231 Sum_probs=115.7
Q ss_pred HhccCCCCcccccccCCCcccHHHHHHHHHHHHHHHcCCCCCCeEEEeccCchHHHHHHHHhcCCEEEEEcCCHHHHHHH
Q 035870 589 SLFLDESMTYSCAVFKSEDEDLKAAQMRKVSLLIEKARVSKGQEVLEIGCGWGTLAIEIVKRTGCKYTGITLSEEQLKYA 668 (842)
Q Consensus 589 ~~~l~~~~~ys~~~~~~~~~~l~~aq~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a 668 (842)
...+++.+.|..+.... . ...+ ..+... ++++.+|||+|||+|.+++.+++. +.+|+|+|+|+.+++.|
T Consensus 90 ~~~l~p~~~fgtg~~~t-----t---~~~~-~~l~~~-~~~~~~VLDiGcG~G~l~~~la~~-g~~v~gvDi~~~~v~~a 158 (254)
T 2nxc_A 90 PLVIEPGMAFGTGHHET-----T---RLAL-KALARH-LRPGDKVLDLGTGSGVLAIAAEKL-GGKALGVDIDPMVLPQA 158 (254)
T ss_dssp EEECCCC-----CCSHH-----H---HHHH-HHHHHH-CCTTCEEEEETCTTSHHHHHHHHT-TCEEEEEESCGGGHHHH
T ss_pred EEEECCCccccCCCCHH-----H---HHHH-HHHHHh-cCCCCEEEEecCCCcHHHHHHHHh-CCeEEEEECCHHHHHHH
Confidence 45677777765554321 1 1122 223333 568899999999999999999887 66999999999999999
Q ss_pred HHHHHHcCCCCCeEEEEccccCCccCCCccEEEEcchhhhcChhhHHHHHHHHHhccccCcEEEEEeecCCCcccccccC
Q 035870 669 EMKVKEAGLQDLIRLYLCDYRQLAKANKYDRIISCEMIEAVGHEFMEEFFGCCESLLAEDGLLVLQFISIPDERYNEYRL 748 (842)
Q Consensus 669 ~~~~~~~~l~~~v~~~~~d~~~~~~~~~fD~i~s~~~~~~~~~~~~~~~~~~~~~~LkpgG~~~~~~~~~~~~~~~~~~~ 748 (842)
++++..+++. +++.++|+.+..++++||+|+++...++ ...+++++.++|||||++++..+...
T Consensus 159 ~~n~~~~~~~--v~~~~~d~~~~~~~~~fD~Vv~n~~~~~-----~~~~l~~~~~~LkpgG~lils~~~~~--------- 222 (254)
T 2nxc_A 159 EANAKRNGVR--PRFLEGSLEAALPFGPFDLLVANLYAEL-----HAALAPRYREALVPGGRALLTGILKD--------- 222 (254)
T ss_dssp HHHHHHTTCC--CEEEESCHHHHGGGCCEEEEEEECCHHH-----HHHHHHHHHHHEEEEEEEEEEEEEGG---------
T ss_pred HHHHHHcCCc--EEEEECChhhcCcCCCCCEEEECCcHHH-----HHHHHHHHHHHcCCCCEEEEEeeccC---------
Confidence 9999998875 8999999876333578999999876554 57899999999999999999755321
Q ss_pred ccchhhhcccCCCCCCCHHHHHHHHhhcCCcEEEEEEecCc
Q 035870 749 SSDFIKEYIFPGGCLPSLSRITSAMSVASRLCVEQVENIGI 789 (842)
Q Consensus 749 ~~~~~~~~i~p~~~~~~~~~~~~~~~~~~gf~v~~~~~~~~ 789 (842)
...++.+.+.+ +||++......+.
T Consensus 223 ----------------~~~~v~~~l~~-~Gf~~~~~~~~~~ 246 (254)
T 2nxc_A 223 ----------------RAPLVREAMAG-AGFRPLEEAAEGE 246 (254)
T ss_dssp ----------------GHHHHHHHHHH-TTCEEEEEEEETT
T ss_pred ----------------CHHHHHHHHHH-CCCEEEEEeccCC
Confidence 24566666766 8999988776543
No 141
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.55 E-value=5.2e-14 Score=159.84 Aligned_cols=120 Identities=20% Similarity=0.265 Sum_probs=101.7
Q ss_pred HHHHHHHHcCCCCCCeEEEeccCchHHHHHHHHhcC--CEEEEEcCCHHHHHHHHHHHHHc------CCCCCeEEEEccc
Q 035870 617 KVSLLIEKARVSKGQEVLEIGCGWGTLAIEIVKRTG--CKYTGITLSEEQLKYAEMKVKEA------GLQDLIRLYLCDY 688 (842)
Q Consensus 617 ~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~--~~v~gid~s~~~~~~a~~~~~~~------~l~~~v~~~~~d~ 688 (842)
.++.+++.+...++.+|||||||+|.++..+++..+ .+|+|+|+|+.|++.|++++... ++. +++++++|+
T Consensus 709 Rle~LLelL~~~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~-nVefiqGDa 787 (950)
T 3htx_A 709 RVEYALKHIRESSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVK-SATLYDGSI 787 (950)
T ss_dssp HHHHHHHHHHHSCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCS-EEEEEESCT
T ss_pred HHHHHHHHhcccCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCC-ceEEEECch
Confidence 344556666556889999999999999999998832 79999999999999999987643 443 799999999
Q ss_pred cCCc-cCCCccEEEEcchhhhcChhhHHHHHHHHHhccccCcEEEEEeecC
Q 035870 689 RQLA-KANKYDRIISCEMIEAVGHEFMEEFFGCCESLLAEDGLLVLQFISI 738 (842)
Q Consensus 689 ~~~~-~~~~fD~i~s~~~~~~~~~~~~~~~~~~~~~~LkpgG~~~~~~~~~ 738 (842)
.+++ .+++||+|++..+++|+++.....+++++.++|||| .+++.++..
T Consensus 788 ~dLp~~d~sFDlVV~~eVLeHL~dp~l~~~L~eI~RvLKPG-~LIISTPN~ 837 (950)
T 3htx_A 788 LEFDSRLHDVDIGTCLEVIEHMEEDQACEFGEKVLSLFHPK-LLIVSTPNY 837 (950)
T ss_dssp TSCCTTSCSCCEEEEESCGGGSCHHHHHHHHHHHHHTTCCS-EEEEEECBG
T ss_pred HhCCcccCCeeEEEEeCchhhCChHHHHHHHHHHHHHcCCC-EEEEEecCc
Confidence 9998 668999999999999999877778999999999999 777766543
No 142
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.55 E-value=4.3e-14 Score=139.27 Aligned_cols=118 Identities=25% Similarity=0.424 Sum_probs=103.4
Q ss_pred HHHHHHcCCCCCCeEEEeccCchHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHHcCCCC-CeEEEEccccCCccCCCc
Q 035870 619 SLLIEKARVSKGQEVLEIGCGWGTLAIEIVKRTGCKYTGITLSEEQLKYAEMKVKEAGLQD-LIRLYLCDYRQLAKANKY 697 (842)
Q Consensus 619 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~~l~~-~v~~~~~d~~~~~~~~~f 697 (842)
+.+++.+..+++.+|||+|||+|.++..+++. +.+|+++|+|+.+++.+++++...++++ +++++++|+.+..++++|
T Consensus 42 ~~l~~~~~~~~~~~vLdiG~G~G~~~~~~~~~-~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 120 (194)
T 1dus_A 42 KILVENVVVDKDDDILDLGCGYGVIGIALADE-VKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENVKDRKY 120 (194)
T ss_dssp HHHHHHCCCCTTCEEEEETCTTSHHHHHHGGG-SSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTCTTSCE
T ss_pred HHHHHHcccCCCCeEEEeCCCCCHHHHHHHHc-CCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhcccccCCc
Confidence 46778888889999999999999999999998 8899999999999999999999888864 499999998876556789
Q ss_pred cEEEEcchhhhcChhhHHHHHHHHHhccccCcEEEEEeecC
Q 035870 698 DRIISCEMIEAVGHEFMEEFFGCCESLLAEDGLLVLQFISI 738 (842)
Q Consensus 698 D~i~s~~~~~~~~~~~~~~~~~~~~~~LkpgG~~~~~~~~~ 738 (842)
|+|+++.++++. .+....+++++.++|||||.+++.....
T Consensus 121 D~v~~~~~~~~~-~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 160 (194)
T 1dus_A 121 NKIITNPPIRAG-KEVLHRIIEEGKELLKDNGEIWVVIQTK 160 (194)
T ss_dssp EEEEECCCSTTC-HHHHHHHHHHHHHHEEEEEEEEEEEEST
T ss_pred eEEEECCCcccc-hhHHHHHHHHHHHHcCCCCEEEEEECCC
Confidence 999999887763 3457899999999999999999976643
No 143
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.55 E-value=1.5e-14 Score=148.65 Aligned_cols=151 Identities=15% Similarity=0.060 Sum_probs=114.5
Q ss_pred CCCCCeEEEeccCchHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCcc------CCCccEE
Q 035870 627 VSKGQEVLEIGCGWGTLAIEIVKRTGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLAK------ANKYDRI 700 (842)
Q Consensus 627 ~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~------~~~fD~i 700 (842)
++++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.|+++.. ..+++++++|+.+++. ...||+|
T Consensus 54 ~~~~~~vLD~GcG~G~~~~~la~~-~~~v~gvD~s~~~~~~a~~~~~----~~~~~~~~~d~~~~~~~~~~~~~~~~d~v 128 (245)
T 3ggd_A 54 FNPELPLIDFACGNGTQTKFLSQF-FPRVIGLDVSKSALEIAAKENT----AANISYRLLDGLVPEQAAQIHSEIGDANI 128 (245)
T ss_dssp SCTTSCEEEETCTTSHHHHHHHHH-SSCEEEEESCHHHHHHHHHHSC----CTTEEEEECCTTCHHHHHHHHHHHCSCEE
T ss_pred cCCCCeEEEEcCCCCHHHHHHHHh-CCCEEEEECCHHHHHHHHHhCc----ccCceEEECcccccccccccccccCccEE
Confidence 578899999999999999999998 5699999999999999998862 2379999999988651 1359999
Q ss_pred EEcchhhhcChhhHHHHHHHHHhccccCcEEEEEeecCCCccccc-c----cCccchh----hhcccCCCCCCCHHHHHH
Q 035870 701 ISCEMIEAVGHEFMEEFFGCCESLLAEDGLLVLQFISIPDERYNE-Y----RLSSDFI----KEYIFPGGCLPSLSRITS 771 (842)
Q Consensus 701 ~s~~~~~~~~~~~~~~~~~~~~~~LkpgG~~~~~~~~~~~~~~~~-~----~~~~~~~----~~~i~p~~~~~~~~~~~~ 771 (842)
+++.+++|++.++...+++++.++|||||++++.++..++..+.. . ......+ ..-..|+ ..+.+++.+
T Consensus 129 ~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 206 (245)
T 3ggd_A 129 YMRTGFHHIPVEKRELLGQSLRILLGKQGAMYLIELGTGCIDFFNSLLEKYGQLPYELLLVMEHGIRPG--IFTAEDIEL 206 (245)
T ss_dssp EEESSSTTSCGGGHHHHHHHHHHHHTTTCEEEEEEECTTHHHHHHHHHHHHSSCCHHHHHHHTTTCCCC--CCCHHHHHH
T ss_pred EEcchhhcCCHHHHHHHHHHHHHHcCCCCEEEEEeCCccccHHHHHHHhCCCCCchhhhhccccCCCCC--ccCHHHHHH
Confidence 999999999977799999999999999999999887765432110 0 0001111 1111121 247788877
Q ss_pred HHhhcCCcEEEEEEec
Q 035870 772 AMSVASRLCVEQVENI 787 (842)
Q Consensus 772 ~~~~~~gf~v~~~~~~ 787 (842)
.+ +||+++.....
T Consensus 207 ~~---aGf~~~~~~~~ 219 (245)
T 3ggd_A 207 YF---PDFEILSQGEG 219 (245)
T ss_dssp HC---TTEEEEEEECC
T ss_pred Hh---CCCEEEecccc
Confidence 66 69999886654
No 144
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.54 E-value=3.8e-14 Score=146.86 Aligned_cols=142 Identities=18% Similarity=0.206 Sum_probs=108.8
Q ss_pred ccCchHHhhhhhhhhhcCChHHHHhccCCCCcccccccCCCcccHHHHHHHHHHHHHHHcCCCCCCeEEEeccCchHHHH
Q 035870 566 RQNTLTQARRNISRHYDLSNELFSLFLDESMTYSCAVFKSEDEDLKAAQMRKVSLLIEKARVSKGQEVLEIGCGWGTLAI 645 (842)
Q Consensus 566 ~~~~~~~~~~~i~~~Yd~~~~~~~~~l~~~~~ys~~~~~~~~~~l~~aq~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~ 645 (842)
..++.....+.++..||...+... . ....+.+..++..+. +++.+|||||||+|.++.
T Consensus 13 ~~~~~~~~~~~~a~~Yd~~~~~~~--------------------~-~~~~~~~~~~l~~~~-~~~~~vLDiGcG~G~~~~ 70 (260)
T 2avn_A 13 MKLRSWEFYDRIARAYDSMYETPK--------------------W-KLYHRLIGSFLEEYL-KNPCRVLDLGGGTGKWSL 70 (260)
T ss_dssp EECCHHHHHHHHHHHHGGGGCSHH--------------------H-HHHHHHHHHHHHHHC-CSCCEEEEETCTTCHHHH
T ss_pred hhhhhcchhhHHHHHHHHhccccc--------------------h-hHHHHHHHHHHHHhc-CCCCeEEEeCCCcCHHHH
Confidence 356677778888888875431110 0 112233334444432 378899999999999999
Q ss_pred HHHHhcCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCc-cCCCccEEEEcchhhhcChhhHHHHHHHHHhc
Q 035870 646 EIVKRTGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLA-KANKYDRIISCEMIEAVGHEFMEEFFGCCESL 724 (842)
Q Consensus 646 ~la~~~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~-~~~~fD~i~s~~~~~~~~~~~~~~~~~~~~~~ 724 (842)
.+++. +.+|+|+|+|+++++.|+++.. . .++++|+.+++ ++++||+|++..+++|+..+ +..+++++.++
T Consensus 71 ~l~~~-~~~v~gvD~s~~~l~~a~~~~~------~-~~~~~d~~~~~~~~~~fD~v~~~~~~~~~~~~-~~~~l~~~~~~ 141 (260)
T 2avn_A 71 FLQER-GFEVVLVDPSKEMLEVAREKGV------K-NVVEAKAEDLPFPSGAFEAVLALGDVLSYVEN-KDKAFSEIRRV 141 (260)
T ss_dssp HHHTT-TCEEEEEESCHHHHHHHHHHTC------S-CEEECCTTSCCSCTTCEEEEEECSSHHHHCSC-HHHHHHHHHHH
T ss_pred HHHHc-CCeEEEEeCCHHHHHHHHhhcC------C-CEEECcHHHCCCCCCCEEEEEEcchhhhcccc-HHHHHHHHHHH
Confidence 99987 8899999999999999998753 1 28899999887 67899999999888877433 89999999999
Q ss_pred cccCcEEEEEeecC
Q 035870 725 LAEDGLLVLQFISI 738 (842)
Q Consensus 725 LkpgG~~~~~~~~~ 738 (842)
|||||++++...+.
T Consensus 142 LkpgG~l~~~~~~~ 155 (260)
T 2avn_A 142 LVPDGLLIATVDNF 155 (260)
T ss_dssp EEEEEEEEEEEEBH
T ss_pred cCCCeEEEEEeCCh
Confidence 99999999987653
No 145
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=99.54 E-value=1.1e-13 Score=152.25 Aligned_cols=192 Identities=11% Similarity=0.070 Sum_probs=107.8
Q ss_pred hhHHHHHHHHHhhhcCceEEeCCCeeEEEeCCCcEEEEeCCCcEEeCCEEEEccChHHH--HHhhcCCCChHHHHhcccc
Q 035870 214 SHSYVNKVRKQLESWGCQIRTSSEVCSVLPADKGCTIVCGDGSREFYNSCVMALHAPDA--LKILGNQATFDETRILGAF 291 (842)
Q Consensus 214 ~~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VV~A~p~~~~--~~ll~~~~~~~~~~~l~~~ 291 (842)
...++..|.+.++++|++|+++++|++|..+++++.|++.+| ++.||+||+|+..+.. ...+... .+
T Consensus 153 ~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~~~~V~t~~g-~i~a~~VV~A~G~~s~~l~~~~g~~----------~~ 221 (381)
T 3nyc_A 153 TDALHQGYLRGIRRNQGQVLCNHEALEIRRVDGAWEVRCDAG-SYRAAVLVNAAGAWCDAIAGLAGVR----------PL 221 (381)
T ss_dssp HHHHHHHHHHHHHHTTCEEESSCCCCEEEEETTEEEEECSSE-EEEESEEEECCGGGHHHHHHHHTCC----------CC
T ss_pred HHHHHHHHHHHHHHCCCEEEcCCEEEEEEEeCCeEEEEeCCC-EEEcCEEEECCChhHHHHHHHhCCC----------CC
Confidence 468999999999999999999999999999988899999888 8999999999987642 2222210 01
Q ss_pred ceeece-EEEecCCC--CcCCC-CCCc--ceeeecccCCCceEEEEEcccc-c--CCC-C-----CCCCeEEecCCCCCC
Q 035870 292 QYVYSD-IFLHRDKR--FMPQN-PAAW--SAWNFLESFDSKVCLTYWLNVL-Q--NLG-E-----TSLPFLVTLNPDHVP 356 (842)
Q Consensus 292 ~~~~~~-v~l~~~~~--~~p~~-~~~~--~~~~~~~~~~~~~~v~~~~~~l-~--~l~-~-----~~~~~~~~l~~~~~~ 356 (842)
+..+.+ .++.++.+ ..+.. ...+ ....|.....+...+....... . +.. + .+.+.+..+ +....
T Consensus 222 ~~~p~rg~~~~~~~~~~~~~~~~p~~~~~~~~~y~~p~~g~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~ 300 (381)
T 3nyc_A 222 GLQPKRRSAFIFAPPPGIDCHDWPMLVSLDESFYLKPDAGMLLGSPANADPVEAHDVQPEQLDIATGMYLIEEA-TTLTI 300 (381)
T ss_dssp CCEEEEEEEEEECCCTTCCCTTCCEEEETTSSCEEEEETTEEEEECCCCEECCSSCCCCCHHHHHHHHHHHHHH-BSCCC
T ss_pred ceeeeEEEEEEECCCcCCCcCccceEEeCCCCEEEEeCCCcEEEeCCcCCCCCcccCCCChHHHHHHHHHHHhc-CCCcc
Confidence 222211 11222211 11110 0000 0011111111333332111100 0 000 0 000001111 11122
Q ss_pred cceeEEEEcCCCCCCHHHHHHHHhhhhhcCCCCeEEeccccCCCCCchhHhHHHHHHHHhcCCccc
Q 035870 357 EHTLLKWSTGHPVPSVAASKASLELDHIQGKRGIWFCGAYQGYGFHEDGLKAGMTAAHGVLGKSCT 422 (842)
Q Consensus 357 ~~~~~~w~~~~p~~~~~~~~~~~~~~~~~~~~~l~~aG~~~g~G~~e~A~~SG~~aA~~Il~~~~~ 422 (842)
..+...|...+|. +.+..+.+...+..+|||++.+|.|.|+ ..|..+|+.+|+.|++.+.+
T Consensus 301 ~~~~~~w~G~r~~----t~D~~p~ig~~~~~~~l~~a~G~~g~G~-~~ap~~g~~la~~i~g~~~~ 361 (381)
T 3nyc_A 301 RRPEHTWAGLRSF----VADGDLVAGYAANAEGFFWVAAQGGYGI-QTSAAMGEASAALIRHQPLP 361 (381)
T ss_dssp CCCSEEEEEEEEE----CTTSCCEEEECTTSTTEEEEECCTTCTT-TTHHHHHHHHHHHHTTCCCC
T ss_pred cceeeeeEEcccc----CCCCCceecCCCCCCCeEEEEcCCChhH-hhCHHHHHHHHHHHhCCCCC
Confidence 2355677664442 1122333344445689999999999999 89999999999999987743
No 146
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.54 E-value=4.7e-15 Score=150.90 Aligned_cols=105 Identities=17% Similarity=0.098 Sum_probs=88.9
Q ss_pred CCCCCeEEEeccCchHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCc---cCCCccEEEE-
Q 035870 627 VSKGQEVLEIGCGWGTLAIEIVKRTGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLA---KANKYDRIIS- 702 (842)
Q Consensus 627 ~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~---~~~~fD~i~s- 702 (842)
..+|.+|||||||+|..+..+++..+.+||+||+|+++++.|+++....+. +++++.+|+.++. ++++||.|+.
T Consensus 58 ~~~G~rVLdiG~G~G~~~~~~~~~~~~~v~~id~~~~~~~~a~~~~~~~~~--~~~~~~~~a~~~~~~~~~~~FD~i~~D 135 (236)
T 3orh_A 58 SSKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTH--KVIPLKGLWEDVAPTLPDGHFDGILYD 135 (236)
T ss_dssp TTTCEEEEEECCTTSHHHHHHTTSCEEEEEEEECCHHHHHHHHHHGGGCSS--EEEEEESCHHHHGGGSCTTCEEEEEEC
T ss_pred ccCCCeEEEECCCccHHHHHHHHhCCcEEEEEeCCHHHHHHHHHHHhhCCC--ceEEEeehHHhhcccccccCCceEEEe
Confidence 468899999999999999999987557999999999999999999887664 6899999987653 5688999975
Q ss_pred ----cchhhhcChhhHHHHHHHHHhccccCcEEEEEe
Q 035870 703 ----CEMIEAVGHEFMEEFFGCCESLLAEDGLLVLQF 735 (842)
Q Consensus 703 ----~~~~~~~~~~~~~~~~~~~~~~LkpgG~~~~~~ 735 (842)
...++|+.+ ++.++++++|+|||||+|++..
T Consensus 136 ~~~~~~~~~~~~~--~~~~~~e~~rvLkPGG~l~f~~ 170 (236)
T 3orh_A 136 TYPLSEETWHTHQ--FNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp CCCCBGGGTTTHH--HHHHHHTHHHHEEEEEEEEECC
T ss_pred eeecccchhhhcc--hhhhhhhhhheeCCCCEEEEEe
Confidence 455666654 8899999999999999998743
No 147
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.54 E-value=3.9e-14 Score=144.79 Aligned_cols=130 Identities=13% Similarity=0.180 Sum_probs=103.5
Q ss_pred CCCCCeEEEeccCchHHHHHHHHh-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCc-c---CCCccEEE
Q 035870 627 VSKGQEVLEIGCGWGTLAIEIVKR-TGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLA-K---ANKYDRII 701 (842)
Q Consensus 627 ~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~-~---~~~fD~i~ 701 (842)
++++.+|||||||+|.++..+++. ++.+|+|+|+|+++++.|+++++..+++ +++++++|+.+++ . +++||+|+
T Consensus 68 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~~~~~~~~fD~V~ 146 (240)
T 1xdz_A 68 FNQVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQLE-NTTFCHDRAETFGQRKDVRESYDIVT 146 (240)
T ss_dssp GGGCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCS-SEEEEESCHHHHTTCTTTTTCEEEEE
T ss_pred cCCCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCC-CEEEEeccHHHhcccccccCCccEEE
Confidence 357889999999999999999975 6789999999999999999999999886 6999999998765 2 57899999
Q ss_pred EcchhhhcChhhHHHHHHHHHhccccCcEEEEEeecCCCcccccccCccchhhhcccCCCCCCCHHHHHHHHhhcCCcEE
Q 035870 702 SCEMIEAVGHEFMEEFFGCCESLLAEDGLLVLQFISIPDERYNEYRLSSDFIKEYIFPGGCLPSLSRITSAMSVASRLCV 781 (842)
Q Consensus 702 s~~~~~~~~~~~~~~~~~~~~~~LkpgG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~gf~v 781 (842)
|..+ . .+..+++.+.++|||||++++....... ....++.+.+.+ .||++
T Consensus 147 ~~~~----~--~~~~~l~~~~~~LkpgG~l~~~~g~~~~-----------------------~~~~~~~~~l~~-~g~~~ 196 (240)
T 1xdz_A 147 ARAV----A--RLSVLSELCLPLVKKNGLFVALKAASAE-----------------------EELNAGKKAITT-LGGEL 196 (240)
T ss_dssp EECC----S--CHHHHHHHHGGGEEEEEEEEEEECC-CH-----------------------HHHHHHHHHHHH-TTEEE
T ss_pred Eecc----C--CHHHHHHHHHHhcCCCCEEEEEeCCCch-----------------------HHHHHHHHHHHH-cCCeE
Confidence 9763 3 3789999999999999999885211100 012345555665 79988
Q ss_pred EEEEec
Q 035870 782 EQVENI 787 (842)
Q Consensus 782 ~~~~~~ 787 (842)
.....+
T Consensus 197 ~~~~~~ 202 (240)
T 1xdz_A 197 ENIHSF 202 (240)
T ss_dssp EEEEEE
T ss_pred eEEEEE
Confidence 777654
No 148
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.54 E-value=6.8e-14 Score=144.71 Aligned_cols=114 Identities=18% Similarity=0.252 Sum_probs=96.3
Q ss_pred HHHHcCCC-CCCeEEEeccCchHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCc---cCCC
Q 035870 621 LIEKARVS-KGQEVLEIGCGWGTLAIEIVKRTGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLA---KANK 696 (842)
Q Consensus 621 l~~~l~~~-~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~---~~~~ 696 (842)
+...+.++ ++.+|||+|||+|.++..+++....+|+|+|+|+.+++.|++++..+++.++++++++|+.++. ++++
T Consensus 40 l~~~~~~~~~~~~vLDlG~G~G~~~~~la~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~~~~~~ 119 (259)
T 3lpm_A 40 LAKFSYLPIRKGKIIDLCSGNGIIPLLLSTRTKAKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLIPKER 119 (259)
T ss_dssp HHHHCCCCSSCCEEEETTCTTTHHHHHHHTTCCCEEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGTSCTTC
T ss_pred HHHHhcCCCCCCEEEEcCCchhHHHHHHHHhcCCcEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhhhccCC
Confidence 44556677 8999999999999999999998555999999999999999999999999888999999998876 2689
Q ss_pred ccEEEEcchhhhc------------------ChhhHHHHHHHHHhccccCcEEEEE
Q 035870 697 YDRIISCEMIEAV------------------GHEFMEEFFGCCESLLAEDGLLVLQ 734 (842)
Q Consensus 697 fD~i~s~~~~~~~------------------~~~~~~~~~~~~~~~LkpgG~~~~~ 734 (842)
||+|+++..+.+. ....+..+++.+.++|||||++++.
T Consensus 120 fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 175 (259)
T 3lpm_A 120 ADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFV 175 (259)
T ss_dssp EEEEEECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ccEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEE
Confidence 9999998765443 1123578999999999999999984
No 149
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=99.54 E-value=8e-17 Score=165.13 Aligned_cols=188 Identities=16% Similarity=0.197 Sum_probs=128.1
Q ss_pred HHHHHHHHcCCCCCCeEEEeccCchHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCc-c-C
Q 035870 617 KVSLLIEKARVSKGQEVLEIGCGWGTLAIEIVKRTGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLA-K-A 694 (842)
Q Consensus 617 ~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~-~-~ 694 (842)
..+.+++.+.+.++.+|||||||+|.++..+++. +.+|+|+|+|+++++.|++++. ..++++++++|+.+++ + +
T Consensus 17 ~~~~i~~~~~~~~~~~VLDiG~G~G~~~~~l~~~-~~~v~~id~~~~~~~~a~~~~~---~~~~v~~~~~D~~~~~~~~~ 92 (245)
T 1yub_A 17 VLNQIIKQLNLKETDTVYEIGTGKGHLTTKLAKI-SKQVTSIELDSHLFNLSSEKLK---LNTRVTLIHQDILQFQFPNK 92 (245)
T ss_dssp THHHHHHHCCCCSSEEEEECSCCCSSCSHHHHHH-SSEEEESSSSCSSSSSSSCTTT---TCSEEEECCSCCTTTTCCCS
T ss_pred HHHHHHHhcCCCCCCEEEEEeCCCCHHHHHHHHh-CCeEEEEECCHHHHHHHHHHhc---cCCceEEEECChhhcCcccC
Confidence 4567888888889999999999999999999998 6899999999999999988765 2348999999999887 3 3
Q ss_pred CCccEEEEcch-----------hhhcChhhHHHHH----HHHHhccccCcEEEEEeecCCCcccccccCccchhhhcccC
Q 035870 695 NKYDRIISCEM-----------IEAVGHEFMEEFF----GCCESLLAEDGLLVLQFISIPDERYNEYRLSSDFIKEYIFP 759 (842)
Q Consensus 695 ~~fD~i~s~~~-----------~~~~~~~~~~~~~----~~~~~~LkpgG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~p 759 (842)
++| .|+++.. ++|... ...++ +.+.++|||||.+.+..... ....+..+++|
T Consensus 93 ~~f-~vv~n~Py~~~~~~~~~~~~~~~~--~~~~lm~q~e~a~rll~~~G~l~v~~~~~----------~~~~~~~~v~~ 159 (245)
T 1yub_A 93 QRY-KIVGNIPYHLSTQIIKKVVFESRA--SDIYLIVEEGFYKRTLDIHRTLGLLLHTQ----------VSIQQLLKLPA 159 (245)
T ss_dssp SEE-EEEEECCSSSCHHHHHHHHHHCCC--EEEEEEEESSHHHHHHCGGGSHHHHTTTT----------BCCCEEEEECC
T ss_pred CCc-EEEEeCCccccHHHHHHHHhCCCC--CeEEEEeeHHHHHHHhCCCCchhhhheeh----------eeEEEEEEECc
Confidence 678 7777642 222111 23444 67999999999987733211 11223345566
Q ss_pred CCCCCCHHHHHHHHhhcCCcEEEEEEe--------cCccHHHHHHHHH--------------HHHH-HhHHHHHhccCCH
Q 035870 760 GGCLPSLSRITSAMSVASRLCVEQVEN--------IGIHYYQTLRCWR--------------KNFM-EKQSKILALGFND 816 (842)
Q Consensus 760 ~~~~~~~~~~~~~~~~~~gf~v~~~~~--------~~~~y~~tl~~w~--------------~~~~-~~~~~~~~~g~~~ 816 (842)
++..|.+.. .-.+..... -..+|..+++.|. +++. ..+..+..+. .|
T Consensus 160 ~~f~P~p~v---------~s~~v~~~~~~~~~~~~~~~~~~~~~~~~f~~rrk~l~~~~~~~~~~~~~~~~r~~~l~-~~ 229 (245)
T 1yub_A 160 ECFHPKPKV---------NSVLIKLTRHTTDVPDKYWKLYTYFVSKWVNREYRQLFTKNQFHQAMKHAKVNNLSTIT-YE 229 (245)
T ss_dssp TTSBSSCCS---------CEEEEEECBCSCSSCHHHHHHHHHHHHHHHHTCHHHHCSSSHHHHHHHHTTCSCTTSCC-SH
T ss_pred hhccCCCCc---------eEEEEEEEECCCCCCcccHHHHHHHHHHHHhhcchhhhchHHHHHHcCCCCCCChhhCC-HH
Confidence 666665211 111221111 1235889999985 3332 1222333444 39
Q ss_pred HHHHHHHHHHHHHHH
Q 035870 817 KFIRTWEYYFDYCAA 831 (842)
Q Consensus 817 ~~~r~w~~y~~~~~~ 831 (842)
.|.|+|++|+++|++
T Consensus 230 ~f~~l~~~~~~~~~~ 244 (245)
T 1yub_A 230 QVLSIFNSYLLFNGR 244 (245)
T ss_dssp HHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHhcCC
Confidence 999999999999974
No 150
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.54 E-value=1.6e-14 Score=162.01 Aligned_cols=58 Identities=12% Similarity=0.169 Sum_probs=53.2
Q ss_pred hhHHHHHHHHHhhhcCceEEeCC---CeeEEEeCCCcEE-EEeCCCcEEeCCEEEEccChHH
Q 035870 214 SHSYVNKVRKQLESWGCQIRTSS---EVCSVLPADKGCT-IVCGDGSREFYNSCVMALHAPD 271 (842)
Q Consensus 214 ~~~l~~~L~~~l~~~G~~i~~~~---~V~~I~~~~~~v~-V~~~~G~~~~ad~VV~A~p~~~ 271 (842)
...+++.|.+.+++.|++|++++ +|++|..++++|. |++.+|+++.||.||+|+..+.
T Consensus 160 ~~~~~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~~~~~v~gV~t~~G~~i~Ad~VV~AtG~~s 221 (438)
T 3dje_A 160 ARNALVAAAREAQRMGVKFVTGTPQGRVVTLIFENNDVKGAVTADGKIWRAERTFLCAGASA 221 (438)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESTTTTCEEEEEEETTEEEEEEETTTEEEECSEEEECCGGGG
T ss_pred HHHHHHHHHHHHHhcCCEEEeCCcCceEEEEEecCCeEEEEEECCCCEEECCEEEECCCCCh
Confidence 56899999999999999999999 9999999888887 9999998899999999998874
No 151
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.53 E-value=5.4e-14 Score=153.10 Aligned_cols=160 Identities=14% Similarity=0.129 Sum_probs=123.5
Q ss_pred HHHHHHHcC-CCCCCeEEEeccCchHHHHHHHHh-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCccCC
Q 035870 618 VSLLIEKAR-VSKGQEVLEIGCGWGTLAIEIVKR-TGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLAKAN 695 (842)
Q Consensus 618 ~~~l~~~l~-~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~~ 695 (842)
...+++.+. +.+..+|||||||+|.++..++++ ++.+++++|+ +.+++.|+++ ++++++.+|+.+..+.
T Consensus 191 ~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-------~~v~~~~~d~~~~~p~- 261 (368)
T 3reo_A 191 MKKILEMYNGFEGLTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PHVIQDAPAF-------SGVEHLGGDMFDGVPK- 261 (368)
T ss_dssp HHHHHTTCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC-------TTEEEEECCTTTCCCC-
T ss_pred HHHHHHhcccccCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HHHHHhhhhc-------CCCEEEecCCCCCCCC-
Confidence 455666665 677889999999999999999988 6789999999 8888877642 3899999998762243
Q ss_pred CccEEEEcchhhhcChhhHHHHHHHHHhccccCcEEEEEeecCCCccccccc----CccchhhhcccCCCCCCCHHHHHH
Q 035870 696 KYDRIISCEMIEAVGHEFMEEFFGCCESLLAEDGLLVLQFISIPDERYNEYR----LSSDFIKEYIFPGGCLPSLSRITS 771 (842)
Q Consensus 696 ~fD~i~s~~~~~~~~~~~~~~~~~~~~~~LkpgG~~~~~~~~~~~~~~~~~~----~~~~~~~~~i~p~~~~~~~~~~~~ 771 (842)
. |+|++..++||++++....++++++++|||||++++.+...++....... ...++......+++...+..++.+
T Consensus 262 ~-D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~rt~~e~~~ 340 (368)
T 3reo_A 262 G-DAIFIKWICHDWSDEHCLKLLKNCYAALPDHGKVIVAEYILPPSPDPSIATKVVIHTDALMLAYNPGGKERTEKEFQA 340 (368)
T ss_dssp C-SEEEEESCGGGBCHHHHHHHHHHHHHHSCTTCEEEEEECCCCSSCCCCHHHHHHHHHHHHHHHHSSBCCCCCHHHHHH
T ss_pred C-CEEEEechhhcCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCchhhhHHHhhhHHHHhhcCCCccCCHHHHHH
Confidence 3 99999999999999888899999999999999999998876654321100 011111111235777889999988
Q ss_pred HHhhcCCcEEEEEEecC
Q 035870 772 AMSVASRLCVEQVENIG 788 (842)
Q Consensus 772 ~~~~~~gf~v~~~~~~~ 788 (842)
.+++ +||+++++....
T Consensus 341 ll~~-AGF~~v~~~~~~ 356 (368)
T 3reo_A 341 LAMA-SGFRGFKVASCA 356 (368)
T ss_dssp HHHH-TTCCEEEEEEEE
T ss_pred HHHH-CCCeeeEEEEeC
Confidence 8887 899998877653
No 152
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.53 E-value=3.2e-14 Score=138.11 Aligned_cols=120 Identities=15% Similarity=0.118 Sum_probs=98.4
Q ss_pred HHHHHHHHcC-CCCCCeEEEeccCchHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCC-c-c
Q 035870 617 KVSLLIEKAR-VSKGQEVLEIGCGWGTLAIEIVKRTGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQL-A-K 693 (842)
Q Consensus 617 ~~~~l~~~l~-~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~-~-~ 693 (842)
..+.+++.+. ..++.+|||+|||+|.++..+++.+..+|+|+|+|+++++.|+++++..++.++++++++|+.+. + .
T Consensus 18 ~~~~~~~~l~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~ 97 (177)
T 2esr_A 18 VRGAIFNMIGPYFNGGRVLDLFAGSGGLAIEAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDCL 97 (177)
T ss_dssp CHHHHHHHHCSCCCSCEEEEETCTTCHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHHB
T ss_pred HHHHHHHHHHhhcCCCeEEEeCCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHHhh
Confidence 3345666665 56888999999999999999998844699999999999999999999998877899999998874 3 3
Q ss_pred CCCccEEEEcchhhhcChhhHHHHHHHHH--hccccCcEEEEEeecCC
Q 035870 694 ANKYDRIISCEMIEAVGHEFMEEFFGCCE--SLLAEDGLLVLQFISIP 739 (842)
Q Consensus 694 ~~~fD~i~s~~~~~~~~~~~~~~~~~~~~--~~LkpgG~~~~~~~~~~ 739 (842)
+++||+|+++..++. ......++.+. ++|||||.+++......
T Consensus 98 ~~~fD~i~~~~~~~~---~~~~~~~~~l~~~~~L~~gG~l~~~~~~~~ 142 (177)
T 2esr_A 98 TGRFDLVFLDPPYAK---ETIVATIEALAAKNLLSEQVMVVCETDKTV 142 (177)
T ss_dssp CSCEEEEEECCSSHH---HHHHHHHHHHHHTTCEEEEEEEEEEEETTC
T ss_pred cCCCCEEEECCCCCc---chHHHHHHHHHhCCCcCCCcEEEEEECCcc
Confidence 467999999877643 23567777776 99999999999776543
No 153
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=99.53 E-value=5.2e-13 Score=140.06 Aligned_cols=56 Identities=38% Similarity=0.586 Sum_probs=54.0
Q ss_pred cEEEECCChHHHHHHHHHHhCCCeEEEEecCCCCCCCceeEeeCCeeeecceEeec
Q 035870 2 RVAVIGAGISGLVSAYVLAKAGVEVVLYEKDDYLGGHAKTVTFDGVDLDLGFMVFN 57 (842)
Q Consensus 2 dV~IIGaGiaGLsaA~~L~~~G~~V~VlEa~~~~GG~~~s~~~~g~~~d~G~~~~~ 57 (842)
||+|||||+|||+||+.|+++|++|+||||++.+||++++.+..+..+|.|++++.
T Consensus 4 dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~GG~~~~~~~~~~~~d~g~~~~~ 59 (336)
T 3kkj_A 4 PIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKRSDAGALDMGAQYFT 59 (336)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEEETTEEEECSCCCBC
T ss_pred CEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccccccCCceeecCccccc
Confidence 89999999999999999999999999999999999999999999999999998884
No 154
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.52 E-value=7.7e-14 Score=151.51 Aligned_cols=160 Identities=15% Similarity=0.095 Sum_probs=124.9
Q ss_pred HHHHHHHHcC-CCCCCeEEEeccCchHHHHHHHHh-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCc-c
Q 035870 617 KVSLLIEKAR-VSKGQEVLEIGCGWGTLAIEIVKR-TGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLA-K 693 (842)
Q Consensus 617 ~~~~l~~~l~-~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~-~ 693 (842)
....+++.+. ..+..+|||||||+|.++..++++ ++.+++++|+ +++++.|+++ ++++++.+|+.+ + +
T Consensus 188 ~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-------~~v~~~~~D~~~-~~p 258 (364)
T 3p9c_A 188 ITKKLLELYHGFEGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-PHVISEAPQF-------PGVTHVGGDMFK-EVP 258 (364)
T ss_dssp HHHHHHHHCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC-------TTEEEEECCTTT-CCC
T ss_pred HHHHHHHhcccccCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-HHHHHhhhhc-------CCeEEEeCCcCC-CCC
Confidence 3456677776 778899999999999999999988 6789999999 8888877642 489999999887 4 4
Q ss_pred CCCccEEEEcchhhhcChhhHHHHHHHHHhccccCcEEEEEeecCCCccccccc----CccchhhhcccCCCCCCCHHHH
Q 035870 694 ANKYDRIISCEMIEAVGHEFMEEFFGCCESLLAEDGLLVLQFISIPDERYNEYR----LSSDFIKEYIFPGGCLPSLSRI 769 (842)
Q Consensus 694 ~~~fD~i~s~~~~~~~~~~~~~~~~~~~~~~LkpgG~~~~~~~~~~~~~~~~~~----~~~~~~~~~i~p~~~~~~~~~~ 769 (842)
. . |+|++..++|+++++....++++++++|||||++++.+...++....... ...++...-..+++...+.+++
T Consensus 259 ~-~-D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~m~~~~~~g~~rt~~e~ 336 (364)
T 3p9c_A 259 S-G-DTILMKWILHDWSDQHCATLLKNCYDALPAHGKVVLVQCILPVNPEANPSSQGVFHVDMIMLAHNPGGRERYEREF 336 (364)
T ss_dssp C-C-SEEEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEECCBCSSCCSSHHHHHHHHHHHHHHHHCSSCCCCBHHHH
T ss_pred C-C-CEEEehHHhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCcchhhhhHHHhHHHHHhcccCCccCCHHHH
Confidence 3 3 99999999999999888999999999999999999998877654321110 0011111112467788899999
Q ss_pred HHHHhhcCCcEEEEEEecC
Q 035870 770 TSAMSVASRLCVEQVENIG 788 (842)
Q Consensus 770 ~~~~~~~~gf~v~~~~~~~ 788 (842)
.+.+++ +||+++++....
T Consensus 337 ~~ll~~-AGF~~v~~~~~~ 354 (364)
T 3p9c_A 337 QALARG-AGFTGVKSTYIY 354 (364)
T ss_dssp HHHHHH-TTCCEEEEEEEE
T ss_pred HHHHHH-CCCceEEEEEcC
Confidence 888887 899998887654
No 155
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=99.52 E-value=1.1e-13 Score=163.48 Aligned_cols=57 Identities=12% Similarity=0.041 Sum_probs=52.9
Q ss_pred hhHHHHHHHHHhhhcCceEEeCCCeeEEEeCCCcEEEEeCCCcEEeCCEEEEccChH
Q 035870 214 SHSYVNKVRKQLESWGCQIRTSSEVCSVLPADKGCTIVCGDGSREFYNSCVMALHAP 270 (842)
Q Consensus 214 ~~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VV~A~p~~ 270 (842)
...++..|.+.+++.|++|+++++|++|..++++|.|++.+|+++.||.||+|+..+
T Consensus 416 p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~~v~V~t~~G~~i~Ad~VVlAtG~~ 472 (676)
T 3ps9_A 416 PAELTRNVLELAQQQGLQIYYQYQLQNFSRKDDCWLLNFAGDQQATHSVVVLANGHQ 472 (676)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECCGGG
T ss_pred HHHHHHHHHHHHHhCCCEEEeCCeeeEEEEeCCeEEEEECCCCEEECCEEEECCCcc
Confidence 468999999999999999999999999999999999999888889999999999877
No 156
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=99.51 E-value=6.5e-13 Score=151.17 Aligned_cols=113 Identities=12% Similarity=0.180 Sum_probs=80.8
Q ss_pred ccccHHHHHHhcCCCHHHHHHHHHHhhhcccCCCchhhccCCHHHH----HHHHhhccccccCCCCceEEecCChhHHHH
Q 035870 144 RSETLGQFVNSRGYSELFQKAYLIPICGSIWSCPSEGVTSFSAFSV----LSFCRNHHLLQLFGRPQWLTVRWRSHSYVN 219 (842)
Q Consensus 144 ~~~s~~~~l~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~gG~~~l~~ 219 (842)
+..++.+|+++.+.++.....+...+ ++..... . ++... ..++.. ...++...+.++.||++.|++
T Consensus 313 d~~S~~d~L~~~~ls~~L~~~L~~~l--al~~~~~--~---pa~~~l~~i~~~l~s---l~~yg~sg~~yp~GG~g~L~q 382 (650)
T 1vg0_A 313 EGTTFSEYLKTQKLTPNLQYFVLHSI--AMTSETT--S---CTVDGLKATKKFLQC---LGRYGNTPFLFPLYGQGELPQ 382 (650)
T ss_dssp TTSBHHHHHTTSSSCHHHHHHHHHHT--TC--CCS--C---BHHHHHHHHHHHHHH---TTSSSSSSEEEETTCTTHHHH
T ss_pred ccCCHHHHHHHhCCCHHHHHHHHHHH--hccCCCC--C---chhHHHHHHHHHHHH---HHhhccCceEEeCCchhHHHH
Confidence 57899999999988887665554332 2222211 1 22222 222221 111333588999999999999
Q ss_pred HHHHHhhhcCceEEeCCCeeEEEeCC--CcE-EEEeCCCcEEeCCEEEEc
Q 035870 220 KVRKQLESWGCQIRTSSEVCSVLPAD--KGC-TIVCGDGSREFYNSCVMA 266 (842)
Q Consensus 220 ~L~~~l~~~G~~i~~~~~V~~I~~~~--~~v-~V~~~~G~~~~ad~VV~A 266 (842)
+|++.+...|++|+++++|++|..++ +++ .|++.+|+++.||+||++
T Consensus 383 aL~r~~~~~Gg~i~l~~~V~~I~~~~~~g~v~gV~~~~Ge~i~A~~VVs~ 432 (650)
T 1vg0_A 383 CFCRMCAVFGGIYCLRHSVQCLVVDKESRKCKAVIDQFGQRIISKHFIIE 432 (650)
T ss_dssp HHHHHHHHTTCEEESSCCEEEEEEETTTCCEEEEEETTSCEEECSEEEEE
T ss_pred HHHHHHHHcCCEEEeCCEeeEEEEeCCCCeEEEEEeCCCCEEEcCEEEEC
Confidence 99999999999999999999999887 555 555678999999999994
No 157
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.51 E-value=1.2e-13 Score=144.00 Aligned_cols=131 Identities=16% Similarity=0.168 Sum_probs=106.1
Q ss_pred CCCCCeEEEeccCchHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCccCCCccEEEEcchh
Q 035870 627 VSKGQEVLEIGCGWGTLAIEIVKRTGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLAKANKYDRIISCEMI 706 (842)
Q Consensus 627 ~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~~~fD~i~s~~~~ 706 (842)
++++.+|||+|||+|.++..+++....+|+|+|+|+.+++.|+++++.+++.++++++++|+.++..+++||+|+++...
T Consensus 123 ~~~~~~VLDlgcG~G~~~~~la~~~~~~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~~~~fD~Vi~~~p~ 202 (278)
T 2frn_A 123 AKPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPGENIADRILMGYVV 202 (278)
T ss_dssp CCTTCEEEETTCTTTTTHHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCCCSCEEEEEECCCS
T ss_pred CCCCCEEEEecccCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcccCCccEEEECCch
Confidence 46789999999999999999999833379999999999999999999999987899999999998766899999996542
Q ss_pred hhcChhhHHHHHHHHHhccccCcEEEEEeecCCCcccccccCccchhhhcccCCCCCCCHHHHHHHHhhcCCcEEEE
Q 035870 707 EAVGHEFMEEFFGCCESLLAEDGLLVLQFISIPDERYNEYRLSSDFIKEYIFPGGCLPSLSRITSAMSVASRLCVEQ 783 (842)
Q Consensus 707 ~~~~~~~~~~~~~~~~~~LkpgG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~gf~v~~ 783 (842)
. ...+++++.++|||||.+++.+++..... .-....++.+.+.+ .|+++..
T Consensus 203 ~------~~~~l~~~~~~LkpgG~l~~~~~~~~~~~-------------------~~~~~~~i~~~~~~-~G~~~~~ 253 (278)
T 2frn_A 203 R------THEFIPKALSIAKDGAIIHYHNTVPEKLM-------------------PREPFETFKRITKE-YGYDVEK 253 (278)
T ss_dssp S------GGGGHHHHHHHEEEEEEEEEEEEEEGGGT-------------------TTTTHHHHHHHHHH-TTCEEEE
T ss_pred h------HHHHHHHHHHHCCCCeEEEEEEeeccccc-------------------cccHHHHHHHHHHH-cCCeeEE
Confidence 1 36788899999999999999876532111 01234566666665 8998877
No 158
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=99.51 E-value=5.4e-14 Score=166.32 Aligned_cols=57 Identities=9% Similarity=0.096 Sum_probs=52.0
Q ss_pred hhHHHHHHHHHhhhcCceEEeCCCeeEEEeCCCcEEEEeCCCc-EEeCCEEEEccChH
Q 035870 214 SHSYVNKVRKQLESWGCQIRTSSEVCSVLPADKGCTIVCGDGS-REFYNSCVMALHAP 270 (842)
Q Consensus 214 ~~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~-~~~ad~VV~A~p~~ 270 (842)
...+++.|.+.+++.|++|+++++|++|..++++|.|++.+|+ ++.||.||+|+..+
T Consensus 411 p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~~v~V~t~~G~~~i~Ad~VVlAtG~~ 468 (689)
T 3pvc_A 411 PSDLTHALMMLAQQNGMTCHYQHELQRLKRIDSQWQLTFGQSQAAKHHATVILATGHR 468 (689)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESCCEEEEEECSSSEEEEEC-CCCCEEESEEEECCGGG
T ss_pred HHHHHHHHHHHHHhCCCEEEeCCeEeEEEEeCCeEEEEeCCCcEEEECCEEEECCCcc
Confidence 4689999999999999999999999999999999999999987 89999999999887
No 159
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.51 E-value=1e-14 Score=150.62 Aligned_cols=153 Identities=18% Similarity=0.155 Sum_probs=101.6
Q ss_pred CCCeEEEeccCchHHHHHHHHh-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCC---c-c---CCCccEE
Q 035870 629 KGQEVLEIGCGWGTLAIEIVKR-TGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQL---A-K---ANKYDRI 700 (842)
Q Consensus 629 ~~~~vLDiGcG~G~~~~~la~~-~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~---~-~---~~~fD~i 700 (842)
++.+|||+|||+|.++..++++ ++.+|+|+|+|+.+++.|+++++.++++++++++++|+.+. + + +++||+|
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~i 144 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIYDFC 144 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSSTTTSTTCCSCCBSEE
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhhhhhhhhhcccCCcccEE
Confidence 6789999999999999999887 57899999999999999999999999987899999997662 2 2 2689999
Q ss_pred EEcchhhhcCh-------------hhHHHHHHHHHhccccCcEEEEEeecCCCcccccccCccchhhhcccCCCCCCCHH
Q 035870 701 ISCEMIEAVGH-------------EFMEEFFGCCESLLAEDGLLVLQFISIPDERYNEYRLSSDFIKEYIFPGGCLPSLS 767 (842)
Q Consensus 701 ~s~~~~~~~~~-------------~~~~~~~~~~~~~LkpgG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~ 767 (842)
+++..+++.+. +....++.+++++|||||.+.+........ . .......++ ....+..+...
T Consensus 145 ~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~~~~~~~~~-~-~~l~~~g~~---~~~~~~~~~~~ 219 (254)
T 2h00_A 145 MCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVKRIIHDS-L-QLKKRLRWY---SCMLGKKCSLA 219 (254)
T ss_dssp EECCCCC-------------------------CTTTTHHHHTHHHHHHHHHHHH-H-HHGGGBSCE---EEEESSTTSHH
T ss_pred EECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEEEHHHHHHH-H-hcccceEEE---EECCCChhHHH
Confidence 99977665431 112356788999999999887642111000 0 000011111 01113344557
Q ss_pred HHHHHHhhcCCcEEEEEEec
Q 035870 768 RITSAMSVASRLCVEQVENI 787 (842)
Q Consensus 768 ~~~~~~~~~~gf~v~~~~~~ 787 (842)
++.+.+.+ +||+.+.+..+
T Consensus 220 ~~~~~l~~-~Gf~~v~~~~~ 238 (254)
T 2h00_A 220 PLKEELRI-QGVPKVTYTEF 238 (254)
T ss_dssp HHHHHHHH-TTCSEEEEEEE
T ss_pred HHHHHHHH-cCCCceEEEEE
Confidence 77777776 89976665543
No 160
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.51 E-value=6.6e-14 Score=140.50 Aligned_cols=110 Identities=15% Similarity=0.228 Sum_probs=94.9
Q ss_pred CCCCCeEEEeccCchHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCc-cCCCccEEEEcch
Q 035870 627 VSKGQEVLEIGCGWGTLAIEIVKRTGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLA-KANKYDRIISCEM 705 (842)
Q Consensus 627 ~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~-~~~~fD~i~s~~~ 705 (842)
++++.+|||||||+|.++..+++....+|+++|+|+.+++.|+++... ..+++++++|+.+++ ++++||+|+++.+
T Consensus 40 ~~~~~~vLdiGcG~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~---~~~i~~~~~d~~~~~~~~~~fD~v~~~~~ 116 (215)
T 2pxx_A 40 LRPEDRILVLGCGNSALSYELFLGGFPNVTSVDYSSVVVAAMQACYAH---VPQLRWETMDVRKLDFPSASFDVVLEKGT 116 (215)
T ss_dssp CCTTCCEEEETCTTCSHHHHHHHTTCCCEEEEESCHHHHHHHHHHTTT---CTTCEEEECCTTSCCSCSSCEEEEEEESH
T ss_pred cCCCCeEEEECCCCcHHHHHHHHcCCCcEEEEeCCHHHHHHHHHhccc---CCCcEEEEcchhcCCCCCCcccEEEECcc
Confidence 368889999999999999999988323899999999999999998754 237999999999887 5689999999999
Q ss_pred hhhcC-------------hhhHHHHHHHHHhccccCcEEEEEeecCC
Q 035870 706 IEAVG-------------HEFMEEFFGCCESLLAEDGLLVLQFISIP 739 (842)
Q Consensus 706 ~~~~~-------------~~~~~~~~~~~~~~LkpgG~~~~~~~~~~ 739 (842)
++++. .+....+++++.++|||||++++.++..+
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~ 163 (215)
T 2pxx_A 117 LDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSAAP 163 (215)
T ss_dssp HHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCH
T ss_pred hhhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeCCCc
Confidence 98876 34578999999999999999999876543
No 161
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.51 E-value=2.6e-15 Score=153.84 Aligned_cols=104 Identities=18% Similarity=0.207 Sum_probs=93.5
Q ss_pred CCCCeEEEeccCchHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCccCCCccEEEEcchhh
Q 035870 628 SKGQEVLEIGCGWGTLAIEIVKRTGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLAKANKYDRIISCEMIE 707 (842)
Q Consensus 628 ~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~~~fD~i~s~~~~~ 707 (842)
.++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|+++++..++.++++++++|+.+++++++||+|+++.+++
T Consensus 77 ~~~~~vLD~gcG~G~~~~~la~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~~~ 155 (241)
T 3gdh_A 77 FKCDVVVDAFCGVGGNTIQFALT-GMRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLASFLKADVVFLSPPWG 155 (241)
T ss_dssp SCCSEEEETTCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHGGGCCCSEEEECCCCS
T ss_pred cCCCEEEECccccCHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhcccCCCCEEEECCCcC
Confidence 37889999999999999999997 79999999999999999999999998668999999998887668999999999999
Q ss_pred hcChhhHHHHHHHHHhccccCcEEEEE
Q 035870 708 AVGHEFMEEFFGCCESLLAEDGLLVLQ 734 (842)
Q Consensus 708 ~~~~~~~~~~~~~~~~~LkpgG~~~~~ 734 (842)
+.+. ....+.+++++|||||.+++.
T Consensus 156 ~~~~--~~~~~~~~~~~L~pgG~~i~~ 180 (241)
T 3gdh_A 156 GPDY--ATAETFDIRTMMSPDGFEIFR 180 (241)
T ss_dssp SGGG--GGSSSBCTTTSCSSCHHHHHH
T ss_pred Ccch--hhhHHHHHHhhcCCcceeHHH
Confidence 8865 444777899999999997764
No 162
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.50 E-value=1e-13 Score=150.33 Aligned_cols=131 Identities=13% Similarity=0.237 Sum_probs=104.9
Q ss_pred cccccCCCcccHHHHHHHHHHHHHHHcCCCCCCeEEEeccCchHHHHHHHHh-cCCEEEEEcCCHHHHHHHHHHHHHcCC
Q 035870 599 SCAVFKSEDEDLKAAQMRKVSLLIEKARVSKGQEVLEIGCGWGTLAIEIVKR-TGCKYTGITLSEEQLKYAEMKVKEAGL 677 (842)
Q Consensus 599 s~~~~~~~~~~l~~aq~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gid~s~~~~~~a~~~~~~~~l 677 (842)
..+.|.....+... +.+++.+...++.+|||+|||+|.++..+++. ++.+|+++|+|+.+++.|+++++.+++
T Consensus 198 ~pg~Fs~~~~d~~~------~~ll~~l~~~~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ngl 271 (375)
T 4dcm_A 198 HANVFSRTGLDIGA------RFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMP 271 (375)
T ss_dssp CTTCTTCSSCCHHH------HHHHHTCCCSCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCG
T ss_pred CCCcccCCcccHHH------HHHHHhCcccCCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHcCC
Confidence 45566554433332 35677777778899999999999999999998 478999999999999999999999887
Q ss_pred CC--CeEEEEccccCCccCCCccEEEEcchhhh---cChhhHHHHHHHHHhccccCcEEEEEe
Q 035870 678 QD--LIRLYLCDYRQLAKANKYDRIISCEMIEA---VGHEFMEEFFGCCESLLAEDGLLVLQF 735 (842)
Q Consensus 678 ~~--~v~~~~~d~~~~~~~~~fD~i~s~~~~~~---~~~~~~~~~~~~~~~~LkpgG~~~~~~ 735 (842)
.+ +++++.+|+.+..++++||+|+++..+++ +++.....+++++.++|||||++++..
T Consensus 272 ~~~~~v~~~~~D~~~~~~~~~fD~Ii~nppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~ 334 (375)
T 4dcm_A 272 EALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVA 334 (375)
T ss_dssp GGGGGEEEEECSTTTTCCTTCEEEEEECCCC-------CCHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CcCceEEEEechhhccCCCCCeeEEEECCCcccCcccCHHHHHHHHHHHHHhCCCCcEEEEEE
Confidence 54 58889999887556679999999999875 334345688999999999999999954
No 163
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.50 E-value=8.2e-14 Score=136.50 Aligned_cols=117 Identities=16% Similarity=0.107 Sum_probs=96.0
Q ss_pred HHHHHHcC-CCCCCeEEEeccCchHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCc-----
Q 035870 619 SLLIEKAR-VSKGQEVLEIGCGWGTLAIEIVKRTGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLA----- 692 (842)
Q Consensus 619 ~~l~~~l~-~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~----- 692 (842)
+.+++.+. ..++.+|||+|||+|.++..+++....+|+|+|+|+++++.|++++...++.++++++++|+.+..
T Consensus 33 ~~~~~~l~~~~~~~~vLD~GcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 112 (187)
T 2fhp_A 33 ESIFNMIGPYFDGGMALDLYSGSGGLAIEAVSRGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQFYE 112 (187)
T ss_dssp HHHHHHHCSCCSSCEEEETTCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHhhcCCCCEEEeCCccCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHHHHHh
Confidence 44555553 457889999999999999999887557999999999999999999999888778999999987743
Q ss_pred cCCCccEEEEcchhhhcChhhHHHHHHHH--HhccccCcEEEEEeecC
Q 035870 693 KANKYDRIISCEMIEAVGHEFMEEFFGCC--ESLLAEDGLLVLQFISI 738 (842)
Q Consensus 693 ~~~~fD~i~s~~~~~~~~~~~~~~~~~~~--~~~LkpgG~~~~~~~~~ 738 (842)
.+++||+|+++.+++.. .....++.+ .++|||||.+++.....
T Consensus 113 ~~~~fD~i~~~~~~~~~---~~~~~~~~l~~~~~L~~gG~l~~~~~~~ 157 (187)
T 2fhp_A 113 EKLQFDLVLLDPPYAKQ---EIVSQLEKMLERQLLTNEAVIVCETDKT 157 (187)
T ss_dssp TTCCEEEEEECCCGGGC---CHHHHHHHHHHTTCEEEEEEEEEEEETT
T ss_pred cCCCCCEEEECCCCCch---hHHHHHHHHHHhcccCCCCEEEEEeCCc
Confidence 15799999999885532 256777777 89999999999976554
No 164
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.50 E-value=5e-14 Score=139.57 Aligned_cols=107 Identities=13% Similarity=0.125 Sum_probs=90.7
Q ss_pred CCCeEEEeccCchHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHHcCCC-CCeEEEEccccCCc---cCCC-ccEEEEc
Q 035870 629 KGQEVLEIGCGWGTLAIEIVKRTGCKYTGITLSEEQLKYAEMKVKEAGLQ-DLIRLYLCDYRQLA---KANK-YDRIISC 703 (842)
Q Consensus 629 ~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~~l~-~~v~~~~~d~~~~~---~~~~-fD~i~s~ 703 (842)
++.+|||+|||+|.++..+++....+|+|+|+|+++++.|+++++.+++. ++++++++|+.+.. .+++ ||+|+++
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~ 132 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSRQAKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQNQPHFDVVFLD 132 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSCCSSCCEEEEEEC
T ss_pred CCCeEEEcCCccCHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhhccCCCCCEEEEC
Confidence 67899999999999999988774469999999999999999999999884 58999999987754 2468 9999999
Q ss_pred chhhhcChhhHHHHHHHH--HhccccCcEEEEEeecC
Q 035870 704 EMIEAVGHEFMEEFFGCC--ESLLAEDGLLVLQFISI 738 (842)
Q Consensus 704 ~~~~~~~~~~~~~~~~~~--~~~LkpgG~~~~~~~~~ 738 (842)
..++ .+ ....+++.+ .++|||||.+++.....
T Consensus 133 ~~~~-~~--~~~~~l~~~~~~~~LkpgG~l~i~~~~~ 166 (201)
T 2ift_A 133 PPFH-FN--LAEQAISLLCENNWLKPNALIYVETEKD 166 (201)
T ss_dssp CCSS-SC--HHHHHHHHHHHTTCEEEEEEEEEEEESS
T ss_pred CCCC-Cc--cHHHHHHHHHhcCccCCCcEEEEEECCC
Confidence 8854 33 378889998 67899999999976554
No 165
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.50 E-value=8.5e-14 Score=139.79 Aligned_cols=140 Identities=21% Similarity=0.183 Sum_probs=108.4
Q ss_pred HHHHHHHHHcCCCCCCeEEEeccCchHHHHHHHHhcC--CEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCc-
Q 035870 616 RKVSLLIEKARVSKGQEVLEIGCGWGTLAIEIVKRTG--CKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLA- 692 (842)
Q Consensus 616 ~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~--~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~- 692 (842)
.....+++.+.+.++.+|||||||+|.++..+++..+ .+|+++|+|+++++.|++++...++. ++++.++|.....
T Consensus 64 ~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~ 142 (215)
T 2yxe_A 64 HMVGMMCELLDLKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYD-NVIVIVGDGTLGYE 142 (215)
T ss_dssp HHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCT-TEEEEESCGGGCCG
T ss_pred HHHHHHHHhhCCCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCC-CeEEEECCcccCCC
Confidence 3445677788888999999999999999999998843 79999999999999999999988876 6999999986543
Q ss_pred cCCCccEEEEcchhhhcChhhHHHHHHHHHhccccCcEEEEEeecCCCcccccccC-ccchhhhcccCCCCCCC
Q 035870 693 KANKYDRIISCEMIEAVGHEFMEEFFGCCESLLAEDGLLVLQFISIPDERYNEYRL-SSDFIKEYIFPGGCLPS 765 (842)
Q Consensus 693 ~~~~fD~i~s~~~~~~~~~~~~~~~~~~~~~~LkpgG~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~p~~~~~~ 765 (842)
..++||+|++..+++|+.+ ++.++|||||++++...... .....+.+ ...|..+++++....|.
T Consensus 143 ~~~~fD~v~~~~~~~~~~~--------~~~~~L~pgG~lv~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~p~ 207 (215)
T 2yxe_A 143 PLAPYDRIYTTAAGPKIPE--------PLIRQLKDGGKLLMPVGRYL-QRLVLAEKRGDEIIIKDCGPVAFVPL 207 (215)
T ss_dssp GGCCEEEEEESSBBSSCCH--------HHHHTEEEEEEEEEEESSSS-EEEEEEEEETTEEEEEEEEEECCCBC
T ss_pred CCCCeeEEEECCchHHHHH--------HHHHHcCCCcEEEEEECCCC-cEEEEEEEeCCEEEEEEeccEEEEec
Confidence 3578999999999999863 78999999999999765443 22222211 23455555555444443
No 166
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.50 E-value=1.3e-13 Score=135.59 Aligned_cols=113 Identities=21% Similarity=0.312 Sum_probs=98.1
Q ss_pred HHHHHHHcCCCCCCeEEEeccCchHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCC-ccCCC
Q 035870 618 VSLLIEKARVSKGQEVLEIGCGWGTLAIEIVKRTGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQL-AKANK 696 (842)
Q Consensus 618 ~~~l~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~-~~~~~ 696 (842)
...+++.+.+.++.+|||+|||+|.++..+++. +.+|+++|+|+.+++.+++++...++.+++++.++|+.+. +..++
T Consensus 22 ~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~-~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 100 (192)
T 1l3i_A 22 RCLIMCLAEPGKNDVAVDVGCGTGGVTLELAGR-VRRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEALCKIPD 100 (192)
T ss_dssp HHHHHHHHCCCTTCEEEEESCTTSHHHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHHHTTSCC
T ss_pred HHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHh-cCEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHHhcccCCC
Confidence 345667778889999999999999999999988 4899999999999999999999998866899999998772 22268
Q ss_pred ccEEEEcchhhhcChhhHHHHHHHHHhccccCcEEEEEee
Q 035870 697 YDRIISCEMIEAVGHEFMEEFFGCCESLLAEDGLLVLQFI 736 (842)
Q Consensus 697 fD~i~s~~~~~~~~~~~~~~~~~~~~~~LkpgG~~~~~~~ 736 (842)
||+|++..++++ +..+++++.++|+|||.+++...
T Consensus 101 ~D~v~~~~~~~~-----~~~~l~~~~~~l~~gG~l~~~~~ 135 (192)
T 1l3i_A 101 IDIAVVGGSGGE-----LQEILRIIKDKLKPGGRIIVTAI 135 (192)
T ss_dssp EEEEEESCCTTC-----HHHHHHHHHHTEEEEEEEEEEEC
T ss_pred CCEEEECCchHH-----HHHHHHHHHHhcCCCcEEEEEec
Confidence 999999887754 58899999999999999998654
No 167
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.49 E-value=3.3e-14 Score=143.42 Aligned_cols=110 Identities=17% Similarity=0.236 Sum_probs=92.4
Q ss_pred CCCCCeEEEeccCchHHHHHHHHh--cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCC-c-cC-----CCc
Q 035870 627 VSKGQEVLEIGCGWGTLAIEIVKR--TGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQL-A-KA-----NKY 697 (842)
Q Consensus 627 ~~~~~~vLDiGcG~G~~~~~la~~--~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~-~-~~-----~~f 697 (842)
..++.+|||||||+|..+..+++. .+++|+++|+|+++++.|+++++..++.++++++++|+.+. + .. ++|
T Consensus 56 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~~~~~~~~~~f 135 (221)
T 3u81_A 56 EYSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKYDVDTL 135 (221)
T ss_dssp HHCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGTTTTSCCCCC
T ss_pred hcCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHHHHHHhcCCCce
Confidence 346789999999999999999986 37899999999999999999999999987899999998653 2 11 689
Q ss_pred cEEEEcchhhhcChhhHHHHHHHHHhccccCcEEEEEeecCC
Q 035870 698 DRIISCEMIEAVGHEFMEEFFGCCESLLAEDGLLVLQFISIP 739 (842)
Q Consensus 698 D~i~s~~~~~~~~~~~~~~~~~~~~~~LkpgG~~~~~~~~~~ 739 (842)
|+|++....++..+ ...+++.+ ++|||||++++.++..+
T Consensus 136 D~V~~d~~~~~~~~--~~~~~~~~-~~LkpgG~lv~~~~~~~ 174 (221)
T 3u81_A 136 DMVFLDHWKDRYLP--DTLLLEKC-GLLRKGTVLLADNVIVP 174 (221)
T ss_dssp SEEEECSCGGGHHH--HHHHHHHT-TCCCTTCEEEESCCCCC
T ss_pred EEEEEcCCcccchH--HHHHHHhc-cccCCCeEEEEeCCCCc
Confidence 99999887766533 45677777 99999999999766543
No 168
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.49 E-value=1.1e-13 Score=138.81 Aligned_cols=120 Identities=17% Similarity=0.179 Sum_probs=99.9
Q ss_pred HHHHHHHHHHHcCCCCCCeEEEeccCchHHHHHHHHh--cCCEEEEEcCCHHHHHHHHHHHHHcCCC-CCeEEEEccccC
Q 035870 614 QMRKVSLLIEKARVSKGQEVLEIGCGWGTLAIEIVKR--TGCKYTGITLSEEQLKYAEMKVKEAGLQ-DLIRLYLCDYRQ 690 (842)
Q Consensus 614 q~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~la~~--~~~~v~gid~s~~~~~~a~~~~~~~~l~-~~v~~~~~d~~~ 690 (842)
+.+.+..++...+.+++.+|||||||+|..+..+++. ++++|+++|+|+++++.|+++++..|+. ++++++++|+.+
T Consensus 41 ~~~~l~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~ 120 (221)
T 3dr5_A 41 TGQLLTTLAATTNGNGSTGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLD 120 (221)
T ss_dssp HHHHHHHHHHHSCCTTCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHH
T ss_pred HHHHHHHHHHhhCCCCCCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHH
Confidence 3455566666666666779999999999999999986 3789999999999999999999999997 799999999876
Q ss_pred Cc---cCCCccEEEEcchhhhcChhhHHHHHHHHHhccccCcEEEEEeecC
Q 035870 691 LA---KANKYDRIISCEMIEAVGHEFMEEFFGCCESLLAEDGLLVLQFISI 738 (842)
Q Consensus 691 ~~---~~~~fD~i~s~~~~~~~~~~~~~~~~~~~~~~LkpgG~~~~~~~~~ 738 (842)
.. .+++||+|++.... ..+..+++++.++|||||++++.++..
T Consensus 121 ~l~~~~~~~fD~V~~d~~~-----~~~~~~l~~~~~~LkpGG~lv~dn~~~ 166 (221)
T 3dr5_A 121 VMSRLANDSYQLVFGQVSP-----MDLKALVDAAWPLLRRGGALVLADALL 166 (221)
T ss_dssp HGGGSCTTCEEEEEECCCT-----TTHHHHHHHHHHHEEEEEEEEETTTTG
T ss_pred HHHHhcCCCcCeEEEcCcH-----HHHHHHHHHHHHHcCCCcEEEEeCCCC
Confidence 53 25899999986532 336789999999999999999965543
No 169
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.49 E-value=3.6e-13 Score=131.30 Aligned_cols=133 Identities=14% Similarity=0.223 Sum_probs=108.7
Q ss_pred HHHHHHHHcCCCCCCeEEEeccCchHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCccCCC
Q 035870 617 KVSLLIEKARVSKGQEVLEIGCGWGTLAIEIVKRTGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLAKANK 696 (842)
Q Consensus 617 ~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~~~ 696 (842)
..+.+++.+...++.+|||+|||+|.++..+++ .+.+|+++|+|+.+++.|+++++..+++ +++++++|+.+..++++
T Consensus 23 ~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~-~~~~~~~d~~~~~~~~~ 100 (183)
T 2yxd_A 23 IRAVSIGKLNLNKDDVVVDVGCGSGGMTVEIAK-RCKFVYAIDYLDGAIEVTKQNLAKFNIK-NCQIIKGRAEDVLDKLE 100 (183)
T ss_dssp HHHHHHHHHCCCTTCEEEEESCCCSHHHHHHHT-TSSEEEEEECSHHHHHHHHHHHHHTTCC-SEEEEESCHHHHGGGCC
T ss_pred HHHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHh-cCCeEEEEeCCHHHHHHHHHHHHHcCCC-cEEEEECCccccccCCC
Confidence 345667777888899999999999999999998 5889999999999999999999999884 79999999887335579
Q ss_pred ccEEEEcchhhhcChhhHHHHHHHHHhccccCcEEEEEeecCCCcccccccCccchhhhcccCCCCCCCHHHHHHHHhhc
Q 035870 697 YDRIISCEMIEAVGHEFMEEFFGCCESLLAEDGLLVLQFISIPDERYNEYRLSSDFIKEYIFPGGCLPSLSRITSAMSVA 776 (842)
Q Consensus 697 fD~i~s~~~~~~~~~~~~~~~~~~~~~~LkpgG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~ 776 (842)
||+|+++.+ .....+++++.++ |||.+++...... ...++.+.+.+
T Consensus 101 ~D~i~~~~~------~~~~~~l~~~~~~--~gG~l~~~~~~~~-------------------------~~~~~~~~l~~- 146 (183)
T 2yxd_A 101 FNKAFIGGT------KNIEKIIEILDKK--KINHIVANTIVLE-------------------------NAAKIINEFES- 146 (183)
T ss_dssp CSEEEECSC------SCHHHHHHHHHHT--TCCEEEEEESCHH-------------------------HHHHHHHHHHH-
T ss_pred CcEEEECCc------ccHHHHHHHHhhC--CCCEEEEEecccc-------------------------cHHHHHHHHHH-
Confidence 999999887 2378999999999 9999999653211 13455566666
Q ss_pred CCcEEEEEE
Q 035870 777 SRLCVEQVE 785 (842)
Q Consensus 777 ~gf~v~~~~ 785 (842)
.||+++.++
T Consensus 147 ~g~~~~~~~ 155 (183)
T 2yxd_A 147 RGYNVDAVN 155 (183)
T ss_dssp TTCEEEEEE
T ss_pred cCCeEEEEE
Confidence 788877654
No 170
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.49 E-value=8.5e-14 Score=152.10 Aligned_cols=158 Identities=17% Similarity=0.152 Sum_probs=121.2
Q ss_pred HHHHHHHHcC-CCCCCeEEEeccCchHHHHHHHHh-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCccC
Q 035870 617 KVSLLIEKAR-VSKGQEVLEIGCGWGTLAIEIVKR-TGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLAKA 694 (842)
Q Consensus 617 ~~~~l~~~l~-~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~ 694 (842)
....+++.+. ++++.+|||||||+|.++..++++ ++.+++++|+ +.+++.|++. .+++++.+|+.+ +..
T Consensus 196 ~~~~l~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~-------~~v~~~~~d~~~-~~~ 266 (372)
T 1fp1_D 196 EMKRMLEIYTGFEGISTLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVIENAPPL-------SGIEHVGGDMFA-SVP 266 (372)
T ss_dssp HHHHHHHHCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC-------TTEEEEECCTTT-CCC
T ss_pred HHHHHHHHhhccCCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHHHhhhhc-------CCCEEEeCCccc-CCC
Confidence 3456777775 677899999999999999999988 5789999999 9999887642 369999999977 422
Q ss_pred CCccEEEEcchhhhcChhhHHHHHHHHHhccccCcEEEEEeecCCCcccccc----cCccchhhhcccCCCCCCCHHHHH
Q 035870 695 NKYDRIISCEMIEAVGHEFMEEFFGCCESLLAEDGLLVLQFISIPDERYNEY----RLSSDFIKEYIFPGGCLPSLSRIT 770 (842)
Q Consensus 695 ~~fD~i~s~~~~~~~~~~~~~~~~~~~~~~LkpgG~~~~~~~~~~~~~~~~~----~~~~~~~~~~i~p~~~~~~~~~~~ 770 (842)
. ||+|++..++||++++....++++++++|||||++++.+...+....... ....++.. ...+++...+..++.
T Consensus 267 ~-~D~v~~~~~lh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~~t~~e~~ 344 (372)
T 1fp1_D 267 Q-GDAMILKAVCHNWSDEKCIEFLSNCHKALSPNGKVIIVEFILPEEPNTSEESKLVSTLDNLM-FITVGGRERTEKQYE 344 (372)
T ss_dssp C-EEEEEEESSGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEECSSCCSSHHHHHHHHHHHHH-HHHHSCCCEEHHHHH
T ss_pred C-CCEEEEecccccCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCccchHHHHHHHhhHHH-HhccCCccCCHHHHH
Confidence 3 99999999999999866679999999999999999998877655422110 00011110 113456677899998
Q ss_pred HHHhhcCCcEEEEEEe
Q 035870 771 SAMSVASRLCVEQVEN 786 (842)
Q Consensus 771 ~~~~~~~gf~v~~~~~ 786 (842)
+.+.+ +||+++++..
T Consensus 345 ~ll~~-aGf~~~~~~~ 359 (372)
T 1fp1_D 345 KLSKL-SGFSKFQVAC 359 (372)
T ss_dssp HHHHH-TTCSEEEEEE
T ss_pred HHHHH-CCCceEEEEE
Confidence 88887 8999888766
No 171
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.49 E-value=2.7e-13 Score=134.39 Aligned_cols=106 Identities=23% Similarity=0.208 Sum_probs=92.4
Q ss_pred CCCCCeEEEeccCchHHHHHHHHh-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCc-cCCCccEEEEcc
Q 035870 627 VSKGQEVLEIGCGWGTLAIEIVKR-TGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLA-KANKYDRIISCE 704 (842)
Q Consensus 627 ~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~-~~~~fD~i~s~~ 704 (842)
++++.+|||||||+|.+++.+++. +..+|+++|+|+.+++.|+++++.+|+.++|+++++|..+.. ++.+||+|++.+
T Consensus 19 v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~~~~~~D~IviaG 98 (230)
T 3lec_A 19 VPKGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFEEADNIDTITICG 98 (230)
T ss_dssp SCTTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEE
T ss_pred CCCCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhccccccccCEEEEeC
Confidence 468899999999999999999998 345899999999999999999999999989999999987766 334799999877
Q ss_pred hhhhcChhhHHHHHHHHHhccccCcEEEEEee
Q 035870 705 MIEAVGHEFMEEFFGCCESLLAEDGLLVLQFI 736 (842)
Q Consensus 705 ~~~~~~~~~~~~~~~~~~~~LkpgG~~~~~~~ 736 (842)
|.-.+ ...++.+..+.|+++|+++++..
T Consensus 99 mGg~l----I~~IL~~~~~~l~~~~~lIlqp~ 126 (230)
T 3lec_A 99 MGGRL----IADILNNDIDKLQHVKTLVLQPN 126 (230)
T ss_dssp ECHHH----HHHHHHHTGGGGTTCCEEEEEES
T ss_pred CchHH----HHHHHHHHHHHhCcCCEEEEECC
Confidence 65543 77889999999999999999764
No 172
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.49 E-value=1e-13 Score=141.76 Aligned_cols=102 Identities=16% Similarity=0.174 Sum_probs=89.7
Q ss_pred CCCCCeEEEeccCchHHHHHHHHh-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCcc----CCCccEEE
Q 035870 627 VSKGQEVLEIGCGWGTLAIEIVKR-TGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLAK----ANKYDRII 701 (842)
Q Consensus 627 ~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~----~~~fD~i~ 701 (842)
..++.+|||||||+|..++.++.. ++.+|+++|+|+.+++.|+++++..++. +|+++++|+.+++. .++||+|+
T Consensus 78 ~~~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l~-~v~~~~~d~~~~~~~~~~~~~fD~I~ 156 (249)
T 3g89_A 78 WQGPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLK-GARALWGRAEVLAREAGHREAYARAV 156 (249)
T ss_dssp CCSSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCS-SEEEEECCHHHHTTSTTTTTCEEEEE
T ss_pred cCCCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCC-ceEEEECcHHHhhcccccCCCceEEE
Confidence 357889999999999999999987 6789999999999999999999999987 59999999988762 37999999
Q ss_pred EcchhhhcChhhHHHHHHHHHhccccCcEEEEEe
Q 035870 702 SCEMIEAVGHEFMEEFFGCCESLLAEDGLLVLQF 735 (842)
Q Consensus 702 s~~~~~~~~~~~~~~~~~~~~~~LkpgG~~~~~~ 735 (842)
|..+ .+ +..+++.+.++|||||++++..
T Consensus 157 s~a~----~~--~~~ll~~~~~~LkpgG~l~~~~ 184 (249)
T 3g89_A 157 ARAV----AP--LCVLSELLLPFLEVGGAAVAMK 184 (249)
T ss_dssp EESS----CC--HHHHHHHHGGGEEEEEEEEEEE
T ss_pred ECCc----CC--HHHHHHHHHHHcCCCeEEEEEe
Confidence 9753 33 6899999999999999998743
No 173
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.49 E-value=3.1e-13 Score=133.84 Aligned_cols=106 Identities=23% Similarity=0.234 Sum_probs=91.3
Q ss_pred CCCCCeEEEeccCchHHHHHHHHh-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccc-CCccCCCccEEEEcc
Q 035870 627 VSKGQEVLEIGCGWGTLAIEIVKR-TGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYR-QLAKANKYDRIISCE 704 (842)
Q Consensus 627 ~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~-~~~~~~~fD~i~s~~ 704 (842)
++++.+|||||||+|.+++.+++. +..+|+++|+|+.+++.|+++++.+|+.++|+++++|.. .+++.++||+|+..+
T Consensus 13 v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~l~~~~~~D~IviaG 92 (225)
T 3kr9_A 13 VSQGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAAFEETDQVSVITIAG 92 (225)
T ss_dssp SCTTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEE
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhhcccCcCCCEEEEcC
Confidence 468899999999999999999998 356899999999999999999999999989999999975 454333799999877
Q ss_pred hhhhcChhhHHHHHHHHHhccccCcEEEEEee
Q 035870 705 MIEAVGHEFMEEFFGCCESLLAEDGLLVLQFI 736 (842)
Q Consensus 705 ~~~~~~~~~~~~~~~~~~~~LkpgG~~~~~~~ 736 (842)
|.. +....++.+..+.|+|+|+++++..
T Consensus 93 ~Gg----~~i~~Il~~~~~~L~~~~~lVlq~~ 120 (225)
T 3kr9_A 93 MGG----RLIARILEEGLGKLANVERLILQPN 120 (225)
T ss_dssp ECH----HHHHHHHHHTGGGCTTCCEEEEEES
T ss_pred CCh----HHHHHHHHHHHHHhCCCCEEEEECC
Confidence 633 3368899999999999999999654
No 174
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.49 E-value=2.9e-13 Score=141.45 Aligned_cols=116 Identities=14% Similarity=0.279 Sum_probs=96.3
Q ss_pred HHHHHHHHcCCCCCCeEEEeccCchHHHHHHHHh-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCccCC
Q 035870 617 KVSLLIEKARVSKGQEVLEIGCGWGTLAIEIVKR-TGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLAKAN 695 (842)
Q Consensus 617 ~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~~ 695 (842)
.++.+++.+. .++.+|||+|||+|.++..+++. ++.+|+++|+|+.+++.|+++++..+++ +++++++|+.+..+++
T Consensus 98 l~~~~l~~~~-~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~~~~-~v~~~~~d~~~~~~~~ 175 (276)
T 2b3t_A 98 LVEQALARLP-EQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAIK-NIHILQSDWFSALAGQ 175 (276)
T ss_dssp HHHHHHHHSC-SSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHTCC-SEEEECCSTTGGGTTC
T ss_pred HHHHHHHhcc-cCCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCC-ceEEEEcchhhhcccC
Confidence 3455666665 67789999999999999999976 5789999999999999999999998886 7999999987754457
Q ss_pred CccEEEEcc-------------hhhhcCh----------hhHHHHHHHHHhccccCcEEEEE
Q 035870 696 KYDRIISCE-------------MIEAVGH----------EFMEEFFGCCESLLAEDGLLVLQ 734 (842)
Q Consensus 696 ~fD~i~s~~-------------~~~~~~~----------~~~~~~~~~~~~~LkpgG~~~~~ 734 (842)
+||+|+++. +++|.+. +.+..+++++.++|||||++++.
T Consensus 176 ~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~ 237 (276)
T 2b3t_A 176 QFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLE 237 (276)
T ss_dssp CEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred CccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 899999984 3333321 34688999999999999999985
No 175
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.49 E-value=1.1e-13 Score=138.39 Aligned_cols=107 Identities=20% Similarity=0.249 Sum_probs=90.0
Q ss_pred CCCCeEEEeccCchHHHHHHHHh-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCc---cCCCccEEEEc
Q 035870 628 SKGQEVLEIGCGWGTLAIEIVKR-TGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLA---KANKYDRIISC 703 (842)
Q Consensus 628 ~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~---~~~~fD~i~s~ 703 (842)
.++.+|||||||+|.++..+|+. ++.+|+|+|+|+.+++.|++++...+++ +++++++|+.+++ ++++||.|+++
T Consensus 37 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~~~-nv~~~~~d~~~l~~~~~~~~~d~v~~~ 115 (213)
T 2fca_A 37 NDNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQ-NVKLLNIDADTLTDVFEPGEVKRVYLN 115 (213)
T ss_dssp SCCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCS-SEEEECCCGGGHHHHCCTTSCCEEEEE
T ss_pred CCCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcCCC-CEEEEeCCHHHHHhhcCcCCcCEEEEE
Confidence 36779999999999999999988 6789999999999999999999998885 7999999998864 46789999987
Q ss_pred chhhhcChh------hHHHHHHHHHhccccCcEEEEEe
Q 035870 704 EMIEAVGHE------FMEEFFGCCESLLAEDGLLVLQF 735 (842)
Q Consensus 704 ~~~~~~~~~------~~~~~~~~~~~~LkpgG~~~~~~ 735 (842)
....+.... ....+++++.++|||||.+++.+
T Consensus 116 ~~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~t 153 (213)
T 2fca_A 116 FSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKT 153 (213)
T ss_dssp SCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEE
T ss_pred CCCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEe
Confidence 543322211 13689999999999999999864
No 176
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.49 E-value=8.2e-14 Score=141.50 Aligned_cols=110 Identities=19% Similarity=0.284 Sum_probs=94.3
Q ss_pred HcCCCCCCeEEEeccCchHHHHHHHHh-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCcc---CCCccE
Q 035870 624 KARVSKGQEVLEIGCGWGTLAIEIVKR-TGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLAK---ANKYDR 699 (842)
Q Consensus 624 ~l~~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~---~~~fD~ 699 (842)
.+...++.+|||||||+|..+..+++. ++.+|+++|+|+++++.|+++++..++.++++++++|+.+..+ +++||+
T Consensus 66 ~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~ 145 (232)
T 3ntv_A 66 LIRMNNVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENVNDKVYDM 145 (232)
T ss_dssp HHHHHTCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHHHTTSCEEE
T ss_pred HHhhcCCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhhccCCccE
Confidence 333457889999999999999999985 4789999999999999999999999998899999999987643 589999
Q ss_pred EEEcchhhhcChhhHHHHHHHHHhccccCcEEEEEeecC
Q 035870 700 IISCEMIEAVGHEFMEEFFGCCESLLAEDGLLVLQFISI 738 (842)
Q Consensus 700 i~s~~~~~~~~~~~~~~~~~~~~~~LkpgG~~~~~~~~~ 738 (842)
|++.... ..+..+++.+.++|||||++++..+..
T Consensus 146 V~~~~~~-----~~~~~~l~~~~~~LkpgG~lv~d~~~~ 179 (232)
T 3ntv_A 146 IFIDAAK-----AQSKKFFEIYTPLLKHQGLVITDNVLY 179 (232)
T ss_dssp EEEETTS-----SSHHHHHHHHGGGEEEEEEEEEECTTG
T ss_pred EEEcCcH-----HHHHHHHHHHHHhcCCCeEEEEeeCCc
Confidence 9986432 237889999999999999999966544
No 177
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.48 E-value=1.4e-13 Score=147.85 Aligned_cols=114 Identities=25% Similarity=0.277 Sum_probs=96.1
Q ss_pred HHHHHHcCCCCCCeEEEeccCchHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCc-cCCCc
Q 035870 619 SLLIEKARVSKGQEVLEIGCGWGTLAIEIVKRTGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLA-KANKY 697 (842)
Q Consensus 619 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~-~~~~f 697 (842)
+.+.+.+.+.++.+|||||||+|.++..+++....+|+|+|+|+ +++.|+++++.+++.++++++++|+.+++ ++++|
T Consensus 54 ~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~v~gvD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~ 132 (340)
T 2fyt_A 54 DFIYQNPHIFKDKVVLDVGCGTGILSMFAAKAGAKKVLGVDQSE-ILYQAMDIIRLNKLEDTITLIKGKIEEVHLPVEKV 132 (340)
T ss_dssp HHHHHCGGGTTTCEEEEETCTTSHHHHHHHHTTCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSCCSCSCE
T ss_pred HHHHhhhhhcCCCEEEEeeccCcHHHHHHHHcCCCEEEEEChHH-HHHHHHHHHHHcCCCCcEEEEEeeHHHhcCCCCcE
Confidence 45555566778999999999999999999998435999999996 99999999999999789999999999987 55799
Q ss_pred cEEEEcchhhhcC-hhhHHHHHHHHHhccccCcEEEE
Q 035870 698 DRIISCEMIEAVG-HEFMEEFFGCCESLLAEDGLLVL 733 (842)
Q Consensus 698 D~i~s~~~~~~~~-~~~~~~~~~~~~~~LkpgG~~~~ 733 (842)
|+|++..+..++. ...+..+++++.++|||||+++.
T Consensus 133 D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 169 (340)
T 2fyt_A 133 DVIISEWMGYFLLFESMLDSVLYAKNKYLAKGGSVYP 169 (340)
T ss_dssp EEEEECCCBTTBTTTCHHHHHHHHHHHHEEEEEEEES
T ss_pred EEEEEcCchhhccCHHHHHHHHHHHHhhcCCCcEEEc
Confidence 9999987533332 22478899999999999999983
No 178
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.48 E-value=1.2e-13 Score=140.28 Aligned_cols=112 Identities=23% Similarity=0.277 Sum_probs=97.3
Q ss_pred HHHHHHHHHcCCCCCCeEEEeccCchHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccC-CccC
Q 035870 616 RKVSLLIEKARVSKGQEVLEIGCGWGTLAIEIVKRTGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQ-LAKA 694 (842)
Q Consensus 616 ~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~-~~~~ 694 (842)
...+.+++.+.+.++.+|||||||+|.++..+++. +.+|+++|+|+++++.|++++...+ +++++++|+.+ ++.+
T Consensus 57 ~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~---~v~~~~~d~~~~~~~~ 132 (231)
T 1vbf_A 57 NLGIFMLDELDLHKGQKVLEIGTGIGYYTALIAEI-VDKVVSVEINEKMYNYASKLLSYYN---NIKLILGDGTLGYEEE 132 (231)
T ss_dssp HHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH-SSEEEEEESCHHHHHHHHHHHTTCS---SEEEEESCGGGCCGGG
T ss_pred HHHHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHH-cCEEEEEeCCHHHHHHHHHHHhhcC---CeEEEECCcccccccC
Confidence 44567788888899999999999999999999998 6899999999999999999987665 79999999887 3356
Q ss_pred CCccEEEEcchhhhcChhhHHHHHHHHHhccccCcEEEEEeecCC
Q 035870 695 NKYDRIISCEMIEAVGHEFMEEFFGCCESLLAEDGLLVLQFISIP 739 (842)
Q Consensus 695 ~~fD~i~s~~~~~~~~~~~~~~~~~~~~~~LkpgG~~~~~~~~~~ 739 (842)
++||+|++..+++|+.+ ++.++|||||++++......
T Consensus 133 ~~fD~v~~~~~~~~~~~--------~~~~~L~pgG~l~~~~~~~~ 169 (231)
T 1vbf_A 133 KPYDRVVVWATAPTLLC--------KPYEQLKEGGIMILPIGVGR 169 (231)
T ss_dssp CCEEEEEESSBBSSCCH--------HHHHTEEEEEEEEEEECSSS
T ss_pred CCccEEEECCcHHHHHH--------HHHHHcCCCcEEEEEEcCCC
Confidence 79999999999999864 58899999999999765443
No 179
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.48 E-value=2.4e-13 Score=147.36 Aligned_cols=118 Identities=17% Similarity=0.311 Sum_probs=100.1
Q ss_pred HHHHHHHHHcC--CCCCCeEEEeccCchHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCc-
Q 035870 616 RKVSLLIEKAR--VSKGQEVLEIGCGWGTLAIEIVKRTGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLA- 692 (842)
Q Consensus 616 ~~~~~l~~~l~--~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~- 692 (842)
..++.+.+.+. ..++.+|||+|||+|.++..+++. +.+|+++|+|+.+++.|+++++.+++. ++++++|+.+..
T Consensus 218 ~ll~~l~~~l~~~~~~~~~VLDlGcG~G~~~~~la~~-g~~V~gvDis~~al~~A~~n~~~~~~~--v~~~~~D~~~~~~ 294 (381)
T 3dmg_A 218 LLLEALQERLGPEGVRGRQVLDLGAGYGALTLPLARM-GAEVVGVEDDLASVLSLQKGLEANALK--AQALHSDVDEALT 294 (381)
T ss_dssp HHHHHHHHHHCTTTTTTCEEEEETCTTSTTHHHHHHT-TCEEEEEESBHHHHHHHHHHHHHTTCC--CEEEECSTTTTSC
T ss_pred HHHHHHHHhhcccCCCCCEEEEEeeeCCHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHHcCCC--eEEEEcchhhccc
Confidence 34445545442 347889999999999999999998 889999999999999999999998874 899999998887
Q ss_pred cCCCccEEEEcchhhh---cChhhHHHHHHHHHhccccCcEEEEEee
Q 035870 693 KANKYDRIISCEMIEA---VGHEFMEEFFGCCESLLAEDGLLVLQFI 736 (842)
Q Consensus 693 ~~~~fD~i~s~~~~~~---~~~~~~~~~~~~~~~~LkpgG~~~~~~~ 736 (842)
++++||+|+++.++++ ...+....+++++.++|||||++++...
T Consensus 295 ~~~~fD~Ii~npp~~~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~n 341 (381)
T 3dmg_A 295 EEARFDIIVTNPPFHVGGAVILDVAQAFVNVAAARLRPGGVFFLVSN 341 (381)
T ss_dssp TTCCEEEEEECCCCCTTCSSCCHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred cCCCeEEEEECCchhhcccccHHHHHHHHHHHHHhcCcCcEEEEEEc
Confidence 4589999999999888 3345688999999999999999999643
No 180
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.47 E-value=1.1e-13 Score=150.62 Aligned_cols=117 Identities=19% Similarity=0.227 Sum_probs=100.1
Q ss_pred HHHHHHcCCCCCCeEEEeccCchHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCccCCCcc
Q 035870 619 SLLIEKARVSKGQEVLEIGCGWGTLAIEIVKRTGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLAKANKYD 698 (842)
Q Consensus 619 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~~~fD 698 (842)
+.+.+.+...++.+|||||||+|.++..+++....+|+|+|+| .+++.|+++++.+++.++++++++|+.+++..++||
T Consensus 53 ~~i~~~~~~~~~~~VLDlGcGtG~ls~~la~~g~~~V~gvD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~D 131 (376)
T 3r0q_C 53 NAVFQNKHHFEGKTVLDVGTGSGILAIWSAQAGARKVYAVEAT-KMADHARALVKANNLDHIVEVIEGSVEDISLPEKVD 131 (376)
T ss_dssp HHHHTTTTTTTTCEEEEESCTTTHHHHHHHHTTCSEEEEEESS-TTHHHHHHHHHHTTCTTTEEEEESCGGGCCCSSCEE
T ss_pred HHHHhccccCCCCEEEEeccCcCHHHHHHHhcCCCEEEEEccH-HHHHHHHHHHHHcCCCCeEEEEECchhhcCcCCcce
Confidence 3455556678899999999999999999999833399999999 999999999999999888999999999988448999
Q ss_pred EEEEcchhhhcCh-hhHHHHHHHHHhccccCcEEEEEee
Q 035870 699 RIISCEMIEAVGH-EFMEEFFGCCESLLAEDGLLVLQFI 736 (842)
Q Consensus 699 ~i~s~~~~~~~~~-~~~~~~~~~~~~~LkpgG~~~~~~~ 736 (842)
+|++..+.+++.. ..+..+++.+.++|||||.+++...
T Consensus 132 ~Iv~~~~~~~l~~e~~~~~~l~~~~~~LkpgG~li~~~~ 170 (376)
T 3r0q_C 132 VIISEWMGYFLLRESMFDSVISARDRWLKPTGVMYPSHA 170 (376)
T ss_dssp EEEECCCBTTBTTTCTHHHHHHHHHHHEEEEEEEESSEE
T ss_pred EEEEcChhhcccchHHHHHHHHHHHhhCCCCeEEEEecC
Confidence 9999877666643 3478899999999999999987543
No 181
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.47 E-value=7.8e-14 Score=160.47 Aligned_cols=111 Identities=15% Similarity=0.253 Sum_probs=93.1
Q ss_pred CCCCeEEEeccCchHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCc---cCCCccEEEEcc
Q 035870 628 SKGQEVLEIGCGWGTLAIEIVKRTGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLA---KANKYDRIISCE 704 (842)
Q Consensus 628 ~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~---~~~~fD~i~s~~ 704 (842)
..+.+|||||||.|.++..+|+. |++|||||+|+.+++.|+..+.+.|.. +|+++++|++++. .+++||+|+|.+
T Consensus 65 ~~~~~vLDvGCG~G~~~~~la~~-ga~V~giD~~~~~i~~a~~~a~~~~~~-~~~~~~~~~~~~~~~~~~~~fD~v~~~e 142 (569)
T 4azs_A 65 GRPLNVLDLGCAQGFFSLSLASK-GATIVGIDFQQENINVCRALAEENPDF-AAEFRVGRIEEVIAALEEGEFDLAIGLS 142 (569)
T ss_dssp TSCCEEEEETCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHTSTTS-EEEEEECCHHHHHHHCCTTSCSEEEEES
T ss_pred CCCCeEEEECCCCcHHHHHHHhC-CCEEEEECCCHHHHHHHHHHHHhcCCC-ceEEEECCHHHHhhhccCCCccEEEECc
Confidence 35679999999999999999998 999999999999999999999887744 6999999999884 457999999999
Q ss_pred hhhhcChhhHHHHHHHHHhccccCcEEEEEeecCCC
Q 035870 705 MIEAVGHEFMEEFFGCCESLLAEDGLLVLQFISIPD 740 (842)
Q Consensus 705 ~~~~~~~~~~~~~~~~~~~~LkpgG~~~~~~~~~~~ 740 (842)
|+||+++......+..+.+.|+++|..++..+....
T Consensus 143 ~~ehv~~~~~~~~~~~~~~tl~~~~~~~~~~~~~~e 178 (569)
T 4azs_A 143 VFHHIVHLHGIDEVKRLLSRLADVTQAVILELAVKE 178 (569)
T ss_dssp CHHHHHHHHCHHHHHHHHHHHHHHSSEEEEECCCTT
T ss_pred chhcCCCHHHHHHHHHHHHHhccccceeeEEecccc
Confidence 999998743233355677778899888887765443
No 182
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.47 E-value=8.9e-14 Score=149.96 Aligned_cols=109 Identities=26% Similarity=0.293 Sum_probs=94.6
Q ss_pred cCCCCCCeEEEeccCchHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCc-cCCCccEEEEc
Q 035870 625 ARVSKGQEVLEIGCGWGTLAIEIVKRTGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLA-KANKYDRIISC 703 (842)
Q Consensus 625 l~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~-~~~~fD~i~s~ 703 (842)
..+.++.+|||||||+|.++..+++.+..+|+|+|+| ++++.|+++++.+++.++++++++|+.+++ ++++||+|++.
T Consensus 62 ~~~~~~~~VLDvGcG~G~~~~~la~~g~~~v~gvD~s-~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~Iis~ 140 (349)
T 3q7e_A 62 RHLFKDKVVLDVGSGTGILCMFAAKAGARKVIGIECS-SISDYAVKIVKANKLDHVVTIIKGKVEEVELPVEKVDIIISE 140 (349)
T ss_dssp HHHHTTCEEEEESCTTSHHHHHHHHTTCSEEEEEECS-THHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSSCEEEEEEC
T ss_pred cccCCCCEEEEEeccchHHHHHHHHCCCCEEEEECcH-HHHHHHHHHHHHcCCCCcEEEEECcHHHccCCCCceEEEEEc
Confidence 3446789999999999999999999844599999999 599999999999999888999999999987 66899999998
Q ss_pred chhhhcC-hhhHHHHHHHHHhccccCcEEEEE
Q 035870 704 EMIEAVG-HEFMEEFFGCCESLLAEDGLLVLQ 734 (842)
Q Consensus 704 ~~~~~~~-~~~~~~~~~~~~~~LkpgG~~~~~ 734 (842)
.+.+++. ...++.+++++.++|||||+++..
T Consensus 141 ~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~ 172 (349)
T 3q7e_A 141 WMGYCLFYESMLNTVLHARDKWLAPDGLIFPD 172 (349)
T ss_dssp CCBBTBTBTCCHHHHHHHHHHHEEEEEEEESC
T ss_pred cccccccCchhHHHHHHHHHHhCCCCCEEccc
Confidence 7755552 235889999999999999999853
No 183
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=99.47 E-value=2.2e-13 Score=149.18 Aligned_cols=191 Identities=16% Similarity=0.142 Sum_probs=105.4
Q ss_pred hhHHHHHHHHHhhhcCceEEeCCCeeEEEeCCCcEEEEeCCCcEEeCCEEEEccChHHHHHhhcCCCChHHHHhccccce
Q 035870 214 SHSYVNKVRKQLESWGCQIRTSSEVCSVLPADKGCTIVCGDGSREFYNSCVMALHAPDALKILGNQATFDETRILGAFQY 293 (842)
Q Consensus 214 ~~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VV~A~p~~~~~~ll~~~~~~~~~~~l~~~~~ 293 (842)
...+++.|.+.+++.|++|+.+++|++|..+++++.|++.+| ++.||.||+|+..+. ..+++. ++ -.+.
T Consensus 148 ~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~v~~~~g-~~~a~~vV~a~G~~s-~~l~~~-l~--------~~p~ 216 (372)
T 2uzz_A 148 SELAIKTWIQLAKEAGCAQLFNCPVTAIRHDDDGVTIETADG-EYQAKKAIVCAGTWV-KDLLPE-LP--------VQPV 216 (372)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSSEEEEESSC-EEEEEEEEECCGGGG-GGTSTT-CC--------CEEE
T ss_pred HHHHHHHHHHHHHHCCCEEEcCCEEEEEEEcCCEEEEEECCC-eEEcCEEEEcCCccH-Hhhccc-cC--------ceEE
Confidence 357889999999999999999999999999888899999888 599999999998774 234332 10 0011
Q ss_pred eeceEEEecCCCCcCCC-CCCcc------eeeecc-cCCCceEEEEEc-----cc---ccCC------CCCCCCeEEecC
Q 035870 294 VYSDIFLHRDKRFMPQN-PAAWS------AWNFLE-SFDSKVCLTYWL-----NV---LQNL------GETSLPFLVTLN 351 (842)
Q Consensus 294 ~~~~v~l~~~~~~~p~~-~~~~~------~~~~~~-~~~~~~~v~~~~-----~~---l~~l------~~~~~~~~~~l~ 351 (842)
....+++..+..+.... ...|. ...|.. .+++...+.... .. .... .+.+.+.+..+.
T Consensus 217 rg~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~y~~p~~~~~~~iG~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 296 (372)
T 2uzz_A 217 RKVFAWYQADGRYSVKNKFPAFTGELPNGDQYYGFPAENDALKIGKHNGGQVIHSADERVPFAEVVSDGSEAFPFLRNVL 296 (372)
T ss_dssp ECCEEEECCCGGGSTTTTCCEEEEECTTCCEEEEECCSSSCEEEEESSCCEECCSGGGCCCTTTSTTGGGSSHHHHHHHS
T ss_pred EEEEEEEEeccccCccccCCEEEEecCCCCeEEecCCCCCeEEEEecCCCCccCChhhccCCCCCHHHHHHHHHHHHHHC
Confidence 11111222111110000 00010 011211 123344443211 00 0000 001111222233
Q ss_pred CCCCCcceeEEEEcCCCCCCHHHHHHHHhhhhhcCCCCeEEeccccCCCCCchhHhHHHHHHHHhcCCccc
Q 035870 352 PDHVPEHTLLKWSTGHPVPSVAASKASLELDHIQGKRGIWFCGAYQGYGFHEDGLKAGMTAAHGVLGKSCT 422 (842)
Q Consensus 352 ~~~~~~~~~~~w~~~~p~~~~~~~~~~~~~~~~~~~~~l~~aG~~~g~G~~e~A~~SG~~aA~~Il~~~~~ 422 (842)
|... .+...|...+| .+++..+.+...+..+|+|++.+|.+.|+ ..|..+|+.+|+.|++.+.+
T Consensus 297 P~l~--~~~~~~~g~r~----~t~d~~p~ig~~~~~~~l~~~~G~~g~G~-~~ap~~g~~la~~i~~~~~~ 360 (372)
T 2uzz_A 297 PGIG--CCLYGAACTYD----NSPDEDFIIDTLPGHDNTLLITGLSGHGF-KFASVLGEIAADFAQDKKSD 360 (372)
T ss_dssp CSCC--CEEEECCCEEE----ECTTSCCCEEEETTEEEEEEECCCCSCCG-GGHHHHHHHHHHHHTTCCCS
T ss_pred CCCC--ccceeeEEeec----cCCCCCeEEecCCCCCCEEEEeCCCccch-hccHHHHHHHHHHHhCCCCC
Confidence 3322 23445533222 11222233333444579999999999999 89999999999999987643
No 184
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.46 E-value=2.5e-13 Score=137.60 Aligned_cols=169 Identities=11% Similarity=0.009 Sum_probs=119.6
Q ss_pred cHHHHHHHHHHHHHHHcCCC-CCCeEEEeccCc--hHHHHHHHHh--cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEE
Q 035870 609 DLKAAQMRKVSLLIEKARVS-KGQEVLEIGCGW--GTLAIEIVKR--TGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRL 683 (842)
Q Consensus 609 ~l~~aq~~~~~~l~~~l~~~-~~~~vLDiGcG~--G~~~~~la~~--~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~ 683 (842)
.+..+.+.++.+.++.+... ...+|||||||+ +..+..++++ ++++|+++|.|+.|++.|++++...+ ..++++
T Consensus 57 ~~a~~nr~fl~rav~~l~~~~g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~-~~~~~~ 135 (277)
T 3giw_A 57 VHMRANRDWMNRAVAHLAKEAGIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTP-EGRTAY 135 (277)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSCCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCS-SSEEEE
T ss_pred HHHHHHHHHHHHHHHHhccccCCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCC-CCcEEE
Confidence 45566677778887777533 446899999997 4455666654 78999999999999999999986543 247999
Q ss_pred EEccccCCc-----c--CCCcc-----EEEEcchhhhcChhh-HHHHHHHHHhccccCcEEEEEeecCCCcccccccCcc
Q 035870 684 YLCDYRQLA-----K--ANKYD-----RIISCEMIEAVGHEF-MEEFFGCCESLLAEDGLLVLQFISIPDERYNEYRLSS 750 (842)
Q Consensus 684 ~~~d~~~~~-----~--~~~fD-----~i~s~~~~~~~~~~~-~~~~~~~~~~~LkpgG~~~~~~~~~~~~~~~~~~~~~ 750 (842)
+++|+++.. + .+.|| .|+++.++||++++. +..+++++.+.|+|||+|++...+.+... +......
T Consensus 136 v~aD~~~~~~~l~~~~~~~~~D~~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~~~~d~~p-~~~~~~~ 214 (277)
T 3giw_A 136 VEADMLDPASILDAPELRDTLDLTRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLPSGSYLAMSIGTAEFAP-QEVGRVA 214 (277)
T ss_dssp EECCTTCHHHHHTCHHHHTTCCTTSCCEEEEESCGGGSCGGGCHHHHHHHHHTTSCTTCEEEEEEECCTTSH-HHHHHHH
T ss_pred EEecccChhhhhcccccccccCcCCcchHHhhhhHhcCCchhhHHHHHHHHHHhCCCCcEEEEEeccCCCCH-HHHHHHH
Confidence 999998863 1 35566 699999999999865 68999999999999999999887755321 1111111
Q ss_pred chhhhcccCCCCCCCHHHHHHHHhhcCCcEEEE
Q 035870 751 DFIKEYIFPGGCLPSLSRITSAMSVASRLCVEQ 783 (842)
Q Consensus 751 ~~~~~~i~p~~~~~~~~~~~~~~~~~~gf~v~~ 783 (842)
...+.--.| ..+.+.+++...+ .||++++
T Consensus 215 ~~~~~~g~p-~~~rs~~ei~~~f---~Glelve 243 (277)
T 3giw_A 215 REYAARNMP-MRLRTHAEAEEFF---EGLELVE 243 (277)
T ss_dssp HHHHHTTCC-CCCCCHHHHHHTT---TTSEECT
T ss_pred HHHHhcCCC-CccCCHHHHHHHh---CCCcccC
Confidence 111111112 2456788887655 3898643
No 185
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.46 E-value=1.9e-13 Score=148.96 Aligned_cols=121 Identities=12% Similarity=0.123 Sum_probs=98.5
Q ss_pred HHHHHHHHHcCCCCCCeEEEeccCchHHHHHHHHhcC-CEEEEEcCCHHHHHHH-------HHHHHHcCCC-CCeEEEEc
Q 035870 616 RKVSLLIEKARVSKGQEVLEIGCGWGTLAIEIVKRTG-CKYTGITLSEEQLKYA-------EMKVKEAGLQ-DLIRLYLC 686 (842)
Q Consensus 616 ~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~-~~v~gid~s~~~~~~a-------~~~~~~~~l~-~~v~~~~~ 686 (842)
..+..+++.+.++++.+|||||||+|.++..+|+..+ .+|+|+|+|+.+++.| +++++..|+. ++++++++
T Consensus 229 ~~v~~ml~~l~l~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~g 308 (433)
T 1u2z_A 229 NFLSDVYQQCQLKKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLK 308 (433)
T ss_dssp HHHHHHHHHTTCCTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEES
T ss_pred HHHHHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEc
Confidence 4556788888999999999999999999999999744 5899999999999999 8999888853 58999998
Q ss_pred cccCC----c-cCCCccEEEEcchhhhcChhhHHHHHHHHHhccccCcEEEEEeecCC
Q 035870 687 DYRQL----A-KANKYDRIISCEMIEAVGHEFMEEFFGCCESLLAEDGLLVLQFISIP 739 (842)
Q Consensus 687 d~~~~----~-~~~~fD~i~s~~~~~~~~~~~~~~~~~~~~~~LkpgG~~~~~~~~~~ 739 (842)
|.... + ..++||+|+++..+ +. ..+...++++.+.|||||++++.....+
T Consensus 309 D~~~~~~~~~~~~~~FDvIvvn~~l-~~--~d~~~~L~el~r~LKpGG~lVi~d~f~p 363 (433)
T 1u2z_A 309 KSFVDNNRVAELIPQCDVILVNNFL-FD--EDLNKKVEKILQTAKVGCKIISLKSLRS 363 (433)
T ss_dssp SCSTTCHHHHHHGGGCSEEEECCTT-CC--HHHHHHHHHHHTTCCTTCEEEESSCSSC
T ss_pred CccccccccccccCCCCEEEEeCcc-cc--ccHHHHHHHHHHhCCCCeEEEEeeccCC
Confidence 64422 1 24789999997665 22 3478889999999999999999754433
No 186
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.46 E-value=5.3e-13 Score=145.89 Aligned_cols=195 Identities=11% Similarity=0.016 Sum_probs=105.4
Q ss_pred hhHHHHHHHHHhhhcCceEEeCCCeeEEEeCCCc-EEEEeCCC--cEEeCCEEEEccChHHHHHhhcCC--CChHHHHhc
Q 035870 214 SHSYVNKVRKQLESWGCQIRTSSEVCSVLPADKG-CTIVCGDG--SREFYNSCVMALHAPDALKILGNQ--ATFDETRIL 288 (842)
Q Consensus 214 ~~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~-v~V~~~~G--~~~~ad~VV~A~p~~~~~~ll~~~--~~~~~~~~l 288 (842)
...+++.|.+.++++|++|+++++|++|..++++ +.|++.+| .++.||.||+|+..+. ..++... .+..
T Consensus 149 ~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~a~~VV~A~G~~s-~~l~~~~~g~~~~----- 222 (369)
T 3dme_A 149 SHALMLAYQGDAESDGAQLVFHTPLIAGRVRPEGGFELDFGGAEPMTLSCRVLINAAGLHA-PGLARRIEGIPRD----- 222 (369)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEECTTSSEEEEECTTSCEEEEEEEEEECCGGGH-HHHHHTEETSCGG-----
T ss_pred HHHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCceEEEEECCCceeEEEeCEEEECCCcch-HHHHHHhcCCCcc-----
Confidence 4689999999999999999999999999998776 88999888 4799999999998773 2333210 1100
Q ss_pred cccceeeceE-EEecCCCCcCCCCCCcc-------eeeecccCCCceEEEEEc---ccc-cCCCC----CCCCeEEecCC
Q 035870 289 GAFQYVYSDI-FLHRDKRFMPQNPAAWS-------AWNFLESFDSKVCLTYWL---NVL-QNLGE----TSLPFLVTLNP 352 (842)
Q Consensus 289 ~~~~~~~~~v-~l~~~~~~~p~~~~~~~-------~~~~~~~~~~~~~v~~~~---~~l-~~l~~----~~~~~~~~l~~ 352 (842)
...+..+.+- ++.++.+ .|.....+. ...+....++...+.... +.. ..... .+.+....+.|
T Consensus 223 ~~~~i~p~rG~~~~~~~~-~~~~~~~~~~p~~~~~~~~~~~~~~g~~~iG~t~e~~~~~~~~~~~~~~~~l~~~~~~~~P 301 (369)
T 3dme_A 223 SIPPEYLCKGSYFTLAGR-APFSRLIYPVPQHAGLGVHLTLDLGGQAKFGPDTEWIATEDYTLDPRRADVFYAAVRSYWP 301 (369)
T ss_dssp GSCCCEEEEEEEEECSSS-CSCSSEEEECTTCSSCCCCEEECTTSCEEECCCCEEESSCCCCCCGGGGGGHHHHHHTTCT
T ss_pred ccceeeecceEEEEECCC-CccCceeecCCCCCCceEEEeCccCCcEEECCCcccccccccccCHHHHHHHHHHHHHHCC
Confidence 0011112111 1222221 010000000 000100112222221100 100 00000 01111223444
Q ss_pred CCCCcceeEEEEcCCCCCC-HHHHHHHHhh-hh-hcCCCCeEEeccccCCCCCchhHhHHHHHHHHh
Q 035870 353 DHVPEHTLLKWSTGHPVPS-VAASKASLEL-DH-IQGKRGIWFCGAYQGYGFHEDGLKAGMTAAHGV 416 (842)
Q Consensus 353 ~~~~~~~~~~w~~~~p~~~-~~~~~~~~~~-~~-~~~~~~l~~aG~~~g~G~~e~A~~SG~~aA~~I 416 (842)
......+...|...+|... ++..+..+.+ .. .+..+|+|++.++.+.|+ ..|...|+.+|+.|
T Consensus 302 ~l~~~~v~~~w~G~Rp~~~~~~~~d~~p~i~g~~~~~~~~l~~~~G~~~~G~-t~ap~~a~~~a~~i 367 (369)
T 3dme_A 302 ALPDGALAPGYTGIRPKISGPHEPAADFAIAGPASHGVAGLVNLYGIESPGL-TASLAIAEETLARL 367 (369)
T ss_dssp TCCTTCCEEEEEEEEEESSCTTSCCCCCEEECHHHHCCTTEEEEECCCTTHH-HHHHHHHHHHHHHH
T ss_pred CCChhhceecceeccccccCCCCCcCCeEEecccccCCCCEEEEeCCCCchH-hccHHHHHHHHHHh
Confidence 4444456677877665421 1111112222 22 245689999999999999 89999999999987
No 187
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.46 E-value=1.2e-13 Score=142.02 Aligned_cols=120 Identities=12% Similarity=0.081 Sum_probs=95.2
Q ss_pred HHHHHHHHHcCCCCCCeEEEeccCchHHHHHHHHh---cCCEEEEEcCCHHHHHHHHHHHHHc---CCCCC---------
Q 035870 616 RKVSLLIEKARVSKGQEVLEIGCGWGTLAIEIVKR---TGCKYTGITLSEEQLKYAEMKVKEA---GLQDL--------- 680 (842)
Q Consensus 616 ~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~la~~---~~~~v~gid~s~~~~~~a~~~~~~~---~l~~~--------- 680 (842)
..++.+++.+...++.+|||+|||+|.++..+++. ++.+|+|+|+|+.+++.|++++... ++.++
T Consensus 38 ~l~~~~l~~~~~~~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~ 117 (250)
T 1o9g_A 38 EIFQRALARLPGDGPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSE 117 (250)
T ss_dssp HHHHHHHHTSSCCSCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcccCCCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhh
Confidence 34455666655556789999999999999999986 3679999999999999999988765 44322
Q ss_pred ----------------eE-------------EEEccccCCc------cCCCccEEEEcchhhhcCh-------hhHHHHH
Q 035870 681 ----------------IR-------------LYLCDYRQLA------KANKYDRIISCEMIEAVGH-------EFMEEFF 718 (842)
Q Consensus 681 ----------------v~-------------~~~~d~~~~~------~~~~fD~i~s~~~~~~~~~-------~~~~~~~ 718 (842)
++ ++++|+.+.. ...+||+|+++..+.+..+ +.+..++
T Consensus 118 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l 197 (250)
T 1o9g_A 118 RFGKPSYLEAAQAARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLL 197 (250)
T ss_dssp HHCCHHHHHHHHHHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHH
T ss_pred hcccccchhhhhhhhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHH
Confidence 66 9999987754 2348999999987766543 4567999
Q ss_pred HHHHhccccCcEEEEEe
Q 035870 719 GCCESLLAEDGLLVLQF 735 (842)
Q Consensus 719 ~~~~~~LkpgG~~~~~~ 735 (842)
+++.++|||||++++..
T Consensus 198 ~~~~~~LkpgG~l~~~~ 214 (250)
T 1o9g_A 198 RSLASALPAHAVIAVTD 214 (250)
T ss_dssp HHHHHHSCTTCEEEEEE
T ss_pred HHHHHhcCCCcEEEEeC
Confidence 99999999999999843
No 188
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.46 E-value=3e-13 Score=135.59 Aligned_cols=107 Identities=23% Similarity=0.337 Sum_probs=90.8
Q ss_pred CCCCeEEEeccCchHHHHHHHHh-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCc---cCCCccEEEEc
Q 035870 628 SKGQEVLEIGCGWGTLAIEIVKR-TGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLA---KANKYDRIISC 703 (842)
Q Consensus 628 ~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~---~~~~fD~i~s~ 703 (842)
.++.+|||||||+|.++..+++. ++.+|+|+|+|+.+++.|++++...++ ++++++++|+.+++ ++++||.|+++
T Consensus 40 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~~-~~v~~~~~d~~~~~~~~~~~~~D~i~~~ 118 (214)
T 1yzh_A 40 NDNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGV-PNIKLLWVDGSDLTDYFEDGEIDRLYLN 118 (214)
T ss_dssp SCCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCC-SSEEEEECCSSCGGGTSCTTCCSEEEEE
T ss_pred CCCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcCC-CCEEEEeCCHHHHHhhcCCCCCCEEEEE
Confidence 46789999999999999999988 578999999999999999999999888 48999999998865 45789999998
Q ss_pred chhhhcChh------hHHHHHHHHHhccccCcEEEEEe
Q 035870 704 EMIEAVGHE------FMEEFFGCCESLLAEDGLLVLQF 735 (842)
Q Consensus 704 ~~~~~~~~~------~~~~~~~~~~~~LkpgG~~~~~~ 735 (842)
....+.... ....+++++.++|||||.+++.+
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 156 (214)
T 1yzh_A 119 FSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKT 156 (214)
T ss_dssp SCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEE
T ss_pred CCCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEe
Confidence 764432211 13689999999999999999853
No 189
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.46 E-value=4.4e-13 Score=133.89 Aligned_cols=106 Identities=20% Similarity=0.210 Sum_probs=91.8
Q ss_pred CCCCCeEEEeccCchHHHHHHHHh-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCc-cCCCccEEEEcc
Q 035870 627 VSKGQEVLEIGCGWGTLAIEIVKR-TGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLA-KANKYDRIISCE 704 (842)
Q Consensus 627 ~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~-~~~~fD~i~s~~ 704 (842)
++++.+|||||||+|.+++.+++. +..+|+++|+|+.+++.|+++++.+|+.++|+++++|..+.. ++.+||+|++.+
T Consensus 19 v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~~~~~~~D~Iviag 98 (244)
T 3gnl_A 19 ITKNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVIEKKDAIDTIVIAG 98 (244)
T ss_dssp CCSSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEE
T ss_pred CCCCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhccCccccccEEEEeC
Confidence 468899999999999999999998 345899999999999999999999999888999999987765 333699999876
Q ss_pred hhhhcChhhHHHHHHHHHhccccCcEEEEEee
Q 035870 705 MIEAVGHEFMEEFFGCCESLLAEDGLLVLQFI 736 (842)
Q Consensus 705 ~~~~~~~~~~~~~~~~~~~~LkpgG~~~~~~~ 736 (842)
|.-. ....++.+..+.|+++|+++++..
T Consensus 99 mGg~----lI~~IL~~~~~~L~~~~~lIlq~~ 126 (244)
T 3gnl_A 99 MGGT----LIRTILEEGAAKLAGVTKLILQPN 126 (244)
T ss_dssp ECHH----HHHHHHHHTGGGGTTCCEEEEEES
T ss_pred CchH----HHHHHHHHHHHHhCCCCEEEEEcC
Confidence 6443 377889999999999999999764
No 190
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.46 E-value=9.3e-13 Score=131.69 Aligned_cols=146 Identities=15% Similarity=0.083 Sum_probs=100.1
Q ss_pred HHHHHc---CCCCCCeEEEeccCchHHHHHHHHh--cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCc--
Q 035870 620 LLIEKA---RVSKGQEVLEIGCGWGTLAIEIVKR--TGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLA-- 692 (842)
Q Consensus 620 ~l~~~l---~~~~~~~vLDiGcG~G~~~~~la~~--~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~-- 692 (842)
.++..+ .+++|++|||+|||+|.++.++|+. +..+|+++|+|+.|++...+..+.. .++.++++|++...
T Consensus 64 ~ll~~l~~~~l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r---~nv~~i~~Da~~~~~~ 140 (232)
T 3id6_C 64 AILKGLKTNPIRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRR---PNIFPLLADARFPQSY 140 (232)
T ss_dssp HHHTTCSCCSCCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHC---TTEEEEECCTTCGGGT
T ss_pred HHHhhhhhcCCCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhc---CCeEEEEcccccchhh
Confidence 444444 4889999999999999999999987 4579999999999986665555443 38999999987643
Q ss_pred --cCCCccEEEEcchhhhcChhhHHHHHHHHHhccccCcEEEEEeecCCCcccccccCccchhhhcccCCCCCCCHHHHH
Q 035870 693 --KANKYDRIISCEMIEAVGHEFMEEFFGCCESLLAEDGLLVLQFISIPDERYNEYRLSSDFIKEYIFPGGCLPSLSRIT 770 (842)
Q Consensus 693 --~~~~fD~i~s~~~~~~~~~~~~~~~~~~~~~~LkpgG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~ 770 (842)
..++||+|++.... ++ ....+...++++|||||++++..-....+. -+.|.. ...+..
T Consensus 141 ~~~~~~~D~I~~d~a~---~~-~~~il~~~~~~~LkpGG~lvisik~~~~d~-------------t~~~~e---~~~~~~ 200 (232)
T 3id6_C 141 KSVVENVDVLYVDIAQ---PD-QTDIAIYNAKFFLKVNGDMLLVIKARSIDV-------------TKDPKE---IYKTEV 200 (232)
T ss_dssp TTTCCCEEEEEECCCC---TT-HHHHHHHHHHHHEEEEEEEEEEEC--------------------CCSSS---STTHHH
T ss_pred hccccceEEEEecCCC---hh-HHHHHHHHHHHhCCCCeEEEEEEccCCccc-------------CCCHHH---HHHHHH
Confidence 23689999998543 22 234455667779999999999632211000 000110 113444
Q ss_pred HHHhhcCCcEEEEEEecCc
Q 035870 771 SAMSVASRLCVEQVENIGI 789 (842)
Q Consensus 771 ~~~~~~~gf~v~~~~~~~~ 789 (842)
+.+.+ .||++.+..++.+
T Consensus 201 ~~L~~-~gf~~~~~~~l~p 218 (232)
T 3id6_C 201 EKLEN-SNFETIQIINLDP 218 (232)
T ss_dssp HHHHH-TTEEEEEEEECTT
T ss_pred HHHHH-CCCEEEEEeccCC
Confidence 56665 7999999887743
No 191
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=99.45 E-value=5.9e-13 Score=146.39 Aligned_cols=190 Identities=11% Similarity=0.037 Sum_probs=105.7
Q ss_pred hHHHHHHHHHhhhcCceEEeCCCeeEEEeCCCcEEEEeCCCcEEeCCEEEEccChHHHHHhhcCCCChHHHHhcccccee
Q 035870 215 HSYVNKVRKQLESWGCQIRTSSEVCSVLPADKGCTIVCGDGSREFYNSCVMALHAPDALKILGNQATFDETRILGAFQYV 294 (842)
Q Consensus 215 ~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VV~A~p~~~~~~ll~~~~~~~~~~~l~~~~~~ 294 (842)
..+.+.|.+.+++.|++|+++++|++|..++++|.|++.+| ++.||.||+|++.+.. .+++. .. ..++..
T Consensus 164 ~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~~~~~v~~~~g-~~~a~~vV~A~G~~s~-~l~~~-~~-------~~~~~~ 233 (382)
T 1ryi_A 164 YFVCKAYVKAAKMLGAEIFEHTPVLHVERDGEALFIKTPSG-DVWANHVVVASGVWSG-MFFKQ-LG-------LNNAFL 233 (382)
T ss_dssp HHHHHHHHHHHHHTTCEEETTCCCCEEECSSSSEEEEETTE-EEEEEEEEECCGGGTH-HHHHH-TT-------CCCCCE
T ss_pred HHHHHHHHHHHHHCCCEEEcCCcEEEEEEECCEEEEEcCCc-eEEcCEEEECCChhHH-HHHHh-cC-------CCCcee
Confidence 57899999999999999999999999999888898888887 8999999999987632 22211 00 011222
Q ss_pred ec---eEEEecCCCCcCCCCCCcceeeecc-cCCCceEEEEEcc--ccc-CCCC----CCCCeEEecCCCCCCcceeEEE
Q 035870 295 YS---DIFLHRDKRFMPQNPAAWSAWNFLE-SFDSKVCLTYWLN--VLQ-NLGE----TSLPFLVTLNPDHVPEHTLLKW 363 (842)
Q Consensus 295 ~~---~v~l~~~~~~~p~~~~~~~~~~~~~-~~~~~~~v~~~~~--~l~-~l~~----~~~~~~~~l~~~~~~~~~~~~w 363 (842)
+. .+.+......+ ....+....|.. .+++...+..... ... .... .+.+.+..+.|......+...|
T Consensus 234 ~~~g~~~~~~~~~~~~--~~~~~~~~~~~~p~~~g~~~vG~~~~~~~~~~~~~~~~~~~l~~~~~~~~p~l~~~~~~~~w 311 (382)
T 1ryi_A 234 PVKGECLSVWNDDIPL--TKTLYHDHCYIVPRKSGRLVVGATMKPGDWSETPDLGGLESVMKKAKTMLPAIQNMKVDRFW 311 (382)
T ss_dssp EEEEEEEEEECCSSCC--CSEEEETTEEEEECTTSEEEEECCCEETCCCCSCCHHHHHHHHHHHHHHCGGGGGSEEEEEE
T ss_pred ccceEEEEECCCCCCc--cceEEcCCEEEEEcCCCeEEEeecccccCCCCCCCHHHHHHHHHHHHHhCCCcCCCceeeEE
Confidence 21 11222111111 111111111211 1233343332111 000 0000 0011112233332222355667
Q ss_pred EcCCCCCCHHHHHHHHhhhhhcCCCCeEEeccccCCCCCchhHhHHHHHHHHhcCCcc
Q 035870 364 STGHPVPSVAASKASLELDHIQGKRGIWFCGAYQGYGFHEDGLKAGMTAAHGVLGKSC 421 (842)
Q Consensus 364 ~~~~p~~~~~~~~~~~~~~~~~~~~~l~~aG~~~g~G~~e~A~~SG~~aA~~Il~~~~ 421 (842)
...+|.-. +..+.+...+..+|+|+++++.|.|+ ..|..+|+.+|+.|++...
T Consensus 312 ~g~~~~t~----d~~p~ig~~~~~~~l~~~~G~~g~G~-~~a~~~g~~la~~i~~~~~ 364 (382)
T 1ryi_A 312 AGLRPGTK----DGKPYIGRHPEDSRILFAAGHFRNGI-LLAPATGALISDLIMNKEV 364 (382)
T ss_dssp EEEEEECS----SSCCEEEEETTEEEEEEEECCSSCTT-TTHHHHHHHHHHHHTTCCC
T ss_pred EEecccCC----CCCcEeccCCCcCCEEEEEcCCcchH-HHhHHHHHHHHHHHhCCCC
Confidence 55433211 11122222333579999999999999 8999999999999998763
No 192
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.45 E-value=2.5e-13 Score=141.83 Aligned_cols=110 Identities=19% Similarity=0.267 Sum_probs=91.6
Q ss_pred HHHHHHcCCCCCCeEEEeccCchHHHHHHHHh--cCCEEEEEcCCHHHHHHHHHHHHHc-CCCCCeEEEEccccCCccCC
Q 035870 619 SLLIEKARVSKGQEVLEIGCGWGTLAIEIVKR--TGCKYTGITLSEEQLKYAEMKVKEA-GLQDLIRLYLCDYRQLAKAN 695 (842)
Q Consensus 619 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~la~~--~~~~v~gid~s~~~~~~a~~~~~~~-~l~~~v~~~~~d~~~~~~~~ 695 (842)
..+++.+.++++.+|||+|||+|.++..+++. ++.+|+++|+|+++++.|+++++.. |. ++++++++|+.+..+++
T Consensus 100 ~~~~~~~~~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~-~~v~~~~~d~~~~~~~~ 178 (275)
T 1yb2_A 100 SYIIMRCGLRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDI-GNVRTSRSDIADFISDQ 178 (275)
T ss_dssp ------CCCCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCC-TTEEEECSCTTTCCCSC
T ss_pred HHHHHHcCCCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCC-CcEEEEECchhccCcCC
Confidence 46677788899999999999999999999987 4789999999999999999999887 75 48999999998844567
Q ss_pred CccEEEEcchhhhcChhhHHHHHHHHHhccccCcEEEEEee
Q 035870 696 KYDRIISCEMIEAVGHEFMEEFFGCCESLLAEDGLLVLQFI 736 (842)
Q Consensus 696 ~fD~i~s~~~~~~~~~~~~~~~~~~~~~~LkpgG~~~~~~~ 736 (842)
+||+|++ ++++ ...+++++.++|||||++++.+.
T Consensus 179 ~fD~Vi~-----~~~~--~~~~l~~~~~~LkpgG~l~i~~~ 212 (275)
T 1yb2_A 179 MYDAVIA-----DIPD--PWNHVQKIASMMKPGSVATFYLP 212 (275)
T ss_dssp CEEEEEE-----CCSC--GGGSHHHHHHTEEEEEEEEEEES
T ss_pred CccEEEE-----cCcC--HHHHHHHHHHHcCCCCEEEEEeC
Confidence 8999998 4544 57899999999999999999653
No 193
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.45 E-value=2.3e-13 Score=134.88 Aligned_cols=105 Identities=17% Similarity=0.165 Sum_probs=88.5
Q ss_pred CCCeEEEeccCchHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCC-c-cCCCccEEEEcchh
Q 035870 629 KGQEVLEIGCGWGTLAIEIVKRTGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQL-A-KANKYDRIISCEMI 706 (842)
Q Consensus 629 ~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~-~-~~~~fD~i~s~~~~ 706 (842)
++.+|||+|||+|.++..++++...+|+++|+|+++++.|+++++.+++ ++++++++|+.+. + ..++||+|+++..+
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~~~~~V~~vD~s~~~l~~a~~~~~~~~~-~~v~~~~~D~~~~~~~~~~~fD~V~~~~p~ 132 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIKNLATLKA-GNARVVNSNAMSFLAQKGTPHNIVFVDPPF 132 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTC-CSEEEECSCHHHHHSSCCCCEEEEEECCSS
T ss_pred CCCeEEEeCCCcCHHHHHHHhcCCCEEEEEECCHHHHHHHHHHHHHcCC-CcEEEEECCHHHHHhhcCCCCCEEEECCCC
Confidence 6789999999999999998877335999999999999999999999988 5899999998774 3 45789999998874
Q ss_pred hhcChhhHHHHHHHHHh--ccccCcEEEEEeec
Q 035870 707 EAVGHEFMEEFFGCCES--LLAEDGLLVLQFIS 737 (842)
Q Consensus 707 ~~~~~~~~~~~~~~~~~--~LkpgG~~~~~~~~ 737 (842)
+ .+ ....+++.+.+ +|||||++++....
T Consensus 133 ~-~~--~~~~~l~~l~~~~~L~pgG~l~i~~~~ 162 (202)
T 2fpo_A 133 R-RG--LLEETINLLEDNGWLADEALIYVESEV 162 (202)
T ss_dssp S-TT--THHHHHHHHHHTTCEEEEEEEEEEEEG
T ss_pred C-CC--cHHHHHHHHHhcCccCCCcEEEEEECC
Confidence 4 33 36778888865 59999999987654
No 194
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.45 E-value=2.1e-13 Score=137.99 Aligned_cols=130 Identities=17% Similarity=0.223 Sum_probs=99.5
Q ss_pred CCCCeEEEeccCchHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccc-cCCc-c-CCCccEEEEcc
Q 035870 628 SKGQEVLEIGCGWGTLAIEIVKRTGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDY-RQLA-K-ANKYDRIISCE 704 (842)
Q Consensus 628 ~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~-~~~~-~-~~~fD~i~s~~ 704 (842)
+++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.++++ ..+++++++|+ ..++ + +++||+|+++.
T Consensus 47 ~~~~~vLDiGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~------~~~~~~~~~d~~~~~~~~~~~~fD~v~~~~ 119 (226)
T 3m33_A 47 TPQTRVLEAGCGHGPDAARFGPQ-AARWAAYDFSPELLKLARAN------APHADVYEWNGKGELPAGLGAPFGLIVSRR 119 (226)
T ss_dssp CTTCEEEEESCTTSHHHHHHGGG-SSEEEEEESCHHHHHHHHHH------CTTSEEEECCSCSSCCTTCCCCEEEEEEES
T ss_pred CCCCeEEEeCCCCCHHHHHHHHc-CCEEEEEECCHHHHHHHHHh------CCCceEEEcchhhccCCcCCCCEEEEEeCC
Confidence 67899999999999999999998 88999999999999999988 13799999999 4565 4 68999999972
Q ss_pred hhhhcChhhHHHHHHHHHhccccCcEEEEEeecCCCcccccccCccchhhhcccCCCCCCCHHHHHHHHhhcCCcEEEEE
Q 035870 705 MIEAVGHEFMEEFFGCCESLLAEDGLLVLQFISIPDERYNEYRLSSDFIKEYIFPGGCLPSLSRITSAMSVASRLCVEQV 784 (842)
Q Consensus 705 ~~~~~~~~~~~~~~~~~~~~LkpgG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~gf~v~~~ 784 (842)
.+..+++++.++|||||+++.. . ...+..++.+.+.+ +||.+..+
T Consensus 120 --------~~~~~l~~~~~~LkpgG~l~~~--~------------------------~~~~~~~~~~~l~~-~Gf~~~~~ 164 (226)
T 3m33_A 120 --------GPTSVILRLPELAAPDAHFLYV--G------------------------PRLNVPEVPERLAA-VGWDIVAE 164 (226)
T ss_dssp --------CCSGGGGGHHHHEEEEEEEEEE--E------------------------SSSCCTHHHHHHHH-TTCEEEEE
T ss_pred --------CHHHHHHHHHHHcCCCcEEEEe--C------------------------CcCCHHHHHHHHHH-CCCeEEEE
Confidence 2578899999999999999910 0 01134456666666 89998776
Q ss_pred EecCcc-HHHHHHHHH
Q 035870 785 ENIGIH-YYQTLRCWR 799 (842)
Q Consensus 785 ~~~~~~-y~~tl~~w~ 799 (842)
...... +.++...|.
T Consensus 165 ~~~~~~~~~~~~~~~~ 180 (226)
T 3m33_A 165 DHVSVLAHAPTWEDWQ 180 (226)
T ss_dssp EEEEEEEEECSHHHHH
T ss_pred EeeeecccCcCHHHHh
Confidence 654321 123445553
No 195
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.44 E-value=2.2e-13 Score=138.20 Aligned_cols=105 Identities=15% Similarity=0.150 Sum_probs=87.7
Q ss_pred HHHcCCCCCCeEEEeccCchHHHHHHHHhc-CCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccC----CccCCC
Q 035870 622 IEKARVSKGQEVLEIGCGWGTLAIEIVKRT-GCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQ----LAKANK 696 (842)
Q Consensus 622 ~~~l~~~~~~~vLDiGcG~G~~~~~la~~~-~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~----~~~~~~ 696 (842)
++.+.++++.+|||+|||+|.++..+++.. ..+|+|+|+|+++++.|+++++.. +++.++++|+.+ .+..++
T Consensus 67 l~~~~~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~---~~v~~~~~d~~~~~~~~~~~~~ 143 (230)
T 1fbn_A 67 LKVMPIKRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAER---ENIIPILGDANKPQEYANIVEK 143 (230)
T ss_dssp CCCCCCCTTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTC---TTEEEEECCTTCGGGGTTTSCC
T ss_pred ccccCCCCCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcC---CCeEEEECCCCCcccccccCcc
Confidence 555667889999999999999999999983 479999999999999999987654 489999999987 553378
Q ss_pred ccEEEEcchhhhcCh-hhHHHHHHHHHhccccCcEEEEE
Q 035870 697 YDRIISCEMIEAVGH-EFMEEFFGCCESLLAEDGLLVLQ 734 (842)
Q Consensus 697 fD~i~s~~~~~~~~~-~~~~~~~~~~~~~LkpgG~~~~~ 734 (842)
||+|+. ++++ +....+++++.++|||||++++.
T Consensus 144 ~D~v~~-----~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 177 (230)
T 1fbn_A 144 VDVIYE-----DVAQPNQAEILIKNAKWFLKKGGYGMIA 177 (230)
T ss_dssp EEEEEE-----CCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEEEE-----ecCChhHHHHHHHHHHHhCCCCcEEEEE
Confidence 999993 3433 22477899999999999999996
No 196
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.44 E-value=1.5e-13 Score=147.24 Aligned_cols=107 Identities=23% Similarity=0.294 Sum_probs=91.8
Q ss_pred CCCCCeEEEeccCchHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCccCCCccEEEEcchh
Q 035870 627 VSKGQEVLEIGCGWGTLAIEIVKRTGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLAKANKYDRIISCEMI 706 (842)
Q Consensus 627 ~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~~~fD~i~s~~~~ 706 (842)
..+|++|||||||+|.++..+|+....+|++||.|+ +++.|++.++.+|+.++|+++.+|++++..+++||+|||..+-
T Consensus 81 ~~~~k~VLDvG~GtGiLs~~Aa~aGA~~V~ave~s~-~~~~a~~~~~~n~~~~~i~~i~~~~~~~~lpe~~DvivsE~~~ 159 (376)
T 4hc4_A 81 ALRGKTVLDVGAGTGILSIFCAQAGARRVYAVEASA-IWQQAREVVRFNGLEDRVHVLPGPVETVELPEQVDAIVSEWMG 159 (376)
T ss_dssp HHTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-THHHHHHHHHHTTCTTTEEEEESCTTTCCCSSCEEEEECCCCB
T ss_pred hcCCCEEEEeCCCccHHHHHHHHhCCCEEEEEeChH-HHHHHHHHHHHcCCCceEEEEeeeeeeecCCccccEEEeeccc
Confidence 347889999999999999999987445899999996 8999999999999999999999999998855799999996654
Q ss_pred hhcChh-hHHHHHHHHHhccccCcEEEEE
Q 035870 707 EAVGHE-FMEEFFGCCESLLAEDGLLVLQ 734 (842)
Q Consensus 707 ~~~~~~-~~~~~~~~~~~~LkpgG~~~~~ 734 (842)
..+..+ .++.++....++|||||.++-.
T Consensus 160 ~~l~~e~~l~~~l~a~~r~Lkp~G~~iP~ 188 (376)
T 4hc4_A 160 YGLLHESMLSSVLHARTKWLKEGGLLLPA 188 (376)
T ss_dssp TTBTTTCSHHHHHHHHHHHEEEEEEEESC
T ss_pred ccccccchhhhHHHHHHhhCCCCceECCc
Confidence 444333 5889999999999999998753
No 197
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.44 E-value=9.7e-13 Score=144.67 Aligned_cols=191 Identities=13% Similarity=0.094 Sum_probs=106.7
Q ss_pred hhHHHHHHHHHhhhcCceEEeCCCeeEEEeCCCcEE-EEeCCCcEEeCCEEEEccChHH--HHHhhcCCCChHHHHhccc
Q 035870 214 SHSYVNKVRKQLESWGCQIRTSSEVCSVLPADKGCT-IVCGDGSREFYNSCVMALHAPD--ALKILGNQATFDETRILGA 290 (842)
Q Consensus 214 ~~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v~-V~~~~G~~~~ad~VV~A~p~~~--~~~ll~~~~~~~~~~~l~~ 290 (842)
...+++.|.+.+++.|++|+++++|++|..++++|. |++.+| ++.||.||+|+..+. +.+.+.... .
T Consensus 148 ~~~l~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~v~gv~~~~g-~i~a~~VV~A~G~~s~~l~~~~g~~~---------~ 217 (382)
T 1y56_B 148 PFEATTAFAVKAKEYGAKLLEYTEVKGFLIENNEIKGVKTNKG-IIKTGIVVNATNAWANLINAMAGIKT---------K 217 (382)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEETTE-EEECSEEEECCGGGHHHHHHHHTCCS---------C
T ss_pred HHHHHHHHHHHHHHCCCEEECCceEEEEEEECCEEEEEEECCc-EEECCEEEECcchhHHHHHHHcCCCc---------C
Confidence 467889999999999999999999999999988887 888888 899999999998764 222222110 0
Q ss_pred cceeeceE-EEecCCC-CcCCCCCCcc---eeeecc-cCCCceEEEE-EcccccCCCCC--------CCCeEEecCCCCC
Q 035870 291 FQYVYSDI-FLHRDKR-FMPQNPAAWS---AWNFLE-SFDSKVCLTY-WLNVLQNLGET--------SLPFLVTLNPDHV 355 (842)
Q Consensus 291 ~~~~~~~v-~l~~~~~-~~p~~~~~~~---~~~~~~-~~~~~~~v~~-~~~~l~~l~~~--------~~~~~~~l~~~~~ 355 (842)
++..+.+. ++.++.. -+......+. ...|.. .+++ ..+.. ........... +.+.+..+.|...
T Consensus 218 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~y~~p~~~g-~~iG~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~p~l~ 296 (382)
T 1y56_B 218 IPIEPYKHQAVITQPIKRGTINPMVISFKYGHAYLTQTFHG-GIIGGIGYEIGPTYDLTPTYEFLREVSYYFTKIIPALK 296 (382)
T ss_dssp CCCEEEEEEEEEECCCSTTSSCSEEEESTTTTEEEECCSSS-CCEEECSCCBSSCCCCCCCHHHHHHHHHHHHHHCGGGG
T ss_pred cCCCeeEeEEEEEccCCcccCCCeEEecCCCeEEEEEeCCe-EEEecCCCCCCCCCCCCCCHHHHHHHHHHHHHhCCCcC
Confidence 12222111 1112211 0001011110 011111 1223 33332 11100010000 0111122233322
Q ss_pred CcceeEEEEcCCCCCCHHHHHHHHhhhhhcCCCCeEEeccccCCCCCchhHhHHHHHHHHhcCCc
Q 035870 356 PEHTLLKWSTGHPVPSVAASKASLELDHIQGKRGIWFCGAYQGYGFHEDGLKAGMTAAHGVLGKS 420 (842)
Q Consensus 356 ~~~~~~~w~~~~p~~~~~~~~~~~~~~~~~~~~~l~~aG~~~g~G~~e~A~~SG~~aA~~Il~~~ 420 (842)
...+...|...+|.- .+..+.+...+..+|+|++.+|.|.|+ ..|..+|+.+|+.|++..
T Consensus 297 ~~~~~~~~~g~r~~t----~d~~p~ig~~~~~~~~~~~~G~~g~G~-~~a~~~g~~la~~i~~~~ 356 (382)
T 1y56_B 297 NLLILRTWAGYYAKT----PDSNPAIGRIEELNDYYIAAGFSGHGF-MMAPAVGEMVAELITKGK 356 (382)
T ss_dssp GSEEEEEEEEEEEEC----TTSCCEEEEESSSBTEEEEECCTTCHH-HHHHHHHHHHHHHHHHSS
T ss_pred CCCceEEEEeccccC----CCCCcEeccCCCCCCEEEEEecCcchH-hhhHHHHHHHHHHHhCCC
Confidence 333556776544421 122233333444689999999999999 899999999999999876
No 198
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.44 E-value=4.7e-13 Score=128.66 Aligned_cols=120 Identities=13% Similarity=0.097 Sum_probs=95.2
Q ss_pred CCCCeEEEeccCchHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCccCCCccEEEEcchhh
Q 035870 628 SKGQEVLEIGCGWGTLAIEIVKRTGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLAKANKYDRIISCEMIE 707 (842)
Q Consensus 628 ~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~~~fD~i~s~~~~~ 707 (842)
.++.+|||+|||+|.++..+++. + +|+|+|+|+.+++. ..+++++++|+.+..++++||+|+++..++
T Consensus 22 ~~~~~vLD~GcG~G~~~~~l~~~-~-~v~gvD~s~~~~~~----------~~~~~~~~~d~~~~~~~~~fD~i~~n~~~~ 89 (170)
T 3q87_B 22 LEMKIVLDLGTSTGVITEQLRKR-N-TVVSTDLNIRALES----------HRGGNLVRADLLCSINQESVDVVVFNPPYV 89 (170)
T ss_dssp CCSCEEEEETCTTCHHHHHHTTT-S-EEEEEESCHHHHHT----------CSSSCEEECSTTTTBCGGGCSEEEECCCCB
T ss_pred CCCCeEEEeccCccHHHHHHHhc-C-cEEEEECCHHHHhc----------ccCCeEEECChhhhcccCCCCEEEECCCCc
Confidence 56779999999999999999988 5 99999999999987 237899999998854558999999999888
Q ss_pred hcChh-------hHHHHHHHHHhccccCcEEEEEeecCCCcccccccCccchhhhcccCCCCCCCHHHHHHHHhhcCCcE
Q 035870 708 AVGHE-------FMEEFFGCCESLLAEDGLLVLQFISIPDERYNEYRLSSDFIKEYIFPGGCLPSLSRITSAMSVASRLC 780 (842)
Q Consensus 708 ~~~~~-------~~~~~~~~~~~~LkpgG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~gf~ 780 (842)
+.++. ....+++++.+.| |||++++..... ....++.+.+.+ +||+
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~~~-------------------------~~~~~l~~~l~~-~gf~ 142 (170)
T 3q87_B 90 PDTDDPIIGGGYLGREVIDRFVDAV-TVGMLYLLVIEA-------------------------NRPKEVLARLEE-RGYG 142 (170)
T ss_dssp TTCCCTTTBCCGGGCHHHHHHHHHC-CSSEEEEEEEGG-------------------------GCHHHHHHHHHH-TTCE
T ss_pred cCCccccccCCcchHHHHHHHHhhC-CCCEEEEEEecC-------------------------CCHHHHHHHHHH-CCCc
Confidence 65432 3467788888888 999999865332 134566666666 7998
Q ss_pred EEEEEe
Q 035870 781 VEQVEN 786 (842)
Q Consensus 781 v~~~~~ 786 (842)
+..+..
T Consensus 143 ~~~~~~ 148 (170)
T 3q87_B 143 TRILKV 148 (170)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 877655
No 199
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.44 E-value=3.4e-13 Score=137.34 Aligned_cols=114 Identities=23% Similarity=0.270 Sum_probs=96.6
Q ss_pred HHHHHHHHHcCCCCCCeEEEeccCchHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccc-CCccC
Q 035870 616 RKVSLLIEKARVSKGQEVLEIGCGWGTLAIEIVKRTGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYR-QLAKA 694 (842)
Q Consensus 616 ~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~-~~~~~ 694 (842)
.....+++.+.+.++.+|||||||+|.++..+++..+.+|+++|+|+++++.|++++...++. +++++.+|.. .++..
T Consensus 78 ~~~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~~~ 156 (235)
T 1jg1_A 78 HMVAIMLEIANLKPGMNILEVGTGSGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGVK-NVHVILGDGSKGFPPK 156 (235)
T ss_dssp HHHHHHHHHHTCCTTCCEEEECCTTSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTCC-SEEEEESCGGGCCGGG
T ss_pred HHHHHHHHhcCCCCCCEEEEEeCCcCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCC-CcEEEECCcccCCCCC
Confidence 344567777888899999999999999999999984489999999999999999999998886 5999999973 33344
Q ss_pred CCccEEEEcchhhhcChhhHHHHHHHHHhccccCcEEEEEeecC
Q 035870 695 NKYDRIISCEMIEAVGHEFMEEFFGCCESLLAEDGLLVLQFISI 738 (842)
Q Consensus 695 ~~fD~i~s~~~~~~~~~~~~~~~~~~~~~~LkpgG~~~~~~~~~ 738 (842)
++||+|++..+++++.+ ++.++|||||++++.....
T Consensus 157 ~~fD~Ii~~~~~~~~~~--------~~~~~L~pgG~lvi~~~~~ 192 (235)
T 1jg1_A 157 APYDVIIVTAGAPKIPE--------PLIEQLKIGGKLIIPVGSY 192 (235)
T ss_dssp CCEEEEEECSBBSSCCH--------HHHHTEEEEEEEEEEECSS
T ss_pred CCccEEEECCcHHHHHH--------HHHHhcCCCcEEEEEEecC
Confidence 56999999999988864 5789999999999976544
No 200
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.44 E-value=4.5e-13 Score=138.33 Aligned_cols=111 Identities=22% Similarity=0.282 Sum_probs=97.7
Q ss_pred HHHHHHHcCCCCCCeEEEeccCchHHHHHHHHh--cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCccCC
Q 035870 618 VSLLIEKARVSKGQEVLEIGCGWGTLAIEIVKR--TGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLAKAN 695 (842)
Q Consensus 618 ~~~l~~~l~~~~~~~vLDiGcG~G~~~~~la~~--~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~~ 695 (842)
...++..+.++++.+|||+|||+|.++..+++. ++.+|+++|+|+++++.|+++++..+++++++++++|+.+..+++
T Consensus 82 ~~~i~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~ 161 (255)
T 3mb5_A 82 AALIVAYAGISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEGIEEE 161 (255)
T ss_dssp HHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGCCCCC
T ss_pred HHHHHHhhCCCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhccCCC
Confidence 346778888999999999999999999999988 378999999999999999999999999877999999998766667
Q ss_pred CccEEEEcchhhhcChhhHHHHHHHHHhccccCcEEEEEe
Q 035870 696 KYDRIISCEMIEAVGHEFMEEFFGCCESLLAEDGLLVLQF 735 (842)
Q Consensus 696 ~fD~i~s~~~~~~~~~~~~~~~~~~~~~~LkpgG~~~~~~ 735 (842)
+||+|++. .++ ...+++++.++|||||++++..
T Consensus 162 ~~D~v~~~-----~~~--~~~~l~~~~~~L~~gG~l~~~~ 194 (255)
T 3mb5_A 162 NVDHVILD-----LPQ--PERVVEHAAKALKPGGFFVAYT 194 (255)
T ss_dssp SEEEEEEC-----SSC--GGGGHHHHHHHEEEEEEEEEEE
T ss_pred CcCEEEEC-----CCC--HHHHHHHHHHHcCCCCEEEEEE
Confidence 89999984 333 4678999999999999999854
No 201
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.44 E-value=2.2e-13 Score=131.28 Aligned_cols=105 Identities=18% Similarity=0.234 Sum_probs=88.0
Q ss_pred CCCCeEEEeccCchHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCc---c--CCCccEEEE
Q 035870 628 SKGQEVLEIGCGWGTLAIEIVKRTGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLA---K--ANKYDRIIS 702 (842)
Q Consensus 628 ~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~---~--~~~fD~i~s 702 (842)
+++.+|||+|||+|.++..+++. +.+|+|+|+|+++++.|++++...++ +++++++|+.+.. + .++||+|++
T Consensus 40 ~~~~~vLD~GcG~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~~~~~~~~~D~i~~ 116 (171)
T 1ws6_A 40 PRRGRFLDPFAGSGAVGLEAASE-GWEAVLVEKDPEAVRLLKENVRRTGL--GARVVALPVEVFLPEAKAQGERFTVAFM 116 (171)
T ss_dssp TTCCEEEEETCSSCHHHHHHHHT-TCEEEEECCCHHHHHHHHHHHHHHTC--CCEEECSCHHHHHHHHHHTTCCEEEEEE
T ss_pred cCCCeEEEeCCCcCHHHHHHHHC-CCeEEEEeCCHHHHHHHHHHHHHcCC--ceEEEeccHHHHHHhhhccCCceEEEEE
Confidence 37889999999999999999998 67799999999999999999998887 7999999987742 1 348999999
Q ss_pred cchhhhcChhhHHHHHHHHH--hccccCcEEEEEeecCC
Q 035870 703 CEMIEAVGHEFMEEFFGCCE--SLLAEDGLLVLQFISIP 739 (842)
Q Consensus 703 ~~~~~~~~~~~~~~~~~~~~--~~LkpgG~~~~~~~~~~ 739 (842)
+.+++ .. .+..++.+. ++|||||.+++......
T Consensus 117 ~~~~~--~~--~~~~~~~~~~~~~L~~gG~~~~~~~~~~ 151 (171)
T 1ws6_A 117 APPYA--MD--LAALFGELLASGLVEAGGLYVLQHPKDL 151 (171)
T ss_dssp CCCTT--SC--TTHHHHHHHHHTCEEEEEEEEEEEETTS
T ss_pred CCCCc--hh--HHHHHHHHHhhcccCCCcEEEEEeCCcc
Confidence 98765 22 456666666 99999999999776544
No 202
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.44 E-value=3.2e-13 Score=144.36 Aligned_cols=113 Identities=26% Similarity=0.324 Sum_probs=95.6
Q ss_pred HHHHHcCCCCCCeEEEeccCchHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCc-cCCCcc
Q 035870 620 LLIEKARVSKGQEVLEIGCGWGTLAIEIVKRTGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLA-KANKYD 698 (842)
Q Consensus 620 ~l~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~-~~~~fD 698 (842)
.+.+.+...++.+|||||||+|.++..+++....+|+|+|+| .+++.|+++++.+++.++++++++|+.+++ ++++||
T Consensus 29 ai~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~v~~vD~s-~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D 107 (328)
T 1g6q_1 29 AIIQNKDLFKDKIVLDVGCGTGILSMFAAKHGAKHVIGVDMS-SIIEMAKELVELNGFSDKITLLRGKLEDVHLPFPKVD 107 (328)
T ss_dssp HHHHHHHHHTTCEEEEETCTTSHHHHHHHHTCCSEEEEEESS-THHHHHHHHHHHTTCTTTEEEEESCTTTSCCSSSCEE
T ss_pred HHHhhHhhcCCCEEEEecCccHHHHHHHHHCCCCEEEEEChH-HHHHHHHHHHHHcCCCCCEEEEECchhhccCCCCccc
Confidence 344444556788999999999999999998844599999999 699999999999999889999999999987 557999
Q ss_pred EEEEcchhhhcC-hhhHHHHHHHHHhccccCcEEEE
Q 035870 699 RIISCEMIEAVG-HEFMEEFFGCCESLLAEDGLLVL 733 (842)
Q Consensus 699 ~i~s~~~~~~~~-~~~~~~~~~~~~~~LkpgG~~~~ 733 (842)
+|++..+.+++. ...+..++.++.++|||||+++.
T Consensus 108 ~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li~ 143 (328)
T 1g6q_1 108 IIISEWMGYFLLYESMMDTVLYARDHYLVEGGLIFP 143 (328)
T ss_dssp EEEECCCBTTBSTTCCHHHHHHHHHHHEEEEEEEES
T ss_pred EEEEeCchhhcccHHHHHHHHHHHHhhcCCCeEEEE
Confidence 999987655543 23478899999999999999984
No 203
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.43 E-value=5.2e-13 Score=136.90 Aligned_cols=108 Identities=13% Similarity=0.116 Sum_probs=92.6
Q ss_pred CCCCCeEEEeccCchHHHHHHHHh-c-CCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCC-c---cCCCccEE
Q 035870 627 VSKGQEVLEIGCGWGTLAIEIVKR-T-GCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQL-A---KANKYDRI 700 (842)
Q Consensus 627 ~~~~~~vLDiGcG~G~~~~~la~~-~-~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~-~---~~~~fD~i 700 (842)
..++.+|||||||+|..+..+++. + +.+|+++|+|+++++.|+++++..++.++|+++++|+.+. + ..++||+|
T Consensus 61 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~~~~~fD~V 140 (248)
T 3tfw_A 61 LTQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLGECPAFDLI 140 (248)
T ss_dssp HHTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCCSCCCCSEE
T ss_pred hcCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcCCCCCeEEE
Confidence 456789999999999999999987 3 6899999999999999999999999988999999998763 2 23589999
Q ss_pred EEcchhhhcChhhHHHHHHHHHhccccCcEEEEEeecCC
Q 035870 701 ISCEMIEAVGHEFMEEFFGCCESLLAEDGLLVLQFISIP 739 (842)
Q Consensus 701 ~s~~~~~~~~~~~~~~~~~~~~~~LkpgG~~~~~~~~~~ 739 (842)
++... ......+++++.++|||||++++.++...
T Consensus 141 ~~d~~-----~~~~~~~l~~~~~~LkpGG~lv~~~~~~~ 174 (248)
T 3tfw_A 141 FIDAD-----KPNNPHYLRWALRYSRPGTLIIGDNVVRD 174 (248)
T ss_dssp EECSC-----GGGHHHHHHHHHHTCCTTCEEEEECCSGG
T ss_pred EECCc-----hHHHHHHHHHHHHhcCCCeEEEEeCCCcC
Confidence 98653 33468899999999999999999776543
No 204
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.43 E-value=3.7e-13 Score=136.89 Aligned_cols=112 Identities=22% Similarity=0.304 Sum_probs=95.8
Q ss_pred HHHHcCCCCCCeEEEeccCchHHHHHHHHh-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCC-c-c--CC
Q 035870 621 LIEKARVSKGQEVLEIGCGWGTLAIEIVKR-TGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQL-A-K--AN 695 (842)
Q Consensus 621 l~~~l~~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~-~-~--~~ 695 (842)
+...+...++.+|||||||+|..+..+++. ++.+|+++|+|+++++.|+++++..++.++++++++|+.+. + . ++
T Consensus 46 l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~ 125 (233)
T 2gpy_A 46 LLHLLKMAAPARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEKLELYP 125 (233)
T ss_dssp HHHHHHHHCCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHHHTTSC
T ss_pred HHHHHhccCCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhcccCC
Confidence 333444457889999999999999999988 47899999999999999999999999877899999999885 3 2 57
Q ss_pred CccEEEEcchhhhcChhhHHHHHHHHHhccccCcEEEEEeec
Q 035870 696 KYDRIISCEMIEAVGHEFMEEFFGCCESLLAEDGLLVLQFIS 737 (842)
Q Consensus 696 ~fD~i~s~~~~~~~~~~~~~~~~~~~~~~LkpgG~~~~~~~~ 737 (842)
+||+|++....+ .+..+++++.++|||||++++.++.
T Consensus 126 ~fD~I~~~~~~~-----~~~~~l~~~~~~L~pgG~lv~~~~~ 162 (233)
T 2gpy_A 126 LFDVLFIDAAKG-----QYRRFFDMYSPMVRPGGLILSDNVL 162 (233)
T ss_dssp CEEEEEEEGGGS-----CHHHHHHHHGGGEEEEEEEEEETTT
T ss_pred CccEEEECCCHH-----HHHHHHHHHHHHcCCCeEEEEEcCC
Confidence 899999977643 3789999999999999999997654
No 205
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.43 E-value=3e-13 Score=136.60 Aligned_cols=108 Identities=16% Similarity=0.161 Sum_probs=92.3
Q ss_pred CCCCCeEEEeccCchHHHHHHHHh-c-CCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCcc------CCCcc
Q 035870 627 VSKGQEVLEIGCGWGTLAIEIVKR-T-GCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLAK------ANKYD 698 (842)
Q Consensus 627 ~~~~~~vLDiGcG~G~~~~~la~~-~-~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~------~~~fD 698 (842)
..++.+|||||||+|..+..+++. + +++|+++|+|+++++.|++++...++.++++++++|+.+..+ .++||
T Consensus 56 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD 135 (223)
T 3duw_A 56 IQGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQIENEKYEPFD 135 (223)
T ss_dssp HHTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCCCCS
T ss_pred hhCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCcC
Confidence 356789999999999999999988 3 689999999999999999999999998889999999876431 26799
Q ss_pred EEEEcchhhhcChhhHHHHHHHHHhccccCcEEEEEeecCC
Q 035870 699 RIISCEMIEAVGHEFMEEFFGCCESLLAEDGLLVLQFISIP 739 (842)
Q Consensus 699 ~i~s~~~~~~~~~~~~~~~~~~~~~~LkpgG~~~~~~~~~~ 739 (842)
+|++.... .....+++++.++|||||.+++.++...
T Consensus 136 ~v~~d~~~-----~~~~~~l~~~~~~L~pgG~lv~~~~~~~ 171 (223)
T 3duw_A 136 FIFIDADK-----QNNPAYFEWALKLSRPGTVIIGDNVVRE 171 (223)
T ss_dssp EEEECSCG-----GGHHHHHHHHHHTCCTTCEEEEESCSGG
T ss_pred EEEEcCCc-----HHHHHHHHHHHHhcCCCcEEEEeCCCcC
Confidence 99987652 2368999999999999999998766543
No 206
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.43 E-value=6.3e-13 Score=132.29 Aligned_cols=104 Identities=19% Similarity=0.169 Sum_probs=83.7
Q ss_pred cCCCCCCeEEEeccCchHHHHHHHHhc-CCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCC----ccCCCccE
Q 035870 625 ARVSKGQEVLEIGCGWGTLAIEIVKRT-GCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQL----AKANKYDR 699 (842)
Q Consensus 625 l~~~~~~~vLDiGcG~G~~~~~la~~~-~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~----~~~~~fD~ 699 (842)
+.++++.+|||+|||+|.++..+++.. +.+|+|+|+|+.+++.+.++++.. .++.++++|+.+. +..++||+
T Consensus 53 ~~~~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~~---~~v~~~~~d~~~~~~~~~~~~~fD~ 129 (210)
T 1nt2_A 53 LKLRGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRER---NNIIPLLFDASKPWKYSGIVEKVDL 129 (210)
T ss_dssp CCCCSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHC---SSEEEECSCTTCGGGTTTTCCCEEE
T ss_pred cCCCCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhcC---CCeEEEEcCCCCchhhcccccceeE
Confidence 567889999999999999999999873 469999999999988777766654 3789999998774 33378999
Q ss_pred EEEcchhhhcChhhHHHHHHHHHhccccCcEEEEEe
Q 035870 700 IISCEMIEAVGHEFMEEFFGCCESLLAEDGLLVLQF 735 (842)
Q Consensus 700 i~s~~~~~~~~~~~~~~~~~~~~~~LkpgG~~~~~~ 735 (842)
|+++. .. .+....++++++++|||||++++..
T Consensus 130 V~~~~-~~---~~~~~~~l~~~~r~LkpgG~l~i~~ 161 (210)
T 1nt2_A 130 IYQDI-AQ---KNQIEILKANAEFFLKEKGEVVIMV 161 (210)
T ss_dssp EEECC-CS---TTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEec-cC---hhHHHHHHHHHHHHhCCCCEEEEEE
Confidence 99973 11 1234566999999999999999963
No 207
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.43 E-value=2.3e-13 Score=140.55 Aligned_cols=115 Identities=16% Similarity=0.245 Sum_probs=94.9
Q ss_pred HHHHcCCCCCCeEEEeccCchHHHHHHHHh-cCCEEEEEcCCHHHHHHHHHHHHH---cCCCCCeEEEEccccCCc----
Q 035870 621 LIEKARVSKGQEVLEIGCGWGTLAIEIVKR-TGCKYTGITLSEEQLKYAEMKVKE---AGLQDLIRLYLCDYRQLA---- 692 (842)
Q Consensus 621 l~~~l~~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gid~s~~~~~~a~~~~~~---~~l~~~v~~~~~d~~~~~---- 692 (842)
+...+...++.+|||+|||+|.++..++++ ++.+|+|+|+|+++++.|++++.. +++.++++++++|+.+..
T Consensus 28 L~~~~~~~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~ 107 (260)
T 2ozv_A 28 LASLVADDRACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARV 107 (260)
T ss_dssp HHHTCCCCSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHH
T ss_pred HHHHhcccCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhh
Confidence 344556678889999999999999999998 467999999999999999999988 888778999999998872
Q ss_pred ----cCCCccEEEEcchhhhc----------------ChhhHHHHHHHHHhccccCcEEEEEe
Q 035870 693 ----KANKYDRIISCEMIEAV----------------GHEFMEEFFGCCESLLAEDGLLVLQF 735 (842)
Q Consensus 693 ----~~~~fD~i~s~~~~~~~----------------~~~~~~~~~~~~~~~LkpgG~~~~~~ 735 (842)
++++||+|+++..+... ....+..+++.+.++|||||++++..
T Consensus 108 ~~~~~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 170 (260)
T 2ozv_A 108 EAGLPDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLIS 170 (260)
T ss_dssp HTTCCTTCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hhccCCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEE
Confidence 35789999998554332 22347889999999999999999843
No 208
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.43 E-value=3.5e-13 Score=134.38 Aligned_cols=99 Identities=16% Similarity=0.302 Sum_probs=88.5
Q ss_pred CCCeEEEeccCchHHHHHHHHh-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCccCCCccEEEEcchhh
Q 035870 629 KGQEVLEIGCGWGTLAIEIVKR-TGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLAKANKYDRIISCEMIE 707 (842)
Q Consensus 629 ~~~~vLDiGcG~G~~~~~la~~-~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~~~fD~i~s~~~~~ 707 (842)
++.+|||+|||+|.++..+++. ++.+|+++|+|+.+++.|++++...+++ +++++++|+.+.++.++||+|+++..
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~~~~~D~i~~~~~-- 141 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLE-NIEPVQSRVEEFPSEPPFDGVISRAF-- 141 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCS-SEEEEECCTTTSCCCSCEEEEECSCS--
T ss_pred CCCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCC-CeEEEecchhhCCccCCcCEEEEecc--
Confidence 4789999999999999999987 5789999999999999999999998886 49999999988875679999998642
Q ss_pred hcChhhHHHHHHHHHhccccCcEEEEE
Q 035870 708 AVGHEFMEEFFGCCESLLAEDGLLVLQ 734 (842)
Q Consensus 708 ~~~~~~~~~~~~~~~~~LkpgG~~~~~ 734 (842)
. .+..+++++.++|||||.+++.
T Consensus 142 --~--~~~~~l~~~~~~L~~gG~l~~~ 164 (207)
T 1jsx_A 142 --A--SLNDMVSWCHHLPGEQGRFYAL 164 (207)
T ss_dssp --S--SHHHHHHHHTTSEEEEEEEEEE
T ss_pred --C--CHHHHHHHHHHhcCCCcEEEEE
Confidence 2 3789999999999999999986
No 209
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.42 E-value=1.2e-12 Score=135.55 Aligned_cols=109 Identities=19% Similarity=0.216 Sum_probs=95.3
Q ss_pred HHHHHHcCCCCCCeEEEeccCchHHHHHHHHh--cCCEEEEEcCCHHHHHHHHHHHHHc-CCCCCeEEEEccccCCc-cC
Q 035870 619 SLLIEKARVSKGQEVLEIGCGWGTLAIEIVKR--TGCKYTGITLSEEQLKYAEMKVKEA-GLQDLIRLYLCDYRQLA-KA 694 (842)
Q Consensus 619 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~la~~--~~~~v~gid~s~~~~~~a~~~~~~~-~l~~~v~~~~~d~~~~~-~~ 694 (842)
..+++.+.+.++.+|||+|||+|.++..+++. ++.+|+++|+|+++++.|+++++.. | .+++++.++|+.+.+ ++
T Consensus 86 ~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g-~~~v~~~~~d~~~~~~~~ 164 (258)
T 2pwy_A 86 SAMVTLLDLAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQ-VENVRFHLGKLEEAELEE 164 (258)
T ss_dssp HHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCC-CCCEEEEESCGGGCCCCT
T ss_pred HHHHHHcCCCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcC-CCCEEEEECchhhcCCCC
Confidence 46778888899999999999999999999987 3689999999999999999999887 7 458999999998885 55
Q ss_pred CCccEEEEcchhhhcChhhHHHHHHHHHhccccCcEEEEEe
Q 035870 695 NKYDRIISCEMIEAVGHEFMEEFFGCCESLLAEDGLLVLQF 735 (842)
Q Consensus 695 ~~fD~i~s~~~~~~~~~~~~~~~~~~~~~~LkpgG~~~~~~ 735 (842)
++||+|++. .++ ...+++++.++|||||++++..
T Consensus 165 ~~~D~v~~~-----~~~--~~~~l~~~~~~L~~gG~l~~~~ 198 (258)
T 2pwy_A 165 AAYDGVALD-----LME--PWKVLEKAALALKPDRFLVAYL 198 (258)
T ss_dssp TCEEEEEEE-----SSC--GGGGHHHHHHHEEEEEEEEEEE
T ss_pred CCcCEEEEC-----CcC--HHHHHHHHHHhCCCCCEEEEEe
Confidence 789999983 333 4688999999999999999965
No 210
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=99.42 E-value=1.7e-12 Score=144.01 Aligned_cols=186 Identities=13% Similarity=0.175 Sum_probs=103.3
Q ss_pred hHHHHHHHHHhhhcCceEEeCCCeeEEEeCCCc-EEEEeCCCcEEeCCEEEEccChHH--HHHhhcCCCChHHHHhcccc
Q 035870 215 HSYVNKVRKQLESWGCQIRTSSEVCSVLPADKG-CTIVCGDGSREFYNSCVMALHAPD--ALKILGNQATFDETRILGAF 291 (842)
Q Consensus 215 ~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~-v~V~~~~G~~~~ad~VV~A~p~~~--~~~ll~~~~~~~~~~~l~~~ 291 (842)
..+++.|.+.+++.|++|+++++|++|..++++ +.|++.+| ++.||.||+|+..+. +.+.+... +
T Consensus 174 ~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~g-~~~a~~vV~a~G~~s~~l~~~~g~~-----------~ 241 (405)
T 2gag_B 174 DHVAWAFARKANEMGVDIIQNCEVTGFIKDGEKVTGVKTTRG-TIHAGKVALAGAGHSSVLAEMAGFE-----------L 241 (405)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEETTC-CEEEEEEEECCGGGHHHHHHHHTCC-----------C
T ss_pred HHHHHHHHHHHHHCCCEEEcCCeEEEEEEeCCEEEEEEeCCc-eEECCEEEECCchhHHHHHHHcCCC-----------C
Confidence 478999999999999999999999999998776 57888888 799999999998754 22322211 1
Q ss_pred ceeec---eEEEecCCCCcCCCCCCcc--eeeecc-cCCCceEEEEEcccccCCCCC--------CCCeEEecCCCCCCc
Q 035870 292 QYVYS---DIFLHRDKRFMPQNPAAWS--AWNFLE-SFDSKVCLTYWLNVLQNLGET--------SLPFLVTLNPDHVPE 357 (842)
Q Consensus 292 ~~~~~---~v~l~~~~~~~p~~~~~~~--~~~~~~-~~~~~~~v~~~~~~l~~l~~~--------~~~~~~~l~~~~~~~ 357 (842)
+..+. .++..-....++ ...+. ...|.. .+++...+............. +.+.+..+.|.....
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~y~~p~~~g~~~ig~~~~~~~~~~~~~~~~~~~~l~~~~~~~~p~l~~~ 319 (405)
T 2gag_B 242 PIQSHPLQALVSELFEPVHP--TVVMSNHIHVYVSQAHKGELVMGAGIDSYNGYGQRGAFHVIQEQMAAAVELFPIFARA 319 (405)
T ss_dssp CEEEEEEEEEEEEEBCSCCC--SEEEETTTTEEEEECTTSEEEEEEEECSSCCCSSCCCTHHHHHHHHHHHHHCGGGGGC
T ss_pred CccccceeEEEecCCccccC--ceEEeCCCcEEEEEcCCCcEEEEeccCCCCccccCCCHHHHHHHHHHHHHhCCccccC
Confidence 11111 111110011010 00000 011111 134444444332211111000 011112223332222
Q ss_pred ceeEEEEcCCCCCCHHHHHHHHhhhhhcCCCCeEEeccccCCCCCchhHhHHHHHHHHhcCCc
Q 035870 358 HTLLKWSTGHPVPSVAASKASLELDHIQGKRGIWFCGAYQGYGFHEDGLKAGMTAAHGVLGKS 420 (842)
Q Consensus 358 ~~~~~w~~~~p~~~~~~~~~~~~~~~~~~~~~l~~aG~~~g~G~~e~A~~SG~~aA~~Il~~~ 420 (842)
.+...|...+|. +.+..+.+.... .+|+|++.++.|.|+ ..|...|+.+|+.|++..
T Consensus 320 ~~~~~w~g~~~~----t~d~~p~ig~~~-~~~l~~~~G~~g~G~-~~a~~~g~~la~~i~g~~ 376 (405)
T 2gag_B 320 HVLRTWGGIVDT----TMDASPIISKTP-IQNLYVNCGWGTGGF-KGTPGAGFTLAHTIANDE 376 (405)
T ss_dssp EECEEEEEEEEE----ETTSCCEEEECS-SBTEEEEECCGGGCS-TTHHHHHHHHHHHHHHTS
T ss_pred CcceEEeecccc----CCCCCCEecccC-CCCEEEEecCCCchh-hHHHHHHHHHHHHHhCCC
Confidence 345566554332 111122222222 579999999999999 899999999999999765
No 211
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.42 E-value=5.6e-13 Score=144.46 Aligned_cols=149 Identities=10% Similarity=0.061 Sum_probs=113.3
Q ss_pred CCCCCCeEEEeccCchHHHHHHHHh-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCccCCCccEEEEcc
Q 035870 626 RVSKGQEVLEIGCGWGTLAIEIVKR-TGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLAKANKYDRIISCE 704 (842)
Q Consensus 626 ~~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~~~fD~i~s~~ 704 (842)
.++++.+|||||||+|.++..+++. ++.+++++|+ +.+++.|++. .+++++.+|+.+..+ .||+|++..
T Consensus 185 ~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-------~~v~~~~~d~~~~~p--~~D~v~~~~ 254 (352)
T 1fp2_A 185 VFDGLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVVENLSGS-------NNLTYVGGDMFTSIP--NADAVLLKY 254 (352)
T ss_dssp HHTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCB-------TTEEEEECCTTTCCC--CCSEEEEES
T ss_pred ccccCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHHhhcccC-------CCcEEEeccccCCCC--CccEEEeeh
Confidence 3457789999999999999999988 6789999999 9999888752 269999999866223 399999999
Q ss_pred hhhhcChhhHHHHHHHHHhcccc---CcEEEEEeecCCCcccc----cccCccchhhhcccCCCCCCCHHHHHHHHhhcC
Q 035870 705 MIEAVGHEFMEEFFGCCESLLAE---DGLLVLQFISIPDERYN----EYRLSSDFIKEYIFPGGCLPSLSRITSAMSVAS 777 (842)
Q Consensus 705 ~~~~~~~~~~~~~~~~~~~~Lkp---gG~~~~~~~~~~~~~~~----~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~ 777 (842)
++||++++....++++++++||| ||++++.+...++.... ......++.. ..+. +...+..++.+.+.+ +
T Consensus 255 ~lh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~-~~~~-g~~~t~~e~~~ll~~-a 331 (352)
T 1fp2_A 255 ILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDMVIDKKKDENQVTQIKLLMDVNM-ACLN-GKERNEEEWKKLFIE-A 331 (352)
T ss_dssp CGGGSCHHHHHHHHHHHHHHHSGGGCCCEEEEEECEECTTTSCHHHHHHHHHHHHHG-GGGT-CCCEEHHHHHHHHHH-T
T ss_pred hhccCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeecCCCCCccchhhhHhhccHHH-Hhcc-CCCCCHHHHHHHHHH-C
Confidence 99999986667999999999999 99999988776543211 0000011111 1122 556688999888887 8
Q ss_pred CcEEEEEEec
Q 035870 778 RLCVEQVENI 787 (842)
Q Consensus 778 gf~v~~~~~~ 787 (842)
||++.++...
T Consensus 332 Gf~~~~~~~~ 341 (352)
T 1fp2_A 332 GFQHYKISPL 341 (352)
T ss_dssp TCCEEEEEEE
T ss_pred CCCeeEEEec
Confidence 9998877653
No 212
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.42 E-value=5.9e-13 Score=135.37 Aligned_cols=107 Identities=15% Similarity=0.115 Sum_probs=88.5
Q ss_pred HHHcCCCCCCeEEEeccCchHHHHHHHHhc--CCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCC---c-cCC
Q 035870 622 IEKARVSKGQEVLEIGCGWGTLAIEIVKRT--GCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQL---A-KAN 695 (842)
Q Consensus 622 ~~~l~~~~~~~vLDiGcG~G~~~~~la~~~--~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~---~-~~~ 695 (842)
++.+.++++.+|||+|||+|.++..+++.. +.+|+|+|+|+.+++.+.++++.. .+++++++|+.+. + .++
T Consensus 70 l~~~~~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~---~~v~~~~~d~~~~~~~~~~~~ 146 (233)
T 2ipx_A 70 VDQIHIKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKR---TNIIPVIEDARHPHKYRMLIA 146 (233)
T ss_dssp CSCCCCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHC---TTEEEECSCTTCGGGGGGGCC
T ss_pred HheecCCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhcc---CCeEEEEcccCChhhhcccCC
Confidence 345667889999999999999999999983 479999999999999888888775 3899999999873 3 457
Q ss_pred CccEEEEcchhhhcChhhHHHHHHHHHhccccCcEEEEEe
Q 035870 696 KYDRIISCEMIEAVGHEFMEEFFGCCESLLAEDGLLVLQF 735 (842)
Q Consensus 696 ~fD~i~s~~~~~~~~~~~~~~~~~~~~~~LkpgG~~~~~~ 735 (842)
+||+|++... ..+....++.++.++|||||++++..
T Consensus 147 ~~D~V~~~~~----~~~~~~~~~~~~~~~LkpgG~l~i~~ 182 (233)
T 2ipx_A 147 MVDVIFADVA----QPDQTRIVALNAHTFLRNGGHFVISI 182 (233)
T ss_dssp CEEEEEECCC----CTTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cEEEEEEcCC----CccHHHHHHHHHHHHcCCCeEEEEEE
Confidence 8999999655 22234667889999999999999953
No 213
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.41 E-value=3.9e-13 Score=135.93 Aligned_cols=107 Identities=21% Similarity=0.207 Sum_probs=92.0
Q ss_pred CCCCeEEEeccCchHHHHHHHHh-c-CCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCc---cC----CCcc
Q 035870 628 SKGQEVLEIGCGWGTLAIEIVKR-T-GCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLA---KA----NKYD 698 (842)
Q Consensus 628 ~~~~~vLDiGcG~G~~~~~la~~-~-~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~---~~----~~fD 698 (842)
.++.+|||||||+|..+..+++. + +.+|+++|+|+++++.|+++++..++.++++++++|+.+.. .. ++||
T Consensus 63 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD 142 (225)
T 3tr6_A 63 MQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHAGQAWQYD 142 (225)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHTTTCTTCEE
T ss_pred hCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhhccCCCCcc
Confidence 46789999999999999999987 3 68999999999999999999999999888999999986643 11 7899
Q ss_pred EEEEcchhhhcChhhHHHHHHHHHhccccCcEEEEEeecCC
Q 035870 699 RIISCEMIEAVGHEFMEEFFGCCESLLAEDGLLVLQFISIP 739 (842)
Q Consensus 699 ~i~s~~~~~~~~~~~~~~~~~~~~~~LkpgG~~~~~~~~~~ 739 (842)
+|++... ...+..+++++.++|||||++++.++..+
T Consensus 143 ~v~~~~~-----~~~~~~~l~~~~~~L~pgG~lv~~~~~~~ 178 (225)
T 3tr6_A 143 LIYIDAD-----KANTDLYYEESLKLLREGGLIAVDNVLRR 178 (225)
T ss_dssp EEEECSC-----GGGHHHHHHHHHHHEEEEEEEEEECSSGG
T ss_pred EEEECCC-----HHHHHHHHHHHHHhcCCCcEEEEeCCCcC
Confidence 9997653 23478899999999999999999776544
No 214
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.41 E-value=9.4e-13 Score=135.14 Aligned_cols=106 Identities=18% Similarity=0.231 Sum_probs=92.3
Q ss_pred CCCCCeEEEeccCchHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCccCCCccEEEEcchh
Q 035870 627 VSKGQEVLEIGCGWGTLAIEIVKRTGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLAKANKYDRIISCEMI 706 (842)
Q Consensus 627 ~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~~~fD~i~s~~~~ 706 (842)
+++|++|||+|||+|.+++.+|+...++|+++|+|+.+++.++++++.+++.++++++++|.++++..+.||.|+++...
T Consensus 123 ~~~g~~VlD~~aG~G~~~i~~a~~g~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~~~~~~D~Vi~~~p~ 202 (278)
T 3k6r_A 123 AKPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPGENIADRILMGYVV 202 (278)
T ss_dssp CCTTCEEEETTCTTTTTTHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCCCSCEEEEEECCCS
T ss_pred cCCCCEEEEecCcCcHHHHHHHHhcCCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhccccCCCEEEECCCC
Confidence 46899999999999999999999855799999999999999999999999999999999999999877899999987542
Q ss_pred hhcChhhHHHHHHHHHhccccCcEEEEEeecC
Q 035870 707 EAVGHEFMEEFFGCCESLLAEDGLLVLQFISI 738 (842)
Q Consensus 707 ~~~~~~~~~~~~~~~~~~LkpgG~~~~~~~~~ 738 (842)
. ...++..+.++|||||.+.++.+..
T Consensus 203 ~------~~~~l~~a~~~lk~gG~ih~~~~~~ 228 (278)
T 3k6r_A 203 R------THEFIPKALSIAKDGAIIHYHNTVP 228 (278)
T ss_dssp S------GGGGHHHHHHHEEEEEEEEEEEEEE
T ss_pred c------HHHHHHHHHHHcCCCCEEEEEeeec
Confidence 2 2356667778999999998876653
No 215
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.41 E-value=2.2e-12 Score=134.74 Aligned_cols=146 Identities=12% Similarity=0.177 Sum_probs=104.2
Q ss_pred HHHHHHHcCCCCCCeEEEeccCchHHHHHHHHhcCC-EEEEEcC-CHHHHHHHHHHH-----HHcCCC----CCeEEEEc
Q 035870 618 VSLLIEKARVSKGQEVLEIGCGWGTLAIEIVKRTGC-KYTGITL-SEEQLKYAEMKV-----KEAGLQ----DLIRLYLC 686 (842)
Q Consensus 618 ~~~l~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~-~v~gid~-s~~~~~~a~~~~-----~~~~l~----~~v~~~~~ 686 (842)
.+.+.+.....++.+|||||||+|.+++.+++. +. +|+++|+ |+++++.|++++ +.+++. ++++++..
T Consensus 68 ~~~l~~~~~~~~~~~vLDlG~G~G~~~~~~a~~-~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~ 146 (281)
T 3bzb_A 68 ADTLCWQPELIAGKTVCELGAGAGLVSIVAFLA-GADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPY 146 (281)
T ss_dssp HHHHHHCGGGTTTCEEEETTCTTSHHHHHHHHT-TCSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEEC
T ss_pred HHHHHhcchhcCCCeEEEecccccHHHHHHHHc-CCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEe
Confidence 344555455567889999999999999999987 55 9999999 899999999999 555654 47888877
Q ss_pred cccCCc-------cCCCccEEEEcchhhhcChhhHHHHHHHHHhccc---c--CcEEEEEeecCCCcccccccCccchhh
Q 035870 687 DYRQLA-------KANKYDRIISCEMIEAVGHEFMEEFFGCCESLLA---E--DGLLVLQFISIPDERYNEYRLSSDFIK 754 (842)
Q Consensus 687 d~~~~~-------~~~~fD~i~s~~~~~~~~~~~~~~~~~~~~~~Lk---p--gG~~~~~~~~~~~~~~~~~~~~~~~~~ 754 (842)
|..+.. .+++||+|++..+++|.++ ...+++.+.++|| | ||++++........ +
T Consensus 147 ~~~~~~~~~~~~~~~~~fD~Ii~~dvl~~~~~--~~~ll~~l~~~Lk~~~p~~gG~l~v~~~~~~~~-----------~- 212 (281)
T 3bzb_A 147 RWGDSPDSLQRCTGLQRFQVVLLADLLSFHQA--HDALLRSVKMLLALPANDPTAVALVTFTHHRPH-----------L- 212 (281)
T ss_dssp CTTSCTHHHHHHHSCSSBSEEEEESCCSCGGG--HHHHHHHHHHHBCCTTTCTTCEEEEEECC-----------------
T ss_pred cCCCccHHHHhhccCCCCCEEEEeCcccChHH--HHHHHHHHHHHhcccCCCCCCEEEEEEEeeecc-----------c-
Confidence 755431 2478999999999998755 8999999999999 9 99987742221100 0
Q ss_pred hcccCCCCCCCHHHHHHHHhhcCC-cEEEEEEec
Q 035870 755 EYIFPGGCLPSLSRITSAMSVASR-LCVEQVENI 787 (842)
Q Consensus 755 ~~i~p~~~~~~~~~~~~~~~~~~g-f~v~~~~~~ 787 (842)
.....++.+.+.+ .| |+++.+...
T Consensus 213 --------~~~~~~~~~~l~~-~G~f~v~~~~~~ 237 (281)
T 3bzb_A 213 --------AERDLAFFRLVNA-DGALIAEPWLSP 237 (281)
T ss_dssp -----------CTHHHHHHHH-STTEEEEEEECC
T ss_pred --------chhHHHHHHHHHh-cCCEEEEEeccc
Confidence 0112345555565 79 999887653
No 216
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.41 E-value=6.1e-13 Score=143.34 Aligned_cols=116 Identities=16% Similarity=0.257 Sum_probs=97.9
Q ss_pred HHHHHHcCCCCCCeEEEeccCchHHHHHHHHh-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCccCCCc
Q 035870 619 SLLIEKARVSKGQEVLEIGCGWGTLAIEIVKR-TGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLAKANKY 697 (842)
Q Consensus 619 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~~~f 697 (842)
+.+++.+...++.+|||+|||+|.++..+++. +..+|+++|+|+.+++.|++++..+++. ++++.+|..+.. +++|
T Consensus 186 ~~ll~~l~~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~--~~~~~~d~~~~~-~~~f 262 (343)
T 2pjd_A 186 QLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVE--GEVFASNVFSEV-KGRF 262 (343)
T ss_dssp HHHHHHSCTTCCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHTTCC--CEEEECSTTTTC-CSCE
T ss_pred HHHHHhcCcCCCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCC--CEEEEccccccc-cCCe
Confidence 45667776667789999999999999999988 4579999999999999999999988874 678899987664 5789
Q ss_pred cEEEEcchhhhc---ChhhHHHHHHHHHhccccCcEEEEEeec
Q 035870 698 DRIISCEMIEAV---GHEFMEEFFGCCESLLAEDGLLVLQFIS 737 (842)
Q Consensus 698 D~i~s~~~~~~~---~~~~~~~~~~~~~~~LkpgG~~~~~~~~ 737 (842)
|+|+++.++++. ..+....+++++.++|||||.+++....
T Consensus 263 D~Iv~~~~~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 305 (343)
T 2pjd_A 263 DMIISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIVANA 305 (343)
T ss_dssp EEEEECCCCCSSSHHHHHHHHHHHHHHGGGEEEEEEEEEEEET
T ss_pred eEEEECCCcccCccCCHHHHHHHHHHHHHhCCCCcEEEEEEcC
Confidence 999999988762 3345789999999999999999996543
No 217
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.41 E-value=1.3e-12 Score=138.62 Aligned_cols=119 Identities=13% Similarity=0.153 Sum_probs=96.9
Q ss_pred HHHHHcCCCCCCeEEEeccCchHHHHHHHHhc--CCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCc-cCCC
Q 035870 620 LLIEKARVSKGQEVLEIGCGWGTLAIEIVKRT--GCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLA-KANK 696 (842)
Q Consensus 620 ~l~~~l~~~~~~~vLDiGcG~G~~~~~la~~~--~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~-~~~~ 696 (842)
.+...+.++++.+|||+|||+|..+..+++.. +.+|+++|+|+.+++.++++++..|+. +++++++|+.+++ .+++
T Consensus 109 l~~~~l~~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~-~v~~~~~D~~~~~~~~~~ 187 (315)
T 1ixk_A 109 YPPVALDPKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVL-NVILFHSSSLHIGELNVE 187 (315)
T ss_dssp HHHHHHCCCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCC-SEEEESSCGGGGGGGCCC
T ss_pred HHHHHhCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCC-eEEEEECChhhccccccc
Confidence 34456678899999999999999999999873 479999999999999999999999986 7999999998876 4578
Q ss_pred ccEEEEcc------hhhhcCh--------------hhHHHHHHHHHhccccCcEEEEEeecCC
Q 035870 697 YDRIISCE------MIEAVGH--------------EFMEEFFGCCESLLAEDGLLVLQFISIP 739 (842)
Q Consensus 697 fD~i~s~~------~~~~~~~--------------~~~~~~~~~~~~~LkpgG~~~~~~~~~~ 739 (842)
||+|++.. ++.+.++ +....+++++.++|||||++++.+++..
T Consensus 188 fD~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs~~ 250 (315)
T 1ixk_A 188 FDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCSLE 250 (315)
T ss_dssp EEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCC
T ss_pred CCEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCCCC
Confidence 99999853 2333221 1126889999999999999999877643
No 218
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=99.41 E-value=1.8e-12 Score=143.41 Aligned_cols=57 Identities=14% Similarity=0.215 Sum_probs=50.4
Q ss_pred hhHHHHHHHHHhhhcCceEEeCCCeeEEEeCCCcEEEEeCCCcEEeCCEEEEccChHH
Q 035870 214 SHSYVNKVRKQLESWGCQIRTSSEVCSVLPADKGCTIVCGDGSREFYNSCVMALHAPD 271 (842)
Q Consensus 214 ~~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VV~A~p~~~ 271 (842)
...+.+.|.+.+++.|++|+++++|++|..++++|.|++.+| ++.||.||+|+..+.
T Consensus 152 ~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~~v~v~t~~g-~i~a~~VV~A~G~~s 208 (397)
T 2oln_A 152 VRGTLAALFTLAQAAGATLRAGETVTELVPDADGVSVTTDRG-TYRAGKVVLACGPYT 208 (397)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESCCEEEEEEETTEEEEEESSC-EEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHHcCCEEECCCEEEEEEEcCCeEEEEECCC-EEEcCEEEEcCCcCh
Confidence 357888999999889999999999999999888899988777 799999999998763
No 219
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.40 E-value=6.1e-13 Score=134.73 Aligned_cols=108 Identities=15% Similarity=0.236 Sum_probs=84.7
Q ss_pred CCCCCeEEEeccCchHHHHHHHHh-cCCEEEEEcCCHHHHHHHHHHHHH------cCCCCCeEEEEccccC-Cc---cCC
Q 035870 627 VSKGQEVLEIGCGWGTLAIEIVKR-TGCKYTGITLSEEQLKYAEMKVKE------AGLQDLIRLYLCDYRQ-LA---KAN 695 (842)
Q Consensus 627 ~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gid~s~~~~~~a~~~~~~------~~l~~~v~~~~~d~~~-~~---~~~ 695 (842)
..++.+|||||||+|.++..+|+. ++.+|+|+|+|+.+++.|+++++. .++ .+++++++|+.+ ++ +++
T Consensus 44 ~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~-~nv~~~~~d~~~~l~~~~~~~ 122 (235)
T 3ckk_A 44 AQAQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGF-QNIACLRSNAMKHLPNFFYKG 122 (235)
T ss_dssp --CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCC-TTEEEEECCTTTCHHHHCCTT
T ss_pred cCCCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCC-CeEEEEECcHHHhhhhhCCCc
Confidence 456779999999999999999988 578999999999999999998764 344 489999999987 44 468
Q ss_pred CccEEEEcchhhhcChh------hHHHHHHHHHhccccCcEEEEEe
Q 035870 696 KYDRIISCEMIEAVGHE------FMEEFFGCCESLLAEDGLLVLQF 735 (842)
Q Consensus 696 ~fD~i~s~~~~~~~~~~------~~~~~~~~~~~~LkpgG~~~~~~ 735 (842)
+||.|+++..-.+.... ....+++++.++|||||.+++.+
T Consensus 123 ~~D~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~t 168 (235)
T 3ckk_A 123 QLTKMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTIT 168 (235)
T ss_dssp CEEEEEEESCC-----------CCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred CeeEEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEe
Confidence 99999986543332110 01579999999999999999864
No 220
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.40 E-value=1.1e-12 Score=139.59 Aligned_cols=110 Identities=18% Similarity=0.232 Sum_probs=91.0
Q ss_pred CCCCCeEEEeccCchHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHHcCCCC-CeEEEEccccCCcc-----CCCccEE
Q 035870 627 VSKGQEVLEIGCGWGTLAIEIVKRTGCKYTGITLSEEQLKYAEMKVKEAGLQD-LIRLYLCDYRQLAK-----ANKYDRI 700 (842)
Q Consensus 627 ~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~~l~~-~v~~~~~d~~~~~~-----~~~fD~i 700 (842)
..++.+|||+|||+|.+++.+++. +++|+++|+|+.+++.|+++++.+++.+ +++++++|+.++.. .++||+|
T Consensus 151 ~~~~~~VLDlgcGtG~~sl~la~~-ga~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~~~~~~~~fD~I 229 (332)
T 2igt_A 151 ADRPLKVLNLFGYTGVASLVAAAA-GAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREERRGSTYDII 229 (332)
T ss_dssp SSSCCEEEEETCTTCHHHHHHHHT-TCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHHHHTCCBSEE
T ss_pred cCCCCcEEEcccccCHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHHHHHhcCCCceEE
Confidence 356789999999999999999997 7799999999999999999999999875 59999999887641 5789999
Q ss_pred EEcchhhhcC--------hhhHHHHHHHHHhccccCcEEEEEeec
Q 035870 701 ISCEMIEAVG--------HEFMEEFFGCCESLLAEDGLLVLQFIS 737 (842)
Q Consensus 701 ~s~~~~~~~~--------~~~~~~~~~~~~~~LkpgG~~~~~~~~ 737 (842)
+++....... .+.+..+++++.++|||||.+++....
T Consensus 230 i~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~~ 274 (332)
T 2igt_A 230 LTDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTAY 274 (332)
T ss_dssp EECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEEC
T ss_pred EECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEECC
Confidence 9965422211 124788999999999999998775543
No 221
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.40 E-value=1.5e-13 Score=140.12 Aligned_cols=108 Identities=19% Similarity=0.178 Sum_probs=93.5
Q ss_pred CCCCeEEEeccCchHHHHHHHHh--cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCc-c------CCCcc
Q 035870 628 SKGQEVLEIGCGWGTLAIEIVKR--TGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLA-K------ANKYD 698 (842)
Q Consensus 628 ~~~~~vLDiGcG~G~~~~~la~~--~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~-~------~~~fD 698 (842)
.++.+|||||||+|..+..+|+. .+++|+++|+|+++++.|+++++..++.++|+++++|+.+.. . .++||
T Consensus 59 ~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~~~~~~~~~~fD 138 (242)
T 3r3h_A 59 TRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDTLHSLLNEGGEHQFD 138 (242)
T ss_dssp HTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHHHHHHHHHHCSSCEE
T ss_pred cCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHhhccCCCCEe
Confidence 45679999999999999999986 268999999999999999999999999889999999987654 1 48999
Q ss_pred EEEEcchhhhcChhhHHHHHHHHHhccccCcEEEEEeecCCC
Q 035870 699 RIISCEMIEAVGHEFMEEFFGCCESLLAEDGLLVLQFISIPD 740 (842)
Q Consensus 699 ~i~s~~~~~~~~~~~~~~~~~~~~~~LkpgG~~~~~~~~~~~ 740 (842)
+|++... ...+..+++++.++|||||++++.++....
T Consensus 139 ~V~~d~~-----~~~~~~~l~~~~~~LkpGG~lv~d~~~~~g 175 (242)
T 3r3h_A 139 FIFIDAD-----KTNYLNYYELALKLVTPKGLIAIDNIFWDG 175 (242)
T ss_dssp EEEEESC-----GGGHHHHHHHHHHHEEEEEEEEEECSSSSS
T ss_pred EEEEcCC-----hHHhHHHHHHHHHhcCCCeEEEEECCccCC
Confidence 9998754 234788999999999999999998776543
No 222
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.39 E-value=1.2e-13 Score=138.54 Aligned_cols=116 Identities=21% Similarity=0.244 Sum_probs=75.3
Q ss_pred HHHHHHHHHcCC-CCCCeEEEeccCchHHHHHHHHh-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCcc
Q 035870 616 RKVSLLIEKARV-SKGQEVLEIGCGWGTLAIEIVKR-TGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLAK 693 (842)
Q Consensus 616 ~~~~~l~~~l~~-~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~ 693 (842)
..++.+++.+.. .++.+|||+|||+|.++..+++. ++.+|+|+|+|+.+++.|++++...++ +++++++|+.+..+
T Consensus 16 ~~~~~~~~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~ 93 (215)
T 4dzr_A 16 VLVEEAIRFLKRMPSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFGA--VVDWAAADGIEWLI 93 (215)
T ss_dssp HHHHHHHHHHTTCCTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC---------------------CCHHHHHHHHH
T ss_pred HHHHHHHHHhhhcCCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhCC--ceEEEEcchHhhhh
Confidence 345566777665 78899999999999999999998 467999999999999999999988776 78999999887334
Q ss_pred C-----CCccEEEEcchhhhcC------hh------------------hHHHHHHHHHhccccCcEEEE
Q 035870 694 A-----NKYDRIISCEMIEAVG------HE------------------FMEEFFGCCESLLAEDGLLVL 733 (842)
Q Consensus 694 ~-----~~fD~i~s~~~~~~~~------~~------------------~~~~~~~~~~~~LkpgG~~~~ 733 (842)
+ ++||+|+++..+.+.. .+ .+..+++++.++|||||++++
T Consensus 94 ~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~ 162 (215)
T 4dzr_A 94 ERAERGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVF 162 (215)
T ss_dssp HHHHTTCCBSEEEECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEE
T ss_pred hhhhccCcccEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEE
Confidence 4 8999999975543322 11 127889999999999999444
No 223
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.39 E-value=1.7e-12 Score=135.62 Aligned_cols=110 Identities=18% Similarity=0.243 Sum_probs=96.3
Q ss_pred HHHHHHcCCCCCCeEEEeccCchHHHHHHHHh--cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCccCCC
Q 035870 619 SLLIEKARVSKGQEVLEIGCGWGTLAIEIVKR--TGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLAKANK 696 (842)
Q Consensus 619 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~la~~--~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~~~ 696 (842)
..++..+.+.++.+|||+|||+|.++..+++. ++.+|+++|+|+++++.|+++++..++.++++++++|+.+..++++
T Consensus 102 ~~i~~~~~~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 181 (277)
T 1o54_A 102 SFIAMMLDVKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEGFDEKD 181 (277)
T ss_dssp HHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGCCSCCS
T ss_pred HHHHHHhCCCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHcccCCc
Confidence 46777888999999999999999999999987 3689999999999999999999998886689999999887654568
Q ss_pred ccEEEEcchhhhcChhhHHHHHHHHHhccccCcEEEEEe
Q 035870 697 YDRIISCEMIEAVGHEFMEEFFGCCESLLAEDGLLVLQF 735 (842)
Q Consensus 697 fD~i~s~~~~~~~~~~~~~~~~~~~~~~LkpgG~~~~~~ 735 (842)
||+|+++ .++ ...+++++.++|||||++++..
T Consensus 182 ~D~V~~~-----~~~--~~~~l~~~~~~L~pgG~l~~~~ 213 (277)
T 1o54_A 182 VDALFLD-----VPD--PWNYIDKCWEALKGGGRFATVC 213 (277)
T ss_dssp EEEEEEC-----CSC--GGGTHHHHHHHEEEEEEEEEEE
T ss_pred cCEEEEC-----CcC--HHHHHHHHHHHcCCCCEEEEEe
Confidence 9999984 333 4688999999999999999965
No 224
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.39 E-value=2e-12 Score=130.74 Aligned_cols=112 Identities=21% Similarity=0.238 Sum_probs=93.8
Q ss_pred HHHHHHcC--CCCCCeEEEeccCchHHHHHHHHhcC--CEEEEEcCCHHHHHHHHHHHHHcCC----CCCeEEEEccccC
Q 035870 619 SLLIEKAR--VSKGQEVLEIGCGWGTLAIEIVKRTG--CKYTGITLSEEQLKYAEMKVKEAGL----QDLIRLYLCDYRQ 690 (842)
Q Consensus 619 ~~l~~~l~--~~~~~~vLDiGcG~G~~~~~la~~~~--~~v~gid~s~~~~~~a~~~~~~~~l----~~~v~~~~~d~~~ 690 (842)
..+++.+. ++++.+|||||||+|.++..+++..+ .+|+++|+|+.+++.+++++...++ .++++++++|..+
T Consensus 65 ~~~l~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~ 144 (226)
T 1i1n_A 65 AYALELLFDQLHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRM 144 (226)
T ss_dssp HHHHHHTTTTSCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGG
T ss_pred HHHHHHHHhhCCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCccc
Confidence 35556664 77899999999999999999998743 6999999999999999999988664 3489999999886
Q ss_pred Cc-cCCCccEEEEcchhhhcChhhHHHHHHHHHhccccCcEEEEEeecC
Q 035870 691 LA-KANKYDRIISCEMIEAVGHEFMEEFFGCCESLLAEDGLLVLQFISI 738 (842)
Q Consensus 691 ~~-~~~~fD~i~s~~~~~~~~~~~~~~~~~~~~~~LkpgG~~~~~~~~~ 738 (842)
.. ..++||+|++...++++. +++.++|||||++++...+.
T Consensus 145 ~~~~~~~fD~i~~~~~~~~~~--------~~~~~~LkpgG~lv~~~~~~ 185 (226)
T 1i1n_A 145 GYAEEAPYDAIHVGAAAPVVP--------QALIDQLKPGGRLILPVGPA 185 (226)
T ss_dssp CCGGGCCEEEEEECSBBSSCC--------HHHHHTEEEEEEEEEEESCT
T ss_pred CcccCCCcCEEEECCchHHHH--------HHHHHhcCCCcEEEEEEecC
Confidence 65 457899999998887764 46889999999999976543
No 225
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.39 E-value=1.8e-12 Score=134.98 Aligned_cols=117 Identities=15% Similarity=0.125 Sum_probs=96.4
Q ss_pred HHHcCCCCCCeEEEeccCchHHHHHHHHh-cC-CEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCcc-----C
Q 035870 622 IEKARVSKGQEVLEIGCGWGTLAIEIVKR-TG-CKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLAK-----A 694 (842)
Q Consensus 622 ~~~l~~~~~~~vLDiGcG~G~~~~~la~~-~~-~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~-----~ 694 (842)
...+.++++.+|||+|||+|..+..+++. .+ .+|+++|+|+.+++.++++++..|+. +++++++|+.+++. .
T Consensus 76 ~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~-~v~~~~~D~~~~~~~~~~~~ 154 (274)
T 3ajd_A 76 PIVLNPREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVL-NTIIINADMRKYKDYLLKNE 154 (274)
T ss_dssp HHHHCCCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEESCHHHHHHHHHHTT
T ss_pred HHHhCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCC-cEEEEeCChHhcchhhhhcc
Confidence 34567789999999999999999999986 34 79999999999999999999999987 89999999987752 5
Q ss_pred CCccEEEEcchhhhcC----------------hhhHHHHHHHHHhccccCcEEEEEeecCC
Q 035870 695 NKYDRIISCEMIEAVG----------------HEFMEEFFGCCESLLAEDGLLVLQFISIP 739 (842)
Q Consensus 695 ~~fD~i~s~~~~~~~~----------------~~~~~~~~~~~~~~LkpgG~~~~~~~~~~ 739 (842)
++||+|++.......+ .+....+++++.++|||||++++.+++..
T Consensus 155 ~~fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs~~ 215 (274)
T 3ajd_A 155 IFFDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCSME 215 (274)
T ss_dssp CCEEEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESCCC
T ss_pred ccCCEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECCCC
Confidence 7899999973221111 02357899999999999999999877654
No 226
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.38 E-value=1.6e-12 Score=135.64 Aligned_cols=115 Identities=17% Similarity=0.196 Sum_probs=91.7
Q ss_pred HHHHHHcCCCCCCeEEEeccCchHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCccCCCc-
Q 035870 619 SLLIEKARVSKGQEVLEIGCGWGTLAIEIVKRTGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLAKANKY- 697 (842)
Q Consensus 619 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~~~f- 697 (842)
+.+++.+...++.+|||+|||+|.++..+++.++++|+|+|+|+++++.|+++++.+++.++++++++|+.+..+ ++|
T Consensus 113 ~~~l~~~~~~~~~~vLDlG~GsG~~~~~la~~~~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~~~~~-~~f~ 191 (284)
T 1nv8_A 113 ELALELIRKYGIKTVADIGTGSGAIGVSVAKFSDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEPFK-EKFA 191 (284)
T ss_dssp HHHHHHHHHHTCCEEEEESCTTSHHHHHHHHHSSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGGGG-GGTT
T ss_pred HHHHHHhcccCCCEEEEEeCchhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcchhhcc-cccC
Confidence 344444433467799999999999999999876789999999999999999999999998789999999887433 578
Q ss_pred --cEEEEcchhh-----------hcCh------hhHHHHHHHHH-hccccCcEEEEE
Q 035870 698 --DRIISCEMIE-----------AVGH------EFMEEFFGCCE-SLLAEDGLLVLQ 734 (842)
Q Consensus 698 --D~i~s~~~~~-----------~~~~------~~~~~~~~~~~-~~LkpgG~~~~~ 734 (842)
|+|+|+.... |-+. ++...+++++. +.|||||.+++.
T Consensus 192 ~~D~IvsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e 248 (284)
T 1nv8_A 192 SIEMILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLME 248 (284)
T ss_dssp TCCEEEECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEE
T ss_pred CCCEEEEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEE
Confidence 9999984322 2211 11227899999 999999999984
No 227
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.38 E-value=7.7e-13 Score=135.28 Aligned_cols=106 Identities=14% Similarity=0.121 Sum_probs=91.3
Q ss_pred CCCCeEEEeccCchHHHHHHHHh-c-CCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCC-c-c------CCCc
Q 035870 628 SKGQEVLEIGCGWGTLAIEIVKR-T-GCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQL-A-K------ANKY 697 (842)
Q Consensus 628 ~~~~~vLDiGcG~G~~~~~la~~-~-~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~-~-~------~~~f 697 (842)
.++.+|||||||+|..+..+++. + +++|+++|+|+++++.|+++++..++.++++++++|+.+. + . .++|
T Consensus 78 ~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~f 157 (247)
T 1sui_A 78 INAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHGSY 157 (247)
T ss_dssp TTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSGGGTTCB
T ss_pred hCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHhccCCCCCE
Confidence 45679999999999999999987 3 7899999999999999999999999977899999998764 2 1 5789
Q ss_pred cEEEEcchhhhcChhhHHHHHHHHHhccccCcEEEEEeecC
Q 035870 698 DRIISCEMIEAVGHEFMEEFFGCCESLLAEDGLLVLQFISI 738 (842)
Q Consensus 698 D~i~s~~~~~~~~~~~~~~~~~~~~~~LkpgG~~~~~~~~~ 738 (842)
|+|++... ...+..+++++.++|||||++++..+..
T Consensus 158 D~V~~d~~-----~~~~~~~l~~~~~~LkpGG~lv~d~~~~ 193 (247)
T 1sui_A 158 DFIFVDAD-----KDNYLNYHKRLIDLVKVGGVIGYDNTLW 193 (247)
T ss_dssp SEEEECSC-----STTHHHHHHHHHHHBCTTCCEEEECTTG
T ss_pred EEEEEcCc-----hHHHHHHHHHHHHhCCCCeEEEEecCCc
Confidence 99998643 2347899999999999999999976544
No 228
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=99.38 E-value=1.9e-12 Score=142.67 Aligned_cols=192 Identities=13% Similarity=0.069 Sum_probs=107.0
Q ss_pred hHHHHHHHHHhhhcCceEEeCCCeeEEEeCCCcEEEEeCCCcEEeCCEEEEccChHHHHHhhcCCCChHHHHhcccccee
Q 035870 215 HSYVNKVRKQLESWGCQIRTSSEVCSVLPADKGCTIVCGDGSREFYNSCVMALHAPDALKILGNQATFDETRILGAFQYV 294 (842)
Q Consensus 215 ~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VV~A~p~~~~~~ll~~~~~~~~~~~l~~~~~~ 294 (842)
..+++.|.+.+++.|++|+++++|++|+.+++++.|++.+| ++.||.||+|+..+. ..+++. .. ..++..
T Consensus 150 ~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~~~v~~~~g-~~~a~~vV~A~G~~~-~~l~~~-~g-------~~~pl~ 219 (389)
T 2gf3_A 150 ENCIRAYRELAEARGAKVLTHTRVEDFDISPDSVKIETANG-SYTADKLIVSMGAWN-SKLLSK-LN-------LDIPLQ 219 (389)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEECSSCEEEEETTE-EEEEEEEEECCGGGH-HHHGGG-GT-------EECCCE
T ss_pred HHHHHHHHHHHHHCCCEEEcCcEEEEEEecCCeEEEEeCCC-EEEeCEEEEecCccH-HHHhhh-hc-------cCCceE
Confidence 58889999999999999999999999999888899988777 799999999998764 334332 00 011222
Q ss_pred ec-eEEEecCCCC--cC---CCCC-Ccce---eeecc-cCCC-ceEEEEEcc----cccC----C--C----CCCCCeEE
Q 035870 295 YS-DIFLHRDKRF--MP---QNPA-AWSA---WNFLE-SFDS-KVCLTYWLN----VLQN----L--G----ETSLPFLV 348 (842)
Q Consensus 295 ~~-~v~l~~~~~~--~p---~~~~-~~~~---~~~~~-~~~~-~~~v~~~~~----~l~~----l--~----~~~~~~~~ 348 (842)
+. ..++.++..- +. .... .+.. ..|.. .+++ ...+..... .... . . +.+.+.+.
T Consensus 220 ~~rg~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~y~~p~~~g~~~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 299 (389)
T 2gf3_A 220 PYRQVVGFFESDESKYSNDIDFPGFMVEVPNGIYYGFPSFGGCGLKLGYHTFGQKIDPDTINREFGVYPEDESNLRAFLE 299 (389)
T ss_dssp EEEEEEEEECCCHHHHBGGGTCCEEEEEETTEEEEEECBSTTCCEEEEESSCCEECCTTTCCCCTTSSHHHHHHHHHHHH
T ss_pred EEEEEEEEEecCcccccccccCCEEEEeCCCCcEEEcCCCCCCcEEEEEcCCCCccCcccccCccCCCHHHHHHHHHHHH
Confidence 21 1112222210 00 0000 0000 11221 1223 444432110 0000 0 0 00011112
Q ss_pred ecCCCCCCcceeEEEEcCCCCCCHHHHHHHHhhhhhcCCCCeEEeccccCCCCCchhHhHHHHHHHHhcCCccc
Q 035870 349 TLNPDHVPEHTLLKWSTGHPVPSVAASKASLELDHIQGKRGIWFCGAYQGYGFHEDGLKAGMTAAHGVLGKSCT 422 (842)
Q Consensus 349 ~l~~~~~~~~~~~~w~~~~p~~~~~~~~~~~~~~~~~~~~~l~~aG~~~g~G~~e~A~~SG~~aA~~Il~~~~~ 422 (842)
.+.|.... .+...|...+|.- ++..+.+...+..+|+|++.++.|.|+ ..|..+|+.+|+.|++...+
T Consensus 300 ~~~P~l~~-~~~~~w~g~r~~t----~D~~p~ig~~~~~~~l~~a~G~~g~G~-~~ap~~g~~la~~i~~~~~~ 367 (389)
T 2gf3_A 300 EYMPGANG-ELKRGAVCMYTKT----LDEHFIIDLHPEHSNVVIAAGFSGHGF-KFSSGVGEVLSQLALTGKTE 367 (389)
T ss_dssp HHCGGGCS-CEEEEEEEEEEEC----TTSCCEEEEETTEEEEEEEECCTTCCG-GGHHHHHHHHHHHHHHSCCS
T ss_pred HhCCCCCC-CceEEEEEEeccC----CCCCeEEccCCCCCCEEEEECCccccc-cccHHHHHHHHHHHcCCCCC
Confidence 22332222 4555675544321 122233333334579999999999999 89999999999999987633
No 229
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.37 E-value=3.6e-12 Score=130.91 Aligned_cols=110 Identities=17% Similarity=0.199 Sum_probs=97.2
Q ss_pred HHHHHHcCCCCCCeEEEeccCchHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCc-cCCCc
Q 035870 619 SLLIEKARVSKGQEVLEIGCGWGTLAIEIVKRTGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLA-KANKY 697 (842)
Q Consensus 619 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~-~~~~f 697 (842)
..+++.+.+.++.+|||+|||+|.++..+++. +.+|+++|+|+++++.|+++.+..++.+++++..+|+.+.. ++++|
T Consensus 81 ~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 159 (248)
T 2yvl_A 81 FYIALKLNLNKEKRVLEFGTGSGALLAVLSEV-AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAEVPEGIF 159 (248)
T ss_dssp HHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH-SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSCCCTTCB
T ss_pred HHHHHhcCCCCCCEEEEeCCCccHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcccCCCcc
Confidence 46777888899999999999999999999998 88999999999999999999999888778999999998876 56789
Q ss_pred cEEEEcchhhhcChhhHHHHHHHHHhccccCcEEEEEee
Q 035870 698 DRIISCEMIEAVGHEFMEEFFGCCESLLAEDGLLVLQFI 736 (842)
Q Consensus 698 D~i~s~~~~~~~~~~~~~~~~~~~~~~LkpgG~~~~~~~ 736 (842)
|+|++. .++ +..+++++.++|||||++++...
T Consensus 160 D~v~~~-----~~~--~~~~l~~~~~~L~~gG~l~~~~~ 191 (248)
T 2yvl_A 160 HAAFVD-----VRE--PWHYLEKVHKSLMEGAPVGFLLP 191 (248)
T ss_dssp SEEEEC-----SSC--GGGGHHHHHHHBCTTCEEEEEES
T ss_pred cEEEEC-----CcC--HHHHHHHHHHHcCCCCEEEEEeC
Confidence 999984 333 56889999999999999999654
No 230
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.37 E-value=9.8e-13 Score=131.96 Aligned_cols=115 Identities=18% Similarity=0.239 Sum_probs=93.9
Q ss_pred CCCCCeEEEeccCchHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCc-cCCCccEEEEcch
Q 035870 627 VSKGQEVLEIGCGWGTLAIEIVKRTGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLA-KANKYDRIISCEM 705 (842)
Q Consensus 627 ~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~-~~~~fD~i~s~~~ 705 (842)
..++.+|||||||+|.++..+ +.+|+|+|+|+. +++++++|+.+++ ++++||+|++..+
T Consensus 65 ~~~~~~vLDiG~G~G~~~~~l----~~~v~~~D~s~~----------------~~~~~~~d~~~~~~~~~~fD~v~~~~~ 124 (215)
T 2zfu_A 65 RPASLVVADFGCGDCRLASSI----RNPVHCFDLASL----------------DPRVTVCDMAQVPLEDESVDVAVFCLS 124 (215)
T ss_dssp SCTTSCEEEETCTTCHHHHHC----CSCEEEEESSCS----------------STTEEESCTTSCSCCTTCEEEEEEESC
T ss_pred cCCCCeEEEECCcCCHHHHHh----hccEEEEeCCCC----------------CceEEEeccccCCCCCCCEeEEEEehh
Confidence 467789999999999998876 368999999987 3678999999887 5678999999999
Q ss_pred hhhcChhhHHHHHHHHHhccccCcEEEEEeecCCCcccccccCccchhhhcccCCCCCCCHHHHHHHHhhcCCcEEEEEE
Q 035870 706 IEAVGHEFMEEFFGCCESLLAEDGLLVLQFISIPDERYNEYRLSSDFIKEYIFPGGCLPSLSRITSAMSVASRLCVEQVE 785 (842)
Q Consensus 706 ~~~~~~~~~~~~~~~~~~~LkpgG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~gf~v~~~~ 785 (842)
+++ . ++..+++++.++|||||++++.++.. ..++..++.+.+.+ +||+++...
T Consensus 125 l~~-~--~~~~~l~~~~~~L~~gG~l~i~~~~~-----------------------~~~~~~~~~~~l~~-~Gf~~~~~~ 177 (215)
T 2zfu_A 125 LMG-T--NIRDFLEEANRVLKPGGLLKVAEVSS-----------------------RFEDVRTFLRAVTK-LGFKIVSKD 177 (215)
T ss_dssp CCS-S--CHHHHHHHHHHHEEEEEEEEEEECGG-----------------------GCSCHHHHHHHHHH-TTEEEEEEE
T ss_pred ccc-c--CHHHHHHHHHHhCCCCeEEEEEEcCC-----------------------CCCCHHHHHHHHHH-CCCEEEEEe
Confidence 964 3 48999999999999999999975431 11367888888876 899988866
Q ss_pred ecC
Q 035870 786 NIG 788 (842)
Q Consensus 786 ~~~ 788 (842)
...
T Consensus 178 ~~~ 180 (215)
T 2zfu_A 178 LTN 180 (215)
T ss_dssp CCS
T ss_pred cCC
Confidence 543
No 231
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.37 E-value=4.9e-13 Score=137.67 Aligned_cols=152 Identities=13% Similarity=0.119 Sum_probs=102.7
Q ss_pred HHHHHHHHHcCCC-CCCeEEEeccCchHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeE-EEEccccCCc-
Q 035870 616 RKVSLLIEKARVS-KGQEVLEIGCGWGTLAIEIVKRTGCKYTGITLSEEQLKYAEMKVKEAGLQDLIR-LYLCDYRQLA- 692 (842)
Q Consensus 616 ~~~~~l~~~l~~~-~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~-~~~~d~~~~~- 692 (842)
.|+..+++.+.+. ++.+|||||||||.++..+++....+|+|+|+|++|++.+.++- .++. +...|++.+.
T Consensus 71 ~Kl~~~l~~~~~~~~g~~vLDiGcGTG~~t~~L~~~ga~~V~aVDvs~~mL~~a~r~~------~rv~~~~~~ni~~l~~ 144 (291)
T 3hp7_A 71 LKLEKALAVFNLSVEDMITIDIGASTGGFTDVMLQNGAKLVYAVDVGTNQLVWKLRQD------DRVRSMEQYNFRYAEP 144 (291)
T ss_dssp HHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSSSCSCHHHHTC------TTEEEECSCCGGGCCG
T ss_pred HHHHHHHHhcCCCccccEEEecCCCccHHHHHHHhCCCCEEEEEECCHHHHHHHHHhC------cccceecccCceecch
Confidence 4667788888775 67899999999999999999984459999999999999854421 1443 3344555554
Q ss_pred ---cCCCccEEEEcchhhhcChhhHHHHHHHHHhccccCcEEEEEeecCCCcccccccCccchhhhc-cc--CCCCCCCH
Q 035870 693 ---KANKYDRIISCEMIEAVGHEFMEEFFGCCESLLAEDGLLVLQFISIPDERYNEYRLSSDFIKEY-IF--PGGCLPSL 766 (842)
Q Consensus 693 ---~~~~fD~i~s~~~~~~~~~~~~~~~~~~~~~~LkpgG~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~--p~~~~~~~ 766 (842)
+..+||.|++..+++++ ..++.+++++|||||++++.. .|. ++.. ...+.+. +. |..+....
T Consensus 145 ~~l~~~~fD~v~~d~sf~sl-----~~vL~e~~rvLkpGG~lv~lv--kPq--fe~~---~~~~~~~G~vrd~~~~~~~~ 212 (291)
T 3hp7_A 145 VDFTEGLPSFASIDVSFISL-----NLILPALAKILVDGGQVVALV--KPQ--FEAG---REQIGKNGIVRESSIHEKVL 212 (291)
T ss_dssp GGCTTCCCSEEEECCSSSCG-----GGTHHHHHHHSCTTCEEEEEE--CGG--GTSC---GGGCC-CCCCCCHHHHHHHH
T ss_pred hhCCCCCCCEEEEEeeHhhH-----HHHHHHHHHHcCcCCEEEEEE--Ccc--cccC---hhhcCCCCccCCHHHHHHHH
Confidence 23459999998887754 678999999999999999852 221 1111 1111110 00 00111256
Q ss_pred HHHHHHHhhcCCcEEEEEEe
Q 035870 767 SRITSAMSVASRLCVEQVEN 786 (842)
Q Consensus 767 ~~~~~~~~~~~gf~v~~~~~ 786 (842)
.++.+.+.+ +||.+..+..
T Consensus 213 ~~v~~~~~~-~Gf~v~~~~~ 231 (291)
T 3hp7_A 213 ETVTAFAVD-YGFSVKGLDF 231 (291)
T ss_dssp HHHHHHHHH-TTEEEEEEEE
T ss_pred HHHHHHHHH-CCCEEEEEEE
Confidence 677777776 8999888765
No 232
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.36 E-value=2.5e-12 Score=134.78 Aligned_cols=113 Identities=19% Similarity=0.294 Sum_probs=97.2
Q ss_pred HHHHHHHcCCCCCCeEEEeccCchHHHHHHHHh--cCCEEEEEcCCHHHHHHHHHHHHHc-C-CCCCeEEEEccccCCc-
Q 035870 618 VSLLIEKARVSKGQEVLEIGCGWGTLAIEIVKR--TGCKYTGITLSEEQLKYAEMKVKEA-G-LQDLIRLYLCDYRQLA- 692 (842)
Q Consensus 618 ~~~l~~~l~~~~~~~vLDiGcG~G~~~~~la~~--~~~~v~gid~s~~~~~~a~~~~~~~-~-l~~~v~~~~~d~~~~~- 692 (842)
...++..+.+.++.+|||+|||+|.++..+++. ++.+|+++|+|+++++.|+++++.. + +.++++++++|+.+.+
T Consensus 88 ~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~~~ 167 (280)
T 1i9g_A 88 AAQIVHEGDIFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADSEL 167 (280)
T ss_dssp HHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGCCC
T ss_pred HHHHHHHcCCCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhcCC
Confidence 356778888899999999999999999999986 4689999999999999999999887 5 5568999999998876
Q ss_pred cCCCccEEEEcchhhhcChhhHHHHHHHHHhccccCcEEEEEeec
Q 035870 693 KANKYDRIISCEMIEAVGHEFMEEFFGCCESLLAEDGLLVLQFIS 737 (842)
Q Consensus 693 ~~~~fD~i~s~~~~~~~~~~~~~~~~~~~~~~LkpgG~~~~~~~~ 737 (842)
++++||+|++. +++ +..+++++.++|||||++++....
T Consensus 168 ~~~~~D~v~~~-----~~~--~~~~l~~~~~~L~pgG~l~~~~~~ 205 (280)
T 1i9g_A 168 PDGSVDRAVLD-----MLA--PWEVLDAVSRLLVAGGVLMVYVAT 205 (280)
T ss_dssp CTTCEEEEEEE-----SSC--GGGGHHHHHHHEEEEEEEEEEESS
T ss_pred CCCceeEEEEC-----CcC--HHHHHHHHHHhCCCCCEEEEEeCC
Confidence 56789999983 333 458899999999999999997654
No 233
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.36 E-value=9e-13 Score=131.70 Aligned_cols=105 Identities=17% Similarity=0.131 Sum_probs=89.6
Q ss_pred CCCCeEEEeccCchHHHHHHHHh-c-CCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCC-c-cCCCccEEEEc
Q 035870 628 SKGQEVLEIGCGWGTLAIEIVKR-T-GCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQL-A-KANKYDRIISC 703 (842)
Q Consensus 628 ~~~~~vLDiGcG~G~~~~~la~~-~-~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~-~-~~~~fD~i~s~ 703 (842)
.++.+|||||||+|..+..+++. + +.+|+++|+|+++++.|+++++..++.++++++++|..+. + .++ ||+|++.
T Consensus 55 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~-fD~v~~~ 133 (210)
T 3c3p_A 55 KQPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAAGQRD-IDILFMD 133 (210)
T ss_dssp HCCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHTTCCS-EEEEEEE
T ss_pred hCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHhccCCC-CCEEEEc
Confidence 35679999999999999999987 3 6899999999999999999999988877899999998764 3 335 9999987
Q ss_pred chhhhcChhhHHHHHHHHHhccccCcEEEEEeecC
Q 035870 704 EMIEAVGHEFMEEFFGCCESLLAEDGLLVLQFISI 738 (842)
Q Consensus 704 ~~~~~~~~~~~~~~~~~~~~~LkpgG~~~~~~~~~ 738 (842)
.. ......+++++.++|||||++++.+...
T Consensus 134 ~~-----~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 163 (210)
T 3c3p_A 134 CD-----VFNGADVLERMNRCLAKNALLIAVNALR 163 (210)
T ss_dssp TT-----TSCHHHHHHHHGGGEEEEEEEEEESSSS
T ss_pred CC-----hhhhHHHHHHHHHhcCCCeEEEEECccc
Confidence 43 2347899999999999999999976543
No 234
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.36 E-value=2e-12 Score=130.97 Aligned_cols=111 Identities=16% Similarity=0.278 Sum_probs=93.0
Q ss_pred HHHHHHc--CCCCCCeEEEeccCchHHHHHHHHhcC------CEEEEEcCCHHHHHHHHHHHHHcCC----CCCeEEEEc
Q 035870 619 SLLIEKA--RVSKGQEVLEIGCGWGTLAIEIVKRTG------CKYTGITLSEEQLKYAEMKVKEAGL----QDLIRLYLC 686 (842)
Q Consensus 619 ~~l~~~l--~~~~~~~vLDiGcG~G~~~~~la~~~~------~~v~gid~s~~~~~~a~~~~~~~~l----~~~v~~~~~ 686 (842)
..+++.+ .++++.+|||||||+|.++..+++..+ .+|+++|+|+++++.|+++++..++ .++++++++
T Consensus 68 ~~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~ 147 (227)
T 2pbf_A 68 ALSLKRLINVLKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHK 147 (227)
T ss_dssp HHHHHHHTTTSCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEEC
T ss_pred HHHHHHHHhhCCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEEC
Confidence 3455555 478899999999999999999998743 5999999999999999999998873 348999999
Q ss_pred cccCC-----ccCCCccEEEEcchhhhcChhhHHHHHHHHHhccccCcEEEEEeec
Q 035870 687 DYRQL-----AKANKYDRIISCEMIEAVGHEFMEEFFGCCESLLAEDGLLVLQFIS 737 (842)
Q Consensus 687 d~~~~-----~~~~~fD~i~s~~~~~~~~~~~~~~~~~~~~~~LkpgG~~~~~~~~ 737 (842)
|..+. ...++||+|++...++++. +++.++|||||++++....
T Consensus 148 d~~~~~~~~~~~~~~fD~I~~~~~~~~~~--------~~~~~~LkpgG~lv~~~~~ 195 (227)
T 2pbf_A 148 NIYQVNEEEKKELGLFDAIHVGASASELP--------EILVDLLAENGKLIIPIEE 195 (227)
T ss_dssp CGGGCCHHHHHHHCCEEEEEECSBBSSCC--------HHHHHHEEEEEEEEEEEEE
T ss_pred ChHhcccccCccCCCcCEEEECCchHHHH--------HHHHHhcCCCcEEEEEEcc
Confidence 98775 3347899999999888763 5688999999999997654
No 235
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.36 E-value=1.2e-12 Score=132.38 Aligned_cols=112 Identities=16% Similarity=0.188 Sum_probs=92.8
Q ss_pred HHHHHHHc--CCCCCCeEEEeccCchHHHHHHHHhcC-------CEEEEEcCCHHHHHHHHHHHHHcCC----CCCeEEE
Q 035870 618 VSLLIEKA--RVSKGQEVLEIGCGWGTLAIEIVKRTG-------CKYTGITLSEEQLKYAEMKVKEAGL----QDLIRLY 684 (842)
Q Consensus 618 ~~~l~~~l--~~~~~~~vLDiGcG~G~~~~~la~~~~-------~~v~gid~s~~~~~~a~~~~~~~~l----~~~v~~~ 684 (842)
...+++.+ .++++.+|||||||+|.++..+++..+ .+|+++|+|+++++.|++++...++ .++++++
T Consensus 71 ~~~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~ 150 (227)
T 1r18_A 71 HAFALEYLRDHLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIV 150 (227)
T ss_dssp HHHHHHHTTTTCCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEE
T ss_pred HHHHHHHHHhhCCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEE
Confidence 34566666 478899999999999999999998633 5999999999999999999887651 2379999
Q ss_pred EccccCCc-cCCCccEEEEcchhhhcChhhHHHHHHHHHhccccCcEEEEEeec
Q 035870 685 LCDYRQLA-KANKYDRIISCEMIEAVGHEFMEEFFGCCESLLAEDGLLVLQFIS 737 (842)
Q Consensus 685 ~~d~~~~~-~~~~fD~i~s~~~~~~~~~~~~~~~~~~~~~~LkpgG~~~~~~~~ 737 (842)
++|..+.. ..++||+|++...++++. +++.++|||||++++....
T Consensus 151 ~~d~~~~~~~~~~fD~I~~~~~~~~~~--------~~~~~~LkpgG~lvi~~~~ 196 (227)
T 1r18_A 151 EGDGRKGYPPNAPYNAIHVGAAAPDTP--------TELINQLASGGRLIVPVGP 196 (227)
T ss_dssp ESCGGGCCGGGCSEEEEEECSCBSSCC--------HHHHHTEEEEEEEEEEESC
T ss_pred ECCcccCCCcCCCccEEEECCchHHHH--------HHHHHHhcCCCEEEEEEec
Confidence 99988733 337899999999988875 4689999999999997643
No 236
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=99.36 E-value=1.5e-12 Score=141.43 Aligned_cols=156 Identities=13% Similarity=0.110 Sum_probs=117.6
Q ss_pred HHHHHc--CCCCCCeEEEeccCchHHHHHHHHh-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCccCCC
Q 035870 620 LLIEKA--RVSKGQEVLEIGCGWGTLAIEIVKR-TGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLAKANK 696 (842)
Q Consensus 620 ~l~~~l--~~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~~~ 696 (842)
.+++.+ .+.++.+|||||||+|.++..++++ ++.+++++|+ +.+++.|++ . .+++++.+|+.+ +. .+
T Consensus 182 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~-~~v~~~~~d~~~-~~-~~ 251 (358)
T 1zg3_A 182 LVLQENKRVFEGLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-PQVVGNLTG------N-ENLNFVGGDMFK-SI-PS 251 (358)
T ss_dssp HHHHHTHHHHHTCSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-HHHHSSCCC------C-SSEEEEECCTTT-CC-CC
T ss_pred HHHHhcchhccCCCEEEEECCCcCHHHHHHHHHCCCCeEEEecc-HHHHhhccc------C-CCcEEEeCccCC-CC-CC
Confidence 344544 3456789999999999999999998 6789999999 788877764 2 269999999877 42 25
Q ss_pred ccEEEEcchhhhcChhhHHHHHHHHHhcccc---CcEEEEEeecCCCcccc----cccCccchhhhcccCCCCCCCHHHH
Q 035870 697 YDRIISCEMIEAVGHEFMEEFFGCCESLLAE---DGLLVLQFISIPDERYN----EYRLSSDFIKEYIFPGGCLPSLSRI 769 (842)
Q Consensus 697 fD~i~s~~~~~~~~~~~~~~~~~~~~~~Lkp---gG~~~~~~~~~~~~~~~----~~~~~~~~~~~~i~p~~~~~~~~~~ 769 (842)
||+|++..++||++++....++++++++||| ||++++.+...++.... ......++.. ...+++...+..++
T Consensus 252 ~D~v~~~~vlh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~-~~~~~g~~~t~~e~ 330 (358)
T 1zg3_A 252 ADAVLLKWVLHDWNDEQSLKILKNSKEAISHKGKDGKVIIIDISIDETSDDRGLTELQLDYDLVM-LTMFLGKERTKQEW 330 (358)
T ss_dssp CSEEEEESCGGGSCHHHHHHHHHHHHHHTGGGGGGCEEEEEECEECTTCSCHHHHHHHHHHHHHH-HHHHSCCCEEHHHH
T ss_pred ceEEEEcccccCCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeccCCCCccchhhhHHHhhCHHH-hccCCCCCCCHHHH
Confidence 9999999999999987677999999999999 99999988776543211 0111111111 11345677799999
Q ss_pred HHHHhhcCCcEEEEEEec
Q 035870 770 TSAMSVASRLCVEQVENI 787 (842)
Q Consensus 770 ~~~~~~~~gf~v~~~~~~ 787 (842)
.+.+.+ +||++.++...
T Consensus 331 ~~ll~~-aGf~~~~~~~~ 347 (358)
T 1zg3_A 331 EKLIYD-AGFSSYKITPI 347 (358)
T ss_dssp HHHHHH-TTCCEEEEEEE
T ss_pred HHHHHH-cCCCeeEEEec
Confidence 888887 89998887664
No 237
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.36 E-value=1.1e-12 Score=134.04 Aligned_cols=108 Identities=22% Similarity=0.196 Sum_probs=91.7
Q ss_pred CCCCCCeEEEeccCchHHHHHHHHhc--CCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCC-c---c------
Q 035870 626 RVSKGQEVLEIGCGWGTLAIEIVKRT--GCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQL-A---K------ 693 (842)
Q Consensus 626 ~~~~~~~vLDiGcG~G~~~~~la~~~--~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~-~---~------ 693 (842)
...++.+|||||||+|..+..+++.. +.+|+++|+|+++++.|+++++..++.++++++++|..+. + .
T Consensus 57 ~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~~~~~ 136 (239)
T 2hnk_A 57 KISGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLIDSKSAPS 136 (239)
T ss_dssp HHHTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCSSCCG
T ss_pred HhhCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhccccc
Confidence 34578899999999999999999883 6899999999999999999999999877799999998653 2 1
Q ss_pred -------C-CCccEEEEcchhhhcChhhHHHHHHHHHhccccCcEEEEEeecC
Q 035870 694 -------A-NKYDRIISCEMIEAVGHEFMEEFFGCCESLLAEDGLLVLQFISI 738 (842)
Q Consensus 694 -------~-~~fD~i~s~~~~~~~~~~~~~~~~~~~~~~LkpgG~~~~~~~~~ 738 (842)
+ ++||+|++....+ .+..+++++.++|||||++++..+..
T Consensus 137 ~~~~f~~~~~~fD~I~~~~~~~-----~~~~~l~~~~~~L~pgG~lv~~~~~~ 184 (239)
T 2hnk_A 137 WASDFAFGPSSIDLFFLDADKE-----NYPNYYPLILKLLKPGGLLIADNVLW 184 (239)
T ss_dssp GGTTTCCSTTCEEEEEECSCGG-----GHHHHHHHHHHHEEEEEEEEEECSSG
T ss_pred ccccccCCCCCcCEEEEeCCHH-----HHHHHHHHHHHHcCCCeEEEEEcccc
Confidence 2 7899999975433 36789999999999999999976543
No 238
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.35 E-value=4.1e-12 Score=137.65 Aligned_cols=118 Identities=25% Similarity=0.286 Sum_probs=99.4
Q ss_pred HHHHHHHcCCCCCCeEEEeccCchHHHHHHHHhc--CCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCc-cC
Q 035870 618 VSLLIEKARVSKGQEVLEIGCGWGTLAIEIVKRT--GCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLA-KA 694 (842)
Q Consensus 618 ~~~l~~~l~~~~~~~vLDiGcG~G~~~~~la~~~--~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~-~~ 694 (842)
...++..+..+++.+|||+|||+|.+++.++... +.+|+|+|+|+.+++.|+++++.+|++ ++++.++|+.+++ +.
T Consensus 192 a~~l~~~~~~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~-~i~~~~~D~~~~~~~~ 270 (354)
T 3tma_A 192 AQALLRLADARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLS-WIRFLRADARHLPRFF 270 (354)
T ss_dssp HHHHHHHTTCCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCT-TCEEEECCGGGGGGTC
T ss_pred HHHHHHHhCCCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCC-ceEEEeCChhhCcccc
Confidence 3456777788899999999999999999999873 489999999999999999999999998 8999999999987 55
Q ss_pred CCccEEEEcchhhhc-C-----hhhHHHHHHHHHhccccCcEEEEEee
Q 035870 695 NKYDRIISCEMIEAV-G-----HEFMEEFFGCCESLLAEDGLLVLQFI 736 (842)
Q Consensus 695 ~~fD~i~s~~~~~~~-~-----~~~~~~~~~~~~~~LkpgG~~~~~~~ 736 (842)
+.||+|+++..+..- + .+.+..+++++.++|||||++++.+.
T Consensus 271 ~~~D~Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~ 318 (354)
T 3tma_A 271 PEVDRILANPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTL 318 (354)
T ss_dssp CCCSEEEECCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEES
T ss_pred CCCCEEEECCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeC
Confidence 679999998664321 1 11247899999999999999999543
No 239
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.35 E-value=1.8e-12 Score=133.31 Aligned_cols=105 Identities=18% Similarity=0.237 Sum_probs=87.0
Q ss_pred CCCeEEEeccCchH----HHHHHHHh-c----CCEEEEEcCCHHHHHHHHHHHHH-----------------------cC
Q 035870 629 KGQEVLEIGCGWGT----LAIEIVKR-T----GCKYTGITLSEEQLKYAEMKVKE-----------------------AG 676 (842)
Q Consensus 629 ~~~~vLDiGcG~G~----~~~~la~~-~----~~~v~gid~s~~~~~~a~~~~~~-----------------------~~ 676 (842)
++.+|||+|||+|. +++.+++. + +.+|+|+|+|+++++.|++++-. .+
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 45799999999998 66667765 2 36999999999999999986410 00
Q ss_pred -------CCCCeEEEEccccCCc-c-CCCccEEEEcchhhhcChhhHHHHHHHHHhccccCcEEEE
Q 035870 677 -------LQDLIRLYLCDYRQLA-K-ANKYDRIISCEMIEAVGHEFMEEFFGCCESLLAEDGLLVL 733 (842)
Q Consensus 677 -------l~~~v~~~~~d~~~~~-~-~~~fD~i~s~~~~~~~~~~~~~~~~~~~~~~LkpgG~~~~ 733 (842)
+.++|+|.+.|+.+.+ + .++||+|+|..++.|+.++....+++++++.|||||++++
T Consensus 185 ~~~v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI~crnvliyf~~~~~~~vl~~~~~~L~pgG~L~l 250 (274)
T 1af7_A 185 LVRVRQELANYVEFSSVNLLEKQYNVPGPFDAIFCRNVMIYFDKTTQEDILRRFVPLLKPDGLLFA 250 (274)
T ss_dssp EEEECHHHHTTEEEEECCTTCSSCCCCCCEEEEEECSSGGGSCHHHHHHHHHHHGGGEEEEEEEEE
T ss_pred ceeechhhcccCeEEecccCCCCCCcCCCeeEEEECCchHhCCHHHHHHHHHHHHHHhCCCcEEEE
Confidence 1136999999998854 2 5789999999999999987789999999999999999998
No 240
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.34 E-value=4.4e-12 Score=133.76 Aligned_cols=109 Identities=20% Similarity=0.181 Sum_probs=85.2
Q ss_pred CCCCCeEEEeccCchHHHHHHHHh-cCCEEEEEcCCHHHHHHHHHHHHH---cCCCCCeEEEEccccCCc---cCCCccE
Q 035870 627 VSKGQEVLEIGCGWGTLAIEIVKR-TGCKYTGITLSEEQLKYAEMKVKE---AGLQDLIRLYLCDYRQLA---KANKYDR 699 (842)
Q Consensus 627 ~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gid~s~~~~~~a~~~~~~---~~l~~~v~~~~~d~~~~~---~~~~fD~ 699 (842)
.+++.+|||||||+|.++..+++. +..+|+++|+|+.+++.|++++.. .....+++++.+|+.+.. .+++||+
T Consensus 93 ~~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDv 172 (304)
T 3bwc_A 93 HPKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDV 172 (304)
T ss_dssp SSSCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEE
T ss_pred CCCCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeE
Confidence 356789999999999999999987 457999999999999999998742 122348999999987765 3579999
Q ss_pred EEEcchhhhcChhhH--HHHHHHHHhccccCcEEEEEe
Q 035870 700 IISCEMIEAVGHEFM--EEFFGCCESLLAEDGLLVLQF 735 (842)
Q Consensus 700 i~s~~~~~~~~~~~~--~~~~~~~~~~LkpgG~~~~~~ 735 (842)
|++.....+.+...+ .+++++++++|||||+++++.
T Consensus 173 Ii~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 210 (304)
T 3bwc_A 173 VIIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQG 210 (304)
T ss_dssp EEEECC---------CCHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEec
Confidence 999776554333222 689999999999999999974
No 241
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.34 E-value=2.4e-12 Score=130.86 Aligned_cols=106 Identities=14% Similarity=0.103 Sum_probs=91.1
Q ss_pred CCCCeEEEeccCchHHHHHHHHh-c-CCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCc--c------CCCc
Q 035870 628 SKGQEVLEIGCGWGTLAIEIVKR-T-GCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLA--K------ANKY 697 (842)
Q Consensus 628 ~~~~~vLDiGcG~G~~~~~la~~-~-~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~--~------~~~f 697 (842)
.++.+|||||||+|..+..+++. + +.+|+++|+|+++++.|+++++..|+.++++++++|..+.. . .++|
T Consensus 69 ~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~f 148 (237)
T 3c3y_A 69 VNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQGQESEGSY 148 (237)
T ss_dssp TTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSTTCTTCE
T ss_pred hCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhccCCCCCc
Confidence 46679999999999999999987 3 68999999999999999999999999878999999987642 1 4789
Q ss_pred cEEEEcchhhhcChhhHHHHHHHHHhccccCcEEEEEeecC
Q 035870 698 DRIISCEMIEAVGHEFMEEFFGCCESLLAEDGLLVLQFISI 738 (842)
Q Consensus 698 D~i~s~~~~~~~~~~~~~~~~~~~~~~LkpgG~~~~~~~~~ 738 (842)
|+|++... ...+..+++.+.++|||||++++..+..
T Consensus 149 D~I~~d~~-----~~~~~~~l~~~~~~L~pGG~lv~d~~~~ 184 (237)
T 3c3y_A 149 DFGFVDAD-----KPNYIKYHERLMKLVKVGGIVAYDNTLW 184 (237)
T ss_dssp EEEEECSC-----GGGHHHHHHHHHHHEEEEEEEEEECTTG
T ss_pred CEEEECCc-----hHHHHHHHHHHHHhcCCCeEEEEecCCc
Confidence 99998643 2347899999999999999999976543
No 242
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.34 E-value=2.7e-12 Score=133.22 Aligned_cols=106 Identities=17% Similarity=0.174 Sum_probs=92.7
Q ss_pred CCCCCCeEEEeccCchHHHHHHHHh-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCccCCCccEEEEcc
Q 035870 626 RVSKGQEVLEIGCGWGTLAIEIVKR-TGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLAKANKYDRIISCE 704 (842)
Q Consensus 626 ~~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~~~fD~i~s~~ 704 (842)
.++++.+|||+|||+|.++..+++. .+++|+++|+|+++++.|+++++.+++. ++.++++|+.+.+..++||+|++..
T Consensus 116 ~~~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~l~-~~~~~~~d~~~~~~~~~~D~Vi~d~ 194 (272)
T 3a27_A 116 ISNENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNKLN-NVIPILADNRDVELKDVADRVIMGY 194 (272)
T ss_dssp SCCTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTTCS-SEEEEESCGGGCCCTTCEEEEEECC
T ss_pred hcCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCC-CEEEEECChHHcCccCCceEEEECC
Confidence 3678999999999999999999998 4569999999999999999999999986 7899999998874346899999987
Q ss_pred hhhhcChhhHHHHHHHHHhccccCcEEEEEeecC
Q 035870 705 MIEAVGHEFMEEFFGCCESLLAEDGLLVLQFISI 738 (842)
Q Consensus 705 ~~~~~~~~~~~~~~~~~~~~LkpgG~~~~~~~~~ 738 (842)
.. ....++.++.+.|||||.+++.+...
T Consensus 195 p~------~~~~~l~~~~~~LkpgG~l~~s~~~~ 222 (272)
T 3a27_A 195 VH------KTHKFLDKTFEFLKDRGVIHYHETVA 222 (272)
T ss_dssp CS------SGGGGHHHHHHHEEEEEEEEEEEEEE
T ss_pred cc------cHHHHHHHHHHHcCCCCEEEEEEcCc
Confidence 64 25678999999999999999977654
No 243
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.33 E-value=4.3e-12 Score=128.45 Aligned_cols=106 Identities=22% Similarity=0.174 Sum_probs=86.9
Q ss_pred HHHcCCCCCCeEEEeccCchHHHHHHHHhc--CCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCc----cCC
Q 035870 622 IEKARVSKGQEVLEIGCGWGTLAIEIVKRT--GCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLA----KAN 695 (842)
Q Consensus 622 ~~~l~~~~~~~vLDiGcG~G~~~~~la~~~--~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~----~~~ 695 (842)
++.+.++++.+|||+|||+|.++..+++.. +.+|+|+|+|+.+++.++++++.. ++++++++|+.+.. ..+
T Consensus 66 l~~~~~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~---~~v~~~~~d~~~~~~~~~~~~ 142 (227)
T 1g8a_A 66 LKNFPIKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEER---RNIVPILGDATKPEEYRALVP 142 (227)
T ss_dssp CCCCCCCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSC---TTEEEEECCTTCGGGGTTTCC
T ss_pred HHhcCCCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhcc---CCCEEEEccCCCcchhhcccC
Confidence 344457889999999999999999999873 479999999999999999988654 48999999988732 246
Q ss_pred CccEEEEcchhhhcChhhHHHHHHHHHhccccCcEEEEE
Q 035870 696 KYDRIISCEMIEAVGHEFMEEFFGCCESLLAEDGLLVLQ 734 (842)
Q Consensus 696 ~fD~i~s~~~~~~~~~~~~~~~~~~~~~~LkpgG~~~~~ 734 (842)
+||+|++... .......+++++.++|||||++++.
T Consensus 143 ~~D~v~~~~~----~~~~~~~~l~~~~~~LkpgG~l~~~ 177 (227)
T 1g8a_A 143 KVDVIFEDVA----QPTQAKILIDNAEVYLKRGGYGMIA 177 (227)
T ss_dssp CEEEEEECCC----STTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CceEEEECCC----CHhHHHHHHHHHHHhcCCCCEEEEE
Confidence 8999998654 2222445699999999999999997
No 244
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.32 E-value=2.7e-12 Score=130.17 Aligned_cols=107 Identities=19% Similarity=0.196 Sum_probs=90.9
Q ss_pred CCCCeEEEeccCchHHHHHHHHhc--CCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCc-----cC--CCcc
Q 035870 628 SKGQEVLEIGCGWGTLAIEIVKRT--GCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLA-----KA--NKYD 698 (842)
Q Consensus 628 ~~~~~vLDiGcG~G~~~~~la~~~--~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~-----~~--~~fD 698 (842)
.++.+|||||||+|..+..+++.. +++|+++|+|+++++.|+++++..++.++++++++|+.+.. .+ ++||
T Consensus 71 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~~~~~~fD 150 (232)
T 3cbg_A 71 TGAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQGKPLPEFD 150 (232)
T ss_dssp HTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSSSCCCEE
T ss_pred cCCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCCcC
Confidence 456799999999999999999873 67999999999999999999999998778999999976532 12 7899
Q ss_pred EEEEcchhhhcChhhHHHHHHHHHhccccCcEEEEEeecCC
Q 035870 699 RIISCEMIEAVGHEFMEEFFGCCESLLAEDGLLVLQFISIP 739 (842)
Q Consensus 699 ~i~s~~~~~~~~~~~~~~~~~~~~~~LkpgG~~~~~~~~~~ 739 (842)
+|++... ...+..+++++.++|||||++++.++...
T Consensus 151 ~V~~d~~-----~~~~~~~l~~~~~~LkpgG~lv~~~~~~~ 186 (232)
T 3cbg_A 151 LIFIDAD-----KRNYPRYYEIGLNLLRRGGLMVIDNVLWH 186 (232)
T ss_dssp EEEECSC-----GGGHHHHHHHHHHTEEEEEEEEEECTTGG
T ss_pred EEEECCC-----HHHHHHHHHHHHHHcCCCeEEEEeCCCcC
Confidence 9998754 23478999999999999999999776543
No 245
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.31 E-value=3.6e-12 Score=129.19 Aligned_cols=107 Identities=15% Similarity=0.178 Sum_probs=91.3
Q ss_pred CCCCCeEEEeccCchHHHHHHHHh-c-CCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCc---c-C---CCc
Q 035870 627 VSKGQEVLEIGCGWGTLAIEIVKR-T-GCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLA---K-A---NKY 697 (842)
Q Consensus 627 ~~~~~~vLDiGcG~G~~~~~la~~-~-~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~---~-~---~~f 697 (842)
..++.+|||||||+|..+..+++. + +.+|+++|+|+++++.|+++++..++.++++++++|+.+.. . . ++|
T Consensus 67 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~~~~~~ 146 (229)
T 2avd_A 67 LIQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGTF 146 (229)
T ss_dssp HTTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCTTCE
T ss_pred hcCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcCCCCCc
Confidence 356789999999999999999987 3 68999999999999999999999998789999999986542 1 1 689
Q ss_pred cEEEEcchhhhcChhhHHHHHHHHHhccccCcEEEEEeecC
Q 035870 698 DRIISCEMIEAVGHEFMEEFFGCCESLLAEDGLLVLQFISI 738 (842)
Q Consensus 698 D~i~s~~~~~~~~~~~~~~~~~~~~~~LkpgG~~~~~~~~~ 738 (842)
|+|++... ...+..+++++.++|||||.+++.++..
T Consensus 147 D~v~~d~~-----~~~~~~~l~~~~~~L~pgG~lv~~~~~~ 182 (229)
T 2avd_A 147 DVAVVDAD-----KENCSAYYERCLQLLRPGGILAVLRVLW 182 (229)
T ss_dssp EEEEECSC-----STTHHHHHHHHHHHEEEEEEEEEECCSG
T ss_pred cEEEECCC-----HHHHHHHHHHHHHHcCCCeEEEEECCCc
Confidence 99999654 2347889999999999999999976543
No 246
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.31 E-value=2.9e-11 Score=120.41 Aligned_cols=103 Identities=13% Similarity=0.131 Sum_probs=86.8
Q ss_pred HcCCCCCCeEEEeccCchHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCccCCCccEEEEc
Q 035870 624 KARVSKGQEVLEIGCGWGTLAIEIVKRTGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLAKANKYDRIISC 703 (842)
Q Consensus 624 ~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~~~fD~i~s~ 703 (842)
.....++.+|||+|||+|.++..+++....+|+|+|+|+.+++.|+++++..++ +++++++|+.+++ ++||+|+++
T Consensus 44 ~~~~~~~~~vlD~g~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~--~~~D~v~~~ 119 (207)
T 1wy7_A 44 SLGDIEGKVVADLGAGTGVLSYGALLLGAKEVICVEVDKEAVDVLIENLGEFKG--KFKVFIGDVSEFN--SRVDIVIMN 119 (207)
T ss_dssp HTTSSTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHTGGGTT--SEEEEESCGGGCC--CCCSEEEEC
T ss_pred HcCCCCcCEEEEeeCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCC--CEEEEECchHHcC--CCCCEEEEc
Confidence 335567899999999999999999988335899999999999999999988877 7999999999986 689999999
Q ss_pred chhhhcChhhHHHHHHHHHhccccCcEEE
Q 035870 704 EMIEAVGHEFMEEFFGCCESLLAEDGLLV 732 (842)
Q Consensus 704 ~~~~~~~~~~~~~~~~~~~~~LkpgG~~~ 732 (842)
..+++........+++++.++| |+.++
T Consensus 120 ~p~~~~~~~~~~~~l~~~~~~l--~~~~~ 146 (207)
T 1wy7_A 120 PPFGSQRKHADRPFLLKAFEIS--DVVYS 146 (207)
T ss_dssp CCCSSSSTTTTHHHHHHHHHHC--SEEEE
T ss_pred CCCccccCCchHHHHHHHHHhc--CcEEE
Confidence 9887775444567889999988 55433
No 247
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.30 E-value=7.4e-12 Score=128.27 Aligned_cols=107 Identities=18% Similarity=0.331 Sum_probs=85.2
Q ss_pred CCCCCeEEEeccCchHHHHHHHHh-cCCEEEEEcCCHHHHHHHHHHHHHc--------CCCCCeEEEEccccC-Cc---c
Q 035870 627 VSKGQEVLEIGCGWGTLAIEIVKR-TGCKYTGITLSEEQLKYAEMKVKEA--------GLQDLIRLYLCDYRQ-LA---K 693 (842)
Q Consensus 627 ~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gid~s~~~~~~a~~~~~~~--------~l~~~v~~~~~d~~~-~~---~ 693 (842)
++++.+|||||||+|.++..+++. ++.+|+|+|+|+.+++.|+++++.+ ++. +++++++|+.+ ++ +
T Consensus 47 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~-nv~~~~~D~~~~l~~~~~ 125 (246)
T 2vdv_E 47 MTKKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQ-NINVLRGNAMKFLPNFFE 125 (246)
T ss_dssp BSCCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTT-TEEEEECCTTSCGGGTSC
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCC-cEEEEeccHHHHHHHhcc
Confidence 457789999999999999999988 4579999999999999999998876 664 89999999887 43 3
Q ss_pred CCCccEEEEcchhhhcChh------hHHHHHHHHHhccccCcEEEEE
Q 035870 694 ANKYDRIISCEMIEAVGHE------FMEEFFGCCESLLAEDGLLVLQ 734 (842)
Q Consensus 694 ~~~fD~i~s~~~~~~~~~~------~~~~~~~~~~~~LkpgG~~~~~ 734 (842)
.+++|.|+....-.+.... ....+++++.++|||||.+++.
T Consensus 126 ~~~~d~v~~~~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~ 172 (246)
T 2vdv_E 126 KGQLSKMFFCFPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTI 172 (246)
T ss_dssp TTCEEEEEEESCCCC------CSSCCCHHHHHHHHHHEEEEEEEEEE
T ss_pred ccccCEEEEECCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEE
Confidence 5789999865321111000 0158999999999999999984
No 248
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.29 E-value=5.4e-12 Score=122.10 Aligned_cols=122 Identities=20% Similarity=0.160 Sum_probs=94.6
Q ss_pred HcCCCCCCeEEEeccCchHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCcc----CCCccE
Q 035870 624 KARVSKGQEVLEIGCGWGTLAIEIVKRTGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLAK----ANKYDR 699 (842)
Q Consensus 624 ~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~----~~~fD~ 699 (842)
.+++++|.+|||||||. +++|+|++|++.|+++... +++++++|+.+++. +++||+
T Consensus 7 ~~g~~~g~~vL~~~~g~---------------v~vD~s~~ml~~a~~~~~~-----~~~~~~~d~~~~~~~~~~~~~fD~ 66 (176)
T 2ld4_A 7 DFGISAGQFVAVVWDKS---------------SPVEALKGLVDKLQALTGN-----EGRVSVENIKQLLQSAHKESSFDI 66 (176)
T ss_dssp TTTCCTTSEEEEEECTT---------------SCHHHHHHHHHHHHHHTTT-----TSEEEEEEGGGGGGGCCCSSCEEE
T ss_pred ccCCCCCCEEEEecCCc---------------eeeeCCHHHHHHHHHhccc-----CcEEEEechhcCccccCCCCCEeE
Confidence 45678999999999996 2399999999999988532 58999999988763 678999
Q ss_pred EEEcchhhhc-ChhhHHHHHHHHHhccccCcEEEEEeecCCCcccccccCccchhhhcccCCCCCCCHHHHHHHHhhcCC
Q 035870 700 IISCEMIEAV-GHEFMEEFFGCCESLLAEDGLLVLQFISIPDERYNEYRLSSDFIKEYIFPGGCLPSLSRITSAMSVASR 778 (842)
Q Consensus 700 i~s~~~~~~~-~~~~~~~~~~~~~~~LkpgG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~g 778 (842)
|+++.+++|+ .+ +..++++++++|||||++++........ .. .....+..++.+.+.+ +|
T Consensus 67 V~~~~~l~~~~~~--~~~~l~~~~r~LkpgG~l~~~~~~~~~~------~~----------~~~~~~~~~~~~~l~~-aG 127 (176)
T 2ld4_A 67 ILSGLVPGSTTLH--SAEILAEIARILRPGGCLFLKEPVETAV------DN----------NSKVKTASKLCSALTL-SG 127 (176)
T ss_dssp EEECCSTTCCCCC--CHHHHHHHHHHEEEEEEEEEEEEEESSS------CS----------SSSSCCHHHHHHHHHH-TT
T ss_pred EEECChhhhcccC--HHHHHHHHHHHCCCCEEEEEEccccccc------cc----------ccccCCHHHHHHHHHH-CC
Confidence 9999999999 55 6899999999999999999954321110 00 1122467888888887 89
Q ss_pred cEEEEEEe
Q 035870 779 LCVEQVEN 786 (842)
Q Consensus 779 f~v~~~~~ 786 (842)
| +. +..
T Consensus 128 f-i~-~~~ 133 (176)
T 2ld4_A 128 L-VE-VKE 133 (176)
T ss_dssp C-EE-EEE
T ss_pred C-cE-eec
Confidence 9 65 444
No 249
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=99.29 E-value=9.7e-12 Score=122.83 Aligned_cols=106 Identities=8% Similarity=0.124 Sum_probs=94.0
Q ss_pred CCCCeEEEeccCchHHHHHHHHh-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCccCCCccEEEEcchh
Q 035870 628 SKGQEVLEIGCGWGTLAIEIVKR-TGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLAKANKYDRIISCEMI 706 (842)
Q Consensus 628 ~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~~~fD~i~s~~~~ 706 (842)
.+..+|||||||||.++..++.. +..+|+++|+++.+++.+++++..+|+. .++.+.|+..-++.++||+|+++-++
T Consensus 131 ~~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~g~~--~~~~v~D~~~~~p~~~~DvaL~lkti 208 (281)
T 3lcv_B 131 PRPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRLNVP--HRTNVADLLEDRLDEPADVTLLLKTL 208 (281)
T ss_dssp CCCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHTTCC--EEEEECCTTTSCCCSCCSEEEETTCH
T ss_pred CCCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhcCCC--ceEEEeeecccCCCCCcchHHHHHHH
Confidence 44679999999999999999887 7789999999999999999999999874 78999998887777899999999999
Q ss_pred hhcChhhHHHHHHHHHhccccCcEEEEEee
Q 035870 707 EAVGHEFMEEFFGCCESLLAEDGLLVLQFI 736 (842)
Q Consensus 707 ~~~~~~~~~~~~~~~~~~LkpgG~~~~~~~ 736 (842)
+|+.++.....+ ++.+.|+|+|.++....
T Consensus 209 ~~Le~q~kg~g~-~ll~aL~~~~vvVSfp~ 237 (281)
T 3lcv_B 209 PCLETQQRGSGW-EVIDIVNSPNIVVTFPT 237 (281)
T ss_dssp HHHHHHSTTHHH-HHHHHSSCSEEEEEEEC
T ss_pred HHhhhhhhHHHH-HHHHHhCCCCEEEeccc
Confidence 999876666777 89999999999887544
No 250
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.29 E-value=2.4e-11 Score=132.11 Aligned_cols=152 Identities=26% Similarity=0.259 Sum_probs=108.0
Q ss_pred hhhhhhhcCChHHHHhccCCC---Cccccccc-CCCcccHHHHHHHHHHHHHHHcCCCCCCeEEEeccCchHHHHHHHHh
Q 035870 575 RNISRHYDLSNELFSLFLDES---MTYSCAVF-KSEDEDLKAAQMRKVSLLIEKARVSKGQEVLEIGCGWGTLAIEIVKR 650 (842)
Q Consensus 575 ~~i~~~Yd~~~~~~~~~l~~~---~~ys~~~~-~~~~~~l~~aq~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~la~~ 650 (842)
.++.-+++..++.+..++|.+ ..+..+|- .....++.+. ....++... .+++.+|||+|||+|.+++.+++.
T Consensus 163 p~~~i~~~~~~d~~~~~ld~~g~~~l~~rgyr~~~~~a~l~~~---la~~l~~~~-~~~~~~vLD~gCGsG~~~i~~a~~ 238 (373)
T 3tm4_A 163 PAVIFRAELIKDVFFLGIDTTGDSSLHKRPWRVYDHPAHLKAS---IANAMIELA-ELDGGSVLDPMCGSGTILIELALR 238 (373)
T ss_dssp CSEEEEEEEETTEEEEEEESSCSSCTTCCTTCCSCCTTCCCHH---HHHHHHHHH-TCCSCCEEETTCTTCHHHHHHHHT
T ss_pred CCeEEEEEEECCEEEEEEEccCCcccccCCcccccCCCCccHH---HHHHHHHhh-cCCCCEEEEccCcCcHHHHHHHHh
Confidence 345556666777777777643 12223321 1112223332 223445555 778999999999999999999988
Q ss_pred cCC--EEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCc-cCCCccEEEEcchhhhcC------hhhHHHHHHHH
Q 035870 651 TGC--KYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLA-KANKYDRIISCEMIEAVG------HEFMEEFFGCC 721 (842)
Q Consensus 651 ~~~--~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~-~~~~fD~i~s~~~~~~~~------~~~~~~~~~~~ 721 (842)
+. +|+|+|+|+.+++.|+++++.+|+.++++++++|+.+++ ++++||+|+++..+..-. .+.+..+++++
T Consensus 239 -~~~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~~~~~~~~fD~Ii~npPyg~r~~~~~~~~~ly~~~~~~l 317 (373)
T 3tm4_A 239 -RYSGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQLSQYVDSVDFAISNLPYGLKIGKKSMIPDLYMKFFNEL 317 (373)
T ss_dssp -TCCSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGGGGGTCSCEEEEEEECCCC------CCHHHHHHHHHHHH
T ss_pred -CCCCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhhCCcccCCcCEEEECCCCCcccCcchhHHHHHHHHHHHH
Confidence 44 999999999999999999999999778999999999988 568999999987643221 11247888999
Q ss_pred HhccccCcEEEE
Q 035870 722 ESLLAEDGLLVL 733 (842)
Q Consensus 722 ~~~LkpgG~~~~ 733 (842)
+++| +|.+++
T Consensus 318 ~r~l--~g~~~~ 327 (373)
T 3tm4_A 318 AKVL--EKRGVF 327 (373)
T ss_dssp HHHE--EEEEEE
T ss_pred HHHc--CCeEEE
Confidence 9988 444444
No 251
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.29 E-value=2.3e-12 Score=130.81 Aligned_cols=97 Identities=14% Similarity=0.133 Sum_probs=81.0
Q ss_pred CCCeEEEeccCchHHHHHHHHh-----cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCC---c--cCCCcc
Q 035870 629 KGQEVLEIGCGWGTLAIEIVKR-----TGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQL---A--KANKYD 698 (842)
Q Consensus 629 ~~~~vLDiGcG~G~~~~~la~~-----~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~---~--~~~~fD 698 (842)
++.+|||||||+|..+..+++. ++++|+|+|+|+++++.|+ ++.++|+++++|..+. + .+.+||
T Consensus 81 ~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~------~~~~~v~~~~gD~~~~~~l~~~~~~~fD 154 (236)
T 2bm8_A 81 RPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPA------SDMENITLHQGDCSDLTTFEHLREMAHP 154 (236)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCG------GGCTTEEEEECCSSCSGGGGGGSSSCSS
T ss_pred CCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHh------ccCCceEEEECcchhHHHHHhhccCCCC
Confidence 5679999999999999999986 4789999999999999887 2235899999999885 4 234799
Q ss_pred EEEEcchhhhcChhhHHHHHHHHHh-ccccCcEEEEEee
Q 035870 699 RIISCEMIEAVGHEFMEEFFGCCES-LLAEDGLLVLQFI 736 (842)
Q Consensus 699 ~i~s~~~~~~~~~~~~~~~~~~~~~-~LkpgG~~~~~~~ 736 (842)
+|++... |. .+..+++++.+ +|||||++++.++
T Consensus 155 ~I~~d~~--~~---~~~~~l~~~~r~~LkpGG~lv~~d~ 188 (236)
T 2bm8_A 155 LIFIDNA--HA---NTFNIMKWAVDHLLEEGDYFIIEDM 188 (236)
T ss_dssp EEEEESS--CS---SHHHHHHHHHHHTCCTTCEEEECSC
T ss_pred EEEECCc--hH---hHHHHHHHHHHhhCCCCCEEEEEeC
Confidence 9998665 32 37889999997 9999999999664
No 252
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.28 E-value=6.2e-12 Score=131.33 Aligned_cols=109 Identities=19% Similarity=0.250 Sum_probs=84.1
Q ss_pred CCCCeEEEeccCchHHHHHHHHh-cCCEEEEEcCCHHHHHHHHHHHHHcC---C-CCCeEEEEccccCCc--cCCCccEE
Q 035870 628 SKGQEVLEIGCGWGTLAIEIVKR-TGCKYTGITLSEEQLKYAEMKVKEAG---L-QDLIRLYLCDYRQLA--KANKYDRI 700 (842)
Q Consensus 628 ~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gid~s~~~~~~a~~~~~~~~---l-~~~v~~~~~d~~~~~--~~~~fD~i 700 (842)
+++.+|||||||+|..+..+++. +..+|+++|+|+++++.|++++...+ + ..+++++++|..+.. .+++||+|
T Consensus 82 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDvI 161 (294)
T 3adn_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVI 161 (294)
T ss_dssp TTCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEEE
T ss_pred CCCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccEE
Confidence 45679999999999999999988 45789999999999999999987542 2 348999999987764 45789999
Q ss_pred EEcchhhhcChhhH--HHHHHHHHhccccCcEEEEEee
Q 035870 701 ISCEMIEAVGHEFM--EEFFGCCESLLAEDGLLVLQFI 736 (842)
Q Consensus 701 ~s~~~~~~~~~~~~--~~~~~~~~~~LkpgG~~~~~~~ 736 (842)
++...-...+...+ .++++.++++|||||+++++..
T Consensus 162 i~D~~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~ 199 (294)
T 3adn_A 162 ISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNG 199 (294)
T ss_dssp EECC----------CCHHHHHHHHHTEEEEEEEEEEEE
T ss_pred EECCCCccCcchhccHHHHHHHHHHhcCCCCEEEEecC
Confidence 99655433222222 7899999999999999999764
No 253
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=99.28 E-value=4.3e-12 Score=142.63 Aligned_cols=193 Identities=15% Similarity=0.109 Sum_probs=106.4
Q ss_pred hhHHHHHHHHHhhhcCceEEeCCCeeEEEe---------------CCCcE-EEEeCCCcEE--eCCEEEEccChHHHHHh
Q 035870 214 SHSYVNKVRKQLESWGCQIRTSSEVCSVLP---------------ADKGC-TIVCGDGSRE--FYNSCVMALHAPDALKI 275 (842)
Q Consensus 214 ~~~l~~~L~~~l~~~G~~i~~~~~V~~I~~---------------~~~~v-~V~~~~G~~~--~ad~VV~A~p~~~~~~l 275 (842)
...+++.|.+.++++|++|+.+++|++|.. +++++ .|.+.+| ++ .||.||+|+..+.. ++
T Consensus 180 ~~~l~~~L~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~v~~V~t~~g-~i~~~Ad~VV~AtG~~s~-~l 257 (448)
T 3axb_A 180 AEKVVDYYYRRASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQEARASAAVLSDG-TRVEVGEKLVVAAGVWSN-RL 257 (448)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTSCEEEEEEEETTS-CEEEEEEEEEECCGGGHH-HH
T ss_pred HHHHHHHHHHHHHhCCCEEEcCCeEEEEEecccccccccccccccCCCceEEEEeCCC-EEeecCCEEEECCCcCHH-HH
Confidence 458999999999999999999999999998 56665 7888888 68 99999999988743 33
Q ss_pred hcCCCChHHHHhccccceeece-EEEecCCCC--cCC----------C--CCCcc-eeeecc-cCC-CceEEEEEccc--
Q 035870 276 LGNQATFDETRILGAFQYVYSD-IFLHRDKRF--MPQ----------N--PAAWS-AWNFLE-SFD-SKVCLTYWLNV-- 335 (842)
Q Consensus 276 l~~~~~~~~~~~l~~~~~~~~~-v~l~~~~~~--~p~----------~--~~~~~-~~~~~~-~~~-~~~~v~~~~~~-- 335 (842)
++. .. ..++..+.+ .++.++..- ++. . ...+. ...|.. .++ +...+......
T Consensus 258 ~~~-~g-------~~~~~~p~rg~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~y~~p~~~~g~~~iG~~~~~~~ 329 (448)
T 3axb_A 258 LNP-LG-------IDTFSRPKKRMVFRVSASTEGLRRIMREGDLAGAGAPPLIILPKRVLVRPAPREGSFWVQLSDNLGR 329 (448)
T ss_dssp HGG-GT-------CCCSEEEEEEEEEEEECCSHHHHHHHHHCCTTSSSSCCEEEETTTEEEEEETTTTEEEEEECCCTTS
T ss_pred HHH-cC-------CCCcccccceEEEEeCCcccccccccccccccccCCCceEEcCCceEEeecCCCCeEEEecCCcccC
Confidence 332 00 011222211 111121110 000 0 00000 011111 123 34444332210
Q ss_pred ccCCCC-----------CCCCeEEecCCCCCCcceeEEEEcCCCCCCHHHHHHHHhhhhhcCCCCeEEeccccCCCCCch
Q 035870 336 LQNLGE-----------TSLPFLVTLNPDHVPEHTLLKWSTGHPVPSVAASKASLELDHIQGKRGIWFCGAYQGYGFHED 404 (842)
Q Consensus 336 l~~l~~-----------~~~~~~~~l~~~~~~~~~~~~w~~~~p~~~~~~~~~~~~~~~~~~~~~l~~aG~~~g~G~~e~ 404 (842)
...... .+.+.+..+.|......+...|...+|..++ +..+.+.... +|||++.++.+.|+ ..
T Consensus 330 ~~~~~~~~~~~~~~~~~~l~~~~~~~~P~l~~~~~~~~w~G~r~~~t~---d~~p~ig~~~--~~l~~a~G~~g~G~-~~ 403 (448)
T 3axb_A 330 PFALEEDPQPEEHYYSLAILPILSLYLPQFQDAYPSGGWAGHYDISFD---ANPVVFEPWE--SGIVVAAGTSGSGI-MK 403 (448)
T ss_dssp CBCCCSSCCCCHHHHHHHTHHHHHHHCGGGTTCCCSEEEEEEEEEETT---SSCEEECGGG--CSEEEEECCTTCCG-GG
T ss_pred CcccccccCCChHHHHHHHHHHHHHhCcCcccCCcccceEEEeccccC---CCCcEeeecC--CCEEEEECCCchhH-hH
Confidence 000000 0111122233332333455667554443111 1222333332 79999999999999 89
Q ss_pred hHhHHHHHHHHhcCCccc
Q 035870 405 GLKAGMTAAHGVLGKSCT 422 (842)
Q Consensus 405 A~~SG~~aA~~Il~~~~~ 422 (842)
|...|+.+|+.|++...+
T Consensus 404 ap~~g~~la~~i~~~~~~ 421 (448)
T 3axb_A 404 SDSIGRVAAAVALGMESV 421 (448)
T ss_dssp HHHHHHHHHHHHTTCSEE
T ss_pred hHHHHHHHHHHHcCCCcc
Confidence 999999999999987644
No 254
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.28 E-value=1.3e-11 Score=132.84 Aligned_cols=113 Identities=15% Similarity=0.248 Sum_probs=90.5
Q ss_pred HHHHHHHcCCCCCCeEEEeccCchHHHHHHHHhcC--CEEEEEcCCHHHHHHHHHHHHHcC----------CCCCeEEEE
Q 035870 618 VSLLIEKARVSKGQEVLEIGCGWGTLAIEIVKRTG--CKYTGITLSEEQLKYAEMKVKEAG----------LQDLIRLYL 685 (842)
Q Consensus 618 ~~~l~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~--~~v~gid~s~~~~~~a~~~~~~~~----------l~~~v~~~~ 685 (842)
...++..+.+.++.+|||+|||+|.++..+++..+ .+|+++|+|+.+++.|++++...+ +.+++++++
T Consensus 94 ~~~~l~~l~~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~ 173 (336)
T 2b25_A 94 INMILSMMDINPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIH 173 (336)
T ss_dssp HHHHHHHHTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEE
T ss_pred HHHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEE
Confidence 34567777889999999999999999999998733 799999999999999999988632 335899999
Q ss_pred ccccCCc---cCCCccEEEEcchhhhcChhhHHHHHHHHHhccccCcEEEEEeec
Q 035870 686 CDYRQLA---KANKYDRIISCEMIEAVGHEFMEEFFGCCESLLAEDGLLVLQFIS 737 (842)
Q Consensus 686 ~d~~~~~---~~~~fD~i~s~~~~~~~~~~~~~~~~~~~~~~LkpgG~~~~~~~~ 737 (842)
+|+.+.. ++++||+|++... . +..+++++.++|||||++++....
T Consensus 174 ~d~~~~~~~~~~~~fD~V~~~~~-----~--~~~~l~~~~~~LkpgG~lv~~~~~ 221 (336)
T 2b25_A 174 KDISGATEDIKSLTFDAVALDML-----N--PHVTLPVFYPHLKHGGVCAVYVVN 221 (336)
T ss_dssp SCTTCCC-------EEEEEECSS-----S--TTTTHHHHGGGEEEEEEEEEEESS
T ss_pred CChHHcccccCCCCeeEEEECCC-----C--HHHHHHHHHHhcCCCcEEEEEeCC
Confidence 9998863 4568999998532 2 234789999999999999986543
No 255
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.27 E-value=5.8e-13 Score=134.33 Aligned_cols=152 Identities=11% Similarity=0.160 Sum_probs=96.4
Q ss_pred HHHHHHHHHcCCC-CCCeEEEeccCchHHHHHHHHhcC-CEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEE-EccccCCc
Q 035870 616 RKVSLLIEKARVS-KGQEVLEIGCGWGTLAIEIVKRTG-CKYTGITLSEEQLKYAEMKVKEAGLQDLIRLY-LCDYRQLA 692 (842)
Q Consensus 616 ~~~~~l~~~l~~~-~~~~vLDiGcG~G~~~~~la~~~~-~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~-~~d~~~~~ 692 (842)
.|+..+++.+.+. ++.+|||||||+|.++..+++. + .+|+|+|+|++|++.|+++.. ++... ..+++.+.
T Consensus 23 ~kL~~~L~~~~~~~~g~~VLDiGcGtG~~t~~la~~-g~~~V~gvDis~~ml~~a~~~~~------~~~~~~~~~~~~~~ 95 (232)
T 3opn_A 23 LKLEKALKEFHLEINGKTCLDIGSSTGGFTDVMLQN-GAKLVYALDVGTNQLAWKIRSDE------RVVVMEQFNFRNAV 95 (232)
T ss_dssp HHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHT-TCSEEEEECSSCCCCCHHHHTCT------TEEEECSCCGGGCC
T ss_pred HHHHHHHHHcCCCCCCCEEEEEccCCCHHHHHHHhc-CCCEEEEEcCCHHHHHHHHHhCc------cccccccceEEEeC
Confidence 3566777777764 5679999999999999999998 5 599999999999999876532 22211 12222221
Q ss_pred ----cCCCccEEEEcchhhhcChhhHHHHHHHHHhccccCcEEEEEeecCCCcccccccCccchhhh-ccc--CCCCCCC
Q 035870 693 ----KANKYDRIISCEMIEAVGHEFMEEFFGCCESLLAEDGLLVLQFISIPDERYNEYRLSSDFIKE-YIF--PGGCLPS 765 (842)
Q Consensus 693 ----~~~~fD~i~s~~~~~~~~~~~~~~~~~~~~~~LkpgG~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~--p~~~~~~ 765 (842)
+...||.+.+..++.++ ..++++++++|||||++++.. .| .++.. ...+.+ -+. |..+..+
T Consensus 96 ~~~~~~~~~d~~~~D~v~~~l-----~~~l~~i~rvLkpgG~lv~~~--~p--~~e~~---~~~~~~~G~~~d~~~~~~~ 163 (232)
T 3opn_A 96 LADFEQGRPSFTSIDVSFISL-----DLILPPLYEILEKNGEVAALI--KP--QFEAG---REQVGKNGIIRDPKVHQMT 163 (232)
T ss_dssp GGGCCSCCCSEEEECCSSSCG-----GGTHHHHHHHSCTTCEEEEEE--CH--HHHSC---HHHHC-CCCCCCHHHHHHH
T ss_pred HhHcCcCCCCEEEEEEEhhhH-----HHHHHHHHHhccCCCEEEEEE--Cc--ccccC---HHHhCcCCeecCcchhHHH
Confidence 11135666555555443 678999999999999999843 11 11110 000000 000 0011126
Q ss_pred HHHHHHHHhhcCCcEEEEEEec
Q 035870 766 LSRITSAMSVASRLCVEQVENI 787 (842)
Q Consensus 766 ~~~~~~~~~~~~gf~v~~~~~~ 787 (842)
..++.+.+.+ +||++..+...
T Consensus 164 ~~~l~~~l~~-aGf~v~~~~~~ 184 (232)
T 3opn_A 164 IEKVLKTATQ-LGFSVKGLTFS 184 (232)
T ss_dssp HHHHHHHHHH-HTEEEEEEEEC
T ss_pred HHHHHHHHHH-CCCEEEEEEEc
Confidence 6788777776 89999887653
No 256
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.27 E-value=2.1e-11 Score=134.29 Aligned_cols=119 Identities=14% Similarity=0.157 Sum_probs=97.4
Q ss_pred HHHHHcCCCCCCeEEEeccCchHHHHHHHHhc--CCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCc--cCC
Q 035870 620 LLIEKARVSKGQEVLEIGCGWGTLAIEIVKRT--GCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLA--KAN 695 (842)
Q Consensus 620 ~l~~~l~~~~~~~vLDiGcG~G~~~~~la~~~--~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~--~~~ 695 (842)
.+...+.++++.+|||+|||+|+.+.++|+.. ..+|+++|+|+.+++.++++++..|+. +.++++|..+++ ..+
T Consensus 92 l~a~~L~~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~--v~~~~~Da~~l~~~~~~ 169 (464)
T 3m6w_A 92 AVGVLLDPKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAP--LAVTQAPPRALAEAFGT 169 (464)
T ss_dssp HHHHHHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCC--CEEECSCHHHHHHHHCS
T ss_pred HHHHhcCcCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCe--EEEEECCHHHhhhhccc
Confidence 34456678899999999999999999999872 369999999999999999999999986 999999988876 357
Q ss_pred CccEEEEc------chhhhcChh--------------hHHHHHHHHHhccccCcEEEEEeecCCC
Q 035870 696 KYDRIISC------EMIEAVGHE--------------FMEEFFGCCESLLAEDGLLVLQFISIPD 740 (842)
Q Consensus 696 ~fD~i~s~------~~~~~~~~~--------------~~~~~~~~~~~~LkpgG~~~~~~~~~~~ 740 (842)
+||+|++. +++.+-++. ....+++++.++|||||++++.+++...
T Consensus 170 ~FD~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs~~~ 234 (464)
T 3m6w_A 170 YFHRVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCTFAP 234 (464)
T ss_dssp CEEEEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCCG
T ss_pred cCCEEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeccCch
Confidence 89999973 333332221 1378899999999999999998877543
No 257
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.27 E-value=4.4e-11 Score=133.38 Aligned_cols=119 Identities=15% Similarity=0.171 Sum_probs=98.2
Q ss_pred HHHHHcCCCCCCeEEEeccCchHHHHHHHHh-cC-CEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCc---cC
Q 035870 620 LLIEKARVSKGQEVLEIGCGWGTLAIEIVKR-TG-CKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLA---KA 694 (842)
Q Consensus 620 ~l~~~l~~~~~~~vLDiGcG~G~~~~~la~~-~~-~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~---~~ 694 (842)
.+...+.++++.+|||+|||+|..+.++++. .+ .+|+++|+|+.+++.++++++..|+. +++++++|+.+++ ++
T Consensus 250 l~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~~-~v~~~~~D~~~~~~~~~~ 328 (450)
T 2yxl_A 250 VASIVLDPKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIK-IVKPLVKDARKAPEIIGE 328 (450)
T ss_dssp HHHHHHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTCC-SEEEECSCTTCCSSSSCS
T ss_pred HHHHhcCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCC-cEEEEEcChhhcchhhcc
Confidence 3455667889999999999999999999987 34 79999999999999999999999986 7999999998876 22
Q ss_pred CCccEEEEc------chhhhcChhh--------------HHHHHHHHHhccccCcEEEEEeecCC
Q 035870 695 NKYDRIISC------EMIEAVGHEF--------------MEEFFGCCESLLAEDGLLVLQFISIP 739 (842)
Q Consensus 695 ~~fD~i~s~------~~~~~~~~~~--------------~~~~~~~~~~~LkpgG~~~~~~~~~~ 739 (842)
++||+|++. +++.+.++.. ...+++++.++|||||++++.+++..
T Consensus 329 ~~fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~~ 393 (450)
T 2yxl_A 329 EVADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSIF 393 (450)
T ss_dssp SCEEEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCC
T ss_pred CCCCEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCC
Confidence 689999973 3444443311 16789999999999999999887654
No 258
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.27 E-value=1.5e-11 Score=121.85 Aligned_cols=109 Identities=20% Similarity=0.244 Sum_probs=84.0
Q ss_pred HHHHHHHHcC-CCCCCeEEEeccCchHHHHHHHHhc---CCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCc
Q 035870 617 KVSLLIEKAR-VSKGQEVLEIGCGWGTLAIEIVKRT---GCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLA 692 (842)
Q Consensus 617 ~~~~l~~~l~-~~~~~~vLDiGcG~G~~~~~la~~~---~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~ 692 (842)
++..+.+... ++++.+|||||||+|.++..++++. +++|+|+|+|+.+ .. .+++++++|+.+.+
T Consensus 9 kl~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~-----------~~-~~v~~~~~d~~~~~ 76 (201)
T 2plw_A 9 KLIELDNKYLFLKKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD-----------PI-PNVYFIQGEIGKDN 76 (201)
T ss_dssp HHHHHHHHHCCCCTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC-----------CC-TTCEEEECCTTTTS
T ss_pred HHHHHHHHcCCCCCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC-----------CC-CCceEEEccccchh
Confidence 4455666655 5788999999999999999999883 5799999999831 12 37899999987764
Q ss_pred --------------------------cCCCccEEEEcchhhhcChhh---------HHHHHHHHHhccccCcEEEEEeec
Q 035870 693 --------------------------KANKYDRIISCEMIEAVGHEF---------MEEFFGCCESLLAEDGLLVLQFIS 737 (842)
Q Consensus 693 --------------------------~~~~fD~i~s~~~~~~~~~~~---------~~~~~~~~~~~LkpgG~~~~~~~~ 737 (842)
++++||+|+++.++++.+... ...+++++.++|||||.+++..+.
T Consensus 77 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~ 156 (201)
T 2plw_A 77 MNNIKNINYIDNMNNNSVDYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMYL 156 (201)
T ss_dssp SCCC-----------CHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred hhhhccccccccccchhhHHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEeC
Confidence 346899999988776643211 124789999999999999986543
No 259
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.26 E-value=2e-11 Score=134.37 Aligned_cols=120 Identities=13% Similarity=0.160 Sum_probs=98.0
Q ss_pred HHHHHcCCCCCCeEEEeccCchHHHHHHHHh-c-CCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCc--cCC
Q 035870 620 LLIEKARVSKGQEVLEIGCGWGTLAIEIVKR-T-GCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLA--KAN 695 (842)
Q Consensus 620 ~l~~~l~~~~~~~vLDiGcG~G~~~~~la~~-~-~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~--~~~ 695 (842)
.+...+.++++++|||+|||+|+.+.++|+. . ..+|+++|+|+.+++.++++++..|+. ++.++++|..++. .++
T Consensus 96 l~~~~L~~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~-nv~v~~~Da~~l~~~~~~ 174 (456)
T 3m4x_A 96 IVGTAAAAKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVS-NAIVTNHAPAELVPHFSG 174 (456)
T ss_dssp HHHHHHCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCS-SEEEECCCHHHHHHHHTT
T ss_pred HHHHHcCCCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCC-ceEEEeCCHHHhhhhccc
Confidence 3445667889999999999999999999987 2 369999999999999999999999986 7999999988875 457
Q ss_pred CccEEEEcc------hhhhcCh--------------hhHHHHHHHHHhccccCcEEEEEeecCCC
Q 035870 696 KYDRIISCE------MIEAVGH--------------EFMEEFFGCCESLLAEDGLLVLQFISIPD 740 (842)
Q Consensus 696 ~fD~i~s~~------~~~~~~~--------------~~~~~~~~~~~~~LkpgG~~~~~~~~~~~ 740 (842)
+||+|++.. ++.+-++ +....+++++.++|||||+++.++++...
T Consensus 175 ~FD~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs~~~ 239 (456)
T 3m4x_A 175 FFDRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCTFAP 239 (456)
T ss_dssp CEEEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCCCG
T ss_pred cCCEEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEeeccc
Confidence 999999853 2222111 11347899999999999999998887654
No 260
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.26 E-value=1.5e-11 Score=128.10 Aligned_cols=107 Identities=21% Similarity=0.210 Sum_probs=85.9
Q ss_pred CeEEEeccCchHHHHHHHHh-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCc---cCCCccEEEEcchh
Q 035870 631 QEVLEIGCGWGTLAIEIVKR-TGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLA---KANKYDRIISCEMI 706 (842)
Q Consensus 631 ~~vLDiGcG~G~~~~~la~~-~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~---~~~~fD~i~s~~~~ 706 (842)
.+|||||||+|.++..+++. ++.+|+++|+|+++++.|++++.... .++++++++|..+.. ++++||+|++....
T Consensus 91 ~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~~-~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~~ 169 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIPR-APRVKIRVDDARMVAESFTPASRDVIIRDVFA 169 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCCC-TTTEEEEESCHHHHHHTCCTTCEEEEEECCST
T ss_pred CEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccccC-CCceEEEECcHHHHHhhccCCCCCEEEECCCC
Confidence 49999999999999999995 68899999999999999999875432 348999999987753 35789999996433
Q ss_pred hhcChhh--HHHHHHHHHhccccCcEEEEEeecC
Q 035870 707 EAVGHEF--MEEFFGCCESLLAEDGLLVLQFISI 738 (842)
Q Consensus 707 ~~~~~~~--~~~~~~~~~~~LkpgG~~~~~~~~~ 738 (842)
....... ..+++++++++|||||+++++....
T Consensus 170 ~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~~~~ 203 (317)
T 3gjy_A 170 GAITPQNFTTVEFFEHCHRGLAPGGLYVANCGDH 203 (317)
T ss_dssp TSCCCGGGSBHHHHHHHHHHEEEEEEEEEEEEEC
T ss_pred ccccchhhhHHHHHHHHHHhcCCCcEEEEEecCC
Confidence 2211111 2789999999999999999987643
No 261
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.26 E-value=2.6e-11 Score=133.74 Aligned_cols=62 Identities=15% Similarity=0.172 Sum_probs=54.5
Q ss_pred EecCChhHHHHHHHHHhhhcCceEEeCCCeeEEEeCCCcEEEEeCCCcEEeCCEEEEccChHH
Q 035870 209 TVRWRSHSYVNKVRKQLESWGCQIRTSSEVCSVLPADKGCTIVCGDGSREFYNSCVMALHAPD 271 (842)
Q Consensus 209 ~~~gG~~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VV~A~p~~~ 271 (842)
++......+.+.|.+.+++.|++|+++++|++|..+++++.|++.+| ++.||.||+|+....
T Consensus 126 ~~~~~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~~~~~V~~~~g-~i~ad~VIlAtG~~S 187 (417)
T 3v76_A 126 FCDHSAKDIIRMLMAEMKEAGVQLRLETSIGEVERTASGFRVTTSAG-TVDAASLVVASGGKS 187 (417)
T ss_dssp EESSCHHHHHHHHHHHHHHHTCEEECSCCEEEEEEETTEEEEEETTE-EEEESEEEECCCCSS
T ss_pred eeCCCHHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCEEEEEECCc-EEEeeEEEECCCCcc
Confidence 34555678999999999999999999999999999988999999988 899999999987653
No 262
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.26 E-value=9.2e-12 Score=120.56 Aligned_cols=110 Identities=16% Similarity=0.202 Sum_probs=88.3
Q ss_pred HHHHHHHHcC-CCCCCeEEEeccCchHHHHHHHHhc--CCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCc-
Q 035870 617 KVSLLIEKAR-VSKGQEVLEIGCGWGTLAIEIVKRT--GCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLA- 692 (842)
Q Consensus 617 ~~~~l~~~l~-~~~~~~vLDiGcG~G~~~~~la~~~--~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~- 692 (842)
++..+++.+. ++++.+|||+|||+|.++..+++.. +.+++++|+|+ +++. .+++++++|+.+.+
T Consensus 9 ~l~~~~~~~~~~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~-----------~~~~~~~~d~~~~~~ 76 (180)
T 1ej0_A 9 KLDEIQQSDKLFKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI-----------VGVDFLQGDFRDELV 76 (180)
T ss_dssp HHHHHHHHHCCCCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC-----------TTEEEEESCTTSHHH
T ss_pred HHHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc-----------CcEEEEEcccccchh
Confidence 3445666655 6788999999999999999999883 58999999999 6532 37999999998763
Q ss_pred --------cCCCccEEEEcchhhhcChhh---------HHHHHHHHHhccccCcEEEEEeecC
Q 035870 693 --------KANKYDRIISCEMIEAVGHEF---------MEEFFGCCESLLAEDGLLVLQFISI 738 (842)
Q Consensus 693 --------~~~~fD~i~s~~~~~~~~~~~---------~~~~~~~~~~~LkpgG~~~~~~~~~ 738 (842)
++++||+|+++.++++.+... ...+++++.++|||||.+++.....
T Consensus 77 ~~~~~~~~~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 139 (180)
T 1ej0_A 77 MKALLERVGDSKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQG 139 (180)
T ss_dssp HHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESS
T ss_pred hhhhhccCCCCceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecC
Confidence 347899999998887776421 1688999999999999999976543
No 263
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.25 E-value=1.5e-11 Score=127.94 Aligned_cols=96 Identities=18% Similarity=0.215 Sum_probs=83.3
Q ss_pred CCCCeEEEeccCchHHHHHHHHh-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCc-cCCCccEEEEcch
Q 035870 628 SKGQEVLEIGCGWGTLAIEIVKR-TGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLA-KANKYDRIISCEM 705 (842)
Q Consensus 628 ~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~-~~~~fD~i~s~~~ 705 (842)
.++.+|||||||+|.++..+++. ++.+|+|+|+|+.+++.|+++. .++.+..+|+.+++ ++++||+|+++.+
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~------~~~~~~~~d~~~~~~~~~~fD~v~~~~~ 157 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRY------PQVTFCVASSHRLPFSDTSMDAIIRIYA 157 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHC------TTSEEEECCTTSCSBCTTCEEEEEEESC
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhC------CCcEEEEcchhhCCCCCCceeEEEEeCC
Confidence 57889999999999999999987 4789999999999999998874 26899999999887 6689999999765
Q ss_pred hhhcChhhHHHHHHHHHhccccCcEEEEEeecC
Q 035870 706 IEAVGHEFMEEFFGCCESLLAEDGLLVLQFISI 738 (842)
Q Consensus 706 ~~~~~~~~~~~~~~~~~~~LkpgG~~~~~~~~~ 738 (842)
. ..++++.++|||||++++.+...
T Consensus 158 ~---------~~l~~~~~~L~pgG~l~~~~~~~ 181 (269)
T 1p91_A 158 P---------CKAEELARVVKPGGWVITATPGP 181 (269)
T ss_dssp C---------CCHHHHHHHEEEEEEEEEEEECT
T ss_pred h---------hhHHHHHHhcCCCcEEEEEEcCH
Confidence 2 34788999999999999977654
No 264
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.25 E-value=2.4e-11 Score=132.53 Aligned_cols=111 Identities=15% Similarity=0.103 Sum_probs=90.9
Q ss_pred CCCCeEEEeccCchHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHHcCCCC-CeEEEEccccCCc-----cCCCccEEE
Q 035870 628 SKGQEVLEIGCGWGTLAIEIVKRTGCKYTGITLSEEQLKYAEMKVKEAGLQD-LIRLYLCDYRQLA-----KANKYDRII 701 (842)
Q Consensus 628 ~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~~l~~-~v~~~~~d~~~~~-----~~~~fD~i~ 701 (842)
.++.+|||+|||+|.+++.+|+....+|+++|+|+.+++.|+++++.+++.+ +++++++|+.+.. ...+||+|+
T Consensus 211 ~~~~~VLDl~cGtG~~sl~la~~ga~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~~~~~~fD~Ii 290 (385)
T 2b78_A 211 AAGKTVLNLFSYTAAFSVAAAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLTYDIII 290 (385)
T ss_dssp TBTCEEEEETCTTTHHHHHHHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred cCCCeEEEEeeccCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHHhCCCccEEE
Confidence 5788999999999999999998733489999999999999999999999976 8999999987642 245899999
Q ss_pred Ecchhh-----hcCh--hhHHHHHHHHHhccccCcEEEEEeecC
Q 035870 702 SCEMIE-----AVGH--EFMEEFFGCCESLLAEDGLLVLQFISI 738 (842)
Q Consensus 702 s~~~~~-----~~~~--~~~~~~~~~~~~~LkpgG~~~~~~~~~ 738 (842)
+..... +..+ +.+..+++.+.++|+|||.+++.+...
T Consensus 291 ~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~~ 334 (385)
T 2b78_A 291 IDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNAA 334 (385)
T ss_dssp ECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred ECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCC
Confidence 975442 2221 235678889999999999999976543
No 265
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.24 E-value=8.7e-12 Score=130.20 Aligned_cols=114 Identities=14% Similarity=0.202 Sum_probs=89.9
Q ss_pred HHHHHHHHHcCCCCCCeEEEeccCchHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCccCC
Q 035870 616 RKVSLLIEKARVSKGQEVLEIGCGWGTLAIEIVKRTGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLAKAN 695 (842)
Q Consensus 616 ~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~~ 695 (842)
..++.+++.+.+.++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.+++++...++.++++++++|+.+++. .
T Consensus 15 ~i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~L~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~~~~-~ 92 (285)
T 1zq9_A 15 LIINSIIDKAALRPTDVVLEVGPGTGNMTVKLLEK-AKKVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLKTDL-P 92 (285)
T ss_dssp HHHHHHHHHTCCCTTCEEEEECCTTSTTHHHHHHH-SSEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTTTSCC-C
T ss_pred HHHHHHHHhcCCCCCCEEEEEcCcccHHHHHHHhh-CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcceecccc-h
Confidence 45568888888899999999999999999999998 789999999999999999998777665589999999988763 3
Q ss_pred CccEEEEcchhhhcChhhHHHHH--------------HHH--HhccccCcEEE
Q 035870 696 KYDRIISCEMIEAVGHEFMEEFF--------------GCC--ESLLAEDGLLV 732 (842)
Q Consensus 696 ~fD~i~s~~~~~~~~~~~~~~~~--------------~~~--~~~LkpgG~~~ 732 (842)
+||+|+++..++...+ ....++ +++ +++|||||.++
T Consensus 93 ~fD~vv~nlpy~~~~~-~~~~~l~~~~~~~~~~~m~qkEva~r~vlkPGg~~y 144 (285)
T 1zq9_A 93 FFDTCVANLPYQISSP-FVFKLLLHRPFFRCAILMFQREFALRLVAKPGDKLY 144 (285)
T ss_dssp CCSEEEEECCGGGHHH-HHHHHHHCSSCCSEEEEEEEHHHHHHHHCCTTCTTC
T ss_pred hhcEEEEecCcccchH-HHHHHHhcCcchhhhhhhhhHHHHHHHhcCCCCccc
Confidence 7999999755433211 111222 222 46899999874
No 266
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.24 E-value=1.8e-11 Score=129.99 Aligned_cols=110 Identities=17% Similarity=0.225 Sum_probs=87.2
Q ss_pred CCCCCCeEEEeccCchHHHHHHHHh-cCCEEEEEcCCHHHHHHHHHHHHHc--CC-CCCeEEEEccccCCc---cCCCcc
Q 035870 626 RVSKGQEVLEIGCGWGTLAIEIVKR-TGCKYTGITLSEEQLKYAEMKVKEA--GL-QDLIRLYLCDYRQLA---KANKYD 698 (842)
Q Consensus 626 ~~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gid~s~~~~~~a~~~~~~~--~l-~~~v~~~~~d~~~~~---~~~~fD 698 (842)
..+++.+|||||||+|.++..+++. +..+|+++|+|+.+++.|++++... ++ .++++++++|+.+.. ++++||
T Consensus 117 ~~~~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fD 196 (334)
T 1xj5_A 117 SIPNPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYD 196 (334)
T ss_dssp TSSCCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEE
T ss_pred hCCCCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCcc
Confidence 3456789999999999999999987 4579999999999999999988652 44 348999999987642 347899
Q ss_pred EEEEcchh--hhcChhhHHHHHHHHHhccccCcEEEEEe
Q 035870 699 RIISCEMI--EAVGHEFMEEFFGCCESLLAEDGLLVLQF 735 (842)
Q Consensus 699 ~i~s~~~~--~~~~~~~~~~~~~~~~~~LkpgG~~~~~~ 735 (842)
+|++...- .+...-....++++++++|||||.++++.
T Consensus 197 lIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 235 (334)
T 1xj5_A 197 AVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQA 235 (334)
T ss_dssp EEEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEEC
T ss_pred EEEECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEec
Confidence 99996542 11111124789999999999999999974
No 267
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.23 E-value=7.9e-12 Score=132.39 Aligned_cols=107 Identities=19% Similarity=0.229 Sum_probs=85.5
Q ss_pred HHHHHHHHcCCCCCCeEEEeccC------chHHHHHHHHh--cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccc
Q 035870 617 KVSLLIEKARVSKGQEVLEIGCG------WGTLAIEIVKR--TGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDY 688 (842)
Q Consensus 617 ~~~~l~~~l~~~~~~~vLDiGcG------~G~~~~~la~~--~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~ 688 (842)
.++.+++.+. .++.+||||||| +|+.+..++++ ++++|+|+|+|+.|.. ..++++++++|+
T Consensus 205 ~Ye~lL~~l~-~~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~~----------~~~rI~fv~GDa 273 (419)
T 3sso_A 205 HYDRHFRDYR-NQQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSHV----------DELRIRTIQGDQ 273 (419)
T ss_dssp HHHHHHGGGT-TSCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGGG----------CBTTEEEEECCT
T ss_pred HHHHHHHhhc-CCCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHhh----------cCCCcEEEEecc
Confidence 3455666654 356799999999 78888888876 5789999999999731 124899999999
Q ss_pred cCCc-c------CCCccEEEEcchhhhcChhhHHHHHHHHHhccccCcEEEEEeec
Q 035870 689 RQLA-K------ANKYDRIISCEMIEAVGHEFMEEFFGCCESLLAEDGLLVLQFIS 737 (842)
Q Consensus 689 ~~~~-~------~~~fD~i~s~~~~~~~~~~~~~~~~~~~~~~LkpgG~~~~~~~~ 737 (842)
.+++ . +++||+|+|... ++. .++..+|++++++|||||++++.++.
T Consensus 274 ~dlpf~~~l~~~d~sFDlVisdgs-H~~--~d~~~aL~el~rvLKPGGvlVi~Dl~ 326 (419)
T 3sso_A 274 NDAEFLDRIARRYGPFDIVIDDGS-HIN--AHVRTSFAALFPHVRPGGLYVIEDMW 326 (419)
T ss_dssp TCHHHHHHHHHHHCCEEEEEECSC-CCH--HHHHHHHHHHGGGEEEEEEEEEECGG
T ss_pred cccchhhhhhcccCCccEEEECCc-ccc--hhHHHHHHHHHHhcCCCeEEEEEecc
Confidence 9876 3 589999999754 444 34789999999999999999998876
No 268
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.23 E-value=2.1e-11 Score=128.23 Aligned_cols=111 Identities=23% Similarity=0.263 Sum_probs=86.3
Q ss_pred CCCCCeEEEeccCchHHHHHHHHh-cCCEEEEEcCCHHHHHHHHHHHHH--cCC-CCCeEEEEccccCC-c-cCCCccEE
Q 035870 627 VSKGQEVLEIGCGWGTLAIEIVKR-TGCKYTGITLSEEQLKYAEMKVKE--AGL-QDLIRLYLCDYRQL-A-KANKYDRI 700 (842)
Q Consensus 627 ~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gid~s~~~~~~a~~~~~~--~~l-~~~v~~~~~d~~~~-~-~~~~fD~i 700 (842)
..++.+|||||||+|.++..+++. +..+|+++|+|+++++.|++++.. .++ .++++++++|..+. + .+++||+|
T Consensus 93 ~~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~I 172 (304)
T 2o07_A 93 HPNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVI 172 (304)
T ss_dssp SSSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEEE
T ss_pred CCCCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceEE
Confidence 456789999999999999999987 357999999999999999998765 344 45899999998763 2 35789999
Q ss_pred EEcchhhhcChh--hHHHHHHHHHhccccCcEEEEEeec
Q 035870 701 ISCEMIEAVGHE--FMEEFFGCCESLLAEDGLLVLQFIS 737 (842)
Q Consensus 701 ~s~~~~~~~~~~--~~~~~~~~~~~~LkpgG~~~~~~~~ 737 (842)
++.......+.. ...+++++++++|||||.++++...
T Consensus 173 i~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 211 (304)
T 2o07_A 173 ITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQGEC 211 (304)
T ss_dssp EEECC-----------CHHHHHHHHHEEEEEEEEEEEEC
T ss_pred EECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEecCC
Confidence 996543222111 2367899999999999999997643
No 269
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.23 E-value=3.4e-11 Score=119.12 Aligned_cols=92 Identities=17% Similarity=0.186 Sum_probs=75.1
Q ss_pred CCCCCCeEEEeccCchHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCccCCCccEEEEcch
Q 035870 626 RVSKGQEVLEIGCGWGTLAIEIVKRTGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLAKANKYDRIISCEM 705 (842)
Q Consensus 626 ~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~~~fD~i~s~~~ 705 (842)
...++.+|||+|||+|.++..+++....+|+|+|+|+.+++.|++++. +++++++|+.+++ ++||+|+++.+
T Consensus 48 ~~~~~~~vlD~gcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~------~~~~~~~d~~~~~--~~~D~v~~~~p 119 (200)
T 1ne2_A 48 GNIGGRSVIDAGTGNGILACGSYLLGAESVTAFDIDPDAIETAKRNCG------GVNFMVADVSEIS--GKYDTWIMNPP 119 (200)
T ss_dssp TSSBTSEEEEETCTTCHHHHHHHHTTBSEEEEEESCHHHHHHHHHHCT------TSEEEECCGGGCC--CCEEEEEECCC
T ss_pred CCCCCCEEEEEeCCccHHHHHHHHcCCCEEEEEECCHHHHHHHHHhcC------CCEEEECcHHHCC--CCeeEEEECCC
Confidence 556788999999999999999998833479999999999999998864 6899999999986 78999999999
Q ss_pred hhhcChhhHHHHHHHHHhcc
Q 035870 706 IEAVGHEFMEEFFGCCESLL 725 (842)
Q Consensus 706 ~~~~~~~~~~~~~~~~~~~L 725 (842)
++|..+.....+++++.+++
T Consensus 120 ~~~~~~~~~~~~l~~~~~~~ 139 (200)
T 1ne2_A 120 FGSVVKHSDRAFIDKAFETS 139 (200)
T ss_dssp C-------CHHHHHHHHHHE
T ss_pred chhccCchhHHHHHHHHHhc
Confidence 99986544467888898888
No 270
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.23 E-value=3.5e-11 Score=130.70 Aligned_cols=110 Identities=17% Similarity=0.177 Sum_probs=88.8
Q ss_pred CCCCCeEEEeccCchHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCc--cCCCccEEEEcc
Q 035870 627 VSKGQEVLEIGCGWGTLAIEIVKRTGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLA--KANKYDRIISCE 704 (842)
Q Consensus 627 ~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~--~~~~fD~i~s~~ 704 (842)
.++|.+|||+|||+|.+++.+++. +++|+++|+|+.+++.|+++++.+++.. ++.++|+.+.. ..+.||+|+++.
T Consensus 212 ~~~g~~VLDlg~GtG~~sl~~a~~-ga~V~avDis~~al~~a~~n~~~ng~~~--~~~~~D~~~~l~~~~~~fD~Ii~dp 288 (393)
T 4dmg_A 212 VRPGERVLDVYSYVGGFALRAARK-GAYALAVDKDLEALGVLDQAALRLGLRV--DIRHGEALPTLRGLEGPFHHVLLDP 288 (393)
T ss_dssp CCTTCEEEEESCTTTHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHTCCC--EEEESCHHHHHHTCCCCEEEEEECC
T ss_pred hcCCCeEEEcccchhHHHHHHHHc-CCeEEEEECCHHHHHHHHHHHHHhCCCC--cEEEccHHHHHHHhcCCCCEEEECC
Confidence 357999999999999999999997 7889999999999999999999999863 56799987753 234599999976
Q ss_pred hhhhcCh-------hhHHHHHHHHHhccccCcEEEEEeecCC
Q 035870 705 MIEAVGH-------EFMEEFFGCCESLLAEDGLLVLQFISIP 739 (842)
Q Consensus 705 ~~~~~~~-------~~~~~~~~~~~~~LkpgG~~~~~~~~~~ 739 (842)
...+-+. +.+..+++.+.++|||||.+++.+++..
T Consensus 289 P~f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s~~ 330 (393)
T 4dmg_A 289 PTLVKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCSYH 330 (393)
T ss_dssp CCCCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTT
T ss_pred CcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCC
Confidence 5322111 2367889999999999999998766543
No 271
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.23 E-value=3.6e-11 Score=133.94 Aligned_cols=117 Identities=15% Similarity=0.193 Sum_probs=96.3
Q ss_pred HHHcCCC--CCCeEEEeccCchHHHHHHHHhc--CCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCc--cCC
Q 035870 622 IEKARVS--KGQEVLEIGCGWGTLAIEIVKRT--GCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLA--KAN 695 (842)
Q Consensus 622 ~~~l~~~--~~~~vLDiGcG~G~~~~~la~~~--~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~--~~~ 695 (842)
...+.+. ++++|||+|||+|..+.++|+.. +.+|+++|+|+.+++.++++++..|+. +++++++|..+++ .++
T Consensus 108 ~~~L~~~~~~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~~-nv~~~~~D~~~~~~~~~~ 186 (479)
T 2frx_A 108 VAALFADGNAPQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGIS-NVALTHFDGRVFGAAVPE 186 (479)
T ss_dssp HHHHTTTTCCCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTCC-SEEEECCCSTTHHHHSTT
T ss_pred HHHhCcccCCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC-cEEEEeCCHHHhhhhccc
Confidence 3455666 99999999999999999999873 479999999999999999999999986 7999999998875 357
Q ss_pred CccEEEEc------chhhhcCh--------------hhHHHHHHHHHhccccCcEEEEEeecCC
Q 035870 696 KYDRIISC------EMIEAVGH--------------EFMEEFFGCCESLLAEDGLLVLQFISIP 739 (842)
Q Consensus 696 ~fD~i~s~------~~~~~~~~--------------~~~~~~~~~~~~~LkpgG~~~~~~~~~~ 739 (842)
+||+|++. +++.+.++ +....+++++.++|||||++++.+++..
T Consensus 187 ~fD~Il~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs~~ 250 (479)
T 2frx_A 187 MFDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCTLN 250 (479)
T ss_dssp CEEEEEEECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCS
T ss_pred cCCEEEECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEecccCC
Confidence 89999983 33433322 1135789999999999999999887754
No 272
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.22 E-value=2.9e-10 Score=123.76 Aligned_cols=102 Identities=17% Similarity=0.229 Sum_probs=87.3
Q ss_pred CCCCCeEEEeccCchHHHHHHHHh-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccC-Ccc--CCCccEEEE
Q 035870 627 VSKGQEVLEIGCGWGTLAIEIVKR-TGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQ-LAK--ANKYDRIIS 702 (842)
Q Consensus 627 ~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~-~~~--~~~fD~i~s 702 (842)
..++.+|||+| |+|.++..+++. ++.+|+++|+|+++++.|+++++..|+. +++++++|+.+ ++. +++||+|++
T Consensus 170 ~~~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~g~~-~v~~~~~D~~~~l~~~~~~~fD~Vi~ 247 (373)
T 2qm3_A 170 DLENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEIGYE-DIEIFTFDLRKPLPDYALHKFDTFIT 247 (373)
T ss_dssp CSTTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHTCC-CEEEECCCTTSCCCTTTSSCBSEEEE
T ss_pred CCCCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCC-CEEEEEChhhhhchhhccCCccEEEE
Confidence 34688999999 999999999887 3369999999999999999999999987 89999999988 652 468999999
Q ss_pred cchhhhcChhhHHHHHHHHHhccccCcEEEE
Q 035870 703 CEMIEAVGHEFMEEFFGCCESLLAEDGLLVL 733 (842)
Q Consensus 703 ~~~~~~~~~~~~~~~~~~~~~~LkpgG~~~~ 733 (842)
+..+...+ ...+++++.++|||||++++
T Consensus 248 ~~p~~~~~---~~~~l~~~~~~LkpgG~~~~ 275 (373)
T 2qm3_A 248 DPPETLEA---IRAFVGRGIATLKGPRCAGY 275 (373)
T ss_dssp CCCSSHHH---HHHHHHHHHHTBCSTTCEEE
T ss_pred CCCCchHH---HHHHHHHHHHHcccCCeEEE
Confidence 87655432 58899999999999996533
No 273
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.22 E-value=2.5e-11 Score=118.65 Aligned_cols=110 Identities=24% Similarity=0.317 Sum_probs=84.3
Q ss_pred HHHHHHHHHcC-CCCCCeEEEeccCchHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCc-c
Q 035870 616 RKVSLLIEKAR-VSKGQEVLEIGCGWGTLAIEIVKRTGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLA-K 693 (842)
Q Consensus 616 ~~~~~l~~~l~-~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~-~ 693 (842)
.|+..+.++.. ++++.+|||+|||+|.++..+++. +.+|+|+|+|+.. .+ .+++++++|+.+.+ .
T Consensus 11 ~KL~ei~~~~~~~~~g~~VLDlG~G~G~~s~~la~~-~~~V~gvD~~~~~-----------~~-~~v~~~~~D~~~~~~~ 77 (191)
T 3dou_A 11 FKLEFLLDRYRVVRKGDAVIEIGSSPGGWTQVLNSL-ARKIISIDLQEME-----------EI-AGVRFIRCDIFKETIF 77 (191)
T ss_dssp HHHHHHHHHHCCSCTTCEEEEESCTTCHHHHHHTTT-CSEEEEEESSCCC-----------CC-TTCEEEECCTTSSSHH
T ss_pred HHHHHHHHHcCCCCCCCEEEEEeecCCHHHHHHHHc-CCcEEEEeccccc-----------cC-CCeEEEEccccCHHHH
Confidence 45566777665 478999999999999999999998 8899999999742 22 37999999998764 1
Q ss_pred -------C----CCccEEEEcchhhhcCh---------hhHHHHHHHHHhccccCcEEEEEeecC
Q 035870 694 -------A----NKYDRIISCEMIEAVGH---------EFMEEFFGCCESLLAEDGLLVLQFISI 738 (842)
Q Consensus 694 -------~----~~fD~i~s~~~~~~~~~---------~~~~~~~~~~~~~LkpgG~~~~~~~~~ 738 (842)
. ++||+|+|.......+. +....+++.+.++|||||.+++..+..
T Consensus 78 ~~~~~~~~~~~~~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~~~ 142 (191)
T 3dou_A 78 DDIDRALREEGIEKVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQFQG 142 (191)
T ss_dssp HHHHHHHHHHTCSSEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECS
T ss_pred HHHHHHhhcccCCcceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEcCC
Confidence 1 49999999754322111 124577899999999999999876543
No 274
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.21 E-value=3e-11 Score=132.86 Aligned_cols=111 Identities=19% Similarity=0.148 Sum_probs=92.7
Q ss_pred CCCCeEEEeccCchHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCc-----cCCCccEEEE
Q 035870 628 SKGQEVLEIGCGWGTLAIEIVKRTGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLA-----KANKYDRIIS 702 (842)
Q Consensus 628 ~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~-----~~~~fD~i~s 702 (842)
+++.+|||+|||+|.++..+++....+|+++|+|+.+++.|+++++.+++.++++++++|+.+.. ..++||+|++
T Consensus 216 ~~~~~VLDl~~G~G~~~~~la~~g~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~~~~~~~~~~fD~Vi~ 295 (396)
T 2as0_A 216 QPGDRVLDVFTYTGGFAIHAAIAGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKKGEKFDIVVL 295 (396)
T ss_dssp CTTCEEEETTCTTTHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred hCCCeEEEecCCCCHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHHHHHHHhhCCCCCEEEE
Confidence 47899999999999999999987334999999999999999999999998768999999987764 2578999999
Q ss_pred cchhhhcCh-------hhHHHHHHHHHhccccCcEEEEEeecC
Q 035870 703 CEMIEAVGH-------EFMEEFFGCCESLLAEDGLLVLQFISI 738 (842)
Q Consensus 703 ~~~~~~~~~-------~~~~~~~~~~~~~LkpgG~~~~~~~~~ 738 (842)
......... +.+..++.++.++|||||.+++.+...
T Consensus 296 dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 338 (396)
T 2as0_A 296 DPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCSQ 338 (396)
T ss_dssp CCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECCT
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCC
Confidence 754322111 347889999999999999999877654
No 275
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.21 E-value=1e-11 Score=130.88 Aligned_cols=107 Identities=26% Similarity=0.340 Sum_probs=83.3
Q ss_pred CCCCeEEEeccCchHHHHHHHHh-cCCEEEEEcCCHHHHHHHHHHHHHc--CC-CCCeEEEEccccCCc--cCCCccEEE
Q 035870 628 SKGQEVLEIGCGWGTLAIEIVKR-TGCKYTGITLSEEQLKYAEMKVKEA--GL-QDLIRLYLCDYRQLA--KANKYDRII 701 (842)
Q Consensus 628 ~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gid~s~~~~~~a~~~~~~~--~l-~~~v~~~~~d~~~~~--~~~~fD~i~ 701 (842)
.++.+|||||||+|..+..+++. +..+|+++|+|+++++.|++++... ++ .++++++.+|+.+.. .+++||+|+
T Consensus 107 ~~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 186 (314)
T 2b2c_A 107 PDPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVII 186 (314)
T ss_dssp SSCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEEE
Confidence 45679999999999999999987 4679999999999999999987653 33 458999999987643 457899999
Q ss_pred EcchhhhcCh-hhH--HHHHHHHHhccccCcEEEEEe
Q 035870 702 SCEMIEAVGH-EFM--EEFFGCCESLLAEDGLLVLQF 735 (842)
Q Consensus 702 s~~~~~~~~~-~~~--~~~~~~~~~~LkpgG~~~~~~ 735 (842)
+... .+++. +.+ .+++++++++|||||.++++.
T Consensus 187 ~d~~-~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~ 222 (314)
T 2b2c_A 187 TDSS-DPVGPAESLFGQSYYELLRDALKEDGILSSQG 222 (314)
T ss_dssp ECCC--------------HHHHHHHHEEEEEEEEEEC
T ss_pred EcCC-CCCCcchhhhHHHHHHHHHhhcCCCeEEEEEC
Confidence 8654 33322 112 789999999999999999975
No 276
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.21 E-value=3.5e-11 Score=127.40 Aligned_cols=110 Identities=22% Similarity=0.247 Sum_probs=88.2
Q ss_pred CCCCeEEEeccCchHHHHHHHHh-cCCEEEEEcCCHHHHHHHHHHHHH--cC-C-CCCeEEEEccccCC-c-cCCCccEE
Q 035870 628 SKGQEVLEIGCGWGTLAIEIVKR-TGCKYTGITLSEEQLKYAEMKVKE--AG-L-QDLIRLYLCDYRQL-A-KANKYDRI 700 (842)
Q Consensus 628 ~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gid~s~~~~~~a~~~~~~--~~-l-~~~v~~~~~d~~~~-~-~~~~fD~i 700 (842)
+++.+|||||||+|.++..+++. +..+|+++|+|+++++.|++++.. .+ + .++++++++|+.+. + .+++||+|
T Consensus 76 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~I 155 (314)
T 1uir_A 76 PEPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDVV 155 (314)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEEE
T ss_pred CCCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccEE
Confidence 45689999999999999999987 467999999999999999998764 22 2 35899999998774 3 45789999
Q ss_pred EEcchhhh---cChhh--HHHHHHHHHhccccCcEEEEEeec
Q 035870 701 ISCEMIEA---VGHEF--MEEFFGCCESLLAEDGLLVLQFIS 737 (842)
Q Consensus 701 ~s~~~~~~---~~~~~--~~~~~~~~~~~LkpgG~~~~~~~~ 737 (842)
++....+. -+.+. ..+++++++++|||||.++++...
T Consensus 156 i~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 197 (314)
T 1uir_A 156 IIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQTGM 197 (314)
T ss_dssp EEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEEEE
T ss_pred EECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEEccC
Confidence 99765433 11111 378999999999999999997543
No 277
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.21 E-value=4.3e-11 Score=131.49 Aligned_cols=111 Identities=19% Similarity=0.109 Sum_probs=92.5
Q ss_pred CCCCeEEEeccCchHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHHcCC-CCCeEEEEccccCCcc-----CCCccEEE
Q 035870 628 SKGQEVLEIGCGWGTLAIEIVKRTGCKYTGITLSEEQLKYAEMKVKEAGL-QDLIRLYLCDYRQLAK-----ANKYDRII 701 (842)
Q Consensus 628 ~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~~l-~~~v~~~~~d~~~~~~-----~~~fD~i~ 701 (842)
.++.+|||+|||+|.++..+++....+|+++|+|+.+++.|+++++.+++ +++++++++|+.+..+ .++||+|+
T Consensus 219 ~~~~~VLDl~cG~G~~sl~la~~g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~~~~~~fD~Ii 298 (396)
T 3c0k_A 219 VENKRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVIV 298 (396)
T ss_dssp CTTCEEEEESCTTCSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred hCCCeEEEeeccCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHhcCCCCCEEE
Confidence 57889999999999999999987335999999999999999999999998 6689999999877641 46899999
Q ss_pred EcchhhhcC-------hhhHHHHHHHHHhccccCcEEEEEeecC
Q 035870 702 SCEMIEAVG-------HEFMEEFFGCCESLLAEDGLLVLQFISI 738 (842)
Q Consensus 702 s~~~~~~~~-------~~~~~~~~~~~~~~LkpgG~~~~~~~~~ 738 (842)
+........ .+.+..++.++.++|||||.+++.+...
T Consensus 299 ~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 342 (396)
T 3c0k_A 299 MDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCSG 342 (396)
T ss_dssp ECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred ECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCC
Confidence 986432211 1347889999999999999999976543
No 278
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.20 E-value=1.4e-11 Score=130.63 Aligned_cols=108 Identities=21% Similarity=0.329 Sum_probs=86.5
Q ss_pred CCCCeEEEeccCchHHHHHHHHh-cCCEEEEEcCCHHHHHHHHHHHHH--cCC-CCCeEEEEccccCCc--cCCCccEEE
Q 035870 628 SKGQEVLEIGCGWGTLAIEIVKR-TGCKYTGITLSEEQLKYAEMKVKE--AGL-QDLIRLYLCDYRQLA--KANKYDRII 701 (842)
Q Consensus 628 ~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gid~s~~~~~~a~~~~~~--~~l-~~~v~~~~~d~~~~~--~~~~fD~i~ 701 (842)
+++.+|||||||+|.++..+++. ++.+|+++|+|+++++.|++++.. .++ .++++++++|+.+.. .+++||+|+
T Consensus 115 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvIi 194 (321)
T 2pt6_A 115 KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVII 194 (321)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEE
T ss_pred CCCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEEE
Confidence 45689999999999999999987 468999999999999999998765 233 358999999987642 357899999
Q ss_pred EcchhhhcC-hhhH--HHHHHHHHhccccCcEEEEEee
Q 035870 702 SCEMIEAVG-HEFM--EEFFGCCESLLAEDGLLVLQFI 736 (842)
Q Consensus 702 s~~~~~~~~-~~~~--~~~~~~~~~~LkpgG~~~~~~~ 736 (842)
+... .+.+ .+.. .+++++++++|||||.++++..
T Consensus 195 ~d~~-~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 231 (321)
T 2pt6_A 195 VDSS-DPIGPAETLFNQNFYEKIYNALKPNGYCVAQCE 231 (321)
T ss_dssp EECC-CSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEEC
T ss_pred ECCc-CCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcC
Confidence 9753 2221 1112 7899999999999999999754
No 279
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.20 E-value=9.4e-11 Score=130.06 Aligned_cols=120 Identities=17% Similarity=0.190 Sum_probs=98.3
Q ss_pred HHHHHHcCCCCCCeEEEeccCchHHHHHHHHh-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCc---cC
Q 035870 619 SLLIEKARVSKGQEVLEIGCGWGTLAIEIVKR-TGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLA---KA 694 (842)
Q Consensus 619 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~---~~ 694 (842)
..+...+..+++.+|||+|||+|..+.++++. ++.+|+++|+|+.+++.++++++..|+ +++++++|+.+++ ++
T Consensus 236 ~~~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g~--~~~~~~~D~~~~~~~~~~ 313 (429)
T 1sqg_A 236 QGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGM--KATVKQGDGRYPSQWCGE 313 (429)
T ss_dssp HTHHHHHCCCTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTC--CCEEEECCTTCTHHHHTT
T ss_pred HHHHHHcCCCCcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcCC--CeEEEeCchhhchhhccc
Confidence 34556677889999999999999999999998 347999999999999999999999887 4799999998876 34
Q ss_pred CCccEEEEc------chhhhcChh--------------hHHHHHHHHHhccccCcEEEEEeecCCC
Q 035870 695 NKYDRIISC------EMIEAVGHE--------------FMEEFFGCCESLLAEDGLLVLQFISIPD 740 (842)
Q Consensus 695 ~~fD~i~s~------~~~~~~~~~--------------~~~~~~~~~~~~LkpgG~~~~~~~~~~~ 740 (842)
++||+|++. +++.+.++. ....+++++.++|||||++++.+++...
T Consensus 314 ~~fD~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs~~~ 379 (429)
T 1sqg_A 314 QQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLP 379 (429)
T ss_dssp CCEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESCCCG
T ss_pred CCCCEEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCh
Confidence 689999973 344444331 1258899999999999999998876543
No 280
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.20 E-value=3.6e-11 Score=125.41 Aligned_cols=111 Identities=19% Similarity=0.221 Sum_probs=88.1
Q ss_pred CCCCCCeEEEeccCchHHHHHHHHh-cCCEEEEEcCCHHHHHHHHHHHHHcC--C-CCCeEEEEccccCCc--cCCCccE
Q 035870 626 RVSKGQEVLEIGCGWGTLAIEIVKR-TGCKYTGITLSEEQLKYAEMKVKEAG--L-QDLIRLYLCDYRQLA--KANKYDR 699 (842)
Q Consensus 626 ~~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gid~s~~~~~~a~~~~~~~~--l-~~~v~~~~~d~~~~~--~~~~fD~ 699 (842)
..+++.+|||||||+|..+..+++. +..+|+++|+|+.+++.|++++...+ + .++++++++|+.+.. .+++||+
T Consensus 75 ~~~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~ 154 (283)
T 2i7c_A 75 VSKEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDV 154 (283)
T ss_dssp TSSSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEE
T ss_pred cCCCCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceE
Confidence 3456789999999999999999987 45799999999999999999875432 2 358999999987643 3578999
Q ss_pred EEEcchhhhcChhhH--HHHHHHHHhccccCcEEEEEee
Q 035870 700 IISCEMIEAVGHEFM--EEFFGCCESLLAEDGLLVLQFI 736 (842)
Q Consensus 700 i~s~~~~~~~~~~~~--~~~~~~~~~~LkpgG~~~~~~~ 736 (842)
|++.....+.+.+.+ .++++.++++|||||.++++..
T Consensus 155 Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~ 193 (283)
T 2i7c_A 155 IIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCE 193 (283)
T ss_dssp EEEECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEECC
T ss_pred EEEcCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEECC
Confidence 999654332222223 7999999999999999999754
No 281
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=99.20 E-value=1.8e-10 Score=112.85 Aligned_cols=103 Identities=16% Similarity=0.072 Sum_probs=88.5
Q ss_pred CCCCeEEEeccCchHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCccCCCccEEEEcchhh
Q 035870 628 SKGQEVLEIGCGWGTLAIEIVKRTGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLAKANKYDRIISCEMIE 707 (842)
Q Consensus 628 ~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~~~fD~i~s~~~~~ 707 (842)
.++.+|||||||+|.++..+. ++.+|+++|+|+.+++.+++++..++. +.++.++|+...++.++||+|+++-+++
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~--~~~~y~a~DId~~~i~~ar~~~~~~g~--~~~~~v~D~~~~~~~~~~DvvLllk~lh 179 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER--GIASVWGCDIHQGLGDVITPFAREKDW--DFTFALQDVLCAPPAEAGDLALIFKLLP 179 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT--TCSEEEEEESBHHHHHHHHHHHHHTTC--EEEEEECCTTTSCCCCBCSEEEEESCHH
T ss_pred CCCCeEEEecCCccHHHHHhc--cCCeEEEEeCCHHHHHHHHHHHHhcCC--CceEEEeecccCCCCCCcchHHHHHHHH
Confidence 567799999999999999877 588999999999999999999988874 6899999998888667999999999999
Q ss_pred hcChhhHHHHHHHHHhccccCcEEEEEe
Q 035870 708 AVGHEFMEEFFGCCESLLAEDGLLVLQF 735 (842)
Q Consensus 708 ~~~~~~~~~~~~~~~~~LkpgG~~~~~~ 735 (842)
|+.++.....+ ++.+.|+++|.++-..
T Consensus 180 ~LE~q~~~~~~-~ll~aL~~~~vvVsfP 206 (253)
T 3frh_A 180 LLEREQAGSAM-ALLQSLNTPRMAVSFP 206 (253)
T ss_dssp HHHHHSTTHHH-HHHHHCBCSEEEEEEE
T ss_pred HhhhhchhhHH-HHHHHhcCCCEEEEcC
Confidence 98766556666 7777899998777643
No 282
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.20 E-value=3.7e-12 Score=131.55 Aligned_cols=117 Identities=11% Similarity=0.099 Sum_probs=85.1
Q ss_pred HHHHHHHHHcCCCCCCeEEEeccCchHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHH-HHcCCCCCeEEE--EccccCCc
Q 035870 616 RKVSLLIEKARVSKGQEVLEIGCGWGTLAIEIVKRTGCKYTGITLSEEQLKYAEMKV-KEAGLQDLIRLY--LCDYRQLA 692 (842)
Q Consensus 616 ~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~-~~~~l~~~v~~~--~~d~~~~~ 692 (842)
.|+..+.+...++++.+|||+|||+|.++..+++. .+|+|+|+|+ |+..++++. .......++.++ ++|+.+++
T Consensus 69 ~KL~~i~~~~~~~~g~~VLDlGcGtG~~s~~la~~--~~V~gVD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~ 145 (276)
T 2wa2_A 69 AKLAWIDERGGVELKGTVVDLGCGRGSWSYYAASQ--PNVREVKAYT-LGTSGHEKPRLVETFGWNLITFKSKVDVTKME 145 (276)
T ss_dssp HHHHHHHHTTSCCCCEEEEEESCTTCHHHHHHHTS--TTEEEEEEEC-CCCTTSCCCCCCCCTTGGGEEEECSCCGGGCC
T ss_pred HHHHHHHHcCCCCCCCEEEEeccCCCHHHHHHHHc--CCEEEEECch-hhhhhhhchhhhhhcCCCeEEEeccCcHhhCC
Confidence 34556666655678999999999999999999987 6999999998 543332211 000111268999 99999887
Q ss_pred cCCCccEEEEcchhhhcChhh---H--HHHHHHHHhccccCc--EEEEEeec
Q 035870 693 KANKYDRIISCEMIEAVGHEF---M--EEFFGCCESLLAEDG--LLVLQFIS 737 (842)
Q Consensus 693 ~~~~fD~i~s~~~~~~~~~~~---~--~~~~~~~~~~LkpgG--~~~~~~~~ 737 (842)
+++||+|+|..+ ++.+... . ..+++.+.++||||| .+++..+.
T Consensus 146 -~~~fD~Vvsd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~~~ 195 (276)
T 2wa2_A 146 -PFQADTVLCDIG-ESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKVLN 195 (276)
T ss_dssp -CCCCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEESC
T ss_pred -CCCcCEEEECCC-cCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEeCC
Confidence 578999999876 4433211 1 137899999999999 99986655
No 283
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.19 E-value=1.5e-11 Score=128.15 Aligned_cols=108 Identities=21% Similarity=0.248 Sum_probs=84.8
Q ss_pred CCCCeEEEeccCchHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHHc--CC--------CCCeEEEEccccCCc-cCCC
Q 035870 628 SKGQEVLEIGCGWGTLAIEIVKRTGCKYTGITLSEEQLKYAEMKVKEA--GL--------QDLIRLYLCDYRQLA-KANK 696 (842)
Q Consensus 628 ~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~--~l--------~~~v~~~~~d~~~~~-~~~~ 696 (842)
.++.+|||||||+|.++..+++.+..+|+++|+|+++++.|++++ .. ++ .++++++.+|..+.. .+++
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~~~~~v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~~~~ 152 (281)
T 1mjf_A 74 PKPKRVLVIGGGDGGTVREVLQHDVDEVIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGKHEKAKLTIGDGFEFIKNNRG 152 (281)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTSCCSEEEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTCCSSEEEEESCHHHHHHHCCC
T ss_pred CCCCeEEEEcCCcCHHHHHHHhCCCCEEEEEECCHHHHHHHHHHH-hhccccccccccCCCCcEEEEECchHHHhcccCC
Confidence 466899999999999999999884569999999999999999987 43 32 358999999986642 2478
Q ss_pred ccEEEEcchhhhcChhh--HHHHHHHHHhccccCcEEEEEee
Q 035870 697 YDRIISCEMIEAVGHEF--MEEFFGCCESLLAEDGLLVLQFI 736 (842)
Q Consensus 697 fD~i~s~~~~~~~~~~~--~~~~~~~~~~~LkpgG~~~~~~~ 736 (842)
||+|++......-+.+. ..+++++++++|||||.++++..
T Consensus 153 fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~ 194 (281)
T 1mjf_A 153 FDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQAG 194 (281)
T ss_dssp EEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEEEE
T ss_pred eeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcC
Confidence 99999975532111111 37899999999999999999754
No 284
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=99.18 E-value=4.3e-12 Score=130.39 Aligned_cols=117 Identities=15% Similarity=0.100 Sum_probs=84.9
Q ss_pred HHHHHHHHHcCCCCCCeEEEeccCchHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHH-HHcCCCCCeEEE--EccccCCc
Q 035870 616 RKVSLLIEKARVSKGQEVLEIGCGWGTLAIEIVKRTGCKYTGITLSEEQLKYAEMKV-KEAGLQDLIRLY--LCDYRQLA 692 (842)
Q Consensus 616 ~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~-~~~~l~~~v~~~--~~d~~~~~ 692 (842)
.|+..++++..++++.+|||||||+|.++..+++. .+|+|+|+|+ ++..++++. .......++.++ ++|+.+++
T Consensus 61 ~KL~~i~~~~~~~~g~~VLDlGcGtG~~s~~la~~--~~V~gvD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~ 137 (265)
T 2oxt_A 61 AKLAWMEERGYVELTGRVVDLGCGRGGWSYYAASR--PHVMDVRAYT-LGVGGHEVPRITESYGWNIVKFKSRVDIHTLP 137 (265)
T ss_dssp HHHHHHHHHTSCCCCEEEEEESCTTSHHHHHHHTS--TTEEEEEEEC-CCCSSCCCCCCCCBTTGGGEEEECSCCTTTSC
T ss_pred HHHHHHHHcCCCCCCCEEEEeCcCCCHHHHHHHHc--CcEEEEECch-hhhhhhhhhhhhhccCCCeEEEecccCHhHCC
Confidence 34556666656788999999999999999999987 6999999998 533322110 000011168999 99999887
Q ss_pred cCCCccEEEEcchhhhcChhh---H--HHHHHHHHhccccCc--EEEEEeec
Q 035870 693 KANKYDRIISCEMIEAVGHEF---M--EEFFGCCESLLAEDG--LLVLQFIS 737 (842)
Q Consensus 693 ~~~~fD~i~s~~~~~~~~~~~---~--~~~~~~~~~~LkpgG--~~~~~~~~ 737 (842)
+++||+|+|..+ ++.++.. . ..+++.+.++||||| .+++..+.
T Consensus 138 -~~~fD~V~sd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~~ 187 (265)
T 2oxt_A 138 -VERTDVIMCDVG-ESSPKWSVESERTIKILELLEKWKVKNPSADFVVKVLC 187 (265)
T ss_dssp -CCCCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEESC
T ss_pred -CCCCcEEEEeCc-ccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEeCC
Confidence 578999999876 4443311 1 137899999999999 99987655
No 285
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.17 E-value=4.8e-11 Score=130.32 Aligned_cols=108 Identities=21% Similarity=0.221 Sum_probs=91.2
Q ss_pred CCCeEEEeccCchHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCcc-----CCCccEEEEc
Q 035870 629 KGQEVLEIGCGWGTLAIEIVKRTGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLAK-----ANKYDRIISC 703 (842)
Q Consensus 629 ~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~-----~~~fD~i~s~ 703 (842)
++.+|||+|||+|.++..+++. +.+|+++|+|+.+++.|+++++.++++ +++++++|+.+..+ .++||+|++.
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~-~~~v~~vD~s~~~~~~a~~n~~~n~~~-~~~~~~~d~~~~~~~~~~~~~~fD~Ii~d 286 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALG-FREVVAVDSSAEALRRAEENARLNGLG-NVRVLEANAFDLLRRLEKEGERFDLVVLD 286 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHH-EEEEEEEESCHHHHHHHHHHHHHTTCT-TEEEEESCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCCeEEEeeeccCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHcCCC-CceEEECCHHHHHHHHHhcCCCeeEEEEC
Confidence 7889999999999999999998 789999999999999999999999987 49999999877641 5789999996
Q ss_pred chhhhcCh-------hhHHHHHHHHHhccccCcEEEEEeecC
Q 035870 704 EMIEAVGH-------EFMEEFFGCCESLLAEDGLLVLQFISI 738 (842)
Q Consensus 704 ~~~~~~~~-------~~~~~~~~~~~~~LkpgG~~~~~~~~~ 738 (842)
......+. +.+..++..+.++|||||.+++.+...
T Consensus 287 pP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 328 (382)
T 1wxx_A 287 PPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCSH 328 (382)
T ss_dssp CCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred CCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCC
Confidence 54322111 346789999999999999999977543
No 286
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.17 E-value=5e-11 Score=125.05 Aligned_cols=109 Identities=24% Similarity=0.309 Sum_probs=84.4
Q ss_pred CCCCeEEEeccCchHHHHHHHHh-cCCEEEEEcCCHHHHHHHHHHHHH--cCC-CCCeEEEEccccCC-c-cCCCccEEE
Q 035870 628 SKGQEVLEIGCGWGTLAIEIVKR-TGCKYTGITLSEEQLKYAEMKVKE--AGL-QDLIRLYLCDYRQL-A-KANKYDRII 701 (842)
Q Consensus 628 ~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gid~s~~~~~~a~~~~~~--~~l-~~~v~~~~~d~~~~-~-~~~~fD~i~ 701 (842)
.++.+|||||||+|.++..+++. +..+|+++|+|+.+++.|++++.. .++ .++++++++|+.+. + .+++||+|+
T Consensus 89 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 168 (296)
T 1inl_A 89 PNPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVII 168 (296)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEEE
Confidence 45689999999999999999987 457999999999999999998764 333 35899999998764 2 357899999
Q ss_pred EcchhhhcChh---hHHHHHHHHHhccccCcEEEEEee
Q 035870 702 SCEMIEAVGHE---FMEEFFGCCESLLAEDGLLVLQFI 736 (842)
Q Consensus 702 s~~~~~~~~~~---~~~~~~~~~~~~LkpgG~~~~~~~ 736 (842)
+...-.+++.. ...+++++++++|||||.++++..
T Consensus 169 ~d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 206 (296)
T 1inl_A 169 IDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAETE 206 (296)
T ss_dssp EEC----------CCSHHHHHHHHHHEEEEEEEEEECC
T ss_pred EcCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEEcc
Confidence 86432212210 237899999999999999999753
No 287
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.17 E-value=2.7e-11 Score=125.70 Aligned_cols=109 Identities=23% Similarity=0.259 Sum_probs=86.3
Q ss_pred CCCCeEEEeccCchHHHHHHHHh-cCCEEEEEcCCHHHHHHHHHHHHHc--CC-CCCeEEEEccccCCc--cCCCccEEE
Q 035870 628 SKGQEVLEIGCGWGTLAIEIVKR-TGCKYTGITLSEEQLKYAEMKVKEA--GL-QDLIRLYLCDYRQLA--KANKYDRII 701 (842)
Q Consensus 628 ~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gid~s~~~~~~a~~~~~~~--~l-~~~v~~~~~d~~~~~--~~~~fD~i~ 701 (842)
.++.+|||||||+|.++..+++. +..+|+++|+|+++++.|++++... ++ .++++++.+|+.+.. .+++||+|+
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~Ii 153 (275)
T 1iy9_A 74 PNPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVIM 153 (275)
T ss_dssp SSCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEEE
T ss_pred CCCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEEE
Confidence 35679999999999999999987 4579999999999999999987542 34 358999999987642 347899999
Q ss_pred EcchhhhcChh--hHHHHHHHHHhccccCcEEEEEee
Q 035870 702 SCEMIEAVGHE--FMEEFFGCCESLLAEDGLLVLQFI 736 (842)
Q Consensus 702 s~~~~~~~~~~--~~~~~~~~~~~~LkpgG~~~~~~~ 736 (842)
+.......+.. ...+++++++++|||||.++++..
T Consensus 154 ~d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~~ 190 (275)
T 1iy9_A 154 VDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQTD 190 (275)
T ss_dssp ESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEECC
T ss_pred ECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcC
Confidence 96543221111 126899999999999999999753
No 288
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.16 E-value=7.7e-11 Score=126.13 Aligned_cols=102 Identities=21% Similarity=0.240 Sum_probs=89.7
Q ss_pred CCCCeEEEeccCchHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCccCCCccEEEEcchhh
Q 035870 628 SKGQEVLEIGCGWGTLAIEIVKRTGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLAKANKYDRIISCEMIE 707 (842)
Q Consensus 628 ~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~~~fD~i~s~~~~~ 707 (842)
.++.+|||+|||+|.+++. ++ .+.+|+++|+|+.+++.|+++++.+++.++++++++|+.+.. ++||+|+++....
T Consensus 194 ~~~~~VLDlg~G~G~~~l~-a~-~~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~--~~fD~Vi~dpP~~ 269 (336)
T 2yx1_A 194 SLNDVVVDMFAGVGPFSIA-CK-NAKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVD--VKGNRVIMNLPKF 269 (336)
T ss_dssp CTTCEEEETTCTTSHHHHH-TT-TSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCC--CCEEEEEECCTTT
T ss_pred CCCCEEEEccCccCHHHHh-cc-CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhc--CCCcEEEECCcHh
Confidence 5789999999999999999 87 478999999999999999999999999778999999999887 7999999975322
Q ss_pred hcChhhHHHHHHHHHhccccCcEEEEEeecCC
Q 035870 708 AVGHEFMEEFFGCCESLLAEDGLLVLQFISIP 739 (842)
Q Consensus 708 ~~~~~~~~~~~~~~~~~LkpgG~~~~~~~~~~ 739 (842)
...+++.+.++|+|||.+++.++...
T Consensus 270 ------~~~~l~~~~~~L~~gG~l~~~~~~~~ 295 (336)
T 2yx1_A 270 ------AHKFIDKALDIVEEGGVIHYYTIGKD 295 (336)
T ss_dssp ------GGGGHHHHHHHEEEEEEEEEEEEESS
T ss_pred ------HHHHHHHHHHHcCCCCEEEEEEeecC
Confidence 23788899999999999999776543
No 289
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.15 E-value=8.9e-11 Score=137.27 Aligned_cols=107 Identities=18% Similarity=0.180 Sum_probs=90.7
Q ss_pred CCCeEEEeccCchHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHHcCCC-CCeEEEEccccCCc--cCCCccEEEEcch
Q 035870 629 KGQEVLEIGCGWGTLAIEIVKRTGCKYTGITLSEEQLKYAEMKVKEAGLQ-DLIRLYLCDYRQLA--KANKYDRIISCEM 705 (842)
Q Consensus 629 ~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~~l~-~~v~~~~~d~~~~~--~~~~fD~i~s~~~ 705 (842)
+|.+|||+|||+|.+++.+++....+|+++|+|+.+++.|+++++.+++. ++++++++|+.+.. ..++||+|++...
T Consensus 539 ~g~~VLDlg~GtG~~sl~aa~~ga~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~~~~~fD~Ii~DPP 618 (703)
T 3v97_A 539 KGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDPP 618 (703)
T ss_dssp TTCEEEEESCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHHHHHCCCCEEEEEECCC
T ss_pred CCCcEEEeeechhHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHHHHhcCCCccEEEECCc
Confidence 68899999999999999999873346999999999999999999999997 68999999988743 4578999999764
Q ss_pred h-----------hhcChhhHHHHHHHHHhccccCcEEEEEeec
Q 035870 706 I-----------EAVGHEFMEEFFGCCESLLAEDGLLVLQFIS 737 (842)
Q Consensus 706 ~-----------~~~~~~~~~~~~~~~~~~LkpgG~~~~~~~~ 737 (842)
. .+. +.+..+++.+.++|||||++++....
T Consensus 619 ~f~~~~~~~~~~~~~--~~~~~ll~~a~~~LkpgG~L~~s~~~ 659 (703)
T 3v97_A 619 TFSNSKRMEDAFDVQ--RDHLALMKDLKRLLRAGGTIMFSNNK 659 (703)
T ss_dssp SBC-------CCBHH--HHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred cccCCccchhHHHHH--HHHHHHHHHHHHhcCCCcEEEEEECC
Confidence 2 222 34788999999999999999986543
No 290
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=99.13 E-value=1.5e-10 Score=121.53 Aligned_cols=111 Identities=20% Similarity=0.281 Sum_probs=85.3
Q ss_pred HHHHHHHHHcCCCCCCeEEEeccCchHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCccCC
Q 035870 616 RKVSLLIEKARVSKGQEVLEIGCGWGTLAIEIVKRTGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLAKAN 695 (842)
Q Consensus 616 ~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~~ 695 (842)
...+.+++.+.+.++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.+++++...++ ++++++++|+.+++. +
T Consensus 29 ~i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~La~~-~~~v~~vDi~~~~~~~a~~~~~~~~~-~~v~~~~~D~~~~~~-~ 105 (299)
T 2h1r_A 29 GILDKIIYAAKIKSSDIVLEIGCGTGNLTVKLLPL-AKKVITIDIDSRMISEVKKRCLYEGY-NNLEVYEGDAIKTVF-P 105 (299)
T ss_dssp HHHHHHHHHHCCCTTCEEEEECCTTSTTHHHHTTT-SSEEEEECSCHHHHHHHHHHHHHTTC-CCEEC----CCSSCC-C
T ss_pred HHHHHHHHhcCCCCcCEEEEEcCcCcHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHHcCC-CceEEEECchhhCCc-c
Confidence 44567788888889999999999999999999987 78999999999999999999988777 489999999988764 4
Q ss_pred CccEEEEcchhhhcChhhHHHHH---------------HHHHhccccCcE
Q 035870 696 KYDRIISCEMIEAVGHEFMEEFF---------------GCCESLLAEDGL 730 (842)
Q Consensus 696 ~fD~i~s~~~~~~~~~~~~~~~~---------------~~~~~~LkpgG~ 730 (842)
+||+|+++...+.. ......++ +.+.|+++|+|.
T Consensus 106 ~~D~Vv~n~py~~~-~~~~~~ll~~~~~~~~~~l~~Q~e~a~rlla~~G~ 154 (299)
T 2h1r_A 106 KFDVCTANIPYKIS-SPLIFKLISHRPLFKCAVLMFQKEFAERMLANVGD 154 (299)
T ss_dssp CCSEEEEECCGGGH-HHHHHHHHHCSSCCSEEEEEEEHHHHHHHTCCTTS
T ss_pred cCCEEEEcCCcccc-cHHHHHHHhcCCccceeeehHHHHHHHHHhcCCCC
Confidence 89999998665433 22233333 346678888773
No 291
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.12 E-value=1.7e-10 Score=124.35 Aligned_cols=116 Identities=16% Similarity=0.129 Sum_probs=93.7
Q ss_pred HHHHHHc-CCCCCCeEEEeccCchHHHHHHHHhc-C-----CEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCC
Q 035870 619 SLLIEKA-RVSKGQEVLEIGCGWGTLAIEIVKRT-G-----CKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQL 691 (842)
Q Consensus 619 ~~l~~~l-~~~~~~~vLDiGcG~G~~~~~la~~~-~-----~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~ 691 (842)
..++..+ ...++.+|||+|||+|.++..+++.. . .+++|+|+|+.+++.|+.++...|+ +++++++|....
T Consensus 119 ~~ll~~l~~~~~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~--~~~i~~~D~l~~ 196 (344)
T 2f8l_A 119 AYLLEKVIQKKKNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQ--KMTLLHQDGLAN 196 (344)
T ss_dssp HHHHHHHHTTCSEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTC--CCEEEESCTTSC
T ss_pred HHHHHHhcCCCCCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCC--CceEEECCCCCc
Confidence 3344443 44577899999999999999998873 2 7899999999999999999988887 589999998765
Q ss_pred ccCCCccEEEEcchhhhcChhhH----------------HHHHHHHHhccccCcEEEEEee
Q 035870 692 AKANKYDRIISCEMIEAVGHEFM----------------EEFFGCCESLLAEDGLLVLQFI 736 (842)
Q Consensus 692 ~~~~~fD~i~s~~~~~~~~~~~~----------------~~~~~~~~~~LkpgG~~~~~~~ 736 (842)
...++||+|+++..+.+++.+.. ..+++++.+.|||||++++...
T Consensus 197 ~~~~~fD~Ii~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p 257 (344)
T 2f8l_A 197 LLVDPVDVVISDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVP 257 (344)
T ss_dssp CCCCCEEEEEEECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred cccCCccEEEECCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEEC
Confidence 45578999999998776643221 2689999999999999988653
No 292
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.12 E-value=1.3e-10 Score=114.46 Aligned_cols=108 Identities=17% Similarity=0.170 Sum_probs=80.5
Q ss_pred HHHHHHHcC-CCCCCeEEEeccCchHHHHHHHHhcC----------CEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEE-E
Q 035870 618 VSLLIEKAR-VSKGQEVLEIGCGWGTLAIEIVKRTG----------CKYTGITLSEEQLKYAEMKVKEAGLQDLIRLY-L 685 (842)
Q Consensus 618 ~~~l~~~l~-~~~~~~vLDiGcG~G~~~~~la~~~~----------~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~-~ 685 (842)
+..+.+... ++++.+|||||||+|.++..+++..+ .+|+|+|+|+.+ .+ .+++++ .
T Consensus 10 l~~l~~~~~~~~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~-----------~~-~~~~~~~~ 77 (196)
T 2nyu_A 10 LLEVNERHQILRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF-----------PL-EGATFLCP 77 (196)
T ss_dssp HHHHHHHHCCCCTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC-----------CC-TTCEEECS
T ss_pred HHHHHHhcCCCCCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc-----------cC-CCCeEEEe
Confidence 334444444 57899999999999999999999843 799999999842 22 368999 9
Q ss_pred ccccCCc---------cCCCccEEEEcchhhhcChh--h-------HHHHHHHHHhccccCcEEEEEeec
Q 035870 686 CDYRQLA---------KANKYDRIISCEMIEAVGHE--F-------MEEFFGCCESLLAEDGLLVLQFIS 737 (842)
Q Consensus 686 ~d~~~~~---------~~~~fD~i~s~~~~~~~~~~--~-------~~~~~~~~~~~LkpgG~~~~~~~~ 737 (842)
+|+.+.. ++++||+|+|..+++..+.. + ...+++++.++|||||++++..+.
T Consensus 78 ~d~~~~~~~~~~~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~ 147 (196)
T 2nyu_A 78 ADVTDPRTSQRILEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWA 147 (196)
T ss_dssp CCTTSHHHHHHHHHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred ccCCCHHHHHHHHHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecC
Confidence 9976643 23589999997655433211 0 147899999999999999997653
No 293
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=99.12 E-value=5.6e-10 Score=124.92 Aligned_cols=59 Identities=20% Similarity=0.274 Sum_probs=51.7
Q ss_pred ChhHHHHHHHHHhhhcCceEEeCCCeeEEEeCCCc-EEEEeCCCcEEeCCEEEEccChHH
Q 035870 213 RSHSYVNKVRKQLESWGCQIRTSSEVCSVLPADKG-CTIVCGDGSREFYNSCVMALHAPD 271 (842)
Q Consensus 213 G~~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~-v~V~~~~G~~~~ad~VV~A~p~~~ 271 (842)
....+.+.|.+.+++.|++|+++++|++|..++++ +.|++.+|+++.||.||+|+....
T Consensus 132 ~~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~~~~v~~V~~~~G~~i~Ad~VVlAtGg~s 191 (447)
T 2i0z_A 132 KAQSVVDALLTRLKDLGVKIRTNTPVETIEYENGQTKAVILQTGEVLETNHVVIAVGGKS 191 (447)
T ss_dssp CHHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTCCEEECSCEEECCCCSS
T ss_pred CHHHHHHHHHHHHHHCCCEEEeCcEEEEEEecCCcEEEEEECCCCEEECCEEEECCCCCc
Confidence 35688899999999999999999999999987777 789999997799999999987653
No 294
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=99.11 E-value=3.9e-10 Score=122.57 Aligned_cols=120 Identities=15% Similarity=0.192 Sum_probs=97.5
Q ss_pred HHHHHHHHcCCCCCCeEEEeccCchHHHHHHHHh-cC--------------------------------------CEEEE
Q 035870 617 KVSLLIEKARVSKGQEVLEIGCGWGTLAIEIVKR-TG--------------------------------------CKYTG 657 (842)
Q Consensus 617 ~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~la~~-~~--------------------------------------~~v~g 657 (842)
....++......++.+|||.+||+|.+++.+|.. .+ .+|+|
T Consensus 189 lAa~ll~l~~~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~G 268 (393)
T 3k0b_A 189 MAAALVLLTSWHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIG 268 (393)
T ss_dssp HHHHHHHHSCCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEE
T ss_pred HHHHHHHHhCCCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEE
Confidence 3346777888889999999999999999999876 22 46999
Q ss_pred EcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCccCCCccEEEEcchhh-hcCh-hhHHHHHHHHHhcccc--CcEEEE
Q 035870 658 ITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLAKANKYDRIISCEMIE-AVGH-EFMEEFFGCCESLLAE--DGLLVL 733 (842)
Q Consensus 658 id~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~~~fD~i~s~~~~~-~~~~-~~~~~~~~~~~~~Lkp--gG~~~~ 733 (842)
+|+|+.+++.|+++++.+|+.++++++++|+.+++..++||+|+++..+. .+++ +.+..+++.+.+.||+ ||.+++
T Consensus 269 vDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~~~~~~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~i 348 (393)
T 3k0b_A 269 GDIDARLIEIAKQNAVEAGLGDLITFRQLQVADFQTEDEYGVVVANPPYGERLEDEEAVRQLYREMGIVYKRMPTWSVYV 348 (393)
T ss_dssp EESCHHHHHHHHHHHHHTTCTTCSEEEECCGGGCCCCCCSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTCTTCEEEE
T ss_pred EECCHHHHHHHHHHHHHcCCCCceEEEECChHhCCCCCCCCEEEECCCCccccCCchhHHHHHHHHHHHHhcCCCCEEEE
Confidence 99999999999999999999888999999999988556999999997642 2322 3456677777777776 888887
Q ss_pred Eee
Q 035870 734 QFI 736 (842)
Q Consensus 734 ~~~ 736 (842)
.+.
T Consensus 349 it~ 351 (393)
T 3k0b_A 349 LTS 351 (393)
T ss_dssp EEC
T ss_pred EEC
Confidence 543
No 295
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=99.09 E-value=8.3e-10 Score=119.33 Aligned_cols=119 Identities=14% Similarity=0.186 Sum_probs=98.4
Q ss_pred HHHHHHHcCCCCCCeEEEeccCchHHHHHHHHh-cC--------------------------------------CEEEEE
Q 035870 618 VSLLIEKARVSKGQEVLEIGCGWGTLAIEIVKR-TG--------------------------------------CKYTGI 658 (842)
Q Consensus 618 ~~~l~~~l~~~~~~~vLDiGcG~G~~~~~la~~-~~--------------------------------------~~v~gi 658 (842)
...|+.....+++..|||.+||+|.+++.+|.. .+ .+|+|+
T Consensus 183 Aaall~l~~~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~Gv 262 (384)
T 3ldg_A 183 AAAIILLSNWFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISGF 262 (384)
T ss_dssp HHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEE
T ss_pred HHHHHHHhCCCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEEE
Confidence 345677788889999999999999999999875 22 469999
Q ss_pred cCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCccCCCccEEEEcchhh-hcC-hhhHHHHHHHHHhcccc--CcEEEEE
Q 035870 659 TLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLAKANKYDRIISCEMIE-AVG-HEFMEEFFGCCESLLAE--DGLLVLQ 734 (842)
Q Consensus 659 d~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~~~fD~i~s~~~~~-~~~-~~~~~~~~~~~~~~Lkp--gG~~~~~ 734 (842)
|+|+.+++.|+++++.+|+.++++++++|+.+++..++||+|+++..+. -++ .+....+++++.+.||+ ||.+++.
T Consensus 263 Did~~al~~Ar~Na~~~gl~~~I~~~~~D~~~l~~~~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk~~~g~~~~ii 342 (384)
T 3ldg_A 263 DFDGRMVEIARKNAREVGLEDVVKLKQMRLQDFKTNKINGVLISNPPYGERLLDDKAVDILYNEMGETFAPLKTWSQFIL 342 (384)
T ss_dssp ESCHHHHHHHHHHHHHTTCTTTEEEEECCGGGCCCCCCSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHTTCTTSEEEEE
T ss_pred ECCHHHHHHHHHHHHHcCCCCceEEEECChHHCCccCCcCEEEECCchhhccCCHHHHHHHHHHHHHHHhhCCCcEEEEE
Confidence 9999999999999999999888999999999988556999999997653 233 24567788888888876 8888875
Q ss_pred ee
Q 035870 735 FI 736 (842)
Q Consensus 735 ~~ 736 (842)
+.
T Consensus 343 t~ 344 (384)
T 3ldg_A 343 TN 344 (384)
T ss_dssp ES
T ss_pred EC
Confidence 43
No 296
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=99.09 E-value=7e-10 Score=121.87 Aligned_cols=100 Identities=16% Similarity=0.256 Sum_probs=83.9
Q ss_pred CCCCCeEEEeccCchHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCccCCCccEEEEcchh
Q 035870 627 VSKGQEVLEIGCGWGTLAIEIVKRTGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLAKANKYDRIISCEMI 706 (842)
Q Consensus 627 ~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~~~fD~i~s~~~~ 706 (842)
+.++.+|||+|||+|.++..+|+. +.+|+|+|+|+++++.|+++++.+++. ++++++|+.++.+. +||+|++...-
T Consensus 288 ~~~~~~VLDlgcG~G~~sl~la~~-~~~V~gvD~s~~ai~~A~~n~~~ngl~--v~~~~~d~~~~~~~-~fD~Vv~dPPr 363 (425)
T 2jjq_A 288 LVEGEKILDMYSGVGTFGIYLAKR-GFNVKGFDSNEFAIEMARRNVEINNVD--AEFEVASDREVSVK-GFDTVIVDPPR 363 (425)
T ss_dssp HCCSSEEEEETCTTTHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHTCC--EEEEECCTTTCCCT-TCSEEEECCCT
T ss_pred cCCCCEEEEeeccchHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHHcCCc--EEEEECChHHcCcc-CCCEEEEcCCc
Confidence 467889999999999999999987 789999999999999999999998885 99999999988643 89999997664
Q ss_pred hhcChhhHHHHHHHHHhccccCcEEEEEe
Q 035870 707 EAVGHEFMEEFFGCCESLLAEDGLLVLQF 735 (842)
Q Consensus 707 ~~~~~~~~~~~~~~~~~~LkpgG~~~~~~ 735 (842)
.... ..+++.+. .|+|+|.++++.
T Consensus 364 ~g~~----~~~~~~l~-~l~p~givyvsc 387 (425)
T 2jjq_A 364 AGLH----PRLVKRLN-REKPGVIVYVSC 387 (425)
T ss_dssp TCSC----HHHHHHHH-HHCCSEEEEEES
T ss_pred cchH----HHHHHHHH-hcCCCcEEEEEC
Confidence 3222 34556555 489999999853
No 297
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=99.09 E-value=3.8e-10 Score=122.52 Aligned_cols=119 Identities=18% Similarity=0.236 Sum_probs=98.3
Q ss_pred HHHHHHHHcCCCCCCeEEEeccCchHHHHHHHHh-cC--------------------------------------CEEEE
Q 035870 617 KVSLLIEKARVSKGQEVLEIGCGWGTLAIEIVKR-TG--------------------------------------CKYTG 657 (842)
Q Consensus 617 ~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~la~~-~~--------------------------------------~~v~g 657 (842)
....|+......++.+|||++||+|.+++.+|.. .+ .+|+|
T Consensus 183 lAa~ll~~~~~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~G 262 (385)
T 3ldu_A 183 LAAGLIYLTPWKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYG 262 (385)
T ss_dssp HHHHHHHTSCCCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEE
T ss_pred HHHHHHHhhCCCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEE
Confidence 3345777788889999999999999999999876 11 57999
Q ss_pred EcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCccCCCccEEEEcchhh-hcC-hhhHHHHHHHHHhcccc--CcEEEE
Q 035870 658 ITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLAKANKYDRIISCEMIE-AVG-HEFMEEFFGCCESLLAE--DGLLVL 733 (842)
Q Consensus 658 id~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~~~fD~i~s~~~~~-~~~-~~~~~~~~~~~~~~Lkp--gG~~~~ 733 (842)
+|+|+.+++.|++++..+|+.+++++.++|+.+++..++||+|+++..+. .++ .+....+++++.+.||+ |+.+++
T Consensus 263 vDid~~ai~~Ar~Na~~~gl~~~i~~~~~D~~~l~~~~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~i 342 (385)
T 3ldu_A 263 YDIDEESIDIARENAEIAGVDEYIEFNVGDATQFKSEDEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRKLKNWSYYL 342 (385)
T ss_dssp EESCHHHHHHHHHHHHHHTCGGGEEEEECCGGGCCCSCBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTSBSCEEEE
T ss_pred EECCHHHHHHHHHHHHHcCCCCceEEEECChhhcCcCCCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHhhCCCCEEEE
Confidence 99999999999999999999888999999999988557999999998753 333 23467788888888876 888877
Q ss_pred Ee
Q 035870 734 QF 735 (842)
Q Consensus 734 ~~ 735 (842)
.+
T Consensus 343 it 344 (385)
T 3ldu_A 343 IT 344 (385)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 298
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.09 E-value=7.2e-10 Score=122.91 Aligned_cols=131 Identities=15% Similarity=0.232 Sum_probs=98.5
Q ss_pred CCCCcccccccCCCcccHHHHHHHHHHHHHHHcCCCCCCeEEEeccCchHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHH
Q 035870 593 DESMTYSCAVFKSEDEDLKAAQMRKVSLLIEKARVSKGQEVLEIGCGWGTLAIEIVKRTGCKYTGITLSEEQLKYAEMKV 672 (842)
Q Consensus 593 ~~~~~ys~~~~~~~~~~l~~aq~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~ 672 (842)
+..+.++.+.|-..... .....++.+++.+...++.+|||+|||+|.++..+++. +.+|+|+|+|+++++.|++++
T Consensus 253 g~~~~~~~~~f~q~n~~---~~e~l~~~~~~~l~~~~~~~VLDlgcG~G~~~~~la~~-~~~V~gvD~s~~al~~A~~n~ 328 (433)
T 1uwv_A 253 GLRLTFSPRDFIQVNAG---VNQKMVARALEWLDVQPEDRVLDLFCGMGNFTLPLATQ-AASVVGVEGVPALVEKGQQNA 328 (433)
T ss_dssp TEEEECCSSSCCCSBHH---HHHHHHHHHHHHHTCCTTCEEEEESCTTTTTHHHHHTT-SSEEEEEESCHHHHHHHHHHH
T ss_pred CEEEEECcccccccCHH---HHHHHHHHHHHhhcCCCCCEEEECCCCCCHHHHHHHhh-CCEEEEEeCCHHHHHHHHHHH
Confidence 33444555444332211 22345567777788888899999999999999999998 889999999999999999999
Q ss_pred HHcCCCCCeEEEEccccCC----c-cCCCccEEEEcchhhhcChhhHHHHHHHHHhccccCcEEEEE
Q 035870 673 KEAGLQDLIRLYLCDYRQL----A-KANKYDRIISCEMIEAVGHEFMEEFFGCCESLLAEDGLLVLQ 734 (842)
Q Consensus 673 ~~~~l~~~v~~~~~d~~~~----~-~~~~fD~i~s~~~~~~~~~~~~~~~~~~~~~~LkpgG~~~~~ 734 (842)
+.+++. +++++++|+.+. + .+++||+|+++....-. ..+++.+.+ ++|++.++++
T Consensus 329 ~~~~~~-~v~f~~~d~~~~l~~~~~~~~~fD~Vv~dPPr~g~-----~~~~~~l~~-~~p~~ivyvs 388 (433)
T 1uwv_A 329 RLNGLQ-NVTFYHENLEEDVTKQPWAKNGFDKVLLDPARAGA-----AGVMQQIIK-LEPIRIVYVS 388 (433)
T ss_dssp HHTTCC-SEEEEECCTTSCCSSSGGGTTCCSEEEECCCTTCC-----HHHHHHHHH-HCCSEEEEEE
T ss_pred HHcCCC-ceEEEECCHHHHhhhhhhhcCCCCEEEECCCCccH-----HHHHHHHHh-cCCCeEEEEE
Confidence 999987 899999998873 2 34689999997654322 244555544 7898888874
No 299
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=99.07 E-value=1.6e-09 Score=119.87 Aligned_cols=53 Identities=13% Similarity=0.056 Sum_probs=46.5
Q ss_pred HHHHHHHHHhhhcCceEEeCCCeeEEEeCCCcEEEEeCCCcEEeCCEEEEccChH
Q 035870 216 SYVNKVRKQLESWGCQIRTSSEVCSVLPADKGCTIVCGDGSREFYNSCVMALHAP 270 (842)
Q Consensus 216 ~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VV~A~p~~ 270 (842)
.+.+.|.+.+++ ++|+++++|++|+.++++|.|++.+|+++.||.||.|....
T Consensus 128 ~l~~~L~~~~~~--~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~a~~vV~AdG~~ 180 (407)
T 3rp8_A 128 ELQREMLDYWGR--DSVQFGKRVTRCEEDADGVTVWFTDGSSASGDLLIAADGSH 180 (407)
T ss_dssp HHHHHHHHHHCG--GGEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECCCTT
T ss_pred HHHHHHHHhCCc--CEEEECCEEEEEEecCCcEEEEEcCCCEEeeCEEEECCCcC
Confidence 566777777765 89999999999999999999999999999999999997643
No 300
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=99.06 E-value=1.4e-10 Score=118.87 Aligned_cols=99 Identities=16% Similarity=-0.005 Sum_probs=82.0
Q ss_pred CCCCeEEEeccCchHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHH--cCC-CCCeEEEEccccCCccCCCccEEEEcc
Q 035870 628 SKGQEVLEIGCGWGTLAIEIVKRTGCKYTGITLSEEQLKYAEMKVKE--AGL-QDLIRLYLCDYRQLAKANKYDRIISCE 704 (842)
Q Consensus 628 ~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~--~~l-~~~v~~~~~d~~~~~~~~~fD~i~s~~ 704 (842)
+.+.+|||||||+|.++..+++. +.+|+++|+|+++++.|++++.. .++ .++++++.+|..+.. ++||+|++..
T Consensus 71 ~~~~~VL~iG~G~G~~~~~ll~~-~~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~--~~fD~Ii~d~ 147 (262)
T 2cmg_A 71 KELKEVLIVDGFDLELAHQLFKY-DTHIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI--KKYDLIFCLQ 147 (262)
T ss_dssp SCCCEEEEESSCCHHHHHHHTTS-SCEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC--CCEEEEEESS
T ss_pred CCCCEEEEEeCCcCHHHHHHHhC-CCEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH--hhCCEEEECC
Confidence 45679999999999999999988 58999999999999999987532 112 248999999998876 7899999862
Q ss_pred hhhhcChhhHHHHHHHHHhccccCcEEEEEee
Q 035870 705 MIEAVGHEFMEEFFGCCESLLAEDGLLVLQFI 736 (842)
Q Consensus 705 ~~~~~~~~~~~~~~~~~~~~LkpgG~~~~~~~ 736 (842)
.+ +..+++.++++|||||.++++..
T Consensus 148 -----~d--p~~~~~~~~~~L~pgG~lv~~~~ 172 (262)
T 2cmg_A 148 -----EP--DIHRIDGLKRMLKEDGVFISVAK 172 (262)
T ss_dssp -----CC--CHHHHHHHHTTEEEEEEEEEEEE
T ss_pred -----CC--hHHHHHHHHHhcCCCcEEEEEcC
Confidence 22 34589999999999999999743
No 301
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=99.05 E-value=1.2e-09 Score=113.28 Aligned_cols=88 Identities=23% Similarity=0.267 Sum_probs=77.5
Q ss_pred HHHHHHHHHcCCCCCCeEEEeccCchHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCc-cC
Q 035870 616 RKVSLLIEKARVSKGQEVLEIGCGWGTLAIEIVKRTGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLA-KA 694 (842)
Q Consensus 616 ~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~-~~ 694 (842)
..++.+++.+.+.++++|||||||+|.++..+++. +.+|+++|+|+++++.+++++... ++++++++|+.+++ ++
T Consensus 37 ~i~~~Iv~~l~~~~~~~VLEIG~G~G~lT~~La~~-~~~V~aVEid~~li~~a~~~~~~~---~~v~vi~gD~l~~~~~~ 112 (295)
T 3gru_A 37 NFVNKAVESANLTKDDVVLEIGLGKGILTEELAKN-AKKVYVIEIDKSLEPYANKLKELY---NNIEIIWGDALKVDLNK 112 (295)
T ss_dssp HHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH-SSEEEEEESCGGGHHHHHHHHHHC---SSEEEEESCTTTSCGGG
T ss_pred HHHHHHHHhcCCCCcCEEEEECCCchHHHHHHHhc-CCEEEEEECCHHHHHHHHHHhccC---CCeEEEECchhhCCccc
Confidence 45678889999999999999999999999999998 889999999999999999998743 38999999999877 55
Q ss_pred CCccEEEEcchhh
Q 035870 695 NKYDRIISCEMIE 707 (842)
Q Consensus 695 ~~fD~i~s~~~~~ 707 (842)
.+||+|+++..++
T Consensus 113 ~~fD~Iv~NlPy~ 125 (295)
T 3gru_A 113 LDFNKVVANLPYQ 125 (295)
T ss_dssp SCCSEEEEECCGG
T ss_pred CCccEEEEeCccc
Confidence 6899999986544
No 302
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=99.05 E-value=2.4e-10 Score=127.45 Aligned_cols=121 Identities=12% Similarity=0.121 Sum_probs=98.5
Q ss_pred HHHHHHHHHcCCCCCCeEEEeccCchHHHHHHHHh--------------cCCEEEEEcCCHHHHHHHHHHHHHcCCCC-C
Q 035870 616 RKVSLLIEKARVSKGQEVLEIGCGWGTLAIEIVKR--------------TGCKYTGITLSEEQLKYAEMKVKEAGLQD-L 680 (842)
Q Consensus 616 ~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~la~~--------------~~~~v~gid~s~~~~~~a~~~~~~~~l~~-~ 680 (842)
..++.|++.+...++.+|||.|||+|.++..+++. .+.+++|+|+++.+++.|+.++...|+.. +
T Consensus 158 ~v~~~mv~~l~~~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g~~~~~ 237 (445)
T 2okc_A 158 PLIQAMVDCINPQMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGIGTDR 237 (445)
T ss_dssp HHHHHHHHHHCCCTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTCCSSC
T ss_pred HHHHHHHHHhCCCCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhCCCcCC
Confidence 34556777777788999999999999999998875 24689999999999999999998888753 6
Q ss_pred eEEEEccccCCccCCCccEEEEcchhhhcChh---------------hHHHHHHHHHhccccCcEEEEEee
Q 035870 681 IRLYLCDYRQLAKANKYDRIISCEMIEAVGHE---------------FMEEFFGCCESLLAEDGLLVLQFI 736 (842)
Q Consensus 681 v~~~~~d~~~~~~~~~fD~i~s~~~~~~~~~~---------------~~~~~~~~~~~~LkpgG~~~~~~~ 736 (842)
+++.++|....+..++||+|+++..+.+.... ....+++.+.++|||||++++...
T Consensus 238 ~~i~~gD~l~~~~~~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~p 308 (445)
T 2okc_A 238 SPIVCEDSLEKEPSTLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVVLP 308 (445)
T ss_dssp CSEEECCTTTSCCSSCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCEeeCCCCCCcccCCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEEEC
Confidence 78999998877644589999999887764321 124789999999999999988653
No 303
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=99.04 E-value=7.8e-11 Score=123.65 Aligned_cols=116 Identities=14% Similarity=0.176 Sum_probs=81.8
Q ss_pred HHHHHHHHcCCCCCCeEEEeccCchHHHHHHHHhcCCEEEEEcC----CHHHHHHHHHHHHHcCCCCCeEEEEc-cccCC
Q 035870 617 KVSLLIEKARVSKGQEVLEIGCGWGTLAIEIVKRTGCKYTGITL----SEEQLKYAEMKVKEAGLQDLIRLYLC-DYRQL 691 (842)
Q Consensus 617 ~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~----s~~~~~~a~~~~~~~~l~~~v~~~~~-d~~~~ 691 (842)
|+..+.++..++++.+|||||||+|.++..+++. .+|+|+|+ ++.+++.+. .+..+. ++|+++++ |+.++
T Consensus 70 KL~~i~~~~~~~~g~~VLDlGcG~G~~s~~la~~--~~V~gvD~~~~~~~~~~~~~~--~~~~~~-~~v~~~~~~D~~~l 144 (305)
T 2p41_A 70 KLRWFVERNLVTPEGKVVDLGCGRGGWSYYCGGL--KNVREVKGLTKGGPGHEEPIP--MSTYGW-NLVRLQSGVDVFFI 144 (305)
T ss_dssp HHHHHHHTTSSCCCEEEEEETCTTSHHHHHHHTS--TTEEEEEEECCCSTTSCCCCC--CCSTTG-GGEEEECSCCTTTS
T ss_pred HHHHHHHcCCCCCCCEEEEEcCCCCHHHHHHHhc--CCEEEEeccccCchhHHHHHH--hhhcCC-CCeEEEeccccccC
Confidence 3445555544678999999999999999999987 58999999 564442211 111121 37999999 98887
Q ss_pred ccCCCccEEEEcchhh---hcChhh-HHHHHHHHHhccccCcEEEEEeecC
Q 035870 692 AKANKYDRIISCEMIE---AVGHEF-MEEFFGCCESLLAEDGLLVLQFISI 738 (842)
Q Consensus 692 ~~~~~fD~i~s~~~~~---~~~~~~-~~~~~~~~~~~LkpgG~~~~~~~~~ 738 (842)
+ .++||+|+|..++. +..+.. ...+++.+.++|||||.+++..+..
T Consensus 145 ~-~~~fD~V~sd~~~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~kv~~~ 194 (305)
T 2p41_A 145 P-PERCDTLLCDIGESSPNPTVEAGRTLRVLNLVENWLSNNTQFCVKVLNP 194 (305)
T ss_dssp C-CCCCSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCEEEEEESCC
T ss_pred C-cCCCCEEEECCccccCcchhhHHHHHHHHHHHHHHhCCCCEEEEEeCCC
Confidence 5 46899999976653 211110 1157899999999999999865543
No 304
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.02 E-value=2.8e-09 Score=117.09 Aligned_cols=57 Identities=14% Similarity=0.159 Sum_probs=49.4
Q ss_pred ChhHHHHHHHHHhhhcCceEEeCCCeeEEEeC----CCcEEEEeCCCcEEeCCEEEEccChH
Q 035870 213 RSHSYVNKVRKQLESWGCQIRTSSEVCSVLPA----DKGCTIVCGDGSREFYNSCVMALHAP 270 (842)
Q Consensus 213 G~~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~----~~~v~V~~~~G~~~~ad~VV~A~p~~ 270 (842)
....+.+.|.+.+++.|++|+++++|++|..+ ++++.|++.+| ++.||.||+|+...
T Consensus 107 ~~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~~~~~v~~~~g-~i~ad~VVlAtG~~ 167 (401)
T 2gqf_A 107 GAEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEKVRFVLQVNST-QWQCKNLIVATGGL 167 (401)
T ss_dssp CTHHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSSCCEEEEETTE-EEEESEEEECCCCS
T ss_pred CHHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCCCeEEEEECCC-EEECCEEEECCCCc
Confidence 45678888999998899999999999999987 66789988877 79999999998654
No 305
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=99.02 E-value=4.6e-09 Score=110.19 Aligned_cols=117 Identities=14% Similarity=0.069 Sum_probs=90.4
Q ss_pred HHHHcCCCCCCeEEEeccCchHHHHHHHHh--cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCccC----
Q 035870 621 LIEKARVSKGQEVLEIGCGWGTLAIEIVKR--TGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLAKA---- 694 (842)
Q Consensus 621 l~~~l~~~~~~~vLDiGcG~G~~~~~la~~--~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~---- 694 (842)
+...+.+++|++|||+|||+|+.+.++|+. ...+|+++|+|+.+++.++++++..|+. +++++++|+.++...
T Consensus 94 ~~~~l~~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~~-~v~~~~~D~~~~~~~~~~~ 172 (309)
T 2b9e_A 94 PAMLLDPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVS-CCELAEEDFLAVSPSDPRY 172 (309)
T ss_dssp HHHHHCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEECCGGGSCTTCGGG
T ss_pred HHHHhCCCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCC-eEEEEeCChHhcCcccccc
Confidence 345667889999999999999999999986 2479999999999999999999999985 799999999887621
Q ss_pred CCccEEEEc------chhhhcCh---------h-------hHHHHHHHHHhccccCcEEEEEeecCC
Q 035870 695 NKYDRIISC------EMIEAVGH---------E-------FMEEFFGCCESLLAEDGLLVLQFISIP 739 (842)
Q Consensus 695 ~~fD~i~s~------~~~~~~~~---------~-------~~~~~~~~~~~~LkpgG~~~~~~~~~~ 739 (842)
++||.|++. +++..-++ + ...++++.+.++|+ ||+++..+++..
T Consensus 173 ~~fD~Vl~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsTCs~~ 238 (309)
T 2b9e_A 173 HEVHYILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYSTCSLC 238 (309)
T ss_dssp TTEEEEEECCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEESCCC
T ss_pred CCCCEEEEcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEECCCCC
Confidence 579999973 23322111 1 12356778888887 999998887754
No 306
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=99.01 E-value=6e-10 Score=113.45 Aligned_cols=85 Identities=22% Similarity=0.360 Sum_probs=71.2
Q ss_pred HHHHHHHHHcCCCCCCeEEEeccCchHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCc-c-
Q 035870 616 RKVSLLIEKARVSKGQEVLEIGCGWGTLAIEIVKRTGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLA-K- 693 (842)
Q Consensus 616 ~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~-~- 693 (842)
...+.+++.+.+.++.+|||||||+|.++..+++. +.+|+|+|+|+++++.+++++... ++++++++|+.+++ +
T Consensus 17 ~~~~~i~~~~~~~~~~~VLDiG~G~G~lt~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~---~~v~~~~~D~~~~~~~~ 92 (244)
T 1qam_A 17 HNIDKIMTNIRLNEHDNIFEIGSGKGHFTLELVQR-CNFVTAIEIDHKLCKTTENKLVDH---DNFQVLNKDILQFKFPK 92 (244)
T ss_dssp HHHHHHHTTCCCCTTCEEEEECCTTSHHHHHHHHH-SSEEEEECSCHHHHHHHHHHTTTC---CSEEEECCCGGGCCCCS
T ss_pred HHHHHHHHhCCCCCCCEEEEEeCCchHHHHHHHHc-CCeEEEEECCHHHHHHHHHhhccC---CCeEEEEChHHhCCccc
Confidence 45567888888889999999999999999999998 689999999999999999987542 48999999999887 3
Q ss_pred CCCccEEEEcch
Q 035870 694 ANKYDRIISCEM 705 (842)
Q Consensus 694 ~~~fD~i~s~~~ 705 (842)
...| .|+++..
T Consensus 93 ~~~~-~vv~nlP 103 (244)
T 1qam_A 93 NQSY-KIFGNIP 103 (244)
T ss_dssp SCCC-EEEEECC
T ss_pred CCCe-EEEEeCC
Confidence 2455 5666643
No 307
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=99.01 E-value=4.7e-09 Score=115.67 Aligned_cols=53 Identities=13% Similarity=0.056 Sum_probs=44.2
Q ss_pred HHHHHHHHHhhhcCceEEeCCCeeEEEeCCCcEEEEeCCCcEEeCCEEEEccChH
Q 035870 216 SYVNKVRKQLESWGCQIRTSSEVCSVLPADKGCTIVCGDGSREFYNSCVMALHAP 270 (842)
Q Consensus 216 ~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VV~A~p~~ 270 (842)
.+.+.|.+.+. |++|+++++|++|+.++++|.|++.+|+++.||.||.|....
T Consensus 100 ~l~~~L~~~~~--~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~ 152 (397)
T 2vou_A 100 SIYGGLYELFG--PERYHTSKCLVGLSQDSETVQMRFSDGTKAEANWVIGADGGA 152 (397)
T ss_dssp HHHHHHHHHHC--STTEETTCCEEEEEECSSCEEEEETTSCEEEESEEEECCCTT
T ss_pred HHHHHHHHhCC--CcEEEcCCEEEEEEecCCEEEEEECCCCEEECCEEEECCCcc
Confidence 34445555553 889999999999999999999999999899999999997654
No 308
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=99.01 E-value=1.6e-09 Score=119.36 Aligned_cols=61 Identities=7% Similarity=-0.049 Sum_probs=47.5
Q ss_pred HHHHHHHHHhhhcCceEEeCCCeeEEEeCCCcEE-EEe---CCCcEEeCCEEEEccChHH-HHHhh
Q 035870 216 SYVNKVRKQLESWGCQIRTSSEVCSVLPADKGCT-IVC---GDGSREFYNSCVMALHAPD-ALKIL 276 (842)
Q Consensus 216 ~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v~-V~~---~~G~~~~ad~VV~A~p~~~-~~~ll 276 (842)
.+.+.|.+.+++.|++|+++++|++|..+++++. |++ .++.++.||.||.|...+. +.+.+
T Consensus 103 ~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~a~~vV~A~G~~s~~~~~~ 168 (397)
T 3cgv_A 103 KFDKHLAALAAKAGADVWVKSPALGVIKENGKVAGAKIRHNNEIVDVRAKMVIAADGFESEFGRWA 168 (397)
T ss_dssp HHHHHHHHHHHHHTCEEESSCCEEEEEEETTEEEEEEEEETTEEEEEEEEEEEECCCTTCHHHHHH
T ss_pred HHHHHHHHHHHhCCCEEEECCEEEEEEEeCCEEEEEEEEECCeEEEEEcCEEEECCCcchHhHHhc
Confidence 5667777777778999999999999999888775 766 3556899999999986543 33444
No 309
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=99.00 E-value=1.6e-09 Score=119.22 Aligned_cols=37 Identities=32% Similarity=0.474 Sum_probs=34.7
Q ss_pred cEEEECCChHHHHHHHHHHhCCCeEEEEecCCCCCCC
Q 035870 2 RVAVIGAGISGLVSAYVLAKAGVEVVLYEKDDYLGGH 38 (842)
Q Consensus 2 dV~IIGaGiaGLsaA~~L~~~G~~V~VlEa~~~~GG~ 38 (842)
||+|||||+|||+||+.|+++|++|+|||+++.+|..
T Consensus 6 DViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~~~~~ 42 (397)
T 3oz2_A 6 DVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSP 42 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCCC
Confidence 7999999999999999999999999999998887753
No 310
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=98.99 E-value=7.8e-10 Score=125.21 Aligned_cols=57 Identities=19% Similarity=0.232 Sum_probs=50.0
Q ss_pred hHHHHHHHHHhhhcCceEEeCCCeeEEEeCCCcE-EEEeCCCcEEeCCEEEEccChHH
Q 035870 215 HSYVNKVRKQLESWGCQIRTSSEVCSVLPADKGC-TIVCGDGSREFYNSCVMALHAPD 271 (842)
Q Consensus 215 ~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v-~V~~~~G~~~~ad~VV~A~p~~~ 271 (842)
..+.+.|.+.+++.|++|+++++|++|..+++++ .|++.+|+++.||.||+|+....
T Consensus 220 ~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~~~~~v~gV~l~~G~~i~Ad~VVlA~G~~s 277 (549)
T 3nlc_A 220 VTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSNGEEIKSRHVVLAVGHSA 277 (549)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCCEEEEEESSSBEEEEEETTSCEEECSCEEECCCTTC
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEEeCCEEEEEEECCCCEEECCEEEECCCCCh
Confidence 4678888888888899999999999999988875 58899998999999999987653
No 311
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=98.99 E-value=3.6e-09 Score=127.81 Aligned_cols=57 Identities=19% Similarity=0.088 Sum_probs=50.8
Q ss_pred hhHHHHHHHHHhhhcCceEEeCCCeeEEEeCCCcE-EEEeCCCcEEeCCEEEEccChHH
Q 035870 214 SHSYVNKVRKQLESWGCQIRTSSEVCSVLPADKGC-TIVCGDGSREFYNSCVMALHAPD 271 (842)
Q Consensus 214 ~~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v-~V~~~~G~~~~ad~VV~A~p~~~ 271 (842)
...++..|++.++++|++|+++++|++|..+++++ .|++.+| ++.||+||+|+..+.
T Consensus 150 p~~l~~~L~~~a~~~Gv~i~~~t~V~~i~~~~~~v~~V~t~~G-~i~Ad~VV~AaG~~s 207 (830)
T 1pj5_A 150 AARAVQLLIKRTESAGVTYRGSTTVTGIEQSGGRVTGVQTADG-VIPADIVVSCAGFWG 207 (830)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTE-EEECSEEEECCGGGH
T ss_pred HHHHHHHHHHHHHHcCCEEECCceEEEEEEeCCEEEEEEECCc-EEECCEEEECCccch
Confidence 45799999999999999999999999999988876 6888887 799999999998875
No 312
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=98.99 E-value=1.5e-09 Score=120.34 Aligned_cols=50 Identities=22% Similarity=0.164 Sum_probs=40.5
Q ss_pred HHHHHHHHHhhhcCceEEeCCCeeEEEeCCC-cEEEEeCCCcEEeCCEEEEccC
Q 035870 216 SYVNKVRKQLESWGCQIRTSSEVCSVLPADK-GCTIVCGDGSREFYNSCVMALH 268 (842)
Q Consensus 216 ~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~-~v~V~~~~G~~~~ad~VV~A~p 268 (842)
.|-+.|.+.+ +.+|+++++|++++..++ +|+|+++||++++||.||-|-.
T Consensus 113 ~L~~~L~~~~---~~~v~~~~~v~~~~~~~~~~v~v~~~dG~~~~adlvVgADG 163 (412)
T 4hb9_A 113 ELKEILNKGL---ANTIQWNKTFVRYEHIENGGIKIFFADGSHENVDVLVGADG 163 (412)
T ss_dssp HHHHHHHTTC---TTTEECSCCEEEEEECTTSCEEEEETTSCEEEESEEEECCC
T ss_pred HHHHHHHhhc---cceEEEEEEEEeeeEcCCCeEEEEECCCCEEEeeEEEECCC
Confidence 3555566655 568999999999988655 5999999999999999999954
No 313
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=98.98 E-value=2.6e-09 Score=123.42 Aligned_cols=56 Identities=11% Similarity=-0.002 Sum_probs=45.8
Q ss_pred hHHHHHHHHHhhhcCceEEeCCCeeEEEeCC-CcE---EEEeCCCc--EEeCCEEEEccChH
Q 035870 215 HSYVNKVRKQLESWGCQIRTSSEVCSVLPAD-KGC---TIVCGDGS--REFYNSCVMALHAP 270 (842)
Q Consensus 215 ~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~-~~v---~V~~~~G~--~~~ad~VV~A~p~~ 270 (842)
..+.+.|.+.+++.|++|+++++|++|..++ ++| .+...+|+ ++.||.||+|+..+
T Consensus 255 ~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~~~g~~~~i~a~~VVlAtGg~ 316 (571)
T 1y0p_A 255 AHVVQVLYDNAVKRNIDLRMNTRGIEVLKDDKGTVKGILVKGMYKGYYWVKADAVILATGGF 316 (571)
T ss_dssp HHHHHHHHHHHHHTTCEEESSEEEEEEEECTTSCEEEEEEEETTTEEEEEECSEEEECCCCC
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEeeEeEEcCCCeEEEEEEEeCCCcEEEEECCeEEEeCCCc
Confidence 5788999999999999999999999999876 553 34443676 68999999998754
No 314
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=98.98 E-value=2.9e-09 Score=122.86 Aligned_cols=57 Identities=18% Similarity=0.159 Sum_probs=46.5
Q ss_pred hhHHHHHHHHHhhhcCceEEeCCCeeEEEeCC-CcE---EEEeCCCc--EEeCCEEEEccChH
Q 035870 214 SHSYVNKVRKQLESWGCQIRTSSEVCSVLPAD-KGC---TIVCGDGS--REFYNSCVMALHAP 270 (842)
Q Consensus 214 ~~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~-~~v---~V~~~~G~--~~~ad~VV~A~p~~ 270 (842)
...+.+.|.+.+++.|++|+++++|++|..++ ++| .+.+.+|+ ++.||.||+|+...
T Consensus 249 ~~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~~~g~~~~i~A~~VVlAtGg~ 311 (566)
T 1qo8_A 249 GPEIIDTLRKAAKEQGIDTRLNSRVVKLVVNDDHSVVGAVVHGKHTGYYMIGAKSVVLATGGY 311 (566)
T ss_dssp HHHHHHHHHHHHHHTTCCEECSEEEEEEEECTTSBEEEEEEEETTTEEEEEEEEEEEECCCCC
T ss_pred HHHHHHHHHHHHHhcCCEEEeCCEEEEEEECCCCcEEEEEEEeCCCcEEEEEcCEEEEecCCc
Confidence 45788999999999999999999999999887 654 33334775 68999999998754
No 315
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=98.97 E-value=2.3e-09 Score=123.04 Aligned_cols=58 Identities=14% Similarity=0.036 Sum_probs=48.8
Q ss_pred hhHHHHHHHHHhhhcCceEEeCCCeeEEEeCCCcE-EEEeCC---C--cEEeCCEEEEccChHH
Q 035870 214 SHSYVNKVRKQLESWGCQIRTSSEVCSVLPADKGC-TIVCGD---G--SREFYNSCVMALHAPD 271 (842)
Q Consensus 214 ~~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v-~V~~~~---G--~~~~ad~VV~A~p~~~ 271 (842)
...++..|++.+.++|++|+.+++|++|..+++++ .|++.+ | .++.||.||+|+.++.
T Consensus 169 ~~~l~~~L~~~a~~~G~~i~~~~~V~~l~~~~g~v~gV~~~d~~tg~~~~i~A~~VV~AaG~~s 232 (561)
T 3da1_A 169 DARLTLEIMKEAVARGAVALNYMKVESFIYDQGKVVGVVAKDRLTDTTHTIYAKKVVNAAGPWV 232 (561)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCeEEEEEEEEcCCCceEEEECCEEEECCCcch
Confidence 46799999999999999999999999999988874 466543 3 3689999999998774
No 316
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=98.96 E-value=1.9e-09 Score=119.89 Aligned_cols=56 Identities=11% Similarity=-0.007 Sum_probs=46.7
Q ss_pred HHHHHHHHHhhhcCceEEeCCCeeEEEeCCCc--EEEEeCCCc--EEeCCEEEEccChHH
Q 035870 216 SYVNKVRKQLESWGCQIRTSSEVCSVLPADKG--CTIVCGDGS--REFYNSCVMALHAPD 271 (842)
Q Consensus 216 ~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~--v~V~~~~G~--~~~ad~VV~A~p~~~ 271 (842)
.+.+.|.+.+++.|++|+++++|++|..++++ +.|.+.+|+ ++.||.||.|+....
T Consensus 107 ~~~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~v~v~~~~g~~~~~~a~~vV~A~G~~s 166 (421)
T 3nix_A 107 NFDKTLADEAARQGVDVEYEVGVTDIKFFGTDSVTTIEDINGNKREIEARFIIDASGYGR 166 (421)
T ss_dssp HHHHHHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEETTSCEEEEEEEEEEECCGGGC
T ss_pred HHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCCEEEEEcCEEEECCCCch
Confidence 56677778887789999999999999998776 467778887 699999999987553
No 317
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.96 E-value=1.9e-09 Score=111.35 Aligned_cols=97 Identities=21% Similarity=0.222 Sum_probs=73.4
Q ss_pred cCCCCCCeEEEecc------CchHHHHHHHHh-c-CCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEE-EEccccCCccCC
Q 035870 625 ARVSKGQEVLEIGC------GWGTLAIEIVKR-T-GCKYTGITLSEEQLKYAEMKVKEAGLQDLIRL-YLCDYRQLAKAN 695 (842)
Q Consensus 625 l~~~~~~~vLDiGc------G~G~~~~~la~~-~-~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~-~~~d~~~~~~~~ 695 (842)
+.++++++|||+|| |+|. ..+++. + +.+|+|+|+|+. + .++++ +++|+.+++..+
T Consensus 59 l~l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~-------------v-~~v~~~i~gD~~~~~~~~ 122 (290)
T 2xyq_A 59 LAVPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF-------------V-SDADSTLIGDCATVHTAN 122 (290)
T ss_dssp CCCCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC-------------B-CSSSEEEESCGGGCCCSS
T ss_pred cCCCCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC-------------C-CCCEEEEECccccCCccC
Confidence 45789999999999 4477 444555 3 579999999997 1 26889 999999887447
Q ss_pred CccEEEEcchhhhc---------ChhhHHHHHHHHHhccccCcEEEEEeec
Q 035870 696 KYDRIISCEMIEAV---------GHEFMEEFFGCCESLLAEDGLLVLQFIS 737 (842)
Q Consensus 696 ~fD~i~s~~~~~~~---------~~~~~~~~~~~~~~~LkpgG~~~~~~~~ 737 (842)
+||+|+|+...+.. ..+.+..+++++.++|||||++++..+.
T Consensus 123 ~fD~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~ 173 (290)
T 2xyq_A 123 KWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITE 173 (290)
T ss_dssp CEEEEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECS
T ss_pred cccEEEEcCCccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEec
Confidence 89999997432211 0123568999999999999999996543
No 318
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=98.96 E-value=1e-09 Score=122.11 Aligned_cols=111 Identities=20% Similarity=0.327 Sum_probs=88.0
Q ss_pred HHHHHHHHcCCCCCCeEEEeccCchHHHHHHHHh--cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCccC
Q 035870 617 KVSLLIEKARVSKGQEVLEIGCGWGTLAIEIVKR--TGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLAKA 694 (842)
Q Consensus 617 ~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~la~~--~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~ 694 (842)
..+.+++.+...++.+|||+|||+|.++..++++ .+.+++|+|+++.+++.| .+++++++|+.+..+.
T Consensus 27 l~~~~~~~~~~~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a----------~~~~~~~~D~~~~~~~ 96 (421)
T 2ih2_A 27 VVDFMVSLAEAPRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP----------PWAEGILADFLLWEPG 96 (421)
T ss_dssp HHHHHHHHCCCCTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC----------TTEEEEESCGGGCCCS
T ss_pred HHHHHHHhhccCCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC----------CCCcEEeCChhhcCcc
Confidence 4456677776666779999999999999999987 468999999999998877 3799999999888766
Q ss_pred CCccEEEEcchhhhc----------Chhh-----------------HHHHHHHHHhccccCcEEEEEeec
Q 035870 695 NKYDRIISCEMIEAV----------GHEF-----------------MEEFFGCCESLLAEDGLLVLQFIS 737 (842)
Q Consensus 695 ~~fD~i~s~~~~~~~----------~~~~-----------------~~~~~~~~~~~LkpgG~~~~~~~~ 737 (842)
++||+|+++..+... .++. ...+++.+.++|||||++++....
T Consensus 97 ~~fD~Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p~ 166 (421)
T 2ih2_A 97 EAFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPA 166 (421)
T ss_dssp SCEEEEEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEEG
T ss_pred CCCCEEEECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEECh
Confidence 799999998554322 1211 236789999999999999886543
No 319
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=98.96 E-value=4.2e-09 Score=116.21 Aligned_cols=62 Identities=13% Similarity=0.029 Sum_probs=52.4
Q ss_pred HHHHHHHHHhhhc-CceEEeCCCeeEEEeCCCcE--EEEeCCCcEEeCCEEEEccChHH-HHHhhc
Q 035870 216 SYVNKVRKQLESW-GCQIRTSSEVCSVLPADKGC--TIVCGDGSREFYNSCVMALHAPD-ALKILG 277 (842)
Q Consensus 216 ~l~~~L~~~l~~~-G~~i~~~~~V~~I~~~~~~v--~V~~~~G~~~~ad~VV~A~p~~~-~~~ll~ 277 (842)
.+.+.|.+.+++. |++|+++++|++|+.++++| .|++.+|+++.||.||.|..... +.+.+.
T Consensus 108 ~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~~~v~g~v~~~~g~~~~ad~vV~AdG~~s~vr~~lg 173 (399)
T 2x3n_A 108 SLRRLVLEKIDGEATVEMLFETRIEAVQRDERHAIDQVRLNDGRVLRPRVVVGADGIASYVRRRLL 173 (399)
T ss_dssp HHHHHHHHHHTTCTTEEEECSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEECCCTTCHHHHHTS
T ss_pred HHHHHHHHHhhhcCCcEEEcCCEEEEEEEcCCceEEEEEECCCCEEECCEEEECCCCChHHHHHhC
Confidence 6777888888887 89999999999999998898 89999998999999999987543 344554
No 320
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.94 E-value=1e-09 Score=112.19 Aligned_cols=114 Identities=11% Similarity=0.059 Sum_probs=84.8
Q ss_pred HHHHcCCCCCCeEEEeccCchHHHHHHHHhcCCEEEEEcCCH-------HHHHHHHHHHHHcCCCCCeEEEEccccCCc-
Q 035870 621 LIEKARVSKGQEVLEIGCGWGTLAIEIVKRTGCKYTGITLSE-------EQLKYAEMKVKEAGLQDLIRLYLCDYRQLA- 692 (842)
Q Consensus 621 l~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~-------~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~- 692 (842)
+.+.+...++.+|||+|||+|.+++.+|+. +++|+++|+|+ ++++.|+++++.+++.++++++++|+.++.
T Consensus 75 l~~a~~~~~~~~VLDlgcG~G~~a~~lA~~-g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~~~~l~ 153 (258)
T 2r6z_A 75 IAKAVNHTAHPTVWDATAGLGRDSFVLASL-GLTVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAEQMP 153 (258)
T ss_dssp HHHHTTGGGCCCEEETTCTTCHHHHHHHHT-TCCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCHHHHHH
T ss_pred HHHHhCcCCcCeEEEeeCccCHHHHHHHHh-CCEEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCHHHHHH
Confidence 344445567889999999999999999997 88999999999 999999999888777667999999988753
Q ss_pred --cC--CCccEEEEcchhhhcCh------------------hhHHHHHHHHHhccccCcEEEEEeec
Q 035870 693 --KA--NKYDRIISCEMIEAVGH------------------EFMEEFFGCCESLLAEDGLLVLQFIS 737 (842)
Q Consensus 693 --~~--~~fD~i~s~~~~~~~~~------------------~~~~~~~~~~~~~LkpgG~~~~~~~~ 737 (842)
++ ++||+|++..++.+... .+.+.+++.+.++.+. ++++....
T Consensus 154 ~~~~~~~~fD~V~~dP~~~~~~~sa~vkk~~~~l~~l~~~~~d~~~ll~~a~~~~~~--~vvvk~p~ 218 (258)
T 2r6z_A 154 ALVKTQGKPDIVYLDPMYPERRKSAAVKKEMAYFHRLVGEAQDEVVLLHTARQTAKK--RVVVKRPR 218 (258)
T ss_dssp HHHHHHCCCSEEEECCCC-------------HHHHHHHSHHHHHHHHHHHHHHHCSS--EEEEEEET
T ss_pred hhhccCCCccEEEECCCCCCcccchHHHHHHHHhhhhcCCCccHHHHHHHHHHhcCc--EEEEEcCC
Confidence 23 68999999887766421 1244555666666543 56665443
No 321
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=98.94 E-value=9.3e-09 Score=116.40 Aligned_cols=62 Identities=8% Similarity=-0.027 Sum_probs=49.8
Q ss_pred HHHHHHHHHhhhcCceEEeCCCeeEEEeCCCcEEEEeCCCc---EEeCCEEEEccChHH-HHHhhc
Q 035870 216 SYVNKVRKQLESWGCQIRTSSEVCSVLPADKGCTIVCGDGS---REFYNSCVMALHAPD-ALKILG 277 (842)
Q Consensus 216 ~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~---~~~ad~VV~A~p~~~-~~~ll~ 277 (842)
.+.+.|.+.+++.|++|+++++|++|+.++++|.|++.+|. +++||.||.|..... +.+.+.
T Consensus 108 ~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~~~~g~~~~~a~~vVgADG~~S~VR~~lg 173 (499)
T 2qa2_A 108 TTESVLEEWALGRGAELLRGHTVRALTDEGDHVVVEVEGPDGPRSLTTRYVVGCDGGRSTVRKAAG 173 (499)
T ss_dssp HHHHHHHHHHHHTTCEEEESCEEEEEEECSSCEEEEEECSSCEEEEEEEEEEECCCTTCHHHHHTT
T ss_pred HHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCcEEEEeCEEEEccCcccHHHHHcC
Confidence 56666777777779999999999999999999999887775 799999999976543 444543
No 322
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.94 E-value=3.3e-09 Score=120.13 Aligned_cols=137 Identities=17% Similarity=0.258 Sum_probs=101.0
Q ss_pred CChHHHHhccCCCCcccccccCCCcccHHHHHHHHHHHHHHHcCC----CCCCeEEEeccCchHH---HHHHHHhcCC--
Q 035870 583 LSNELFSLFLDESMTYSCAVFKSEDEDLKAAQMRKVSLLIEKARV----SKGQEVLEIGCGWGTL---AIEIVKRTGC-- 653 (842)
Q Consensus 583 ~~~~~~~~~l~~~~~ys~~~~~~~~~~l~~aq~~~~~~l~~~l~~----~~~~~vLDiGcG~G~~---~~~la~~~~~-- 653 (842)
+.+.-|+.|-.....| ...|+...+.+.++... ..+..|||||||+|.+ +..++++.+.
T Consensus 319 L~s~tYevFEkD~vKy------------~~Ye~AI~~Al~d~~~~~~~~~~~~vVldVGaGrGpLv~~al~A~a~~~~~v 386 (637)
T 4gqb_A 319 LESQTYEVFEKDPIKY------------SQYQQAIYKCLLDRVPEEEKDTNVQVLMVLGAGRGPLVNASLRAAKQADRRI 386 (637)
T ss_dssp CCHHHHHHHTTCHHHH------------HHHHHHHHHHHHHHSCGGGTTTCEEEEEEESCTTSHHHHHHHHHHHHTTCEE
T ss_pred hhhhhhhhhcCChhhH------------HHHHHHHHHHHHHhhhhccccCCCcEEEEECCCCcHHHHHHHHHHHhcCCCc
Confidence 4455666655444444 23333343444444322 2345799999999998 5555555444
Q ss_pred EEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCccCCCccEEEEcchhhhcChhhHHHHHHHHHhccccCcEEE
Q 035870 654 KYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLAKANKYDRIISCEMIEAVGHEFMEEFFGCCESLLAEDGLLV 732 (842)
Q Consensus 654 ~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~~~fD~i~s~~~~~~~~~~~~~~~~~~~~~~LkpgG~~~ 732 (842)
+|++||.|+ +...|++..+++++.++|+++.+|++++...+++|+|||-.|-..+-.|...+.+....|.|||||.++
T Consensus 387 kVyAVEknp-~A~~a~~~v~~N~~~dkVtVI~gd~eev~LPEKVDIIVSEwMG~fLl~E~mlevL~Ardr~LKPgGimi 464 (637)
T 4gqb_A 387 KLYAVEKNP-NAVVTLENWQFEEWGSQVTVVSSDMREWVAPEKADIIVSELLGSFADNELSPECLDGAQHFLKDDGVSI 464 (637)
T ss_dssp EEEEEESCH-HHHHHHHHHHHHTTGGGEEEEESCTTTCCCSSCEEEEECCCCBTTBGGGCHHHHHHHHGGGEEEEEEEE
T ss_pred EEEEEECCH-HHHHHHHHHHhccCCCeEEEEeCcceeccCCcccCEEEEEcCcccccccCCHHHHHHHHHhcCCCcEEc
Confidence 789999997 677899999999999999999999999985589999999777655555667788899999999999875
No 323
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=98.93 E-value=7.2e-09 Score=113.42 Aligned_cols=59 Identities=17% Similarity=0.149 Sum_probs=47.3
Q ss_pred HHHHHHHHHhhhcCceEEeCCCeeEEEeCCCcEEEEeCCCcEEeCCEEEEccChHH-HHHhhc
Q 035870 216 SYVNKVRKQLESWGCQIRTSSEVCSVLPADKGCTIVCGDGSREFYNSCVMALHAPD-ALKILG 277 (842)
Q Consensus 216 ~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VV~A~p~~~-~~~ll~ 277 (842)
.+.+.|.+.+++.|++|+++++|++|+. ++ .|++.+|+++.||.||.|..... +.+.+.
T Consensus 108 ~l~~~L~~~~~~~gv~i~~~~~v~~i~~--~~-~v~~~~g~~~~ad~vV~AdG~~s~vr~~l~ 167 (379)
T 3alj_A 108 HLHDALVNRARALGVDISVNSEAVAADP--VG-RLTLQTGEVLEADLIVGADGVGSKVRDSIG 167 (379)
T ss_dssp HHHHHHHHHHHHTTCEEESSCCEEEEET--TT-EEEETTSCEEECSEEEECCCTTCHHHHHHC
T ss_pred HHHHHHHHHHHhcCCEEEeCCEEEEEEe--CC-EEEECCCCEEEcCEEEECCCccHHHHHHhc
Confidence 6677777888778999999999999987 44 88888998999999999987543 334443
No 324
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=98.92 E-value=2.7e-09 Score=121.73 Aligned_cols=52 Identities=15% Similarity=0.121 Sum_probs=41.7
Q ss_pred HHHHHHhhhcCc--eEEeCCCeeEEEeCCC--cEEEEeCCCcEEeCCEEEEccChH
Q 035870 219 NKVRKQLESWGC--QIRTSSEVCSVLPADK--GCTIVCGDGSREFYNSCVMALHAP 270 (842)
Q Consensus 219 ~~L~~~l~~~G~--~i~~~~~V~~I~~~~~--~v~V~~~~G~~~~ad~VV~A~p~~ 270 (842)
+.+.+.+++.|. +|+++++|++++.+++ +|.|++.+|+++.||.||+|+...
T Consensus 91 ~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~G~~i~ad~lV~AtG~~ 146 (540)
T 3gwf_A 91 EYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDHGEVYRAKYVVNAVGLL 146 (540)
T ss_dssp HHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEETTSCEEEEEEEEECCCSC
T ss_pred HHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEcCCCEEEeCEEEECCccc
Confidence 334444444476 8999999999998766 689999999889999999999853
No 325
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=98.91 E-value=1.1e-08 Score=116.00 Aligned_cols=62 Identities=18% Similarity=0.088 Sum_probs=49.5
Q ss_pred HHHHHHHHHhhhcCceEEeCCCeeEEEeCCCcEEEEeCCCc---EEeCCEEEEccChHH-HHHhhc
Q 035870 216 SYVNKVRKQLESWGCQIRTSSEVCSVLPADKGCTIVCGDGS---REFYNSCVMALHAPD-ALKILG 277 (842)
Q Consensus 216 ~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~---~~~ad~VV~A~p~~~-~~~ll~ 277 (842)
.+.+.|.+.+++.|++|+++++|++|+.++++|.|++.+|. +++||.||.|..... +.+.+.
T Consensus 107 ~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~~~~g~~~~~a~~vVgADG~~S~VR~~lg 172 (500)
T 2qa1_A 107 VTETHLEQWATGLGADIRRGHEVLSLTDDGAGVTVEVRGPEGKHTLRAAYLVGCDGGRSSVRKAAG 172 (500)
T ss_dssp HHHHHHHHHHHHTTCEEEETCEEEEEEEETTEEEEEEEETTEEEEEEESEEEECCCTTCHHHHHTT
T ss_pred HHHHHHHHHHHHCCCEEECCcEEEEEEEcCCeEEEEEEcCCCCEEEEeCEEEECCCcchHHHHHcC
Confidence 56666777777779999999999999999999988887764 799999999976543 444543
No 326
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=98.91 E-value=5.9e-09 Score=113.10 Aligned_cols=110 Identities=8% Similarity=0.155 Sum_probs=86.4
Q ss_pred HHHHHHHHHcCCCCCCeEEEeccCchHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCc---
Q 035870 616 RKVSLLIEKARVSKGQEVLEIGCGWGTLAIEIVKRTGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLA--- 692 (842)
Q Consensus 616 ~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~--- 692 (842)
..+..+++.+... +.+|||+|||+|.+++.+|+. ..+|+|+|+|+++++.|+++++.+++. +++++++|+.++.
T Consensus 201 ~l~~~~~~~~~~~-~~~vLDl~cG~G~~~l~la~~-~~~V~gvd~~~~ai~~a~~n~~~ng~~-~v~~~~~d~~~~~~~~ 277 (369)
T 3bt7_A 201 QMLEWALDVTKGS-KGDLLELYCGNGNFSLALARN-FDRVLATEIAKPSVAAAQYNIAANHID-NVQIIRMAAEEFTQAM 277 (369)
T ss_dssp HHHHHHHHHTTTC-CSEEEEESCTTSHHHHHHGGG-SSEEEEECCCHHHHHHHHHHHHHTTCC-SEEEECCCSHHHHHHH
T ss_pred HHHHHHHHHhhcC-CCEEEEccCCCCHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHHcCCC-ceEEEECCHHHHHHHH
Confidence 4556667776654 578999999999999999986 679999999999999999999999985 8999999987653
Q ss_pred cC--------------CCccEEEEcchhhhcChhhHHHHHHHHHhccccCcEEEEEee
Q 035870 693 KA--------------NKYDRIISCEMIEAVGHEFMEEFFGCCESLLAEDGLLVLQFI 736 (842)
Q Consensus 693 ~~--------------~~fD~i~s~~~~~~~~~~~~~~~~~~~~~~LkpgG~~~~~~~ 736 (842)
.. .+||+|+....-.- +..++.+.|+|+|++++.++
T Consensus 278 ~~~~~~~~l~~~~~~~~~fD~Vv~dPPr~g--------~~~~~~~~l~~~g~ivyvsc 327 (369)
T 3bt7_A 278 NGVREFNRLQGIDLKSYQCETIFVDPPRSG--------LDSETEKMVQAYPRILYISC 327 (369)
T ss_dssp SSCCCCTTGGGSCGGGCCEEEEEECCCTTC--------CCHHHHHHHTTSSEEEEEES
T ss_pred hhccccccccccccccCCCCEEEECcCccc--------cHHHHHHHHhCCCEEEEEEC
Confidence 11 37999998654322 23345666778888887654
No 327
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.91 E-value=5e-09 Score=107.36 Aligned_cols=109 Identities=17% Similarity=0.197 Sum_probs=83.7
Q ss_pred HHHHHHHHHcCCCCCCeEEEeccCchHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCc-cC
Q 035870 616 RKVSLLIEKARVSKGQEVLEIGCGWGTLAIEIVKRTGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLA-KA 694 (842)
Q Consensus 616 ~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~-~~ 694 (842)
..++.+++.+++.++ +|||||||+|.++..+++. +.+|+++|+|+++++.+++++.. ++++++++|+.+++ ++
T Consensus 34 ~i~~~Iv~~~~~~~~-~VLEIG~G~G~lt~~L~~~-~~~V~avEid~~~~~~l~~~~~~----~~v~vi~~D~l~~~~~~ 107 (271)
T 3fut_A 34 AHLRRIVEAARPFTG-PVFEVGPGLGALTRALLEA-GAEVTAIEKDLRLRPVLEETLSG----LPVRLVFQDALLYPWEE 107 (271)
T ss_dssp HHHHHHHHHHCCCCS-CEEEECCTTSHHHHHHHHT-TCCEEEEESCGGGHHHHHHHTTT----SSEEEEESCGGGSCGGG
T ss_pred HHHHHHHHhcCCCCC-eEEEEeCchHHHHHHHHHc-CCEEEEEECCHHHHHHHHHhcCC----CCEEEEECChhhCChhh
Confidence 455688899999999 9999999999999999998 78999999999999999998752 48999999998887 32
Q ss_pred -CCccEEEEcchhhhcChhhHHHHHHHHHhccccCcEEEEE
Q 035870 695 -NKYDRIISCEMIEAVGHEFMEEFFGCCESLLAEDGLLVLQ 734 (842)
Q Consensus 695 -~~fD~i~s~~~~~~~~~~~~~~~~~~~~~~LkpgG~~~~~ 734 (842)
..+|.|++|.... ++..-+..++.. ..-+.+.++++
T Consensus 108 ~~~~~~iv~NlPy~-iss~il~~ll~~---~~~~~~~lm~Q 144 (271)
T 3fut_A 108 VPQGSLLVANLPYH-IATPLVTRLLKT---GRFARLVFLVQ 144 (271)
T ss_dssp SCTTEEEEEEECSS-CCHHHHHHHHHH---CCEEEEEEEEE
T ss_pred ccCccEEEecCccc-ccHHHHHHHhcC---CCCCEEEEEee
Confidence 3789999987644 443223333433 11235556554
No 328
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=98.91 E-value=2.6e-09 Score=122.12 Aligned_cols=39 Identities=33% Similarity=0.493 Sum_probs=36.6
Q ss_pred cEEEECCChHHHHHHHHHHhCCCeEEEEecCCCCCCCce
Q 035870 2 RVAVIGAGISGLVSAYVLAKAGVEVVLYEKDDYLGGHAK 40 (842)
Q Consensus 2 dV~IIGaGiaGLsaA~~L~~~G~~V~VlEa~~~~GG~~~ 40 (842)
||+|||||++||+||+.|++.|++|+|+|+++.+||...
T Consensus 23 dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GGtw~ 61 (549)
T 4ap3_A 23 DVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGVGGVWY 61 (549)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHH
T ss_pred CEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCCCCccc
Confidence 799999999999999999999999999999999998543
No 329
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=98.90 E-value=1.4e-08 Score=115.46 Aligned_cols=58 Identities=14% Similarity=0.089 Sum_probs=45.4
Q ss_pred ChhHHHHHHHHHhhhcCceEEeCCCeeEEEeC-CCcE-EEEeC-CCc--EEeCC-EEEEccChH
Q 035870 213 RSHSYVNKVRKQLESWGCQIRTSSEVCSVLPA-DKGC-TIVCG-DGS--REFYN-SCVMALHAP 270 (842)
Q Consensus 213 G~~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~-~~~v-~V~~~-~G~--~~~ad-~VV~A~p~~ 270 (842)
|...+.+.|.+.+++.|++|+++++|++|..+ +++| .|.+. +|+ ++.|| .||+|+...
T Consensus 200 g~~~l~~~L~~~~~~~Gv~i~~~t~v~~L~~~~~g~v~GV~~~~~g~~~~i~A~k~VVlAtGG~ 263 (510)
T 4at0_A 200 GGYMLMKPLVETAEKLGVRAEYDMRVQTLVTDDTGRVVGIVAKQYGKEVAVRARRGVVLATGSF 263 (510)
T ss_dssp TTHHHHHHHHHHHHHTTCEEECSEEEEEEEECTTCCEEEEEEEETTEEEEEEEEEEEEECCCCC
T ss_pred CHHHHHHHHHHHHHHcCCEEEecCEeEEEEECCCCcEEEEEEEECCcEEEEEeCCeEEEeCCCh
Confidence 33489999999999999999999999999998 4554 34443 333 58996 999998754
No 330
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.90 E-value=3.3e-09 Score=108.01 Aligned_cols=86 Identities=15% Similarity=0.220 Sum_probs=73.7
Q ss_pred HHHHHHHHHcCCCCCCeEEEeccCchHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCc-c-
Q 035870 616 RKVSLLIEKARVSKGQEVLEIGCGWGTLAIEIVKRTGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLA-K- 693 (842)
Q Consensus 616 ~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~-~- 693 (842)
..++.+++.+.+.++++|||||||+|.++..+++. +.+|+++|+|+++++.+++++.. .++++++++|+.+++ +
T Consensus 16 ~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~-~~~V~avEid~~~~~~~~~~~~~---~~~v~~i~~D~~~~~~~~ 91 (255)
T 3tqs_A 16 FVLQKIVSAIHPQKTDTLVEIGPGRGALTDYLLTE-CDNLALVEIDRDLVAFLQKKYNQ---QKNITIYQNDALQFDFSS 91 (255)
T ss_dssp HHHHHHHHHHCCCTTCEEEEECCTTTTTHHHHTTT-SSEEEEEECCHHHHHHHHHHHTT---CTTEEEEESCTTTCCGGG
T ss_pred HHHHHHHHhcCCCCcCEEEEEcccccHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHhh---CCCcEEEEcchHhCCHHH
Confidence 45567889999999999999999999999999998 78999999999999999999865 248999999998886 2
Q ss_pred ---CCCccEEEEcchh
Q 035870 694 ---ANKYDRIISCEMI 706 (842)
Q Consensus 694 ---~~~fD~i~s~~~~ 706 (842)
.++|| |++|...
T Consensus 92 ~~~~~~~~-vv~NlPY 106 (255)
T 3tqs_A 92 VKTDKPLR-VVGNLPY 106 (255)
T ss_dssp SCCSSCEE-EEEECCH
T ss_pred hccCCCeE-EEecCCc
Confidence 35688 7777654
No 331
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=98.89 E-value=1.2e-08 Score=112.54 Aligned_cols=53 Identities=13% Similarity=0.100 Sum_probs=45.1
Q ss_pred HHHHHHHHHhhhcCceEEeCCCeeEEEeCCCcEEEEeCCCcEEeCCEEEEccChH
Q 035870 216 SYVNKVRKQLESWGCQIRTSSEVCSVLPADKGCTIVCGDGSREFYNSCVMALHAP 270 (842)
Q Consensus 216 ~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VV~A~p~~ 270 (842)
.+.+.|.+.++ +++|+++++|++|+.++++|.|++.+|+++.||.||.|....
T Consensus 129 ~l~~~L~~~~~--~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~ 181 (398)
T 2xdo_A 129 DLRAILLNSLE--NDTVIWDRKLVMLEPGKKKWTLTFENKPSETADLVILANGGM 181 (398)
T ss_dssp HHHHHHHHTSC--TTSEEESCCEEEEEECSSSEEEEETTSCCEEESEEEECSCTT
T ss_pred HHHHHHHhhcC--CCEEEECCEEEEEEECCCEEEEEECCCcEEecCEEEECCCcc
Confidence 45666777665 368999999999999988999999999889999999998754
No 332
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=98.89 E-value=2.3e-09 Score=115.50 Aligned_cols=102 Identities=13% Similarity=0.098 Sum_probs=86.2
Q ss_pred CCCCeEEEeccCchHHHHHHHHh-cC-CEEEEEcCCHHHHHHHHHHHHHcCCCCC-eEEEEccccCCcc---CCCccEEE
Q 035870 628 SKGQEVLEIGCGWGTLAIEIVKR-TG-CKYTGITLSEEQLKYAEMKVKEAGLQDL-IRLYLCDYRQLAK---ANKYDRII 701 (842)
Q Consensus 628 ~~~~~vLDiGcG~G~~~~~la~~-~~-~~v~gid~s~~~~~~a~~~~~~~~l~~~-v~~~~~d~~~~~~---~~~fD~i~ 701 (842)
+++.+|||++||+|.+++.++++ .| .+|+++|+|+++++.++++++.++++++ ++++++|+.++.. .++||+|+
T Consensus 51 ~~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~~~~~~fD~V~ 130 (392)
T 3axs_A 51 GRPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRKEWGFGFDYVD 130 (392)
T ss_dssp CSCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHHSCCSSCEEEEE
T ss_pred CCCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHhhCCCCcEEE
Confidence 57889999999999999999986 34 5899999999999999999999999866 9999999865432 35899999
Q ss_pred EcchhhhcChhhHHHHHHHHHhccccCcEEEEEe
Q 035870 702 SCEMIEAVGHEFMEEFFGCCESLLAEDGLLVLQF 735 (842)
Q Consensus 702 s~~~~~~~~~~~~~~~~~~~~~~LkpgG~~~~~~ 735 (842)
... . +. ...++..+.++|+|||.+++..
T Consensus 131 lDP-~---g~--~~~~l~~a~~~Lk~gGll~~t~ 158 (392)
T 3axs_A 131 LDP-F---GT--PVPFIESVALSMKRGGILSLTA 158 (392)
T ss_dssp ECC-S---SC--CHHHHHHHHHHEEEEEEEEEEE
T ss_pred ECC-C---cC--HHHHHHHHHHHhCCCCEEEEEe
Confidence 976 1 21 3568888999999999888865
No 333
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=98.89 E-value=5.8e-09 Score=112.61 Aligned_cols=100 Identities=16% Similarity=0.084 Sum_probs=84.9
Q ss_pred CCCeEEEeccCchHHHHHHHHh-cCCEEEEEcCCHHHHHHHHHHHHHc---------------CCCCCeEEEEccccCCc
Q 035870 629 KGQEVLEIGCGWGTLAIEIVKR-TGCKYTGITLSEEQLKYAEMKVKEA---------------GLQDLIRLYLCDYRQLA 692 (842)
Q Consensus 629 ~~~~vLDiGcG~G~~~~~la~~-~~~~v~gid~s~~~~~~a~~~~~~~---------------~l~~~v~~~~~d~~~~~ 692 (842)
++.+|||+|||+|.+++.++++ .+.+|+++|+|+++++.++++++.+ ++. +++++++|+.++.
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~-~i~v~~~Da~~~~ 125 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEK-TIVINHDDANRLM 125 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSS-EEEEEESCHHHHH
T ss_pred CCCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCC-ceEEEcCcHHHHH
Confidence 6889999999999999999998 5579999999999999999999998 876 4999999987765
Q ss_pred --cCCCccEEEEcchhhhcChhhHHHHHHHHHhccccCcEEEEEe
Q 035870 693 --KANKYDRIISCEMIEAVGHEFMEEFFGCCESLLAEDGLLVLQF 735 (842)
Q Consensus 693 --~~~~fD~i~s~~~~~~~~~~~~~~~~~~~~~~LkpgG~~~~~~ 735 (842)
..++||+|+.... . . ...++..+.+.|||||.+++..
T Consensus 126 ~~~~~~fD~I~lDP~-~---~--~~~~l~~a~~~lk~gG~l~vt~ 164 (378)
T 2dul_A 126 AERHRYFHFIDLDPF-G---S--PMEFLDTALRSAKRRGILGVTA 164 (378)
T ss_dssp HHSTTCEEEEEECCS-S---C--CHHHHHHHHHHEEEEEEEEEEE
T ss_pred HhccCCCCEEEeCCC-C---C--HHHHHHHHHHhcCCCCEEEEEe
Confidence 2358999997542 1 1 3578888999999999888754
No 334
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=98.89 E-value=2.3e-09 Score=112.61 Aligned_cols=111 Identities=20% Similarity=0.233 Sum_probs=83.1
Q ss_pred CCCCeEEEeccCchHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHHcC---CC----CCeEEEEccccCCc-----cCC
Q 035870 628 SKGQEVLEIGCGWGTLAIEIVKRTGCKYTGITLSEEQLKYAEMKVKEAG---LQ----DLIRLYLCDYRQLA-----KAN 695 (842)
Q Consensus 628 ~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~~---l~----~~v~~~~~d~~~~~-----~~~ 695 (842)
.++.+||+||||.|.++..+++++..+|+++|+++++++.|++++...+ +. ++++++.+|..+.. ..+
T Consensus 187 p~pkrVL~IGgG~G~~arellk~~~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~~ 266 (364)
T 2qfm_A 187 YTGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGR 266 (364)
T ss_dssp CTTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTC
T ss_pred CCCCEEEEEECChhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccCC
Confidence 3578999999999999999998855799999999999999999865321 32 27999999987754 257
Q ss_pred CccEEEEcchh---hhcCh-hhHHHHHHHH----HhccccCcEEEEEeecC
Q 035870 696 KYDRIISCEMI---EAVGH-EFMEEFFGCC----ESLLAEDGLLVLQFISI 738 (842)
Q Consensus 696 ~fD~i~s~~~~---~~~~~-~~~~~~~~~~----~~~LkpgG~~~~~~~~~ 738 (842)
+||+|++...- ...+. -.-.++++.+ .++|+|||.++++..+.
T Consensus 267 ~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs~s~ 317 (364)
T 2qfm_A 267 EFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNCV 317 (364)
T ss_dssp CEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEEET
T ss_pred CceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEcCCc
Confidence 89999997532 11110 0124555555 99999999999986543
No 335
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=98.88 E-value=5.8e-09 Score=119.70 Aligned_cols=61 Identities=18% Similarity=0.010 Sum_probs=49.7
Q ss_pred HHHHHHHHHhhhcCceEEeCCCeeEEEeCCC----cEEEEeCCC---cEEeCCEEEEccChHH-HHHhh
Q 035870 216 SYVNKVRKQLESWGCQIRTSSEVCSVLPADK----GCTIVCGDG---SREFYNSCVMALHAPD-ALKIL 276 (842)
Q Consensus 216 ~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~----~v~V~~~~G---~~~~ad~VV~A~p~~~-~~~ll 276 (842)
.+...|.+.+++.|++|+++++|++|+.+++ +|.|++.++ .+++||.||.|..... +.+.+
T Consensus 121 ~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~~~v~v~~~~~~~~~~i~a~~vV~AdG~~S~vR~~l 189 (535)
T 3ihg_A 121 KLEPILLAQARKHGGAIRFGTRLLSFRQHDDDAGAGVTARLAGPDGEYDLRAGYLVGADGNRSLVRESL 189 (535)
T ss_dssp HHHHHHHHHHHHTTCEEESSCEEEEEEEECGGGCSEEEEEEEETTEEEEEEEEEEEECCCTTCHHHHHT
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEEEECCCCccccEEEEEEcCCCeEEEEeCEEEECCCCcchHHHHc
Confidence 5667788888888999999999999999988 888888776 6899999999986543 34444
No 336
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=98.87 E-value=2.4e-08 Score=114.90 Aligned_cols=56 Identities=11% Similarity=0.054 Sum_probs=46.0
Q ss_pred HHHHHHHHHhhhcCceEEeCCCeeEEEeC-CCcEEEEeC-CC--cEEeCCEEEEccChHH
Q 035870 216 SYVNKVRKQLESWGCQIRTSSEVCSVLPA-DKGCTIVCG-DG--SREFYNSCVMALHAPD 271 (842)
Q Consensus 216 ~l~~~L~~~l~~~G~~i~~~~~V~~I~~~-~~~v~V~~~-~G--~~~~ad~VV~A~p~~~ 271 (842)
.+.+.|.+.+++.|++|+.+++|++|..+ ++.+.|++. +| .++.||.||.|+....
T Consensus 129 ~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~~g~~~~V~~~~~G~~~~i~AdlVV~AdG~~S 188 (591)
T 3i3l_A 129 EFDKLLLDEARSRGITVHEETPVTDVDLSDPDRVVLTVRRGGESVTVESDFVIDAGGSGG 188 (591)
T ss_dssp HHHHHHHHHHHHTTCEEETTCCEEEEECCSTTCEEEEEEETTEEEEEEESEEEECCGGGC
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCEEEEEEecCCceEEEEcCEEEECCCCcc
Confidence 56777888888889999999999999986 455788876 67 5799999999987553
No 337
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=98.86 E-value=9.6e-09 Score=113.10 Aligned_cols=55 Identities=9% Similarity=-0.024 Sum_probs=44.3
Q ss_pred HHHHHHHHHhhhcCceEEeCCCeeEEEeCC-CcEEEEe-CCCc--EEeCCEEEEccChH
Q 035870 216 SYVNKVRKQLESWGCQIRTSSEVCSVLPAD-KGCTIVC-GDGS--REFYNSCVMALHAP 270 (842)
Q Consensus 216 ~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~-~~v~V~~-~~G~--~~~ad~VV~A~p~~ 270 (842)
.+.+.|.+.+.+.|++|+++++|++|..++ +++.|++ .+|+ ++.||.||.|....
T Consensus 104 ~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~~g~~~~~~a~~vV~AdG~~ 162 (394)
T 1k0i_A 104 EVTRDLMEAREACGATTVYQAAEVRLHDLQGERPYVTFERDGERLRLDCDYIAGCDGFH 162 (394)
T ss_dssp HHHHHHHHHHHHTTCEEESSCEEEEEECTTSSSCEEEEEETTEEEEEECSEEEECCCTT
T ss_pred HHHHHHHHHHHhcCCeEEeceeEEEEEEecCCceEEEEecCCcEEEEEeCEEEECCCCC
Confidence 455667777777799999999999999864 5678877 6887 69999999998654
No 338
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=98.85 E-value=6.4e-09 Score=119.45 Aligned_cols=62 Identities=10% Similarity=0.023 Sum_probs=49.8
Q ss_pred HHHHHHHHHhhhcCceEEeCCCeeEEEeCCCcEEEEe--CCC-cEEeCCEEEEccChH-HHHHhhc
Q 035870 216 SYVNKVRKQLESWGCQIRTSSEVCSVLPADKGCTIVC--GDG-SREFYNSCVMALHAP-DALKILG 277 (842)
Q Consensus 216 ~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v~V~~--~~G-~~~~ad~VV~A~p~~-~~~~ll~ 277 (842)
.+.+.|.+.+++.|++|+++++|++|+.++++|.|++ .+| ++++||.||.|.... .+.+.+.
T Consensus 149 ~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~~~v~v~~~~~~G~~~~~a~~vV~ADG~~S~vR~~lG 214 (570)
T 3fmw_A 149 RTEALLAEHAREAGAEIPRGHEVTRLRQDAEAVEVTVAGPSGPYPVRARYGVGCDGGRSTVRRLAA 214 (570)
T ss_dssp HHHHHHHHHHHHHTEECCBSCEEEECCBCSSCEEEEEEETTEEEEEEESEEEECSCSSCHHHHHTT
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCeEEEEEEeCCCcEEEEeCEEEEcCCCCchHHHHcC
Confidence 5666777777777999999999999999999988877 788 689999999997644 3444543
No 339
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=98.85 E-value=1.2e-07 Score=101.34 Aligned_cols=172 Identities=12% Similarity=0.141 Sum_probs=107.1
Q ss_pred HHHHHHHHHcCCCC-----CCeEEEeccCchHHHHHHHHh----------------cCCEEEEEcCCHHHHHHHHHHHHH
Q 035870 616 RKVSLLIEKARVSK-----GQEVLEIGCGWGTLAIEIVKR----------------TGCKYTGITLSEEQLKYAEMKVKE 674 (842)
Q Consensus 616 ~~~~~l~~~l~~~~-----~~~vLDiGcG~G~~~~~la~~----------------~~~~v~gid~s~~~~~~a~~~~~~ 674 (842)
..++..++.+...+ ..+|+|+|||+|..+..++.. +..+|...|+........=+.+..
T Consensus 34 ~~~~~ai~~l~~~~~~~~~~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~ 113 (374)
T 3b5i_A 34 HLLEETLENVHLNSSASPPPFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPP 113 (374)
T ss_dssp HHHHHHHHTSCCCCSSSCCCEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCC
T ss_pred HHHHHHHHHhhccccCCCCceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhh
Confidence 34455556665543 579999999999999887322 235677777665554333222221
Q ss_pred cC-----------CCCCeEEEEcc----ccCCccCCCccEEEEcchhhhcCh----------------------------
Q 035870 675 AG-----------LQDLIRLYLCD----YRQLAKANKYDRIISCEMIEAVGH---------------------------- 711 (842)
Q Consensus 675 ~~-----------l~~~v~~~~~d----~~~~~~~~~fD~i~s~~~~~~~~~---------------------------- 711 (842)
.. ...+-.|..+. |..+-++++||+|+|+.++|++.+
T Consensus 114 ~~~~~~~~~~~~~~~~~~~f~~gvpgSFy~rlfP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~ 193 (374)
T 3b5i_A 114 LVSNTCMEECLAADGNRSYFVAGVPGSFYRRLFPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTT 193 (374)
T ss_dssp BCCCC--CCC---CCCBCSEEEEEESCTTSCCSCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHH
T ss_pred hhhhcchhhhccccCCCceEEEecChhhhcccCCCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHH
Confidence 10 00011122222 122226789999999999999862
Q ss_pred --------hhHHHHHHHHHhccccCcEEEEEeecCCCcc-cc----------cc-------cC----ccchhhhcccCCC
Q 035870 712 --------EFMEEFFGCCESLLAEDGLLVLQFISIPDER-YN----------EY-------RL----SSDFIKEYIFPGG 761 (842)
Q Consensus 712 --------~~~~~~~~~~~~~LkpgG~~~~~~~~~~~~~-~~----------~~-------~~----~~~~~~~~i~p~~ 761 (842)
+++..+|+..++.|+|||++++.....++.. +. .. .. ...++..+-.| -
T Consensus 194 ~ay~~Qf~~D~~~fL~~ra~eL~pGG~mvl~~~gr~~~~~~~~~~~~~~~~~~l~~al~~l~~eG~i~~e~~d~f~~P-~ 272 (374)
T 3b5i_A 194 TAYKRQFQADLAEFLRARAAEVKRGGAMFLVCLGRTSVDPTDQGGAGLLFGTHFQDAWDDLVREGLVAAEKRDGFNIP-V 272 (374)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEECCCSSTTCCHHHHHHHSSHHHHHHHHTTSSSSSCHHHHSSCCCC-B
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEEecCCCCccccccchhhHHHHHHHHHHHHHHHhCCcchhhcccCCcc-c
Confidence 1466789999999999999999988776532 11 00 00 01112222334 3
Q ss_pred CCCCHHHHHHHHhhcCCcEEEEEEecC
Q 035870 762 CLPSLSRITSAMSVASRLCVEQVENIG 788 (842)
Q Consensus 762 ~~~~~~~~~~~~~~~~gf~v~~~~~~~ 788 (842)
+.|+.+++...+++..||++..++.+.
T Consensus 273 y~ps~~E~~~~l~~~~~F~I~~le~~~ 299 (374)
T 3b5i_A 273 YAPSLQDFKEVVDANGSFAIDKLVVYK 299 (374)
T ss_dssp CCCCHHHHHHHHHHHCSEEEEEEEEEE
T ss_pred cCCCHHHHHHHHHhcCCcEEEEEEEEe
Confidence 568999999999866899999987653
No 340
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.84 E-value=4.2e-09 Score=109.69 Aligned_cols=86 Identities=30% Similarity=0.433 Sum_probs=74.3
Q ss_pred HHHHHHHcCCCCCCeEEEeccCchHHHHHHHHh-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCc---c
Q 035870 618 VSLLIEKARVSKGQEVLEIGCGWGTLAIEIVKR-TGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLA---K 693 (842)
Q Consensus 618 ~~~l~~~l~~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~---~ 693 (842)
++.+++.+.++++.+|||+|||+|+++..+++. ++.+|+|+|+|+++++.|+++++..+ ++++++++|+.+++ .
T Consensus 15 l~e~l~~L~~~~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~g--~~v~~v~~d~~~l~~~l~ 92 (301)
T 1m6y_A 15 VREVIEFLKPEDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFS--DRVSLFKVSYREADFLLK 92 (301)
T ss_dssp HHHHHHHHCCCTTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGT--TTEEEEECCGGGHHHHHH
T ss_pred HHHHHHhcCCCCCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcC--CcEEEEECCHHHHHHHHH
Confidence 346777888889999999999999999999998 46899999999999999999998877 48999999998875 1
Q ss_pred C---CCccEEEEcch
Q 035870 694 A---NKYDRIISCEM 705 (842)
Q Consensus 694 ~---~~fD~i~s~~~ 705 (842)
. .+||.|++...
T Consensus 93 ~~g~~~~D~Vl~D~g 107 (301)
T 1m6y_A 93 TLGIEKVDGILMDLG 107 (301)
T ss_dssp HTTCSCEEEEEEECS
T ss_pred hcCCCCCCEEEEcCc
Confidence 1 58999998653
No 341
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=98.83 E-value=1.2e-08 Score=112.98 Aligned_cols=61 Identities=28% Similarity=0.452 Sum_probs=47.3
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCe-EEEEecCCCCCCCceeEeeCCeeeecceEeecCCCchhHHHHHHHcCCCccc
Q 035870 1 MRVAVIGAGISGLVSAYVLAKAGVE-VVLYEKDDYLGGHAKTVTFDGVDLDLGFMVFNRVTYPNMMEFFESLGVDMEM 77 (842)
Q Consensus 1 kdV~IIGaGiaGLsaA~~L~~~G~~-V~VlEa~~~~GG~~~s~~~~g~~~d~G~~~~~~~~~~~~~~l~~~lGl~~~~ 77 (842)
+||+|||||++||++|+.|++.|++ |+|+|+.+.++..... .. ..++..++++++|+....
T Consensus 5 ~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~~~~~g~g------------~~----l~~~~~~~l~~lg~~~~l 66 (410)
T 3c96_A 5 IDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEIRPLGVG------------IN----IQPAAVEALAELGLGPAL 66 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSSCCCCSCE------------EE----ECHHHHHHHHHTTCHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCCcccceeE------------EE----EChHHHHHHHHCCChHHH
Confidence 3899999999999999999999999 9999998876542111 11 245777888999875443
No 342
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=98.82 E-value=1.8e-08 Score=114.76 Aligned_cols=55 Identities=18% Similarity=0.134 Sum_probs=45.4
Q ss_pred HHHHHHHHHhhhcCceEEeCCCeeEEEeCCCc---EEEEeCCCc--EEeCCEEEEccChH
Q 035870 216 SYVNKVRKQLESWGCQIRTSSEVCSVLPADKG---CTIVCGDGS--REFYNSCVMALHAP 270 (842)
Q Consensus 216 ~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~---v~V~~~~G~--~~~ad~VV~A~p~~ 270 (842)
.+.+.|.+.+++.|++|+++++|++|..++++ |.+.+.+|+ ++.||.||.|+...
T Consensus 112 ~l~~~L~~~a~~~Gv~i~~~~~V~~v~~~~~~v~gv~~~~~dG~~~~i~ad~VI~AdG~~ 171 (512)
T 3e1t_A 112 RFDDMLLRNSERKGVDVRERHEVIDVLFEGERAVGVRYRNTEGVELMAHARFIVDASGNR 171 (512)
T ss_dssp HHHHHHHHHHHHTTCEEESSCEEEEEEEETTEEEEEEEECSSSCEEEEEEEEEEECCCTT
T ss_pred HHHHHHHHHHHhCCCEEEcCCEEEEEEEECCEEEEEEEEeCCCCEEEEEcCEEEECCCcc
Confidence 56777888887889999999999999998875 455566784 79999999998764
No 343
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=98.81 E-value=3.8e-08 Score=111.69 Aligned_cols=58 Identities=12% Similarity=-0.052 Sum_probs=50.0
Q ss_pred hhHHHHHHHHHhhhcCceEEeCCCeeEEEeCCCcEEEEe---CCCc--EEeCCEEEEccChHH
Q 035870 214 SHSYVNKVRKQLESWGCQIRTSSEVCSVLPADKGCTIVC---GDGS--REFYNSCVMALHAPD 271 (842)
Q Consensus 214 ~~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v~V~~---~~G~--~~~ad~VV~A~p~~~ 271 (842)
...++..|++.+.++|++|+.+++|++|..+++.+.|++ .+|+ ++.||.||+|+.++.
T Consensus 148 ~~~l~~~l~~~a~~~Gv~i~~~~~V~~l~~~~~~~~V~~~d~~~G~~~~i~A~~VV~AtG~~s 210 (501)
T 2qcu_A 148 DARLVLANAQMVVRKGGEVLTRTRATSARRENGLWIVEAEDIDTGKKYSWQARGLVNATGPWV 210 (501)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSEEEEEEEEETTEEEEEEEETTTCCEEEEEESCEEECCGGGH
T ss_pred HHHHHHHHHHHHHHcCCEEEcCcEEEEEEEeCCEEEEEEEECCCCCEEEEECCEEEECCChhH
Confidence 568999999999999999999999999998876677777 3575 789999999998874
No 344
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=98.81 E-value=1.1e-08 Score=110.86 Aligned_cols=54 Identities=6% Similarity=-0.034 Sum_probs=44.9
Q ss_pred HHHHHHHHHhhhcCceEEeCCCeeEEEeCCCcEE-EEeCCCcEEeCCEEEEccChH
Q 035870 216 SYVNKVRKQLESWGCQIRTSSEVCSVLPADKGCT-IVCGDGSREFYNSCVMALHAP 270 (842)
Q Consensus 216 ~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v~-V~~~~G~~~~ad~VV~A~p~~ 270 (842)
.+.+.+.+.+++.|++++++++|++|..+++++. |++.+| ++.||+||+|+...
T Consensus 77 ~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g-~~~~d~vV~AtG~~ 131 (357)
T 4a9w_A 77 EVLAYLAQYEQKYALPVLRPIRVQRVSHFGERLRVVARDGR-QWLARAVISATGTW 131 (357)
T ss_dssp HHHHHHHHHHHHTTCCEECSCCEEEEEEETTEEEEEETTSC-EEEEEEEEECCCSG
T ss_pred HHHHHHHHHHHHcCCEEEcCCEEEEEEECCCcEEEEEeCCC-EEEeCEEEECCCCC
Confidence 3444455555666999999999999999999998 999888 89999999999854
No 345
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=98.81 E-value=1.4e-08 Score=117.11 Aligned_cols=57 Identities=14% Similarity=0.052 Sum_probs=45.1
Q ss_pred hhHHHHHHHHHhhhcCceEEeCCCeeEEEeCC-CcE---EEEeCCCc--EEeCCEEEEccChH
Q 035870 214 SHSYVNKVRKQLESWGCQIRTSSEVCSVLPAD-KGC---TIVCGDGS--REFYNSCVMALHAP 270 (842)
Q Consensus 214 ~~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~-~~v---~V~~~~G~--~~~ad~VV~A~p~~ 270 (842)
...+.+.|.+.+++.|++|+++++|++|..++ ++| .+.+.+|+ ++.||.||+|+...
T Consensus 254 g~~l~~~L~~~~~~~gv~i~~~t~v~~l~~~~~g~v~GV~~~~~~G~~~~i~A~~VVlAtGg~ 316 (572)
T 1d4d_A 254 GAHVAQVLWDNAVKRGTDIRLNSRVVRILEDASGKVTGVLVKGEYTGYYVIKADAVVIAAGGF 316 (572)
T ss_dssp HHHHHHHHHHHHHHTTCEEESSEEEEEEEEC--CCEEEEEEEETTTEEEEEECSEEEECCCCC
T ss_pred HHHHHHHHHHHHHHcCCeEEecCEEEEEEECCCCeEEEEEEEeCCCcEEEEEcCEEEEeCCCC
Confidence 35788999999999999999999999998876 553 33334675 58999999998754
No 346
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.79 E-value=1.2e-08 Score=114.60 Aligned_cols=102 Identities=13% Similarity=0.108 Sum_probs=81.7
Q ss_pred CCeEEEeccCchHHHH---HHHHhcC-----------CEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCcc--
Q 035870 630 GQEVLEIGCGWGTLAI---EIVKRTG-----------CKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLAK-- 693 (842)
Q Consensus 630 ~~~vLDiGcG~G~~~~---~la~~~~-----------~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~-- 693 (842)
+..|||||||+|.++. .+++..+ .+|++||.|+.+....+++.. +++.++|+++.+|++++..
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~-Ng~~d~VtVI~gd~eev~lp~ 488 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNV-RTWKRRVTIIESDMRSLPGIA 488 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHH-HTTTTCSEEEESCGGGHHHHH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHh-cCCCCeEEEEeCchhhccccc
Confidence 4589999999999964 3333212 399999999987776666654 7899899999999999873
Q ss_pred ----CCCccEEEEcchhhhcChhhHHHHHHHHHhccccCcEEE
Q 035870 694 ----ANKYDRIISCEMIEAVGHEFMEEFFGCCESLLAEDGLLV 732 (842)
Q Consensus 694 ----~~~fD~i~s~~~~~~~~~~~~~~~~~~~~~~LkpgG~~~ 732 (842)
.++.|+|||-.|-.....|..++.+..+.+.|||||.++
T Consensus 489 ~~~~~ekVDIIVSElmGsfl~nEL~pe~Ld~v~r~Lkp~Gi~i 531 (745)
T 3ua3_A 489 KDRGFEQPDIIVSELLGSFGDNELSPECLDGVTGFLKPTTISI 531 (745)
T ss_dssp HHTTCCCCSEEEECCCBTTBGGGSHHHHHHTTGGGSCTTCEEE
T ss_pred ccCCCCcccEEEEeccccccchhccHHHHHHHHHhCCCCcEEE
Confidence 689999999877655555667889999999999999866
No 347
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=98.79 E-value=1.2e-08 Score=108.69 Aligned_cols=53 Identities=8% Similarity=0.088 Sum_probs=41.6
Q ss_pred HHHHHHHHhhhcCceEEeCCCeeEEEeCCCcEEEEeCCCcEEeCCEEEEccChH
Q 035870 217 YVNKVRKQLESWGCQIRTSSEVCSVLPADKGCTIVCGDGSREFYNSCVMALHAP 270 (842)
Q Consensus 217 l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VV~A~p~~ 270 (842)
+.+.+.+.+++.|+++++ ++|++|..+++.+.|++.+|+++.+|+||+|+...
T Consensus 72 ~~~~~~~~~~~~~v~~~~-~~v~~i~~~~~~~~v~~~~g~~~~~d~lvlAtG~~ 124 (323)
T 3f8d_A 72 MIKVFNKHIEKYEVPVLL-DIVEKIENRGDEFVVKTKRKGEFKADSVILGIGVK 124 (323)
T ss_dssp HHHHHHHHHHTTTCCEEE-SCEEEEEEC--CEEEEESSSCEEEEEEEEECCCCE
T ss_pred HHHHHHHHHHHcCCEEEE-EEEEEEEecCCEEEEEECCCCEEEcCEEEECcCCC
Confidence 333445555566889999 99999999988899999998899999999998754
No 348
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=98.78 E-value=2.6e-08 Score=104.12 Aligned_cols=38 Identities=42% Similarity=0.651 Sum_probs=35.4
Q ss_pred cEEEECCChHHHHHHHHHHhC-CCeEEEEecCCCCCCCc
Q 035870 2 RVAVIGAGISGLVSAYVLAKA-GVEVVLYEKDDYLGGHA 39 (842)
Q Consensus 2 dV~IIGaGiaGLsaA~~L~~~-G~~V~VlEa~~~~GG~~ 39 (842)
||+|||||++||+||+.|++. |.+|+|+|+.+.+||.+
T Consensus 41 dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~~ 79 (284)
T 1rp0_A 41 DVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGA 79 (284)
T ss_dssp EEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTTT
T ss_pred CEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCce
Confidence 799999999999999999997 99999999999888743
No 349
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=98.77 E-value=1.5e-08 Score=116.17 Aligned_cols=38 Identities=39% Similarity=0.555 Sum_probs=36.2
Q ss_pred cEEEECCChHHHHHHHHHHhCCCeEEEEecCCCCCCCc
Q 035870 2 RVAVIGAGISGLVSAYVLAKAGVEVVLYEKDDYLGGHA 39 (842)
Q Consensus 2 dV~IIGaGiaGLsaA~~L~~~G~~V~VlEa~~~~GG~~ 39 (842)
||+|||||++||+||+.|++.|++|+|+|+++.+||..
T Consensus 18 dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GG~w 55 (542)
T 1w4x_A 18 DVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGGVW 55 (542)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHH
T ss_pred CEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCcc
Confidence 79999999999999999999999999999999999854
No 350
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=98.77 E-value=6.2e-08 Score=111.39 Aligned_cols=58 Identities=7% Similarity=-0.092 Sum_probs=47.3
Q ss_pred hhHHHHHHHHHhhhcCceEEeCCCeeEEEeCCCcE-EEEeC---CCc--EEeCCEEEEccChHH
Q 035870 214 SHSYVNKVRKQLESWGCQIRTSSEVCSVLPADKGC-TIVCG---DGS--REFYNSCVMALHAPD 271 (842)
Q Consensus 214 ~~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v-~V~~~---~G~--~~~ad~VV~A~p~~~ 271 (842)
...++..+++.+.+.|++|+.+++|++|..+++++ .|++. +|+ ++.||.||+|+.++.
T Consensus 187 ~~~l~~~l~~~a~~~Ga~i~~~t~V~~l~~~~~~v~gV~~~d~~tg~~~~i~A~~VV~AaG~ws 250 (571)
T 2rgh_A 187 DARLVIDNIKKAAEDGAYLVSKMKAVGFLYEGDQIVGVKARDLLTDEVIEIKAKLVINTSGPWV 250 (571)
T ss_dssp HHHHHHHHHHHHHHTTCEEESSEEEEEEEEETTEEEEEEEEETTTCCEEEEEBSCEEECCGGGH
T ss_pred hHHHHHHHHHHHHHcCCeEEeccEEEEEEEeCCEEEEEEEEEcCCCCEEEEEcCEEEECCChhH
Confidence 45788889999989999999999999999988764 45542 333 699999999998874
No 351
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=98.77 E-value=1.1e-08 Score=109.66 Aligned_cols=53 Identities=13% Similarity=0.245 Sum_probs=43.8
Q ss_pred HHHHHHHHHhhhcCceEEeCCCeeEEEeCCC-cEEEEeCCCcEEeCCEEEEccCh
Q 035870 216 SYVNKVRKQLESWGCQIRTSSEVCSVLPADK-GCTIVCGDGSREFYNSCVMALHA 269 (842)
Q Consensus 216 ~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~-~v~V~~~~G~~~~ad~VV~A~p~ 269 (842)
.+.+.+.+.+++.|++++++++|++|..+++ .+.|++.+|+ +.+|+||+|+..
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g~-~~~d~vVlAtG~ 121 (332)
T 3lzw_A 68 ELINNLKEQMAKFDQTICLEQAVESVEKQADGVFKLVTNEET-HYSKTVIITAGN 121 (332)
T ss_dssp HHHHHHHHHHTTSCCEEECSCCEEEEEECTTSCEEEEESSEE-EEEEEEEECCTT
T ss_pred HHHHHHHHHHHHhCCcEEccCEEEEEEECCCCcEEEEECCCE-EEeCEEEECCCC
Confidence 3444555666666899999999999999877 6899999885 999999999876
No 352
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.76 E-value=1.5e-08 Score=108.80 Aligned_cols=53 Identities=8% Similarity=0.068 Sum_probs=43.5
Q ss_pred HHHHHHHHhhhcCceEEeCCCeeEEEeCCCcEEEEeCCCcEEeCCEEEEccCh
Q 035870 217 YVNKVRKQLESWGCQIRTSSEVCSVLPADKGCTIVCGDGSREFYNSCVMALHA 269 (842)
Q Consensus 217 l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VV~A~p~ 269 (842)
+.+.+.+.+++.+.+++++++|++|+.+++.+.|++.+|+++.+|+||+|+..
T Consensus 67 ~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~v~~~~g~~~~~~~lv~AtG~ 119 (335)
T 2zbw_A 67 LVKGLVEQVAPFNPVYSLGERAETLEREGDLFKVTTSQGNAYTAKAVIIAAGV 119 (335)
T ss_dssp HHHHHHHHHGGGCCEEEESCCEEEEEEETTEEEEEETTSCEEEEEEEEECCTT
T ss_pred HHHHHHHHHHHcCCEEEeCCEEEEEEECCCEEEEEECCCCEEEeCEEEECCCC
Confidence 33344555556688999999999999988788999988888999999999875
No 353
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=98.76 E-value=2.6e-08 Score=112.72 Aligned_cols=55 Identities=11% Similarity=0.055 Sum_probs=43.2
Q ss_pred HHHHHHHHHhhhcCceEEeCCCeeEEEeC---CCcEEEEe--C-CC--cEEeCCEEEEccChH
Q 035870 216 SYVNKVRKQLESWGCQIRTSSEVCSVLPA---DKGCTIVC--G-DG--SREFYNSCVMALHAP 270 (842)
Q Consensus 216 ~l~~~L~~~l~~~G~~i~~~~~V~~I~~~---~~~v~V~~--~-~G--~~~~ad~VV~A~p~~ 270 (842)
.+.+.|.+.+++.|++|+++++|++|..+ ++++.|++ . +| +++.||.||+|+...
T Consensus 167 ~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~~~g~~~~i~ad~VV~A~G~~ 229 (497)
T 2bry_A 167 QLQLLLLKVALLLGVEIHWGVKFTGLQPPPRKGSGWRAQLQPNPPAQLASYEFDVLISAAGGK 229 (497)
T ss_dssp HHHHHHHHHHHHTTCEEEESCEEEEEECCCSTTCCBEEEEESCCCHHHHTCCBSEEEECCCTT
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEEEEecCCCCEEEEEEEECCCCCEEEEEcCEEEECCCCC
Confidence 45566777777779999999999999875 34577776 4 66 478999999998765
No 354
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.76 E-value=2e-08 Score=112.64 Aligned_cols=55 Identities=18% Similarity=0.221 Sum_probs=48.6
Q ss_pred hhHHHHHHHHHhhhcCceEEeCCCeeEEEeCCCcEEEEeCCCcEEeCCEEEEccCh
Q 035870 214 SHSYVNKVRKQLESWGCQIRTSSEVCSVLPADKGCTIVCGDGSREFYNSCVMALHA 269 (842)
Q Consensus 214 ~~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VV~A~p~ 269 (842)
...+.+.+.+.+++.|++|+++++|++|+..++++.|.+.+| ++.||.||+|++.
T Consensus 188 d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~v~~~~g-~i~aD~Vv~A~G~ 242 (452)
T 3oc4_A 188 DKEMVAEVQKSLEKQAVIFHFEETVLGIEETANGIVLETSEQ-EISCDSGIFALNL 242 (452)
T ss_dssp CHHHHHHHHHHHHTTTEEEEETCCEEEEEECSSCEEEEESSC-EEEESEEEECSCC
T ss_pred CHHHHHHHHHHHHHcCCEEEeCCEEEEEEccCCeEEEEECCC-EEEeCEEEECcCC
Confidence 356788889999999999999999999998888888888877 8999999999874
No 355
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=98.75 E-value=3.5e-08 Score=95.51 Aligned_cols=99 Identities=9% Similarity=0.024 Sum_probs=79.8
Q ss_pred CCCeEEEeccCchHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHHcCC--CCCeEEEEccccCC---------------
Q 035870 629 KGQEVLEIGCGWGTLAIEIVKRTGCKYTGITLSEEQLKYAEMKVKEAGL--QDLIRLYLCDYRQL--------------- 691 (842)
Q Consensus 629 ~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~~l--~~~v~~~~~d~~~~--------------- 691 (842)
+.++||||||| ..++.+|+..+.+|+.+|.+++..+.|+++++++|+ .++|+++.+|+.+.
T Consensus 30 ~a~~VLEiGtG--ySTl~lA~~~~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~~~~~wg~p~~~~~~~~l 107 (202)
T 3cvo_A 30 EAEVILEYGSG--GSTVVAAELPGKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDIGPTGDWGHPVSDAKWRSY 107 (202)
T ss_dssp HCSEEEEESCS--HHHHHHHTSTTCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCSSBCGGGCBSSSTTGGGT
T ss_pred CCCEEEEECch--HHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCchhhhcccccccchhhhhH
Confidence 56799999985 677778875578999999999999999999999998 78999999996432
Q ss_pred c----------cCCCccEEEEcchhhhcChhhHHHHHHHHHhccccCcEEEEEee
Q 035870 692 A----------KANKYDRIISCEMIEAVGHEFMEEFFGCCESLLAEDGLLVLQFI 736 (842)
Q Consensus 692 ~----------~~~~fD~i~s~~~~~~~~~~~~~~~~~~~~~~LkpgG~~~~~~~ 736 (842)
+ ..++||+|+.-.-. ...++..+.++|+|||++++..+
T Consensus 108 ~~~~~~i~~~~~~~~fDlIfIDg~k-------~~~~~~~~l~~l~~GG~Iv~DNv 155 (202)
T 3cvo_A 108 PDYPLAVWRTEGFRHPDVVLVDGRF-------RVGCALATAFSITRPVTLLFDDY 155 (202)
T ss_dssp THHHHGGGGCTTCCCCSEEEECSSS-------HHHHHHHHHHHCSSCEEEEETTG
T ss_pred HHHhhhhhccccCCCCCEEEEeCCC-------chhHHHHHHHhcCCCeEEEEeCC
Confidence 1 23789999987531 24666667799999999988554
No 356
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=98.75 E-value=6.7e-09 Score=118.57 Aligned_cols=38 Identities=34% Similarity=0.663 Sum_probs=36.1
Q ss_pred cEEEECCChHHHHHHHHHHhCCCeEEEEecCCCCCCCc
Q 035870 2 RVAVIGAGISGLVSAYVLAKAGVEVVLYEKDDYLGGHA 39 (842)
Q Consensus 2 dV~IIGaGiaGLsaA~~L~~~G~~V~VlEa~~~~GG~~ 39 (842)
||+|||||++||+||+.|++.|++|+|+|+++.+||..
T Consensus 11 dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~GGtw 48 (545)
T 3uox_A 11 DAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDVGGTW 48 (545)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHH
T ss_pred CEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCcc
Confidence 79999999999999999999999999999999999953
No 357
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=98.75 E-value=3.2e-08 Score=111.91 Aligned_cols=55 Identities=13% Similarity=0.141 Sum_probs=49.8
Q ss_pred hHHHHHHHHHhhhcCceEEeCCCeeEEEeCCCcEEEEeCCCcEEeCCEEEEccCh
Q 035870 215 HSYVNKVRKQLESWGCQIRTSSEVCSVLPADKGCTIVCGDGSREFYNSCVMALHA 269 (842)
Q Consensus 215 ~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VV~A~p~ 269 (842)
..+.+.+.+.+++.|++|+++++|++|+.+++++.|++.+|+++.||.||+|++.
T Consensus 232 ~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~aD~Vi~A~G~ 286 (484)
T 3o0h_A 232 YDLRQLLNDAMVAKGISIIYEATVSQVQSTENCYNVVLTNGQTICADRVMLATGR 286 (484)
T ss_dssp HHHHHHHHHHHHHHTCEEESSCCEEEEEECSSSEEEEETTSCEEEESEEEECCCE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEeeCCEEEEEECCCcEEEcCEEEEeeCC
Confidence 4677888888888899999999999999988889999999989999999999874
No 358
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.74 E-value=2.8e-08 Score=112.65 Aligned_cols=148 Identities=11% Similarity=0.050 Sum_probs=96.5
Q ss_pred hcCChHHHHhccCCCCc---ccccccCCCcccHHHHHHHHHHHHHHHcCCCCCCeEEEeccCchHHHHHHHHhc------
Q 035870 581 YDLSNELFSLFLDESMT---YSCAVFKSEDEDLKAAQMRKVSLLIEKARVSKGQEVLEIGCGWGTLAIEIVKRT------ 651 (842)
Q Consensus 581 Yd~~~~~~~~~l~~~~~---ys~~~~~~~~~~l~~aq~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~la~~~------ 651 (842)
.|...+.|+.++..... -..+.|-++ ....+.|++.+...++.+|||.+||+|.+...+++..
T Consensus 126 ~d~lG~~YE~ll~~~a~~~~~~~G~fyTP--------~~iv~~mv~~l~p~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~ 197 (541)
T 2ar0_A 126 RDDFGDMYEGLLQKNANETKSGAGQYFTP--------RPLIKTIIHLLKPQPREVVQDPAAGTAGFLIEADRYVKSQTND 197 (541)
T ss_dssp ------------------------CCCCC--------HHHHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTTTT
T ss_pred hhHHHHHHHHHHHHHHHhccccCCeeeCC--------HHHHHHHHHHhccCCCCeEecCCcccchHHHHHHHHHHHhhcc
Confidence 45566677776653211 012222222 2234556777777889999999999999999888651
Q ss_pred -------------CCEEEEEcCCHHHHHHHHHHHHHcCCCC----CeEEEEccccCCc--cCCCccEEEEcchhhhcCh-
Q 035870 652 -------------GCKYTGITLSEEQLKYAEMKVKEAGLQD----LIRLYLCDYRQLA--KANKYDRIISCEMIEAVGH- 711 (842)
Q Consensus 652 -------------~~~v~gid~s~~~~~~a~~~~~~~~l~~----~v~~~~~d~~~~~--~~~~fD~i~s~~~~~~~~~- 711 (842)
..+++|+|+++.+++.|+.++...|+.. ++.+.++|....+ ..++||+|+++..+.....
T Consensus 198 ~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l~gi~~~~~~~~~I~~gDtL~~~~~~~~~fD~Vv~NPPf~~~~~~ 277 (541)
T 2ar0_A 198 LDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLHDIEGNLDHGGAIRLGNTLGSDGENLPKAHIVATNPPFGSAAGT 277 (541)
T ss_dssp TTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHTTTCCCBGGGTBSEEESCTTSHHHHTSCCEEEEEECCCCTTCSSC
T ss_pred cccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHHhCCCccccccCCeEeCCCcccccccccCCeEEEECCCcccccch
Confidence 2479999999999999999988877753 2789999976544 3578999999987654421
Q ss_pred -----------hhHHHHHHHHHhccccCcEEEEEee
Q 035870 712 -----------EFMEEFFGCCESLLAEDGLLVLQFI 736 (842)
Q Consensus 712 -----------~~~~~~~~~~~~~LkpgG~~~~~~~ 736 (842)
+....+++.+.+.|||||++.+...
T Consensus 278 ~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~a~V~p 313 (541)
T 2ar0_A 278 NITRTFVHPTSNKQLCFMQHIIETLHPGGRAAVVVP 313 (541)
T ss_dssp CCCSCCSSCCSCHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hhHhhcCCCCCchHHHHHHHHHHHhCCCCEEEEEec
Confidence 1124789999999999999887543
No 359
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=98.72 E-value=1.2e-07 Score=108.67 Aligned_cols=55 Identities=13% Similarity=0.131 Sum_probs=47.4
Q ss_pred hHHHHHHHHHhhhcCceEEeCCCeeEEEeCCCc--EEEEeCCCcEEeCCEEEEccChH
Q 035870 215 HSYVNKVRKQLESWGCQIRTSSEVCSVLPADKG--CTIVCGDGSREFYNSCVMALHAP 270 (842)
Q Consensus 215 ~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~--v~V~~~~G~~~~ad~VV~A~p~~ 270 (842)
..+.+.|.+.+++.|++++.+ +|++|..++++ +.|++.+|+++.||.||.|+...
T Consensus 165 ~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~A~G~~ 221 (538)
T 2aqj_A 165 HLVADFLKRWAVERGVNRVVD-EVVDVRLNNRGYISNLLTKEGRTLEADLFIDCSGMR 221 (538)
T ss_dssp HHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEETTSCEECCSEEEECCGGG
T ss_pred HHHHHHHHHHHHHCCCEEEEe-eEeEEEEcCCCcEEEEEECCCcEEEeCEEEECCCCc
Confidence 578888888888889999999 89999987654 57888888889999999998765
No 360
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.72 E-value=7e-08 Score=106.86 Aligned_cols=56 Identities=11% Similarity=0.128 Sum_probs=49.5
Q ss_pred hhHHHHHHHHHhhhcCceEEeCCCeeEEEeCCCcE-EEEeCCCcEEeCCEEEEccCh
Q 035870 214 SHSYVNKVRKQLESWGCQIRTSSEVCSVLPADKGC-TIVCGDGSREFYNSCVMALHA 269 (842)
Q Consensus 214 ~~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v-~V~~~~G~~~~ad~VV~A~p~ 269 (842)
...+.+.+.+.++++|++|+++++|++|..+++++ .|++.+|+++.||.||+|+..
T Consensus 193 ~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~~v~l~dG~~i~aD~Vv~a~G~ 249 (415)
T 3lxd_A 193 GEALSEFYQAEHRAHGVDLRTGAAMDCIEGDGTKVTGVRMQDGSVIPADIVIVGIGI 249 (415)
T ss_dssp CHHHHHHHHHHHHHTTCEEEETCCEEEEEESSSBEEEEEESSSCEEECSEEEECSCC
T ss_pred CHHHHHHHHHHHHhCCCEEEECCEEEEEEecCCcEEEEEeCCCCEEEcCEEEECCCC
Confidence 45778888888889999999999999999887776 788999999999999999874
No 361
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=98.72 E-value=2.3e-08 Score=108.53 Aligned_cols=52 Identities=13% Similarity=0.089 Sum_probs=42.7
Q ss_pred HHHHHHHhhhcCceEEeCCCeeEEEeCCC-cEEEEeCCCcEEeCCEEEEccCh
Q 035870 218 VNKVRKQLESWGCQIRTSSEVCSVLPADK-GCTIVCGDGSREFYNSCVMALHA 269 (842)
Q Consensus 218 ~~~L~~~l~~~G~~i~~~~~V~~I~~~~~-~v~V~~~~G~~~~ad~VV~A~p~ 269 (842)
.+.+.+.+++.|++++++++|++|..+++ .+.|++.+|+++.||.||+|+..
T Consensus 77 ~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~li~AtG~ 129 (360)
T 3ab1_A 77 VESLWAQAERYNPDVVLNETVTKYTKLDDGTFETRTNTGNVYRSRAVLIAAGL 129 (360)
T ss_dssp HHHHHHHHHTTCCEEECSCCEEEEEECTTSCEEEEETTSCEEEEEEEEECCTT
T ss_pred HHHHHHHHHHhCCEEEcCCEEEEEEECCCceEEEEECCCcEEEeeEEEEccCC
Confidence 33445555556889999999999998766 68999999988999999999875
No 362
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.72 E-value=6.3e-08 Score=109.15 Aligned_cols=56 Identities=18% Similarity=0.131 Sum_probs=50.0
Q ss_pred hhHHHHHHHHHhhhcCceEEeCCCeeEEEeCCCcEEEEeCCCcEEeCCEEEEccCh
Q 035870 214 SHSYVNKVRKQLESWGCQIRTSSEVCSVLPADKGCTIVCGDGSREFYNSCVMALHA 269 (842)
Q Consensus 214 ~~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VV~A~p~ 269 (842)
...+.+.+.+.+++.|++|+++++|++|+.+++++.|++.+|+++.||.||+|+..
T Consensus 201 ~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~v~~~~g~~i~aD~Vv~a~G~ 256 (472)
T 3iwa_A 201 SKSLSQMLRHDLEKNDVVVHTGEKVVRLEGENGKVARVITDKRTLDADLVILAAGV 256 (472)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEESSCEEECSEEEECSCE
T ss_pred CHHHHHHHHHHHHhcCCEEEeCCEEEEEEccCCeEEEEEeCCCEEEcCEEEECCCC
Confidence 45688888889999999999999999999888888888889989999999999874
No 363
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=98.71 E-value=3.3e-08 Score=110.69 Aligned_cols=40 Identities=40% Similarity=0.589 Sum_probs=37.0
Q ss_pred CcEEEECCChHHHHHHHHHHhCCC--eEEEEecCCCCCCCce
Q 035870 1 MRVAVIGAGISGLVSAYVLAKAGV--EVVLYEKDDYLGGHAK 40 (842)
Q Consensus 1 kdV~IIGaGiaGLsaA~~L~~~G~--~V~VlEa~~~~GG~~~ 40 (842)
+||+|||||++||+||..|++.|. +|+|||+++.+||...
T Consensus 7 ~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~~GG~~~ 48 (447)
T 2gv8_A 7 RKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPGGVWN 48 (447)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSSSSTTCS
T ss_pred CEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCCCCCeec
Confidence 489999999999999999999999 9999999999998543
No 364
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=98.71 E-value=5.2e-08 Score=109.55 Aligned_cols=55 Identities=16% Similarity=0.184 Sum_probs=48.2
Q ss_pred hhHHHHHHHHHhhhcCceEEeCCCeeEEEeCCCc-EEEE-eCCCcEEeCCEEEEccCh
Q 035870 214 SHSYVNKVRKQLESWGCQIRTSSEVCSVLPADKG-CTIV-CGDGSREFYNSCVMALHA 269 (842)
Q Consensus 214 ~~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~-v~V~-~~~G~~~~ad~VV~A~p~ 269 (842)
...+.+.+.+.+++.|++|+++++|++|..++++ +.|+ +.+|+ +.||.||+|++.
T Consensus 210 ~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~g~-i~aD~Vv~a~G~ 266 (463)
T 4dna_A 210 DQDMRRGLHAAMEEKGIRILCEDIIQSVSADADGRRVATTMKHGE-IVADQVMLALGR 266 (463)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSCCEEEEEECTTSCEEEEESSSCE-EEESEEEECSCE
T ss_pred CHHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCCEEEEEEcCCCe-EEeCEEEEeeCc
Confidence 4567888889999999999999999999988666 6888 88997 999999999874
No 365
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.71 E-value=5.5e-08 Score=113.74 Aligned_cols=118 Identities=19% Similarity=0.249 Sum_probs=92.6
Q ss_pred HHHHHHHcCCCCCCeEEEeccCchHHHHHHHHhc-------------------------------------------CCE
Q 035870 618 VSLLIEKARVSKGQEVLEIGCGWGTLAIEIVKRT-------------------------------------------GCK 654 (842)
Q Consensus 618 ~~~l~~~l~~~~~~~vLDiGcG~G~~~~~la~~~-------------------------------------------~~~ 654 (842)
...++.....+++.+|||.+||+|.+++.+|... ..+
T Consensus 179 Aa~ll~~~~~~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~~~ 258 (703)
T 3v97_A 179 AAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSH 258 (703)
T ss_dssp HHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_pred HHHHHHhhCCCCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCCcc
Confidence 3456777788899999999999999999988641 258
Q ss_pred EEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCc-c--CCCccEEEEcchhh-hcC-hhhHHHHHHHHHhcc---c
Q 035870 655 YTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLA-K--ANKYDRIISCEMIE-AVG-HEFMEEFFGCCESLL---A 726 (842)
Q Consensus 655 v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~-~--~~~fD~i~s~~~~~-~~~-~~~~~~~~~~~~~~L---k 726 (842)
|+|+|+++.+++.|++++..+|+.+.+++.++|+.++. + .++||+|++|..+. -++ .+....+++.+.+.| .
T Consensus 259 i~G~Did~~av~~A~~N~~~agv~~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly~~l~~~lk~~~ 338 (703)
T 3v97_A 259 FYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQF 338 (703)
T ss_dssp EEEEESCHHHHHHHHHHHHHTTCGGGEEEEECCGGGCCCSCTTCCCCEEEECCCCCC---CCHHHHHHHHHHHHHHHHHC
T ss_pred EEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCccccccCCCCEEEeCCCccccccchhHHHHHHHHHHHHHHhhC
Confidence 99999999999999999999999888999999999885 2 23899999997753 222 224555666555554 4
Q ss_pred cCcEEEEEe
Q 035870 727 EDGLLVLQF 735 (842)
Q Consensus 727 pgG~~~~~~ 735 (842)
|||.+++.+
T Consensus 339 ~g~~~~ilt 347 (703)
T 3v97_A 339 GGWNLSLFS 347 (703)
T ss_dssp TTCEEEEEE
T ss_pred CCCeEEEEe
Confidence 799988854
No 366
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.71 E-value=5.5e-09 Score=106.00 Aligned_cols=105 Identities=10% Similarity=0.132 Sum_probs=76.3
Q ss_pred HHHHHHcCCCCC--CeEEEeccCchHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHHc-------C-CCCCeEEEEccc
Q 035870 619 SLLIEKARVSKG--QEVLEIGCGWGTLAIEIVKRTGCKYTGITLSEEQLKYAEMKVKEA-------G-LQDLIRLYLCDY 688 (842)
Q Consensus 619 ~~l~~~l~~~~~--~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~-------~-l~~~v~~~~~d~ 688 (842)
+.+.+.+.++++ .+|||++||+|..++.+|+. +++|+++|+|+.+++.++++++.. + +.++++++++|.
T Consensus 76 e~l~~al~l~~g~~~~VLDl~~G~G~dal~lA~~-g~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~ 154 (258)
T 2oyr_A 76 EAVAKAVGIKGDYLPDVVDATAGLGRDAFVLASV-GCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASS 154 (258)
T ss_dssp SHHHHHTTCBTTBCCCEEETTCTTCHHHHHHHHH-TCCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCH
T ss_pred HHHHHHhcccCCCCCEEEEcCCcCCHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCH
Confidence 456677777777 99999999999999999998 889999999999877777765432 1 324799999998
Q ss_pred cCC-c-cCCCccEEEEcchhhhcChhhHHHHHHHHHhcccc
Q 035870 689 RQL-A-KANKYDRIISCEMIEAVGHEFMEEFFGCCESLLAE 727 (842)
Q Consensus 689 ~~~-~-~~~~fD~i~s~~~~~~~~~~~~~~~~~~~~~~Lkp 727 (842)
.++ + ..++||+|++..++.+-.. ...+++..++|++
T Consensus 155 ~~~L~~~~~~fDvV~lDP~y~~~~~---saavkk~~~~lr~ 192 (258)
T 2oyr_A 155 LTALTDITPRPQVVYLDPMFPHKQK---SALVKKEMRVFQS 192 (258)
T ss_dssp HHHSTTCSSCCSEEEECCCCCCCCC--------HHHHHHHH
T ss_pred HHHHHhCcccCCEEEEcCCCCCccc---chHHHHHHHHHHH
Confidence 764 2 2347999999999876432 2334444444444
No 367
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.71 E-value=2e-08 Score=110.86 Aligned_cols=56 Identities=9% Similarity=0.124 Sum_probs=49.4
Q ss_pred hhHHHHHHHHHhhhcCceEEeCCCeeEEEeCCCcE-EEEeCCCcEEeCCEEEEccCh
Q 035870 214 SHSYVNKVRKQLESWGCQIRTSSEVCSVLPADKGC-TIVCGDGSREFYNSCVMALHA 269 (842)
Q Consensus 214 ~~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v-~V~~~~G~~~~ad~VV~A~p~ 269 (842)
...+.+.+.+.++++|++|+++++|++|..+++++ .|++.+|+++.||.||+|+..
T Consensus 183 ~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~~V~~~dG~~i~aD~Vv~a~G~ 239 (404)
T 3fg2_P 183 TPEISSYFHDRHSGAGIRMHYGVRATEIAAEGDRVTGVVLSDGNTLPCDLVVVGVGV 239 (404)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTSCEEECSEEEECCCE
T ss_pred CHHHHHHHHHHHHhCCcEEEECCEEEEEEecCCcEEEEEeCCCCEEEcCEEEECcCC
Confidence 45778888888999999999999999999877765 688999999999999999874
No 368
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=98.70 E-value=3.9e-09 Score=116.59 Aligned_cols=57 Identities=11% Similarity=-0.007 Sum_probs=44.1
Q ss_pred hhHHHHHHHHHhhhcCceEEeCCCee---------EEEeCCCcEEEEeCCCcEEeCCEEEEccChHH
Q 035870 214 SHSYVNKVRKQLESWGCQIRTSSEVC---------SVLPADKGCTIVCGDGSREFYNSCVMALHAPD 271 (842)
Q Consensus 214 ~~~l~~~L~~~l~~~G~~i~~~~~V~---------~I~~~~~~v~V~~~~G~~~~ad~VV~A~p~~~ 271 (842)
...+.+.|.+.+++.|++|+++++|+ +|..++++|.|++.+| ++.||.||+|+..+.
T Consensus 171 ~~~l~~~L~~~~~~~Gv~i~~~~~v~~~~g~~~~~~i~~~~~~v~v~~~~g-~i~a~~VV~A~G~~s 236 (405)
T 3c4n_A 171 PGSLALLAAQQAIGQGAGLLLNTRAELVPGGVRLHRLTVTNTHQIVVHETR-QIRAGVIIVAAGAAG 236 (405)
T ss_dssp HHHHHHHHHHHHHTTTCEEECSCEEEEETTEEEEECBCC-------CBCCE-EEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHHCCCEEEcCCEEEeccccccccceEeeCCeEEEEECCc-EEECCEEEECCCccH
Confidence 35788999999999999999999999 9988888888888777 899999999998763
No 369
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.70 E-value=2.8e-08 Score=102.44 Aligned_cols=86 Identities=20% Similarity=0.286 Sum_probs=69.9
Q ss_pred HHHHHHHHHcCCCCCCeEEEeccCchHHHHHHHHhcCCE----EEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCC
Q 035870 616 RKVSLLIEKARVSKGQEVLEIGCGWGTLAIEIVKRTGCK----YTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQL 691 (842)
Q Consensus 616 ~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~----v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~ 691 (842)
..++.+++.+.+.++++|||||||+|.++..+++. +.+ |+++|+|+++++.++++. .++++++++|+.++
T Consensus 29 ~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~-~~~~~~~V~avDid~~~l~~a~~~~-----~~~v~~i~~D~~~~ 102 (279)
T 3uzu_A 29 GVIDAIVAAIRPERGERMVEIGPGLGALTGPVIAR-LATPGSPLHAVELDRDLIGRLEQRF-----GELLELHAGDALTF 102 (279)
T ss_dssp HHHHHHHHHHCCCTTCEEEEECCTTSTTHHHHHHH-HCBTTBCEEEEECCHHHHHHHHHHH-----GGGEEEEESCGGGC
T ss_pred HHHHHHHHhcCCCCcCEEEEEccccHHHHHHHHHh-CCCcCCeEEEEECCHHHHHHHHHhc-----CCCcEEEECChhcC
Confidence 34567888889999999999999999999999988 445 999999999999999983 24899999999988
Q ss_pred ccCC-------CccEEEEcchhh
Q 035870 692 AKAN-------KYDRIISCEMIE 707 (842)
Q Consensus 692 ~~~~-------~fD~i~s~~~~~ 707 (842)
+... ..+.|++|..+.
T Consensus 103 ~~~~~~~~~~~~~~~vv~NlPY~ 125 (279)
T 3uzu_A 103 DFGSIARPGDEPSLRIIGNLPYN 125 (279)
T ss_dssp CGGGGSCSSSSCCEEEEEECCHH
T ss_pred ChhHhcccccCCceEEEEccCcc
Confidence 7211 234678775543
No 370
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=98.69 E-value=1.6e-07 Score=108.31 Aligned_cols=57 Identities=12% Similarity=0.040 Sum_probs=45.6
Q ss_pred hHHHHHHHHHhhhcCceEEeCCCeeEEEeC-CCcE-EEEe---CCCc--EEeCCEEEEccChHH
Q 035870 215 HSYVNKVRKQLESWGCQIRTSSEVCSVLPA-DKGC-TIVC---GDGS--REFYNSCVMALHAPD 271 (842)
Q Consensus 215 ~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~-~~~v-~V~~---~~G~--~~~ad~VV~A~p~~~ 271 (842)
..+.+.|.+.+++.|++|+++++|++|..+ ++++ .|.. .+|+ ++.|+.||+|+....
T Consensus 143 ~~l~~~L~~~~~~~gv~i~~~~~v~~L~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGg~~ 206 (588)
T 2wdq_A 143 HALLHTLYQQNLKNHTTIFSEWYALDLVKNQDGAVVGCTALCIETGEVVYFKARATVLATGGAG 206 (588)
T ss_dssp HHHHHHHHHHHHHTTCEEEETEEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEEEECCCCCG
T ss_pred HHHHHHHHHHHHhCCCEEEeCcEEEEEEECCCCEEEEEEEEEcCCCeEEEEEcCEEEECCCCCc
Confidence 578899999998889999999999999986 5554 3332 5675 589999999997653
No 371
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.69 E-value=8.6e-08 Score=108.80 Aligned_cols=56 Identities=13% Similarity=0.167 Sum_probs=49.5
Q ss_pred hHHHHHHHHHhhhcCceEEeCCCeeEEEeCCCcEEEEeCCCcEEeCCEEEEccChH
Q 035870 215 HSYVNKVRKQLESWGCQIRTSSEVCSVLPADKGCTIVCGDGSREFYNSCVMALHAP 270 (842)
Q Consensus 215 ~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VV~A~p~~ 270 (842)
..+.+.+.+.+++.|++|+++++|++|..+++++.|++.+|+++.||.||+|+...
T Consensus 223 ~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~v~v~~~~g~~i~aD~Vv~a~G~~ 278 (499)
T 1xdi_A 223 ADAALVLEESFAERGVRLFKNARAASVTRTGAGVLVTMTDGRTVEGSHALMTIGSV 278 (499)
T ss_dssp HHHHHHHHHHHHHTTCEEETTCCEEEEEECSSSEEEEETTSCEEEESEEEECCCEE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCEEEEEECCCcEEEcCEEEECCCCC
Confidence 36778888889899999999999999998887888888899899999999998743
No 372
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.69 E-value=5.8e-08 Score=105.69 Aligned_cols=54 Identities=13% Similarity=0.078 Sum_probs=44.9
Q ss_pred HHHHHHHHHhhhcCceEEeCCCeeEEEeCCCcEEEEeCCCcEEeCCEEEEccChH
Q 035870 216 SYVNKVRKQLESWGCQIRTSSEVCSVLPADKGCTIVCGDGSREFYNSCVMALHAP 270 (842)
Q Consensus 216 ~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VV~A~p~~ 270 (842)
.+.+.+.+.+++.|++++++++|++|..+++++.|.+.+| ++.||+||+|+...
T Consensus 89 ~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g-~~~~d~vVlAtG~~ 142 (369)
T 3d1c_A 89 TYAEYLQVVANHYELNIFENTVVTNISADDAYYTIATTTE-TYHADYIFVATGDY 142 (369)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEECSSSEEEEESSC-CEEEEEEEECCCST
T ss_pred HHHHHHHHHHHHcCCeEEeCCEEEEEEECCCeEEEEeCCC-EEEeCEEEECCCCC
Confidence 4555556666666999999999999999888899998887 69999999999865
No 373
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=98.68 E-value=2e-08 Score=108.35 Aligned_cols=77 Identities=16% Similarity=0.154 Sum_probs=67.8
Q ss_pred CCCCeEEEeccCchHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHHc--CCCCCeEEEEccccCCc---cCCCccEEEE
Q 035870 628 SKGQEVLEIGCGWGTLAIEIVKRTGCKYTGITLSEEQLKYAEMKVKEA--GLQDLIRLYLCDYRQLA---KANKYDRIIS 702 (842)
Q Consensus 628 ~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~--~l~~~v~~~~~d~~~~~---~~~~fD~i~s 702 (842)
.+|.+|||+|||+|..+..+++. +.+|+++|+|+.+++.|+++++.+ |+ ++++++++|+.+.. ++++||+|++
T Consensus 92 ~~g~~VLDLgcG~G~~al~LA~~-g~~V~~VD~s~~~l~~Ar~N~~~~~~gl-~~i~~i~~Da~~~L~~~~~~~fDvV~l 169 (410)
T 3ll7_A 92 REGTKVVDLTGGLGIDFIALMSK-ASQGIYIERNDETAVAARHNIPLLLNEG-KDVNILTGDFKEYLPLIKTFHPDYIYV 169 (410)
T ss_dssp CTTCEEEESSCSSSHHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHHSCTT-CEEEEEESCGGGSHHHHHHHCCSEEEE
T ss_pred CCCCEEEEeCCCchHHHHHHHhc-CCEEEEEECCHHHHHHHHHhHHHhccCC-CcEEEEECcHHHhhhhccCCCceEEEE
Confidence 46899999999999999999987 789999999999999999999988 87 58999999998853 2368999999
Q ss_pred cchh
Q 035870 703 CEMI 706 (842)
Q Consensus 703 ~~~~ 706 (842)
....
T Consensus 170 DPPr 173 (410)
T 3ll7_A 170 DPAR 173 (410)
T ss_dssp CCEE
T ss_pred CCCC
Confidence 7543
No 374
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=98.68 E-value=6.9e-08 Score=108.22 Aligned_cols=56 Identities=16% Similarity=0.092 Sum_probs=44.6
Q ss_pred HHHHHHHHHhhhcCceEEeCCCeeEEEeCCCcEE-EEeC---CCc--EEeCCEEEEccChHH
Q 035870 216 SYVNKVRKQLESWGCQIRTSSEVCSVLPADKGCT-IVCG---DGS--REFYNSCVMALHAPD 271 (842)
Q Consensus 216 ~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v~-V~~~---~G~--~~~ad~VV~A~p~~~ 271 (842)
.+.+.|.+.+++.|++|+++++|++|..+++++. |++. +|+ ++.||.||.|.....
T Consensus 101 ~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~G~~~~~~ad~VV~AdG~~s 162 (453)
T 3atr_A 101 LYNQRVLKEAQDRGVEIWDLTTAMKPIFEDGYVKGAVLFNRRTNEELTVYSKVVVEATGYSR 162 (453)
T ss_dssp HHHHHHHHHHHHTTCEEESSEEEEEEEEETTEEEEEEEEETTTTEEEEEECSEEEECCGGGC
T ss_pred HHHHHHHHHHHHcCCEEEeCcEEEEEEEECCEEEEEEEEEcCCCceEEEEcCEEEECcCCch
Confidence 5666777777777999999999999999888753 4443 676 789999999987553
No 375
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.67 E-value=6.6e-08 Score=98.21 Aligned_cols=85 Identities=15% Similarity=0.220 Sum_probs=69.8
Q ss_pred HHHHHHHHHcCCCCCCeEEEeccCchHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCc-cC
Q 035870 616 RKVSLLIEKARVSKGQEVLEIGCGWGTLAIEIVKRTGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLA-KA 694 (842)
Q Consensus 616 ~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~-~~ 694 (842)
..++.+++.+.+.++++|||||||+|.++..+++.+..+|+++|+|+.+++.++++ . ..+++++++|+.+++ ++
T Consensus 18 ~i~~~iv~~~~~~~~~~VLDiG~G~G~lt~~L~~~~~~~v~avEid~~~~~~~~~~-~----~~~v~~i~~D~~~~~~~~ 92 (249)
T 3ftd_A 18 GVLKKIAEELNIEEGNTVVEVGGGTGNLTKVLLQHPLKKLYVIELDREMVENLKSI-G----DERLEVINEDASKFPFCS 92 (249)
T ss_dssp HHHHHHHHHTTCCTTCEEEEEESCHHHHHHHHTTSCCSEEEEECCCHHHHHHHTTS-C----CTTEEEECSCTTTCCGGG
T ss_pred HHHHHHHHhcCCCCcCEEEEEcCchHHHHHHHHHcCCCeEEEEECCHHHHHHHHhc-c----CCCeEEEEcchhhCChhH
Confidence 45678889999999999999999999999999988448999999999999999887 1 248999999999887 22
Q ss_pred --CCccEEEEcchh
Q 035870 695 --NKYDRIISCEMI 706 (842)
Q Consensus 695 --~~fD~i~s~~~~ 706 (842)
+.| .|+++...
T Consensus 93 ~~~~~-~vv~NlPy 105 (249)
T 3ftd_A 93 LGKEL-KVVGNLPY 105 (249)
T ss_dssp SCSSE-EEEEECCT
T ss_pred ccCCc-EEEEECch
Confidence 233 67776554
No 376
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.67 E-value=6.4e-08 Score=103.86 Aligned_cols=51 Identities=22% Similarity=0.280 Sum_probs=40.9
Q ss_pred HHHHHHHhhhcCceEEeCCCeeEEEeCCCcEEEEe---CCCcEEeCCEEEEccCh
Q 035870 218 VNKVRKQLESWGCQIRTSSEVCSVLPADKGCTIVC---GDGSREFYNSCVMALHA 269 (842)
Q Consensus 218 ~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v~V~~---~~G~~~~ad~VV~A~p~ 269 (842)
.+.+.+.+++.|+++++++ |++|..+++.+.+.+ .++.++.+|.||+|+..
T Consensus 87 ~~~~~~~~~~~gv~i~~~~-v~~i~~~~~~~~v~~~~~~~~~~~~~d~vvlAtG~ 140 (338)
T 3itj_A 87 MDRMREQSTKFGTEIITET-VSKVDLSSKPFKLWTEFNEDAEPVTTDAIILATGA 140 (338)
T ss_dssp HHHHHHHHHHTTCEEECSC-EEEEECSSSSEEEEETTCSSSCCEEEEEEEECCCE
T ss_pred HHHHHHHHHHcCCEEEEeE-EEEEEEcCCEEEEEEEecCCCcEEEeCEEEECcCC
Confidence 3344455555699999998 999999998999888 46778999999999765
No 377
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.66 E-value=1.6e-07 Score=107.18 Aligned_cols=55 Identities=16% Similarity=0.198 Sum_probs=48.2
Q ss_pred hHHHHHHHHHhhhcCceEEeCCCeeEEEeCCCc----EEEEeCCCc-EEeCCEEEEccCh
Q 035870 215 HSYVNKVRKQLESWGCQIRTSSEVCSVLPADKG----CTIVCGDGS-REFYNSCVMALHA 269 (842)
Q Consensus 215 ~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~----v~V~~~~G~-~~~ad~VV~A~p~ 269 (842)
..+.+.+.+.+++.|++|+++++|++|..++++ +.|++.+|+ ++.||.||+|+..
T Consensus 255 ~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~~v~~~~v~~~~G~~~i~aD~Vv~A~G~ 314 (523)
T 1mo9_A 255 NETRAYVLDRMKEQGMEIISGSNVTRIEEDANGRVQAVVAMTPNGEMRIETDFVFLGLGE 314 (523)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCEEEEEEECTTSBEEEEEEEETTEEEEEECSCEEECCCC
T ss_pred HHHHHHHHHHHHhCCcEEEECCEEEEEEEcCCCceEEEEEEECCCcEEEEcCEEEECcCC
Confidence 467888889999999999999999999987665 788888887 8999999999864
No 378
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=98.66 E-value=2.2e-07 Score=107.14 Aligned_cols=57 Identities=16% Similarity=0.192 Sum_probs=46.2
Q ss_pred hHHHHHHHHHhhhcCceEEeCCCeeEEEeCCCcE-EEEe---CCCc--EEeCCEEEEccChHH
Q 035870 215 HSYVNKVRKQLESWGCQIRTSSEVCSVLPADKGC-TIVC---GDGS--REFYNSCVMALHAPD 271 (842)
Q Consensus 215 ~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v-~V~~---~~G~--~~~ad~VV~A~p~~~ 271 (842)
..+...|.+.+.+.|++|+.+++|++|..+++++ .|.. .+|+ ++.|+.||+|+....
T Consensus 155 ~~l~~~L~~~~~~~gv~i~~~~~v~~Li~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~ 217 (621)
T 2h88_A 155 HSLLHTLYGRSLRYDTSYFVEYFALDLLMENGECRGVIALCIEDGTIHRFRAKNTVIATGGYG 217 (621)
T ss_dssp HHHHHHHHHHHTTSCCEEEETEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCCCCG
T ss_pred HHHHHHHHHHHHhCCCEEEEceEEEEEEEECCEEEEEEEEEcCCCcEEEEEcCeEEECCCccc
Confidence 4788999999988999999999999999876654 3333 4675 689999999997654
No 379
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=98.65 E-value=1.2e-07 Score=110.23 Aligned_cols=57 Identities=18% Similarity=0.243 Sum_probs=45.7
Q ss_pred hHHHHHHHHHhhhcCceEEeCCCeeEEEeCCCcE-EEEe---CCCc--EEeCCEEEEccChHH
Q 035870 215 HSYVNKVRKQLESWGCQIRTSSEVCSVLPADKGC-TIVC---GDGS--REFYNSCVMALHAPD 271 (842)
Q Consensus 215 ~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v-~V~~---~~G~--~~~ad~VV~A~p~~~ 271 (842)
..+...|.+.+.+.|++|+.+++|++|..+++++ .|.. .+|+ .+.|+.||+|+..+.
T Consensus 158 ~~l~~~L~~~a~~~gv~i~~~~~v~~L~~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~ 220 (660)
T 2bs2_A 158 HTMLFAVANECLKLGVSIQDRKEAIALIHQDGKCYGAVVRDLVTGDIIAYVAKGTLIATGGYG 220 (660)
T ss_dssp HHHHHHHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEECCCCCG
T ss_pred HHHHHHHHHHHHhCCCEEEECcEEEEEEecCCEEEEEEEEECCCCcEEEEEcCEEEEccCcch
Confidence 4788999999988899999999999998876653 2322 5675 489999999997653
No 380
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=98.65 E-value=1.2e-07 Score=108.91 Aligned_cols=60 Identities=28% Similarity=0.382 Sum_probs=47.2
Q ss_pred cEEEECCChHHHHHHHHHHhCCCeEEEEecCCCCCCCceeEeeCCeeeecceEeecCCCchhHHHHHHHcCCCccc
Q 035870 2 RVAVIGAGISGLVSAYVLAKAGVEVVLYEKDDYLGGHAKTVTFDGVDLDLGFMVFNRVTYPNMMEFFESLGVDMEM 77 (842)
Q Consensus 2 dV~IIGaGiaGLsaA~~L~~~G~~V~VlEa~~~~GG~~~s~~~~g~~~d~G~~~~~~~~~~~~~~l~~~lGl~~~~ 77 (842)
||+|||||++||++|+.|++.|++|+|+|+.+.++...+. .. ..++..++++++|+....
T Consensus 28 dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~~~~~~~~~------------~~----l~~~~~~~l~~lGl~~~~ 87 (549)
T 2r0c_A 28 DVLILGGGPVGMALALDLAHRQVGHLVVEQTDGTITHPRV------------GT----IGPRSMELFRRWGVAKQI 87 (549)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSCCSSCCC------------CE----ECHHHHHHHHHTTCHHHH
T ss_pred CEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCce------------ee----eCHHHHHHHHHcCChHHH
Confidence 7999999999999999999999999999998876542211 11 235677888998876543
No 381
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.65 E-value=3.8e-08 Score=111.33 Aligned_cols=119 Identities=17% Similarity=0.071 Sum_probs=92.3
Q ss_pred HHHHHHHHHcCCCCCCeEEEeccCchHHHHHHHHhc----------------CCEEEEEcCCHHHHHHHHHHHHHcCCCC
Q 035870 616 RKVSLLIEKARVSKGQEVLEIGCGWGTLAIEIVKRT----------------GCKYTGITLSEEQLKYAEMKVKEAGLQD 679 (842)
Q Consensus 616 ~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~la~~~----------------~~~v~gid~s~~~~~~a~~~~~~~~l~~ 679 (842)
..++.|++.+...++ +|||.+||+|++...+++.. ..+++|+|+++.+++.|+.++...|+..
T Consensus 232 ~Vv~lmv~ll~p~~~-~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~ 310 (544)
T 3khk_A 232 SIVTLIVEMLEPYKG-RVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRGIDF 310 (544)
T ss_dssp HHHHHHHHHHCCCSE-EEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHhcCCC-eEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhCCCc
Confidence 445677777777666 99999999999998876531 4689999999999999999999888876
Q ss_pred CeEEEEccccCCc--cCCCccEEEEcchhhh-------------------------cChh--hHHHHHHHHHhccccCcE
Q 035870 680 LIRLYLCDYRQLA--KANKYDRIISCEMIEA-------------------------VGHE--FMEEFFGCCESLLAEDGL 730 (842)
Q Consensus 680 ~v~~~~~d~~~~~--~~~~fD~i~s~~~~~~-------------------------~~~~--~~~~~~~~~~~~LkpgG~ 730 (842)
++.+.++|....+ ...+||+|++|..+.. ++.. .--.+++.+.+.|||||+
T Consensus 311 ~i~i~~gDtL~~~~~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr 390 (544)
T 3khk_A 311 NFGKKNADSFLDDQHPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHMLYHLAPTGS 390 (544)
T ss_dssp BCCSSSCCTTTSCSCTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHHHHTEEEEEE
T ss_pred ccceeccchhcCcccccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHHHHHhccCce
Confidence 6666888865544 4578999999977653 1110 012589999999999999
Q ss_pred EEEEe
Q 035870 731 LVLQF 735 (842)
Q Consensus 731 ~~~~~ 735 (842)
+.+..
T Consensus 391 ~aiVl 395 (544)
T 3khk_A 391 MALLL 395 (544)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 88754
No 382
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.65 E-value=1.3e-07 Score=105.65 Aligned_cols=55 Identities=18% Similarity=0.202 Sum_probs=47.7
Q ss_pred hHHHHHHHHHhhhcCceEEeCCCeeEEEeCCCc-EEEEeCCCcEEeCCEEEEccCh
Q 035870 215 HSYVNKVRKQLESWGCQIRTSSEVCSVLPADKG-CTIVCGDGSREFYNSCVMALHA 269 (842)
Q Consensus 215 ~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~-v~V~~~~G~~~~ad~VV~A~p~ 269 (842)
..+.+.+.+.+++.|++++++++|++|+.++++ +.|++.+|+++.+|.||+|+..
T Consensus 208 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~i~~D~vv~a~G~ 263 (450)
T 1ges_A 208 PMISETLVEVMNAEGPQLHTNAIPKAVVKNTDGSLTLELEDGRSETVDCLIWAIGR 263 (450)
T ss_dssp HHHHHHHHHHHHHHSCEEECSCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCcEEEEEECCCcEEEcCEEEECCCC
Confidence 357778888888889999999999999987655 7888999988999999999864
No 383
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=98.63 E-value=3.1e-07 Score=105.45 Aligned_cols=55 Identities=15% Similarity=0.023 Sum_probs=47.5
Q ss_pred hHHHHHHHHHhhhc-CceEEeCCCeeEEEeCCCc--EEEEeCCCcEEeCCEEEEccChH
Q 035870 215 HSYVNKVRKQLESW-GCQIRTSSEVCSVLPADKG--CTIVCGDGSREFYNSCVMALHAP 270 (842)
Q Consensus 215 ~~l~~~L~~~l~~~-G~~i~~~~~V~~I~~~~~~--v~V~~~~G~~~~ad~VV~A~p~~ 270 (842)
..+.+.|.+.+++. |++|+++ +|++|..++++ +.|++.+|+++.||.||.|+...
T Consensus 194 ~~l~~~L~~~~~~~~Gv~i~~~-~V~~i~~~~~g~~~~v~~~~G~~i~ad~vI~A~G~~ 251 (550)
T 2e4g_A 194 HLVADFLRRFATEKLGVRHVED-RVEHVQRDANGNIESVRTATGRVFDADLFVDCSGFR 251 (550)
T ss_dssp HHHHHHHHHHHHHHSCCEEEEC-CEEEEEECTTSCEEEEEETTSCEEECSEEEECCGGG
T ss_pred HHHHHHHHHHHHhcCCcEEEEC-eEeEEEEcCCCCEEEEEECCCCEEECCEEEECCCCc
Confidence 36888888888888 9999999 99999987655 67888899889999999998765
No 384
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=98.63 E-value=5.2e-07 Score=102.84 Aligned_cols=55 Identities=9% Similarity=-0.019 Sum_probs=47.6
Q ss_pred hHHHHHHHHHhhhcCceEEeCCCeeEEEeCCCc--EEEEeCCCcEEeCCEEEEccChH
Q 035870 215 HSYVNKVRKQLESWGCQIRTSSEVCSVLPADKG--CTIVCGDGSREFYNSCVMALHAP 270 (842)
Q Consensus 215 ~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~--v~V~~~~G~~~~ad~VV~A~p~~ 270 (842)
..+.+.|.+.+++.|++++.+ +|++|..++++ +.|++.+|+++.||.||.|....
T Consensus 173 ~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~ 229 (511)
T 2weu_A 173 DEVARYLSEYAIARGVRHVVD-DVQHVGQDERGWISGVHTKQHGEISGDLFVDCTGFR 229 (511)
T ss_dssp HHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECCGGG
T ss_pred HHHHHHHHHHHHHCCCEEEEC-eEeEEEEcCCCCEEEEEECCCCEEEcCEEEECCCcc
Confidence 468888888888889999999 99999986655 67888899889999999998765
No 385
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.63 E-value=1.7e-07 Score=104.99 Aligned_cols=57 Identities=19% Similarity=0.254 Sum_probs=50.0
Q ss_pred hhHHHHHHHHHhhhcCceEEeCCCeeEEEeCCCcEEEEeCCCcEEeCCEEEEccChH
Q 035870 214 SHSYVNKVRKQLESWGCQIRTSSEVCSVLPADKGCTIVCGDGSREFYNSCVMALHAP 270 (842)
Q Consensus 214 ~~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VV~A~p~~ 270 (842)
...+.+.+.+.+++.|++|+++++|++|+.+++++.|++.+|+++.+|.||+|+...
T Consensus 207 ~~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~~D~vv~A~G~~ 263 (455)
T 2yqu_A 207 DLEVSRAAERVFKKQGLTIRTGVRVTAVVPEAKGARVELEGGEVLEADRVLVAVGRR 263 (455)
T ss_dssp CHHHHHHHHHHHHHHTCEEECSCCEEEEEEETTEEEEEETTSCEEEESEEEECSCEE
T ss_pred CHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCEEEEEECCCeEEEcCEEEECcCCC
Confidence 456788888888888999999999999998888888888888899999999998743
No 386
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=98.62 E-value=4.5e-07 Score=103.56 Aligned_cols=55 Identities=7% Similarity=0.091 Sum_probs=45.8
Q ss_pred hHHHHHHHHHhhh-cCceEEeCCCeeEEEeCCCc--EEEEeCCCcEEeCCEEEEccChH
Q 035870 215 HSYVNKVRKQLES-WGCQIRTSSEVCSVLPADKG--CTIVCGDGSREFYNSCVMALHAP 270 (842)
Q Consensus 215 ~~l~~~L~~~l~~-~G~~i~~~~~V~~I~~~~~~--v~V~~~~G~~~~ad~VV~A~p~~ 270 (842)
..+.+.|.+.+++ .|++++.+ +|++|..++++ +.|++.+|+++.||.||.|....
T Consensus 175 ~~l~~~L~~~a~~~~Gv~i~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~AdG~~ 232 (526)
T 2pyx_A 175 AKFSQLLTEHCTQKLGVTHIRD-HVSQIINNQHGDIEKLITKQNGEISGQLFIDCTGAK 232 (526)
T ss_dssp HHHHHHHHHHHHHTSCCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECSGGG
T ss_pred HHHHHHHHHHHHhcCCCEEEEe-EEEEEEecCCCcEEEEEECCCCEEEcCEEEECCCcc
Confidence 3677888888887 79999999 69999987655 47888887789999999998765
No 387
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=98.62 E-value=1.4e-07 Score=99.30 Aligned_cols=39 Identities=33% Similarity=0.581 Sum_probs=35.7
Q ss_pred CcEEEECCChHHHHHHHHHHhC--CCeEEEEecCCCCCCCc
Q 035870 1 MRVAVIGAGISGLVSAYVLAKA--GVEVVLYEKDDYLGGHA 39 (842)
Q Consensus 1 kdV~IIGaGiaGLsaA~~L~~~--G~~V~VlEa~~~~GG~~ 39 (842)
.||+|||||++||+||++|+++ |++|+|+|+...+||.+
T Consensus 80 ~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~GGg~ 120 (344)
T 3jsk_A 80 TDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPGGGA 120 (344)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCCTTT
T ss_pred CCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccCCcc
Confidence 3899999999999999999997 99999999998888744
No 388
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=98.60 E-value=2.7e-07 Score=106.35 Aligned_cols=55 Identities=16% Similarity=0.196 Sum_probs=44.8
Q ss_pred HHHHHHHHHhhhcCceEEeCCCeeEEEeCCC-cE-EEEeC------CC---------cEEeCCEEEEccChH
Q 035870 216 SYVNKVRKQLESWGCQIRTSSEVCSVLPADK-GC-TIVCG------DG---------SREFYNSCVMALHAP 270 (842)
Q Consensus 216 ~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~-~v-~V~~~------~G---------~~~~ad~VV~A~p~~ 270 (842)
.+.+.|.+.+++.|++|+++++|++|..+++ .+ .|++. +| .++.||.||.|....
T Consensus 145 ~l~~~L~~~a~~~Gv~i~~g~~v~~l~~~~~g~V~gV~~~~~g~~~~G~~~~~~~~g~~i~Ad~VV~AdG~~ 216 (584)
T 2gmh_A 145 HLVSWMGEQAEALGVEVYPGYAAAEILFHEDGSVKGIATNDVGIQKDGAPKTTFERGLELHAKVTIFAEGCH 216 (584)
T ss_dssp HHHHHHHHHHHHTTCEEETTCCEEEEEECTTSSEEEEEECCEEECTTSCEEEEEECCCEEECSEEEECCCTT
T ss_pred HHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCCCEEEEEeCCccccCCCCcccccCCceEEECCEEEEeeCCC
Confidence 6777788888888999999999999998875 45 47775 33 579999999998754
No 389
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=98.60 E-value=1.5e-07 Score=99.73 Aligned_cols=48 Identities=21% Similarity=0.180 Sum_probs=39.6
Q ss_pred HHHHhhhcCceEEeCCCeeEEEeCCCcEEEEeCCCcEEeCCEEEEccCh
Q 035870 221 VRKQLESWGCQIRTSSEVCSVLPADKGCTIVCGDGSREFYNSCVMALHA 269 (842)
Q Consensus 221 L~~~l~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VV~A~p~ 269 (842)
+.+.+++.|++++. ++|++|..+++++.|++.+|+++.+|.||+|+..
T Consensus 65 l~~~~~~~~v~~~~-~~v~~i~~~~~~~~v~~~~g~~~~~~~vv~AtG~ 112 (311)
T 2q0l_A 65 WQEQCFRFGLKHEM-TAVQRVSKKDSHFVILAEDGKTFEAKSVIIATGG 112 (311)
T ss_dssp HHHHHHTTSCEEEC-SCEEEEEEETTEEEEEETTSCEEEEEEEEECCCE
T ss_pred HHHHHHHcCCEEEE-EEEEEEEEcCCEEEEEEcCCCEEECCEEEECCCC
Confidence 34444555889988 7999999988888898888889999999999874
No 390
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=98.60 E-value=1.3e-07 Score=105.99 Aligned_cols=40 Identities=35% Similarity=0.614 Sum_probs=37.2
Q ss_pred CcEEEECCChHHHHHHHHHHh---CCCe---EEEEecCCCCCCCce
Q 035870 1 MRVAVIGAGISGLVSAYVLAK---AGVE---VVLYEKDDYLGGHAK 40 (842)
Q Consensus 1 kdV~IIGaGiaGLsaA~~L~~---~G~~---V~VlEa~~~~GG~~~ 40 (842)
|||+|||||++||+||..|++ .|++ |+|+|+++.+||.+.
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~GG~w~ 48 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGGQWN 48 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSCGGGS
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCCEee
Confidence 589999999999999999999 9999 999999999998654
No 391
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=98.58 E-value=3.9e-07 Score=87.96 Aligned_cols=52 Identities=13% Similarity=0.226 Sum_probs=43.6
Q ss_pred HHHHHHHHhhhcCceEEeCCCeeEEEeCCCcEEEEeCCCcEEeCCEEEEccChH
Q 035870 217 YVNKVRKQLESWGCQIRTSSEVCSVLPADKGCTIVCGDGSREFYNSCVMALHAP 270 (842)
Q Consensus 217 l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VV~A~p~~ 270 (842)
+.+.+.+.+++.|++++++ +|++|+.+++++.|++.+| ++.||.||+|+...
T Consensus 58 ~~~~l~~~~~~~gv~v~~~-~v~~i~~~~~~~~v~~~~g-~i~ad~vI~A~G~~ 109 (180)
T 2ywl_A 58 LLRRLEAHARRYGAEVRPG-VVKGVRDMGGVFEVETEEG-VEKAERLLLCTHKD 109 (180)
T ss_dssp HHHHHHHHHHHTTCEEEEC-CCCEEEECSSSEEEECSSC-EEEEEEEEECCTTC
T ss_pred HHHHHHHHHHHcCCEEEeC-EEEEEEEcCCEEEEEECCC-EEEECEEEECCCCC
Confidence 4445566667779999999 9999999888899999888 89999999998754
No 392
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.57 E-value=1.7e-07 Score=105.46 Aligned_cols=55 Identities=11% Similarity=0.119 Sum_probs=45.1
Q ss_pred hHHHHHHHHHh-hhcCceEEeCCCeeEEEeCCCcEEEEeC--CC--cEEeCCEEEEccCh
Q 035870 215 HSYVNKVRKQL-ESWGCQIRTSSEVCSVLPADKGCTIVCG--DG--SREFYNSCVMALHA 269 (842)
Q Consensus 215 ~~l~~~L~~~l-~~~G~~i~~~~~V~~I~~~~~~v~V~~~--~G--~~~~ad~VV~A~p~ 269 (842)
..+.+.+.+.+ +++|++|+++++|++|+.+++++.|++. +| +++.||.||+|++.
T Consensus 215 ~~~~~~l~~~l~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~i~~D~vv~a~G~ 274 (468)
T 2qae_A 215 EDVTNALVGALAKNEKMKFMTSTKVVGGTNNGDSVSLEVEGKNGKRETVTCEALLVSVGR 274 (468)
T ss_dssp HHHHHHHHHHHHHHTCCEEECSCEEEEEEECSSSEEEEEECC---EEEEEESEEEECSCE
T ss_pred HHHHHHHHHHHhhcCCcEEEeCCEEEEEEEcCCeEEEEEEcCCCceEEEECCEEEECCCc
Confidence 45777888888 8889999999999999988777777765 66 57999999999864
No 393
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.57 E-value=8.6e-08 Score=111.26 Aligned_cols=54 Identities=9% Similarity=0.087 Sum_probs=46.1
Q ss_pred hhHHHHHHHHHhhhcCceEEeCCCeeEEEeCCCcEEEEeCCCcEEeCCEEEEccCh
Q 035870 214 SHSYVNKVRKQLESWGCQIRTSSEVCSVLPADKGCTIVCGDGSREFYNSCVMALHA 269 (842)
Q Consensus 214 ~~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VV~A~p~ 269 (842)
...+.+.+.+.+++.|++|+++++|++|..+++ .|++.+|+++.||.||+|++.
T Consensus 227 ~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~--~v~~~~g~~i~~D~Vi~a~G~ 280 (588)
T 3ics_A 227 DYEMAAYVHEHMKNHDVELVFEDGVDALEENGA--VVRLKSGSVIQTDMLILAIGV 280 (588)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSCCEEEEEGGGT--EEEETTSCEEECSEEEECSCE
T ss_pred CHHHHHHHHHHHHHcCCEEEECCeEEEEecCCC--EEEECCCCEEEcCEEEEccCC
Confidence 356788888899999999999999999987655 466788889999999999874
No 394
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=98.57 E-value=2.8e-07 Score=96.60 Aligned_cols=38 Identities=42% Similarity=0.660 Sum_probs=35.6
Q ss_pred cEEEECCChHHHHHHHHHHhC--CCeEEEEecCCCCCCCc
Q 035870 2 RVAVIGAGISGLVSAYVLAKA--GVEVVLYEKDDYLGGHA 39 (842)
Q Consensus 2 dV~IIGaGiaGLsaA~~L~~~--G~~V~VlEa~~~~GG~~ 39 (842)
||+|||||++||+||+.|++. |++|+|+|+++.+||.+
T Consensus 67 dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ggg~ 106 (326)
T 2gjc_A 67 DVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGS 106 (326)
T ss_dssp SEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTT
T ss_pred CEEEECccHHHHHHHHHHHhcCCCCeEEEEecCccccccc
Confidence 899999999999999999998 99999999999998743
No 395
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.56 E-value=3.4e-08 Score=100.39 Aligned_cols=85 Identities=18% Similarity=0.134 Sum_probs=69.1
Q ss_pred HHHHHHHHHcCCCCCCeEEEeccCchHHHHHHHHhcCCE--EEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCc-
Q 035870 616 RKVSLLIEKARVSKGQEVLEIGCGWGTLAIEIVKRTGCK--YTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLA- 692 (842)
Q Consensus 616 ~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~--v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~- 692 (842)
..++.+++.+.+.++++|||||||+|.++. ++ + +.+ |+++|+|+++++.+++++... ++++++++|+.+++
T Consensus 8 ~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~-l~-~-~~~~~v~avEid~~~~~~a~~~~~~~---~~v~~i~~D~~~~~~ 81 (252)
T 1qyr_A 8 FVIDSIVSAINPQKGQAMVEIGPGLAALTE-PV-G-ERLDQLTVIELDRDLAARLQTHPFLG---PKLTIYQQDAMTFNF 81 (252)
T ss_dssp HHHHHHHHHHCCCTTCCEEEECCTTTTTHH-HH-H-TTCSCEEEECCCHHHHHHHHTCTTTG---GGEEEECSCGGGCCH
T ss_pred HHHHHHHHhcCCCCcCEEEEECCCCcHHHH-hh-h-CCCCeEEEEECCHHHHHHHHHHhccC---CceEEEECchhhCCH
Confidence 455788888889999999999999999999 65 4 467 999999999999999887542 37999999999876
Q ss_pred cC-----CCccEEEEcchh
Q 035870 693 KA-----NKYDRIISCEMI 706 (842)
Q Consensus 693 ~~-----~~fD~i~s~~~~ 706 (842)
++ +..|.|+++...
T Consensus 82 ~~~~~~~~~~~~vvsNlPY 100 (252)
T 1qyr_A 82 GELAEKMGQPLRVFGNLPY 100 (252)
T ss_dssp HHHHHHHTSCEEEEEECCT
T ss_pred HHhhcccCCceEEEECCCC
Confidence 21 245788888653
No 396
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=98.56 E-value=1.7e-07 Score=99.03 Aligned_cols=35 Identities=34% Similarity=0.560 Sum_probs=32.2
Q ss_pred cEEEECCChHHHHHHHHHHhCCCeEEEEecCCCCCC
Q 035870 2 RVAVIGAGISGLVSAYVLAKAGVEVVLYEKDDYLGG 37 (842)
Q Consensus 2 dV~IIGaGiaGLsaA~~L~~~G~~V~VlEa~~~~GG 37 (842)
||+|||||+|||+||++|++.|++|+|+|+. ..||
T Consensus 8 DVvIIGaGpAGlsAA~~lar~g~~v~lie~~-~~gg 42 (304)
T 4fk1_A 8 DCAVIGAGPAGLNASLVLGRARKQIALFDNN-TNRN 42 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEECS-CCGG
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCC-CCCC
Confidence 8999999999999999999999999999985 4555
No 397
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=98.54 E-value=3.6e-07 Score=92.17 Aligned_cols=54 Identities=11% Similarity=0.124 Sum_probs=44.1
Q ss_pred HHHHHHHHHhhhc-CceEEeCCCeeEEEeCCCcE-EEEeCCCcEEeCCEEEEccChH
Q 035870 216 SYVNKVRKQLESW-GCQIRTSSEVCSVLPADKGC-TIVCGDGSREFYNSCVMALHAP 270 (842)
Q Consensus 216 ~l~~~L~~~l~~~-G~~i~~~~~V~~I~~~~~~v-~V~~~~G~~~~ad~VV~A~p~~ 270 (842)
.+.+.|.+.+++. |++++ +++|++|..+++++ .|.+.+|+++.||.||+|+...
T Consensus 69 ~~~~~l~~~~~~~~gv~i~-~~~v~~i~~~~~~v~~v~~~~g~~i~a~~VV~A~G~~ 124 (232)
T 2cul_A 69 AFHARAKYLLEGLRPLHLF-QATATGLLLEGNRVVGVRTWEGPPARGEKVVLAVGSF 124 (232)
T ss_dssp HHHHHHHHHHHTCTTEEEE-ECCEEEEEEETTEEEEEEETTSCCEECSEEEECCTTC
T ss_pred HHHHHHHHHHHcCCCcEEE-EeEEEEEEEeCCEEEEEEECCCCEEECCEEEECCCCC
Confidence 4555677777776 88998 67999999887775 6888889889999999998764
No 398
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=98.54 E-value=1.6e-07 Score=100.68 Aligned_cols=51 Identities=27% Similarity=0.334 Sum_probs=40.8
Q ss_pred HHHHHHHhhhcCceEEeCCCeeEEEeCCCcEEEEeCCCcEEeCCEEEEccChH
Q 035870 218 VNKVRKQLESWGCQIRTSSEVCSVLPADKGCTIVCGDGSREFYNSCVMALHAP 270 (842)
Q Consensus 218 ~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VV~A~p~~ 270 (842)
.+.+.+.+++.|++++.++ |+.|+.+++++.|++ +|+++.+|.||+|+...
T Consensus 73 ~~~l~~~~~~~gv~~~~~~-v~~i~~~~~~~~v~~-~~~~~~~~~vv~A~G~~ 123 (333)
T 1vdc_A 73 TDKFRKQSERFGTTIFTET-VTKVDFSSKPFKLFT-DSKAILADAVILAIGAV 123 (333)
T ss_dssp HHHHHHHHHHTTCEEECCC-CCEEECSSSSEEEEC-SSEEEEEEEEEECCCEE
T ss_pred HHHHHHHHHHCCCEEEEeE-EEEEEEcCCEEEEEE-CCcEEEcCEEEECCCCC
Confidence 3344455555689999987 999999888888888 77789999999998754
No 399
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=98.54 E-value=1.8e-07 Score=98.19 Aligned_cols=49 Identities=16% Similarity=0.207 Sum_probs=38.2
Q ss_pred HHHHHhhhc-CceEEeCCCeeEEEeCCCcEEEEeCCCcEEeCCEEEEccCh
Q 035870 220 KVRKQLESW-GCQIRTSSEVCSVLPADKGCTIVCGDGSREFYNSCVMALHA 269 (842)
Q Consensus 220 ~L~~~l~~~-G~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VV~A~p~ 269 (842)
.+.+.+++. ++++. +++|+.|..+++++.|++.+|+++.+|.||+|+..
T Consensus 61 ~~~~~~~~~~~v~~~-~~~v~~i~~~~~~~~v~~~~g~~~~~d~vviAtG~ 110 (297)
T 3fbs_A 61 EARRQIERYPTIHWV-EGRVTDAKGSFGEFIVEIDGGRRETAGRLILAMGV 110 (297)
T ss_dssp HHHHHHTTCTTEEEE-ESCEEEEEEETTEEEEEETTSCEEEEEEEEECCCC
T ss_pred HHHHHHHhcCCeEEE-EeEEEEEEEcCCeEEEEECCCCEEEcCEEEECCCC
Confidence 344444444 45554 56999999998889999999988999999999875
No 400
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=98.54 E-value=2.3e-07 Score=98.96 Aligned_cols=37 Identities=32% Similarity=0.565 Sum_probs=34.3
Q ss_pred cEEEECCChHHHHHHHHHHhCCCeEEEEecCCCCCCCc
Q 035870 2 RVAVIGAGISGLVSAYVLAKAGVEVVLYEKDDYLGGHA 39 (842)
Q Consensus 2 dV~IIGaGiaGLsaA~~L~~~G~~V~VlEa~~~~GG~~ 39 (842)
||+|||||++||+||+.|++.|++|+|+|++ .+||.+
T Consensus 10 dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~ 46 (325)
T 2q7v_A 10 DVVIIGGGPAGLTAAIYTGRAQLSTLILEKG-MPGGQI 46 (325)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTGGG
T ss_pred CEEEECCCHHHHHHHHHHHHcCCcEEEEeCC-CCCccc
Confidence 7999999999999999999999999999997 678744
No 401
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.54 E-value=2e-07 Score=102.01 Aligned_cols=56 Identities=20% Similarity=0.181 Sum_probs=49.8
Q ss_pred hHHHHHHHHHhhhcCceEEeCCCeeEEEeCCCcEEEEeCCCcEEeCCEEEEccChH
Q 035870 215 HSYVNKVRKQLESWGCQIRTSSEVCSVLPADKGCTIVCGDGSREFYNSCVMALHAP 270 (842)
Q Consensus 215 ~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VV~A~p~~ 270 (842)
..+.+.+.+.+++.|++|+++++|++|..+++++.|++.+|+++.||.||+|++..
T Consensus 187 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~d~vv~a~G~~ 242 (384)
T 2v3a_A 187 PAAAKAVQAGLEGLGVRFHLGPVLASLKKAGEGLEAHLSDGEVIPCDLVVSAVGLR 242 (384)
T ss_dssp HHHHHHHHHHHHTTTCEEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHHHcCCEEEeCCEEEEEEecCCEEEEEECCCCEEECCEEEECcCCC
Confidence 46778888899889999999999999998888888999999899999999998643
No 402
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.53 E-value=3.1e-07 Score=103.81 Aligned_cols=55 Identities=20% Similarity=0.335 Sum_probs=48.2
Q ss_pred hHHHHHHHHHhhhcCceEEeCCCeeEEEeCCCc-EEEEeCCCcEEeCCEEEEccCh
Q 035870 215 HSYVNKVRKQLESWGCQIRTSSEVCSVLPADKG-CTIVCGDGSREFYNSCVMALHA 269 (842)
Q Consensus 215 ~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~-v~V~~~~G~~~~ad~VV~A~p~ 269 (842)
..+.+.+.+.++++|++|+++++|++|+.++++ +.|++.+|+++.||.||+|+..
T Consensus 231 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~ 286 (490)
T 1fec_A 231 SELRKQLTEQLRANGINVRTHENPAKVTKNADGTRHVVFESGAEADYDVVMLAIGR 286 (490)
T ss_dssp HHHHHHHHHHHHHTTEEEEETCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCE
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCEEEEEECCCcEEEcCEEEEccCC
Confidence 467788888899999999999999999987654 7888999988999999999864
No 403
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.53 E-value=2e-07 Score=104.57 Aligned_cols=55 Identities=18% Similarity=0.273 Sum_probs=48.4
Q ss_pred hHHHHHHHHHhhhcCceEEeCCCeeEEEeCCCcEEEEeCCCc-EEeCCEEEEccCh
Q 035870 215 HSYVNKVRKQLESWGCQIRTSSEVCSVLPADKGCTIVCGDGS-REFYNSCVMALHA 269 (842)
Q Consensus 215 ~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~-~~~ad~VV~A~p~ 269 (842)
..+.+.+.+.+++.|++++++++|++|+.+++++.|++.+|+ ++.+|.||+|+..
T Consensus 207 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~G~~~i~~D~vv~a~G~ 262 (463)
T 2r9z_A 207 PLLSATLAENMHAQGIETHLEFAVAALERDAQGTTLVAQDGTRLEGFDSVIWAVGR 262 (463)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCCEEEEEEETTEEEEEETTCCEEEEESEEEECSCE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCeEEEEEeCCcEEEEcCEEEECCCC
Confidence 356777888888899999999999999987777889999998 8999999999864
No 404
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=98.53 E-value=3.6e-07 Score=100.91 Aligned_cols=51 Identities=10% Similarity=0.037 Sum_probs=43.7
Q ss_pred hHHHHHHHHHhhhcCceEEeCCCeeEEEeCCCcEEEEeCCCcEEeCCEEEEccCh
Q 035870 215 HSYVNKVRKQLESWGCQIRTSSEVCSVLPADKGCTIVCGDGSREFYNSCVMALHA 269 (842)
Q Consensus 215 ~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VV~A~p~ 269 (842)
..+.+.+.+.+++.|++++++++|++|+.+ + |++++|+++.||.||++++.
T Consensus 218 ~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~--~--v~~~~g~~~~~D~vi~a~G~ 268 (409)
T 3h8l_A 218 PNSRKAVASIYNQLGIKLVHNFKIKEIREH--E--IVDEKGNTIPADITILLPPY 268 (409)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEECSS--E--EEETTSCEEECSEEEEECCE
T ss_pred HHHHHHHHHHHHHCCCEEEcCCceEEECCC--e--EEECCCCEEeeeEEEECCCC
Confidence 567888888898999999999999999643 2 77789999999999999864
No 405
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=98.51 E-value=1.5e-06 Score=92.72 Aligned_cols=155 Identities=17% Similarity=0.164 Sum_probs=102.5
Q ss_pred CCeEEEeccCchHHHHHHHHh------------------cCCEEEEEcCC-----------HHHHHHHHHHHHHcCCCCC
Q 035870 630 GQEVLEIGCGWGTLAIEIVKR------------------TGCKYTGITLS-----------EEQLKYAEMKVKEAGLQDL 680 (842)
Q Consensus 630 ~~~vLDiGcG~G~~~~~la~~------------------~~~~v~gid~s-----------~~~~~~a~~~~~~~~l~~~ 680 (842)
..+|+|+||++|..+..+... +..+|...|+. +.+.+.+++ ..|-..+
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~---~~g~~~~ 129 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEK---ENGRKIG 129 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHH---HTCCCTT
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhh---hccCCCC
Confidence 578999999999999887755 33578889987 544444322 2232113
Q ss_pred eEEEEccccC----CccCCCccEEEEcchhhhcChh-------------------------------------hHHHHHH
Q 035870 681 IRLYLCDYRQ----LAKANKYDRIISCEMIEAVGHE-------------------------------------FMEEFFG 719 (842)
Q Consensus 681 v~~~~~d~~~----~~~~~~fD~i~s~~~~~~~~~~-------------------------------------~~~~~~~ 719 (842)
..|+.+.-.. +-+++++|+|+|+.++|++.+. ++..+|+
T Consensus 130 ~~f~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~FL~ 209 (384)
T 2efj_A 130 SCLIGAMPGSFYSRLFPEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTFLR 209 (384)
T ss_dssp SEEEEECCSCTTSCCSCTTCEEEEEEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEecchhhhhccCCCCceEEEEecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 3566665332 2378999999999999997531 1223477
Q ss_pred HHHhccccCcEEEEEeecCCCc--ccc---cccC-----------ccchhhhcccCCCCCCCHHHHHHHHhhcCCcEEEE
Q 035870 720 CCESLLAEDGLLVLQFISIPDE--RYN---EYRL-----------SSDFIKEYIFPGGCLPSLSRITSAMSVASRLCVEQ 783 (842)
Q Consensus 720 ~~~~~LkpgG~~~~~~~~~~~~--~~~---~~~~-----------~~~~~~~~i~p~~~~~~~~~~~~~~~~~~gf~v~~ 783 (842)
..++.|+|||++++.....++. ... .... ..+-+..+-.| -+.|+.+|+...+++..+|++..
T Consensus 210 ~Ra~eL~pGG~mvl~~~gr~~~~~~~~~~~~l~~al~~lv~eGli~~ek~dsf~~P-~y~ps~~E~~~~le~~g~F~i~~ 288 (384)
T 2efj_A 210 IHSEELISRGRMLLTFICKEDEFDHPNSMDLLEMSINDLVIEGHLEEEKLDSFNVP-IYAPSTEEVKRIVEEEGSFEILY 288 (384)
T ss_dssp HHHHHEEEEEEEEEEEECCCTTTCCCCHHHHHHHHHHHHHHHTSSCHHHHHTCCCS-BCCCCHHHHHHHHHHHCSEEEEE
T ss_pred HHHHHhccCCeEEEEEecCCCcccCcccHHHHHHHHHHHHHhCCcchhhhcccCCc-ccCCCHHHHHHHHHHcCCceEEE
Confidence 7799999999999998887664 100 0000 00112223334 36789999999998855799988
Q ss_pred EEecC
Q 035870 784 VENIG 788 (842)
Q Consensus 784 ~~~~~ 788 (842)
++.+.
T Consensus 289 le~~~ 293 (384)
T 2efj_A 289 LETFN 293 (384)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 87653
No 406
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.51 E-value=3.4e-07 Score=103.21 Aligned_cols=120 Identities=16% Similarity=0.159 Sum_probs=92.1
Q ss_pred HHHHHHHHcC----CCCCCeEEEeccCchHHHHHHHHhc----CCEEEEEcCCHHHHHHHHHHHHHcCCC-CCeEEEEcc
Q 035870 617 KVSLLIEKAR----VSKGQEVLEIGCGWGTLAIEIVKRT----GCKYTGITLSEEQLKYAEMKVKEAGLQ-DLIRLYLCD 687 (842)
Q Consensus 617 ~~~~l~~~l~----~~~~~~vLDiGcG~G~~~~~la~~~----~~~v~gid~s~~~~~~a~~~~~~~~l~-~~v~~~~~d 687 (842)
..+.|++.+. ..++.+|||.+||+|++...+++.. ..+++|+|+++.+++.|+.++...|+. +++.+.++|
T Consensus 205 Vv~lmv~ll~~~~~~~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~~~~I~~gD 284 (542)
T 3lkd_A 205 VAKLMTQIAFLGREDKQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVPIENQFLHNAD 284 (542)
T ss_dssp HHHHHHHHHHTTCTTCTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESC
T ss_pred HHHHHHHHHhcccCCCCCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCCcCccceEecc
Confidence 3445555554 4578899999999999999888762 578999999999999999999888875 468999999
Q ss_pred ccCC--c--cCCCccEEEEcchhhhcC-------------------h-h-hHHHHHHHHHhccc-cCcEEEEEee
Q 035870 688 YRQL--A--KANKYDRIISCEMIEAVG-------------------H-E-FMEEFFGCCESLLA-EDGLLVLQFI 736 (842)
Q Consensus 688 ~~~~--~--~~~~fD~i~s~~~~~~~~-------------------~-~-~~~~~~~~~~~~Lk-pgG~~~~~~~ 736 (842)
.... + ...+||+|++|..+..-. . . .--.+++.+.+.|| |||++.+...
T Consensus 285 tL~~d~p~~~~~~fD~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~a~VlP 359 (542)
T 3lkd_A 285 TLDEDWPTQEPTNFDGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGVMAIVLP 359 (542)
T ss_dssp TTTSCSCCSSCCCBSEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCEEEEEEE
T ss_pred eecccccccccccccEEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCceeEEEEec
Confidence 7655 3 457899999997653110 0 0 01248999999999 9999877543
No 407
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.51 E-value=1.9e-07 Score=105.36 Aligned_cols=56 Identities=16% Similarity=0.211 Sum_probs=47.6
Q ss_pred hhHHHHHHHHHhhhcCceEEeCCCeeEEEeCCCcEEEEeCCC---cEEeCCEEEEccCh
Q 035870 214 SHSYVNKVRKQLESWGCQIRTSSEVCSVLPADKGCTIVCGDG---SREFYNSCVMALHA 269 (842)
Q Consensus 214 ~~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G---~~~~ad~VV~A~p~ 269 (842)
...+.+.+.+.+++.|++|+++++|++|+.+++++.|++.++ +++.+|.||+|++.
T Consensus 220 ~~~~~~~l~~~l~~~Gv~v~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~D~vi~a~G~ 278 (476)
T 3lad_A 220 DEQVAKEAQKILTKQGLKILLGARVTGTEVKNKQVTVKFVDAEGEKSQAFDKLIVAVGR 278 (476)
T ss_dssp CHHHHHHHHHHHHHTTEEEEETCEEEEEEECSSCEEEEEESSSEEEEEEESEEEECSCE
T ss_pred CHHHHHHHHHHHHhCCCEEEECCEEEEEEEcCCEEEEEEEeCCCcEEEECCEEEEeeCC
Confidence 356788888889999999999999999999888887777654 57899999999873
No 408
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.51 E-value=6.6e-07 Score=100.89 Aligned_cols=55 Identities=13% Similarity=0.115 Sum_probs=47.0
Q ss_pred hHHHHHHHHHhhhcCceEEeCCCeeEEEeCCCc--EEEEeCCC-cEEeCCEEEEccCh
Q 035870 215 HSYVNKVRKQLESWGCQIRTSSEVCSVLPADKG--CTIVCGDG-SREFYNSCVMALHA 269 (842)
Q Consensus 215 ~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~--v~V~~~~G-~~~~ad~VV~A~p~ 269 (842)
..+.+.+.+.+++.|++|+++++|++|+.++++ +.|++.+| +++.+|.||+|+..
T Consensus 226 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~~v~~~~G~~~i~~D~vv~a~G~ 283 (479)
T 2hqm_A 226 ECIQNTITDHYVKEGINVHKLSKIVKVEKNVETDKLKIHMNDSKSIDDVDELIWTIGR 283 (479)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEEECC-CCCEEEEETTSCEEEEESEEEECSCE
T ss_pred HHHHHHHHHHHHhCCeEEEeCCEEEEEEEcCCCcEEEEEECCCcEEEEcCEEEECCCC
Confidence 467778888888889999999999999987655 78888899 78999999999863
No 409
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.51 E-value=2.3e-07 Score=104.99 Aligned_cols=55 Identities=22% Similarity=0.230 Sum_probs=48.0
Q ss_pred hHHHHHHHHHhhhcCceEEeCCCeeEEEeCCCc-EEEEeCCCcEEeCCEEEEccCh
Q 035870 215 HSYVNKVRKQLESWGCQIRTSSEVCSVLPADKG-CTIVCGDGSREFYNSCVMALHA 269 (842)
Q Consensus 215 ~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~-v~V~~~~G~~~~ad~VV~A~p~ 269 (842)
..+.+.+.+.++++|++|+++++|++|..++++ +.|++.+|+++.||.||+|+..
T Consensus 235 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~ 290 (495)
T 2wpf_A 235 ETIREEVTKQLTANGIEIMTNENPAKVSLNTDGSKHVTFESGKTLDVDVVMMAIGR 290 (495)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCE
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCceEEEEECCCcEEEcCEEEECCCC
Confidence 467788888899999999999999999987654 7888999989999999999864
No 410
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.51 E-value=2.8e-07 Score=101.72 Aligned_cols=56 Identities=16% Similarity=0.176 Sum_probs=48.1
Q ss_pred hHHHHHHHHHhhhcCceEEeCCCeeEEEeCCCcEEEEeCCCcEEeCCEEEEccChH
Q 035870 215 HSYVNKVRKQLESWGCQIRTSSEVCSVLPADKGCTIVCGDGSREFYNSCVMALHAP 270 (842)
Q Consensus 215 ~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VV~A~p~~ 270 (842)
..+.+.+.+.++++|++|+++++|++|..++....|++.+|+++.||.||+|++..
T Consensus 185 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~dg~~i~aD~Vv~a~G~~ 240 (410)
T 3ef6_A 185 RRIGAWLRGLLTELGVQVELGTGVVGFSGEGQLEQVMASDGRSFVADSALICVGAE 240 (410)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEECSSSCCEEEETTSCEEECSEEEECSCEE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEeccCcEEEEEECCCCEEEcCEEEEeeCCe
Confidence 45677788888889999999999999988765558999999999999999998743
No 411
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=98.51 E-value=4.1e-07 Score=96.79 Aligned_cols=37 Identities=32% Similarity=0.610 Sum_probs=33.8
Q ss_pred cEEEECCChHHHHHHHHHHhCCCeEEEEecCCCCCCCc
Q 035870 2 RVAVIGAGISGLVSAYVLAKAGVEVVLYEKDDYLGGHA 39 (842)
Q Consensus 2 dV~IIGaGiaGLsaA~~L~~~G~~V~VlEa~~~~GG~~ 39 (842)
||+|||||++||+||+.|++.|++|+|+|+ ..+||.+
T Consensus 18 dvvIIG~G~aGl~aA~~l~~~g~~v~lie~-~~~gg~~ 54 (319)
T 3cty_A 18 DVVIVGAGAAGFSAAVYAARSGFSVAILDK-AVAGGLT 54 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEES-SSTTGGG
T ss_pred cEEEECcCHHHHHHHHHHHhCCCcEEEEeC-CCCCccc
Confidence 799999999999999999999999999999 5677743
No 412
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=98.50 E-value=3.1e-07 Score=107.28 Aligned_cols=60 Identities=22% Similarity=0.246 Sum_probs=46.7
Q ss_pred cEEEECCChHHHHHHHHHHh-CCCeEEEEecCCCCCCCceeEeeCCeeeecceEeecCCCchhHHHHHHHcCCCccc
Q 035870 2 RVAVIGAGISGLVSAYVLAK-AGVEVVLYEKDDYLGGHAKTVTFDGVDLDLGFMVFNRVTYPNMMEFFESLGVDMEM 77 (842)
Q Consensus 2 dV~IIGaGiaGLsaA~~L~~-~G~~V~VlEa~~~~GG~~~s~~~~g~~~d~G~~~~~~~~~~~~~~l~~~lGl~~~~ 77 (842)
||+|||||++||++|+.|++ .|++|+|+|+.+.++...+ +.. ..++..++++++|+....
T Consensus 34 dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~~~~~~g~------------a~~----l~~~t~e~l~~lGl~~~~ 94 (639)
T 2dkh_A 34 DVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKEGPMELGQ------------ADG----IACRTMEMFEAFEFADSI 94 (639)
T ss_dssp EEEEECCSHHHHHHHHHHTTCTTSCEEEECSSSSCCSSCS------------CCE----ECHHHHHHHHHTTCHHHH
T ss_pred cEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCCCc------------eee----eCHHHHHHHHHcCcHHHH
Confidence 79999999999999999999 9999999999876543111 011 245677899999986554
No 413
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.50 E-value=3.9e-07 Score=102.75 Aligned_cols=55 Identities=9% Similarity=0.190 Sum_probs=46.4
Q ss_pred hHHHHHHHHHhhhcCceEEeCCCeeEEEeCCCc-EEEEe-----CCCcEEeCCEEEEccCh
Q 035870 215 HSYVNKVRKQLESWGCQIRTSSEVCSVLPADKG-CTIVC-----GDGSREFYNSCVMALHA 269 (842)
Q Consensus 215 ~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~-v~V~~-----~~G~~~~ad~VV~A~p~ 269 (842)
..+.+.+.+.++++|++|+++++|++|..++++ +.|++ .+++++.+|.||+|+..
T Consensus 220 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~i~~D~vv~a~G~ 280 (474)
T 1zmd_A 220 MEISKNFQRILQKQGFKFKLNTKVTGATKKSDGKIDVSIEAASGGKAEVITCDVLLVCIGR 280 (474)
T ss_dssp HHHHHHHHHHHHHTTCEEECSEEEEEEEECTTSCEEEEEEETTSCCCEEEEESEEEECSCE
T ss_pred HHHHHHHHHHHHHCCCEEEeCceEEEEEEcCCceEEEEEEecCCCCceEEEcCEEEECcCC
Confidence 467778888888899999999999999988776 77763 56678999999999864
No 414
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=98.49 E-value=5.6e-07 Score=102.19 Aligned_cols=55 Identities=15% Similarity=0.125 Sum_probs=45.9
Q ss_pred hHHHHHHHHHhhh-cCceEEeCCCeeEEEeCCCcE-EEEeCCCcEEeCCEEEEccChH
Q 035870 215 HSYVNKVRKQLES-WGCQIRTSSEVCSVLPADKGC-TIVCGDGSREFYNSCVMALHAP 270 (842)
Q Consensus 215 ~~l~~~L~~~l~~-~G~~i~~~~~V~~I~~~~~~v-~V~~~~G~~~~ad~VV~A~p~~ 270 (842)
..+.+.|.+.+++ .|++| ++++|+.|..+++++ .|.+.+|.++.||.||+|+...
T Consensus 123 ~~~~~~L~~~Le~~~GVeI-~~~~Vt~L~~e~g~V~GV~t~dG~~i~AdaVVLATG~~ 179 (637)
T 2zxi_A 123 KRYREYMKKVCENQENLYI-KQEEVVDIIVKNNQVVGVRTNLGVEYKTKAVVVTTGTF 179 (637)
T ss_dssp HHHHHHHHHHHHTCTTEEE-EESCEEEEEESSSBEEEEEETTSCEEECSEEEECCTTC
T ss_pred HHHHHHHHHHHHhCCCCEE-EEeEEEEEEecCCEEEEEEECCCcEEEeCEEEEccCCC
Confidence 3566777777877 48999 678999999888876 6889999899999999998864
No 415
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.49 E-value=4.5e-07 Score=102.13 Aligned_cols=55 Identities=13% Similarity=0.209 Sum_probs=45.6
Q ss_pred hHHHHHHHHHhhhcCceEEeCCCeeEEEeCCCcEEEEeC---CC--cEEeCCEEEEccCh
Q 035870 215 HSYVNKVRKQLESWGCQIRTSSEVCSVLPADKGCTIVCG---DG--SREFYNSCVMALHA 269 (842)
Q Consensus 215 ~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v~V~~~---~G--~~~~ad~VV~A~p~ 269 (842)
..+.+.+.+.+++.|++|+++++|++|..+++++.|++. +| +++.+|.||+|+..
T Consensus 218 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~ 277 (470)
T 1dxl_A 218 AEIRKQFQRSLEKQGMKFKLKTKVVGVDTSGDGVKLTVEPSAGGEQTIIEADVVLVSAGR 277 (470)
T ss_dssp HHHHHHHHHHHHHSSCCEECSEEEEEEECSSSSEEEEEEESSSCCCEEEEESEEECCCCE
T ss_pred HHHHHHHHHHHHHcCCEEEeCCEEEEEEEcCCeEEEEEEecCCCcceEEECCEEEECCCC
Confidence 467788888898899999999999999987777776654 44 67999999999864
No 416
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=98.49 E-value=5.9e-07 Score=100.83 Aligned_cols=55 Identities=18% Similarity=0.028 Sum_probs=42.7
Q ss_pred hHHHHHHHHHhhhcCceEEeCCCeeEEEeCCCcE-EEEe--CCCcEEeCCEEEEccChHH
Q 035870 215 HSYVNKVRKQLESWGCQIRTSSEVCSVLPADKGC-TIVC--GDGSREFYNSCVMALHAPD 271 (842)
Q Consensus 215 ~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v-~V~~--~~G~~~~ad~VV~A~p~~~ 271 (842)
..+.+.|.+.+++.|++|+.+++| +|..+++++ .|.. .+| ++.||.||+|+....
T Consensus 119 ~~l~~~L~~~~~~~gv~i~~~~~v-~l~~~~~~v~Gv~v~~~~g-~~~a~~VVlAtGg~~ 176 (472)
T 2e5v_A 119 REIFNFLLKLAREEGIPIIEDRLV-EIRVKDGKVTGFVTEKRGL-VEDVDKLVLATGGYS 176 (472)
T ss_dssp HHHHHHHHHHHHHTTCCEECCCEE-EEEEETTEEEEEEETTTEE-ECCCSEEEECCCCCG
T ss_pred HHHHHHHHHHHHhCCCEEEECcEE-EEEEeCCEEEEEEEEeCCC-eEEeeeEEECCCCCc
Confidence 467888888887789999999999 998877765 3333 344 578999999987543
No 417
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.48 E-value=2.3e-07 Score=105.13 Aligned_cols=56 Identities=11% Similarity=0.207 Sum_probs=46.6
Q ss_pred hhHHHHHHHHHhhhcCceEEeCCCeeEEEeCCCcEEEEeCC---C--cEEeCCEEEEccCh
Q 035870 214 SHSYVNKVRKQLESWGCQIRTSSEVCSVLPADKGCTIVCGD---G--SREFYNSCVMALHA 269 (842)
Q Consensus 214 ~~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v~V~~~~---G--~~~~ad~VV~A~p~ 269 (842)
...+.+.+.+.+++.|++|+++++|++|..+++++.|++.+ | +++.+|.||+|+..
T Consensus 238 d~~~~~~l~~~l~~~gV~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~Vi~a~G~ 298 (491)
T 3urh_A 238 DGEVAKQLQRMLTKQGIDFKLGAKVTGAVKSGDGAKVTFEPVKGGEATTLDAEVVLIATGR 298 (491)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSEEEEEEEEETTEEEEEEEETTSCCCEEEEESEEEECCCC
T ss_pred CHHHHHHHHHHHHhCCCEEEECCeEEEEEEeCCEEEEEEEecCCCceEEEEcCEEEEeeCC
Confidence 34677888888888999999999999999988887776652 5 57999999999863
No 418
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=98.48 E-value=4.6e-07 Score=92.70 Aligned_cols=110 Identities=21% Similarity=0.282 Sum_probs=85.8
Q ss_pred CCCCeEEEeccCchHHHHHHHHhc-CCEEEEEcCCHHHHHHHHHHHHHc--C-C-CCCeEEEEccccCCc--cCCCccEE
Q 035870 628 SKGQEVLEIGCGWGTLAIEIVKRT-GCKYTGITLSEEQLKYAEMKVKEA--G-L-QDLIRLYLCDYRQLA--KANKYDRI 700 (842)
Q Consensus 628 ~~~~~vLDiGcG~G~~~~~la~~~-~~~v~gid~s~~~~~~a~~~~~~~--~-l-~~~v~~~~~d~~~~~--~~~~fD~i 700 (842)
+...+||-||.|.|+.+..+++.+ ..+|+.+||+++.++.+++.+... + + .++++++.+|....- ..++||+|
T Consensus 82 p~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~~~yDvI 161 (294)
T 3o4f_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVI 161 (294)
T ss_dssp SCCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCSSCCEEEE
T ss_pred CCCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhccccCCEE
Confidence 456799999999999999999884 469999999999999999986531 2 1 358999999988765 55799999
Q ss_pred EEcchhhhcChh--hHHHHHHHHHhccccCcEEEEEeec
Q 035870 701 ISCEMIEAVGHE--FMEEFFGCCESLLAEDGLLVLQFIS 737 (842)
Q Consensus 701 ~s~~~~~~~~~~--~~~~~~~~~~~~LkpgG~~~~~~~~ 737 (842)
+.-..=..-+.+ .-.++++.+++.|+|||.++.+.-+
T Consensus 162 i~D~~dp~~~~~~L~t~eFy~~~~~~L~p~Gv~v~q~~s 200 (294)
T 3o4f_A 162 ISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNGV 200 (294)
T ss_dssp EESCCCCCCTTCCSSCCHHHHHHHHTEEEEEEEEEEEEE
T ss_pred EEeCCCcCCCchhhcCHHHHHHHHHHhCCCCEEEEecCC
Confidence 975321100001 2368999999999999999998654
No 419
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.48 E-value=2.8e-07 Score=106.48 Aligned_cols=55 Identities=11% Similarity=0.146 Sum_probs=47.8
Q ss_pred hHHHHHHHHHhhhcCceEEeCCCeeEEEe-------------------CCCcEEEEeCCCcEEeCCEEEEccCh
Q 035870 215 HSYVNKVRKQLESWGCQIRTSSEVCSVLP-------------------ADKGCTIVCGDGSREFYNSCVMALHA 269 (842)
Q Consensus 215 ~~l~~~L~~~l~~~G~~i~~~~~V~~I~~-------------------~~~~v~V~~~~G~~~~ad~VV~A~p~ 269 (842)
..+.+.+.+.+++.|+++++++.|++|.. .++++.+++.+|+++.||.||+|++.
T Consensus 192 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~ 265 (565)
T 3ntd_A 192 REMAGFAHQAIRDQGVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIKGHLSLTLSNGELLETDLLIMAIGV 265 (565)
T ss_dssp HHHHHHHHHHHHHTTCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTTCEEEEEETTSCEEEESEEEECSCE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCeEEEEeccccccccccccccccccccCCCcEEEEEcCCCEEEcCEEEECcCC
Confidence 46777888888889999999999999987 46678888889989999999999874
No 420
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.47 E-value=1e-06 Score=99.84 Aligned_cols=55 Identities=16% Similarity=0.268 Sum_probs=47.9
Q ss_pred hHHHHHHHHHhhhcCceEEeCCCeeEEEeCCCc-EEEEeCCCcE-EeCCEEEEccCh
Q 035870 215 HSYVNKVRKQLESWGCQIRTSSEVCSVLPADKG-CTIVCGDGSR-EFYNSCVMALHA 269 (842)
Q Consensus 215 ~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~-v~V~~~~G~~-~~ad~VV~A~p~ 269 (842)
..+.+.+.+.++++|++|+++++|++|+.++++ +.|++.+|++ +.+|.||+|++.
T Consensus 217 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~D~vi~a~G~ 273 (500)
T 1onf_A 217 ESVINVLENDMKKNNINIVTFADVVEIKKVSDKNLSIHLSDGRIYEHFDHVIYCVGR 273 (500)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEESSTTCEEEEETTSCEEEEESEEEECCCB
T ss_pred hhhHHHHHHHHHhCCCEEEECCEEEEEEEcCCceEEEEECCCcEEEECCEEEECCCC
Confidence 467788888999999999999999999987544 7888889987 999999999864
No 421
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=98.47 E-value=1.2e-06 Score=101.06 Aligned_cols=57 Identities=16% Similarity=0.093 Sum_probs=46.0
Q ss_pred hHHHHHHHHHhhhcC-ceEEeCCCeeEEEeCCCcE---EEE-eCCCc--EEeCCEEEEccChHH
Q 035870 215 HSYVNKVRKQLESWG-CQIRTSSEVCSVLPADKGC---TIV-CGDGS--REFYNSCVMALHAPD 271 (842)
Q Consensus 215 ~~l~~~L~~~l~~~G-~~i~~~~~V~~I~~~~~~v---~V~-~~~G~--~~~ad~VV~A~p~~~ 271 (842)
..+...|.+.+.+.| ++|+++++|++|..+++++ .+. +.+|+ ++.|+.||+|+....
T Consensus 134 ~~l~~~L~~~~~~~gnv~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~s 197 (602)
T 1kf6_A 134 FHMLHTLFQTSLQFPQIQRFDEHFVLDILVDDGHVRGLVAMNMMEGTLVQIRANAVVMATGGAG 197 (602)
T ss_dssp HHHHHHHHHHHTTCTTEEEEETEEEEEEEEETTEEEEEEEEETTTTEEEEEECSCEEECCCCCG
T ss_pred HHHHHHHHHHHHhCCCcEEEeCCEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCCc
Confidence 478889999998888 9999999999999887753 233 25776 689999999987653
No 422
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=98.47 E-value=6.4e-07 Score=102.15 Aligned_cols=36 Identities=33% Similarity=0.477 Sum_probs=32.7
Q ss_pred cEEEECCChHHHHHHHHHHhCCCeEEEEecCCCCCCC
Q 035870 2 RVAVIGAGISGLVSAYVLAKAGVEVVLYEKDDYLGGH 38 (842)
Q Consensus 2 dV~IIGaGiaGLsaA~~L~~~G~~V~VlEa~~~~GG~ 38 (842)
||+|||||++||+||+.|++ |.+|+|||+....||.
T Consensus 10 DVvVVG~G~AGl~aAl~la~-G~~V~vlEk~~~~~g~ 45 (540)
T 1chu_A 10 DVLIIGSGAAGLSLALRLAD-QHQVIVLSKGPVTEGS 45 (540)
T ss_dssp SEEEECCSHHHHHHHHHHTT-TSCEEEECSSCTTC--
T ss_pred CEEEECccHHHHHHHHHHhc-CCcEEEEECCCCCCCC
Confidence 89999999999999999999 9999999998877763
No 423
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.46 E-value=7.8e-07 Score=100.05 Aligned_cols=55 Identities=9% Similarity=0.050 Sum_probs=47.0
Q ss_pred hHHHHHHHHHhhhcCceEEeCCCeeEEEeCCCcEEEEeCCCcEEeCCEEEEccChH
Q 035870 215 HSYVNKVRKQLESWGCQIRTSSEVCSVLPADKGCTIVCGDGSREFYNSCVMALHAP 270 (842)
Q Consensus 215 ~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VV~A~p~~ 270 (842)
..+.+.+.+.++++|++|+++++|++|..+++.+.|++. ++++.||.||+|+...
T Consensus 216 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~v~~~-~~~i~aD~Vv~a~G~~ 270 (467)
T 1zk7_A 216 PAIGEAVTAAFRAEGIEVLEHTQASQVAHMDGEFVLTTT-HGELRADKLLVATGRT 270 (467)
T ss_dssp HHHHHHHHHHHHHTTCEEETTCCEEEEEEETTEEEEEET-TEEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEC-CcEEEcCEEEECCCCC
Confidence 467888889999999999999999999987777778776 4589999999998753
No 424
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.46 E-value=5.3e-07 Score=95.42 Aligned_cols=50 Identities=16% Similarity=0.218 Sum_probs=40.1
Q ss_pred HHHHhhhcCceEEeCCCeeEEEeCC---CcEEEEeCCCcEEeCCEEEEccChH
Q 035870 221 VRKQLESWGCQIRTSSEVCSVLPAD---KGCTIVCGDGSREFYNSCVMALHAP 270 (842)
Q Consensus 221 L~~~l~~~G~~i~~~~~V~~I~~~~---~~v~V~~~~G~~~~ad~VV~A~p~~ 270 (842)
+.+.+++.|++++.+++|+.|..+. +.+.|++.+|+++.+|+||+|+...
T Consensus 62 ~~~~~~~~~v~~~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~~~lv~AtG~~ 114 (310)
T 1fl2_A 62 LKVHVDEYDVDVIDSQSASKLIPAAVEGGLHQIETASGAVLKARSIIVATGAK 114 (310)
T ss_dssp HHHHHHTSCEEEECSCCEEEEECCSSTTCCEEEEETTSCEEEEEEEEECCCEE
T ss_pred HHHHHHHcCCeEEccCEEEEEEecccCCceEEEEECCCCEEEeCEEEECcCCC
Confidence 3344455589999999999998753 3688999999889999999998753
No 425
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=98.45 E-value=6.5e-07 Score=102.09 Aligned_cols=54 Identities=19% Similarity=0.137 Sum_probs=45.1
Q ss_pred HHHHHHHHHhhh-cCceEEeCCCeeEEEeCCCcE-EEEeCCCcEEeCCEEEEccChH
Q 035870 216 SYVNKVRKQLES-WGCQIRTSSEVCSVLPADKGC-TIVCGDGSREFYNSCVMALHAP 270 (842)
Q Consensus 216 ~l~~~L~~~l~~-~G~~i~~~~~V~~I~~~~~~v-~V~~~~G~~~~ad~VV~A~p~~ 270 (842)
.+...|.+.+++ .|++| ++++|+.|..+++++ .|.+.+|.++.||.||+|+...
T Consensus 125 ~~~~~L~e~Le~~~GV~I-~~~~V~~L~~e~g~V~GV~t~dG~~I~Ad~VVLATGt~ 180 (651)
T 3ces_A 125 LYRQAVRTALENQPNLMI-FQQAVEDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTF 180 (651)
T ss_dssp HHHHHHHHHHHTCTTEEE-EECCEEEEEESSSBEEEEEETTSEEEEEEEEEECCSTT
T ss_pred HHHHHHHHHHHhCCCCEE-EEEEEEEEEecCCEEEEEEECCCCEEECCEEEEcCCCC
Confidence 566777777777 58999 678999999888776 7888889889999999998765
No 426
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.45 E-value=3.2e-07 Score=91.64 Aligned_cols=118 Identities=15% Similarity=0.173 Sum_probs=77.9
Q ss_pred HHHHHHHHHcCCCCCCeEEEeccCchHHHHHHHHhcC-CEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCc-c
Q 035870 616 RKVSLLIEKARVSKGQEVLEIGCGWGTLAIEIVKRTG-CKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLA-K 693 (842)
Q Consensus 616 ~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~-~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~-~ 693 (842)
.|+..+.++..++++.+|||+|||+|+++..++++.+ ..|+|+|++.++....... ...+. ++.....++.... +
T Consensus 61 ~KL~ei~ek~~l~~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvDl~~~pi~~-~~~g~--~ii~~~~~~dv~~l~ 137 (277)
T 3evf_A 61 AKLRWFHERGYVKLEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDGHEKPMNV-QSLGW--NIITFKDKTDIHRLE 137 (277)
T ss_dssp HHHHHHHHTTSSCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTCCCCCCC-CBTTG--GGEEEECSCCTTTSC
T ss_pred HHHHHHHHhCCCCCCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEeccCccccccc-CcCCC--CeEEEeccceehhcC
Confidence 4666777776678999999999999999999987733 4788999885431111000 00011 3444555543333 4
Q ss_pred CCCccEEEEcchhhhcChhhH-----HHHHHHHHhccccC-cEEEEEeec
Q 035870 694 ANKYDRIISCEMIEAVGHEFM-----EEFFGCCESLLAED-GLLVLQFIS 737 (842)
Q Consensus 694 ~~~fD~i~s~~~~~~~~~~~~-----~~~~~~~~~~Lkpg-G~~~~~~~~ 737 (842)
.++||+|+|..+.. .+.... ..+++.+.++|||| |.|++-.+.
T Consensus 138 ~~~~DlVlsD~apn-sG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~KVf~ 186 (277)
T 3evf_A 138 PVKCDTLLCDIGES-SSSSVTEGERTVRVLDTVEKWLACGVDNFCVKVLA 186 (277)
T ss_dssp CCCCSEEEECCCCC-CSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESC
T ss_pred CCCccEEEecCccC-cCchHHHHHHHHHHHHHHHHHhCCCCCeEEEEecC
Confidence 57899999976554 333222 23468889999999 999996554
No 427
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.44 E-value=9.6e-07 Score=99.21 Aligned_cols=55 Identities=20% Similarity=0.251 Sum_probs=46.0
Q ss_pred hHHHHHHHHHhhhcCceEEeCCCeeEEEeCCCcEEEEeC-CC--cEEeCCEEEEccCh
Q 035870 215 HSYVNKVRKQLESWGCQIRTSSEVCSVLPADKGCTIVCG-DG--SREFYNSCVMALHA 269 (842)
Q Consensus 215 ~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v~V~~~-~G--~~~~ad~VV~A~p~ 269 (842)
..+.+.+.+.++++|++|+++++|++|..+++++.|++. +| +++.+|.||+|+..
T Consensus 212 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~g~~~~~~~D~vv~a~G~ 269 (464)
T 2a8x_A 212 ADVSKEIEKQFKKLGVTILTATKVESIADGGSQVTVTVTKDGVAQELKAEKVLQAIGF 269 (464)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCEEEEEEECSSCEEEEEESSSCEEEEEESEEEECSCE
T ss_pred HHHHHHHHHHHHHcCCEEEeCcEEEEEEEcCCeEEEEEEcCCceEEEEcCEEEECCCC
Confidence 467777888888889999999999999988777777764 56 57999999999864
No 428
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.43 E-value=5.1e-07 Score=102.03 Aligned_cols=48 Identities=17% Similarity=0.165 Sum_probs=39.9
Q ss_pred HHhhhcCceEEeCCCeeEEEeCCCcEEEEeCCCcEEeCCEEEEccChH
Q 035870 223 KQLESWGCQIRTSSEVCSVLPADKGCTIVCGDGSREFYNSCVMALHAP 270 (842)
Q Consensus 223 ~~l~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VV~A~p~~ 270 (842)
+.++++|++|++++.|++|..+++...|++.+|+++.||.||+++...
T Consensus 265 ~~l~~~GV~v~~~~~v~~i~~~~~v~~v~~~~g~~i~aD~Vv~a~G~~ 312 (493)
T 1y56_A 265 QELERWGIDYVHIPNVKRVEGNEKVERVIDMNNHEYKVDALIFADGRR 312 (493)
T ss_dssp HHHHHHTCEEEECSSEEEEECSSSCCEEEETTCCEEECSEEEECCCEE
T ss_pred HHHHhCCcEEEeCCeeEEEecCCceEEEEeCCCeEEEeCEEEECCCcC
Confidence 556677999999999999987654456778889899999999998743
No 429
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.40 E-value=3.6e-07 Score=102.31 Aligned_cols=56 Identities=14% Similarity=0.204 Sum_probs=45.9
Q ss_pred hhHHHHHHHHHhhhcCceEEeCCCeeEEEeCCCcEEEEeCCCcEEeCCEEEEccCh
Q 035870 214 SHSYVNKVRKQLESWGCQIRTSSEVCSVLPADKGCTIVCGDGSREFYNSCVMALHA 269 (842)
Q Consensus 214 ~~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VV~A~p~ 269 (842)
...+.+.+.+.++++|++|+++++|++|..+++++...+.+|+++.||.||+|++.
T Consensus 190 ~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~v~~v~~~g~~i~~D~vv~a~G~ 245 (452)
T 2cdu_A 190 DKEFTDILAKDYEAHGVNLVLGSKVAAFEEVDDEIITKTLDGKEIKSDIAILCIGF 245 (452)
T ss_dssp CHHHHHHHHHHHHHTTCEEEESSCEEEEEEETTEEEEEETTSCEEEESEEEECCCE
T ss_pred hhhHHHHHHHHHHHCCCEEEcCCeeEEEEcCCCeEEEEEeCCCEEECCEEEECcCC
Confidence 34678888889999999999999999999766666533347888999999999864
No 430
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.40 E-value=5.8e-07 Score=101.08 Aligned_cols=36 Identities=22% Similarity=0.285 Sum_probs=34.1
Q ss_pred cEEEECCChHHHHHHHHHHhCC-----CeEEEEecCCCCCC
Q 035870 2 RVAVIGAGISGLVSAYVLAKAG-----VEVVLYEKDDYLGG 37 (842)
Q Consensus 2 dV~IIGaGiaGLsaA~~L~~~G-----~~V~VlEa~~~~GG 37 (842)
||+|||||++||+||..|++.| .+|+|||+++.+|.
T Consensus 32 dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g~ 72 (463)
T 3s5w_A 32 DLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYRW 72 (463)
T ss_dssp SEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCCS
T ss_pred CEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCCC
Confidence 7999999999999999999999 99999999998774
No 431
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.40 E-value=4.6e-07 Score=96.35 Aligned_cols=45 Identities=13% Similarity=0.173 Sum_probs=36.5
Q ss_pred HHhhhcCceEEeCCCeeEEEeCCCcEEEEeCCCcEEeCCEEEEccCh
Q 035870 223 KQLESWGCQIRTSSEVCSVLPADKGCTIVCGDGSREFYNSCVMALHA 269 (842)
Q Consensus 223 ~~l~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VV~A~p~ 269 (842)
+.+++.|++++.++ |+.|+.+++.+.| +.+|+++.+|+||+|+..
T Consensus 70 ~~~~~~~~~~~~~~-v~~i~~~~~~~~v-~~~~~~~~~~~lv~AtG~ 114 (320)
T 1trb_A 70 EHATKFETEIIFDH-INKVDLQNRPFRL-NGDNGEYTCDALIIATGA 114 (320)
T ss_dssp HHHHHTTCEEECCC-EEEEECSSSSEEE-EESSCEEEEEEEEECCCE
T ss_pred HHHHHCCCEEEEee-eeEEEecCCEEEE-EeCCCEEEcCEEEECCCC
Confidence 33444588999986 9999988888888 667778999999999764
No 432
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.39 E-value=8.7e-07 Score=98.38 Aligned_cols=55 Identities=18% Similarity=0.296 Sum_probs=47.2
Q ss_pred hHHHHHHHHHhhhcCceEEeCCCeeEEEe--CCCcE-EEEeCCCcEEeCCEEEEccCh
Q 035870 215 HSYVNKVRKQLESWGCQIRTSSEVCSVLP--ADKGC-TIVCGDGSREFYNSCVMALHA 269 (842)
Q Consensus 215 ~~l~~~L~~~l~~~G~~i~~~~~V~~I~~--~~~~v-~V~~~~G~~~~ad~VV~A~p~ 269 (842)
..+.+.+.+.+++.|++|+++++|++|.. +++++ .|++.+|+++.||.||+|++.
T Consensus 191 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~v~~~~G~~i~~D~Vv~a~G~ 248 (431)
T 1q1r_A 191 PPVSAFYEHLHREAGVDIRTGTQVCGFEMSTDQQKVTAVLCEDGTRLPADLVIAGIGL 248 (431)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEEECTTTCCEEEEEETTSCEEECSEEEECCCE
T ss_pred HHHHHHHHHHHHhCCeEEEeCCEEEEEEeccCCCcEEEEEeCCCCEEEcCEEEECCCC
Confidence 46777888888888999999999999997 55565 788889989999999999874
No 433
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=98.38 E-value=1.4e-06 Score=99.20 Aligned_cols=54 Identities=13% Similarity=0.124 Sum_probs=44.0
Q ss_pred HHHHHHHHHhhhc-CceEEeCCCeeEEEeCCCcEE-EEeCCCcEEeCCEEEEccChH
Q 035870 216 SYVNKVRKQLESW-GCQIRTSSEVCSVLPADKGCT-IVCGDGSREFYNSCVMALHAP 270 (842)
Q Consensus 216 ~l~~~L~~~l~~~-G~~i~~~~~V~~I~~~~~~v~-V~~~~G~~~~ad~VV~A~p~~ 270 (842)
.+...|.+.+++. |++|+ +..|+.|..++++|. |.+.+|+++.||.||+|+..+
T Consensus 118 ~l~~~L~~~l~~~~GV~I~-~~~V~~L~~d~g~V~GV~t~~G~~i~Ad~VVLATG~~ 173 (641)
T 3cp8_A 118 QYSLYMRRIVEHEPNIDLL-QDTVIGVSANSGKFSSVTVRSGRAIQAKAAILACGTF 173 (641)
T ss_dssp HHHHHHHHHHHTCTTEEEE-ECCEEEEEEETTEEEEEEETTSCEEEEEEEEECCTTC
T ss_pred HHHHHHHHHHHhCCCCEEE-eeEEEEEEecCCEEEEEEECCCcEEEeCEEEECcCCC
Confidence 5666777777764 88984 569999998888875 889999899999999998765
No 434
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=98.38 E-value=8.6e-07 Score=90.03 Aligned_cols=107 Identities=17% Similarity=0.141 Sum_probs=73.3
Q ss_pred CCCCCeEEEeccCchHHHHHHHHh--------cC-----CEEEEEcCCH---HHHH-----------HHHHHHHHc----
Q 035870 627 VSKGQEVLEIGCGWGTLAIEIVKR--------TG-----CKYTGITLSE---EQLK-----------YAEMKVKEA---- 675 (842)
Q Consensus 627 ~~~~~~vLDiGcG~G~~~~~la~~--------~~-----~~v~gid~s~---~~~~-----------~a~~~~~~~---- 675 (842)
.+++.+|||||||+|..+..+++. +. .+++++|..+ +.+. .|++.++..
T Consensus 58 ~~~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~ 137 (257)
T 2qy6_A 58 PHPLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPL 137 (257)
T ss_dssp SSSEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSC
T ss_pred CCCCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccccc
Confidence 345679999999999988876553 22 4899999765 4444 566666541
Q ss_pred ------CCC---CCeEEEEccccCC-c-c-C---CCccEEEEcch-hhhcChhhHHHHHHHHHhccccCcEEEE
Q 035870 676 ------GLQ---DLIRLYLCDYRQL-A-K-A---NKYDRIISCEM-IEAVGHEFMEEFFGCCESLLAEDGLLVL 733 (842)
Q Consensus 676 ------~l~---~~v~~~~~d~~~~-~-~-~---~~fD~i~s~~~-~~~~~~~~~~~~~~~~~~~LkpgG~~~~ 733 (842)
.+. .+++++.+|+.+. + . + ..||+|+.-.. -...++-..+++|+.+.++|||||+++.
T Consensus 138 ~g~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~fsp~~~p~lw~~~~l~~l~~~L~pGG~l~t 211 (257)
T 2qy6_A 138 PGCHRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLAT 211 (257)
T ss_dssp SEEEEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECSSCTTTCGGGCCHHHHHHHHHHEEEEEEEEE
T ss_pred cchhheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECCCCcccChhhcCHHHHHHHHHHcCCCcEEEE
Confidence 121 2678999998773 3 1 1 27999998542 1112211247899999999999999885
No 435
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=98.38 E-value=1.4e-06 Score=92.46 Aligned_cols=121 Identities=13% Similarity=0.140 Sum_probs=95.3
Q ss_pred HHHHcCCCCCCeEEEeccCchHHHHHHHHh-cCCEEEEEcCCHHHHHHHHHHHHHcCCC-----CCeEEEEccccCCc--
Q 035870 621 LIEKARVSKGQEVLEIGCGWGTLAIEIVKR-TGCKYTGITLSEEQLKYAEMKVKEAGLQ-----DLIRLYLCDYRQLA-- 692 (842)
Q Consensus 621 l~~~l~~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gid~s~~~~~~a~~~~~~~~l~-----~~v~~~~~d~~~~~-- 692 (842)
....|+++||++|||+++|.|+-+.++++. .+..|+++|+|+.-++..++++++.+.. .++.+...|.+.++
T Consensus 140 ~~~~L~~~pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~~ 219 (359)
T 4fzv_A 140 PVLALGLQPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGEL 219 (359)
T ss_dssp HHHHHCCCTTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHHH
T ss_pred HHHHhCCCCCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcchh
Confidence 345678899999999999999999999987 3347999999999999999999887653 47899999988876
Q ss_pred cCCCccEEEEcch--------hhhc-------Ch-------hhHHHHHHHHHhccccCcEEEEEeecCCCc
Q 035870 693 KANKYDRIISCEM--------IEAV-------GH-------EFMEEFFGCCESLLAEDGLLVLQFISIPDE 741 (842)
Q Consensus 693 ~~~~fD~i~s~~~--------~~~~-------~~-------~~~~~~~~~~~~~LkpgG~~~~~~~~~~~~ 741 (842)
..+.||.|+.-.. +..- .. ....+++....++|||||+++..+++....
T Consensus 220 ~~~~fD~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsTCSl~~~ 290 (359)
T 4fzv_A 220 EGDTYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSLSHL 290 (359)
T ss_dssp STTCEEEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEESCCCTT
T ss_pred ccccCCEEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEeCCCchh
Confidence 4578999997321 1100 00 123577889999999999999998886554
No 436
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.36 E-value=7.4e-07 Score=101.41 Aligned_cols=51 Identities=16% Similarity=0.205 Sum_probs=40.9
Q ss_pred HHHHHhhhcCceEEeCCCeeEEEeCC---CcEEEEeCCCcEEeCCEEEEccChH
Q 035870 220 KVRKQLESWGCQIRTSSEVCSVLPAD---KGCTIVCGDGSREFYNSCVMALHAP 270 (842)
Q Consensus 220 ~L~~~l~~~G~~i~~~~~V~~I~~~~---~~v~V~~~~G~~~~ad~VV~A~p~~ 270 (842)
.+.+.+++.|++++.+++|++|..+. +.+.|++.+|+++.||+||+|+...
T Consensus 272 ~l~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~V~~~~g~~~~~d~vVlAtG~~ 325 (521)
T 1hyu_A 272 ALKAHVSDYDVDVIDSQSASKLVPAATEGGLHQIETASGAVLKARSIIIATGAK 325 (521)
T ss_dssp HHHHHHHTSCEEEECSCCEEEEECCSSTTSCEEEEETTSCEEEEEEEEECCCEE
T ss_pred HHHHHHHHcCCEEEcCCEEEEEEeccCCCceEEEEECCCCEEEcCEEEECCCCC
Confidence 34445556689999999999998652 3688999999899999999998753
No 437
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=98.36 E-value=5.5e-07 Score=96.49 Aligned_cols=37 Identities=32% Similarity=0.530 Sum_probs=33.2
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCeEEEEecCCCCCCC
Q 035870 1 MRVAVIGAGISGLVSAYVLAKAGVEVVLYEKDDYLGGH 38 (842)
Q Consensus 1 kdV~IIGaGiaGLsaA~~L~~~G~~V~VlEa~~~~GG~ 38 (842)
+||+|||||++||+||+.|++.|++|+|+|+. .+||.
T Consensus 15 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~ 51 (335)
T 2a87_A 15 RDVIVIGSGPAGYTAALYAARAQLAPLVFEGT-SFGGA 51 (335)
T ss_dssp EEEEEECCHHHHHHHHHHHHHTTCCCEEECCS-SCSCG
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEecC-CCCCc
Confidence 37999999999999999999999999999974 66763
No 438
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=98.35 E-value=5.9e-06 Score=96.30 Aligned_cols=55 Identities=13% Similarity=0.091 Sum_probs=42.7
Q ss_pred HHHHHHHHHhhhc-Cc-eEEeCCCeeEEEeCCC---cE-EEE---eCCCc--EEeCCEEEEccChH
Q 035870 216 SYVNKVRKQLESW-GC-QIRTSSEVCSVLPADK---GC-TIV---CGDGS--REFYNSCVMALHAP 270 (842)
Q Consensus 216 ~l~~~L~~~l~~~-G~-~i~~~~~V~~I~~~~~---~v-~V~---~~~G~--~~~ad~VV~A~p~~ 270 (842)
.+...|.+.+++. |+ +|+.+++|++|..+++ +| .|. ..+|+ ++.|+.||+|+...
T Consensus 152 ~~~~~l~~~~~~~~gv~~i~~~~~v~~L~~~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGG~ 217 (643)
T 1jnr_A 152 SYKPIIAEAAKMAVGEENIYERVFIFELLKDNNDPNAVAGAVGFSVREPKFYVFKAKAVILATGGA 217 (643)
T ss_dssp THHHHHHHHHHHHHCGGGEECSEEEEEEEECTTCTTBEEEEEEEESSSSCEEEEECSEEEECCCCB
T ss_pred HHHHHHHHHHHhcCCCcEEEecCEEEEEEEcCCccceeEEEEEEEecCCcEEEEEcCEEEECCCcc
Confidence 5667777777777 99 9999999999998776 64 333 25665 58999999998765
No 439
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=98.35 E-value=2.9e-06 Score=95.63 Aligned_cols=56 Identities=16% Similarity=0.099 Sum_probs=45.9
Q ss_pred hhHHHHHHHHHhhhcCceEEeCCCeeEEEeCCCc--EEEEeCC---C----cEEeCCEEEEccCh
Q 035870 214 SHSYVNKVRKQLESWGCQIRTSSEVCSVLPADKG--CTIVCGD---G----SREFYNSCVMALHA 269 (842)
Q Consensus 214 ~~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~--v~V~~~~---G----~~~~ad~VV~A~p~ 269 (842)
...+.+.+.+.+++.|++|+++++|++|+.++++ +.|++.+ | +++.+|.||+|++.
T Consensus 227 d~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~g~~~~~D~vi~a~G~ 291 (478)
T 3dk9_A 227 DSMISTNCTEELENAGVEVLKFSQVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIGR 291 (478)
T ss_dssp CHHHHHHHHHHHHHTTCEEETTEEEEEEEECSSSEEEEEEECCTTSCCEEEEEEEESEEEECSCE
T ss_pred CHHHHHHHHHHHHHCCCEEEeCCEEEEEEEcCCCcEEEEEEccCCCCcccceEEEcCEEEEeecc
Confidence 3467788888888899999999999999987666 6777765 2 57899999999864
No 440
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=98.35 E-value=2.1e-07 Score=99.40 Aligned_cols=40 Identities=40% Similarity=0.591 Sum_probs=36.7
Q ss_pred CcEEEECCChHHHHHHHHHHh--CCCeEEEEecCCCCCCCce
Q 035870 1 MRVAVIGAGISGLVSAYVLAK--AGVEVVLYEKDDYLGGHAK 40 (842)
Q Consensus 1 kdV~IIGaGiaGLsaA~~L~~--~G~~V~VlEa~~~~GG~~~ 40 (842)
.||+|||||+|||+||++|++ .|++|+|+|+++.+||.+.
T Consensus 66 ~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~GG~~~ 107 (326)
T 3fpz_A 66 SDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSW 107 (326)
T ss_dssp ESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTT
T ss_pred CCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCCceEE
Confidence 389999999999999999975 5999999999999999775
No 441
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=98.34 E-value=8.9e-07 Score=96.54 Aligned_cols=41 Identities=20% Similarity=0.235 Sum_probs=35.5
Q ss_pred hcCceEEeCCCeeEEEeCCCcEEEEeCCCcEEeCCEEEEccCh
Q 035870 227 SWGCQIRTSSEVCSVLPADKGCTIVCGDGSREFYNSCVMALHA 269 (842)
Q Consensus 227 ~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VV~A~p~ 269 (842)
+.|++++++++|++|+.++. .|++++|+++.+|+||+|+..
T Consensus 74 ~~~i~~~~~~~V~~id~~~~--~v~~~~g~~~~yd~lvlAtG~ 114 (385)
T 3klj_A 74 KNNIKVITSEFATSIDPNNK--LVTLKSGEKIKYEKLIIASGS 114 (385)
T ss_dssp HTTCEEECSCCEEEEETTTT--EEEETTSCEEECSEEEECCCE
T ss_pred HCCCEEEeCCEEEEEECCCC--EEEECCCCEEECCEEEEecCC
Confidence 34899999999999998776 567788989999999999874
No 442
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=98.33 E-value=7.4e-07 Score=98.15 Aligned_cols=47 Identities=9% Similarity=-0.106 Sum_probs=41.4
Q ss_pred HHHhhhcCceEEeCCCeeEEEeCCCcEEEEeCCCcEEeCCEEEEccC
Q 035870 222 RKQLESWGCQIRTSSEVCSVLPADKGCTIVCGDGSREFYNSCVMALH 268 (842)
Q Consensus 222 ~~~l~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VV~A~p 268 (842)
.+.+++.|+++++++.|+.++.+++...|++.+|+++.||.||+++|
T Consensus 209 ~~~l~~~gi~v~~~~~v~~v~~~~~~~~v~~~~g~~i~~D~vi~~~g 255 (401)
T 3vrd_B 209 GFGTENALIEWHPGPDAAVVKTDTEAMTVETSFGETFKAAVINLIPP 255 (401)
T ss_dssp CTTSTTCSEEEECTTTTCEEEEETTTTEEEETTSCEEECSEEEECCC
T ss_pred HHHHHhcCcEEEeCceEEEEEecccceEEEcCCCcEEEeeEEEEecC
Confidence 33456789999999999999998888889999999999999999876
No 443
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=98.29 E-value=1.2e-06 Score=92.76 Aligned_cols=158 Identities=14% Similarity=0.164 Sum_probs=105.4
Q ss_pred CCCeEEEeccCchHHHHHHHHh-----------------cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEcccc--
Q 035870 629 KGQEVLEIGCGWGTLAIEIVKR-----------------TGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYR-- 689 (842)
Q Consensus 629 ~~~~vLDiGcG~G~~~~~la~~-----------------~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~-- 689 (842)
...+|+|+||++|..++.+... +..+|+..|+.......+-+.+....-..+..|..+.-.
T Consensus 51 ~~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvpgSF 130 (359)
T 1m6e_X 51 TRLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGSF 130 (359)
T ss_dssp SEECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESCS
T ss_pred CceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhcccCCCEEEEecchhh
Confidence 3468999999999777654433 236899999998888887766543110012345554422
Q ss_pred --CCccCCCccEEEEcchhhhcCh-------------------------------hhHHHHHHHHHhccccCcEEEEEee
Q 035870 690 --QLAKANKYDRIISCEMIEAVGH-------------------------------EFMEEFFGCCESLLAEDGLLVLQFI 736 (842)
Q Consensus 690 --~~~~~~~fD~i~s~~~~~~~~~-------------------------------~~~~~~~~~~~~~LkpgG~~~~~~~ 736 (842)
.+-+++++|.|+|+.++|++.+ +++..+|+..++.|+|||++++...
T Consensus 131 y~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl~~~ 210 (359)
T 1m6e_X 131 YGRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLTIL 210 (359)
T ss_dssp SSCCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEEEEE
T ss_pred hhccCCCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEEe
Confidence 2337899999999999999753 1355679999999999999999988
Q ss_pred cCCCcc---------cccccC-----------ccchhhhcccCCCCCCCHHHHHHHHhhcCCcEEEEEEec
Q 035870 737 SIPDER---------YNEYRL-----------SSDFIKEYIFPGGCLPSLSRITSAMSVASRLCVEQVENI 787 (842)
Q Consensus 737 ~~~~~~---------~~~~~~-----------~~~~~~~~i~p~~~~~~~~~~~~~~~~~~gf~v~~~~~~ 787 (842)
..++.. ++.... ..+-+..+-.| -+.|+.+|+...+++..+|++..++.+
T Consensus 211 gr~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~ek~d~f~~P-~y~ps~~E~~~~ie~~G~F~i~~~e~~ 280 (359)
T 1m6e_X 211 GRRSEDRASTECCLIWQLLAMALNQMVSEGLIEEEKMDKFNIP-QYTPSPTEVEAEILKEGSFLIDHIEAS 280 (359)
T ss_dssp ECSSSSSSSTTTSTTTHHHHHHHHHHHHTTCSCCSTTGGGCCC-CBCCCSHHHHHHHHHTTTBCCEEEEEE
T ss_pred cCCCCCccccchHHHHHHHHHHHHHHHHccccchhhhhccCCC-ccCCCHHHHHHHHHHcCCceEEEEEEE
Confidence 776542 100000 00011123334 367899999999988446788887654
No 444
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=98.28 E-value=2.6e-06 Score=96.25 Aligned_cols=54 Identities=11% Similarity=0.148 Sum_probs=45.9
Q ss_pred hHHHHHHHHHhhhcCceEEeCCCeeEEEeCCCcEEEEeC--CC--cEEeCCEEEEccCh
Q 035870 215 HSYVNKVRKQLESWGCQIRTSSEVCSVLPADKGCTIVCG--DG--SREFYNSCVMALHA 269 (842)
Q Consensus 215 ~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v~V~~~--~G--~~~~ad~VV~A~p~ 269 (842)
..+.+.+.+.+++. ++|+++++|++|+.+++++.|++. +| +++.+|.||+|++.
T Consensus 215 ~~~~~~l~~~l~~~-V~i~~~~~v~~i~~~~~~v~v~~~~~~G~~~~i~~D~Vi~a~G~ 272 (492)
T 3ic9_A 215 EEMKRYAEKTFNEE-FYFDAKARVISTIEKEDAVEVIYFDKSGQKTTESFQYVLAATGR 272 (492)
T ss_dssp HHHHHHHHHHHHTT-SEEETTCEEEEEEECSSSEEEEEECTTCCEEEEEESEEEECSCC
T ss_pred HHHHHHHHHHHhhC-cEEEECCEEEEEEEcCCEEEEEEEeCCCceEEEECCEEEEeeCC
Confidence 46778888888877 999999999999998888888774 67 67999999999864
No 445
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=98.28 E-value=9.3e-07 Score=99.84 Aligned_cols=56 Identities=14% Similarity=0.177 Sum_probs=45.5
Q ss_pred hhHHHHHHHHHhhhcCceEEeCCCeeEEEeCCC-cEEEEeCCCc-----EEeCCEEEEccCh
Q 035870 214 SHSYVNKVRKQLESWGCQIRTSSEVCSVLPADK-GCTIVCGDGS-----REFYNSCVMALHA 269 (842)
Q Consensus 214 ~~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~-~v~V~~~~G~-----~~~ad~VV~A~p~ 269 (842)
...+.+.+.+.++++|++|+++++|++|+.+++ .+.|++.+++ ++.+|.||+|++.
T Consensus 226 d~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~~~~D~vi~a~G~ 287 (483)
T 3dgh_A 226 DQQMAELVAASMEERGIPFLRKTVPLSVEKQDDGKLLVKYKNVETGEESEDVYDTVLWAIGR 287 (483)
T ss_dssp CHHHHHHHHHHHHHTTCCEEETEEEEEEEECTTSCEEEEEEETTTCCEEEEEESEEEECSCE
T ss_pred CHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCcEEEEEecCCCCceeEEEcCEEEECccc
Confidence 346778888889999999999999999998655 4677766553 7899999999864
No 446
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=98.26 E-value=1.6e-06 Score=87.20 Aligned_cols=82 Identities=17% Similarity=0.185 Sum_probs=70.9
Q ss_pred HHHHHHHcCCCCCCeEEEeccCchHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCc-----
Q 035870 618 VSLLIEKARVSKGQEVLEIGCGWGTLAIEIVKRTGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLA----- 692 (842)
Q Consensus 618 ~~~l~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~----- 692 (842)
++.+++.+.++++..+||.+||.|+.+..++++ +++|+|+|.++++++.|++ ++. ++++++++|+.++.
T Consensus 11 l~e~le~L~~~~gg~~VD~T~G~GGHS~~il~~-~g~VigiD~Dp~Ai~~A~~-L~~----~rv~lv~~~f~~l~~~L~~ 84 (285)
T 1wg8_A 11 YQEALDLLAVRPGGVYVDATLGGAGHARGILER-GGRVIGLDQDPEAVARAKG-LHL----PGLTVVQGNFRHLKRHLAA 84 (285)
T ss_dssp HHHHHHHHTCCTTCEEEETTCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHH-TCC----TTEEEEESCGGGHHHHHHH
T ss_pred HHHHHHhhCCCCCCEEEEeCCCCcHHHHHHHHC-CCEEEEEeCCHHHHHHHHh-hcc----CCEEEEECCcchHHHHHHH
Confidence 357788889999999999999999999999998 8899999999999999998 643 48999999999885
Q ss_pred -cCCCccEEEEcch
Q 035870 693 -KANKYDRIISCEM 705 (842)
Q Consensus 693 -~~~~fD~i~s~~~ 705 (842)
..+++|.|+....
T Consensus 85 ~g~~~vDgIL~DLG 98 (285)
T 1wg8_A 85 LGVERVDGILADLG 98 (285)
T ss_dssp TTCSCEEEEEEECS
T ss_pred cCCCCcCEEEeCCc
Confidence 1257999998543
No 447
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.23 E-value=3.2e-06 Score=96.69 Aligned_cols=109 Identities=9% Similarity=0.031 Sum_probs=78.8
Q ss_pred CCCCeEEEeccCchHHHHHHHHhcC----CEEEEEcCCHHHHHHH--HHHHHHcCCCC---CeEEEEccccCCc--cCCC
Q 035870 628 SKGQEVLEIGCGWGTLAIEIVKRTG----CKYTGITLSEEQLKYA--EMKVKEAGLQD---LIRLYLCDYRQLA--KANK 696 (842)
Q Consensus 628 ~~~~~vLDiGcG~G~~~~~la~~~~----~~v~gid~s~~~~~~a--~~~~~~~~l~~---~v~~~~~d~~~~~--~~~~ 696 (842)
+++.+|||.|||+|.++..+++..+ .+++|+|+++.+++.| +.++..+++.. ...+...|+.+.. ..++
T Consensus 320 ~~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD~L~~~~~~~~k 399 (878)
T 3s1s_A 320 TEDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSSNNAPTITGEDVCSLNPEDFAN 399 (878)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEECCCGGGCCGGGGTT
T ss_pred CCCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCCCcceEEecchhcccccccCC
Confidence 4688999999999999999998742 5799999999999999 44433322211 2356667776643 4578
Q ss_pred ccEEEEcchhhh-cC-h-------------------------hhHHHHHHHHHhccccCcEEEEEee
Q 035870 697 YDRIISCEMIEA-VG-H-------------------------EFMEEFFGCCESLLAEDGLLVLQFI 736 (842)
Q Consensus 697 fD~i~s~~~~~~-~~-~-------------------------~~~~~~~~~~~~~LkpgG~~~~~~~ 736 (842)
||+|++|..+-. .. + +-...+++.+.++|||||++.+...
T Consensus 400 FDVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLAfIlP 466 (878)
T 3s1s_A 400 VSVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVISAIMP 466 (878)
T ss_dssp EEEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred CCEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcEEEEEEC
Confidence 999999987621 10 0 0134578889999999999988543
No 448
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=98.23 E-value=3.7e-07 Score=91.25 Aligned_cols=117 Identities=15% Similarity=0.152 Sum_probs=77.7
Q ss_pred HHHHHHHHHcCCCCCCeEEEeccCchHHHHHHHHh-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEc--cccCCc
Q 035870 616 RKVSLLIEKARVSKGQEVLEIGCGWGTLAIEIVKR-TGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLC--DYRQLA 692 (842)
Q Consensus 616 ~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~--d~~~~~ 692 (842)
.|+..+.++..++++.+|||+|||.|+++.+++++ ....|+|+|++..+...+... ...+ .++..... |+..++
T Consensus 77 fKL~ei~eK~~Lk~~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~~~~pi~~-~~~g--~~ii~~~~~~dv~~l~ 153 (282)
T 3gcz_A 77 AKLRWMEERGYVKPTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQGHEKPIMR-TTLG--WNLIRFKDKTDVFNME 153 (282)
T ss_dssp HHHHHHHHTTSCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCC-CBTT--GGGEEEECSCCGGGSC
T ss_pred HHHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCcccccccc-ccCC--CceEEeeCCcchhhcC
Confidence 46667777777889999999999999999999876 334799999987643222110 0011 12333332 444443
Q ss_pred cCCCccEEEEcchhhhcChhh-----HHHHHHHHHhccccC--cEEEEEeec
Q 035870 693 KANKYDRIISCEMIEAVGHEF-----MEEFFGCCESLLAED--GLLVLQFIS 737 (842)
Q Consensus 693 ~~~~fD~i~s~~~~~~~~~~~-----~~~~~~~~~~~Lkpg--G~~~~~~~~ 737 (842)
.+++|+|+|..+.. .+... ...+++-+.++|||| |.|++-.+.
T Consensus 154 -~~~~DvVLSDmApn-sG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~KvF~ 203 (282)
T 3gcz_A 154 -VIPGDTLLCDIGES-SPSIAVEEQRTLRVLNCAKQWLQEGNYTEFCIKVLC 203 (282)
T ss_dssp -CCCCSEEEECCCCC-CSCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEESC
T ss_pred -CCCcCEEEecCccC-CCChHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEec
Confidence 47899999976544 33321 123477778999999 999997655
No 449
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=98.23 E-value=1.6e-06 Score=101.50 Aligned_cols=60 Identities=25% Similarity=0.334 Sum_probs=46.0
Q ss_pred cEEEECCChHHHHHHHHHHh-----CCCeEEEEecCCCCCCCceeEeeCCeeeecceEeecCCCchhHHHHHHHcCCCcc
Q 035870 2 RVAVIGAGISGLVSAYVLAK-----AGVEVVLYEKDDYLGGHAKTVTFDGVDLDLGFMVFNRVTYPNMMEFFESLGVDME 76 (842)
Q Consensus 2 dV~IIGaGiaGLsaA~~L~~-----~G~~V~VlEa~~~~GG~~~s~~~~g~~~d~G~~~~~~~~~~~~~~l~~~lGl~~~ 76 (842)
||+|||||++||++|..|++ .|++|+|+|+.+...-. | .+.. ..++..++++++|+...
T Consensus 10 dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~~~~~~-------g-----ra~~----l~~~tle~l~~lGl~~~ 73 (665)
T 1pn0_A 10 DVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRSTKVYN-------G-----QADG----LQCRTLESLKNLGLADK 73 (665)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSSCCCS-------C-----SCCE----ECHHHHHHHHTTTCHHH
T ss_pred cEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCCCCCCC-------C-----ceeE----EChHHHHHHHHCCCHHH
Confidence 79999999999999999999 99999999997643210 0 0111 24577899999998655
Q ss_pred c
Q 035870 77 M 77 (842)
Q Consensus 77 ~ 77 (842)
.
T Consensus 74 l 74 (665)
T 1pn0_A 74 I 74 (665)
T ss_dssp H
T ss_pred H
Confidence 4
No 450
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.19 E-value=4.4e-06 Score=93.33 Aligned_cols=53 Identities=9% Similarity=0.096 Sum_probs=42.6
Q ss_pred hHHHHHHHHHhhhcCceEEeCCCeeEEEeCCCcEEEEeCCCcEEeCCEEEEccCh
Q 035870 215 HSYVNKVRKQLESWGCQIRTSSEVCSVLPADKGCTIVCGDGSREFYNSCVMALHA 269 (842)
Q Consensus 215 ~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VV~A~p~ 269 (842)
..+.+.+.+.+++. +++++++.|++|..++ ++.+...+|+++.||.||+|+..
T Consensus 190 ~~~~~~l~~~l~~~-v~i~~~~~v~~i~~~~-~v~~v~~~g~~i~~D~Vv~a~G~ 242 (449)
T 3kd9_A 190 KEVTDILEEKLKKH-VNLRLQEITMKIEGEE-RVEKVVTDAGEYKAELVILATGI 242 (449)
T ss_dssp HHHHHHHHHHHTTT-SEEEESCCEEEEECSS-SCCEEEETTEEEECSEEEECSCE
T ss_pred HHHHHHHHHHHHhC-cEEEeCCeEEEEeccC-cEEEEEeCCCEEECCEEEEeeCC
Confidence 46778888888888 9999999999998765 55333456778999999999864
No 451
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=98.18 E-value=4.7e-06 Score=85.25 Aligned_cols=120 Identities=8% Similarity=0.007 Sum_probs=89.5
Q ss_pred HHHHHHHHHHHHcC-CCCCCeEEEeccCchHHHHHHHHh------cCCEEEEEcCCHH----------------------
Q 035870 613 AQMRKVSLLIEKAR-VSKGQEVLEIGCGWGTLAIEIVKR------TGCKYTGITLSEE---------------------- 663 (842)
Q Consensus 613 aq~~~~~~l~~~l~-~~~~~~vLDiGcG~G~~~~~la~~------~~~~v~gid~s~~---------------------- 663 (842)
.+...+..+++.+. .....+|||+||..|..++.+++. ++.+|+++|..+.
T Consensus 89 ~r~~~L~~l~~~v~~~~~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~ 168 (282)
T 2wk1_A 89 KRLENIRQCVEDVIGNNVPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNS 168 (282)
T ss_dssp HHHHHHHHHHHHHHHTTCCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHH
T ss_pred HHHHHHHHHHHHHHhcCCCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccc
Confidence 33445555555543 233459999999999999988765 2678999996421
Q ss_pred ----HHHHHHHHHHHcCCC-CCeEEEEccccCC-c--cCCCccEEEEcchhhhcChhhHHHHHHHHHhccccCcEEEEEe
Q 035870 664 ----QLKYAEMKVKEAGLQ-DLIRLYLCDYRQL-A--KANKYDRIISCEMIEAVGHEFMEEFFGCCESLLAEDGLLVLQF 735 (842)
Q Consensus 664 ----~~~~a~~~~~~~~l~-~~v~~~~~d~~~~-~--~~~~fD~i~s~~~~~~~~~~~~~~~~~~~~~~LkpgG~~~~~~ 735 (842)
.++.+++++++.|+. ++|+++.+|+.+. + +.++||+|..-.-.. +....+|+.+...|+|||.+++.+
T Consensus 169 ~~~~~~~~ar~n~~~~gl~~~~I~li~Gda~etL~~~~~~~~d~vfIDaD~y----~~~~~~Le~~~p~L~pGGiIv~DD 244 (282)
T 2wk1_A 169 VLAVSEEEVRRNFRNYDLLDEQVRFLPGWFKDTLPTAPIDTLAVLRMDGDLY----ESTWDTLTNLYPKVSVGGYVIVDD 244 (282)
T ss_dssp HHCCCHHHHHHHHHHTTCCSTTEEEEESCHHHHSTTCCCCCEEEEEECCCSH----HHHHHHHHHHGGGEEEEEEEEESS
T ss_pred cchhHHHHHHHHHHHcCCCcCceEEEEeCHHHHHhhCCCCCEEEEEEcCCcc----ccHHHHHHHHHhhcCCCEEEEEcC
Confidence 467799999999994 7999999998653 3 346899999865321 225688999999999999999966
Q ss_pred e
Q 035870 736 I 736 (842)
Q Consensus 736 ~ 736 (842)
+
T Consensus 245 ~ 245 (282)
T 2wk1_A 245 Y 245 (282)
T ss_dssp C
T ss_pred C
Confidence 4
No 452
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.16 E-value=3.3e-06 Score=94.30 Aligned_cols=36 Identities=31% Similarity=0.540 Sum_probs=33.1
Q ss_pred CcEEEECCChHHHHHHHHHHhC--CCeEEEEecCCCCC
Q 035870 1 MRVAVIGAGISGLVSAYVLAKA--GVEVVLYEKDDYLG 36 (842)
Q Consensus 1 kdV~IIGaGiaGLsaA~~L~~~--G~~V~VlEa~~~~G 36 (842)
|||+|||||++||+||..|++. |.+|+|+|+++.+|
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~ 38 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFIS 38 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCccC
Confidence 7999999999999999999997 99999999977643
No 453
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=98.15 E-value=4e-06 Score=97.33 Aligned_cols=56 Identities=16% Similarity=0.004 Sum_probs=43.1
Q ss_pred hHHHHHHHHHhhhc--CceEEeCCCeeEEEeCCC---cE-EEEe---CCCc--EEeCCEEEEccChH
Q 035870 215 HSYVNKVRKQLESW--GCQIRTSSEVCSVLPADK---GC-TIVC---GDGS--REFYNSCVMALHAP 270 (842)
Q Consensus 215 ~~l~~~L~~~l~~~--G~~i~~~~~V~~I~~~~~---~v-~V~~---~~G~--~~~ad~VV~A~p~~ 270 (842)
..+...|.+.+++. |++|+.++.|++|..+++ ++ .|.. .+|+ ++.|+.||+|+...
T Consensus 166 ~~i~~~L~~~a~~~~~gV~i~~~~~v~dLi~~~~~~g~v~Gv~~~~~~~g~~~~i~Ak~VVLATGG~ 232 (662)
T 3gyx_A 166 ESYKVIVAEAAKNALGQDRIIERIFIVKLLLDKNTPNRIAGAVGFNLRANEVHIFKANAMVVACGGA 232 (662)
T ss_dssp TSHHHHHHHHHHHHHCTTTEECSEEECCCEECSSSTTBEEEEEEEESSSSCEEEEECSEEEECCCCB
T ss_pred HHHHHHHHHHHHhcCCCcEEEEceEEEEEEEeCCccceEEEEEEEEcCCCcEEEEEeCEEEECCCcc
Confidence 35777888888877 999999999999988776 54 3322 4554 58999999998754
No 454
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=98.14 E-value=3.2e-06 Score=89.13 Aligned_cols=109 Identities=21% Similarity=0.249 Sum_probs=82.6
Q ss_pred CCCCeEEEeccCchHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHHc---CC----CCCeEEEEccccCCc-----cCC
Q 035870 628 SKGQEVLEIGCGWGTLAIEIVKRTGCKYTGITLSEEQLKYAEMKVKEA---GL----QDLIRLYLCDYRQLA-----KAN 695 (842)
Q Consensus 628 ~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~---~l----~~~v~~~~~d~~~~~-----~~~ 695 (842)
.+..+||-||.|.|+.+..+.+.+..+|+.+||+++.++.+++.+... .+ .++++++.+|..+.- ..+
T Consensus 204 ~~pkrVLIIGgGdG~~~revlkh~~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~~~ 283 (381)
T 3c6k_A 204 YTGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGR 283 (381)
T ss_dssp CTTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTC
T ss_pred CCCCeEEEECCCcHHHHHHHHhcCCceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhccC
Confidence 456899999999999999999886679999999999999999875321 11 136899999976543 346
Q ss_pred CccEEEEcchh-------hhcC-hhhHHHHHHHHHhccccCcEEEEEee
Q 035870 696 KYDRIISCEMI-------EAVG-HEFMEEFFGCCESLLAEDGLLVLQFI 736 (842)
Q Consensus 696 ~fD~i~s~~~~-------~~~~-~~~~~~~~~~~~~~LkpgG~~~~~~~ 736 (842)
+||+|+.-..- .... .....++++.+++.|+|||.++.+.-
T Consensus 284 ~yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q~~ 332 (381)
T 3c6k_A 284 EFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGN 332 (381)
T ss_dssp CEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred ceeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEEecC
Confidence 89999985211 1111 12347889999999999999998753
No 455
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.13 E-value=3.9e-06 Score=94.52 Aligned_cols=41 Identities=17% Similarity=0.097 Sum_probs=35.1
Q ss_pred CceEEeCCCeeEEEeCCCcEEEEe-CCCc--EEeCCEEEEccCh
Q 035870 229 GCQIRTSSEVCSVLPADKGCTIVC-GDGS--REFYNSCVMALHA 269 (842)
Q Consensus 229 G~~i~~~~~V~~I~~~~~~v~V~~-~~G~--~~~ad~VV~A~p~ 269 (842)
|++++++++|+.|+.+++.+.+.. .+|+ ++.+|+||+|+..
T Consensus 107 gv~~~~~~~v~~i~~~~~~v~v~~~~~g~~~~~~~d~lviAtG~ 150 (480)
T 3cgb_A 107 GIDAKVRHEVTKVDTEKKIVYAEHTKTKDVFEFSYDRLLIATGV 150 (480)
T ss_dssp CCEEESSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCE
T ss_pred CCEEEeCCEEEEEECCCCEEEEEEcCCCceEEEEcCEEEECCCC
Confidence 889999999999998888888876 5576 7999999999864
No 456
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=98.11 E-value=1.7e-05 Score=89.77 Aligned_cols=55 Identities=16% Similarity=0.237 Sum_probs=50.7
Q ss_pred hhHHHHHHHHHhhhcCceEEeCCCeeEEEeCCCcEEEEeCCCcEEeCCEEEEccC
Q 035870 214 SHSYVNKVRKQLESWGCQIRTSSEVCSVLPADKGCTIVCGDGSREFYNSCVMALH 268 (842)
Q Consensus 214 ~~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VV~A~p 268 (842)
-..+.+.+.+.++++|+++++++.|+++...++++.|.+.+++++.+|.|++|+.
T Consensus 262 D~ei~~~l~~~l~~~gi~~~~~~~v~~~~~~~~~~~v~~~~~~~~~~D~vLvAvG 316 (542)
T 4b1b_A 262 DQQCAVKVKLYMEEQGVMFKNGILPKKLTKMDDKILVEFSDKTSELYDTVLYAIG 316 (542)
T ss_dssp CHHHHHHHHHHHHHTTCEEEETCCEEEEEEETTEEEEEETTSCEEEESEEEECSC
T ss_pred chhHHHHHHHHHHhhcceeecceEEEEEEecCCeEEEEEcCCCeEEEEEEEEccc
Confidence 4578889999999999999999999999999999999999998999999999985
No 457
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=98.10 E-value=1.1e-06 Score=94.92 Aligned_cols=179 Identities=13% Similarity=0.047 Sum_probs=90.9
Q ss_pred hhHHHHHHHHHhhhcCceEEeCCCeeEEEeCCCcEEEEeCCCcEEeCCEEEEccChHHHHHhhcCCCChHHHHhccccce
Q 035870 214 SHSYVNKVRKQLESWGCQIRTSSEVCSVLPADKGCTIVCGDGSREFYNSCVMALHAPDALKILGNQATFDETRILGAFQY 293 (842)
Q Consensus 214 ~~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VV~A~p~~~~~~ll~~~~~~~~~~~l~~~~~ 293 (842)
...++..|.+.++++|++|+. ++|++|+..+ .+.||.||+|+..+.. .+++. .+.
T Consensus 141 p~~~~~~l~~~~~~~Gv~i~~-~~V~~i~~~~-----------~~~a~~VV~A~G~~s~-~l~~~------------~~l 195 (351)
T 3g3e_A 141 GKNYLQWLTERLTERGVKFFQ-RKVESFEEVA-----------REGADVIVNCTGVWAG-ALQRD------------PLL 195 (351)
T ss_dssp HHHHHHHHHHHHHHTTCEEEE-CCCCCHHHHH-----------HTTCSEEEECCGGGGG-GTSCC------------TTC
T ss_pred HHHHHHHHHHHHHHCCCEEEE-EEeCCHHHhh-----------cCCCCEEEECCCcChH-hhcCC------------Cce
Confidence 458999999999999999998 9998885432 2679999999988743 33332 122
Q ss_pred eece-EEEecCCCC-----cCCCCC-CcceeeecccCCCceEEEEEc--ccccC-CCC----CCCCeEEecCCCCCCcce
Q 035870 294 VYSD-IFLHRDKRF-----MPQNPA-AWSAWNFLESFDSKVCLTYWL--NVLQN-LGE----TSLPFLVTLNPDHVPEHT 359 (842)
Q Consensus 294 ~~~~-v~l~~~~~~-----~p~~~~-~~~~~~~~~~~~~~~~v~~~~--~~l~~-l~~----~~~~~~~~l~~~~~~~~~ 359 (842)
.+.+ -++.++.+. ++.... .-....|.....+...+.... +.... ... .+.+.+..+.|......+
T Consensus 196 ~p~rg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~p~~~~~~iGg~~~~~~~~~~~~~~~~~~l~~~~~~~~P~l~~~~i 275 (351)
T 3g3e_A 196 QPGRGQIMKVDAPWMKHFILTHDPERGIYNSPYIIPGTQTVTLGGIFQLGNWSELNNIQDHNTIWEGCCRLEPTLKNARI 275 (351)
T ss_dssp EEEEEEEEEEECTTCCSEEEECCTTTCTTCSCEEEECSSCEEEECCCEETCCCCSCCHHHHHHHHHHHHHHCGGGGGCEE
T ss_pred eecCCcEEEEeCCCcceEEEeccccCCCCceeEEEeCCCcEEEeeeeecCCCCCCCCHHHHHHHHHHHHHhCCCccCCcE
Confidence 2211 111122111 100000 000011221112233332111 00000 000 001111223333233346
Q ss_pred eEEEEcCCCCCCHHHHHHHHhhhhhcCCCCeEEeccccCCCCCchhHhHHHHHHHHhcCC
Q 035870 360 LLKWSTGHPVPSVAASKASLELDHIQGKRGIWFCGAYQGYGFHEDGLKAGMTAAHGVLGK 419 (842)
Q Consensus 360 ~~~w~~~~p~~~~~~~~~~~~~~~~~~~~~l~~aG~~~g~G~~e~A~~SG~~aA~~Il~~ 419 (842)
...|...+|.-. ..+-..+.+......+|+|++.+|.|.|+ ..|...|+.+|+.|.+.
T Consensus 276 ~~~w~G~r~~t~-D~p~~~~~ig~~~~~~~~~~~~G~~g~G~-~~ap~~g~~la~li~~~ 333 (351)
T 3g3e_A 276 IGERTGFRPVRP-QIRLEREQLRTGPSNTEVIHNYGHGGYGL-TIHWGCALEAAKLFGRI 333 (351)
T ss_dssp EEEEEEEEEECS-SCEEEEEEECCSSSCEEEEEEECCTTCHH-HHHHHHHHHHHHHHHHH
T ss_pred eeeeEeeCCCCC-CccceeeeccCCCCCCeEEEEeCCCcchH-hhhHHHHHHHHHHHHHH
Confidence 667876555321 10000001122233579999999999999 89999999999999764
No 458
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=98.08 E-value=2e-06 Score=91.01 Aligned_cols=38 Identities=32% Similarity=0.594 Sum_probs=34.9
Q ss_pred cEEEECCChHHHHHHHHHHhCCCeEEEEecCCCCCCCce
Q 035870 2 RVAVIGAGISGLVSAYVLAKAGVEVVLYEKDDYLGGHAK 40 (842)
Q Consensus 2 dV~IIGaGiaGLsaA~~L~~~G~~V~VlEa~~~~GG~~~ 40 (842)
||+|||||+|||+||.+|++.|++|+|+|+ +.+||.+.
T Consensus 8 DvvIIG~GpAGl~aA~~l~~~g~~V~liE~-~~~gG~~~ 45 (312)
T 4gcm_A 8 DIAIIGAGPAGMTAAVYASRANLKTVMIER-GIPGGQMA 45 (312)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEES-SCTTGGGG
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEec-CCCCCeee
Confidence 799999999999999999999999999998 56788664
No 459
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=98.06 E-value=1.1e-05 Score=89.49 Aligned_cols=50 Identities=14% Similarity=0.221 Sum_probs=42.4
Q ss_pred hHHHHHHHHHhhhcCceEEeCCCeeEEEeCCCcEEEEeCCCcEEeCCEEEEccC
Q 035870 215 HSYVNKVRKQLESWGCQIRTSSEVCSVLPADKGCTIVCGDGSREFYNSCVMALH 268 (842)
Q Consensus 215 ~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VV~A~p 268 (842)
..+.+.+.+.++++|++++++++|++++. + .|++++|+++.+|.||+|+.
T Consensus 188 ~~~~~~~~~~l~~~gV~i~~~~~v~~~~~--~--~v~~~~g~~~~~D~vl~a~G 237 (437)
T 4eqs_A 188 ADMNQPILDELDKREIPYRLNEEINAING--N--EITFKSGKVEHYDMIIEGVG 237 (437)
T ss_dssp GGGGHHHHHHHHHTTCCEEESCCEEEEET--T--EEEETTSCEEECSEEEECCC
T ss_pred chhHHHHHHHhhccceEEEeccEEEEecC--C--eeeecCCeEEeeeeEEEEec
Confidence 45677788888889999999999999853 2 47778999999999999986
No 460
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=98.04 E-value=1.2e-05 Score=71.72 Aligned_cols=97 Identities=13% Similarity=0.059 Sum_probs=67.5
Q ss_pred HHHHHHHHcCCCCCCeEEEeccCch-HHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCccC-
Q 035870 617 KVSLLIEKARVSKGQEVLEIGCGWG-TLAIEIVKRTGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLAKA- 694 (842)
Q Consensus 617 ~~~~l~~~l~~~~~~~vLDiGcG~G-~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~- 694 (842)
..+.+.+.. .++.+|||||||.| ..+..|+++.+++|+++|+|+..++ +++.|+.+...+
T Consensus 25 LaeYI~~~~--~~~~rVlEVG~G~g~~vA~~La~~~g~~V~atDInp~Av~----------------~v~dDiF~P~~~~ 86 (153)
T 2k4m_A 25 LAVYIIRCS--GPGTRVVEVGAGRFLYVSDYIRKHSKVDLVLTDIKPSHGG----------------IVRDDITSPRMEI 86 (153)
T ss_dssp HHHHHHHHS--CSSSEEEEETCTTCCHHHHHHHHHSCCEEEEECSSCSSTT----------------EECCCSSSCCHHH
T ss_pred HHHHHHhcC--CCCCcEEEEccCCChHHHHHHHHhCCCeEEEEECCccccc----------------eEEccCCCCcccc
Confidence 334444443 45679999999999 6999999855999999999997665 788888775522
Q ss_pred -CCccEEEEcchhhhcChhhHHHHHHHHHhccccCcEEEEEeecC
Q 035870 695 -NKYDRIISCEMIEAVGHEFMEEFFGCCESLLAEDGLLVLQFISI 738 (842)
Q Consensus 695 -~~fD~i~s~~~~~~~~~~~~~~~~~~~~~~LkpgG~~~~~~~~~ 738 (842)
+.||+|.++.. +.| +...+.++.+. -|.-++|...+.
T Consensus 87 Y~~~DLIYsirP----P~E-l~~~i~~lA~~--v~adliI~pL~~ 124 (153)
T 2k4m_A 87 YRGAALIYSIRP----PAE-IHSSLMRVADA--VGARLIIKPLTG 124 (153)
T ss_dssp HTTEEEEEEESC----CTT-THHHHHHHHHH--HTCEEEEECBTT
T ss_pred cCCcCEEEEcCC----CHH-HHHHHHHHHHH--cCCCEEEEcCCC
Confidence 58999988643 222 34444444442 366788765543
No 461
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=98.02 E-value=1.2e-05 Score=89.46 Aligned_cols=33 Identities=36% Similarity=0.687 Sum_probs=31.1
Q ss_pred CcEEEECCChHHHHHHHHHHh---CCCeEEEEecCC
Q 035870 1 MRVAVIGAGISGLVSAYVLAK---AGVEVVLYEKDD 33 (842)
Q Consensus 1 kdV~IIGaGiaGLsaA~~L~~---~G~~V~VlEa~~ 33 (842)
|||+|||||++||+||+.|++ .|++|+|+|+++
T Consensus 5 ~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~ 40 (437)
T 3sx6_A 5 AHVVILGAGTGGMPAAYEMKEALGSGHEVTLISAND 40 (437)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSS
T ss_pred CcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCC
Confidence 589999999999999999999 899999999966
No 462
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.02 E-value=4.9e-06 Score=94.04 Aligned_cols=36 Identities=17% Similarity=0.398 Sum_probs=32.6
Q ss_pred CcEEEECCChHHHHHHHHHHhCC---CeEEEEecCCCCC
Q 035870 1 MRVAVIGAGISGLVSAYVLAKAG---VEVVLYEKDDYLG 36 (842)
Q Consensus 1 kdV~IIGaGiaGLsaA~~L~~~G---~~V~VlEa~~~~G 36 (842)
+||+|||||++|++||..|++.| .+|+|+|+++.+|
T Consensus 36 ~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~ 74 (490)
T 2bc0_A 36 SKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSNIS 74 (490)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSCCS
T ss_pred CcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCCCC
Confidence 48999999999999999999988 9999999977543
No 463
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=98.01 E-value=4e-06 Score=90.88 Aligned_cols=37 Identities=38% Similarity=0.530 Sum_probs=33.4
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCeEEEEecCCCCCC
Q 035870 1 MRVAVIGAGISGLVSAYVLAKAGVEVVLYEKDDYLGG 37 (842)
Q Consensus 1 kdV~IIGaGiaGLsaA~~L~~~G~~V~VlEa~~~~GG 37 (842)
+||+|||||++|+++|++|+++|++|+|+|+....+|
T Consensus 7 ~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~~~~g 43 (363)
T 1c0p_A 7 KRVVVLGSGVIGLSSALILARKGYSVHILARDLPEDV 43 (363)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCTTCT
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCEEEEEeccCCCCc
Confidence 3899999999999999999999999999999775444
No 464
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=98.00 E-value=3e-06 Score=94.30 Aligned_cols=39 Identities=44% Similarity=0.673 Sum_probs=37.0
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCeEEEEecCCCCCCCc
Q 035870 1 MRVAVIGAGISGLVSAYVLAKAGVEVVLYEKDDYLGGHA 39 (842)
Q Consensus 1 kdV~IIGaGiaGLsaA~~L~~~G~~V~VlEa~~~~GG~~ 39 (842)
+||+|||||+|||+||+.|++.|++|+|+|+.+.+||..
T Consensus 123 ~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~~GG~l 161 (456)
T 2vdc_G 123 LSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDRMGGLL 161 (456)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSCSTHH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCCCCCee
Confidence 589999999999999999999999999999999999964
No 465
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=97.99 E-value=3.7e-05 Score=86.70 Aligned_cols=121 Identities=17% Similarity=0.179 Sum_probs=90.1
Q ss_pred HHHHHHHHHHcCCCCCCeEEEeccCchHHHHHHHHhc--------------CCEEEEEcCCHHHHHHHHHHHHHcCCCCC
Q 035870 615 MRKVSLLIEKARVSKGQEVLEIGCGWGTLAIEIVKRT--------------GCKYTGITLSEEQLKYAEMKVKEAGLQDL 680 (842)
Q Consensus 615 ~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~la~~~--------------~~~v~gid~s~~~~~~a~~~~~~~~l~~~ 680 (842)
+..++.|++.+...++.+|+|-.||+|++...+.+.. ...++|+|+++.+...|+-++--.|.. .
T Consensus 203 ~~Vv~lmv~l~~p~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~lhg~~-~ 281 (530)
T 3ufb_A 203 RPVVRFMVEVMDPQLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLHGLE-Y 281 (530)
T ss_dssp HHHHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHHHTCS-C
T ss_pred HHHHHHHHHhhccCCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHhcCCc-c
Confidence 4556778888888999999999999999998876531 246999999999999999988777765 4
Q ss_pred eEEEEccccCCc-----cCCCccEEEEcchhhhc-------------C-hhhHHHHHHHHHhccc-------cCcEEEEE
Q 035870 681 IRLYLCDYRQLA-----KANKYDRIISCEMIEAV-------------G-HEFMEEFFGCCESLLA-------EDGLLVLQ 734 (842)
Q Consensus 681 v~~~~~d~~~~~-----~~~~fD~i~s~~~~~~~-------------~-~~~~~~~~~~~~~~Lk-------pgG~~~~~ 734 (842)
..+..+|....+ ...+||+|++|..+.-- + .+.-..+++.+.+.|| |||++.+.
T Consensus 282 ~~I~~~dtL~~~~~~~~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~~~~~l~~gGr~avV 361 (530)
T 3ufb_A 282 PRIDPENSLRFPLREMGDKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETAMLFLQLIMRKLKRPGHGSDNGGRAAVV 361 (530)
T ss_dssp CEEECSCTTCSCGGGCCGGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCBHHHHHHHHHHHHBCCTTSSSSSCCEEEEE
T ss_pred ccccccccccCchhhhcccccceEEEecCCCCccccccccccCchhcccchhHHHHHHHHHHHhhhhhhccCCCceEEEE
Confidence 577888865443 34589999999876321 1 0112345677777776 79998875
Q ss_pred ee
Q 035870 735 FI 736 (842)
Q Consensus 735 ~~ 736 (842)
..
T Consensus 362 lP 363 (530)
T 3ufb_A 362 VP 363 (530)
T ss_dssp EE
T ss_pred ec
Confidence 43
No 466
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=97.98 E-value=3.4e-06 Score=89.23 Aligned_cols=32 Identities=28% Similarity=0.442 Sum_probs=30.8
Q ss_pred cEEEECCChHHHHHHHHHHhCCCeEEEEecCC
Q 035870 2 RVAVIGAGISGLVSAYVLAKAGVEVVLYEKDD 33 (842)
Q Consensus 2 dV~IIGaGiaGLsaA~~L~~~G~~V~VlEa~~ 33 (842)
||+|||||+|||+||.+|++.|++|+|+|+..
T Consensus 6 DvvIIG~GpAGl~AA~~la~~g~~v~liE~~~ 37 (314)
T 4a5l_A 6 DVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFM 37 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCCEEECCSS
T ss_pred cEEEECCCHHHHHHHHHHHHCCCCEEEEecCC
Confidence 89999999999999999999999999999965
No 467
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=97.98 E-value=9.4e-06 Score=91.73 Aligned_cols=36 Identities=17% Similarity=0.092 Sum_probs=29.4
Q ss_pred cEEEECCChHHHHHHHHHHhCCCeEEEEecCCCCCC
Q 035870 2 RVAVIGAGISGLVSAYVLAKAGVEVVLYEKDDYLGG 37 (842)
Q Consensus 2 dV~IIGaGiaGLsaA~~L~~~G~~V~VlEa~~~~GG 37 (842)
||||||||++||++|..|++.|...+++|+.+..|+
T Consensus 41 Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~ 76 (501)
T 4b63_A 41 DLLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQ 76 (501)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHCTTTCTTC----CC
T ss_pred cEEEEcccHHHHHHHHHHHhcCCCceEEeccccCCC
Confidence 799999999999999999999888888888777666
No 468
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=97.93 E-value=3.9e-05 Score=85.88 Aligned_cols=48 Identities=19% Similarity=0.299 Sum_probs=39.3
Q ss_pred HHHhhhcCceEEeCCCeeEEEeCCCcEEEEeC-C--Cc--EEeCCEEEEccCh
Q 035870 222 RKQLESWGCQIRTSSEVCSVLPADKGCTIVCG-D--GS--REFYNSCVMALHA 269 (842)
Q Consensus 222 ~~~l~~~G~~i~~~~~V~~I~~~~~~v~V~~~-~--G~--~~~ad~VV~A~p~ 269 (842)
.+.+++.|++|+++++|++|+.+++++.|++. + |+ ++.+|.||+|+..
T Consensus 217 ~~~l~~~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vv~a~G~ 269 (464)
T 2eq6_A 217 RRALEKEGIRVRTKTKAVGYEKKKDGLHVRLEPAEGGEGEEVVVDKVLVAVGR 269 (464)
T ss_dssp HHHHHHTTCEEECSEEEEEEEEETTEEEEEEEETTCCSCEEEEESEEEECSCE
T ss_pred HHHHHhcCCEEEcCCEEEEEEEeCCEEEEEEeecCCCceeEEEcCEEEECCCc
Confidence 34455569999999999999988777777775 6 76 7999999999864
No 469
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=97.92 E-value=2.3e-05 Score=78.13 Aligned_cols=119 Identities=14% Similarity=0.186 Sum_probs=82.3
Q ss_pred HHHHHHHHHcCCCCCCeEEEeccCchHHHHHHHHhcCC-EEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEc-cccCCcc
Q 035870 616 RKVSLLIEKARVSKGQEVLEIGCGWGTLAIEIVKRTGC-KYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLC-DYRQLAK 693 (842)
Q Consensus 616 ~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~-~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~-d~~~~~~ 693 (842)
.|+..+.++..++++.+||||||++|+++.+++...++ +|.|+|+-..-.+.-+ ..++.++. .|.+..+ |++.+++
T Consensus 81 ~KL~ei~~~~~l~~~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~~he~P~-~~~ql~w~-lV~~~~~~Dv~~l~~ 158 (321)
T 3lkz_A 81 AKLRWLVERRFLEPVGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGPGHEEPQ-LVQSYGWN-IVTMKSGVDVFYRPS 158 (321)
T ss_dssp HHHHHHHHTTSCCCCEEEEEETCTTCHHHHHHTTCTTEEEEEEECCCSTTSCCCC-CCCBTTGG-GEEEECSCCTTSSCC
T ss_pred HHHHHHHHhcCCCCCCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCCCccCcc-hhhhcCCc-ceEEEeccCHhhCCC
Confidence 46677777777899999999999999999988887555 5999999865211000 00112222 4888888 9888876
Q ss_pred CCCccEEEEcchhhhcChhh-----HHHHHHHHHhccccC-cEEEEEeecC
Q 035870 694 ANKYDRIISCEMIEAVGHEF-----MEEFFGCCESLLAED-GLLVLQFISI 738 (842)
Q Consensus 694 ~~~fD~i~s~~~~~~~~~~~-----~~~~~~~~~~~Lkpg-G~~~~~~~~~ 738 (842)
.++|.|+|--. +.-+... --..|+-+.+.|++| |-+++-.+..
T Consensus 159 -~~~D~ivcDig-eSs~~~~ve~~Rtl~vLel~~~wL~~~~~~f~~KVl~p 207 (321)
T 3lkz_A 159 -ECCDTLLCDIG-ESSSSAEVEEHRTIRVLEMVEDWLHRGPREFCVKVLCP 207 (321)
T ss_dssp -CCCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHTTCCCEEEEEESCT
T ss_pred -CCCCEEEEECc-cCCCChhhhhhHHHHHHHHHHHHhccCCCcEEEEEcCC
Confidence 67999998543 4443321 122566678889999 8999855543
No 470
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=97.91 E-value=5.7e-06 Score=90.27 Aligned_cols=35 Identities=43% Similarity=0.500 Sum_probs=33.3
Q ss_pred CcEEEECCChHHHHHHHHHHhC--CCeEEEEecCCCC
Q 035870 1 MRVAVIGAGISGLVSAYVLAKA--GVEVVLYEKDDYL 35 (842)
Q Consensus 1 kdV~IIGaGiaGLsaA~~L~~~--G~~V~VlEa~~~~ 35 (842)
|||+|||||++||++|+.|+++ |++|+|+|+++.+
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~ 37 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQ 37 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTT
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCC
Confidence 7999999999999999999999 9999999998776
No 471
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=97.89 E-value=8.2e-06 Score=78.35 Aligned_cols=117 Identities=16% Similarity=0.221 Sum_probs=81.6
Q ss_pred HHHHHHHHHcCCCCCCeEEEeccCchHHHHHHHHhcCC-EEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEc-cccCCcc
Q 035870 616 RKVSLLIEKARVSKGQEVLEIGCGWGTLAIEIVKRTGC-KYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLC-DYRQLAK 693 (842)
Q Consensus 616 ~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~-~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~-d~~~~~~ 693 (842)
.|+..+.++..++++++|||+||+.|+++.+++...+. +|.|+|+-..-.+.-+ ..+..|+. .|+|..+ |+..+++
T Consensus 65 ~KL~ei~ek~~l~~g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~ghe~P~-~~~s~gwn-~v~fk~gvDv~~~~~ 142 (267)
T 3p8z_A 65 AKLQWFVERNMVIPEGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPGHEEPV-PMSTYGWN-IVKLMSGKDVFYLPP 142 (267)
T ss_dssp HHHHHHHHTTSSCCCEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTTSCCCC-CCCCTTTT-SEEEECSCCGGGCCC
T ss_pred HHHHHHHHhcCCCCCCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCCccCcc-hhhhcCcC-ceEEEeccceeecCC
Confidence 46677777778899999999999999999999888554 6999999765332100 11233554 7999999 9877765
Q ss_pred CCCccEEEEcchhhhcChh-----hHHHHHHHHHhccccCcEEEEEeec
Q 035870 694 ANKYDRIISCEMIEAVGHE-----FMEEFFGCCESLLAEDGLLVLQFIS 737 (842)
Q Consensus 694 ~~~fD~i~s~~~~~~~~~~-----~~~~~~~~~~~~LkpgG~~~~~~~~ 737 (842)
.++|.|+|--. +.-+.. .--..|+-+.+.|++ |.+++-.+.
T Consensus 143 -~~~DtllcDIg-eSs~~~~vE~~RtlrvLela~~wL~~-~~fc~KVl~ 188 (267)
T 3p8z_A 143 -EKCDTLLCDIG-ESSPSPTVEESRTIRVLKMVEPWLKN-NQFCIKVLN 188 (267)
T ss_dssp -CCCSEEEECCC-CCCSCHHHHHHHHHHHHHHHGGGCSS-CEEEEEESC
T ss_pred -ccccEEEEecC-CCCCChhhhhhHHHHHHHHHHHhccc-CCEEEEEcc
Confidence 67999999421 111211 112367777899999 788885543
No 472
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=97.86 E-value=4.8e-06 Score=88.05 Aligned_cols=40 Identities=33% Similarity=0.647 Sum_probs=36.4
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCeEEE-EecCCCCCCCcee
Q 035870 1 MRVAVIGAGISGLVSAYVLAKAGVEVVL-YEKDDYLGGHAKT 41 (842)
Q Consensus 1 kdV~IIGaGiaGLsaA~~L~~~G~~V~V-lEa~~~~GG~~~s 41 (842)
+||+|||||++||+||+.|++.|++|+| +|+ +.+||.+..
T Consensus 5 ~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~-~~~gG~~~~ 45 (315)
T 3r9u_A 5 LDVAIIGGGPAGLSAGLYATRGGLKNVVMFEK-GMPGGQITS 45 (315)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHTCSCEEEECS-SSTTGGGGG
T ss_pred ceEEEECCCHHHHHHHHHHHHCCCCeEEEEeC-CCCCceeee
Confidence 4899999999999999999999999999 999 778987643
No 473
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=97.83 E-value=8.7e-06 Score=95.94 Aligned_cols=41 Identities=46% Similarity=0.615 Sum_probs=38.3
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCeEEEEecCCCCCCCcee
Q 035870 1 MRVAVIGAGISGLVSAYVLAKAGVEVVLYEKDDYLGGHAKT 41 (842)
Q Consensus 1 kdV~IIGaGiaGLsaA~~L~~~G~~V~VlEa~~~~GG~~~s 41 (842)
+||+|||||++||+||+.|++.|++|+|+|+++.+||.+..
T Consensus 392 ~~VvIIGgG~AGl~aA~~La~~G~~V~liE~~~~~GG~~~~ 432 (690)
T 3k30_A 392 ARVLVVGAGPSGLEAARALGVRGYDVVLAEAGRDLGGRVTQ 432 (690)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCTHHHH
T ss_pred ceEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCEeee
Confidence 58999999999999999999999999999999999997653
No 474
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=97.81 E-value=7.9e-06 Score=91.69 Aligned_cols=39 Identities=41% Similarity=0.570 Sum_probs=36.9
Q ss_pred cEEEECCChHHHHHHHHHHhCCCeEEEEecCCCCCCCce
Q 035870 2 RVAVIGAGISGLVSAYVLAKAGVEVVLYEKDDYLGGHAK 40 (842)
Q Consensus 2 dV~IIGaGiaGLsaA~~L~~~G~~V~VlEa~~~~GG~~~ 40 (842)
||+|||||++||+||..|++.|++|+|+|+++.+||.+.
T Consensus 6 DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~~GG~~~ 44 (466)
T 3l8k_A 6 DVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGELGGNCL 44 (466)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECTTSSSSHHHH
T ss_pred eEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCccc
Confidence 799999999999999999999999999999999999654
No 475
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=97.79 E-value=1.3e-05 Score=94.78 Aligned_cols=41 Identities=37% Similarity=0.548 Sum_probs=38.4
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCeEEEEecCCCCCCCcee
Q 035870 1 MRVAVIGAGISGLVSAYVLAKAGVEVVLYEKDDYLGGHAKT 41 (842)
Q Consensus 1 kdV~IIGaGiaGLsaA~~L~~~G~~V~VlEa~~~~GG~~~s 41 (842)
|||+|||||++||+||+.|++.|++|+|+|+++.+||.+..
T Consensus 390 ~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~~~~~GG~~~~ 430 (729)
T 1o94_A 390 DSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEKIGGHLNQ 430 (729)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTHHH
T ss_pred ceEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCeeee
Confidence 58999999999999999999999999999999999997653
No 476
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=97.79 E-value=1.2e-05 Score=89.27 Aligned_cols=33 Identities=30% Similarity=0.609 Sum_probs=31.4
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCeEEEEecCC
Q 035870 1 MRVAVIGAGISGLVSAYVLAKAGVEVVLYEKDD 33 (842)
Q Consensus 1 kdV~IIGaGiaGLsaA~~L~~~G~~V~VlEa~~ 33 (842)
+||+|||||++||++|+.|+++|++|+|+|++.
T Consensus 23 ~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 23 KRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 489999999999999999999999999999976
No 477
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=97.78 E-value=8.1e-05 Score=83.73 Aligned_cols=35 Identities=31% Similarity=0.507 Sum_probs=32.1
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCeEEEEecCCCC
Q 035870 1 MRVAVIGAGISGLVSAYVLAKAGVEVVLYEKDDYL 35 (842)
Q Consensus 1 kdV~IIGaGiaGLsaA~~L~~~G~~V~VlEa~~~~ 35 (842)
|+|+|||||.+|+-+|..|++.|.+|+|+|+.+++
T Consensus 184 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~ 218 (478)
T 1v59_A 184 KRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQI 218 (478)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred ceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcc
Confidence 57999999999999999999999999999986653
No 478
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=97.78 E-value=0.00019 Score=78.85 Aligned_cols=45 Identities=18% Similarity=0.280 Sum_probs=36.7
Q ss_pred HHHHhhhcCceEEeCCCeeEEEeCCCcEEEEeCCCcEEeCCEEEEccCh
Q 035870 221 VRKQLESWGCQIRTSSEVCSVLPADKGCTIVCGDGSREFYNSCVMALHA 269 (842)
Q Consensus 221 L~~~l~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VV~A~p~ 269 (842)
+.+.++++|++|+++++|++|+ + + .|++.+|+++.||.||+|++.
T Consensus 193 l~~~l~~~GV~i~~~~~v~~i~-~-~--~v~~~~g~~i~~D~vi~a~G~ 237 (408)
T 2gqw_A 193 VARYHAAQGVDLRFERSVTGSV-D-G--VVLLDDGTRIAADMVVVGIGV 237 (408)
T ss_dssp HHHHHHHTTCEEEESCCEEEEE-T-T--EEEETTSCEEECSEEEECSCE
T ss_pred HHHHHHHcCcEEEeCCEEEEEE-C-C--EEEECCCCEEEcCEEEECcCC
Confidence 3345556699999999999998 3 3 677889989999999999864
No 479
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=97.77 E-value=1.8e-05 Score=79.55 Aligned_cols=118 Identities=14% Similarity=0.197 Sum_probs=73.3
Q ss_pred HHHHHHHHHcCCCCCCeEEEeccCchHHHHHHHHhcC-CEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEc-cccCCcc
Q 035870 616 RKVSLLIEKARVSKGQEVLEIGCGWGTLAIEIVKRTG-CKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLC-DYRQLAK 693 (842)
Q Consensus 616 ~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~-~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~-d~~~~~~ 693 (842)
.|+..+.++--++++.+|||+||++|+++..++++.+ ..|+|+|++..+...... ....+. +-+.+... |+..+.
T Consensus 68 ~KL~ei~ek~l~~~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~~~~~P~~-~~~~~~-~iv~~~~~~di~~l~- 144 (300)
T 3eld_A 68 AKIRWLHERGYLRITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIEGHEKPIH-MQTLGW-NIVKFKDKSNVFTMP- 144 (300)
T ss_dssp HHHHHHHHHTSCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCC-CCBTTG-GGEEEECSCCTTTSC-
T ss_pred HHHHHHHHhCCCCCCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEecccccccccc-ccccCC-ceEEeecCceeeecC-
Confidence 3555666662257899999999999999999997633 479999997543111000 000010 11223222 344443
Q ss_pred CCCccEEEEcchhhhcChhhH-----HHHHHHHHhccccC-cEEEEEeec
Q 035870 694 ANKYDRIISCEMIEAVGHEFM-----EEFFGCCESLLAED-GLLVLQFIS 737 (842)
Q Consensus 694 ~~~fD~i~s~~~~~~~~~~~~-----~~~~~~~~~~Lkpg-G~~~~~~~~ 737 (842)
.+.+|+|+|..+-. .+.... ..+++-+.++|+|| |.|++-.+.
T Consensus 145 ~~~~DlVlsD~APn-sG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~KvF~ 193 (300)
T 3eld_A 145 TEPSDTLLCDIGES-SSNPLVERDRTMKVLENFERWKHVNTENFCVKVLA 193 (300)
T ss_dssp CCCCSEEEECCCCC-CSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEEESS
T ss_pred CCCcCEEeecCcCC-CCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEEecc
Confidence 46899999965544 333211 23477778999999 999997665
No 480
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=97.76 E-value=0.00011 Score=81.81 Aligned_cols=35 Identities=37% Similarity=0.449 Sum_probs=32.1
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCeEEEEecCCCC
Q 035870 1 MRVAVIGAGISGLVSAYVLAKAGVEVVLYEKDDYL 35 (842)
Q Consensus 1 kdV~IIGaGiaGLsaA~~L~~~G~~V~VlEa~~~~ 35 (842)
++|+|||||++|+.+|..|++.|.+|+|+|+.+++
T Consensus 150 ~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~ 184 (447)
T 1nhp_A 150 NNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRP 184 (447)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSST
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCeEEEEecCccc
Confidence 58999999999999999999999999999986653
No 481
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=97.76 E-value=2.2e-05 Score=82.99 Aligned_cols=40 Identities=38% Similarity=0.505 Sum_probs=36.1
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCeEEEEecCCCCCCCce
Q 035870 1 MRVAVIGAGISGLVSAYVLAKAGVEVVLYEKDDYLGGHAK 40 (842)
Q Consensus 1 kdV~IIGaGiaGLsaA~~L~~~G~~V~VlEa~~~~GG~~~ 40 (842)
|||+|||||++|+.||+.|++.|++|+|+|++...+.-++
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~~~~tp~h 41 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRPKRMTPAH 41 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTTSCCSSC
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccCCcCCccc
Confidence 5999999999999999999999999999999887666544
No 482
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.75 E-value=0.00011 Score=82.13 Aligned_cols=48 Identities=13% Similarity=0.172 Sum_probs=38.0
Q ss_pred HHHhhhcCceEEeCCCeeEEEeCCCcEEEEeC---CCcEEeCCEEEEccCh
Q 035870 222 RKQLESWGCQIRTSSEVCSVLPADKGCTIVCG---DGSREFYNSCVMALHA 269 (842)
Q Consensus 222 ~~~l~~~G~~i~~~~~V~~I~~~~~~v~V~~~---~G~~~~ad~VV~A~p~ 269 (842)
.+.+++.|++|+++++|++|+.+++++.|++. +++++.+|.||+|++.
T Consensus 218 ~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~g~~~~~~~D~vv~a~G~ 268 (455)
T 1ebd_A 218 KKRLKKKGVEVVTNALAKGAEEREDGVTVTYEANGETKTIDADYVLVTVGR 268 (455)
T ss_dssp HHHHHHTTCEEEESEEEEEEEEETTEEEEEEEETTEEEEEEESEEEECSCE
T ss_pred HHHHHHCCCEEEeCCEEEEEEEeCCeEEEEEEeCCceeEEEcCEEEECcCC
Confidence 34455569999999999999987777777654 4567999999999864
No 483
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=97.72 E-value=8.6e-05 Score=77.94 Aligned_cols=87 Identities=9% Similarity=0.097 Sum_probs=64.2
Q ss_pred CCCCCeEEEeccCchHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHHcCCCCCeEEEEccccCCc-cCCCccEEEEcch
Q 035870 627 VSKGQEVLEIGCGWGTLAIEIVKRTGCKYTGITLSEEQLKYAEMKVKEAGLQDLIRLYLCDYRQLA-KANKYDRIISCEM 705 (842)
Q Consensus 627 ~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~-~~~~fD~i~s~~~ 705 (842)
+++|+++||+||..|+++..++++ +.+|++||+.+ +-. .+... ++|+++++|..... +.++||.|+|-..
T Consensus 209 l~~G~~vlDLGAaPGGWT~~l~~r-g~~V~aVD~~~-l~~----~l~~~---~~V~~~~~d~~~~~~~~~~~D~vvsDm~ 279 (375)
T 4auk_A 209 LANGMWAVDLGACPGGWTYQLVKR-NMWVYSVDNGP-MAQ----SLMDT---GQVTWLREDGFKFRPTRSNISWMVCDMV 279 (375)
T ss_dssp SCTTCEEEEETCTTCHHHHHHHHT-TCEEEEECSSC-CCH----HHHTT---TCEEEECSCTTTCCCCSSCEEEEEECCS
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHC-CCEEEEEEhhh-cCh----hhccC---CCeEEEeCccccccCCCCCcCEEEEcCC
Confidence 579999999999999999999998 88999999874 211 12222 38999999988876 5578999999543
Q ss_pred hhhcChhhHHHHHHHHHhccccC
Q 035870 706 IEAVGHEFMEEFFGCCESLLAED 728 (842)
Q Consensus 706 ~~~~~~~~~~~~~~~~~~~Lkpg 728 (842)
.. +......+.+.|..+
T Consensus 280 ~~------p~~~~~l~~~wl~~~ 296 (375)
T 4auk_A 280 EK------PAKVAALMAQWLVNG 296 (375)
T ss_dssp SC------HHHHHHHHHHHHHTT
T ss_pred CC------hHHhHHHHHHHHhcc
Confidence 22 345555555555544
No 484
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=97.72 E-value=1.3e-05 Score=90.34 Aligned_cols=39 Identities=36% Similarity=0.520 Sum_probs=36.5
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCeEEEEecCCCCCCCc
Q 035870 1 MRVAVIGAGISGLVSAYVLAKAGVEVVLYEKDDYLGGHA 39 (842)
Q Consensus 1 kdV~IIGaGiaGLsaA~~L~~~G~~V~VlEa~~~~GG~~ 39 (842)
+||+|||||++|++||..|++.|++|+|+|+++.+||.+
T Consensus 6 ~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~ 44 (478)
T 1v59_A 6 HDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGKLGGTC 44 (478)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHH
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCcCCcc
Confidence 389999999999999999999999999999999999864
No 485
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=97.69 E-value=1.5e-05 Score=89.76 Aligned_cols=39 Identities=33% Similarity=0.593 Sum_probs=36.4
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCeEEEEecCCCCCCCc
Q 035870 1 MRVAVIGAGISGLVSAYVLAKAGVEVVLYEKDDYLGGHA 39 (842)
Q Consensus 1 kdV~IIGaGiaGLsaA~~L~~~G~~V~VlEa~~~~GG~~ 39 (842)
+||+|||||++|++||..|++.|++|+|+|+++.+||.+
T Consensus 7 ~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~ 45 (482)
T 1ojt_A 7 YDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKTLGGVC 45 (482)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSCSSHHH
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCce
Confidence 479999999999999999999999999999988899854
No 486
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=97.66 E-value=0.0001 Score=72.25 Aligned_cols=112 Identities=13% Similarity=0.115 Sum_probs=71.8
Q ss_pred HHHHHHHHHcCCCCCCeEEEeccCchHHHHHHHHhcCC-EEEEEcCCHHHHHHHHHHHHHcCCC---CCe---EEEEc-c
Q 035870 616 RKVSLLIEKARVSKGQEVLEIGCGWGTLAIEIVKRTGC-KYTGITLSEEQLKYAEMKVKEAGLQ---DLI---RLYLC-D 687 (842)
Q Consensus 616 ~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~-~v~gid~s~~~~~~a~~~~~~~~l~---~~v---~~~~~-d 687 (842)
.|+..|.++--++|+++|||+||+.|+++.++++..+. .|.|.++..+. . ...+. ..+ .|.++ |
T Consensus 60 yKL~EIdeK~likpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~-~-------~~P~~~~~~Gv~~i~~~~G~D 131 (269)
T 2px2_A 60 AKLRWLVERRFVQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPG-H-------EEPMLMQSYGWNIVTMKSGVD 131 (269)
T ss_dssp HHHHHHHHTTSCCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTT-S-------CCCCCCCSTTGGGEEEECSCC
T ss_pred HHHHHHHHcCCCCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEcccc-c-------cCCCcccCCCceEEEeeccCC
Confidence 45566666655789999999999999999999887222 44555554331 0 00111 133 55557 9
Q ss_pred ccCCccCCCccEEEEcchhhhcChhh-----HHHHHHHHHhccccCc-EEEEEeec
Q 035870 688 YRQLAKANKYDRIISCEMIEAVGHEF-----MEEFFGCCESLLAEDG-LLVLQFIS 737 (842)
Q Consensus 688 ~~~~~~~~~fD~i~s~~~~~~~~~~~-----~~~~~~~~~~~LkpgG-~~~~~~~~ 737 (842)
+.++. ..++|+|+|--.=. -+... ...++.-+.++|+||| .|++-.+.
T Consensus 132 f~~~~-~~~~DvVLSDMAPn-SG~~~vD~~Rs~~aL~~A~~~Lk~gG~~FvvKVFq 185 (269)
T 2px2_A 132 VFYKP-SEISDTLLCDIGES-SPSAEIEEQRTLRILEMVSDWLSRGPKEFCIKILC 185 (269)
T ss_dssp GGGSC-CCCCSEEEECCCCC-CSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESC
T ss_pred ccCCC-CCCCCEEEeCCCCC-CCccHHHHHHHHHHHHHHHHHhhcCCcEEEEEECC
Confidence 98865 35799999953211 22111 1125666779999999 89987665
No 487
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=97.65 E-value=0.00014 Score=81.94 Aligned_cols=49 Identities=18% Similarity=0.199 Sum_probs=40.4
Q ss_pred HHHHhhhcCceEEeCCCeeEEEeCCCcEEEEeCC----CcEEeCCEEEEccCh
Q 035870 221 VRKQLESWGCQIRTSSEVCSVLPADKGCTIVCGD----GSREFYNSCVMALHA 269 (842)
Q Consensus 221 L~~~l~~~G~~i~~~~~V~~I~~~~~~v~V~~~~----G~~~~ad~VV~A~p~ 269 (842)
+.+.++++|++|+++++|++|+.+++++.|++.+ |+++.||.||+|+..
T Consensus 232 l~~~l~~~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~~g~~~~~D~vv~a~G~ 284 (482)
T 1ojt_A 232 WQKQNEYRFDNIMVNTKTVAVEPKEDGVYVTFEGANAPKEPQRYDAVLVAAGR 284 (482)
T ss_dssp HHHHHGGGEEEEECSCEEEEEEEETTEEEEEEESSSCCSSCEEESCEEECCCE
T ss_pred HHHHHHhcCCEEEECCEEEEEEEcCCeEEEEEeccCCCceEEEcCEEEECcCC
Confidence 3455666799999999999999887777777766 778999999999864
No 488
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=97.64 E-value=0.00014 Score=76.00 Aligned_cols=59 Identities=20% Similarity=0.193 Sum_probs=50.8
Q ss_pred HHHHHHHHHcCCCCCCeEEEeccCchHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHHcC
Q 035870 616 RKVSLLIEKARVSKGQEVLEIGCGWGTLAIEIVKRTGCKYTGITLSEEQLKYAEMKVKEAG 676 (842)
Q Consensus 616 ~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gid~s~~~~~~a~~~~~~~~ 676 (842)
..++.+++... .+++.|||++||+|..++.+++. |.+++|+|+++++++.|++|++...
T Consensus 223 ~l~~~~i~~~~-~~~~~vlD~f~GsGt~~~~a~~~-g~~~~g~e~~~~~~~~a~~r~~~~~ 281 (297)
T 2zig_A 223 ELAERLVRMFS-FVGDVVLDPFAGTGTTLIAAARW-GRRALGVELVPRYAQLAKERFAREV 281 (297)
T ss_dssp HHHHHHHHHHC-CTTCEEEETTCTTTHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHhC-CCCCEEEECCCCCCHHHHHHHHc-CCeEEEEeCCHHHHHHHHHHHHHhc
Confidence 44556666665 78999999999999999998876 8999999999999999999998753
No 489
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.64 E-value=0.00012 Score=81.88 Aligned_cols=34 Identities=26% Similarity=0.417 Sum_probs=31.6
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCeEEEEecCCC
Q 035870 1 MRVAVIGAGISGLVSAYVLAKAGVEVVLYEKDDY 34 (842)
Q Consensus 1 kdV~IIGaGiaGLsaA~~L~~~G~~V~VlEa~~~ 34 (842)
|+|+|||||.+|+.+|..|++.|.+|+|+|+.++
T Consensus 172 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 205 (458)
T 1lvl_A 172 QHLVVVGGGYIGLELGIAYRKLGAQVSVVEARER 205 (458)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred CeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCc
Confidence 5799999999999999999999999999998654
No 490
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.63 E-value=2e-05 Score=88.20 Aligned_cols=53 Identities=15% Similarity=0.097 Sum_probs=42.4
Q ss_pred hHHHHHHHHHhhhcCceEEeCCCeeEEEeCCCcEEEEeCCC--cEEeCCEEEEccCh
Q 035870 215 HSYVNKVRKQLESWGCQIRTSSEVCSVLPADKGCTIVCGDG--SREFYNSCVMALHA 269 (842)
Q Consensus 215 ~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G--~~~~ad~VV~A~p~ 269 (842)
..+.+.+.+.+++.|++++++++|++|+. ++ +.|++.+| +++.+|.||+|++.
T Consensus 212 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~-~~-v~v~~~~G~~~~i~~D~vv~a~G~ 266 (458)
T 1lvl_A 212 SELTAPVAESLKKLGIALHLGHSVEGYEN-GC-LLANDGKGGQLRLEADRVLVAVGR 266 (458)
T ss_dssp HHHHHHHHHHHHHHTCEEETTCEEEEEET-TE-EEEECSSSCCCEECCSCEEECCCE
T ss_pred HHHHHHHHHHHHHCCCEEEECCEEEEEEe-CC-EEEEECCCceEEEECCEEEECcCC
Confidence 45777788888888999999999999987 43 76665456 57999999999864
No 491
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.62 E-value=2.6e-05 Score=87.18 Aligned_cols=38 Identities=39% Similarity=0.557 Sum_probs=35.0
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCeEEEEecCCCCCCCc
Q 035870 1 MRVAVIGAGISGLVSAYVLAKAGVEVVLYEKDDYLGGHA 39 (842)
Q Consensus 1 kdV~IIGaGiaGLsaA~~L~~~G~~V~VlEa~~~~GG~~ 39 (842)
+||+|||||++|++||..|++.|++|+|+|++ .+||.+
T Consensus 4 ~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~gG~~ 41 (455)
T 1ebd_A 4 TETLVVGAGPGGYVAAIRAAQLGQKVTIVEKG-NLGGVC 41 (455)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHH
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEECC-CCCCcC
Confidence 58999999999999999999999999999997 778744
No 492
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=97.62 E-value=3.7e-05 Score=90.33 Aligned_cols=40 Identities=35% Similarity=0.553 Sum_probs=37.6
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCeEEEEecCCCCCCCce
Q 035870 1 MRVAVIGAGISGLVSAYVLAKAGVEVVLYEKDDYLGGHAK 40 (842)
Q Consensus 1 kdV~IIGaGiaGLsaA~~L~~~G~~V~VlEa~~~~GG~~~ 40 (842)
+||+|||||+|||+||..|++.|++|+|+|+++.+||...
T Consensus 374 ~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~gg~~~ 413 (671)
T 1ps9_A 374 KNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEIGGQFN 413 (671)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSCTTHH
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCeee
Confidence 5899999999999999999999999999999999999753
No 493
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=97.62 E-value=3e-05 Score=87.45 Aligned_cols=55 Identities=15% Similarity=0.219 Sum_probs=43.1
Q ss_pred hHHHHHHHHHhhhcCceEEeCCCeeEEEeCC-CcEEEEeCC---Cc--EEeCCEEEEccCh
Q 035870 215 HSYVNKVRKQLESWGCQIRTSSEVCSVLPAD-KGCTIVCGD---GS--REFYNSCVMALHA 269 (842)
Q Consensus 215 ~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~-~~v~V~~~~---G~--~~~ad~VV~A~p~ 269 (842)
..+.+.+.+.++++|+++++++.|++|...+ +.+.|++.+ |+ ++.+|.||+|+..
T Consensus 225 ~~~~~~l~~~l~~~gv~~~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~~~~D~vi~a~G~ 285 (488)
T 3dgz_A 225 QQMSSLVTEHMESHGTQFLKGCVPSHIKKLPTNQLQVTWEDHASGKEDTGTFDTVLWAIGR 285 (488)
T ss_dssp HHHHHHHHHHHHHTTCEEEETEEEEEEEECTTSCEEEEEEETTTTEEEEEEESEEEECSCE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEEcCCCcEEEEEEeCCCCeeEEEECCEEEEcccC
Confidence 4677888888888999999999999998754 446665543 54 4789999999863
No 494
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=97.61 E-value=3.6e-05 Score=94.49 Aligned_cols=39 Identities=33% Similarity=0.757 Sum_probs=36.7
Q ss_pred CcEEEECCChHHHHHHHHHHhCCC-eEEEEecCCCCCCCc
Q 035870 1 MRVAVIGAGISGLVSAYVLAKAGV-EVVLYEKDDYLGGHA 39 (842)
Q Consensus 1 kdV~IIGaGiaGLsaA~~L~~~G~-~V~VlEa~~~~GG~~ 39 (842)
|||+|||||+|||+||+.|++.|+ +|+|+|+.+.+||..
T Consensus 188 ~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~~~GG~~ 227 (1025)
T 1gte_A 188 AKIALLGAGPASISCASFLARLGYSDITIFEKQEYVGGLS 227 (1025)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSCSTHH
T ss_pred CEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCCCCCccc
Confidence 589999999999999999999999 799999999999964
No 495
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=97.60 E-value=0.00033 Score=78.85 Aligned_cols=49 Identities=18% Similarity=0.108 Sum_probs=41.7
Q ss_pred HHHHhhhcCceEEeCCCeeEEEeCCCcEEEEeCCCcEEeCCEEEEccCh
Q 035870 221 VRKQLESWGCQIRTSSEVCSVLPADKGCTIVCGDGSREFYNSCVMALHA 269 (842)
Q Consensus 221 L~~~l~~~G~~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VV~A~p~ 269 (842)
+.+.++++|++|+++++|++|..+++++.|++.+|+++.||.||+|++.
T Consensus 232 ~~~~l~~~GV~v~~~~~V~~i~~~~~~~~v~l~dG~~i~aD~Vv~a~G~ 280 (493)
T 1m6i_A 232 TMEKVRREGVKVMPNAIVQSVGVSSGKLLIKLKDGRKVETDHIVAAVGL 280 (493)
T ss_dssp HHHHHHTTTCEEECSCCEEEEEEETTEEEEEETTSCEEEESEEEECCCE
T ss_pred HHHHHHhcCCEEEeCCEEEEEEecCCeEEEEECCCCEEECCEEEECCCC
Confidence 3445566799999999999998877778889999999999999999874
No 496
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=97.58 E-value=3.7e-05 Score=87.36 Aligned_cols=38 Identities=32% Similarity=0.471 Sum_probs=34.6
Q ss_pred cEEEECCChHHHHHHHHHHhCCCeEEEEecCC--------CCCCCc
Q 035870 2 RVAVIGAGISGLVSAYVLAKAGVEVVLYEKDD--------YLGGHA 39 (842)
Q Consensus 2 dV~IIGaGiaGLsaA~~L~~~G~~V~VlEa~~--------~~GG~~ 39 (842)
||+|||||++||+||..|++.|++|+|+|+++ .+||.+
T Consensus 34 DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc 79 (519)
T 3qfa_A 34 DLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVTPTPLGTRWGLGGTC 79 (519)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTCHH
T ss_pred CEEEECCCHHHHHHHHHHHhCCCeEEEEeccCccccccCCCccccc
Confidence 89999999999999999999999999999964 677754
No 497
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=97.54 E-value=3.3e-05 Score=86.54 Aligned_cols=38 Identities=32% Similarity=0.513 Sum_probs=34.5
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCeEEEEecCCCCCCCc
Q 035870 1 MRVAVIGAGISGLVSAYVLAKAGVEVVLYEKDDYLGGHA 39 (842)
Q Consensus 1 kdV~IIGaGiaGLsaA~~L~~~G~~V~VlEa~~~~GG~~ 39 (842)
+||+|||||++|++||..|++.|++|+|+|+++ +||.+
T Consensus 7 ~dvvIIG~G~aG~~aA~~l~~~g~~V~lie~~~-~GG~~ 44 (464)
T 2eq6_A 7 YDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGE-VGGVC 44 (464)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-TTHHH
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCC-CCCCC
Confidence 379999999999999999999999999999977 78743
No 498
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=97.54 E-value=5.2e-05 Score=87.72 Aligned_cols=38 Identities=26% Similarity=0.423 Sum_probs=35.8
Q ss_pred cEEEECCChHHHHHHHHHHhCCCeEEEEecCCCCCCCc
Q 035870 2 RVAVIGAGISGLVSAYVLAKAGVEVVLYEKDDYLGGHA 39 (842)
Q Consensus 2 dV~IIGaGiaGLsaA~~L~~~G~~V~VlEa~~~~GG~~ 39 (842)
||+|||||++||+||+.|++.|++|+|+|+.+..||.+
T Consensus 48 dvvIIG~G~aGl~aA~~l~~~G~~V~liE~~~~~gg~~ 85 (623)
T 3pl8_A 48 DVVIVGSGPIGCTYARELVGAGYKVAMFDIGEIDSGLK 85 (623)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCSSSS
T ss_pred CEEEECCcHHHHHHHHHHHhCCCcEEEEeccCCCCCcc
Confidence 79999999999999999999999999999999888844
No 499
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=97.54 E-value=0.00058 Score=76.88 Aligned_cols=34 Identities=44% Similarity=0.555 Sum_probs=31.5
Q ss_pred CcEEEECCChHHHHHHHHHHhCCCeEEEEecCCC
Q 035870 1 MRVAVIGAGISGLVSAYVLAKAGVEVVLYEKDDY 34 (842)
Q Consensus 1 kdV~IIGaGiaGLsaA~~L~~~G~~V~VlEa~~~ 34 (842)
|+|+|||||.+|+-.|..|++.|.+|+|+|+.++
T Consensus 195 ~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ 228 (490)
T 2bc0_A 195 KRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVDT 228 (490)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred ceEEEECCCHHHHHHHHHHHHCCCeEEEEEcccc
Confidence 5799999999999999999999999999998654
No 500
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=97.52 E-value=4.1e-05 Score=84.87 Aligned_cols=53 Identities=6% Similarity=-0.114 Sum_probs=40.7
Q ss_pred hhHHHHHHHHHhhhcCceEEeCCCeeEEEeCCCcEEEEeC--CCcEEeCCEEEEccC
Q 035870 214 SHSYVNKVRKQLESWGCQIRTSSEVCSVLPADKGCTIVCG--DGSREFYNSCVMALH 268 (842)
Q Consensus 214 ~~~l~~~L~~~l~~~G~~i~~~~~V~~I~~~~~~v~V~~~--~G~~~~ad~VV~A~p 268 (842)
+..+.+.+.+.++++|++++++++|++|+. +++.++.. +|+++.||.||++++
T Consensus 199 ~~~~~~~l~~~l~~~GV~i~~~~~v~~v~~--~~v~~~~~~~~g~~i~~D~vv~a~G 253 (430)
T 3h28_A 199 IGASKRLVEDLFAERNIDWIANVAVKAIEP--DKVIYEDLNGNTHEVPAKFTMFMPS 253 (430)
T ss_dssp STTHHHHHHHHHHHTTCEEECSCEEEEECS--SEEEEECTTSCEEEEECSEEEEECE
T ss_pred chHHHHHHHHHHHHCCCEEEeCCEEEEEeC--CeEEEEecCCCceEEeeeEEEECCC
Confidence 345677788888889999999999999954 44555432 266899999999865
Done!