BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 035873
(275 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9C6I8|NOG1_ARATH Nucleolar GTP-binding protein 1 OS=Arabidopsis thaliana
GN=At1g50920 PE=2 SV=1
Length = 671
Score = 533 bits (1373), Expect = e-151, Method: Compositional matrix adjust.
Identities = 250/275 (90%), Positives = 262/275 (95%)
Query: 1 MVQYNFKKITVVPNGKDIVDIILSRTQRQTPTVVHKGYSITRLRRFYMRKVKYTQQNFFE 60
MVQYNFK+ITVVPNGK+ VDIILSRTQRQTPTVVHKGY I RLR+FYMRKVKYTQ NF
Sbjct: 1 MVQYNFKRITVVPNGKEFVDIILSRTQRQTPTVVHKGYKINRLRQFYMRKVKYTQTNFHA 60
Query: 61 KLSTIIDEFPRLDDIHPFYGDLLHVLYNKDHYKLALGQINTARNLISKIAKDYVKLLKYG 120
KLS IIDEFPRL+ IHPFYGDLLHVLYNKDHYKLALGQ+NTARNLISKI+KDYVKLLKYG
Sbjct: 61 KLSAIIDEFPRLEQIHPFYGDLLHVLYNKDHYKLALGQVNTARNLISKISKDYVKLLKYG 120
Query: 121 DSLYCCKSLEVAALGRMCTVVKRIGPSLAYLEQIRQHMARLPSIDPNTRTILICWYPNVG 180
DSLY CK L+VAALGRMCTV+KRI PSLAYLEQIRQHMARLPSIDPNTRT+LIC YPNVG
Sbjct: 121 DSLYRCKCLKVAALGRMCTVLKRITPSLAYLEQIRQHMARLPSIDPNTRTVLICGYPNVG 180
Query: 181 KSSFMNKITRADVDVQPYAFTTKSLFVGHTDYKYLRYQVIDTPGILDRPFEDHNIIEMCS 240
KSSFMNK+TRADVDVQPYAFTTKSLFVGHTDYKYLRYQVIDTPGILDRPFED NIIEMCS
Sbjct: 181 KSSFMNKVTRADVDVQPYAFTTKSLFVGHTDYKYLRYQVIDTPGILDRPFEDRNIIEMCS 240
Query: 241 ITALAHLRSAVLFFLDISGSCGYSIAQQAALFHSI 275
ITALAHLR+AVLFFLDISGSCGY+IAQQAALFHSI
Sbjct: 241 ITALAHLRAAVLFFLDISGSCGYTIAQQAALFHSI 275
>sp|Q9BZE4|NOG1_HUMAN Nucleolar GTP-binding protein 1 OS=Homo sapiens GN=GTPBP4 PE=1 SV=3
Length = 634
Score = 434 bits (1117), Expect = e-121, Method: Compositional matrix adjust.
Identities = 193/275 (70%), Positives = 237/275 (86%)
Query: 1 MVQYNFKKITVVPNGKDIVDIILSRTQRQTPTVVHKGYSITRLRRFYMRKVKYTQQNFFE 60
M YNFKKITVVP+ KD +D+ LS+TQR+TPTV+HK Y I R+R FYMRKVK+TQQN+ +
Sbjct: 1 MAHYNFKKITVVPSAKDFIDLTLSKTQRKTPTVIHKHYQIHRIRHFYMRKVKFTQQNYHD 60
Query: 61 KLSTIIDEFPRLDDIHPFYGDLLHVLYNKDHYKLALGQINTARNLISKIAKDYVKLLKYG 120
+LS I+ +FP+LDDIHPFY DL+++LY+KDHYKLALGQIN A+NL+ +AKDYV+L+KYG
Sbjct: 61 RLSQILTDFPKLDDIHPFYADLMNILYDKDHYKLALGQINIAKNLVDNVAKDYVRLMKYG 120
Query: 121 DSLYCCKSLEVAALGRMCTVVKRIGPSLAYLEQIRQHMARLPSIDPNTRTILICWYPNVG 180
DSLY CK L+ AALGRMCTV+KR SL YLEQ+RQH++RLP+IDPNTRT+L+C YPNVG
Sbjct: 121 DSLYRCKQLKRAALGRMCTVIKRQKQSLEYLEQVRQHLSRLPTIDPNTRTLLLCGYPNVG 180
Query: 181 KSSFMNKITRADVDVQPYAFTTKSLFVGHTDYKYLRYQVIDTPGILDRPFEDHNIIEMCS 240
KSSF+NK+TRADVDVQPYAFTTKSLFVGH DYKYLR+QV+DTPGILD P ED N IEM +
Sbjct: 181 KSSFINKVTRADVDVQPYAFTTKSLFVGHMDYKYLRWQVVDTPGILDHPLEDRNTIEMQA 240
Query: 241 ITALAHLRSAVLFFLDISGSCGYSIAQQAALFHSI 275
ITALAHLR+AVL+ +D+S CG+ + +Q LF +I
Sbjct: 241 ITALAHLRAAVLYVMDLSEQCGHGLREQLELFQNI 275
>sp|Q99P77|NOG1_RAT Nucleolar GTP-binding protein 1 OS=Rattus norvegicus GN=Gtpbp4 PE=2
SV=3
Length = 637
Score = 434 bits (1115), Expect = e-121, Method: Compositional matrix adjust.
Identities = 192/275 (69%), Positives = 237/275 (86%)
Query: 1 MVQYNFKKITVVPNGKDIVDIILSRTQRQTPTVVHKGYSITRLRRFYMRKVKYTQQNFFE 60
M YNFKKITVVP+ KD +D+ LS+TQR+TPTV+HK Y I R+R FYMRKVK+TQQN+ +
Sbjct: 1 MAHYNFKKITVVPSAKDFIDLTLSKTQRKTPTVIHKHYQIHRIRHFYMRKVKFTQQNYHD 60
Query: 61 KLSTIIDEFPRLDDIHPFYGDLLHVLYNKDHYKLALGQINTARNLISKIAKDYVKLLKYG 120
+LS I+ +FP+LDDIHPFY DL+++LY+KDHYKLALGQIN A+NL+ +AKDYV+L+KYG
Sbjct: 61 RLSQILSDFPKLDDIHPFYADLMNILYDKDHYKLALGQINIAKNLVDNVAKDYVRLMKYG 120
Query: 121 DSLYCCKSLEVAALGRMCTVVKRIGPSLAYLEQIRQHMARLPSIDPNTRTILICWYPNVG 180
DSLY CK L+ AALGRMCT++KR SL YLEQ+RQH++RLP+IDPNTRT+L+C YPNVG
Sbjct: 121 DSLYRCKQLKRAALGRMCTIIKRQRQSLEYLEQVRQHLSRLPTIDPNTRTLLLCGYPNVG 180
Query: 181 KSSFMNKITRADVDVQPYAFTTKSLFVGHTDYKYLRYQVIDTPGILDRPFEDHNIIEMCS 240
KSSF+NK+TRADVDVQPYAFTTKSLFVGH DYKYLR+QV+DTPGILD P ED N IEM +
Sbjct: 181 KSSFINKVTRADVDVQPYAFTTKSLFVGHVDYKYLRWQVVDTPGILDHPLEDRNTIEMQA 240
Query: 241 ITALAHLRSAVLFFLDISGSCGYSIAQQAALFHSI 275
ITALAHLR+AVL+ +D+S CG+ + +Q LF +I
Sbjct: 241 ITALAHLRAAVLYVMDLSEQCGHGLKEQLGLFQNI 275
>sp|Q99ME9|NOG1_MOUSE Nucleolar GTP-binding protein 1 OS=Mus musculus GN=Gtpbp4 PE=2 SV=3
Length = 634
Score = 433 bits (1114), Expect = e-121, Method: Compositional matrix adjust.
Identities = 192/275 (69%), Positives = 237/275 (86%)
Query: 1 MVQYNFKKITVVPNGKDIVDIILSRTQRQTPTVVHKGYSITRLRRFYMRKVKYTQQNFFE 60
M YNFKKITVVP+ KD +D+ LS+TQR+TPTV+HK Y I R+R FYMRKVK+TQQN+ +
Sbjct: 1 MAHYNFKKITVVPSAKDFIDLTLSKTQRKTPTVIHKHYQIHRIRHFYMRKVKFTQQNYHD 60
Query: 61 KLSTIIDEFPRLDDIHPFYGDLLHVLYNKDHYKLALGQINTARNLISKIAKDYVKLLKYG 120
+LS I+ +FP+LDDIHPFY DL+++LY+KDHYKLALGQIN A+NL+ +AKDYV+L+KYG
Sbjct: 61 RLSQILSDFPKLDDIHPFYADLMNILYDKDHYKLALGQINIAKNLVDNVAKDYVRLMKYG 120
Query: 121 DSLYCCKSLEVAALGRMCTVVKRIGPSLAYLEQIRQHMARLPSIDPNTRTILICWYPNVG 180
DSLY CK L+ AALGRMCT++KR SL YLEQ+RQH++RLP+IDPNTRT+L+C YPNVG
Sbjct: 121 DSLYRCKQLKRAALGRMCTIIKRQRQSLEYLEQVRQHLSRLPTIDPNTRTLLLCGYPNVG 180
Query: 181 KSSFMNKITRADVDVQPYAFTTKSLFVGHTDYKYLRYQVIDTPGILDRPFEDHNIIEMCS 240
KSSF+NK+TRADVDVQPYAFTTKSLFVGH DYKYLR+QV+DTPGILD P ED N IEM +
Sbjct: 181 KSSFINKVTRADVDVQPYAFTTKSLFVGHMDYKYLRWQVVDTPGILDHPLEDRNTIEMQA 240
Query: 241 ITALAHLRSAVLFFLDISGSCGYSIAQQAALFHSI 275
ITALAHLR+AVL+ +D+S CG+ + +Q LF +I
Sbjct: 241 ITALAHLRAAVLYVMDLSEQCGHGLKEQLELFQNI 275
>sp|Q9V411|NOG1_DROME Probable nucleolar GTP-binding protein 1 OS=Drosophila melanogaster
GN=CG8801 PE=2 SV=1
Length = 652
Score = 433 bits (1113), Expect = e-121, Method: Compositional matrix adjust.
Identities = 196/275 (71%), Positives = 239/275 (86%)
Query: 1 MVQYNFKKITVVPNGKDIVDIILSRTQRQTPTVVHKGYSITRLRRFYMRKVKYTQQNFFE 60
M YNFKKI VVP KD +DI+LS+TQR+TPTVVHKGY I+R+R FY RKVKYTQQNF +
Sbjct: 1 MSLYNFKKIMVVPPAKDFIDIMLSKTQRKTPTVVHKGYKISRIRAFYTRKVKYTQQNFHD 60
Query: 61 KLSTIIDEFPRLDDIHPFYGDLLHVLYNKDHYKLALGQINTARNLISKIAKDYVKLLKYG 120
+LS II +FP+LDD+HPFY DL++VLY+KDHYKLALGQ+NTAR+L+ +AKDYV+LLKYG
Sbjct: 61 RLSQIIQDFPKLDDVHPFYADLMNVLYDKDHYKLALGQLNTARHLVDNVAKDYVRLLKYG 120
Query: 121 DSLYCCKSLEVAALGRMCTVVKRIGPSLAYLEQIRQHMARLPSIDPNTRTILICWYPNVG 180
DSLY CK L+ AALGRM T++KR +L YLEQ+RQH++RLP+IDP +RTI+IC +PNVG
Sbjct: 121 DSLYRCKQLKKAALGRMATIMKRQASNLTYLEQVRQHLSRLPTIDPYSRTIIICGFPNVG 180
Query: 181 KSSFMNKITRADVDVQPYAFTTKSLFVGHTDYKYLRYQVIDTPGILDRPFEDHNIIEMCS 240
KSSF+NKITRADV+VQPYAFTTKSL+VGHTDYKYLR+QVIDTPGILD P E+ N+IEM +
Sbjct: 181 KSSFINKITRADVEVQPYAFTTKSLYVGHTDYKYLRWQVIDTPGILDHPLEERNVIEMQA 240
Query: 241 ITALAHLRSAVLFFLDISGSCGYSIAQQAALFHSI 275
ITALAHLR+ VL+F+DIS CG+S+ +Q LF SI
Sbjct: 241 ITALAHLRACVLYFMDISEQCGHSLEEQVKLFESI 275
>sp|Q54N72|NOG1_DICDI Probable nucleolar GTP-binding protein 1 OS=Dictyostelium
discoideum GN=nog1 PE=1 SV=1
Length = 674
Score = 424 bits (1089), Expect = e-118, Method: Compositional matrix adjust.
Identities = 198/275 (72%), Positives = 234/275 (85%)
Query: 1 MVQYNFKKITVVPNGKDIVDIILSRTQRQTPTVVHKGYSITRLRRFYMRKVKYTQQNFFE 60
MV YNFKKI VVP KD +DI+LS+TQR+TPT +HK Y+I R+R FYMRKVKYT Q++ E
Sbjct: 1 MVLYNFKKIQVVPTSKDFIDIVLSKTQRKTPTEIHKQYAIGRIRTFYMRKVKYTAQSYHE 60
Query: 61 KLSTIIDEFPRLDDIHPFYGDLLHVLYNKDHYKLALGQINTARNLISKIAKDYVKLLKYG 120
KL+ II +FP LDDIHPFY DL++VLY+KDHYKLALGQ+NTARNLI ++KDY++LLKYG
Sbjct: 61 KLTQIIGDFPLLDDIHPFYADLINVLYDKDHYKLALGQLNTARNLIDNLSKDYLRLLKYG 120
Query: 121 DSLYCCKSLEVAALGRMCTVVKRIGPSLAYLEQIRQHMARLPSIDPNTRTILICWYPNVG 180
DSLY CK L+ A+LGRMCT++ + GPSL YLEQ+RQH+ARLPSIDPNTRT+L+ YPNVG
Sbjct: 121 DSLYRCKQLKRASLGRMCTLMLKQGPSLQYLEQVRQHLARLPSIDPNTRTLLLTGYPNVG 180
Query: 181 KSSFMNKITRADVDVQPYAFTTKSLFVGHTDYKYLRYQVIDTPGILDRPFEDHNIIEMCS 240
KSSFMNK+TRA+VDVQPYAFTTKSLFVGHTD+KY +QVIDTPGILD P ++ N IEM S
Sbjct: 181 KSSFMNKLTRANVDVQPYAFTTKSLFVGHTDFKYNTWQVIDTPGILDHPLDERNTIEMQS 240
Query: 241 ITALAHLRSAVLFFLDISGSCGYSIAQQAALFHSI 275
ITALAHL S VLF +DIS CGY+I QQ LF SI
Sbjct: 241 ITALAHLHSCVLFLIDISERCGYTIKQQVDLFFSI 275
>sp|Q9U6A9|NOG1_TRYBB Nucleolar GTP-binding protein 1 OS=Trypanosoma brucei brucei
GN=NOG1 PE=1 SV=1
Length = 655
Score = 417 bits (1073), Expect = e-116, Method: Compositional matrix adjust.
Identities = 186/272 (68%), Positives = 233/272 (85%)
Query: 4 YNFKKITVVPNGKDIVDIILSRTQRQTPTVVHKGYSITRLRRFYMRKVKYTQQNFFEKLS 63
YNFK +TVVP+ KD +DI+LS+TQR+TPTVVHKGY I+R+R+FYMRKVK+TQ+ EKL+
Sbjct: 5 YNFKTVTVVPSYKDFIDIVLSKTQRKTPTVVHKGYHISRIRQFYMRKVKFTQKTINEKLT 64
Query: 64 TIIDEFPRLDDIHPFYGDLLHVLYNKDHYKLALGQINTARNLISKIAKDYVKLLKYGDSL 123
I+ EFPR+DDIHPFYGDL+HVLY++DHYK+ALGQ+ R+++ + +DYV+LLKYGDSL
Sbjct: 65 HILTEFPRMDDIHPFYGDLMHVLYDRDHYKVALGQVGAVRHMVDNVGRDYVRLLKYGDSL 124
Query: 124 YCCKSLEVAALGRMCTVVKRIGPSLAYLEQIRQHMARLPSIDPNTRTILICWYPNVGKSS 183
Y CK L+ AALGRM T K++ +L YLE++RQHM+RLPSIDPN RT+LI +PNVGKSS
Sbjct: 125 YRCKQLKRAALGRMATACKKLTSALVYLEKVRQHMSRLPSIDPNARTLLITGFPNVGKSS 184
Query: 184 FMNKITRADVDVQPYAFTTKSLFVGHTDYKYLRYQVIDTPGILDRPFEDHNIIEMCSITA 243
FMNK+TRADV+VQPYAFTTKSLFVGHTD+KY +QVIDTPGILD E+ N+IEM +ITA
Sbjct: 185 FMNKVTRADVEVQPYAFTTKSLFVGHTDFKYASWQVIDTPGILDHSLEERNVIEMQAITA 244
Query: 244 LAHLRSAVLFFLDISGSCGYSIAQQAALFHSI 275
LAHLR+ +LFF+D+S CG+SIAQQ +LF SI
Sbjct: 245 LAHLRACILFFMDLSTQCGHSIAQQVSLFKSI 276
>sp|O94659|NOG1_SCHPO Probable nucleolar GTP-binding protein 1 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=nog1 PE=1 SV=2
Length = 642
Score = 399 bits (1025), Expect = e-110, Method: Compositional matrix adjust.
Identities = 179/275 (65%), Positives = 227/275 (82%)
Query: 1 MVQYNFKKITVVPNGKDIVDIILSRTQRQTPTVVHKGYSITRLRRFYMRKVKYTQQNFFE 60
M FK IT +P+ +D++LSRTQR+TPTV+ G+ I+R+R FY RKVK+TQ E
Sbjct: 1 MATAVFKNITPIPDVNTFLDVVLSRTQRKTPTVIRSGFKISRIRGFYGRKVKFTQDTITE 60
Query: 61 KLSTIIDEFPRLDDIHPFYGDLLHVLYNKDHYKLALGQINTARNLISKIAKDYVKLLKYG 120
KL +I+ EFP+L+DIHPF+ DLL++LY++DH K+AL Q++TA++L+ +A+DY++LLKYG
Sbjct: 61 KLDSILQEFPKLNDIHPFHADLLNILYDRDHLKIALSQLSTAKHLVENVARDYIRLLKYG 120
Query: 121 DSLYCCKSLEVAALGRMCTVVKRIGPSLAYLEQIRQHMARLPSIDPNTRTILICWYPNVG 180
DSLY CK L+ AALGRM T++KR SL +LEQ+RQH++RLP+IDPNTRT+L+C YPNVG
Sbjct: 121 DSLYRCKQLKRAALGRMATIIKRQKSSLEFLEQVRQHLSRLPAIDPNTRTLLVCGYPNVG 180
Query: 181 KSSFMNKITRADVDVQPYAFTTKSLFVGHTDYKYLRYQVIDTPGILDRPFEDHNIIEMCS 240
KSSFMNK+TRA VDVQPYAFTTKSLFVGH DYKYLR+QVIDTPGILD P E N IEM S
Sbjct: 181 KSSFMNKVTRAQVDVQPYAFTTKSLFVGHFDYKYLRWQVIDTPGILDHPLEQMNTIEMQS 240
Query: 241 ITALAHLRSAVLFFLDISGSCGYSIAQQAALFHSI 275
ITA+AHLRSAVL+F+D+S CGYS+A Q L+HSI
Sbjct: 241 ITAMAHLRSAVLYFMDLSEMCGYSVAAQVKLYHSI 275
>sp|O44411|NOG1_CAEEL Probable nucleolar GTP-binding protein 1 OS=Caenorhabditis elegans
GN=T07A9.9 PE=2 SV=1
Length = 681
Score = 390 bits (1001), Expect = e-108, Method: Compositional matrix adjust.
Identities = 171/272 (62%), Positives = 228/272 (83%)
Query: 4 YNFKKITVVPNGKDIVDIILSRTQRQTPTVVHKGYSITRLRRFYMRKVKYTQQNFFEKLS 63
YNFK+IT VPN +++ D++LS+TQR+TPTVVH+ YSI R+R FY RK+K+ QQ +KL+
Sbjct: 5 YNFKRITCVPNAQELKDVVLSKTQRKTPTVVHRQYSIGRIRAFYARKIKFLQQTLHDKLT 64
Query: 64 TIIDEFPRLDDIHPFYGDLLHVLYNKDHYKLALGQINTARNLISKIAKDYVKLLKYGDSL 123
II EFP++++IHPFY DL+++LY++DHYK+ALGQ+NTAR+LI IA++YV+L+KY DSL
Sbjct: 65 QIITEFPKMEEIHPFYSDLMNILYDRDHYKIALGQMNTARHLIDGIAREYVRLMKYADSL 124
Query: 124 YCCKSLEVAALGRMCTVVKRIGPSLAYLEQIRQHMARLPSIDPNTRTILICWYPNVGKSS 183
Y CK L+ AALGRM ++KR S YLEQ+RQH++RLPSIDP TRT+++C +PNVGKSS
Sbjct: 125 YRCKMLKRAALGRMVKLLKRQKSSFEYLEQVRQHLSRLPSIDPATRTLILCGFPNVGKSS 184
Query: 184 FMNKITRADVDVQPYAFTTKSLFVGHTDYKYLRYQVIDTPGILDRPFEDHNIIEMCSITA 243
F+N +TRADV+VQPYAFTTK+L+VGH DY++LR+QVIDTPGILD+P ED N IEM ++TA
Sbjct: 185 FINNVTRADVEVQPYAFTTKALYVGHLDYRFLRWQVIDTPGILDQPLEDRNTIEMQAVTA 244
Query: 244 LAHLRSAVLFFLDISGSCGYSIAQQAALFHSI 275
LAHL+++VLF +D+S C SI +Q LF SI
Sbjct: 245 LAHLKASVLFMMDVSEQCDRSIEEQLHLFESI 276
>sp|Q02892|NOG1_YEAST Nucleolar GTP-binding protein 1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=NOG1 PE=1 SV=1
Length = 647
Score = 373 bits (958), Expect = e-103, Method: Compositional matrix adjust.
Identities = 169/274 (61%), Positives = 219/274 (79%)
Query: 2 VQYNFKKITVVPNGKDIVDIILSRTQRQTPTVVHKGYSITRLRRFYMRKVKYTQQNFFEK 61
+Q ++K I V D++DI+L+RTQR+TPTV+ G+ ITR+R FYMRKVKYT + F EK
Sbjct: 1 MQLSWKDIPTVAPANDLLDIVLNRTQRKTPTVIRPGFKITRIRAFYMRKVKYTGEGFVEK 60
Query: 62 LSTIIDEFPRLDDIHPFYGDLLHVLYNKDHYKLALGQINTARNLISKIAKDYVKLLKYGD 121
I+ FP ++D+HPF+ DL+ LY K+HYK++L I+ A++L+ ++A+DYV+LLK+G
Sbjct: 61 FEDILKGFPNINDVHPFHRDLMDTLYEKNHYKISLAAISRAKSLVEQVARDYVRLLKFGQ 120
Query: 122 SLYCCKSLEVAALGRMCTVVKRIGPSLAYLEQIRQHMARLPSIDPNTRTILICWYPNVGK 181
SL+ CK L+ AALGRM T+VK++ LAYLEQ+RQH+ RLPSIDPNTRT+LIC YPNVGK
Sbjct: 121 SLFQCKQLKRAALGRMATIVKKLRDPLAYLEQVRQHIGRLPSIDPNTRTLLICGYPNVGK 180
Query: 182 SSFMNKITRADVDVQPYAFTTKSLFVGHTDYKYLRYQVIDTPGILDRPFEDHNIIEMCSI 241
SSF+ IT++DVDVQPYAFTTKSL+VGH DYKYLR+Q IDTPGILDRP E+ N IEM SI
Sbjct: 181 SSFLRCITKSDVDVQPYAFTTKSLYVGHFDYKYLRFQAIDTPGILDRPTEEMNNIEMQSI 240
Query: 242 TALAHLRSAVLFFLDISGSCGYSIAQQAALFHSI 275
A+AHLRS VL+F+D+S CG++I Q LFHSI
Sbjct: 241 YAIAHLRSCVLYFMDLSEQCGFTIEAQVKLFHSI 274
>sp|Q74ZK6|NOG1_ASHGO Nucleolar GTP-binding protein 1 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=NOG1
PE=3 SV=1
Length = 642
Score = 371 bits (953), Expect = e-102, Method: Compositional matrix adjust.
Identities = 166/274 (60%), Positives = 218/274 (79%)
Query: 2 VQYNFKKITVVPNGKDIVDIILSRTQRQTPTVVHKGYSITRLRRFYMRKVKYTQQNFFEK 61
+Q ++K I VP D++DI+L+RTQR+TPTV+ G+ ITR+R FYMRKVK+T + F EK
Sbjct: 1 MQLSWKDIPTVPTSNDMLDIVLNRTQRKTPTVIRAGFKITRIRAFYMRKVKFTCEGFIEK 60
Query: 62 LSTIIDEFPRLDDIHPFYGDLLHVLYNKDHYKLALGQINTARNLISKIAKDYVKLLKYGD 121
I+ FP ++D+HPF+ DL+ LY K+HYK++L ++ A+ L+ ++A+DYV+LLK+G
Sbjct: 61 FDDILKGFPNINDVHPFHRDLMDTLYEKNHYKVSLASVSRAKTLVEQVARDYVRLLKFGQ 120
Query: 122 SLYCCKSLEVAALGRMCTVVKRIGPSLAYLEQIRQHMARLPSIDPNTRTILICWYPNVGK 181
SL+ CK L+ AALGRM T++K++ L YLEQ+RQH+ RLPSIDPNTRT+LIC YPNVGK
Sbjct: 121 SLFQCKQLKRAALGRMATIMKKLKDPLVYLEQVRQHLGRLPSIDPNTRTLLICGYPNVGK 180
Query: 182 SSFMNKITRADVDVQPYAFTTKSLFVGHTDYKYLRYQVIDTPGILDRPFEDHNIIEMCSI 241
SSF+ IT+ADV+VQPYAFTTKSL+VGH DYKYLR+Q IDTPGILDRP E+ N IEM SI
Sbjct: 181 SSFLRCITKADVEVQPYAFTTKSLYVGHFDYKYLRFQAIDTPGILDRPTEEMNNIEMQSI 240
Query: 242 TALAHLRSAVLFFLDISGSCGYSIAQQAALFHSI 275
A+AHLRS VL+F+D+S CG++I Q LFHSI
Sbjct: 241 YAIAHLRSTVLYFMDLSEQCGFTIEAQVKLFHSI 274
>sp|Q8SVJ8|NOG1_ENCCU Nucleolar GTP-binding protein 1 OS=Encephalitozoon cuniculi (strain
GB-M1) GN=NOG1 PE=3 SV=1
Length = 528
Score = 369 bits (948), Expect = e-101, Method: Compositional matrix adjust.
Identities = 164/274 (59%), Positives = 225/274 (82%)
Query: 2 VQYNFKKITVVPNGKDIVDIILSRTQRQTPTVVHKGYSITRLRRFYMRKVKYTQQNFFEK 61
++ NF IT VP +++DI LS+TQ++TPTV+H Y+I ++R FYMRKVK+ F +
Sbjct: 1 MKANFGYITPVPLNMELIDISLSKTQKRTPTVIHPQYNIVKIRMFYMRKVKHAGNEFASR 60
Query: 62 LSTIIDEFPRLDDIHPFYGDLLHVLYNKDHYKLALGQINTARNLISKIAKDYVKLLKYGD 121
L TI+ +FPR++DIHPFYGDL++VLY++DHYKLALG +N A+N I K++K++VKLLK+ D
Sbjct: 61 LGTILTDFPRIEDIHPFYGDLINVLYDRDHYKLALGHVNAAKNGIEKVSKEFVKLLKFAD 120
Query: 122 SLYCCKSLEVAALGRMCTVVKRIGPSLAYLEQIRQHMARLPSIDPNTRTILICWYPNVGK 181
SLY CK L+ AALGRM + K++G +L YLE++R HM+RLPSID + RT+L+C +PNVGK
Sbjct: 121 SLYRCKQLKRAALGRMASAAKKLGKTLEYLEEVRMHMSRLPSIDLSGRTLLVCGFPNVGK 180
Query: 182 SSFMNKITRADVDVQPYAFTTKSLFVGHTDYKYLRYQVIDTPGILDRPFEDHNIIEMCSI 241
SSF+ KI+RADV+VQPY FTTKSL+VGH DYKYL++QVIDTPGILD+P E+ N IEM SI
Sbjct: 181 SSFVRKISRADVEVQPYPFTTKSLYVGHFDYKYLQWQVIDTPGILDQPLENRNTIEMLSI 240
Query: 242 TALAHLRSAVLFFLDISGSCGYSIAQQAALFHSI 275
TALAH+++ VL+F+D+S +CGYS+ +Q LF+++
Sbjct: 241 TALAHIKAVVLYFIDLSETCGYSVEEQMDLFNTL 274
>sp|Q6FRV0|NOG1_CANGA Nucleolar GTP-binding protein 1 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=NOG1 PE=3 SV=1
Length = 645
Score = 363 bits (933), Expect = e-100, Method: Compositional matrix adjust.
Identities = 162/274 (59%), Positives = 216/274 (78%)
Query: 2 VQYNFKKITVVPNGKDIVDIILSRTQRQTPTVVHKGYSITRLRRFYMRKVKYTQQNFFEK 61
+Q ++K I V D++DI+L+RTQR+TPTV+ G+ ITR+R FYMRKVK+T + F EK
Sbjct: 1 MQLSWKDIPTVAPANDMLDIVLNRTQRKTPTVIRPGFKITRIRAFYMRKVKFTAEGFEEK 60
Query: 62 LSTIIDEFPRLDDIHPFYGDLLHVLYNKDHYKLALGQINTARNLISKIAKDYVKLLKYGD 121
I+ FP ++D+HPF+ DL+ LY K+HYK++L ++ A+ L+ ++++DY +LLK+G
Sbjct: 61 FDDILKGFPNINDVHPFHRDLMDTLYEKNHYKISLAAVSRAKTLVEQVSRDYTRLLKFGQ 120
Query: 122 SLYCCKSLEVAALGRMCTVVKRIGPSLAYLEQIRQHMARLPSIDPNTRTILICWYPNVGK 181
SL+ CK L+ AALGRM T+VK++ L YLEQ+RQH+ RLPSIDPNTRT+LIC YPNVGK
Sbjct: 121 SLFQCKQLKRAALGRMATIVKKLKDPLVYLEQVRQHLGRLPSIDPNTRTLLICGYPNVGK 180
Query: 182 SSFMNKITRADVDVQPYAFTTKSLFVGHTDYKYLRYQVIDTPGILDRPFEDHNIIEMCSI 241
SSF+ IT++DV+VQPYAFTTKSL+VGH DYKYLR+Q IDTPGILDRP E+ N IEM SI
Sbjct: 181 SSFLRCITKSDVEVQPYAFTTKSLYVGHFDYKYLRFQAIDTPGILDRPTEEMNNIEMQSI 240
Query: 242 TALAHLRSAVLFFLDISGSCGYSIAQQAALFHSI 275
A+AHLRS V++F+D+S CG+S+ Q LFHSI
Sbjct: 241 YAIAHLRSCVMYFMDLSEQCGFSVEAQVKLFHSI 274
>sp|Q6CM00|NOG1_KLULA Nucleolar GTP-binding protein 1 OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=NOG1 PE=3 SV=1
Length = 643
Score = 362 bits (930), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 160/274 (58%), Positives = 216/274 (78%)
Query: 2 VQYNFKKITVVPNGKDIVDIILSRTQRQTPTVVHKGYSITRLRRFYMRKVKYTQQNFFEK 61
+Q ++K I V D++DI+L+RTQR+TPTV+ G++ITR+R FYMRKVK+T + F EK
Sbjct: 1 MQLSWKDIPTVAPANDLLDIVLNRTQRKTPTVIRPGFNITRIRAFYMRKVKFTGEGFVEK 60
Query: 62 LSTIIDEFPRLDDIHPFYGDLLHVLYNKDHYKLALGQINTARNLISKIAKDYVKLLKYGD 121
I+ FP ++D+HPF+ DL+ LY K+H+K++L ++ A+ L+ ++ +DY +LLK+G
Sbjct: 61 FDDILKGFPNINDVHPFHRDLMDTLYEKNHFKVSLAAVSRAKTLVEQVERDYTRLLKFGQ 120
Query: 122 SLYCCKSLEVAALGRMCTVVKRIGPSLAYLEQIRQHMARLPSIDPNTRTILICWYPNVGK 181
SL+ CK L+ AALGRM T+VK++ L YLEQ+RQH+ R+PSIDPNTRT+LIC YPNVGK
Sbjct: 121 SLFQCKQLKRAALGRMATIVKKLKDPLVYLEQVRQHLGRMPSIDPNTRTLLICGYPNVGK 180
Query: 182 SSFMNKITRADVDVQPYAFTTKSLFVGHTDYKYLRYQVIDTPGILDRPFEDHNIIEMCSI 241
SSF+ IT+ADV+VQPYAFTTKSL+VGH DYKYLR+Q IDTPGILDRP ++ N +EM SI
Sbjct: 181 SSFLRCITKADVEVQPYAFTTKSLYVGHFDYKYLRFQAIDTPGILDRPTDEMNNVEMQSI 240
Query: 242 TALAHLRSAVLFFLDISGSCGYSIAQQAALFHSI 275
A+AHLRS V++F+D+S CG+SI Q LFHSI
Sbjct: 241 YAIAHLRSTVMYFMDLSEQCGFSIEAQVKLFHSI 274
>sp|Q58803|Y1408_METJA Uncharacterized protein MJ1408 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ1408 PE=3 SV=2
Length = 350
Score = 144 bits (364), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 82/271 (30%), Positives = 144/271 (53%), Gaps = 6/271 (2%)
Query: 6 FKKITVVPNGKDIVDIILSRTQRQTPTVVHKGYSITRLRRFYMR-KVKYTQQNFFEKLST 64
FKK+ + +++ L R ++ + K RF KV+ + L
Sbjct: 8 FKKMPTILMPDELMAKALRRGEKVANEMRQKELPWLLKARFVEEHKVRTIASVVADNLQK 67
Query: 65 IIDEFPRLDDIHPFYGDLLHVLYNKDHYKLALGQINTARNLISKIAKDYVKLLKYGDSLY 124
+ID+ P + + FY +++ VL D +K ++G A L+ K+ +Y + ++ +
Sbjct: 68 VIDKTPPVRKLPKFYQEMVEVLVGIDDFKKSMGAFKWASELVRKLGNEYARKIRKARTPQ 127
Query: 125 CCKSLEVAALGRMCTVVKRIGPSLAYLEQIRQHMARLPSIDPNTRTILICWYPNVGKSSF 184
L +GR+ +++++I P +A++ R+ + LP+ + T++I YPNVGKS+
Sbjct: 128 QAGKLRKEFVGRVKSILEQIHPEMAFVAVAREKLKDLPTFK-DLPTVVIAGYPNVGKSTL 186
Query: 185 MNKITRADVDVQPYAFTTKSLFVGHTDYKYLRYQVIDTPGILDRPFEDHNIIEMCSITAL 244
+ K+T ADV++ Y FTTK + VG+ Q++DTPG+LDRP + N IE+ +I AL
Sbjct: 187 LKKLTGADVEINSYPFTTKGINVGYIG----EIQMVDTPGLLDRPLYERNDIELQAILAL 242
Query: 245 AHLRSAVLFFLDISGSCGYSIAQQAALFHSI 275
+L + +LF +D S CGY+I +Q L I
Sbjct: 243 NYLANLILFIIDASEFCGYTIEEQINLLKEI 273
>sp|Q58722|Y1326_METJA Uncharacterized GTP-binding protein MJ1326 OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=MJ1326 PE=3 SV=1
Length = 391
Score = 54.3 bits (129), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 37/57 (64%)
Query: 170 TILICWYPNVGKSSFMNKITRADVDVQPYAFTTKSLFVGHTDYKYLRYQVIDTPGIL 226
T +P+VGKS+ +NK+T A +V YAFTT ++ G +YK + Q++D PGI+
Sbjct: 86 TAAFVGFPSVGKSTLLNKLTNAKSEVGAYAFTTLTIVPGILEYKGAKIQLLDAPGII 142
>sp|P17103|Y1111_HALSA Uncharacterized GTP-binding protein VNG_1111G OS=Halobacterium
salinarum (strain ATCC 700922 / JCM 11081 / NRC-1)
GN=VNG_1111G PE=3 SV=1
Length = 370
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 38/58 (65%)
Query: 170 TILICWYPNVGKSSFMNKITRADVDVQPYAFTTKSLFVGHTDYKYLRYQVIDTPGILD 227
T+ + +P+VGKSS +N +T AD +V Y FTT ++ G +Y+ Q++D PG+++
Sbjct: 63 TVALVGFPSVGKSSLINAMTNADSEVGAYEFTTLNVNPGMLEYRGANIQLLDVPGLIE 120
>sp|B5YEQ1|OBG_DICT6 GTPase obg OS=Dictyoglomus thermophilum (strain ATCC 35947 / DSM
3960 / H-6-12) GN=obg PE=3 SV=1
Length = 435
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 48/80 (60%), Gaps = 5/80 (6%)
Query: 177 PNVGKSSFMNKITRADVDVQPYAFTTKSLFVGHTDYKYLRYQVIDTPGILDRPFEDHNII 236
PN GKS+ ++KI+ A+ ++ PY FTTK+ +G + + + + V D PG+++ E+ +
Sbjct: 167 PNAGKSTLLSKISNANPEIAPYPFTTKTPNLGVVEREDITFTVADIPGLIEGAHENKGMG 226
Query: 237 EMCSITALAHL-RSAVLFFL 255
+ L H+ R+ VL F+
Sbjct: 227 DEF----LRHIERTLVLVFV 242
>sp|Q07UP2|MNME_RHOP5 tRNA modification GTPase MnmE OS=Rhodopseudomonas palustris (strain
BisA53) GN=mnmE PE=3 SV=2
Length = 453
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 75/164 (45%), Gaps = 16/164 (9%)
Query: 81 DLLHVLYNKDHYKLALGQINTARNLISKIAKDYVKLLKYGDSLYCCKSLEVAALGRMCTV 140
DL+H ++ + AL Q+N L+ A+D+ + +L ++ A G +
Sbjct: 132 DLIHADTDR-QRRQALRQLN---GLLGDRARDWRAQIIEAQALIEA-GIDFADEGDVPDD 186
Query: 141 VKRIGPSLAYLEQIRQHMARLPSIDPNTR------TILICWYPNVGKSSFMNKITRADVD 194
+ + P+LA +E + + L + + + I PNVGKS+ MN++ R +V
Sbjct: 187 L--LAPALAKIEALAGEIEALLAAQGRSERLRDGLVVAIVGPPNVGKSTLMNQLARREVA 244
Query: 195 -VQPYAFTTKSLFVGHTDYKYLRYQVIDTPGILDR--PFEDHNI 235
V P+A TT+ + H D VIDT GI D P E +
Sbjct: 245 IVSPHAGTTRDVIEVHLDLDGYPVTVIDTAGIRDSDDPVEQEGV 288
>sp|A5E8G7|MNME_BRASB tRNA modification GTPase MnmE OS=Bradyrhizobium sp. (strain BTAi1 /
ATCC BAA-1182) GN=mnmE PE=3 SV=1
Length = 445
Score = 49.3 bits (116), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 48/101 (47%), Gaps = 9/101 (8%)
Query: 144 IGPSLAYLEQIRQHMARLPSIDPNTR------TILICWYPNVGKSSFMNKITRADVD-VQ 196
I P+LA++ Q+ + + + T++I PN GKS+ MN++ R +V V
Sbjct: 188 IAPALAWIRQLLAEIEEVLAAQGRAERLRDGLTVVIAGPPNAGKSTLMNQLARREVAIVS 247
Query: 197 PYAFTTKSLFVGHTDYKYLRYQVIDTPGI--LDRPFEDHNI 235
P+A TT+ L D VIDT GI D P E +
Sbjct: 248 PHAGTTRDLIEVALDLDGYPVTVIDTAGIRQTDDPVEQEGV 288
>sp|C5CIV1|DER_KOSOT GTPase Der OS=Kosmotoga olearia (strain TBF 19.5.1) GN=der PE=3
SV=1
Length = 442
Score = 49.3 bits (116), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 52/103 (50%), Gaps = 11/103 (10%)
Query: 170 TILICWYPNVGKSSFMNKIT---RADVDVQPYAFTTKSLFVGHTDYKYLRYQVIDTPGIL 226
T+LI PNVGKS+ N++ RA +D QP T+ G +++ ++V+DT G+
Sbjct: 3 TVLIVGRPNVGKSTLFNRLVGGRRAIIDDQPGV--TRDFVFGRVFWQHKSFEVVDTCGLF 60
Query: 227 DRPFEDHNIIE--MCSITALAHLRSAVLFFLDISGSCGYSIAQ 267
D P +IIE M +T LA L L + G G + A
Sbjct: 61 DSP---KDIIEEKMKEVT-LALLSEGDLLLFVVDGRKGLTSAD 99
>sp|P53295|RBG2_YEAST Ribosome-interacting GTPase 2 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RBG2 PE=1 SV=1
Length = 368
Score = 49.3 bits (116), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 167 NTRTILICWYPNVGKSSFMNKITRADVDVQPYAFTTKSLFVGHTDYKYLRYQVIDTPGIL 226
+ R +LI YP+VGKSS + KIT ++ YAFTT + G Y+ Q++D PGI+
Sbjct: 63 DARVVLI-GYPSVGKSSLLGKITTTKSEIAHYAFTTLTSVPGVLKYQGAEIQIVDLPGII 121
>sp|B7IGK8|OBG_THEAB GTPase obg OS=Thermosipho africanus (strain TCF52B) GN=obg PE=3
SV=1
Length = 434
Score = 48.9 bits (115), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 16/104 (15%)
Query: 171 ILICWYPNVGKSSFMNKITRADVDVQPYAFTTKSLFVGHTDYKYLRYQVIDTPGILDRPF 230
+ + YPNVGKSSF++KI+ A + Y FTT +G L++ V D PG++
Sbjct: 165 VGLVGYPNVGKSSFISKISNARPKIANYPFTTTIPNLGVVTVNELQFVVADIPGLIKGAS 224
Query: 231 EDHNI-------IEMCSITALAHLRSAVLFFLDISGSCGYSIAQ 267
+ + +E CS+ +AH+ +DISG G Q
Sbjct: 225 KGAGLGNVFLRHVERCSV--IAHI-------VDISGMEGRDPVQ 259
>sp|B8E0B2|OBG_DICTD GTPase obg OS=Dictyoglomus turgidum (strain Z-1310 / DSM 6724)
GN=obg PE=3 SV=1
Length = 434
Score = 48.5 bits (114), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 48/80 (60%), Gaps = 5/80 (6%)
Query: 177 PNVGKSSFMNKITRADVDVQPYAFTTKSLFVGHTDYKYLRYQVIDTPGILDRPFEDHNII 236
PN GKS+ +++I+ A ++ PY FTTK+ +G + + + + V D PG+++ E+ +
Sbjct: 167 PNAGKSTLLSRISNATPEIAPYPFTTKTPNLGVVEREDITFTVADIPGLIEGAHENKGMG 226
Query: 237 EMCSITALAHL-RSAVLFFL 255
+ L H+ R++VL F+
Sbjct: 227 DEF----LRHIERTSVLVFV 242
>sp|Q3ICZ9|DER_PSEHT GTPase Der OS=Pseudoalteromonas haloplanktis (strain TAC 125)
GN=der PE=3 SV=1
Length = 487
Score = 48.5 bits (114), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 4/104 (3%)
Query: 171 ILICWYPNVGKSSFMNKITRA-DVDVQPYAFTTKSLFVGHTDYKYLRYQVIDTPGILDRP 229
I + PNVGKS+ N++TR D V + T+ G +Y + V+DT GI
Sbjct: 5 IALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQANYDGYEFIVVDTGGI--DG 62
Query: 230 FEDHNIIEMCSITALAHLRSAVLFFLDISGSCGYSIAQQAALFH 273
E+ IEM + LA + ++ FL + G ++A QA H
Sbjct: 63 SEEGIEIEMADQSLLAIEEADIVLFL-VDARVGMTVADQAIANH 105
>sp|B5Y805|OBG_COPPD GTPase obg OS=Coprothermobacter proteolyticus (strain ATCC 35245 /
DSM 5265 / BT) GN=obg PE=3 SV=1
Length = 419
Score = 47.8 bits (112), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 6/97 (6%)
Query: 173 ICWYPNVGKSSFMNKITRADVDVQPYAFTTKSLFVGHTDYKYLRYQVIDTPGILDRPFED 232
+ PN GKSS ++ I++A ++ PY FTT+S +G + V D PG+++ E
Sbjct: 163 LVGLPNAGKSSLISVISKAKPEIAPYPFTTRSPVLGIVKKAEQSFVVSDVPGLIEGAHEG 222
Query: 233 HNIIEMCSITALAHL-RSAVL-FFLDISGSCGYSIAQ 267
+ +T L H+ R+ VL +D + GY Q
Sbjct: 223 KGL----GLTFLRHVERTKVLAIVIDAAAIDGYEPMQ 255
>sp|Q5SHE9|OBG_THET8 GTPase obg OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM
579) GN=obg PE=1 SV=1
Length = 416
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 173 ICWYPNVGKSSFMNKITRADVDVQPYAFTTKSLFVGHTDY-KYLRYQVIDTPGILDRPFE 231
+ YPN GKSS + +TRA + PY FTT S +G + + R+ + D PGI++ E
Sbjct: 162 LVGYPNAGKSSLLAAMTRAHPKIAPYPFTTLSPNLGVVEVSEEERFTLADIPGIIEGASE 221
Query: 232 DHNI 235
+
Sbjct: 222 GKGL 225
>sp|Q72HR4|OBG_THET2 GTPase obg OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 /
DSM 7039) GN=obg PE=3 SV=1
Length = 416
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 173 ICWYPNVGKSSFMNKITRADVDVQPYAFTTKSLFVGHTDY-KYLRYQVIDTPGILDRPFE 231
+ YPN GKSS + +TRA + PY FTT S +G + + R+ + D PGI++ E
Sbjct: 162 LVGYPNAGKSSLLAAMTRAHPKIAPYPFTTLSPNLGVVEVSEEERFTLADIPGIIEGASE 221
Query: 232 DHNI 235
+
Sbjct: 222 GKGL 225
>sp|Q89WP4|MNME_BRAJA tRNA modification GTPase MnmE OS=Bradyrhizobium japonicum (strain
USDA 110) GN=mnmE PE=3 SV=1
Length = 452
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Query: 171 ILICWYPNVGKSSFMNKITRADVD-VQPYAFTTKSLFVGHTDYKYLRYQVIDTPGI--LD 227
+ I PNVGKS+ MN++ R DV V P+A TT+ + D VIDT GI D
Sbjct: 221 VAIAGEPNVGKSTLMNQLARRDVAIVSPHAGTTRDVIEVQLDLDGYPVTVIDTAGIRETD 280
Query: 228 RPFEDHNI 235
P E +
Sbjct: 281 DPVEQEGV 288
>sp|Q11Z03|OBG_CYTH3 GTPase obg OS=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB
9469) GN=obg PE=3 SV=1
Length = 337
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 48/85 (56%), Gaps = 6/85 (7%)
Query: 173 ICWYPNVGKSSFMNKITRADVDVQPYAFTTKSLFVGHTDYK-YLRYQVIDTPGILDRPFE 231
+ +PN GKS+ ++K++ A ++ YAFTT + +G Y+ Y + + D PGI++ E
Sbjct: 167 LVGFPNAGKSTLLSKVSAAKPEIADYAFTTLAPNLGVVKYRDYRSFIMADIPGIIEGAAE 226
Query: 232 DHNIIEMCSITALAHL-RSAVLFFL 255
+ I L H+ R+++L FL
Sbjct: 227 GKGL----GIRFLRHIERNSILLFL 247
>sp|B0SRT7|OBG_LEPBP GTPase obg OS=Leptospira biflexa serovar Patoc (strain Patoc 1 /
ATCC 23582 / Paris) GN=obg PE=3 SV=1
Length = 341
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 42/90 (46%), Gaps = 8/90 (8%)
Query: 171 ILICWYPNVGKSSFMNKITRADVDVQPYAFTTKS--LFVGHTDYKYLRYQVIDTPGILDR 228
I I PN GKS+ + KIT A + YAFTT S L V H RY V D PGI++
Sbjct: 163 IGIVGLPNAGKSTLLAKITHAHPKIAGYAFTTLSPNLGVVHRHEDLFRYTVADIPGIIEG 222
Query: 229 PFEDHNIIEMCSITALAHLR--SAVLFFLD 256
+ I+ L H+ +LF D
Sbjct: 223 ASRGVGL----GISFLKHIERVQGILFLFD 248
>sp|B0S9A3|OBG_LEPBA GTPase obg OS=Leptospira biflexa serovar Patoc (strain Patoc 1 /
Ames) GN=obg PE=3 SV=1
Length = 341
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 42/90 (46%), Gaps = 8/90 (8%)
Query: 171 ILICWYPNVGKSSFMNKITRADVDVQPYAFTTKS--LFVGHTDYKYLRYQVIDTPGILDR 228
I I PN GKS+ + KIT A + YAFTT S L V H RY V D PGI++
Sbjct: 163 IGIVGLPNAGKSTLLAKITHAHPKIAGYAFTTLSPNLGVVHRHEDLFRYTVADIPGIIEG 222
Query: 229 PFEDHNIIEMCSITALAHLR--SAVLFFLD 256
+ I+ L H+ +LF D
Sbjct: 223 ASRGVGL----GISFLKHIERVQGILFLFD 248
>sp|A4YJT5|MNME_BRASO tRNA modification GTPase MnmE OS=Bradyrhizobium sp. (strain ORS278)
GN=mnmE PE=3 SV=1
Length = 444
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Query: 170 TILICWYPNVGKSSFMNKITRADVD-VQPYAFTTKSLFVGHTDYKYLRYQVIDTPGI--L 226
T++I PN GKS+ MN++ R +V V P A TT+ L D VIDT GI
Sbjct: 220 TVVIAGPPNAGKSTLMNQLARREVAIVSPQAGTTRDLIEVQLDLDGYPVTVIDTAGIRET 279
Query: 227 DRPFEDHNI 235
D P E +
Sbjct: 280 DDPVEQEGV 288
>sp|Q2NCX8|OBG_ERYLH GTPase obg OS=Erythrobacter litoralis (strain HTCC2594) GN=obg PE=3
SV=1
Length = 352
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 16/91 (17%)
Query: 177 PNVGKSSFMNKITRADVDVQPYAFTTKSLFVGHTDYKYLRYQVIDTPGILDRPFEDHNI- 235
PN GKS+F+N ++ A V YAFTT +G ++K + + D PG+++ E I
Sbjct: 168 PNAGKSTFINAVSNAKAKVGHYAFTTLVPKLGVVNHKGREFVLADIPGLIEGAAEGAGIG 227
Query: 236 ------IEMCSITALAHLRSAVLFFLDISGS 260
IE C + L HL +DISG
Sbjct: 228 DRFLGHIERCRV--LIHL-------VDISGE 249
>sp|Q1GSF4|OBG_SPHAL GTPase obg OS=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877
/ RB2256) GN=obg PE=3 SV=1
Length = 348
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 9/81 (11%)
Query: 177 PNVGKSSFMNKITRADVDVQPYAFTTKSLFVGHTDYKYLRYQVIDTPGILDRPFEDHNI- 235
PN GKS+F+N +T A V YAFTT +G +K + + D PG+++ E +
Sbjct: 169 PNAGKSTFINAVTNAQAKVGAYAFTTLRPQLGVVSHKGHEFVIADIPGLIEGAAEGAGVG 228
Query: 236 ------IEMCSITALAHLRSA 250
IE C + L HL A
Sbjct: 229 DRFLGHIERCRV--LLHLVDA 247
>sp|Q54HP3|DRG1_DICDI Developmentally-regulated GTP-binding protein 1 homolog
OS=Dictyostelium discoideum GN=drg1 PE=3 SV=1
Length = 370
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 33/52 (63%)
Query: 176 YPNVGKSSFMNKITRADVDVQPYAFTTKSLFVGHTDYKYLRYQVIDTPGILD 227
+P+VGKS+ + K+T +V Y FTT + G +YK + Q++D PGI++
Sbjct: 72 FPSVGKSTLLTKLTGTSSEVASYEFTTLTCIPGVINYKGAKIQLLDLPGIIE 123
>sp|Q54WT4|DRG2_DICDI Developmentally-regulated GTP-binding protein 2 homolog
OS=Dictyostelium discoideum GN=drg2 PE=3 SV=1
Length = 364
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 44/90 (48%), Gaps = 3/90 (3%)
Query: 167 NTRTILICWYPNVGKSSFMNKITRADVDVQPYAFTTKSLFVGHTDYKYLRYQVIDTPGIL 226
+ R LI +P+VGKS+ + K+T Y FTT + G +K R Q++DTPGI+
Sbjct: 62 DARVALI-GFPSVGKSTILTKLTETKSLAAAYEFTTLTCIPGVIQHKGARIQLLDTPGII 120
Query: 227 DRPFEDHNIIEMCSITALAHLRSAVLFFLD 256
+ + + A+A +L LD
Sbjct: 121 EGASQGRG--RGRQVIAVARTADLILMMLD 148
>sp|Q1QRZ0|MNME_NITHX tRNA modification GTPase MnmE OS=Nitrobacter hamburgensis (strain
X14 / DSM 10229) GN=mnmE PE=3 SV=1
Length = 457
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 44/98 (44%), Gaps = 6/98 (6%)
Query: 170 TILICWYPNVGKSSFMNKITRADVD-VQPYAFTTKSLFVGHTDYKYLRYQVIDTPGI--L 226
T+ I PN GKS+ +N++ R + V PYA TT+ + H D +IDT GI
Sbjct: 220 TVAIAGPPNAGKSTLLNRLARREAAIVSPYAGTTRDVIEVHLDLDGYPVTLIDTAGIRET 279
Query: 227 DRPFEDHNIIEMCSITALAHLRSAVLFFLDISGSCGYS 264
D P E + A A L VL+ D G S
Sbjct: 280 DDPVEQEGVRRARDRAASADL---VLWLADDDNGVGPS 314
>sp|Q21CM0|MNME_RHOPB tRNA modification GTPase MnmE OS=Rhodopseudomonas palustris (strain
BisB18) GN=mnmE PE=3 SV=1
Length = 449
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 45/89 (50%), Gaps = 6/89 (6%)
Query: 171 ILICWYPNVGKSSFMNKITRADVD-VQPYAFTTKSLFVGHTDYKYLRYQVIDTPGILDR- 228
+ I PNVGKS+ MN++ R +V V P+A TT+ + H D VIDT GI +
Sbjct: 221 VAITGPPNVGKSTLMNQLARREVAIVSPHAGTTRDIIEVHLDLDGYPVTVIDTAGIREAI 280
Query: 229 -PFEDHNIIEMCSITALAHLRSAVLFFLD 256
P E + S A A LR L+ +D
Sbjct: 281 DPVEQEGVRRARSRAAEADLR---LWLVD 306
>sp|Q58D56|DRG2_BOVIN Developmentally-regulated GTP-binding protein 2 OS=Bos taurus
GN=DRG2 PE=2 SV=1
Length = 364
Score = 45.8 bits (107), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 3/92 (3%)
Query: 167 NTRTILICWYPNVGKSSFMNKITRADVDVQPYAFTTKSLFVGHTDYKYLRYQVIDTPGIL 226
+ R LI +P+VGKS+F++ +T + Y FTT + G +YK Q++D PGI+
Sbjct: 62 DARVALI-GFPSVGKSTFLSLMTSTASEAASYEFTTLTCIPGVIEYKGANIQLLDLPGII 120
Query: 227 DRPFEDHNIIEMCSITALAHLRSAVLFFLDIS 258
+ + + A+A V+ LD +
Sbjct: 121 EGAAQGKG--RGRQVIAVARTADVVIMMLDAT 150
>sp|Q057R5|ERA_BUCCC GTPase Era OS=Buchnera aphidicola subsp. Cinara cedri (strain Cc)
GN=era PE=3 SV=1
Length = 297
Score = 45.8 bits (107), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 51/90 (56%), Gaps = 10/90 (11%)
Query: 171 ILICWYPNVGKSSFMNKITRADVDV---QPYAFTTKSLFVGHTDYKYLRYQVIDTPGILD 227
I+I NVGKS+ +NK+ ++++ + +P TT+ +G YK ++++ D+PG+ D
Sbjct: 10 IIIVGRTNVGKSTLLNKLIKSNISIISRKPN--TTQKHIIGIYTYKLFQFEIFDSPGLQD 67
Query: 228 RPFEDHNIIEMCSITALAHL--RSAVLFFL 255
+ HNIIE I +L S ++ FL
Sbjct: 68 KY---HNIIEKKKIRDTFNLINESDIIIFL 94
>sp|Q9QXB9|DRG2_MOUSE Developmentally-regulated GTP-binding protein 2 OS=Mus musculus
GN=Drg2 PE=1 SV=1
Length = 364
Score = 45.8 bits (107), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 3/92 (3%)
Query: 167 NTRTILICWYPNVGKSSFMNKITRADVDVQPYAFTTKSLFVGHTDYKYLRYQVIDTPGIL 226
+ R LI +P+VGKS+F++ +T + Y FTT + G +YK Q++D PGI+
Sbjct: 62 DARVALI-GFPSVGKSTFLSLMTSTASEAASYEFTTLTCIPGVIEYKGANIQLLDLPGII 120
Query: 227 DRPFEDHNIIEMCSITALAHLRSAVLFFLDIS 258
+ + + A+A V+ LD +
Sbjct: 121 EGAAQGRG--RGRQVIAVARTADVVVMMLDAT 150
>sp|B0BC53|OBG_CHLTB GTPase obg OS=Chlamydia trachomatis serovar L2b (strain
UCH-1/proctitis) GN=obg PE=3 SV=1
Length = 335
Score = 45.8 bits (107), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 50/103 (48%), Gaps = 10/103 (9%)
Query: 171 ILICWYPNVGKSSFMNKITRADVDVQPYAFTTKSLFVGHTDYKYLRYQ----VIDTPGIL 226
I + +PN GKS+ N + R +V V Y FTT +G + + YQ + D PGI+
Sbjct: 161 IGLVGFPNAGKSTLFNTLARTEVKVGAYPFTTLHPSLGLVHQEGMLYQKTWIMADIPGII 220
Query: 227 DRPFEDHNIIEMCSITALAHLRSA--VLFFLDISGSCGYSIAQ 267
+ ++ + + L H+ +LF +DISG +S Q
Sbjct: 221 EGASQNRGL----GLDFLRHIERTRLLLFVIDISGIERHSPEQ 259
>sp|B0B7Y8|OBG_CHLT2 GTPase obg OS=Chlamydia trachomatis serovar L2 (strain 434/Bu /
ATCC VR-902B) GN=obg PE=3 SV=1
Length = 335
Score = 45.8 bits (107), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 50/103 (48%), Gaps = 10/103 (9%)
Query: 171 ILICWYPNVGKSSFMNKITRADVDVQPYAFTTKSLFVGHTDYKYLRYQ----VIDTPGIL 226
I + +PN GKS+ N + R +V V Y FTT +G + + YQ + D PGI+
Sbjct: 161 IGLVGFPNAGKSTLFNTLARTEVKVGAYPFTTLHPSLGLVHQEGMLYQKTWIMADIPGII 220
Query: 227 DRPFEDHNIIEMCSITALAHLRSA--VLFFLDISGSCGYSIAQ 267
+ ++ + + L H+ +LF +DISG +S Q
Sbjct: 221 EGASQNRGL----GLDFLRHIERTRLLLFVIDISGIERHSPEQ 259
>sp|O84423|OBG_CHLTR GTPase obg OS=Chlamydia trachomatis (strain D/UW-3/Cx) GN=obg PE=3
SV=1
Length = 335
Score = 45.4 bits (106), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 50/103 (48%), Gaps = 10/103 (9%)
Query: 171 ILICWYPNVGKSSFMNKITRADVDVQPYAFTTKSLFVGHTDYKYLRYQ----VIDTPGIL 226
I + +PN GKS+ N + R +V V Y FTT +G + + YQ + D PGI+
Sbjct: 161 IGLVGFPNAGKSTLFNTLARTEVKVGAYPFTTLHPSLGLVHQEGMLYQKPWIMADIPGII 220
Query: 227 DRPFEDHNIIEMCSITALAHLRSA--VLFFLDISGSCGYSIAQ 267
+ ++ + + L H+ +LF +DISG +S Q
Sbjct: 221 EGASQNRGL----GLDFLRHIERTRLLLFVIDISGIERHSPEQ 259
>sp|Q3KLT5|OBG_CHLTA GTPase obg OS=Chlamydia trachomatis serovar A (strain HAR-13 / ATCC
VR-571B) GN=obg PE=3 SV=1
Length = 335
Score = 45.4 bits (106), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 50/103 (48%), Gaps = 10/103 (9%)
Query: 171 ILICWYPNVGKSSFMNKITRADVDVQPYAFTTKSLFVGHTDYKYLRYQ----VIDTPGIL 226
I + +PN GKS+ N + R +V V Y FTT +G + + YQ + D PGI+
Sbjct: 161 IGLVGFPNAGKSTLFNTLARTEVKVGAYPFTTLHPSLGLVHQEGMLYQKPWIMADIPGII 220
Query: 227 DRPFEDHNIIEMCSITALAHLRSA--VLFFLDISGSCGYSIAQ 267
+ ++ + + L H+ +LF +DISG +S Q
Sbjct: 221 EGASQNRGL----GLDFLRHIERTRLLLFVIDISGIERHSPEQ 259
>sp|P39729|RBG1_YEAST Ribosome-interacting GTPase 1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RBG1 PE=1 SV=1
Length = 369
Score = 45.4 bits (106), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 32/52 (61%)
Query: 176 YPNVGKSSFMNKITRADVDVQPYAFTTKSLFVGHTDYKYLRYQVIDTPGILD 227
+P+VGKS+ ++K+T + + Y FTT G YK + Q++D PGI+D
Sbjct: 73 FPSVGKSTLLSKLTGTESEAAEYEFTTLVTVPGVIRYKGAKIQMLDLPGIID 124
>sp|Q9LQK0|DRG1_ARATH Developmentally regulated G-protein 1 OS=Arabidopsis thaliana
GN=DRG1 PE=1 SV=1
Length = 399
Score = 45.4 bits (106), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 44/93 (47%), Gaps = 2/93 (2%)
Query: 171 ILICWYPNVGKSSFMNKITRADVDVQPYAFTTKSLFVGHTDYKYLRYQVIDTPGILDRPF 230
+ + +P+VGKS+ + +T + Y FTT + G Y + Q++D PGI++
Sbjct: 65 VALIGFPSVGKSTLLTMLTGTHSEAASYEFTTLTCIPGVIHYNDTKIQLLDLPGIIEGAS 124
Query: 231 EDHNIIEMCSITALAHLRSAVLFFLDISGSCGY 263
E + A+A VL LD S S G+
Sbjct: 125 EGKG--RGRQVIAVAKSSDLVLMVLDASKSEGH 155
>sp|A4XHX9|DER_CALS8 GTPase Der OS=Caldicellulosiruptor saccharolyticus (strain ATCC
43494 / DSM 8903) GN=der PE=3 SV=2
Length = 439
Score = 45.4 bits (106), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 53/103 (51%), Gaps = 9/103 (8%)
Query: 170 TILICWYPNVGKSSFMNKIT---RADVDVQPYAFTTKSLFVGHTDYKYLRYQVIDTPGIL 226
T+ I PNVGKS+ N++ RA VD P T+ VG T+++ + + VIDT GI
Sbjct: 4 TVAIVGRPNVGKSTLFNRLIGERRAIVDDTP--GITRDRIVGETEWRGITFNVIDTGGI- 60
Query: 227 DRPF-EDHNIIEMCSITALAHLRSAVLFFLDISGSCGYSIAQQ 268
P+ ED + +M A S V+ F+ + G G + A +
Sbjct: 61 -EPYSEDIILKQMRRQAQFAIDMSDVIIFM-VDGKTGLTDADR 101
>sp|P55039|DRG2_HUMAN Developmentally-regulated GTP-binding protein 2 OS=Homo sapiens
GN=DRG2 PE=1 SV=1
Length = 364
Score = 45.4 bits (106), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 46/92 (50%), Gaps = 3/92 (3%)
Query: 167 NTRTILICWYPNVGKSSFMNKITRADVDVQPYAFTTKSLFVGHTDYKYLRYQVIDTPGIL 226
+ R LI +P+VGKS+F++ +T + Y FTT + G +YK Q++D PGI+
Sbjct: 62 DARVALI-GFPSVGKSTFLSLMTSTASEAASYEFTTLTCIPGVIEYKGANIQLLDLPGII 120
Query: 227 DRPFEDHNIIEMCSITALAHLRSAVLFFLDIS 258
+ + + A+A ++ LD +
Sbjct: 121 EGAAQGKG--RGRQVIAVARTADVIIMMLDAT 150
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.326 0.140 0.421
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 99,047,826
Number of Sequences: 539616
Number of extensions: 3970435
Number of successful extensions: 16166
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 263
Number of HSP's successfully gapped in prelim test: 1144
Number of HSP's that attempted gapping in prelim test: 15388
Number of HSP's gapped (non-prelim): 1777
length of query: 275
length of database: 191,569,459
effective HSP length: 116
effective length of query: 159
effective length of database: 128,974,003
effective search space: 20506866477
effective search space used: 20506866477
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 60 (27.7 bits)