Query 035879
Match_columns 356
No_of_seqs 209 out of 1263
Neff 8.0
Searched_HMMs 29240
Date Mon Mar 25 12:06:16 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/035879.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/035879hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1gp6_A Leucoanthocyanidin diox 100.0 2.6E-83 9E-88 618.6 28.2 334 9-344 3-350 (356)
2 1w9y_A 1-aminocyclopropane-1-c 100.0 1.5E-77 5.3E-82 570.0 22.8 298 46-351 2-306 (319)
3 3oox_A Putative 2OG-Fe(II) oxy 100.0 5.9E-76 2E-80 558.4 27.1 291 46-339 5-309 (312)
4 1odm_A Isopenicillin N synthas 100.0 9E-72 3.1E-76 533.6 26.6 284 45-340 6-325 (331)
5 1dcs_A Deacetoxycephalosporin 100.0 7.2E-73 2.5E-77 536.6 18.5 279 46-341 3-307 (311)
6 3on7_A Oxidoreductase, iron/as 100.0 1.8E-67 6.1E-72 492.4 24.1 260 46-339 2-277 (280)
7 3dkq_A PKHD-type hydroxylase S 94.8 0.063 2.2E-06 48.1 7.3 104 180-301 75-194 (243)
8 2rg4_A Uncharacterized protein 93.8 0.46 1.6E-05 41.6 10.5 43 250-304 166-209 (216)
9 2hbt_A EGL nine homolog 1; pro 88.7 0.68 2.3E-05 41.3 6.1 183 66-301 16-212 (247)
10 3itq_A Prolyl 4-hydroxylase, a 81.9 3.5 0.00012 35.9 7.1 104 179-302 94-212 (216)
11 2jig_A Prolyl-4 hydroxylase; h 78.7 2.1 7.3E-05 37.2 4.7 89 205-303 99-218 (224)
12 2iuw_A Alkylated repair protei 78.0 3.6 0.00012 36.4 6.0 84 204-300 126-228 (238)
13 3s57_A Alpha-ketoglutarate-dep 76.6 3.2 0.00011 35.7 5.2 81 204-299 100-200 (204)
14 3i3q_A Alpha-ketoglutarate-dep 68.2 5.7 0.0002 34.4 4.7 80 204-300 105-201 (211)
15 3tht_A Alkylated DNA repair pr 64.8 5.1 0.00017 37.5 4.0 94 203-304 197-315 (345)
16 2dbn_A Hypothetical protein YB 59.4 6.8 0.00023 37.9 3.8 54 45-103 98-151 (461)
17 3o2g_A Gamma-butyrobetaine dio 53.1 5.8 0.0002 37.6 2.2 52 47-104 122-173 (388)
18 1otj_A Alpha-ketoglutarate-dep 39.9 26 0.00088 31.2 4.2 51 45-102 15-65 (283)
19 4ay7_A Methylcobalamin\: coenz 37.7 65 0.0022 29.5 6.8 39 65-103 306-348 (348)
20 2da7_A Zinc finger homeobox pr 35.4 17 0.00057 25.7 1.7 41 160-200 14-54 (71)
21 1oih_A Putative alkylsulfatase 31.5 41 0.0014 30.2 4.2 52 45-103 25-77 (301)
22 2opi_A L-fuculose-1-phosphate 30.1 27 0.00094 29.8 2.6 36 47-86 125-160 (212)
23 3kt7_A PKHD-type hydroxylase T 25.9 1.7E+02 0.0057 29.4 7.6 103 178-301 104-227 (633)
24 3ghf_A Septum site-determining 25.3 66 0.0022 24.9 3.8 36 50-89 51-86 (120)
25 1e5r_A Proline oxidase; oxidor 25.3 54 0.0018 29.7 3.7 65 222-300 103-175 (290)
26 2x4k_A 4-oxalocrotonate tautom 25.2 59 0.002 21.0 3.1 24 171-194 17-40 (63)
27 3rcq_A Aspartyl/asparaginyl be 24.7 35 0.0012 29.1 2.2 67 222-305 114-187 (197)
28 3pvj_A Alpha-ketoglutarate-dep 23.7 59 0.002 28.9 3.7 51 45-102 13-63 (277)
29 2fk5_A Fuculose-1-phosphate al 23.2 46 0.0016 28.1 2.7 36 47-86 117-153 (200)
30 2do1_A Nuclear protein HCC-1; 22.9 66 0.0023 21.4 2.9 32 65-99 14-45 (55)
31 1e4c_P L-fuculose 1-phosphate 22.6 41 0.0014 28.7 2.3 36 47-86 122-157 (215)
32 1pvt_A Sugar-phosphate aldolas 21.1 55 0.0019 28.3 2.9 37 46-86 160-196 (238)
33 3abf_A 4-oxalocrotonate tautom 20.7 86 0.0029 20.4 3.2 23 172-194 16-38 (64)
No 1
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A*
Probab=100.00 E-value=2.6e-83 Score=618.58 Aligned_cols=334 Identities=31% Similarity=0.597 Sum_probs=300.2
Q ss_pred CchhhHHhhhCCCCCCCCCCCCCCCCCCccccC---CC---CCCCCCeeeCCCCCCCChh--HHHHHHHHHHHHhcceEE
Q 035879 9 SVPCVQELAKNPTLVVPPRYIRPDQDATTIISD---DA---LVSKLPVIDMQSLLSEESM--DSELAKLDSACKEWGFFQ 80 (356)
Q Consensus 9 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~---~~---~~~~iPvIDls~l~~~d~~--~~~~~~l~~A~~~~Gff~ 80 (356)
++++||+|+++|+.+||++|++|+++++.. .. .. ...+||||||+.+.+++.. .+.+++|.+||++|||||
T Consensus 3 ~~~~v~~l~~~~~~~vP~~~~~p~~~~~~~-~~~~~~~~~~~~~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFF~ 81 (356)
T 1gp6_A 3 AVERVESLAKSGIISIPKEYIRPKEELESI-NDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENCIEELKKASLDWGVMH 81 (356)
T ss_dssp CCCCHHHHHHTTCSSCCGGGSCCHHHHTTC-CCHHHHHHCCCSCCCCEEECTTTTCSCHHHHHHHHHHHHHHHHHTSEEE
T ss_pred CcccHHHHHhcCCCCCCHHhcCCchhcccc-cccccccccccCCCCCEEEchhccCCChHHHHHHHHHHHHHHHhCCEEE
Confidence 567799999999999999999998766543 11 01 1247999999999765542 236699999999999999
Q ss_pred EEcCCCCHHHHHHHHHHHHHHccCCHHHHhhhcCCC--CCccccccCcccCccccCCcccccccccCCccCCCCCCCCCC
Q 035879 81 MVNHGVSSAFLEKVKKEVHEFFNLSMEEKKKYWQSP--EDLEGFGQAFVVSEEQKLDWGDLFFMTTLPVHLRKPHLFPKL 158 (356)
Q Consensus 81 l~nhGi~~~l~~~~~~~~~~fF~lP~e~K~~~~~~~--~~~~Gy~~~~~~~~~~~~d~~e~~~~~~~p~~~~~~~~wP~~ 158 (356)
|+||||+.++++++++.+++||+||.|+|+++.... ..++||+........+..||+|.|+++..|.....+|.||+.
T Consensus 82 v~nHGi~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~~~Gy~~~~~~~~~~~~d~kE~~~~~~~p~~~~~~~~wP~~ 161 (356)
T 1gp6_A 82 LINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKT 161 (356)
T ss_dssp EESCSCCHHHHHHHHHHHHHHHTSCHHHHGGGBCBGGGTBCSEEECCCCCSTTCCCCSCEEEEEEEESGGGCCGGGSCCS
T ss_pred EeCCCCCHHHHHHHHHHHHHHHCCCHHHHHhhcccccccCccccCcCcccCCCCCCChhheeeeecCCccccccccCCCc
Confidence 999999999999999999999999999999998754 368999876655556788999999988766544678999999
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHhhhc---CCceeEEeeecCCCCCCCCcccccCcccCCceEEE
Q 035879 159 PLPLRDTLEVYSMELKSLAMNLILKMGKVLNIKDEEMKNFFE---NGLQVMRMNYYPPCPQPEKVVGLTPHSDGPALTIL 235 (356)
Q Consensus 159 ~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~---~~~~~lr~~~Ypp~~~~~~~~g~~~HtD~g~lTlL 235 (356)
+++||+.+++|+++|.+|+.+||++|+++||+++++|.+.+. .+.+.||++|||||++++..+|+++|||+|+||||
T Consensus 162 ~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~~lrl~~YPp~~~~~~~~g~~~HtD~g~lTlL 241 (356)
T 1gp6_A 162 PSDYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFI 241 (356)
T ss_dssp STTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTHHHHHTTHHHHCEEEEEEEEECCCSSTTTCCSEEEECCCSSEEEE
T ss_pred chhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcccCCccceeeeeecCCCCCcccccCcCCccCCCeEEEE
Confidence 999999999999999999999999999999999999999887 47789999999999988889999999999999999
Q ss_pred EecCCCCccccccCCceEeccCCCCeEEEEhhhHHHHHhCCeecccccccccCCCCCccceeeeeecCCCe-eEecCCcc
Q 035879 236 LQINEVEGLQIKKDGVWIPVTPLPNAFIVNIGDIMEIITNGKYRSIEHRVTVNSVQERLSVGTFYYTRYDG-EVYPASSL 314 (356)
Q Consensus 236 ~q~~~~~GLqV~~~g~W~~V~p~~g~~vVniGd~Le~~TnG~~kst~HRVv~~~~~~R~Si~~F~~P~~d~-~i~pl~~~ 314 (356)
+| ++++||||+++|+|++|+|.||++||||||+||+||||+||||.|||+++++.+|||++||++|+.|+ +|.|+++|
T Consensus 242 ~q-d~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~l~~~TnG~~kS~~HRVv~~~~~~R~Sia~F~~P~~d~~~i~pl~~~ 320 (356)
T 1gp6_A 242 LH-NMVPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIVLKPLPEM 320 (356)
T ss_dssp EE-CSCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEECCCSSCCEEEEEEEEECCTTTCEECCCGGG
T ss_pred EE-cCCCCeEEecCCcEEECcCCCCeEEEEeccHHHHhcCCEeeccCceecCCCCCCEEEEEEeecCCCCCcEEeCChhh
Confidence 99 67999999999999999999999999999999999999999999999998888999999999999999 99999999
Q ss_pred cCCCCCCCCcccCHHHHHHHHHhhhcCCCc
Q 035879 315 ISEKAPALFRRLTVEEYLSGRFARELRGKS 344 (356)
Q Consensus 315 ~~~~~p~~y~~~~~~e~~~~~~~~~~~g~~ 344 (356)
+++++|++|+++|++||+..+++.+++|+.
T Consensus 321 ~~~~~p~~y~~~t~~eyl~~~~~~~~d~~~ 350 (356)
T 1gp6_A 321 VSVESPAKFPPRTFAQHIEHKLFGKEQEEL 350 (356)
T ss_dssp CCSSSCCSSCCEEHHHHHHHHHHHHHHHHC
T ss_pred cCCCCCccCCCccHHHHHHHHHHhccCcch
Confidence 999899999999999999999999887765
No 2
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X
Probab=100.00 E-value=1.5e-77 Score=570.01 Aligned_cols=298 Identities=28% Similarity=0.599 Sum_probs=264.2
Q ss_pred CCCCeeeCCCCCCCChhHHHHHHHHHHHHhcceEEEEcCCCCHHHHHHHHHHHHHHccCCHHHHhhhcCCCCCccccccC
Q 035879 46 SKLPVIDMQSLLSEESMDSELAKLDSACKEWGFFQMVNHGVSSAFLEKVKKEVHEFFNLSMEEKKKYWQSPEDLEGFGQA 125 (356)
Q Consensus 46 ~~iPvIDls~l~~~d~~~~~~~~l~~A~~~~Gff~l~nhGi~~~l~~~~~~~~~~fF~lP~e~K~~~~~~~~~~~Gy~~~ 125 (356)
++||||||+.+.. +...+++++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++... .+||+..
T Consensus 2 ~~iPvIDls~l~~-~~~~~~~~~l~~A~~~~GFF~v~nHGi~~~l~~~~~~~~~~FF~lP~e~K~~~~~~---~~Gy~~~ 77 (319)
T 1w9y_A 2 ENFPIISLDKVNG-VERAATMEMIKDACENWGFFELVNHGIPREVMDTVEKMTKGHYKKCMEQRFKELVA---SKALEGV 77 (319)
T ss_dssp CCCCEEEGGGGGS-TTHHHHHHHHHHHHHHTSEEEEESCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHTTC
T ss_pred CCCCEEECcccCc-ccHHHHHHHHHHHHHhCCEEEEEcCCCCHHHHHHHHHHHHHHHcCCHHHHhhhccC---CCCCCcc
Confidence 4799999999853 22234679999999999999999999999999999999999999999999998642 3588654
Q ss_pred cccCccccCCcccccccccCCccCCCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHhhhcC---C
Q 035879 126 FVVSEEQKLDWGDLFFMTTLPVHLRKPHLFPKLPLPLRDTLEVYSMELKSLAMNLILKMGKVLNIKDEEMKNFFEN---G 202 (356)
Q Consensus 126 ~~~~~~~~~d~~e~~~~~~~p~~~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~---~ 202 (356)
. .+.+..||+|.|++...|. ..+|.||+.+++||+.+++|+++|.+|+.+||++|+++||+++++|.+.+.. +
T Consensus 78 ~--~e~~~~d~ke~~~~~~~p~--~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~ 153 (319)
T 1w9y_A 78 Q--AEVTDMDWESTFFLKHLPI--SNISEVPDLDEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKGP 153 (319)
T ss_dssp C--CCGGGCCCCEEEEEEEESC--CGGGGCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTTHHHHHHHTTTCC
T ss_pred c--ccCCCCChhhheeeecCCc--ccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcCcCCc
Confidence 2 3356789999999876553 3478999999999999999999999999999999999999999999998873 5
Q ss_pred ceeEEeeecCCCCCCCCcccccCcccCCceEEEEecCCCCccccccCCceEeccCCCCeEEEEhhhHHHHHhCCeecccc
Q 035879 203 LQVMRMNYYPPCPQPEKVVGLTPHSDGPALTILLQINEVEGLQIKKDGVWIPVTPLPNAFIVNIGDIMEIITNGKYRSIE 282 (356)
Q Consensus 203 ~~~lr~~~Ypp~~~~~~~~g~~~HtD~g~lTlL~q~~~~~GLqV~~~g~W~~V~p~~g~~vVniGd~Le~~TnG~~kst~ 282 (356)
.+.||++|||||++++..+|+++|||+|+||||+||++++||||+++|+|++|+|.||++||||||+||+||||+||||.
T Consensus 154 ~~~lrl~~YPp~~~~~~~~g~~~HtD~g~lTlL~qd~~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~l~~~SnG~~kS~~ 233 (319)
T 1w9y_A 154 NFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVVNLGDQLEVITNGKYKSVM 233 (319)
T ss_dssp EEEEEEEECCCCSCGGGGSSCCCBCCSSSEEEEEESSSCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTTTSSCCCC
T ss_pred cceeEEEecCCCcccccccccccccCCCceEEEEecCCCCeeeEeeCCeEEEcccCCCcEEEEhHHHHHHHhCCeeeccc
Confidence 67899999999999888899999999999999999557999999999999999999999999999999999999999999
Q ss_pred cccccCCCCCccceeeeeecCCCeeEecCCcccCCC---CCCCCcccCHHHHHHHHHhhhcCCCcc-chhhcc
Q 035879 283 HRVTVNSVQERLSVGTFYYTRYDGEVYPASSLISEK---APALFRRLTVEEYLSGRFARELRGKSY-LDVLRI 351 (356)
Q Consensus 283 HRVv~~~~~~R~Si~~F~~P~~d~~i~pl~~~~~~~---~p~~y~~~~~~e~~~~~~~~~~~g~~~-~~~~~~ 351 (356)
|||+++++++|||++||++|+.|++|.|+++|++++ +|++|+++|++||+..+++..+.|+.. ++.+|+
T Consensus 234 HRVv~~~~~~R~Sia~F~~p~~d~~i~pl~~l~~~~~~~~p~~Y~~~t~~ey~~~~~~~~~~~~~~~~~~~~~ 306 (319)
T 1w9y_A 234 HRVIAQKDGARMSLASFYNPGSDAVIYPAPALVEKEAEENKQVYPKFVFDDYMKLYAGLKFQAKEPRFEAMKA 306 (319)
T ss_dssp EEECCCSSSCCEEEEEEEECCTTCEECCCGGGC--------CCCCCEEHHHHHHTTTTTTCSSHHHHHHHHHH
T ss_pred ceecCCCCCCceEEEEEecCCCCCeEeCchhhcCcccccCccccCcEeHHHHHHHHHhhhcCcchhHHHHHHH
Confidence 999998888999999999999999999999999887 599999999999999999999988864 677765
No 3
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15}
Probab=100.00 E-value=5.9e-76 Score=558.37 Aligned_cols=291 Identities=22% Similarity=0.373 Sum_probs=257.3
Q ss_pred CCCCeeeCCCCCCCChhHHHHHHHHHHHHhcceEEEEcCCCCHHHHHHHHHHHHHHccCCHHHHhhhcCCCCCccccccC
Q 035879 46 SKLPVIDMQSLLSEESMDSELAKLDSACKEWGFFQMVNHGVSSAFLEKVKKEVHEFFNLSMEEKKKYWQSPEDLEGFGQA 125 (356)
Q Consensus 46 ~~iPvIDls~l~~~d~~~~~~~~l~~A~~~~Gff~l~nhGi~~~l~~~~~~~~~~fF~lP~e~K~~~~~~~~~~~Gy~~~ 125 (356)
++||||||+.+.+ +. ++.+++|++||++||||||+||||+.++++++++.+++||+||.|+|+++.......+||...
T Consensus 5 ~~iPvIDls~~~~-~~-~~~~~~l~~A~~~~GFf~v~nHGi~~~~~~~~~~~~~~fF~lP~e~K~~~~~~~~~~~Gy~~~ 82 (312)
T 3oox_A 5 SAIDPVSFSLYAK-DF-TRFAQELGASFERYGFAVLSDYDLDQARIDAAVDSAKAFFALPVETKKQYAGVKGGARGYIPF 82 (312)
T ss_dssp CSSCCEETHHHHH-CH-HHHHHHHHHHHHHHSEEEEESCCSCHHHHHHHHHHHHHHHTSCHHHHGGGBSSGGGTSEEECC
T ss_pred CCCCeEEChHhcc-cH-HHHHHHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHhhhccCCCCccccccc
Confidence 5899999998854 22 336799999999999999999999999999999999999999999999998754567899654
Q ss_pred cccC--ccccCCcccccccccC-Cc-----cCCCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHh
Q 035879 126 FVVS--EEQKLDWGDLFFMTTL-PV-----HLRKPHLFPKLPLPLRDTLEVYSMELKSLAMNLILKMGKVLNIKDEEMKN 197 (356)
Q Consensus 126 ~~~~--~~~~~d~~e~~~~~~~-p~-----~~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~ 197 (356)
+... .....||+|.|+++.. +. ....+|.||+.+++||+++++|+++|.+|+.+||++|+++||+++++|.+
T Consensus 83 g~e~~~~~~~~D~kE~~~~~~~~~~~~~~~~~~~~n~wP~~~p~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~ 162 (312)
T 3oox_A 83 GVETAKGADHYDLKEFWHMGRDLPPGHRFRAHMADNVWPAEIPAFKHDVSWLYNSLDGMGGKVLEAIATYLKLERDFFKP 162 (312)
T ss_dssp CCCCSTTSCSCCCCEEEEECCCCCTTCGGGGTSCCCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTTTHH
T ss_pred cceecCCCCCCCceeeeEeecCCCcCCcchhccCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHH
Confidence 4322 2346799999887542 11 12357999999999999999999999999999999999999999999999
Q ss_pred hhcCCceeEEeeecCCCCCCCCcccccCcccCCceEEEEecCCCCccccc-cCCceEeccCCCCeEEEEhhhHHHHHhCC
Q 035879 198 FFENGLQVMRMNYYPPCPQPEKVVGLTPHSDGPALTILLQINEVEGLQIK-KDGVWIPVTPLPNAFIVNIGDIMEIITNG 276 (356)
Q Consensus 198 ~~~~~~~~lr~~~Ypp~~~~~~~~g~~~HtD~g~lTlL~q~~~~~GLqV~-~~g~W~~V~p~~g~~vVniGd~Le~~TnG 276 (356)
.+.++.+.||++|||||+.++..+|+++|||+|+||||+| ++++||||+ ++|+|++|+|+||++||||||+||+||||
T Consensus 163 ~~~~~~~~lr~~~Ypp~~~~~~~~g~~~HtD~g~lTlL~q-d~v~GLqV~~~~g~W~~V~p~pg~~vVNiGD~l~~~TnG 241 (312)
T 3oox_A 163 TVQDGNSVLRLLHYPPIPKDATGVRAGAHGDINTITLLLG-AEEGGLEVLDRDGQWLPINPPPGCLVINIGDMLERLTNN 241 (312)
T ss_dssp HHTTCCCEEEEEEECCCSSCCC--CEEEECCCSSEEEEEC-CTTSCEEEECTTSCEEECCCCSSCEEEEECHHHHHHTTT
T ss_pred HhcCCcceeeeEecCCCCCCcCCcCccceecCceEEEEeE-cCcCceEEECCCCcEEECCCCCCeEEEEhHHHHHHHhCC
Confidence 9988889999999999987655599999999999999999 679999997 48999999999999999999999999999
Q ss_pred eecccccccccCC----CCCccceeeeeecCCCeeEecCCcccCCCCCCCCc-ccCHHHHHHHHHhhh
Q 035879 277 KYRSIEHRVTVNS----VQERLSVGTFYYTRYDGEVYPASSLISEKAPALFR-RLTVEEYLSGRFARE 339 (356)
Q Consensus 277 ~~kst~HRVv~~~----~~~R~Si~~F~~P~~d~~i~pl~~~~~~~~p~~y~-~~~~~e~~~~~~~~~ 339 (356)
+||||.|||+.++ ..+|||++||++|+.|++|+|+++|+++++|++|+ ++|++||+..+++..
T Consensus 242 ~~kS~~HRVv~~~~~~~~~~R~Sia~F~~P~~d~~i~pl~~~v~~~~p~~y~~~~t~~eyl~~r~~~~ 309 (312)
T 3oox_A 242 VLPSTVHRVVNPPPERRGVPRYSTPFFLHFASDYEIKTLQNCVTAENPDRYPESITADEFLQQRLREI 309 (312)
T ss_dssp SSCCCCEEECCCCGGGTTSCEEECCEEECCCTTCEECCCGGGCCSSSCCSCSSCEEHHHHHHHHHHHH
T ss_pred eecCCCceEeCCCccCCCCCEEEEEEEecCCCCcEEecCccccCCCCcccCCCCeeHHHHHHHHHHHh
Confidence 9999999998764 45799999999999999999999999999999999 999999999998754
No 4
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ...
Probab=100.00 E-value=9e-72 Score=533.57 Aligned_cols=284 Identities=20% Similarity=0.323 Sum_probs=252.5
Q ss_pred CCCCCeeeCCCCCCCChh--HHHHHHHHHHHHhcceEEEEcCCCCHHHHHHHHHHHHHH-ccCCHHHHhhhcCCCCCccc
Q 035879 45 VSKLPVIDMQSLLSEESM--DSELAKLDSACKEWGFFQMVNHGVSSAFLEKVKKEVHEF-FNLSMEEKKKYWQSPEDLEG 121 (356)
Q Consensus 45 ~~~iPvIDls~l~~~d~~--~~~~~~l~~A~~~~Gff~l~nhGi~~~l~~~~~~~~~~f-F~lP~e~K~~~~~~~~~~~G 121 (356)
..+||||||+.|.+++.. .+.+++|.+||++||||||+|||| +++++++.+++| |+||.|+|+++.. +|
T Consensus 6 ~~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFf~v~nHGi---l~~~~~~~~~~F~F~lP~eeK~~~~~-----~G 77 (331)
T 1odm_A 6 KANVPKIDVSPLFGDDQAAKMRVAQQIDAASRDTGFFYAVNHGI---NVQRLSQKTKEFHMSITPEEKWDLAI-----RA 77 (331)
T ss_dssp BCCCCEEECGGGGSSCHHHHHHHHHHHHHHHHTTSEEEEESCCC---CHHHHHHHHHHHHHHCCHHHHHHHBC-----TT
T ss_pred CCCCCEEEchHhcCCChHHHHHHHHHHHHHHHhCCEEEEEccce---eHHHHHHHHHhccCCCCHHHHHhhhh-----cC
Confidence 357999999998766542 236799999999999999999999 999999999999 9999999999976 57
Q ss_pred cccCccc--Cc------cccCCcccccccccCCcc----------CCCCCCCCCC--CcchHHHHHHHHHHHHHHHHHHH
Q 035879 122 FGQAFVV--SE------EQKLDWGDLFFMTTLPVH----------LRKPHLFPKL--PLPLRDTLEVYSMELKSLAMNLI 181 (356)
Q Consensus 122 y~~~~~~--~~------~~~~d~~e~~~~~~~p~~----------~~~~~~wP~~--~~~fr~~~~~y~~~~~~l~~~ll 181 (356)
|...+.. .. .+..||+|.|+++..... ..++|.||+. +++||+.+++|+++|.+|+..||
T Consensus 78 y~~~~~e~~~~~~~~~~~~~~d~kE~~~~~~~~~~~~p~~~~~~~~~~~n~wP~~~~~p~fr~~~~~y~~~~~~l~~~ll 157 (331)
T 1odm_A 78 YNKEHQDQVRAGYYLSIPGKKAVESFCYLNPNFTPDHPRIQAKTPTHEVNVWPDETKHPGFQDFAEQYYWDVFGLSSALL 157 (331)
T ss_dssp TCTTCTTCSSSEEECCBTTTBCCEEEEECCTTCCTTSHHHHTTCTTCCCCCCCCTTTSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcCCccccccccccccCCCCChhheEecccCCccccccccccccccCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHH
Confidence 7643322 11 157799999998753210 2458999998 89999999999999999999999
Q ss_pred HHHHHhcCCChhhHHhhhcCCceeEE--eeecC------C---CCCCCC-cccccCcccCCceEEEEecCCCCccccc-c
Q 035879 182 LKMGKVLNIKDEEMKNFFENGLQVMR--MNYYP------P---CPQPEK-VVGLTPHSDGPALTILLQINEVEGLQIK-K 248 (356)
Q Consensus 182 ~~la~~Lgl~~~~f~~~~~~~~~~lr--~~~Yp------p---~~~~~~-~~g~~~HtD~g~lTlL~q~~~~~GLqV~-~ 248 (356)
++|+++||+++++|.+.+..+.+.|| ++||| | |++++. .+|+++|||+|+||||+| ++++||||+ +
T Consensus 158 ~~la~~Lgl~~~~f~~~~~~~~~~lr~~l~~YP~~~~~~p~~~~~~~~~~~~g~~~HtD~g~lTlL~q-d~v~GLQV~~~ 236 (331)
T 1odm_A 158 KGYALALGKEENFFARHFKPDDTLASVVLIRYPYLDPYPEAAIKTAADGTKLSFEWHEDVSLITVLYQ-SNVQNLQVETA 236 (331)
T ss_dssp HHHHHHTTSCTTTTGGGCCTTTCCCEEEEEEECCCSSCCGGGCEECTTSCEEEEEEECCSSSEEEEEE-CSSCCEEEEET
T ss_pred HHHHHHhCCCHHHHHHHhcCcHHHHHHHHhhCCCcccccccccCCCccccccccccccCCCeEEEEee-CCCCCEEEEcC
Confidence 99999999999999999988889999 99999 7 777776 899999999999999999 679999999 5
Q ss_pred CCceEeccCCCCeEEEEhhhHHHHHhCCeecccccccccCCCCCccceeeeeecCCCeeEecCCcccCCCCCCCCcccCH
Q 035879 249 DGVWIPVTPLPNAFIVNIGDIMEIITNGKYRSIEHRVTVNSVQERLSVGTFYYTRYDGEVYPASSLISEKAPALFRRLTV 328 (356)
Q Consensus 249 ~g~W~~V~p~~g~~vVniGd~Le~~TnG~~kst~HRVv~~~~~~R~Si~~F~~P~~d~~i~pl~~~~~~~~p~~y~~~~~ 328 (356)
+| |++|+|+||++||||||+||+||||+||||.|||+. ++.+|||++||++|+.|++|+|+++++++++ ++|+++++
T Consensus 237 ~g-Wi~V~p~pgalvVNiGD~l~~~TnG~~kS~~HRVv~-~~~~R~Sia~F~~P~~d~~i~pl~~~~~~~~-~~y~~~t~ 313 (331)
T 1odm_A 237 AG-YQDIEADDTGYLINCGSYMAHLTNNYYKAPIHRVKW-VNAERQSLPFFVNLGYDSVIDPFDPREPNGK-SDREPLSY 313 (331)
T ss_dssp TE-EEECCCCTTSEEEEECHHHHHHTTTSSCCCCEEEEC-CCSCEEEEEEEECCCTTCBCCCCCTTSTTCC-CSSCCCBH
T ss_pred CC-eEECCCCCCeEEEEccHHHHHHhCCEeeCCCceeCC-CCCCEEEEEEEEcCCCCCEEeCCCccccccc-cCCCCccH
Confidence 78 999999999999999999999999999999999986 4789999999999999999999999998877 99999999
Q ss_pred HHHHHHHHhhhc
Q 035879 329 EEYLSGRFAREL 340 (356)
Q Consensus 329 ~e~~~~~~~~~~ 340 (356)
+||+..++++.+
T Consensus 314 ~e~l~~~~~~~~ 325 (331)
T 1odm_A 314 GDYLQNGLVSLI 325 (331)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999988764
No 5
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A*
Probab=100.00 E-value=7.2e-73 Score=536.56 Aligned_cols=279 Identities=18% Similarity=0.269 Sum_probs=239.5
Q ss_pred CCCCeeeCCCCCCCChhHHHHHHHHHHHHhcceEEEEcCCCCHHHHHHHHHHHHHHccCC-HHHHhhhcCCC-CCccccc
Q 035879 46 SKLPVIDMQSLLSEESMDSELAKLDSACKEWGFFQMVNHGVSSAFLEKVKKEVHEFFNLS-MEEKKKYWQSP-EDLEGFG 123 (356)
Q Consensus 46 ~~iPvIDls~l~~~d~~~~~~~~l~~A~~~~Gff~l~nhGi~~~l~~~~~~~~~~fF~lP-~e~K~~~~~~~-~~~~Gy~ 123 (356)
.+||||||+.+.+++. . ++|.+||++||||||+||||+.++++++++.+++||+|| .|+|+++.... ...+||+
T Consensus 3 ~~iPvIDls~l~~~~~-~---~~l~~A~~~~GFf~l~nHGi~~~l~~~~~~~~~~fF~lP~~e~K~~~~~~~~~~~~Gy~ 78 (311)
T 1dcs_A 3 TTVPTFSLAELQQGLH-Q---DEFRRCLRDKGLFYLTDCGLTDTELKSAKDLVIDFFEHGSEAEKRAVTSPVPTMRRGFT 78 (311)
T ss_dssp CCCCEEEHHHHHTTCS-H---HHHHHHHHHTCEEEEESSSCCHHHHHHHHHHHHHHHHHCCHHHHHHTBCSSCCSSSEEE
T ss_pred CCCcEEEchhhcCCCH-H---HHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHcCCcHHHhHHhhccCCCCCCcee
Confidence 5799999998865543 2 399999999999999999999999999999999999999 99999998754 5689998
Q ss_pred cCccc------CccccCCcccccccccCCccCCCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhcCC----Chh
Q 035879 124 QAFVV------SEEQKLDWGDLFFMTTLPVHLRKPHLFPKLPLPLRDTLEVYSMELKSLAMNLILKMGKVLNI----KDE 193 (356)
Q Consensus 124 ~~~~~------~~~~~~d~~e~~~~~~~p~~~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl----~~~ 193 (356)
..+.. ...+..||+|.|+++.. +|.|| +++||+.+++|+++|.+|+.+|+++|+++||+ +++
T Consensus 79 ~~~~e~~~~~~~~~~~~d~~E~~~~~~~------~n~wP--~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~ 150 (311)
T 1dcs_A 79 GLESESTAQITNTGSYSDYSMCYSMGTA------DNLFP--SGDFERIWTQYFDRQYTASRAVAREVLRATGTEPDGGVE 150 (311)
T ss_dssp EC-----------------CEEEEECSS------SCCCS--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCTTCHH
T ss_pred eccccccccccCCCCCCCcceeeeccCC------CCCCC--ChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcCcHh
Confidence 75433 22467899999998753 68999 89999999999999999999999999999999 888
Q ss_pred hHHhhhcCCceeEEeeecCCCCCCC--C--cccccCcccCCceEEEEecCCCCc---cccccCCceEeccCCCCeEEEEh
Q 035879 194 EMKNFFENGLQVMRMNYYPPCPQPE--K--VVGLTPHSDGPALTILLQINEVEG---LQIKKDGVWIPVTPLPNAFIVNI 266 (356)
Q Consensus 194 ~f~~~~~~~~~~lr~~~Ypp~~~~~--~--~~g~~~HtD~g~lTlL~q~~~~~G---LqV~~~g~W~~V~p~~g~~vVni 266 (356)
+|.+. .+.||++|||||++++ + .+|+++|||+|+||||+|+++++| |||+++|+|++|+|+||++||||
T Consensus 151 ~f~~~----~~~lrl~~YPp~~~~~~~~~~~~g~~~HtD~g~lTlL~qd~~v~G~~~LqV~~~g~W~~V~p~pg~lvVNi 226 (311)
T 1dcs_A 151 AFLDC----EPLLRFRYFPQVPEHRSAEEQPLRMAPHYDLSMVTLIQQTPCANGFVSLQAEVGGAFTDLPYRPDAVLVFC 226 (311)
T ss_dssp HHHSC----CCEEEEEEECC-----------CCEEEEEECSSEEEEEEECCTTCCCCEEEEETTEEEECCCCTTCEEEEE
T ss_pred HHhhc----chhhheecCCCCCcccccCccccccccccCCCeEEEEecCCCCCCceeEEEEeCCEEEeCcCCCCeEEEEH
Confidence 88765 6889999999998763 3 678999999999999999437999 99999999999999999999999
Q ss_pred hhHHHHHhCCeecccccccccCC-----CCCccceeeeeecCCCeeEecCCcccCCCCCCCC--cccCHHHHHHHHHhhh
Q 035879 267 GDIMEIITNGKYRSIEHRVTVNS-----VQERLSVGTFYYTRYDGEVYPASSLISEKAPALF--RRLTVEEYLSGRFARE 339 (356)
Q Consensus 267 Gd~Le~~TnG~~kst~HRVv~~~-----~~~R~Si~~F~~P~~d~~i~pl~~~~~~~~p~~y--~~~~~~e~~~~~~~~~ 339 (356)
||+||+||||+||||.|||++++ ..+|||++||++|+.|++|. +++++++++|++| +++|++||+..++++.
T Consensus 227 GD~l~~~TnG~~kS~~HRVv~~~~~~~~~~~R~Si~~F~~p~~d~~i~-l~~~~~~~~p~~y~~~~~t~~ey~~~~~~~~ 305 (311)
T 1dcs_A 227 GAIATLVTGGQVKAPRHHVAAPRRDQIAGSSRTSSVFFLRPNADFTFS-VPLARECGFDVSLDGETATFQDWIGGNYVNI 305 (311)
T ss_dssp CHHHHHHTTSCSCCCCEEECCC----CTTCCEEEEEEEECCCTTCEEE-HHHHHHTTCCCCCCSSEEEHHHHHCSSCCCE
T ss_pred HHHHHHHhCCcccCCCceEeCCCcccCCCCCeEEEEEEEcCCCCcEEe-CCcccCCCCccccCCCCccHHHHHHHHHHHH
Confidence 99999999999999999999887 67899999999999999999 9999988899999 9999999999888776
Q ss_pred cC
Q 035879 340 LR 341 (356)
Q Consensus 340 ~~ 341 (356)
+.
T Consensus 306 ~~ 307 (311)
T 1dcs_A 306 RR 307 (311)
T ss_dssp EC
T ss_pred hc
Confidence 64
No 6
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis}
Probab=100.00 E-value=1.8e-67 Score=492.37 Aligned_cols=260 Identities=25% Similarity=0.382 Sum_probs=224.4
Q ss_pred CCCCeeeCCCCCCCChhHHHHHHHHHHHHhcceEEEEcCCCCHHHHHHHHHHHHHHccCCHHHHhhhcCCCCCccccccC
Q 035879 46 SKLPVIDMQSLLSEESMDSELAKLDSACKEWGFFQMVNHGVSSAFLEKVKKEVHEFFNLSMEEKKKYWQSPEDLEGFGQA 125 (356)
Q Consensus 46 ~~iPvIDls~l~~~d~~~~~~~~l~~A~~~~Gff~l~nhGi~~~l~~~~~~~~~~fF~lP~e~K~~~~~~~~~~~Gy~~~ 125 (356)
++||||||+.. + ++++|.+||++||||||+||||+.++++++++.+++||++ |+|+++...+...+||...
T Consensus 2 ~~IPvIDls~~------~-~~~~l~~A~~~~GFF~v~nHGi~~~li~~~~~~~~~FF~l--e~K~k~~~~~~~~~GY~~~ 72 (280)
T 3on7_A 2 MKLETIDYRAA------D-SAKRFVESLRETGFGVLSNHPIDKELVERIYTEWQAFFNS--EAKNEFMFNRETHDGFFPA 72 (280)
T ss_dssp --CCEEETTST------T-HHHHHHHHHHHHSEEEEESCSSCHHHHHHHHHHHHHHHTS--GGGGGGBCCTTTCCEEECC
T ss_pred CCCCEEECCCh------h-HHHHHHHHHHhCCEEEEECCCCCHHHHHHHHHHHHHHhhh--HHHHHhccCCCCCCccccC
Confidence 58999999964 1 5689999999999999999999999999999999999998 7999998766678999764
Q ss_pred c-cc--CccccCCcccccccccCCccCCCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhcCCCh--hh---HHh
Q 035879 126 F-VV--SEEQKLDWGDLFFMTTLPVHLRKPHLFPKLPLPLRDTLEVYSMELKSLAMNLILKMGKVLNIKD--EE---MKN 197 (356)
Q Consensus 126 ~-~~--~~~~~~d~~e~~~~~~~p~~~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~--~~---f~~ 197 (356)
. .. ......||+|.|.+. .||..+++||+.+++|+++|.+|+.+||++||++||++. ++ |.+
T Consensus 73 ~~~e~~~~~~~~D~kE~~~~~----------p~~~~p~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~~~~~ 142 (280)
T 3on7_A 73 SISETAKGHTVKDIKEYYHVY----------PWGRIPDSLRANILAYYEKANTLASELLEWIETYSPDEIKAKFSIPLPE 142 (280)
T ss_dssp C--------CCCCSCEEEEEC----------TTSCCCGGGHHHHHHHHHHHHHHHHHHHHHHHHTSCHHHHTTCSSCHHH
T ss_pred ccccccCCCCcccHHHHHhcC----------CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcchhhhhHHHHH
Confidence 3 11 123467999988652 378788999999999999999999999999999999863 22 566
Q ss_pred hhcCCc-eeEEeeecCCCCCCC--CcccccCcccCCceEEEEecCCCCcccccc-CCceEeccCCCCeEEEEhhhHHHHH
Q 035879 198 FFENGL-QVMRMNYYPPCPQPE--KVVGLTPHSDGPALTILLQINEVEGLQIKK-DGVWIPVTPLPNAFIVNIGDIMEII 273 (356)
Q Consensus 198 ~~~~~~-~~lr~~~Ypp~~~~~--~~~g~~~HtD~g~lTlL~q~~~~~GLqV~~-~g~W~~V~p~~g~~vVniGd~Le~~ 273 (356)
.+.++. +.||++|||||+.++ ..+|+++|||+|+||||+| ++++||||+. +|+|++|+|.||++||||||+||+|
T Consensus 143 ~~~~~~~~~lr~~~YP~~~~~~~~~~~g~~~HtD~g~lTlL~q-d~~~GLqV~~~~g~W~~V~p~pg~~vVNiGD~l~~~ 221 (280)
T 3on7_A 143 MIANSHKTLLRILHYPPMTGDEEMGAIRAAAHEDINLITVLPT-ANEPGLQVKAKDGSWLDVPSDFGNIIINIGDMLQEA 221 (280)
T ss_dssp HHTTCSSCEEEEEEECCCCTTCCCCSEEEEEECCCSSEEEEEC-CSCCCEEEECTTSCEEECCCCTTCEEEEECHHHHHH
T ss_pred HhcCCccceEEEEECCCCCCccccCcccccCCCCCCeEEEEEe-cCCCCeEEEcCCCCEEECcCCCCEEEEEcChHHHHH
Confidence 666554 899999999998754 4789999999999999999 6899999995 8999999999999999999999999
Q ss_pred hCCeecccccccccCC----CCCccceeeeeecCCCeeEecCCcccCCCCCCCCcccCHHHHHHHHHhhh
Q 035879 274 TNGKYRSIEHRVTVNS----VQERLSVGTFYYTRYDGEVYPASSLISEKAPALFRRLTVEEYLSGRFARE 339 (356)
Q Consensus 274 TnG~~kst~HRVv~~~----~~~R~Si~~F~~P~~d~~i~pl~~~~~~~~p~~y~~~~~~e~~~~~~~~~ 339 (356)
|||+||||.|||++++ ..+|||++||++|+.|++|+| ++|++||+..|++..
T Consensus 222 Tng~~kS~~HRVv~~~~~~~~~~R~Si~~F~~P~~d~~i~p--------------~ita~~~l~~rl~~~ 277 (280)
T 3on7_A 222 SDGYFPSTSHRVINPEGTDKTKSRISLPLFLHPHPSVVLSE--------------RYTADSYLMERLREL 277 (280)
T ss_dssp TTTSSCCCCEEEECCTTCCTTSCEEECCEEECCCTTCBCSS--------------SCBHHHHHHHHHHHT
T ss_pred hCCcccCCCceEeCCCCCCCCCCeEEEEEEEcCCCCCEECC--------------CccHHHHHHHHHHHh
Confidence 9999999999998864 458999999999999999974 599999999998764
No 7
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155}
Probab=94.81 E-value=0.063 Score=48.08 Aligned_cols=104 Identities=16% Similarity=0.052 Sum_probs=62.7
Q ss_pred HHHHHHHhcCCChhhHHhhhcCCceeEEeeecCCCCCCCCcccccCcccCC-----------ceEEEEecCC----C-Cc
Q 035879 180 LILKMGKVLNIKDEEMKNFFENGLQVMRMNYYPPCPQPEKVVGLTPHSDGP-----------ALTILLQINE----V-EG 243 (356)
Q Consensus 180 ll~~la~~Lgl~~~~f~~~~~~~~~~lr~~~Ypp~~~~~~~~g~~~HtD~g-----------~lTlL~q~~~----~-~G 243 (356)
|.+.|...|+....++...+.....-+++++|.+-. -..+|.|.. .+|+++.-++ . |.
T Consensus 75 l~~~i~~~l~~~~~f~~~~L~~~~e~~~~~rY~~G~------~y~~H~D~~~~~~~~~~~~r~~T~~lYLndp~~~~GGe 148 (243)
T 3dkq_A 75 LGQQIMDRLLAHPQFVSAALPLQFYPPLFNRYQGGE------TFGYHIDNAIRSTPDGMIRTDLSATLFLSEPENYQGGE 148 (243)
T ss_dssp HHHHHHHHHHTCHHHHHHHCEEEEEEEEEEEECTTC------EEEEECBCSEEEETTEEEECCEEEEEECSCGGGEEECC
T ss_pred HHHHHHHHHccCcchhhcccccccccceEEEECCCC------eeccCCCCCCCCCCCccccceEEEEEEeCCCCCCCCce
Confidence 334444444444333322223234458899998732 246677753 4666666333 2 33
Q ss_pred cccccCCceEeccCCCCeEEEEhhhHHHHHhCCeecccccccccCCCCCccceeeeee
Q 035879 244 LQIKKDGVWIPVTPLPNAFIVNIGDIMEIITNGKYRSIEHRVTVNSVQERLSVGTFYY 301 (356)
Q Consensus 244 LqV~~~g~W~~V~p~~g~~vVniGd~Le~~TnG~~kst~HRVv~~~~~~R~Si~~F~~ 301 (356)
|.+.....=..|+|..|.+|+.-. .++|+|..-....||+++.+++
T Consensus 149 tvf~~~~~~~~V~P~~G~~v~F~s------------~~lH~v~pV~~G~R~~~~~Wi~ 194 (243)
T 3dkq_A 149 LVIQDTYGQQSIKLSAGSLVLYPS------------SSLHQVTPVLSGERTAAFMWLQ 194 (243)
T ss_dssp EEEEETTEEEEECCCTTCEEEEET------------TSEEEECCEEEECEEEEEEEEE
T ss_pred EEEeeCCCcEEEecCCCEEEEECC------------CCeEcCccccccCEEEEEEehh
Confidence 555543334679999999999742 3689996444468999999986
No 8
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=93.77 E-value=0.46 Score=41.58 Aligned_cols=43 Identities=21% Similarity=0.221 Sum_probs=33.8
Q ss_pred CceEeccCCCCeEEEEhhhHHHHHhCCeecccccccccCC-CCCccceeeeeecCC
Q 035879 250 GVWIPVTPLPNAFIVNIGDIMEIITNGKYRSIEHRVTVNS-VQERLSVGTFYYTRY 304 (356)
Q Consensus 250 g~W~~V~p~~g~~vVniGd~Le~~TnG~~kst~HRVv~~~-~~~R~Si~~F~~P~~ 304 (356)
..+..|.|.+|.+||.-..+ .|.|.... +++|+||+|.+.+..
T Consensus 166 ~~~~~i~P~~G~lvlFpS~l------------~H~V~p~~~~~~RiSIsFN~~~~~ 209 (216)
T 2rg4_A 166 RTFRSVAPKVGDVLLWESWL------------RHEVPMNMAEEDRISVSFNYAWGE 209 (216)
T ss_dssp CSEEEECCCTTEEEEEETTS------------CEEECCCCSSSCEEEEEEEEEC--
T ss_pred CCeeEecCCCCeEEEECCCC------------EEeccCCCCCCCEEEEEEEeecCC
Confidence 45678999999999987753 89998654 468999999998765
No 9
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A*
Probab=88.70 E-value=0.68 Score=41.33 Aligned_cols=183 Identities=15% Similarity=0.198 Sum_probs=97.5
Q ss_pred HHHHHHHHHhcceEEEEcCCCCHHHHHHHHHHHHHHccCCHHHHhhhcCCCCCccccccCcccCccccCCcccccccccC
Q 035879 66 LAKLDSACKEWGFFQMVNHGVSSAFLEKVKKEVHEFFNLSMEEKKKYWQSPEDLEGFGQAFVVSEEQKLDWGDLFFMTTL 145 (356)
Q Consensus 66 ~~~l~~A~~~~Gff~l~nhGi~~~l~~~~~~~~~~fF~lP~e~K~~~~~~~~~~~Gy~~~~~~~~~~~~d~~e~~~~~~~ 145 (356)
...|.+++.+.|++++.|- ++++.++.+.+.++.+-+ .-.+. +. ..|-... ....+.+..
T Consensus 16 ~~~i~~~L~~~g~~Vid~f-Ls~ee~~~L~~~~~~~~~-----~g~~~--~a-~i~~~~~-----~~~~~iR~d------ 75 (247)
T 2hbt_A 16 LEYIVPCMNKHGICVVDDF-LGKETGQQIGDEVRALHD-----TGKFT--DG-QLVSQKS-----DSSKDIRGD------ 75 (247)
T ss_dssp HHTHHHHHHHTSEEEESSS-SCHHHHHHHHHHHHHHHH-----TTCSC--SC-CEEECCS-----SSTTCEECC------
T ss_pred HHHHHHHhccCCEEEECCC-CCHHHHHHHHHHHHhhhh-----cCCcc--cc-ccccccc-----ccccccccc------
Confidence 4678899999999886655 899999999988877421 00011 10 0110000 000000000
Q ss_pred CccCCCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHhhhcCCceeEEeeecCCCCCCCCcccccC
Q 035879 146 PVHLRKPHLFPKLPLPLRDTLEVYSMELKSLAMNLILKMGKVLNIKDEEMKNFFENGLQVMRMNYYPPCPQPEKVVGLTP 225 (356)
Q Consensus 146 p~~~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~lr~~~Ypp~~~~~~~~g~~~ 225 (356)
...|-+......+.+..|.+.|.++.. .+...||+.. .. ...-+.+.+|++. .-....
T Consensus 76 ------~i~wl~~~~~~~~~~~~l~~~i~~l~~----~ln~~lGl~~------i~-~~~e~~~~~Y~~~-----G~~y~~ 133 (247)
T 2hbt_A 76 ------KITWIEGKEPGCETIGLLMSSMDDLIR----HCNGKLGSYK------IN-GRTKAMVACYPGN-----GTGYVR 133 (247)
T ss_dssp ------EEEEECSCSTTCHHHHHHHHHHHHHHH----HTTTTSTTCC------EE-EECCEEEEEECSS-----SCCEEE
T ss_pred ------ceeeecccccchhHHHHHHHHHHHHHH----HHhhhcCccc------cc-ccceEEEEEecCC-----CCcccc
Confidence 001111000011223345555544433 2222233320 00 1133667889861 123566
Q ss_pred cccCC-----ceEEEEecCC-------CCccccccCC--ceEeccCCCCeEEEEhhhHHHHHhCCeecccccccccCCCC
Q 035879 226 HSDGP-----ALTILLQINE-------VEGLQIKKDG--VWIPVTPLPNAFIVNIGDIMEIITNGKYRSIEHRVTVNSVQ 291 (356)
Q Consensus 226 HtD~g-----~lTlL~q~~~-------~~GLqV~~~g--~W~~V~p~~g~~vVniGd~Le~~TnG~~kst~HRVv~~~~~ 291 (356)
|.|.. .+|+++.-++ .|.|.+...+ ....|.|..|.+|+.-.+. -++|.|.. ...
T Consensus 134 H~D~~~~~~R~~T~vlYLN~~w~~~~~GG~l~~~~~~~~~~~~v~P~~grlv~F~s~~----------~~~H~V~p-~~~ 202 (247)
T 2hbt_A 134 HVDNPNGDGRCVTCIYYLNKDWDAKVSGGILRIFPEGKAQFADIEPKFDRLLFFWSDR----------RNPHEVQP-AYA 202 (247)
T ss_dssp ECSSCSCCSEEEEEEEECBTTCCHHHHBCCEEECCTTCSSCEEECCBTTEEEEEECST----------TCCEEECC-BSS
T ss_pred cccCCCCCCceEEEEEEeCCCCCCCCCceeEEEecCCCCceEEEEcCCCEEEEEecCC----------Cceeeecc-CCC
Confidence 77762 5788776333 2336777643 6789999999999986431 16899864 457
Q ss_pred Cccceeeeee
Q 035879 292 ERLSVGTFYY 301 (356)
Q Consensus 292 ~R~Si~~F~~ 301 (356)
.||||+..++
T Consensus 203 ~R~sit~W~~ 212 (247)
T 2hbt_A 203 TRYAITVWYF 212 (247)
T ss_dssp CEEEEEEEEE
T ss_pred EEEEEEEEEc
Confidence 9999988765
No 10
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str}
Probab=81.94 E-value=3.5 Score=35.93 Aligned_cols=104 Identities=12% Similarity=0.049 Sum_probs=60.6
Q ss_pred HHHHHHHHhcCCChhhHHhhhcCCceeEEeeecCCCCCCCCcccccCcccCC-----------ceEEEEecCC--CCc-c
Q 035879 179 NLILKMGKVLNIKDEEMKNFFENGLQVMRMNYYPPCPQPEKVVGLTPHSDGP-----------ALTILLQINE--VEG-L 244 (356)
Q Consensus 179 ~ll~~la~~Lgl~~~~f~~~~~~~~~~lr~~~Ypp~~~~~~~~g~~~HtD~g-----------~lTlL~q~~~--~~G-L 244 (356)
.|.+.|+..+|++.+ ..-.+++++|.+.. ...+|.|+. .+|+++.-++ .|| +
T Consensus 94 ~i~~Ri~~~~gl~~~--------~~E~lqv~~Y~~G~------~y~~H~D~~~~~~~~~~~~R~~T~l~YLnd~~~GGeT 159 (216)
T 3itq_A 94 KIEKRISSIMNVPAS--------HGEGLHILNYEVDQ------QYKAHYDYFAEHSRSAANNRISTLVMYLNDVEEGGET 159 (216)
T ss_dssp HHHHHHHHHHTSCGG--------GBCCCEEEEECBTC------CEEEECSSCCTTSGGGGGCEEEEEEEECSCCSEECCE
T ss_pred HHHHHHHHhcCceec--------cccceeEEEeCCCC------ccccccCCCcCCCcccCCceEEEEEEecccCCcCcee
Confidence 344445555677632 12347888887632 145677753 3788777433 233 3
Q ss_pred ccccCCceEeccCCCCeEEEEhhhHHHHHhCCe-ecccccccccCCCCCccceeeeeec
Q 035879 245 QIKKDGVWIPVTPLPNAFIVNIGDIMEIITNGK-YRSIEHRVTVNSVQERLSVGTFYYT 302 (356)
Q Consensus 245 qV~~~g~W~~V~p~~g~~vVniGd~Le~~TnG~-~kst~HRVv~~~~~~R~Si~~F~~P 302 (356)
..... =+.|.|..|.+|+.-.- ..+|. -..++|+|..-....||++..+++-
T Consensus 160 ~Fp~~--~~~V~P~~G~al~f~~~----~~~g~~d~~~lH~~~PV~~G~K~v~~~W~~~ 212 (216)
T 3itq_A 160 FFPKL--NLSVHPRKGMAVYFEYF----YQDQSLNELTLHGGAPVTKGEKWIATQWVRR 212 (216)
T ss_dssp EETTT--TEEECCCTTCEEEEECC----CSSHHHHHTTCEEECCEEESCEEEEEEEEES
T ss_pred EecCC--CCEEecCCCeEEEEecc----CCCCCCCCccccccceeccccEEEEEeeEec
Confidence 33222 27889999998886430 01121 1468999864344589999888763
No 11
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A
Probab=78.66 E-value=2.1 Score=37.21 Aligned_cols=89 Identities=13% Similarity=0.175 Sum_probs=54.1
Q ss_pred eEEeeecCCCCCCCCcccccCcccC--------------CceEEEEecCC--CCc-cccccCC-------------ceEe
Q 035879 205 VMRMNYYPPCPQPEKVVGLTPHSDG--------------PALTILLQINE--VEG-LQIKKDG-------------VWIP 254 (356)
Q Consensus 205 ~lr~~~Ypp~~~~~~~~g~~~HtD~--------------g~lTlL~q~~~--~~G-LqV~~~g-------------~W~~ 254 (356)
-+++++|.+-. ...+|.|+ ..+|+|+.-++ .|| +.+...+ .-+.
T Consensus 99 ~~qv~rY~~G~------~y~~H~D~~~~~~~~~~~~~~~R~~T~l~YLnd~~~GGeT~Fp~~~~~~~~~~~~~c~~~~~~ 172 (224)
T 2jig_A 99 GLQVLHYHDGQ------KYEPHYDYFHDPVNAGPEHGGQRVVTMLMYLTTVEEGGETVLPNAEQKVTGDGWSECAKRGLA 172 (224)
T ss_dssp CCEEEEEETTC------CEEEECCSSCCTTSSSCCCCSCEEEEEEEECSCCSEECCEEETTSSSCCCSTTSCTTGGGSEE
T ss_pred ceEEEecCCCc------cccCcccCCCCccccccccCCCeEEEEEEEecCCCCCCceeCCCcccccccccccccccCceE
Confidence 47788887622 24556664 24788766333 233 4332211 2478
Q ss_pred ccCCCCeEEEEhhhHHHHHhCCee-cccccccccCCCCCccceeeeeecC
Q 035879 255 VTPLPNAFIVNIGDIMEIITNGKY-RSIEHRVTVNSVQERLSVGTFYYTR 303 (356)
Q Consensus 255 V~p~~g~~vVniGd~Le~~TnG~~-kst~HRVv~~~~~~R~Si~~F~~P~ 303 (356)
|.|..|.+|+.-- ...+|.. ..++|+|..-....||++..+++-.
T Consensus 173 V~P~~G~al~f~~----~~~~g~~d~~~lH~~~PV~~G~K~~~~~Wi~~~ 218 (224)
T 2jig_A 173 VKPIKGDALMFYS----LKPDGSNDPASLHGSCPTLKGDKWSATKWIHVA 218 (224)
T ss_dssp ECCCTTCEEEEES----BCTTSCBCGGGCEEECCEEESEEEEEEEEEESS
T ss_pred EecccCcEEEEEe----eCCCCCCCCCCcccCCccccceEEEEEEeEEcC
Confidence 9999999888642 0123332 5789998644346899999988643
No 12
>2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10
Probab=77.99 E-value=3.6 Score=36.35 Aligned_cols=84 Identities=11% Similarity=0.077 Sum_probs=53.0
Q ss_pred eeEEeeecCCCCCCCCcccccCcccCC--------ceEEEEecCCCCcccccc-C----------CceEeccCCCCeEEE
Q 035879 204 QVMRMNYYPPCPQPEKVVGLTPHSDGP--------ALTILLQINEVEGLQIKK-D----------GVWIPVTPLPNAFIV 264 (356)
Q Consensus 204 ~~lr~~~Ypp~~~~~~~~g~~~HtD~g--------~lTlL~q~~~~~GLqV~~-~----------g~W~~V~p~~g~~vV 264 (356)
...-+|+|.+- .-++++|.|-. ..||-+. ...=+.+.. . +..+.+...+|.++|
T Consensus 126 n~~LvN~Y~~G-----~d~i~~H~D~~~~~~~~~~IaslSLG--~~~~f~f~~~~~~~~~~~~~~~~~~~i~L~~gsllv 198 (238)
T 2iuw_A 126 NSLLCNLYRNE-----KDSVDWHSDDEPSLGRCPIIASLSFG--ATRTFEMRKKPPPEENGDYTYVERVKIPLDHGTLLI 198 (238)
T ss_dssp CEEEEEEECST-----TCCEEEECCCCGGGCSSCCEEEEEEE--SCEEEEEEECCC--------CCCEEEEEECTTCEEE
T ss_pred CEEEEEEECCC-----CCceeCCcCChhhcCCCCcEEEEECC--CCEEEEEeccCCccccCcccCCceEEEEcCCCCEEE
Confidence 45678999873 23688898852 2222222 111122222 1 468899999999999
Q ss_pred EhhhHHHHHhCCeecccccccccCCCCCccceeeee
Q 035879 265 NIGDIMEIITNGKYRSIEHRVTVNSVQERLSVGTFY 300 (356)
Q Consensus 265 niGd~Le~~TnG~~kst~HRVv~~~~~~R~Si~~F~ 300 (356)
+-|++=..|..|.-+.. .....|+|+.|=.
T Consensus 199 M~G~~r~~w~H~I~~~~------~~~~~RIsLTfR~ 228 (238)
T 2iuw_A 199 MEGATQADWQHRVPKEY------HSREPRVNLTFRT 228 (238)
T ss_dssp EEETHHHHEEEEECCCS------SCCCCEEEEEEEC
T ss_pred EChhhhCccEecCCCcC------CCCCCEEEEEeee
Confidence 99998777765543321 1246899999965
No 13
>3s57_A Alpha-ketoglutarate-dependent dioxygenase ALKB HO; protein-DNA complex, jelly-roll fold, dioxygenase, dsDNA BIN plasma, oxidoreductase-DNA complex; HET: AKG; 1.60A {Homo sapiens} PDB: 3s5a_A* 3rzg_A 3rzl_A 3rzh_A* 3rzj_A* 3rzk_A* 3rzm_A 3bty_A* 3buc_A* 3h8r_A* 3h8o_A* 3h8x_A* 3btx_A* 3bu0_A* 3btz_A*
Probab=76.63 E-value=3.2 Score=35.72 Aligned_cols=81 Identities=9% Similarity=0.116 Sum_probs=50.5
Q ss_pred eeEEeeecCCCCCCCCcccccCcccCC-------ce-EEEEecCCCCcccccc----------CCceEeccCCCCeEEEE
Q 035879 204 QVMRMNYYPPCPQPEKVVGLTPHSDGP-------AL-TILLQINEVEGLQIKK----------DGVWIPVTPLPNAFIVN 265 (356)
Q Consensus 204 ~~lr~~~Ypp~~~~~~~~g~~~HtD~g-------~l-TlL~q~~~~~GLqV~~----------~g~W~~V~p~~g~~vVn 265 (356)
...-+|+|.+-. -+++.|.|-. .| ++-+. ...-+.+.. .+..+.+...+|.++|.
T Consensus 100 n~~LvN~Y~~G~-----d~i~~H~D~~~~~~~~~~IasvSLG--~~~~f~~~~~~~~~~~~~~~~~~~~~~L~~GsllvM 172 (204)
T 3s57_A 100 NFVLINRYKDGS-----DHICEHRDDERELAPGSPIASVSFG--ASRDFVFRHKDSRGKSPSRRVAVVRLPLAHGSLLMM 172 (204)
T ss_dssp SEEEEEEESSTT-----CCEEEECCCCTTBCTTCCEEEEEEE--SCEEEEEEEGGGCSSSCSCCCCCEEEEECTTEEEEE
T ss_pred ceeEEEEECCCC-----CcccceecChhhccCCCcEEEEECC--CceEEEEEEcCCCccccccCCceEEEECCCCCEEEE
Confidence 345689998722 2688898862 12 22222 112233321 12578899999999999
Q ss_pred hhhHHHHHhCCeecccccccccC--CCCCccceeee
Q 035879 266 IGDIMEIITNGKYRSIEHRVTVN--SVQERLSVGTF 299 (356)
Q Consensus 266 iGd~Le~~TnG~~kst~HRVv~~--~~~~R~Si~~F 299 (356)
-|++=..|. |.|-.. ....|+|+.|-
T Consensus 173 ~g~~q~~w~--------H~Ip~~~~~~~~RislTFR 200 (204)
T 3s57_A 173 NHPTNTHWY--------HSLPVRKKVLAPRVNLTFR 200 (204)
T ss_dssp ETTHHHHEE--------EEECCCTTCCSCEEEEEEE
T ss_pred CchhhheeE--------eeccccCCCCCCEEEEEee
Confidence 999877785 554322 23579999984
No 14
>3i3q_A Alpha-ketoglutarate-dependent dioxygenase ALKB; beta jellyroll, DNA damage, DNA repair, iron, M binding, oxidoreductase; HET: AKG; 1.40A {Escherichia coli} SCOP: b.82.2.10 PDB: 2fd8_A* 2fdg_A* 2fdh_A* 2fdf_A* 2fdj_A 2fdk_A* 2fdi_A* 3i2o_A* 3i3m_A* 3i49_A* 3t4h_B* 3t3y_A* 3t4v_A* 3o1t_A* 3o1o_A* 3o1m_A* 3o1r_A* 3o1s_A* 3o1p_A* 3o1u_A* ...
Probab=68.19 E-value=5.7 Score=34.39 Aligned_cols=80 Identities=15% Similarity=0.124 Sum_probs=50.4
Q ss_pred eeEEeeecCCCCCCCCcccccCcccC-----C--ceEEEEecCCCCcccccc---CCceEeccCCCCeEEEEhhhHHHHH
Q 035879 204 QVMRMNYYPPCPQPEKVVGLTPHSDG-----P--ALTILLQINEVEGLQIKK---DGVWIPVTPLPNAFIVNIGDIMEII 273 (356)
Q Consensus 204 ~~lr~~~Ypp~~~~~~~~g~~~HtD~-----g--~lTlL~q~~~~~GLqV~~---~g~W~~V~p~~g~~vVniGd~Le~~ 273 (356)
...-+|+|.+ +. ++++|.|- + .+|+-+. ...-+.+.. .+..+.+...+|.++|.-|++- .|
T Consensus 105 n~~LvN~Y~~-----G~-~i~~H~D~~e~~~~~pI~svSLG--~~~~f~f~~~~~~~~~~~i~L~~GsllvM~G~~r-~~ 175 (211)
T 3i3q_A 105 DACLINRYAP-----GA-KLSLHQDKDEPDLRAPIVSVSLG--LPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESR-LF 175 (211)
T ss_dssp CEEEEEEECT-----TC-CEEEECCCCCSCTTSCEEEEEEE--SCEEEEECCSSTTSCCEEEEECTTCEEEECGGGT-TC
T ss_pred CEEEEEEEcC-----CC-CcccccCCCccccCCCEEEEECC--CCeEEEEecccCCCceEEEECCCCCEEEECchHH-ce
Confidence 4467899977 23 78999993 2 2233332 112233332 3678899999999999999872 22
Q ss_pred hCCeecccccccccCC-------CCCccceeeee
Q 035879 274 TNGKYRSIEHRVTVNS-------VQERLSVGTFY 300 (356)
Q Consensus 274 TnG~~kst~HRVv~~~-------~~~R~Si~~F~ 300 (356)
.|.|.... ...|+|+.|-.
T Consensus 176 --------~H~I~~~~~~~~p~~~~~RIsLTFR~ 201 (211)
T 3i3q_A 176 --------YHGIQPLKAGFHPLTIDCRYNLTFRQ 201 (211)
T ss_dssp --------CEEECCCCCCCBTTTBTCEEEEEEEC
T ss_pred --------EeccCcccCCcCCCCCCCEEEEEeee
Confidence 46664322 13599999864
No 15
>3tht_A Alkylated DNA repair protein ALKB homolog 8; structural genomics, PSI-biology, northeast structural genom consortium, NESG; HET: AKG; 3.01A {Homo sapiens} PDB: 3thp_A*
Probab=64.79 E-value=5.1 Score=37.49 Aligned_cols=94 Identities=21% Similarity=0.230 Sum_probs=60.5
Q ss_pred ceeEEeeecCCCCCCCCcccccCcccCC-----ce-EEEEecCCCCcccccc-CCceEeccCCCCeEEEEhhhHHHHHhC
Q 035879 203 LQVMRMNYYPPCPQPEKVVGLTPHSDGP-----AL-TILLQINEVEGLQIKK-DGVWIPVTPLPNAFIVNIGDIMEIITN 275 (356)
Q Consensus 203 ~~~lr~~~Ypp~~~~~~~~g~~~HtD~g-----~l-TlL~q~~~~~GLqV~~-~g~W~~V~p~~g~~vVniGd~Le~~Tn 275 (356)
....-+|+|.+- -++++|.|-. .| |+-+- ...-+.+.. +|.++.+...+|.++|.-|++=..|..
T Consensus 197 ~n~~lvN~Y~~G------~~I~~H~D~~~~~~~~I~slSLG--~~~~f~f~~~~~~~~~l~L~~gsLlvM~G~~r~~w~H 268 (345)
T 3tht_A 197 PDQMTINQYEPG------QGIPAHIDTHSAFEDEIVSLSLG--SEIVMDFKHPDGIAVPVMLPRRSLLVMTGESRYLWTH 268 (345)
T ss_dssp CSEEEEEEECTT------CCEEEECCCTTTBCSCEEEEEES--SCEEEEEECTTSCEEEEEECTTEEEEECTHHHHTSEE
T ss_pred CCEEEEEEecCC------CCEeeccCCchhcCCeEEEEECC--CceeEEEccCCCceEEEEcCCCcEEEEChHHhhceEc
Confidence 345678999772 2789999984 22 22221 112233333 567999999999999999999988977
Q ss_pred Ceeccccccccc------------------CCCCCccceeeeeecCC
Q 035879 276 GKYRSIEHRVTV------------------NSVQERLSVGTFYYTRY 304 (356)
Q Consensus 276 G~~kst~HRVv~------------------~~~~~R~Si~~F~~P~~ 304 (356)
|.-+-...-+-. .....|+|+.|=.-+..
T Consensus 269 ~I~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~r~~RiSlT~R~v~~~ 315 (345)
T 3tht_A 269 GITCRKFDTVQASESLKSGIITSDVGDLTLSKRGLRTSFTFRKVRQT 315 (345)
T ss_dssp EECCCSEEEEESGGGSSCEECCSSSSCEEEEECCCEEEEEEECBCSS
T ss_pred cCCcccCCccCcccccccccccccCCCceeccCCCEEEEEEEecCCC
Confidence 765544333210 01246999999876554
No 16
>2dbn_A Hypothetical protein YBIU; alpha/beta structure, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Escherichia coli} PDB: 2dbi_A 2csg_A*
Probab=59.38 E-value=6.8 Score=37.90 Aligned_cols=54 Identities=11% Similarity=0.156 Sum_probs=41.6
Q ss_pred CCCCCeeeCCCCCCCChhHHHHHHHHHHHHhcceEEEEcCCCCHHHHHHHHHHHHHHcc
Q 035879 45 VSKLPVIDMQSLLSEESMDSELAKLDSACKEWGFFQMVNHGVSSAFLEKVKKEVHEFFN 103 (356)
Q Consensus 45 ~~~iPvIDls~l~~~d~~~~~~~~l~~A~~~~Gff~l~nhGi~~~l~~~~~~~~~~fF~ 103 (356)
+..||.|||+.+.++.- -++..+.+++.|++.|.|. ||.+......+...+|.+
T Consensus 98 ~~~iP~i~f~di~~~~~----s~~~~~~ir~rG~vVIRgv-vp~e~A~~~~~~~~~yl~ 151 (461)
T 2dbn_A 98 DAVWPVLSYADIKAGHV----TAEQREQIKRRGCAVIKGH-FPREQALGWDQSMLDYLD 151 (461)
T ss_dssp CCSSCEEEHHHHHHTCC----CHHHHHHHHHHSEEEEETS-SCHHHHHHHHHHHHHHHH
T ss_pred CCCcceecHHHhcCCCC----CHHHHHHHHhccEEEECCC-CCHHHHHHHHHHHHHHHH
Confidence 46899999998754321 1455678899999999887 899888888888888764
No 17
>3o2g_A Gamma-butyrobetaine dioxygenase; gamma-butyrobetaine hydroxylase, 2-OXOG dioxygenase 1, oxidoreductase, structural genomics; HET: OGA NM2; 1.78A {Homo sapiens} PDB: 3ms5_A* 3n6w_A
Probab=53.11 E-value=5.8 Score=37.62 Aligned_cols=52 Identities=21% Similarity=0.252 Sum_probs=39.3
Q ss_pred CCCeeeCCCCCCCChhHHHHHHHHHHHHhcceEEEEcCCCCHHHHHHHHHHHHHHccC
Q 035879 47 KLPVIDMQSLLSEESMDSELAKLDSACKEWGFFQMVNHGVSSAFLEKVKKEVHEFFNL 104 (356)
Q Consensus 47 ~iPvIDls~l~~~d~~~~~~~~l~~A~~~~Gff~l~nhGi~~~l~~~~~~~~~~fF~l 104 (356)
++|.||++.+.+.| +.+.++.+|+.++|++.+.|-.++.+ ...+.++.|=.+
T Consensus 122 ~~~~~~~~~~l~~d---~~~~~~~~~l~~~Gvv~frg~~~~~~---~~~~~a~~~G~l 173 (388)
T 3o2g_A 122 QLPTLDFEDVLRYD---EHAYKWLSTLKKVGIVRLTGASDKPG---EVSKLGKRMGFL 173 (388)
T ss_dssp CCCEEEHHHHHHCH---HHHHHHHHHHHHHSEEEEECCCSSTT---HHHHHHHHHSCC
T ss_pred CCCccCHHHHhcCH---HHHHHHHHHHHhcCEEEEeCCCCCHH---HHHHHHHHhCCC
Confidence 68999998875432 36799999999999999999988754 344556666544
No 18
>1otj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, alpha ketoglutarate-dependent dioxygenase, oxidoreductase; 1.90A {Escherichia coli} SCOP: b.82.2.5 PDB: 1gqw_A* 1os7_A* 1gy9_A
Probab=39.87 E-value=26 Score=31.16 Aligned_cols=51 Identities=14% Similarity=0.174 Sum_probs=37.0
Q ss_pred CCCCCeeeCCCCCCCChhHHHHHHHHHHHHhcceEEEEcCCCCHHHHHHHHHHHHHHc
Q 035879 45 VSKLPVIDMQSLLSEESMDSELAKLDSACKEWGFFQMVNHGVSSAFLEKVKKEVHEFF 102 (356)
Q Consensus 45 ~~~iPvIDls~l~~~d~~~~~~~~l~~A~~~~Gff~l~nhGi~~~l~~~~~~~~~~fF 102 (356)
.++|+-||++...+ ++.+++|.+++.++|++.+.+-.++.+. ..+.++.|=
T Consensus 15 Gaei~gvdl~~~l~----~~~~~~l~~~l~~~Gvv~frg~~~~~~~---~~~~~~~~G 65 (283)
T 1otj_A 15 GAQISGADLTRPLS----DNQFEQLYHAVLRHQVVFLRDQAITPQQ---QRALAQRFG 65 (283)
T ss_dssp CEEEESCCSSSCCC----HHHHHHHHHHHHHHSEEEECSCCCCHHH---HHHHHHTTS
T ss_pred eEEEECCCcCccCC----HHHHHHHHHHHHHCCEEEECCCCCCHHH---HHHHHHHhC
Confidence 35788889988542 2267899999999999999998887543 334455543
No 19
>4ay7_A Methylcobalamin\: coenzyme M methyltransferase; TIM barrel; 1.80A {Methanosarcina mazei} PDB: 4ay8_A
Probab=37.73 E-value=65 Score=29.51 Aligned_cols=39 Identities=13% Similarity=0.032 Sum_probs=31.4
Q ss_pred HHHHHHHHHHhcceEEEEcCCCC----HHHHHHHHHHHHHHcc
Q 035879 65 ELAKLDSACKEWGFFQMVNHGVS----SAFLEKVKKEVHEFFN 103 (356)
Q Consensus 65 ~~~~l~~A~~~~Gff~l~nhGi~----~~l~~~~~~~~~~fF~ 103 (356)
..+++.+.++.-||+.=.+|||+ .+-++.+.+++++|++
T Consensus 306 i~~~v~~~l~~~g~I~~~Ghgi~p~tp~env~a~v~av~ey~A 348 (348)
T 4ay7_A 306 IKAEAKEALEGGIDVLAPGCGIAPMTPLENVKALVAARDEFYA 348 (348)
T ss_dssp HHHHHHHHHHTTCSEEEESSSCCTTCCHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHhCCCCEEeCCCccCCCCCHHHHHHHHHHHHHhcC
Confidence 34677777888888777789974 5889999999999985
No 20
>2da7_A Zinc finger homeobox protein 1B; homeobox domain, three helices with the DNA binding helix- turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=35.44 E-value=17 Score=25.68 Aligned_cols=41 Identities=20% Similarity=0.242 Sum_probs=34.1
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHhhhc
Q 035879 160 LPLRDTLEVYSMELKSLAMNLILKMGKVLNIKDEEMKNFFE 200 (356)
Q Consensus 160 ~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~ 200 (356)
.+-+..+++||..-.+-...-+..||..+||+.+.+.-.|.
T Consensus 14 k~ql~~Lk~yF~~n~~Ps~eei~~LA~~lgL~~~VVrVWFq 54 (71)
T 2da7_A 14 KDHMSVLKAYYAMNMEPNSDELLKISIAVGLPQEFVKEWFE 54 (71)
T ss_dssp THHHHHHHHHHHHCSSCCHHHHHHHHHHHTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCHHHHHHHHh
Confidence 45578899999998888888899999999999887665554
No 21
>1oih_A Putative alkylsulfatase ATSK; non-heme Fe(II) alphaketoglutarate dependent dioxygenase, jelly roll, oxidoreductase; 1.89A {Pseudomonas putida} SCOP: b.82.2.5 PDB: 1oii_A* 1oij_B* 1vz4_A 1vz5_A 1oik_A* 1oij_A* 1oij_C*
Probab=31.48 E-value=41 Score=30.18 Aligned_cols=52 Identities=4% Similarity=0.023 Sum_probs=37.9
Q ss_pred CCCCCeeeCCCCCCCChhHHHHHHHHHHHHhcceEEEEcCC-CCHHHHHHHHHHHHHHcc
Q 035879 45 VSKLPVIDMQSLLSEESMDSELAKLDSACKEWGFFQMVNHG-VSSAFLEKVKKEVHEFFN 103 (356)
Q Consensus 45 ~~~iPvIDls~l~~~d~~~~~~~~l~~A~~~~Gff~l~nhG-i~~~l~~~~~~~~~~fF~ 103 (356)
.++|+-||++...+ ++.+++|.+++.++|++.+.+-. ++. ++..+.++.|=.
T Consensus 25 Gaei~gvdl~~~l~----~~~~~~l~~~l~~~Gvv~fRg~~~l~~---~~~~~~~~~fG~ 77 (301)
T 1oih_A 25 GAEIRGVKLSPDLD----AATVEAIQAALVRHKVIFFRGQTHLDD---QSQEGFAKLLGE 77 (301)
T ss_dssp CEEEESCCCCTTCC----HHHHHHHHHHHHHHSEEEECCCTTCCH---HHHHHHHHTTSC
T ss_pred ceEEeCCCccccCC----HHHHHHHHHHHHHCCEEEECCCCCCCH---HHHHHHHHHhCC
Confidence 35677889987442 22578999999999999999987 874 444555666544
No 22
>2opi_A L-fuculose-1-phosphate aldolase; L-fuculose-1-phosphate aldolas structural genomics, PSI-2, protein structure initiative; 2.50A {Bacteroides thetaiotaomicron}
Probab=30.08 E-value=27 Score=29.77 Aligned_cols=36 Identities=19% Similarity=0.160 Sum_probs=27.5
Q ss_pred CCCeeeCCCCCCCChhHHHHHHHHHHHHhcceEEEEcCCC
Q 035879 47 KLPVIDMQSLLSEESMDSELAKLDSACKEWGFFQMVNHGV 86 (356)
Q Consensus 47 ~iPvIDls~l~~~d~~~~~~~~l~~A~~~~Gff~l~nhGi 86 (356)
.||++++.... + .+..+.+.+++.+.-.+.|.|||+
T Consensus 125 ~v~~~~y~~~g--~--~~la~~i~~~l~~~~avll~nHG~ 160 (212)
T 2opi_A 125 EIPVIPYYRPG--S--PELAKAVVEAMLKHNSVLLTNHGQ 160 (212)
T ss_dssp CCCEECCCCTT--C--HHHHHHHHHHTSSCSEEEETTTEE
T ss_pred CeEEEcCCCCC--c--HHHHHHHHHHhccCCEEEEcCCCc
Confidence 79999987542 2 225578888998888899999995
No 23
>3kt7_A PKHD-type hydroxylase TPA1; double-stranded beta helix fold, dioxygenase, iron, mRNP complex, prolyl hydroxylase; HET: AKG; 1.77A {Saccharomyces cerevisiae} PDB: 3kt1_A 3kt4_A 3mgu_A
Probab=25.93 E-value=1.7e+02 Score=29.43 Aligned_cols=103 Identities=18% Similarity=0.149 Sum_probs=59.2
Q ss_pred HHHHHHHHHhcCCChhhHHhhhcCCceeEEeeecCCCCCCCCcccccCcccC-C--ceEEEEecCC---------CCccc
Q 035879 178 MNLILKMGKVLNIKDEEMKNFFENGLQVMRMNYYPPCPQPEKVVGLTPHSDG-P--ALTILLQINE---------VEGLQ 245 (356)
Q Consensus 178 ~~ll~~la~~Lgl~~~~f~~~~~~~~~~lr~~~Ypp~~~~~~~~g~~~HtD~-g--~lTlL~q~~~---------~~GLq 245 (356)
..++..|+...|++. +.+...-+-+.+|++.. ....|.|. + .+|+++.-+. .|-|+
T Consensus 104 ~~Fr~~Ls~iTGi~~------Lsg~~~D~~~a~Y~~G~------fL~~H~D~~~~RrvS~VLYLN~pd~~W~~e~GGeL~ 171 (633)
T 3kt7_A 104 KQYRDFFGYVTKAGK------LSGSKTDMSINTYTKGC------HLLTHDDVIGSRRISFILYLPDPDRKWKSHYGGGLR 171 (633)
T ss_dssp HHHHHHHHHHHTCCC------CCSSCCCEEEEEECTTC------EEEEECCCCTTEEEEEEEECSCTTSCCCGGGBCCEE
T ss_pred HHHHHHHHHHhCCcc------cCCCceeEEEEEeCCCC------eeeecCCCCCCeEEEEEEEcCCCCCCCCccCCceEE
Confidence 345566666667631 11111225667787622 36778884 2 3565554222 34488
Q ss_pred cccC--------CceEeccCCCCeEEEEhhhHHHHHhCCeeccccccccc-CCCCCccceeeeee
Q 035879 246 IKKD--------GVWIPVTPLPNAFIVNIGDIMEIITNGKYRSIEHRVTV-NSVQERLSVGTFYY 301 (356)
Q Consensus 246 V~~~--------g~W~~V~p~~g~~vVniGd~Le~~TnG~~kst~HRVv~-~~~~~R~Si~~F~~ 301 (356)
++.. .....|.|..|.+|+..-. -+ .+.|.|.. .++..|+||+-.++
T Consensus 172 Lyd~d~~~~P~~d~~~~I~P~fNrLV~F~vs------p~---~S~H~V~eV~~~~~RlSItGWF~ 227 (633)
T 3kt7_A 172 LFPSILPNVPHSDPSAKLVPQFNQIAFFKVL------PG---FSFHDXEEVKVDKHRLSIQGWYH 227 (633)
T ss_dssp ECCEEETTEECSSCSEEECCCTTEEEEEECC------TT---TCCEEECCBCSSCCEEEEEEEEE
T ss_pred EecCCCcCCCCCCceEEEecCCCeEEEEEcC------CC---CCcCCCCccCCCCCEEEEEEEec
Confidence 7752 2467899999999987521 01 24676521 12678999976654
No 24
>3ghf_A Septum site-determining protein MINC; structural genomics, cell division, cell cycle, septation, PSI-2, protein structure initiative; HET: CIT; 2.20A {Salmonella typhimurium LT2}
Probab=25.34 E-value=66 Score=24.88 Aligned_cols=36 Identities=22% Similarity=0.241 Sum_probs=26.9
Q ss_pred eeeCCCCCCCChhHHHHHHHHHHHHhcceEEEEcCCCCHH
Q 035879 50 VIDMQSLLSEESMDSELAKLDSACKEWGFFQMVNHGVSSA 89 (356)
Q Consensus 50 vIDls~l~~~d~~~~~~~~l~~A~~~~Gff~l~nhGi~~~ 89 (356)
|||++.+.+ +. .+..|.+.|+++|+..|--.|.+.+
T Consensus 51 VlDl~~l~~-~~---dl~~L~~~l~~~gl~~vGV~g~~~~ 86 (120)
T 3ghf_A 51 VINVSGLES-PV---NWPELHKIVTSTGLRIIGVSGCKDA 86 (120)
T ss_dssp EEEEEECCS-SC---CHHHHHHHHHTTTCEEEEEESCCCH
T ss_pred EEEccccCC-hH---HHHHHHHHHHHcCCEEEEEeCCCcH
Confidence 579988852 22 4688999999999999877776544
No 25
>1e5r_A Proline oxidase; oxidoreductase, oxygenase, 2-oxoglutarate dependent oxygenase; 2.30A {Streptomyces SP} SCOP: b.82.2.4 PDB: 1e5s_A
Probab=25.34 E-value=54 Score=29.67 Aligned_cols=65 Identities=14% Similarity=0.147 Sum_probs=40.1
Q ss_pred cccCcccC--------CceEEEEecCCCCccccccCCceEeccCCCCeEEEEhhhHHHHHhCCeecccccccccCCCCCc
Q 035879 222 GLTPHSDG--------PALTILLQINEVEGLQIKKDGVWIPVTPLPNAFIVNIGDIMEIITNGKYRSIEHRVTVNSVQER 293 (356)
Q Consensus 222 g~~~HtD~--------g~lTlL~q~~~~~GLqV~~~g~W~~V~p~~g~~vVniGd~Le~~TnG~~kst~HRVv~~~~~~R 293 (356)
.+.+|.|. +.+-+...-...+|.....+|+-+..++ ..+.++|. +..|.|.+.++.+|
T Consensus 103 ~I~~HrD~~~l~~~~~~~~RlHIPL~Tnp~~~f~vdg~~~~m~~-GE~w~~d~-------------~~~H~v~N~g~~~R 168 (290)
T 1e5r_A 103 IVIPHRDFVELDREVDRYFRTFMVLEDSPLAFHSNEDTVIHMRP-GEIWFLDA-------------ATVHSAVNFSEISR 168 (290)
T ss_dssp EEEEECCC--------CBCCEEEECSCCTTEEEEETTEEECCCT-TEEEECCT-------------TSCEEEEESSSSCC
T ss_pred EeeCccCccccccccCCceEEEeeEecCCCcEEEECCEEEecCC-CCEEEEcC-------------CCeeEEEcCCCCCe
Confidence 47889998 3344444322346665555665554444 22333332 35899999999999
Q ss_pred cceeeee
Q 035879 294 LSVGTFY 300 (356)
Q Consensus 294 ~Si~~F~ 300 (356)
+.+.+=+
T Consensus 169 IhLv~D~ 175 (290)
T 1e5r_A 169 QSLCVDF 175 (290)
T ss_dssp CEEEEEE
T ss_pred EEEEEEe
Confidence 9988655
No 26
>2x4k_A 4-oxalocrotonate tautomerase; isomerase; 1.10A {Staphylococcus aureus}
Probab=25.17 E-value=59 Score=20.95 Aligned_cols=24 Identities=17% Similarity=0.178 Sum_probs=19.6
Q ss_pred HHHHHHHHHHHHHHHHhcCCChhh
Q 035879 171 MELKSLAMNLILKMGKVLNIKDEE 194 (356)
Q Consensus 171 ~~~~~l~~~ll~~la~~Lgl~~~~ 194 (356)
++-.+|+..|.+++++.||.|++.
T Consensus 17 e~k~~l~~~l~~~l~~~lg~p~~~ 40 (63)
T 2x4k_A 17 EQLKNLVSEVTDAVEKTTGANRQA 40 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCGGG
T ss_pred HHHHHHHHHHHHHHHHHhCcCccc
Confidence 345678899999999999999753
No 27
>3rcq_A Aspartyl/asparaginyl beta-hydroxylase; structural genomics, structural genomics consortium, SGC, oxidoreductase, human; HET: OGA; 2.05A {Homo sapiens}
Probab=24.68 E-value=35 Score=29.09 Aligned_cols=67 Identities=19% Similarity=0.223 Sum_probs=40.4
Q ss_pred cccCcccCC--ceEEEEecCCCCccccccCCceEeccCCCCeEEEEhhhHHHHHhCCee----cccccccccCCCCCccc
Q 035879 222 GLTPHSDGP--ALTILLQINEVEGLQIKKDGVWIPVTPLPNAFIVNIGDIMEIITNGKY----RSIEHRVTVNSVQERLS 295 (356)
Q Consensus 222 g~~~HtD~g--~lTlL~q~~~~~GLqV~~~g~W~~V~p~~g~~vVniGd~Le~~TnG~~----kst~HRVv~~~~~~R~S 295 (356)
.+.+|+|.. .+++++. |+ ||+ ++ ..+.||+.--.|..|.. -|-.|.|.+.+++.|+-
T Consensus 114 ~I~pH~g~~n~~lR~HL~------L~---------~p~-~~-~~i~V~~~~~~w~eGe~~~fDds~~Hev~N~~d~~Rvv 176 (197)
T 3rcq_A 114 HVWPHTGPTNCRLRMHLG------LV---------IPK-EG-CKIRCANETKTWEEGKVLIFDDSFEHEVWQDASSFRLI 176 (197)
T ss_dssp EEEEECCSCTTEEEEEEE------EE---------CCS-SS-EEEEETTEEECCCBTCEEEECTTSCEEEEECSSSCEEE
T ss_pred CcCCeeCCCCCeEEEEEE------EE---------eCC-CC-cEEEECCEEEEeeCCcEEEEcCCeEEEEEECCCCCEEE
Confidence 477888875 4455543 22 222 12 23345555555666654 36789999988888977
Q ss_pred eee-eeecCCC
Q 035879 296 VGT-FYYTRYD 305 (356)
Q Consensus 296 i~~-F~~P~~d 305 (356)
+.+ |.+|+.+
T Consensus 177 L~~D~~rPdl~ 187 (197)
T 3rcq_A 177 FIVDVWHPELT 187 (197)
T ss_dssp EEEEEECTTSC
T ss_pred EEEeeeCCCCC
Confidence 665 5667654
No 28
>3pvj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, Fe(II) binding, oxidoreductas; 1.85A {Pseudomonas putida KT2440} SCOP: b.82.2.5 PDB: 3v15_A 3v17_A*
Probab=23.69 E-value=59 Score=28.89 Aligned_cols=51 Identities=10% Similarity=0.145 Sum_probs=37.4
Q ss_pred CCCCCeeeCCCCCCCChhHHHHHHHHHHHHhcceEEEEcCCCCHHHHHHHHHHHHHHc
Q 035879 45 VSKLPVIDMQSLLSEESMDSELAKLDSACKEWGFFQMVNHGVSSAFLEKVKKEVHEFF 102 (356)
Q Consensus 45 ~~~iPvIDls~l~~~d~~~~~~~~l~~A~~~~Gff~l~nhGi~~~l~~~~~~~~~~fF 102 (356)
.++|.=||++...+ ++.+++|.+|+.++|.+.+.|-.++.+ +..+.++.|=
T Consensus 13 Gaei~gvdl~~~l~----~~~~~~l~~~l~~~gvv~fR~q~l~~~---~~~~fa~~fG 63 (277)
T 3pvj_A 13 GAQISGVDISRDIS----AEERDAIEQALLQHQVLFLRDQPINPE---QQARFAARFG 63 (277)
T ss_dssp CEEEESCCTTSCCC----HHHHHHHHHHHHHHSEEEESSCCCCHH---HHHHHHGGGS
T ss_pred eEEEeCCCccccCC----HHHHHHHHHHHHHCCEEEECCCCCCHH---HHHHHHHHhC
Confidence 45788899987433 236789999999999999999888754 3344556653
No 29
>2fk5_A Fuculose-1-phosphate aldolase; class II aldolase, metal binding, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 1.90A {Thermus thermophilus} PDB: 2flf_A
Probab=23.20 E-value=46 Score=28.11 Aligned_cols=36 Identities=17% Similarity=0.254 Sum_probs=26.9
Q ss_pred CCCee-eCCCCCCCChhHHHHHHHHHHHHhcceEEEEcCCC
Q 035879 47 KLPVI-DMQSLLSEESMDSELAKLDSACKEWGFFQMVNHGV 86 (356)
Q Consensus 47 ~iPvI-Dls~l~~~d~~~~~~~~l~~A~~~~Gff~l~nhGi 86 (356)
.||++ ++.... + ++..+.+.+++.+.-.+.|.|||+
T Consensus 117 ~ip~~~~y~~~g--~--~ela~~i~~~l~~~~avll~nHG~ 153 (200)
T 2fk5_A 117 EVPVLAPKTVSA--T--EEAALSVAEALREHRACLLRGHGA 153 (200)
T ss_dssp CEEEECCSCCSS--S--HHHHHHHHHHHHHCSEEEETTTEE
T ss_pred CceEecCCCCCC--c--HHHHHHHHHHhCcCCEEEECCCCc
Confidence 78999 775442 2 225578888898888899999994
No 30
>2do1_A Nuclear protein HCC-1; SAP domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.140.2.1
Probab=22.94 E-value=66 Score=21.35 Aligned_cols=32 Identities=19% Similarity=0.521 Sum_probs=24.2
Q ss_pred HHHHHHHHHHhcceEEEEcCCCCHHHHHHHHHHHH
Q 035879 65 ELAKLDSACKEWGFFQMVNHGVSSAFLEKVKKEVH 99 (356)
Q Consensus 65 ~~~~l~~A~~~~Gff~l~nhGi~~~l~~~~~~~~~ 99 (356)
.+++|.+.|+..| |.-.|.-.++++++.+...
T Consensus 14 kV~eLK~~L~~rG---L~~~G~KaeLieRL~~~l~ 45 (55)
T 2do1_A 14 KLAELKQECLARG---LETKGIKQDLIHRLQAYLE 45 (55)
T ss_dssp CHHHHHHHHHHHT---CCCCSCHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHcC---CCCCCcHHHHHHHHHHHHh
Confidence 4688999999999 4556777788888776543
No 31
>1e4c_P L-fuculose 1-phosphate aldolase; aldolase (class II), bacterial L-fucose metabolism; 1.66A {Escherichia coli} SCOP: c.74.1.1 PDB: 1fua_A 2fua_A 3fua_A 4fua_A* 1dzv_P 1e4b_P 1e47_P* 1e48_P* 1dzz_P 1e46_P 1dzu_P 1dzy_P 1dzx_P 1dzw_P 1e49_P 1e4a_P
Probab=22.60 E-value=41 Score=28.67 Aligned_cols=36 Identities=14% Similarity=0.162 Sum_probs=27.0
Q ss_pred CCCeeeCCCCCCCChhHHHHHHHHHHHHhcceEEEEcCCC
Q 035879 47 KLPVIDMQSLLSEESMDSELAKLDSACKEWGFFQMVNHGV 86 (356)
Q Consensus 47 ~iPvIDls~l~~~d~~~~~~~~l~~A~~~~Gff~l~nhGi 86 (356)
.||++++....+ .+..+.+.+++.+.-.+.|.|||+
T Consensus 122 ~ip~~~y~~~g~----~~la~~i~~~l~~~~avll~nHG~ 157 (215)
T 1e4c_P 122 SIPCAPYATFGT----RELSEHVALALKNRKATLLQHHGL 157 (215)
T ss_dssp CBCEECCCCTTC----HHHHHHHHHHTSSCSEEEETTTEE
T ss_pred CcceeeCCCCCc----HHHHHHHHHHhccCCEEEEcCCCc
Confidence 689998865421 224578888998888899999995
No 32
>1pvt_A Sugar-phosphate aldolase; structural genomics, PSI, protein initiative, midwest center for structural genomics, MCSG; 2.50A {Thermotoga maritima} SCOP: c.74.1.1
Probab=21.07 E-value=55 Score=28.35 Aligned_cols=37 Identities=14% Similarity=0.023 Sum_probs=27.8
Q ss_pred CCCCeeeCCCCCCCChhHHHHHHHHHHHHhcceEEEEcCCC
Q 035879 46 SKLPVIDMQSLLSEESMDSELAKLDSACKEWGFFQMVNHGV 86 (356)
Q Consensus 46 ~~iPvIDls~l~~~d~~~~~~~~l~~A~~~~Gff~l~nhGi 86 (356)
..||++++.... + .+..+.+.+++++.-.+.+.|||+
T Consensus 160 ~~v~~~~y~~~g--~--~ela~~i~~~l~~~~avll~nHG~ 196 (238)
T 1pvt_A 160 QGISVVEFEKPG--S--VELGLKTVEKSEGKDAVLWDKHGV 196 (238)
T ss_dssp SCCEEECCCSTT--C--HHHHHHHHHHTSSCSEEEETTSCE
T ss_pred CCceEecCCCCC--c--HHHHHHHHHHhccCCEEEEcCCCc
Confidence 479999986442 2 225578888998888899999996
No 33
>3abf_A 4-oxalocrotonate tautomerase; isomerase; 1.94A {Thermus thermophilus}
Probab=20.67 E-value=86 Score=20.41 Aligned_cols=23 Identities=22% Similarity=0.199 Sum_probs=18.8
Q ss_pred HHHHHHHHHHHHHHHhcCCChhh
Q 035879 172 ELKSLAMNLILKMGKVLNIKDEE 194 (356)
Q Consensus 172 ~~~~l~~~ll~~la~~Lgl~~~~ 194 (356)
+-.+++..|.+++++.||.++++
T Consensus 16 qk~~l~~~lt~~l~~~lg~~~~~ 38 (64)
T 3abf_A 16 KKRELVRRLTEMASRLLGEPYEE 38 (64)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGG
T ss_pred HHHHHHHHHHHHHHHHhCCCccc
Confidence 34678888999999999998754
Done!