BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 035880
(530 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2Q9F|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1 In Complex
With Cholesterol-3-Sulphate
pdb|2Q9G|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1
pdb|3MDM|A Chain A, Thioperamide Complex Of Cytochrome P450 46a1
pdb|3MDR|A Chain A, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDR|B Chain B, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDT|A Chain A, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDT|B Chain B, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDV|A Chain A, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|3MDV|B Chain B, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|4ENH|A Chain A, Crystal Structure Of Human Cytochrome P450 Cyp46a1 With
Fluvoxamine Bound
pdb|4FIA|A Chain A, Crystal Structure Of Human Cyp46a1 P450 With Bicalutamide
Bound
Length = 456
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 110/471 (23%), Positives = 198/471 (42%), Gaps = 69/471 (14%)
Query: 46 VGAAIEQLMNYDRMHDWLVNYLSELKTVVVPMPFTTYTYIADPANVEHVLKTNFANYPKG 105
VG + Q D DW Y ++ V T + P +V+ L + Y K
Sbjct: 7 VGGRVLQ----DVFLDWAKKYGPVVRVNVF---HKTSVIVTSPESVKKFLMST--KYNKD 57
Query: 106 ETYHSYMEVLLGDGIFN------VDGELWRKQRKTASFEFASKNLRDFSTKVFREYSLKL 159
+ ++ + G+ +F + E W KQR+ F+ +L + F E + +L
Sbjct: 58 SKMYRALQTVFGERLFGQGLVSECNYERWHKQRRVIDLAFSRSSLVSL-METFNEKAEQL 116
Query: 160 SSILTQASCHNQEIDMQELLMRMTLDSICKVGFGVE----IGTLAPNLPDNRFAQAFDTA 215
IL + + MQ++L +D + K FG+E +G P + TA
Sbjct: 117 VEILEAKADGQTPVSMQDMLTYTAMDILAKAAFGMETSMLLGAQKPLSQAVKLMLEGITA 176
Query: 216 NIIVTLRFIDPLWKIKRFLHLGSEALLDKSIKVIDDFTYSVIKRRKAEIQEARETSDGTK 275
+ +F+ K R + +SI+ + ++RR+ ++ G +
Sbjct: 177 SRNTLAKFLPGKRKQLREVR--------ESIRFLRQVGRDWVQRRREALKR------GEE 222
Query: 276 IKYDILTRFIELSEDPESNLTDKSLRDVVLNFVIAGRDTTATTLTWGVYMAMTHNHVAEK 335
+ DILT+ ++ E + D+ L D + F IAG +T+A L + V + +
Sbjct: 223 VPADILTQILKAEEGAQD---DEGLLDNFVTFFIAGHETSANHLAFTVMELSRQPEIVAR 279
Query: 336 LYSELKAFEADRAKEEKASLVQYDKEDLESFNQRVTQFAGLLNYDSMGKLYYLHAVITET 395
L +E+ +E +Y L+++ +G+L YL V+ E+
Sbjct: 280 LQAEV---------DEVIGSKRY------------------LDFEDLGRLQYLSQVLKES 312
Query: 396 LRLYPAVPQDPKGILEDDVLPDGTKVKAGGMVTYVPYSMGRMEYNWGPDAASFKPERWLK 455
LRLYP + +LE++ L DG +V + + Y MGRM+ + D +F P+R+
Sbjct: 313 LRLYPPAWGTFR-LLEEETLIDGVRVPGNTPLLFSTYVMGRMD-TYFEDPLTFNPDRF-- 368
Query: 456 DGVFQNASPFKFTAFQAGPRICLGKDSAYLQMKMALAILCRFFKFKLVPDH 506
G F + F G R C+G+ A +++K+ +A L + +F+LVP
Sbjct: 369 -GPGAPKPRFTYFPFSLGHRSCIGQQFAQMEVKVVMAKLLQRLEFRLVPGQ 418
>pdb|1W0E|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0F|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0G|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|2J0D|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2J0D|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2V0M|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|C Chain C, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|D Chain D, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|3NXU|A Chain A, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
pdb|3NXU|B Chain B, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
Length = 485
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 103/418 (24%), Positives = 188/418 (44%), Gaps = 55/418 (13%)
Query: 124 DGELWRKQRKTASFEFASKNLRDFSTKVFREYSLKLSSILTQASCHNQEIDMQELLMRMT 183
+ E W++ R S F S L++ + +Y L L + + + + ++++ +
Sbjct: 100 EDEEWKRLRSLLSPTFTSGKLKEM-VPIIAQYGDVLVRNLRREAETGKPVTLKDVFGAYS 158
Query: 184 LDSICKVGFGVEIGTLAPNLPDNRFAQAFDTANIIVTLRFIDPLWKIKRFLHLGSEALLD 243
+D I FGV I +L N P + F + ++ F+DP FL + L
Sbjct: 159 MDVITSTSFGVNIDSL--NNPQDPFVE---NTKKLLRFDFLDPF-----FLSITVFPFLI 208
Query: 244 KSIKVIDDFTY-----SVIKRRKAEIQEARETSDGTKIKYDILTRFIELSEDPESNLTDK 298
++V++ + + +++ ++E+R D K + D L I+ S++ + + K
Sbjct: 209 PILEVLNICVFPREVTNFLRKSVKRMKESR-LEDTQKHRVDFLQLMID-SQNSKETESHK 266
Query: 299 SLRDVVLN-----FVIAGRDTTATTLTWGVYMAMTHNHVAEKLYSELKAFEADRAKEEKA 353
+L D+ L F+ AG +TT++ L++ +Y TH V +KL E+ A ++A
Sbjct: 267 ALSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPP--- 323
Query: 354 SLVQYDKEDLESFNQRVTQFAGLLNYDSMGKLYYLHAVITETLRLYPAVPQDPKGILEDD 413
YD++ ++ YL V+ ETLRL+P + + + + D
Sbjct: 324 ------------------------TYDTVLQMEYLDMVVNETLRLFP-IAMRLERVCKKD 358
Query: 414 VLPDGTKVKAGGMVTYVPYSMGRMEYNWGPDAASFKPERWLKDGVFQNASPFKFTAFQAG 473
V +G + G +V Y++ R W + F PER+ K N P+ +T F +G
Sbjct: 359 VEINGMFIPKGVVVMIPSYALHRDPKYWT-EPEKFLPERFSKKNK-DNIDPYIYTPFGSG 416
Query: 474 PRICLGKDSAYLQMKMALAILCRFFKFKLVPDH--PVKYRMMTILSMEHGLKLTVERR 529
PR C+G A + MK+AL + + F FK + P+K + +L E + L VE R
Sbjct: 417 PRNCIGMRFALMNMKLALIRVLQNFSFKPCKETQIPLKLSLGGLLQPEKPVVLKVESR 474
>pdb|1TQN|A Chain A, Crystal Structure Of Human Microsomal P450 3a4
Length = 486
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 103/418 (24%), Positives = 188/418 (44%), Gaps = 55/418 (13%)
Query: 124 DGELWRKQRKTASFEFASKNLRDFSTKVFREYSLKLSSILTQASCHNQEIDMQELLMRMT 183
+ E W++ R S F S L++ + +Y L L + + + + ++++ +
Sbjct: 101 EDEEWKRLRSLLSPTFTSGKLKEM-VPIIAQYGDVLVRNLRREAETGKPVTLKDVFGAYS 159
Query: 184 LDSICKVGFGVEIGTLAPNLPDNRFAQAFDTANIIVTLRFIDPLWKIKRFLHLGSEALLD 243
+D I FGV I +L N P + F + ++ F+DP FL + L
Sbjct: 160 MDVITSTSFGVNIDSL--NNPQDPFVE---NTKKLLRFDFLDPF-----FLSITVFPFLI 209
Query: 244 KSIKVIDDFTY-----SVIKRRKAEIQEARETSDGTKIKYDILTRFIELSEDPESNLTDK 298
++V++ + + +++ ++E+R D K + D L I+ S++ + + K
Sbjct: 210 PILEVLNICVFPREVTNFLRKSVKRMKESR-LEDTQKHRVDFLQLMID-SQNSKETESHK 267
Query: 299 SLRDVVLN-----FVIAGRDTTATTLTWGVYMAMTHNHVAEKLYSELKAFEADRAKEEKA 353
+L D+ L F+ AG +TT++ L++ +Y TH V +KL E+ A ++A
Sbjct: 268 ALSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPP--- 324
Query: 354 SLVQYDKEDLESFNQRVTQFAGLLNYDSMGKLYYLHAVITETLRLYPAVPQDPKGILEDD 413
YD++ ++ YL V+ ETLRL+P + + + + D
Sbjct: 325 ------------------------TYDTVLQMEYLDMVVNETLRLFP-IAMRLERVCKKD 359
Query: 414 VLPDGTKVKAGGMVTYVPYSMGRMEYNWGPDAASFKPERWLKDGVFQNASPFKFTAFQAG 473
V +G + G +V Y++ R W + F PER+ K N P+ +T F +G
Sbjct: 360 VEINGMFIPKGVVVMIPSYALHRDPKYWT-EPEKFLPERFSKKNK-DNIDPYIYTPFGSG 417
Query: 474 PRICLGKDSAYLQMKMALAILCRFFKFKLVPDH--PVKYRMMTILSMEHGLKLTVERR 529
PR C+G A + MK+AL + + F FK + P+K + +L E + L VE R
Sbjct: 418 PRNCIGMRFALMNMKLALIRVLQNFSFKPCKETQIPLKLSLGGLLQPEKPVVLKVESR 475
>pdb|3UA1|A Chain A, Crystal Structure Of The Cytochrome
P4503a4-Bromoergocryptine Complex
pdb|3TJS|A Chain A, Crystal Structure Of The Complex Between Human Cytochrome
P450 3a4 And Desthiazolylmethyloxycarbonyl Ritonavir
Length = 487
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 103/418 (24%), Positives = 188/418 (44%), Gaps = 55/418 (13%)
Query: 124 DGELWRKQRKTASFEFASKNLRDFSTKVFREYSLKLSSILTQASCHNQEIDMQELLMRMT 183
+ E W++ R S F S L++ + +Y L L + + + + ++++ +
Sbjct: 102 EDEEWKRLRSLLSPTFTSGKLKEM-VPIIAQYGDVLVRNLRREAETGKPVTLKDVFGAYS 160
Query: 184 LDSICKVGFGVEIGTLAPNLPDNRFAQAFDTANIIVTLRFIDPLWKIKRFLHLGSEALLD 243
+D I FGV I +L N P + F + ++ F+DP FL + L
Sbjct: 161 MDVITSTSFGVNIDSL--NNPQDPFVE---NTKKLLRFDFLDPF-----FLSITVFPFLI 210
Query: 244 KSIKVIDDFTY-----SVIKRRKAEIQEARETSDGTKIKYDILTRFIELSEDPESNLTDK 298
++V++ + + +++ ++E+R D K + D L I+ S++ + + K
Sbjct: 211 PILEVLNICVFPREVTNFLRKSVKRMKESR-LEDTQKHRVDFLQLMID-SQNSKETESHK 268
Query: 299 SLRDVVLN-----FVIAGRDTTATTLTWGVYMAMTHNHVAEKLYSELKAFEADRAKEEKA 353
+L D+ L F+ AG +TT++ L++ +Y TH V +KL E+ A ++A
Sbjct: 269 ALSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPP--- 325
Query: 354 SLVQYDKEDLESFNQRVTQFAGLLNYDSMGKLYYLHAVITETLRLYPAVPQDPKGILEDD 413
YD++ ++ YL V+ ETLRL+P + + + + D
Sbjct: 326 ------------------------TYDTVLQMEYLDMVVNETLRLFP-IAMRLERVCKKD 360
Query: 414 VLPDGTKVKAGGMVTYVPYSMGRMEYNWGPDAASFKPERWLKDGVFQNASPFKFTAFQAG 473
V +G + G +V Y++ R W + F PER+ K N P+ +T F +G
Sbjct: 361 VEINGMFIPKGVVVMIPSYALHRDPKYWT-EPEKFLPERFSKKNK-DNIDPYIYTPFGSG 418
Query: 474 PRICLGKDSAYLQMKMALAILCRFFKFKLVPDH--PVKYRMMTILSMEHGLKLTVERR 529
PR C+G A + MK+AL + + F FK + P+K + +L E + L VE R
Sbjct: 419 PRNCIGMRFALMNMKLALIRVLQNFSFKPCKETQIPLKLSLGGLLQPEKPVVLKVESR 476
>pdb|1ZOA|A Chain A, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
pdb|1ZOA|B Chain B, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
Length = 473
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 100/402 (24%), Positives = 168/402 (41%), Gaps = 77/402 (19%)
Query: 117 GDGIFN--VDGELWRKQRKTASFEFASKNLRDFSTKVFREYSLKLSSILTQASCH----- 169
GDG+F + W+K L FS + + Y + I Q
Sbjct: 86 GDGLFTSWTHEKNWKKAHNIL--------LPSFSQQAMKGYHAMMVDIAVQLVQKWERLN 137
Query: 170 -NQEIDMQELLMRMTLDSICKVGFGVEIGTLAPNLPD---NRFAQAFDTA-NIIVTLRFI 224
++ I++ E + R+TLD+I GF + + P +A D A N +
Sbjct: 138 ADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPD 197
Query: 225 DPLWKIKRFLHLGSEALLDKSIKVIDDFTYSVIKRRKAEIQEARETSDGTKIKYDILTRF 284
DP + ++ + IKV++D +I RKA + E SD D+LT
Sbjct: 198 DPAYD-------ENKRQFQEDIKVMNDLVDKIIADRKA----SGEQSD------DLLTHM 240
Query: 285 IELSEDPESN--LTDKSLRDVVLNFVIAGRDTTATTLTWGVYMAMTHNHVAEKLYSELKA 342
+ +DPE+ L D+++R ++ F+IAG +TT+ L++ +Y + + HV +K
Sbjct: 241 LN-GKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQK------- 292
Query: 343 FEADRAKEEKASLVQYDKEDLESFNQRVTQFAGLLNYDSMGKLYYLHAVITETLRLYPAV 402
A EE A ++ + +Y + +L Y+ V+ E LRL+P V
Sbjct: 293 -----AAEEAARVL----------------VDPVPSYKQVKQLKYVGMVLNEALRLWPTV 331
Query: 403 PQDPKGILEDDVLPDGTKVKAGGMVTYVPYSMGRMEYNWGPDAASFKPERWLKDGVFQNA 462
P ED VL ++ G + + + R + WG D F+PER F+N
Sbjct: 332 PAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPER------FENP 385
Query: 463 SPF---KFTAFQAGPRICLGKDSAYLQMKMALAILCRFFKFK 501
S F F G R C+G+ A + + L ++ + F F+
Sbjct: 386 SAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 427
>pdb|2NNB|A Chain A, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
pdb|2NNB|B Chain B, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
Length = 471
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 100/402 (24%), Positives = 167/402 (41%), Gaps = 77/402 (19%)
Query: 117 GDGIFN--VDGELWRKQRKTASFEFASKNLRDFSTKVFREYSLKLSSILTQASCH----- 169
GDG+F + W+K L FS + + Y + I Q
Sbjct: 83 GDGLFTSWTHEKNWKKAHNIL--------LPSFSQQAMKGYHAMMVDIAVQLVQKWERLN 134
Query: 170 -NQEIDMQELLMRMTLDSICKVGFGVEIGTLAPNLPD---NRFAQAFDTA-NIIVTLRFI 224
++ I++ E + R+TLD+I GF + + P +A D A N +
Sbjct: 135 ADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPD 194
Query: 225 DPLWKIKRFLHLGSEALLDKSIKVIDDFTYSVIKRRKAEIQEARETSDGTKIKYDILTRF 284
DP + ++ + IKV++D +I RKA + E SD D+LT
Sbjct: 195 DPAYD-------ENKRQFQEDIKVMNDLVDKIIADRKA----SGEQSD------DLLTHM 237
Query: 285 IELSEDPESN--LTDKSLRDVVLNFVIAGRDTTATTLTWGVYMAMTHNHVAEKLYSELKA 342
+ +DPE+ L D+++R ++ F+IAG +TT+ L++ +Y + + HV +K
Sbjct: 238 LN-GKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQK------- 289
Query: 343 FEADRAKEEKASLVQYDKEDLESFNQRVTQFAGLLNYDSMGKLYYLHAVITETLRLYPAV 402
A EE A ++ + +Y + +L Y+ V+ E LRL+P
Sbjct: 290 -----AAEEAARVL----------------VDPVPSYKQVKQLKYVGMVLNEALRLWPTA 328
Query: 403 PQDPKGILEDDVLPDGTKVKAGGMVTYVPYSMGRMEYNWGPDAASFKPERWLKDGVFQNA 462
P ED VL ++ G + + + R + WG D F+PER F+N
Sbjct: 329 PAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPER------FENP 382
Query: 463 SPF---KFTAFQAGPRICLGKDSAYLQMKMALAILCRFFKFK 501
S F F G R C+GK A + + L ++ + F F+
Sbjct: 383 SAIPQHAFKPFGNGQRACIGKQFALHEATLVLGMMLKHFDFE 424
>pdb|2UWH|A Chain A, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|B Chain B, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|C Chain C, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|D Chain D, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|E Chain E, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|F Chain F, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
Length = 458
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 99/408 (24%), Positives = 169/408 (41%), Gaps = 77/408 (18%)
Query: 111 YMEVLLGDGIFN--VDGELWRKQRKTASFEFASKNLRDFSTKVFREYSLKLSSILTQASC 168
++ GDG+F + W+K L FS + + Y + I Q
Sbjct: 77 FVRDFFGDGLFTSWTHEKNWKKAHNIL--------LPSFSQQAMKGYHAMMVDIAVQLVQ 128
Query: 169 H------NQEIDMQELLMRMTLDSICKVGFGVEIGTLAPNLPD---NRFAQAFDTA-NII 218
++ I++ E + R+TLD+I GF + + P +A D A N +
Sbjct: 129 KWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKL 188
Query: 219 VTLRFIDPLWKIKRFLHLGSEALLDKSIKVIDDFTYSVIKRRKAEIQEARETSDGTKIKY 278
DP + ++ + IKV++D +I RKA + E SD
Sbjct: 189 QRANPDDPAYD-------ENKRQFQEDIKVMNDLVDKIIADRKA----SGEQSD------ 231
Query: 279 DILTRFIELSEDPESN--LTDKSLRDVVLNFVIAGRDTTATTLTWGVYMAMTHNHVAEKL 336
D+LT + +DPE+ L D+++R ++ F+IAG +TT+ L++ +Y + + HV +K
Sbjct: 232 DLLTHMLN-GKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQK- 289
Query: 337 YSELKAFEADRAKEEKASLVQYDKEDLESFNQRVTQFAGLLNYDSMGKLYYLHAVITETL 396
A EE A ++ + +Y + +L Y+ V+ E L
Sbjct: 290 -----------AAEEAARVL----------------VDPVPSYKQVKQLKYVGMVLNEAL 322
Query: 397 RLYPAVPQDPKGILEDDVLPDGTKVKAGGMVTYVPYSMGRMEYNWGPDAASFKPERWLKD 456
RL+P P ED VL ++ G + + + R + WG D F+PER
Sbjct: 323 RLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPER---- 378
Query: 457 GVFQNASPF---KFTAFQAGPRICLGKDSAYLQMKMALAILCRFFKFK 501
F+N S F F G R C+G+ A + + L ++ + F F+
Sbjct: 379 --FENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|2BMH|A Chain A, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|2BMH|B Chain B, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|1BU7|A Chain A, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|1BU7|B Chain B, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|2J1M|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J1M|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
Length = 455
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 99/402 (24%), Positives = 167/402 (41%), Gaps = 77/402 (19%)
Query: 117 GDGIFN--VDGELWRKQRKTASFEFASKNLRDFSTKVFREYSLKLSSILTQASCH----- 169
GDG+F + W+K L FS + + Y + I Q
Sbjct: 83 GDGLFTSWTHEKNWKKAHNIL--------LPSFSQQAMKGYHAMMVDIAVQLVQKWERLN 134
Query: 170 -NQEIDMQELLMRMTLDSICKVGFGVEIGTLAPNLPD---NRFAQAFDTA-NIIVTLRFI 224
++ I++ E + R+TLD+I GF + + P +A D A N +
Sbjct: 135 ADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPD 194
Query: 225 DPLWKIKRFLHLGSEALLDKSIKVIDDFTYSVIKRRKAEIQEARETSDGTKIKYDILTRF 284
DP + ++ + IKV++D +I RKA + E SD D+LT
Sbjct: 195 DPAYD-------ENKRQFQEDIKVMNDLVDKIIADRKA----SGEQSD------DLLTHM 237
Query: 285 IELSEDPESN--LTDKSLRDVVLNFVIAGRDTTATTLTWGVYMAMTHNHVAEKLYSELKA 342
+ +DPE+ L D+++R ++ F+IAG +TT+ L++ +Y + + HV +K
Sbjct: 238 LN-GKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQK------- 289
Query: 343 FEADRAKEEKASLVQYDKEDLESFNQRVTQFAGLLNYDSMGKLYYLHAVITETLRLYPAV 402
A EE A ++ + +Y + +L Y+ V+ E LRL+P
Sbjct: 290 -----AAEEAARVL----------------VDPVPSYKQVKQLKYVGMVLNEALRLWPTA 328
Query: 403 PQDPKGILEDDVLPDGTKVKAGGMVTYVPYSMGRMEYNWGPDAASFKPERWLKDGVFQNA 462
P ED VL ++ G + + + R + WG D F+PER F+N
Sbjct: 329 PAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPER------FENP 382
Query: 463 SPF---KFTAFQAGPRICLGKDSAYLQMKMALAILCRFFKFK 501
S F F G R C+G+ A + + L ++ + F F+
Sbjct: 383 SAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|1BVY|A Chain A, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
pdb|1BVY|B Chain B, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
Length = 458
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 99/402 (24%), Positives = 167/402 (41%), Gaps = 77/402 (19%)
Query: 117 GDGIFN--VDGELWRKQRKTASFEFASKNLRDFSTKVFREYSLKLSSILTQASCH----- 169
GDG+F + W+K L FS + + Y + I Q
Sbjct: 83 GDGLFTSWTHEKNWKKAHNIL--------LPSFSQQAMKGYHAMMVDIAVQLVQKWERLN 134
Query: 170 -NQEIDMQELLMRMTLDSICKVGFGVEIGTLAPNLPD---NRFAQAFDTA-NIIVTLRFI 224
++ I++ E + R+TLD+I GF + + P +A D A N +
Sbjct: 135 ADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPD 194
Query: 225 DPLWKIKRFLHLGSEALLDKSIKVIDDFTYSVIKRRKAEIQEARETSDGTKIKYDILTRF 284
DP + ++ + IKV++D +I RKA + E SD D+LT
Sbjct: 195 DPAYD-------ENKRQFQEDIKVMNDLVDKIIADRKA----SGEQSD------DLLTHM 237
Query: 285 IELSEDPESN--LTDKSLRDVVLNFVIAGRDTTATTLTWGVYMAMTHNHVAEKLYSELKA 342
+ +DPE+ L D+++R ++ F+IAG +TT+ L++ +Y + + HV +K
Sbjct: 238 LN-GKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQK------- 289
Query: 343 FEADRAKEEKASLVQYDKEDLESFNQRVTQFAGLLNYDSMGKLYYLHAVITETLRLYPAV 402
A EE A ++ + +Y + +L Y+ V+ E LRL+P
Sbjct: 290 -----AAEEAARVL----------------VDPVPSYKQVKQLKYVGMVLNEALRLWPTA 328
Query: 403 PQDPKGILEDDVLPDGTKVKAGGMVTYVPYSMGRMEYNWGPDAASFKPERWLKDGVFQNA 462
P ED VL ++ G + + + R + WG D F+PER F+N
Sbjct: 329 PAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPER------FENP 382
Query: 463 SPF---KFTAFQAGPRICLGKDSAYLQMKMALAILCRFFKFK 501
S F F G R C+G+ A + + L ++ + F F+
Sbjct: 383 SAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|1JPZ|A Chain A, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1JPZ|B Chain B, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1ZO9|A Chain A, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
pdb|1ZO9|B Chain B, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
Length = 473
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 99/402 (24%), Positives = 167/402 (41%), Gaps = 77/402 (19%)
Query: 117 GDGIFN--VDGELWRKQRKTASFEFASKNLRDFSTKVFREYSLKLSSILTQASCH----- 169
GDG+F + W+K L FS + + Y + I Q
Sbjct: 86 GDGLFTSWTHEKNWKKAHNIL--------LPSFSQQAMKGYHAMMVDIAVQLVQKWERLN 137
Query: 170 -NQEIDMQELLMRMTLDSICKVGFGVEIGTLAPNLPD---NRFAQAFDTA-NIIVTLRFI 224
++ I++ E + R+TLD+I GF + + P +A D A N +
Sbjct: 138 ADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPD 197
Query: 225 DPLWKIKRFLHLGSEALLDKSIKVIDDFTYSVIKRRKAEIQEARETSDGTKIKYDILTRF 284
DP + ++ + IKV++D +I RKA + E SD D+LT
Sbjct: 198 DPAYD-------ENKRQFQEDIKVMNDLVDKIIADRKA----SGEQSD------DLLTHM 240
Query: 285 IELSEDPESN--LTDKSLRDVVLNFVIAGRDTTATTLTWGVYMAMTHNHVAEKLYSELKA 342
+ +DPE+ L D+++R ++ F+IAG +TT+ L++ +Y + + HV +K
Sbjct: 241 LN-GKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQK------- 292
Query: 343 FEADRAKEEKASLVQYDKEDLESFNQRVTQFAGLLNYDSMGKLYYLHAVITETLRLYPAV 402
A EE A ++ + +Y + +L Y+ V+ E LRL+P
Sbjct: 293 -----AAEEAARVL----------------VDPVPSYKQVKQLKYVGMVLNEALRLWPTA 331
Query: 403 PQDPKGILEDDVLPDGTKVKAGGMVTYVPYSMGRMEYNWGPDAASFKPERWLKDGVFQNA 462
P ED VL ++ G + + + R + WG D F+PER F+N
Sbjct: 332 PAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPER------FENP 385
Query: 463 SPF---KFTAFQAGPRICLGKDSAYLQMKMALAILCRFFKFK 501
S F F G R C+G+ A + + L ++ + F F+
Sbjct: 386 SAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 427
>pdb|3BEN|A Chain A, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
pdb|3BEN|B Chain B, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
Length = 470
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 99/402 (24%), Positives = 167/402 (41%), Gaps = 77/402 (19%)
Query: 117 GDGIFN--VDGELWRKQRKTASFEFASKNLRDFSTKVFREYSLKLSSILTQASCH----- 169
GDG+F + W+K L FS + + Y + I Q
Sbjct: 84 GDGLFTSWTHEKNWKKAHNIL--------LPSFSQQAMKGYHAMMVDIAVQLVQKWERLN 135
Query: 170 -NQEIDMQELLMRMTLDSICKVGFGVEIGTLAPNLPD---NRFAQAFDTA-NIIVTLRFI 224
++ I++ E + R+TLD+I GF + + P +A D A N +
Sbjct: 136 ADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPD 195
Query: 225 DPLWKIKRFLHLGSEALLDKSIKVIDDFTYSVIKRRKAEIQEARETSDGTKIKYDILTRF 284
DP + ++ + IKV++D +I RKA + E SD D+LT
Sbjct: 196 DPAYD-------ENKRQFQEDIKVMNDLVDKIIADRKA----SGEQSD------DLLTHM 238
Query: 285 IELSEDPESN--LTDKSLRDVVLNFVIAGRDTTATTLTWGVYMAMTHNHVAEKLYSELKA 342
+ +DPE+ L D+++R ++ F+IAG +TT+ L++ +Y + + HV +K
Sbjct: 239 LN-GKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQK------- 290
Query: 343 FEADRAKEEKASLVQYDKEDLESFNQRVTQFAGLLNYDSMGKLYYLHAVITETLRLYPAV 402
A EE A ++ + +Y + +L Y+ V+ E LRL+P
Sbjct: 291 -----AAEEAARVL----------------VDPVPSYKQVKQLKYVGMVLNEALRLWPTA 329
Query: 403 PQDPKGILEDDVLPDGTKVKAGGMVTYVPYSMGRMEYNWGPDAASFKPERWLKDGVFQNA 462
P ED VL ++ G + + + R + WG D F+PER F+N
Sbjct: 330 PAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPER------FENP 383
Query: 463 SPF---KFTAFQAGPRICLGKDSAYLQMKMALAILCRFFKFK 501
S F F G R C+G+ A + + L ++ + F F+
Sbjct: 384 SAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 425
>pdb|3M4V|A Chain A, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
pdb|3M4V|B Chain B, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 99/402 (24%), Positives = 167/402 (41%), Gaps = 77/402 (19%)
Query: 117 GDGIFN--VDGELWRKQRKTASFEFASKNLRDFSTKVFREYSLKLSSILTQASCH----- 169
GDG+F + W+K L FS + + Y + I Q
Sbjct: 84 GDGLFTSWTHEKNWKKAHNIL--------LPSFSQQAMKGYHAMMVDIAVQLVQKWERLN 135
Query: 170 -NQEIDMQELLMRMTLDSICKVGFGVEIGTLAPNLPD---NRFAQAFDTA-NIIVTLRFI 224
++ I++ E + R+TLD+I GF + + P +A D A N +
Sbjct: 136 ADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPD 195
Query: 225 DPLWKIKRFLHLGSEALLDKSIKVIDDFTYSVIKRRKAEIQEARETSDGTKIKYDILTRF 284
DP + ++ + IKV++D +I RKA + E SD D+LT
Sbjct: 196 DPAYD-------ENKRQFQEDIKVMNDLVDKIIADRKA----SGEQSD------DLLTHM 238
Query: 285 IELSEDPESN--LTDKSLRDVVLNFVIAGRDTTATTLTWGVYMAMTHNHVAEKLYSELKA 342
+ +DPE+ L D+++R ++ F+IAG +TT+ L++ +Y + + HV +K
Sbjct: 239 LN-GKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQK------- 290
Query: 343 FEADRAKEEKASLVQYDKEDLESFNQRVTQFAGLLNYDSMGKLYYLHAVITETLRLYPAV 402
A EE A ++ + +Y + +L Y+ V+ E LRL+P
Sbjct: 291 -----AAEEAARVL----------------VDPVPSYKQVKQLKYVGMVLNEALRLWPTA 329
Query: 403 PQDPKGILEDDVLPDGTKVKAGGMVTYVPYSMGRMEYNWGPDAASFKPERWLKDGVFQNA 462
P ED VL ++ G + + + R + WG D F+PER F+N
Sbjct: 330 PPFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPER------FENP 383
Query: 463 SPFK---FTAFQAGPRICLGKDSAYLQMKMALAILCRFFKFK 501
S F F G R C+G+ A + + L ++ + F F+
Sbjct: 384 SAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 425
>pdb|2IJ2|A Chain A, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
pdb|2IJ2|B Chain B, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
Length = 470
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 99/402 (24%), Positives = 167/402 (41%), Gaps = 77/402 (19%)
Query: 117 GDGIFN--VDGELWRKQRKTASFEFASKNLRDFSTKVFREYSLKLSSILTQASCH----- 169
GDG+F + W+K L FS + + Y + I Q
Sbjct: 83 GDGLFTSWTHEKNWKKAHNIL--------LPSFSQQAMKGYHAMMVDIAVQLVQKWERLN 134
Query: 170 -NQEIDMQELLMRMTLDSICKVGFGVEIGTLAPNLPD---NRFAQAFDTA-NIIVTLRFI 224
++ I++ E + R+TLD+I GF + + P +A D A N +
Sbjct: 135 ADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPD 194
Query: 225 DPLWKIKRFLHLGSEALLDKSIKVIDDFTYSVIKRRKAEIQEARETSDGTKIKYDILTRF 284
DP + ++ + IKV++D +I RKA + E SD D+LT
Sbjct: 195 DPAYD-------ENKRQFQEDIKVMNDLVDKIIADRKA----SGEQSD------DLLTHM 237
Query: 285 IELSEDPESN--LTDKSLRDVVLNFVIAGRDTTATTLTWGVYMAMTHNHVAEKLYSELKA 342
+ +DPE+ L D+++R ++ F+IAG +TT+ L++ +Y + + HV +K
Sbjct: 238 LN-GKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQK------- 289
Query: 343 FEADRAKEEKASLVQYDKEDLESFNQRVTQFAGLLNYDSMGKLYYLHAVITETLRLYPAV 402
A EE A ++ + +Y + +L Y+ V+ E LRL+P
Sbjct: 290 -----AAEEAARVL----------------VDPVPSYKQVKQLKYVGMVLNEALRLWPTA 328
Query: 403 PQDPKGILEDDVLPDGTKVKAGGMVTYVPYSMGRMEYNWGPDAASFKPERWLKDGVFQNA 462
P ED VL ++ G + + + R + WG D F+PER F+N
Sbjct: 329 PAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPER------FENP 382
Query: 463 SPF---KFTAFQAGPRICLGKDSAYLQMKMALAILCRFFKFK 501
S F F G R C+G+ A + + L ++ + F F+
Sbjct: 383 SAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|3PSX|A Chain A, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
pdb|3PSX|B Chain B, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
Length = 487
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 99/402 (24%), Positives = 167/402 (41%), Gaps = 77/402 (19%)
Query: 117 GDGIFN--VDGELWRKQRKTASFEFASKNLRDFSTKVFREYSLKLSSILTQASCH----- 169
GDG+F + W+K L FS + + Y + I Q
Sbjct: 89 GDGLFTSWTHEKNWKKAHNIL--------LPSFSQQAMKGYHAMMVDIAVQLVQKWERLN 140
Query: 170 -NQEIDMQELLMRMTLDSICKVGFGVEIGTLAPNLPD---NRFAQAFDTA-NIIVTLRFI 224
++ I++ E + R+TLD+I GF + + P +A D A N +
Sbjct: 141 ADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRTNPD 200
Query: 225 DPLWKIKRFLHLGSEALLDKSIKVIDDFTYSVIKRRKAEIQEARETSDGTKIKYDILTRF 284
DP + ++ + IKV++D +I RKA + E SD D+LT
Sbjct: 201 DPAYD-------ENKRQFQEDIKVMNDLVDKIIADRKA----SGEQSD------DLLTHM 243
Query: 285 IELSEDPESN--LTDKSLRDVVLNFVIAGRDTTATTLTWGVYMAMTHNHVAEKLYSELKA 342
+ +DPE+ L D+++R ++ F+IAG +TT+ L++ +Y + + HV +K
Sbjct: 244 LH-GKDPETGEPLDDENIRYQIVTFLIAGHETTSGLLSFTLYFLVKNPHVLQK------- 295
Query: 343 FEADRAKEEKASLVQYDKEDLESFNQRVTQFAGLLNYDSMGKLYYLHAVITETLRLYPAV 402
A EE A ++ + +Y + +L Y+ V+ E LRL+P
Sbjct: 296 -----AAEEAARVL----------------VDPVPSYKQVKQLKYVGMVLNEALRLWPTA 334
Query: 403 PQDPKGILEDDVLPDGTKVKAGGMVTYVPYSMGRMEYNWGPDAASFKPERWLKDGVFQNA 462
P ED VL ++ G + + + R + WG D F+PER F+N
Sbjct: 335 PAFSLYAKEDTVLGGEYPLEKGDEIMVLIPQLHRDKTIWGDDVEEFRPER------FENP 388
Query: 463 SPFK---FTAFQAGPRICLGKDSAYLQMKMALAILCRFFKFK 501
S F F G R C+G+ A + + L ++ + F F+
Sbjct: 389 SAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 430
>pdb|1P0W|A Chain A, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0W|B Chain B, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 99/402 (24%), Positives = 168/402 (41%), Gaps = 77/402 (19%)
Query: 117 GDGIFN--VDGELWRKQRKTASFEFASKNLRDFSTKVFREYSLKLSSILTQASCH----- 169
GDG+F + W+K L FS + + Y + I Q
Sbjct: 83 GDGLFTSWTHEKNWKKAHNIL--------LPSFSQQAMKGYHAMMVDIAVQLVQKWERLN 134
Query: 170 -NQEIDMQELLMRMTLDSICKVGFGVEIGTLAPNLPD---NRFAQAFDTA-NIIVTLRFI 224
++ I++ E + R+TLD+I GF + + P +A D A N +
Sbjct: 135 ADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPD 194
Query: 225 DPLWKIKRFLHLGSEALLDKSIKVIDDFTYSVIKRRKAEIQEARETSDGTKIKYDILTRF 284
DP + ++ + IKV++D +I RKA + E SD D+LT
Sbjct: 195 DPAYD-------ENKRQFQEDIKVMNDLVDKIIADRKA----SGEQSD------DLLTHM 237
Query: 285 IELSEDPESN--LTDKSLRDVVLNFVIAGRDTTATTLTWGVYMAMTHNHVAEKLYSELKA 342
+ +DPE+ L D+++R ++ F+IAG +TT+ L++ +Y + + HV +K
Sbjct: 238 LN-GKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQK------- 289
Query: 343 FEADRAKEEKASLVQYDKEDLESFNQRVTQFAGLLNYDSMGKLYYLHAVITETLRLYPAV 402
A EE A ++ + +Y + +L Y+ V+ E LRL+P
Sbjct: 290 -----AAEEAARVL----------------VDPVPSYKQVKQLKYVGMVLNEALRLWPTA 328
Query: 403 PQDPKGILEDDVLPDGTKVKAGGMVTYVPYSMGRMEYNWGPDAASFKPERWLKDGVFQNA 462
P ED VL ++ G + + + R + WG D F+PER F+N
Sbjct: 329 PAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPER------FENP 382
Query: 463 SPFKFTAFQA---GPRICLGKDSAYLQMKMALAILCRFFKFK 501
S AF+ G R C+G+ A + + L ++ + F F+
Sbjct: 383 SAIPQHAFKPWGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|2HPD|A Chain A, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|2HPD|B Chain B, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|1FAG|A Chain A, Structure Of Cytochrome P450
pdb|1FAG|B Chain B, Structure Of Cytochrome P450
pdb|1FAG|C Chain C, Structure Of Cytochrome P450
pdb|1FAG|D Chain D, Structure Of Cytochrome P450
Length = 471
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 99/402 (24%), Positives = 167/402 (41%), Gaps = 77/402 (19%)
Query: 117 GDGIFN--VDGELWRKQRKTASFEFASKNLRDFSTKVFREYSLKLSSILTQASCH----- 169
GDG+F + W+K L FS + + Y + I Q
Sbjct: 83 GDGLFTSWTHEKNWKKAHNIL--------LPSFSQQAMKGYHAMMVDIAVQLVQKWERLN 134
Query: 170 -NQEIDMQELLMRMTLDSICKVGFGVEIGTLAPNLPD---NRFAQAFDTA-NIIVTLRFI 224
++ I++ E + R+TLD+I GF + + P +A D A N +
Sbjct: 135 ADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPD 194
Query: 225 DPLWKIKRFLHLGSEALLDKSIKVIDDFTYSVIKRRKAEIQEARETSDGTKIKYDILTRF 284
DP + ++ + IKV++D +I RKA + E SD D+LT
Sbjct: 195 DPAYD-------ENKRQFQEDIKVMNDLVDKIIADRKA----SGEQSD------DLLTHM 237
Query: 285 IELSEDPESN--LTDKSLRDVVLNFVIAGRDTTATTLTWGVYMAMTHNHVAEKLYSELKA 342
+ +DPE+ L D+++R ++ F+IAG +TT+ L++ +Y + + HV +K
Sbjct: 238 LN-GKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQK------- 289
Query: 343 FEADRAKEEKASLVQYDKEDLESFNQRVTQFAGLLNYDSMGKLYYLHAVITETLRLYPAV 402
A EE A ++ + +Y + +L Y+ V+ E LRL+P
Sbjct: 290 -----AAEEAARVL----------------VDPVPSYKQVKQLKYVGMVLNEALRLWPTA 328
Query: 403 PQDPKGILEDDVLPDGTKVKAGGMVTYVPYSMGRMEYNWGPDAASFKPERWLKDGVFQNA 462
P ED VL ++ G + + + R + WG D F+PER F+N
Sbjct: 329 PAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPER------FENP 382
Query: 463 SPF---KFTAFQAGPRICLGKDSAYLQMKMALAILCRFFKFK 501
S F F G R C+G+ A + + L ++ + F F+
Sbjct: 383 SAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|1JME|A Chain A, Crystal Structure Of Phe393his Cytochrome P450 Bm3
pdb|1JME|B Chain B, Crystal Structure Of Phe393his Cytochrome P450 Bm3
Length = 455
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 99/402 (24%), Positives = 168/402 (41%), Gaps = 77/402 (19%)
Query: 117 GDGIFN--VDGELWRKQRKTASFEFASKNLRDFSTKVFREYSLKLSSILTQASCH----- 169
GDG+F + W+K L FS + + Y + I Q
Sbjct: 83 GDGLFTSWTHEKNWKKAHNIL--------LPSFSQQAMKGYHAMMVDIAVQLVQKWERLN 134
Query: 170 -NQEIDMQELLMRMTLDSICKVGFGVEIGTLAPNLPD---NRFAQAFDTA-NIIVTLRFI 224
++ I++ E + R+TLD+I GF + + P +A D A N +
Sbjct: 135 ADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPD 194
Query: 225 DPLWKIKRFLHLGSEALLDKSIKVIDDFTYSVIKRRKAEIQEARETSDGTKIKYDILTRF 284
DP + ++ + IKV++D +I RKA + E SD D+LT
Sbjct: 195 DPAYD-------ENKRQFQEDIKVMNDLVDKIIADRKA----SGEQSD------DLLTHM 237
Query: 285 IELSEDPESN--LTDKSLRDVVLNFVIAGRDTTATTLTWGVYMAMTHNHVAEKLYSELKA 342
+ +DPE+ L D+++R ++ F+IAG +TT+ L++ +Y + + HV +K
Sbjct: 238 LN-GKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQK------- 289
Query: 343 FEADRAKEEKASLVQYDKEDLESFNQRVTQFAGLLNYDSMGKLYYLHAVITETLRLYPAV 402
A EE A ++ + +Y + +L Y+ V+ E LRL+P
Sbjct: 290 -----AAEEAARVL----------------VDPVPSYKQVKQLKYVGMVLNEALRLWPTA 328
Query: 403 PQDPKGILEDDVLPDGTKVKAGGMVTYVPYSMGRMEYNWGPDAASFKPERWLKDGVFQNA 462
P ED VL ++ G + + + R + WG D F+PER F+N
Sbjct: 329 PAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPER------FENP 382
Query: 463 SPFKFTAFQA---GPRICLGKDSAYLQMKMALAILCRFFKFK 501
S AF+ G R C+G+ A + + L ++ + F F+
Sbjct: 383 SAIPQHAFKPHGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|1P0X|A Chain A, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0X|B Chain B, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 99/402 (24%), Positives = 168/402 (41%), Gaps = 77/402 (19%)
Query: 117 GDGIFN--VDGELWRKQRKTASFEFASKNLRDFSTKVFREYSLKLSSILTQASCH----- 169
GDG+F + W+K L FS + + Y + I Q
Sbjct: 83 GDGLFTSWTHEKNWKKAHNIL--------LPSFSQQAMKGYHAMMVDIAVQLVQKWERLN 134
Query: 170 -NQEIDMQELLMRMTLDSICKVGFGVEIGTLAPNLPD---NRFAQAFDTA-NIIVTLRFI 224
++ I++ E + R+TLD+I GF + + P +A D A N +
Sbjct: 135 ADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPD 194
Query: 225 DPLWKIKRFLHLGSEALLDKSIKVIDDFTYSVIKRRKAEIQEARETSDGTKIKYDILTRF 284
DP + ++ + IKV++D +I RKA + E SD D+LT
Sbjct: 195 DPAYD-------ENKRQFQEDIKVMNDLVDKIIADRKA----SGEQSD------DLLTHM 237
Query: 285 IELSEDPESN--LTDKSLRDVVLNFVIAGRDTTATTLTWGVYMAMTHNHVAEKLYSELKA 342
+ +DPE+ L D+++R ++ F+IAG +TT+ L++ +Y + + HV +K
Sbjct: 238 LN-GKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQK------- 289
Query: 343 FEADRAKEEKASLVQYDKEDLESFNQRVTQFAGLLNYDSMGKLYYLHAVITETLRLYPAV 402
A EE A ++ + +Y + +L Y+ V+ E LRL+P
Sbjct: 290 -----AAEEAARVL----------------VDPVPSYKQVKQLKYVGMVLNEALRLWPTA 328
Query: 403 PQDPKGILEDDVLPDGTKVKAGGMVTYVPYSMGRMEYNWGPDAASFKPERWLKDGVFQNA 462
P ED VL ++ G + + + R + WG D F+PER F+N
Sbjct: 329 PAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPER------FENP 382
Query: 463 SPFKFTAFQA---GPRICLGKDSAYLQMKMALAILCRFFKFK 501
S AF+ G R C+G+ A + + L ++ + F F+
Sbjct: 383 SAIPQHAFKPYGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|1P0V|A Chain A, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0V|B Chain B, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 99/402 (24%), Positives = 168/402 (41%), Gaps = 77/402 (19%)
Query: 117 GDGIFN--VDGELWRKQRKTASFEFASKNLRDFSTKVFREYSLKLSSILTQASCH----- 169
GDG+F + W+K L FS + + Y + I Q
Sbjct: 83 GDGLFTSWTHEKNWKKAHNIL--------LPSFSQQAMKGYHAMMVDIAVQLVQKWERLN 134
Query: 170 -NQEIDMQELLMRMTLDSICKVGFGVEIGTLAPNLPD---NRFAQAFDTA-NIIVTLRFI 224
++ I++ E + R+TLD+I GF + + P +A D A N +
Sbjct: 135 ADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPD 194
Query: 225 DPLWKIKRFLHLGSEALLDKSIKVIDDFTYSVIKRRKAEIQEARETSDGTKIKYDILTRF 284
DP + ++ + IKV++D +I RKA + E SD D+LT
Sbjct: 195 DPAYD-------ENKRQFQEDIKVMNDLVDKIIADRKA----SGEQSD------DLLTHM 237
Query: 285 IELSEDPESN--LTDKSLRDVVLNFVIAGRDTTATTLTWGVYMAMTHNHVAEKLYSELKA 342
+ +DPE+ L D+++R ++ F+IAG +TT+ L++ +Y + + HV +K
Sbjct: 238 LN-GKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQK------- 289
Query: 343 FEADRAKEEKASLVQYDKEDLESFNQRVTQFAGLLNYDSMGKLYYLHAVITETLRLYPAV 402
A EE A ++ + +Y + +L Y+ V+ E LRL+P
Sbjct: 290 -----AAEEAARVL----------------VDPVPSYKQVKQLKYVGMVLNEALRLWPTA 328
Query: 403 PQDPKGILEDDVLPDGTKVKAGGMVTYVPYSMGRMEYNWGPDAASFKPERWLKDGVFQNA 462
P ED VL ++ G + + + R + WG D F+PER F+N
Sbjct: 329 PAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPER------FENP 382
Query: 463 SPFKFTAFQA---GPRICLGKDSAYLQMKMALAILCRFFKFK 501
S AF+ G R C+G+ A + + L ++ + F F+
Sbjct: 383 SAIPQHAFKPAGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|1ZO4|A Chain A, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
pdb|1ZO4|B Chain B, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
Length = 473
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 99/402 (24%), Positives = 167/402 (41%), Gaps = 77/402 (19%)
Query: 117 GDGIFN--VDGELWRKQRKTASFEFASKNLRDFSTKVFREYSLKLSSILTQASCH----- 169
GDG+F + W+K L FS + + Y + I Q
Sbjct: 86 GDGLFTSWTHEKNWKKAHNIL--------LPSFSQQAMKGYHAMMVDIAVQLVQKWERLN 137
Query: 170 -NQEIDMQELLMRMTLDSICKVGFGVEIGTLAPNLPD---NRFAQAFDTA-NIIVTLRFI 224
++ I++ E + R+TLD+I GF + + P +A D A N +
Sbjct: 138 ADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPD 197
Query: 225 DPLWKIKRFLHLGSEALLDKSIKVIDDFTYSVIKRRKAEIQEARETSDGTKIKYDILTRF 284
DP + ++ + IKV++D +I RKA + E SD D+LT
Sbjct: 198 DPAYD-------ENKRQFQEDIKVMNDLVDKIIADRKA----SGEQSD------DLLTHM 240
Query: 285 IELSEDPESN--LTDKSLRDVVLNFVIAGRDTTATTLTWGVYMAMTHNHVAEKLYSELKA 342
+ +DPE+ L D+++R ++ F+IAG +TT+ L++ +Y + + HV +K
Sbjct: 241 LN-GKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQK------- 292
Query: 343 FEADRAKEEKASLVQYDKEDLESFNQRVTQFAGLLNYDSMGKLYYLHAVITETLRLYPAV 402
A EE A ++ + +Y + +L Y+ V+ E LRL+P
Sbjct: 293 -----AAEEAARVL----------------VDPVPSYKQVKQLKYVGMVLNEALRLWPTS 331
Query: 403 PQDPKGILEDDVLPDGTKVKAGGMVTYVPYSMGRMEYNWGPDAASFKPERWLKDGVFQNA 462
P ED VL ++ G + + + R + WG D F+PER F+N
Sbjct: 332 PAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPER------FENP 385
Query: 463 SPF---KFTAFQAGPRICLGKDSAYLQMKMALAILCRFFKFK 501
S F F G R C+G+ A + + L ++ + F F+
Sbjct: 386 SAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 427
>pdb|2X7Y|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X7Y|B Chain B, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|B Chain B, P450 Bm3 F87a In Complex With Dmso
Length = 455
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 93/373 (24%), Positives = 158/373 (42%), Gaps = 67/373 (17%)
Query: 144 LRDFSTKVFREYSLKLSSILTQASCH------NQEIDMQELLMRMTLDSICKVGFGVEIG 197
L FS + + Y + I Q ++ I++ E + R+TLD+I GF
Sbjct: 104 LPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFN 163
Query: 198 TLAPNLPD---NRFAQAFDTA-NIIVTLRFIDPLWKIKRFLHLGSEALLDKSIKVIDDFT 253
+ + P +A D A N + DP + ++ + IKV++D
Sbjct: 164 SFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYD-------ENKRQFQEDIKVMNDLV 216
Query: 254 YSVIKRRKAEIQEARETSDGTKIKYDILTRFIELSEDPESN--LTDKSLRDVVLNFVIAG 311
+I RKA + E SD D+LT + +DPE+ L D+++R ++ F+IAG
Sbjct: 217 DKIIADRKA----SGEQSD------DLLTHMLN-GKDPETGEPLDDENIRYQIITFLIAG 265
Query: 312 RDTTATTLTWGVYMAMTHNHVAEKLYSELKAFEADRAKEEKASLVQYDKEDLESFNQRVT 371
+TT+ L++ +Y + + HV +K A EE A ++
Sbjct: 266 HETTSGLLSFALYFLVKNPHVLQK------------AAEEAARVL--------------- 298
Query: 372 QFAGLLNYDSMGKLYYLHAVITETLRLYPAVPQDPKGILEDDVLPDGTKVKAGGMVTYVP 431
+ +Y + +L Y+ V+ E LRL+P P ED VL ++ G + +
Sbjct: 299 -VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLI 357
Query: 432 YSMGRMEYNWGPDAASFKPERWLKDGVFQNASPF---KFTAFQAGPRICLGKDSAYLQMK 488
+ R + WG D F+PER F+N S F F G R C+G+ A +
Sbjct: 358 PQLHRDKTIWGDDVEEFRPER------FENPSAIPQHAFKPFGNGQRACIGQQFALHEAT 411
Query: 489 MALAILCRFFKFK 501
+ L ++ + F F+
Sbjct: 412 LVLGMMLKHFDFE 424
>pdb|3KX3|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX3|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 93/373 (24%), Positives = 158/373 (42%), Gaps = 67/373 (17%)
Query: 144 LRDFSTKVFREYSLKLSSILTQASCH------NQEIDMQELLMRMTLDSICKVGFGVEIG 197
L FS + + Y + I Q ++ I++ E + R+TLD+I GF
Sbjct: 104 LPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFN 163
Query: 198 TLAPNLPD---NRFAQAFDTA-NIIVTLRFIDPLWKIKRFLHLGSEALLDKSIKVIDDFT 253
+ + P +A D A N + DP + ++ + IKV++D
Sbjct: 164 SFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYD-------ENKRQFQEDIKVMNDLV 216
Query: 254 YSVIKRRKAEIQEARETSDGTKIKYDILTRFIELSEDPESN--LTDKSLRDVVLNFVIAG 311
+I RKA + E SD D+LT + +DPE+ L D+++R ++ F+IAG
Sbjct: 217 DKIIADRKA----SGEQSD------DLLTHMLN-GKDPETGEPLDDENIRYQIITFLIAG 265
Query: 312 RDTTATTLTWGVYMAMTHNHVAEKLYSELKAFEADRAKEEKASLVQYDKEDLESFNQRVT 371
+TT+ L++ +Y + + HV +K A EE A ++
Sbjct: 266 HETTSGLLSFALYFLVKNPHVLQK------------AAEEAARVL--------------- 298
Query: 372 QFAGLLNYDSMGKLYYLHAVITETLRLYPAVPQDPKGILEDDVLPDGTKVKAGGMVTYVP 431
+ +Y + +L Y+ V+ E LRL+P P ED VL ++ G + +
Sbjct: 299 -VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLI 357
Query: 432 YSMGRMEYNWGPDAASFKPERWLKDGVFQNASPF---KFTAFQAGPRICLGKDSAYLQMK 488
+ R + WG D F+PER F+N S F F G R C+G+ A +
Sbjct: 358 PQLHRDKTIWGDDVEEFRPER------FENPSAIPQHAFKPFGNGQRACIGQQFALHEAT 411
Query: 489 MALAILCRFFKFK 501
+ L ++ + F F+
Sbjct: 412 LVLGMMLKHFDFE 424
>pdb|1YQP|A Chain A, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
pdb|1YQP|B Chain B, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 98/402 (24%), Positives = 166/402 (41%), Gaps = 77/402 (19%)
Query: 117 GDGIFN--VDGELWRKQRKTASFEFASKNLRDFSTKVFREYSLKLSSILTQASCH----- 169
GDG+F + W+K L FS + + Y + I Q
Sbjct: 83 GDGLFTSWTHEKNWKKAHNIL--------LPSFSQQAMKGYHAMMVDIAVQLVQKWERLN 134
Query: 170 -NQEIDMQELLMRMTLDSICKVGFGVEIGTLAPNLPD---NRFAQAFDTA-NIIVTLRFI 224
++ I++ E + R+TLD+I GF + + P +A D A N +
Sbjct: 135 ADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPD 194
Query: 225 DPLWKIKRFLHLGSEALLDKSIKVIDDFTYSVIKRRKAEIQEARETSDGTKIKYDILTRF 284
DP + ++ + IKV++D +I RKA + E SD D+LT
Sbjct: 195 DPAYD-------ENKRQFQEDIKVMNDLVDKIIADRKA----SGEQSD------DLLTHM 237
Query: 285 IELSEDPESN--LTDKSLRDVVLNFVIAGRDTTATTLTWGVYMAMTHNHVAEKLYSELKA 342
+ +DPE+ L D+++R ++ F+IAG + T+ L++ +Y + + HV +K
Sbjct: 238 LN-GKDPETGEPLDDENIRYQIITFLIAGHENTSGLLSFALYFLVKNPHVLQK------- 289
Query: 343 FEADRAKEEKASLVQYDKEDLESFNQRVTQFAGLLNYDSMGKLYYLHAVITETLRLYPAV 402
A EE A ++ + +Y + +L Y+ V+ E LRL+P
Sbjct: 290 -----AAEEAARVL----------------VDPVPSYKQVKQLKYVGMVLNEALRLWPTA 328
Query: 403 PQDPKGILEDDVLPDGTKVKAGGMVTYVPYSMGRMEYNWGPDAASFKPERWLKDGVFQNA 462
P ED VL ++ G + + + R + WG D F+PER F+N
Sbjct: 329 PAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPER------FENP 382
Query: 463 SPF---KFTAFQAGPRICLGKDSAYLQMKMALAILCRFFKFK 501
S F F G R C+G+ A + + L ++ + F F+
Sbjct: 383 SAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|3NPL|A Chain A, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
pdb|3NPL|B Chain B, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
Length = 470
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 93/373 (24%), Positives = 158/373 (42%), Gaps = 67/373 (17%)
Query: 144 LRDFSTKVFREYSLKLSSILTQASCH------NQEIDMQELLMRMTLDSICKVGFGVEIG 197
L FS + + Y + I Q ++ I++ E + R+TLD+I GF
Sbjct: 105 LPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLSGFNYRFN 164
Query: 198 TLAPNLPD---NRFAQAFDTA-NIIVTLRFIDPLWKIKRFLHLGSEALLDKSIKVIDDFT 253
+ + P +A D A N + DP + ++ + IKV++D
Sbjct: 165 SFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYD-------ENKRQFQEDIKVMNDLV 217
Query: 254 YSVIKRRKAEIQEARETSDGTKIKYDILTRFIELSEDPESN--LTDKSLRDVVLNFVIAG 311
+I RKA + E SD D+LT + +DPE+ L D+++R ++ F+IAG
Sbjct: 218 DKIIADRKA----SGEQSD------DLLTHMLN-GKDPETGEPLDDENIRYQIITFLIAG 266
Query: 312 RDTTATTLTWGVYMAMTHNHVAEKLYSELKAFEADRAKEEKASLVQYDKEDLESFNQRVT 371
+TT+ L++ +Y + + HV +K A EE A ++
Sbjct: 267 HETTSGLLSFALYFLVKNPHVLQK------------AAEEAARVL--------------- 299
Query: 372 QFAGLLNYDSMGKLYYLHAVITETLRLYPAVPQDPKGILEDDVLPDGTKVKAGGMVTYVP 431
+ +Y + +L Y+ V+ E LRL+P P ED VL ++ G + +
Sbjct: 300 -VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLI 358
Query: 432 YSMGRMEYNWGPDAASFKPERWLKDGVFQNASPF---KFTAFQAGPRICLGKDSAYLQMK 488
+ R + WG D F+PER F+N S F F G R C+G+ A +
Sbjct: 359 PQLHRDKTIWGDDVEEFRPER------FENPSAIPQHAFKPFGNGQRACIGQQFALHEAT 412
Query: 489 MALAILCRFFKFK 501
+ L ++ + F F+
Sbjct: 413 LVLGMMLKHFDFE 425
>pdb|1YQO|A Chain A, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1YQO|B Chain B, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 98/402 (24%), Positives = 166/402 (41%), Gaps = 77/402 (19%)
Query: 117 GDGIFN--VDGELWRKQRKTASFEFASKNLRDFSTKVFREYSLKLSSILTQASCH----- 169
GDG+F + W+K L FS + + Y + I Q
Sbjct: 83 GDGLFTSWTHEKNWKKAHNIL--------LPSFSQQAMKGYHAMMVDIAVQLVQKWERLN 134
Query: 170 -NQEIDMQELLMRMTLDSICKVGFGVEIGTLAPNLPD---NRFAQAFDTA-NIIVTLRFI 224
++ I++ E + R+TLD+I GF + + P +A D A N +
Sbjct: 135 ADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPD 194
Query: 225 DPLWKIKRFLHLGSEALLDKSIKVIDDFTYSVIKRRKAEIQEARETSDGTKIKYDILTRF 284
DP + ++ + IKV++D +I RKA + E SD D+LT
Sbjct: 195 DPAYD-------ENKRQFQEDIKVMNDLVDKIIADRKA----SGEQSD------DLLTHM 237
Query: 285 IELSEDPESN--LTDKSLRDVVLNFVIAGRDTTATTLTWGVYMAMTHNHVAEKLYSELKA 342
+ +DPE+ L D+++R ++ F+IAG + T+ L++ +Y + + HV +K
Sbjct: 238 LN-GKDPETGEPLDDENIRYQIITFLIAGHEATSGLLSFALYFLVKNPHVLQK------- 289
Query: 343 FEADRAKEEKASLVQYDKEDLESFNQRVTQFAGLLNYDSMGKLYYLHAVITETLRLYPAV 402
A EE A ++ + +Y + +L Y+ V+ E LRL+P
Sbjct: 290 -----AAEEAARVL----------------VDPVPSYKQVKQLKYVGMVLNEALRLWPTA 328
Query: 403 PQDPKGILEDDVLPDGTKVKAGGMVTYVPYSMGRMEYNWGPDAASFKPERWLKDGVFQNA 462
P ED VL ++ G + + + R + WG D F+PER F+N
Sbjct: 329 PAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPER------FENP 382
Query: 463 SPF---KFTAFQAGPRICLGKDSAYLQMKMALAILCRFFKFK 501
S F F G R C+G+ A + + L ++ + F F+
Sbjct: 383 SAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|3EKB|A Chain A, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
pdb|3EKB|B Chain B, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
Length = 470
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 98/402 (24%), Positives = 166/402 (41%), Gaps = 77/402 (19%)
Query: 117 GDGIFN--VDGELWRKQRKTASFEFASKNLRDFSTKVFREYSLKLSSILTQASCH----- 169
GDG+F + W+K L FS + + Y + I Q
Sbjct: 83 GDGLFTSWTHEKNWKKAHNIL--------LPSFSQQAMKGYHAMMVDIAVQLVQKWERLN 134
Query: 170 -NQEIDMQELLMRMTLDSICKVGFGVEIGTLAPNLPD---NRFAQAFDTA-NIIVTLRFI 224
++ I++ E + R+TLD+I GF + + P +A D A N +
Sbjct: 135 ADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPD 194
Query: 225 DPLWKIKRFLHLGSEALLDKSIKVIDDFTYSVIKRRKAEIQEARETSDGTKIKYDILTRF 284
DP + ++ + IKV++D +I RKA + E SD D+LT
Sbjct: 195 DPAYD-------ENKRQFQEDIKVMNDLVDKIIADRKA----SGEQSD------DLLTHM 237
Query: 285 IELSEDPESN--LTDKSLRDVVLNFVIAGRDTTATTLTWGVYMAMTHNHVAEKLYSELKA 342
+ +DPE+ L D+++R ++ F+I G +TT+ L++ +Y + + HV +K
Sbjct: 238 LN-GKDPETGEPLDDENIRYQIITFLICGHETTSGLLSFALYFLVKNPHVLQK------- 289
Query: 343 FEADRAKEEKASLVQYDKEDLESFNQRVTQFAGLLNYDSMGKLYYLHAVITETLRLYPAV 402
A EE A ++ + +Y + +L Y+ V+ E LRL+P
Sbjct: 290 -----AAEEAARVL----------------VDPVPSYKQVKQLKYVGMVLNEALRLWPTA 328
Query: 403 PQDPKGILEDDVLPDGTKVKAGGMVTYVPYSMGRMEYNWGPDAASFKPERWLKDGVFQNA 462
P ED VL ++ G + + + R + WG D F+PER F+N
Sbjct: 329 PAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPER------FENP 382
Query: 463 SPF---KFTAFQAGPRICLGKDSAYLQMKMALAILCRFFKFK 501
S F F G R C+G+ A + + L ++ + F F+
Sbjct: 383 SAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|3HF2|A Chain A, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
pdb|3HF2|B Chain B, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 99/402 (24%), Positives = 166/402 (41%), Gaps = 77/402 (19%)
Query: 117 GDGIFN--VDGELWRKQRKTASFEFASKNLRDFSTKVFREYSLKLSSILTQASCH----- 169
GDG+F + W+K L FS + + Y + I Q
Sbjct: 84 GDGLFTSWTHEKNWKKAHNIL--------LPSFSQQAMKGYHAMMVDIAVQLVQKWERLN 135
Query: 170 -NQEIDMQELLMRMTLDSICKVGFGVEIGTLAPNLPD---NRFAQAFDTA-NIIVTLRFI 224
++ I++ E + R+TLD+I GF + + P +A D A N +
Sbjct: 136 ADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPD 195
Query: 225 DPLWKIKRFLHLGSEALLDKSIKVIDDFTYSVIKRRKAEIQEARETSDGTKIKYDILTRF 284
DP + ++ + IKV++D +I RKA + E SD D+LT
Sbjct: 196 DPAYD-------ENKRQFQEDIKVMNDLVDKIIADRKA----SGEQSD------DLLTHM 238
Query: 285 IELSEDPESN--LTDKSLRDVVLNFVIAGRDTTATTLTWGVYMAMTHNHVAEKLYSELKA 342
+ +DPE+ L D+++R ++ F+IAG +TT+ L++ +Y + + HV +K
Sbjct: 239 LN-GKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQK------- 290
Query: 343 FEADRAKEEKASLVQYDKEDLESFNQRVTQFAGLLNYDSMGKLYYLHAVITETLRLYPAV 402
A EE A ++ + +Y + +L Y+ V+ E LRL+P
Sbjct: 291 -----AAEEAARVL----------------VDPVPSYKQVKQLKYVGMVLNEALRLWPTA 329
Query: 403 PQDPKGILEDDVLPDGTKVKAGGMVTYVPYSMGRMEYNWGPDAASFKPERWLKDGVFQNA 462
P ED VL ++ G + + + R + WG D F+PER F+N
Sbjct: 330 PAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPER------FENP 383
Query: 463 SPFK---FTAFQAGPRICLGKDSAYLQMKMALAILCRFFKFK 501
S F F G R C G+ A + + L ++ + F F+
Sbjct: 384 SAIPQHAFKPFGNGQRACPGQQFALHEATLVLGMMLKHFDFE 425
>pdb|3EKF|A Chain A, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKF|B Chain B, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 98/402 (24%), Positives = 166/402 (41%), Gaps = 77/402 (19%)
Query: 117 GDGIFN--VDGELWRKQRKTASFEFASKNLRDFSTKVFREYSLKLSSILTQASCH----- 169
GDG+F + W+K L FS + + Y + I Q
Sbjct: 83 GDGLFTSWTHEKNWKKAHNIL--------LPSFSQQAMKGYHAMMVDIAVQLVQKWERLN 134
Query: 170 -NQEIDMQELLMRMTLDSICKVGFGVEIGTLAPNLPD---NRFAQAFDTA-NIIVTLRFI 224
++ I++ E + R+TLD+I GF + + P +A D A N +
Sbjct: 135 ADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPD 194
Query: 225 DPLWKIKRFLHLGSEALLDKSIKVIDDFTYSVIKRRKAEIQEARETSDGTKIKYDILTRF 284
DP + ++ + IKV++D +I RKA + E SD D+LT
Sbjct: 195 DPAYD-------ENKRQFQEDIKVMNDLVDKIIADRKA----SGEQSD------DLLTHM 237
Query: 285 IELSEDPESN--LTDKSLRDVVLNFVIAGRDTTATTLTWGVYMAMTHNHVAEKLYSELKA 342
+ +DPE+ L D+++R ++ F+I G +TT+ L++ +Y + + HV +K
Sbjct: 238 LN-GKDPETGEPLDDENIRYQIITFLIQGHETTSGLLSFALYFLVKNPHVLQK------- 289
Query: 343 FEADRAKEEKASLVQYDKEDLESFNQRVTQFAGLLNYDSMGKLYYLHAVITETLRLYPAV 402
A EE A ++ + +Y + +L Y+ V+ E LRL+P
Sbjct: 290 -----AAEEAARVL----------------VDPVPSYKQVKQLKYVGMVLNEALRLWPTA 328
Query: 403 PQDPKGILEDDVLPDGTKVKAGGMVTYVPYSMGRMEYNWGPDAASFKPERWLKDGVFQNA 462
P ED VL ++ G + + + R + WG D F+PER F+N
Sbjct: 329 PAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPER------FENP 382
Query: 463 SPF---KFTAFQAGPRICLGKDSAYLQMKMALAILCRFFKFK 501
S F F G R C+G+ A + + L ++ + F F+
Sbjct: 383 SAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|3KX4|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX4|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 99/402 (24%), Positives = 166/402 (41%), Gaps = 77/402 (19%)
Query: 117 GDGIFN--VDGELWRKQRKTASFEFASKNLRDFSTKVFREYSLKLSSILTQASCH----- 169
GDG+F + W+K L FS + + Y + I Q
Sbjct: 83 GDGLFTSWTHEKNWKKAHNIL--------LPSFSQQAMKGYHAMMVDIAVQLVQKWERLN 134
Query: 170 -NQEIDMQELLMRMTLDSICKVGFGVEIGTLAPNLPD---NRFAQAFDTA-NIIVTLRFI 224
++ I++ E + R+TLD+I GF + + P +A D A N +
Sbjct: 135 ADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPD 194
Query: 225 DPLWKIKRFLHLGSEALLDKSIKVIDDFTYSVIKRRKAEIQEARETSDGTKIKYDILTRF 284
DP + ++ + IKV++D +I RKA + E SD D+LT
Sbjct: 195 DPAYD-------ENKRQFQEDIKVMNDLVDKIIADRKA----SGEQSD------DLLTHM 237
Query: 285 IELSEDPESN--LTDKSLRDVVLNFVIAGRDTTATTLTWGVYMAMTHNHVAEKLYSELKA 342
+ +DPE+ L D+++R ++ F+IAG +TT+ L++ +Y + + HV +K
Sbjct: 238 LN-GKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQK------- 289
Query: 343 FEADRAKEEKASLVQYDKEDLESFNQRVTQFAGLLNYDSMGKLYYLHAVITETLRLYPAV 402
A EE A ++ + +Y + +L Y+ V+ E LRL+P
Sbjct: 290 -----AAEEAARVL----------------VDPVPSYKQVKQLKYVGMVLNEALRLWPTA 328
Query: 403 PQDPKGILEDDVLPDGTKVKAGGMVTYVPYSMGRMEYNWGPDAASFKPERWLKDGVFQNA 462
P ED VL ++ G + + + R + WG D F+PER F+N
Sbjct: 329 PAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPER------FENP 382
Query: 463 SPF---KFTAFQAGPRICLGKDSAYLQMKMALAILCRFFKFK 501
S F F G R C G+ A + + L ++ + F F+
Sbjct: 383 SAIPQHAFKPFGNGQRACEGQQFALHEATLVLGMMLKHFDFE 424
>pdb|2IJ3|A Chain A, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
pdb|2IJ3|B Chain B, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 98/402 (24%), Positives = 166/402 (41%), Gaps = 77/402 (19%)
Query: 117 GDGIFN--VDGELWRKQRKTASFEFASKNLRDFSTKVFREYSLKLSSILTQASCH----- 169
GDG+F + W+K L FS + + Y + I Q
Sbjct: 83 GDGLFTSWTHEKNWKKAHNIL--------LPSFSQQAMKGYHAMMVDIAVQLVQKWERLN 134
Query: 170 -NQEIDMQELLMRMTLDSICKVGFGVEIGTLAPNLPD---NRFAQAFDTA-NIIVTLRFI 224
++ I++ E + R+TLD+I GF + + P +A D A N +
Sbjct: 135 ADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPD 194
Query: 225 DPLWKIKRFLHLGSEALLDKSIKVIDDFTYSVIKRRKAEIQEARETSDGTKIKYDILTRF 284
DP + ++ + IKV++D +I RKA + E SD D+LT
Sbjct: 195 DPAYD-------ENKRQFQEDIKVMNDLVDKIIADRKA----SGEQSD------DLLTHM 237
Query: 285 IELSEDPESN--LTDKSLRDVVLNFVIAGRDTTATTLTWGVYMAMTHNHVAEKLYSELKA 342
+ +DPE+ L D+++R ++ F+I G +TT+ L++ +Y + + HV +K
Sbjct: 238 LN-GKDPETGEPLDDENIRYQIITFLIHGHETTSGLLSFALYFLVKNPHVLQK------- 289
Query: 343 FEADRAKEEKASLVQYDKEDLESFNQRVTQFAGLLNYDSMGKLYYLHAVITETLRLYPAV 402
A EE A ++ + +Y + +L Y+ V+ E LRL+P
Sbjct: 290 -----AAEEAARVL----------------VDPVPSYKQVKQLKYVGMVLNEALRLWPTA 328
Query: 403 PQDPKGILEDDVLPDGTKVKAGGMVTYVPYSMGRMEYNWGPDAASFKPERWLKDGVFQNA 462
P ED VL ++ G + + + R + WG D F+PER F+N
Sbjct: 329 PAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPER------FENP 382
Query: 463 SPF---KFTAFQAGPRICLGKDSAYLQMKMALAILCRFFKFK 501
S F F G R C+G+ A + + L ++ + F F+
Sbjct: 383 SAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|2IJ4|A Chain A, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
pdb|2IJ4|B Chain B, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 98/402 (24%), Positives = 166/402 (41%), Gaps = 77/402 (19%)
Query: 117 GDGIFN--VDGELWRKQRKTASFEFASKNLRDFSTKVFREYSLKLSSILTQASCH----- 169
GDG+F + W+K L FS + + Y + I Q
Sbjct: 83 GDGLFTSWTHEKNWKKAHNIL--------LPSFSQQAMKGYHAMMVDIAVQLVQKWERLN 134
Query: 170 -NQEIDMQELLMRMTLDSICKVGFGVEIGTLAPNLPD---NRFAQAFDTA-NIIVTLRFI 224
++ I++ E + R+TLD+I GF + + P +A D A N +
Sbjct: 135 ADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPD 194
Query: 225 DPLWKIKRFLHLGSEALLDKSIKVIDDFTYSVIKRRKAEIQEARETSDGTKIKYDILTRF 284
DP + ++ + IKV++D +I RKA + E SD D+LT
Sbjct: 195 DPAYD-------ENKRQFQEDIKVMNDLVDKIIADRKA----SGEQSD------DLLTHM 237
Query: 285 IELSEDPESN--LTDKSLRDVVLNFVIAGRDTTATTLTWGVYMAMTHNHVAEKLYSELKA 342
+ +DPE+ L D+++R ++ F+I G +TT+ L++ +Y + + HV +K
Sbjct: 238 LN-GKDPETGEPLDDENIRYQIITFLIKGHETTSGLLSFALYFLVKNPHVLQK------- 289
Query: 343 FEADRAKEEKASLVQYDKEDLESFNQRVTQFAGLLNYDSMGKLYYLHAVITETLRLYPAV 402
A EE A ++ + +Y + +L Y+ V+ E LRL+P
Sbjct: 290 -----AAEEAARVL----------------VDPVPSYKQVKQLKYVGMVLNEALRLWPTA 328
Query: 403 PQDPKGILEDDVLPDGTKVKAGGMVTYVPYSMGRMEYNWGPDAASFKPERWLKDGVFQNA 462
P ED VL ++ G + + + R + WG D F+PER F+N
Sbjct: 329 PAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPER------FENP 382
Query: 463 SPF---KFTAFQAGPRICLGKDSAYLQMKMALAILCRFFKFK 501
S F F G R C+G+ A + + L ++ + F F+
Sbjct: 383 SAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|1FAH|A Chain A, Structure Of Cytochrome P450
pdb|1FAH|B Chain B, Structure Of Cytochrome P450
Length = 471
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 98/402 (24%), Positives = 166/402 (41%), Gaps = 77/402 (19%)
Query: 117 GDGIFN--VDGELWRKQRKTASFEFASKNLRDFSTKVFREYSLKLSSILTQASCH----- 169
GDG+F + W+K L FS + + Y + I Q
Sbjct: 83 GDGLFTSWTHEKNWKKAHNIL--------LPSFSQQAMKGYHAMMVDIAVQLVQKWERLN 134
Query: 170 -NQEIDMQELLMRMTLDSICKVGFGVEIGTLAPNLPD---NRFAQAFDTA-NIIVTLRFI 224
++ I++ E + R+TLD+I GF + + P +A D A N +
Sbjct: 135 ADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPD 194
Query: 225 DPLWKIKRFLHLGSEALLDKSIKVIDDFTYSVIKRRKAEIQEARETSDGTKIKYDILTRF 284
DP + ++ + IKV++D +I RKA + E SD D+LT
Sbjct: 195 DPAYD-------ENKRQFQEDIKVMNDLVDKIIADRKA----SGEQSD------DLLTHM 237
Query: 285 IELSEDPESN--LTDKSLRDVVLNFVIAGRDTTATTLTWGVYMAMTHNHVAEKLYSELKA 342
+ +DPE+ L D+++R ++ F+IAG + T+ L++ +Y + + HV +K
Sbjct: 238 LN-GKDPETGEPLDDENIRYQIITFLIAGHEATSGLLSFALYFLVKNPHVLQK------- 289
Query: 343 FEADRAKEEKASLVQYDKEDLESFNQRVTQFAGLLNYDSMGKLYYLHAVITETLRLYPAV 402
A EE A ++ + +Y + +L Y+ V+ E LRL+P
Sbjct: 290 -----AAEEAARVL----------------VDPVPSYKQVKQLKYVGMVLNEALRLWPTA 328
Query: 403 PQDPKGILEDDVLPDGTKVKAGGMVTYVPYSMGRMEYNWGPDAASFKPERWLKDGVFQNA 462
P ED VL ++ G + + + R + WG D F+PER F+N
Sbjct: 329 PAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPER------FENP 382
Query: 463 SPF---KFTAFQAGPRICLGKDSAYLQMKMALAILCRFFKFK 501
S F F G R C+G+ A + + L ++ + F F+
Sbjct: 383 SAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|3QI8|B Chain B, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
pdb|3QI8|A Chain A, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
Length = 472
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/341 (25%), Positives = 149/341 (43%), Gaps = 61/341 (17%)
Query: 170 NQEIDMQELLMRMTLDSICKVGFGVEIGTLAPNLPD---NRFAQAFDTA-NIIVTLRFID 225
++ I++ E + R+TLD+I GF I + + P +A D N + D
Sbjct: 137 DEHIEVPEDMTRLTLDTIGLCGFNYRINSFYRDQPHPFITSMVRALDEVMNKLQRANPDD 196
Query: 226 PLWKIKRFLHLGSEALLDKSIKVIDDFTYSVIKRRKAEIQEARETSDGTKIKYDILTRFI 285
P + ++ + IKV++D +I RKA + E SD D+LT +
Sbjct: 197 PAYD-------ENKRQFQEDIKVMNDLVDKIIADRKA----SGEQSD------DLLTHML 239
Query: 286 ELSEDPESN--LTDKSLRDVVLNFVIAGRDTTATTLTWGVYMAMTHNHVAEKLYSELKAF 343
+DPE+ L D+++R ++ F+IAG +TT+ LT+ +Y + + HV +K
Sbjct: 240 H-GKDPETGEPLDDENIRYQIITFLIAGHETTSGLLTFALYFLVKNPHVLQK-------- 290
Query: 344 EADRAKEEKASLVQYDKEDLESFNQRVTQFAGLLNYDSMGKLYYLHAVITETLRLYPAVP 403
A EE A ++ + +Y + +L Y+ V+ E LR++P P
Sbjct: 291 ----AAEEAARVL----------------VDPVPSYKQVKQLKYVGMVLNEALRIWPTAP 330
Query: 404 QDPKGILEDDVLPDGTKVKAGGMVTYVPYSMGRMEYNWGPDAASFKPERWLKDGVFQNAS 463
ED +L ++ G + + + R + WG D F+PER F+N S
Sbjct: 331 AFSLYAKEDTMLGGEYPLEKGDELMVLIPQLHRDKTVWGDDVEEFRPER------FENPS 384
Query: 464 PF---KFTAFQAGPRICLGKDSAYLQMKMALAILCRFFKFK 501
F F G R C+G+ A + + L ++ + F F+
Sbjct: 385 AIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 425
>pdb|1SMI|A Chain A, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMI|B Chain B, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMJ|A Chain A, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|B Chain B, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|C Chain C, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|D Chain D, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
Length = 471
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 98/402 (24%), Positives = 166/402 (41%), Gaps = 77/402 (19%)
Query: 117 GDGIFN--VDGELWRKQRKTASFEFASKNLRDFSTKVFREYSLKLSSILTQASCH----- 169
GDG+F + W+K L FS + + Y + I Q
Sbjct: 83 GDGLFTSWTHEKNWKKAHNIL--------LPSFSQQAMKGYHAMMVDIAVQLVQKWERLN 134
Query: 170 -NQEIDMQELLMRMTLDSICKVGFGVEIGTLAPNLPD---NRFAQAFDTA-NIIVTLRFI 224
++ I++ E + R+TLD+I GF + + P +A D A N +
Sbjct: 135 ADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPD 194
Query: 225 DPLWKIKRFLHLGSEALLDKSIKVIDDFTYSVIKRRKAEIQEARETSDGTKIKYDILTRF 284
DP + ++ + IKV++D +I RKA + E SD D+LT
Sbjct: 195 DPAYD-------ENKRQFQEDIKVMNDLVDKIIADRKA----SGEQSD------DLLTHM 237
Query: 285 IELSEDPESN--LTDKSLRDVVLNFVIAGRDTTATTLTWGVYMAMTHNHVAEKLYSELKA 342
+ +DPE+ L D+++R ++ F+I G +TT+ L++ +Y + + HV +K
Sbjct: 238 LN-GKDPETGEPLDDENIRYQIITFLIEGHETTSGLLSFALYFLVKNPHVLQK------- 289
Query: 343 FEADRAKEEKASLVQYDKEDLESFNQRVTQFAGLLNYDSMGKLYYLHAVITETLRLYPAV 402
A EE A ++ + +Y + +L Y+ V+ E LRL+P
Sbjct: 290 -----AAEEAARVL----------------VDPVPSYKQVKQLKYVGMVLNEALRLWPTA 328
Query: 403 PQDPKGILEDDVLPDGTKVKAGGMVTYVPYSMGRMEYNWGPDAASFKPERWLKDGVFQNA 462
P ED VL ++ G + + + R + WG D F+PER F+N
Sbjct: 329 PAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPER------FENP 382
Query: 463 SPF---KFTAFQAGPRICLGKDSAYLQMKMALAILCRFFKFK 501
S F F G R C+G+ A + + L ++ + F F+
Sbjct: 383 SAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|4DUD|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUD|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUE|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
pdb|4DUE|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
Length = 471
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 92/373 (24%), Positives = 158/373 (42%), Gaps = 67/373 (17%)
Query: 144 LRDFSTKVFREYSLKLSSILTQASCH------NQEIDMQELLMRMTLDSICKVGFGVEIG 197
L FS + + Y + I Q ++ I++ E + R+TLD+I GF
Sbjct: 104 LPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFN 163
Query: 198 TLAPNLPD---NRFAQAFDTA-NIIVTLRFIDPLWKIKRFLHLGSEALLDKSIKVIDDFT 253
+ + P +A D A N + DP + ++ + IKV++D
Sbjct: 164 SFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYD-------ENKRQFQEDIKVMNDLV 216
Query: 254 YSVIKRRKAEIQEARETSDGTKIKYDILTRFIELSEDPESN--LTDKSLRDVVLNFVIAG 311
+I RKA + E SD D+LT + +DPE+ L D+++R ++ F+IAG
Sbjct: 217 DKIIADRKA----SGEQSD------DLLTHMLN-GKDPETGEPLDDENIRYQIITFLIAG 265
Query: 312 RDTTATTLTWGVYMAMTHNHVAEKLYSELKAFEADRAKEEKASLVQYDKEDLESFNQRVT 371
++T+ L++ +Y + + HV +K A EE A ++
Sbjct: 266 HESTSGLLSFALYFLVKNPHVLQK------------AAEEAARVL--------------- 298
Query: 372 QFAGLLNYDSMGKLYYLHAVITETLRLYPAVPQDPKGILEDDVLPDGTKVKAGGMVTYVP 431
+ +Y + +L Y+ V+ E LRL+P P ED VL ++ G + +
Sbjct: 299 -VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLI 357
Query: 432 YSMGRMEYNWGPDAASFKPERWLKDGVFQNASPF---KFTAFQAGPRICLGKDSAYLQMK 488
+ R + WG D F+PER F+N S F F G R C+G+ A +
Sbjct: 358 PQLHRDKTIWGDDVEEFRPER------FENPSAIPQHAFKPFGNGQRACIGQQFALHEAT 411
Query: 489 MALAILCRFFKFK 501
+ L ++ + F F+
Sbjct: 412 LVLGMMLKHFDFE 424
>pdb|3EKD|A Chain A, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKD|B Chain B, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 98/402 (24%), Positives = 166/402 (41%), Gaps = 77/402 (19%)
Query: 117 GDGIFN--VDGELWRKQRKTASFEFASKNLRDFSTKVFREYSLKLSSILTQASCH----- 169
GDG+F + W+K L FS + + Y + I Q
Sbjct: 83 GDGLFTSWTHEKNWKKAHNIL--------LPSFSQQAMKGYHAMMVDIAVQLVQKWERLN 134
Query: 170 -NQEIDMQELLMRMTLDSICKVGFGVEIGTLAPNLPD---NRFAQAFDTA-NIIVTLRFI 224
++ I++ E + R+TLD+I GF + + P +A D A N +
Sbjct: 135 ADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPD 194
Query: 225 DPLWKIKRFLHLGSEALLDKSIKVIDDFTYSVIKRRKAEIQEARETSDGTKIKYDILTRF 284
DP + ++ + IKV++D +I RKA + E SD D+LT
Sbjct: 195 DPAYD-------ENKRQFQEDIKVMNDLVDKIIADRKA----SGEQSD------DLLTHM 237
Query: 285 IELSEDPESN--LTDKSLRDVVLNFVIAGRDTTATTLTWGVYMAMTHNHVAEKLYSELKA 342
+ +DPE+ L D+++R ++ F+I G +TT+ L++ +Y + + HV +K
Sbjct: 238 LN-GKDPETGEPLDDENIRYQIITFLIMGHETTSGLLSFALYFLVKNPHVLQK------- 289
Query: 343 FEADRAKEEKASLVQYDKEDLESFNQRVTQFAGLLNYDSMGKLYYLHAVITETLRLYPAV 402
A EE A ++ + +Y + +L Y+ V+ E LRL+P
Sbjct: 290 -----AAEEAARVL----------------VDPVPSYKQVKQLKYVGMVLNEALRLWPTA 328
Query: 403 PQDPKGILEDDVLPDGTKVKAGGMVTYVPYSMGRMEYNWGPDAASFKPERWLKDGVFQNA 462
P ED VL ++ G + + + R + WG D F+PER F+N
Sbjct: 329 PAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPER------FENP 382
Query: 463 SPF---KFTAFQAGPRICLGKDSAYLQMKMALAILCRFFKFK 501
S F F G R C+G+ A + + L ++ + F F+
Sbjct: 383 SAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|4DUF|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|C Chain C, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|D Chain D, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
Length = 471
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 92/373 (24%), Positives = 158/373 (42%), Gaps = 67/373 (17%)
Query: 144 LRDFSTKVFREYSLKLSSILTQASCH------NQEIDMQELLMRMTLDSICKVGFGVEIG 197
L FS + + Y + I Q ++ I++ E + R+TLD+I GF
Sbjct: 104 LPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFN 163
Query: 198 TLAPNLPD---NRFAQAFDTA-NIIVTLRFIDPLWKIKRFLHLGSEALLDKSIKVIDDFT 253
+ + P +A D A N + DP + ++ + IKV++D
Sbjct: 164 SFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYD-------ENKRQFQEDIKVMNDLV 216
Query: 254 YSVIKRRKAEIQEARETSDGTKIKYDILTRFIELSEDPESN--LTDKSLRDVVLNFVIAG 311
+I RKA + E SD D+LT + +DPE+ L D+++R ++ F+IAG
Sbjct: 217 DKIIADRKA----SGEQSD------DLLTHMLN-GKDPETGEPLDDENIRYQIITFLIAG 265
Query: 312 RDTTATTLTWGVYMAMTHNHVAEKLYSELKAFEADRAKEEKASLVQYDKEDLESFNQRVT 371
++T+ L++ +Y + + HV +K A EE A ++
Sbjct: 266 HESTSGLLSFALYFLVKNPHVLQK------------AAEEAARVL--------------- 298
Query: 372 QFAGLLNYDSMGKLYYLHAVITETLRLYPAVPQDPKGILEDDVLPDGTKVKAGGMVTYVP 431
+ +Y + +L Y+ V+ E LRL+P P ED VL ++ G + +
Sbjct: 299 -VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLI 357
Query: 432 YSMGRMEYNWGPDAASFKPERWLKDGVFQNASPF---KFTAFQAGPRICLGKDSAYLQMK 488
+ R + WG D F+PER F+N S F F G R C+G+ A +
Sbjct: 358 PQLHRDKTIWGDDVEEFRPER------FENPSAIPQHAFKPFGNGQRACIGQQFALHEAT 411
Query: 489 MALAILCRFFKFK 501
+ L ++ + F F+
Sbjct: 412 LVLGMMLKHFDFE 424
>pdb|4DUC|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
pdb|4DUC|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
Length = 472
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 92/373 (24%), Positives = 158/373 (42%), Gaps = 67/373 (17%)
Query: 144 LRDFSTKVFREYSLKLSSILTQASCH------NQEIDMQELLMRMTLDSICKVGFGVEIG 197
L FS + + Y + I Q ++ I++ E + R+TLD+I GF
Sbjct: 105 LPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFN 164
Query: 198 TLAPNLPD---NRFAQAFDTA-NIIVTLRFIDPLWKIKRFLHLGSEALLDKSIKVIDDFT 253
+ + P +A D A N + DP + ++ + IKV++D
Sbjct: 165 SFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYD-------ENKRQFQEDIKVMNDLV 217
Query: 254 YSVIKRRKAEIQEARETSDGTKIKYDILTRFIELSEDPESN--LTDKSLRDVVLNFVIAG 311
+I RKA + E SD D+LT + +DPE+ L D+++R ++ F+IAG
Sbjct: 218 DKIIADRKA----SGEQSD------DLLTHMLN-GKDPETGEPLDDENIRYQIITFLIAG 266
Query: 312 RDTTATTLTWGVYMAMTHNHVAEKLYSELKAFEADRAKEEKASLVQYDKEDLESFNQRVT 371
++T+ L++ +Y + + HV +K A EE A ++
Sbjct: 267 HESTSGLLSFALYFLVKNPHVLQK------------AAEEAARVL--------------- 299
Query: 372 QFAGLLNYDSMGKLYYLHAVITETLRLYPAVPQDPKGILEDDVLPDGTKVKAGGMVTYVP 431
+ +Y + +L Y+ V+ E LRL+P P ED VL ++ G + +
Sbjct: 300 -VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLI 358
Query: 432 YSMGRMEYNWGPDAASFKPERWLKDGVFQNASPF---KFTAFQAGPRICLGKDSAYLQMK 488
+ R + WG D F+PER F+N S F F G R C+G+ A +
Sbjct: 359 PQLHRDKTIWGDDVEEFRPER------FENPSAIPQHAFKPFGNGQRACIGQQFALHEAT 412
Query: 489 MALAILCRFFKFK 501
+ L ++ + F F+
Sbjct: 413 LVLGMMLKHFDFE 425
>pdb|3DGI|A Chain A, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
pdb|3DGI|B Chain B, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
Length = 461
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 92/373 (24%), Positives = 157/373 (42%), Gaps = 67/373 (17%)
Query: 144 LRDFSTKVFREYSLKLSSILTQASCH------NQEIDMQELLMRMTLDSICKVGFGVEIG 197
L FS + + Y + I Q ++ I++ E + R+TLD+I GF
Sbjct: 104 LPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFN 163
Query: 198 TLAPNLPD---NRFAQAFDTA-NIIVTLRFIDPLWKIKRFLHLGSEALLDKSIKVIDDFT 253
+ + P +A D A N + DP + ++ + IKV++D
Sbjct: 164 SFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYD-------ENKRQFQEDIKVMNDLV 216
Query: 254 YSVIKRRKAEIQEARETSDGTKIKYDILTRFIELSEDPESN--LTDKSLRDVVLNFVIAG 311
+I RKA + E SD D+LT + +DPE+ L D+++R ++ F+IAG
Sbjct: 217 DKIIADRKA----SGEQSD------DLLTHMLN-GKDPETGEPLDDENIRYQIITFLIAG 265
Query: 312 RDTTATTLTWGVYMAMTHNHVAEKLYSELKAFEADRAKEEKASLVQYDKEDLESFNQRVT 371
+ T+ L++ +Y + + HV +K A EE A ++
Sbjct: 266 HEATSGLLSFALYFLVKNPHVLQK------------AAEEAARVL--------------- 298
Query: 372 QFAGLLNYDSMGKLYYLHAVITETLRLYPAVPQDPKGILEDDVLPDGTKVKAGGMVTYVP 431
+ +Y + +L Y+ V+ E LRL+P P ED VL ++ G + +
Sbjct: 299 -VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLI 357
Query: 432 YSMGRMEYNWGPDAASFKPERWLKDGVFQNASPF---KFTAFQAGPRICLGKDSAYLQMK 488
+ R + WG D F+PER F+N S F F G R C+G+ A +
Sbjct: 358 PQLHRDKTIWGDDVEEFRPER------FENPSAIPQHAFKPFGNGQRACIGQQFALHEAT 411
Query: 489 MALAILCRFFKFK 501
+ L ++ + F F+
Sbjct: 412 LVLGMMLKHFDFE 424
>pdb|3CBD|A Chain A, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
pdb|3CBD|B Chain B, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
Length = 455
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 102/409 (24%), Positives = 173/409 (42%), Gaps = 84/409 (20%)
Query: 117 GDGIFN--VDGELWRKQRKTASFEFASKNLRDFSTKVFREYSLKLSSILTQASCH----- 169
GDG+F + W+K L FS + + Y + I Q
Sbjct: 83 GDGLFTSWTHEKNWKKAHNIL--------LPSFSQQAMKGYHAMMVDIAVQLVQKWERLN 134
Query: 170 -NQEIDMQELLMRMTLDSICKVGFGVEIGTLAPNLPDNRFAQAFDTANIIVTLRFIDPLW 228
++ I++ E + R+TLD+I GF + + P F II +R +D +
Sbjct: 135 ADEYIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQP-----HPF----IISMIRALDEVM 185
Query: 229 -KIKRF-----LHLGSEALLDKSIKVIDDFTYSVIKRRKAEIQEARETSDGTKIKYDILT 282
K++R + ++ + IKV++D +I RKA + E SD D+LT
Sbjct: 186 NKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKA----SGEQSD------DLLT 235
Query: 283 RFIELSEDPESN--LTDKSLRDVVLNFVIAGRDTTATTLTWGVYMAMTHNHVAEKLYSEL 340
+ + +DPE+ L D ++ ++ F+IAG +TT+ L++ +Y + + HV +K+
Sbjct: 236 QMLN-GKDPETGEPLDDGNISYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKV---- 290
Query: 341 KAFEADRAKEEKASLVQYDKEDLESFNQRVTQFAGLLNYDSMGKLYYLHAVITETLRLYP 400
E+A+ V D + +Y + +L Y+ V+ E LRL+P
Sbjct: 291 ---------AEEATRVLVDP---------------VPSYKQVKQLKYVGMVLNEALRLWP 326
Query: 401 AVPQDPKGILEDDVLPDGTKVKAGGMVTYVPYSMGRMEYNWGPDAASFKPERWLKDGVFQ 460
P ED VL ++ G V + + R + WG D F+PER F+
Sbjct: 327 TAPAFSLYAKEDTVLGGEYPLEKGDEVMVLIPQLHRDKTIWGDDVEEFRPER------FE 380
Query: 461 NASPF---KFTAFQAGPRICLGKDSAYLQMKMALAILCRFFKFKLVPDH 506
N S F F G R C+G+ A + + L ++ + F F+ DH
Sbjct: 381 NPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE---DH 426
>pdb|3KX5|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX5|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 98/402 (24%), Positives = 166/402 (41%), Gaps = 77/402 (19%)
Query: 117 GDGIFN--VDGELWRKQRKTASFEFASKNLRDFSTKVFREYSLKLSSILTQASCH----- 169
GDG+F + W+K L FS + + Y + I Q
Sbjct: 83 GDGLFTSWTHEKNWKKAHNIL--------LPSFSQQAMKGYHAMMVDIAVQLVQKWERLN 134
Query: 170 -NQEIDMQELLMRMTLDSICKVGFGVEIGTLAPNLPD---NRFAQAFDTA-NIIVTLRFI 224
++ I++ E + R+TLD+I GF + + P +A D A N +
Sbjct: 135 ADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPD 194
Query: 225 DPLWKIKRFLHLGSEALLDKSIKVIDDFTYSVIKRRKAEIQEARETSDGTKIKYDILTRF 284
DP + ++ + IKV++D +I RKA + E SD D+LT
Sbjct: 195 DPAYD-------ENKRQFQEDIKVMNDLVDKIIADRKA----SGEQSD------DLLTHM 237
Query: 285 IELSEDPESN--LTDKSLRDVVLNFVIAGRDTTATTLTWGVYMAMTHNHVAEKLYSELKA 342
+ +DPE+ L D+++R ++ +IAG +TT+ L++ +Y + + HV +K
Sbjct: 238 LN-GKDPETGEPLDDENIRYQIITELIAGHETTSGLLSFALYFLVKNPHVLQK------- 289
Query: 343 FEADRAKEEKASLVQYDKEDLESFNQRVTQFAGLLNYDSMGKLYYLHAVITETLRLYPAV 402
A EE A ++ + +Y + +L Y+ V+ E LRL+P
Sbjct: 290 -----AAEEAARVL----------------VDPVPSYKQVKQLKYVGMVLNEALRLWPTA 328
Query: 403 PQDPKGILEDDVLPDGTKVKAGGMVTYVPYSMGRMEYNWGPDAASFKPERWLKDGVFQNA 462
P ED VL ++ G + + + R + WG D F+PER F+N
Sbjct: 329 PAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPER------FENP 382
Query: 463 SPF---KFTAFQAGPRICLGKDSAYLQMKMALAILCRFFKFK 501
S F F G R C+G+ A + + L ++ + F F+
Sbjct: 383 SAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|4DUA|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
pdb|4DUA|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
Length = 471
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 97/402 (24%), Positives = 165/402 (41%), Gaps = 77/402 (19%)
Query: 117 GDGIFN--VDGELWRKQRKTASFEFASKNLRDFSTKVFREYSLKLSSILTQASCH----- 169
GDG+F + W+K L FS + + Y + I Q
Sbjct: 83 GDGLFTSWTHEKNWKKAHNIL--------LPSFSQQAMKGYHAMMVDIAVQLVQKWERLN 134
Query: 170 -NQEIDMQELLMRMTLDSICKVGFGVEIGTLAPNLPD---NRFAQAFDTA-NIIVTLRFI 224
++ I++ E + R+TLD+I GF + + P +A D A N +
Sbjct: 135 ADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPD 194
Query: 225 DPLWKIKRFLHLGSEALLDKSIKVIDDFTYSVIKRRKAEIQEARETSDGTKIKYDILTRF 284
DP + ++ + IKV++D +I RKA + E SD D+LT
Sbjct: 195 DPAYD-------ENKRQFQEDIKVMNDLVDKIIADRKA----SGEQSD------DLLTHM 237
Query: 285 IELSEDPESN--LTDKSLRDVVLNFVIAGRDTTATTLTWGVYMAMTHNHVAEKLYSELKA 342
+ +DPE+ L D+++R ++ F+ AG + T+ L++ +Y + + HV +K
Sbjct: 238 LN-GKDPETGEPLDDENIRYQIITFLAAGHEATSGLLSFALYFLVKNPHVLQK------- 289
Query: 343 FEADRAKEEKASLVQYDKEDLESFNQRVTQFAGLLNYDSMGKLYYLHAVITETLRLYPAV 402
A EE A ++ + +Y + +L Y+ V+ E LRL+P
Sbjct: 290 -----AAEEAARVL----------------VDPVPSYKQVKQLKYVGMVLNEALRLWPTG 328
Query: 403 PQDPKGILEDDVLPDGTKVKAGGMVTYVPYSMGRMEYNWGPDAASFKPERWLKDGVFQNA 462
P ED VL ++ G + + + R + WG D F+PER F+N
Sbjct: 329 PAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPER------FENP 382
Query: 463 SPF---KFTAFQAGPRICLGKDSAYLQMKMALAILCRFFKFK 501
S F F G R C+G+ A + + L ++ + F F+
Sbjct: 383 SAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|4DUB|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
pdb|4DUB|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
Length = 472
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 97/402 (24%), Positives = 165/402 (41%), Gaps = 77/402 (19%)
Query: 117 GDGIFN--VDGELWRKQRKTASFEFASKNLRDFSTKVFREYSLKLSSILTQASCH----- 169
GDG+F + W+K L FS + + Y + I Q
Sbjct: 84 GDGLFTSWTHEKNWKKAHNIL--------LPSFSQQAMKGYHAMMVDIAVQLVQKWERLN 135
Query: 170 -NQEIDMQELLMRMTLDSICKVGFGVEIGTLAPNLPD---NRFAQAFDTA-NIIVTLRFI 224
++ I++ E + R+TLD+I GF + + P +A D A N +
Sbjct: 136 ADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPD 195
Query: 225 DPLWKIKRFLHLGSEALLDKSIKVIDDFTYSVIKRRKAEIQEARETSDGTKIKYDILTRF 284
DP + ++ + IKV++D +I RKA + E SD D+LT
Sbjct: 196 DPAYD-------ENKRQFQEDIKVMNDLVDKIIADRKA----SGEQSD------DLLTHM 238
Query: 285 IELSEDPESN--LTDKSLRDVVLNFVIAGRDTTATTLTWGVYMAMTHNHVAEKLYSELKA 342
+ +DPE+ L D+++R ++ F+ AG + T+ L++ +Y + + HV +K
Sbjct: 239 LN-GKDPETGEPLDDENIRYQIITFLAAGHEATSGLLSFALYFLVKNPHVLQK------- 290
Query: 343 FEADRAKEEKASLVQYDKEDLESFNQRVTQFAGLLNYDSMGKLYYLHAVITETLRLYPAV 402
A EE A ++ + +Y + +L Y+ V+ E LRL+P
Sbjct: 291 -----AAEEAARVL----------------VDPVPSYKQVKQLKYVGMVLNEALRLWPTG 329
Query: 403 PQDPKGILEDDVLPDGTKVKAGGMVTYVPYSMGRMEYNWGPDAASFKPERWLKDGVFQNA 462
P ED VL ++ G + + + R + WG D F+PER F+N
Sbjct: 330 PAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPER------FENP 383
Query: 463 SPF---KFTAFQAGPRICLGKDSAYLQMKMALAILCRFFKFK 501
S F F G R C+G+ A + + L ++ + F F+
Sbjct: 384 SAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 425
>pdb|4DTW|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTW|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTY|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTY|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTZ|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
pdb|4DTZ|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
Length = 469
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 110/472 (23%), Positives = 186/472 (39%), Gaps = 89/472 (18%)
Query: 53 LMNYDRMHDWLVNYLSELKTVV---VPMPFTTY---TYIADPANVEHVLKTNFANYPKGE 106
L+N D+ L+ EL + P T Y + A E N + PK
Sbjct: 19 LLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDESRFDKNLSQAPK-- 76
Query: 107 TYHSYMEVLLGDGIFN--VDGELWRKQRKTASFEFASKNLRDFSTKVFREYSLKLSSILT 164
++ GDG+F + W+K L FS + + Y + I
Sbjct: 77 ----FVRDFAGDGLFTSWTHEKNWKKAHNIL--------LPSFSQQAMKGYHAMMVDIAV 124
Query: 165 QASCH------NQEIDMQELLMRMTLDSICKVGFGVEIGTLAPNLPD---NRFAQAFDTA 215
Q ++ I++ E + R+TLD+I GF + + P +A D A
Sbjct: 125 QLVQKWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEA 184
Query: 216 -NIIVTLRFIDPLWKIKRFLHLGSEALLDKSIKVIDDFTYSVIKRRKAEIQEARETSDGT 274
N + DP + ++ + IKV++D +I RKA + E SD
Sbjct: 185 MNKLRRANPDDPAYD-------ENKRQFQEDIKVMNDLVDKIIADRKA----SGEQSD-- 231
Query: 275 KIKYDILTRFIELSEDPESN--LTDKSLRDVVLNFVIAGRDTTATTLTWGVYMAMTHNHV 332
D+LT + +DPE+ L D+++R ++ F+ AG + T+ L++ +Y + + H
Sbjct: 232 ----DLLTHMLN-GKDPETGEPLDDENIRYQIITFLAAGHEATSGLLSFALYFLVKNPH- 285
Query: 333 AEKLYSELKAFEADRAKEEKASLVQYDKEDLESFNQRVTQFAGLLNYDSMGKLYYLHAVI 392
E +A EE A ++ + +Y + +L Y+ V+
Sbjct: 286 -----------ELQKAAEEAARVL----------------VDPVPSYKQVKQLKYVGMVL 318
Query: 393 TETLRLYPAVPQDPKGILEDDVLPDGTKVKAGGMVTYVPYSMGRMEYNWGPDAASFKPER 452
E LRL+P P ED VL ++ G + + + R + WG D F+PER
Sbjct: 319 NEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPER 378
Query: 453 WLKDGVFQNASPFK---FTAFQAGPRICLGKDSAYLQMKMALAILCRFFKFK 501
F+N S F F G R C+G+ A + + L ++ + F F+
Sbjct: 379 ------FENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|4DU2|B Chain B, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
pdb|4DU2|A Chain A, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
Length = 470
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 110/472 (23%), Positives = 187/472 (39%), Gaps = 89/472 (18%)
Query: 53 LMNYDRMHDWLVNYLSELKTVV---VPMPFTTY---TYIADPANVEHVLKTNFANYPKGE 106
L+N D+ L+ EL + P T Y + A E N + PK
Sbjct: 20 LLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDESRFDKNLSQAPK-- 77
Query: 107 TYHSYMEVLLGDGIFN--VDGELWRKQRKTASFEFASKNLRDFSTKVFREYSLKLSSILT 164
++ L GDG+F + W+K L FS + + Y + I
Sbjct: 78 ----FVRDLAGDGLFTSWTHEKNWKKAHNIL--------LPSFSQQAMKGYHAMMVDIAV 125
Query: 165 QASCH------NQEIDMQELLMRMTLDSICKVGFGVEIGTLAPNLPD---NRFAQAFDTA 215
Q ++ I++ E + R+TLD+I GF + + P +A D A
Sbjct: 126 QLVQKWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEA 185
Query: 216 -NIIVTLRFIDPLWKIKRFLHLGSEALLDKSIKVIDDFTYSVIKRRKAEIQEARETSDGT 274
N + DP + ++ + IKV++D +I RKA + E SD
Sbjct: 186 MNKLRRANPDDPAYD-------ENKRQFQEDIKVMNDLVDKIIADRKA----SGEQSD-- 232
Query: 275 KIKYDILTRFIELSEDPESN--LTDKSLRDVVLNFVIAGRDTTATTLTWGVYMAMTHNHV 332
D+LT + +DPE+ L D+++R ++ F+ AG + T+ L++ +Y + + H
Sbjct: 233 ----DLLTHMLN-GKDPETGEPLDDENIRYQIITFLAAGHEATSGLLSFALYFLVKNPH- 286
Query: 333 AEKLYSELKAFEADRAKEEKASLVQYDKEDLESFNQRVTQFAGLLNYDSMGKLYYLHAVI 392
E +A EE A ++ + ++ + +L Y+ V+
Sbjct: 287 -----------ELQKAAEEAARVL----------------VDPVPSHKQVKQLKYVGMVL 319
Query: 393 TETLRLYPAVPQDPKGILEDDVLPDGTKVKAGGMVTYVPYSMGRMEYNWGPDAASFKPER 452
E LRL+P P ED VL ++ G + + + R + WG D F+PER
Sbjct: 320 NEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTVWGDDVEEFRPER 379
Query: 453 WLKDGVFQNASPFK---FTAFQAGPRICLGKDSAYLQMKMALAILCRFFKFK 501
F+N S F F G R C+G+ A + + L ++ + F F+
Sbjct: 380 ------FENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 425
>pdb|3NA0|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
pdb|3NA0|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
Length = 471
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 109/442 (24%), Positives = 178/442 (40%), Gaps = 75/442 (16%)
Query: 83 TYIADPANVEHVLKTNFAN-----YPKGETYHSYMEVLLGDGIFNVDGELWRKQRKTASF 137
Y+ DP +V + K+ N P YH Y + +G + W+K R +
Sbjct: 56 VYVIDPEDVALLFKSEGPNPERFLIPPWVAYHQYYQRPIG--VLLKKSAAWKKDRVALNQ 113
Query: 138 EF----ASKNLRDFSTKVFREYSLKLSSILTQASCHNQEIDMQELLMRMTLDSICKVGFG 193
E A+KN V R++ L + +A N D+ + L R +SI V FG
Sbjct: 114 EVMAPEATKNFLPLLDAVSRDFVSVLHRRIKKAGSGNYSGDISDDLFRFAFESITNVIFG 173
Query: 194 VEIGTLAP--NLPDNRFA----QAFDTANIIVTLR------FIDPLWKIKRFLHLGS-EA 240
G L N RF Q F T+ ++ L F WK H+ + +
Sbjct: 174 ERQGMLEEVVNPEAQRFIDAIYQMFHTSVPMLNLPPDLFRLFRTKTWKD----HVAAWDV 229
Query: 241 LLDKSIKVIDDFTYSVIKRRKAEIQEARETSDGTKIKYDILTRFIELSEDPESNLTDKSL 300
+ K+ +F + + R+K + D I Y +L ED ++N+T+
Sbjct: 230 IFSKADIYTQNFYWEL--RQKGSVHH-----DYRGILYRLLGDSKMSFEDIKANVTE--- 279
Query: 301 RDVVLNFVIAGRDTTATTLTWGVYMAMTHNHVAEKLYSELKAFEADRAKEEKASLVQYDK 360
+ G DTT+ TL W +Y + V + L +E+ A +A+ + A+++Q
Sbjct: 280 ------MLAGGVDTTSMTLQWHLYEMARNLKVQDMLRAEVLA-ARHQAQGDMATMLQL-- 330
Query: 361 EDLESFNQRVTQFAGLLNYDSMGKLYYLHAVITETLRLYPAVPQDPKGILEDDVLPDGTK 420
+ L A I ETLRL+P + ++ D VL D
Sbjct: 331 ------------------------VPLLKASIKETLRLHPISVTLQRYLVNDLVLRD-YM 365
Query: 421 VKAGGMVTYVPYSMGRMEYNWGPDAASFKPERWLKDGVFQNASPFKFTAFQAGPRICLGK 480
+ A +V Y++GR E + D +F P RWL +N + F+ F G R CLG+
Sbjct: 366 IPAKTLVQVAIYALGR-EPTFFFDPENFDPTRWLSKD--KNITYFRNLGFGWGVRQCLGR 422
Query: 481 DSAYLQMKMALAILCRFFKFKL 502
A L+M + L + F+ ++
Sbjct: 423 RIAELEMTIFLINMLENFRVEI 444
>pdb|3N9Y|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Y|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Z|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3N9Z|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3NA1|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
pdb|3NA1|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
Length = 487
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 109/442 (24%), Positives = 178/442 (40%), Gaps = 75/442 (16%)
Query: 83 TYIADPANVEHVLKTNFAN-----YPKGETYHSYMEVLLGDGIFNVDGELWRKQRKTASF 137
Y+ DP +V + K+ N P YH Y + +G + W+K R +
Sbjct: 59 VYVIDPEDVALLFKSEGPNPERFLIPPWVAYHQYYQRPIG--VLLKKSAAWKKDRVALNQ 116
Query: 138 EF----ASKNLRDFSTKVFREYSLKLSSILTQASCHNQEIDMQELLMRMTLDSICKVGFG 193
E A+KN V R++ L + +A N D+ + L R +SI V FG
Sbjct: 117 EVMAPEATKNFLPLLDAVSRDFVSVLHRRIKKAGSGNYSGDISDDLFRFAFESITNVIFG 176
Query: 194 VEIGTLAP--NLPDNRFA----QAFDTANIIVTLR------FIDPLWKIKRFLHLGS-EA 240
G L N RF Q F T+ ++ L F WK H+ + +
Sbjct: 177 ERQGMLEEVVNPEAQRFIDAIYQMFHTSVPMLNLPPDLFRLFRTKTWKD----HVAAWDV 232
Query: 241 LLDKSIKVIDDFTYSVIKRRKAEIQEARETSDGTKIKYDILTRFIELSEDPESNLTDKSL 300
+ K+ +F + + R+K + D I Y +L ED ++N+T+
Sbjct: 233 IFSKADIYTQNFYWEL--RQKGSVHH-----DYRGILYRLLGDSKMSFEDIKANVTE--- 282
Query: 301 RDVVLNFVIAGRDTTATTLTWGVYMAMTHNHVAEKLYSELKAFEADRAKEEKASLVQYDK 360
+ G DTT+ TL W +Y + V + L +E+ A +A+ + A+++Q
Sbjct: 283 ------MLAGGVDTTSMTLQWHLYEMARNLKVQDMLRAEVLA-ARHQAQGDMATMLQL-- 333
Query: 361 EDLESFNQRVTQFAGLLNYDSMGKLYYLHAVITETLRLYPAVPQDPKGILEDDVLPDGTK 420
+ L A I ETLRL+P + ++ D VL D
Sbjct: 334 ------------------------VPLLKASIKETLRLHPISVTLQRYLVNDLVLRD-YM 368
Query: 421 VKAGGMVTYVPYSMGRMEYNWGPDAASFKPERWLKDGVFQNASPFKFTAFQAGPRICLGK 480
+ A +V Y++GR E + D +F P RWL +N + F+ F G R CLG+
Sbjct: 369 IPAKTLVQVAIYALGR-EPTFFFDPENFDPTRWLSKD--KNITYFRNLGFGWGVRQCLGR 425
Query: 481 DSAYLQMKMALAILCRFFKFKL 502
A L+M + L + F+ ++
Sbjct: 426 RIAELEMTIFLINMLENFRVEI 447
>pdb|3LD6|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3LD6|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3JUS|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUS|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUV|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C
Length = 461
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/314 (22%), Positives = 129/314 (41%), Gaps = 51/314 (16%)
Query: 223 FIDPLWKIKRFLHLGSEALLDKSIKVIDDFTYSVIKRRKAEIQEARETSDGTKIKYDILT 282
F W + +L L S D++ + I D Y I++R+ +++E D DIL
Sbjct: 186 FSHAAWLLPGWLPLPSFRRRDRAHREIKDIFYKAIQKRR----QSQEKID------DILQ 235
Query: 283 RFIELSEDPESNLTDKSLRDVVLNFVIAGRDTTATTLTWGVYMAMTHNHVAEKLYSELKA 342
++ + LTD + +++ ++AG+ T++TT W + + +K Y E K
Sbjct: 236 TLLDATYKDGRPLTDDEVAGMLIGLLLAGQHTSSTTSAWMGFFLARDKTLQKKCYLEQKT 295
Query: 343 FEADRAKEEKASLVQYDKEDLESFNQRVTQFAGLLNYDSMGKLYYLHAVITETLRLYPAV 402
E+L L YD + L L I ETLRL P +
Sbjct: 296 VCG---------------ENLPP-----------LTYDQLKDLNLLDRCIKETLRLRPPI 329
Query: 403 ------PQDPKGILEDDVLPDGTKVKAGGMVTYVPYSMGRMEYNWGPDAASFKPERWLKD 456
+ P+ + G + G V P R++ +W + F P+R+L+D
Sbjct: 330 MIMMRMARTPQTVA-------GYTIPPGHQVCVSPTVNQRLKDSWV-ERLDFNPDRYLQD 381
Query: 457 GVFQNASPFKFTAFQAGPRICLGKDSAYLQMKMALAILCRFFKFKLVPDHPVKYRMMTIL 516
+ F + F AG C+G++ AY+Q+K + + R ++F L+ + T++
Sbjct: 382 NP-ASGEKFAYVPFGAGRHRCIGENFAYVQIKTIWSTMLRLYEFDLIDGYFPTVNYTTMI 440
Query: 517 SMEHGLKLTVERRS 530
+ +RRS
Sbjct: 441 HTPENPVIRYKRRS 454
>pdb|3EQM|A Chain A, Crystal Structure Of Human Placental Aromatase Cytochrome
P450 In Complex With Androstenedione
pdb|3S79|A Chain A, Human Placental Aromatase Cytochrome P450 (Cyp19a1)
Refined At 2.75 Angstrom
pdb|3S7S|A Chain A, Crystal Structure Of Human Placental Aromatase Complexed
With Breast Cancer Drug Exemestane
pdb|4GL5|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg029 (Compound 4)
pdb|4GL7|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg046 (Compound 5)
Length = 503
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 95/385 (24%), Positives = 154/385 (40%), Gaps = 59/385 (15%)
Query: 120 IFNVDGELWRKQRKTASFEFASKNLRDFSTKVFREYSLKLSSILTQASCHNQEIDMQELL 179
IFN + ELW+ R + L T L L + + + +D+ LL
Sbjct: 133 IFNNNPELWKTTRPFFMKALSGPGLVRMVTVCAESLKTHLDR-LEEVTNESGYVDVLTLL 191
Query: 180 MRMTLDSICKVGFGVEIGTLAPNLPDNRFAQAFDTANIIVTLRFIDPLWKIKRFLHLGSE 239
R+ LD+ + + + A + + A+ A +I F W K++
Sbjct: 192 RRVMLDTSNTLFLRIPLDESAIVVKIQGYFDAWQ-ALLIKPDIFFKISWLYKKY------ 244
Query: 240 ALLDKSIKVIDDFTYSVI--KRRKAEIQEARETSDGTKIKYDILTRFIELSEDPESNLTD 297
+KS+K + D +I KRR+ +E E D T I L+E +LT
Sbjct: 245 ---EKSVKDLKDAIEVLIAEKRRRISTEEKLEEC------MDFATELI-LAEK-RGDLTR 293
Query: 298 KSLRDVVLNFVIAGRDTTATTLTWGVYMAMTHNHVAEKLYSELKAFEADRAKEEKASLVQ 357
+++ +L +IA DT + +L + +++ H +V E + E++ +R
Sbjct: 294 ENVNQCILEMLIAAPDTMSVSLFFMLFLIAKHPNVEEAIIKEIQTVIGERD--------- 344
Query: 358 YDKEDLESFNQRVTQFAGLLNYDSMGKLYYLHAVITETLRLYPAVPQDPKGILEDDVLPD 417
+ D + KL + I E++R P V + LEDDV+ D
Sbjct: 345 -------------------IKIDDIQKLKVMENFIYESMRYQPVVDLVMRKALEDDVI-D 384
Query: 418 GTKVKAGGMVTYVPYSMGRME-YNWGPDAASFKPERWLKDGVFQNASPFKFTAFQAGPRI 476
G VK G T + ++GRM + P F E + K+ ++ PF F GPR
Sbjct: 385 GYPVKKG---TNIILNIGRMHRLEFFPKPNEFTLENFAKNVPYRYFQPFGF-----GPRG 436
Query: 477 CLGKDSAYLQMKMALAILCRFFKFK 501
C GK A + MK L L R F K
Sbjct: 437 CAGKYIAMVMMKAILVTLLRRFHVK 461
>pdb|2VE3|A Chain A, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE3|B Chain B, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE4|A Chain A, Substrate Free Cyanobacterial Cyp120a1
pdb|2VE4|B Chain B, Substrate Free Cyanobacterial Cyp120a1
Length = 444
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 94/228 (41%), Gaps = 30/228 (13%)
Query: 279 DILTRFIELSEDPESNLTDKSLRDVVLNFVIAGRDTTATTLTWGVYMAMTHNHVAEKLYS 338
D L + +D L+ L+D +L + AG +T + L+ + H+ + E++
Sbjct: 223 DALGILLAARDDNNQPLSLPELKDQILLLLFAGHETLTSALSSFCLLLGQHSDIRERVRQ 282
Query: 339 ELKAFEADRAKEEKASLVQYDKEDLESFNQRVTQFAGLLNYDSMGKLYYLHAVITETLRL 398
E Q Q + L +++ K+ YL V+ E LRL
Sbjct: 283 E----------------------------QNKLQLSQELTAETLKKMPYLDQVLQEVLRL 314
Query: 399 YPAVPQDPKGILEDDVLPDGTKVKAGGMVTYVPYSMGRMEYNWGPDAASFKPERWLKDGV 458
P V + +++D G G +V+Y S + + PD F PER+ DG
Sbjct: 315 IPPVGGGFRELIQDCQF-QGFHFPKGWLVSYQ-ISQTHADPDLYPDPEKFDPERFTPDGS 372
Query: 459 FQNASPFKFTAFQAGPRICLGKDSAYLQMKMALAILCRFFKFKLVPDH 506
+ PF F G R CLGK+ A L+MK+ L + F + L+P
Sbjct: 373 ATHNPPFAHVPFGGGLRECLGKEFARLEMKLFATRLIQQFDWTLLPGQ 420
>pdb|3DBG|A Chain A, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3DBG|B Chain B, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3EL3|A Chain A, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
pdb|3EL3|B Chain B, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
Length = 467
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 94/466 (20%), Positives = 183/466 (39%), Gaps = 60/466 (12%)
Query: 44 PFVGAAIEQLMNYDRMHDWLVNYLSELK----TVVVPMPFTTYTYIADPANVEHVLKTNF 99
P G + L + R+ + ++S+L+ V + + T + +P + L N
Sbjct: 25 PVAGGGVPLLGHGWRLARDPLAFMSQLRDHGDVVRIKLGPKTVYAVTNP-ELTGALALNP 83
Query: 100 ANYPKGETYHSYMEVLLG-DGIFNVDGELWRKQRKTASFEFASKNLRDFSTKVFREYSLK 158
+ G + S +E LLG +G+ +G L R+QR+T F + + + E +
Sbjct: 84 DYHIAGPLWES-LEGLLGKEGVATANGPLHRRQRRTIQPAFRLDAIPAYG-PIMEEEAHA 141
Query: 159 LSSILTQASCHNQEIDMQELLMRMTLDSICKVGFGVEIGTLAPNLPDNRFAQAFDTANII 218
L+ + + + +R+ + + + E R A T
Sbjct: 142 LTERWQPGKTVDATSESFRVAVRVAARCLLRGQYMDERA--------ERLCVALATVFRG 193
Query: 219 VTLRFIDPLWKIKRFLHLGSEALLDKSIKVIDDFTYSVIKRRKAEIQEARETSDGTKIKY 278
+ R + PL + R L L + + ++ + +I R+A Q+
Sbjct: 194 MYRRMVVPLGPLYR-LPLPANRRFNDALADLHLLVDEIIAERRASGQK----------PD 242
Query: 279 DILTRFIELSEDPESNLTDKSLRDVVLNFVIAGRDTTATTLTWGVYMAMTHNHVAEKLYS 338
D+LT +E +D + ++ + D V+ + G +T A+T+ W + H A+++
Sbjct: 243 DLLTALLEAKDDNGDPIGEQEIHDQVVAILTPGSETIASTIMWLLQALADHPEHADRIRD 302
Query: 339 ELKAFEADRAKEEKASLVQYDKEDLESFNQRVTQFAGLLNYDSMGKLYYLHAVITETLRL 398
E++A R + ++ + KL + VI E +RL
Sbjct: 303 EVEAVTGGRP----------------------------VAFEDVRKLRHTGNVIVEAMRL 334
Query: 399 YPAV-PQDPKGILEDDVLPDGTKVKAGGMVTYVPYSMGRMEYNWGPDAASFKPERWLKDG 457
PAV + + E ++ G ++ AG + Y PY++ R ++ D F P+RWL +
Sbjct: 335 RPAVWVLTRRAVAESEL--GGYRIPAGADIIYSPYAIQRDPKSYD-DNLEFDPDRWLPER 391
Query: 458 VFQNASPFKFTAFQAGPRICLGKDSAYLQMKMALAILCRFFKFKLV 503
N + F AG R C + Q+ + A L ++F+ V
Sbjct: 392 A-ANVPKYAMKPFSAGKRKCPSDHFSMAQLTLITAALATKYRFEQV 436
>pdb|3K9V|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9V|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9Y|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
pdb|3K9Y|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
Length = 482
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 98/230 (42%), Gaps = 41/230 (17%)
Query: 292 ESNLTDKSLRDVVLNFVIAGRDTTATTLTWGVYMAMTHNHVAEKLYSELKAFEADRAKEE 351
+ +L+ K L V +A +TTA +L W +Y + +L E+++ D
Sbjct: 276 QDHLSKKELYAAVTELQLAAVETTANSLMWILYNLSRNPQAQRRLLQEVQSVLPDNQTPR 335
Query: 352 KASLVQYDKEDLESFNQRVTQFAGLLNYDSMGKLYYLHAVITETLRLYPAVP-----QDP 406
EDL + + YL A + E++RL P+VP D
Sbjct: 336 --------AEDLRN-------------------MPYLKACLKESMRLTPSVPFTTRTLDK 368
Query: 407 KGILEDDVLPDGTKVKAGGMVTYVPYSMGRMEYNWGPDAASFKPERWLKDGVFQNASPFK 466
+L + LP GT + V +G E N+ D+ F+PERWL+ + +PF
Sbjct: 369 PTVLGEYALPKGTVLTLNTQV------LGSSEDNFE-DSHKFRPERWLQKE--KKINPFA 419
Query: 467 FTAFQAGPRICLGKDSAYLQMKMALAILCRFFKFKLVPDHPVKYRMMTIL 516
F G R+C+G+ A LQ+ +AL + + + + PV+ + IL
Sbjct: 420 HLPFGIGKRMCIGRRLAELQLHLALCWIIQKYDIVATDNEPVEMLHLGIL 469
>pdb|3MZS|A Chain A, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|B Chain B, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|C Chain C, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|D Chain D, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
Length = 486
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 123/501 (24%), Positives = 197/501 (39%), Gaps = 94/501 (18%)
Query: 24 SWILLIHWWSQK-NQRGPKTWPFVGAAIEQLMNYDRMHDWLVNYLSELKTVVVPMPFTTY 82
W+ L H+W +K +QR + N+ + L L++V
Sbjct: 20 GWLNLYHFWREKGSQR---------IHFRHIENFQKYGPIYREKLGNLESV--------- 61
Query: 83 TYIADPANVEHVLKTNFA-----NYPKGETYHSYMEVLLGDGIFNVDGELWRKQRKTASF 137
YI P +V H+ K + + P YH Y + +G +F G W+K R +
Sbjct: 62 -YIIHPEDVAHLFKFEGSYPERYDIPPWLAYHRYYQKPIG-VLFKKSGT-WKKDRVVLNT 118
Query: 138 EF----ASKNLRDFSTKVFREYSLKLSSILTQASCHNQEIDMQELLMRMTLDSICKVGFG 193
E A KN V +++ L + Q D++E L +SI V FG
Sbjct: 119 EVMAPEAIKNFIPLLNPVSQDFVSLLHKRIKQQGSGKFVGDIKEDLFHFAFESITNVMFG 178
Query: 194 VEIGTLAPNLPDNRFAQAFDTA-----NIIVTLRFIDP----LWKIKRFL-HLGS-EALL 242
+G L + N AQ F A + V L + P L++ K + H+ + + +
Sbjct: 179 ERLGMLEETV--NPEAQKFIDAVYKMFHTSVPLLNVPPELYRLFRTKTWRDHVAAWDTIF 236
Query: 243 DKSIKVIDDFTYSVIKRRKAEIQEARETSDGTKIKYDILTRFIELSEDPESNLTDKSLRD 302
+K+ K + F + RRK E + + I Y +L L ED ++N+T+
Sbjct: 237 NKAEKYTEIFYQDL--RRKTEFR------NYPGILYCLLKSEKMLLEDVKANITE----- 283
Query: 303 VVLNFVIAGRDTTATTLTWGVYMAMTHNHVAEKLYSELKAFEADRAKEEKASLVQYDKED 362
+ G +TT+ TL W +Y +V E L E+ A R E S
Sbjct: 284 ----MLAGGVNTTSMTLQWHLYEMARSLNVQEMLREEV--LNARRQAEGDIS-------- 329
Query: 363 LESFNQRVTQFAGLLNYDSMGKLYYLHAVITETLRLYPAVPQDPKGILEDDVLPDGTKVK 422
++ Q LL A I ETLRL+P + + E D++ +
Sbjct: 330 ------KMLQMVPLLK-----------ASIKETLRLHP-ISVTLQRYPESDLVLQDYLIP 371
Query: 423 AGGMVTYVPYSMGR-MEYNWGPDAASFKPERWLKDGVFQNASPFKFTAFQAGPRICLGKD 481
A +V Y+MGR + PD F P RWL ++ F+ F G R C+G+
Sbjct: 372 AKTLVQVAIYAMGRDPAFFSSPD--KFDPTRWLSKD--KDLIHFRNLGFGWGVRQCVGRR 427
Query: 482 SAYLQMKMALAILCRFFKFKL 502
A L+M + L + FK ++
Sbjct: 428 IAELEMTLFLIHILENFKVEM 448
>pdb|3QZ1|A Chain A, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|B Chain B, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|C Chain C, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|D Chain D, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
Length = 496
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 91/360 (25%), Positives = 142/360 (39%), Gaps = 74/360 (20%)
Query: 163 LTQASCHNQEID------MQELLMRMTLDSICKVGFGVEIGTLAPNLPD--NRFAQAFDT 214
LTQ C + +Q+ +T IC + FG + TL D + +D
Sbjct: 143 LTQEFCERMRVQAGAPVTIQKEFSLLTCSIICYLTFGNKEDTLVHAFHDCVQDLMKTWDH 202
Query: 215 ANIIVT-----LRFI-DP-LWKIKRFLHLGSEALLDKSIKVIDDFTYSVIKRRKAEIQEA 267
+I + LRF +P LW++K+ + + +++K + RR E A
Sbjct: 203 WSIQILDMVPFLRFFPNPGLWRLKQAIE-NRDHMVEKQL------------RRHKESMVA 249
Query: 268 RETSDGTKIKYDILTRFIELSEDPESNLTDKSLRDVVLNFVIAGRDTTATTLTWGVYMAM 327
+ D T + R + E+ L + + V++ I G +TTA+TL+W V +
Sbjct: 250 GQWRDMTDYMLQGVGR--QRVEEGPGQLLEGHVHMSVVDLFIGGTETTASTLSWAVAFLL 307
Query: 328 THNHVAEKLYSELKAFEADRAKEEKASLVQYDKEDLESFNQRVTQFAGLLNYDSMGKLYY 387
H + +L EL DR AS RVT Y +L
Sbjct: 308 HHPEIQRRLQEEL-----DRELGPGASC------------SRVT-------YKDRARLPL 343
Query: 388 LHAVITETLRLYPAVP-------QDPKGILEDDVLPDGTKVKAGGMVTYVPYSMGRMEYN 440
L+A I E LRL P VP P I D+ P+ GMV ++
Sbjct: 344 LNATIAEVLRLRPVVPLALPHRTTRPSSIFGYDI-PE-------GMVVIPNLQGAHLDET 395
Query: 441 WGPDAASFKPERWLKDGVFQNASPFKFTAFQAGPRICLGKDSAYLQMKMALAILCRFFKF 500
F+P+R+L+ G +A AF G R+CLG+ A L++ + LA L + F
Sbjct: 396 VWEQPHEFRPDRFLEPGANPSA-----LAFGCGARVCLGESLARLELFVVLARLLQAFTL 450
>pdb|3QM4|A Chain A, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3QM4|B Chain B, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3TBG|A Chain A, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|B Chain B, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|C Chain C, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|D Chain D, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TDA|A Chain A, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|B Chain B, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|C Chain C, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|D Chain D, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
Length = 479
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 96/251 (38%), Gaps = 39/251 (15%)
Query: 264 IQEARETSDGTKIKYDILTRFIELSE----DPESNLTDKSLRDVVLNFVIAGRDTTATTL 319
+ E R T D + D+ F+ E +PES+ D++LR VV + AG TT+TTL
Sbjct: 233 LTEHRMTWDPAQPPRDLTEAFLAEMEKAKGNPESSFNDENLRIVVADLFSAGMVTTSTTL 292
Query: 320 TWGVYMAMTHNHVAEKLYSELKAFEADRAKEEKASLVQYDKEDLESFNQRVTQFAGLLNY 379
WG+ + + H V ++ Q + G +
Sbjct: 293 AWGLLLMILHPDVQRRV------------------------------QQEIDDVIGQVRR 322
Query: 380 DSMG---KLYYLHAVITETLRLYPAVPQDPKGILEDDVLPDGTKVKAGGMVTYVPYSMGR 436
MG + Y AVI E R VP + D+ G ++ G + S+ +
Sbjct: 323 PEMGDQAHMPYTTAVIHEVQRFGDIVPLGVTHMTSRDIEVQGFRIPKGTTLITNLSSVLK 382
Query: 437 MEYNWGPDAASFKPERWLKDGVFQNASPFKFTAFQAGPRICLGKDSAYLQMKMALAILCR 496
E W F PE +L D P F F AG R CLG+ A +++ + L +
Sbjct: 383 DEAVWE-KPFRFHPEHFL-DAQGHFVKPEAFLPFSAGRRACLGEPLARMELFLFFTSLLQ 440
Query: 497 FFKFKLVPDHP 507
F F + P
Sbjct: 441 HFSFSVPTGQP 451
>pdb|2F9Q|A Chain A, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|B Chain B, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|C Chain C, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|D Chain D, Crystal Structure Of Human Cytochrome P450 2d6
Length = 479
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 96/251 (38%), Gaps = 39/251 (15%)
Query: 264 IQEARETSDGTKIKYDILTRFIELSE----DPESNLTDKSLRDVVLNFVIAGRDTTATTL 319
+ E R T D + D+ F+ E +PES+ D++LR VV + AG TT+TTL
Sbjct: 233 LTEHRMTWDPAQPPRDLTEAFLAEMEKAKGNPESSFNDENLRIVVADLFSAGMVTTSTTL 292
Query: 320 TWGVYMAMTHNHVAEKLYSELKAFEADRAKEEKASLVQYDKEDLESFNQRVTQFAGLLNY 379
WG+ + + H V ++ Q + G +
Sbjct: 293 AWGLLLMILHPDVQRRV------------------------------QQEIDDVIGQVRR 322
Query: 380 DSMG---KLYYLHAVITETLRLYPAVPQDPKGILEDDVLPDGTKVKAGGMVTYVPYSMGR 436
MG + Y AVI E R VP + D+ G ++ G + S+ +
Sbjct: 323 PEMGDQAHMPYTTAVIHEVQRFGDIVPLGMTHMTSRDIEVQGFRIPKGTTLITNLSSVLK 382
Query: 437 MEYNWGPDAASFKPERWLKDGVFQNASPFKFTAFQAGPRICLGKDSAYLQMKMALAILCR 496
E W F PE +L D P F F AG R CLG+ A +++ + L +
Sbjct: 383 DEAVWE-KPFRFHPEHFL-DAQGHFVKPEAFLPFSAGRRACLGEPLARMELFLFFTSLLQ 440
Query: 497 FFKFKLVPDHP 507
F F + P
Sbjct: 441 HFSFSVPTGQP 451
>pdb|3C6G|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3C6G|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3DL9|A Chain A, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
pdb|3DL9|B Chain B, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
Length = 479
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 115/301 (38%), Gaps = 42/301 (13%)
Query: 234 LHLGSEALLDKSIKVIDDFTYSVIKRRKAEIQEARETSDGTKIKYDILTRFIELSEDPES 293
L G L ++ V+ DF +I+ KA + + Y L + DP S
Sbjct: 212 LPFGKHQQLFRNAAVVYDFLSRLIE--KASVNRKPQLPQHFVDAY--LDEMDQGKNDPSS 267
Query: 294 NLTDKSLRDVVLNFVIAGRDTTATTLTWGVYMAMTHNHVAEKLYSELKAFEADRAKEEKA 353
+ ++L V +IAG +TT L W + + ++ ++ E+ K
Sbjct: 268 TFSKENLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQGQVQKEIDLIMGPNGKP--- 324
Query: 354 SLVQYDKEDLESFNQRVTQFAGLLNYDSMGKLYYLHAVITETLRLYPAVPQDPKGILEDD 413
++D K+ Y AV+ E LR VP +D
Sbjct: 325 ------------------------SWDDKCKMPYTEAVLHEVLRFCNIVPLGIFHATSED 360
Query: 414 VLPDGTKVKAGGMVTYVPYSMGRMEYNWGPDAASFKPERWL-KDGVFQNASPFKFTAFQA 472
+ G + G V YS+ E W D F PER+L G F A F
Sbjct: 361 AVVRGYSIPKGTTVITNLYSVHFDEKYWR-DPEVFHPERFLDSSGYF--AKKEALVPFSL 417
Query: 473 GPRICLGKDSAYLQMKMAL-AILCRF---FKFKLVPDHPVKYRMMTILSMEHGLKLTVER 528
G R CLG+ A ++M + A+L RF F +LVPD +K R+ L + L + ER
Sbjct: 418 GRRHCLGEHLARMEMFLFFTALLQRFHLHFPHELVPD--LKPRLGMTLQPQPYL-ICAER 474
Query: 529 R 529
R
Sbjct: 475 R 475
>pdb|3CZH|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
pdb|3CZH|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
Length = 481
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 115/301 (38%), Gaps = 42/301 (13%)
Query: 234 LHLGSEALLDKSIKVIDDFTYSVIKRRKAEIQEARETSDGTKIKYDILTRFIELSEDPES 293
L G L ++ V+ DF +I+ KA + + Y L + DP S
Sbjct: 212 LPFGKHQQLFRNAAVVYDFLSRLIE--KASVNRKPQLPQHFVDAY--LDEMDQGKNDPSS 267
Query: 294 NLTDKSLRDVVLNFVIAGRDTTATTLTWGVYMAMTHNHVAEKLYSELKAFEADRAKEEKA 353
+ ++L V +IAG +TT L W + + ++ ++ E+ K
Sbjct: 268 TFSKENLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQGQVQKEIDLIMGPNGKP--- 324
Query: 354 SLVQYDKEDLESFNQRVTQFAGLLNYDSMGKLYYLHAVITETLRLYPAVPQDPKGILEDD 413
++D K+ Y AV+ E LR VP +D
Sbjct: 325 ------------------------SWDDKCKMPYTEAVLHEVLRFCNIVPLGIFHATSED 360
Query: 414 VLPDGTKVKAGGMVTYVPYSMGRMEYNWGPDAASFKPERWL-KDGVFQNASPFKFTAFQA 472
+ G + G V YS+ E W D F PER+L G F A F
Sbjct: 361 AVVRGYSIPKGTTVITNLYSVHFDEKYWR-DPEVFHPERFLDSSGYF--AKKEALVPFSL 417
Query: 473 GPRICLGKDSAYLQMKMAL-AILCRF---FKFKLVPDHPVKYRMMTILSMEHGLKLTVER 528
G R CLG+ A ++M + A+L RF F +LVPD +K R+ L + L + ER
Sbjct: 418 GRRHCLGEHLARMEMFLFFTALLQRFHLHFPHELVPD--LKPRLGMTLQPQPYL-ICAER 474
Query: 529 R 529
R
Sbjct: 475 R 475
>pdb|3EBS|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3T3Q|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
Length = 476
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 115/505 (22%), Positives = 189/505 (37%), Gaps = 119/505 (23%)
Query: 39 GPKTWPFVGAAIEQLMNYDRMHDWLVNYLSELKTVVVPM---PFTTYTYIADPANVEHVL 95
GP PF+G ++ +N ++M++ L+ +SE V + P A E ++
Sbjct: 14 GPTPLPFIGNYLQ--LNTEQMYNSLMK-ISERYGPVFTIHLGPRRVVVLCGHDAVREALV 70
Query: 96 KTNFANYPKGETYHSYMEVLLGDGIFNVDGELWRKQRKTASFEFASKNLRDFSTKVFREY 155
+GE ++ V G G+ +GE +K LR FS R++
Sbjct: 71 DQAEEFSGRGEQA-TFDWVFKGYGVVFSNGE-------------RAKQLRRFSIATLRDF 116
Query: 156 SLKLSSILTQASCHNQEIDMQELLMRMTLDSICKVGFGVEI--GTLAPNLPDNRFAQAFD 213
+ I E +QE + GF ++ GT N+ D F +
Sbjct: 117 GVGKRGI---------EERIQE-----------EAGFLIDALRGTGGANI-DPTFFLSRT 155
Query: 214 TANIIVTLRFIDPL-WKIKRFLHL-----GSEALLDKSIKVIDDFTYSVIKRRKAEIQEA 267
+N+I ++ F D +K K FL L GS S + + SV+K Q+A
Sbjct: 156 VSNVISSIVFGDRFDYKDKEFLSLLRMMLGSFQFTSTSTGQLYEMFSSVMKHLPGPQQQA 215
Query: 268 RETSDG------TKIKYD---------------ILTRFIELSEDPESNLTDKSLRDVVLN 306
+ G K++++ L R E ++P + K+L LN
Sbjct: 216 FQLLQGLEDFIAKKVEHNQRTLDPNSPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLN 275
Query: 307 FVIAGRDTTATTLTWGVYMAMTHNHVAEKLYSELKAFEADRAKEEKASLVQYDKEDLESF 366
AG +T +TTL +G + M H V K++ E+ DR K F
Sbjct: 276 LFFAGTETVSTTLRYGFLLLMKHPEVEAKVHEEI-----DRV---------IGKNRQPKF 321
Query: 367 NQRVTQFAGLLNYDSMGKLYYLHAVITETLRLYPAVP--------QDPKGILEDDVLPDG 418
R K+ Y+ AVI E R +P +D K D LP G
Sbjct: 322 EDRA-------------KMPYMEAVIHEIQRFGDVIPMGLARRVKKDTK--FRDFFLPKG 366
Query: 419 TKVKAG-GMVTYVPYSMGRMEYNWGPDAASFKPERWLKD-GVFQNASPFKFTAFQAGPRI 476
T+V G V P ++ + F P+ +L + G F+ + F F G R
Sbjct: 367 TEVYPMLGSVLRDP--------SFFSNPQDFNPQHFLNEKGQFKKSD--AFVPFSIGKRN 416
Query: 477 CLGKDSAYLQMKMALAILCRFFKFK 501
C G+ A +++ + + + F+ K
Sbjct: 417 CFGEGLARMELFLFFTTVMQNFRLK 441
>pdb|3E4E|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E4E|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E6I|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3E6I|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3GPH|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3GPH|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3KOH|A Chain A, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3KOH|B Chain B, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3LC4|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3LC4|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3T3Z|A Chain A, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|B Chain B, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|C Chain C, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|D Chain D, Human Cytochrome P450 2e1 In Complex With Pilocarpine
Length = 476
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 98/235 (41%), Gaps = 50/235 (21%)
Query: 304 VLNFVIAGRDTTATTLTWGVYMAMTHNHVAEKLYSELKAFEADRAKEEKASLVQYDKEDL 363
V + AG +TT+TTL +G+ + M + + EKL+ E+ DR D++++
Sbjct: 272 VADLFFAGTETTSTTLRYGLLILMKYPEIEEKLHEEI-----DRVIGPSRIPAIKDRQEM 326
Query: 364 ESFNQRVTQFAGLLNYDSMGKLYYLHAVITETLRLYPAVPQDPKGILEDDVLPDGTKVKA 423
Y+ AV+ E R VP + D + G +
Sbjct: 327 P----------------------YMDAVVHEIQRFITLVPSNLPHEATRDTIFRGYLIPK 364
Query: 424 GGMVTYVPYSMGRMEYNWG--PDAASFKPERWL-KDGVFQNASPFKFTAFQAGPRICLGK 480
G +V VP ++ + Y+ PD FKPE +L ++G F+ + FK F G R+C G+
Sbjct: 365 GTVV--VP-TLDSVLYDNQEFPDPEKFKPEHFLNENGKFKYSDYFK--PFSTGKRVCAGE 419
Query: 481 DSAYLQMKMALAILCRFFKFK---------LVPDH------PVKYRMMTILSMEH 520
A +++ + L + + F K L P H P +Y++ I H
Sbjct: 420 GLARMELFLLLCAILQHFNLKPLVDPKDIDLSPIHIGFGCIPPRYKLCVIPRSHH 474
>pdb|3RUK|A Chain A, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|B Chain B, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|C Chain C, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|D Chain D, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3SWZ|A Chain A, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|B Chain B, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|C Chain C, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|D Chain D, Human Cytochrome P450 17a1 In Complex With Tok-001
Length = 494
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 90/398 (22%), Positives = 152/398 (38%), Gaps = 55/398 (13%)
Query: 121 FNVDGELWRKQRKTASFEFASKNLRDFSTKVFREYSLKLSSILTQASCHN-QEIDMQELL 179
F G W+ R+ A FA +D K+ + ++S++ + HN Q ID+ +
Sbjct: 96 FADSGAHWQLHRRLAMATFAL--FKDGDQKLEKIICQEISTLCDMLATHNGQSIDISFPV 153
Query: 180 MRMTLDSICKVGFGVEIGTLAPNLPDNRFAQAFDTANIIVTLRFIDPLWKIKRFLHLGSE 239
+ I + F P L Q ++ I+ D L + +L +
Sbjct: 154 FVAVTNVISLICFNTSYKNGDPEL---NVIQNYNEG--IIDNLSKDSLVDLVPWLKIFPN 208
Query: 240 ALLDK---SIKVIDDFTYSVIKRRKAEIQEARETSDGTKIKYDILTRFIELSED----PE 292
L+K +K+ +D +++ K + + SD D L + S++ P+
Sbjct: 209 KTLEKLKSHVKIRNDLLNKILENYKEKFR-----SDSITNMLDTLMQAKMNSDNGNAGPD 263
Query: 293 SN---LTDKSLRDVVLNFVIAGRDTTATTLTWGVYMAMTHNHVAEKLYSELKAFEADRAK 349
+ L+D + + + AG +TT + + W + + + V +KLY E+
Sbjct: 264 QDSELLSDNHILTTIGDIFGAGVETTTSVVKWTLAFLLHNPQVKKKLYEEI--------- 314
Query: 350 EEKASLVQYDKEDLESFNQRVTQFAGLLNYDSMGKLYYLHAVITETLRLYPAVPQDPKGI 409
+Q V F+ +L L A I E LRL P P
Sbjct: 315 -----------------DQNVG-FSRTPTISDRNRLLLLEATIREVLRLRPVAPMLIPHK 356
Query: 410 LEDDVLPDGTKVKAGGMVTYVPYSMGRMEYNW-GPDAASFKPERWLKDGVFQNASP-FKF 467
D V G V +++ E W PD F PER+L Q SP +
Sbjct: 357 ANVDSSIGEFAVDKGTEVIINLWALHHNEKEWHQPD--QFMPERFLNPAGTQLISPSVSY 414
Query: 468 TAFQAGPRICLGKDSAYLQMKMALAILCRFFKFKLVPD 505
F AGPR C+G+ A ++ + +A L + F + VPD
Sbjct: 415 LPFGAGPRSCIGEILARQELFLIMAWLLQRFDLE-VPD 451
>pdb|1Z10|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z11|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|2FDU|A Chain A, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|B Chain B, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|C Chain C, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|D Chain D, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|A Chain A, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|B Chain B, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|C Chain C, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|D Chain D, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDY|A Chain A, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|B Chain B, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|C Chain C, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|D Chain D, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|3T3R|A Chain A, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|B Chain B, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|C Chain C, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|D Chain D, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|4EJJ|A Chain A, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|B Chain B, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|C Chain C, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|D Chain D, Human Cytochrome P450 2a6 In Complex With Nicotine
Length = 476
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 111/505 (21%), Positives = 192/505 (38%), Gaps = 119/505 (23%)
Query: 39 GPKTWPFVGAAIEQLMNYDRMHDWLVNYLSELKTVVVPM---PFTTYTYIADPANVEHVL 95
GP PF+G ++ +N ++M++ L+ +SE V + P A E ++
Sbjct: 14 GPTPLPFIGNYLQ--LNTEQMYNSLMK-ISERYGPVFTIHLGPRRVVVLCGHDAVREALV 70
Query: 96 KTNFANYPKGETYHSYMEVLLGDGIFNVDGELWRKQRKTASFEFASKNLRDFSTKVFREY 155
+GE ++ V G G+ +GE +K LR FS R++
Sbjct: 71 DQAEEFSGRGEQA-TFDWVFKGYGVVFSNGE-------------RAKQLRRFSIATLRDF 116
Query: 156 SLKLSSILTQASCHNQEIDMQELLMRMTLDSICKVGFGVEI--GTLAPNLPDNRFAQAFD 213
+ I E +QE + GF ++ GT N+ D F +
Sbjct: 117 GVGKRGI---------EERIQE-----------EAGFLIDALRGTGGANI-DPTFFLSRT 155
Query: 214 TANIIVTLRFIDPL-WKIKRFLHL-----GSEALLDKSIKVIDDFTYSVIKRRKAEIQEA 267
+N+I ++ F D +K K FL L G S + + SV+K Q+A
Sbjct: 156 VSNVISSIVFGDRFDYKDKEFLSLLRMMLGIFQFTSTSTGQLYEMFSSVMKHLPGPQQQA 215
Query: 268 RETSDG------TKIKYD---------------ILTRFIELSEDPESNLTDKSLRDVVLN 306
+ G K++++ L R E ++P + K+L LN
Sbjct: 216 FQLLQGLEDFIAKKVEHNQRTLDPNSPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLN 275
Query: 307 FVIAGRDTTATTLTWGVYMAMTHNHVAEKLYSELKAFEADRAKEEKASLVQYDKEDLESF 366
I G +T +TTL +G + M H V K++ E+ DR ++ +++
Sbjct: 276 LFIGGTETVSTTLRYGFLLLMKHPEVEAKVHEEI-----DR-------VIGKNRQP---- 319
Query: 367 NQRVTQFAGLLNYDSMGKLYYLHAVITETLRLYPAVP--------QDPKGILEDDVLPDG 418
++ K+ Y+ AVI E R +P +D K D LP G
Sbjct: 320 -----------KFEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTK--FRDFFLPKG 366
Query: 419 TKVKAG-GMVTYVPYSMGRMEYNWGPDAASFKPERWLKD-GVFQNASPFKFTAFQAGPRI 476
T+V G V P ++ + F P+ +L + G F+ + F F G R
Sbjct: 367 TEVYPMLGSVLRDP--------SFFSNPQDFNPQHFLNEKGQFKKSD--AFVPFSIGKRN 416
Query: 477 CLGKDSAYLQMKMALAILCRFFKFK 501
C G+ A +++ + + + F+ K
Sbjct: 417 CFGEGLARMELFLFFTTVMQNFRLK 441
>pdb|3L4D|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
Length = 453
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 80/408 (19%), Positives = 157/408 (38%), Gaps = 66/408 (16%)
Query: 109 HSYMEVLLGDGI-FNVDGELWRKQRKTASFEFASKNLRDFSTKVFREYSLKLSSILTQAS 167
+S+M + G+G+ + R+Q + E ++F+ + E + + +
Sbjct: 75 YSFMVPVFGEGVAYAAPYPRMREQLNFLAEELTVAKFQNFAPSIQHEVRKFMKANWNK-- 132
Query: 168 CHNQEIDMQELLMRMTLDSICKVGFGVEIGTLAPNLPDNRFAQAFDTANIIVTLRFIDPL 227
EI++ + M +++ C+ FG + L L +FAQ + +
Sbjct: 133 -DEGEINILDDCSAMIINTACQCLFGED---LRKRLDARQFAQLLAKMESCLIPAAVFLP 188
Query: 228 WKIKRFLHLGSEALLDKSIKVIDDFTYSVIKRRKAEIQEARETSDGTKIKYDILTRFIEL 287
W +K L S D ++ D + +I R K E Q+ TSD +L +
Sbjct: 189 WILKLPLP-QSYRCRDARAELQDILSEIIIAREKEEAQKDTNTSD-------LLAGLLGA 240
Query: 288 SEDPESNLTDKSLRDVVLNFVIAGRDTTATTLTWGVYMAMTHNHVAEKLYSELKAFEADR 347
+ ++ + +++ + AG+ T+ T TW + M
Sbjct: 241 VYRDGTRMSQHEVCGMIVAAMFAGQHTSTITTTWSLLHLMDPR----------------- 283
Query: 348 AKEEKASLVQYDKEDLESFNQRVTQFAGLLNYDS-MGKLYYLHAVITETLRLYPAVPQDP 406
+K L +Q + +F LNYD+ M ++ + E++R P +
Sbjct: 284 -----------NKRHLAKLHQEIDEFPAQLNYDNVMEEMPFAEQCARESIRRDPPLVMLM 332
Query: 407 KGILEDD-----VLPDGTKVKAGGMVTYVPYSMGRMEYNWGPDAASFKPERWLK--DGVF 459
+ +L+ V+P+G + ++++ + P+ + PER +K DG F
Sbjct: 333 RKVLKPVQVGKYVVPEGDIIACSPLLSH-------QDEEAFPNPREWNPERNMKLVDGAF 385
Query: 460 QNASPFKFTAFQAGPRICLGKDSAYLQMKMALAILCRFFKFKLVPDHP 507
F AG C+G+ LQ+K LA + R + F+L+ P
Sbjct: 386 --------CGFGAGVHKCIGEKFGLLQVKTVLATVLRDYDFELLGPLP 425
>pdb|2P85|A Chain A, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|B Chain B, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|C Chain C, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|D Chain D, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|E Chain E, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|F Chain F, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|3T3S|A Chain A, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|B Chain B, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|C Chain C, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|D Chain D, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|E Chain E, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|F Chain F, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|G Chain G, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|H Chain H, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|4EJG|A Chain A, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|B Chain B, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|C Chain C, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|D Chain D, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|E Chain E, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|F Chain F, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|G Chain G, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|H Chain H, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJH|A Chain A, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|B Chain B, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|C Chain C, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|D Chain D, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|E Chain E, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|F Chain F, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|G Chain G, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|H Chain H, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJI|A Chain A, Human Cytochrome P450 2a13 In Complex With Two Molecules
Of 4- (Methylnitrosamino)-1-(3-Puridyl)-1-Butanone
Length = 476
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 80/342 (23%), Positives = 133/342 (38%), Gaps = 77/342 (22%)
Query: 197 GTLAPNLPDNRFAQAFDTANIIVTLRFIDPL-WKIKRFLHL-----GSEALLDKSIKVID 250
GT N+ D F + +N+I ++ F D ++ K FL L GS S +
Sbjct: 140 GTHGANI-DPTFFLSRTVSNVISSIVFGDRFDYEDKEFLSLLRMMLGSFQFTATSTGQLY 198
Query: 251 DFTYSVIKRRKAEIQEARETSDG------TKIKYD---------------ILTRFIELSE 289
+ SV+K Q+A + G K++++ L R E +
Sbjct: 199 EMFSSVMKHLPGPQQQAFKELQGLEDFIAKKVEHNQRTLDPNSPRDFIDSFLIRMQEEEK 258
Query: 290 DPESNLTDKSLRDVVLNFVIAGRDTTATTLTWGVYMAMTHNHVAEKLYSELKAFEADRAK 349
+P + K+L LN AG +T +TTL +G + M H V K++ E+ DR
Sbjct: 259 NPNTEFYLKNLVMTTLNLFFAGTETVSTTLRYGFLLLMKHPEVEAKVHEEI-----DR-- 311
Query: 350 EEKASLVQYDKEDLESFNQRVTQFAGLLNYDSMGKLYYLHAVITETLRLYPAVP------ 403
++ +++ ++ K+ Y AVI E R +P
Sbjct: 312 -----VIGKNRQP---------------KFEDRAKMPYTEAVIHEIQRFGDMLPMGLAHR 351
Query: 404 --QDPKGILEDDVLPDGTKV-KAGGMVTYVPYSMGRMEYNWGPDAASFKPERWL-KDGVF 459
+D K D LP GT+V G V P + + F P+ +L K G F
Sbjct: 352 VNKDTK--FRDFFLPKGTEVFPMLGSVLRDP--------RFFSNPRDFNPQHFLDKKGQF 401
Query: 460 QNASPFKFTAFQAGPRICLGKDSAYLQMKMALAILCRFFKFK 501
+ + F F G R C G+ A +++ + + + F+FK
Sbjct: 402 KKSD--AFVPFSIGKRYCFGEGLARMELFLFFTTIMQNFRFK 441
>pdb|1N97|A Chain A, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
pdb|1N97|B Chain B, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
Length = 389
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 84/438 (19%), Positives = 147/438 (33%), Gaps = 114/438 (26%)
Query: 73 VVVPMPFTTYTYIADPANVEHVLKTNFANYPKGETYHSYMEVLLGDGIFNVDGELWRKQR 132
+ +P+P I DP VE L K + + L G G+ GE W++ R
Sbjct: 34 LFLPLPRFPLALIFDPEGVEGALLAEGTT--KATFQYRALSRLTGRGLLTDWGESWKEAR 91
Query: 133 KTASFEFASKNLRDFSTKVFREYSLKLSSILTQASCHNQEIDMQELLMRMTLDSICKVGF 192
K F KN+R + + E +E D+ ++ ++L + + F
Sbjct: 92 KALKDPFLPKNVRGYREAMEEEARAFF------GEWRGEERDLDHEMLALSLRLLGRALF 145
Query: 193 GVEIGTLAPNLPDNRFAQAFDTANIIVTLRFIDPLWKIKRFLHLGSEALLDKSIKVIDDF 252
G + S +L + ++K +D
Sbjct: 146 GKPL-----------------------------------------SPSLAEHALKALDRI 164
Query: 253 TYSVIKRRKAEIQEARETSDGTKIKYDILTRFIE--LSEDPESNLTDKSLRDVVLNFVIA 310
+ + R + L R E + P S+L + + ++A
Sbjct: 165 ---MAQTRSPLALLDLAAEARFRKDRGALYREAEALIVHPPLSHLPRERALSEAVTLLVA 221
Query: 311 GRDTTATTLTWGVYMAMTHNHVAEKLYSELKAFEADRAKEEKASLVQYDKEDLESFNQRV 370
G +T A+ LTW ++ ++H + +RV
Sbjct: 222 GHETVASALTWS-FLLLSHR---------------------------------PDWQKRV 247
Query: 371 TQFAGLLNYDSMGKLYYLHAVITETLRLYPAVPQDPKGI----LEDDVLPDGTKVKAGGM 426
+ A E LRLYP P I LE +L ++ G
Sbjct: 248 AE-----------SEEAALAAFQEALRLYP-----PAWILTRRLERPLLLGEDRLPPGTT 291
Query: 427 VTYVPYSMGRMEYNWGPDAASFKPERWLKDGVFQNASPFKFTAFQAGPRICLGKDSAYLQ 486
+ PY R+ + PD +F+PER+L++ + ++ F G R+CLG+D A L+
Sbjct: 292 LVLSPYVTQRLHF---PDGEAFRPERFLEE---RGTPSGRYFPFGLGQRLCLGRDFALLE 345
Query: 487 MKMALAILCRFFKFKLVP 504
+ L R F+ +P
Sbjct: 346 GPIVLRAFFRRFRLDPLP 363
>pdb|3IBD|A Chain A, Crystal Structure Of A Cytochrome P450 2b6 Genetic Variant
In Complex With The Inhibitor
4-(4-Chlorophenyl)imidazole
pdb|3QOA|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-Benzylpyridine.
pdb|3QU8|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|B Chain B, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|C Chain C, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|D Chain D, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|E Chain E, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|F Chain F, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3UA5|A Chain A, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
pdb|3UA5|B Chain B, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
Length = 476
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 87/406 (21%), Positives = 152/406 (37%), Gaps = 82/406 (20%)
Query: 117 GDGIFNVDGELWRKQRKTASFEFASKNLRDFSTKVFREYSLKLSS----ILTQASCHNQE 172
G G+ +G W K LR FS R++ + S I +A C +E
Sbjct: 91 GYGVIFANGNRW-------------KVLRRFSVTTMRDFGMGKRSVEERIQEEAQCLIEE 137
Query: 173 I--------DMQELLMRMTLDSICKVGFGVEIGTLAPNLPD--NRFAQAFDTANIIVTLR 222
+ D L +T + IC + FG N F Q F + +
Sbjct: 138 LRKSKGALMDPTFLFQSITANIICSIVFGKRFHYQDQEFLKMLNLFYQTFSLISSVFGQL 197
Query: 223 FIDPLWKIKRFLHLGSEALLDKSIKVIDDFTYSVIKRRKAEIQEARETSDGTKIKYDILT 282
F +K F G+ + K+++ I+ + +++ RET D + + I T
Sbjct: 198 FELFSGFLKHFP--GAHRQVYKNLQEINAYI-------GHSVEKHRETLDPSAPRDLIDT 248
Query: 283 RFIELSED---PESNLTDKSLRDVVLNFVIAGRDTTATTLTWGVYMAMTHNHVAEKLYSE 339
+ + ++ S + ++L L+ AG +TT+TTL +G + + + HVAE++Y E
Sbjct: 249 YLLHMEKEKSNAHSEFSHQNLNLNTLSLFFAGTETTSTTLRYGFLLMLKYPHVAERVYRE 308
Query: 340 LKAFEADRAKEEKASLVQYDKEDLESFNQRVTQFAGLLNYDSMGKLYYLHAVITETLRLY 399
++ E +D+ K+ Y AVI E R
Sbjct: 309 IEQVIGPHRPPE-----LHDR----------------------AKMPYTEAVIYEIQRFS 341
Query: 400 PAVPQDPKGILEDD------VLPDGTKVKAGGMVTYVPYSMGRMEYNWGPDAASFKPERW 453
+P I+ ++P T+V + ++ Y PDA F P+ +
Sbjct: 342 DLLPMGVPHIVTQHTSFRGYIIPKDTEV-----FLILSTALHDPHYFEKPDA--FNPDHF 394
Query: 454 L-KDGVFQNASPFKFTAFQAGPRICLGKDSAYLQMKMALAILCRFF 498
L +G + F F G RICLG+ A ++ + + + F
Sbjct: 395 LDANGALKKTE--AFIPFSLGKRICLGEGIARAELFLFFTTILQNF 438
>pdb|1PQ2|A Chain A, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|1PQ2|B Chain B, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|2NNH|A Chain A, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNH|B Chain B, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNI|A Chain A, Cyp2c8dh Complexed With Montelukast
pdb|2NNJ|A Chain A, Cyp2c8dh Complexed With Felodipine
pdb|2VN0|A Chain A, Cyp2c8dh Complexed With Troglitazone
Length = 476
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 95/423 (22%), Positives = 161/423 (38%), Gaps = 64/423 (15%)
Query: 108 YHSYMEVLLGDGI-FNVDGELWRKQRKTASFEFASKN------LRDFSTKVFREYSLKLS 160
Y + E L+ +G F+ G QR T S N +R FS R + +
Sbjct: 62 YEAVKEALIDNGEEFSGRGNSPISQRITKGLGIISSNGKRWKEIRRFSLTTLRNFGMGKR 121
Query: 161 SI----LTQASCHNQEI--------DMQELLMRMTLDSICKVGFGVEIGTLAPNLPD--N 206
SI +A C +E+ D +L + IC V F N
Sbjct: 122 SIEDRVQEEAHCLVEELRKTKASPCDPTFILGCAPCNVICSVVFQKRFDYKDQNFLTLMK 181
Query: 207 RFAQAFDTANIIVTLRFIDPLWKIKRFLHLGSEALLDKSIKVIDD--FTYSVIKRRKAEI 264
RF + F N P ++ L + KV+ + T S I+ + E
Sbjct: 182 RFNENFRILN--------SPWIQVCNNFPLLIDCFPGTHNKVLKNVALTRSYIREKVKEH 233
Query: 265 QEARETSDGTKIKYDILTRFIELSEDPESNLTDKSLRDVVLNFVIAGRDTTATTLTWGVY 324
Q + + ++ L + + ++ +S ++L V + +AG +TT+TTL +G+
Sbjct: 234 QASLDVNNPRDFIDCFLIKMEQEKDNQKSEFNIENLVGTVADLFVAGTETTSTTLRYGLL 293
Query: 325 MAMTHNHVAEKLYSELKAFEADRAKEEKASLVQYDKEDLESFNQRVTQFAGLLNYDSMGK 384
+ + H V K+ E+ D S D+ + + V + + Y +
Sbjct: 294 LLLKHPEVTAKVQEEI-----DHVIGRHRSPCMQDRSHMPYTDAVVHE---IQRYSDLVP 345
Query: 385 LYYLHAVITET-LRLYPAVPQDPKGILEDDVLPDGTKVKAGGMVTYVPYSMGRMEYNWGP 443
HAV T+T R Y ++P GT + A ++T V + P
Sbjct: 346 TGVPHAVTTDTKFRNY--------------LIPKGTTIMA--LLTSVLHDDKEF-----P 384
Query: 444 DAASFKPERWL-KDGVFQNASPFKFTAFQAGPRICLGKDSAYLQMKMALAILCRFFKFKL 502
+ F P +L K+G F+ + F F AG RIC G+ A +++ + L + + F K
Sbjct: 385 NPNIFDPGHFLDKNGNFKKSD--YFMPFSAGKRICAGEGLARMELFLFLTTILQNFNLKS 442
Query: 503 VPD 505
V D
Sbjct: 443 VDD 445
>pdb|4I8V|A Chain A, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|B Chain B, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|C Chain C, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|D Chain D, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
Length = 491
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 95/238 (39%), Gaps = 31/238 (13%)
Query: 286 ELSEDPESNLTDKSLRDVVLNFVIAGRDTTATTLTWGVYMAMTHNHVAEKLYSELKAFEA 345
+L E+ L+D+ + ++VL+ AG DT T ++W + + + V K+ EL
Sbjct: 266 QLDENANVQLSDEKIINIVLDLFGAGFDTVTTAISWSLMYLVMNPRVQRKIQEELDTV-I 324
Query: 346 DRAKEEKASLVQYDKEDLESFNQRVTQFAGLLNYDSMGKLYYLHAVITETLRLYPAVP-Q 404
R++ + S D+ L Y+ A I ET R VP
Sbjct: 325 GRSRRPRLS----DRSHLP----------------------YMEAFILETFRHSSFVPFT 358
Query: 405 DPKGILEDDVLPDGTKVKAGGMVTYVPYSMGRMEYNWGPDAASFKPERWL-KDGVFQNAS 463
P D L G + G V + + + W + + F PER+L DG
Sbjct: 359 IPHSTTRDTSL-KGFYIPKGRCVFVNQWQINHDQKLW-VNPSEFLPERFLTPDGAIDKVL 416
Query: 464 PFKFTAFQAGPRICLGKDSAYLQMKMALAILCRFFKFKLVPDHPVKYRMMTILSMEHG 521
K F G R C+G+ A ++ + LAIL + +F + V + L+M+H
Sbjct: 417 SEKVIIFGMGKRKCIGETIARWEVFLFLAILLQRVEFSVPLGVKVDMTPIYGLTMKHA 474
>pdb|2PG6|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
Length = 476
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 110/505 (21%), Positives = 191/505 (37%), Gaps = 119/505 (23%)
Query: 39 GPKTWPFVGAAIEQLMNYDRMHDWLVNYLSELKTVVVPM---PFTTYTYIADPANVEHVL 95
GP PF+G ++ +N ++M++ L+ +SE V + P A E ++
Sbjct: 14 GPTPLPFIGNYLQ--LNTEQMYNSLMK-ISERYGPVFTIHLGPRRVVVLCGHDAVREALV 70
Query: 96 KTNFANYPKGETYHSYMEVLLGDGIFNVDGELWRKQRKTASFEFASKNLRDFSTKVFREY 155
+GE ++ V G G+ +GE +K LR FS R++
Sbjct: 71 DQAEEFSGRGEQA-TFDWVFKGYGVVFSNGE-------------RAKQLRRFSIATLRDF 116
Query: 156 SLKLSSILTQASCHNQEIDMQELLMRMTLDSICKVGFGVEI--GTLAPNLPDNRFAQAFD 213
+ I E +QE + GF ++ GT N+ D F +
Sbjct: 117 GVGKRGI---------EERIQE-----------EAGFLIDALRGTGGANI-DPTFFLSRT 155
Query: 214 TANIIVTLRFIDPL-WKIKRFLHL-----GSEALLDKSIKVIDDFTYSVIKRRKAEIQEA 267
+N+I ++ F D +K K FL L G S + + SV+K Q+A
Sbjct: 156 VSNVISSIVFGDRFDYKDKEFLSLLRMMLGIFQFTSTSTGQLYEMFSSVMKHLPGPQQQA 215
Query: 268 RETSDG------TKIKYD---------------ILTRFIELSEDPESNLTDKSLRDVVLN 306
+ G K++++ L R E ++P + K+L L
Sbjct: 216 FQCLQGLEDFIAKKVEHNQRTLDPNSPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLQ 275
Query: 307 FVIAGRDTTATTLTWGVYMAMTHNHVAEKLYSELKAFEADRAKEEKASLVQYDKEDLESF 366
I G +T +TTL +G + M H V K++ E+ DR ++ +++
Sbjct: 276 LFIGGTETVSTTLRYGFLLLMKHPEVEAKVHEEI-----DR-------VIGKNRQP---- 319
Query: 367 NQRVTQFAGLLNYDSMGKLYYLHAVITETLRLYPAVP--------QDPKGILEDDVLPDG 418
++ K+ Y+ AVI E R +P +D K D LP G
Sbjct: 320 -----------KFEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTK--FRDFFLPKG 366
Query: 419 TKVKAG-GMVTYVPYSMGRMEYNWGPDAASFKPERWLKD-GVFQNASPFKFTAFQAGPRI 476
T+V G V P ++ + F P+ +L + G F+ + F F G R
Sbjct: 367 TEVYPMLGSVLRDP--------SFFSNPQDFNPQHFLNEKGQFKKSD--AFVPFSIGKRN 416
Query: 477 CLGKDSAYLQMKMALAILCRFFKFK 501
C G+ A +++ + + + F+ K
Sbjct: 417 CFGEGLARMELFLFFTTVMQNFRLK 441
>pdb|2PG5|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297q
Length = 476
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 110/505 (21%), Positives = 191/505 (37%), Gaps = 119/505 (23%)
Query: 39 GPKTWPFVGAAIEQLMNYDRMHDWLVNYLSELKTVVVPM---PFTTYTYIADPANVEHVL 95
GP PF+G ++ +N ++M++ L+ +SE V + P A E ++
Sbjct: 14 GPTPLPFIGNYLQ--LNTEQMYNSLMK-ISERYGPVFTIHLGPRRVVVLCGHDAVREALV 70
Query: 96 KTNFANYPKGETYHSYMEVLLGDGIFNVDGELWRKQRKTASFEFASKNLRDFSTKVFREY 155
+GE ++ V G G+ +GE +K LR FS R++
Sbjct: 71 DQAEEFSGRGEQA-TFDWVFKGYGVVFSNGE-------------RAKQLRRFSIATLRDF 116
Query: 156 SLKLSSILTQASCHNQEIDMQELLMRMTLDSICKVGFGVEI--GTLAPNLPDNRFAQAFD 213
+ I E +QE + GF ++ GT N+ D F +
Sbjct: 117 GVGKRGI---------EERIQE-----------EAGFLIDALRGTGGANI-DPTFFLSRT 155
Query: 214 TANIIVTLRFIDPL-WKIKRFLHL-----GSEALLDKSIKVIDDFTYSVIKRRKAEIQEA 267
+N+I ++ F D +K K FL L G S + + SV+K Q+A
Sbjct: 156 VSNVISSIVFGDRFDYKDKEFLSLLRMMLGIFQFTSTSTGQLYEMFSSVMKHLPGPQQQA 215
Query: 268 RETSDG------TKIKYD---------------ILTRFIELSEDPESNLTDKSLRDVVLN 306
+ G K++++ L R E ++P + K+L L
Sbjct: 216 FQLLQGLEDFIAKKVEHNQRTLDPNSPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLQ 275
Query: 307 FVIAGRDTTATTLTWGVYMAMTHNHVAEKLYSELKAFEADRAKEEKASLVQYDKEDLESF 366
I G +T +TTL +G + M H V K++ E+ DR ++ +++
Sbjct: 276 LFIGGTETVSTTLRYGFLLLMKHPEVEAKVHEEI-----DR-------VIGKNRQP---- 319
Query: 367 NQRVTQFAGLLNYDSMGKLYYLHAVITETLRLYPAVP--------QDPKGILEDDVLPDG 418
++ K+ Y+ AVI E R +P +D K D LP G
Sbjct: 320 -----------KFEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTK--FRDFFLPKG 366
Query: 419 TKVKAG-GMVTYVPYSMGRMEYNWGPDAASFKPERWLKD-GVFQNASPFKFTAFQAGPRI 476
T+V G V P ++ + F P+ +L + G F+ + F F G R
Sbjct: 367 TEVYPMLGSVLRDP--------SFFSNPQDFNPQHFLNEKGQFKKSD--AFVPFSIGKRN 416
Query: 477 CLGKDSAYLQMKMALAILCRFFKFK 501
C G+ A +++ + + + F+ K
Sbjct: 417 CFGEGLARMELFLFFTTVMQNFRLK 441
>pdb|1PO5|A Chain A, Structure Of Mammalian Cytochrome P450 2b4
Length = 476
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 87/405 (21%), Positives = 154/405 (38%), Gaps = 74/405 (18%)
Query: 114 VLLGDGIFNVDGELWRKQRKTASFEFASKNLRDFSTKVFREYSLKLSSILTQASCHNQEI 173
+ G G+ +GE WR R+ F+ +RDF + S++ I +A C +E+
Sbjct: 88 IFQGYGVIFANGERWRALRR-----FSLATMRDFGMG---KRSVE-ERIQEEARCLVEEL 138
Query: 174 --------DMQELLMRMTLDSICKVGFGVEIGTLAPNLPDNRFAQAFDTANIIVTLRFID 225
D L +T + IC + FG + D F + D +L
Sbjct: 139 RKSKGALLDNTLLFHSITSNIICSIVFGKRF-----DYKDPVFLRLLDLFFQSFSLISSF 193
Query: 226 PLWKIKRFLHL-----GSEALLDKSIKVIDDFTYSVIKRRKAEIQEARETSDGTKIKYDI 280
+ F G+ + ++++ I+ F +++ +A + + S+
Sbjct: 194 SSQVFELFSGFLKHFPGTHRQIYRNLQEINTFIGQSVEKHRATL----DPSNPRDFIDVY 249
Query: 281 LTRFIELSEDPESNLTDKSLRDVVLNFVIAGRDTTATTLTWGVYMAMTHNHVAEKLYSEL 340
L R + DP S ++L VL+ AG +TT+TTL +G + + + HV E++ E+
Sbjct: 250 LLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEI 309
Query: 341 KAFEADRAKEEKASLVQYDKEDLESFNQRVTQFAGLLNYDSMGKLYYLHAVITETLRLYP 400
E +L D K+ Y AVI E RL
Sbjct: 310 ---EQVIGSHRPPAL------------------------DDRAKMPYTDAVIHEIQRLGD 342
Query: 401 AVPQD-PKGILEDD-----VLPDGTKVKAGGMVTYVPYSMGRMEYNWGPDAASFKPERWL 454
+P P + +D V+P T+V + ++ Y P+ +F P +L
Sbjct: 343 LIPFGVPHTVTKDTQFRGYVIPKNTEV-----FPVLSSALHDPRYFETPN--TFNPGHFL 395
Query: 455 -KDGVFQNASPFKFTAFQAGPRICLGKDSAYLQMKMALAILCRFF 498
+G + F F G RICLG+ A ++ + + + F
Sbjct: 396 DANGALKRNE--GFMPFSLGKRICLGEGIARTELFLFFTTILQNF 438
>pdb|1SUO|A Chain A, Structure Of Mammalian Cytochrome P450 2b4 With Bound
4-(4- Chlorophenyl)imidazole
pdb|2BDM|A Chain A, Structure Of Cytochrome P450 2b4 With Bound Bifonazole
pdb|3G5N|A Chain A, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|B Chain B, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|C Chain C, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|D Chain D, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|A Chain A, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|B Chain B, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|C Chain C, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|D Chain D, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3KW4|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Ticlopidine
pdb|3ME6|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|B Chain B, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|C Chain C, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|D Chain D, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3MVR|A Chain A, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3MVR|B Chain B, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3R1A|A Chain A, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|B Chain B, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|C Chain C, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|D Chain D, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|E Chain E, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|F Chain F, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|G Chain G, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|H Chain H, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|A Chain A, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|B Chain B, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|C Chain C, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|D Chain D, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3TMZ|A Chain A, Crystal Structure Of P450 2b4(H226y) In Complex With
Amlodipine
pdb|3UAS|A Chain A, Cytochrome P450 2b4 Covalently Bound To The
Mechanism-based Inactivator 9-ethynylphenanthrene
Length = 476
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 87/405 (21%), Positives = 154/405 (38%), Gaps = 74/405 (18%)
Query: 114 VLLGDGIFNVDGELWRKQRKTASFEFASKNLRDFSTKVFREYSLKLSSILTQASCHNQEI 173
+ G G+ +GE WR R+ F+ +RDF + S++ I +A C +E+
Sbjct: 88 IFQGYGVIFANGERWRALRR-----FSLATMRDFGMG---KRSVE-ERIQEEARCLVEEL 138
Query: 174 --------DMQELLMRMTLDSICKVGFGVEIGTLAPNLPDNRFAQAFDTANIIVTLRFID 225
D L +T + IC + FG + D F + D +L
Sbjct: 139 RKSKGALLDNTLLFHSITSNIICSIVFGKRF-----DYKDPVFLRLLDLFFQSFSLISSF 193
Query: 226 PLWKIKRFLHL-----GSEALLDKSIKVIDDFTYSVIKRRKAEIQEARETSDGTKIKYDI 280
+ F G+ + ++++ I+ F +++ +A + + S+
Sbjct: 194 SSQVFELFSGFLKYFPGTHRQIYRNLQEINTFIGQSVEKHRATL----DPSNPRDFIDVY 249
Query: 281 LTRFIELSEDPESNLTDKSLRDVVLNFVIAGRDTTATTLTWGVYMAMTHNHVAEKLYSEL 340
L R + DP S ++L VL+ AG +TT+TTL +G + + + HV E++ E+
Sbjct: 250 LLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEI 309
Query: 341 KAFEADRAKEEKASLVQYDKEDLESFNQRVTQFAGLLNYDSMGKLYYLHAVITETLRLYP 400
E +L D K+ Y AVI E RL
Sbjct: 310 ---EQVIGSHRPPAL------------------------DDRAKMPYTDAVIHEIQRLGD 342
Query: 401 AVPQD-PKGILEDD-----VLPDGTKVKAGGMVTYVPYSMGRMEYNWGPDAASFKPERWL 454
+P P + +D V+P T+V + ++ Y P+ +F P +L
Sbjct: 343 LIPFGVPHTVTKDTQFRGYVIPKNTEV-----FPVLSSALHDPRYFETPN--TFNPGHFL 395
Query: 455 -KDGVFQNASPFKFTAFQAGPRICLGKDSAYLQMKMALAILCRFF 498
+G + F F G RICLG+ A ++ + + + F
Sbjct: 396 DANGALKRNE--GFMPFSLGKRICLGEGIARTELFLFFTTILQNF 438
>pdb|2PG7|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
Length = 476
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 109/505 (21%), Positives = 191/505 (37%), Gaps = 119/505 (23%)
Query: 39 GPKTWPFVGAAIEQLMNYDRMHDWLVNYLSELKTVVVPM---PFTTYTYIADPANVEHVL 95
GP PF+G ++ +N ++M++ L+ +SE V + P A E ++
Sbjct: 14 GPTPLPFIGNYLQ--LNTEQMYNSLMK-ISERYGPVFTIHLGPRRVVVLCGHDAVREALV 70
Query: 96 KTNFANYPKGETYHSYMEVLLGDGIFNVDGELWRKQRKTASFEFASKNLRDFSTKVFREY 155
+GE ++ V G G+ +GE +K LR FS R++
Sbjct: 71 DQAEEFSGRGEQA-TFDWVFKGYGVVFSNGE-------------RAKQLRRFSIATLRDF 116
Query: 156 SLKLSSILTQASCHNQEIDMQELLMRMTLDSICKVGFGVEI--GTLAPNLPDNRFAQAFD 213
+ I E +QE + GF ++ GT N+ D F +
Sbjct: 117 GVGKRGI---------EERIQE-----------EAGFLIDALRGTGGANI-DPTFFLSRT 155
Query: 214 TANIIVTLRFIDPL-WKIKRFLHL-----GSEALLDKSIKVIDDFTYSVIKRRKAEIQEA 267
+N+I ++ F D +K K FL L G S + + SV+K Q+A
Sbjct: 156 VSNVISSIVFGDRFDYKDKEFLSLLRMMLGIFQFTSTSTGQLYEMFSSVMKHLPGPQQQA 215
Query: 268 RETSDG------TKIKYD---------------ILTRFIELSEDPESNLTDKSLRDVVLN 306
+ G K++++ L R E ++P + K+L L
Sbjct: 216 FQLLQGLEDFIAKKVEHNQRTLDPNSPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLQ 275
Query: 307 FVIAGRDTTATTLTWGVYMAMTHNHVAEKLYSELKAFEADRAKEEKASLVQYDKEDLESF 366
+ G +T +TTL +G + M H V K++ E+ DR ++ +++
Sbjct: 276 LFVGGTETVSTTLRYGFLLLMKHPEVEAKVHEEI-----DR-------VIGKNRQP---- 319
Query: 367 NQRVTQFAGLLNYDSMGKLYYLHAVITETLRLYPAVP--------QDPKGILEDDVLPDG 418
++ K+ Y+ AVI E R +P +D K D LP G
Sbjct: 320 -----------KFEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTK--FRDFFLPKG 366
Query: 419 TKVKAG-GMVTYVPYSMGRMEYNWGPDAASFKPERWLKD-GVFQNASPFKFTAFQAGPRI 476
T+V G V P ++ + F P+ +L + G F+ + F F G R
Sbjct: 367 TEVYPMLGSVLRDP--------SFFSNPQDFNPQHFLNEKGQFKKSD--AFVPFSIGKRN 416
Query: 477 CLGKDSAYLQMKMALAILCRFFKFK 501
C G+ A +++ + + + F+ K
Sbjct: 417 CFGEGLARMELFLFFTTVMQNFRLK 441
>pdb|2Q6N|A Chain A, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|B Chain B, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|C Chain C, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|D Chain D, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|E Chain E, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|F Chain F, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|G Chain G, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
Length = 478
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 87/405 (21%), Positives = 154/405 (38%), Gaps = 74/405 (18%)
Query: 114 VLLGDGIFNVDGELWRKQRKTASFEFASKNLRDFSTKVFREYSLKLSSILTQASCHNQEI 173
+ G G+ +GE WR R+ F+ +RDF + S++ I +A C +E+
Sbjct: 88 IFQGYGVIFANGERWRALRR-----FSLATMRDFGMG---KRSVE-ERIQEEARCLVEEL 138
Query: 174 --------DMQELLMRMTLDSICKVGFGVEIGTLAPNLPDNRFAQAFDTANIIVTLRFID 225
D L +T + IC + FG + D F + D +L
Sbjct: 139 RKSKGALLDNTLLFHSITSNIICSIVFGKRF-----DYKDPVFLRLLDLFFQSFSLISSF 193
Query: 226 PLWKIKRFLHL-----GSEALLDKSIKVIDDFTYSVIKRRKAEIQEARETSDGTKIKYDI 280
+ F G+ + ++++ I+ F +++ +A + + S+
Sbjct: 194 SSQVFELFSGFLKYFPGTHRQIYRNLQEINTFIGQSVEKHRATL----DPSNPRDFIDVY 249
Query: 281 LTRFIELSEDPESNLTDKSLRDVVLNFVIAGRDTTATTLTWGVYMAMTHNHVAEKLYSEL 340
L R + DP S ++L VL+ AG +TT+TTL +G + + + HV E++ E+
Sbjct: 250 LLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEI 309
Query: 341 KAFEADRAKEEKASLVQYDKEDLESFNQRVTQFAGLLNYDSMGKLYYLHAVITETLRLYP 400
E +L D K+ Y AVI E RL
Sbjct: 310 ---EQVIGSHRPPAL------------------------DDRAKMPYTDAVIHEIQRLGD 342
Query: 401 AVPQD-PKGILEDD-----VLPDGTKVKAGGMVTYVPYSMGRMEYNWGPDAASFKPERWL 454
+P P + +D V+P T+V + ++ Y P+ +F P +L
Sbjct: 343 LIPFGVPHTVTKDTQFRGYVIPKNTEV-----FPVLSSALHDPRYFETPN--TFNPGHFL 395
Query: 455 -KDGVFQNASPFKFTAFQAGPRICLGKDSAYLQMKMALAILCRFF 498
+G + F F G RICLG+ A ++ + + + F
Sbjct: 396 DANGALKRNE--GFMPFSLGKRICLGEGIARTELFLFFTTILQNF 438
>pdb|4H1N|A Chain A, Crystal Structure Of P450 2b4 F297a Mutant In Complex With
Anti- Platelet Drug Clopidogrel
Length = 479
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 87/405 (21%), Positives = 154/405 (38%), Gaps = 74/405 (18%)
Query: 114 VLLGDGIFNVDGELWRKQRKTASFEFASKNLRDFSTKVFREYSLKLSSILTQASCHNQEI 173
+ G G+ +GE WR R+ F+ +RDF + S++ I +A C +E+
Sbjct: 88 IFQGYGVIFANGERWRALRR-----FSLATMRDFGMG---KRSVE-ERIQEEARCLVEEL 138
Query: 174 --------DMQELLMRMTLDSICKVGFGVEIGTLAPNLPDNRFAQAFDTANIIVTLRFID 225
D L +T + IC + FG + D F + D +L
Sbjct: 139 RKSKGALLDNTLLFHSITSNIICSIVFGKRF-----DYKDPVFLRLLDLFFQSFSLISSF 193
Query: 226 PLWKIKRFLHL-----GSEALLDKSIKVIDDFTYSVIKRRKAEIQEARETSDGTKIKYDI 280
+ F G+ + ++++ I+ F +++ +A + + S+
Sbjct: 194 SSQVFELFSGFLKYFPGTHRQIYRNLQEINTFIGQSVEKHRATL----DPSNPRDFIDVY 249
Query: 281 LTRFIELSEDPESNLTDKSLRDVVLNFVIAGRDTTATTLTWGVYMAMTHNHVAEKLYSEL 340
L R + DP S ++L VL+ AG +TT+TTL +G + + + HV E++ E+
Sbjct: 250 LLRMEKDKSDPSSEFHHQNLILTVLSLFAAGTETTSTTLRYGFLLMLKYPHVTERVQKEI 309
Query: 341 KAFEADRAKEEKASLVQYDKEDLESFNQRVTQFAGLLNYDSMGKLYYLHAVITETLRLYP 400
E +L D K+ Y AVI E RL
Sbjct: 310 ---EQVIGSHRPPAL------------------------DDRAKMPYTDAVIHEIQRLGD 342
Query: 401 AVPQD-PKGILEDD-----VLPDGTKVKAGGMVTYVPYSMGRMEYNWGPDAASFKPERWL 454
+P P + +D V+P T+V + ++ Y P+ +F P +L
Sbjct: 343 LIPFGVPHTVTKDTQFRGYVIPKNTEV-----FPVLSSALHDPRYFETPN--TFNPGHFL 395
Query: 455 -KDGVFQNASPFKFTAFQAGPRICLGKDSAYLQMKMALAILCRFF 498
+G + F F G RICLG+ A ++ + + + F
Sbjct: 396 DANGALKRNE--GFMPFSLGKRICLGEGIARTELFLFFTTILQNF 438
>pdb|3TK3|A Chain A, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|B Chain B, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|C Chain C, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|D Chain D, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
Length = 476
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 86/405 (21%), Positives = 153/405 (37%), Gaps = 74/405 (18%)
Query: 114 VLLGDGIFNVDGELWRKQRKTASFEFASKNLRDFSTKVFREYSLKLSSILTQASCHNQEI 173
+ G G+ +GE WR R+ F+ +RDF + S++ I +A C +E+
Sbjct: 88 IFQGYGVIFANGERWRALRR-----FSLATMRDFGMG---KRSVE-ERIQEEARCLVEEL 138
Query: 174 --------DMQELLMRMTLDSICKVGFGVEIGTLAPNLPDNRFAQAFDTANIIVTLRFID 225
D L +T + IC + FG + D F + D +L
Sbjct: 139 RKSKGALLDNTLLFHSITSNIICSIVFGKRF-----DYKDPVFLRLLDLFFQSFSLISSF 193
Query: 226 PLWKIKRFLHL-----GSEALLDKSIKVIDDFTYSVIKRRKAEIQEARETSDGTKIKYDI 280
+ F G+ + ++++ I+ F +++ +A + + S+
Sbjct: 194 SSQVFELFSGFLKYFPGTHRQIYRNLQEINTFIGQSVEKHRATL----DPSNPRDFIDVY 249
Query: 281 LTRFIELSEDPESNLTDKSLRDVVLNFVIAGRDTTATTLTWGVYMAMTHNHVAEKLYSEL 340
L R + DP S ++L VL+ AG +TT+TTL +G + + + HV E++ E+
Sbjct: 250 LLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEI 309
Query: 341 KAFEADRAKEEKASLVQYDKEDLESFNQRVTQFAGLLNYDSMGKLYYLHAVITETLRLYP 400
E +L D K+ Y AVI E RL
Sbjct: 310 ---EQVIGSHRPPAL------------------------DDRAKMPYTDAVIHEIQRLGD 342
Query: 401 AVPQD-PKGILEDD-----VLPDGTKVKAGGMVTYVPYSMGRMEYNWGPDAASFKPERWL 454
+P P + +D V+P T+V + ++ Y P+ +F P +L
Sbjct: 343 LIPFGVPHTVTKDTQFRGYVIPKNTEV-----FPVLSSALHDPRYFETPN--TFNPGHFL 395
Query: 455 -KDGVFQNASPFKFTAFQAGPRICLGKDSAYLQMKMALAILCRFF 498
+G + F F G RIC G+ A ++ + + + F
Sbjct: 396 DANGALKRNE--GFMPFSLGKRICAGEGIARTELFLFFTTILQNF 438
>pdb|1EA1|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With Fluconazole
pdb|1E9X|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With 4-
Phenylimidazole
pdb|1H5Z|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Ferric Low-Spin State
Length = 455
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 70/346 (20%), Positives = 131/346 (37%), Gaps = 57/346 (16%)
Query: 172 EIDMQELLMRMTL--DSICKVGFGVEIGTLAPNLPDNRFAQAFDTANIIVTLRFIDPLWK 229
EID+ + +T+ S C +G + D RFA+ + R DPL
Sbjct: 133 EIDLLDFFAELTIYTSSACLIGKKFR------DQLDGRFAKLYHELE-----RGTDPLAY 181
Query: 230 IKRFLHLGSEALLDKSIKVIDDFTYSVIKRRKAEIQEARETSDGTKIKYDILTRFIEL-S 288
+ +L + S D++ + ++ R A K D+L I + +
Sbjct: 182 VDPYLPIESFRRRDEARNGLVALVADIMNGRIA-------NPPTDKSDRDMLDVLIAVKA 234
Query: 289 EDPESNLTDKSLRDVVLNFVIAGRDTTATTLTWGVYMAMTHNHVAEKLYSELKAFEADRA 348
E + + + ++ + AG T++ T +W + M H + EL D
Sbjct: 235 ETGTPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGDGR 294
Query: 349 KEEKASLVQYDKEDLESFNQRVTQFAGLLNYDSMGKLYYLHAVITETLRLYPAVP---QD 405
+++ ++ ++ L V+ ETLRL+P + +
Sbjct: 295 S---------------------------VSFHALRQIPQLENVLKETLRLHPPLIILMRV 327
Query: 406 PKGILEDDVLPDGTKVKAGGMVTYVPYSMGRMEYNWGPDAASFKPERWLKDGVFQNASPF 465
KG E G ++ G +V P R+ ++ PD F P R+ + + +
Sbjct: 328 AKGEFE----VQGHRIHEGDLVAASPAISNRIPEDF-PDPHDFVPARYEQPRQEDLLNRW 382
Query: 466 KFTAFQAGPRICLGKDSAYLQMKMALAILCRFFKFKLVPDHPVKYR 511
+ F AG C+G A +Q+K ++L R ++F++ P YR
Sbjct: 383 TWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEFEMA-QPPESYR 427
>pdb|1X8V|A Chain A, Estriol-Bound And Ligand-Free Structures Of Sterol
14alpha- Demethylase (Cyp51)
pdb|2BZ9|A Chain A, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2BZ9|B Chain B, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2CI0|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2CIB|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2VKU|A Chain A, 4,4'-Dihydroxybenzophenone Mimics Sterol Substrate In The
Binding Site Of Sterol 14alpha-Demethylase (Cyp51) In
The X-Ray Structure Of The Complex
pdb|2W09|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor Cis-4-
Methyl-N-[(1s)-3-(Methylsulfanyl)-1-(Pyridin-4-
Ylcarbamoyl)propyl]cyclohexanecarboxamide
pdb|2W0B|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor 3-{[(4-
Methylphenyl)sulfonyl]amino}propyl Pyridin-4-Ylcarbamate
Length = 455
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 70/346 (20%), Positives = 131/346 (37%), Gaps = 57/346 (16%)
Query: 172 EIDMQELLMRMTL--DSICKVGFGVEIGTLAPNLPDNRFAQAFDTANIIVTLRFIDPLWK 229
EID+ + +T+ S C +G + D RFA+ + R DPL
Sbjct: 133 EIDLLDFFAELTIYTSSACLIGKKFR------DQLDGRFAKLYHELE-----RGTDPLAY 181
Query: 230 IKRFLHLGSEALLDKSIKVIDDFTYSVIKRRKAEIQEARETSDGTKIKYDILTRFIEL-S 288
+ +L + S D++ + ++ R A K D+L I + +
Sbjct: 182 VDPYLPIESFRRRDEARNGLVALVADIMNGRIA-------NPPTDKSDRDMLDVLIAVKA 234
Query: 289 EDPESNLTDKSLRDVVLNFVIAGRDTTATTLTWGVYMAMTHNHVAEKLYSELKAFEADRA 348
E + + + ++ + AG T++ T +W + M H + EL D
Sbjct: 235 ETGTPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGDGR 294
Query: 349 KEEKASLVQYDKEDLESFNQRVTQFAGLLNYDSMGKLYYLHAVITETLRLYPAVP---QD 405
+++ ++ ++ L V+ ETLRL+P + +
Sbjct: 295 S---------------------------VSFHALRQIPQLENVLKETLRLHPPLIILMRV 327
Query: 406 PKGILEDDVLPDGTKVKAGGMVTYVPYSMGRMEYNWGPDAASFKPERWLKDGVFQNASPF 465
KG E G ++ G +V P R+ ++ PD F P R+ + + +
Sbjct: 328 AKGEFE----VQGHRIHEGDLVAASPAISNRIPEDF-PDPHDFVPARYEQPRQEDLLNRW 382
Query: 466 KFTAFQAGPRICLGKDSAYLQMKMALAILCRFFKFKLVPDHPVKYR 511
+ F AG C+G A +Q+K ++L R ++F++ P YR
Sbjct: 383 TWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEFEMA-QPPESYR 427
>pdb|2W0A|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor
N-[(1s)-2-Methyl-1-(Pyridin-4-Ylcarbamoyl)propyl]
Cyclohexanecarboxamide
Length = 455
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 70/346 (20%), Positives = 131/346 (37%), Gaps = 57/346 (16%)
Query: 172 EIDMQELLMRMTL--DSICKVGFGVEIGTLAPNLPDNRFAQAFDTANIIVTLRFIDPLWK 229
EID+ + +T+ S C +G + D RFA+ + R DPL
Sbjct: 133 EIDLLDFFAELTIYTSSACLIGKKFR------DQLDGRFAKLYHELE-----RGTDPLAY 181
Query: 230 IKRFLHLGSEALLDKSIKVIDDFTYSVIKRRKAEIQEARETSDGTKIKYDILTRFIEL-S 288
+ +L + S D++ + ++ R A K D+L I + +
Sbjct: 182 VDPYLPIESFRRRDEARNGLVALVADIMNGRIA-------NPPTDKSDRDMLDVLIAVKA 234
Query: 289 EDPESNLTDKSLRDVVLNFVIAGRDTTATTLTWGVYMAMTHNHVAEKLYSELKAFEADRA 348
E + + + ++ + AG T++ T +W + M H + EL D
Sbjct: 235 ETGTPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGDGR 294
Query: 349 KEEKASLVQYDKEDLESFNQRVTQFAGLLNYDSMGKLYYLHAVITETLRLYPAVP---QD 405
+++ ++ ++ L V+ ETLRL+P + +
Sbjct: 295 S---------------------------VSFHALRQIPQLENVLKETLRLHPPLIILMRV 327
Query: 406 PKGILEDDVLPDGTKVKAGGMVTYVPYSMGRMEYNWGPDAASFKPERWLKDGVFQNASPF 465
KG E G ++ G +V P R+ ++ PD F P R+ + + +
Sbjct: 328 AKGEFE----VQGHRIHEGDLVAASPAISNRIPEDF-PDPHDFVPARYEQPRQEDLLNRW 382
Query: 466 KFTAFQAGPRICLGKDSAYLQMKMALAILCRFFKFKLVPDHPVKYR 511
+ F AG C+G A +Q+K ++L R ++F++ P YR
Sbjct: 383 TWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEFEMA-QPPESYR 427
>pdb|1WIY|A Chain A, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
pdb|1WIY|B Chain B, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
Length = 389
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 54/116 (46%), Gaps = 17/116 (14%)
Query: 394 ETLRLYPAV-----PQDPKGILEDDVLPDGTKVKAGGMVTYVPYSMGRMEYNWGPDAASF 448
E LRLYP + +L +D LP GT + PY R+ + P+ +F
Sbjct: 260 EALRLYPPAWILTRRLERPLLLGEDRLPQGT------TLVLSPYVTQRLYF---PEGEAF 310
Query: 449 KPERWLKDGVFQNASPFKFTAFQAGPRICLGKDSAYLQMKMALAILCRFFKFKLVP 504
+PER+L + + ++ F G R+CLG+D A L+ + L R F+ +P
Sbjct: 311 QPERFLAE---RGTPSGRYFPFGLGQRLCLGRDFALLEGPIVLRAFFRRFRLDPLP 363
>pdb|4GQS|A Chain A, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|B Chain B, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|C Chain C, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|D Chain D, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
Length = 477
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 56/260 (21%), Positives = 102/260 (39%), Gaps = 41/260 (15%)
Query: 252 FTYSVIKRRKAEIQEARETSDGTKIKYDILTRFIELSEDPESNLTDKSLRDVVLNFVIAG 311
F S I + E QE+ + ++ L + + ++ +S T ++L + + AG
Sbjct: 222 FMESDILEKVKEHQESMDINNPRDFIDCFLIKMEKEKQNQQSEFTIENLVITAADLLGAG 281
Query: 312 RDTTATTLTWGVYMAMTHNHVAEKLYSELKAFEADRAKEEKASLVQYDKEDLESFNQRVT 371
+TT+TTL + + + + H V K+ E+ +R S D+
Sbjct: 282 TETTSTTLRYALLLLLKHPEVTAKVQEEI-----ERVVGRNRSPCMQDR----------- 325
Query: 372 QFAGLLNYDSMGKLYYLHAVITETLRLYPAVPQDPKGILEDDV------LPDGTKVKAGG 425
G + Y AV+ E R +P + DV +P GT +
Sbjct: 326 -----------GHMPYTDAVVHEVQRYIDLIPTSLPHAVTCDVKFRNYLIPKGTTI---- 370
Query: 426 MVTYVPYSMGRMEYNWGPDAASFKPERWLKDGVFQNASPFKFTAFQAGPRICLGKDSAYL 485
+ + E+ P+ F P +L +G S + F F AG RIC+G+ A +
Sbjct: 371 LTSLTSVLHDNKEF---PNPEMFDPRHFLDEGGNFKKSNY-FMPFSAGKRICVGEGLARM 426
Query: 486 QMKMALAILCRFFKFKLVPD 505
++ + L + + F K + D
Sbjct: 427 ELFLFLTFILQNFNLKSLID 446
>pdb|1R9O|A Chain A, Crystal Structure Of P4502c9 With Flurbiprofen Bound
Length = 477
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 56/260 (21%), Positives = 102/260 (39%), Gaps = 41/260 (15%)
Query: 252 FTYSVIKRRKAEIQEARETSDGTKIKYDILTRFIELSEDPESNLTDKSLRDVVLNFVIAG 311
F S I + E QE+ + ++ L + + + S T +SL + ++ AG
Sbjct: 222 FMKSYILEKVKEHQESMDMNNPQDFIDCFLMKMEKEKHNQPSEFTIESLENTAVDLFGAG 281
Query: 312 RDTTATTLTWGVYMAMTHNHVAEKLYSELKAFEADRAKEEKASLVQYDKEDLESFNQRVT 371
+TT+TTL + + + + H V K+ E+ +R S D+ +
Sbjct: 282 TETTSTTLRYALLLLLKHPEVTAKVQEEI-----ERVIGRNRSPCMQDRSHMP------- 329
Query: 372 QFAGLLNYDSMGKLYYLHAVITETLRLYPAVPQD-PKGILEDD-----VLPDGTKVKAGG 425
Y AV+ E R +P P + D ++P GT +
Sbjct: 330 ---------------YTDAVVHEVQRYIDLLPTSLPHAVTCDIKFRNYLIPKGTTI---- 370
Query: 426 MVTYVPYSMGRMEYNWGPDAASFKPERWLKDGVFQNASPFKFTAFQAGPRICLGKDSAYL 485
+++ E+ P+ F P +L +G S + F F AG RIC+G+ A +
Sbjct: 371 LISLTSVLHDNKEF---PNPEMFDPHHFLDEGGNFKKSKY-FMPFSAGKRICVGEALAGM 426
Query: 486 QMKMALAILCRFFKFKLVPD 505
++ + L + + F K + D
Sbjct: 427 ELFLFLTSILQNFNLKSLVD 446
>pdb|1OG2|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG2|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
Length = 475
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 56/260 (21%), Positives = 102/260 (39%), Gaps = 41/260 (15%)
Query: 252 FTYSVIKRRKAEIQEARETSDGTKIKYDILTRFIELSEDPESNLTDKSLRDVVLNFVIAG 311
F S I + E QE+ + ++ L + + + S T +SL + ++ AG
Sbjct: 220 FMKSYILEKVKEHQESMDMNNPQDFIDCFLMKMEKEKHNQPSEFTIESLENTAVDLFGAG 279
Query: 312 RDTTATTLTWGVYMAMTHNHVAEKLYSELKAFEADRAKEEKASLVQYDKEDLESFNQRVT 371
+TT+TTL + + + + H V K+ E+ +R S D+ +
Sbjct: 280 TETTSTTLRYALLLLLKHPEVTAKVQEEI-----ERVIGRNRSPCMQDRSHMP------- 327
Query: 372 QFAGLLNYDSMGKLYYLHAVITETLRLYPAVPQD-PKGILEDD-----VLPDGTKVKAGG 425
Y AV+ E R +P P + D ++P GT +
Sbjct: 328 ---------------YTDAVVHEVQRYIDLLPTSLPHAVTCDIKFRNYLIPKGTTI---- 368
Query: 426 MVTYVPYSMGRMEYNWGPDAASFKPERWLKDGVFQNASPFKFTAFQAGPRICLGKDSAYL 485
+++ E+ P+ F P +L +G S + F F AG RIC+G+ A +
Sbjct: 369 LISLTSVLHDNKEF---PNPEMFDPHHFLDEGGNFKKSKY-FMPFSAGKRICVGEALAGM 424
Query: 486 QMKMALAILCRFFKFKLVPD 505
++ + L + + F K + D
Sbjct: 425 ELFLFLTSILQNFNLKSLVD 444
>pdb|1U13|A Chain A, Crystal Structure Analysis Of The C37lC151TC442A-Triple
Mutant Of Cyp51 From Mycobacterium Tuberculosis
Length = 455
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/210 (21%), Positives = 84/210 (40%), Gaps = 36/210 (17%)
Query: 305 LNFVIAGRDTTATTLTWGVYMAMTHNHVAEKLYSELKAFEADRAKEEKASLVQYDKEDLE 364
++ + AG T++ T +W + M H + EL D
Sbjct: 251 ISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGDGRS--------------- 295
Query: 365 SFNQRVTQFAGLLNYDSMGKLYYLHAVITETLRLYPAVP---QDPKGILEDDVLPDGTKV 421
+++ ++ ++ L V+ ETLRL+P + + KG E G ++
Sbjct: 296 ------------VSFHALRQIPQLENVLKETLRLHPPLIILMRVAKGEFE----VQGHRI 339
Query: 422 KAGGMVTYVPYSMGRMEYNWGPDAASFKPERWLKDGVFQNASPFKFTAFQAGPRICLGKD 481
G +V P R+ ++ PD F P R+ + + + + F AG C+G
Sbjct: 340 HEGDLVAASPAISNRIPEDF-PDPHDFVPARYEQPRQEDLLNRWTWIPFGAGRHRCVGAA 398
Query: 482 SAYLQMKMALAILCRFFKFKLVPDHPVKYR 511
A +Q+K ++L R ++F++ P YR
Sbjct: 399 FAIMQIKAIFSVLLREYEFEMA-QPPESYR 427
>pdb|4DVQ|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4FDH|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
Length = 483
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 47/97 (48%), Gaps = 4/97 (4%)
Query: 384 KLYYLHAVITETLRLYPAVPQDPKGILEDDVLPDGTKVKAGGMVTYVPYSMGRMEYNWGP 443
+L L A + ETLRLYP V + ++ D++ + AG +V YS+GR + P
Sbjct: 335 ELPLLRAALKETLRLYP-VGLFLERVVSSDLVLQNYHIPAGTLVQVFLYSLGRNAALF-P 392
Query: 444 DAASFKPERWLKDGVFQNASPFKFTAFQAGPRICLGK 480
+ P+RWL + + F F G R CLG+
Sbjct: 393 RPERYNPQRWLD--IRGSGRNFHHVPFGFGMRQCLGR 427
>pdb|2HI4|A Chain A, Crystal Structure Of Human Microsomal P450 1a2 In Complex
With Alpha-Naphthoflavone
Length = 495
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 93/445 (20%), Positives = 166/445 (37%), Gaps = 72/445 (16%)
Query: 111 YMEVLLGDG---IFNVD-GELWRKQRKTA-----SFEFASKNLRDFSTKVFREYSLKLSS 161
Y L+ DG F+ D G +W +R+ A +F AS S + S + +
Sbjct: 88 YTSTLITDGQSLTFSTDSGPVWAARRRLAQNALNTFSIASDPASSSSCYLEEHVSKEAKA 147
Query: 162 ILTQASCHNQEIDMQELLM--------RMTLDSICKVGFGVEIGTLAPNLPDNRFAQAFD 213
++++ +QEL+ + S+ V + G P D + +
Sbjct: 148 LISR---------LQELMAGPGHFDPYNQVVVSVANVIGAMCFGQHFPESSDEMLSLVKN 198
Query: 214 TANIIVTLRFIDPL--WKIKRFLHLGSEALLDKSIKVIDDFTYSVIKRRKAEIQEARETS 271
T + T +PL + I R+L + +++ F + + +QE +
Sbjct: 199 THEFVETASSGNPLDFFPILRYLP-------NPALQRFKAFNQRFLWFLQKTVQEHYQDF 251
Query: 272 DGTKIKYDILTRFIELSEDPESN---LTDKSLRDVVLNFVIAGRDTTATTLTWGVYMAMT 328
D ++ F + P ++ + + + ++V + AG DT T ++W + +T
Sbjct: 252 DKNSVRDITGALFKHSKKGPRASGNLIPQEKIVNLVNDIFGAGFDTVTTAISWSLMYLVT 311
Query: 329 HNHVAEKLYSELKAFEADRAKEEKASLVQYDKEDLESFNQRVTQFAGLLNYDSMGKLYYL 388
+ K+ EL + +E + L +L YL
Sbjct: 312 KPEIQRKIQKEL---DTVIGRERRPRL------------------------SDRPQLPYL 344
Query: 389 HAVITETLRLYPAVP-QDPKGILEDDVLPDGTKVKAGGMVTYVPYSMGRMEYNWGPDAAS 447
A I ET R +P P D L +G + V + + W D +
Sbjct: 345 EAFILETFRHSSFLPFTIPHSTTRDTTL-NGFYIPKKCCVFVNQWQVNHDPELWE-DPSE 402
Query: 448 FKPERWL-KDGVFQNASPF--KFTAFQAGPRICLGKDSAYLQMKMALAILCRFFKFKLVP 504
F+PER+L DG N P K F G R C+G+ A ++ + LAIL + +F + P
Sbjct: 403 FRPERFLTADGTAIN-KPLSEKMMLFGMGKRRCIGEVLAKWEIFLFLAILLQQLEFSVPP 461
Query: 505 DHPVKYRMMTILSMEHGLKLTVERR 529
V + L+M+H V+ R
Sbjct: 462 GVKVDLTPIYGLTMKHARCEHVQAR 486
>pdb|3GW9|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
Length = 450
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 72/340 (21%), Positives = 136/340 (40%), Gaps = 59/340 (17%)
Query: 172 EIDMQELLMRMTLDSICKVGFGVEIGTLAPNLPDNRFAQ--AFDTANIIVTLRFIDPLWK 229
EI++ E M +++ C+ FG + L L RFAQ A +++I F+ L K
Sbjct: 137 EINLLEDCSTMIINTACQCLFGED---LRKRLDARRFAQLLAKMESSLIPAAVFLPILLK 193
Query: 230 IKRFLHLGSEALLDKSIKVIDDFTYSVIKRRKAEIQEARETSDGTKIKYDILTRFIELSE 289
+ + K++ + +I R++ E+ + TSD +L+ +
Sbjct: 194 LPLPQSARCHEARTELQKILSEI---IIARKEEEVNKDSSTSD-------LLSGLLSAVY 243
Query: 290 DPESNLTDKSLRDVVLNFVIAGRDTTATTLTWGVYMAMTHNHVAEKLYSELKAFEADRAK 349
+ ++ + +++ + AG+ T++ T TW + M +V
Sbjct: 244 RDGTPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLMHPANV----------------- 286
Query: 350 EEKASLVQYDKEDLESFNQRVTQFAGLLNYDS-MGKLYYLHAVITETLRLYPAVPQDPKG 408
+ LE+ + + +F LNY++ M ++ + E++R P P
Sbjct: 287 -----------KHLEALRKEIEEFPAQLNYNNVMDEMPFAERCARESIRRDP-----PLL 330
Query: 409 ILEDDVLPD---GTKVKAGGMVTYVPYSMGRMEYNWGPDAASFKPERWLKDGVFQNASPF 465
+L V+ D G+ V G + + + P+ + PER D + A
Sbjct: 331 MLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPER---DEKVEGA--- 384
Query: 466 KFTAFQAGPRICLGKDSAYLQMKMALAILCRFFKFKLVPD 505
F F AG C+G+ LQ+K LA R + F+L+ D
Sbjct: 385 -FIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQLLRD 423
>pdb|3TIK|A Chain A, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|B Chain B, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|C Chain C, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|D Chain D, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
Length = 454
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 72/340 (21%), Positives = 136/340 (40%), Gaps = 59/340 (17%)
Query: 172 EIDMQELLMRMTLDSICKVGFGVEIGTLAPNLPDNRFAQ--AFDTANIIVTLRFIDPLWK 229
EI++ E M +++ C+ FG + L L RFAQ A +++I F+ L K
Sbjct: 137 EINLLEDCSTMIINTACQCLFGED---LRKRLDARRFAQLLAKMESSLIPAAVFLPILLK 193
Query: 230 IKRFLHLGSEALLDKSIKVIDDFTYSVIKRRKAEIQEARETSDGTKIKYDILTRFIELSE 289
+ + K++ + +I R++ E+ + TSD +L+ +
Sbjct: 194 LPLPQSARCHEARTELQKILSEI---IIARKEEEVNKDSSTSD-------LLSGLLSAVY 243
Query: 290 DPESNLTDKSLRDVVLNFVIAGRDTTATTLTWGVYMAMTHNHVAEKLYSELKAFEADRAK 349
+ ++ + +++ + AG+ T++ T TW + M +V
Sbjct: 244 RDGTPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLMHPANV----------------- 286
Query: 350 EEKASLVQYDKEDLESFNQRVTQFAGLLNYDS-MGKLYYLHAVITETLRLYPAVPQDPKG 408
+ LE+ + + +F LNY++ M ++ + E++R P P
Sbjct: 287 -----------KHLEALRKEIEEFPAQLNYNNVMDEMPFAERCARESIRRDP-----PLL 330
Query: 409 ILEDDVLPD---GTKVKAGGMVTYVPYSMGRMEYNWGPDAASFKPERWLKDGVFQNASPF 465
+L V+ D G+ V G + + + P+ + PER D + A
Sbjct: 331 MLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPER---DEKVEGA--- 384
Query: 466 KFTAFQAGPRICLGKDSAYLQMKMALAILCRFFKFKLVPD 505
F F AG C+G+ LQ+K LA R + F+L+ D
Sbjct: 385 -FIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQLLRD 423
>pdb|3G1Q|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
Length = 450
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 72/340 (21%), Positives = 136/340 (40%), Gaps = 59/340 (17%)
Query: 172 EIDMQELLMRMTLDSICKVGFGVEIGTLAPNLPDNRFAQ--AFDTANIIVTLRFIDPLWK 229
EI++ E M +++ C+ FG + L L RFAQ A +++I F+ L K
Sbjct: 138 EINLLEDCSTMIINTACQCLFGED---LRKRLDARRFAQLLAKMESSLIPAAVFLPILLK 194
Query: 230 IKRFLHLGSEALLDKSIKVIDDFTYSVIKRRKAEIQEARETSDGTKIKYDILTRFIELSE 289
+ + K++ + +I R++ E+ + TSD +L+ +
Sbjct: 195 LPLPQSARCHEARTELQKILSEI---IIARKEEEVNKDSSTSD-------LLSGLLSAVY 244
Query: 290 DPESNLTDKSLRDVVLNFVIAGRDTTATTLTWGVYMAMTHNHVAEKLYSELKAFEADRAK 349
+ ++ + +++ + AG+ T++ T TW + M +V
Sbjct: 245 RDGTPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLMHPANV----------------- 287
Query: 350 EEKASLVQYDKEDLESFNQRVTQFAGLLNYDS-MGKLYYLHAVITETLRLYPAVPQDPKG 408
+ LE+ + + +F LNY++ M ++ + E++R P P
Sbjct: 288 -----------KHLEALRKEIEEFPAQLNYNNVMDEMPFAERCARESIRRDP-----PLL 331
Query: 409 ILEDDVLPD---GTKVKAGGMVTYVPYSMGRMEYNWGPDAASFKPERWLKDGVFQNASPF 465
+L V+ D G+ V G + + + P+ + PER D + A
Sbjct: 332 MLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPER---DEKVEGA--- 385
Query: 466 KFTAFQAGPRICLGKDSAYLQMKMALAILCRFFKFKLVPD 505
F F AG C+G+ LQ+K LA R + F+L+ D
Sbjct: 386 -FIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQLLRD 424
>pdb|2WV2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Brucei In Complex With Fluconazole
Length = 475
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 72/340 (21%), Positives = 136/340 (40%), Gaps = 59/340 (17%)
Query: 172 EIDMQELLMRMTLDSICKVGFGVEIGTLAPNLPDNRFAQ--AFDTANIIVTLRFIDPLWK 229
EI++ E M +++ C+ FG + L L RFAQ A +++I F+ L K
Sbjct: 150 EINLLEDCSTMIINTACQCLFGED---LRKRLDARRFAQLLAKMESSLIPAAVFLPILLK 206
Query: 230 IKRFLHLGSEALLDKSIKVIDDFTYSVIKRRKAEIQEARETSDGTKIKYDILTRFIELSE 289
+ + K++ + +I R++ E+ + TSD +L+ +
Sbjct: 207 LPLPQSARCHEARTELQKILSEI---IIARKEEEVNKDSSTSD-------LLSGLLSAVY 256
Query: 290 DPESNLTDKSLRDVVLNFVIAGRDTTATTLTWGVYMAMTHNHVAEKLYSELKAFEADRAK 349
+ ++ + +++ + AG+ T++ T TW + M +V
Sbjct: 257 RDGTPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLMHPANV----------------- 299
Query: 350 EEKASLVQYDKEDLESFNQRVTQFAGLLNYDS-MGKLYYLHAVITETLRLYPAVPQDPKG 408
+ LE+ + + +F LNY++ M ++ + E++R P P
Sbjct: 300 -----------KHLEALRKEIEEFPAQLNYNNVMDEMPFAERCARESIRRDP-----PLL 343
Query: 409 ILEDDVLPD---GTKVKAGGMVTYVPYSMGRMEYNWGPDAASFKPERWLKDGVFQNASPF 465
+L V+ D G+ V G + + + P+ + PER D + A
Sbjct: 344 MLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPER---DEKVEGA--- 397
Query: 466 KFTAFQAGPRICLGKDSAYLQMKMALAILCRFFKFKLVPD 505
F F AG C+G+ LQ+K LA R + F+L+ D
Sbjct: 398 -FIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQLLRD 436
>pdb|3P99|A Chain A, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|B Chain B, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|C Chain C, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|D Chain D, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
Length = 453
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 72/340 (21%), Positives = 136/340 (40%), Gaps = 59/340 (17%)
Query: 172 EIDMQELLMRMTLDSICKVGFGVEIGTLAPNLPDNRFAQ--AFDTANIIVTLRFIDPLWK 229
EI++ E M +++ C+ FG + L L RFAQ A +++I F+ L K
Sbjct: 136 EINLLEDCSTMIINTACQCLFGED---LRKRLDARRFAQLLAKMESSLIPAAVFLPILLK 192
Query: 230 IKRFLHLGSEALLDKSIKVIDDFTYSVIKRRKAEIQEARETSDGTKIKYDILTRFIELSE 289
+ + K++ + +I R++ E+ + TSD +L+ +
Sbjct: 193 LPLPQSARCHEARTELQKILSEI---IIARKEEEVNKDSSTSD-------LLSGLLSAVY 242
Query: 290 DPESNLTDKSLRDVVLNFVIAGRDTTATTLTWGVYMAMTHNHVAEKLYSELKAFEADRAK 349
+ ++ + +++ + AG+ T++ T TW + M +V
Sbjct: 243 RDGTPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLMHPANV----------------- 285
Query: 350 EEKASLVQYDKEDLESFNQRVTQFAGLLNYDS-MGKLYYLHAVITETLRLYPAVPQDPKG 408
+ LE+ + + +F LNY++ M ++ + E++R P P
Sbjct: 286 -----------KHLEALRKEIEEFPAQLNYNNVMDEMPFAERCARESIRRDP-----PLL 329
Query: 409 ILEDDVLPD---GTKVKAGGMVTYVPYSMGRMEYNWGPDAASFKPERWLKDGVFQNASPF 465
+L V+ D G+ V G + + + P+ + PER D + A
Sbjct: 330 MLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPER---DEKVEGA--- 383
Query: 466 KFTAFQAGPRICLGKDSAYLQMKMALAILCRFFKFKLVPD 505
F F AG C+G+ LQ+K LA R + F+L+ D
Sbjct: 384 -FIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQLLRD 422
>pdb|2X2N|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|C Chain C, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|D Chain D, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
Length = 475
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 72/340 (21%), Positives = 135/340 (39%), Gaps = 59/340 (17%)
Query: 172 EIDMQELLMRMTLDSICKVGFGVEIGTLAPNLPDNRFAQ--AFDTANIIVTLRFIDPLWK 229
EI++ E M +++ C+ FG + L L RFAQ A +++I F+ L K
Sbjct: 150 EINLLEDCSTMIINTACQCLFGED---LRKRLDARRFAQLLAKMESSLIPAAVFLPILLK 206
Query: 230 IKRFLHLGSEALLDKSIKVIDDFTYSVIKRRKAEIQEARETSDGTKIKYDILTRFIELSE 289
+ + K++ + +I R+ A + + TSD +L+ +
Sbjct: 207 LPLPQSARCHEARTELQKILSEI---IIARKAAAVNKDSSTSD-------LLSGLLSAVY 256
Query: 290 DPESNLTDKSLRDVVLNFVIAGRDTTATTLTWGVYMAMTHNHVAEKLYSELKAFEADRAK 349
+ ++ + +++ + AG+ T++ T TW + M +V
Sbjct: 257 RDGTPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLMHPANV----------------- 299
Query: 350 EEKASLVQYDKEDLESFNQRVTQFAGLLNYDS-MGKLYYLHAVITETLRLYPAVPQDPKG 408
+ LE+ + + +F LNY++ M ++ + E++R P P
Sbjct: 300 -----------KHLEALRKEIEEFPAQLNYNNVMDEMPFAERCARESIRRDP-----PLL 343
Query: 409 ILEDDVLPD---GTKVKAGGMVTYVPYSMGRMEYNWGPDAASFKPERWLKDGVFQNASPF 465
+L V+ D G+ V G + + + P+ + PER D + A
Sbjct: 344 MLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPER---DEKVEGA--- 397
Query: 466 KFTAFQAGPRICLGKDSAYLQMKMALAILCRFFKFKLVPD 505
F F AG C+G+ LQ+K LA R + F+L+ D
Sbjct: 398 -FIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQLLRD 436
>pdb|1ODO|A Chain A, 1.85 A Structure Of Cyp154a1 From Streptomyces Coelicolor
A3(2)
Length = 408
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 13/114 (11%)
Query: 391 VITETLRLYPAVPQDP-KGILEDDVLPDGTKVKAGGMVTYVPYSMGRMEYNWGPDAASFK 449
V+ ETLR PAV P + + D LPDG + A G Y+ +W DA +F
Sbjct: 278 VVEETLRHEPAVKHLPLRYAVTDIALPDGRTI-ARGEPILASYAAANRHPDWHEDADTFD 336
Query: 450 PERWLKDGVFQNASPFKFTAFQAGPRICLGKDSAYLQMKMAL-AILCRFFKFKL 502
R +K+ + AF G CLG A +++ +AL ++ RF +L
Sbjct: 337 ATRTVKEHL----------AFGHGVHFCLGAPLARMEVTLALESLFGRFPDLRL 380
>pdb|3PM0|A Chain A, Structural Characterization Of The Complex Between Alpha-
Naphthoflavone And Human Cytochrome P450 1b1 (Cyp1b1)
Length = 507
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 102/528 (19%), Positives = 184/528 (34%), Gaps = 123/528 (23%)
Query: 33 SQKNQRGPKTWPFVG--AAIEQLMNYD------RMHDWLVNYLSELKTVVVPMPFTTYTY 84
S+ GP WP +G AA+ Q + R D L VV+ +
Sbjct: 7 SKGKPPGPFAWPLIGNAAAVGQAAHLSFARLARRYGDVFQIRLGSCPIVVLNGERAIHQA 66
Query: 85 IADPANVEHVLKTNFANYPKGETYHSYMEVLLGDGI-FNVDGELWRKQRKTASFEFASKN 143
+ + FA+ P ++ S+ V G + F E W+ QR+ A
Sbjct: 67 LVQQGSA-------FADRP---SFASFRVVSGGRSMAFGHYSEHWKVQRRAAH-----SM 111
Query: 144 LRDFSTKVFREYSL----------KLSSILTQASCHNQEIDMQELLMRMTLDSICKVGFG 193
+R+F T+ R + +L ++L + S +D + L + + + V FG
Sbjct: 112 MRNFFTRQPRSRQVLEGHVLSEARELVALLVRGSADGAFLDPRPLTVVAVANVMSAVCFG 171
Query: 194 VEIGTLAPNL-----PDNRFAQAFDTANIIVTLR----FIDPLWKIKR-FLHLG---SEA 240
P + F + +++ + F +P+ + R F L S
Sbjct: 172 CRYSHDDPEFRELLSHNEEFGRTVGAGSLVDVMPWLQYFPNPVRTVFREFEQLNRNFSNF 231
Query: 241 LLDKSIKVIDDFTYSVIKRRKAEI------QEARETSDGTKIKYDILTRFIELSEDPESN 294
+LDK ++ + R + ++A S G + D+ E+ +
Sbjct: 232 ILDKFLRHCESLRPGAAPRDMMDAFILSAEKKAAGDSHGGGARLDL--------ENVPAT 283
Query: 295 LTDKSLRDVVLNFVIAGRDTTATTLTWGVYMAMTHNHVAEKLYSELKAFEADRAKEEKAS 354
+TD A +DT +T L W + + + V ++ +EL
Sbjct: 284 ITD---------IFGASQDTLSTALQWLLLLFTRYPDVQTRVQAELD------------- 321
Query: 355 LVQYDKEDLESFNQRVTQFAGLLNYDSMG---KLYYLHAVITETLRLYPAVPQDPKGILE 411
Q G MG L Y+ A + E +R VP
Sbjct: 322 -----------------QVVGRDRLPCMGDQPNLPYVLAFLYEAMRFSSFVPV------- 357
Query: 412 DDVLPDGTKVKAGGMVTYVP---------YSMGRMEYNWGPDAASFKPERWL-KDGVFQN 461
+P T + ++P +S+ W P+ +F P R+L KDG+
Sbjct: 358 --TIPHATTANTSVLGYHIPKDTVVFVNQWSVNHDPLKW-PNPENFDPARFLDKDGLINK 414
Query: 462 ASPFKFTAFQAGPRICLGKDSAYLQMKMALAILCRFFKFKLVPDHPVK 509
+ F G R C+G++ + +Q+ + ++IL F+ P+ P K
Sbjct: 415 DLTSRVMIFSVGKRRCIGEELSKMQLFLFISILAHQCDFRANPNEPAK 462
>pdb|2WUZ|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WUZ|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WX2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
pdb|2WX2|B Chain B, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
Length = 473
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 70/149 (46%), Gaps = 12/149 (8%)
Query: 359 DKEDLESFNQRVTQFAGLLNYDS-MGKLYYLHAVITETLRLYPAVPQDPKGILEDDVLPD 417
+K+ L+ ++ + +F LNYD+ M ++ + + E++R P + + +++ +V
Sbjct: 298 NKKWLDKLHKEIDEFPAQLNYDNVMDEMPFAERCVRESIRRDPPLLMVMR-MVKAEVKVG 356
Query: 418 GTKVKAGGMVTYVPYSMGRMEYNWGPDAASFKPERWLK-DGVFQNASPFKFTAFQAGPRI 476
V G ++ P + + P+ + PER K DG F F AG
Sbjct: 357 SYVVPKGDIIACSPL-LSHHDEEAFPNPRLWDPERDEKVDGAF--------IGFGAGVHK 407
Query: 477 CLGKDSAYLQMKMALAILCRFFKFKLVPD 505
C+G+ A LQ+K LA R + F+L+ D
Sbjct: 408 CIGQKFALLQVKTILATAFREYDFQLLRD 436
>pdb|3K1O|A Chain A, Crystal Structure Of Sterol 14-alpha Demethylase (cyp51)
From Trypanosoma Cruzi In Complex With A Potential
Antichagasic Drug, Posaconazole
pdb|3KSW|A Chain A, Crystal Structure Of Sterol 14alpha-demethylase (cyp51)
From Trypanosoma Cruzi In Complex With An Inhibitor Vnf
((4-(4-
Chlorophenyl)-n-[2-(1h-imidazol-1-yl)-1-
phenylethyl]benzamide)
Length = 458
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 70/149 (46%), Gaps = 12/149 (8%)
Query: 359 DKEDLESFNQRVTQFAGLLNYDS-MGKLYYLHAVITETLRLYPAVPQDPKGILEDDVLPD 417
+K+ L+ ++ + +F LNYD+ M ++ + + E++R P + + +++ +V
Sbjct: 283 NKKWLDKLHKEIDEFPAQLNYDNVMDEMPFAERCVRESIRRDPPLLMVMR-MVKAEVKVG 341
Query: 418 GTKVKAGGMVTYVPYSMGRMEYNWGPDAASFKPERWLK-DGVFQNASPFKFTAFQAGPRI 476
V G ++ P + + P+ + PER K DG F F AG
Sbjct: 342 SYVVPKGDIIACSPL-LSHHDEEAFPNPRLWDPERDEKVDGAF--------IGFGAGVHK 392
Query: 477 CLGKDSAYLQMKMALAILCRFFKFKLVPD 505
C+G+ A LQ+K LA R + F+L+ D
Sbjct: 393 CIGQKFALLQVKTILATAFREYDFQLLRD 421
>pdb|3KHM|A Chain A, Crystal Structure Of Sterol 14alpha-Demethylase (Cyp51)
From Trypanosoma Cruzi In Complex With Inhibitor
Fluconazole
Length = 464
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 70/149 (46%), Gaps = 12/149 (8%)
Query: 359 DKEDLESFNQRVTQFAGLLNYDS-MGKLYYLHAVITETLRLYPAVPQDPKGILEDDVLPD 417
+K+ L+ ++ + +F LNYD+ M ++ + + E++R P + + +++ +V
Sbjct: 289 NKKWLDKLHKEIDEFPAQLNYDNVMDEMPFAERCVRESIRRDPPLLMVMR-MVKAEVKVG 347
Query: 418 GTKVKAGGMVTYVPYSMGRMEYNWGPDAASFKPERWLK-DGVFQNASPFKFTAFQAGPRI 476
V G ++ P + + P+ + PER K DG F F AG
Sbjct: 348 SYVVPKGDIIACSPL-LSHHDEEAFPNPRLWDPERDEKVDGAF--------IGFGAGVHK 398
Query: 477 CLGKDSAYLQMKMALAILCRFFKFKLVPD 505
C+G+ A LQ+K LA R + F+L+ D
Sbjct: 399 CIGQKFALLQVKTILATAFREYDFQLLRD 427
>pdb|1DT6|A Chain A, Structure Of Mammalian Cytochrome P450 2c5
pdb|1N6B|A Chain A, Microsomal Cytochrome P450 2c5/3lvdh Complex With A
Dimethyl Derivative Of Sulfaphenazole
pdb|1NR6|A Chain A, Microsomal Cytochrome P450 2c53LVDH COMPLEX WITH
DICLOFENAC
Length = 473
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 92/225 (40%), Gaps = 43/225 (19%)
Query: 284 FIELSEDPESNLTDKSLRDVVLNFVIAGRDTTATTLTWGVYMAMTHNHVAEKLYSELKAF 343
I++ ++ T +SL V + AG +TT+TTL + + + + H VA ++ E+
Sbjct: 250 LIKMEQENNLEFTLESLVIAVSDLFGAGTETTSTTLRYSLLLLLKHPEVAARVQEEI--- 306
Query: 344 EADRAKEEKASLVQYDKEDLESFNQRVTQFAGLLNYDSMGKLYYLHAVITETLRLYPAVP 403
+R S D+ ++ Y AVI E R +P
Sbjct: 307 --ERVIGRHRSPCMQDR----------------------SRMPYTDAVIHEIQRFIDLLP 342
Query: 404 QDPKGILEDDV------LPDGTKVKAGGMVTYVPYSMGRMEYNWGPDAASFKPERWLKD- 456
+ + DV +P GT + +T V + + P+ F P +L +
Sbjct: 343 TNLPHAVTRDVRFRNYFIPKGTDIITS--LTSVLH-----DEKAFPNPKVFDPGHFLDES 395
Query: 457 GVFQNASPFKFTAFQAGPRICLGKDSAYLQMKMALAILCRFFKFK 501
G F+ + F F AG R+C+G+ A +++ + L + + FK +
Sbjct: 396 GNFKKSD--YFMPFSAGKRMCVGEGLARMELFLFLTSILQNFKLQ 438
>pdb|2WH8|A Chain A, Interaction Of Mycobacterium Tuberculosis Cyp130 With
Heterocyclic Arylamines
pdb|2WH8|B Chain B, Interaction Of Mycobacterium Tuberculosis Cyp130 With
Heterocyclic Arylamines
pdb|2WH8|C Chain C, Interaction Of Mycobacterium Tuberculosis Cyp130 With
Heterocyclic Arylamines
pdb|2WH8|D Chain D, Interaction Of Mycobacterium Tuberculosis Cyp130 With
Heterocyclic Arylamines
pdb|2WHF|A Chain A, Interaction Of Mycobacterium Tuberculosis Cyp130 With
Heterocyclic Arylamines
Length = 413
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 46/112 (41%), Gaps = 12/112 (10%)
Query: 392 ITETLRLYPAVPQDPKGILEDDVLPDGTKVKAGGMVTYVPYSMGRMEYNWGPDAASFKPE 451
+ E LRL V + D + D T + AG V + S R E +GPDAA
Sbjct: 286 VEELLRLTSPVQGLARTTTRDVTIGD-TTIPAGRRVLLLYGSANRDERQYGPDAAELDVT 344
Query: 452 RWLKDGVFQNASPFKFTAFQAGPRICLGKDSAYLQMKMALA-ILCRFFKFKL 502
R P F G CLG +A +Q ++AL +L R F++
Sbjct: 345 R----------CPRNILTFSHGAHHCLGAAAARMQCRVALTELLARCPDFEV 386
>pdb|2UUQ|A Chain A, Crystal Structure Of Cyp130 From Mycobacterium
Tuberculosis In The Ligand-Free Form
pdb|2UVN|A Chain A, Crystal Structure Of Econazole-Bound Cyp130 From
Mycobacterium Tuberculosis
pdb|2UVN|B Chain B, Crystal Structure Of Econazole-Bound Cyp130 From
Mycobacterium Tuberculosis
Length = 414
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 46/112 (41%), Gaps = 12/112 (10%)
Query: 392 ITETLRLYPAVPQDPKGILEDDVLPDGTKVKAGGMVTYVPYSMGRMEYNWGPDAASFKPE 451
+ E LRL V + D + D T + AG V + S R E +GPDAA
Sbjct: 287 VEELLRLTSPVQGLARTTTRDVTIGD-TTIPAGRRVLLLYGSANRDERQYGPDAAELDVT 345
Query: 452 RWLKDGVFQNASPFKFTAFQAGPRICLGKDSAYLQMKMALA-ILCRFFKFKL 502
R P F G CLG +A +Q ++AL +L R F++
Sbjct: 346 R----------CPRNILTFSHGAHHCLGAAAARMQCRVALTELLARCPDFEV 387
>pdb|2WGY|A Chain A, Crystal Structure Of The G243a Mutant Of Cyp130 From M.
Tuberculosis
Length = 413
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 46/112 (41%), Gaps = 12/112 (10%)
Query: 392 ITETLRLYPAVPQDPKGILEDDVLPDGTKVKAGGMVTYVPYSMGRMEYNWGPDAASFKPE 451
+ E LRL V + D + D T + AG V + S R E +GPDAA
Sbjct: 286 VEELLRLTSPVQGLARTTTRDVTIGD-TTIPAGRRVLLLYGSANRDERQYGPDAAELDVT 344
Query: 452 RWLKDGVFQNASPFKFTAFQAGPRICLGKDSAYLQMKMALA-ILCRFFKFKL 502
R P F G CLG +A +Q ++AL +L R F++
Sbjct: 345 R----------CPRNILTFSHGAHHCLGAAAARMQCRVALTELLARCPDFEV 386
>pdb|1Z8Q|A Chain A, Ferrous Dioxygen Complex Of The A245t Cytochrome P450eryf
Length = 404
Score = 35.4 bits (80), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 18/86 (20%), Positives = 43/86 (50%), Gaps = 12/86 (13%)
Query: 244 KSIKVIDDFTYSVIKRRKAEIQEARETSDGTKIKYDILTRFIELSEDPESNLTDKSLRDV 303
++ + + +F +++RR+ E + D+L+ I + +D + L+ L +
Sbjct: 187 QAAREVVNFILDLVERRRTEPGD------------DLLSALIRVQDDDDGRLSADELTSI 234
Query: 304 VLNFVIAGRDTTATTLTWGVYMAMTH 329
L ++AG +T+ + + G Y+ +TH
Sbjct: 235 ALVLLLAGFETSVSLIGIGTYLLLTH 260
>pdb|1Z8P|A Chain A, Ferrous Dioxygen Complex Of The A245s Cytochrome P450eryf
Length = 404
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 17/86 (19%), Positives = 43/86 (50%), Gaps = 12/86 (13%)
Query: 244 KSIKVIDDFTYSVIKRRKAEIQEARETSDGTKIKYDILTRFIELSEDPESNLTDKSLRDV 303
++ + + +F +++RR+ E + D+L+ I + +D + L+ L +
Sbjct: 187 QAAREVVNFILDLVERRRTEPGD------------DLLSALIRVQDDDDGRLSADELTSI 234
Query: 304 VLNFVIAGRDTTATTLTWGVYMAMTH 329
L ++AG +++ + + G Y+ +TH
Sbjct: 235 ALVLLLAGFESSVSLIGIGTYLLLTH 260
>pdb|1JIP|A Chain A, P450eryf(A245s)KETOCONAZOLE
Length = 403
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 17/86 (19%), Positives = 43/86 (50%), Gaps = 12/86 (13%)
Query: 244 KSIKVIDDFTYSVIKRRKAEIQEARETSDGTKIKYDILTRFIELSEDPESNLTDKSLRDV 303
++ + + +F +++RR+ E + D+L+ I + +D + L+ L +
Sbjct: 186 QAAREVVNFILDLVERRRTEPGD------------DLLSALIRVQDDDDGRLSADELTSI 233
Query: 304 VLNFVIAGRDTTATTLTWGVYMAMTH 329
L ++AG +++ + + G Y+ +TH
Sbjct: 234 ALVLLLAGFESSVSLIGIGTYLLLTH 259
>pdb|1EGY|A Chain A, Cytochrome P450eryf With 9-Aminophenanthrene Bound
pdb|1EUP|A Chain A, X-Ray Crystal Structure Of Cytochrome P450eryf With
Androstendione Bound
pdb|1JIN|A Chain A, P450eryfKETOCONAZOLE
pdb|1OXA|A Chain A, Cytochrome P450 (Donor:o2 Oxidoreductase)
Length = 403
Score = 33.9 bits (76), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 17/86 (19%), Positives = 42/86 (48%), Gaps = 12/86 (13%)
Query: 244 KSIKVIDDFTYSVIKRRKAEIQEARETSDGTKIKYDILTRFIELSEDPESNLTDKSLRDV 303
++ + + +F +++RR+ E + D+L+ I + +D + L+ L +
Sbjct: 186 QAAREVVNFILDLVERRRTEPGD------------DLLSALISVQDDDDGRLSADELTSI 233
Query: 304 VLNFVIAGRDTTATTLTWGVYMAMTH 329
L ++AG + + + + G Y+ +TH
Sbjct: 234 ALVLLLAGFEASVSLIGIGTYLLLTH 259
>pdb|1Z8O|A Chain A, Ferrous Dioxygen Complex Of The Wild-Type Cytochrome
P450eryf
Length = 404
Score = 33.9 bits (76), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 17/86 (19%), Positives = 42/86 (48%), Gaps = 12/86 (13%)
Query: 244 KSIKVIDDFTYSVIKRRKAEIQEARETSDGTKIKYDILTRFIELSEDPESNLTDKSLRDV 303
++ + + +F +++RR+ E + D+L+ I + +D + L+ L +
Sbjct: 187 QAAREVVNFILDLVERRRTEPGD------------DLLSALIRVQDDDDGRLSADELTSI 234
Query: 304 VLNFVIAGRDTTATTLTWGVYMAMTH 329
L ++AG + + + + G Y+ +TH
Sbjct: 235 ALVLLLAGFEASVSLIGIGTYLLLTH 260
>pdb|1JIO|A Chain A, P450eryf/6deb
Length = 403
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 17/86 (19%), Positives = 42/86 (48%), Gaps = 12/86 (13%)
Query: 244 KSIKVIDDFTYSVIKRRKAEIQEARETSDGTKIKYDILTRFIELSEDPESNLTDKSLRDV 303
++ + + +F +++RR+ E + D+L+ I + +D + L+ L +
Sbjct: 186 QAAREVVNFILDLVERRRTEPGD------------DLLSALIRVQDDDDGRLSADELTSI 233
Query: 304 VLNFVIAGRDTTATTLTWGVYMAMTH 329
L ++AG + + + + G Y+ +TH
Sbjct: 234 ALVLLLAGFEASVSLIGIGTYLLLTH 259
>pdb|2Y46|A Chain A, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In C 2 2 21 Space Group
pdb|2Y46|B Chain B, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In C 2 2 21 Space Group
pdb|2Y46|C Chain C, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In C 2 2 21 Space Group
pdb|2Y5N|A Chain A, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin V In P21 Space Group
pdb|2Y5N|B Chain B, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin V In P21 Space Group
pdb|2Y5Z|A Chain A, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In C2221 Space Group
pdb|2Y5Z|B Chain B, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In C2221 Space Group
pdb|2Y5Z|C Chain C, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In C2221 Space Group
pdb|2Y98|A Chain A, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In P21212 Space Group
pdb|2YGX|A Chain A, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YGX|B Chain B, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YGX|C Chain C, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YGX|D Chain D, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YCA|A Chain A, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In P21212 Space Group
Length = 417
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 45/216 (20%), Positives = 89/216 (41%), Gaps = 56/216 (25%)
Query: 279 DILTRFIELSEDPESNLTDKSLRDVVLNFVIAGRDTTATTLTWGVYMAMTHNHVAEKLYS 338
D+++ ++ + D + +L+++ L D+ + ++AG ++T T + VY+ MT + +L
Sbjct: 224 DLVSALVQ-ARDQQDSLSEQELLDLAIGLLVAGYESTTTQIADFVYLLMTRPELRRQLL- 281
Query: 339 ELKAFEADRAKEEKASLVQYDKEDLESFNQRVTQFAGLLNYDSMGKLYYLHAVITETLRL 398
DR E + S + +T++ L +G + +AV TLR
Sbjct: 282 -------DR------------PELIPSAVEELTRWVPL----GVGTAFPRYAVEDVTLR- 317
Query: 399 YPAVPQDPKGILEDDVLPDGTKVKAGGMVTYVPYSMGRMEYNWGPDAASFKPERWLKDGV 458
G ++AG V + R + + PDA D +
Sbjct: 318 -------------------GVTIRAGEPVLASTGAANRDQAQF-PDA----------DRI 347
Query: 459 FQNASPFKFTAFQAGPRICLGKDSAYLQMKMALAIL 494
+ +P + F G CLG A +++++AL +L
Sbjct: 348 DVDRTPNQHLGFGHGVHHCLGAPLARVELQVALEVL 383
>pdb|3A4G|A Chain A, Structure Of Cytochrome P450 Vdh From Pseudonocardia
Autotrophica (Trigonal Crystal Form)
pdb|3A4H|A Chain A, Structure Of Cytochrome P450 Vdh From Pseudonocardia
Autotrophica (Orthorhombic Crystal Form)
Length = 411
Score = 32.3 bits (72), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 75/215 (34%), Gaps = 56/215 (26%)
Query: 280 ILTRFIELSEDPESNLTDKSLRDVVLNFVIAGRDTTATTLTWGVYMAMTHNHVAEKLYSE 339
+L+ + +S++ L+ + L + + +IAG +TT + GV +TH KL +
Sbjct: 206 LLSSLLAVSDEDGDRLSQEELVAMAMLLLIAGHETTVNLIGNGVLALLTHPD-QRKLLA- 263
Query: 340 LKAFEADRAKEEKASLVQYDKEDLESFNQRVTQFAGLLNYDSMGKLYYLHAVITETLRLY 399
E SL+ + + E LR
Sbjct: 264 -----------EDPSLIS--------------------------------SAVEEFLRFD 280
Query: 400 PAVPQDPKGILEDDVLPDGTKVKAGGMVTYVPYSMGRMEYNWGPDAASFKPERWLKDGVF 459
V Q P +DV G + AG MV + R + +W P+ R GVF
Sbjct: 281 SPVSQAPIRFTAEDVTYSGVTIPAGEMVMLGLAAANR-DADWMPEPDRLDITRDASGGVF 339
Query: 460 QNASPFKFTAFQAGPRICLGKDSAYLQMKMALAIL 494
F G CLG A L+ ++A+ L
Sbjct: 340 ----------FGHGIHFCLGAQLARLEGRVAIGRL 364
>pdb|4AW3|A Chain A, Structure Of The Mixed-Function P450 Mycg F286v Mutant In
Complex With Mycinamicin V In P1 Space Group
pdb|4AW3|B Chain B, Structure Of The Mixed-Function P450 Mycg F286v Mutant In
Complex With Mycinamicin V In P1 Space Group
Length = 417
Score = 32.0 bits (71), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 45/216 (20%), Positives = 88/216 (40%), Gaps = 56/216 (25%)
Query: 279 DILTRFIELSEDPESNLTDKSLRDVVLNFVIAGRDTTATTLTWGVYMAMTHNHVAEKLYS 338
D+++ ++ + D + +L+++ L D+ + ++AG ++T T + VY+ MT + +L
Sbjct: 224 DLVSALVQ-ARDQQDSLSEQELLDLAIGLLVAGYESTTTQIADFVYLLMTRPELRRQLL- 281
Query: 339 ELKAFEADRAKEEKASLVQYDKEDLESFNQRVTQFAGLLNYDSMGKLYYLHAVITETLRL 398
DR E + S + +T++ L +G +AV TLR
Sbjct: 282 -------DR------------PELIPSAVEELTRWVPL----GVGTAVPRYAVEDVTLR- 317
Query: 399 YPAVPQDPKGILEDDVLPDGTKVKAGGMVTYVPYSMGRMEYNWGPDAASFKPERWLKDGV 458
G ++AG V + R + + PDA D +
Sbjct: 318 -------------------GVTIRAGEPVLASTGAANRDQAQF-PDA----------DRI 347
Query: 459 FQNASPFKFTAFQAGPRICLGKDSAYLQMKMALAIL 494
+ +P + F G CLG A +++++AL +L
Sbjct: 348 DVDRTPNQHLGFGHGVHHCLGAPLARVELQVALEVL 383
>pdb|3H0N|A Chain A, Crystal Structure Of A Duf1470 Family Protein (Jann_2411)
From Jannaschia Sp. Ccs1 At 1.45 A Resolution
Length = 188
Score = 32.0 bits (71), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 43/97 (44%), Gaps = 10/97 (10%)
Query: 346 DRAKEEKASLVQYDKEDLESFNQRVTQFAGLLNYDSMGKLYYLHAVITETLRLYPAVP-- 403
D K++ AS+ Q + +E F + ++ S G++ + LR +PA P
Sbjct: 43 DLLKDDPASVAQLGDDHVEGFVELARLLHTAIDALSNGQVATAATALNHLLRKHPATPEL 102
Query: 404 -QDPKGI-------LEDDVLPDGTKVKAGGMVTYVPY 432
QDP G L+ +++P T + A G+ + +
Sbjct: 103 AQDPDGTWRLHHHPLDAELVPXWTAICAEGLAREIGH 139
>pdb|3ZSN|A Chain A, Structure Of The Mixed-Function P450 Mycg F286a Mutant In
Complex With Mycinamicin Iv
pdb|3ZSN|B Chain B, Structure Of The Mixed-Function P450 Mycg F286a Mutant In
Complex With Mycinamicin Iv
pdb|3ZSN|C Chain C, Structure Of The Mixed-Function P450 Mycg F286a Mutant In
Complex With Mycinamicin Iv
Length = 417
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 45/216 (20%), Positives = 88/216 (40%), Gaps = 56/216 (25%)
Query: 279 DILTRFIELSEDPESNLTDKSLRDVVLNFVIAGRDTTATTLTWGVYMAMTHNHVAEKLYS 338
D+++ ++ + D + +L+++ L D+ + ++AG ++T T + VY+ MT + +L
Sbjct: 224 DLVSALVQ-ARDQQDSLSEQELLDLAIGLLVAGYESTTTQIADFVYLLMTRPELRRQLL- 281
Query: 339 ELKAFEADRAKEEKASLVQYDKEDLESFNQRVTQFAGLLNYDSMGKLYYLHAVITETLRL 398
DR E + S + +T++ L +G +AV TLR
Sbjct: 282 -------DR------------PELIPSAVEELTRWVPL----GVGTAAPRYAVEDVTLR- 317
Query: 399 YPAVPQDPKGILEDDVLPDGTKVKAGGMVTYVPYSMGRMEYNWGPDAASFKPERWLKDGV 458
G ++AG V + R + + PDA D +
Sbjct: 318 -------------------GVTIRAGEPVLASTGAANRDQAQF-PDA----------DRI 347
Query: 459 FQNASPFKFTAFQAGPRICLGKDSAYLQMKMALAIL 494
+ +P + F G CLG A +++++AL +L
Sbjct: 348 DVDRTPNQHLGFGHGVHHCLGAPLARVELQVALEVL 383
>pdb|2WHW|A Chain A, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WHW|B Chain B, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WI9|A Chain A, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WI9|B Chain B, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
Length = 436
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 7/68 (10%)
Query: 279 DILTRFIELSEDPESNLTDKSLRDVVLNFVIAGRDTTATTLTWGVYMAMTHNHVAEKLYS 338
D+L+ + S++ S LT + L + ++AG +TT + G+Y ++H
Sbjct: 232 DLLSALVRTSDEDGSRLTSEELLGMAHILLVAGHETTVNLIANGMYALLSHP-------D 284
Query: 339 ELKAFEAD 346
+L A AD
Sbjct: 285 QLAALRAD 292
>pdb|2VZ7|A Chain A, Crystal Structure Of The Yc-17-Bound Pikc D50n Mutant
pdb|2VZ7|B Chain B, Crystal Structure Of The Yc-17-Bound Pikc D50n Mutant
pdb|2VZM|A Chain A, Crystal Structure Of The Narbomycin-Bound Pikc D50n Mutant
pdb|2VZM|B Chain B, Crystal Structure Of The Narbomycin-Bound Pikc D50n Mutant
Length = 436
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 7/68 (10%)
Query: 279 DILTRFIELSEDPESNLTDKSLRDVVLNFVIAGRDTTATTLTWGVYMAMTHNHVAEKLYS 338
D+L+ + S++ S LT + L + ++AG +TT + G+Y ++H
Sbjct: 232 DLLSALVRTSDEDGSRLTSEELLGMAHILLVAGHETTVNLIANGMYALLSHP-------D 284
Query: 339 ELKAFEAD 346
+L A AD
Sbjct: 285 QLAALRAD 292
>pdb|2BVJ|A Chain A, Ligand-Free Structure Of Cytochrome P450 Pikc (Cyp107l1)
pdb|2BVJ|B Chain B, Ligand-Free Structure Of Cytochrome P450 Pikc (Cyp107l1)
pdb|2C6H|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2C6H|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2C7X|A Chain A, Crystal Structure Of Narbomycin-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CA0|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CA0|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CD8|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CD8|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
Length = 436
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 7/68 (10%)
Query: 279 DILTRFIELSEDPESNLTDKSLRDVVLNFVIAGRDTTATTLTWGVYMAMTHNHVAEKLYS 338
D+L+ + S++ S LT + L + ++AG +TT + G+Y ++H
Sbjct: 232 DLLSALVRTSDEDGSRLTSEELLGMAHILLVAGHETTVNLIANGMYALLSHP-------D 284
Query: 339 ELKAFEAD 346
+L A AD
Sbjct: 285 QLAALRAD 292
>pdb|3U52|C Chain C, X-Ray Crystal Structure Of Xenon-Pressurized Phenol
Hydroxylase From Pseudomonas Sp. Ox1
pdb|3U52|D Chain D, X-Ray Crystal Structure Of Xenon-Pressurized Phenol
Hydroxylase From Pseudomonas Sp. Ox1
Length = 333
Score = 30.0 bits (66), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 40/76 (52%), Gaps = 11/76 (14%)
Query: 252 FTYSVIKRRKAEIQEARETSDGTKIKYDILTRFIELSEDPESNLTD--KSLRDVVL---- 305
F Y +A++QE+ ETS G K ++LTR LSE+ + L LR V L
Sbjct: 79 FYYGAYVGNRAKMQESAETSFGFCEKRNLLTR---LSEETQKQLLRLLVPLRHVELGANM 135
Query: 306 -NFVIAGRDTTATTLT 320
N IAG D TATT++
Sbjct: 136 NNAKIAG-DATATTVS 150
>pdb|2INP|C Chain C, Structure Of The Phenol Hydroxylase-Regulatory Protein
Complex
pdb|2INP|D Chain D, Structure Of The Phenol Hydroxylase-Regulatory Protein
Complex
Length = 328
Score = 30.0 bits (66), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 40/76 (52%), Gaps = 11/76 (14%)
Query: 252 FTYSVIKRRKAEIQEARETSDGTKIKYDILTRFIELSEDPESNLTD--KSLRDVVL---- 305
F Y +A++QE+ ETS G K ++LTR LSE+ + L LR V L
Sbjct: 76 FYYGAYVGNRAKMQESAETSFGFCEKRNLLTR---LSEETQKQLLRLLVPLRHVELGANM 132
Query: 306 -NFVIAGRDTTATTLT 320
N IAG D TATT++
Sbjct: 133 NNAKIAG-DATATTVS 147
>pdb|1OTS|D Chain D, Structure Of The Escherichia Coli Clc Chloride Channel
And Fab Complex
pdb|1OTS|F Chain F, Structure Of The Escherichia Coli Clc Chloride Channel
And Fab Complex
pdb|1OTT|D Chain D, Structure Of The Escherichia Coli Clc Chloride Channel
E148a Mutant And Fab Complex
pdb|1OTT|F Chain F, Structure Of The Escherichia Coli Clc Chloride Channel
E148a Mutant And Fab Complex
pdb|1OTU|D Chain D, Structure Of The Escherichia Coli Clc Chloride Channel
E148q Mutant And Fab Complex
pdb|1OTU|F Chain F, Structure Of The Escherichia Coli Clc Chloride Channel
E148q Mutant And Fab Complex
pdb|2FEC|O Chain O, Structure Of The E203q Mutant Of The Cl-H+ EXCHANGER
CLC- Ec1 From E.Coli
pdb|2FEC|L Chain L, Structure Of The E203q Mutant Of The Cl-H+ EXCHANGER
CLC- Ec1 From E.Coli
pdb|2FED|D Chain D, Structure Of The E203q Mutant Of The Cl-H+ EXCHANGER
CLC- Ec1 From E.Coli
pdb|2FED|F Chain F, Structure Of The E203q Mutant Of The Cl-H+ EXCHANGER
CLC- Ec1 From E.Coli
pdb|2FEE|O Chain O, Structure Of The Cl-H+ EXCHANGER CLC-Ec1 From E.Coli In
Nabr
pdb|2FEE|L Chain L, Structure Of The Cl-H+ EXCHANGER CLC-Ec1 From E.Coli In
Nabr
pdb|2EXW|D Chain D, Crystal Structure Of A Ecclc-Fab Complex In The Absence
Of Bound Ions
pdb|2EXW|F Chain F, Crystal Structure Of A Ecclc-Fab Complex In The Absence
Of Bound Ions
pdb|2EXY|D Chain D, Crystal Structure Of The E148q Mutant Of Ecclc, Fab
Complexed In Absence Of Bound Ions
pdb|2EXY|F Chain F, Crystal Structure Of The E148q Mutant Of Ecclc, Fab
Complexed In Absence Of Bound Ions
pdb|2EZ0|D Chain D, Crystal Structure Of The S107aE148QY445A MUTANT OF
ECCLC, In Complex With A Fab Fragment
pdb|2EZ0|F Chain F, Crystal Structure Of The S107aE148QY445A MUTANT OF
ECCLC, In Complex With A Fab Fragment
pdb|2H2P|D Chain D, Crystal Structure Of Clc-Ec1 In Complex With Fab
Fragment In Secn-
pdb|2H2P|F Chain F, Crystal Structure Of Clc-Ec1 In Complex With Fab
Fragment In Secn-
pdb|2H2S|D Chain D, Crystal Structure Of E148a Mutant Of Clc-Ec1 In Secn-
pdb|2H2S|F Chain F, Crystal Structure Of E148a Mutant Of Clc-Ec1 In Secn-
pdb|2HLF|D Chain D, Structure Of The Escherichis Coli Clc Chloride Channel
Y445e Mutant And Fab Complex
pdb|2HLF|F Chain F, Structure Of The Escherichis Coli Clc Chloride Channel
Y445e Mutant And Fab Complex
pdb|2HT2|D Chain D, Structure Of The Escherichia Coli Clc Chloride Channel
Y445h Mutant And Fab Complex
pdb|2HT2|F Chain F, Structure Of The Escherichia Coli Clc Chloride Channel
Y445h Mutant And Fab Complex
pdb|2HT3|D Chain D, Structure Of The Escherichia Coli Clc Chloride Channel
Y445l Mutant And Fab Complex
pdb|2HT3|F Chain F, Structure Of The Escherichia Coli Clc Chloride Channel
Y445l Mutant And Fab Complex
pdb|2HT4|D Chain D, Structure Of The Escherichia Coli Clc Chloride Channel
Y445w Mutant And Fab Complex
pdb|2HT4|F Chain F, Structure Of The Escherichia Coli Clc Chloride Channel
Y445w Mutant And Fab Complex
pdb|2HTK|D Chain D, Structure Of The Escherichia Coli Clc Chloride Channel
Y445a Mutant And Fab Complex
pdb|2HTK|F Chain F, Structure Of The Escherichia Coli Clc Chloride Channel
Y445a Mutant And Fab Complex
pdb|2HTL|D Chain D, Structure Of The Escherichia Coli Clc Chloride Channel
Y445f Mutant And Fab Complex
pdb|2HTL|F Chain F, Structure Of The Escherichia Coli Clc Chloride Channel
Y445f Mutant And Fab Complex
pdb|2R9H|D Chain D, Crystal Structure Of Q207c Mutant Of Clc-Ec1 In Complex
With Fab
pdb|2R9H|F Chain F, Crystal Structure Of Q207c Mutant Of Clc-Ec1 In Complex
With Fab
pdb|3DET|D Chain D, Structure Of The E418a, Y445a Doubly Ungated Mutant Of
E.Coli Clc_ec1, Cl-H+ ANTIPORTER
pdb|3DET|F Chain F, Structure Of The E418a, Y445a Doubly Ungated Mutant Of
E.Coli Clc_ec1, Cl-H+ ANTIPORTER
pdb|3EJY|D Chain D, Structure Of E203h Mutant Of E.Coli Cl-H+ ANTIPORTER,
CLC- Ec1
pdb|3EJY|F Chain F, Structure Of E203h Mutant Of E.Coli Cl-H+ ANTIPORTER,
CLC- Ec1
pdb|3EJZ|D Chain D, Structure Of E203v Mutant E.Coli Cl-H+ EXCHANGER,
CLC-Ec1
pdb|3EJZ|F Chain F, Structure Of E203v Mutant E.Coli Cl-H+ EXCHANGER,
CLC-Ec1
pdb|4FG6|D Chain D, Structure Of Ecclc E148a Mutant In Glutamate
pdb|4FG6|F Chain F, Structure Of Ecclc E148a Mutant In Glutamate
pdb|4ENE|D Chain D, Structure Of The N- And C-Terminal Trimmed Clc-Ec1 Cl-H+
ANTIPORTER And Fab Complex
pdb|4ENE|F Chain F, Structure Of The N- And C-Terminal Trimmed Clc-Ec1 Cl-H+
ANTIPORTER And Fab Complex
Length = 211
Score = 30.0 bits (66), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 10/28 (35%), Positives = 16/28 (57%)
Query: 16 LMLACTVLSWILLIHWWSQKNQRGPKTW 43
+ + C+ S + IHW+ QK+ PK W
Sbjct: 19 VTMTCSASSSVSYIHWYQQKSGTSPKRW 46
>pdb|2FD6|L Chain L, Structure Of Human Urokinase Plasminogen Activator In
Complex With Urokinase Receptor And An Anti-Upar
Antibody At 1.9 A
Length = 214
Score = 30.0 bits (66), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 10/30 (33%), Positives = 17/30 (56%)
Query: 16 LMLACTVLSWILLIHWWSQKNQRGPKTWPF 45
+ + C+ S + +HW+ QK+ PK W F
Sbjct: 19 VTITCSASSSVSYMHWYQQKSGTSPKPWIF 48
>pdb|2RFB|A Chain A, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFB|B Chain B, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFB|C Chain C, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFC|A Chain A, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|B Chain B, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|C Chain C, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|D Chain D, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
Length = 343
Score = 30.0 bits (66), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 39/110 (35%), Gaps = 12/110 (10%)
Query: 390 AVITETLRLYPAVPQDPKGILEDDVLPDGTKVKAGGMVTYVPYSMGRMEYNWGPDAASFK 449
+ ETLR Y + P +D + K+K G V S R D F
Sbjct: 220 GFVEETLRYYSPIQFLPHRFAAEDSYINNKKIKKGDQVIVYLGSANR-------DETFFD 272
Query: 450 PERWLKDGVFQNASPFKFTAFQAGPRICLGKDSAYLQMKMALAILCRFFK 499
K G + AF G +CLG A L+ +AL + FK
Sbjct: 273 EPDLFKIGRRE-----MHLAFGIGIHMCLGAPLARLEASIALNDILNHFK 317
>pdb|2Z36|A Chain A, Crystal Structure Of Cytochrome P450 Moxa From Nonomuraea
Recticatena (Cyp105)
pdb|2Z36|B Chain B, Crystal Structure Of Cytochrome P450 Moxa From Nonomuraea
Recticatena (Cyp105)
Length = 413
Score = 30.0 bits (66), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 51/120 (42%), Gaps = 21/120 (17%)
Query: 412 DDVLPDGTKVKAGGMVTYVPYSMGRMEYNWGP----DAASFKPERWLKDGVFQNASPFKF 467
+DV G +KAG V SM + NW P D A ER +
Sbjct: 302 EDVEIGGVSIKAGEGVIV---SM--LSANWDPAVFKDPAVLDVERGAR----------HH 346
Query: 468 TAFQAGPRICLGKDSAYLQMKMALAILCRFF-KFKL-VPDHPVKYRMMTILSMEHGLKLT 525
AF GP CLG++ A +++++ L R +L VP V ++ +++ H L +T
Sbjct: 347 LAFGFGPHQCLGQNLARMELQIVFDTLFRRIPSLRLAVPMEDVPFKGDSVIYGVHELPVT 406
>pdb|2FAT|L Chain L, An Anti-Urokinase Plasminogen Activator Receptor (Upar)
Antibody: Crystal Structure And Binding Epitope
pdb|3BT2|L Chain L, Structure Of Urokinase Receptor, Urokinase And
Vitronectin Complex
Length = 212
Score = 30.0 bits (66), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 10/30 (33%), Positives = 17/30 (56%)
Query: 16 LMLACTVLSWILLIHWWSQKNQRGPKTWPF 45
+ + C+ S + +HW+ QK+ PK W F
Sbjct: 19 VTITCSASSSVSYMHWYQQKSGTSPKPWIF 48
>pdb|1EO8|L Chain L, Influenza Virus Hemagglutinin Complexed With A
Neutralizing Antibody
Length = 210
Score = 29.6 bits (65), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 10/28 (35%), Positives = 16/28 (57%)
Query: 16 LMLACTVLSWILLIHWWSQKNQRGPKTW 43
+ + C+ S I +HW+ QK+ PK W
Sbjct: 19 VTMTCSASSDISYMHWYQQKSDTSPKIW 46
>pdb|1CLO|L Chain L, Anti-Carcinoembryonic Antigen Monoclonal Antibody A5b7
Length = 213
Score = 29.6 bits (65), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 10/28 (35%), Positives = 15/28 (53%)
Query: 16 LMLACTVLSWILLIHWWSQKNQRGPKTW 43
+ + C S + IHW+ QK PK+W
Sbjct: 19 VTMTCRASSSVTYIHWYQQKPGSSPKSW 46
>pdb|1YDU|A Chain A, Solution Nmr Structure Of At5g01610, An Arabidopsis
Thaliana Protein Containing Duf538 Domain
Length = 170
Score = 29.6 bits (65), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 36/97 (37%), Gaps = 24/97 (24%)
Query: 118 DGIFNVDGELWRKQRKTASFEFASKNLRDFSTKV----------------------FREY 155
D IFN G W Q+ F+ +L ST + +EY
Sbjct: 2 DQIFNKVGSYWLGQKANKQFDSVGNDLNSVSTSIEGGTKWLVNKIKGKMQKPLPELLKEY 61
Query: 156 SLKLSSILTQASCHNQEIDMQELLMRMTLDSICKVGF 192
L + A+ N E D + + + + SIC+VG+
Sbjct: 62 DLPIGIFPGDAT--NYEFDEETKKLTVLIPSICEVGY 96
>pdb|2X5L|A Chain A, X-Ray Structure Of The Substrate-Free Mycobacterium
Tuberculosis Cytochrome P450 Cyp125, Alternative Crystal
Form
Length = 431
Score = 29.6 bits (65), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 51/118 (43%), Gaps = 24/118 (20%)
Query: 279 DILTRFIELSEDPESNLTDKSLRDVVLNFVIAGRDTTATTLTWGVYMAMTHNHVAEKLYS 338
DI+T+ I+ D E L+D V+ +AG +TT ++T G+ MA + +LY
Sbjct: 236 DIVTQLIQADIDGEK-LSDDEFGFFVVMLAVAGNETTRNSITQGM-MAFAEHPDQWELYK 293
Query: 339 ELK----------------AFEADRAKEEKASLVQYDKEDLESFNQRVTQFAGLLNYD 380
+++ AF+ ++ + S VQ K QRV F N+D
Sbjct: 294 KVRPETAADEIVRWATPVTAFQRTALRDYELSGVQIKK------GQRVVMFYRSANFD 345
>pdb|2XC3|A Chain A, X-Ray Structure Of Mycobacterium Tuberculosis Cyp125 Bound
To The Reverse Type I Inhibitor
Length = 424
Score = 29.3 bits (64), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 51/118 (43%), Gaps = 24/118 (20%)
Query: 279 DILTRFIELSEDPESNLTDKSLRDVVLNFVIAGRDTTATTLTWGVYMAMTHNHVAEKLYS 338
DI+T+ I+ D E L+D V+ +AG +TT ++T G+ MA + +LY
Sbjct: 229 DIVTQLIQADIDGEK-LSDDEFGFFVVMLAVAGNETTRNSITQGM-MAFAEHPDQWELYK 286
Query: 339 ELK----------------AFEADRAKEEKASLVQYDKEDLESFNQRVTQFAGLLNYD 380
+++ AF+ ++ + S VQ K QRV F N+D
Sbjct: 287 KVRPETAADEIVRWATPVTAFQRTALRDYELSGVQIKK------GQRVVMFYRSANFD 338
>pdb|3IVY|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cytochrome
P450 Cyp125, P212121 Crystal Form
pdb|3IW0|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cytochrome
P450 Cyp125, C2221 Crystal Form
pdb|3IW1|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cytochrome
P450 Cyp125 In Complex With Androstenedione
pdb|3IW2|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cytochrome
P450 Cyp125 In Complex With Econazole
Length = 433
Score = 29.3 bits (64), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 51/118 (43%), Gaps = 24/118 (20%)
Query: 279 DILTRFIELSEDPESNLTDKSLRDVVLNFVIAGRDTTATTLTWGVYMAMTHNHVAEKLYS 338
DI+T+ I+ D E L+D V+ +AG +TT ++T G+ MA + +LY
Sbjct: 238 DIVTQLIQADIDGEK-LSDDEFGFFVVMLAVAGNETTRNSITQGM-MAFAEHPDQWELYK 295
Query: 339 ELK----------------AFEADRAKEEKASLVQYDKEDLESFNQRVTQFAGLLNYD 380
+++ AF+ ++ + S VQ K QRV F N+D
Sbjct: 296 KVRPETAADEIVRWATPVTAFQRTALRDYELSGVQIKK------GQRVVMFYRSANFD 347
>pdb|4F33|A Chain A, Crystal Structure Of Therapeutic Antibody Morab-009
pdb|4F33|C Chain C, Crystal Structure Of Therapeutic Antibody Morab-009
pdb|4F33|E Chain E, Crystal Structure Of Therapeutic Antibody Morab-009
pdb|4F33|G Chain G, Crystal Structure Of Therapeutic Antibody Morab-009
pdb|4F3F|A Chain A, Crystal Structure Of Msln7-64 Morab-009 Fab Complex
Length = 213
Score = 29.3 bits (64), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 9/28 (32%), Positives = 16/28 (57%)
Query: 16 LMLACTVLSWILLIHWWSQKNQRGPKTW 43
+ + C+ S + +HW+ QK+ PK W
Sbjct: 19 VTMTCSASSSVSYMHWYQQKSGTSPKRW 46
>pdb|2XN8|A Chain A, X-Ray Structure Of The Substrate-Free Mycobacterium
Tuberculosis Cytochrome P450 Cyp125
Length = 423
Score = 29.3 bits (64), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 51/118 (43%), Gaps = 24/118 (20%)
Query: 279 DILTRFIELSEDPESNLTDKSLRDVVLNFVIAGRDTTATTLTWGVYMAMTHNHVAEKLYS 338
DI+T+ I+ D E L+D V+ +AG +TT ++T G+ MA + +LY
Sbjct: 228 DIVTQLIQADIDGEK-LSDDEFGFFVVMLAVAGNETTRNSITQGM-MAFAEHPDQWELYK 285
Query: 339 ELK----------------AFEADRAKEEKASLVQYDKEDLESFNQRVTQFAGLLNYD 380
+++ AF+ ++ + S VQ K QRV F N+D
Sbjct: 286 KVRPETAADEIVRWATPVTAFQRTALRDYELSGVQIKK------GQRVVMFYRSANFD 337
>pdb|2X5W|A Chain A, X-Ray Structure Of Mycobacterium Tuberculosis Cytochrome
P450 Cyp125 In Complex With Substrate Cholest-4-En-3-One
Length = 440
Score = 29.3 bits (64), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 51/118 (43%), Gaps = 24/118 (20%)
Query: 279 DILTRFIELSEDPESNLTDKSLRDVVLNFVIAGRDTTATTLTWGVYMAMTHNHVAEKLYS 338
DI+T+ I+ D E L+D V+ +AG +TT ++T G+ MA + +LY
Sbjct: 245 DIVTQLIQADIDGEK-LSDDEFGFFVVMLAVAGNETTRNSITQGM-MAFAEHPDQWELYK 302
Query: 339 ELK----------------AFEADRAKEEKASLVQYDKEDLESFNQRVTQFAGLLNYD 380
+++ AF+ ++ + S VQ K QRV F N+D
Sbjct: 303 KVRPETAADEIVRWATPVTAFQRTALRDYELSGVQIKK------GQRVVMFYRSANFD 354
>pdb|3O11|L Chain L, Anti-Beta-Amyloid Antibody C706 Fab In Space Group C2
pdb|3O11|A Chain A, Anti-Beta-Amyloid Antibody C706 Fab In Space Group C2
Length = 212
Score = 29.3 bits (64), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 9/28 (32%), Positives = 16/28 (57%)
Query: 16 LMLACTVLSWILLIHWWSQKNQRGPKTW 43
+ + C+ S + +HW+ QK+ PK W
Sbjct: 19 VTMTCSASSSVSYMHWYQQKSGTSPKRW 46
>pdb|3MCL|L Chain L, Anti-Beta-Amyloid Antibody C706 Fab In Space Group P21
Length = 212
Score = 29.3 bits (64), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 9/28 (32%), Positives = 16/28 (57%)
Query: 16 LMLACTVLSWILLIHWWSQKNQRGPKTW 43
+ + C+ S + +HW+ QK+ PK W
Sbjct: 19 VTMTCSASSSVSYMHWYQQKSGTSPKRW 46
>pdb|2W9D|L Chain L, Structure Of Fab Fragment Of The Icsm 18 - Anti-Prp
Therapeutic Antibody At 1.57 A Resolution
Length = 212
Score = 28.9 bits (63), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 9/28 (32%), Positives = 16/28 (57%)
Query: 16 LMLACTVLSWILLIHWWSQKNQRGPKTW 43
+ + C+ S + +HW+ QK+ PK W
Sbjct: 19 VTMTCSASSSVSYMHWYQQKSGTSPKRW 46
>pdb|2W9E|L Chain L, Structure Of Icsm 18 (Anti-Prp Therapeutic Antibody) Fab
Fragment Complexed With Human Prp Fragment 119-231
Length = 212
Score = 28.9 bits (63), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 9/28 (32%), Positives = 16/28 (57%)
Query: 16 LMLACTVLSWILLIHWWSQKNQRGPKTW 43
+ + C+ S + +HW+ QK+ PK W
Sbjct: 19 VTMTCSASSSVSYMHWYQQKSGTSPKRW 46
>pdb|4APY|A Chain A, Ethylene Glycol-bound Form Of P450 Cyp125a3 From
Mycobacterium Smegmatis
Length = 433
Score = 28.9 bits (63), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 279 DILTRFIELSEDPESNLTDKSLRDVVLNFVIAGRDTTATTLTWGVYMAMTHNHVAEKLY 337
DI+T+ IE D E L+D V+ +AG +TT ++T G+ +A N +LY
Sbjct: 221 DIVTKLIEADIDGE-KLSDDEFGFFVVMLAVAGNETTRNSITHGM-IAFAQNPDQWELY 277
>pdb|3S62|L Chain L, Structure Of Fab Fragment Of Malaria Transmission
Blocking Antibody 2a8 Against P. Vivax P25 Protein
Length = 213
Score = 28.9 bits (63), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 9/28 (32%), Positives = 16/28 (57%)
Query: 16 LMLACTVLSWILLIHWWSQKNQRGPKTW 43
+ + C+ S + +HW+ QK+ PK W
Sbjct: 19 VTMTCSASSSVSYMHWYQQKSGTSPKRW 46
>pdb|4I9W|D Chain D, Human Two Pore Domain K+ Channel Traak (k2p4.1) - Fab
Complex Structure
pdb|4I9W|F Chain F, Human Two Pore Domain K+ Channel Traak (k2p4.1) - Fab
Complex Structure
Length = 211
Score = 28.9 bits (63), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 9/28 (32%), Positives = 16/28 (57%)
Query: 16 LMLACTVLSWILLIHWWSQKNQRGPKTW 43
+ + C+ S + +HW+ QK+ PK W
Sbjct: 19 VTMTCSASSSVSYMHWYQQKSGTSPKRW 46
>pdb|1E6J|L Chain L, Crystal Structure Of Hiv-1 Capsid Protein (P24) In
Complex With Fab13b5
Length = 210
Score = 28.9 bits (63), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 9/28 (32%), Positives = 16/28 (57%)
Query: 16 LMLACTVLSWILLIHWWSQKNQRGPKTW 43
+ + C+ S + +HW+ QK+ PK W
Sbjct: 19 VTITCSASSSVSYMHWYQQKSGTSPKPW 46
>pdb|3IXX|H Chain H, The Pseudo-Atomic Structure Of West Nile Immature Virus
In Complex With Fab Fragments Of The Anti-Fusion Loop
Antibody E53
pdb|3IXX|J Chain J, The Pseudo-Atomic Structure Of West Nile Immature Virus
In Complex With Fab Fragments Of The Anti-Fusion Loop
Antibody E53
pdb|3IXY|H Chain H, The Pseudo-Atomic Structure Of Dengue Immature Virus In
Complex With Fab Fragments Of The Anti-Fusion Loop
Antibody E53
pdb|3IXY|J Chain J, The Pseudo-Atomic Structure Of Dengue Immature Virus In
Complex With Fab Fragments Of The Anti-Fusion Loop
Antibody E53
Length = 215
Score = 28.9 bits (63), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 9/28 (32%), Positives = 16/28 (57%)
Query: 16 LMLACTVLSWILLIHWWSQKNQRGPKTW 43
+ + C+ S + +HW+ QK+ PK W
Sbjct: 19 VTMTCSASSSVSYMHWYQQKSGTSPKIW 46
>pdb|1E6O|L Chain L, Crystal Structure Of Fab13b5 Against Hiv-1 Capsid
Protein P24
Length = 212
Score = 28.9 bits (63), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 9/28 (32%), Positives = 16/28 (57%)
Query: 16 LMLACTVLSWILLIHWWSQKNQRGPKTW 43
+ + C+ S + +HW+ QK+ PK W
Sbjct: 19 VTITCSASSSVSYMHWYQQKSGTSPKPW 46
>pdb|3I50|L Chain L, Crystal Structure Of The West Nile Virus Envelope
Glycoprotein In Complex With The E53 Antibody Fab
Length = 207
Score = 28.9 bits (63), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 9/28 (32%), Positives = 16/28 (57%)
Query: 16 LMLACTVLSWILLIHWWSQKNQRGPKTW 43
+ + C+ S + +HW+ QK+ PK W
Sbjct: 19 VTMTCSASSSVSYMHWYQQKSGTSPKIW 46
>pdb|3NCY|W Chain W, X-Ray Crystal Structure Of An Arginine Agmatine
Antiporter (Adic) In Complex With A Fab Fragment
pdb|3NCY|S Chain S, X-Ray Crystal Structure Of An Arginine Agmatine
Antiporter (Adic) In Complex With A Fab Fragment
Length = 211
Score = 28.5 bits (62), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 9/28 (32%), Positives = 16/28 (57%)
Query: 16 LMLACTVLSWILLIHWWSQKNQRGPKTW 43
+ + C+ S + +HW+ QK+ PK W
Sbjct: 19 VTMTCSASSSVNYMHWYQQKSGTSPKRW 46
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.136 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,651,045
Number of Sequences: 62578
Number of extensions: 652621
Number of successful extensions: 1870
Number of sequences better than 100.0: 151
Number of HSP's better than 100.0 without gapping: 122
Number of HSP's successfully gapped in prelim test: 29
Number of HSP's that attempted gapping in prelim test: 1569
Number of HSP's gapped (non-prelim): 182
length of query: 530
length of database: 14,973,337
effective HSP length: 103
effective length of query: 427
effective length of database: 8,527,803
effective search space: 3641371881
effective search space used: 3641371881
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 54 (25.4 bits)